BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (460 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteria... 934 0.0 UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteria... 790 0.0 UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID... 343 9e-93 UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 318 2e-85 UniRef50_A4VFG3 GGDEF domain protein n=5 Tax=Proteobacteria RepI... 315 3e-84 UniRef50_B5Y2I5 Diguanylate cyclase n=6 Tax=Enterobacteriaceae R... 308 4e-82 UniRef50_B7LMM6 Putative uncharacterized protein n=3 Tax=Enterob... 304 4e-81 UniRef50_C1DFY2 GGDEF domain protein n=4 Tax=Gammaproteobacteria... 300 6e-80 UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthrop... 296 1e-78 UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 293 1e-77 UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 281 3e-74 UniRef50_D0SV00 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 265 2e-69 UniRef50_C6RKE1 Diguanylate cyclase n=2 Tax=Acinetobacter radior... 253 1e-65 UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter di... 234 4e-60 UniRef50_B8KHV5 Ggdef domain protein n=1 Tax=gamma proteobacteri... 215 3e-54 UniRef50_B6JHB4 Putative ggdef family protein n=1 Tax=Oligotroph... 194 7e-48 UniRef50_A0L865 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 191 6e-47 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 144 5e-33 UniRef50_O66623 Putative uncharacterized protein n=1 Tax=Aquifex... 143 1e-32 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 138 5e-31 UniRef50_Q2RR54 Putative diguanylate cyclase (GGDEF domain) n=2 ... 137 1e-30 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 137 1e-30 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 136 2e-30 UniRef50_B5YAI5 Response regulator n=2 Tax=Dictyoglomus RepID=B5... 136 2e-30 UniRef50_C5RGU1 Diguanylate cyclase with TPR repeats n=1 Tax=Clo... 136 2e-30 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 135 4e-30 UniRef50_C1ZLY6 Diguanylate cyclase (GGDEF) domain-containing pr... 134 6e-30 UniRef50_A3DDM3 Diguanylate cyclase n=3 Tax=Clostridium thermoce... 134 7e-30 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 134 7e-30 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 134 8e-30 UniRef50_C1XM61 Diguanylate cyclase (GGDEF) domain-containing pr... 133 1e-29 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 133 1e-29 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 133 1e-29 UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Nep... 133 1e-29 UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 132 2e-29 UniRef50_C1DVZ5 Ggdef domain protein n=1 Tax=Sulfurihydrogenibiu... 132 2e-29 UniRef50_C0QHN1 Putative diguanylate cyclase (GGDEF domain prote... 132 3e-29 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 132 3e-29 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 132 3e-29 UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 R... 131 4e-29 UniRef50_A1K902 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 131 5e-29 UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 131 7e-29 UniRef50_A8TN49 Putative uncharacterized protein n=1 Tax=alpha p... 130 8e-29 UniRef50_C6C1P7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 130 9e-29 UniRef50_B8DPR2 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgar... 130 9e-29 UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydroge... 130 1e-28 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 130 1e-28 UniRef50_C1SP05 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 130 1e-28 UniRef50_UPI0000E0E9F1 PleD-like protein n=1 Tax=Rhodobacterales... 129 2e-28 UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfoc... 129 2e-28 UniRef50_Q2YBC6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitro... 129 2e-28 UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydroge... 129 2e-28 UniRef50_A6DBG2 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 129 2e-28 UniRef50_C9YAH7 Putative uncharacterized protein n=1 Tax=Curviba... 129 2e-28 UniRef50_C9YCE2 Putative uncharacterized protein n=1 Tax=Curviba... 129 2e-28 UniRef50_Q314F9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desul... 129 2e-28 UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 129 2e-28 UniRef50_Q3A583 Diguanylate cyclase n=1 Tax=Pelobacter carbinoli... 129 3e-28 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 129 3e-28 UniRef50_A6LJN4 Response regulator receiver modulated diguanylat... 129 3e-28 UniRef50_D0LH79 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 129 3e-28 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 128 4e-28 UniRef50_A1AK83 Response regulator receiver modulated diguanylat... 128 4e-28 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 128 4e-28 UniRef50_Q1NSC4 GGDEF:GAF n=2 Tax=delta proteobacterium MLMS-1 R... 128 4e-28 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 128 5e-28 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 128 5e-28 UniRef50_A1SY47 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 128 5e-28 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 128 5e-28 UniRef50_D0KW85 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ha... 128 5e-28 UniRef50_A0Q289 GGDEF domain protein, putative n=2 Tax=Clostridi... 128 5e-28 UniRef50_A4J801 Diguanylate cyclase n=1 Tax=Desulfotomaculum red... 128 6e-28 UniRef50_C0QTH1 Signal transduction response regulator n=1 Tax=P... 128 6e-28 UniRef50_C4V482 Possible diguanylate cyclase n=2 Tax=Selenomonas... 128 6e-28 UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 127 6e-28 UniRef50_B6BJ77 Signal transduction response regulator-chey like... 127 7e-28 UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas Rep... 127 7e-28 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 127 8e-28 UniRef50_Q15YR5 Diguanylate cyclase n=1 Tax=Pseudoalteromonas at... 127 8e-28 UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curviba... 127 8e-28 UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 127 9e-28 UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium... 127 9e-28 UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinog... 127 9e-28 UniRef50_C0QS84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 127 9e-28 UniRef50_Q315M6 Diguanylate cyclase n=1 Tax=Desulfovibrio desulf... 127 1e-27 UniRef50_Q7P127 Putative uncharacterized protein n=1 Tax=Chromob... 126 1e-27 UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingo... 126 2e-27 UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas camp... 126 2e-27 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 126 2e-27 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 126 2e-27 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 126 2e-27 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 126 2e-27 UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerob... 126 2e-27 UniRef50_D0KZW3 Response regulator receiver modulated diguanylat... 125 2e-27 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 125 2e-27 UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thala... 125 2e-27 UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquific... 125 2e-27 UniRef50_B9ZND9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 125 2e-27 UniRef50_C6HZW1 Diguanylate cyclase/phosphodiesterase with PAS/P... 125 3e-27 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 125 4e-27 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 125 4e-27 UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 125 4e-27 UniRef50_Q1D817 HAMP domain/GAF domain/GGDEF domain protein n=3 ... 125 4e-27 UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 125 4e-27 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 125 4e-27 UniRef50_A9B0R4 Diguanylate cyclase n=1 Tax=Herpetosiphon aurant... 125 4e-27 UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Pers... 125 5e-27 UniRef50_A1HRZ7 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 124 5e-27 UniRef50_C6MGF9 Diguanylate cyclase n=1 Tax=Nitrosomonas sp. AL2... 124 6e-27 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 124 6e-27 UniRef50_D0KF92 Diguanylate cyclase n=1 Tax=Pectobacterium wasab... 124 6e-27 UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (... 124 6e-27 UniRef50_A8MF63 Diguanylate cyclase n=1 Tax=Alkaliphilus oremlan... 124 6e-27 UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG8... 124 6e-27 UniRef50_C1D269 Putative metal dependent phosphohydrolase n=2 Ta... 124 6e-27 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 124 6e-27 UniRef50_B6ESF0 Membrane associated GGDEF protein n=1 Tax=Aliivi... 124 6e-27 UniRef50_A5N950 Predicted signal transduction protein containing... 124 6e-27 UniRef50_UPI00016982CA diguanylate cyclase n=1 Tax=Endoriftia pe... 124 7e-27 UniRef50_B9L5N3 Ggdef domain protein n=1 Tax=Nautilia profundico... 124 7e-27 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 124 7e-27 UniRef50_B8KPY0 Sensory box/ggdef domain protein n=1 Tax=gamma p... 124 7e-27 UniRef50_A6Q580 Putative uncharacterized protein n=1 Tax=Nitrati... 124 7e-27 UniRef50_C6MLU9 Response regulator receiver modulated diguanylat... 124 7e-27 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 124 7e-27 UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepI... 124 8e-27 UniRef50_Q1D1X1 FHA/GGDEF domain protein n=2 Tax=Cystobacterinea... 124 8e-27 UniRef50_C1DCC5 GGDEF domain protein n=1 Tax=Laribacter hongkong... 124 8e-27 UniRef50_C6NTI5 Response regulator/GGDEF domain protein n=1 Tax=... 124 9e-27 UniRef50_C6MBM6 Diguanylate cyclase n=1 Tax=Nitrosomonas sp. AL2... 124 9e-27 UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 124 9e-27 UniRef50_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicau... 124 9e-27 UniRef50_C6MBI8 Diguanylate cyclase with GAF sensor n=1 Tax=Nitr... 124 9e-27 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 124 1e-26 UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacte... 124 1e-26 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 124 1e-26 UniRef50_B7RWX6 GGDEF domain protein n=1 Tax=marine gamma proteo... 124 1e-26 UniRef50_Q30UV1 Diguanylate cyclase n=1 Tax=Desulfovibrio desulf... 123 1e-26 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 123 1e-26 UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelo... 123 1e-26 UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 123 1e-26 UniRef50_C5T761 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 123 1e-26 UniRef50_Q1GSG4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 123 1e-26 UniRef50_B0UQC5 Diguanylate cyclase n=1 Tax=Methylobacterium sp.... 123 2e-26 UniRef50_B8GME9 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 123 2e-26 UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria ... 123 2e-26 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 123 2e-26 UniRef50_Q1QVZ7 Diguanylate cyclase with PAS/PAC and GAF sensors... 123 2e-26 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 123 2e-26 UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Rals... 122 2e-26 UniRef50_C3K054 Putative GGDEF/GAF domain sensory box protein n=... 122 2e-26 UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrery... 122 2e-26 UniRef50_B9M9A9 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32... 122 2e-26 UniRef50_A6F347 GGDEF domain-like protein n=1 Tax=Marinobacter a... 122 2e-26 UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuni... 122 2e-26 UniRef50_A6Q482 Putative uncharacterized protein n=1 Tax=Nitrati... 122 2e-26 UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 122 2e-26 UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 122 2e-26 UniRef50_Q9A5I5 Diguanylate cyclase n=76 Tax=Alphaproteobacteria... 122 2e-26 UniRef50_Q47MR9 GGDEF n=2 Tax=Streptosporangineae RepID=Q47MR9_T... 122 3e-26 UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomac... 122 3e-26 UniRef50_B4SM08 Diguanylate cyclase n=13 Tax=Xanthomonadaceae Re... 122 3e-26 UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobact... 122 3e-26 UniRef50_B5EHL1 Diguanylate cyclase n=7 Tax=Geobacter RepID=B5EH... 122 3e-26 UniRef50_C6XL77 Response regulator receiver modulated diguanylat... 122 3e-26 UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 122 3e-26 UniRef50_B7IH39 Diguanylate cyclase n=2 Tax=Bacteria RepID=B7IH3... 122 4e-26 UniRef50_A7GXF8 3-deoxy-d-manno-octulosonic-acid transferase n=8... 122 4e-26 UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 122 4e-26 UniRef50_Q083J4 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 121 4e-26 UniRef50_Q2W491 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 121 5e-26 UniRef50_C7RS34 Diguanylate cyclase n=1 Tax=Candidatus Accumulib... 121 5e-26 UniRef50_B6BKL4 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 121 5e-26 UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n... 121 5e-26 UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL19... 121 5e-26 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 121 5e-26 UniRef50_A6VUN1 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 121 5e-26 UniRef50_C5T8S9 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 121 6e-26 UniRef50_A6LZP4 Diguanylate cyclase n=1 Tax=Clostridium beijerin... 121 6e-26 UniRef50_Q314H8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 121 6e-26 UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Hermini... 121 6e-26 UniRef50_A9BT74 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID... 121 6e-26 UniRef50_C1D6E2 GGDEF domain protein n=1 Tax=Laribacter hongkong... 121 7e-26 UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing pr... 120 7e-26 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 120 8e-26 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 120 8e-26 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 120 8e-26 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 120 9e-26 UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 120 9e-26 UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgar... 120 9e-26 UniRef50_Q31IH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 120 9e-26 UniRef50_Q2SD41 Response regulator containing a CheY-like receiv... 120 1e-25 UniRef50_B5JTF6 Signaling protein with membrane-bound sensor dom... 120 1e-25 UniRef50_A6GKD7 FHA/GGDEF domain protein n=1 Tax=Plesiocystis pa... 120 1e-25 UniRef50_C6DKF8 Diguanylate cyclase n=5 Tax=Pectobacterium RepID... 120 1e-25 UniRef50_D2L189 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW... 120 1e-25 UniRef50_UPI0001C31F17 diguanylate cyclase n=1 Tax=Conexibacter ... 120 1e-25 UniRef50_A8UVA1 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 120 1e-25 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 120 1e-25 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 1e-25 UniRef50_A4J4S9 Response regulator receiver modulated diguanylat... 120 1e-25 UniRef50_A0L6R6 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 120 1e-25 UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 1e-25 UniRef50_B3EBA5 Diguanylate cyclase n=2 Tax=Desulfuromonadales R... 120 1e-25 UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 120 1e-25 UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulo... 120 1e-25 UniRef50_Q2JCX5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Frank... 120 1e-25 UniRef50_C1CX77 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 120 1e-25 UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=... 120 1e-25 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 1e-25 UniRef50_Q98C19 Mlr5331 protein n=1 Tax=Mesorhizobium loti RepID... 120 1e-25 UniRef50_B8FAT3 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 120 1e-25 UniRef50_Q47HY8 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 120 1e-25 UniRef50_Q0G665 Periplasmic sensor diguanylate cyclase (GGDEF) n... 120 1e-25 UniRef50_A6D653 PAS:GGDEF n=1 Tax=Vibrio shilonii AK1 RepID=A6D6... 120 1e-25 UniRef50_A6EXZ6 Diguanylate cyclase n=1 Tax=Marinobacter algicol... 120 1e-25 UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 119 2e-25 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 119 2e-25 UniRef50_C1SP72 Diguanylate cyclase (GGDEF) domain-containing pr... 119 2e-25 UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidami... 119 2e-25 UniRef50_B9Z8H8 Diguanylate cyclase with GAF sensor n=1 Tax=Luti... 119 2e-25 UniRef50_C9R9C2 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 119 2e-25 UniRef50_D2QYB7 Response regulator receiver modulated diguanylat... 119 2e-25 UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus... 119 2e-25 UniRef50_C6DJJ8 Diguanylate cyclase n=1 Tax=Pectobacterium carot... 119 2e-25 UniRef50_B3PFT6 AbfX GGDEF domain protein n=1 Tax=Cellvibrio jap... 119 2e-25 UniRef50_A8GZ56 Diguanylate cyclase n=3 Tax=Alteromonadales RepI... 119 2e-25 UniRef50_B8GMH9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 119 2e-25 UniRef50_B9Z1A1 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 119 2e-25 UniRef50_B8FB82 Response regulator receiver modulated diguanylat... 119 2e-25 UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 119 2e-25 UniRef50_B8DNJ7 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgar... 119 2e-25 UniRef50_C0GMG6 Diguanylate cyclase n=1 Tax=Desulfonatronospira ... 119 2e-25 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 119 2e-25 UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 119 2e-25 UniRef50_Q21JZ6 GGDEF domain n=2 Tax=Alteromonadales RepID=Q21JZ... 119 2e-25 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 119 2e-25 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 119 2e-25 UniRef50_A8EV29 EAL/GGDEF domain protein n=2 Tax=Campylobacteral... 119 2e-25 UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acid... 119 2e-25 UniRef50_Q30QE3 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 119 2e-25 UniRef50_A9BVC7 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 119 2e-25 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 119 3e-25 UniRef50_A3Y705 GGDEF domain protein n=2 Tax=Oceanospirillaceae ... 119 3e-25 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 119 3e-25 UniRef50_Q7NSG5 Putative uncharacterized protein n=1 Tax=Chromob... 119 3e-25 UniRef50_A9FTU9 Putative membrane protein (GAF and GGDEF domain)... 119 3e-25 UniRef50_C8W0S4 Diguanylate cyclase n=1 Tax=Desulfotomaculum ace... 119 3e-25 UniRef50_C8X1R3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 119 3e-25 UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9... 119 3e-25 >UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteriaceae RepID=YDDV_SHIBS Length = 460 Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/460 (99%), Positives = 459/460 (99%) Query: 1 MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ 60 MEMYFKRMKDEWTGLVEQADP IRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ Sbjct: 1 MEMYFKRMKDEWTGLVEQADPLIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ 60 Query: 61 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY Sbjct: 61 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 Query: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE Sbjct: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 Query: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR Sbjct: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL Sbjct: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF Sbjct: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI Sbjct: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL Sbjct: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 >UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteriaceae RepID=D2TII3_CITRO Length = 460 Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/459 (82%), Positives = 419/459 (91%) Query: 1 MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ 60 MEMY KRMKDEW LVEQ DP IR A+EIA HAH LSIEFYRIV DPHAEEFLSNEQ Sbjct: 1 MEMYLKRMKDEWVTLVEQTDPQIRRLASEIATRHAHDLSIEFYRIVLADPHAEEFLSNEQ 60 Query: 61 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 VERQLK A+E+WI++VLS+ V+DVERLI++QHTVAEVHARIGIPVE+VEMGFRVLKK+LY Sbjct: 61 VERQLKHALEKWIVDVLSSGVEDVERLIKVQHTVAEVHARIGIPVELVEMGFRVLKKLLY 120 Query: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 P+I + A +KL +YHFSINSID+AMEVM+RAF+FS+SSA+KEDENYRIFSLLENAEE Sbjct: 121 PIIIDGHHDANDKLLIYHFSINSIDLAMEVMSRAFSFSESSAAKEDENYRIFSLLENAEE 180 Query: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 EKERQIAS+LSWE+DIIYKI+LD+D G+SLPLSQADFGLWFNHKGRHYFSGIAEVGHISR Sbjct: 181 EKERQIASLLSWEMDIIYKIMLDADFGNSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 LIQDFDG+F Q+ + L+N++ RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL Sbjct: 241 LIQDFDGLFLQSRETAKALSNKAARVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 TKLLNRRFLPTIFKREIAHANR GTPLS+LIIDVDKFKEINDTWGHNTGDEILR+VSQAF Sbjct: 301 TKLLNRRFLPTIFKREIAHANRAGTPLSILIIDVDKFKEINDTWGHNTGDEILRRVSQAF 360 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 YDNVRSSDYVFRYGGDEFIIVLTEA++ +TLR AERIR RVEKTK+K+ +G I LSLSI Sbjct: 361 YDNVRSSDYVFRYGGDEFIIVLTEATQADTLRIAERIRLRVEKTKIKSPDGATIPLSLSI 420 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 GAAMFNGHPDYERLIQIADEALY AKR+GRNRVELW + Sbjct: 421 GAAMFNGHPDYERLIQIADEALYTAKRQGRNRVELWSPA 459 >UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID=C6D9C2_PECCP Length = 471 Score = 343 bits (880), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 184/451 (40%), Positives = 273/451 (60%), Gaps = 2/451 (0%) Query: 4 YFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVER 63 Y + + EWT L+ I+ A + +FY + D A FLS++QV Sbjct: 18 YNQVITSEWTQLIATTSQKSFNLLRAISEQKASDFADKFYSYMLKDQEASLFLSSQQVHD 77 Query: 64 QLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVI 123 +L +M +WI ++L+ + + LI Q + ++HARIGIPV++VE G R LK LY I Sbjct: 78 RLHGSMSKWIADILTNTGEHLVDLINHQKKIGQIHARIGIPVDLVERGARRLKWHLYEDI 137 Query: 124 FSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKE 183 A F+ S+DIA+E+M++ ++ S A+K +E+YR+FS+LENA E+E Sbjct: 138 AQVAEDKALCFDAMRFASISMDIAIEIMSKTYSQSHDLAAKNEESYRLFSILENASMERE 197 Query: 184 RQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQ 243 RQ AS+L+WE I+ + + L S LS ++FGLWFNHKG+ FS I + I+ +I Sbjct: 198 RQNASLLNWENAFIFSVATGTPLSSIQDLSDSEFGLWFNHKGKSSFSNIQGIRTIASIIT 257 Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKL 303 + D +T L + L +R+ + +I LL LF+EV + E G D LT L Sbjct: 258 ETDEYIRG--YSTTALLTQQDYAPLLKAVRSKIYKINMLLGSLFDEVQKLESGKDTLTLL 315 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 LNRRFLPTI + EI+ A + TPLS+ +ID+D FK +NDT+GH GD IL+++++ Y++ Sbjct: 316 LNRRFLPTILRHEISLAMHSSTPLSIAMIDIDHFKTVNDTYGHAAGDNILKRIAEVLYES 375 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 R+SDYVFRYGG+EF+IVL E + ER+R +++ + NGE I +++S G A Sbjct: 376 TRNSDYVFRYGGEEFMIVLIETPKVAAHTIIERLRKKIQDHPIHLQNGESITMTISAGIA 435 Query: 424 MFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +++GHPDYE LI+ AD+ALY AK GRNR+E Sbjct: 436 VYSGHPDYECLIKAADDALYQAKANGRNRIE 466 >UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SPL2_STRM5 Length = 471 Score = 318 bits (815), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 168/420 (40%), Positives = 252/420 (60%), Gaps = 7/420 (1%) Query: 42 FYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARI 101 FY ++ D A FLS++QV+++L+ AM+RW+ +L+ + + Q + +VHAR+ Sbjct: 47 FYEVLLQDTRARRFLSHDQVKQRLQPAMQRWLAQLLTTDASGIANTVASQRIIGDVHARV 106 Query: 102 GIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSI-DIAMEVMTRAFTFSDS 160 GIPV++V G RVLK L+ V D ++ +++I DIAME MT A+T + Sbjct: 107 GIPVDLVTRGARVLKHELF-VRLRDDAPDSDTAFAAIDCLSAIMDIAMEGMTLAYTHARE 165 Query: 161 SASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLW 220 +++ D YR+FSL++N E+ERQ A +L WE ++Y + + L+ ++FGLW Sbjct: 166 RSTRADAAYRLFSLVQNVGTERERQRALLLDWENALLYALAGHVQASDNASLATSEFGLW 225 Query: 221 FNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQII 280 F HKG F +E + +L+ DG + + + + R+ L IR ++ I Sbjct: 226 FTHKGIPSFGESSETQQVGQLMARIDGHLQRA-----SGDAPAQRLAVLPAIREDLAAIR 280 Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 TL+ LFE + + G D LT LLNRRFLPT+ +REI A R TP S+L++D+D FK I Sbjct: 281 TLMTLLFERIGELDAGSDALTNLLNRRFLPTVLRREIELATRNRTPFSLLLLDLDHFKAI 340 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 ND GH+ GD L+ V+ R SDY+FRYGG+EF++VL ASE++ AE +R + Sbjct: 341 NDGHGHDAGDRALQHVAGVLGQLTRGSDYLFRYGGEEFVVVLVAASESQAAVIAESLRRQ 400 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 + K+ + ANG+ ++L+ SIG A +GHPDYERL+ AD A+Y AKR GRNRV + A L Sbjct: 401 IAKSPVPLANGQVLSLTASIGVAGHDGHPDYERLMARADAAMYEAKRSGRNRVVVASADL 460 >UniRef50_A4VFG3 GGDEF domain protein n=5 Tax=Proteobacteria RepID=A4VFG3_PSEU5 Length = 456 Score = 315 bits (806), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 163/420 (38%), Positives = 253/420 (60%), Gaps = 5/420 (1%) Query: 38 LSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQV-DDVERLIQIQHTVAE 96 L+ FY + DPH+ FLS++QV+ +L +M++WI+ V S+ D+ +I +Q V + Sbjct: 39 LAEHFYSQMLADPHSASFLSHDQVKNRLGKSMQKWIVTVCSSTAHSDLNAVIDLQRKVGD 98 Query: 97 VHARIGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFT 156 +HARI IPV +V G R LK L ++ + + + + + ID+A+E++ A++ Sbjct: 99 IHARIEIPVSLVLRGSRSLKGRLRQLLEQRELAEPIRRKAARMGADLIDLAVEIICFAYS 158 Query: 157 FSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQAD 216 S S+ +E YR+FS+ +N EKERQ A++L WE +++ + + + G+ L+ ++ Sbjct: 159 QSHDRNSRAEEAYRLFSVSQNIGVEKERQRAALLDWENQLMFDLAIGNLTGTLPQLAGSE 218 Query: 217 FGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTV 276 FGLWF HK H F G E I I D + ++ L++ + R+ L QIR Sbjct: 219 FGLWFRHKASHAFQGSPESASILEYITQID----EELKAIATLDDAAGRLGKLHQIREQT 274 Query: 277 SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 I LL LFE+ + E G DVLT+LLNR+FLP + +E+ +A ++ VL IDVD Sbjct: 275 RSIKFLLDSLFEQANDLEAGRDVLTRLLNRKFLPVVMAKEVLYARQSNNTFGVLAIDVDH 334 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK INDT GH+ GD+IL++V N R DY FR GG+EF++VL + N+ L AE+ Sbjct: 335 FKRINDTHGHDAGDQILQQVGALLASNTRGGDYAFRLGGEEFLLVLVDIDTNKALAAAEK 394 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 +R R+ + + ++GE + +++SIG A+ +GHPDYERL+Q AD+ALY AK GRNR L+ Sbjct: 395 LRERIAREHFRLSSGEVLQVTVSIGMAVHDGHPDYERLLQQADQALYQAKHGGRNRCVLY 454 >UniRef50_B5Y2I5 Diguanylate cyclase n=6 Tax=Enterobacteriaceae RepID=B5Y2I5_KLEP3 Length = 464 Score = 308 bits (788), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 168/463 (36%), Positives = 260/463 (56%), Gaps = 10/463 (2%) Query: 2 EMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQV 61 + Y + EW L + P +RA ++A + L+ FY + DP LS E V Sbjct: 6 QKYIAVIFKEWLPLYDSLTPDVRALLKKMADERSSMLATRFYDFIFQDPDIARHLSYELV 65 Query: 62 ERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYP 121 E +L ++ W+ +L+ + +D++ L + Q+ + +H+RIGIP E V G R +K L Sbjct: 66 EERLSRSLAGWVQQILTCEKEDLQALAERQYQIGSIHSRIGIPAEAVLRGARQIKSGLVE 125 Query: 122 VIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEE 181 I S + + H++I ++++A+E+M A+T S A+K +E +R++SL++N E Sbjct: 126 AIRDSQVARDTGIAAIHYAIMAMNMAVEMMCHAYTLSHYRATKNEEAFRLYSLMDNVPME 185 Query: 182 KERQIASILSWEIDIIYKILLD--SDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHIS 239 +Q AS+ WE I+ I+ + +DL ++L LS+++FGLWF HK YF+ ++G I+ Sbjct: 186 YGKQQASLSGWENSAIFNIVSENRTDLNATL-LSESEFGLWFRHKCVRYFNHNPQMGEIT 244 Query: 240 RLIQDFDGIFNQ---TMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVG 296 LI D + + ++ N +SL K + ++ SQ L LF +S+ + G Sbjct: 245 ELIGQVDALITEWRTAEQDAGYKNTQSLLQKIHIHCQHISSQ----LGVLFSSLSQMQNG 300 Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 D LT LLNRR+LP + K E+ A PL+V IID+D FKEIND WGH GD ++ V Sbjct: 301 KDALTSLLNRRYLPVVLKHEVTLAIEYDLPLTVAIIDIDFFKEINDKWGHMVGDRAIKHV 360 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 + DN+RSSDY+FRYGG+EF++VL E E ER+R ++ + I + Sbjct: 361 ADLLSDNIRSSDYLFRYGGEEFLLVLVETRAAEAFPLLERLRKKIGQLAFNVGGDTQIPI 420 Query: 417 SLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + SIG A GHPDY L++ AD ALY AKR GRN V++ K Sbjct: 421 TASIGFAAHTGHPDYNLLLRDADNALYAAKREGRNCVKMHKGG 463 >UniRef50_B7LMM6 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B7LMM6_ESCF3 Length = 472 Score = 304 bits (779), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 165/453 (36%), Positives = 268/453 (59%), Gaps = 6/453 (1%) Query: 11 EWTGLVEQADPPIRAKAAEIAVA--HAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSA 68 EW L+ Q P+ A ++++ H+L FY + + FL+ EQV +L S+ Sbjct: 20 EWQTLINQT--PVAAHELLLSLSDKELHHLVTIFYDYMLSHTESALFLNTEQVNSRLSSS 77 Query: 69 MERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDY 128 M W+ VL + D+ L+ QH + VHARIG+P+++V R +K+ LY ++ Sbjct: 78 MFHWLRAVLGSSQQDLHELLAKQHEIGIVHARIGLPIDLVARAARKIKEELYQILALRKV 137 Query: 129 SAAEKL-QVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIA 187 +AA + FS +ID A+E MT +++ S ++ +E YR+ ++ ++ E+ERQI Sbjct: 138 AAAHIITDAICFSGLAIDTAIEAMTASYSPSVQNSVNAEEQYRLLTIYDDINVERERQIR 197 Query: 188 SILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDG 247 S+ WE IY I + + LS+++FG+WF HKG+H + + L++ D Sbjct: 198 SLTDWENQFIYNIATGLPIKDLVFLSKSEFGMWFAHKGKHILGKSVLLSGMETLMKKIDH 257 Query: 248 IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRR 307 Q + L R+K L +IR +QI LL +FE++ + E G D LT+LLNRR Sbjct: 258 HLKQELPLHAQLTTDE-RLKLLQEIRQLTAQIHILLSSMFEDLVKEENGKDSLTQLLNRR 316 Query: 308 FLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS 367 F+PTI +REI+ A + P ++ ++D+D FK+IND +GHN GD L+ VS Y+++RSS Sbjct: 317 FIPTIMRREISIALHSRKPFALAMLDIDYFKQINDRYGHNAGDNTLKNVSAMIYEHIRSS 376 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG 427 DYVFRYGG+EF+I+L E ++ E +R+++ +++A+ E ++++SIG A ++ Sbjct: 377 DYVFRYGGEEFMILLVETELSQAKIILENLRNKMAGLRIQASASESFSVTVSIGVAEYDY 436 Query: 428 HPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 HPDY+ LI+ AD ALY AK +GRNRVE+++ + Sbjct: 437 HPDYKLLIEKADSALYYAKSQGRNRVEVFQPHM 469 >UniRef50_C1DFY2 GGDEF domain protein n=4 Tax=Gammaproteobacteria RepID=C1DFY2_AZOVD Length = 464 Score = 300 bits (769), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 162/450 (36%), Positives = 261/450 (58%), Gaps = 4/450 (0%) Query: 11 EWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAME 70 EW L+ Q P+ A+ E+A H L FY + D A FL++EQV+ +L + Sbjct: 12 EWKLLLGQFPAPVVAQIRELATTHQSELPGYFYEQMLQDEQAMLFLTHEQVKSRLHGTLR 71 Query: 71 RWIINVLSAQVDD--VERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDY 128 +WI++V S DD ++ LI Q + E+HARI IP+ +V G R L++ L+ ++ Sbjct: 72 QWIVSVFSMSDDDAALQALIAQQKQIGEIHARIKIPIHLVLRGARHLRERLFVLLRQRPL 131 Query: 129 SAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIAS 188 KL ++D+AME+M+RAF+ + S+ +E YR+FS+ +N E+ERQ ++ Sbjct: 132 DPEHKLFGQRLISETVDLAMEIMSRAFSDAYDRNSRSEEGYRLFSVAQNIGIEQERQRSA 191 Query: 189 ILSWEIDIIYKILLDSDLGSSLP-LSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDG 247 +L WE +++ + + L + LP LS ++FGLWF HKG H F G E I ++ D Sbjct: 192 LLDWENHLMFDLAV-GQLATQLPRLSNSEFGLWFRHKGAHAFQGSRETELILEGMRQIDE 250 Query: 248 IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRR 307 + + R++ L +R II L LFE+ + E G DVLT +LNR+ Sbjct: 251 VLLPLFGQPAAGADADQRLQNLRLLREQTKGIIFHLDNLFEQANVLESGRDVLTHMLNRK 310 Query: 308 FLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS 367 FLP I +E+A+A + +VL +D+D+FK IND +GH GD +L++++ ++ R Sbjct: 311 FLPVILAKEVAYARQNERSFAVLAVDIDRFKHINDEFGHEAGDVVLQQLASLLSNHCRGG 370 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG 427 DYVFR GG+EF+++L + ++ L AE++R + + + + +D+ L++SIG A+ +G Sbjct: 371 DYVFRMGGEEFLVLLVDVTQAHALGVAEKLRQQAAQERFRLPGEQDLQLTVSIGVALHDG 430 Query: 428 HPDYERLIQIADEALYIAKRRGRNRVELWK 457 HPDY+ L++ AD ALY AK GRN+V L + Sbjct: 431 HPDYQHLLRQADRALYEAKHGGRNQVVLAR 460 >UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X556_OCHA4 Length = 473 Score = 296 bits (757), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 158/415 (38%), Positives = 244/415 (58%), Gaps = 6/415 (1%) Query: 42 FYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARI 101 FY + + A FLS + V+ +L +++ W++ + DDVE I+ Q V EVHARI Sbjct: 55 FYNRLMNNRDAATFLSQKMVQERLHNSLSDWLLKMFQRTADDVEAFIREQRKVGEVHARI 114 Query: 102 GIPVEIVEMGFRVLK-KILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDS 160 +P+ +V G R+LK +I+ + + + H S N+IDIA+E+M++AF Sbjct: 115 DVPIHVVMQGARLLKNEIVRQLKLETASREVLARLIVHVS-NAIDIAIEIMSQAFVKDAR 173 Query: 161 SASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSL-PLSQADFGL 219 +++ DE YR F+L + E+E Q A+++ W +++ + +SD S L L+ +DFGL Sbjct: 174 ESAQTDEAYRAFTLSHDFPLERESQRAALMEWSQSLLFNLYGNSD--SPLHSLASSDFGL 231 Query: 220 WFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 W HK FS + +I R ++ D + + + R N L L + + ++ Sbjct: 232 WLQHKADLMFSNSGTLENIRRNVEHIDNVLLPAINSARKDNPAGLAASLAL-FQTKIGEV 290 Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 LL ELF+ + E G D LT+ LNRRF+P+I RE+ A++ LSVL+ID+D FK Sbjct: 291 KFLLSELFQAAAAMETGRDPLTRALNRRFMPSILTREVRMASQKAMDLSVLMIDIDHFKN 350 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 INDT+GH++GD +L++V++A R SD+VFRYGG+EF++ L EA EN+ AE +R Sbjct: 351 INDTYGHSSGDAVLQQVAEAILSLCRPSDFVFRYGGEEFLVALVEADENKAFTIAEELRK 410 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 ++ + L +G +++LSIG A FNGHPDY L+ AD ALY AK+ GRNR E Sbjct: 411 QIAQQPLNLPDGARQSVTLSIGVAAFNGHPDYSHLVNAADRALYRAKQAGRNRCE 465 >UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KC37_AZOSB Length = 475 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 164/454 (36%), Positives = 251/454 (55%), Gaps = 10/454 (2%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKS 67 ++ +W L + P +R ++ + H ++ FY + D A FLS+E V ++L+ Sbjct: 22 IESDWLKLFDAVSPSLREAVRDVVLEHRAAMADAFYARMMADGDARPFLSHEAVHQRLRF 81 Query: 68 AMERWIINVLSAQVDDVERLIQ-IQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSS 126 +M+RW+ + S +Q V EVH+R+ +PV +V G RVLK + + +S Sbjct: 82 SMQRWMETLFSCADHAAFAAAMALQRHVGEVHSRVDLPVNLVARGARVLKGEIAARLPAS 141 Query: 127 DYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQI 186 A +Q + N ID+A EVM+ A+ S A++ DE YR+FS +N E+ERQ Sbjct: 142 GLDRAALVQAVLYVDNLIDLAFEVMSSAYVASHERATRIDEAYRVFSYGQNMSLERERQR 201 Query: 187 ASILSWEIDIIYKILLDSDLGSSLPL-SQADFGLWFNHKGRHYFSGIAEVGHIS----RL 241 AS+L WE + + ++ G LPL S + FGLW HK F G AE+ I RL Sbjct: 202 ASLLDWE-NRFLQAMMAGQSGDELPLISDSAFGLWLQHKAVAVFEGSAELPSIREGMRRL 260 Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 +D + Q M + L+ R + + +++ + Q+ L+ +FE E G D LT Sbjct: 261 DRDLIPLCRQQMES---LDERGESRRLIKAVQSELGQLKFLIGAMFERFVDLESGKDALT 317 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 +LLNRRFLP I RE A ++L++DVD FK+IND GH+ GD +L++++ Sbjct: 318 QLLNRRFLPAILTRETEIARNQHKSFALLLVDVDHFKQINDVHGHDAGDRVLQQIASLLL 377 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 + VRS D+VFRYGG+EF+++L E R AE+IR RV++ + + ++ S+G Sbjct: 378 NTVRSGDFVFRYGGEEFLVLLVEVDRQHAARVAEKIRQRVQQETFLLPDSRQLQVTASVG 437 Query: 422 AAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 A+ +GHPDY+RLI AD+ALY AK GRNR E Sbjct: 438 VALHDGHPDYQRLINQADDALYRAKTGGRNRCEF 471 >UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3V9_9PROT Length = 456 Score = 281 bits (720), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 150/447 (33%), Positives = 254/447 (56%), Gaps = 7/447 (1%) Query: 11 EWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAME 70 +W L +Q + + +A L+ +FY + D A F+S++ V ++L ++M+ Sbjct: 13 DWQQLHQQVPESTKKLICDTVDRYAGDLATQFYDYMLADKEANPFISHDIVSQRLHASMQ 72 Query: 71 RWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDYSA 130 W+ + S Q D + + + Q V VHARI +P+ +V G R+LK+ + + ++ Sbjct: 73 GWLRELFSVQQHDPKEIYKYQCHVGVVHARIQMPISLVLRGSRLLKQAITEHLVETELDR 132 Query: 131 AEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASIL 190 A+ +Q F ++++M MT ++ + + + DE+YR+F+L +N E+ERQ A++ Sbjct: 133 AKLVQATRFVSEVMELSMSAMTDSYVINVGKSVRTDESYRMFALGQNMLAERERQRAALS 192 Query: 191 SWEIDIIYKILLDSDLGSSLP-LSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFD-GI 248 W I+ +L D G+ +P + ++FGLW HK F E+ I ++ + + Sbjct: 193 EWAQHILLHLL--GDEGTGVPEMKHSEFGLWLQHKASIIFHDAPELERIRVCVEKLERTL 250 Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRF 308 + RN N + + Q+ + ++ LL LF+ E G D LT+LLNRR+ Sbjct: 251 LPGLIEKRRNGGNAR---EAMRQVEADIGEVKFLLTGLFDRFIEVESGRDSLTRLLNRRY 307 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 LPTI RE+A A + P ++L++D+D FK INDT GH++GD +L++ S +VR D Sbjct: 308 LPTILMRELALARNSDVPFAILLLDIDHFKNINDTHGHDSGDMVLQQASDLVTSSVRVGD 367 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH 428 ++FRYGG+E ++VL E ++ L+ AE IR R ++ +G+ + +++SIG A +NGH Sbjct: 368 FIFRYGGEELLVVLVEIGRDQALQVAETIRERFAAEPMRVGDGKVMQVTVSIGVAAYNGH 427 Query: 429 PDYERLIQIADEALYIAKRRGRNRVEL 455 PDYER+++ AD+ALY AK GRNR EL Sbjct: 428 PDYERIVKDADDALYRAKNSGRNRCEL 454 >UniRef50_D0SV00 Predicted protein n=2 Tax=Acinetobacter RepID=D0SV00_ACILW Length = 465 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 145/455 (31%), Positives = 253/455 (55%), Gaps = 7/455 (1%) Query: 7 RMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLK 66 R+ ++W + + A H+ L EFY+ + I+ + EF S++ ++++L+ Sbjct: 8 RLAEQWEQICQNYSSDDLLHAFHFIQDHSLILVEEFYKNMLIEKESAEFFSDDLIQQRLR 67 Query: 67 SAMERWIINVLSAQVDD-VERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFS 125 + W++ ++ +Q Q V VHAR+GIP ++ G R +++ ++ ++ Sbjct: 68 DTLNAWLLESFGVGINKRYADAVQKQAMVGHVHARVGIPSWLIMRGVREIERKMFELLDE 127 Query: 126 SDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQ 185 + + + L + + + A EVM R++ + + +YR+FS +++ +K++Q Sbjct: 128 NPHHSM--LTTCSYIVQIMGFATEVMCRSYEAKTAMNQEIKHSYRVFSAMQDVAVQKDKQ 185 Query: 186 IASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDF 245 +S+L WE ++++K+ + + + LS+++FGLWF HK + F+G +V I I Sbjct: 186 RSSLLDWENELMFKVFSEHEKLNHPMLSKSEFGLWFIHKASYAFTGSDQVDLIIERIYQV 245 Query: 246 DGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLN 305 D + NQ + + + NN + + +IR+ +I L+ +LF+ E G D LT+LLN Sbjct: 246 DEL-NQDIMDCTDKNNM---LGLIQRIRDLNREIQLLVDQLFQVAEYIESGNDSLTQLLN 301 Query: 306 RRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVR 365 RR+L TI REI + + TPLS+L ID D FK IND +GH GD L+ +++A + Sbjct: 302 RRYLNTIISREITFSRKNHTPLSLLAIDADYFKSINDKFGHAAGDLALKFLAEALQKYSQ 361 Query: 366 SSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF 425 SDY FR GG+EF+++L + E L AE IR +E + +A G+ ++SIG ++ Sbjct: 362 GSDYAFRVGGEEFLLLLVDTDEKRALNIAESIRKYIENGMINSAQGQQFKFTVSIGCVLY 421 Query: 426 NGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 +GHPDY+R + AD ALY+AK GRNRV + SL Sbjct: 422 DGHPDYQRFLNAADSALYMAKNNGRNRVYMAHQSL 456 >UniRef50_C6RKE1 Diguanylate cyclase n=2 Tax=Acinetobacter radioresistens RepID=C6RKE1_ACIRA Length = 452 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 145/453 (32%), Positives = 251/453 (55%), Gaps = 7/453 (1%) Query: 2 EMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQV 61 E + ++W + Q A+ ++ L EFY+ + + A FLS+E V Sbjct: 3 EQCITMLAEQWKDICGQYSATDLNYTAQFIQDNSFLLVDEFYKNMMQEKEASYFLSDEIV 62 Query: 62 ERQLKSAMERWIINVLSAQV-DDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 + +LK+ + +W+++ + + E ++Q Q + VHARIGIP ++ G R ++K ++ Sbjct: 63 QSRLKTTLNQWLLDCFNMPFKQNYEEVVQRQLVIGNVHARIGIPSWLIMRGIREIEKKVF 122 Query: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 + + + V ++ + SI A E+M R++ + + YR+FS +++ Sbjct: 123 SL--QASRTQQNIYAVTNYIVQSIGFASEIMCRSYEANIEINNDIKHTYRLFSAMQDVSI 180 Query: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 +K++Q +S+L WE ++++K+ DS + L LS+++FGLWF HK + FSG +V I Sbjct: 181 QKDKQRSSLLDWENELMFKVFSDSASFNHLLLSKSEFGLWFIHKAAYAFSGTDQVQIIID 240 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 I + D + + + N + + +IR +I L+ +LF+ G D L Sbjct: 241 RIYEVDKLNLAVLESQDKAN----AIALIQRIREKNREIQHLVDQLFQVSEYIGSGNDSL 296 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 T+LLNRR+L TI REI + + G+PL++L ID D FK IND +GH GD L+ +++ Sbjct: 297 TQLLNRRYLNTIINREINFSRKNGSPLTLLAIDADHFKGINDKFGHAAGDLALQFLAEVL 356 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 + + SDY FR GG+EF+++L ++ + AE IR R+E+T +++ G ++S+ Sbjct: 357 LECTKGSDYAFRIGGEEFLLLLVDSDLSRAQSVAENIRMRIEETVIRSTMGVSFNFTVSV 416 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 GA +++GHPDY+R + AD ALY AK GRN V Sbjct: 417 GAVLYDGHPDYQRFLDAADSALYAAKNNGRNNV 449 >UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCI9_GLUDA Length = 472 Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 133/428 (31%), Positives = 227/428 (53%), Gaps = 14/428 (3%) Query: 38 LSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEV 97 L FY P + +L++ + +L+ + W+ + SA +R+ Q + Sbjct: 39 LVAAFYDHFTSHPEGQTYLTDPETTERLRGTLMVWMAELFSAAPQHPQRMADSQRHIGRF 98 Query: 98 HARIGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTF 157 HAR IP+ +V G ++++ + + + + E + N + A VMT + Sbjct: 99 HARSSIPIHLVSEGVSLVQRTIIHALGHENLTHEELTDAVLYVTNVLTAATGVMTFTYWR 158 Query: 158 SDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDII---YKILLDSDLGSSLPLSQ 214 A+ D YR+F+L ++ E E Q A++L W +++ Y DL ++ L++ Sbjct: 159 QRERAASNDVAYRLFALNQDLSREGEGQKAALLGWSYNVLRSLYVAKTPEDL-QTMGLAR 217 Query: 215 ADFGLWFNHKGRHYFSGI----AEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLL 270 ++FGLW +K F G G I+++ + + M R+++ L Sbjct: 218 SEFGLWVTYKVGLLFEGTDISALLTGQIAKVDNELLPAILEDMAAERDIS------PALA 271 Query: 271 QIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 + V++I++ L LF D LT++LNRRFLP+I E+ A++TG P+SVL Sbjct: 272 ALHAGVTEILSSLEVLFHASRSSNDVEDPLTRVLNRRFLPSIISYELRVAHQTGRPMSVL 331 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENET 390 +D+D FK INDT+GH GD +L+ +++ + R SD +FRYGG+EF++++ + + Sbjct: 332 FLDIDHFKHINDTFGHAAGDSVLQAIARVLEEASRLSDVIFRYGGEEFLVLMGDTDTEQM 391 Query: 391 LRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGR 450 L AER+R ++E T ++ +G +++SIGAA + GHPDYE L++ AD ALY AKR GR Sbjct: 392 LIGAERLRQKIENTPIRLPDGNLHQITVSIGAAQYAGHPDYEELLRAADAALYRAKRNGR 451 Query: 451 NRVELWKA 458 NR+E+ A Sbjct: 452 NRIEVADA 459 >UniRef50_B8KHV5 Ggdef domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHV5_9GAMM Length = 449 Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 133/419 (31%), Positives = 216/419 (51%), Gaps = 15/419 (3%) Query: 42 FYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVL-SAQVDDVERLIQIQHTVAEVHAR 100 FY+ + D A FL + +VE ++ E W VL S+ + L I + E HAR Sbjct: 36 FYQEMLSDSEAAAFLDHNKVESRMFGMFEAWAAEVLQSSAAIQPKELKAIHLKIGETHAR 95 Query: 101 IGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYH---FSINSIDIAMEVMTRAF-- 155 +GIP E V G +V+K + S+ + +K Q+ + ++ D + +M +A+ Sbjct: 96 VGIPAEQVIHGTQVVKAFCVKALISA-WDGQDKHQLDDGVLYVMSLFDTCLSIMNKAYLQ 154 Query: 156 -TFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQ 214 T D ++ +R+ S+ + E ER ++SW D+ Y S+ G + Sbjct: 155 RTLEDERNAQA-LRFRLASV--DLSVECERMKTELISWSRDMAYDDW-PSNSGKQSSIYA 210 Query: 215 ADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRN 274 + FG W +HK +F E+ I L+ + +G + + ++ ++RS +R Sbjct: 211 SMFGAWLSHKAPLHFGDFPELDRIRGLVAELNGCVERQLSDSFKASDRS---GLFADVRR 267 Query: 275 TVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 Q+ L+ EL ++ R D LT L RRFL I KRE A+ G S+L+IDV Sbjct: 268 LTDQVCFLIDELAQKSQREMDSRDPLTSLYGRRFLDGILKRENQIAHSAGDAYSLLMIDV 327 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FK++NDT+GH GD +L++V++ VR +D+ FRYGGDE ++VLT + + R A Sbjct: 328 DDFKQVNDTYGHAIGDRVLKQVAKVLTHVVRQTDFAFRYGGDELLVVLTSSDIDAARRKA 387 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 + I + + +G I + +SIG A + GHPDYE +++ ADEA+Y AK G+N+V Sbjct: 388 DAILQSIRAAPVNLDDGRVIPIKVSIGVAEYRGHPDYETMLKRADEAVYAAKTAGKNQV 446 >UniRef50_B6JHB4 Putative ggdef family protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JHB4_OLICO Length = 463 Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 127/413 (30%), Positives = 212/413 (51%), Gaps = 9/413 (2%) Query: 41 EFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHAR 100 +FY +V P A FL ++ V +L AM+ W+ ++ + + I+ Q V VHAR Sbjct: 52 QFYDVVINQPGAHFFLDHQLVNERLHRAMKEWLDDLFKRDGIEAKSFIRRQQQVGWVHAR 111 Query: 101 IGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDS 160 I +P +V GFR LK+ + + + S + +F +D+ +VMT A+ Sbjct: 112 IKVPERLVSRGFRELKRNIIISLRGTRLSREDLSAAIYFVSALLDLGFDVMTCAYIDRSE 171 Query: 161 SASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLW 220 + + DE +R+FSL +N E+ERQ AS+ W + + + + + +P+SQ+DFGLW Sbjct: 172 RSVRSDEAFRLFSLGQNLVTERERQRASLSEWAQSFFFTLQVGTSPLTFVPISQSDFGLW 231 Query: 221 FNHKGRHYFSGIAEVGHISRLIQDFDGIFN-QTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 H+ F +E RLI D I N + + + R+ +L +I+ + +I Sbjct: 232 VFHRAILLFDRSSEY---ERLI---DAIKNVEQISELVTFSPPQQRIDYLRKIKAAIGEI 285 Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 +LL LF+ + D LT+LLNR+F+ T+ EI + P SVL+I++D+F + Sbjct: 286 NSLLALLFDNSLEAQGARDTLTQLLNRKFVNTVISAEITAQKVSTHPFSVLMIEIDRFDQ 345 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 + G GD I+++ +Q +D+ R+SD VF G + F++V EA+ + A+ I Sbjct: 346 LRSRLGETGGDIIVQRTAQLIFDSTRTSDSVFSMGRETFLVVYVEANLLAAKQLAKFITD 405 Query: 400 RVEKTKLKAANGEDIA-LSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRN 451 R T + NGE + SLS+G ++GHPD L+ A L K+ R+ Sbjct: 406 RYATTHF-SVNGETVLDCSLSVGVVEYDGHPDPRELVNRAQRVLLEEKKIKRD 457 >UniRef50_A0L865 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L865_MAGSM Length = 453 Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 116/402 (28%), Positives = 211/402 (52%), Gaps = 7/402 (1%) Query: 55 FLSNEQVERQLKSAMERWIINVLSAQVDD-VERLIQIQHTVAEVHARIGIPVEIVEMGFR 113 FL + V+ +L ++ W+ + S + DD +E++ Q + VHARI IP+ +V G R Sbjct: 52 FLDSALVKERLHGSLTEWLQMLFSHKDDDTLEQMFAFQKNIGNVHARINIPMHLVVEGMR 111 Query: 114 VLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFS 173 +L++ + + SD + + +D + ++ ++ +S + ++ R+ Sbjct: 112 ILRREIICFLSESDIPRQRLVDLVVLVGEVLDHNLSLINESYVRMSASYERNNQALRL-Q 170 Query: 174 LLENAEE-EKERQIASILSWEIDIIYKILLDSDLGSSLP-LSQADFGLWFNHKGRHYFSG 231 L +A+ E ER ++ W + ++++L + + LP L +A+FGLW HK Sbjct: 171 LSPSAQALECERLRGTLRGWS-NQLWRVLGGRGIETELPSLGRAEFGLWMFHKAPLVLPQ 229 Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVS 291 ++ I + IQ D + + + +LN ++ L + + ++ I L + E + Sbjct: 230 YEQLHTIQQNIQAMDALLGRQRLSQEHLN--AVSRDTLSAVDDQLNSIELALDMMIEAIL 287 Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 E G D LTK+ NRRFL ++ K E+ + R L+ D+D FK INDT+GH+ GD Sbjct: 288 AQESGRDPLTKVYNRRFLDSVVKHEMEVSMRHEIRFGFLLCDIDHFKTINDTYGHDAGDA 347 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +L++ ++ R +DYVFR+GG+EF+ V + S AE++R +E+ +G Sbjct: 348 VLQQFAERLSSAARVNDYVFRFGGEEFLFVYGDMSPQRLEHLAEKVRHCIEQELFDLPSG 407 Query: 412 EDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 E I ++ S G A+ +G+P++ + +++ DEALY AK GRNR Sbjct: 408 EKIHITASFGGAVHDGNPNFHKTLKLTDEALYEAKHSGRNRC 449 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 77/179 (43%), Positives = 104/179 (58%), Gaps = 10/179 (5%) Query: 277 SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 + I L+REL R D LT NRR + I +EI + R G PLSVL IDVD Sbjct: 114 TYISDLIREL-----RFLADTDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDN 168 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FKE+NDT+GH +GDE+LRK+++ +R +DYV R+GG+EF+++L E LR AER Sbjct: 169 FKELNDTYGHKSGDEVLRKIAEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAER 228 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 IR RVE+ K +++S+G D L D A+Y+AK RG+NR EL Sbjct: 229 IRKRVEREDFKTGK-----VTVSVGVTELKEGDDLNTLFNRVDRAMYLAKERGKNRSEL 282 >UniRef50_O66623 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O66623_AQUAE Length = 338 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/161 (43%), Positives = 107/161 (66%), Gaps = 3/161 (1%) Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 + +D LT LLNRR LP I + + + T TP S+ ++D+D FK+INDT+GH GD++L+ Sbjct: 177 LKVDPLTGLLNRRVLPYILRDVLELSLYTETPFSIAMVDIDNFKKINDTYGHLFGDKVLK 236 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 +V++ N+R SDYVFRYGG+EF+I++ + +R E+IR VE T + G++I Sbjct: 237 EVAKIIKKNLRRSDYVFRYGGEEFLILMPSTELKDAVRILEKIRKEVENTPI-CWQGKEI 295 Query: 415 ALSLSIGAA--MFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +++S+G ++NG E I+ ADE LY+AKR G+NRV Sbjct: 296 RVTISVGVCSDVYNGLKSPEEYIKCADEKLYLAKRTGKNRV 336 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 127/228 (55%), Gaps = 19/228 (8%) Query: 238 ISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGM 297 +S + D DG+ + TRN++ R + + + + L EE+ R +V + Sbjct: 419 VSSYLLDADGVAQTILGITRNVSERK-------AVESALRETNRQLHARIEEIGRLQVAL 471 Query: 298 ------DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 D LT L NRR+L +RE++ A R G PLS++++D+D FK++NDT+GH GDE Sbjct: 472 QELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDHFKQVNDTYGHQVGDE 531 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +LR ++ ++R+ D RYGG+EF+I+L T+ A+ RS VE +K N Sbjct: 532 VLRILASTLSADIRAEDVACRYGGEEFLILLPNMPLETTMLRAQGWRSAVEALSVKHGNF 591 Query: 412 EDIALSLSIGAAMFNGH---PDYERLIQIADEALYIAKRRGRNRVELW 456 + I ++S+G A + H PD L + AD+ALY AK GRN+V ++ Sbjct: 592 Q-ITFTISLGVAAYPEHGKTPD--DLTRCADQALYRAKNEGRNQVSVF 636 >UniRef50_Q2RR54 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR54_RHORT Length = 582 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 7/190 (3%) Query: 271 QIRNTVSQIITLLRELF------EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 Q+R + I L++E + + + E +D LT +LNRR + + E+A + R G Sbjct: 382 QVREDAQRKIRLVKESYLAERDLKARAEREARVDYLTGVLNRRSFFELAEGELARSIRFG 441 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 PL+VL+ID+D FK +NDTWGH GDE+L+ V+ +R +D R GG+EF V+ E Sbjct: 442 RPLAVLMIDIDYFKAVNDTWGHGVGDEVLQNVAGLIGQTLRGADIFGRTGGEEFTAVIVE 501 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALY 443 AS +E L A+R+ + V + K+ GE I ++LSIG ++ G +E L + AD+A+Y Sbjct: 502 ASGSEALEVAQRLCAVVAQGKIVGPGGEAIGVTLSIGVSLLRGRDMAFEILSREADQAMY 561 Query: 444 IAKRRGRNRV 453 AKR GRNRV Sbjct: 562 GAKRAGRNRV 571 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 1/162 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT +LNRR + E+ A R PL++L ID D FKEINDTWGH GD +L +S Sbjct: 237 DSLTGVLNRRECSRVLIEELERARRYNRPLALLWIDFDHFKEINDTWGHAAGDSVLCSIS 296 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 D+VRS D + R+GG+EF+++L E E TAER+R RV + +G +I L+ Sbjct: 297 SLLEDSVRSVDTLGRFGGEEFVLILPEMDVAEAEETAERLRQRVCNQPVALESGHNIRLT 356 Query: 418 LSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVELWKA 458 +SIG A+F H D + L AD+A+Y AK++GRN + + +A Sbjct: 357 ISIGVAVFPDHGDTLDALCAAADKAMYRAKKQGRNCIAMAQA 398 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/190 (42%), Positives = 111/190 (58%), Gaps = 11/190 (5%) Query: 271 QIRNTVSQIITL------LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 Q+ VS+ I+L LRE E S D LT L NRR++ KREI A R Sbjct: 929 QLARAVSEHISLALVNLQLRESLESQSIK----DSLTGLYNRRYMEESLKREINLAQRKQ 984 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 P+ +++IDVD FK+ ND +GH GD IL +V NVRS D RYGG+EF+++L E Sbjct: 985 HPVGLIMIDVDHFKQFNDNFGHKAGDLILHEVGNFLMANVRSGDIACRYGGEEFLLILPE 1044 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIADEALY 443 AS +++ + AE+IR +++ + N +L++SIG A F H E LIQ AD ALY Sbjct: 1045 ASLSDSQQRAEQIRKGIKQLNFQQYNSAFTSLTVSIGVACFPAHGKQGETLIQSADMALY 1104 Query: 444 IAKRRGRNRV 453 AK +GR+RV Sbjct: 1105 QAKNQGRDRV 1114 >UniRef50_B5YAI5 Response regulator n=2 Tax=Dictyoglomus RepID=B5YAI5_DICT6 Length = 718 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 110/166 (66%), Gaps = 2/166 (1%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 +LFEE+++ + D LTKL NRR++ F++EI + R +PLSV+++D+D FK INDT+ Sbjct: 545 KLFEELNQLAI-TDPLTKLPNRRYIEAEFQKEIERSKRYSSPLSVMVLDLDNFKIINDTF 603 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH GD +L+K+++ R D V R+GGDEF+I+L E + ++++ A++I +EK Sbjct: 604 GHQYGDGVLKKIAENLRKYCRKVDIVGRFGGDEFVIILPETNLEKSIKVADKIIKNLEKM 663 Query: 405 KLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRG 449 + NGE + +S+SIG A + D E+L+ +AD A+Y AK+ G Sbjct: 664 NITLPNGEKVYISVSIGIASYPETTKDPEKLLSLADIAMYNAKKLG 709 >UniRef50_C5RGU1 Diguanylate cyclase with TPR repeats n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGU1_CLOCL Length = 1064 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 21/220 (9%) Query: 257 RNLNNRSLRVKFLLQIRNTVSQ------------IITLLRELFEEVSRHEVGM----DVL 300 RN N L + ++L + N + II L+ + E +H++ M D L Sbjct: 677 RNKQNEPLIIGYILLVSNKLINKFDSESLERALDIIPLVTFIIE---KHQLAMIASIDKL 733 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 TK R+ L + +++ H+ S++I DVDKFK+INDT+GH TGD +L + + Sbjct: 734 TKAYTRKALESYMIQQLEHSKNNDEEFSLIIFDVDKFKDINDTFGHQTGDLVLSSICKVI 793 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 ++R D RYGG+EFI++L S NE L AER+R +VE+ K+ + D+ +SL I Sbjct: 794 LSSIRKHDICGRYGGEEFIVLLPNTSTNEALEIAERLRIKVEEAKI-LGDRRDVTISLGI 852 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 + +G D +L++ AD+ALY+AK GRN+ LW+A+L Sbjct: 853 SSYPIHG-SDISKLVKRADQALYMAKETGRNKSFLWEAAL 891 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 97/159 (61%), Gaps = 1/159 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR+L F RE+A R PLS+L+IDVD FK+ NDT+GH GD +LR+++ Sbjct: 386 DPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYGHALGDTLLRRLA 445 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 R+ D V RYGG+EF+++L E + AE +R VE + + + E +AL+ Sbjct: 446 THLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLAVTSNDAEFVALT 505 Query: 418 LSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRVEL 455 +SIG A + H E L+ AD ALY AK RGRNRVE Sbjct: 506 ISIGGASWPDHATTPEDLLARADAALYRAKHRGRNRVEF 544 >UniRef50_C1ZLY6 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLY6_PLALI Length = 650 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 68/159 (42%), Positives = 102/159 (64%), Gaps = 5/159 (3%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NR+F + RE+ R PL+V+ IDVD FK +NDT+GH GD++L++V+ Sbjct: 345 DPLTGVHNRKFFDEVLLREVHRCVRAAQPLAVIFIDVDHFKNVNDTFGHQFGDQVLKRVA 404 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q F + VR +D + R+GG+EF++++++ SE R AERIR VEK + + + ++ Sbjct: 405 QIFSETVRVADTLARFGGEEFVVLVSQPSEKGVERLAERIRENVEKEAFRFGS-TPVKIT 463 Query: 418 LSIGAAMF---NGHPDY-ERLIQIADEALYIAKRRGRNR 452 +S+GAA+ G +RLI +ADE LY AKR GRNR Sbjct: 464 VSVGAAIAIPRRGETGIGDRLIAVADECLYEAKRNGRNR 502 >UniRef50_A3DDM3 Diguanylate cyclase n=3 Tax=Clostridium thermocellum RepID=A3DDM3_CLOTH Length = 1826 Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 4/164 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT R+F + ++ A+R + +S+++ID+DKFK IND +GH GDEIL KV Sbjct: 1488 DKLTGTYTRKFFENAIETQLKKASREKSQMSIIMIDIDKFKSINDNYGHQKGDEILSKVG 1547 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 N+R +D RYGG+EF+I+L + +E AER+RS VEK +L G+ +L+ Sbjct: 1548 NILLKNIRPTDICCRYGGEEFVIILPDTGPSEAEALAERLRSTVEKARLM---GQGNSLT 1604 Query: 418 LSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRVELWKASL 460 +S+G + + H LI+ AD+ALY AK GRNR LW + Sbjct: 1605 ISLGISCYPKHGSIRNELIEKADQALYHAKESGRNRYSLWNTKM 1648 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 72/163 (44%), Positives = 98/163 (60%), Gaps = 1/163 (0%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 RH +D LT + NRR T+ ++ I++A RT + L VL+ID+D FK+INDTWGH +GDE Sbjct: 270 RHLAEVDPLTNVFNRRAFLTLLEKAISNAQRTQSGLPVLVIDLDHFKKINDTWGHQSGDE 329 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +LR +R D + R GG+EF I L AS + AER+R+ V G Sbjct: 330 VLRHFVALANGCLRKEDVMGRLGGEEFAIFLPNASSEGSQAVAERLRALVAHHPAMTGRG 389 Query: 412 EDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 IAL++SIG + G + ++Q ADEA+Y AK RGRNRVE Sbjct: 390 P-IALTVSIGVTQYGGGETSDFVLQRADEAMYRAKERGRNRVE 431 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 8/176 (4%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 LF E RH +D LT + NRR +RE + RT PL++L+IDVD FK +NDT+G Sbjct: 501 LFAEARRHAT-IDELTGVWNRRTFFENVRREFQRSQRTLHPLAILMIDVDHFKSVNDTYG 559 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD++LR V++ + +R D + RYGG+EF + L E + + AER+R VE+ Sbjct: 560 HAAGDQVLRGVAERCRNQLRVIDIIGRYGGEEFAVALPETDIHAAGQIAERLRIAVERAP 619 Query: 406 LKAANGEDIALSLSIGAAMFNGHPD----YERLIQIADEALYIAKRRGRNRVELWK 457 G I+L++S+GAA++ HPD + +I AD ALYIAKR GRN V +W Sbjct: 620 FVTDYGS-ISLTISVGAAVY--HPDDHVTLDAVIDRADRALYIAKRSGRNSVRVWS 672 >UniRef50_C1XM61 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XM61_MEIRU Length = 609 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 2/177 (1%) Query: 277 SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 S+++ LR+ E+ R D LT+L NRR+L +RE A A R P+SV ++D+D Sbjct: 431 SRLLDKLRQQSAELERL-ARQDPLTRLNNRRYLEENLEREFAAAKRYKFPISVALVDIDH 489 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK+INDT+ H GD++LR V Q + R D+ RYGG+EF +V + L ER Sbjct: 490 FKQINDTFSHQVGDDVLRIVGQILEASCRGVDFAARYGGEEFALVFPQTDLPGALIACER 549 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 IR R+E+ A + D+ +++SIG + P++E+L+ ADE LY AKR GRNRV Sbjct: 550 IRQRIEQHNWAALH-PDLKVTVSIGVSSDPSLPNHEKLLAAADEQLYAAKRAGRNRV 605 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/161 (42%), Positives = 101/161 (62%), Gaps = 2/161 (1%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D LT L NR +L REIA A R G P+S+++ D+D FK++NDT+GH GD +L K Sbjct: 173 IDHLTGLYNRFYLEEAGAREIARAKRYGFPISLIMFDLDNFKQVNDTYGHQVGDRVLVKF 232 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 + NVRS+D RYGG+EF+++L E ++ AERIR EK + GE + L Sbjct: 233 ASIVSSNVRSTDMPVRYGGEEFVVLLPHTYPEEAVKVAERIREEFEKFLFR-FEGEVMRL 291 Query: 417 SLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVELW 456 ++S G + N G LIQ+AD+A+Y AK +G+NR+E++ Sbjct: 292 TVSAGISFCNSGECSLGELIQMADKAMYEAKEKGKNRIEVF 332 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/157 (43%), Positives = 103/157 (65%), Gaps = 1/157 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR++ KREI+ A R + +++IDVD FKE NDT+GH GD +L++VS Sbjct: 914 DSLTDLYNRRYMEESLKREISLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVS 973 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 NVRS D RYGG+EF+++L EAS ++ + AE+IR +++ K + +++ Sbjct: 974 NFLMINVRSGDIACRYGGEEFLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSFRSVT 1033 Query: 418 LSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRV 453 +S+G A F H + ++LIQ AD ALY AK++GR+RV Sbjct: 1034 VSVGVASFPDHGTNNDQLIQAADTALYQAKKQGRDRV 1070 >UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLJ7_9GAMM Length = 478 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 108/165 (65%), Gaps = 7/165 (4%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NR+ ++E + A R PL++L+ID+D+FK+IND +GH TGD +L++ S Sbjct: 303 DSLTGLYNRQHFKFRAEQEASRAVRYNQPLTMLMIDIDQFKQINDKFGHQTGDTVLQQAS 362 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q DN+R SD + RYGG+EFI++L ++ + + A+RIR ++K+ G +++S Sbjct: 363 QYIRDNLRESDLLGRYGGEEFIVLLPQSDLEQATQCADRIRDSLDKSIF--IYGSLVSIS 420 Query: 418 LSIGAAMFNGHPD---YERLIQIADEALYIAKRRGRNRVELWKAS 459 +S+G A PD Y+ L+ AD+ALY AKR GRNR+E++ A+ Sbjct: 421 VSVGLA--QQSPDTFVYDELVSQADQALYTAKRNGRNRIEIYAAT 463 >UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B074_SULD5 Length = 172 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 104/165 (63%), Gaps = 3/165 (1%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 + E D LT L NRR+ E+A + R PL+++++DVD FK+INDT+GH GDE Sbjct: 3 KQESITDGLTGLRNRRYFDQRISEEVALSRRYKLPLTLMLVDVDHFKKINDTYGHTVGDE 62 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK--AA 409 +L+K+SQ VR SD V RYGG+E +I+ ++ + AER+R +VE+TK+ A Sbjct: 63 VLKKLSQIILSVVRDSDIVARYGGEEIVIITPNTTKEDAGILAERLREKVEQTKVATIAT 122 Query: 410 NGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRV 453 E + +++SIG + D E L++ +D+ALY+AK+ GRNRV Sbjct: 123 TQEVVQVTISIGVCALSAVITDQEALLEESDQALYLAKKYGRNRV 167 >UniRef50_C1DVZ5 Ggdef domain protein n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DVZ5_SULAA Length = 826 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 114/188 (60%), Gaps = 3/188 (1%) Query: 265 RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 +V+F+ + N S + L + E+++ D LT L NRR++ F +EI A R Sbjct: 637 KVEFIESLINAFSPFASTLNLI--EINKELSLKDSLTNLYNRRYIIEFFTKEIGKAKRLD 694 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 + VL+IDVD FK++NDT+GH GD L+KVS F ++VR D V R+GG+EFI++L Sbjct: 695 YNIGVLVIDVDNFKKLNDTYGHLVGDLCLKKVSNVFLNSVREMDIVGRWGGEEFIVILPG 754 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALY 443 + E T + AERIR +V + + + + +++SIG A++ D + LI++ADE LY Sbjct: 755 SDEESTYQIAERIRKKVSSEVIFTPDNKILNITVSIGMAVYPKDGDNLDDLIKVADEKLY 814 Query: 444 IAKRRGRN 451 AK+ G+N Sbjct: 815 QAKKSGKN 822 >UniRef50_C0QHN1 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHN1_DESAH Length = 354 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 100/159 (62%), Gaps = 1/159 (0%) Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 +D LT NRR +R ++ A R PLS+ + D+D FK +NDT GH GDE+L+ Sbjct: 179 ASLDPLTGCYNRREFQNQIQRSVSDATRHKKPLSIFMFDIDHFKRVNDTHGHPAGDEVLK 238 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 ++S+ DN+R D + RYGG+EFI +L E ++++ + A+R+R +++ ++K +G +I Sbjct: 239 EISRLVADNIRRGDTLARYGGEEFIAILPETAKHKAIELADRLRLKIQSKEIKTDSG-NI 297 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 ++ S G A + H D RL++ ADE LY +K GRNRV Sbjct: 298 KVTASFGIAELHPHADSSRLVKDADEMLYKSKLSGRNRV 336 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 71/172 (41%), Positives = 99/172 (57%), Gaps = 8/172 (4%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L+E V R + D LT L N + E++ RTG PLS+L++D+D FK++NDT+G Sbjct: 221 LYETVRRLSI-YDPLTGLFNHGQFYNLLAEELSRHQRTGRPLSLLMLDIDHFKKVNDTYG 279 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD +L+++S R+ D V RYGG+E ++L E +TAER+R VEK Sbjct: 280 HRAGDAVLQQLSGLLKKQARAIDRVCRYGGEELALILPETDREAARQTAERLRRHVEKCC 339 Query: 406 LKAANGEDIALSLSIGAAMFNGHPD----YERLIQIADEALYIAKRRGRNRV 453 ++I +++SIGAA PD E L+ AD ALY AKR GRNRV Sbjct: 340 FATCGQQEIGVTVSIGAATC---PDAAISAETLVNAADRALYAAKRAGRNRV 388 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 67/157 (42%), Positives = 100/157 (63%), Gaps = 1/157 (0%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D LT + NRR+L T + E+ + R G PLS++++D+D FKEINDT GH GD LRK+ Sbjct: 141 VDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDIDHFKEINDTHGHICGDYTLRKI 200 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 S+ + VR+SD + RYGG+EF +L E S + L AER R++V ++ + + + Sbjct: 201 SELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLAERCRTQVAASQFSCTDHQS-RV 259 Query: 417 SLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 ++SIG + + +I+ AD+ALY AKR GRNRV Sbjct: 260 TVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNRV 296 >UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YHX9_9CYAN Length = 676 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 101/171 (59%), Gaps = 7/171 (4%) Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 E R++ D LT L NRR++ REI R P+ +L+ID+D FK+ NDT+GH Sbjct: 505 LRESLRYQSIRDPLTTLFNRRYMEESLTREINRVTRNTYPIGILMIDIDHFKQFNDTYGH 564 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 +TGD +L+ + VR SD RYGG+E I++L E + ET AE+IR V+K +L Sbjct: 565 DTGDSVLKAIGHFLQSQVRGSDIACRYGGEELILILPEVNLKETQNRAEQIREGVKKLQL 624 Query: 407 KAANGEDIALSLSIGAAMFNGHPDY----ERLIQIADEALYIAKRRGRNRV 453 K + + +++SIG A F PD E +IQ AD ALY AK +GR++V Sbjct: 625 KRGSQKLNEITVSIGVACF---PDQGLTGEIVIQAADAALYKAKEQGRDQV 672 >UniRef50_A1K902 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K902_AZOSB Length = 610 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 12/219 (5%) Query: 242 IQDFDGIFNQTMRNTRNLNNRSLR-----VKFLLQIRNTVSQIITLLRELFE--EVSRHE 294 I + + Q +R TRN + R + Q+ + I+ L REL E E+ RH Sbjct: 393 ISELSDVVEQMLRETRNTQESARRSGEELAELREQVESANQHILRLQRELDETSELVRH- 451 Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 D LT LNR+ L REIA A R G+PL + ++DVD FK++NDT+GH GD+ LR Sbjct: 452 ---DPLTGALNRKGLDEALAREIARARRHGSPLCLALLDVDNFKQLNDTYGHRAGDDALR 508 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 + + VR D V RYGG+EF+IVL + + R++ + + + AN + + Sbjct: 509 HLFSVIREAVRPQDAVGRYGGEEFLIVLPDTDTEQAAAVVVRLQRELTR-RFFLANSQKL 567 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 ++ S G A + D + I AD+A+Y AKR G+NRV Sbjct: 568 LITFSAGIARLHADEDPQLAIDRADKAMYAAKRAGKNRV 606 >UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DXV0_SULAA Length = 437 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 89/257 (34%), Positives = 135/257 (52%), Gaps = 14/257 (5%) Query: 203 DSDLGSSLPLSQ-ADFGLWFNHKGRHYF--SGIAEVGHISRLIQD-FDGIFNQTMRNTRN 258 D+D+ S+LP + +F W G+ Y EV H +L + F+ I + ++N Sbjct: 178 DTDVLSNLPDYKICEFTKWLEEHGQKYIDEKSYEEVWHFHKLFHEKFEKIKHIY---SKN 234 Query: 259 LNNRSLRVKFLLQ-IRNTVSQIITLLREL-FEEVSRHEVGMDVLTKLLNRRFLPTIFKRE 316 N SL V LL+ I N +++ +L + + VS+ + D LT NR L + +E Sbjct: 235 KENNSLAVYLLLKDIENASLKLLFILNRISLDNVSKIALK-DSLTGFFNRHMLDVLLSKE 293 Query: 317 IAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 + + R G +S+L++D+D FK IND +GH GDE+L S+ +N+R SDY FRYGG+ Sbjct: 294 TSRSKRHGYKISILMMDLDNFKNINDIYGHLVGDEVLMHFSRIVKNNLRESDYPFRYGGE 353 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQ 436 EF+I+L E L AERIR VE K ++ + + N + D I+ Sbjct: 354 EFLILLPHTDEEGALVVAERIRKSVESYKFPVIERITVSCGVREIKNLDNPYID----IE 409 Query: 437 IADEALYIAKRRGRNRV 453 AD LYIAK+ G+NR Sbjct: 410 EADRYLYIAKKTGKNRC 426 >UniRef50_A8TN49 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN49_9PROT Length = 305 Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 93/161 (57%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D LT R+ + KRE+ A R+GTP + I D+D+FK IND GH GD +L V Sbjct: 137 LDPLTGAQTRQVMLRDLKREVQRARRSGTPGCLAIADIDRFKSINDGHGHAVGDSVLAAV 196 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 S +++R D V+RYGG+EF++ L E E R +R+R R+ + G+++ + Sbjct: 197 SGLLIESLRPYDSVYRYGGEEFLLCLPETGPEEARRVLDRVRERIAGHPVMIDGGKNLVV 256 Query: 417 SLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 ++S G + E LI AD ALY+AK GRNRVE+W+ Sbjct: 257 TISFGLTLMTPRRPLEELIDRADRALYLAKESGRNRVEVWR 297 >UniRef50_C6C1P7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1P7_DESAD Length = 383 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 98/156 (62%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR + + ++EI + TG PLS++++DVD FK NDT+GH GD+IL + Sbjct: 223 DQLTGLFNRRHMLDVAEKEIFKSRNTGHPLSIMLMDVDDFKMFNDTYGHAAGDDILEAIG 282 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + +N+R++D FRYGG+EF+++L E + E ++ AE IR + + + G I + Sbjct: 283 KIIKNNIRATDKAFRYGGEEFMVILPETNGLEAIKVAENIRIALAEYEYHPKEGSPIHKT 342 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +SIG A F E++I+ AD+ +Y K +G+NRV Sbjct: 343 ISIGVAEFTNDESLEKVIKRADDNMYRCKIKGKNRV 378 >UniRef50_B8DPR2 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DPR2_DESVM Length = 552 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 70/166 (42%), Positives = 95/166 (57%), Gaps = 6/166 (3%) Query: 296 GMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRK 355 G D LT L NRR L R ++ R G P + L++D+D FK IND GH TGDE+LR+ Sbjct: 355 GTDELTGLANRRLLADAGARIVSICRRAGQPCACLMLDLDHFKHINDVHGHATGDEVLRR 414 Query: 356 VSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA 415 ++ A VRSSD+ R GG+EF I+ + AER+R VE+ L+ A+ + Sbjct: 415 LAAAIMATVRSSDFAVRMGGEEFAIIAPNTDATHAMALAERLRRNVERIDLRQAD-MPVP 473 Query: 416 LSLSIGAAMFNGHPDY-----ERLIQIADEALYIAKRRGRNRVELW 456 +++S+G A P Y E L+ AD ALY AK+ GRNRV LW Sbjct: 474 VAISVGVAGMTVTPRYGAGPLEDLLARADHALYRAKQAGRNRVVLW 519 >UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UV88_9AQUI Length = 475 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/160 (42%), Positives = 103/160 (64%), Gaps = 1/160 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRRF + I + R PLS+L++D+D FK IND +GH+ GD +L+K++ Sbjct: 310 DPLTGLNNRRFFMENARTIIDLSKRYREPLSLLMMDIDNFKSINDNYGHDVGDLVLKKLA 369 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + NVR+SD R+GG+EF+++L E L AERIR+ + +K +G+DI S Sbjct: 370 EVIRKNVRTSDIPARFGGEEFVVLLPRTDEKGALMVAERIRNEFRNSSVK-VDGKDIWTS 428 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 +SIG ++ + D + LI+ ADEALY AKR G++RV +++ Sbjct: 429 VSIGLSVLSEEDDIDSLIKKADEALYQAKRSGKDRVVIYR 468 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 113/202 (55%), Gaps = 13/202 (6%) Query: 260 NNRSLRVKFLLQIRNTVSQIITL------LRELFEEVSRHEVGMDVLTKLLNRRFLPTIF 313 NN + LQI TV++ + L LRE + ++ D LT L NRR+L + Sbjct: 1413 NNSTALPDAKLQIARTVAEQVALAIANLNLRETLQ----YQSIRDPLTGLYNRRYLEEVL 1468 Query: 314 KREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRY 373 +EIA R P+SV++IDVD FK NDT+GH+ GD +L+ + + VR SD RY Sbjct: 1469 TQEIARGQRRQHPISVVMIDVDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRY 1528 Query: 374 GGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA-LSLSIGAAMFNGHPDYE 432 GG+E ++L E+S ET AE IR + + L A NG+ + L++S+G A F H Sbjct: 1529 GGEEMTLILPESSLEETTIKAEEIREAIAQLTL-AYNGQHLGKLTISLGIAGFPKHGTTG 1587 Query: 433 -RLIQIADEALYIAKRRGRNRV 453 LIQ AD ALY AK GRN+V Sbjct: 1588 IALIQAADAALYRAKAAGRNQV 1609 >UniRef50_C1SP05 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP05_9BACT Length = 303 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 108/181 (59%), Gaps = 5/181 (2%) Query: 273 RNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLII 332 +NT ++I L +L EEV D LT + NR++ R I G P SV + Sbjct: 125 KNTHGELICELEKLKEEVY-----TDTLTSIGNRKYAEITLTRRINEWLDVGIPFSVFFL 179 Query: 333 DVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLR 392 D+D FK +NDT+GH+TGD++L+ V ++ +RS D R+GG+EF+I+ + T Sbjct: 180 DIDDFKTVNDTYGHDTGDKVLKMVGKSLTGTLRSMDVACRWGGEEFVIIAPNLTPASTRA 239 Query: 393 TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNR 452 AER+R +EK+ + A + ++I++++S+G + G+ E +I+ AD A+Y +K+ G+NR Sbjct: 240 VAERLRIFIEKSWIHAGDNKEISITVSVGCTVCKGNDTPESVIKRADSAMYKSKQSGKNR 299 Query: 453 V 453 V Sbjct: 300 V 300 >UniRef50_UPI0000E0E9F1 PleD-like protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E9F1 Length = 667 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 113/186 (60%), Gaps = 3/186 (1%) Query: 274 NTVSQIITL-LRELFEEVSRHEVGM-DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 +++S +I+L L L V+ H + M D LT L NRRF+ +REI A+R + L +++ Sbjct: 478 SSISDMISLSLANLQLRVALHNLSMRDALTGLYNRRFIEECIQREIDRASRNSSSLIIVM 537 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 D+D FK IND +GH+ GD +L+ +SQ F D V RYGG+EF+ +LT+ S+ Sbjct: 538 ADLDHFKHINDNYGHDAGDAVLKTISQLFVGFRNGYDIVSRYGGEEFLFLLTDISQENAF 597 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGR 450 + E++R ++E K++ +LS+SIGAA F + E LI ADEA+Y+AK GR Sbjct: 598 QRLEKLRLQIEDLKVETGGHVIDSLSISIGAATFPEMGTEKEILINRADEAMYLAKNNGR 657 Query: 451 NRVELW 456 N++ + Sbjct: 658 NQIAFY 663 >UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUP2_DESOH Length = 1644 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/179 (40%), Positives = 108/179 (60%), Gaps = 2/179 (1%) Query: 278 QIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKF 337 +II+L E+SR V D LT L N + + ++E+ A R G LS+++ID+D F Sbjct: 1465 EIISLSAAGRLELSRKAV-TDGLTGLYNHDYFQNMLQQELLLAKRKGRELSMIMIDIDHF 1523 Query: 338 KEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERI 397 K NDTWGH GD +LR+V+ ++ RSSD V RYGG+E ++L E AE+I Sbjct: 1524 KRFNDTWGHQAGDMVLREVAAEIRESCRSSDVVARYGGEEMALLLHETGPEAAFALAEKI 1583 Query: 398 RSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRNRVEL 455 R RVE +++ A GE + +++S+G A F H ++ L++ AD+ALY +K GRN V L Sbjct: 1584 RRRVEALRVEHAPGEYLQVTISLGVAGFPIHAKNKKPLVKKADDALYSSKAGGRNMVTL 1642 >UniRef50_Q2YBC6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YBC6_NITMU Length = 569 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/156 (45%), Positives = 96/156 (61%), Gaps = 2/156 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NR L I ++A RT P ++L++D+D FK +NDT+GH TGD+IL KV+ Sbjct: 410 DSLTGLYNRNKLDAILADQLARFRRTQRPFALLMLDIDHFKTLNDTYGHITGDKILAKVA 469 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q ++RS DY RYGGDEFII+L E ++ ++TAERIR+ VEK A I+++ Sbjct: 470 QILLQSIRSIDYAARYGGDEFIIILVETYIDQAVKTAERIRTHVEKLTYPAGK-STISIT 528 Query: 418 LSIGAAMFNGHPDYERLI-QIADEALYIAKRRGRNR 452 +SIGA + AD ALY AKR GRN+ Sbjct: 529 VSIGAVECRSDDSTTTAVFSRADNALYEAKRAGRNQ 564 >UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZ69_9AQUI Length = 419 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 119/193 (61%), Gaps = 3/193 (1%) Query: 262 RSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHAN 321 ++L ++++ +NT S++++ + + S E +D LT L NRR + I + + Sbjct: 227 KNLLIEYINLFKNT-SRLVSTIALVHSVSSEAEANIDPLTHLFNRRAMEIILTNQYTLSK 285 Query: 322 RTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIV 381 TG + + D+D FK+INDT+GH GD +L++V+ +R SD+VFRYGG+EF+I+ Sbjct: 286 ITGNDFVIGLADMDDFKKINDTYGHLVGDCVLKEVAVRIKSVLRKSDFVFRYGGEEFLIL 345 Query: 382 LTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIADE 440 L ++ E L+ E++R + +K N I +++SIGAA +P+Y E+LI++AD+ Sbjct: 346 LPYTTKREALKVLEKVRQSIIAEPIKCKNNM-IDITISIGAASLTENPEYLEKLIELADK 404 Query: 441 ALYIAKRRGRNRV 453 LY AKR G+N+V Sbjct: 405 RLYKAKRTGKNKV 417 >UniRef50_A6DBG2 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBG2_9PROT Length = 536 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/173 (38%), Positives = 114/173 (65%), Gaps = 9/173 (5%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E+ ++ +D LTKL NRRFL I + IA+A+RT ++ ++ID+D FK++NDT+GH+ Sbjct: 366 ELLHNQTIIDPLTKLYNRRFLENILNKIIANADRTNQKVAFVMIDMDYFKKVNDTYGHDV 425 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL-RTAERIRSRVEKTKLK 407 GD IL++++ ++R SD V R+GG+EF+I+L + E L +T E+IR ++E+ + + Sbjct: 426 GDMILKQLANILKSSIRESDIVVRFGGEEFLIILNNIKDKECLFKTLEKIRKKIEEYEFQ 485 Query: 408 AANGEDIALSLSIGAAMFNGHPDYE----RLIQIADEALYIAKRRGRNRVELW 456 G+ I ++S+GA+++ PD + I+ AD ALY AK GRN++ ++ Sbjct: 486 IPQGK-IKKTISMGASLY---PDTCNSPWQCIKNADIALYKAKNSGRNKIVIF 534 >UniRef50_C9YAH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAH7_9BURK Length = 359 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 96/159 (60%), Gaps = 5/159 (3%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR T+ E A + R+ +PL +L++D D FK ND +GH GD+ L VS Sbjct: 202 DPLTALKNRRAFDTLLANEFARSQRSKSPLCLLMVDADHFKAYNDAFGHVAGDQALMFVS 261 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 A R+ D+V RYGG+EF ++L + NE L AERIR + K+ G ++ Sbjct: 262 LAIKSQARAYDHVARYGGEEFCVILPDTKLNEALVVAERIRESI-----KSIIGLRRPMT 316 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 SIG A G P +RL+++AD A+Y+AK+ GR+RVE++ Sbjct: 317 GSIGVAYSEGVPSPKRLVELADRAMYLAKQGGRDRVEIF 355 >UniRef50_C9YCE2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCE2_9BURK Length = 382 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/177 (39%), Positives = 104/177 (58%), Gaps = 1/177 (0%) Query: 279 IITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 ++ + E +E +R D LT L NRRF+ ++A A R G P+SVL+IDVD FK Sbjct: 204 VVLMTNERADERNRLLAMQDELTGLSNRRFIMEALALQLAQARRNGKPVSVLMIDVDYFK 263 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 INDT+GH +GD +LR ++ + +R+ D R+GG+EF++VL + A +R Sbjct: 264 SINDTYGHLSGDRVLRNLATSLRSRLRAQDMAGRWGGEEFLVVLPDTDAAGATILAGNLR 323 Query: 399 SRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVE 454 + VE + A +G I L+LSIG + + + +I AD+ALY AK+ GRNRVE Sbjct: 324 AEVEDARWSAQDGRSIPLTLSIGVHTCDSATEELDTVISAADQALYRAKQAGRNRVE 380 >UniRef50_Q314F9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q314F9_DESDG Length = 542 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 94/169 (55%), Gaps = 6/169 (3%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 D LT L NRR L R I P S L++D+D FK++ND WGH+ GD +L+ V Sbjct: 368 CDTLTGLHNRRHLAHEGTRTITACTEADLPCSCLMLDIDFFKQVNDAWGHDAGDMVLQSV 427 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 ++ + VRS D R GG+EF ++ AERIR +E T ++AA+ E I + Sbjct: 428 ARTISNAVRSKDMTIRMGGEEFAVIAPATDTASAFSLAERIRRNIESTPVQAADDE-IRI 486 Query: 417 SLSIGAAMFNGHPDY-----ERLIQIADEALYIAKRRGRNRVELWKASL 460 ++SIG A G P + + L+ AD ALY AK++GRNR E+W L Sbjct: 487 TISIGVADMGGAPIFGTTQLDDLLAKADRALYQAKKKGRNRTEIWSEKL 535 >UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y4_AMMDK Length = 615 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 99/167 (59%) Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 E++R +D LT+L NRRFL ++ A R P S+L IDVD+FK +ND +GH Sbjct: 423 LSELNRRLSLIDPLTQLYNRRFLEEYLTHQVVEAQRLNRPFSILFIDVDQFKNVNDFYGH 482 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 GD L ++Q N+R +D V RYGG+EFI VL + AE++R V +T + Sbjct: 483 EVGDIALTLLAQTIKQNLREADAVVRYGGEEFIAVLPGTDLEGAAQAAEKVRRAVAETPI 542 Query: 407 KAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +GE+I L++SIG A + + E +IQ ADEA+Y AK +G+N V Sbjct: 543 CLESGENIFLTVSIGVAQYRIGLNPEEVIQRADEAMYQAKIKGKNLV 589 >UniRef50_Q3A583 Diguanylate cyclase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A583_PELCD Length = 517 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/161 (44%), Positives = 96/161 (59%), Gaps = 4/161 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L N+RF T +E+A A R G LS++ DVD FK INDT GH GD +LR VS Sbjct: 354 DELTGLYNQRFFLTEMDKELARAKRYGYSLSLVFFDVDFFKNINDTHGHLAGDAVLRHVS 413 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 VRS D V RYGGDEF I++ E + + ER+R VEK L NG+ IA++ Sbjct: 414 AKVTSCVRSCDTVVRYGGDEFAIIMPETDQGDLAIFTERLRFEVEKM-LVPMNGKTIAVT 472 Query: 418 LSIGAAMFNGHPDYER---LIQIADEALYIAKRRGRNRVEL 455 +SIG F+G + L+ +AD+A+Y +K+ GRN V + Sbjct: 473 ISIGGTSFDGRDESVTRYVLLNVADQAIYQSKKLGRNTVTI 513 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 2/156 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT+L NRR L + +EIA ++R PLSVL++D+D FK++NDT+GH GD +LR Sbjct: 228 DELTQLYNRRALEELLPKEIARSSRHKQPLSVLLLDIDHFKKVNDTYGHQAGDRVLRTTG 287 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + R D FRYGG+EF+++L + + AE++R +++ ++ N + + + Sbjct: 288 KLLILQTRKDDLSFRYGGEEFLVLLPNTDVEKAVIVAEKLREAIKRARMLPTNVD--SCT 345 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 S G FNG D++ I+ AD+ALY AK GRN+V Sbjct: 346 ASFGVTQFNGEDDWQTAIERADQALYSAKENGRNQV 381 >UniRef50_A6LJN4 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Thermosipho RepID=A6LJN4_THEM4 Length = 463 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/184 (39%), Positives = 109/184 (59%), Gaps = 9/184 (4%) Query: 272 IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 I+ ++ + LL E +S+ + D LTK+ NR F+ K + + R PLSV + Sbjct: 283 IKKPLALVFKLLNEY--NLSKSKTEFDELTKVYNRAFIMEKLKELLQLSLRQKIPLSVAM 340 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 ID+D FK++NDT+GH GDE+L+KV+Q DN+R SDYV RYGG+EF+++L S N+ Sbjct: 341 IDIDDFKKVNDTYGHLKGDEVLKKVAQIIRDNLRESDYVGRYGGEEFLVILPGISCNQAK 400 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERL--IQIADEALYIAKRRG 449 + ERI +V T K+ ++ S + P+ L I+ AD+ LYIAK+RG Sbjct: 401 KVLERILDKVRNTDWKSLGVNNVTFSAGLCC-----KPEKSMLGFIKRADKNLYIAKKRG 455 Query: 450 RNRV 453 +N+V Sbjct: 456 KNQV 459 >UniRef50_D0LH79 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH79_HALO1 Length = 261 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/177 (40%), Positives = 106/177 (59%), Gaps = 8/177 (4%) Query: 277 SQIITLLRELFEEVSR--HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 +++ LLR EE++R +V +D LT + NRR + + +RE NR GT L +L+IDV Sbjct: 84 ARVGALLRTQ-EEIARLREQVCVDELTAVFNRRGILAMLERETNRMNRNGTRLGILLIDV 142 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FK++NDT+GHNTGD++L + + N+RSSD R GGDEF++VL + E + + A Sbjct: 143 DDFKQVNDTYGHNTGDDVLSAIGRVLQQNIRSSDAAGRIGGDEFLVVLPDVDEYQAHQVA 202 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY--ERLIQIADEALYIAKRRG 449 RIRS +E+ + G + +S S+G A+ G LI AD ++Y KR G Sbjct: 203 ARIRSGIEQISIP---GVQLQVSASVGVAVSEGQAQRAGRGLIDDADRSMYRCKRGG 256 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/174 (41%), Positives = 98/174 (56%), Gaps = 5/174 (2%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 LRE EE S D LT L NRRFL RE+A A R PL VL++D+D FK IND Sbjct: 436 LREQLEEASIR----DALTGLYNRRFLDETLARELARAERQAVPLCVLMLDIDHFKPIND 491 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH GD L V++ +VR D V RYGG+EF+I++ A + R + +R V Sbjct: 492 DYGHALGDRALVAVAELLNAHVRRDDIVCRYGGEEFVIIMPGAGLDAAQRRGDHLRRCVS 551 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVEL 455 ++A I L++S+G A + H D E L+ AD ALY AK+ GRNR+ + Sbjct: 552 ALDVEANVPAPIRLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQGGRNRLTI 605 >UniRef50_A1AK83 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK83_PELPD Length = 304 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 97/170 (57%), Gaps = 1/170 (0%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L EE + D LT + NR F E A R GTPLS++I D+D FK +NDT+G Sbjct: 133 LAEEALQCAARTDHLTGIANRWEFINRFNTEKGRAERHGTPLSIIIADIDHFKSVNDTFG 192 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 HN GD +LR V+ A ++R D R+GG+EF+++L + + + R AE++R V + Sbjct: 193 HNAGDRVLRSVANAISSSIRVEDACGRWGGEEFMLLLPDTNLDAAARVAEKLRQAVSELS 252 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + GE IA++LS+G F + IQ D ALY AK GRNRVEL Sbjct: 253 IP-WEGESIAVTLSMGVGQFRPGMTLDECIQPVDHALYRAKTGGRNRVEL 301 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 5/181 (2%) Query: 273 RNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLII 332 R +++ LL + E +R D LT L NRR L + E A RTG PLS+ I Sbjct: 185 RRHTQRLLILLTQQLAESAR----TDELTGLANRRALCERLEYEQVRARRTGRPLSIAIC 240 Query: 333 DVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLR 392 D+D FK +ND +GH GD +L+ V+ +DN+R D + R+GG+EF+++L E E R Sbjct: 241 DIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDEAGAAR 300 Query: 393 TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNR 452 AE++RS VE + + +G ++++LS G D + I+ AD+ LY+AK +GRNR Sbjct: 301 LAEKLRSLVEAME-YSYHGIPVSVTLSFGVHTCGPEGDIDYHIRKADQKLYLAKEQGRNR 359 Query: 453 V 453 V Sbjct: 360 V 360 >UniRef50_Q1NSC4 GGDEF:GAF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NSC4_9DELT Length = 376 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 88/234 (37%), Positives = 128/234 (54%), Gaps = 13/234 (5%) Query: 226 RHYFS--GIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQ-IRNTVSQIITL 282 RH + G+ GHI +Q +G + LR + LL+ I + IT Sbjct: 152 RHTITPPGMEPHGHIIVPLQSKEGTVGVFYYHLPPDTPLPLRKQSLLKDIGALLGMAITN 211 Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R +EE S E G DVLT L NRR L T +R+ A A R + L+V+++D+D FK+ ND Sbjct: 212 ARR-YEEKS-AEAGQDVLTGLANRRQLNTELERDWATAQREKSSLAVIMLDLDHFKQYND 269 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 T GH GD +LR++ Q D VR D RYGG+EF+++L A + AER+R V Sbjct: 270 THGHLAGDRLLREMGQIMRDCVRCEDLPVRYGGEEFLVLLRRAGDARAEAVAERLREAV- 328 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 A ++ +SL + + N H D +++Q ADEALY AK++GRNRV+++ Sbjct: 329 ------AARTEVTVSLGVAGSNQNDH-DPWQMVQRADEALYQAKQQGRNRVQVY 375 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 125/217 (57%), Gaps = 9/217 (4%) Query: 244 DFDGIFNQTMRNTRNLNN--RSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 D I++Q NT + ++ + L I VS++ L + +E + + D LT Sbjct: 195 DVTDIYSQIRANTLIASGLTAAISLSLLSMIWILVSRLARRLTKAYETIEVMSI-TDELT 253 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 +L NRR T EI+ + R G+P+S++I+D+D FK +ND +GH GD +L + + Sbjct: 254 RLHNRRHFETRLAEEISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDWVLTQFATLLK 313 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 DNVR +D R+GG+EF+++LTE++ ++ AE++R VE + +G I +++S+G Sbjct: 314 DNVRKADVPARWGGEEFVVILTESTISQARMAAEKVRRNVESAEFNIPDGRSIPVTVSVG 373 Query: 422 AA---MFNGH---PDYERLIQIADEALYIAKRRGRNR 452 A M +G + + L++ AD+ALY AK+ GRNR Sbjct: 374 VASLDMISGDEMGSEADVLVKTADDALYRAKQEGRNR 410 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 103/170 (60%), Gaps = 8/170 (4%) Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 + V+ + D LT L NR + T+ + EI A R P+S+L+ D+D FK+INDT+GH+ Sbjct: 326 KNVAEKKAITDKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYGHD 385 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GD L+ +++ +R SDYV R+GG+EF+ +L E + + AE+IRS +E K Sbjct: 386 KGDYALKTIAEIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYNFK 445 Query: 408 AANGEDIA-LSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVEL 455 DI +++SIG M G P + I+ ADEALY AK +GRNRVE+ Sbjct: 446 -----DIGRVTVSIGVTMLKIGEP-LDNAIKRADEALYAAKNKGRNRVEV 489 >UniRef50_A1SY47 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY47_PSYIN Length = 794 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 69/157 (43%), Positives = 102/157 (64%), Gaps = 1/157 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NR +L I + + T TPLS+L+IDVD FK+INDT+GH TGD IL+ + Sbjct: 637 DNLTSIFNRHYLFEISPMLLTVSEETQTPLSLLLIDVDHFKKINDTYGHLTGDNILKFIV 696 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + +R+ D R+GG+EFII+L +A+ E++ AE++R VE+ NG DI+++ Sbjct: 697 KNIQAILRADDIFVRFGGEEFIILLPKANLEESVMVAEKLRLSVEQNNYH-KNGMDISIT 755 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +SIGA+ + E+LI AD ALY AK +GRN+V+ Sbjct: 756 VSIGASQYQHTETLEKLISRADLALYSAKEKGRNQVK 792 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 68/158 (43%), Positives = 99/158 (62%), Gaps = 3/158 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR+L F+RE+ A R+ P++V+++D+D FK ND+ GH GDE+LR + Sbjct: 469 DPLTGLYNRRYLEESFERELHRAQRSDDPIAVIMLDIDHFKHFNDSHGHEAGDELLRALG 528 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI-AL 416 Q +R+ D RYGG+EF +V + ++ R A+++R VE T+ A+ GE + + Sbjct: 529 QLLSGCIRAEDVACRYGGEEFAMVFPGMTLDQATRWADQLRHTVESTQF-ASRGEALEQV 587 Query: 417 SLSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRV 453 S+S+G A F H + LI+ AD ALY AKR GRNRV Sbjct: 588 SVSLGVAAFPQHGRHLADLIRAADAALYRAKREGRNRV 625 >UniRef50_D0KW85 Diguanylate cyclase/phosphodiesterase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KW85_HALNC Length = 875 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 1/159 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT++ N+R ++ E+ A R G + +ID+D FK +ND++GH GD L KVS Sbjct: 437 DPLTQMYNQRMFWSLLDYEMDRAQRHGYSFGLFVIDIDDFKVVNDSYGHTFGDTFLCKVS 496 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + +D +R+ D + RYGGDEF +L EA E E + A+R+ +R+ +K +G + +S Sbjct: 497 ECLHDALRTGDILARYGGDEFTAILPEAGEKECIMVADRLLARIRNLSMKTPDGHSVGVS 556 Query: 418 LSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRNRVEL 455 LSIG + H D R L IAD +Y AK G+N+ L Sbjct: 557 LSIGIGIGPTHTDSARGLFSIADAQMYRAKLAGKNQFAL 595 >UniRef50_A0Q289 GGDEF domain protein, putative n=2 Tax=Clostridium RepID=A0Q289_CLONN Length = 1804 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 9/197 (4%) Query: 267 KFLLQI-RNTVSQIITLLRELFEEVSRHE----VGMDVLTKLLNRRFLPTIFKREIAHAN 321 KFL I +NT+ +I+ L+ + + +++ +D LT R++L I AN Sbjct: 1435 KFLNSINQNTLEEIMKLINLIAYIIDKYQLTISCSIDKLTGAYTRKYLEDKLSESIECAN 1494 Query: 322 RTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIV 381 S+++ D+D FK +NDT+GH GD++L V N+R D RYGG+EFI + Sbjct: 1495 FNNDKFSIIMFDLDHFKNVNDTFGHQVGDKVLNNVCGIVMKNLRDGDICGRYGGEEFISI 1554 Query: 382 LTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYER-LIQIADE 440 L E++ L AERIRS VE +K+ GE +++SIG + + +R LI+ AD+ Sbjct: 1555 LPGIGESKALNIAERIRSAVEDSKIL---GEKHPVTISIGISTYPQQAQLKRELIEKADQ 1611 Query: 441 ALYIAKRRGRNRVELWK 457 ALYIAK GRNR ++WK Sbjct: 1612 ALYIAKDSGRNRCKVWK 1628 >UniRef50_A4J801 Diguanylate cyclase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J801_DESRM Length = 417 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 70/164 (42%), Positives = 98/164 (59%), Gaps = 1/164 (0%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 MD LTKL NR ++ + EI A R PLS L++D+D FK IND +GH TGD IL+K+ Sbjct: 247 MDELTKLFNREYMKIRLESEIRRARRNKLPLSFLMLDLDYFKSINDCFGHQTGDLILKKI 306 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGED-IA 415 S+ ++R D FRYGG+E I+L E E AER+R +E L + E+ I Sbjct: 307 SELICVSLREEDLAFRYGGEEIAILLPETGLYEAKIVAERLRQVIETNSLYVNHYEEPIH 366 Query: 416 LSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 +++SIG A E LI+ AD+ALY+AK++GRN + + S Sbjct: 367 VTISIGLAELAAKDTQETLIKKADDALYLAKKKGRNCYQCIEES 410 >UniRef50_C0QTH1 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QTH1_PERMH Length = 683 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 75/191 (39%), Positives = 109/191 (57%), Gaps = 7/191 (3%) Query: 270 LQIRNTVSQIITLL----RELFEEVSRHE--VGMDVLTKLLNRRFLPTIFKREIAHANRT 323 + I N++ I+TL+ R L + ++ E G D LT L NRR + K E++ A R Sbjct: 236 INILNSILSIMTLVTGSSRALSKAITELEYFAGHDPLTDLYNRRIFEDLLKYEVSRAKRK 295 Query: 324 GTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLT 383 S+++ID+D FK INDT+GH+ GD +L+ V+ ++R D V R GGDEF+I+L+ Sbjct: 296 NYKFSLILIDLDNFKYINDTYGHHIGDIVLKSVADILEASIRDGDLVARIGGDEFVILLS 355 Query: 384 EASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEAL 442 E + L AERIR +E KL G I++S S+G F H E L+ + D AL Sbjct: 356 ETELEKALIVAERIRKNLENNKLCIFEGAVISVSASLGVVEFPTHGTTKEELMMVVDNAL 415 Query: 443 YIAKRRGRNRV 453 Y AK G+N+V Sbjct: 416 YRAKDLGKNKV 426 >UniRef50_C4V482 Possible diguanylate cyclase n=2 Tax=Selenomonas RepID=C4V482_9FIRM Length = 620 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 70/157 (44%), Positives = 97/157 (61%), Gaps = 5/157 (3%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT LLNRR + + K +A + TPLSV+++D+D FK +ND +GH+ GD++L VS Sbjct: 456 DTLTNLLNRREMERLLKEAVALSQAQKTPLSVILMDIDHFKAVNDNYGHDMGDKVLLTVS 515 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 A +R SD R+GGDEF I+L A R ERIR RVE+ K+ + ++ Sbjct: 516 DAISRTIRGSDAGCRWGGDEFFIILQGAPLAVAGRVGERIRRRVEEAKMPFHHN----VT 571 Query: 418 LSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRNRV 453 +S+GAA F+ D E +L + ADEALY AK+ GRN V Sbjct: 572 ISVGAAAFDPEQDNELQLFKNADEALYQAKKAGRNVV 608 >UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GW9_DECAR Length = 469 Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 104/197 (52%), Gaps = 15/197 (7%) Query: 272 IRNTVSQIITLLREL---------------FEEVSRHEVGMDVLTKLLNRRFLPTIFKRE 316 +RN Q+I + L EE R D LT L N R L E Sbjct: 266 LRNGAGQVIGAIETLQDVTERRRAEEALRESEERYRSLSQTDSLTGLFNSRHLHEQLPNE 325 Query: 317 IAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 + A R G PLS+L++D D FK +ND +GH GD++L+ ++ A +R SD+ FRYGG+ Sbjct: 326 LERAGRYGRPLSLLVLDCDNFKCVNDRYGHLGGDKVLQSLATAIGHCLRRSDFAFRYGGE 385 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQ 436 EF+++L E + L AER+RS+ + A +G+ I ++SIG A L++ Sbjct: 386 EFVVLLPETAIQAALAIAERLRSQFASIETPAPSGDAICCTVSIGVAECVPGESEASLVR 445 Query: 437 IADEALYIAKRRGRNRV 453 ADEA Y+AK RG+N V Sbjct: 446 RADEACYMAKARGKNCV 462 >UniRef50_B6BJ77 Signal transduction response regulator-chey like receiver and ggdef domain n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJ77_9PROT Length = 534 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 4/159 (2%) Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 V +D LTK+ NR+ + TI +E+ A R LS++I D+D FK INDT+GHN GD++L+ Sbjct: 374 VNVDHLTKIHNRKSIETILIKELKRAKRYNHELSLIIFDIDNFKNINDTYGHNIGDKVLK 433 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 +++ +++R SDY R+GG+EFI++ TE S + L AE+IR + + A Sbjct: 434 SIAKVVANSIRESDYFGRWGGEEFIVISTETSMDNALLVAEKIRESISTYDFEEAE---- 489 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 ++ SIG A + ++ ++ AD ALY AK G+NRV Sbjct: 490 KITCSIGVAEYTSEDTHQSIVHNADTALYKAKHSGKNRV 528 >UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas RepID=Q2P4J7_XANOM Length = 569 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 72/160 (45%), Positives = 91/160 (56%), Gaps = 5/160 (3%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR+L E+A R G PLSVL++DVD FK+ ND+ GH GD +L V Sbjct: 402 DALTGLYNRRYLEESLSHELARCARRGLPLSVLMLDVDHFKQFNDSQGHAGGDLLLAAVG 461 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + +R+ D RYGG+EF ++L EA E LR AE+IR + + ++ Sbjct: 462 ELLLTRLRTEDVACRYGGEEFTVLLPEADGEEALRVAEQIRGYIAALAVSDEARALPKVT 521 Query: 418 LSIGAAMFNGHPDYER---LIQIADEALYIAKRRGRNRVE 454 SIG A F D E+ LIQ AD ALY AK RGRNRVE Sbjct: 522 ASIGVASFPA--DGEQGASLIQKADAALYRAKHRGRNRVE 559 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 114/195 (58%), Gaps = 11/195 (5%) Query: 272 IRNTVSQIIT---LLREL-----FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRT 323 +R+ Q++ ++R++ EE R +D LT+L NRR+ T+ ++E R Sbjct: 230 LRDAAGQVVGAMEIIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRY 289 Query: 324 GTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLT 383 P+++ +ID+D FK +ND +GH GD +L V+Q +DN+R D + RYGG+EF+I+L Sbjct: 290 HHPMALCMIDIDHFKSVNDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLP 349 Query: 384 EASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEA 441 E + ER+R V + +++ +G ++++LS+G P ERL+ AD+ Sbjct: 350 ETDLQTACASTERLRVAVAERRIETPSGP-VSVTLSLGVVAIADGPAMTLERLLDAADQM 408 Query: 442 LYIAKRRGRNRVELW 456 LY AK+ GRNRVE+W Sbjct: 409 LYRAKQAGRNRVEIW 423 >UniRef50_Q15YR5 Diguanylate cyclase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15YR5_PSEA6 Length = 378 Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 100/159 (62%), Gaps = 4/159 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LTKL NRR+ + E A + R PLS+L++DVD FK+IND GH GDE+L ++S Sbjct: 214 DPLTKLNNRRYFSNKLEVETARSLRYQHPLSLLVVDVDDFKKINDNDGHLVGDEVLIEIS 273 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q +R+ D V RYGGDEF+I+L EA ++ A+RI V++TK A+ + ++ Sbjct: 274 QLIAQQLRAGDVVCRYGGDEFVILLVEACAEQSREIADRICQSVDRTKFGRASHK---VT 330 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 +SIG A + G P +Q AD+ +Y +K+RG+N+V + Sbjct: 331 VSIGYAQYVGQP-LGDFMQQADKMMYTSKKRGKNQVAFF 368 >UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YC42_9BURK Length = 409 Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 71/172 (41%), Positives = 107/172 (62%), Gaps = 8/172 (4%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 REL E ++R D LT L NR + E+ A R G+ ++L++D+D FK INDT Sbjct: 243 REL-ERLTRQ----DGLTGLFNRNTFVELSTNELKRAKRQGSATTILLLDLDHFKRINDT 297 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 WGH GD +LR V+Q ++VRS+D V R GG+EFI++L + + + AE+IR R+E Sbjct: 298 WGHPAGDVVLRHVAQTMVNSVRSTDLVGRLGGEEFIVLLPHTTAEASRKIAEKIRQRLEV 357 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRV 453 + ++ G+ IA++ SIG + +++ L AD+ALY+AK+RGRNRV Sbjct: 358 SDIR-WEGKRIAVTASIGLSGTTAEESREFDSLYTEADKALYLAKQRGRNRV 408 >UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZM9_9PROT Length = 379 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 100/166 (60%), Gaps = 7/166 (4%) Query: 295 VGM-DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEIL 353 VG+ D LT + NRR+L T + E AH R +PLS + +D+DKFK IND++GHN GD+IL Sbjct: 189 VGLTDPLTGIYNRRYLETRCQEEAAHVRRYRSPLSCMFLDIDKFKRINDSFGHNIGDKIL 248 Query: 354 RKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGED 413 V+ +RS+D + RYGG+EF+++L + AERIR V + + ++ Sbjct: 249 CSVTAQIKSQLRSNDVLARYGGEEFVVLLPQTGIRGACDIAERIRRTVAEQAFQIGREDE 308 Query: 414 IALSLSIGAAMFNGHPDYE------RLIQIADEALYIAKRRGRNRV 453 + +++SIG A D + +L+ ADEALY+AK GRN+V Sbjct: 309 LKVTISIGVAQAPVDADGDERTVAHQLLAAADEALYLAKESGRNKV 354 >UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium RepID=B2V5Y5_SULSY Length = 411 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 2/253 (0%) Query: 201 LLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLN 260 +LD + S++ FG+W KG+ Y + + L +DF + +N Sbjct: 159 ILDGGIFSNISHQSCAFGIWLKEKGKEYIDEEHILKDLKHLHKDFHNLIEIAESYKKNKK 218 Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 + L +L I+N + I L + + E+ +D LT NRR I ++ + + Sbjct: 219 FKDLYF-MILNIQNIMIWIGNEFLYLNTKFIKLEMSIDPLTGAFNRRGFEIIIQKLLEIS 277 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 T P+++ + D+D FK+INDT+GH GDE L+ N+R SDYVFR GG+EF+I Sbjct: 278 QITDAPITLAMADLDYFKKINDTFGHLAGDEALKHFVNIIKRNLRKSDYVFRIGGEEFLI 337 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADE 440 +L + + ERIR +E+ L +G++I ++ S G A + +I+ ADE Sbjct: 338 LLPNTELKDAVEIVERIRKDLEENSLH-YDGKEIKITASFGLAEVDKEKYINEIIKKADE 396 Query: 441 ALYIAKRRGRNRV 453 LY AK GRN+V Sbjct: 397 KLYKAKESGRNKV 409 >UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM68_FIBSS Length = 566 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 1/159 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT+L NRR + ++E+ ANR S++ ID+D FK++NDT+GH GD +L+ V+ Sbjct: 395 DELTQLPNRRDMHRTIEKEVDRANRFKKAFSIIFIDIDHFKDVNDTYGHAAGDAVLKSVA 454 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +R D + RYGG+EF+ +L E + AER R ++E + G++I ++ Sbjct: 455 STIRSLLRKYDVLARYGGEEFLTLLPETELKDAAHVAERFRKQIENQTI-FFGGQEIKVT 513 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 +++G A F+ ER IQ+AD+ALY K GRNRV LW Sbjct: 514 ITLGVAQFDSGLGAERCIQLADKALYEGKEHGRNRVILW 552 >UniRef50_C0QS84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QS84_PERMH Length = 427 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 74/161 (45%), Positives = 99/161 (61%), Gaps = 6/161 (3%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LTK+ NRRF ++E+ A R P+S+LI+DVD FKE ND++GH GD L V+ Sbjct: 263 DELTKVANRRFFQEAVEKELKRAYRERYPVSLLIVDVDHFKEYNDSFGHTAGDRCLCSVA 322 Query: 358 QAFYD-NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 + RS D V RYGGDEFI+VL +ASE+ + A+ IRS VE +K + + Sbjct: 323 EILKKYRKRSYDLVARYGGDEFIVVLPKASEDYAMNVAQMIRSDVEDLCIKHIEPFN-RV 381 Query: 417 SLSIGAAMFNGH----PDYERLIQIADEALYIAKRRGRNRV 453 ++SIG A+ NG + LI AD+ALYIAK+ GRNRV Sbjct: 382 TVSIGVAVLNGKRIKGVTVKNLINTADKALYIAKKEGRNRV 422 >UniRef50_Q315M6 Diguanylate cyclase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q315M6_DESDG Length = 403 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 6/180 (3%) Query: 274 NTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIID 333 +T ++ L RE+ E+ + D LT LLNRR + E A A R+G+ SV++ D Sbjct: 215 HTQRTLVALTREM-EQCA----CTDPLTGLLNRRGIYDRLNEERARATRSGSTFSVILCD 269 Query: 334 VDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRT 393 VD FK +ND +GH GD +L ++++ F +VR D V R+GG+EF+ +L E E L Sbjct: 270 VDHFKNVNDCFGHQCGDHVLHQLAEHFRRSVRGQDVVCRWGGEEFLFILPETDEQGALNL 329 Query: 394 AERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 AE++RS VE+T + +G I ++LS+G E I++AD+ LYIAK GRN+V Sbjct: 330 AEKLRSTVEQTPVN-YHGMPIDITLSLGVQECTLTESTEFHIRVADQKLYIAKEHGRNKV 388 >UniRef50_Q7P127 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P127_CHRVO Length = 334 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 114/199 (57%), Gaps = 4/199 (2%) Query: 258 NLNNRSLRVKFLLQIRNTVSQIITLLRE--LFEEVSRHEVGMDVLTKLLNRRFLPTIFKR 315 +N+ S R + +++ + + + LRE L ++ R + D LT L NRR L I R Sbjct: 126 GVNDISERKRLEQSLQDANAALRSHLREIELLQQGLREQALRDPLTGLFNRRHLDDILPR 185 Query: 316 EIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGG 375 +AH ++VL++D D FK INDT+GH GD +L + D+ RS D V RYGG Sbjct: 186 VLAHMLALHREVAVLMVDADHFKRINDTYGHRCGDAVLTALGACLSDHFRSGDIVCRYGG 245 Query: 376 DEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERL 434 +EF ++L A+ AE +R V + ++A G +A++LSIG A+ H D E + Sbjct: 246 EEFFVLLPGATLEAAYAKAEGLRRAVGERPMEAL-GHSLAVTLSIGLALCPLHGSDAESV 304 Query: 435 IQIADEALYIAKRRGRNRV 453 ++ ADEALY AKR+GR+RV Sbjct: 305 VRAADEALYQAKRQGRDRV 323 >UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEB9_9SPHN Length = 600 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/158 (43%), Positives = 98/158 (62%), Gaps = 6/158 (3%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRR + + I A ++G +S+ I D+D FK IND++GH+TGDE++++V+ Sbjct: 447 DQLTGIANRRRTEFVLDQAIGAAEQSGKSVSIAIFDIDHFKRINDSYGHHTGDEVIKRVA 506 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q +RS D V RYGG+EF+IVL +A++ LR ERIR +E AAN ++ Sbjct: 507 QDAAAQLRSGDLVGRYGGEEFVIVLPDATQETALRVGERIRETIE-----AAN-SGPPVT 560 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 +SIG A + L++ AD ALY AKR GRNR+ L Sbjct: 561 ISIGVAELAQGETADALLRRADRALYSAKRAGRNRLHL 598 >UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4USH9_XANC8 Length = 578 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/158 (42%), Positives = 88/158 (55%), Gaps = 1/158 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR+L E+A R PLSVL++DVD FK+ ND GH GD +L V Sbjct: 402 DALTGLYNRRYLEEALSHELARCARRDLPLSVLMLDVDHFKQFNDGQGHAGGDLLLAAVG 461 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + +R+ D RYGG+EF ++L E E +R AE+IR + + ++ Sbjct: 462 ELLLTRLRAEDVACRYGGEEFTVILPETDGEEAMRVAEQIRGHIAALAVSDGQRALPRVT 521 Query: 418 LSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRVE 454 SIG A F + LIQ AD ALY+AKR+GRNRVE Sbjct: 522 ASIGVASFPADGELGSALIQKADAALYVAKRQGRNRVE 559 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/183 (40%), Positives = 104/183 (56%), Gaps = 8/183 (4%) Query: 276 VSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335 + +I L ++L E+ SR D LT L NRR+L T RE+A R G PLS+++IDVD Sbjct: 173 LQEIEALQQQLREQASR-----DSLTALYNRRYLDTTLDRELASCKREGKPLSLIMIDVD 227 Query: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTA 394 FK+ ND GH GD+ L V++ + R+SD RYGG+EF++VL A Sbjct: 228 DFKKYNDLHGHQAGDQCLIAVAKTLQASAKRASDLAARYGGEEFLLVLPGMDATAAQGLA 287 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMF--NGHPDYERLIQIADEALYIAKRRGRNR 452 E +R VE K+ ++++SIG A+ + H D L++ ADEALY AK GRN+ Sbjct: 288 EELRRSVEALKIPHEQSRGGSVTISIGLAVMTNDSHKDVAGLLRAADEALYHAKHGGRNQ 347 Query: 453 VEL 455 V L Sbjct: 348 VRL 350 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 110/190 (57%), Gaps = 11/190 (5%) Query: 271 QIRNTVSQIITL------LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 Q+ TV++ + L LRE EE S D LTKL NRR+L +E+A A R Sbjct: 574 QLAKTVAEQLALAIANLKLREQLEEQSLR----DPLTKLFNRRYLEQRLSQELARAKRHH 629 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 + VL+IDVD FK ND+ GH+ GD IL + +N+R+SD RYGG+E I+L + Sbjct: 630 YSVGVLMIDVDHFKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPD 689 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIADEALY 443 A+ E + AE +R + + K++ + +++ S G A + H + + +IQIAD+ALY Sbjct: 690 ATLEEASQKAEFLRQAIAEMKIEYSGKIVNSVTASFGVACYPDHGETGQEIIQIADKALY 749 Query: 444 IAKRRGRNRV 453 AK+ GRNRV Sbjct: 750 DAKQAGRNRV 759 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 1/158 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRR T+ + I+H++R +PLS+++ID+D FK+INDTWGH +GDE LR Sbjct: 224 DPLTGVFNRRSFLTLLDKSISHSDRMASPLSIMLIDLDHFKKINDTWGHKSGDEALRHFV 283 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +R+ D + R GG+EF I+L + ++ AER+R V +K +G I L+ Sbjct: 284 AVAVPCIRNGDIIGRVGGEEFAILLPDTDISKAATVAERLRCEVAARPVKNEHG-SITLT 342 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 +SIG + E + AD A+Y AK +GRN+VE+ Sbjct: 343 VSIGVTHYRKDEAPEVTLHRADNAMYTAKDKGRNQVEV 380 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 99/158 (62%), Gaps = 3/158 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR + +E+ R TP+S+ +IDVD FK+INDT+GH GD +LR+++ Sbjct: 421 DNLTGLANRRHFLQVLHQEMERNRRYHTPVSIAMIDVDHFKQINDTFGHIAGDYVLREIA 480 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + +R D + RYGG+EF ++L E + + L+ ER+R+ + T + +G I + Sbjct: 481 RRCRQQLRDVDVLARYGGEEFGLILPETTYEQALKATERLRTVLATTPIM-IDGRQINPT 539 Query: 418 LSIGAAMFNG--HPDYERLIQIADEALYIAKRRGRNRV 453 +SIG A F+ +PD LI AD ALY+AK++GRNRV Sbjct: 540 ISIGVASFHPTVYPDPSSLIADADRALYLAKQQGRNRV 577 >UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9S7_SPHTD Length = 1765 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 3/169 (1%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 LF EV R V D LT NRR L T +RE++ A R PL+ +I+D+D+FK +ND G Sbjct: 1596 LFAEVQRLAV-TDDLTGTYNRRHLLTTAERELSRAQRFNRPLAAIILDIDEFKRVNDAHG 1654 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GDE+LR V+ +R D + RYGG+EF+I+L E + AER+R+ + Sbjct: 1655 HAVGDEVLRAVADRLRSGLREVDVLGRYGGEEFVIILPETDLISAYQIAERLRNSIAAEP 1714 Query: 406 LKAANGEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRV 453 + + G +++++S+G A + PD+ L+ D+ LY AKRRGRNRV Sbjct: 1715 IATSTGP-VSVTISLGVAAADPTTPDFASLLSRIDDLLYTAKRRGRNRV 1762 >UniRef50_D0KZW3 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZW3_HALNC Length = 547 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 93/163 (57%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT LLN + + + EI ANR PLSV++ID+D FK +NDT+GH GD ++RK+S Sbjct: 377 DSLTGLLNHNAIKDLVEAEIDRANRQNQPLSVVLIDIDHFKNVNDTFGHQAGDIVIRKLS 436 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +R D V RYGG+EF+I L E R+R + ++ ++ NG ++ + Sbjct: 437 NLLNTRLRRYDGVGRYGGEEFMITLPNTDEQTAAHLINRLRVQFGQSAIRTENGSNMLCT 496 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 S G A F D LI+ AD+ LY+AK GRNRV + +L Sbjct: 497 FSAGIASFPRFLDLTSLIEAADQHLYVAKANGRNRVVCSEEAL 539 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/156 (41%), Positives = 96/156 (61%), Gaps = 1/156 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRR+ EI RTGTPLSV+++D+D FK++NDT+GH+ GD++L +V+ Sbjct: 315 DPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVNDTYGHHVGDQVLMEVA 374 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q + R SD V R+GG+EF+I+L + N AE+IR +E A G +++++ Sbjct: 375 QTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLSFPTAEG-NVSVT 433 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 S G + + G +R++ AD ALY AK GRN V Sbjct: 434 ASFGVSQWQGETKIDRVVSRADAALYQAKHDGRNCV 469 >UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVY6_CHLT3 Length = 440 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/190 (41%), Positives = 104/190 (54%), Gaps = 10/190 (5%) Query: 276 VSQIITLLRELFEEVSRHE------VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSV 329 +S++ LR L +EV V D TKL N R F E+A A R PLS+ Sbjct: 247 ISKLARTLRHLGKEVEEKTNELNQMVITDEKTKLFNFRHFKQEFLIEVARAKRFNEPLSL 306 Query: 330 LIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENE 389 ++IDVDKFK NDT GH GD++L KVS R +D R+GG+EF +L E Sbjct: 307 IMIDVDKFKHYNDTNGHMLGDQVLIKVSALLKKECRETDVPARFGGEEFAALLPRTDAKE 366 Query: 390 TLRTAERIRSRVEKTKL---KAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAK 446 + AERIRS +E ++ KA G ++ SL + F+ + D E LI ADEALY AK Sbjct: 367 AFQVAERIRSSIETSEFENQKAQPGGNLTASLGVATFPFDAY-DAEALIIAADEALYRAK 425 Query: 447 RRGRNRVELW 456 GRNRVE++ Sbjct: 426 ENGRNRVEVY 435 >UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquificaceae RepID=A8UT68_9AQUI Length = 620 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 105/177 (59%), Gaps = 8/177 (4%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E+ + + +D LT L NRRFL I + A R GT L +L+ID+D FK+IND +GH+ Sbjct: 442 ELLQQQSYIDQLTGLYNRRFLDEIADKLSAQVKRRGTSLGILMIDIDYFKQINDKYGHDV 501 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD +L++++ +VR +DYV R+GG+E +++L + E + AE+IR +E ++ Sbjct: 502 GDRVLKEIASIIKSSVREADYVIRFGGEEILVLLVDVREGTAKKVAEKIRRAIENKVIEI 561 Query: 409 ANGEDIALSLSIGAAMFNGHPD--YERLIQIADEALYIAKRRGRNRV-----ELWKA 458 + G I ++SIG + F D + + I+ AD ALY AK GRNRV E+W Sbjct: 562 SGGV-IKKTVSIGVSEFPKDCDGKFWQCIKFADVALYRAKEEGRNRVVRFTPEMWSG 617 >UniRef50_B9ZND9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZND9_9GAMM Length = 446 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/228 (37%), Positives = 120/228 (52%), Gaps = 16/228 (7%) Query: 234 EVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE-EVSR 292 E+G ++R FNQ MR N N LR + R LLR+ E E S Sbjct: 206 EIGELARR-------FNQ-MRAQLNTANEQLRGRVEAADRELKEAYDQLLRQQSELEASN 257 Query: 293 HEVGM----DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E+ D LT L NRR ++++A R G P S+LI+D+D FK+INDT GH Sbjct: 258 MELEQLTLTDPLTGLGNRRAFQEAIEKDVALFRRHGDPASLLILDLDAFKQINDTHGHEG 317 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD ILR+ ++ D VR++D V R GG+EF + L A + L AE +R V ++ Sbjct: 318 GDRILRRFAELLQDRVRTTDLVCRLGGEEFAVFLRRAEPEDALAIAEALREAVAAMEVAL 377 Query: 409 ANGEDIALSLSIGAAMFNGHPDY---ERLIQIADEALYIAKRRGRNRV 453 +G ++++SIG A + D L + AD+A+Y +KRRGRNRV Sbjct: 378 DDGARASITVSIGVAWLSLEDDLTTTRALCRAADQAMYASKRRGRNRV 425 >UniRef50_C6HZW1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZW1_9BACT Length = 1992 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 123/214 (57%), Gaps = 18/214 (8%) Query: 253 MRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTI 312 + R+ ++LR F+L +R+ ++ II L + FE HE D LT L NRR L Sbjct: 1085 LTPARSREGKALR--FVLVLRD-ITDIIDLTKR-FE----HEALHDSLTGLPNRRALDAT 1136 Query: 313 FKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFR 372 +R +A A+RT TPL++ I+D+D FK +NDTWGH GD +LR+++ F ++R D++ R Sbjct: 1137 LERTLARADRTKTPLAIAILDLDDFKPVNDTWGHPAGDALLREIAARFSASLRGGDFLAR 1196 Query: 373 YGGDEFIIVLTEAS----ENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF--N 426 GGDEF ++L S E++ + A RI VE + + G+ + +S+G A F + Sbjct: 1197 IGGDEFALILDLTSDLALEDQVVAFAARIHRAVE-SPFEVEPGQSATVGMSMGVAFFPRD 1255 Query: 427 GH-PDYERLIQIADEALYIAKRRGRNRVELWKAS 459 G PD L++ AD+ALY AK R R W++ Sbjct: 1256 GETPDA--LLRQADQALYQAKSHKRTRDRWWQSG 1287 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 97/157 (61%), Gaps = 4/157 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR+L K+E+ A R L +++IDVD FK +NDT+GH+ GD++L+K+ Sbjct: 328 DALTGLYNRRYLEESLKKELERAKRKERSLGIIMIDVDHFKNVNDTFGHDKGDQVLKKLG 387 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 ++R SD RYGG+E ++L EAS T + AE++R V+ L D L+ Sbjct: 388 GFLQRHIRGSDIACRYGGEELTLILPEASLENTRQRAEQLRQAVKNLDLDLC---DHTLT 444 Query: 418 LSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRV 453 +S+G A F H + L++ AD+ALY AK++GR+RV Sbjct: 445 ISVGIACFPEHGYSGKALLKTADQALYQAKQQGRDRV 481 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 121/207 (58%), Gaps = 9/207 (4%) Query: 248 IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRR 307 + N+ M +R+ + + LR+ S IT ++L EE+ R + +D LT + NRR Sbjct: 388 LLNRGMVISRSSDGKPLRMI-------GTSTDITERKQLEEELKR-QARIDFLTGVSNRR 439 Query: 308 FLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS 367 + ++EI +R TPLS ++D+D FK++NDT+GH +GD +L++++ + +R Sbjct: 440 YFMEQAEQEIQRTSRYDTPLSFFMLDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLREI 499 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG-AAMFN 426 D + R GG+EF I+L E + + AER+RS + K+ G I ++SIG A+ + Sbjct: 500 DIIGRVGGEEFAILLPETDKAQAAEVAERLRSVLADEKVPTEAGAPIQFTVSIGVASRVS 559 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRV 453 + + L+ +ADEALY AK+ GRNRV Sbjct: 560 SQDNIDMLLNLADEALYQAKKYGRNRV 586 >UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5H6_9NEIS Length = 650 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 7/183 (3%) Query: 272 IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 +R +++I +L L E++ R D LT + NRR+L R +AH G P+++L+ Sbjct: 456 LRQHLNEIESLQSGLKEQLVR-----DPLTGVFNRRYLDDALPRVLAHTLALGKPVALLM 510 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 +D D FK INDT+GH GD +L + D++RS+D V RYGG+EF+IVL S + Sbjct: 511 LDADHFKRINDTYGHKAGDCVLSTLGARLRDSLRSNDMVCRYGGEEFLIVLPGMSLEHAI 570 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGR 450 AE++R V++ ++A + + +++SIG A H D E L+ AD ALY+AK GR Sbjct: 571 AKAEQLRKVVQQWPIEALD-HTLNVTVSIGVACSPLHAEDAESLVHAADTALYVAKSSGR 629 Query: 451 NRV 453 +R+ Sbjct: 630 DRL 632 >UniRef50_Q1D817 HAMP domain/GAF domain/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D817_MYXXD Length = 645 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 98/165 (59%), Gaps = 2/165 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRR L + E+A +NR GTPL++L++DVD FK IND GH GDE LR+V Sbjct: 448 DPLTGVPNRRHLFQRMELELARSNRFGTPLALLMVDVDHFKRINDLAGHRVGDETLRRVC 507 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV-EKTKLKAANGEDIAL 416 VR D + RYGG+EF+I+L + ++ E + AE++R V E +L + Sbjct: 508 DVLRLRVRKVDTLARYGGEEFVILLPQTNKAEAMEVAEKLRRAVAESVELVQPGLPGNHV 567 Query: 417 SLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVELWKASL 460 ++SIGA+ F E L+ AD ALY +KR GRNR ++A + Sbjct: 568 TVSIGASHFPSDASAQEELVDCADAALYFSKRTGRNRTTQYEAGM 612 >UniRef50_C6BSU0 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSU0_DESAD Length = 333 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 101/188 (53%), Gaps = 7/188 (3%) Query: 268 FLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 F L I +TV+ I LF + D LT L RR+L + EI R G PL Sbjct: 148 FQLGIISTVAAISIENSRLFRQTIE-----DSLTGLYMRRYLFIRMREEIQRFKRRGGPL 202 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS-DYVFRYGGDEFIIVLTEAS 386 SV++IDVD FK +NDT+GH TGD +LR V ++N R D RYGG+EF+I++ + Sbjct: 203 SVIMIDVDNFKNVNDTYGHATGDAVLRSVGHILHENSRQGVDIPCRYGGEEFVILMPGSE 262 Query: 387 ENETLRTAERIRSRVEKTKLKAANGE-DIALSLSIGAAMFNGHPDYERLIQIADEALYIA 445 + E AERIR+ E + A G+ I S I + P + L+ IAD+ LY A Sbjct: 263 KREAEIVAERIRAACEDATISAPEGKIKITASCGIASVEECQEPSADALLNIADKRLYCA 322 Query: 446 KRRGRNRV 453 K GRNRV Sbjct: 323 KESGRNRV 330 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/195 (39%), Positives = 110/195 (56%), Gaps = 4/195 (2%) Query: 261 NRSLRVKFL-LQIRNTVSQII-TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIA 318 N +L V L L+ N +Q++ LRE E + R V D LT L NRR F+ E Sbjct: 412 NENLEVTTLALKEANAENQLLLERLREQAETLERL-VTYDGLTGLANRRHFDEQFEYEFR 470 Query: 319 HANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEF 378 R PLS+ + D+D FK++ND + H GDE+L+KV+ F +NVR+ D V RYGG+EF Sbjct: 471 RTRRYKRPLSIAMSDIDFFKKVNDNFSHQVGDEVLKKVASIFRENVRAGDLVARYGGEEF 530 Query: 379 IIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIA 438 + + TE ++ +R AE+IR +E + + +++SIG A G + LI A Sbjct: 531 VFIFTETNKESAIRAAEKIRKAIEDYDWSNVHA-GLKVTISIGVAEDAGFDGCDELIAAA 589 Query: 439 DEALYIAKRRGRNRV 453 D LY AKR GRN+V Sbjct: 590 DSKLYEAKRNGRNQV 604 >UniRef50_A9B0R4 Diguanylate cyclase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B0R4_HERA2 Length = 582 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 3/164 (1%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D LT L NRR + + + A + G L++L+ D+D FK+IND GH+ GD++L+ V Sbjct: 420 IDSLTGLYNRRHFLGLAQSLLEQAWQAGNALAILLFDIDHFKQINDRHGHHIGDQMLQLV 479 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 + +R SD + RYGG+EF+++LT S E L AER+RS +E+ L N + + Sbjct: 480 ATTAQAALRQSDLLGRYGGEEFVVMLTRVSNAEALLVAERLRSAIEQLILT-DNQQSVTT 538 Query: 417 SLSIGAAMFNGHPD--YERLIQIADEALYIAKRRGRNRVELWKA 458 S+S+G + H + ERLIQ AD ALY AK GRN V+++ A Sbjct: 539 SISVGLTLSYPHAEIPLERLIQQADHALYQAKAAGRNNVQIYSA 582 >UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QSI7_PERMH Length = 423 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 16/190 (8%) Query: 272 IRNTVSQI----ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 ++N +S I + + RE E+ R D LT LLNR + I R I + + TP Sbjct: 240 VKNVLSMISIFTVAIARENIEKSRR-----DPLTDLLNRTVMDMIIARTIEISKISETPF 294 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 S+ ++DVD FK INDT+GH GD +L+++++ ++R SD+VFRYGG+EF+++L Sbjct: 295 SIAMLDVDNFKRINDTYGHIVGDCVLKEIAKIIKKSLRKSDFVFRYGGEEFLVLLPSTDS 354 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD----YERLIQIADEALY 443 R ER R +EK +K + I +++SIG + +PD +++IQ AD+ LY Sbjct: 355 KHAYRIMERTRKNIEKASIK-CDSHKINVTISIG--LITVYPDETLNIKQIIQKADQNLY 411 Query: 444 IAKRRGRNRV 453 AK++G+N V Sbjct: 412 TAKKKGKNLV 421 >UniRef50_A1HRZ7 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRZ7_9FIRM Length = 794 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/163 (43%), Positives = 97/163 (59%), Gaps = 7/163 (4%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR K E+ + PLS+++ D+DKFK NDT+GH TGD++L ++ Sbjct: 625 DGLTGLANRRNFDMFLKAELRRSFTLKRPLSLIMFDLDKFKTYNDTYGHLTGDKLLAQIG 684 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA-L 416 + NVRS D RYGG+EF I+L E + E L AE++R VE+T G A + Sbjct: 685 EILRHNVRSIDLPARYGGEEFSIILPECTNAEALAIAEKLRQIVEETHFPDNLGAFTARI 744 Query: 417 SLSIGAAMFN------GHPDYERLIQIADEALYIAKRRGRNRV 453 + S+G A ++ G PD E LI AD+ALY AK++GRNRV Sbjct: 745 TASLGVATYDPAITSGGVPDMEDLIAWADKALYQAKQQGRNRV 787 >UniRef50_C6MGF9 Diguanylate cyclase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGF9_9PROT Length = 558 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/159 (42%), Positives = 95/159 (59%), Gaps = 6/159 (3%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NR L I ++A R P +VL+IDVD FK ND GH GDE++ V+ Sbjct: 389 DSLTGLYNRNKLNVIISDQLARYERNKRPFAVLMIDVDHFKTFNDNLGHVAGDEVIAAVA 448 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + ++R+ D+ RYGGDEFII+LTE + NE ++TAERIR++V + N + + ++ Sbjct: 449 KKISQSIRNVDFAARYGGDEFIIILTETAVNEAMKTAERIRAQVANVHCSSLN-KTLRVT 507 Query: 418 LSIGAAMFNGHPD---YERLIQIADEALYIAKRRGRNRV 453 LSIG + P+ L+ D ALY AKR GRN+V Sbjct: 508 LSIG--IIQSEPEDISLTTLLARVDSALYQAKRSGRNQV 544 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 100/180 (55%), Gaps = 6/180 (3%) Query: 274 NTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIID 333 + Q++ LLR L+ + +R D LT L NRR L +RE A RTG PL+VL+ D Sbjct: 200 SVAGQLLMLLR-LYRQATR-----DPLTGLFNRRALTEQIERERARFLRTGRPLTVLLFD 253 Query: 334 VDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRT 393 +D+FK IND GH GD +L+ + N+R++D+ R+GG+EF+ L E + + Sbjct: 254 LDRFKRINDHHGHLVGDRVLQVFANVVQQNLRTTDHFGRWGGEEFLAALPETTSEQARVV 313 Query: 394 AERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 AER+R E +L A G + + SIG A + + L DEALY AK GRNRV Sbjct: 314 AERVRQACENERLTLAEGPSLGFTTSIGVATLHRDETLDSLFNRVDEALYNAKAYGRNRV 373 >UniRef50_D0KF92 Diguanylate cyclase n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KF92_PECWW Length = 489 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 12/200 (6%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEV-------GMDVLTKLLNRRFLPTIFKREIA 318 + +L QI +V I L F +R + D LT +LNRR L I Sbjct: 278 LSYLFQINTSVIIITALTASFFINGNRKNIKRIELISNHDALTGMLNRRSLNQ-HMMNII 336 Query: 319 HANRTG--TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 ++ R G +S+L++D+D FK+INDT+GH GD ++R S A + R D + R+GG+ Sbjct: 337 NSIRDGENKMMSLLVLDIDHFKKINDTYGHAVGDNVIRGFSTAIKQHTRPQDLLCRWGGE 396 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH--PDYERL 434 EF+I++ S+NE L AERIR+ +E + L +NG + + SIG + F+ D+ Sbjct: 397 EFLIIIQGLSKNECLEIAERIRTIIEGSSLAISNGHAVRCTTSIGVSFFHLERIEDFHDA 456 Query: 435 IQIADEALYIAKRRGRNRVE 454 + AD+ LYIAK +GRNRV Sbjct: 457 FKEADKLLYIAKEQGRNRVN 476 >UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UW14_9AQUI Length = 218 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 66/156 (42%), Positives = 93/156 (59%), Gaps = 4/156 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR + E A R GTPLSV +ID+D FK INDT+GH GDE+L+ ++ Sbjct: 64 DPLTGLPNRREIMNFLDFEFNRAKRNGTPLSVAVIDLDDFKFINDTYGHVAGDEVLKSLA 123 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 N+RS+D V R+GG+EF++V+ + N ++ ER+R VE+T + ++S Sbjct: 124 SLIRRNLRSTDMVGRFGGEEFVVVMPDTPLNTAVKVMERLRRVVEETYFEPIG----SVS 179 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +S+G A D L+ AD LY AKR G+NRV Sbjct: 180 ISVGVAQLREGDDVSNLLSRADGKLYQAKREGKNRV 215 >UniRef50_A8MF63 Diguanylate cyclase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MF63_ALKOO Length = 1822 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 97/162 (59%), Gaps = 4/162 (2%) Query: 296 GMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRK 355 +D +T R++ IF EI A + PLS++++D+D FK +ND +GH GD IL + Sbjct: 1479 NIDRMTGAYTRKYFEQIFDEEIEQAKESNQPLSIIMLDIDHFKNVNDIYGHQKGDNILTE 1538 Query: 356 VSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA 415 V + N+RS+D+V RYGG+EF+I+L S + AE+IR +V+ T L G+ Sbjct: 1539 VGRIIKSNIRSTDHVGRYGGEEFVIILPNTSNMDAFHVAEKIRLKVQSTNLL---GKAEV 1595 Query: 416 LSLSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRNRVELW 456 L++S G + F + + ++I+ AD+ALY AK GRNR W Sbjct: 1596 LTISCGISTFPIDSNKQLQIIEKADQALYHAKENGRNRSVRW 1637 >UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZN3_9GAMM Length = 395 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 112/201 (55%), Gaps = 5/201 (2%) Query: 263 SLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGM-DVLTKLLNRRFLPTIFKREIAHAN 321 + V F+ + VS + L R ++ E + + D LT L NRR L F E+A A Sbjct: 191 AFSVPFVAGVLTLVS--LLLRRWVYREAQVRAMAVQDPLTGLSNRRALFDQFAHEMARAR 248 Query: 322 RTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIV 381 RTG LSV ++D+D FK+IND GH GD +L +V+ + +R +D + R GG+EF++V Sbjct: 249 RTGEALSVCVMDLDHFKQINDRHGHAAGDTVLVRVANLLRECLRETDRIGRIGGEEFVLV 308 Query: 382 LTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG--AAMFNGHPDYERLIQIAD 439 L + + ER R+ + T + GE + +S S G A+ +L+ AD Sbjct: 309 LPDTGHEGAEKVIERCRAALVGTPVMLDVGEPLTVSASFGVVTALAGEQATESQLVSRAD 368 Query: 440 EALYIAKRRGRNRVELWKASL 460 +ALY+AK+RGRNRVE W +++ Sbjct: 369 DALYLAKKRGRNRVEFWSSAM 389 >UniRef50_C1D269 Putative metal dependent phosphohydrolase n=2 Tax=Deinococcus deserti VCD115 RepID=C1D269_DEIDV Length = 1251 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 97/156 (62%), Gaps = 1/156 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRRF+ E +G PL++L++D+D FK+IND + H GDE+LR+V+ Sbjct: 1095 DALTGVYNRRFIEENVTIEYERHRNSGQPLAILMVDIDHFKQINDRFSHPVGDEVLRRVA 1154 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + F + R++D + RYGG+EF+ +L ++ + AERIRS +EK + ED+ ++ Sbjct: 1155 RIFRETCRANDLIGRYGGEEFLFLLPNSNVRQAAEVAERIRSNIEKYAWHEIH-EDLRVT 1213 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 LS+G ++E++I IAD LY AK GRNRV Sbjct: 1214 LSLGICADTNVVNHEKMISIADAKLYEAKTGGRNRV 1249 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 115/191 (60%), Gaps = 5/191 (2%) Query: 265 RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 R++FL N +Q+ ++ E +E+ + D LT+L NRR + E R+ Sbjct: 813 RIRFL---NNQRAQLELMVAEKTKEL-KGLARQDSLTQLGNRRAFDEQLQYEFKRCERSE 868 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 PLS+ IIDVD FK IND + H GD++L ++S + +R DY+ R+GG+EF +++ E Sbjct: 869 QPLSLAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNMLRDIDYIARWGGEEFALLMPE 928 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYI 444 + E L+ AERIR R+E T + +++A+++SIG A +P++ L+ AD+ALY Sbjct: 929 TTAKEALQAAERIRQRIEDTSYQHL-ADELAVTVSIGVASSEHYPNHSALLVAADKALYK 987 Query: 445 AKRRGRNRVEL 455 AK+ GRNR EL Sbjct: 988 AKQSGRNRTEL 998 >UniRef50_B6ESF0 Membrane associated GGDEF protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ESF0_ALISL Length = 712 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 4/156 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR + T ++ + RT PLSV++ D+D FK+INDT+GH GDE++ +S Sbjct: 558 DSLTSLYNRRVIDTHLVKQQKLSLRTDMPLSVIMCDIDYFKKINDTFGHIAGDEVIVNMS 617 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +N+R+SD V R+GG+EFII+ + AE +R ++E K+ A N + I + Sbjct: 618 ALLLNNIRTSDIVGRWGGEEFIIICPNTHSSGAKVLAECLRKKIE--KMPATNEQTI--T 673 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +S G A FN + YE L+ AD ALY AK +GRN+V Sbjct: 674 MSFGIAQFNENLSYEELLIKADAALYAAKEQGRNKV 709 >UniRef50_A5N950 Predicted signal transduction protein containing GGDEF domain n=2 Tax=Clostridium kluyveri RepID=A5N950_CLOK5 Length = 289 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 76/182 (41%), Positives = 102/182 (56%), Gaps = 5/182 (2%) Query: 274 NTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIID 333 N + +T L + +SR +D LTKL NRR L F+ EI + T S+ I D Sbjct: 112 NKANLKLTRLNMYLDNMSR----IDPLTKLSNRRDLRQKFECEIKKVSTRPTSFSLAIGD 167 Query: 334 VDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRT 393 VD FK INDT+GH GDE+L+K++ F +N+R D + RYGG+EF+I L E L Sbjct: 168 VDFFKNINDTYGHGCGDEVLKKIACIFKNNLRKEDVISRYGGEEFVIFLPETDLKYALSV 227 Query: 394 AERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 E IRS ++ + NGE +++S G FN + I+ AD ALY AK RGRNRV Sbjct: 228 IENIRSIIQNETFE-YNGEIFHMTISFGLVNFNHSISFIECIERADSALYEAKVRGRNRV 286 Query: 454 EL 455 L Sbjct: 287 VL 288 >UniRef50_UPI00016982CA diguanylate cyclase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016982CA Length = 258 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 2/157 (1%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D LT + NR + F RE+ A+R GT LS++++DVD FK IND +GH GD +L+ + Sbjct: 100 IDALTGVKNRAAFVSNFNRELDLASRNGTELSIIMLDVDYFKRINDKYGHTVGDMVLKNI 159 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 + A +VRSSD ++RYGG+EF+I L+ + AERIR VE + G + Sbjct: 160 ALAVEASVRSSDALYRYGGEEFVITLSGTCAEGAYQLAERIRKNVEALSFSSPKG--LQA 217 Query: 417 SLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 LS+G A + E L + AD ALY AK +GRN+ Sbjct: 218 RLSLGVATLQKNESGETLFKRADAALYCAKGQGRNQT 254 >UniRef50_B9L5N3 Ggdef domain protein n=1 Tax=Nautilia profundicola AmH RepID=B9L5N3_NAUPA Length = 549 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/185 (41%), Positives = 107/185 (57%), Gaps = 5/185 (2%) Query: 274 NTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIID 333 N VS II L E+ ++ D LT L NRR L I IA A R L+ L+ID Sbjct: 357 NEVSAIIEAKYTL--ELLHNQSIKDPLTNLFNRRHLENILPMLIAAAQRRNEKLAFLMID 414 Query: 334 VDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE-ASENETLR 392 +D FK +NDT+GH GD +L+ ++ +NVR SD V RYGG+EF+I+L S + + Sbjct: 415 MDYFKTVNDTYGHKAGDTVLKTLANILINNVRKSDIVIRYGGEEFLIILQNIKSYEDAIN 474 Query: 393 TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRN 451 AE+IR+ +E TK++ N I ++SIG ++F H I+ AD ALY AK GRN Sbjct: 475 IAEKIRTSIENTKIQLDNTV-IQKTISIGISLFPEHCKQGWECIKYADIALYKAKENGRN 533 Query: 452 RVELW 456 +V L+ Sbjct: 534 QVVLF 538 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 131/237 (55%), Gaps = 17/237 (7%) Query: 228 YF--SGIAEVGHISRLIQDFDGIF------NQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 YF SGI + ++ +++ +G+ ++ M N + N+ L + VS Sbjct: 135 YFPGSGIKQGSYLGVPLKNQEGVIIGVLNAHKPMVNGFSKNDLRLFAAVAENVAIAVSNA 194 Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 +TL + +R + D LT L NRR+ F+RE+ + R G +S+++ID+D FKE Sbjct: 195 MTL------QQTRELIRKDELTGLYNRRYFFERFEREVYRSRRYGRTISLMMIDIDHFKE 248 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 ND++GH GD +L+ +S+ F ++R D V RYGG+EF+++L E S +R AE++R Sbjct: 249 YNDSYGHLRGDRVLKTISRIFESSLRKIDVVARYGGEEFLVLLPETSRENAIRVAEKLRQ 308 Query: 400 RVEKTKLK--AANGEDIALSLSIGAAMFNGHPDYERL-IQIADEALYIAKRRGRNRV 453 VEK A N AL+++IG + + L + +AD+ALY+ K +GRN+V Sbjct: 309 AVEKVDFNEDAPNLGPCALTITIGVSAIPDDANEPILALDLADKALYMGKAQGRNQV 365 >UniRef50_B8KPY0 Sensory box/ggdef domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPY0_9GAMM Length = 209 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 69/171 (40%), Positives = 101/171 (59%), Gaps = 2/171 (1%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+L E+ R D LT + NRR L ++E+ + RTG PLS++ +D+D FK +ND Sbjct: 37 RKLMEDELRELTLHDPLTGVANRRLLQDEGQKELQRSQRTGAPLSMMAVDIDFFKAVNDR 96 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+ GD L+KV++ R D V R GG+EF ++L S + AER+R + + Sbjct: 97 YGHHIGDLALKKVAELCQSVTREYDLVSRTGGEEFTVLLPHTSLEQAHALAERMRCAIAE 156 Query: 404 TKLKAANGEDIALSLSIG-AAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 + N +I L++SIG AA+ + H E L Q+AD+ALY AK GRNRV Sbjct: 157 S-CAVLNEHEIKLTVSIGVAALLSAHQSIEELSQLADDALYRAKNAGRNRV 206 >UniRef50_A6Q580 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q580_NITSB Length = 332 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/226 (34%), Positives = 126/226 (55%), Gaps = 11/226 (4%) Query: 237 HISRLIQDFDGIFNQTMRNTRNLNNRSLRV-----KFLLQIRNTVSQIITLLRELFEEVS 291 H L + D I N+ +L N+ ++ K +I + ++I ++ + F++ Sbjct: 113 HNGYLNESVDAIQNRDDERIEDLKNKVEQLEEENKKLKQEIEKSKKKLI-VIEDAFKQQE 171 Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 + V D LT L NR L K+EI P SV+IID+D FK+INDT+GH GD+ Sbjct: 172 KEAV-HDPLTNLYNRNAL----KKEIKLLEEASLPYSVIIIDIDDFKKINDTFGHIAGDK 226 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +LR++ + F+ VR V+RYGG+EF+I+L + + A+R++ + + +G Sbjct: 227 VLRELGEIFHTYVRKDSKVYRYGGEEFLIILLHTDIDGAKKLAQRLKEVISHHTIVLDDG 286 Query: 412 EDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 +I ++ S G A G +ER+++ AD+ALY AKR G+NRVE+ K Sbjct: 287 TNIIVTASFGIAQKKGDESFERVLKRADQALYKAKRDGKNRVEVSK 332 >UniRef50_C6MLU9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. M18 RepID=C6MLU9_9DELT Length = 465 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 17/173 (9%) Query: 286 LFEE---VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 L+EE VS H D LT L NRRFL ++ A R G SV+++D+D FK ND Sbjct: 299 LYEETKSVSLH----DPLTGLANRRFLDIQLEKVFELARRHGENQSVIMLDIDHFKIYND 354 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 T+GH GD++L +++ +R SD+VFRYGG+EF+ +L + AER+R+ VE Sbjct: 355 TYGHQGGDQLLVRLAGILKAQMRKSDFVFRYGGEEFLALLPDTDLPMACDAAERVRAAVE 414 Query: 403 KTKLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNRVE 454 + + +++S+G A + +G PD E L++ AD ALY AK RGRNRVE Sbjct: 415 R---------EAGVTISLGVAAYRDGMPDKEALVRAADAALYRAKERGRNRVE 458 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 127/218 (58%), Gaps = 4/218 (1%) Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRE--LFEEVSRHEVGMD 298 LI+ F+ T+ + N RV+ L+++ T Q+ L++E + R D Sbjct: 97 LIEAFEKGAADTITHPFNPAEILARVRTHLELKQTQKQLNRLVKEHEKLANLLRKLAITD 156 Query: 299 VLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQ 358 LT L NRR T+ +E A+R +S+L+ID+D FK+IND +GH GDE+L+ V++ Sbjct: 157 PLTGLWNRRHFLTVAYQEFNRASRYKRFMSILMIDIDHFKQINDEYGHTMGDEVLKGVAK 216 Query: 359 AFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSL 418 + ++R +DY R+GG+EF+ +L E + +R AER+R R+E+ + + + + +++ Sbjct: 217 SIVGSLREADYCGRFGGEEFVTLLPETDSSGAVRVAERLRKRMEQITIGIGD-KQVQMTV 275 Query: 419 SIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++G A + + E +IQ A++ALY AK +G NRV L Sbjct: 276 TVGVASYQLDDANIEVIIQRANKALYHAKSQGYNRVAL 313 >UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q085X7_SHEFN Length = 357 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 66/156 (42%), Positives = 95/156 (60%), Gaps = 1/156 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR TI ++E + +R PLSVL+ D+D FK +ND +GHN GD +L ++S Sbjct: 193 DPLTTLANRRNALTILQQEKSRISRNNEPLSVLLCDLDHFKMVNDKYGHNCGDMVLTELS 252 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q F +VR D V R+GG+EF+ +L + S + AE+IR+ V K+ E I+L+ Sbjct: 253 QVFKQSVRQQDCVARWGGEEFLFILPQTSAEQASVIAEKIRTNVHHHKVHFLKHE-ISLT 311 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +SIG + + + LI AD LY AK+ GRN+V Sbjct: 312 ISIGISQLTDDQNIDELINNADRNLYQAKKNGRNQV 347 >UniRef50_Q1D1X1 FHA/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D1X1_MYXXD Length = 307 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 66/173 (38%), Positives = 105/173 (60%), Gaps = 8/173 (4%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R ++E +R D LT++ N+++ ++E ++ R PLS+++ DVD FK+IND Sbjct: 134 RSIYESATR-----DGLTRVYNKKYFLETVRKEFSYCLRHRVPLSLVLFDVDHFKKINDA 188 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GD +L +++Q D VR+ D + RYGG+EF ++L E++E++ L AER R V+K Sbjct: 189 YGHPAGDYVLTRIAQRVSDTVRTEDLLARYGGEEFALMLRESAEDQALACAERCRYAVDK 248 Query: 404 TKLKAANGEDIALSLSIGAAMF--NGHPDYERLIQIADEALYIAKRRGRNRVE 454 +G I +++S+G A + E LI AD+ LY AKR GRNRV+ Sbjct: 249 ADF-VFSGTPIKVTISLGVATLLDSDFSQPEDLIAAADKYLYRAKRAGRNRVD 300 >UniRef50_C1DCC5 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCC5_LARHH Length = 601 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 82/232 (35%), Positives = 126/232 (54%), Gaps = 6/232 (2%) Query: 226 RHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQ-IRNTVSQI---IT 281 R FS E ++ + GI + M++TR ++ LQ R+ V + I Sbjct: 365 RERFSRYGEEVALTHDVVGLHGILGRLMQDTRAIHTDLASAHDELQGARHQVEAVNARIE 424 Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 LL E S ++ D LT LNRR L F RE + A R+G PL++ +ID+D FK++N Sbjct: 425 LLEAELVEAS-TKIKEDQLTGALNRRGLDEQFMREASRAERSGQPLALALIDIDNFKQLN 483 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 D +GH TGD LR V + VR SD V R+GG+EF++++ + S+ + L ER++ + Sbjct: 484 DRYGHRTGDNALRYVVDLVSERVRPSDAVARFGGEEFVVLMPDTSQEQALELIERLQRDL 543 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 KT AN + + ++ S G A+++ LI+ AD A+Y AK G+NRV Sbjct: 544 TKT-FFLANEDRLVITFSAGIAVWSAGESELDLIERADHAMYRAKLAGKNRV 594 >UniRef50_C6NTI5 Response regulator/GGDEF domain protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTI5_9GAMM Length = 635 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 98/167 (58%), Gaps = 2/167 (1%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 R D LT L NRR++ +E A A R G L+VL++D+D FK+IND GH++GD Sbjct: 461 RQAALTDPLTALRNRRYVTERLAQEWAAAQRHGKTLAVLLLDLDNFKQINDELGHHSGDA 520 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +LR+++ + R D + R GGDEF+++ E + + AERIR + + ++ A Sbjct: 521 VLRQLAATLQAHARMQDVLCRVGGDEFLVICPETTLDGARTMAERIRQALLELRVPGAES 580 Query: 412 EDIALSLSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRVELWK 457 D LSLSIG A D E L+Q AD ALY AK GRNRVE+++ Sbjct: 581 AD-GLSLSIGIATNGAEVDSPEALLQAADRALYRAKSHGRNRVEVYQ 626 >UniRef50_C6MBM6 Diguanylate cyclase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBM6_9PROT Length = 637 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 17/239 (7%) Query: 223 HKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLL--------QIRN 274 H+ Y+S + HI+ I+D + + M++T+ + N L+ + L + +N Sbjct: 385 HEKLEYYS--ERINHINN-IEDINQLLADIMQDTQKVQNNVLKYRNDLVFARAEINEAQN 441 Query: 275 TVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 ++Q+ T L+E+ E+V D LT LNRR F+REI R+ L ++D+ Sbjct: 442 QINQLETQLQEMSEQVQE-----DHLTGALNRRGFDKAFEREITQLARSQGTLCFALLDI 496 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FK++NDT GH+ GD+ L+ + +A + VR D + RYGG+EF I+L + + T Sbjct: 497 DNFKQLNDTHGHHVGDDALKYLVEAVKETVRRDDVISRYGGEEFAILLPNSGLKAAISTV 556 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 RIR + K N + ++ S G A + E L + DEALY AKR G+N++ Sbjct: 557 ARIRRYLTKKFFLHGNNR-LLITFSAGVAQYQPGESQESLFKRTDEALYFAKRNGKNQI 614 >UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8X7_SULSY Length = 675 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 112/190 (58%), Gaps = 4/190 (2%) Query: 265 RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 +V ++ + N S +++ LR + E+++ D LT L NRRF +EI + R G Sbjct: 486 KVSYINDLINIFSPVLSNLRLI--EINKELSIRDPLTGLYNRRFALEFMNKEIEKSKRNG 543 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 PLS+++ID+D FK+IND GH+ GD IL+ S +R SD R+GG+EF+++L E Sbjct: 544 KPLSIVMIDLDDFKKINDIHGHSAGDNILKIFSDVLKKELRKSDISCRWGGEEFLLILPE 603 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALY 443 S+++TL ERIR + + + L+ S+G A + D + +I+IAD+ LY Sbjct: 604 TSKDKTLDVIERIRMTFQLNTMGIVSSRP-YLTASMGIASYPEDSDNIDEIIKIADDRLY 662 Query: 444 IAKRRGRNRV 453 +AKR G+NRV Sbjct: 663 VAKREGKNRV 672 >UniRef50_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFL0_9RHOB Length = 341 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 65/167 (38%), Positives = 99/167 (59%), Gaps = 1/167 (0%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 R + G D LT ++ RR ++ K EI A R L + + D+D+FK IND +GH GD+ Sbjct: 165 RIQAGSDQLTGVMARRHWVSMVKEEIQRAARNSNLLCIALFDIDRFKRINDAYGHAVGDQ 224 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 ++R V +R+ + R GG+EF I+ TE + ++ + AER R +E+ L A +G Sbjct: 225 VIRNVIATCKHELRAGSKLGRIGGEEFAILFTECALDQAVVAAERCRRAIERLTLTAPDG 284 Query: 412 EDIALSLSIG-AAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 EDI ++ S G A +F+ + LI++AD ALY AK GRNRVE+ + Sbjct: 285 EDIEITASFGVAPLFSYALSPDELIELADRALYQAKSGGRNRVEVGQ 331 >UniRef50_C6MBI8 Diguanylate cyclase with GAF sensor n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBI8_9PROT Length = 411 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 116/187 (62%), Gaps = 5/187 (2%) Query: 273 RNTVSQIITLLRELFEEVSRHE--VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 +N + Q + L ++L + E V D LT L NR + I ++I A R G ++++ Sbjct: 216 KNQLYQGVKLNKQLKAQKKSLEQRVTHDALTGLFNRPGIFDILHKQIQRAKRGGYGIAII 275 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENET 390 +ID+D FK INDT+GH TGD +L +++ + RS +Y+ RYGG+EF+ +++ +++ Sbjct: 276 MIDIDHFKAINDTYGHLTGDAVLCEIANRLTQSARSHEYIGRYGGEEFLAIISPYNQDGA 335 Query: 391 LRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRR 448 L+ AER R+ V ++K AN +++++S+G A+ D + L++ ADEALY AK + Sbjct: 336 LKAAERFRNAVACKEIK-ANETFVSVTISLGVAISAEAETLDEKWLLKKADEALYQAKHK 394 Query: 449 GRNRVEL 455 GRNRVEL Sbjct: 395 GRNRVEL 401 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 97/157 (61%), Gaps = 1/157 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR+L ++EI A R + +++ID+D FK ND +GH+ GDE+L+ V+ Sbjct: 1089 DALTGLFNRRYLEESLEQEIHRARRNHYSVGIVMIDIDHFKRFNDQFGHDAGDEVLKTVA 1148 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + ++RSSD RYGG+E ++L EAS ++T +E+IR +E +L N +++ Sbjct: 1149 RLLQGSIRSSDIACRYGGEELTLILPEASLSDTQARSEQIRYMIEHLQLHYENQSLGSIT 1208 Query: 418 LSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRV 453 S G A F H + E +++IAD ALY AK GRNRV Sbjct: 1209 ASFGVACFPEHGETLEAVLRIADTALYQAKALGRNRV 1245 >UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ19_ACIBL Length = 369 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 2/158 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L R + + EI A R TP+++L++D+D FK +NDT+GH+ GD++LR VS Sbjct: 198 DFLTGLKTRGYFEQQLELEIKRAERKRTPIAMLMLDLDHFKTLNDTYGHHVGDQVLRDVS 257 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA-L 416 ++R D RYGG+EF+IVL E + ++ A RIR VE+ K A + + L Sbjct: 258 AVLMKDLREVDTAARYGGEEFVIVLPETNTTGAMQVANRIRRGVEQAKFFAGSPRQVERL 317 Query: 417 SLSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRNRV 453 ++SIG A+++ +R LI+ AD ALY AK +GRN+V Sbjct: 318 TISIGIAIYDQDAQSKRELIEAADAALYQAKGQGRNQV 355 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 8/159 (5%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT+L NRR + + +RE + R PLSV+I+D+D FK++ND GH TGD++L+K+ Sbjct: 228 DSLTQLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHFKQVNDQHGHQTGDQVLKKIG 287 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL---KAANGEDI 414 N+R++D FRYGG+EF+IVL + E + AE++R +E+TK ++AN Sbjct: 288 IILQHNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKLRIIIEETKFWRQQSAN---- 343 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 L+ S G + +I+ ADEALY AK GRN V Sbjct: 344 -LTASFGLSELWAEDKVPSMIKRADEALYYAKENGRNTV 381 >UniRef50_B7RWX6 GGDEF domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWX6_9GAMM Length = 390 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/156 (42%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT+LLNRR L + IAHA R G P S ++ID+D FK +ND++GH TGD +++ V+ Sbjct: 219 DPLTRLLNRRGLQDALRISIAHARRHGLPTSAIMIDIDYFKRVNDSFGHETGDHVIQLVA 278 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 R SD V R GG+EF+I+L AER+R V + L + I ++ Sbjct: 279 SMIERLCRESDVVARTGGEEFLIILANTDSASARILAERVRQAVGERPL-VVDQHRIPVT 337 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +S+G A +G + + L Q AD+A+Y+AKR GRNRV Sbjct: 338 ISLGVASASGEFNLDELSQEADQAMYLAKRGGRNRV 373 >UniRef50_Q30UV1 Diguanylate cyclase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30UV1_DESDG Length = 436 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 2/175 (1%) Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 +++ E ++ E D LT L NRR L T +A +R PL +L++D+D+FK + Sbjct: 246 SMINERLVQMLEKEARTDPLTGLGNRRALYTAAAHHVARLHRLCEPLVILVMDLDRFKSV 305 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 ND +GH GD +LR + R +D +FR+GG+EF+ +L + E + AER+R Sbjct: 306 NDKFGHPAGDALLRHFAAILQKQFRGTDQLFRFGGEEFVALLQPSDERGAVCLAERLRRE 365 Query: 401 VEKTKLKAANGEDIALSLSIGAA-MFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 V L+ G IA+++SIG A M PD R + AD+ALY AK GRNRVE Sbjct: 366 VAACPLQ-LGGASIAVTVSIGIANMLPEEPDITRALGRADQALYKAKAGGRNRVE 419 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 12/186 (6%) Query: 283 LRELFEEVSRHEVGM------DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 LR+ EE+ + +V + D LT NRR+L +RE++ + R G PLS+LI+D+D Sbjct: 537 LRKQLEEIEKLQVALREQAIRDSLTGCFNRRYLDETLERELSRSRREGYPLSLLILDLDH 596 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK INDT+GH GD+ L +++ +R D + RYGG+EF+I++ AE Sbjct: 597 FKRINDTYGHMAGDQALIVLAETLRAGIRHEDVLCRYGGEEFVILMPRMPLAIAAERAEL 656 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNGH---PDYERLIQIADEALYIAKRRGRNRV 453 RS++ + ++ N E ++ + S G A + H PD L Q AD+ALY AK GRNRV Sbjct: 657 WRSKIAEIRVTFGNFE-LSFTASAGVAAYPDHGKMPD--ELTQAADQALYTAKNEGRNRV 713 Query: 454 ELWKAS 459 ++ A+ Sbjct: 714 VVYSAN 719 >UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ARY2_PELPD Length = 355 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 109/194 (56%), Gaps = 16/194 (8%) Query: 273 RNTVSQIITLLRELFEEVS---------RHEVGM-DVLTKLLNRRFLPTIFKREIAHANR 322 +N +SQI+ L F +S H++ + D LT L NRR+ + +E A+R Sbjct: 157 KNRISQILVLAS--FAAISIENAKFHEETHQLAINDSLTGLNNRRYFDKVLPQEYERAHR 214 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 G P S+++IDVD FK NDT GH+ GD IL + + +RS D+ FRYGG+EF+++L Sbjct: 215 EGLPFSLMMIDVDNFKLFNDTHGHHLGDRILATIGRVLRKTLRSIDFAFRYGGEEFVVIL 274 Query: 383 TEASENETLRTAERIRSRV--EKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIAD 439 E + AERIR RV E KL N +D +++S+G + + L+ +AD Sbjct: 275 PETDLESAHKVAERIRQRVMAESRKL-LRNPQDRPVTVSVGISCYPRDAACSITLLAMAD 333 Query: 440 EALYIAKRRGRNRV 453 + LY AKR GRNRV Sbjct: 334 QLLYQAKRTGRNRV 347 >UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPL1_PSEMY Length = 557 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/168 (41%), Positives = 96/168 (57%), Gaps = 2/168 (1%) Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 E R + D LT L NRR+L F RE+A A R PL++ +ID+D FK +ND GH Sbjct: 377 LHEQLREQALCDPLTGLYNRRYLDEFFSRELARAQRENLPLALALIDLDHFKRLNDECGH 436 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 GD++L+ V++ DN+RS+D VFR GG+EF+++L E + I S++ + Sbjct: 437 LVGDDVLKAVAKHLLDNLRSTDAVFRIGGEEFLLILPGVDPVEACERLQNICSQLAGQSI 496 Query: 407 KAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRV 453 A G D ++LS G A + E L+ AD ALY AKR GRNRV Sbjct: 497 -ATRGGDQQVTLSAGLAHWPQQGVVLEELLHAADAALYQAKRGGRNRV 543 >UniRef50_C5T761 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T761_ACIDE Length = 398 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 108/185 (58%), Gaps = 7/185 (3%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 I + RE + + + +D LT + NRR L +R +A A R P+++L++D+D+FK Sbjct: 207 ILMGRERADAEHQQQALLDPLTGVPNRRALMAELERTLAQAVRERRPVALLMMDIDRFKR 266 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 +NDT+GH GD +L V+Q +R D++ RYGG+EF+ +L AE +R+ Sbjct: 267 VNDTYGHVAGDAVLAAVAQCLKGGLRGQDFIGRYGGEEFLALLPGTDAAGAGVVAEHLRA 326 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPD----YERLIQIADEALYIAKRRGRNRVEL 455 RVE+ + EDI +++SIGA PD + ++ +AD+A+Y AKR GRNRVE Sbjct: 327 RVERLTMP-WEPEDIRVTVSIGA--HTRVPDEGTGAQAMVDVADQAMYAAKRAGRNRVER 383 Query: 456 WKASL 460 A+L Sbjct: 384 LDAAL 388 >UniRef50_Q1GSG4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sphingopyxis alaskensis RepID=Q1GSG4_SPHAL Length = 594 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/157 (42%), Positives = 94/157 (59%), Gaps = 4/157 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D+LT L NRR T + +A A G PL+V I D+D FK INDT GH TGD+++++V+ Sbjct: 437 DMLTGLPNRRHTLTFLEEAMAGARAHGAPLAVAIFDIDHFKRINDTHGHATGDQVIQRVA 496 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI-AL 416 Q +R D + R GG+EF+ +L AS AER+R VE G+ + Sbjct: 497 QRARSVLRDEDMIGRIGGEEFVCILQRASALSGEIVAERVRKAVEN---GVGQGDGLPPT 553 Query: 417 SLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 ++SIG A+++G D E L+ AD+ALY AKR GRNR+ Sbjct: 554 TVSIGLAVYDGEQDIEELLHRADQALYAAKREGRNRM 590 >UniRef50_B0UQC5 Diguanylate cyclase n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UQC5_METS4 Length = 348 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 5/188 (2%) Query: 271 QIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT-PLSV 329 ++R +I L R L R E +D LT + NRR +R++A A G P + Sbjct: 162 ELRQAGERIGKLQRNLAS--VRQEASVDALTGIANRRAFTARLRRQLAQAKAEGAGPFCL 219 Query: 330 LIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENE 389 +++DVD FK ND GH TGD++LR V++ DNV+ D+V RYGG+EF ++L++ Sbjct: 220 VLLDVDHFKLFNDAHGHRTGDQVLRLVARLLTDNVKGRDFVARYGGEEFALILSDVDAES 279 Query: 390 TLRTAERIRSRVEKTKL-KAANGEDI-ALSLSIGAAMFNGHPDYERLIQIADEALYIAKR 447 L AE+I R+ +L K G DI AL+LS G A LI+ AD ALY AK Sbjct: 280 GLTVAEQICERLRGKRLIKRETGRDIGALTLSGGLAQARPGEAQGALIERADAALYAAKG 339 Query: 448 RGRNRVEL 455 +GR+R+ L Sbjct: 340 QGRDRICL 347 >UniRef50_B8GME9 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GME9_THISH Length = 306 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 1/198 (0%) Query: 257 RNLNNRSLRVKFLLQIRNTVSQIITLLR-ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKR 315 R L R R + L ++ N +S +I LR L + D LT L NR L + R Sbjct: 104 RFLRGRKFREEELTEVENLLSVLIYPLRNSLLYRQAVEAAQTDTLTGLYNRAALDHLLPR 163 Query: 316 EIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGG 375 E+A R L++L++D+D FK INDT GH+ GD++L+ + + R SD +FRYGG Sbjct: 164 ELAALRRGQQHLALLVVDIDHFKRINDTLGHSAGDQVLKAAADCLQEATRESDMLFRYGG 223 Query: 376 DEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLI 435 +EF+++++ S + L ERIR + + + L+ SIG AM L Sbjct: 224 EEFVMLMSTESPEDALLAGERIRRVLRNCEALQSAAPGFTLTASIGVAMARPTDSAFSLF 283 Query: 436 QIADEALYIAKRRGRNRV 453 AD+A+Y AK+ GR+RV Sbjct: 284 DRADQAMYTAKQAGRDRV 301 >UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria RepID=A0KRY2_SHESA Length = 581 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 13/270 (4%) Query: 194 IDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGI---FN 250 +DII + S L + + L+ + K RH + +GH L F G+ F Sbjct: 302 VDIIGALRYSSSLAALMMLTTLSVTISLVIK-RHPIAKYFLLGHC--LFVGFSGLAVMFY 358 Query: 251 QTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVS------RHEVGMDVLTKLL 304 + L++ + V +L+ ++ II L EE+ +++ D LT L Sbjct: 359 KGRAEFSYLSSHGVGVGIMLEAL-VLALIIAYRIRLLEEIKASQEELKYQAATDSLTHLF 417 Query: 305 NRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV 364 NRR +R A+ T P++V+I D+D FK +ND +GH GD+++ ++ + Sbjct: 418 NRRHFHKEAQRIYMQASVTQQPMAVIICDIDLFKRVNDKYGHLMGDQVIIDIATTLKQHA 477 Query: 365 RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAM 424 R D V RYGG+EFI++L + S E + AERIRS V + A E ++LS+G A Sbjct: 478 RKCDIVARYGGEEFIMLLHDVSLTEAHQCAERIRSAVAELSFMAETQEAFTVTLSLGVAA 537 Query: 425 FNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + E I++AD+ALY AK +GRN V+ Sbjct: 538 VDFVHPLEHAIKLADDALYRAKHQGRNNVQ 567 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 1/157 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR + E+ R GTPL+++ IDVD+FK +NDTWGH GDE+LR ++ Sbjct: 553 DGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRVNDTWGHAVGDEVLRALA 612 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 VR D V R GG+EF ++L + + E + AER+R+ VE L G + ++ Sbjct: 613 GICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEAAPLLTTAGP-LTVT 671 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 LS+G + + L++ AD ALY AK GRNRVE Sbjct: 672 LSLGVSASPPCDGADTLLREADRALYRAKAGGRNRVE 708 >UniRef50_Q1QVZ7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVZ7_CHRSD Length = 574 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 4/179 (2%) Query: 283 LRELFEEVSRHE--VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 LR + ++++ E + D LT LLNR + A R G P ++LI D+D FK+I Sbjct: 389 LRTVTRKLAKAEEMISQDALTGLLNRFGFKQAIDEFMVEAER-GVPFALLIADIDHFKDI 447 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 NDT+GH GDE L+ V+ + +R D V RYGG+EF +++T E+ + AERIR Sbjct: 448 NDTYGHQLGDEALKIVASRLAEQLRDGDAVARYGGEEFCMLMT-VPEDRVVEVAERIRRT 506 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 V T + +G+++AL++SIGA D + + + ADEALY AK GRNR + A+ Sbjct: 507 VAATPVTLDDGKELALTISIGATYHTPGLDEDSMFERADEALYEAKEYGRNRTVMLNAA 565 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/157 (43%), Positives = 94/157 (59%), Gaps = 2/157 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRR + E A A R G PLSVL++D D FK INDTWGH GD +LR ++ Sbjct: 514 DELTGVANRRHFMARLEDEAARAQRYGRPLSVLLLDADHFKSINDTWGHEAGDMVLRHIT 573 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 ++R +D + R GG+EF ++L E ++ LRTAERIR+ VE + A + + Sbjct: 574 DVMGLSLRENDLIGRLGGEEFGVLLPETAQERALRTAERIRAAVEDAPV-AVRDVWVGCT 632 Query: 418 LSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRV 453 +S+GAA + G D + LI+ AD L AK GRNRV Sbjct: 633 VSVGAAEYRGANDSLDDLIRRADHMLMRAKEEGRNRV 669 >UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Ralstonia pickettii RepID=B2UI26_RALPJ Length = 348 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 6/176 (3%) Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 ++L EL +++RHE D + + NRR + RE HA R G PLS+L++DVD FK + Sbjct: 169 SILTEL--QIARHESLTDPMLGIWNRRAAMELLTRECGHAMRYGQPLSLLVVDVDHFKRV 226 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 NDT+GH GD +L ++++ N R D V RYGG+EF++VL + + + AER+RS Sbjct: 227 NDTYGHPVGDAVLVEIARTLRVNSRPIDAVGRYGGEEFLVVLPDTTTLQASDIAERLRSA 286 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHPDY---ERLIQIADEALYIAKRRGRNRV 453 VE ++ A +I S+S+G A + LI AD AL AKR GRNRV Sbjct: 287 VESLEI-ATPEANIRSSISVGLASCEPEKNLCTPTDLIMRADAALLAAKRLGRNRV 341 >UniRef50_C3K054 Putative GGDEF/GAF domain sensory box protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K054_PSEFS Length = 315 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/252 (34%), Positives = 125/252 (49%), Gaps = 35/252 (13%) Query: 215 ADFGLWFNHKGRHY--FSGIAEVGHISRLIQDFDGIF--NQTMRNTRNLNNRSLRVKFLL 270 +D L F H+G H +S E H+ LI F NQ + SL L Sbjct: 86 SDLRLEFGHRGHHSVSYSLSHEGEHLGELI------FRRNQRLSEEELGQLESLLAPLLY 139 Query: 271 QIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 +RN + L+ +R + D LT+ NR + +REI A R PLS+L Sbjct: 140 PMRNAL---------LYRAATRSAL-RDPLTETGNRIAMDQTLQREIDMARRHLNPLSLL 189 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENET 390 +ID+D FK INDT GH GD +LR V+ A +R+ D VFR+GG+EF+I+L+ + Sbjct: 190 MIDIDHFKRINDTHGHAAGDNVLRAVAAAIKGQLRNVDMVFRFGGEEFLILLSNTGRDAA 249 Query: 391 LRTAERIRSRVEKTKLKAANGED-------IALSLSIGAAMFNGHPDYERLIQIADEALY 443 ER+R +AA +D I L++S+G + E L++ AD ALY Sbjct: 250 AMVGERLR--------QAAQAQDYWADDTRIELTVSLGCSTLLAAESAESLLRRADTALY 301 Query: 444 IAKRRGRNRVEL 455 +AKR GRNR+ + Sbjct: 302 VAKREGRNRLAM 313 >UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y21_COLP3 Length = 722 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 96/158 (60%), Gaps = 3/158 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT +NR + +EIA+ N G+PLS++++D+D FK +ND +GH GDE+L Sbjct: 561 DALTGAVNRHHFNEVLDQEIANVNNHGSPLSIMLLDIDHFKSVNDRYGHGVGDEVLVMFY 620 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q + VRSSD V R GG+EF+I++ + AER+R ++ K +L AN + I+++ Sbjct: 621 QTCVEAVRSSDVVARIGGEEFVIIMPNTQLVNAQKFAERLRQKIAKLELNIANNQ-ISVT 679 Query: 418 LSIGAAMFNGH--PDYERLIQIADEALYIAKRRGRNRV 453 +SIG + + + E + AD++LY AK GRN+V Sbjct: 680 VSIGVSQWQSEYFTNAETFVAHADKSLYQAKNSGRNKV 717 >UniRef50_B9M9A9 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M9A9_GEOSF Length = 400 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 142/283 (50%), Gaps = 41/283 (14%) Query: 187 ASILSWEIDIIYKILLDSDLGSSLPL--SQADFGLWFNHKGRHYFSGIAEVGHISRLI-Q 243 A++LSW I ++Y++L+ LP+ + F + FN +G++ I R + Q Sbjct: 138 ATVLSWTIFLLYEVLVIWTKSIPLPILTNNTFFFIAFN------ITGMSASYSIERYMRQ 191 Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE-EVSRHE----VGMD 298 DF LQ R Q L + L + E SRHE +D Sbjct: 192 DF------------------------LQRRKIREQTENLKKALLDVEKSRHEAEEMAKLD 227 Query: 299 VLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQ 358 LT L NRR +I +RE+A R LS+++ID+D FK +NDT+GH GD++L+ ++ Sbjct: 228 PLTSLYNRRHFFSIAERELARYRRYRHSLSIIMIDLDHFKRVNDTYGHFIGDQVLQALAA 287 Query: 359 AFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSL 418 A +R +D RYGG+EF I++ E RI+ +E T++ G I ++L Sbjct: 288 AIDKLMRKADTPCRYGGEEFAILMPETDLAAAQNLGRRIKDAIESTEIDTRKGP-IKVTL 346 Query: 419 SIGAAMFNGHPD--YERLIQIADEALYIAKRRGRNRVELWKAS 459 S+G A +G D E+L++ AD ALY AK GR+ + +W S Sbjct: 347 SMGIASLDGAEDACIEQLVERADHALYQAKYSGRSLIRIWDKS 389 >UniRef50_A6F347 GGDEF domain-like protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F347_9ALTE Length = 524 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/159 (43%), Positives = 94/159 (59%), Gaps = 1/159 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT +LNRR + I + EIA A R L++L ID D FK IND GH GD +L+ S Sbjct: 356 DSLTGVLNRREMTRILEEEIARAKRYDRELALLWIDFDHFKAINDDHGHAAGDSVLKAAS 415 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 ++VRS D V R+GG+EF+I+L E E L TAER+R V T +G + ++ Sbjct: 416 GLLAESVRSVDSVGRFGGEEFVILLPEMDRREALETAERLRRLVCDTPQPLGHGNTVTMT 475 Query: 418 LSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVEL 455 +SIG ++F H + + L AD A+Y AK GRN+V L Sbjct: 476 ISIGVSVFPDHGEGADALCAAADRAMYQAKADGRNQVVL 514 >UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLU7_9GAMM Length = 477 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 1/158 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT LLNRR + R G PLS+L++D+D FKEIND +GHN GD +L+ +S Sbjct: 320 DPLTSLLNRRAFIDRYAAIRNQHQRNGQPLSLLLVDIDHFKEINDRYGHNAGDLVLKGIS 379 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + + VR SD V R+GGDEF+++L+ + AERIR+R+ AA E L+ Sbjct: 380 EILTEAVRPSDLVTRWGGDEFLLLLSGTDSDNARDIAERIRTRISLEPDLAAISEQ-RLT 438 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 +SIG A D +R +Q AD LY AK+ GR+R EL Sbjct: 439 VSIGVAEQRDDFDLDRHVQEADSGLYRAKKAGRDRAEL 476 >UniRef50_A6Q482 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q482_NITSB Length = 458 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 8/197 (4%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEVGM------DVLTKLLNRRFLPTIFKREIAH 319 +K L ++ S ++T RE F + + E + D LTKL NR +L + E Sbjct: 261 IKILESLQKLFSIMLTKERE-FYRIKKEEAHLFQKAITDGLTKLYNRYYLDKFIESEFEK 319 Query: 320 ANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFI 379 A R PLSV++ID+D FK IND++GH GD +L+ ++ NVR SD VFRYGGDE + Sbjct: 320 AKRYNYPLSVVMIDLDFFKRINDSYGHEVGDMVLKAFAEFLKKNVRKSDVVFRYGGDELL 379 Query: 380 IVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIA 438 IV+ ++ ERIR+ + + I + S G A + + D + LI+ A Sbjct: 380 IVMPFTDLHQARDVMERIRNLLHQKGTLQFGDIKITYTFSAGIATIDENIKDAKELIKKA 439 Query: 439 DEALYIAKRRGRNRVEL 455 DEALY AK+ GR+R+EL Sbjct: 440 DEALYKAKKLGRDRIEL 456 >UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JI7_THICR Length = 420 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 116/197 (58%), Gaps = 11/197 (5%) Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGM-DVLTKLLNRRFLPTIFKREIAH 319 NR +++ + VS+ + + +EL +++ M D LT + NRR L + E+ Sbjct: 234 NRDGDIEYFVSTGKDVSEQVKMQQEL------NDLAMKDALTGIWNRRHLTDVVNTEMKR 287 Query: 320 ANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFI 379 NR G +++ DVD FK+IND +GH+ GDE L ++++ VR +DY+ R+GG+EF+ Sbjct: 288 VNRYGGRFGMIMFDVDYFKQINDDFGHDIGDETLVQIAKIVQKIVRETDYIGRWGGEEFL 347 Query: 380 IVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIAD 439 ++ E + T + AE+IR +E+ +++S+GA +++ + +L + AD Sbjct: 348 LIALELDASLTAKLAEKIREAIEEFVFPKVG----QVTVSLGATVYHKNETEAQLFKRAD 403 Query: 440 EALYIAKRRGRNRVELW 456 EALY+AKR GRNRVE++ Sbjct: 404 EALYLAKRHGRNRVEVY 420 >UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WV4_DESDG Length = 398 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 101/198 (51%), Gaps = 21/198 (10%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 +T R + EE+S H D LT L NRRF + E+ +G PLS+L++D+D FK Sbjct: 191 VTAHRRMLEELS-HMARTDPLTGLNNRRFFMEAARAEVERMQSSGRPLSLLMLDIDHFKR 249 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 +NDTWGH+ GD +L+++S + +R D R GG+EF ++L E E R AE +R Sbjct: 250 VNDTWGHDAGDMVLKQLSCCLAETMRGQDVCARLGGEEFAVLLPETGHAEACRAAETLRQ 309 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGH--------PD-----------YERLIQIADE 440 V A +G + SL + GH P E L++ AD Sbjct: 310 AVAGMAF-AGHGFSVTSSLGLTTLDSAGHAVSGQRPVPGGVAVSACCGQVVEILLKRADI 368 Query: 441 ALYIAKRRGRNRVELWKA 458 ALY AK+ GRNR E++ A Sbjct: 369 ALYAAKKNGRNRTEVYPA 386 >UniRef50_Q9A5I5 Diguanylate cyclase n=76 Tax=Alphaproteobacteria RepID=PLED_CAUCR Length = 454 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 97/158 (61%), Gaps = 2/158 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR++ + A G P+S L+ID+D FK+INDT+GH+ GDE+LR+ + Sbjct: 292 DQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFA 351 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG-EDIAL 416 NVR+ D RYGG+EF++++ + + + LR AERIR V + A+G E + + Sbjct: 352 LRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNV 411 Query: 417 SLSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRV 453 ++SIG + G D E L++ ADE +Y AK GRN V Sbjct: 412 TISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAV 449 >UniRef50_Q47MR9 GGDEF n=2 Tax=Streptosporangineae RepID=Q47MR9_THEFY Length = 448 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/163 (42%), Positives = 97/163 (59%), Gaps = 2/163 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D T LLN + K E+ A RTG PL+VLIID+D FK++NDT GH GD++L V+ Sbjct: 268 DPKTGLLNAVAWERVAKTELTRALRTGCPLAVLIIDIDHFKKVNDTHGHLVGDQVLLNVA 327 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +R D + R+GG+EF+++L A E RTAER+R++V + + N I ++ Sbjct: 328 TMLSQQLRPYDVIGRFGGEEFVVLLPGADMAEACRTAERLRTQVGRMA-QPINDITITVT 386 Query: 418 LSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKAS 459 +SIG A+ H D L+ AD ALY AK GR+RV L A+ Sbjct: 387 VSIGVALLRVHGRDLLELMAAADLALYRAKDSGRDRVCLPVAT 429 >UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1G5_PELTS Length = 343 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 133/261 (50%), Gaps = 46/261 (17%) Query: 212 LSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQ 271 +++ D+G+ FN + +AE N N SL++K + Sbjct: 102 IARGDYGITFNLRSNLEIEALAE-----------------------NFNKMSLKLK---E 135 Query: 272 IRNTVSQIITLLRELFEEVS--RHEVG-----------MDVLTKLLNRRFLPTIFKREIA 318 R + + + LL E E+S + E+ D LT NRR++ + ++E+A Sbjct: 136 ERENLFRQVALLEEQKREISVQKEELARVNSRLELLSITDPLTGAYNRRYIISQLEQELA 195 Query: 319 HANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEF 378 A R G PLS+++ID+D FK++NDT GH GDE+L+ V + +R++D + RYGG+EF Sbjct: 196 VAARHGLPLSLIMIDIDHFKKVNDTHGHQVGDEVLKDVVKVLSGCIRTADVLGRYGGEEF 255 Query: 379 IIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY------E 432 +++ E L AER+R V + + G + L++S+G FNG ++ + Sbjct: 256 VVIAPFTGFQEALVLAERLRDTVSRWPFETTYG-FLKLTISLGVTTFNGKEEHYHNSLID 314 Query: 433 RLIQIADEALYIAKRRGRNRV 453 RL+ ADE +Y AK +GRN V Sbjct: 315 RLLARADEEMYKAKAQGRNLV 335 >UniRef50_B4SM08 Diguanylate cyclase n=13 Tax=Xanthomonadaceae RepID=B4SM08_STRM5 Length = 512 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 4/219 (1%) Query: 239 SRLIQDFDGIFNQTMRNTRNLNNRSLRVK-FLLQIRNTVSQIITLLRELFEEV--SRHEV 295 +R I D + + + MR+T + ++ + + L R V + + EL +E+ + Sbjct: 293 ARSIADLNQLLQEVMRDTGKVQQQAAQARDHLASARQEVERAEQRIAELEQELRAAGDLA 352 Query: 296 GMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRK 355 +D LT+ LNRR L + +RE+A A R +PL V +ID+D F + ND GH GD +L+ Sbjct: 353 RIDPLTQALNRRGLDELLQRELARAARNNSPLGVAMIDLDDFHQTNDAHGHAGGDALLQH 412 Query: 356 VSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA 415 + +R++D + R GGDEF++VL E +++ T +R++ R +L + + Sbjct: 413 LVAVCKLLLRATDGIARLGGDEFVLVLPETQGADSMATVQRLQ-RSLAHRLLTVQDQRVP 471 Query: 416 LSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + S G A + D E L++ AD+ALY AKR+G+NRV+ Sbjct: 472 VHFSAGLAQWQPGDDTEALLRRADDALYAAKRQGKNRVQ 510 >UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJI0_9BACT Length = 750 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 100/166 (60%), Gaps = 4/166 (2%) Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 +RH D LT L N + RE A R+G PLSV+++DVD+FK NDT GH TG+ Sbjct: 556 ARHRAITDGLTGLFNHAYFLEKLTREAELAGRSGRPLSVIMLDVDRFKHFNDTNGHETGN 615 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL---K 407 E+L+ +++ R SD + RYGG+EF+++L +++ AER+R RV + + Sbjct: 616 ELLKDLARLMERCFRRSDLLARYGGEEFVVLLPNTPKSQAAVLAERLRRRVAEYPFVGRE 675 Query: 408 AANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 + G + +SL + AAM D ++L+++AD ALY AK+ GRNRV Sbjct: 676 SQPGGCLTVSLGV-AAMPTDTSDPKQLLELADRALYRAKQNGRNRV 720 >UniRef50_B5EHL1 Diguanylate cyclase n=7 Tax=Geobacter RepID=B5EHL1_GEOBB Length = 356 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 2/158 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L N R+ F++E+ A R P S++++DVD FK ND++GH TGD +L + Sbjct: 188 DSLTGLHNHRYFKQYFRQEMGRAKRYHKPFSIIMMDVDDFKSYNDSYGHATGDRLLALMG 247 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK-TKLKAANGEDIAL 416 + + +R D FRYGG+EFI++L E + ++ + AER+R V+ T + +G + Sbjct: 248 EIILETIRGVDVAFRYGGEEFIVLLPETTLDKAILAAERLRESVQAGTASRPVDGSGRGV 307 Query: 417 SLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRV 453 ++SIG A + + D + L I D LY+AKR G+N+V Sbjct: 308 TVSIGVASYPDNADKMDELFNIVDSLLYLAKRCGKNKV 345 >UniRef50_C6XL77 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alphaproteobacteria RepID=C6XL77_HIRBI Length = 459 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 66/161 (40%), Positives = 95/161 (59%), Gaps = 8/161 (4%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR++ ++ + AN G P+S+L+ D+D FK++ND GH+ GDE+LR+ S Sbjct: 295 DQLTGLHNRRYMENQLEQFMKRANMGGGPVSILLCDLDHFKKVNDGHGHDVGDEVLRQFS 354 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG---EDI 414 N+R SD RYGG+EF++++ + + TAERIR +V+ NG D+ Sbjct: 355 DRLMHNIRPSDIACRYGGEEFMVIMPDTTIQMAQLTAERIREKVDGAPFSINNGLGRLDV 414 Query: 415 ALSLSIGAAMFNGHPD--YERLIQIADEALYIAKRRGRNRV 453 +S G A PD +LI+ ADEALY AK GRNR+ Sbjct: 415 TMS---GGASVTFPPDDSVAQLIKRADEALYNAKENGRNRI 452 >UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTU0_9FIRM Length = 491 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/239 (34%), Positives = 124/239 (51%), Gaps = 14/239 (5%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 KG H G++EV + + G+ + + L + L + +R+ SQI + Sbjct: 256 KGTH--DGVSEVAVPLIVNNEIIGVLDVETNQAKRLQDYDLDL-----LRSLASQISMTI 308 Query: 284 RELFEEVSRHEVG--MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 VSR E+ D LT L N R+ T+F+RE A R PLS+L+ID+D FK N Sbjct: 309 AHA-NHVSRVELQAITDGLTGLYNYRYFQTLFEREFKRAVRYKRPLSLLMIDIDYFKLYN 367 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 DT+GH GD I+R +++ N R D V RYGG+EF ++ E + +E + AERIR V Sbjct: 368 DTYGHRQGDHIIRTIAKIIRQNCRDVDIVVRYGGEEFAVLFPETTVDEAFKIAERIRMAV 427 Query: 402 EKTKLK---AANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 + + G + +S+ + ++ + E LI AD ALY AKR +NRV L++ Sbjct: 428 AEYPFANKHSQPGGILTVSMGVAGYPYDAQSETE-LIDHADMALYRAKRTSKNRVCLYR 485 >UniRef50_B7IH39 Diguanylate cyclase n=2 Tax=Bacteria RepID=B7IH39_THEAB Length = 167 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 4/157 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NR + ++ + R G P S+L++D+DKFK+INDT+GH GDE+L+K++ Sbjct: 14 DQLTDLYNRHKMNEEIRKHYYNFKRYGRPFSLLMVDIDKFKKINDTYGHMVGDEVLKKLA 73 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + N+R +D R+ G+EF+I+L+E + + AE+IR +EK +DI ++ Sbjct: 74 KILVKNIRKTDIASRWVGEEFLILLSETDLEQAIEVAEKIRKTIEKESF----PKDIRIT 129 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +SIG H + L+ + DE LY AK GRNRVE Sbjct: 130 VSIGVDSVENHEHIKDLLILVDEKLYKAKESGRNRVE 166 >UniRef50_A7GXF8 3-deoxy-d-manno-octulosonic-acid transferase n=8 Tax=Campylobacterales RepID=A7GXF8_CAMC5 Length = 422 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 5/162 (3%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRR+ + +A A T P ++ +ID+D FK INDT+GH++GD++L+ ++ Sbjct: 264 DFLTSVYNRRYFYDDMTQYLAKAEETAEPYAIAMIDIDHFKNINDTYGHDSGDKVLQFLA 323 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + D+ + +D V R+GG+EF +VL S+ E ++ +R+++ +K+ I + Sbjct: 324 KKLVDDTKGNDIVARFGGEEFCVVLKNISQEEAVKFFVNLRAKIANSKISLKKNV-INFT 382 Query: 418 LSIGAAMFNGHPDY--ERLIQIADEALYIAKRRGRNRVELWK 457 +SIG +FN DY + L+++ADEALYIAK GRNRVE+ K Sbjct: 383 VSIG-VVFN-RSDYRLDELLELADEALYIAKESGRNRVEVAK 422 >UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM04_9GAMM Length = 291 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 17/196 (8%) Query: 276 VSQIITLLRELFEEVSR-----HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 V ++ L E + R HE D LT L NRR + E+A + R G PLSV+ Sbjct: 84 VCSVVLLTYSSVESIRRITRLEHESITDPLTGLFNRRHMDRRLDEEVARSRRYGQPLSVV 143 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENET 390 ++D+D+FK IND GH GD IL ++Q N+R D R+GG+EF+++ ++ Sbjct: 144 MLDIDEFKGINDRLGHLAGDYILESIAQRLRQNLRRVDLAARFGGEEFVVIAPHTDQDAA 203 Query: 391 LRTAERIRSRVEKTKL--------KAANGEDIALSLSIGAAMFNGHPD----YERLIQIA 438 L+ AE++RS + +T + +++ +++S+G A N PD + L+Q A Sbjct: 204 LQLAEKLRSEIAQTPIILKGHEHVPPCAPDELYVTVSVGVASLNIEPDSRDNADFLLQRA 263 Query: 439 DEALYIAKRRGRNRVE 454 D+ALY AK GRNR E Sbjct: 264 DDALYRAKAGGRNRCE 279 >UniRef50_Q083J4 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Gammaproteobacteria RepID=Q083J4_SHEFN Length = 294 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 5/187 (2%) Query: 271 QIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 Q R ++ IT R+L E+ + G D LT+L NR L + + A R G+ LS+L Sbjct: 105 QFRIAIAHDITE-RKLMEQQLHYIAGHDPLTELPNRALLFGRLQTSLGLARREGSHLSLL 163 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA-SENE 389 ID+D FK +ND++GH GD++L+ ++Q D VR SD V R+GGDEF++VL S + Sbjct: 164 FIDIDGFKHVNDSYGHLVGDKLLKNIAQRLRDCVRKSDTVGRFGGDEFVVVLNGIDSFDN 223 Query: 390 TLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAKRR 448 L E IR+++EKT + ++ LS SIG A + + D E +L+Q AD+A+Y AK Sbjct: 224 VLVITENIRAQLEKT--YQFDDLNLQLSPSIGVARYPDNGDDEQQLLQYADQAMYRAKNA 281 Query: 449 GRNRVEL 455 G NRV++ Sbjct: 282 GGNRVDV 288 >UniRef50_Q2W491 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2W491_MAGSA Length = 386 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 7/173 (4%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 +L E+ SR D LT LNRR ++ +REI A RT +PLS+L+ID+D FK+IND Sbjct: 216 DLNEQASR-----DPLTGALNRRAFASLGEREIVRARRTASPLSLLMIDMDHFKQINDCL 270 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS--RVE 402 GH GDE+L + +R+ D R+GG+EF+ +L +S E + AER+R+ E Sbjct: 271 GHGGGDEVLVLFATLAGRILRAEDLFCRFGGEEFLALLPSSSLMEAMGVAERLRAAFSAE 330 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 L + ++LS+G A D E I+ AD ALY AK GRNR EL Sbjct: 331 GAGLDSEGKLPFPMTLSVGIAALAADEDMEAAIRRADAALYRAKDLGRNRCEL 383 >UniRef50_C7RS34 Diguanylate cyclase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS34_9PROT Length = 447 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 110/191 (57%), Gaps = 8/191 (4%) Query: 269 LLQIRNTVSQIITLLRELFEE--VSRHEV----GMDVLTKLLNRRFLPTIFKREIAHANR 322 +L+IR V + I LRE+ +E +R ++ D LT + NRR + + EI A R Sbjct: 229 MLEIR-AVERAIGQLREVMQENETTREQLERLATTDGLTGMFNRRHFLAVAEEEIKRAQR 287 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 P+ V + D+D FK IND+ GH +GD +L+ V++ F +R SD+ R+GG+EF V Sbjct: 288 YSRPICVGMADLDFFKHINDSHGHASGDLVLQSVAEIFARTLRHSDWGCRFGGEEFAFVF 347 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 E E R AER+R +++ A+G + ++LS+G A + P E +Q AD AL Sbjct: 348 PETGLREAHRLAERLRQSAAASQIALADGSRVDITLSLGLADASSCP-LEIALQRADAAL 406 Query: 443 YIAKRRGRNRV 453 Y AK++GRNRV Sbjct: 407 YDAKQQGRNRV 417 >UniRef50_B6BKL4 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKL4_9PROT Length = 617 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 92/157 (58%), Gaps = 1/157 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D +T L NRRFL + + + A R+ SVL++DVD FK +NDT+GH+ GD ++ ++ Sbjct: 447 DGMTGLYNRRFLEEVIDKIMHQATRSKETYSVLMLDVDFFKMVNDTYGHDVGDRVIVEIG 506 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + DN+R +D RYGG+EF+++L AS+ T A +I S GE + + Sbjct: 507 KVLKDNIRDADLAIRYGGEEFVVMLHNASDEGTQEVASKIHSAFAALSFDVGTGEMMKKT 566 Query: 418 LSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRNRV 453 +SIG + F D + I+ AD ALY+AK GRN++ Sbjct: 567 MSIGISKFPKDGDTIWKCIKFADTALYVAKTTGRNKI 603 >UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n=3 Tax=Zymomonas mobilis RepID=Q5NP17_ZYMMO Length = 1008 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 1/157 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT LLNRR +F++ A ++T SV I+D+D FK+IND GH GD +++ ++ Sbjct: 852 DELTGLLNRRAFTEMFEKNCAQFSKTKDQFSVFILDIDFFKKINDNEGHLAGDAVIQYIA 911 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q +N+R D+ RYGG+EF+I+L A T + A RI + + + K G +I ++ Sbjct: 912 QKITENIRQQDFAARYGGEEFVIMLPNADMETTCQVASRIGNAISE-KPVPYQGREIPVT 970 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +SIG A+ + D L++ ADE LY+AK +GRNRV Sbjct: 971 VSIGVAVMKENDDANSLLERADERLYMAKNQGRNRVS 1007 >UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQW5_9PROT Length = 360 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 6/200 (3%) Query: 256 TRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKR 315 TR + R+ R+ L+ + +I L + L +R E D LT L NR + Sbjct: 143 TRVMEARNARLHGRLE--RSAEEIARLRKSLV--ATRREASTDGLTGLANRMQFERELRS 198 Query: 316 EIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGG 375 A A GT L +L+ D+D FK NDT+GH GD++LR V + + +R D R+GG Sbjct: 199 AAAKAMEDGTTLCLLMADIDHFKTFNDTYGHMVGDQVLRLVGRVLIEAIRPGDLAARFGG 258 Query: 376 DEFIIVLTEASENETLRTAERIRSRV-EKTKLKAANGEDIA-LSLSIGAAMFNGHPDYER 433 +EF++VL E +E R AERIR R+ EK ++ ++G+D+ ++LS+G + + Sbjct: 259 EEFVVVLPECRLDEAARIAERIRERIGEKHVVRRSSGDDLGTVTLSLGVTAYQPGEVVGQ 318 Query: 434 LIQIADEALYIAKRRGRNRV 453 LI+ AD LY AK+ GRNRV Sbjct: 319 LIERADTGLYDAKQAGRNRV 338 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 97/158 (61%), Gaps = 1/158 (0%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D LT++ NRR EI + R P+S++++D+D FK +NDT+GH GD L +V Sbjct: 268 LDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFKRLNDTYGHQAGDLALCEV 327 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 +Q VR D V RYGG+EF ++L +A+ ++ AERIR + + + + + I + Sbjct: 328 AQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIRLAIAEKSVVLPSQQHIDM 387 Query: 417 SLSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRV 453 + S+G A + H D ERL++ AD+ALY AK +GRNRV Sbjct: 388 TASLGVATYPDHADCKERLVKQADQALYTAKYQGRNRV 425 >UniRef50_A6VUN1 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VUN1_MARMS Length = 345 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 107/172 (62%), Gaps = 5/172 (2%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 EL +++ + D LT L NRR L F +E+ A+ T +PLS+++ID+D FK+IND + Sbjct: 176 ELTQQLKNENI-QDPLTGLFNRRGLNLHFTKELDSADTTSSPLSLILIDIDYFKKINDMY 234 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH+ GD L +++ +R +D + R+GG+EFII+L +NET+ AE+++ + Sbjct: 235 GHDIGDVCLIEIANTLSQAIRKNDIIARFGGEEFIIILPNTPKNETVAIAEKLKVLISNQ 294 Query: 405 KLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRNRVEL 455 K + N ++L+++ G +N + D ++I+ AD+ALY K +GRN VEL Sbjct: 295 KFSSFN---LSLTITQGLTEYNKNNDNALKMIKRADKALYRGKDKGRNCVEL 343 >UniRef50_C5T8S9 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8S9_ACIDE Length = 386 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 69/175 (39%), Positives = 101/175 (57%), Gaps = 7/175 (4%) Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 +L +L E+ +R D LT L NRR+L T RE+ + G PL+VL++D+D FK I Sbjct: 197 SLQAQLTEQANR-----DPLTGLYNRRYLNTALPRELDASAGAGLPLAVLLMDLDHFKLI 251 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 ND GH GD++L +V+ + R++D RYGG+EF++VL + + L A+ R + Sbjct: 252 NDRLGHAAGDDVLCQVAALLLEGTRANDICCRYGGEEFLLVLPGMALDAALARAQAFRQK 311 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVE 454 V + A+G+ +A++LS+G A G LI AD ALY AK GRNRV Sbjct: 312 VADRQW-CADGQPVAVTLSVGVACTLGAALSPAALIDRADRALYQAKAEGRNRVS 365 >UniRef50_A6LZP4 Diguanylate cyclase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZP4_CLOB8 Length = 365 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 99/166 (59%), Gaps = 1/166 (0%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 R+E D LT L N R F A R LS+L ID+D FK+INDT+GHN GD Sbjct: 193 RNEATKDYLTGLNNVREFDNSFNNISQRAVRKEEELSMLFIDIDFFKKINDTYGHNAGDT 252 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 IL+ ++ D R+ D V R GG+EF I+L + S+++ ++ AER+R +VE ++ Sbjct: 253 ILKSLALILLDTCRAYDVVSRMGGEEFSIILLDCSDSKAVKIAERLREKVEDNDFYISDN 312 Query: 412 EDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNRVELW 456 + I +++SIG A + N + L+++AD ALY AK GRN+V L+ Sbjct: 313 KFIKITISIGIASYPNMTTQVDNLLEMADTALYQAKNTGRNKVVLF 358 >UniRef50_Q314H8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q314H8_DESDG Length = 312 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 100/164 (60%), Gaps = 1/164 (0%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 R EV D LT++ NRR+ I +R N G+P +V+ +D+D FK++NDTWGH GD Sbjct: 134 RREVLTDPLTEVGNRRYAEIILERMQVSMNDVGSPYAVIFVDIDLFKDVNDTWGHIVGDN 193 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +L+ V++ ++R D V R+GG+EFII + A+++ ++ ER+R V+++ + Sbjct: 194 VLKMVAKTIESSLRPLDAVCRWGGEEFIICVPGATKDGVMQLMERLRMLVQESWIMHEQ- 252 Query: 412 EDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 IA++ S GAA+ + E + Q ADE LY++K GRN V L Sbjct: 253 HKIAVTASFGAAICSQGESSESVAQRADEQLYLSKNTGRNCVHL 296 >UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G283_HERAR Length = 475 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 117/233 (50%), Gaps = 15/233 (6%) Query: 225 GRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLR 284 G + IA + ++ Q+F+ +F+ + T ++ K L+ I N Q R Sbjct: 248 GMDACTTIAMLENMREKTQEFEALFDMCVLQTDQVDALLQEAKELITIANLGRQ-----R 302 Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 EL E+ R DVLT NRR+ FK E A A+R G PLSV +D+D FK++NDT+ Sbjct: 303 ELEEKTHR-----DVLTGAHNRRYFDEAFKHEFAVASRQGWPLSVAFLDIDHFKQVNDTY 357 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH GD+ L +S+ +R SD RYGG+EF+++ E L RIR V + Sbjct: 358 GHAAGDKALIALSRIIATQIRGSDIFVRYGGEEFVLLFPGTVAEEALIVLNRIRQAV-AS 416 Query: 405 KLKAANGEDIALSLSIGAAMFNG----HPDYERLIQIADEALYIAKRRGRNRV 453 + L++S G A H E L++ AD ALY AK+ GRN++ Sbjct: 417 YCHTYDTATFHLTISAGLAFHMDEDMKHETAEGLLRTADNALYTAKQNGRNQI 469 >UniRef50_A9BT74 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID=A9BT74_DELAS Length = 612 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 103/167 (61%), Gaps = 3/167 (1%) Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 E+ ++H+ DVLT L NRR L +R +A A+ G L+V +D+D FK++NDT GH+ Sbjct: 443 EQAAQHQAMHDVLTGLANRRALQARLQRALAQASGPGQ-LAVCFMDLDGFKQVNDTEGHD 501 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE-ASENETLRTAERIRSRVEKTKL 406 GDE+LR +++ R +D V R GGDEF+++L E AS ++ L+ +R + + + + Sbjct: 502 AGDEVLRIIARRLTTQARETDCVARLGGDEFVLLLDELASADDALQIMQRCLASI-RQPI 560 Query: 407 KAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 + +G + + S+G A+ D +L+Q ADEA+Y AKR G+ R+ Sbjct: 561 RLHSGATVQVGASMGIALNASREDATQLLQRADEAMYAAKRAGKGRI 607 >UniRef50_C1D6E2 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6E2_LARHH Length = 183 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 2/172 (1%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR-TGTPLSVLIIDVDKFKEIN 341 +R L EE+ R + D LT L NRRF+ E A +R P +V++ D+D FK IN Sbjct: 1 MRNLHEEL-RQQSTHDALTGLYNRRFMHKRLLEEAAKLDRHPDQPFAVVLADIDHFKSIN 59 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 DT GH+ GD +L +VS+ F ++R D R+GG+EF+++L + ++ R E +R + Sbjct: 60 DTLGHDMGDTVLTEVSRRFLSHLRQYDVCARWGGEEFLLLLPSTTADQAFRVCEHLRHVM 119 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 T G+ ALS+S G + + D R +Q+AD LY AK GRN V Sbjct: 120 ADTLYHTPEGQPFALSMSFGYSACHVAADLNRALQMADRGLYDAKDAGRNCV 171 >UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYG3_9DEIN Length = 354 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 97/158 (61%), Gaps = 4/158 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT+L NRR L + K+E+ A R G P +VL+ D+D FKE+ND GH GD++LR+V+ Sbjct: 192 DHLTRLTNRRGLEPLLKQELQRAERYGLPFAVLLADLDHFKEVNDRHGHAIGDQVLREVA 251 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 N+R +D V R+GG+EF+I+ + + AER+ +E + + G I ++ Sbjct: 252 PRLDHNLRQADTVARWGGEEFLILAPTTDLAQAGQLAERL---IEVIRSEPVVG-SIPVT 307 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 +SIG + + E L+Q ADEALY AK GRNR+EL Sbjct: 308 ISIGVSCYRAGDSLESLLQRADEALYRAKALGRNRLEL 345 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 99/164 (60%), Gaps = 3/164 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR L + +E ++R G PLS++I+D+D FK+INDT+GH GD +L ++ Sbjct: 145 DPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDYFKKINDTYGHQEGDRVLTILA 204 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +RS D RYGG+EF+++L E E L AER+R V++ + + G + ++ Sbjct: 205 DIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALSIAERLRLEVQEHVFEGSLG-GLVIT 263 Query: 418 LSIGAAMFNGH--PDYERLIQIADEALYIAKRRGRNRVELWKAS 459 +S+G A + + L + ADEALY AK+ GRNRVEL + Sbjct: 264 ISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRNRVELMAGA 307 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR+L F +EI A R + V++ D+D FK+ ND GH+ GD +L+ + Sbjct: 804 DPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDHFKQFNDQLGHDAGDHVLKTIG 863 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + N+R SD RYGG+E IVL + S +TL AE +R + +++ E L+ Sbjct: 864 RILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVKAESLRQAIASMEVEYKGKELGTLT 923 Query: 418 LSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRNRV 453 +S+G A + H + +IQ AD ALY AK GRNRV Sbjct: 924 VSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNRV 960 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 102/172 (59%), Gaps = 5/172 (2%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 L++ E++R +D LT L NRR E + A R+G P ++++ D+D FK +ND Sbjct: 218 LQDELSEIAR----IDPLTGLYNRRAFDECCDIEFSRAQRSGAPFAIIMCDLDHFKRVND 273 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH+ GDE+LR+ + +++R D V R+GG+EF+++L + L AE++R++ Sbjct: 274 RYGHHVGDEVLRRFANTLKEHIRKHDVVARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTA 333 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRV 453 T++ + + LS S G A ++ ++ ++ AD ALY AK++GRNRV Sbjct: 334 DTQITIGDDVCLTLSASFGVAHYDSSDREWSAVLHRADNALYAAKKQGRNRV 385 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 98/157 (62%), Gaps = 1/157 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR++ +REI A R P+ ++++D+D FK NDT+GH GD +LR++ Sbjct: 1180 DALTGLFNRRYMEESLEREIHRAQRHQRPMGIIMLDIDHFKHFNDTFGHEAGDAVLRELG 1239 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 ++R+SD RYGG+E +++L +AS +T + AE+IR V+ +++ + A++ Sbjct: 1240 IFLQRSIRASDIACRYGGEELMLILPDASLADTKQRAEQIRHDVKGLQIEYHHKLLDAIA 1299 Query: 418 LSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRV 453 +S+G A F H + LI AD ALY AK +GR+RV Sbjct: 1300 ISVGVAAFAEHGSTAQELIAAADRALYQAKAQGRDRV 1336 >UniRef50_Q31IP8 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IP8_THICR Length = 540 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 8/185 (4%) Query: 276 VSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335 + Q+ +LL +L +E ++ D LT LLNR+ ++ A P+S+L+ID+D Sbjct: 358 MEQLGSLLNQLRDEATK-----DYLTGLLNRKAFFEQAEQIWLSAKEHHQPISLLMIDID 412 Query: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAE 395 FK IND++GH+ GD +L +V+ F N R D V RYGG+EFII+L E TL A Sbjct: 413 HFKRINDSFGHDAGDRVLIEVANVFSQNCREEDLVCRYGGEEFIILLENKDEQPTLEFAS 472 Query: 396 RIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRV 453 R++ +++ + + GE I S+S+G A + E I AD+ALY AK GRNRV Sbjct: 473 RLKKVIQEMSV-SEQGEVIRFSISVGVATGSALELNSIETFISHADQALYQAKANGRNRV 531 Query: 454 ELWKA 458 E++ A Sbjct: 532 EVFHA 536 >UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgaris RepID=A1VD57_DESVV Length = 487 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 95/158 (60%), Gaps = 3/158 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT+L NRR E+ R G P+++L++D+D FK +NDT+GH GD +LR+V+ Sbjct: 316 DALTQLHNRRSFDHRLAEEVDRHQRYGMPMTLLMLDIDHFKAVNDTYGHPAGDAVLREVA 375 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q + R++D+ RYGG+EF ++L AER+R R+ ++++ +G+ IA++ Sbjct: 376 QTMRNACRTTDFAARYGGEEFCVILPHTDGKCGRIFAERLRKRLASSRVE-VDGKTIAVT 434 Query: 418 LSIGAAMFNGHPDY--ERLIQIADEALYIAKRRGRNRV 453 +SIG A + ERL+ AD ALY AK GRN V Sbjct: 435 VSIGLATLSAAAPLSPERLVCEADGALYAAKAAGRNIV 472 >UniRef50_Q31IH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IH0_THICR Length = 349 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 108/184 (58%), Gaps = 3/184 (1%) Query: 271 QIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 QI+++ ++I+ L +EL + + + D LT + NRR I + + AN + ++L Sbjct: 162 QIQDSSAEIMRLKKELDKATAIAKT--DELTNIPNRRGFNEIIENMMKEANEKQSSFALL 219 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENET 390 ++D+D FK++NDT+GH GD ILR ++++ ++ + D + R GG+EF+ +L S + Sbjct: 220 VLDIDFFKKVNDTYGHLVGDSILRYLAKSLHNETKGKDSIARIGGEEFVAILPSTSYDSA 279 Query: 391 LRTAERIRSRVEKTKLKAANGED-IALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRG 449 L+ A IR ++ L N + I L++SIG AMF + + L AD+ LY+AK G Sbjct: 280 LKLANTIREKIASRPLHVKNNANPITLTISIGVAMFQLNETLDSLFTRADKCLYMAKSNG 339 Query: 450 RNRV 453 RNRV Sbjct: 340 RNRV 343 >UniRef50_Q2SD41 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SD41_HAHCH Length = 313 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 1/158 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + N+R RE++ A R LS+L D+D FK++NDT+GH GD +L++++ Sbjct: 143 DSLTGVANKRAFDYQLHREVSLATRYKYKLSMLFFDIDHFKKVNDTYGHAAGDALLQQLA 202 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + DN R SD FR+GG+EF ++L + AER+R V T + G I+ + Sbjct: 203 KVVQDNCRDSDLCFRFGGEEFAMLLAKTETEGAYAIAERLREAVANTAFQ-HEGHTISFT 261 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 +SIG A ++G + ++ AD+ALY AK GRN+ ++ Sbjct: 262 ISIGVATYDGEENRSDFLERADQALYDAKHAGRNKTKI 299 >UniRef50_B5JTF6 Signaling protein with membrane-bound sensor domain and ggdef domain n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTF6_9GAMM Length = 782 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 2/160 (1%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D LT++ NR + + + ++ R G+P++V+++D+D FK IND WGH GD IL Sbjct: 622 VDPLTQIHNRLSIMQVLDQALSQHRREGSPIAVVMLDIDHFKAINDNWGHPVGDRILTSA 681 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 + +N+R D + RYGG+EF++VL + + AER R + ++ + G I + Sbjct: 682 ASVLANNLREFDEIGRYGGEEFLLVLQGTDVDGAVVMAERCRQSLATIQVLSDEGASIGV 741 Query: 417 SLSIGAAMFNGH--PDYERLIQIADEALYIAKRRGRNRVE 454 S S G A D E LIQ AD ALY AK +GRNRVE Sbjct: 742 SASFGVAASQAQQPTDIEALIQRADRALYRAKEKGRNRVE 781 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 4/162 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRR L I R++AHA++ PL+V ++D+D FK IND +GH TGD L+ + Sbjct: 206 DALTGIHNRRSLFQILDRQVAHAHKQEEPLAVALLDLDHFKRINDEYGHPTGDAALKAAA 265 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + D V R+GG+EF++V+ S ++ + E +R +E+ + + NGE IAL Sbjct: 266 AVLEKGLSEGDSVGRFGGEEFMLVMPNCSRSQCQQRCEALRKSLERVECYSENGEAIALR 325 Query: 418 LSIGAAMFNGHPD----YERLIQIADEALYIAKRRGRNRVEL 455 S G ++G + ++Q+AD ALY AK GRN+V L Sbjct: 326 GSFGVVWYSGQSQRPLVSDGVVQVADAALYRAKNAGRNQVVL 367 >UniRef50_A6GKD7 FHA/GGDEF domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GKD7_9DELT Length = 307 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 99/175 (56%), Gaps = 8/175 (4%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R L+E R D LT + NR + + ++A A R G PLS++I D+D FK+IND Sbjct: 129 RSLYESALR-----DRLTGVFNRGYFNNRLESDVAFALRHGKPLSLVIFDIDFFKQINDD 183 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GD +LR +++ RS D RYGG+EF+++ + R A RI+ V Sbjct: 184 YGHAAGDAVLRDLAERVQGTTRSEDIFARYGGEEFVLICRDVDALRASRAANRIKELVSG 243 Query: 404 TKLKAANGEDIALSLSIGAAMFNG--HPDYERLIQIADEALYIAKRRGRNRVELW 456 + A G DI +S+S+G + + P + L++ AD ALY AKR GRNRVE++ Sbjct: 244 KPFRLA-GRDIEISVSLGVSDLSMLLEPSAQALVEAADSALYAAKRNGRNRVEIY 297 >UniRef50_C6DKF8 Diguanylate cyclase n=5 Tax=Pectobacterium RepID=C6DKF8_PECCP Length = 489 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 113/203 (55%), Gaps = 10/203 (4%) Query: 259 LNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRR-FLPTIFKREI 317 L L + L+ +VS +++ R L + + + + D LT NRR FL + R+ Sbjct: 285 LTTARLNIAMLIMAMLSVSHFVSMNRRLIKIIESNSLK-DALTNTFNRRAFLSMLNGRQG 343 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 N+ L++L +D+D FK++NDT+GH +GDE++ ++ N+R SD + R+GG+E Sbjct: 344 LLMNKRKRQLTLLFLDIDYFKQVNDTYGHASGDELIASFARMLSANIRPSDILCRWGGEE 403 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYER---- 433 F+I + + ++ AE +R E T L ++G +I ++SIG F P YE Sbjct: 404 FVIAAYDLTAEQSAAMAETLRHLTESTPLVLSDGREIRFTISIGVVTF---PQYEGGNTY 460 Query: 434 -LIQIADEALYIAKRRGRNRVEL 455 LI +ADE LY AK +GRNRV L Sbjct: 461 DLIGLADEQLYKAKAQGRNRVCL 483 >UniRef50_D2L189 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L189_9DELT Length = 579 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 90/157 (57%), Gaps = 4/157 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR + + E A R GTP S ++ID+D FK+IND +GH GDE+L +V+ Sbjct: 414 DRLTGLCNRRKIDQAVRAEWRRAKRYGTPFSAVMIDLDNFKDINDRFGHGKGDEVLVRVA 473 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 R +D V R+GG+EF+++ + + AE IR + T+ + G L+ Sbjct: 474 DILIAMTRETDTVGRWGGEEFLLICPQTGLRAAMSLAENIRQEIAATEFPSIGG----LT 529 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 S G A F+G D +++ AD ALY AK +GRNR+E Sbjct: 530 ASFGLAAFSGDADPRQIVDRADAALYQAKAKGRNRIE 566 >UniRef50_UPI0001C31F17 diguanylate cyclase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31F17 Length = 530 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 104/184 (56%), Gaps = 6/184 (3%) Query: 276 VSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335 + I++ LR L SR D LT L NR L KR +A A R+ PL+++++D+D Sbjct: 338 AAPILSGLRTLALAQSRAMT--DALTGLPNRWALQDALKRMLAQAARSERPLALVLLDLD 395 Query: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAE 395 FK++NDT+GH+ GD L V A +R SD R GG+EF ++L + S + AE Sbjct: 396 HFKQLNDTYGHDAGDTALAAVGDALLTGLRESDMAARSGGEEFAVLLPDTSLEGAVAVAE 455 Query: 396 RIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVE 454 ++R+ + L +L+ S G A+ H D + L+++AD ALY AKR GRNRVE Sbjct: 456 QLRAAIAAVDLPLPGA---SLTASFGVAVLPLHAVDADGLMRVADRALYAAKRAGRNRVE 512 Query: 455 LWKA 458 + +A Sbjct: 513 VAEA 516 >UniRef50_A8UVA1 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVA1_9AQUI Length = 711 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 1/159 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L N+R + + EI A R G +VL+ID+D FK INDT+GH+ GD+ LR+ + Sbjct: 301 DPLTGLYNQRVFWELLEYEIERAQRRGYSFAVLMIDLDNFKVINDTYGHDFGDKFLREFA 360 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + R D V RYGGDEF+++L ASE E LR+A R ++ ++A +G+ I + Sbjct: 361 KLMRKTFRREDIVARYGGDEFVVILPYASEEEALRSARRFIEELDNFYVEAPDGKPIKAT 420 Query: 418 LSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVEL 455 +SIG A++ H + + L AD +Y AK G++RV L Sbjct: 421 VSIGIALYPQHGESTQELFLTADNIMYRAKAEGKSRVML 459 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/167 (37%), Positives = 101/167 (60%), Gaps = 3/167 (1%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 R++ D LT L NRR+L ++I + RT +P+S+L++D+D FK+INDT+GH+ GD Sbjct: 533 RYQSMRDPLTGLYNRRYLEDFLLKQIHQSERTKSPISLLMLDLDHFKKINDTYGHDAGDV 592 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 L+++ + +++R D RYGG+EFI+ E AE IR V + ++K Sbjct: 593 ALKELGKILQEDIRVGDIAARYGGEEFIVAFYNTDEKTIKTRAESIREAVSRLQVKYGAQ 652 Query: 412 EDIALSLSIGAAMF--NGHPDYERLIQIADEALYIAKRRGRNRVELW 456 +++SIG A++ +G E LI+ AD+ALY AK G+NR+ L+ Sbjct: 653 PVGPITVSIGVAVYPTDGRNTNE-LIESADKALYFAKTNGKNRIVLY 698 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 5/185 (2%) Query: 274 NTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIID 333 +TV++ IT R+ E+ R+ D LT L NRR +RE+ A RTG P+SV++ D Sbjct: 506 STVAEDITE-RKRREQALRYRASHDGLTGLYNRRHTQRALERELRLAARTGHPVSVVLFD 564 Query: 334 VDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRT 393 +D FK +NDT GHN GD++LR+++ + VR +D V R+GG+EF++VL E + Sbjct: 565 LDHFKRVNDTHGHNAGDQVLRQLAGLVTERVRDTDIVGRWGGEEFLLVLPGTDETGAGQL 624 Query: 394 AERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 AE +R+ V + + + +++S+G A + L + D+ALY AK GRNR Sbjct: 625 AEVLRAYVAEARFPIPD----PVTISLGYAQAGADEGADALFKRVDQALYAAKANGRNRA 680 Query: 454 ELWKA 458 + KA Sbjct: 681 QAAKA 685 >UniRef50_A4J4S9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4S9_DESRM Length = 419 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 8/160 (5%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT+ NR FL + E+A + RTG +ID+D FK++NDT+GH GDEILR Sbjct: 258 DELTEAYNRSFLQEKVQEEMARSKRTGKCFGFCMIDIDHFKKVNDTYGHLVGDEILRAFV 317 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + +R SD V RYGG+EF++VL++ + +E R R+R K K + NGE ++S Sbjct: 318 KFLKLRIRLSDAVIRYGGEEFVLVLSQIAFDEANRIVNRLREDFSKQKFE-VNGESFSVS 376 Query: 418 LSIGAAMFNGHPDYER----LIQIADEALYIAKRRGRNRV 453 S G A++ PD + LI AD ALY AK+ GRN++ Sbjct: 377 FSAGVAVY---PDDSQSLTDLIAAADRALYHAKQSGRNKI 413 >UniRef50_A0L6R6 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L6R6_MAGSM Length = 634 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 6/168 (3%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D +T L NRRFL + + R G + +L+ D+D FK++NDT+GH+ GD +L+ Sbjct: 464 VDPMTGLHNRRFLQECANNLCSGSQRRGKKIGLLMCDLDFFKQVNDTYGHDVGDSVLKIT 523 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 S+ ++VR SD V R+GG+EFII+L + +E + AE+IR ++E T+ + Sbjct: 524 SEILQNSVRQSDLVVRFGGEEFIIILVDIESDEVMGLAEKIRKQIEATEFPVPGKPPLKK 583 Query: 417 SLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRV-----ELWKA 458 ++SIG +++ D + + ++ AD ALY AK GRN+ E+W+ Sbjct: 584 TISIGISVYPDDEDGFWKTLKYADVALYKAKENGRNQSVRFTKEMWEG 631 >UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7I354_THIIN Length = 752 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 4/165 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRR+ E+ A R G+P VL +D+D+FK+IND +GH GD ++R + Sbjct: 582 DTLTGIPNRRYFLARAALELRRAQREGSPFVVLALDIDRFKQINDRFGHQVGDAVIRCFA 641 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV-EKTKLKAANGEDIAL 416 Q +R D R GGDEF I+L + + A+R+R + E + L ++ + + L Sbjct: 642 QTCMQQLRGPDLCGRLGGDEFAILLPQTTRQVAFDVAQRLRLSIQEASCLPSSAPDGLTL 701 Query: 417 SLSIGAAMF---NGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 + SIG A F + D + L+ AD+ALY AK+ GRNRVE+W Sbjct: 702 TTSIGIAEFLPTSTLMDADELLDRADQALYRAKQAGRNRVEIWTG 746 >UniRef50_B3EBA5 Diguanylate cyclase n=2 Tax=Desulfuromonadales RepID=B3EBA5_GEOLS Length = 253 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 1/165 (0%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E R D LT LNR I + EI PL+VL+ D+D FK++NDT+GH Sbjct: 83 ETLRDMANYDQLTGCLNRHAANMILRHEIRRYADQELPLAVLMADIDHFKKVNDTFGHTA 142 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD+IL+K +Q +R D + R+GG+EF+++L E E + A+RIR RVE Sbjct: 143 GDQILKKFAQVAGSALRRCDMLCRWGGEEFLVLLRGTVEEEAFQIADRIRRRVESITFPP 202 Query: 409 ANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 + + L++SIG+A ++E+L+ AD+ALY AK GRNRV Sbjct: 203 YDACGL-LTVSIGSAALLPGGNFEQLVAEADKALYRAKHAGRNRV 246 >UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MFB4_VIBVY Length = 387 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 2/156 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NRR + + RE++ A+R G LS++I+D+D FK IND +GH GD+ L + Sbjct: 228 DTLTNIYNRRAMEEMIPRELSRASRLGAELSIIILDLDHFKRINDQYGHQVGDQTLSGIG 287 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q +R D FR GG+EF++VL + + AE++R ++ +T+ E + Sbjct: 288 QLLTSQLRKQDISFRIGGEEFLVVLPDTPIESAVLVAEKLRQKIAETRFAPKQRE--TWT 345 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 S G A D++ L++ AD ALY+AK +GRNRV Sbjct: 346 ASFGVAQLITGDDWDALMKRADAALYLAKHKGRNRV 381 >UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSI3_ACIC1 Length = 517 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 11/161 (6%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D+LT + NRR L R A A+R P+SV+++D+D FK INDT+GH GD+ L++V+ Sbjct: 350 DMLTGVANRRTLEENLDRMFAQASRAAQPISVVMVDIDHFKHINDTFGHQVGDQTLQRVA 409 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +A RSSD V RYGG+EF++VL + AE +R R+ + ++ Sbjct: 410 RALQQGCRSSDLVARYGGEEFVVVLPDTDLAGAATAAENLRRRIFGLD------AEPRVT 463 Query: 418 LSIGAAMF---NGHPDYERLIQIADEALYIAKRRGRNRVEL 455 +S+G A F G PD+ ++ AD ALY +K GRNRV L Sbjct: 464 VSLGVATFPLHGGSPDH--ILSAADAALYQSKSAGRNRVTL 502 >UniRef50_Q2JCX5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Frankia RepID=Q2JCX5_FRASC Length = 562 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 97/180 (53%), Gaps = 1/180 (0%) Query: 277 SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 ++ L R L H D T+L N + + +REI A + G PLSVL++D+D Sbjct: 375 PPVLLLQRSLLHAELLHAARSDAKTRLANPAYWRQVAEREINRACQVGRPLSVLLVDIDH 434 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK +ND +GH GD IL V+ A R D V R+GG+EF+++LTE AER Sbjct: 435 FKRVNDRFGHLIGDVILIAVADALRAATRPRDLVGRFGGEEFVVLLTEVELENAADVAER 494 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNG-HPDYERLIQIADEALYIAKRRGRNRVEL 455 IR +V T + +++++S+G A +G D LI AD ALY AK GRNRV L Sbjct: 495 IRRQVAGTHCRLEGRPPLSVTVSVGVATHHGPRGDLAGLIARADSALYRAKADGRNRVRL 554 >UniRef50_C1CX77 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CX77_DEIDV Length = 605 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 11/187 (5%) Query: 275 TVSQIITL------LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLS 328 TV+Q I L LRE R + D +T L NRR+L +RE+ A R +S Sbjct: 414 TVAQQIALAIGNLGLRETL----RQQSIRDPMTGLFNRRYLEETMERELHRATRDQQSVS 469 Query: 329 VLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASEN 388 VL +D+D FK+ NDT+GH GD +L ++ + R+ D + RYGG+EFIIVL A Sbjct: 470 VLAVDIDHFKKFNDTFGHEAGDAVLLAAAKTMQEYFRAEDIICRYGGEEFIIVLVNAPHE 529 Query: 389 ETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKR 447 + L A R ++ +K +++SIG A + H D LI AD+ALY+AK+ Sbjct: 530 DILARANGFREKIAALTVKHNRQMLGQVTVSIGVATYAEHGTDVRVLINQADQALYLAKQ 589 Query: 448 RGRNRVE 454 GRNRVE Sbjct: 590 EGRNRVE 596 >UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D095_MYXXD Length = 347 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 15/206 (7%) Query: 263 SLRVKFLLQIRNTVSQIITLLREL----FEEVSRHE-----VGMDVLTKLLNRRFLPTIF 313 S RVK +L+++ ++ REL E +R E D LT L NRR Sbjct: 137 SARVKSMLRLKALQDALVEKNRELDRANKELAARREELLALTRTDALTGLSNRRAFEERL 196 Query: 314 KREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRY 373 E A + R G PLS++++D+D FK IND++GH GD +L+ V+Q +R D + RY Sbjct: 197 NDEFARSRRYGAPLSLVMLDIDHFKRINDSFGHPFGDHVLKAVAQTARARLREVDLLARY 256 Query: 374 GGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG----EDIALSLSIGAAMFNGH- 428 GG+EFI +L E + LR ER+R + +L+ G + + L+ S+G A Sbjct: 257 GGEEFIALLPETGPADALRVCERVRDAIAALELEHVGGSGKPQCVRLTASLGVATVPSGD 316 Query: 429 -PDYERLIQIADEALYIAKRRGRNRV 453 P E L++ AD +LY AK GRNRV Sbjct: 317 LPSAEALLRAADASLYAAKGAGRNRV 342 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 116/205 (56%), Gaps = 14/205 (6%) Query: 258 NLNNRSLRVK----FLLQIRNTVSQIITLL-----RELFEEVSRHEVGMDVLTKLLNRRF 308 N N++L VK F+ + N + T + +EL + + + D LT + NRR+ Sbjct: 570 NKKNQTLYVKGSLNFIKDVENKPVAVFTFVDITKEKELSDMLLKQSTE-DPLTGIYNRRY 628 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 L + + A R PLS+++ D+D FK IND++GH+ GD++L+ +++ +N+R++D Sbjct: 629 LENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGHDVGDKVLKAIAKVVSENIRNTD 688 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH 428 RYGG+EF+I+ E ++ + AE++RS + + E I ++ S G A H Sbjct: 689 IFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNLHFE----EGINVTCSFGVASLEKH 744 Query: 429 PDYERLIQIADEALYIAKRRGRNRV 453 E L++ ADEALY AK+ GRN+V Sbjct: 745 DTKETLLKRADEALYEAKKTGRNKV 769 >UniRef50_Q98C19 Mlr5331 protein n=1 Tax=Mesorhizobium loti RepID=Q98C19_RHILO Length = 381 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/196 (35%), Positives = 107/196 (54%), Gaps = 8/196 (4%) Query: 264 LRVKFLLQIRNTVSQIITLLREL--FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHAN 321 L + +L ++ ++ RE+ ++ S H D LT L NRR K +A Sbjct: 167 LNAQLVLDLKTANEELSAQKREIEVAKQQSDHSANHDALTDLPNRRAFHNELKSVVARCG 226 Query: 322 RTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIV 381 TG +L ID+D+FKE+NDT GH GD +L++VS +RS+D+V R GGDEF + Sbjct: 227 ATGEAAGLLFIDLDRFKEVNDTLGHEAGDALLQRVSSQLRSILRSADFVARLGGDEFAFL 286 Query: 382 L---TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQI 437 TE + + +R AERI R+ + K+ NG I + ++G AM+ D + LI + Sbjct: 287 FSADTELARQKAVRVAERILERL-RIKVPTPNGA-IQVGCTVGVAMYPAEAADCDTLIAL 344 Query: 438 ADEALYIAKRRGRNRV 453 AD +Y+ K+ GRNR+ Sbjct: 345 ADRLMYVGKKSGRNRL 360 >UniRef50_B8FAT3 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FAT3_DESAA Length = 470 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 118/210 (56%), Gaps = 14/210 (6%) Query: 254 RNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSR-----HEVGMDVLTKLLNRRF 308 R+ + LNN + R+ L + + +L+R++ E SR + +D LT++ NRR Sbjct: 268 RDVKRLNNANSRMTKLKK------SLKSLMRQVGEAQSRARILEEQAMVDALTEIPNRRA 321 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 +E + R+G+ S+L++D+D+FK INDT+GH GD L+ V N+RSSD Sbjct: 322 YEERLAQEWSRYQRSGSAFSMLMVDLDRFKSINDTFGHAVGDTCLQGVVSLLKPNLRSSD 381 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF-NG 427 ++ R+GG+EF+I+L + + + E++R +VEK +GE + +++S+G Sbjct: 382 FLARFGGEEFVIILPDTTREGAVMAGEKLRKKVEKANF-VYDGEKVNVTISVGGTKVREA 440 Query: 428 HPDYERLIQIADEALYIAKRRGRNRVELWK 457 D L DEA+Y AK GRNR+ +W+ Sbjct: 441 DKDTNDLFIRLDEAMYQAKESGRNRM-IWQ 469 >UniRef50_Q47HY8 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HY8_DECAR Length = 585 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/228 (34%), Positives = 121/228 (53%), Gaps = 8/228 (3%) Query: 231 GIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLL-----QIRNTVSQIITLLRE 285 AE S+ I + + + + MR TR + + R + L +++ + ++I L RE Sbjct: 358 SCAEKISSSKDITELEDVLGEVMRETRTIQINAQRSRDELRSTQQKVQESEARIQELERE 417 Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L S V D LT LNRR L IF +E A A R T L V +ID+D FK++ND+ G Sbjct: 418 LV--ASSDLVRHDQLTGTLNRRGLEEIFTKEAARATRHDTALCVALIDIDNFKKLNDSMG 475 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H+TGD+ L ++ + +R D V RYGG+EFII+L E S ++ R++ + K K Sbjct: 476 HDTGDQALIHLATICRETLRPQDTVARYGGEEFIILLPETSLDDAAIALTRLQRELTK-K 534 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 E + ++ S G + +I+ ADEA+Y AK+ G+NRV Sbjct: 535 FFLHGNEKVLITFSAGVTQMLPNDTQATVIKRADEAMYQAKKTGKNRV 582 >UniRef50_Q0G665 Periplasmic sensor diguanylate cyclase (GGDEF) n=2 Tax=Aurantimonadaceae RepID=Q0G665_9RHIZ Length = 367 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 94/165 (56%), Gaps = 13/165 (7%) Query: 294 EVGMDVLTKLLNRRFLPTIFKREIA----HANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 E D LT L NRR F+R + AN GTP+S+L+IDVD FK IND++GH G Sbjct: 200 EATTDPLTGLSNRRH----FERRVGPLLQQANHQGTPVSLLVIDVDHFKRINDSFGHEAG 255 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE-KTKLKA 408 D +L +++ VR D + RYGG+E ++ + A + AERIR+ +E K +++ Sbjct: 256 DTVLVWIAEIVRSQVRGCDIIARYGGEELVVAMPGADSRRAMTVAERIRAVIEAKGRIEP 315 Query: 409 ANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +G I +S+ + + Y L ADEALY AKR+GRNRV Sbjct: 316 GDGHRITVSIGVSTRLAR----YADLFSAADEALYAAKRQGRNRV 356 >UniRef50_A6D653 PAS:GGDEF n=1 Tax=Vibrio shilonii AK1 RepID=A6D653_9VIBR Length = 218 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 10/186 (5%) Query: 274 NTVSQIITLLRELFEEVSRHE-----VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLS 328 N V I L ++ + V+RH DVLT L NRRFL K EIA R G +S Sbjct: 10 NEVVGIFGLAIDISKTVARHNELEFLAIRDVLTGLYNRRFLELQLKHEIASFKRHGHDMS 69 Query: 329 VLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASEN 388 L++DVD FK IND +GH+ GD +L+ + + VR D+ FR+GGDEF I+L + S Sbjct: 70 CLMLDVDGFKSINDRFGHSIGDYVLQSIGKTLLGAVREEDFCFRFGGDEFTILLPKTSLP 129 Query: 389 ETLRTAERIRSRVEKTKLKAANGEDIALSLSIG-AAMFNGHPDYERLIQIADEALYIAK- 446 + R AER+R V L ++ G + +S+G A++ G D +L+ +AD+AL K Sbjct: 130 DAYRLAERVRESVASKTLYSSTGHPFKIKISLGVASLQKGLED--QLLALADKALMEVKL 187 Query: 447 -RRGRN 451 +G+N Sbjct: 188 NAKGKN 193 >UniRef50_A6EXZ6 Diguanylate cyclase n=1 Tax=Marinobacter algicola DG893 RepID=A6EXZ6_9ALTE Length = 359 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/157 (44%), Positives = 97/157 (61%), Gaps = 2/157 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NR L IF+RE A R TP+++L +D+D FKE+ND +GH+TGD L+ V+ Sbjct: 184 DTLTGLANRARLSDIFEREQQRARRYNTPMTLLALDLDHFKEVNDRYGHDTGDLTLQHVA 243 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + F + +R++D R GG+EF I+LT + + L AE+IR V T L N + I L+ Sbjct: 244 RIFRECLRATDLPARLGGEEFGILLTNTNGQQGLEVAEKIRIAVASTPLT-VNNDVIRLT 302 Query: 418 LSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRNRV 453 LS G A F D R L++ AD+ LY AK RGRN + Sbjct: 303 LSGGVAEFGPDGDTLRQLVREADKRLYEAKDRGRNLI 339 >UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW5_9GAMM Length = 274 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/156 (38%), Positives = 95/156 (60%), Gaps = 4/156 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NR + T+ RE+A A+R G P ++++ D+D FK +NDT+GH GD +L++V+ Sbjct: 113 DRLTGVANRHYFETLLNRELARADRYGAPFALVMFDLDHFKRVNDTFGHAAGDVVLQEVT 172 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + + +R +D + R+GG+EF+++L E + R AE +R+RVE A ++ Sbjct: 173 RVIAERLRDADVLGRWGGEEFMVLLPGTQEADAARVAETMRARVEGHDFPEAG----RVT 228 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +S+G A F L++ DEALY AK GRNRV Sbjct: 229 ISLGVAAFCAGEPRTGLLRRVDEALYRAKGEGRNRV 264 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 96/158 (60%), Gaps = 2/158 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D +TKL NRR+ I + + + R LS+L+ID+D+FK +NDT+GH GDE+L +S Sbjct: 401 DSMTKLYNRRYFTEISAKVLHLSKREKNNLSILMIDIDRFKVVNDTYGHQFGDEVLIALS 460 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + ++ R SD V RYGG+EF+I+L S + A++IR VE ++A ++ + Sbjct: 461 RLLVEHQRKSDIVCRYGGEEFVILLPNTSLKDATNIAQKIRILVESLTMEAPTNKEFKFT 520 Query: 418 LSIGAAMFN--GHPDYERLIQIADEALYIAKRRGRNRV 453 +SIG A + D + ++ AD+ALY AK GRNRV Sbjct: 521 ISIGVAQIDVEHEDDIKFALKRADDALYRAKNSGRNRV 558 >UniRef50_C1SP72 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP72_9BACT Length = 643 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 89/156 (57%), Gaps = 4/156 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LTKL NR + I EI A R G SVLI D+D FK++ND +GH TGDE+L+ ++ Sbjct: 489 DPLTKLYNRIKVDEILDYEIEQAGRYGKDFSVLISDIDHFKDVNDNFGHQTGDEVLKIIA 548 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + DN RSSD V R+GG+EF+I+ T + AE++R+++E ++ Sbjct: 549 ELLNDNTRSSDTVARWGGEEFLIIFTNTPLEDAATIAEKLRTKIESYDFPVGR----TVT 604 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 S G A + E I+ AD+ALY AK + RN V Sbjct: 605 ASFGVAQYVNGEQKEHFIKRADDALYAAKNKSRNVV 640 >UniRef50_D1B7Z4 Sensor protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7Z4_THEAS Length = 917 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/169 (40%), Positives = 103/169 (60%), Gaps = 5/169 (2%) Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 ++RH D LT LLNRR + + +RE+A + R G LSV ++D+D+FK INDT+GH G Sbjct: 753 MARH----DQLTGLLNRRAVIEMEEREMARSVREGGSLSVAMMDIDRFKAINDTYGHLAG 808 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D++LR+V++ +R D V RYGG+EF+++L AS + R ER+RS + + Sbjct: 809 DQVLREVARRVGSKLRVYDVVGRYGGEEFLLILPGASLGDAKRLCERMRSAIGSEPV-LY 867 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 +G I ++ S G A F ++L +AD+ALY+AK GR+ V A Sbjct: 868 DGLQIPVTASFGVAEFVPQLTVDQLNNLADQALYLAKASGRDAVRALGA 916 >UniRef50_B9Z8H8 Diguanylate cyclase with GAF sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8H8_9NEIS Length = 631 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/156 (41%), Positives = 94/156 (60%), Gaps = 1/156 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT ++ R I ++E R G LS+ +ID+D FK IND++GH GDE L++V+ Sbjct: 470 DELTGVMRRGHFTEIAEKEFGRTKRYGGRLSMFLIDLDYFKRINDSFGHYGGDETLKRVA 529 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 F +RSSD + R GG+EF ++L E+E AER+R VE++ ++A +GE I ++ Sbjct: 530 IVFQQVLRSSDILGRLGGEEFAVLLPNTPESEAKEVAERLRHEVEESTIQALSGE-IRVT 588 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +SIG A D+ + D ALY AKRRGRN V Sbjct: 589 ISIGVAELAAEDDFTAIYNRCDAALYEAKRRGRNCV 624 >UniRef50_C9R9C2 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R9C2_AMMDK Length = 267 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 109/198 (55%), Gaps = 24/198 (12%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 +FL QI + + L++ E D LT L NR L I + + + + Sbjct: 78 TEFLTQILVVIDAFLLQLKDRVER--------DPLTGLYNRLALYPILSQMLKKSQEEES 129 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 PL V ++D+D FK +ND +GH+ GDE+LR + N+RS D VFRYGG+EF+IVL Sbjct: 130 PLVVAMLDLDNFKTVNDEYGHHAGDEVLRAAAGIIKKNLRSGDKVFRYGGEEFLIVLPNT 189 Query: 386 SENETLRTAERIRSRVEKTKLKAAN----GEDIALSLSIGAAMFNGH----PDYERLIQI 437 S ++ + ERIR ++ AAN G + +++ SIGAA + G PD LI Sbjct: 190 SLDKAVVALERIRGQI------AANLFIPGTETSITASIGAAGYTGKGSVSPD--DLILQ 241 Query: 438 ADEALYIAKRRGRNRVEL 455 AD+ALY AKR G+N+V L Sbjct: 242 ADKALYRAKREGKNKVVL 259 >UniRef50_D2QYB7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYB7_9PLAN Length = 569 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 98/159 (61%), Gaps = 6/159 (3%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D +T LL ++ + +E + R PLS ++ D D FK INDT+GH GDE++R++ Sbjct: 139 DPMTGLLTKKVFHEMLVKEWGRSTRHHFPLSCVMFDCDFFKRINDTYGHPVGDEVIRRIG 198 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + N R SD + R+GG+EF ++L E +E+ AERIR V ++ +G+++A++ Sbjct: 199 RTLSSNCRGSDVIARFGGEEFAVLLPETTESNAAIWAERIRKLVAADRI-MVDGKELAIT 257 Query: 418 LSIGAA---MFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +S G A + N PD +L+ +AD+AL +AKR GR+R+ Sbjct: 258 ISGGVAQRMVDNAQPD--QLVDMADQALLVAKRSGRDRI 294 >UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TNG7_RICCO Length = 204 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 4/165 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LTK+ NRR ++E+A A R+G PL+ L++D+D FK+IND +GH GDE+L ++ Sbjct: 30 DPLTKIFNRRAFMIQAEKELAAAERSGLPLAFLMLDIDHFKQINDKYGHAAGDEVLVRIV 89 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + ++R D + RYGG+EF +L + AE++R V T+++ + L+ Sbjct: 90 EVLSSHLRKQDTLGRYGGEEFCALLPGTDAQGAMALAEKLRLEVAMTRIEVEE-NSLGLT 148 Query: 418 LSIGAAM---FNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 LSIG + DY L++ AD ALY AK GRNR L++ + Sbjct: 149 LSIGGSTWEHLGPTKDYRELMEEADRALYQAKTGGRNRSLLYRTA 193 >UniRef50_C6DJJ8 Diguanylate cyclase n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DJJ8_PECCP Length = 480 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 12/200 (6%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEV-------GMDVLTKLLNRRFLPTIFKREIA 318 + +L QI +V I L+ F +R + D LT +LNRR L I Sbjct: 278 LSYLFQINTSVIIITVLIASFFINKNRKNIKRIELISNHDALTGMLNRRSLNQ-HMMNII 336 Query: 319 HANRTG--TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 ++ R G +S+L++D+D FK++NDT+GH GD ++R+ S R D + R+GG+ Sbjct: 337 NSTRDGDNKIMSLLVLDIDHFKKVNDTYGHAVGDNVIREFSTTLKQYTRPQDLLCRWGGE 396 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH--PDYERL 434 EF+I++ S N+ L AERIRS +E L ++G + + SIG + F D+ Sbjct: 397 EFLIIIQGLSVNDCLDIAERIRSIIEGAPLAISDGHIVRCTTSIGVSFFQLERIEDFHEA 456 Query: 435 IQIADEALYIAKRRGRNRVE 454 + ADE LY+AK +GRNRV Sbjct: 457 FKEADELLYMAKEQGRNRVN 476 >UniRef50_B3PFT6 AbfX GGDEF domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFT6_CELJU Length = 297 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 3/161 (1%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D LT++ NR + RE+ A R LS+L+IDVD FK IND +GH GD++L++V Sbjct: 136 LDPLTRIGNRTAMDIALNRELQIAERYRQDLSLLLIDVDHFKRINDQFGHTRGDQVLKEV 195 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 + + R SD FRYGG+EF+++L + + AERIR RV T+L+ NG Sbjct: 196 TGIIQQSSRGSDLTFRYGGEEFVVILGKTNTRGAHIIAERIRERVASTQLE-HNGHSFQS 254 Query: 417 SLSIGAA--MFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++SIG A + + + L + AD+ALY AKR GRNRV L Sbjct: 255 TVSIGIASHLRDKKDSVQDLFERADKALYCAKRDGRNRVIL 295 >UniRef50_A8GZ56 Diguanylate cyclase n=3 Tax=Alteromonadales RepID=A8GZ56_SHEPA Length = 456 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/156 (41%), Positives = 95/156 (60%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR + E+ R + VL++DVD FK+INDT GH+ GD++L ++S Sbjct: 296 DQLTGLANRRKFHEFAQEELNRVQRNKSQFWVLVMDVDFFKKINDTAGHDMGDQVLIELS 355 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + ++VR+ D V R GG+EF I+L++ ++ R AE IRS +E K+K ++ Sbjct: 356 KVLKNSVRAVDLVSRMGGEEFSIILSDTTKQGAERVAESIRSSIESIKIKGWTDIYGPIT 415 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 SIG A +G E ++IAD ALY AK+RGRN+V Sbjct: 416 ASIGGATSDGADKLENTLKIADSALYQAKQRGRNQV 451 >UniRef50_B8GMH9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMH9_THISH Length = 370 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/174 (39%), Positives = 99/174 (56%), Gaps = 8/174 (4%) Query: 293 HEVGM-DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 E+G+ D LT L NRR+ E A R PL+ L +D+D+FK IND GH GD+ Sbjct: 187 RELGLTDPLTGLRNRRYFDEQLPMECQRARREQGPLACLFVDIDRFKSINDVHGHPAGDQ 246 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +R+V+Q +VR D + RYGG+EF+I+L+ T AER+R V + + A+G Sbjct: 247 AIREVAQRISAHVRPFDLLARYGGEEFVILLSRLDAAATREVAERVRQAVAQRPVSLADG 306 Query: 412 EDIALSLSIGAAMF-----NGHPDY--ERLIQIADEALYIAKRRGRNRVELWKA 458 ++ LS+S+G A+ P+ RL++ AD AL AK+ GRNRV + A Sbjct: 307 PELELSVSLGGAVCARWDSRDEPEQTGRRLMEAADLALLEAKQSGRNRVVMAAA 360 >UniRef50_B9Z1A1 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1A1_9NEIS Length = 593 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 3/170 (1%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 E+ E + +V D LT NRR L F+REI+ A RT +PLSV +IDVD FK++ND + Sbjct: 414 EIALEAASAKVKEDQLTGAYNRRGLAEHFQREISRAERTNSPLSVALIDVDNFKQLNDHY 473 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH TGD+ L+ + +R SD V R+GG+EF+I+L + E ++ +R++ + KT Sbjct: 474 GHLTGDDALKHLVNVTRHTMRPSDIVARFGGEEFVILLPDTPPPEAIQAIQRLQRELTKT 533 Query: 405 KLKAANGEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRV 453 AN + + ++ S G A ++ G D + +I+ AD+A+Y AK G+NRV Sbjct: 534 -FFLANNDRLLITFSAGVAKWHLGERDTD-VIERADQAMYQAKISGKNRV 581 >UniRef50_B8FB82 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB82_DESAA Length = 309 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 6/196 (3%) Query: 263 SLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 SLR+K +L+ R + L+ +L E D LTKL N R EI A R Sbjct: 114 SLRIKRVLRERAFDQEREKLMGKLQELAV-----TDGLTKLYNSRHFYETLDVEIRRARR 168 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 G PLS+L+ D+DKFK NDT+GH GD L ++++A D +R +D FRYGG+EF +++ Sbjct: 169 YGRPLSLLLFDIDKFKNFNDTYGHIEGDRALARIARAVQDCIRLTDTAFRYGGEEFTVLM 228 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 E E E L +R+ + + +G+D+ L++S+G D +++ DEA+ Sbjct: 229 PETDEEEALGVGQRVCEEA-RDLVHRVDGKDVHLTISVGVTQCIPGEDLADMVKRVDEAM 287 Query: 443 YIAKRRGRNRVELWKA 458 Y AKR G N+V A Sbjct: 288 YKAKRAGGNQVAALSA 303 >UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A1WD95_ACISJ Length = 382 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 92/158 (58%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR++ + + E A A R+ PL + +D+D FK +NDT GH GD L+ + Sbjct: 223 DELTGLPNRRYMLEMMRLEHARAQRSRQPLLLAQLDLDHFKAVNDTHGHAAGDVALQSFA 282 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q + VR+SD + R+GG+EF++++ + R ER+R+ V T + G ++L+ Sbjct: 283 QTVHGCVRASDLLARWGGEEFLLLMANTHPADGTRLLERVRATVAATPVALPGGTQLSLT 342 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 +S+G A L+Q AD ALY AKR GRNRV L Sbjct: 343 VSVGLAELAHGESTAALLQRADAALYGAKRLGRNRVLL 380 >UniRef50_B8DNJ7 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DNJ7_DESVM Length = 569 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 104/186 (55%), Gaps = 9/186 (4%) Query: 270 LQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSV 329 L+I +Q +T L E ++ D LT NRR L E+A + R+G PL++ Sbjct: 361 LRIIEGNNQALTRLNEELRRIAER----DHLTGCFNRRRLDEAMNAELARSARSGHPLAL 416 Query: 330 LIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENE 389 ++D+D FK +ND GH GD +L V++ + +R D + R GG+EF ++L + E E Sbjct: 417 AMLDLDHFKAVNDQHGHGVGDAMLAHVTEIIRNQLREPDLLARVGGEEFALLLPDTGERE 476 Query: 390 TLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE--RLIQIADEALYIAKR 447 + ER+R +V++T L A+G + +++ A + PD E R + +AD ALY+AKR Sbjct: 477 AVTLLERVRRKVQETPLPHADGP---IPMTVSAGVAESRPDIEPGRWMHVADAALYMAKR 533 Query: 448 RGRNRV 453 GRNR Sbjct: 534 CGRNRT 539 >UniRef50_C0GMG6 Diguanylate cyclase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMG6_9DELT Length = 486 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 112/186 (60%), Gaps = 5/186 (2%) Query: 272 IRNTVSQIITL-LRELFE-EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSV 329 I N+ ++ ++L LR E + ++E D LT + NR+ ++E+ R LS+ Sbjct: 288 IINSAARHLSLSLRNALEYKAVKYEAEFDGLTCINNRQHFDKKLRKELKRHQRQVNSLSL 347 Query: 330 LIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENE 389 +++D+D FK +NDT+GH TGD +LRK+ + D VR +D+ RYGG+EF+I+L E +E + Sbjct: 348 IMLDLDHFKTLNDTYGHVTGDMVLRKIGEILVDTVRETDFPARYGGEEFVILLPETTEEQ 407 Query: 390 TLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKR 447 +RIR ++ +T+ + G+ +++ S+G A P + L++ AD+ALY++K Sbjct: 408 AWLLGQRIRQKIGQTEFE-VQGKKFSITASLGVASIKPGPLTPKDTLVEQADQALYLSKF 466 Query: 448 RGRNRV 453 GRN V Sbjct: 467 NGRNMV 472 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/171 (38%), Positives = 102/171 (59%), Gaps = 7/171 (4%) Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 E R E D LT L NRR+L F++E+A A R+G + +L++D+D FK ND +GH Sbjct: 901 LRETLRQENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYFKRFNDEFGH 960 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 + GD +L++V++A + VR+SD V R+GG+E I++ AS + R A++IR + + + Sbjct: 961 DAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQIRQAIAQLII 1020 Query: 407 KAANGEDIALSLSIGAAMFNGHPD----YERLIQIADEALYIAKRRGRNRV 453 +L++SIG A F P+ + LI+ AD +LY AK GRN V Sbjct: 1021 SYHEQTLPSLTISIGVAAF---PESGLASDTLIKSADTSLYQAKAAGRNCV 1068 >UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP43_9GAMM Length = 336 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 5/181 (2%) Query: 278 QIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKF 337 ++ LR+ EE+ R D LT + NR+ T + E+A A R PLS++ +D+D F Sbjct: 154 EVEATLRQQQEELVRL-ASTDALTGVWNRQKFKTEAEHEVARAERYNLPLSLIFLDLDYF 212 Query: 338 KEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERI 397 KE+ND +GH TGD ILR++ Q +R SD + R+GG+EF+I++ A + AE++ Sbjct: 213 KEVNDRYGHATGDAILREMCQRLQACLRESDRLGRWGGEEFLILVPHADSDRAALLAEKL 272 Query: 398 RSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 R + T AA+G+ +S+S+G E L++ AD ALY AK RGRNRVE+ + Sbjct: 273 RQAIADT--PAAHGQ--PMSISLGVVSREPGDALEDLVRKADAALYRAKARGRNRVEVHR 328 Query: 458 A 458 A Sbjct: 329 A 329 >UniRef50_Q21JZ6 GGDEF domain n=2 Tax=Alteromonadales RepID=Q21JZ6_SACD2 Length = 325 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 97/156 (62%), Gaps = 1/156 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT + NR+ + F REI + R TPLS+++IDVD FK++NDT+GH GD++L+ + Sbjct: 146 DPLTGIGNRQAMDNCFAREIKLSLRHQTPLSLMLIDVDFFKKLNDTYGHRAGDKMLKHIV 205 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +++R +D +FR+GG+EF+++L TAERIR T ++ +GE++A + Sbjct: 206 TNIKNSLRETDQIFRFGGEEFVVLLHNTDAENARLTAERIRIHSAITPME-IDGENVAST 264 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +S+G + E + AD ALY AK+ GRN+V Sbjct: 265 ISLGVTTLIDTDNVESFFERADCALYQAKKEGRNKV 300 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 3/161 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT+LLNRR L E+ A R + L++L+ID+D FK++NDT+GH GD++LR V Sbjct: 331 DPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVGDDVLRDVG 390 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL-KAANGEDIAL 416 Q +R SD RYGG+EF+++L E + + AERIR +E+ + + E + L Sbjct: 391 QLLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFARDSMAEPLKL 450 Query: 417 SLSIGAAMFNGH--PDYERLIQIADEALYIAKRRGRNRVEL 455 + SIG A+F + E L AD ALY AK GRNRV + Sbjct: 451 TASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNRVRM 491 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 +D LT LLNRR + E++ R+ + L++D+D+FK+INDT+GH GD +L + Sbjct: 293 IDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFKKINDTYGHQAGDAVLSEF 352 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 +VR D V RYGG+EF+++L + S + TAE+IR+ T + A G IA+ Sbjct: 353 GATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIRAVTAATPIMFA-GRQIAV 411 Query: 417 SLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + SIG +M G + +I AD ALY AK GRNRV +A+ Sbjct: 412 TTSIGISMMQGDETAKAMIARADAALYEAKNSGRNRVVCAEAN 454 >UniRef50_A8EV29 EAL/GGDEF domain protein n=2 Tax=Campylobacterales RepID=A8EV29_ARCB4 Length = 851 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 1/159 (0%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L N+R + + EI A R ++++ID D FK IND +GH+ GD +L+ V+ Sbjct: 436 DPLTDLFNQRVFNDMMRYEIKRAQRHNYSFALMVIDCDNFKPINDNFGHSFGDTLLQTVA 495 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 R D V RYGGDEF I+L E +E E + A RI ++ K+ A +G +I ++ Sbjct: 496 TTLKKEKRDEDIVARYGGDEFTIILPECTEKEAMIVANRISKKMATEKIVAPDGSNIGIT 555 Query: 418 LSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRNRVEL 455 +SIG ++ H ++ + IAD +Y AK G+N +++ Sbjct: 556 ISIGICVYPTHTTSQKDMFIIADSMMYQAKEEGKNAIKI 594 >UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR80_ACIC1 Length = 710 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 2/155 (1%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L N R+L EI A R PL++L+ID+D+FK+IND GH GD +L +++ Sbjct: 512 DALTGLWNYRYLTMTLGHEIERATRFRRPLALLMIDLDRFKDINDRHGHQAGDAVLVELA 571 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + + VR D V RYGG+EF+++L E + TAER+R V T DI ++ Sbjct: 572 RRLHTTVREVDTVARYGGEEFVVILPETDADGAAHTAERLRQAVRGTPFHVEQ-MDIPVT 630 Query: 418 LSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRN 451 SIG A+F H L++ ADEALY+AK GR+ Sbjct: 631 ASIGIAVFPRHGSSAAILLRAADEALYVAKHSGRD 665 >UniRef50_Q30QE3 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QE3_SULDN Length = 416 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/159 (43%), Positives = 100/159 (62%), Gaps = 4/159 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR+ +++REI A R T ++ +++D+D FK+ NDT+GH GD L+ V+ Sbjct: 239 DSLTSLHNRRYFNMVYEREIKRAKRNYTYITFMMLDIDYFKQYNDTYGHVKGDVALKSVA 298 Query: 358 QAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK-AANGEDIA 415 F + + R D+VFR GG+EF I+LT+ SE T+ TA+ I + V++ K++ A+ D Sbjct: 299 SVFKELLKRPGDFVFRLGGEEFGILLTDTSEVNTITTAQNICNAVKELKIEHEASKIDTF 358 Query: 416 LSLSIGAAMF--NGHPDYERLIQIADEALYIAKRRGRNR 452 L++SIG A + D E LI ADE LY AK GRNR Sbjct: 359 LTISIGVACCVADSALDEEVLINKADEMLYSAKEGGRNR 397 >UniRef50_A9BVC7 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A9BVC7_DELAS Length = 583 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 98/164 (59%), Gaps = 5/164 (3%) Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 H+ D LT LLNRR +A A R+G PLSVL+IDVD FK IND GH+ GD + Sbjct: 422 HQARSDPLTGLLNRRGFDFQLDFAMALARRSGRPLSVLVIDVDHFKRINDQHGHDMGDAV 481 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE 412 LR +++AF +R SD + R GG+EF+ +L + + + + AE++R + T + A+GE Sbjct: 482 LRTLARAFRMRLRESDVLARMGGEEFLALLPDTTADAAVVIAEQLRELLATTPM--AHGE 539 Query: 413 DIALSLSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRNRVEL 455 + + S+G A G D +++ DEALY AK GRN V+L Sbjct: 540 PV--TASVGVATLRGTTDTATAMLRRGDEALYEAKGAGRNNVQL 581 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 124/229 (54%), Gaps = 13/229 (5%) Query: 235 VGHISRLI-QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVS-- 291 VGH ++ F ++ + + +N+ + + +L+ T++ II+ ++ E++ Sbjct: 333 VGHTFFVVFNGFAVLYYKGLVQPNYINSHGVGIGIVLEAL-TLAFIISYRIKVLEDIRSK 391 Query: 292 ----RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 + + D LT+L NRR+ + + A +G PLSV+ ID+D FK +NDT GHN Sbjct: 392 QDELKRQASTDPLTRLFNRRYFMAEGEYVLEQARTSGEPLSVIAIDIDHFKAVNDTHGHN 451 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GD +L +V+ F R D V R+GG+EF+I+L A E AERIR+ VE + Sbjct: 452 VGDLVLVEVASVFRQFSRDRDLVARFGGEEFVILLPGADLTEGFGCAERIRNAVEAMVID 511 Query: 408 AANGEDIALSLSIGAAMFNGHPDYERL---IQIADEALYIAKRRGRNRV 453 +G + +++S+G A N P E + ++ AD +LY AK GRNRV Sbjct: 512 GGDGLAVRVTVSVGVAEVN--PLLESVEGAVKRADRSLYEAKAGGRNRV 558 >UniRef50_A3Y705 GGDEF domain protein n=2 Tax=Oceanospirillaceae RepID=A3Y705_9GAMM Length = 410 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 4/163 (2%) Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LTKL+NRR+ +F + + N T PL + I D+D+FK +NDT GH GD+ L K + Sbjct: 245 DPLTKLINRRYFFELFDQALDEQNNTKPPLQLCICDLDQFKGVNDTLGHQAGDKALIKFA 304 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + + + + V R+GGDEF+I + S E E IR+R+EKT N +++ Sbjct: 305 EILSEVMTNQGIVGRFGGDEFVICFIDKSRQECENLLETIRARLEKTVFTLDNASSFSIT 364 Query: 418 LSIGAAMFNGHPDYE----RLIQIADEALYIAKRRGRNRVELW 456 + G A G + L + AD+ALYIAK+ GRN+V L Sbjct: 365 GTFGVAHLEGGQKTKLSMNHLFETADKALYIAKQNGRNQVCLL 407 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 96/161 (59%), Gaps = 4/161 (2%) Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 H +D LT NRR L E+ A+R PLS+L++D+D FK++ND +GH TGD++ Sbjct: 369 HLASVDKLTDTFNRRALDKALLAELERADRYQRPLSILLMDIDLFKQVNDEYGHLTGDKV 428 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE 412 L +SQ +N+R+SD + R+GG+EF+++ E + AE++R +E T + Sbjct: 429 LVTLSQTIRENLRASDILGRWGGEEFLVICPETDLEQARNVAEKVRQAIEGTDFELGK-- 486 Query: 413 DIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +++SIG ++ E L+ AD+ALY AK +GRNRV Sbjct: 487 --TITISIGLSVLIEGTSAESLVAEADKALYQAKSQGRNRV 525 >UniRef50_Q7NSG5 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NSG5_CHRVO Length = 420 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 99/165 (60%), Gaps = 1/165 (0%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E + +V D LT NRR L F+REI A RT PLS+ +IDVD FK++ND +GH Sbjct: 249 EAASAKVKEDQLTGAYNRRGLAEYFQREIGRAERTAAPLSIALIDVDNFKQLNDRYGHLA 308 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD+ L+ + ++R +D V R+GG+EF+I++ + E E ++T +R++ + KT Sbjct: 309 GDDALKYLVDTIKHSLRPADIVARFGGEEFVILMPDTPETEAVQTVQRLQRELTKT-FFL 367 Query: 409 ANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 AN + + ++ S G A ++ +++ AD A+Y AK G+NRV Sbjct: 368 ANNDKLLITFSAGVARWHLGEQESDVLERADHAMYQAKINGKNRV 412 >UniRef50_A9FTU9 Putative membrane protein (GAF and GGDEF domain) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FTU9_SORC5 Length = 859 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 4/168 (2%) Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 MD LT LLN+R + + ++I A R LSVL+ D+D FK++NDT+GH+ GD I++ + Sbjct: 550 MDGLTGLLNKRAMLEVADQKITAARRFSRRLSVLVTDIDHFKKVNDTYGHDVGDVIIKGL 609 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE---D 413 R++D V R+GG+EF+++ E + AER+R + +T AA Sbjct: 610 GDVLRRAKRTTDAVARFGGEEFVVICEETDARGAMLLAERVREELGRTTFHAAGSSGPVQ 669 Query: 414 IALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 ++ SIG A + +E L + ADE+LY++KR GRNR W ++ Sbjct: 670 CQVTCSIGIATYPEAGSTWEELFKAADESLYVSKRSGRNRSTAWSPAV 717 >UniRef50_C8W0S4 Diguanylate cyclase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W0S4_DESAS Length = 381 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/195 (37%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 255 NTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEV---SRHEVGMDVLTKLLNRRFLPT 311 N L N SL +K ++ + ++ + LF + R VG+D LT L NR+F Sbjct: 178 NFVGLLNPSLNLKTVVLYNAIIVSLLLICSILFFYLIDKLRKGVGIDTLTGLWNRQFFHV 237 Query: 312 IFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVF 371 + E+ NRTG P S+ IIDVD FK+INDT+GH GD L+K++ NVR D V Sbjct: 238 NLQEELERTNRTGNPTSLAIIDVDNFKKINDTFGHLAGDVALKKIANTLRQNVRRIDTVV 297 Query: 372 RYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY 431 R+GG+EF IV + A ERIR VE + +++SIG + N + Sbjct: 298 RWGGEEFAIVFSNADIETAYEVVERIRKSVEAIEFMC------QITISIGLSSTNLTTNL 351 Query: 432 ERLIQIADEALYIAK 446 + L+ +AD+ALY AK Sbjct: 352 DELVHVADKALYRAK 366 >UniRef50_C8X1R3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1R3_DESRD Length = 457 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/176 (37%), Positives = 102/176 (57%), Gaps = 2/176 (1%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 I+ +E E+++R D LT + R+ + R +A R PL+V ++D+D FK+ Sbjct: 277 ISTRKEAEEQLARIAT-TDSLTNVSTRQHFMELANRALAQHLRNSRPLTVCMLDIDHFKQ 335 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 INDT+GH TGD L ++ +R++D + R+GG+EF IVL E ++E + A RIR+ Sbjct: 336 INDTYGHGTGDRALAWFAETVSGELRATDIIGRFGGEEFCIVLPETDQDEAQQVAHRIRT 395 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 V AA +++SIG A+ + E +IQ+AD ALY AK +GRNR E+ Sbjct: 396 AVTGGS-SAAASPIPPITVSIGIALADTPASMEAVIQLADRALYAAKAKGRNRAEI 450 >UniRef50_Q2W9B2 GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W9B2_MAGSA Length = 352 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 103/180 (57%), Gaps = 3/180 (1%) Query: 277 SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 S + LR +++ R E D LT+L NR+ + A PLS+L+ID+D Sbjct: 160 SNEVARLRNHLDDLKR-EASTDALTQLANRKLFDHSLNLAVLDARAADAPLSLLMIDIDH 218 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK+ NDT+GH GD++L+ V+++ + ++ D RYGG+EF ++L +++ AE Sbjct: 219 FKQFNDTYGHQLGDQVLKLVARSLSEVAQAKDTAARYGGEEFAVILPATPLEKSMEVAET 278 Query: 397 IRSRVEKTKLKAANGEDI--ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 IR++V +L + ++LSIGAA+ + L+ ADEA+Y+AKR GRNRV+ Sbjct: 279 IRNQVSTKRLTNRRTGQVLGQVTLSIGAALLREAEAPDSLVHRADEAMYLAKRDGRNRVK 338 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteria... 645 0.0 UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteria... 626 e-178 UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID... 555 e-156 UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 517 e-145 UniRef50_C1DFY2 GGDEF domain protein n=4 Tax=Gammaproteobacteria... 516 e-145 UniRef50_B7LMM6 Putative uncharacterized protein n=3 Tax=Enterob... 514 e-144 UniRef50_A4VFG3 GGDEF domain protein n=5 Tax=Proteobacteria RepI... 512 e-143 UniRef50_B5Y2I5 Diguanylate cyclase n=6 Tax=Enterobacteriaceae R... 510 e-143 UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 504 e-141 UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 500 e-140 UniRef50_D0SV00 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 495 e-138 UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthrop... 493 e-138 UniRef50_C6RKE1 Diguanylate cyclase n=2 Tax=Acinetobacter radior... 483 e-135 UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter di... 466 e-129 UniRef50_B6JHB4 Putative ggdef family protein n=1 Tax=Oligotroph... 451 e-125 UniRef50_B8KHV5 Ggdef domain protein n=1 Tax=gamma proteobacteri... 434 e-120 UniRef50_A0L865 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 421 e-116 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 279 1e-73 UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium... 271 3e-71 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 268 2e-70 UniRef50_B9M9A9 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32... 265 2e-69 UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 265 4e-69 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 265 4e-69 UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 264 4e-69 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 263 9e-69 UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 263 1e-68 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 261 4e-68 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 260 6e-68 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 260 6e-68 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 260 6e-68 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 260 7e-68 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 259 2e-67 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 259 2e-67 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 258 3e-67 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 258 4e-67 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 258 4e-67 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 258 4e-67 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 257 5e-67 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 257 6e-67 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 256 1e-66 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 256 2e-66 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 256 2e-66 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 255 2e-66 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 255 2e-66 UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydroge... 255 3e-66 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 255 3e-66 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 254 4e-66 UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG8... 254 4e-66 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 254 4e-66 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 254 5e-66 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 5e-66 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 5e-66 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 254 5e-66 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 5e-66 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 254 5e-66 UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 254 6e-66 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 254 6e-66 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 253 9e-66 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 253 1e-65 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 253 1e-65 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 253 1e-65 UniRef50_C9YCE2 Putative uncharacterized protein n=1 Tax=Curviba... 253 1e-65 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 252 3e-65 UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria ... 252 3e-65 UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 252 3e-65 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 252 3e-65 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 251 3e-65 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 251 3e-65 UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinog... 251 4e-65 UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 4e-65 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 251 4e-65 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 251 4e-65 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 4e-65 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 251 5e-65 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 251 5e-65 UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepI... 250 7e-65 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 250 7e-65 UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (... 250 7e-65 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 250 9e-65 UniRef50_A1K902 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 250 9e-65 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 250 1e-64 UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepI... 250 1e-64 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 250 1e-64 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 250 1e-64 UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 250 1e-64 UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=... 250 1e-64 UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acid... 250 1e-64 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 2e-64 UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4... 249 2e-64 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 249 2e-64 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 249 2e-64 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 249 2e-64 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 248 3e-64 UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquific... 248 3e-64 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 248 3e-64 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 248 3e-64 UniRef50_B9L6Y1 Diguanylate cyclase n=1 Tax=Nautilia profundicol... 248 3e-64 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 248 3e-64 UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 248 4e-64 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 248 4e-64 UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomac... 248 5e-64 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 247 5e-64 UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas camp... 247 5e-64 UniRef50_C6C1P7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 247 5e-64 UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas Rep... 247 5e-64 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 247 5e-64 UniRef50_B9L5N3 Ggdef domain protein n=1 Tax=Nautilia profundico... 247 6e-64 UniRef50_A1AK83 Response regulator receiver modulated diguanylat... 247 6e-64 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 247 7e-64 UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=... 247 7e-64 UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfoc... 247 8e-64 UniRef50_A1HRZ7 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 247 8e-64 UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 247 9e-64 UniRef50_Q2JCX5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Frank... 247 9e-64 UniRef50_A5IF46 Sensor histidine kinase n=5 Tax=Bacteria RepID=A... 246 1e-63 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 246 1e-63 UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 246 1e-63 UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 246 1e-63 UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 246 1e-63 UniRef50_C6XL77 Response regulator receiver modulated diguanylat... 246 1e-63 UniRef50_B6BJ77 Signal transduction response regulator-chey like... 246 1e-63 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 246 1e-63 UniRef50_C0QPI4 Response regulator n=1 Tax=Persephonella marina ... 246 2e-63 UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=De... 246 2e-63 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 245 2e-63 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 245 2e-63 UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 R... 245 2e-63 UniRef50_C1XM61 Diguanylate cyclase (GGDEF) domain-containing pr... 245 2e-63 UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydroge... 245 2e-63 UniRef50_B4U722 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp.... 245 2e-63 UniRef50_A3DDM3 Diguanylate cyclase n=3 Tax=Clostridium thermoce... 245 3e-63 UniRef50_C0QHN1 Putative diguanylate cyclase (GGDEF domain prote... 245 3e-63 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 245 3e-63 UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 245 3e-63 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 245 3e-63 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 245 3e-63 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 245 3e-63 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 245 4e-63 UniRef50_C5T761 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 244 4e-63 UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 244 4e-63 UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 244 4e-63 UniRef50_B5YAI6 Ggdef domain n=2 Tax=Dictyoglomus RepID=B5YAI6_D... 244 4e-63 UniRef50_Q30WR5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desul... 244 5e-63 UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilu... 244 5e-63 UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfo... 244 5e-63 UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 244 6e-63 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 244 6e-63 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 244 6e-63 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 243 7e-63 UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydroge... 243 7e-63 UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC... 243 7e-63 UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n... 243 8e-63 UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelo... 243 8e-63 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 243 1e-62 UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 243 1e-62 UniRef50_A6Q482 Putative uncharacterized protein n=1 Tax=Nitrati... 243 1e-62 UniRef50_Q2W7A4 Response regulator n=4 Tax=Proteobacteria RepID=... 243 1e-62 UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 243 1e-62 UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 242 2e-62 UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Hermini... 242 2e-62 UniRef50_C1DVZ5 Ggdef domain protein n=1 Tax=Sulfurihydrogenibiu... 242 2e-62 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 242 2e-62 UniRef50_C0N947 GGDEF domain protein n=1 Tax=Methylophaga thioox... 242 2e-62 UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turn... 242 2e-62 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 242 2e-62 UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 242 2e-62 UniRef50_Q30QH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 242 2e-62 UniRef50_C1DCC5 GGDEF domain protein n=1 Tax=Laribacter hongkong... 242 2e-62 UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 242 3e-62 UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing pr... 242 3e-62 UniRef50_C6MLU9 Response regulator receiver modulated diguanylat... 242 3e-62 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 242 3e-62 UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Rals... 242 3e-62 UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus... 241 3e-62 UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thala... 241 4e-62 UniRef50_B8FIY6 Periplasmic/7TM domain sensor diguanylate cyclas... 241 4e-62 UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgar... 241 4e-62 UniRef50_Q1NSC4 GGDEF:GAF n=2 Tax=delta proteobacterium MLMS-1 R... 241 4e-62 UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocy... 241 4e-62 UniRef50_Q47HY8 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 241 4e-62 UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulo... 241 5e-62 UniRef50_B9QXQ9 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 241 5e-62 UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax... 241 5e-62 Sequences not found previously or not previously below threshold: UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 261 4e-68 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 257 5e-67 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 257 5e-67 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 257 8e-67 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 255 2e-66 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 1e-65 UniRef50_B7K273 Response regulator receiver modulated diguanylat... 251 4e-65 UniRef50_Q6AMZ3 Putative uncharacterized protein n=1 Tax=Desulfo... 250 7e-65 UniRef50_B0TV39 Diguanylate cyclase n=1 Tax=Shewanella halifaxen... 250 9e-65 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 250 1e-64 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 250 1e-64 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 250 1e-64 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 249 1e-64 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 248 3e-64 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 248 3e-64 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 248 4e-64 UniRef50_C1SIQ7 Diguanylate cyclase (GGDEF) domain-containing pr... 248 4e-64 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 248 4e-64 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 247 5e-64 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 247 9e-64 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 247 1e-63 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 246 1e-63 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 245 2e-63 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 245 2e-63 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 2e-63 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 245 2e-63 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 245 2e-63 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 245 2e-63 UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clos... 245 2e-63 UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomona... 245 3e-63 UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 245 3e-63 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 3e-63 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 245 4e-63 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 244 5e-63 UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 244 6e-63 UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax... 244 6e-63 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 244 6e-63 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 243 7e-63 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 243 8e-63 UniRef50_Q1N5E1 GGDEF domain protein n=1 Tax=Bermanella marisrub... 243 9e-63 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 243 9e-63 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 243 1e-62 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 243 1e-62 UniRef50_A7BV03 Sensor protein n=2 Tax=Beggiatoa sp. PS RepID=A7... 243 1e-62 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 243 1e-62 UniRef50_Q1MZ89 Response regulator containing a CheY-like receiv... 243 1e-62 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 243 1e-62 UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 243 1e-62 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 243 1e-62 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 242 2e-62 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 242 2e-62 UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvest... 242 2e-62 UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 242 2e-62 UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiv... 242 2e-62 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 242 2e-62 UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 242 2e-62 UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 242 2e-62 UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desu... 242 3e-62 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 242 3e-62 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 242 3e-62 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 242 3e-62 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 242 3e-62 UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodo... 242 3e-62 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 241 3e-62 UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 241 3e-62 UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 241 4e-62 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 241 5e-62 >UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteriaceae RepID=YDDV_SHIBS Length = 460 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 459/460 (99%), Positives = 459/460 (99%) Query: 1 MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ 60 MEMYFKRMKDEWTGLVEQADP IRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ Sbjct: 1 MEMYFKRMKDEWTGLVEQADPLIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ 60 Query: 61 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY Sbjct: 61 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 Query: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE Sbjct: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 Query: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR Sbjct: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL Sbjct: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF Sbjct: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI Sbjct: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL Sbjct: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 >UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteriaceae RepID=D2TII3_CITRO Length = 460 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 378/459 (82%), Positives = 419/459 (91%) Query: 1 MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ 60 MEMY KRMKDEW LVEQ DP IR A+EIA HAH LSIEFYRIV DPHAEEFLSNEQ Sbjct: 1 MEMYLKRMKDEWVTLVEQTDPQIRRLASEIATRHAHDLSIEFYRIVLADPHAEEFLSNEQ 60 Query: 61 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 VERQLK A+E+WI++VLS+ V+DVERLI++QHTVAEVHARIGIPVE+VEMGFRVLKK+LY Sbjct: 61 VERQLKHALEKWIVDVLSSGVEDVERLIKVQHTVAEVHARIGIPVELVEMGFRVLKKLLY 120 Query: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 P+I + A +KL +YHFSINSID+AMEVM+RAF+FS+SSA+KEDENYRIFSLLENAEE Sbjct: 121 PIIIDGHHDANDKLLIYHFSINSIDLAMEVMSRAFSFSESSAAKEDENYRIFSLLENAEE 180 Query: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 EKERQIAS+LSWE+DIIYKI+LD+D G+SLPLSQADFGLWFNHKGRHYFSGIAEVGHISR Sbjct: 181 EKERQIASLLSWEMDIIYKIMLDADFGNSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 LIQDFDG+F Q+ + L+N++ RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL Sbjct: 241 LIQDFDGLFLQSRETAKALSNKAARVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 TKLLNRRFLPTIFKREIAHANR GTPLS+LIIDVDKFKEINDTWGHNTGDEILR+VSQAF Sbjct: 301 TKLLNRRFLPTIFKREIAHANRAGTPLSILIIDVDKFKEINDTWGHNTGDEILRRVSQAF 360 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 YDNVRSSDYVFRYGGDEFIIVLTEA++ +TLR AERIR RVEKTK+K+ +G I LSLSI Sbjct: 361 YDNVRSSDYVFRYGGDEFIIVLTEATQADTLRIAERIRLRVEKTKIKSPDGATIPLSLSI 420 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 GAAMFNGHPDYERLIQIADEALY AKR+GRNRVELW + Sbjct: 421 GAAMFNGHPDYERLIQIADEALYTAKRQGRNRVELWSPA 459 >UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID=C6D9C2_PECCP Length = 471 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 184/454 (40%), Positives = 274/454 (60%), Gaps = 2/454 (0%) Query: 4 YFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVER 63 Y + + EWT L+ I+ A + +FY + D A FLS++QV Sbjct: 18 YNQVITSEWTQLIATTSQKSFNLLRAISEQKASDFADKFYSYMLKDQEASLFLSSQQVHD 77 Query: 64 QLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVI 123 +L +M +WI ++L+ + + LI Q + ++HARIGIPV++VE G R LK LY I Sbjct: 78 RLHGSMSKWIADILTNTGEHLVDLINHQKKIGQIHARIGIPVDLVERGARRLKWHLYEDI 137 Query: 124 FSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKE 183 A F+ S+DIA+E+M++ ++ S A+K +E+YR+FS+LENA E+E Sbjct: 138 AQVAEDKALCFDAMRFASISMDIAIEIMSKTYSQSHDLAAKNEESYRLFSILENASMERE 197 Query: 184 RQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQ 243 RQ AS+L+WE I+ + + L S LS ++FGLWFNHKG+ FS I + I+ +I Sbjct: 198 RQNASLLNWENAFIFSVATGTPLSSIQDLSDSEFGLWFNHKGKSSFSNIQGIRTIASIIT 257 Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKL 303 + D +T L + L +R+ + +I LL LF+EV + E G D LT L Sbjct: 258 ETDEYIRG--YSTTALLTQQDYAPLLKAVRSKIYKINMLLGSLFDEVQKLESGKDTLTLL 315 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 LNRRFLPTI + EI+ A + TPLS+ +ID+D FK +NDT+GH GD IL+++++ Y++ Sbjct: 316 LNRRFLPTILRHEISLAMHSSTPLSIAMIDIDHFKTVNDTYGHAAGDNILKRIAEVLYES 375 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 R+SDYVFRYGG+EF+IVL E + ER+R +++ + NGE I +++S G A Sbjct: 376 TRNSDYVFRYGGEEFMIVLIETPKVAAHTIIERLRKKIQDHPIHLQNGESITMTISAGIA 435 Query: 424 MFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 +++GHPDYE LI+ AD+ALY AK GRNR+E + Sbjct: 436 VYSGHPDYECLIKAADDALYQAKANGRNRIEYAQ 469 >UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3V9_9PROT Length = 456 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 148/449 (32%), Positives = 249/449 (55%), Gaps = 3/449 (0%) Query: 9 KDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSA 68 +W L +Q + + +A L+ +FY + D A F+S++ V ++L ++ Sbjct: 11 AADWQQLHQQVPESTKKLICDTVDRYAGDLATQFYDYMLADKEANPFISHDIVSQRLHAS 70 Query: 69 MERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDY 128 M+ W+ + S Q D + + + Q V VHARI +P+ +V G R+LK+ + + ++ Sbjct: 71 MQGWLRELFSVQQHDPKEIYKYQCHVGVVHARIQMPISLVLRGSRLLKQAITEHLVETEL 130 Query: 129 SAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIAS 188 A+ +Q F ++++M MT ++ + + + DE+YR+F+L +N E+ERQ A+ Sbjct: 131 DRAKLVQATRFVSEVMELSMSAMTDSYVINVGKSVRTDESYRMFALGQNMLAERERQRAA 190 Query: 189 ILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGI 248 + W I+ +L D G + ++FGLW HK F E+ I ++ + Sbjct: 191 LSEWAQHILLHLLGDEGTGVP-EMKHSEFGLWLQHKASIIFHDAPELERIRVCVEKLERT 249 Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRF 308 + R N + + Q+ + ++ LL LF+ E G D LT+LLNRR+ Sbjct: 250 LLPGLIEKRR--NGGNAREAMRQVEADIGEVKFLLTGLFDRFIEVESGRDSLTRLLNRRY 307 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 LPTI RE+A A + P ++L++D+D FK INDT GH++GD +L++ S +VR D Sbjct: 308 LPTILMRELALARNSDVPFAILLLDIDHFKNINDTHGHDSGDMVLQQASDLVTSSVRVGD 367 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH 428 ++FRYGG+E ++VL E ++ L+ AE IR R ++ +G+ + +++SIG A +NGH Sbjct: 368 FIFRYGGEELLVVLVEIGRDQALQVAETIRERFAAEPMRVGDGKVMQVTVSIGVAAYNGH 427 Query: 429 PDYERLIQIADEALYIAKRRGRNRVELWK 457 PDYER+++ AD+ALY AK GRNR EL Sbjct: 428 PDYERIVKDADDALYRAKNSGRNRCELAD 456 >UniRef50_C1DFY2 GGDEF domain protein n=4 Tax=Gammaproteobacteria RepID=C1DFY2_AZOVD Length = 464 Score = 516 bits (1330), Expect = e-145, Method: Composition-based stats. Identities = 159/451 (35%), Positives = 257/451 (56%), Gaps = 2/451 (0%) Query: 9 KDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSA 68 EW L+ Q P+ A+ E+A H L FY + D A FL++EQV+ +L Sbjct: 10 AAEWKLLLGQFPAPVVAQIRELATTHQSELPGYFYEQMLQDEQAMLFLTHEQVKSRLHGT 69 Query: 69 MERWIINVLSAQVDD--VERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSS 126 + +WI++V S DD ++ LI Q + E+HARI IP+ +V G R L++ L+ ++ Sbjct: 70 LRQWIVSVFSMSDDDAALQALIAQQKQIGEIHARIKIPIHLVLRGARHLRERLFVLLRQR 129 Query: 127 DYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQI 186 KL ++D+AME+M+RAF+ + S+ +E YR+FS+ +N E+ERQ Sbjct: 130 PLDPEHKLFGQRLISETVDLAMEIMSRAFSDAYDRNSRSEEGYRLFSVAQNIGIEQERQR 189 Query: 187 ASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFD 246 +++L WE +++ + + LS ++FGLWF HKG H F G E I ++ D Sbjct: 190 SALLDWENHLMFDLAVGQLATQLPRLSNSEFGLWFRHKGAHAFQGSRETELILEGMRQID 249 Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 + + R++ L +R II L LFE+ + E G DVLT +LNR Sbjct: 250 EVLLPLFGQPAAGADADQRLQNLRLLREQTKGIIFHLDNLFEQANVLESGRDVLTHMLNR 309 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 +FLP I +E+A+A + +VL +D+D+FK IND +GH GD +L++++ ++ R Sbjct: 310 KFLPVILAKEVAYARQNERSFAVLAVDIDRFKHINDEFGHEAGDVVLQQLASLLSNHCRG 369 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 DYVFR GG+EF+++L + ++ L AE++R + + + + +D+ L++SIG A+ + Sbjct: 370 GDYVFRMGGEEFLVLLVDVTQAHALGVAEKLRQQAAQERFRLPGEQDLQLTVSIGVALHD 429 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRVELWK 457 GHPDY+ L++ AD ALY AK GRN+V L + Sbjct: 430 GHPDYQHLLRQADRALYEAKHGGRNQVVLAR 460 >UniRef50_B7LMM6 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B7LMM6_ESCF3 Length = 472 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 163/454 (35%), Positives = 264/454 (58%), Gaps = 2/454 (0%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKS 67 + EW L+ Q ++ H+L FY + + FL+ EQV +L S Sbjct: 17 LFTEWQTLINQTPVAAHELLLSLSDKELHHLVTIFYDYMLSHTESALFLNTEQVNSRLSS 76 Query: 68 AMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD 127 +M W+ VL + D+ L+ QH + VHARIG+P+++V R +K+ LY ++ Sbjct: 77 SMFHWLRAVLGSSQQDLHELLAKQHEIGIVHARIGLPIDLVARAARKIKEELYQILALRK 136 Query: 128 YSAAEKL-QVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQI 186 +AA + FS +ID A+E MT +++ S ++ +E YR+ ++ ++ E+ERQI Sbjct: 137 VAAAHIITDAICFSGLAIDTAIEAMTASYSPSVQNSVNAEEQYRLLTIYDDINVERERQI 196 Query: 187 ASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFD 246 S+ WE IY I + + LS+++FG+WF HKG+H + + L++ D Sbjct: 197 RSLTDWENQFIYNIATGLPIKDLVFLSKSEFGMWFAHKGKHILGKSVLLSGMETLMKKID 256 Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 Q + L R+K L +IR +QI LL +FE++ + E G D LT+LLNR Sbjct: 257 HHLKQELPLHAQLTT-DERLKLLQEIRQLTAQIHILLSSMFEDLVKEENGKDSLTQLLNR 315 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 RF+PTI +REI+ A + P ++ ++D+D FK+IND +GHN GD L+ VS Y+++RS Sbjct: 316 RFIPTIMRREISIALHSRKPFALAMLDIDYFKQINDRYGHNAGDNTLKNVSAMIYEHIRS 375 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 SDYVFRYGG+EF+I+L E ++ E +R+++ +++A+ E ++++SIG A ++ Sbjct: 376 SDYVFRYGGEEFMILLVETELSQAKIILENLRNKMAGLRIQASASESFSVTVSIGVAEYD 435 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 HPDY+ LI+ AD ALY AK +GRNRVE+++ + Sbjct: 436 YHPDYKLLIEKADSALYYAKSQGRNRVEVFQPHM 469 >UniRef50_A4VFG3 GGDEF domain protein n=5 Tax=Proteobacteria RepID=A4VFG3_PSEU5 Length = 456 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 167/455 (36%), Positives = 263/455 (57%), Gaps = 5/455 (1%) Query: 5 FKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQ 64 ++ EW L++ A + + L+ FY + DPH+ FLS++QV+ + Sbjct: 6 NHQLVAEWLRLLDGYPAEAAAALQAVTAEKSQELAEHFYSQMLADPHSASFLSHDQVKNR 65 Query: 65 LKSAMERWIINVLSAQVD-DVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVI 123 L +M++WI+ V S+ D+ +I +Q V ++HARI IPV +V G R LK L ++ Sbjct: 66 LGKSMQKWIVTVCSSTAHSDLNAVIDLQRKVGDIHARIEIPVSLVLRGSRSLKGRLRQLL 125 Query: 124 FSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKE 183 + + + + + ID+A+E++ A++ S S+ +E YR+FS+ +N EKE Sbjct: 126 EQRELAEPIRRKAARMGADLIDLAVEIICFAYSQSHDRNSRAEEAYRLFSVSQNIGVEKE 185 Query: 184 RQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQ 243 RQ A++L WE +++ + + + G+ L+ ++FGLWF HK H F G E I I Sbjct: 186 RQRAALLDWENQLMFDLAIGNLTGTLPQLAGSEFGLWFRHKASHAFQGSPESASILEYIT 245 Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKL 303 D + ++ L++ + R+ L QIR I LL LFE+ + E G DVLT+L Sbjct: 246 QID----EELKAIATLDDAAGRLGKLHQIREQTRSIKFLLDSLFEQANDLEAGRDVLTRL 301 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 LNR+FLP + +E+ +A ++ VL IDVD FK INDT GH+ GD+IL++V N Sbjct: 302 LNRKFLPVVMAKEVLYARQSNNTFGVLAIDVDHFKRINDTHGHDAGDQILQQVGALLASN 361 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 R DY FR GG+EF++VL + N+ L AE++R R+ + + ++GE + +++SIG A Sbjct: 362 TRGGDYAFRLGGEEFLLVLVDIDTNKALAAAEKLRERIAREHFRLSSGEVLQVTVSIGMA 421 Query: 424 MFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 + +GHPDYERL+Q AD+ALY AK GRNR L+ Sbjct: 422 VHDGHPDYERLLQQADQALYQAKHGGRNRCVLYAG 456 >UniRef50_B5Y2I5 Diguanylate cyclase n=6 Tax=Enterobacteriaceae RepID=B5Y2I5_KLEP3 Length = 464 Score = 510 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 168/463 (36%), Positives = 259/463 (55%), Gaps = 10/463 (2%) Query: 2 EMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQV 61 + Y + EW L + P +RA ++A + L+ FY + DP LS E V Sbjct: 6 QKYIAVIFKEWLPLYDSLTPDVRALLKKMADERSSMLATRFYDFIFQDPDIARHLSYELV 65 Query: 62 ERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYP 121 E +L ++ W+ +L+ + +D++ L + Q+ + +H+RIGIP E V G R +K L Sbjct: 66 EERLSRSLAGWVQQILTCEKEDLQALAERQYQIGSIHSRIGIPAEAVLRGARQIKSGLVE 125 Query: 122 VIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEE 181 I S + + H++I ++++A+E+M A+T S A+K +E +R++SL++N E Sbjct: 126 AIRDSQVARDTGIAAIHYAIMAMNMAVEMMCHAYTLSHYRATKNEEAFRLYSLMDNVPME 185 Query: 182 KERQIASILSWEIDIIYKILLD--SDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHIS 239 +Q AS+ WE I+ I+ + +DL ++L LS+++FGLWF HK YF+ ++G I+ Sbjct: 186 YGKQQASLSGWENSAIFNIVSENRTDLNATL-LSESEFGLWFRHKCVRYFNHNPQMGEIT 244 Query: 240 RLIQDFDGIFNQ---TMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVG 296 LI D + + ++ N +SL L +I I + L LF +S+ + G Sbjct: 245 ELIGQVDALITEWRTAEQDAGYKNTQSL----LQKIHIHCQHISSQLGVLFSSLSQMQNG 300 Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 D LT LLNRR+LP + K E+ A PL+V IID+D FKEIND WGH GD ++ V Sbjct: 301 KDALTSLLNRRYLPVVLKHEVTLAIEYDLPLTVAIIDIDFFKEINDKWGHMVGDRAIKHV 360 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 + DN+RSSDY+FRYGG+EF++VL E E ER+R ++ + I + Sbjct: 361 ADLLSDNIRSSDYLFRYGGEEFLLVLVETRAAEAFPLLERLRKKIGQLAFNVGGDTQIPI 420 Query: 417 SLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + SIG A GHPDY L++ AD ALY AKR GRN V++ K Sbjct: 421 TASIGFAAHTGHPDYNLLLRDADNALYAAKREGRNCVKMHKGG 463 >UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SPL2_STRM5 Length = 471 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 172/453 (37%), Positives = 257/453 (56%), Gaps = 5/453 (1%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKS 67 + + W + QA P A A L+ FY ++ D A FLS++QV+++L+ Sbjct: 13 LAEAWQQCLLQAGPAATALLHAAAADAPPALAQRFYEVLLQDTRARRFLSHDQVKQRLQP 72 Query: 68 AMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD 127 AM+RW+ +L+ + + Q + +VHAR+GIPV++V G RVLK L+ + Sbjct: 73 AMQRWLAQLLTTDASGIANTVASQRIIGDVHARVGIPVDLVTRGARVLKHELFVRLRDDA 132 Query: 128 YSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIA 187 + +DIAME MT A+T + +++ D YR+FSL++N E+ERQ A Sbjct: 133 PDSDTAFAAIDCLSAIMDIAMEGMTLAYTHARERSTRADAAYRLFSLVQNVGTERERQRA 192 Query: 188 SILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDG 247 +L WE ++Y + + L+ ++FGLWF HKG F +E + +L+ DG Sbjct: 193 LLLDWENALLYALAGHVQASDNASLATSEFGLWFTHKGIPSFGESSETQQVGQLMARIDG 252 Query: 248 IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRR 307 + + + R+ L IR ++ I TL+ LFE + + G D LT LLNRR Sbjct: 253 HLQRASGDA-----PAQRLAVLPAIREDLAAIRTLMTLLFERIGELDAGSDALTNLLNRR 307 Query: 308 FLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS 367 FLPT+ +REI A R TP S+L++D+D FK IND GH+ GD L+ V+ R S Sbjct: 308 FLPTVLRREIELATRNRTPFSLLLLDLDHFKAINDGHGHDAGDRALQHVAGVLGQLTRGS 367 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG 427 DY+FRYGG+EF++VL ASE++ AE +R ++ K+ + ANG+ ++L+ SIG A +G Sbjct: 368 DYLFRYGGEEFVVVLVAASESQAAVIAESLRRQIAKSPVPLANGQVLSLTASIGVAGHDG 427 Query: 428 HPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 HPDYERL+ AD A+Y AKR GRNRV + A L Sbjct: 428 HPDYERLMARADAAMYEAKRSGRNRVVVASADL 460 >UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KC37_AZOSB Length = 475 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 160/455 (35%), Positives = 250/455 (54%), Gaps = 4/455 (0%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKS 67 ++ +W L + P +R ++ + H ++ FY + D A FLS+E V ++L+ Sbjct: 22 IESDWLKLFDAVSPSLREAVRDVVLEHRAAMADAFYARMMADGDARPFLSHEAVHQRLRF 81 Query: 68 AMERWIINVLSAQVDDVERLIQ-IQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSS 126 +M+RW+ + S +Q V EVH+R+ +PV +V G RVLK + + +S Sbjct: 82 SMQRWMETLFSCADHAAFAAAMALQRHVGEVHSRVDLPVNLVARGARVLKGEIAARLPAS 141 Query: 127 DYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQI 186 A +Q + N ID+A EVM+ A+ S A++ DE YR+FS +N E+ERQ Sbjct: 142 GLDRAALVQAVLYVDNLIDLAFEVMSSAYVASHERATRIDEAYRVFSYGQNMSLERERQR 201 Query: 187 ASILSWEIDIIYKILLDSDLGSSLPL-SQADFGLWFNHKGRHYFSGIAEVGHISRLIQDF 245 AS+L WE + + ++ G LPL S + FGLW HK F G AE+ I ++ Sbjct: 202 ASLLDWENRFL-QAMMAGQSGDELPLISDSAFGLWLQHKAVAVFEGSAELPSIREGMRRL 260 Query: 246 DG-IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLL 304 D + + +L+ R + + +++ + Q+ L+ +FE E G D LT+LL Sbjct: 261 DRDLIPLCRQQMESLDERGESRRLIKAVQSELGQLKFLIGAMFERFVDLESGKDALTQLL 320 Query: 305 NRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV 364 NRRFLP I RE A ++L++DVD FK+IND GH+ GD +L++++ + V Sbjct: 321 NRRFLPAILTRETEIARNQHKSFALLLVDVDHFKQINDVHGHDAGDRVLQQIASLLLNTV 380 Query: 365 RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAM 424 RS D+VFRYGG+EF+++L E R AE+IR RV++ + + ++ S+G A+ Sbjct: 381 RSGDFVFRYGGEEFLVLLVEVDRQHAARVAEKIRQRVQQETFLLPDSRQLQVTASVGVAL 440 Query: 425 FNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 +GHPDY+RLI AD+ALY AK GRNR E + Sbjct: 441 HDGHPDYQRLINQADDALYRAKTGGRNRCEFATDA 475 >UniRef50_D0SV00 Predicted protein n=2 Tax=Acinetobacter RepID=D0SV00_ACILW Length = 465 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 145/459 (31%), Positives = 252/459 (54%), Gaps = 7/459 (1%) Query: 3 MYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVE 62 R+ ++W + + A H+ L EFY+ + I+ + EF S++ ++ Sbjct: 4 ECMARLAEQWEQICQNYSSDDLLHAFHFIQDHSLILVEEFYKNMLIEKESAEFFSDDLIQ 63 Query: 63 RQLKSAMERWIINVLSAQVDD-VERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYP 121 ++L+ + W++ ++ +Q Q V VHAR+GIP ++ G R +++ ++ Sbjct: 64 QRLRDTLNAWLLESFGVGINKRYADAVQKQAMVGHVHARVGIPSWLIMRGVREIERKMFE 123 Query: 122 VIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEE 181 ++ + + + L + + + A EVM R++ + + +YR+FS +++ + Sbjct: 124 LLDENPHHSM--LTTCSYIVQIMGFATEVMCRSYEAKTAMNQEIKHSYRVFSAMQDVAVQ 181 Query: 182 KERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRL 241 K++Q +S+L WE ++++K+ + + + LS+++FGLWF HK + F+G +V I Sbjct: 182 KDKQRSSLLDWENELMFKVFSEHEKLNHPMLSKSEFGLWFIHKASYAFTGSDQVDLIIER 241 Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 I D NQ + + + NN + + +IR+ +I L+ +LF+ E G D LT Sbjct: 242 IYQVDE-LNQDIMDCTDKNNM---LGLIQRIRDLNREIQLLVDQLFQVAEYIESGNDSLT 297 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 +LLNRR+L TI REI + + TPLS+L ID D FK IND +GH GD L+ +++A Sbjct: 298 QLLNRRYLNTIISREITFSRKNHTPLSLLAIDADYFKSINDKFGHAAGDLALKFLAEALQ 357 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 + SDY FR GG+EF+++L + E L AE IR +E + +A G+ ++SIG Sbjct: 358 KYSQGSDYAFRVGGEEFLLLLVDTDEKRALNIAESIRKYIENGMINSAQGQQFKFTVSIG 417 Query: 422 AAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 +++GHPDY+R + AD ALY+AK GRNRV + SL Sbjct: 418 CVLYDGHPDYQRFLNAADSALYMAKNNGRNRVYMAHQSL 456 >UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X556_OCHA4 Length = 473 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 159/444 (35%), Positives = 246/444 (55%), Gaps = 2/444 (0%) Query: 11 EWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAME 70 EW LV ++ H FY + + A FLS + V+ +L +++ Sbjct: 24 EWVELVSGLPEEHALFLRDLIDRHREQFVGVFYNRLMNNRDAATFLSQKMVQERLHNSLS 83 Query: 71 RWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDYSA 130 W++ + DDVE I+ Q V EVHARI +P+ +V G R+LK + + S Sbjct: 84 DWLLKMFQRTADDVEAFIREQRKVGEVHARIDVPIHVVMQGARLLKNEIVRQLKLETASR 143 Query: 131 AEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASIL 190 ++ N+IDIA+E+M++AF +++ DE YR F+L + E+E Q A+++ Sbjct: 144 EVLARLIVHVSNAIDIAIEIMSQAFVKDARESAQTDEAYRAFTLSHDFPLERESQRAALM 203 Query: 191 SWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFN 250 W +++ + +SD L+ +DFGLW HK FS + +I R ++ D + Sbjct: 204 EWSQSLLFNLYGNSD-SPLHSLASSDFGLWLQHKADLMFSNSGTLENIRRNVEHIDNVLL 262 Query: 251 QTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLP 310 + + R N L L + + ++ LL ELF+ + E G D LT+ LNRRF+P Sbjct: 263 PAINSARKDNPAGLAASLAL-FQTKIGEVKFLLSELFQAAAAMETGRDPLTRALNRRFMP 321 Query: 311 TIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYV 370 +I RE+ A++ LSVL+ID+D FK INDT+GH++GD +L++V++A R SD+V Sbjct: 322 SILTREVRMASQKAMDLSVLMIDIDHFKNINDTYGHSSGDAVLQQVAEAILSLCRPSDFV 381 Query: 371 FRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD 430 FRYGG+EF++ L EA EN+ AE +R ++ + L +G +++LSIG A FNGHPD Sbjct: 382 FRYGGEEFLVALVEADENKAFTIAEELRKQIAQQPLNLPDGARQSVTLSIGVAAFNGHPD 441 Query: 431 YERLIQIADEALYIAKRRGRNRVE 454 Y L+ AD ALY AK+ GRNR E Sbjct: 442 YSHLVNAADRALYRAKQAGRNRCE 465 >UniRef50_C6RKE1 Diguanylate cyclase n=2 Tax=Acinetobacter radioresistens RepID=C6RKE1_ACIRA Length = 452 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 144/453 (31%), Positives = 253/453 (55%), Gaps = 7/453 (1%) Query: 2 EMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQV 61 E + ++W + Q A+ ++ L EFY+ + + A FLS+E V Sbjct: 3 EQCITMLAEQWKDICGQYSATDLNYTAQFIQDNSFLLVDEFYKNMMQEKEASYFLSDEIV 62 Query: 62 ERQLKSAMERWIINVLSAQ-VDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 + +LK+ + +W+++ + + E ++Q Q + VHARIGIP ++ G R ++K ++ Sbjct: 63 QSRLKTTLNQWLLDCFNMPFKQNYEEVVQRQLVIGNVHARIGIPSWLIMRGIREIEKKVF 122 Query: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 + + + V ++ + SI A E+M R++ + + YR+FS +++ Sbjct: 123 SL--QASRTQQNIYAVTNYIVQSIGFASEIMCRSYEANIEINNDIKHTYRLFSAMQDVSI 180 Query: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 +K++Q +S+L WE ++++K+ DS + L LS+++FGLWF HK + FSG +V I Sbjct: 181 QKDKQRSSLLDWENELMFKVFSDSASFNHLLLSKSEFGLWFIHKAAYAFSGTDQVQIIID 240 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 I + D + + + +++ + + +IR +I L+ +LF+ G D L Sbjct: 241 RIYEVDKLNLAVLES----QDKANAIALIQRIREKNREIQHLVDQLFQVSEYIGSGNDSL 296 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 T+LLNRR+L TI REI + + G+PL++L ID D FK IND +GH GD L+ +++ Sbjct: 297 TQLLNRRYLNTIINREINFSRKNGSPLTLLAIDADHFKGINDKFGHAAGDLALQFLAEVL 356 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 + + SDY FR GG+EF+++L ++ + AE IR R+E+T +++ G ++S+ Sbjct: 357 LECTKGSDYAFRIGGEEFLLLLVDSDLSRAQSVAENIRMRIEETVIRSTMGVSFNFTVSV 416 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 GA +++GHPDY+R + AD ALY AK GRN V Sbjct: 417 GAVLYDGHPDYQRFLDAADSALYAAKNNGRNNV 449 >UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCI9_GLUDA Length = 472 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 131/449 (29%), Positives = 229/449 (51%), Gaps = 12/449 (2%) Query: 16 VEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIIN 75 R ++ L FY P + +L++ + +L+ + W+ Sbjct: 17 FTNVPDATRLLVHDVVERLTPALVAAFYDHFTSHPEGQTYLTDPETTERLRGTLMVWMAE 76 Query: 76 VLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQ 135 + SA +R+ Q + HAR IP+ +V G ++++ + + + + E Sbjct: 77 LFSAAPQHPQRMADSQRHIGRFHARSSIPIHLVSEGVSLVQRTIIHALGHENLTHEELTD 136 Query: 136 VYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEID 195 + N + A VMT + A+ D YR+F+L ++ E E Q A++L W + Sbjct: 137 AVLYVTNVLTAATGVMTFTYWRQRERAASNDVAYRLFALNQDLSREGEGQKAALLGWSYN 196 Query: 196 IIYKILLDSDLGS--SLPLSQADFGLWFNHKGRHYFSGIA----EVGHISRLIQDFDGIF 249 ++ + + ++ L++++FGLW +K F G G I+++ + Sbjct: 197 VLRSLYVAKTPEDLQTMGLARSEFGLWVTYKVGLLFEGTDISALLTGQIAKVDNELLPAI 256 Query: 250 NQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFL 309 + M R+++ L + V++I++ L LF D LT++LNRRFL Sbjct: 257 LEDMAAERDISPA------LAALHAGVTEILSSLEVLFHASRSSNDVEDPLTRVLNRRFL 310 Query: 310 PTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDY 369 P+I E+ A++TG P+SVL +D+D FK INDT+GH GD +L+ +++ + R SD Sbjct: 311 PSIISYELRVAHQTGRPMSVLFLDIDHFKHINDTFGHAAGDSVLQAIARVLEEASRLSDV 370 Query: 370 VFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP 429 +FRYGG+EF++++ + + L AER+R ++E T ++ +G +++SIGAA + GHP Sbjct: 371 IFRYGGEEFLVLMGDTDTEQMLIGAERLRQKIENTPIRLPDGNLHQITVSIGAAQYAGHP 430 Query: 430 DYERLIQIADEALYIAKRRGRNRVELWKA 458 DYE L++ AD ALY AKR GRNR+E+ A Sbjct: 431 DYEELLRAADAALYRAKRNGRNRIEVADA 459 >UniRef50_B6JHB4 Putative ggdef family protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JHB4_OLICO Length = 463 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 121/444 (27%), Positives = 216/444 (48%), Gaps = 5/444 (1%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKS 67 ++ E + +R ++ + + +FY +V P A FL ++ V +L Sbjct: 19 IEAELKEVYRVTPSSVRTTVYDVIRRTSAEFTDQFYDVVINQPGAHFFLDHQLVNERLHR 78 Query: 68 AMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD 127 AM+ W+ ++ + + I+ Q V VHARI +P +V GFR LK+ + + + Sbjct: 79 AMKEWLDDLFKRDGIEAKSFIRRQQQVGWVHARIKVPERLVSRGFRELKRNIIISLRGTR 138 Query: 128 YSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIA 187 S + +F +D+ +VMT A+ + + DE +R+FSL +N E+ERQ A Sbjct: 139 LSREDLSAAIYFVSALLDLGFDVMTCAYIDRSERSVRSDEAFRLFSLGQNLVTERERQRA 198 Query: 188 SILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDG 247 S+ W + + + + + +P+SQ+DFGLW H+ F +E + I++ Sbjct: 199 SLSEWAQSFFFTLQVGTSPLTFVPISQSDFGLWVFHRAILLFDRSSEYERLIDAIKNV-- 256 Query: 248 IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRR 307 + + + R+ +L +I+ + +I +LL LF+ + D LT+LLNR+ Sbjct: 257 ---EQISELVTFSPPQQRIDYLRKIKAAIGEINSLLALLFDNSLEAQGARDTLTQLLNRK 313 Query: 308 FLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS 367 F+ T+ EI + P SVL+I++D+F ++ G GD I+++ +Q +D+ R+S Sbjct: 314 FVNTVISAEITAQKVSTHPFSVLMIEIDRFDQLRSRLGETGGDIIVQRTAQLIFDSTRTS 373 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG 427 D VF G + F++V EA+ + A+ I R T + SLS+G ++G Sbjct: 374 DSVFSMGRETFLVVYVEANLLAAKQLAKFITDRYATTHFSVNGETVLDCSLSVGVVEYDG 433 Query: 428 HPDYERLIQIADEALYIAKRRGRN 451 HPD L+ A L K+ R+ Sbjct: 434 HPDPRELVNRAQRVLLEEKKIKRD 457 >UniRef50_B8KHV5 Ggdef domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHV5_9GAMM Length = 449 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 134/449 (29%), Positives = 220/449 (48%), Gaps = 9/449 (2%) Query: 9 KDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSA 68 K +++ LVE + + ++ FY+ + D A FL + +VE ++ Sbjct: 3 KRDFSNLVENTPSATVDYVSSVLRESCSDIAAIFYQEMLSDSEAAAFLDHNKVESRMFGM 62 Query: 69 MERWIINVL-SAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD 127 E W VL S+ + L I + E HAR+GIP E V G +V+K + S Sbjct: 63 FEAWAAEVLQSSAAIQPKELKAIHLKIGETHARVGIPAEQVIHGTQVVKAFCVKALI-SA 121 Query: 128 YSAAEKLQV---YHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKER 184 + +K Q+ + ++ D + +M +A+ + + R + E ER Sbjct: 122 WDGQDKHQLDDGVLYVMSLFDTCLSIMNKAYLQRTLEDERNAQALRFRLASVDLSVECER 181 Query: 185 QIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQD 244 ++SW D+ Y S+ G + + FG W +HK +F E+ I L+ + Sbjct: 182 MKTELISWSRDMAYDDW-PSNSGKQSSIYASMFGAWLSHKAPLHFGDFPELDRIRGLVAE 240 Query: 245 FDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLL 304 +G + + ++ ++RS +R Q+ L+ EL ++ R D LT L Sbjct: 241 LNGCVERQLSDSFKASDRS---GLFADVRRLTDQVCFLIDELAQKSQREMDSRDPLTSLY 297 Query: 305 NRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV 364 RRFL I KRE A+ G S+L+IDVD FK++NDT+GH GD +L++V++ V Sbjct: 298 GRRFLDGILKRENQIAHSAGDAYSLLMIDVDDFKQVNDTYGHAIGDRVLKQVAKVLTHVV 357 Query: 365 RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAM 424 R +D+ FRYGGDE ++VLT + + R A+ I + + +G I + +SIG A Sbjct: 358 RQTDFAFRYGGDELLVVLTSSDIDAARRKADAILQSIRAAPVNLDDGRVIPIKVSIGVAE 417 Query: 425 FNGHPDYERLIQIADEALYIAKRRGRNRV 453 + GHPDYE +++ ADEA+Y AK G+N+V Sbjct: 418 YRGHPDYETMLKRADEAVYAAKTAGKNQV 446 >UniRef50_A0L865 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L865_MAGSM Length = 453 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 121/453 (26%), Positives = 222/453 (49%), Gaps = 7/453 (1%) Query: 6 KRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQL 65 R + + D ++ + FY + A FL + V+ +L Sbjct: 3 ARDEQRLKDIYLGVDAEKVNFIGDLIKDRLNQTVERFYIELLEVESARFFLDSALVKERL 62 Query: 66 KSAMERWIINVLSAQVDD-VERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIF 124 ++ W+ + S + DD +E++ Q + VHARI IP+ +V G R+L++ + + Sbjct: 63 HGSLTEWLQMLFSHKDDDTLEQMFAFQKNIGNVHARINIPMHLVVEGMRILRREIICFLS 122 Query: 125 SSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAE-EEKE 183 SD + + +D + ++ ++ +S + ++ R+ L +A+ E E Sbjct: 123 ESDIPRQRLVDLVVLVGEVLDHNLSLINESYVRMSASYERNNQALRL-QLSPSAQALECE 181 Query: 184 RQIASILSWEIDIIYKILLDSDLGSSLP-LSQADFGLWFNHKGRHYFSGIAEVGHISRLI 242 R ++ W ++++L + + LP L +A+FGLW HK ++ I + I Sbjct: 182 RLRGTLRGWSNQ-LWRVLGGRGIETELPSLGRAEFGLWMFHKAPLVLPQYEQLHTIQQNI 240 Query: 243 QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTK 302 Q D + + + +LN ++ L + + ++ I L + E + E G D LTK Sbjct: 241 QAMDALLGRQRLSQEHLN--AVSRDTLSAVDDQLNSIELALDMMIEAILAQESGRDPLTK 298 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 + NRRFL ++ K E+ + R L+ D+D FK INDT+GH+ GD +L++ ++ Sbjct: 299 VYNRRFLDSVVKHEMEVSMRHEIRFGFLLCDIDHFKTINDTYGHDAGDAVLQQFAERLSS 358 Query: 363 NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 R +DYVFR+GG+EF+ V + S AE++R +E+ +GE I ++ S G Sbjct: 359 AARVNDYVFRFGGEEFLFVYGDMSPQRLEHLAEKVRHCIEQELFDLPSGEKIHITASFGG 418 Query: 423 AMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 A+ +G+P++ + +++ DEALY AK GRNR + Sbjct: 419 AVHDGNPNFHKTLKLTDEALYEAKHSGRNRCII 451 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 7/194 (3%) Query: 263 SLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 ++ + FLL + S I L++L E R+ D LT L N+ + +REI A R Sbjct: 276 NITLSFLLAVILGFSVYI-FLKDL--EKFRYLSETDRLTGLYNKGKFNEVLQREIQRAKR 332 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 PLS++I D+D FK+INDT+GH GDE+L+ +++ N+R +D+ R+GG+EF+I+ Sbjct: 333 YKRPLSLIIFDIDHFKKINDTYGHKVGDEVLKALAKLIKKNIRKTDFAARWGGEEFVILA 392 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 E + + AE++R VE K +++S+G A E I AD AL Sbjct: 393 PETNVEGAKKLAEKLRQAVETYKFPTVG----KVTISLGVAQLEPDEKPEDFIVRADMAL 448 Query: 443 YIAKRRGRNRVELW 456 Y AK GRNRVE+ Sbjct: 449 YKAKEGGRNRVEIA 462 >UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium RepID=B2V5Y5_SULSY Length = 411 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 2/259 (0%) Query: 197 IYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNT 256 +LD + S++ FG+W KG+ Y + + L +DF + Sbjct: 155 FLNSILDGGIFSNISHQSCAFGIWLKEKGKEYIDEEHILKDLKHLHKDFHNLIEIAESYK 214 Query: 257 RNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKRE 316 +N + L +L I+N + I L + + E+ +D LT NRR I ++ Sbjct: 215 KNKKFKDLYF-MILNIQNIMIWIGNEFLYLNTKFIKLEMSIDPLTGAFNRRGFEIIIQKL 273 Query: 317 IAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 + + T P+++ + D+D FK+INDT+GH GDE L+ N+R SDYVFR GG+ Sbjct: 274 LEISQITDAPITLAMADLDYFKKINDTFGHLAGDEALKHFVNIIKRNLRKSDYVFRIGGE 333 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQ 436 EF+I+L + + ERIR +E+ L +G++I ++ S G A + +I+ Sbjct: 334 EFLILLPNTELKDAVEIVERIRKDLEENSL-HYDGKEIKITASFGLAEVDKEKYINEIIK 392 Query: 437 IADEALYIAKRRGRNRVEL 455 ADE LY AK GRN+V + Sbjct: 393 KADEKLYKAKESGRNKVVV 411 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 123/230 (53%), Gaps = 16/230 (6%) Query: 237 HISRLIQDFDGIFNQTMRNTRNLNNRSL------RVKFLLQIRNTVSQI-----ITLLRE 285 H+ +I+ ++ LN ++ + F+ + N + IT +E Sbjct: 547 HVKDIIKALTNKTPIILQEFHILNKKNQTLYVKGSLNFIKDVENKPVAVFTFVDITKEKE 606 Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L + + + + D LT + NRR+L + + A R PLS+++ D+D FK IND++G Sbjct: 607 LSDMLLK-QSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFG 665 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H+ GD++L+ +++ +N+R++D RYGG+EF+I+ E ++ + AE++RS + Sbjct: 666 HDVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNLH 725 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + E I ++ S G A H E L++ ADEALY AK+ GRN+V + Sbjct: 726 FE----EGINVTCSFGVASLEKHDTKETLLKRADEALYEAKKTGRNKVVV 771 >UniRef50_B9M9A9 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M9A9_GEOSF Length = 400 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 29/277 (10%) Query: 187 ASILSWEIDIIYKILLDSDLGSSLPL--SQADFGLWFNHKGRHYFSGIAEVGHISRLIQD 244 A++LSW I ++Y++L+ LP+ + F + FN +G++ I R ++ Sbjct: 138 ATVLSWTIFLLYEVLVIWTKSIPLPILTNNTFFFIAFN------ITGMSASYSIERYMR- 190 Query: 245 FDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLL 304 + R K Q N ++ + + E + +D LT L Sbjct: 191 ---------------QDFLQRRKIREQTENLKKALLDVEKSRHE--AEEMAKLDPLTSLY 233 Query: 305 NRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV 364 NRR +I +RE+A R LS+++ID+D FK +NDT+GH GD++L+ ++ A + Sbjct: 234 NRRHFFSIAERELARYRRYRHSLSIIMIDLDHFKRVNDTYGHFIGDQVLQALAAAIDKLM 293 Query: 365 RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAM 424 R +D RYGG+EF I++ E RI+ +E T++ G I ++LS+G A Sbjct: 294 RKADTPCRYGGEEFAILMPETDLAAAQNLGRRIKDAIESTEIDTRKG-PIKVTLSMGIAS 352 Query: 425 FNGHPD--YERLIQIADEALYIAKRRGRNRVELWKAS 459 +G D E+L++ AD ALY AK GR+ + +W S Sbjct: 353 LDGAEDACIEQLVERADHALYQAKYSGRSLIRIWDKS 389 >UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DXV0_SULAA Length = 437 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 12/258 (4%) Query: 202 LDSDLGSSLPLSQ-ADFGLWFNHKGRHYFSG--IAEVGHISRLIQD-FDGIFNQTMRNTR 257 D+D+ S+LP + +F W G+ Y EV H +L + F+ I + ++ Sbjct: 177 GDTDVLSNLPDYKICEFTKWLEEHGQKYIDEKSYEEVWHFHKLFHEKFEKIKHIY---SK 233 Query: 258 NLNNRSLRVKFLLQ-IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKRE 316 N N SL V LL+ I N +++ +L + + D LT NR L + +E Sbjct: 234 NKENNSLAVYLLLKDIENASLKLLFILNRISLDNVSKIALKDSLTGFFNRHMLDVLLSKE 293 Query: 317 IAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 + + R G +S+L++D+D FK IND +GH GDE+L S+ +N+R SDY FRYGG+ Sbjct: 294 TSRSKRHGYKISILMMDLDNFKNINDIYGHLVGDEVLMHFSRIVKNNLRESDYPFRYGGE 353 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQ 436 EF+I+L E L AERIR VE K +++S G + I+ Sbjct: 354 EFLILLPHTDEEGALVVAERIRKSVESYKFPVIE----RITVSCGVREIKNLDNPYIDIE 409 Query: 437 IADEALYIAKRRGRNRVE 454 AD LYIAK+ G+NR Sbjct: 410 EADRYLYIAKKTGKNRCV 427 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 120/210 (57%), Gaps = 9/210 (4%) Query: 248 IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRR 307 + N+ M +R+ + + LR ++ +++ R+ EE + + +D LT + NRR Sbjct: 388 LLNRGMVISRSSDGKPLR---MIGTSTDITE-----RKQLEEELKRQARIDFLTGVSNRR 439 Query: 308 FLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS 367 + ++EI +R TPLS ++D+D FK++NDT+GH +GD +L++++ + +R Sbjct: 440 YFMEQAEQEIQRTSRYDTPLSFFMLDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLREI 499 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAM-FN 426 D + R GG+EF I+L E + + AER+RS + K+ G I ++SIG A + Sbjct: 500 DIIGRVGGEEFAILLPETDKAQAAEVAERLRSVLADEKVPTEAGAPIQFTVSIGVASRVS 559 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRVELW 456 + + L+ +ADEALY AK+ GRNRV + Sbjct: 560 SQDNIDMLLNLADEALYQAKKYGRNRVYIA 589 >UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTU0_9FIRM Length = 491 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 8/236 (3%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 KG H G++EV + + G+ + + L + L L + + +S I Sbjct: 256 KGTH--DGVSEVAVPLIVNNEIIGVLDVETNQAKRLQDYDL--DLLRSLASQISMTIAHA 311 Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 + + D LT L N R+ T+F+RE A R PLS+L+ID+D FK NDT Sbjct: 312 NHVSR--VELQAITDGLTGLYNYRYFQTLFEREFKRAVRYKRPLSLLMIDIDYFKLYNDT 369 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GD I+R +++ N R D V RYGG+EF ++ E + +E + AERIR V + Sbjct: 370 YGHRQGDHIIRTIAKIIRQNCRDVDIVVRYGGEEFAVLFPETTVDEAFKIAERIRMAVAE 429 Query: 404 TKLKAANGEDIAL-SLSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRNRVELWK 457 + + + ++S+G A + E LI AD ALY AKR +NRV L++ Sbjct: 430 YPFANKHSQPGGILTVSMGVAGYPYDAQSETELIDHADMALYRAKRTSKNRVCLYR 485 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 103/169 (60%), Gaps = 1/169 (0%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 ++E +D LT + NRR+L T + E+ + R G PLS++++D+D FKEINDT G Sbjct: 130 IYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDIDHFKEINDTHG 189 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD LRK+S+ + VR+SD + RYGG+EF +L E S + L AER R++V ++ Sbjct: 190 HICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLAERCRTQVAASQ 249 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + + +++SIG + + +I+ AD+ALY AKR GRNRV Sbjct: 250 FSCTDHQS-RVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNRVC 297 >UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y4_AMMDK Length = 615 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 2/186 (1%) Query: 274 NTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIID 333 + + +I LR E++R +D LT+L NRRFL ++ A R P S+L ID Sbjct: 412 SITAAMIANLR--LSELNRRLSLIDPLTQLYNRRFLEEYLTHQVVEAQRLNRPFSILFID 469 Query: 334 VDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRT 393 VD+FK +ND +GH GD L ++Q N+R +D V RYGG+EFI VL + Sbjct: 470 VDQFKNVNDFYGHEVGDIALTLLAQTIKQNLREADAVVRYGGEEFIAVLPGTDLEGAAQA 529 Query: 394 AERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 AE++R V +T + +GE+I L++SIG A + + E +IQ ADEA+Y AK +G+N V Sbjct: 530 AEKVRRAVAETPICLESGENIFLTVSIGVAQYRIGLNPEEVIQRADEAMYQAKIKGKNLV 589 Query: 454 ELWKAS 459 + Sbjct: 590 VAYHEG 595 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 124/277 (44%), Gaps = 25/277 (9%) Query: 189 ILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGI 248 + SW + ++ IL+ + LP + + + + Sbjct: 325 LYSWSLFMLGAILVALNKFDVLP--------------SNMITEYSMLFGTGVGTVVLSAA 370 Query: 249 FNQTMRNTRNL----NNRSLRVK--FLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTK 302 + + +N +LRV+ + + V + + LRE E D LT Sbjct: 371 LAVRLNDEKNKRYHAQAEALRVQRESVELLEERVKERTSALRE-ANEKLEKLSNTDSLTG 429 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 L NRR L + E+ RTG PLS +++D+D+FK NDT GH GD L+ V+ Sbjct: 430 LNNRRSLDELLAMEVKRTCRTGAPLSAMMMDIDRFKAFNDTHGHQVGDACLKAVAGVIAS 489 Query: 363 NV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 R SD V RYGG+EF ++L + + AERIR+ VE +G+ + +++SIG Sbjct: 490 TAQRPSDVVGRYGGEEFCVLLPDTPLDGAQIIAERIRAAVENLDF-TVSGQRVPVTISIG 548 Query: 422 AAM--FNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 + + + L++ ADEALY AK GRN V L Sbjct: 549 VSELTYCASDSGKALVEAADEALYSAKSAGRNCVRLA 585 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 64/160 (40%), Positives = 96/160 (60%), Gaps = 1/160 (0%) Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 D LT + NRR+ EI RTGTPLSV+++D+D FK++NDT+GH+ GD++L Sbjct: 312 ATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVNDTYGHHVGDQVLM 371 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 +V+Q + R SD V R+GG+EF+I+L + N AE+IR +E A G ++ Sbjct: 372 EVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLSFPTAEG-NV 430 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +++ S G + + G +R++ AD ALY AK GRN V Sbjct: 431 SVTASFGVSQWQGETKIDRVVSRADAALYQAKHDGRNCVR 470 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 77/225 (34%), Positives = 124/225 (55%), Gaps = 7/225 (3%) Query: 235 VGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL--FEEVSR 292 +S + D DG+ + TRN++ R +R T Q+ + E+ + + Sbjct: 416 TEVVSSYLLDADGVAQTILGITRNVSE---RKAVESALRETNRQLHARIEEIGRLQVALQ 472 Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 D LT L NRR+L +RE++ A R G PLS++++D+D FK++NDT+GH GDE+ Sbjct: 473 ELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDHFKQVNDTYGHQVGDEV 532 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE 412 LR ++ ++R+ D RYGG+EF+I+L T+ A+ RS VE +K N + Sbjct: 533 LRILASTLSADIRAEDVACRYGGEEFLILLPNMPLETTMLRAQGWRSAVEALSVKHGNFQ 592 Query: 413 DIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELW 456 I ++S+G A + H + L + AD+ALY AK GRN+V ++ Sbjct: 593 -ITFTISLGVAAYPEHGKTPDDLTRCADQALYRAKNEGRNQVSVF 636 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 68/167 (40%), Positives = 95/167 (56%), Gaps = 1/167 (0%) Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 +E R D LT L NRR + E+ R GTPL+++ IDVD+FK +NDTWGH Sbjct: 543 QERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRVNDTWGHA 602 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GDE+LR ++ VR D V R GG+EF ++L + + E + AER+R+ VE L Sbjct: 603 VGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEAAPLL 662 Query: 408 AANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 G + ++LS+G + + L++ AD ALY AK GRNRVE Sbjct: 663 TTAG-PLTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNRVE 708 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 1/196 (0%) Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 +L + L R ++L+ R + D LT L NRR+L F RE+A Sbjct: 349 GEALELARPLAQRFAERVALSLVNLRLRATLRQQSIRDPLTGLYNRRYLEETFTRELARV 408 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 R PLS+L+IDVD FK+ NDT+GH GD +LR+++ R+ D V RYGG+EF++ Sbjct: 409 QRRRQPLSLLMIDVDHFKQHNDTYGHALGDTLLRRLATHLQRFFRTEDIVCRYGGEEFVV 468 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIAD 439 +L E + AE +R VE + + + E +AL++SIG A + H E L+ AD Sbjct: 469 LLPECDAPQAQARAEALRRSVENLAVTSNDAEFVALTISIGGASWPDHATTPEDLLARAD 528 Query: 440 EALYIAKRRGRNRVEL 455 ALY AK RGRNRVE Sbjct: 529 AALYRAKHRGRNRVEF 544 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 6/185 (3%) Query: 272 IRNTVSQII-TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 +R+ V Q++ + L+E ++R + D LT L NR +E+A RTG PLS++ Sbjct: 542 VRDRVQQLLRSELQERAAALAR-QATTDPLTGLHNRLRFNEGLAQELARVRRTGQPLSLV 600 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENET 390 + DVD FKE+ND +GH TGD++L ++SQ +R +D + R+GG+EF I+L +A + Sbjct: 601 MFDVDHFKEVNDRYGHPTGDQVLIRLSQTAAAQLRQTDLLARWGGEEFAILLVDADLHAA 660 Query: 391 LRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGR 450 + AE +R V +T +++ S G A + L++ AD ALY AK GR Sbjct: 661 VEVAENLRRLVARTPFDQIG----SVTASFGVAECRPDESADSLLERADAALYRAKSNGR 716 Query: 451 NRVEL 455 NRVE+ Sbjct: 717 NRVEI 721 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 74/220 (33%), Positives = 127/220 (57%), Gaps = 4/220 (1%) Query: 239 SRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRE--LFEEVSRHEVG 296 LI+ F+ T+ + N RV+ L+++ T Q+ L++E + R Sbjct: 95 EYLIEAFEKGAADTITHPFNPAEILARVRTHLELKQTQKQLNRLVKEHEKLANLLRKLAI 154 Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 D LT L NRR T+ +E A+R +S+L+ID+D FK+IND +GH GDE+L+ V Sbjct: 155 TDPLTGLWNRRHFLTVAYQEFNRASRYKRFMSILMIDIDHFKQINDEYGHTMGDEVLKGV 214 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 +++ ++R +DY R+GG+EF+ +L E + +R AER+R R+E+ + + + + + Sbjct: 215 AKSIVGSLREADYCGRFGGEEFVTLLPETDSSGAVRVAERLRKRMEQITIGIGD-KQVQM 273 Query: 417 SLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++++G A + + E +IQ A++ALY AK +G NRV L Sbjct: 274 TVTVGVASYQLDDANIEVIIQRANKALYHAKSQGYNRVAL 313 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 2/192 (1%) Query: 264 LRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRT 323 L ++ + S I R+ EV R D LT++ NRR L EI+ R+ Sbjct: 192 LSTPYIGLLVAMNSSAIRRWRQRESEV-RQLSTTDPLTQVANRRHLLERLNLEISRCERS 250 Query: 324 GTP-LSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 G LS+L++D+D FK IND GH GDE LR ++ + R++D V RYGG+EF ++L Sbjct: 251 GHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTARVLREQSRNTDLVGRYGGEEFCLLL 310 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 + L+ AER R +E+ + +GE + ++ SIG A + E L+ ADEAL Sbjct: 311 PDTGPQGALQIAERCRQALEQADIDREDGEVLHITTSIGLATYQMGDTNESLLHRADEAL 370 Query: 443 YIAKRRGRNRVE 454 Y AK +GRNR+ Sbjct: 371 YQAKEQGRNRIV 382 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 110/209 (52%), Gaps = 3/209 (1%) Query: 253 MRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE--EVSRHEVGMDVLTKLLNRRFLP 310 MR R L S + L + L+EL E E +D LT LLNRR Sbjct: 247 MRMNRLLTAASAVLVLGLLLGLLAVINNRFLKELREAQEKLVEMATIDSLTGLLNRRAGL 306 Query: 311 TIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYV 370 + E++ R+ + L++D+D+FK+INDT+GH GD +L + +VR D V Sbjct: 307 ERVEEELSRHQRSERAFACLLLDIDRFKKINDTYGHQAGDAVLSEFGATLRRHVRKHDIV 366 Query: 371 FRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD 430 RYGG+EF+++L + S + TAE+IR+ T + A G IA++ SIG +M G Sbjct: 367 CRYGGEEFLLLLPDTSPSAARTTAEKIRAVTAATPIMFA-GRQIAVTTSIGISMMQGDET 425 Query: 431 YERLIQIADEALYIAKRRGRNRVELWKAS 459 + +I AD ALY AK GRNRV +A+ Sbjct: 426 AKAMIARADAALYEAKNSGRNRVVCAEAN 454 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 119/204 (58%), Gaps = 3/204 (1%) Query: 260 NNRSLRVKFLLQIRNTVSQIITL--LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREI 317 + + Q+ VS+ I+L + E + + D LT L NRR++ KREI Sbjct: 874 SEPDKLSEVKQQLARAVSEHISLALVNLQLRESLKAQSIKDSLTDLYNRRYMEESLKREI 933 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 + A R + +++IDVD FKE NDT+GH GD +L++VS NVRS D RYGG+E Sbjct: 934 SLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVSNFLMINVRSGDIACRYGGEE 993 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQ 436 F+++L EAS ++ + AE+IR +++ K + ++++S+G A F H ++LIQ Sbjct: 994 FLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSFRSVTVSVGVASFPDHGTNNDQLIQ 1053 Query: 437 IADEALYIAKRRGRNRVELWKASL 460 AD ALY AK++GR+RV ++ + Sbjct: 1054 AADTALYQAKKQGRDRVVVFSPFM 1077 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 6/199 (3%) Query: 258 NLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREI 317 L + + L I V+++ T ++L E +D LT + NRRFL + K E Sbjct: 109 PLRDEDNAITSLFLIVQDVTELATYEQKLIE-----MNTVDALTGVYNRRFLESRLKEEC 163 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 R P S+++ID+D FK++NDT GH GD +L+ V+ +R SD++ RYGG+E Sbjct: 164 DRYGRYSRPFSLMMIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEE 223 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQI 437 F +L E + AE +R+ +E + + I +++S+G A F E L++ Sbjct: 224 FCCLLPETDCDAAETVAEHLRAHIENME-HLFQKKVIRVTISLGIACFAPDDSPETLVKR 282 Query: 438 ADEALYIAKRRGRNRVELW 456 ADEALY AKR GRNR + Sbjct: 283 ADEALYQAKRSGRNRFVRF 301 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 66/175 (37%), Positives = 104/175 (59%), Gaps = 3/175 (1%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + EE R +D LT+L NRR+ T+ ++E R P+++ +ID+D FK +ND + Sbjct: 251 KRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDHFKSVNDRY 310 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH GD +L V+Q +DN+R D + RYGG+EF+I+L E + ER+R V + Sbjct: 311 GHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETDLQTACASTERLRVAVAER 370 Query: 405 KLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWK 457 +++ +G ++++LS+G P ERL+ AD+ LY AK+ GRNRVE+W Sbjct: 371 RIETPSG-PVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRVEIWD 424 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 4/230 (1%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE 289 G+ + + + + + I ++ + + R++ + + I R+ EE Sbjct: 440 KGLCLITAVGQEMDWAERILHRMDGSQLPVLKIVKRLRTKSGEKLIETFIDLTERKKLEE 499 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 D LT+ NRR+ + +REI A RT P +++++D+D FK +ND +GH G Sbjct: 500 QLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKNVNDRFGHAAG 559 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +L+ ++ + +R +D + R+GG+EF+I+L + AE +R ++ ++ Sbjct: 560 DLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELREQLSMLEIPGV 619 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 ++ S G + + L+ AD+ LY AK GRN V + Sbjct: 620 G----RVTASFGVTGYCPGDTLDTLLMRADQMLYTAKASGRNCVRFSEKC 665 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 8/190 (4%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 + L+ + T+S I+ +++E F + +D LT + N+ + + E+ + R G Sbjct: 317 INLLVGLLLTMSFILGVIKERF----KAMAEIDTLTGIYNKGKFNHLLQVELDRSKRYGR 372 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 PLS++I D+D FK+IND +GH GD +L+ +++ N+RS+D+ R+GG+EF+I+ E Sbjct: 373 PLSLIIFDIDHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTDFFARWGGEEFVILAPET 432 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIA 445 AE+IR +E+ + ++ S G + + ++ AD ALY A Sbjct: 433 DLEGAQILAEKIRKAIEEYPFETVG----KVTSSFGVTEAFENDTVDSFVKRADVALYKA 488 Query: 446 KRRGRNRVEL 455 K +GRNRVE+ Sbjct: 489 KDKGRNRVEI 498 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 114/192 (59%), Gaps = 5/192 (2%) Query: 265 RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 R++FL N +Q+ ++ E +E+ + D LT+L NRR + E R+ Sbjct: 813 RIRFL---NNQRAQLELMVAEKTKEL-KGLARQDSLTQLGNRRAFDEQLQYEFKRCERSE 868 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 PLS+ IIDVD FK IND + H GD++L ++S + +R DY+ R+GG+EF +++ E Sbjct: 869 QPLSLAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNMLRDIDYIARWGGEEFALLMPE 928 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYI 444 + E L+ AERIR R+E T + E +A+++SIG A +P++ L+ AD+ALY Sbjct: 929 TTAKEALQAAERIRQRIEDTSYQHLADE-LAVTVSIGVASSEHYPNHSALLVAADKALYK 987 Query: 445 AKRRGRNRVELW 456 AK+ GRNR EL Sbjct: 988 AKQSGRNRTELA 999 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 5/212 (2%) Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 G+ N +++ ++ + + +++ LRE E + D LT L NR Sbjct: 757 GLLNLCSDRAGVISSDQQQLAKAVAEQVSLAIANIKLRERLEN----QSIRDPLTGLFNR 812 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 R+L F +EI A R + V++ D+D FK+ ND GH+ GD +L+ + + N+R Sbjct: 813 RYLEQFFLQEIGRAKRYNHSIGVIMGDIDHFKQFNDQLGHDAGDHVLKTIGRILQSNIRG 872 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 SD RYGG+E IVL + S +TL AE +R + +++ E L++S+G A + Sbjct: 873 SDIACRYGGEEMTIVLPQTSLEDTLVKAESLRQAIASMEVEYKGKELGTLTVSLGVACYP 932 Query: 427 GH-PDYERLIQIADEALYIAKRRGRNRVELWK 457 H +IQ AD ALY AK GRNRV + Sbjct: 933 NHGETMVNIIQAADRALYQAKAAGRNRVVMAD 964 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats. Identities = 81/271 (29%), Positives = 123/271 (45%), Gaps = 13/271 (4%) Query: 197 IYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVG--HISRLIQDFDGIFNQTMR 254 Y + L L L+ + G W R F+ +A + ++ F + M Sbjct: 291 FYVLAWTPLLLGHLVLAVSKLG-WIP---RSPFTELAPQAGVAVEVILLSFALAYRINME 346 Query: 255 NTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE---EVSRHEVGMDVLTKLLNRRFLPT 311 R + + Q T+ + E E E R D LT + NRR Sbjct: 347 RRRRQQAQEHALDIQRQANLTLESRVRERTEELEQANEQLRAISLTDGLTHVANRRRFDE 406 Query: 312 IFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV-RSSDYV 370 + E A R LS++++D+D FK++ND +GH GD+ L ++ D V RS D V Sbjct: 407 KLETEWNRALRHEHELSLILLDIDHFKQVNDRFGHLVGDDCLVALASILSDEVQRSGDLV 466 Query: 371 FRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG-EDIALSLSIGAAMFNGH- 428 RYGG+EF I+L + AER+R V +T + + ++L++S+G A + Sbjct: 467 ARYGGEEFAILLPTTDVAGAQQVAERMRLSVARTPVNSGEHMSPVSLTISLGVATLTPNR 526 Query: 429 -PDYERLIQIADEALYIAKRRGRNRVELWKA 458 D + LI+ ADEALY AK GRNRV +W Sbjct: 527 QSDCQELIRRADEALYAAKSDGRNRVVVWHP 557 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 66/169 (39%), Positives = 99/169 (58%), Gaps = 4/169 (2%) Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 + V+ + D LT L NR + T+ + EI A R P+S+L+ D+D FK+INDT+GH Sbjct: 325 LKNVAEKKAITDKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYGH 384 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 + GD L+ +++ +R SDYV R+GG+EF+ +L E + + AE+IRS +E Sbjct: 385 DKGDYALKTIAEIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYNF 444 Query: 407 KAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 K +++SIG M + I+ ADEALY AK +GRNRVE+ Sbjct: 445 KDIG----RVTVSIGVTMLKIGEPLDNAIKRADEALYAAKNKGRNRVEV 489 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 2/160 (1%) Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 D LT+L NRR L + +EIA ++R PLSVL++D+D FK++NDT+GH GD +LR Sbjct: 225 SIKDELTQLYNRRALEELLPKEIARSSRHKQPLSVLLLDIDHFKKVNDTYGHQAGDRVLR 284 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 + R D FRYGG+EF+++L + + AE++R +++ ++ N + Sbjct: 285 TTGKLLILQTRKDDLSFRYGGEEFLVLLPNTDVEKAVIVAEKLREAIKRARMLPTNVD-- 342 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + + S G FNG D++ I+ AD+ALY AK GRN+V Sbjct: 343 SCTASFGVTQFNGEDDWQTAIERADQALYSAKENGRNQVT 382 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 73/176 (41%), Positives = 103/176 (58%), Gaps = 1/176 (0%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ E D LT +LNRR + E+ A R PL++L ID D FKEINDT Sbjct: 223 RKQLENELEALATRDSLTGVLNRRECSRVLIEELERARRYNRPLALLWIDFDHFKEINDT 282 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 WGH GD +L +S D+VRS D + R+GG+EF+++L E E TAER+R RV Sbjct: 283 WGHAAGDSVLCSISSLLEDSVRSVDTLGRFGGEEFVLILPEMDVAEAEETAERLRQRVCN 342 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVELWKA 458 + +G +I L++SIG A+F H D + L AD+A+Y AK++GRN + + +A Sbjct: 343 QPVALESGHNIRLTISIGVAVFPDHGDTLDALCAAADKAMYRAKKQGRNCIAMAQA 398 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 77/177 (43%), Positives = 103/177 (58%), Gaps = 10/177 (5%) Query: 279 IITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 I L+REL R D LT NRR + I +EI + R G PLSVL IDVD FK Sbjct: 116 ISDLIREL-----RFLADTDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDNFK 170 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 E+NDT+GH +GDE+LRK+++ +R +DYV R+GG+EF+++L E LR AERIR Sbjct: 171 ELNDTYGHKSGDEVLRKIAEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAERIR 230 Query: 399 SRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 RVE+ K +++S+G D L D A+Y+AK RG+NR EL Sbjct: 231 KRVEREDFKTG-----KVTVSVGVTELKEGDDLNTLFNRVDRAMYLAKERGKNRSEL 282 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 9/219 (4%) Query: 244 DFDGIFNQTMRNTRNLN--NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 D I++Q NT + ++ + L I VS++ L + +E + D LT Sbjct: 195 DVTDIYSQIRANTLIASGLTAAISLSLLSMIWILVSRLARRLTKAYETI-EVMSITDELT 253 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 +L NRR T EI+ + R G+P+S++I+D+D FK +ND +GH GD +L + + Sbjct: 254 RLHNRRHFETRLAEEISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDWVLTQFATLLK 313 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 DNVR +D R+GG+EF+++LTE++ ++ AE++R VE + +G I +++S+G Sbjct: 314 DNVRKADVPARWGGEEFVVILTESTISQARMAAEKVRRNVESAEFNIPDGRSIPVTVSVG 373 Query: 422 AAMFN------GHPDYERLIQIADEALYIAKRRGRNRVE 454 A + + + L++ AD+ALY AK+ GRNR Sbjct: 374 VASLDMISGDEMGSEADVLVKTADDALYRAKQEGRNRTV 412 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 6/177 (3%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 ++ +++L +++ D LT + NR I K I ++ R TPLS++ +D+D FK+ Sbjct: 580 LSKIKKLSKQL-ETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKK 638 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 IND +GH GD +L+++ + ++R SD R+GG+EF+I+L N AE+IR Sbjct: 639 INDNFGHEKGDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRD 698 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 +E + I +++S+G E + AD ALY AK+ GRNRV ++ Sbjct: 699 AIESHDF-----DGIKVTVSLGVTQLKEDDTIESFVNRADIALYQAKKEGRNRVVVF 750 >UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UV88_9AQUI Length = 475 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 68/163 (41%), Positives = 103/163 (63%), Gaps = 1/163 (0%) Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 D LT L NRRF + I + R PLS+L++D+D FK IND +GH+ GD +L+ Sbjct: 307 AYTDPLTGLNNRRFFMENARTIIDLSKRYREPLSLLMMDIDNFKSINDNYGHDVGDLVLK 366 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 K+++ NVR+SD R+GG+EF+++L E L AERIR+ + +K +G+DI Sbjct: 367 KLAEVIRKNVRTSDIPARFGGEEFVVLLPRTDEKGALMVAERIRNEFRNSSVK-VDGKDI 425 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 S+SIG ++ + D + LI+ ADEALY AKR G++RV +++ Sbjct: 426 WTSVSIGLSVLSEEDDIDSLIKKADEALYQAKRSGKDRVVIYR 468 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 4/225 (1%) Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI-ITLLRELFEEV 290 + E GH+ + + + + +L L + Q+ + + E Sbjct: 167 MPEHGHLLLPLYAKERVVGVFFYYLPP--DLTLTKAELETFQTVSYQLGLAIDNARLYET 224 Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 R D LT L N + E++ RTG PLS+L++D+D FK++NDT+GH GD Sbjct: 225 VRRLSIYDPLTGLFNHGQFYNLLAEELSRHQRTGRPLSLLMLDIDHFKKVNDTYGHRAGD 284 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 +L+++S R+ D V RYGG+E ++L E +TAER+R VEK Sbjct: 285 AVLQQLSGLLKKQARAIDRVCRYGGEELALILPETDREAARQTAERLRRHVEKCCFATCG 344 Query: 411 GEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVE 454 ++I +++SIGAA E L+ AD ALY AKR GRNRV Sbjct: 345 QQEIGVTVSIGAATCPDAAISAETLVNAADRALYAAKRAGRNRVC 389 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 3/197 (1%) Query: 267 KFLLQIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 Q+ TV++ + L E + D LTKL NRR+L +E+A A R Sbjct: 570 DIRQQLAKTVAEQLALAIANLKLREQLEEQSLRDPLTKLFNRRYLEQRLSQELARAKRHH 629 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 + VL+IDVD FK ND+ GH+ GD IL + +N+R+SD RYGG+E I+L + Sbjct: 630 YSVGVLMIDVDHFKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPD 689 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALY 443 A+ E + AE +R + + K++ + +++ S G A + H + +IQIAD+ALY Sbjct: 690 ATLEEASQKAEFLRQAIAEMKIEYSGKIVNSVTASFGVACYPDHGETGQEIIQIADKALY 749 Query: 444 IAKRRGRNRVELWKASL 460 AK+ GRNRV + + Sbjct: 750 DAKQAGRNRVIVAPKEV 766 >UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZN3_9GAMM Length = 395 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 2/175 (1%) Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 E R D LT L NRR L F E+A A RTG LSV ++D+D FK+IND GH Sbjct: 215 EAQVRAMAVQDPLTGLSNRRALFDQFAHEMARARRTGEALSVCVMDLDHFKQINDRHGHA 274 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GD +L +V+ + +R +D + R GG+EF++VL + + ER R+ + T + Sbjct: 275 AGDTVLVRVANLLRECLRETDRIGRIGGEEFVLVLPDTGHEGAEKVIERCRAALVGTPVM 334 Query: 408 AANGEDIALSLSIGA--AMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 GE + +S S G A+ +L+ AD+ALY+AK+RGRNRVE W +++ Sbjct: 335 LDVGEPLTVSASFGVVTALAGEQATESQLVSRADDALYLAKKRGRNRVEFWSSAM 389 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 109/201 (54%), Gaps = 3/201 (1%) Query: 260 NNRSLRVKFLLQIRNTVSQIITL-LREL-FEEVSRHEVGMDVLTKLLNRRFLPTIFKREI 317 NN + LQI TV++ + L + L E +++ D LT L NRR+L + +EI Sbjct: 1413 NNSTALPDAKLQIARTVAEQVALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEI 1472 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 A R P+SV++IDVD FK NDT+GH+ GD +L+ + + VR SD RYGG+E Sbjct: 1473 ARGQRRQHPISVVMIDVDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEE 1532 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQ 436 ++L E+S ET AE IR + + L L++S+G A F H LIQ Sbjct: 1533 MTLILPESSLEETTIKAEEIREAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGIALIQ 1592 Query: 437 IADEALYIAKRRGRNRVELWK 457 AD ALY AK GRN+V + Sbjct: 1593 AADAALYRAKAAGRNQVVVAP 1613 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 99/189 (52%), Gaps = 3/189 (1%) Query: 270 LQIRNTVSQII--TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 Q+ +TV++ I + H+ D LT L NRR+L +EIA A R P+ Sbjct: 1190 QQLAHTVAEQIGMAIANLNLRATLEHQSIRDPLTGLFNRRYLEEYLSQEIARAQRQKHPI 1249 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 V+++D+D FK NDT+GH+ GD +L+KV + VR D RYGG+E ++L +S Sbjct: 1250 GVIMMDIDNFKHFNDTFGHDAGDYVLQKVGELLKQKVREYDVACRYGGEEMTLILPGSSL 1309 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAK 446 T AE+IR + + + +++ S G A F H LIQ AD ALY AK Sbjct: 1310 ENTSMRAEQIREAIASLVVASGGQHLGSITASFGVAAFPKHGSIGIDLIQAADAALYRAK 1369 Query: 447 RRGRNRVEL 455 GRNRV + Sbjct: 1370 ADGRNRVVI 1378 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 77/192 (40%), Positives = 112/192 (58%), Gaps = 3/192 (1%) Query: 270 LQIRNTVSQIITL--LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 Q+ VS+ I+L + E + D LT L NRR++ KREI A R P+ Sbjct: 928 QQLARAVSEHISLALVNLQLRESLESQSIKDSLTGLYNRRYMEESLKREINLAQRKQHPV 987 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 +++IDVD FK+ ND +GH GD IL +V NVRS D RYGG+EF+++L EAS Sbjct: 988 GLIMIDVDHFKQFNDNFGHKAGDLILHEVGNFLMANVRSGDIACRYGGEEFLLILPEASL 1047 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIADEALYIAK 446 +++ + AE+IR +++ + N +L++SIG A F H E LIQ AD ALY AK Sbjct: 1048 SDSQQRAEQIRKGIKQLNFQQYNSAFTSLTVSIGVACFPAHGKQGETLIQSADMALYQAK 1107 Query: 447 RRGRNRVELWKA 458 +GR+RV ++ + Sbjct: 1108 NQGRDRVVVFSS 1119 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 102/176 (57%), Gaps = 5/176 (2%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 IT +EL E + + + D LT + NRR+L +R + A R PLSV++ D+D FK Sbjct: 439 ITKEKELSELLLK-QSIEDTLTGIYNRRYLKDKLERHVNLAKRYERPLSVIMFDIDFFKH 497 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 INDT+GH+ GD++L +S+ +N+R++D RYGG+EFIIV E ++ + AE++RS Sbjct: 498 INDTFGHDVGDKVLIAISKVVSENIRNTDIFARYGGEEFIIVAPETTKEDAKILAEKLRS 557 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + + E I ++ S G E L++ D ALY AKR GRNRV + Sbjct: 558 LIRNLHFE----EGINVTCSFGVVSLEKPDTKETLLKRVDNALYEAKRTGRNRVVV 609 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 3/198 (1%) Query: 260 NNRSLRVKFLLQIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREI 317 ++ + Q+ TV++ + L E ++ D LT L NRR+L +REI Sbjct: 804 DSPDQLCESKRQLARTVAEQMALAIANLQLREELQNRSIRDPLTGLFNRRYLEESLEREI 863 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 A R + V++ID+D FK NDT+GH+ GD +L++V + ++R+SD RYGG+E Sbjct: 864 NRACRNDHNVGVIMIDIDHFKRFNDTFGHDGGDAVLKEVGKLLKSSLRASDIACRYGGEE 923 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQ 436 ++L EAS T + AE++R +++ ++ ++ S+G A F H + ++Q Sbjct: 924 MTLILPEASIENTYKRAEQVRKLIKQINIEHKRQSLGTITASLGVACFPEHGMTGDAVVQ 983 Query: 437 IADEALYIAKRRGRNRVE 454 AD ALY AK+ GR+RV Sbjct: 984 RADTALYQAKKEGRDRVV 1001 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 14/271 (5%) Query: 189 ILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGI 248 + + EI+IIYK + + + + L F+ + + ++ D G+ Sbjct: 638 LENLEIEIIYKNKYFDTMIKNQGIKTFEDFLIFDDDKKELMKRY-----LRKITADEGGV 692 Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVS-----RHEVGMDVLTKL 303 F + N L++ +N + I+ +L+++ EE D LT + Sbjct: 693 FTINDIIMKQDKNIVLKLNMNRINQNHETLILCILQDITEESMIIKYFEELSIKDDLTGI 752 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 NRR L + + A R PLSV++ D+D FK IND++GH+ GD++L+ ++ N Sbjct: 753 CNRRCLEDKLEEYLTLAKRYNRPLSVIMFDIDFFKHINDSYGHDIGDKVLKTIANIVLSN 812 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 +R++D + RYGG+EF+I+ E + + AE++R +E + E +++ S G Sbjct: 813 IRATDILARYGGEEFVIISPETTLEDAKALAEKLRKEIENFLFE----EGFSITCSFGVT 868 Query: 424 MFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 N E +++ DEALY AKR GRNRV Sbjct: 869 SLNQEDTKETILKRVDEALYKAKREGRNRVV 899 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 82/272 (30%), Positives = 135/272 (49%), Gaps = 10/272 (3%) Query: 195 DIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLI-QDFDGIFNQTM 253 DI + S L + + + + KG H VGH ++ F ++ + + Sbjct: 294 DIATALKPASSLAALMMVVTFSVSISLFRKG-HPLVKFFLVGHTFFVVFNGFAVLYYKGL 352 Query: 254 RNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEV------SRHEVGMDVLTKLLNRR 307 +N+ + + +L+ T++ II+ ++ E++ + + D LT+L NRR Sbjct: 353 VQPNYINSHGVGIGIVLEAL-TLAFIISYRIKVLEDIRSKQDELKRQASTDPLTRLFNRR 411 Query: 308 FLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS 367 + + + A +G PLSV+ ID+D FK +NDT GHN GD +L +V+ F R Sbjct: 412 YFMAEGEYVLEQARTSGEPLSVIAIDIDHFKAVNDTHGHNVGDLVLVEVASVFRQFSRDR 471 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG 427 D V R+GG+EF+I+L A E AERIR+ VE + +G + +++S+G A N Sbjct: 472 DLVARFGGEEFVILLPGADLTEGFGCAERIRNAVEAMVIDGGDGLAVRVTVSVGVAEVNP 531 Query: 428 -HPDYERLIQIADEALYIAKRRGRNRVELWKA 458 E ++ AD +LY AK GRNRV + Sbjct: 532 LLESVEGAVKRADRSLYEAKAGGRNRVCGFDG 563 >UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21PN7_SACD2 Length = 565 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 4/225 (1%) Query: 233 AEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSR 292 + V R IQ+ F Q + S ++K L+ TV + R EE R Sbjct: 345 STVSDHIRTIQNALSTFKQA--QPAPSQSLSAQLKALMDRVKTVEEESEKSRAQLEEQ-R 401 Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 ++ D LT L NR E+ R G PL++ + D+D FK+INDT+GH GD++ Sbjct: 402 YKATHDPLTSLPNREAYNERAFHELHRFKRYGHPLTLAVCDLDHFKKINDTFGHQAGDKV 461 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE 412 L+ V+Q +R+ D+V RYGG+EF++V+ E + +++R+ + KT + + Sbjct: 462 LKLVAQVVSTRLRNVDFVARYGGEEFVLVMPETDAEQAKTVLDKMRAAIAKTPFRFKD-S 520 Query: 413 DIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 + +++S G F G E AD+ALY AK GRN+ + Sbjct: 521 PVTITMSFGIVQFRGEDSVESAFARADKALYEAKANGRNQCVIAP 565 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 5/181 (2%) Query: 273 RNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLII 332 R +++ LL + E +R D LT L NRR L + E A RTG PLS+ I Sbjct: 185 RRHTQRLLILLTQQLAESAR----TDELTGLANRRALCERLEYEQVRARRTGRPLSIAIC 240 Query: 333 DVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLR 392 D+D FK +ND +GH GD +L+ V+ +DN+R D + R+GG+EF+++L E E R Sbjct: 241 DIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDEAGAAR 300 Query: 393 TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNR 452 AE++RS VE + + +G ++++LS G D + I+ AD+ LY+AK +GRNR Sbjct: 301 LAEKLRSLVEAMEY-SYHGIPVSVTLSFGVHTCGPEGDIDYHIRKADQKLYLAKEQGRNR 359 Query: 453 V 453 V Sbjct: 360 V 360 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 72/190 (37%), Positives = 113/190 (59%), Gaps = 4/190 (2%) Query: 271 QIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLS 328 +I +++ I + + EL ++ + +D LT L NR +L REIA A R G P+S Sbjct: 145 KILRSLAFIFSFIVKEELEKKRLLEKAIIDHLTGLYNRFYLEEAGAREIARAKRYGFPIS 204 Query: 329 VLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASEN 388 +++ D+D FK++NDT+GH GD +L K + NVRS+D RYGG+EF+++L Sbjct: 205 LIMFDLDNFKQVNDTYGHQVGDRVLVKFASIVSSNVRSTDMPVRYGGEEFVVLLPHTYPE 264 Query: 389 ETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKR 447 E ++ AERIR EK + GE + L++S G + N LIQ+AD+A+Y AK Sbjct: 265 EAVKVAERIREEFEKFLFR-FEGEVMRLTVSAGISFCNSGECSLGELIQMADKAMYEAKE 323 Query: 448 RGRNRVELWK 457 +G+NR+E++ Sbjct: 324 KGKNRIEVFS 333 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 72/174 (41%), Positives = 104/174 (59%), Gaps = 4/174 (2%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 LF E RH +D LT + NRR +RE + RT PL++L+IDVD FK +NDT+G Sbjct: 501 LFAEARRH-ATIDELTGVWNRRTFFENVRREFQRSQRTLHPLAILMIDVDHFKSVNDTYG 559 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD++LR V++ + +R D + RYGG+EF + L E + + AER+R VE+ Sbjct: 560 HAAGDQVLRGVAERCRNQLRVIDIIGRYGGEEFAVALPETDIHAAGQIAERLRIAVERAP 619 Query: 406 LKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWK 457 G I+L++S+GAA+++ + +I AD ALYIAKR GRN V +W Sbjct: 620 FVTDYG-SISLTISVGAAVYHPDDHVTLDAVIDRADRALYIAKRSGRNSVRVWS 672 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 112/205 (54%), Gaps = 2/205 (0%) Query: 251 QTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLP 310 + N L+ ++ L I ++ I EL +E+S +D LT L NRR Sbjct: 183 EDFMNAGWLSALAIVAGEFLVILSSFCTIWMASDELQDELSE-IARIDPLTGLYNRRAFD 241 Query: 311 TIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYV 370 E + A R+G P ++++ D+D FK +ND +GH+ GDE+LR+ + +++R D V Sbjct: 242 ECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIRKHDVV 301 Query: 371 FRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP- 429 R+GG+EF+++L + L AE++R++ T++ + + LS S G A ++ Sbjct: 302 ARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGDDVCLTLSASFGVAHYDSSDR 361 Query: 430 DYERLIQIADEALYIAKRRGRNRVE 454 ++ ++ AD ALY AK++GRNRV Sbjct: 362 EWSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 72/228 (31%), Positives = 125/228 (54%), Gaps = 3/228 (1%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE 289 SGI + ++ +++ +G+ + + + N + L + I + + + Sbjct: 139 SGIKQGSYLGVPLKNQEGVIIGVLNAHKPMVNGFSKNDLRLFAAVAENVAIAVSNAMTLQ 198 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 +R + D LT L NRR+ F+RE+ + R G +S+++ID+D FKE ND++GH G Sbjct: 199 QTRELIRKDELTGLYNRRYFFERFEREVYRSRRYGRTISLMMIDIDHFKEYNDSYGHLRG 258 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL--K 407 D +L+ +S+ F ++R D V RYGG+EF+++L E S +R AE++R VEK Sbjct: 259 DRVLKTISRIFESSLRKIDVVARYGGEEFLVLLPETSRENAIRVAEKLRQAVEKVDFNED 318 Query: 408 AANGEDIALSLSIGAAMFNGHPDYERL-IQIADEALYIAKRRGRNRVE 454 A N AL+++IG + + L + +AD+ALY+ K +GRN+V Sbjct: 319 APNLGPCALTITIGVSAIPDDANEPILALDLADKALYMGKAQGRNQVC 366 >UniRef50_C9YCE2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCE2_9BURK Length = 382 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 76/235 (32%), Positives = 122/235 (51%), Gaps = 4/235 (1%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLL---QIRNTVSQII 280 +G ++ G + L++ ++ + + +N FL + ++ Sbjct: 146 RGAYFVIGSFLAISAAFLLRTVGALYGEVGIGSITTSNPLQSATFLFVSVALMMVCQGVV 205 Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 + E +E +R D LT L NRRF+ ++A A R G P+SVL+IDVD FK I Sbjct: 206 LMTNERADERNRLLAMQDELTGLSNRRFIMEALALQLAQARRNGKPVSVLMIDVDYFKSI 265 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 NDT+GH +GD +LR ++ + +R+ D R+GG+EF++VL + A +R+ Sbjct: 266 NDTYGHLSGDRVLRNLATSLRSRLRAQDMAGRWGGEEFLVVLPDTDAAGATILAGNLRAE 325 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVE 454 VE + A +G I L+LSIG + + + +I AD+ALY AK+ GRNRVE Sbjct: 326 VEDARWSAQDGRSIPLTLSIGVHTCDSATEELDTVISAADQALYRAKQAGRNRVE 380 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 1/188 (0%) Query: 268 FLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 IR R+L E + +D LT+L NR ++E++ + R + Sbjct: 358 LHQPIRMIGVHANIHSRKLLELELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKDM 417 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 ++ ++D+D FK+IND+ GH GD +L+K++ +R D + R GG+EF I+L E + Sbjct: 418 AMFMMDIDFFKKINDSHGHKIGDIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETNR 477 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAK 446 E L AER+R V +K+ +G + ++SIG + + + + L+ AD+ALY AK Sbjct: 478 AEALEVAERLRLAVADSKVPMKDGLPVQYTVSIGVSSVASADDNIDMLLSRADQALYQAK 537 Query: 447 RRGRNRVE 454 + GRNRV Sbjct: 538 QSGRNRVC 545 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 112/202 (55%), Gaps = 4/202 (1%) Query: 261 NRSLRVKFLLQIRNTVSQIITLLREL--FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIA 318 + S R + ++R+ ++ L E+ + R + D LT NRR+L +RE++ Sbjct: 519 DISERRRSEAELRSANDKLRKQLEEIEKLQVALREQAIRDSLTGCFNRRYLDETLERELS 578 Query: 319 HANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEF 378 + R G PLS+LI+D+D FK INDT+GH GD+ L +++ +R D + RYGG+EF Sbjct: 579 RSRREGYPLSLLILDLDHFKRINDTYGHMAGDQALIVLAETLRAGIRHEDVLCRYGGEEF 638 Query: 379 IIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQI 437 +I++ AE RS++ + ++ N E ++ + S G A + H + L Q Sbjct: 639 VILMPRMPLAIAAERAELWRSKIAEIRVTFGNFE-LSFTASAGVAAYPDHGKMPDELTQA 697 Query: 438 ADEALYIAKRRGRNRVELWKAS 459 AD+ALY AK GRNRV ++ A+ Sbjct: 698 ADQALYTAKNEGRNRVVVYSAN 719 >UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria RepID=A0KRY2_SHESA Length = 581 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 131/267 (49%), Gaps = 7/267 (2%) Query: 194 IDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRL-IQDFDGIFNQT 252 +DII + S L + + L+ + K RH + +GH + +F + Sbjct: 302 VDIIGALRYSSSLAALMMLTTLSVTISLVIK-RHPIAKYFLLGHCLFVGFSGLAVMFYKG 360 Query: 253 MRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE-----EVSRHEVGMDVLTKLLNRR 307 L++ + V +L+ I +R L E E +++ D LT L NRR Sbjct: 361 RAEFSYLSSHGVGVGIMLEALVLALIIAYRIRLLEEIKASQEELKYQAATDSLTHLFNRR 420 Query: 308 FLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS 367 +R A+ T P++V+I D+D FK +ND +GH GD+++ ++ + R Sbjct: 421 HFHKEAQRIYMQASVTQQPMAVIICDIDLFKRVNDKYGHLMGDQVIIDIATTLKQHARKC 480 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG 427 D V RYGG+EFI++L + S E + AERIRS V + A E ++LS+G A + Sbjct: 481 DIVARYGGEEFIMLLHDVSLTEAHQCAERIRSAVAELSFMAETQEAFTVTLSLGVAAVDF 540 Query: 428 HPDYERLIQIADEALYIAKRRGRNRVE 454 E I++AD+ALY AK +GRN V+ Sbjct: 541 VHPLEHAIKLADDALYRAKHQGRNNVQ 567 >UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM04_9GAMM Length = 291 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 12/176 (6%) Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 HE D LT L NRR + E+A + R G PLSV+++D+D+FK IND GH GD Sbjct: 104 LEHESITDPLTGLFNRRHMDRRLDEEVARSRRYGQPLSVVMLDIDEFKGINDRLGHLAGD 163 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 IL ++Q N+R D R+GG+EF+++ ++ L+ AE++RS + +T + Sbjct: 164 YILESIAQRLRQNLRRVDLAARFGGEEFVVIAPHTDQDAALQLAEKLRSEIAQTPIILKG 223 Query: 411 GEDIA--------LSLSIGAAMFNGHPDYER----LIQIADEALYIAKRRGRNRVE 454 E + +++S+G A N PD L+Q AD+ALY AK GRNR E Sbjct: 224 HEHVPPCAPDELYVTVSVGVASLNIEPDSRDNADFLLQRADDALYRAKAGGRNRCE 279 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 82/234 (35%), Positives = 118/234 (50%), Gaps = 10/234 (4%) Query: 229 FSGIAEVGHISRLIQDFDGIFNQTMRNTRNLN------NRSLRVKFLLQIRNTVSQIITL 282 FS AE + L+Q F + R N N +L V L ++ ++ L Sbjct: 374 FSEEAERKTKNLLLQHELEEFKREAEIYRLKNVELVSANENLEVTTL-ALKEANAENQLL 432 Query: 283 LRELFEEV--SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 L L E+ V D LT L NRR F+ E R PLS+ + D+D FK++ Sbjct: 433 LERLREQAETLERLVTYDGLTGLANRRHFDEQFEYEFRRTRRYKRPLSIAMSDIDFFKKV 492 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 ND + H GDE+L+KV+ F +NVR+ D V RYGG+EF+ + TE ++ +R AE+IR Sbjct: 493 NDNFSHQVGDEVLKKVASIFRENVRAGDLVARYGGEEFVFIFTETNKESAIRAAEKIRKA 552 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +E + + +++SIG A G + LI AD LY AKR GRN+V Sbjct: 553 IEDYDWSNVH-AGLKVTISIGVAEDAGFDGCDELIAAADSKLYEAKRNGRNQVR 605 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 66/165 (40%), Positives = 101/165 (61%), Gaps = 3/165 (1%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 + + D LT L NRR + +E+ R TP+S+ +IDVD FK+INDT+GH GD Sbjct: 415 QSQAITDNLTGLANRRHFLQVLHQEMERNRRYHTPVSIAMIDVDHFKQINDTFGHIAGDY 474 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +LR++++ +R D + RYGG+EF ++L E + + L+ ER+R+ + T + +G Sbjct: 475 VLREIARRCRQQLRDVDVLARYGGEEFGLILPETTYEQALKATERLRTVLATTPIMI-DG 533 Query: 412 EDIALSLSIGAAMFNG--HPDYERLIQIADEALYIAKRRGRNRVE 454 I ++SIG A F+ +PD LI AD ALY+AK++GRNRV Sbjct: 534 RQINPTISIGVASFHPTVYPDPSSLIADADRALYLAKQQGRNRVC 578 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 100/183 (54%), Gaps = 3/183 (1%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + + L R + D LT+L NRR T + E+ R PL+++++D+D FK+ Sbjct: 336 LAVKNALLFREMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLMMLDIDYFKQ 395 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 IND +GH GD +LR+++ + +R++DY RYGG+EF+ +L E + AER+R Sbjct: 396 INDRFGHQAGDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQARVLAERLRK 455 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWK 457 +E + +G+ I ++SIG F + L++ AD ALY+AK GRN V + Sbjct: 456 NIESRVFRH-HGKTIQATVSIGLTGFKPGALTPRDELVREADAALYLAKANGRNVVCTFA 514 Query: 458 ASL 460 S Sbjct: 515 GSC 517 >UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM68_FIBSS Length = 566 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 8/232 (3%) Query: 226 RHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRE 285 F + I RL + F+ + R + LN R +++ ++ ++ Sbjct: 330 IEEFKARSSQDEIGRLAKVFNQMHATIKRQIQELNAH--RDMLEKEVKERTYELEQANKK 387 Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L D LT+L NRR + ++E+ ANR S++ ID+D FK++NDT+G Sbjct: 388 LD-----LISRTDELTQLPNRRDMHRTIEKEVDRANRFKKAFSIIFIDIDHFKDVNDTYG 442 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD +L+ V+ +R D + RYGG+EF+ +L E + AER R ++E Sbjct: 443 HAAGDAVLKSVASTIRSLLRKYDVLARYGGEEFLTLLPETELKDAAHVAERFRKQIENQT 502 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 + G++I +++++G A F+ ER IQ+AD+ALY K GRNRV LW Sbjct: 503 IF-FGGQEIKVTITLGVAQFDSGLGAERCIQLADKALYEGKEHGRNRVILWT 553 >UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GW9_DECAR Length = 469 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 72/187 (38%), Positives = 103/187 (55%), Gaps = 1/187 (0%) Query: 270 LQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSV 329 LQ + LRE EE R D LT L N R L E+ A R G PLS+ Sbjct: 280 LQDVTERRRAEEALRE-SEERYRSLSQTDSLTGLFNSRHLHEQLPNELERAGRYGRPLSL 338 Query: 330 LIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENE 389 L++D D FK +ND +GH GD++L+ ++ A +R SD+ FRYGG+EF+++L E + Sbjct: 339 LVLDCDNFKCVNDRYGHLGGDKVLQSLATAIGHCLRRSDFAFRYGGEEFVVLLPETAIQA 398 Query: 390 TLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRG 449 L AER+RS+ + A +G+ I ++SIG A L++ ADEA Y+AK RG Sbjct: 399 ALAIAERLRSQFASIETPAPSGDAICCTVSIGVAECVPGESEASLVRRADEACYMAKARG 458 Query: 450 RNRVELW 456 +N V + Sbjct: 459 KNCVVMA 465 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 62/180 (34%), Positives = 101/180 (56%), Gaps = 2/180 (1%) Query: 276 VSQIITLLRELFE-EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 ++++ + LRE ++ D LT L NRRF +RE+ R T S +I+D+ Sbjct: 113 LARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRNETDASFIILDI 172 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FK++ND +GH GD++L +++ F + R D R+GG+EF+I L + L A Sbjct: 173 DHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEGALLVA 232 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 ER R +VE+ G + +++S+G + N + E +++ AD+ALY AK+ GRNR E Sbjct: 233 ERTRKKVEELSFNTEKG-PLHVTISLGVSSANENTTLEDMLKRADDALYQAKQNGRNRTE 291 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 5/213 (2%) Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 GI + L R+ + +S LRE + + D LT L NR Sbjct: 1133 GILYISSPQLGQLTEAKQRLALTVAEHLALSLANLKLRETLSQ----QSIRDALTGLFNR 1188 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 R++ +REI A R P+ ++++D+D FK NDT+GH GD +LR++ ++R+ Sbjct: 1189 RYMEESLEREIHRAQRHQRPMGIIMLDIDHFKHFNDTFGHEAGDAVLRELGIFLQRSIRA 1248 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 SD RYGG+E +++L +AS +T + AE+IR V+ +++ + A+++S+G A F Sbjct: 1249 SDIACRYGGEELMLILPDASLADTKQRAEQIRHDVKGLQIEYHHKLLDAIAISVGVAAFA 1308 Query: 427 GHP-DYERLIQIADEALYIAKRRGRNRVELWKA 458 H + LI AD ALY AK +GR+RV + Sbjct: 1309 EHGSTAQELIAAADRALYQAKAQGRDRVVTASS 1341 >UniRef50_B7K273 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Cyanobacteria RepID=B7K273_CYAP8 Length = 308 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 4/214 (1%) Query: 243 QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE--EVSRHEVGMDVL 300 D + + + + + +V LL T ++ + ++L E + + D L Sbjct: 92 NDKEHLIKAFEQGAVDYVTKPFKVPELLARVKTHVELKQVQKQLQEACQTMKKLADTDEL 151 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 T + NRR L +RE + R GTP +L+IDVD FK IND +GH GD+ ++ V + Sbjct: 152 TGIANRRCLLEFAQREFQRSLRYGTPFCLLMIDVDHFKNINDKYGHPNGDKAIQWVVEII 211 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 +R D+ R+GG+EFI+VL + + L AERIR + L + + L+ SI Sbjct: 212 KLGLREVDFFGRFGGEEFIVVLPQTALGGALEVAERIREAIASQPLTL-EQDTVTLTASI 270 Query: 421 GAAMFNGHP-DYERLIQIADEALYIAKRRGRNRV 453 G A + G +IQ AD++LY AK +GRN+V Sbjct: 271 GVATYTGEDKTVVGMIQRADKSLYQAKAKGRNQV 304 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 4/171 (2%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R +E R D LT L NRR L + E+ R G PL+++++D+D FK INDT Sbjct: 322 RTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKRINDT 381 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH++GD +L +V++ +RS+D + RYGG+EF+I E + AE+IRS + Sbjct: 382 FGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRSSIAM 441 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 A+++S+G ++ D LI+ AD ALY AK GRNRV Sbjct: 442 FSFPTVG----AVTISVGISLLESKDDINALIKRADTALYAAKEMGRNRVV 488 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 4/218 (1%) Query: 239 SRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMD 298 S D DG+ + + ++ + L+ V + + + + + D Sbjct: 281 SERKTDLDGLLDVMSEISSGASDEISYICEALKDMILVLKDKMENIQSYSDRLEYLANRD 340 Query: 299 VLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQ 358 LT L NRR + I E ++R G+ LSV+++D+D FK +ND +GH GD +L ++ Sbjct: 341 SLTGLWNRRKMDQILLSETERSSRYGSSLSVVMVDIDHFKNVNDNFGHEVGDTVLSSIAA 400 Query: 359 AFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSL 418 + R+ D V R+GG+EF++VL E L AER+RS VE +DI ++ Sbjct: 401 LMKNCTRAGDSVGRWGGEEFLVVLPETDVKGALEYAERMRSAVEDNVFH----DDIRITS 456 Query: 419 SIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 S G + + ADEALY AK +GRNRVE+ Sbjct: 457 SFGVTQYRSGEPVNEFVARADEALYDAKEKGRNRVEIC 494 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 6/188 (3%) Query: 270 LQIRNTVSQIITLLRELFE--EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 L I + QI L +EL E + H V D LT++ NR + + E+ R G L Sbjct: 502 LAIGASAYQIEQLNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDL 561 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 +V+++D+D FK +ND +GH+ GD++L+ +S+A + +RSSD R+GG+EF+I+ E Sbjct: 562 AVILLDIDHFKRVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDL 621 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKR 447 + AER+R R+ + ++ S G A D L++ AD ALY K Sbjct: 622 ESANQLAERLRRRLSNLQFDKVG----QVTASFGVAELLPSEDRNSLVKRADNALYQVKE 677 Query: 448 RGRNRVEL 455 GRN VE+ Sbjct: 678 SGRNSVEV 685 >UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepID=C5UZW0_9PROT Length = 599 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 76/232 (32%), Positives = 119/232 (51%), Gaps = 4/232 (1%) Query: 229 FSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLR-VKFLLQIRNTVSQIITLLRELF 287 SG +E S + D + + M++TR + +L+ + LL R V + +L Sbjct: 369 ISGYSEKIAQSSNLNDLGHLLDDIMQDTRVIQASALKSHEELLDSRKQVESAEEKISKLE 428 Query: 288 EEVSR--HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 +E+S V D LT LNRR L F RE +R+ L + ++D+D FK +NDT G Sbjct: 429 KELSEVSELVHQDQLTGALNRRGLDAAFDRESRRVDRSHESLCIALLDIDNFKRLNDTMG 488 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD+ L + + +R SD V RYGG+EF+++L + + E T ER++ + K Sbjct: 489 HQVGDKALIHLCHVIKEALRPSDSVARYGGEEFVLILPDVTLAEAALTVERLQRELTKQF 548 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 N + I ++ S G A + E LI AD+A+Y AK+ G+NRV + Sbjct: 549 FMHEN-DRILVTFSAGVAQLAPNESQEELIGRADKAMYQAKQTGKNRVVVAN 599 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 68/168 (40%), Positives = 95/168 (56%), Gaps = 3/168 (1%) Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 D LT+LLNRR L E+ A R + L++L+ID+D FK++NDT+GH GD Sbjct: 324 LEQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVGD 383 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 ++LR V Q +R SD RYGG+EF+++L E + + AERIR +E+ + Sbjct: 384 DVLRDVGQLLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFARDS 443 Query: 411 -GEDIALSLSIGAAMFNGH--PDYERLIQIADEALYIAKRRGRNRVEL 455 E + L+ SIG A+F + E L AD ALY AK GRNRV + Sbjct: 444 MAEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNRVRM 491 >UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UW14_9AQUI Length = 218 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 66/159 (41%), Positives = 93/159 (58%), Gaps = 4/159 (2%) Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 D LT L NRR + E A R GTPLSV +ID+D FK INDT+GH GDE+L+ Sbjct: 61 ASTDPLTGLPNRREIMNFLDFEFNRAKRNGTPLSVAVIDLDDFKFINDTYGHVAGDEVLK 120 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 ++ N+RS+D V R+GG+EF++V+ + N ++ ER+R VE+T + Sbjct: 121 SLASLIRRNLRSTDMVGRFGGEEFVVVMPDTPLNTAVKVMERLRRVVEETYFEPIG---- 176 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 ++S+S+G A D L+ AD LY AKR G+NRV Sbjct: 177 SVSISVGVAQLREGDDVSNLLSRADGKLYQAKREGKNRV 215 >UniRef50_Q6AMZ3 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AMZ3_DESPS Length = 330 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 5/183 (2%) Query: 275 TVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 + + + E + + + + D L NR+ + E+ ANR P S+++ID+ Sbjct: 122 ALLEAKATINEQLD-IVKKQASTDPLLGCYNRKMFNDLLATEVMRANRHNHPFSLIMIDI 180 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FK +NDT+GH GDE+L+ +S ++R SD R+GG+EFII+L E A Sbjct: 181 DNFKSVNDTYGHLVGDEVLKGLSSLTAKSIRESDLFARWGGEEFIILLPETYLTGAAVVA 240 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 E+IR + NG + S G + F+ + E LI AD+ALY AK G+N+V Sbjct: 241 EKIRLNIANY----DNGTAGKRTCSFGVSEFSIGTNPEILINNADKALYAAKGNGKNQVM 296 Query: 455 LWK 457 L++ Sbjct: 297 LYR 299 >UniRef50_B0TV39 Diguanylate cyclase n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TV39_SHEHH Length = 295 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 4/175 (2%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 +L EE + DVLT L NR L ++ EI R PLS++++D+D FK +ND Sbjct: 125 AKLLEEKALKLAKTDVLTGLANRLELDSVLSYEIERLKRFQHPLSIIMLDLDHFKTVNDN 184 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GD+ L +++ +N R D V R+GG+EF+I+ E N ++ AE+ R +E+ Sbjct: 185 YGHLLGDKCLINIAKMMKNNFRLIDTVGRWGGEEFLIICPETDFNGAIKLAEKFRRLIEE 244 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 ++ S+G F +E L+ AD+ALY AK+ GRNRVE ++A Sbjct: 245 HIFPEVK----RITGSLGVTSFIEGDTHETLVNRADKALYKAKKAGRNRVEAFEA 295 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 1/179 (0%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 I L +E + + D LT L NRR+L ++EI A R + +++ID+D FK Sbjct: 1071 IALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYSVGIVMIDIDHFKR 1130 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 ND +GH+ GDE+L+ V++ ++RSSD RYGG+E ++L EAS ++T +E+IR Sbjct: 1131 FNDQFGHDAGDEVLKTVARLLQGSIRSSDIACRYGGEELTLILPEASLSDTQARSEQIRY 1190 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWK 457 +E +L N +++ S G A F H E +++IAD ALY AK GRNRV Sbjct: 1191 MIEHLQLHYENQSLGSITASFGVACFPEHGETLEAVLRIADTALYQAKALGRNRVVCAT 1249 >UniRef50_A1K902 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K902_AZOSB Length = 610 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 142/315 (45%), Gaps = 20/315 (6%) Query: 148 MEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLG 207 + V+ AFT ++ R+ + +++ + + + + D Sbjct: 311 LSVLAEAFTGELDIRMLDEVERRL----RDVIDKQSHLKRQLSDAQQRLKTMLAGFIDRL 366 Query: 208 SSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVK 267 +S + +F A + I + + Q +R TRN + R Sbjct: 367 ASFSNTTGEF--------HDVLDQCATRISAAHDISELSDVVEQMLRETRNTQESARRSG 418 Query: 268 FLL-----QIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 L Q+ + I+ L REL E + V D LT LNR+ L REIA A R Sbjct: 419 EELAELREQVESANQHILRLQRELDE--TSELVRHDPLTGALNRKGLDEALAREIARARR 476 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 G+PL + ++DVD FK++NDT+GH GD+ LR + + VR D V RYGG+EF+IVL Sbjct: 477 HGSPLCLALLDVDNFKQLNDTYGHRAGDDALRHLFSVIREAVRPQDAVGRYGGEEFLIVL 536 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 + + R++ + + + AN + + ++ S G A + D + I AD+A+ Sbjct: 537 PDTDTEQAAAVVVRLQRELTR-RFFLANSQKLLITFSAGIARLHADEDPQLAIDRADKAM 595 Query: 443 YIAKRRGRNRVELWK 457 Y AKR G+NRV + Sbjct: 596 YAAKRAGKNRVLIAA 610 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 4/190 (2%) Query: 265 RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 VK LL T + L E + + D LT L NRR+L K+E+ A R Sbjct: 295 EVKQLLATNVTRHISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAKRKE 354 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 L +++IDVD FK +NDT+GH+ GD++L+K+ ++R SD RYGG+E ++L E Sbjct: 355 RSLGIIMIDVDHFKNVNDTFGHDKGDQVLKKLGGFLQRHIRGSDIACRYGGEELTLILPE 414 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALY 443 AS T + AE++R V+ L + L++S+G A F H + L++ AD+ALY Sbjct: 415 ASLENTRQRAEQLRQAVKNLDLDLCDH---TLTISVGIACFPEHGYSGKALLKTADQALY 471 Query: 444 IAKRRGRNRV 453 AK++GR+RV Sbjct: 472 QAKQQGRDRV 481 >UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepID=A1WM32_VEREI Length = 612 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 124/235 (52%), Gaps = 9/235 (3%) Query: 228 YFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELF 287 F +A++ +S+ + D + ++ R+ L ++ ++ + ++ E Sbjct: 374 EFGLLADMVLLSQALADRVKLLSEQ-RDAAELREIEQKIATTALLKQANEDLERMVLERT 432 Query: 288 EEVSR------HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 E++R H +D+LT + NRR+ + E A R LSV++ID+D FK++N Sbjct: 433 SELARARDEAEHFARIDMLTGVANRRYFEEVATMEFARTQRGQQALSVILIDIDLFKQVN 492 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 D +GH GD ++R V++ ++VR SD+V R GG+EF ++L + TAER+R R+ Sbjct: 493 DRYGHAAGDAVIRAVARLAKESVRESDFVARIGGEEFSVLLPGIGQAPAFATAERLRERI 552 Query: 402 EKTKLKAANGEDIALSLSIGAAM-FNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++ +G + + S G + P + L++ AD+ALY AK+ GRN+V + Sbjct: 553 AACVVEH-DGHSLGFTASFGVSEQVADDPGFSSLLRRADQALYAAKQAGRNQVVV 606 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 4/173 (2%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ FEE+ + D LT + NRRF + ++EI R S+++ D+D FK +ND Sbjct: 524 RKRFEELLYRQSITDPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFKNVNDR 583 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GD +L+ V+ +R +DY R+GG+EFII+L E S N AE +R ++ + Sbjct: 584 FGHAAGDMVLKSVADTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAEELRKKISE 643 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 T+L ++ S G + + ++ D ALY AK GRN V++ Sbjct: 644 TELDGIG----KVTASFGVTEYRNTDTVDTVLLRVDGALYEAKGSGRNCVKIA 692 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 18/215 (8%) Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 I+ FD IF Q + L L+ T+ + R FEE+ +D LT Sbjct: 289 IKMFDTIFWQNI----------LLGSILILFLFTILFYFAISRIKFEEM----ATVDKLT 334 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 L NR I + EI ++R PLSV++ D+D FK+INDT+GH+ GD +LR++++ Sbjct: 335 GLFNRHKFQEIAEIEIKRSHRHKRPLSVILFDIDHFKKINDTYGHDIGDVVLRELAKIIK 394 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 N+R DY R+GG+EF+I+ E E + AE++R VE +++S+G Sbjct: 395 QNIRKYDYAIRWGGEEFLILTPETDEKQAFAMAEKLRKAVESHTFPEVG----KVTISLG 450 Query: 422 AAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 A + + ++ I+ AD ALY +K GRN+ + Sbjct: 451 VASVDPNESIDQAIKKADNALYGSKLGGRNKTTVA 485 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 2/173 (1%) Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 LL + D LT+L NRR + + +RE + R PLSV+I+D+D FK++N Sbjct: 212 LLNARLMQSLYSSSMKDSLTQLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHFKQVN 271 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 D GH TGD++L+K+ N+R++D FRYGG+EF+IVL + E + AE++R + Sbjct: 272 DQHGHQTGDQVLKKIGIILQHNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKLRIII 331 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 E+TK + L+ S G + +I+ ADEALY AK GRN V Sbjct: 332 EETKF--WRQQSANLTASFGLSELWAEDKVPSMIKRADEALYYAKENGRNTVC 382 >UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SB7_SULDN Length = 487 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 20/242 (8%) Query: 215 ADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRN 274 + FGL KG + + E I + F G+ +Q + ++ K +N Sbjct: 262 SIFGL----KGTTIY--LQEFIAILVITTLFFGVLHQEINESK--------AKLEELNKN 307 Query: 275 TVSQIITLLRELFE--EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLII 332 + + + L E + + D LT + NRR + +E + R L++++I Sbjct: 308 LENMVKEKTKSLMEANQKLNNLASKDSLTNIFNRRIIDEFISKETIKSKRYNNSLALIMI 367 Query: 333 DVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLR 392 D+D FKE+ND +GH GDE++ + N+R SD R+GG+EFII+L E + N+ Sbjct: 368 DIDHFKEVNDKYGHQVGDEVILSLVDIISKNIRESDIFGRWGGEEFIILLPETNLNQATI 427 Query: 393 TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNR 452 A+ IR +V++ + + ++S+G + FN + D I+ D+ALY AK GRNR Sbjct: 428 VAQNIRKKVQEYRFDKVGQK----TISLGVSEFNSNDDSTVFIKRVDDALYKAKATGRNR 483 Query: 453 VE 454 V Sbjct: 484 VV 485 >UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D095_MYXXD Length = 347 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 15/227 (6%) Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL---------FEEVSR 292 ++ + + + ++ S RVK +L+++ ++ REL E Sbjct: 116 VEGLELGADDYLVKPFDMLELSARVKSMLRLKALQDALVEKNRELDRANKELAARREELL 175 Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 D LT L NRR E A + R G PLS++++D+D FK IND++GH GD + Sbjct: 176 ALTRTDALTGLSNRRAFEERLNDEFARSRRYGAPLSLVMLDIDHFKRINDSFGHPFGDHV 235 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG- 411 L+ V+Q +R D + RYGG+EFI +L E + LR ER+R + +L+ G Sbjct: 236 LKAVAQTARARLREVDLLARYGGEEFIALLPETGPADALRVCERVRDAIAALELEHVGGS 295 Query: 412 ---EDIALSLSIGAAMFNGH--PDYERLIQIADEALYIAKRRGRNRV 453 + + L+ S+G A P E L++ AD +LY AK GRNRV Sbjct: 296 GKPQCVRLTASLGVATVPSGDLPSAEALLRAADASLYAAKGAGRNRV 342 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 9/255 (3%) Query: 201 LLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLN 260 L L S L L+ F W + H F E+ H + D + + + Sbjct: 81 WLSRKLSSVLQLNTPSFCSW--QQRHHLF----ELPHTRPITTDSEFMAQNCTFLPIETD 134 Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 + L++ L++ E++ +D LT++ NRR ++E A A Sbjct: 135 VNGKHICILIEDVTDACHYQMQLQKTLAEIA-QISRIDGLTQVYNRRHWQDSLEQEYAKA 193 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 R LS++++D+D FK +ND +GH GD +L +VS +R D RYGG+EF I Sbjct: 194 RRHDKKLSLIMLDLDHFKLLNDNYGHQGGDMVLIEVSALISTLLRVEDTFGRYGGEEFAI 253 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIAD 439 +L E + A+RI + T N + I +++S+G A + YE LI AD Sbjct: 254 ILPETDSAGAIELAQRICRIIATTPF-TYNDQVIKVTVSLGVAQLSSKESNYEELITQAD 312 Query: 440 EALYIAKRRGRNRVE 454 ALY AK +GRN+V Sbjct: 313 SALYQAKSQGRNQVC 327 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 5/209 (2%) Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLR-ELFEEVSRHEVGMDVLTKLLN 305 G+ R + R ++ R+ Q L E E+ + D LT + N Sbjct: 223 GLLMPISFACRAVFKNETRDGAVIAFRDITVQKKNLQSLEGINELLEKQASTDALTGIFN 282 Query: 306 RRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVR 365 R EI A R LS+++ D+D FK++ND++GH +GD +L+ +++ N+R Sbjct: 283 RMKFNQTLTSEIKRAKRYRVALSLILFDIDHFKQVNDSYGHLSGDTVLKHLARLVASNLR 342 Query: 366 SSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF 425 D R+GG+EF+I E S ++ AE++RS++E A +++S G A F Sbjct: 343 EIDIFARWGGEEFVIQAPETSLESAIKLAEKLRSKIENYVFPAPK----KITVSFGVATF 398 Query: 426 NGHPDYERLIQIADEALYIAKRRGRNRVE 454 + L+ ADEALY AK GRN+V Sbjct: 399 RSSDNDITLVNRADEALYRAKEGGRNQVV 427 >UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR80_ACIC1 Length = 710 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 66/173 (38%), Positives = 96/173 (55%), Gaps = 2/173 (1%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + + L + + D LT L N R+L EI A R PL++L+ID+D+FK+ Sbjct: 494 VAIENVLLHQEAERLSLTDALTGLWNYRYLTMTLGHEIERATRFRRPLALLMIDLDRFKD 553 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 IND GH GD +L ++++ + VR D V RYGG+EF+++L E + TAER+R Sbjct: 554 INDRHGHQAGDAVLVELARRLHTTVREVDTVARYGGEEFVVILPETDADGAAHTAERLRQ 613 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRN 451 V T DI ++ SIG A+F H L++ ADEALY+AK GR+ Sbjct: 614 AVRGTPF-HVEQMDIPVTASIGIAVFPRHGSSAAILLRAADEALYVAKHSGRD 665 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 4/189 (2%) Query: 273 RNTVSQI-ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 R+ V+ + + L L + + D LT++ NR EI R LS+L+ Sbjct: 302 RSAVNHLGLALRNALIFKEVKLRADRDGLTRIYNRHSFDERLIYEIKRRRRYNHDLSLLM 361 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 +D+D FK++NDT+GH GD +LRKV + + R++D RYGG+EF+++L SE Sbjct: 362 VDLDHFKQVNDTYGHKAGDMVLRKVGEILTETFRTTDLAARYGGEEFVVLLPHTSEEAAW 421 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY--ERLIQIADEALYIAKRRG 449 + AERIR ++ + +G + +++ SIG A + L+ AD+ALY AK G Sbjct: 422 KLAERIRESIQGCVFR-FDGHEFSVTASIGVASVEAGALTRDDDLLIKADKALYKAKNNG 480 Query: 450 RNRVELWKA 458 RN V + + Sbjct: 481 RNMVVISRP 489 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 63/174 (36%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 E R D +TKL NRR+ + K EI + R PLS+++ DVDKFK +NDT+GH+ Sbjct: 664 ENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMFDVDKFKAVNDTYGHD 723 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GD +L+ ++ +R D + R GG+EF + L E + AER+R +E+ ++ Sbjct: 724 VGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAMLLAERLRVVLEEASVE 783 Query: 408 AANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWKASL 460 +G + ++S+G A+ + D + L++ AD ALY AK GRNRVE + + Sbjct: 784 LPDGGIVDFTVSLGVAVLDRSITDVDVLLKHADLALYAAKENGRNRVEAYTQMM 837 >UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4Y784_SHEPC Length = 368 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 5/236 (2%) Query: 223 HKGRHYFSGI-AEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 ++G FSG AE G + D + + + + + + + Q N + Q + Sbjct: 133 NQGTADFSGTLAEFGIKLQSNSDINTLNQLVDGVMDEMQSLLINNQNMEQSLNAMGQEVQ 192 Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 L+ E +S D LT L NRR + I A + S+LI+D+D+FK+ N Sbjct: 193 HLKSEMENLS-LAAMTDQLTSLYNRRAYEIAIQDHIHRAQEQHSRCSLLIVDIDRFKQFN 251 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 DT+GH GD++L V+ A VR D+V RYGG+EF+++L ++ L+ AE +R R+ Sbjct: 252 DTYGHQIGDKVLAYVALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRERI 311 Query: 402 EKTKLKAANGEDIA---LSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + L + ++ +++SIG A D E L AD+ALY AK GRN V Sbjct: 312 SERHLTIGKDKKLSLGAITVSIGLASLQEGDDAETLFSRADKALYEAKSDGRNCVR 367 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 4/239 (1%) Query: 225 GRHYFSGIAEVGHISRL-IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 H I+ I L + F I ++ S + T+++ + L Sbjct: 836 CPHVKGKISSGESIFCLPLAAFGEILGHLQFEQMVTHDNSCVDSKAPPLAETIAEQLALA 895 Query: 284 --RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 E R E D LT L NRR+L F++E+A A R+G + +L++D+D FK N Sbjct: 896 IANLQLRETLRQENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYFKRFN 955 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 D +GH+ GD +L++V++A + VR+SD V R+GG+E I++ AS + R A++IR + Sbjct: 956 DEFGHDAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQIRQAI 1015 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKAS 459 + + +L++SIG A F + LI+ AD +LY AK GRN V + + S Sbjct: 1016 AQLIISYHEQTLPSLTISIGVAAFPESGLASDTLIKSADTSLYQAKAAGRNCVVVHQPS 1074 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 2/240 (0%) Query: 221 FNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQII 280 +G H A + + + + R + L Q + + Sbjct: 393 LGEEGLHCRHSSASHSTLCVPMLAQGETVGLLHLEAGSAAPLTRRQERLAQTVAETAAL- 451 Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 ++ E R + D LT L NRR+L F+RE+ A R+ P++V+++D+D FK Sbjct: 452 AIVNLRLRESLRQQSIRDPLTGLYNRRYLEESFERELHRAQRSDDPIAVIMLDIDHFKHF 511 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 ND+ GH GDE+LR + Q +R+ D RYGG+EF +V + ++ R A+++R Sbjct: 512 NDSHGHEAGDELLRALGQLLSGCIRAEDVACRYGGEEFAMVFPGMTLDQATRWADQLRHT 571 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKAS 459 VE T+ + +S+S+G A F H LI+ AD ALY AKR GRNRV + Sbjct: 572 VESTQFASRGEALEQVSVSLGVAAFPQHGRHLADLIRAADAALYRAKREGRNRVITADGA 631 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 8/191 (4%) Query: 265 RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 RV L+I+ + R+L E D LT L N R+ ++ A R Sbjct: 114 RVNTHLRIKELYESLQETNRQLQE-----LANRDGLTGLYNHRYFQDAMTKDFQRAMRYH 168 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 LS ++ D+D FK+ NDT+GH TGD +L +++ D++R +D RYGG+EF +VL Sbjct: 169 ESLSCVLCDIDFFKKFNDTYGHQTGDIVLSTLARIVEDSLRDTDLAARYGGEEFALVLYH 228 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF--NGHPDYERLIQIADEAL 442 AER+R VE+ + AN +++++S+G A + PD++ LI+ AD+AL Sbjct: 229 TPAAAAFMVAERLRESVEQHEF-IANDLSLSVTISVGVATYPHPDIPDHKTLIECADKAL 287 Query: 443 YIAKRRGRNRV 453 Y AK GRN+V Sbjct: 288 YKAKENGRNQV 298 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 74/179 (41%), Positives = 101/179 (56%), Gaps = 1/179 (0%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + L E RH +D LT + NRR T+ ++ I++A RT + L VL+ID+D FK+ Sbjct: 258 LMLTNEHITRELRHLAEVDPLTNVFNRRAFLTLLEKAISNAQRTQSGLPVLVIDLDHFKK 317 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 INDTWGH +GDE+LR +R D + R GG+EF I L AS + AER+R+ Sbjct: 318 INDTWGHQSGDEVLRHFVALANGCLRKEDVMGRLGGEEFAIFLPNASSEGSQAVAERLRA 377 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 V G IAL++SIG + G + ++Q ADEA+Y AK RGRNRVE Sbjct: 378 LVAHHPAMTGRG-PIALTVSIGVTQYGGGETSDFVLQRADEAMYRAKERGRNRVETLSP 435 >UniRef50_A8UT68 Putative uncharacterized protein n=2 Tax=Aquificaceae RepID=A8UT68_9AQUI Length = 620 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 67/181 (37%), Positives = 106/181 (58%), Gaps = 3/181 (1%) Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 L + E+ + + +D LT L NRRFL I + A R GT L +L+ID+D FK+IN Sbjct: 435 LESKSLMELLQQQSYIDQLTGLYNRRFLDEIADKLSAQVKRRGTSLGILMIDIDYFKQIN 494 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 D +GH+ GD +L++++ +VR +DYV R+GG+E +++L + E + AE+IR + Sbjct: 495 DKYGHDVGDRVLKEIASIIKSSVREADYVIRFGGEEILVLLVDVREGTAKKVAEKIRRAI 554 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPD--YERLIQIADEALYIAKRRGRNRVELWKAS 459 E ++ + G I ++SIG + F D + + I+ AD ALY AK GRNRV + Sbjct: 555 ENKVIEISGG-VIKKTVSIGVSEFPKDCDGKFWQCIKFADVALYRAKEEGRNRVVRFTPE 613 Query: 460 L 460 + Sbjct: 614 M 614 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 7/181 (3%) Query: 280 ITLLRELFEE-VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 + R++ + + E D L + NRR+L K E A PLS+ +ID+D FK Sbjct: 95 LRTTRDIMQNYALKQENITDSLMGIFNRRYLDRRLKDETERALNYSQPLSIFLIDIDHFK 154 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 ++ND +GH GD +L+ ++Q ++R SD + R+GG+EF+++L ++ + AER+R Sbjct: 155 QVNDNYGHQVGDLVLKNIAQLIKHSLRESDVLARFGGEEFVVILPRTKDSTSYTLAERLR 214 Query: 399 SRVEKTKLKAA-----NGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNR 452 VE +L + I++++SIG A N D + LI+ AD ALY AKR GRN+ Sbjct: 215 HVVEDFQLTLPEESDKDSLSISVTVSIGVAGLNAQCKDCQCLIENADRALYQAKRNGRNQ 274 Query: 453 V 453 V Sbjct: 275 V 275 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 5/175 (2%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 IT +EL E H+ D LT NR + T+ +E A R P S+L++D+D FK Sbjct: 618 ITRQKEL-EAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDIDHFKR 676 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 INDT+GH GDE+LR + A +R +D + R+GG+EF+++L AE++R Sbjct: 677 INDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVAEQLRE 736 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +V T +++S+G A ++ ADEA+Y+AK+ GRNRV Sbjct: 737 QVTATAFPCVG----LVTISLGVAECRPGESIRDWVKRADEAMYVAKKGGRNRVV 787 >UniRef50_B9L6Y1 Diguanylate cyclase n=1 Tax=Nautilia profundicola AmH RepID=B9L6Y1_NAUPA Length = 469 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 74/228 (32%), Positives = 122/228 (53%), Gaps = 5/228 (2%) Query: 229 FSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE 288 F + E+ HI LI+ F + + T + + ++ + N + I+LL + E Sbjct: 246 FDKLNEMNHILYLIK--TQKFEEIPKKTPPKDELDVYKNNIIDVANDIKTYISLLTQKVE 303 Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 + S + D LT++ NRRFL K + T + ++++D+D FK+INDT+GH+T Sbjct: 304 KYS-DKAYKDGLTEIFNRRFLEEKAKELFLKYKLSNTQVGIIMLDIDDFKKINDTYGHDT 362 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD +L + +R +D RYGG+EF+I+L ++ T + AE+IR VEK K+ Sbjct: 363 GDLVLISLVSTIKQIIRKNDIFIRYGGEEFVIILPNSNIENTYKIAEKIRKEVEKIKIHI 422 Query: 409 ANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVEL 455 + + + ++SIG + + I+ AD LY AKR G+NRVEL Sbjct: 423 GD-KHFSFTISIGISEIHKDDSSIYEAIKRADINLYKAKRNGKNRVEL 469 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 8/220 (3%) Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 I+ + + + + RV+ L+++ ++ + E+ R D LT Sbjct: 94 IRGLEQGASDFVTKPFDTGELVARVRVQLKMKGLQDEL-----KRSNEMLRTLSITDPLT 148 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 L NRR L + +E ++R G PLS++I+D+D FK+INDT+GH GD +L ++ Sbjct: 149 HLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDYFKKINDTYGHQEGDRVLTILADIVR 208 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 +RS D RYGG+EF+++L E E L AER+R V++ + + G + +++S+G Sbjct: 209 RRLRSYDLAARYGGEEFVLLLPETPVQEALSIAERLRLEVQEHVFEGSLGGLV-ITISLG 267 Query: 422 AAMFNGH--PDYERLIQIADEALYIAKRRGRNRVELWKAS 459 A + + L + ADEALY AK+ GRNRVEL + Sbjct: 268 VATYPSSRVESIDSLFRQADEALYRAKQGGRNRVELMAGA 307 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 108/190 (56%), Gaps = 2/190 (1%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 + LL I ++ + L ++ ++ + D LT L NRR + E A R G Sbjct: 232 IGLLLGITYFLTWRLVLNLDMAQKHLKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGE 291 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 PL ++++D+D FK+INDT+GH GD +L+ V+ +R D + R GG+EF+IV Sbjct: 292 PLCLIMLDLDHFKKINDTYGHPFGDLVLKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGT 351 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA-MFNGHPDYERLIQIADEALYI 444 + E + A+R+RS VE K+ + + + +++S G A ++ G + E L++ AD ALYI Sbjct: 352 TREEAVVLAQRLRSTVEMEKIAYED-KKVTITVSCGVAFLYKGDDNVEILLKRADSALYI 410 Query: 445 AKRRGRNRVE 454 AK+ GRNRV Sbjct: 411 AKQEGRNRVV 420 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 90/182 (49%), Gaps = 3/182 (1%) Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 L L E + D LT L NRR+ + E R G PL+ L++D D FK IN Sbjct: 167 LENVLNRERLKWLGLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPLACLMLDADHFKRIN 226 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 DTWGH GD +L+ +++ +R D R GG+EF ++L AERIR + Sbjct: 227 DTWGHQAGDVVLKVLARRVRQQLRGCDVAARIGGEEFAVLLPSTPVRHVQLVAERIRLAI 286 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHP---DYERLIQIADEALYIAKRRGRNRVELWKA 458 + + + +S+S+GAAM ERL+ AD ALY AKR GRNR L A Sbjct: 287 AGEPVHVSPDCVLQVSVSLGAAMLAPGAADISPERLMARADAALYQAKRNGRNRTMLAAA 346 Query: 459 SL 460 + Sbjct: 347 GV 348 >UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWQ3_DESAC Length = 648 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 2/188 (1%) Query: 267 KFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTP 326 L+ + TV I T++ L ++ D LT +NRR L + A R Sbjct: 461 GNLVGMVGTVLDITTMV--LLQQKLERLATTDELTGAVNRRQLFIYTDQFCQLAKRYKKA 518 Query: 327 LSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEAS 386 LSV+ D+D FK +NDT+GH GDE+LR+++ +R +D + RYGG+EF I++ E Sbjct: 519 LSVIFYDLDHFKAVNDTYGHAAGDEVLRQITTRIQSMLRDTDILARYGGEEFCILVPETD 578 Query: 387 ENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAK 446 + AERIR R+ ++ + ++GE + +++S+G A + LI AD+ +Y AK Sbjct: 579 GDHAYLFAERIRQRISESSVNLSSGESLQVTVSMGVATYQEDEQGSSLIDRADQGVYEAK 638 Query: 447 RRGRNRVE 454 RRGRN V Sbjct: 639 RRGRNCVV 646 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 103/172 (59%), Gaps = 4/172 (2%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ EE + D LT + NRR T E+ +NR GTPLS+++ D+D FK++ND Sbjct: 910 RKKVEEEIKLLATTDSLTGIANRRAFSTHLASELERSNRYGTPLSLVMFDIDYFKKVNDN 969 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+ GD++L+ +S+ N+R+ D V R+GG+EF++++ E+ + E++R + Sbjct: 970 FGHDAGDDVLQALSELVKRNIRAVDIVARWGGEEFMLLMPESDISAATAAIEKLRREISD 1029 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 G+ +L++S G +F + D + ++ D+ALY AK +GRNRVE+ Sbjct: 1030 FPF----GQVGSLTVSFGITVFVLNEDSKVFLKRVDDALYQAKEKGRNRVEI 1077 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 3/178 (1%) Query: 279 IITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 I +LR+ + +D LT L NRR++ ++ + A R PLS+++ D+D FK Sbjct: 275 YIDILRQRVDRGLE-LSVIDQLTGLHNRRYMNGQLEQFMQRAARGNQPLSLMMTDIDHFK 333 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 +NDT GH GD++LR++ + NVR +D V R GG+EF++++ + AERIR Sbjct: 334 AVNDTHGHQAGDDVLREIGKRLRANVRPTDVVCRTGGEEFVVLMPNTPGDLACAAAERIR 393 Query: 399 SRVEKTKLKAANG-EDIALSLSIGAAMFNG-HPDYERLIQIADEALYIAKRRGRNRVE 454 V + G +++ +++S G + G + L+ AD ALY AK GRNRVE Sbjct: 394 KAVAAEEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADTALYQAKTGGRNRVE 451 >UniRef50_C1SIQ7 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIQ7_9BACT Length = 312 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 5/203 (2%) Query: 256 TRNLNNRSL--RVKFLLQIRNTVSQIITLLRELFE--EVSRHEVGMDVLTKLLNRRFLPT 311 T+ N L R+ ++++ + +EL E + H D LT + NRR + Sbjct: 108 TKPFNEAELLMRINTHMELKRARDLLEEKNKELIEAYDKIEHLALTDTLTGIANRRNITN 167 Query: 312 IFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVF 371 + +E A R S+++ D+D FK +NDT+GH+ GD +L+ +S +R D V Sbjct: 168 MLGKEAARCKRNKGKFSLIMCDIDFFKRVNDTYGHDAGDYVLKTISHVIQQALREQDIVA 227 Query: 372 RYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY 431 R+GG+EF+IVL E + AE++R+ + T++ + G +++++ G + ++ Sbjct: 228 RWGGEEFLIVLPETDAGNAVAVAEKLRTAIGNTEM-SYEGISFSVTMTFGVSEYDVSLGI 286 Query: 432 ERLIQIADEALYIAKRRGRNRVE 454 E+ I+ AD+ALY K+ GRN+V Sbjct: 287 EKSIKKADDALYEGKQTGRNKVV 309 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 62/173 (35%), Positives = 101/173 (58%), Gaps = 2/173 (1%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ E+ R D LT L NRRF + + R G LS+L++D+D FK +ND Sbjct: 598 RKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMDIDYFKTVNDM 657 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+ GD++L+ +S+ +R+ D R GG+EF I+L + + AER+R+ +E Sbjct: 658 YGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLVAERLRAEIET 717 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVEL 455 TK+ +G + +++SIG A ++ H E+L++ AD LY AK GRN+V++ Sbjct: 718 TKMNTRSG-SLNITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRNQVKV 769 >UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1G5_PELTS Length = 343 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 20/248 (8%) Query: 212 LSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQ 271 +++ D+G+ FN + +AE + L + + R + + + + Sbjct: 102 IARGDYGITFNLRSNLEIEALAENFNKMSL-----KLKEERENLFRQVALLEEQKREISV 156 Query: 272 IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 + ++++ + L L D LT NRR++ + ++E+A A R G PLS+++ Sbjct: 157 QKEELARVNSRLELL--------SITDPLTGAYNRRYIISQLEQELAVAARHGLPLSLIM 208 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 ID+D FK++NDT GH GDE+L+ V + +R++D + RYGG+EF+++ E L Sbjct: 209 IDIDHFKKVNDTHGHQVGDEVLKDVVKVLSGCIRTADVLGRYGGEEFVVIAPFTGFQEAL 268 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD------YERLIQIADEALYIA 445 AER+R V + + G + L++S+G FNG + +RL+ ADE +Y A Sbjct: 269 VLAERLRDTVSRWPFETTYG-FLKLTISLGVTTFNGKEEHYHNSLIDRLLARADEEMYKA 327 Query: 446 KRRGRNRV 453 K +GRN V Sbjct: 328 KAQGRNLV 335 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 117/232 (50%), Gaps = 24/232 (10%) Query: 245 FDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQ-------------IITLLRELFEEV- 290 D ++ TR + SLR + + SQ + L R+ ++V Sbjct: 219 LDETLSRIRTTTRLGDLESLRGALVTEAEALRSQTQSLATSLSESQAQLDLTRKQLQQVQ 278 Query: 291 -----SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 ++ E D LT++ NRR L RE A R G PLS++IID+D FK+INDT+G Sbjct: 279 DDLKKAKEESLTDPLTQVANRRALFQSLTRETARTRRYGEPLSLIIIDLDHFKKINDTYG 338 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD +L++V+ +R SD + RYGG+EF+ +L E + + + AE+IR V + Sbjct: 339 HPVGDRVLKEVAGHARALLRDSDTLARYGGEEFVALLPETTLPQAMEKAEQIRLSVAAMR 398 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDY----ERLIQIADEALYIAKRRGRNRV 453 K GE +++S S+G A + E + AD+ALY AK GRN V Sbjct: 399 FKLK-GESLSISASLGVAQLDDGASQDANNEAFVHRADQALYRAKSGGRNCV 449 >UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4USH9_XANC8 Length = 578 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 99/188 (52%), Gaps = 3/188 (1%) Query: 270 LQIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 L+I ++ ++L E R + D LT L NRR+L E+A R PL Sbjct: 372 LEIAEAAAEQLSLALSNLRLRESLRRQSIRDALTGLYNRRYLEEALSHELARCARRDLPL 431 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 SVL++DVD FK+ ND GH GD +L V + +R+ D RYGG+EF ++L E Sbjct: 432 SVLMLDVDHFKQFNDGQGHAGGDLLLAAVGELLLTRLRAEDVACRYGGEEFTVILPETDG 491 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIADEALYIAK 446 E +R AE+IR + + ++ SIG A F + LIQ AD ALY+AK Sbjct: 492 EEAMRVAEQIRGHIAALAVSDGQRALPRVTASIGVASFPADGELGSALIQKADAALYVAK 551 Query: 447 RRGRNRVE 454 R+GRNRVE Sbjct: 552 RQGRNRVE 559 >UniRef50_C6C1P7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1P7_DESAD Length = 383 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 116/218 (53%), Gaps = 3/218 (1%) Query: 239 SRLIQDFDGIFNQTMRNTRNLNNRSLRVK---FLLQIRNTVSQIITLLRELFEEVSRHEV 295 LI++ + N L + + L++ + + EE ++ Sbjct: 161 EELIEELMEVKELQEDNAAQLATLLHELDEKNYALELEIAERKKAEQKLKESEERFKNLS 220 Query: 296 GMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRK 355 D LT L NRR + + ++EI + TG PLS++++DVD FK NDT+GH GD+IL Sbjct: 221 ITDQLTGLFNRRHMLDVAEKEIFKSRNTGHPLSIMLMDVDDFKMFNDTYGHAAGDDILEA 280 Query: 356 VSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA 415 + + +N+R++D FRYGG+EF+++L E + E ++ AE IR + + + G I Sbjct: 281 IGKIIKNNIRATDKAFRYGGEEFMVILPETNGLEAIKVAENIRIALAEYEYHPKEGSPIH 340 Query: 416 LSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 ++SIG A F E++I+ AD+ +Y K +G+NRV Sbjct: 341 KTISIGVAEFTNDESLEKVIKRADDNMYRCKIKGKNRV 378 >UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas RepID=Q2P4J7_XANOM Length = 569 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 102/194 (52%), Gaps = 3/194 (1%) Query: 270 LQIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 L+I ++ ++L E R + D LT L NRR+L E+A R G PL Sbjct: 372 LEIAEAAAEQLSLALSNLRLRESLRRQSIRDALTGLYNRRYLEESLSHELARCARRGLPL 431 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 SVL++DVD FK+ ND+ GH GD +L V + +R+ D RYGG+EF ++L EA Sbjct: 432 SVLMLDVDHFKQFNDSQGHAGGDLLLAAVGELLLTRLRTEDVACRYGGEEFTVLLPEADG 491 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIADEALYIAK 446 E LR AE+IR + + ++ SIG A F + LIQ AD ALY AK Sbjct: 492 EEALRVAEQIRGYIAALAVSDEARALPKVTASIGVASFPADGEQGASLIQKADAALYRAK 551 Query: 447 RRGRNRVELWKASL 460 RGRNRVE A + Sbjct: 552 HRGRNRVERHGAVM 565 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 69/179 (38%), Positives = 95/179 (53%), Gaps = 6/179 (3%) Query: 276 VSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335 Q++ LLR + D LT L NRR L +RE A RTG PL+VL+ D+D Sbjct: 202 AGQLLMLLR------LYRQATRDPLTGLFNRRALTEQIERERARFLRTGRPLTVLLFDLD 255 Query: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAE 395 +FK IND GH GD +L+ + N+R++D+ R+GG+EF+ L E + + AE Sbjct: 256 RFKRINDHHGHLVGDRVLQVFANVVQQNLRTTDHFGRWGGEEFLAALPETTSEQARVVAE 315 Query: 396 RIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 R+R E +L A G + + SIG A + + L DEALY AK GRNRV Sbjct: 316 RVRQACENERLTLAEGPSLGFTTSIGVATLHRDETLDSLFNRVDEALYNAKAYGRNRVV 374 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 95/170 (55%), Gaps = 4/170 (2%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E + D LT NR L + EI + R G LS+++ D+D FK INDT+GHN Sbjct: 179 EKIKKLATTDPLTGAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNI 238 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD++L+ +++R +D + R+GG+EF+I+ ++ AE+IR V+ K++ Sbjct: 239 GDQVLKITIDTIKNHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKVEG 298 Query: 409 ANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 +++S+G A + I+ AD ALY AK++G+NRVE++ + Sbjct: 299 IPE----ITISVGVAEYFPDESITDFIKKADIALYSAKKKGKNRVEIYSS 344 >UniRef50_B9L5N3 Ggdef domain protein n=1 Tax=Nautilia profundicola AmH RepID=B9L5N3_NAUPA Length = 549 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 118/216 (54%), Gaps = 5/216 (2%) Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKL 303 +F GI + + + + + ++ N VS II L E+ ++ D LT L Sbjct: 327 NFTGILKININSEAEKKHINKNLPYIKAYLNEVSAIIEAKYTL--ELLHNQSIKDPLTNL 384 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 NRR L I IA A R L+ L+ID+D FK +NDT+GH GD +L+ ++ +N Sbjct: 385 FNRRHLENILPMLIAAAQRRNEKLAFLMIDMDYFKTVNDTYGHKAGDTVLKTLANILINN 444 Query: 364 VRSSDYVFRYGGDEFIIVLTEA-SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 VR SD V RYGG+EF+I+L S + + AE+IR+ +E TK++ N I ++SIG Sbjct: 445 VRKSDIVIRYGGEEFLIILQNIKSYEDAINIAEKIRTSIENTKIQLDN-TVIQKTISIGI 503 Query: 423 AMFNGHPDY-ERLIQIADEALYIAKRRGRNRVELWK 457 ++F H I+ AD ALY AK GRN+V L+ Sbjct: 504 SLFPEHCKQGWECIKYADIALYKAKENGRNQVVLFH 539 >UniRef50_A1AK83 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK83_PELPD Length = 304 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 118/236 (50%), Gaps = 9/236 (3%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRV---KFLLQIRNTVSQIITLLR-- 284 G+ G I ++ + + L RS+ + K++ + N TLL Sbjct: 71 DGLTMAGEIRHSDRNVQILLLTAFEDVDYLK-RSINIGVDKYVTKPVNGFQLHETLLECA 129 Query: 285 --ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 L EE + D LT + NR F E A R GTPLS++I D+D FK +ND Sbjct: 130 HSLLAEEALQCAARTDHLTGIANRWEFINRFNTEKGRAERHGTPLSIIIADIDHFKSVND 189 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 T+GHN GD +LR V+ A ++R D R+GG+EF+++L + + + R AE++R V Sbjct: 190 TFGHNAGDRVLRSVANAISSSIRVEDACGRWGGEEFMLLLPDTNLDAAARVAEKLRQAVS 249 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 + + GE IA++LS+G F + IQ D ALY AK GRNRVEL Sbjct: 250 ELSIP-WEGESIAVTLSMGVGQFRPGMTLDECIQPVDHALYRAKTGGRNRVELAAP 304 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 6/200 (3%) Query: 257 RNLNNRSLRVKFLLQIRNTVSQIITLLRELFE--EVSRHEVGMDVLTKLLNRRFLPTIFK 314 N+ R L + R +++ REL E H +D LT NRR L Sbjct: 331 ENIRERELLADYRELSRTLEAKVTQRTRELEAKNEELDHLASVDKLTDTFNRRALDKALL 390 Query: 315 REIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYG 374 E+ A+R PLS+L++D+D FK++ND +GH TGD++L +SQ +N+R+SD + R+G Sbjct: 391 AELERADRYQRPLSILLMDIDLFKQVNDEYGHLTGDKVLVTLSQTIRENLRASDILGRWG 450 Query: 375 GDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERL 434 G+EF+++ E + AE++R +E T + +++SIG ++ E L Sbjct: 451 GEEFLVICPETDLEQARNVAEKVRQAIEGTDFELGK----TITISIGLSVLIEGTSAESL 506 Query: 435 IQIADEALYIAKRRGRNRVE 454 + AD+ALY AK +GRNRV Sbjct: 507 VAEADKALYQAKSQGRNRVC 526 >UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZT6_DESAD Length = 442 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 6/179 (3%) Query: 279 IITLLRELFE--EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 I TL R++ E R D+LT L NRR + I E R TP++ ++ID+D Sbjct: 267 IFTLKRQVASRTEELRQMSQTDMLTGLYNRRKMDEIMHHEFDRFKRYNTPITFILIDIDN 326 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK INDT+GH GD +L + ++ N R +D + R+GG+EFI+V E + E + AE+ Sbjct: 327 FKTINDTYGHAVGDNVLVRFAEILISNTRKTDRIGRWGGEEFIVVCPETTSGEGMIIAEK 386 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 +R R+ +T+ N + S G N D+ L D ALY +K +GRN+V + Sbjct: 387 LRQRIAETRFPTINN----CTASFGITEINQQDDFMSLFARCDTALYSSKEQGRNKVTM 441 >UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUP2_DESOH Length = 1644 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 111/198 (56%), Gaps = 2/198 (1%) Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 +L + R +II+L E+SR D LT L N + + ++E+ A Sbjct: 1448 ENNLTRNAFTRDRIETLEIISLSAAGRLELSRK-AVTDGLTGLYNHDYFQNMLQQELLLA 1506 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 R G LS+++ID+D FK NDTWGH GD +LR+V+ ++ RSSD V RYGG+E + Sbjct: 1507 KRKGRELSMIMIDIDHFKRFNDTWGHQAGDMVLREVAAEIRESCRSSDVVARYGGEEMAL 1566 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYER-LIQIAD 439 +L E AE+IR RVE +++ A GE + +++S+G A F H ++ L++ AD Sbjct: 1567 LLHETGPEAAFALAEKIRRRVEALRVEHAPGEYLQVTISLGVAGFPIHAKNKKPLVKKAD 1626 Query: 440 EALYIAKRRGRNRVELWK 457 +ALY +K GRN V L Sbjct: 1627 DALYSSKAGGRNMVTLAT 1644 >UniRef50_A1HRZ7 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRZ7_9FIRM Length = 794 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 107/201 (53%), Gaps = 9/201 (4%) Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 +R R+ F + ++ + L + + D LT L NRR K E+ + Sbjct: 590 DRLERLPFAALMAQQIA--LGLEKANLYNQVKAMALSDGLTGLANRRNFDMFLKAELRRS 647 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 PLS+++ D+DKFK NDT+GH TGD++L ++ + NVRS D RYGG+EF I Sbjct: 648 FTLKRPLSLIMFDLDKFKTYNDTYGHLTGDKLLAQIGEILRHNVRSIDLPARYGGEEFSI 707 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGE-DIALSLSIGAAMFNGH------PDYER 433 +L E + E L AE++R VE+T G ++ S+G A ++ PD E Sbjct: 708 ILPECTNAEALAIAEKLRQIVEETHFPDNLGAFTARITASLGVATYDPAITSGGVPDMED 767 Query: 434 LIQIADEALYIAKRRGRNRVE 454 LI AD+ALY AK++GRNRV Sbjct: 768 LIAWADKALYQAKQQGRNRVV 788 >UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5H6_9NEIS Length = 650 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 4/203 (1%) Query: 259 LNNRSLRVKFLLQIRNTVSQIITLLREL--FEEVSRHEVGMDVLTKLLNRRFLPTIFKRE 316 +N+ S R + ++ + L E+ + + ++ D LT + NRR+L R Sbjct: 436 INDISERKRLEHSLKTANEALRQHLNEIESLQSGLKEQLVRDPLTGVFNRRYLDDALPRV 495 Query: 317 IAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 +AH G P+++L++D D FK INDT+GH GD +L + D++RS+D V RYGG+ Sbjct: 496 LAHTLALGKPVALLMLDADHFKRINDTYGHKAGDCVLSTLGARLRDSLRSNDMVCRYGGE 555 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLI 435 EF+IVL S + AE++R V++ ++A + + +++SIG A H D E L+ Sbjct: 556 EFLIVLPGMSLEHAIAKAEQLRKVVQQWPIEALD-HTLNVTVSIGVACSPLHAEDAESLV 614 Query: 436 QIADEALYIAKRRGRNRVELWKA 458 AD ALY+AK GR+R+ + + Sbjct: 615 HAADTALYVAKSSGRDRLCVAEP 637 >UniRef50_Q2JCX5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Frankia RepID=Q2JCX5_FRASC Length = 562 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 99/190 (52%), Gaps = 1/190 (0%) Query: 270 LQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSV 329 L + ++ L R L H D T+L N + + +REI A + G PLSV Sbjct: 368 LLMLAITPPVLLLQRSLLHAELLHAARSDAKTRLANPAYWRQVAEREINRACQVGRPLSV 427 Query: 330 LIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENE 389 L++D+D FK +ND +GH GD IL V+ A R D V R+GG+EF+++LTE Sbjct: 428 LLVDIDHFKRVNDRFGHLIGDVILIAVADALRAATRPRDLVGRFGGEEFVVLLTEVELEN 487 Query: 390 TLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG-HPDYERLIQIADEALYIAKRR 448 AERIR +V T + +++++S+G A +G D LI AD ALY AK Sbjct: 488 AADVAERIRRQVAGTHCRLEGRPPLSVTVSVGVATHHGPRGDLAGLIARADSALYRAKAD 547 Query: 449 GRNRVELWKA 458 GRNRV L Sbjct: 548 GRNRVRLAGP 557 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 5/198 (2%) Query: 257 RNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKRE 316 R ++ ++ + L +N +S+ +L E+ + D LT L NRR L F E Sbjct: 124 RVKHSVAVDIGALKNAQNELSEAYAMLALKSVELEK-ASITDALTGLFNRRRLDESFAHE 182 Query: 317 IAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 + A R P+S++I DVD FK +ND GH+ GDE+L+ ++ VR+ D V R+GG+ Sbjct: 183 LDRAQRYAEPVSLIISDVDHFKSVNDIHGHHVGDEVLQAMAGLLRHGVRALDVVGRWGGE 242 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQ 436 EF+I+ + AE++R+ + + S S G A + ++ + Sbjct: 243 EFLIICPNTDLDGATALAEKLRAAIASAQFPGIG----TSSASFGVAQYQDGESFKDTVA 298 Query: 437 IADEALYIAKRRGRNRVE 454 AD ALY AK GRNR+E Sbjct: 299 RADTALYRAKVNGRNRIE 316 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 77/238 (32%), Positives = 116/238 (48%), Gaps = 6/238 (2%) Query: 226 RHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRE 285 R F + + +L G+ N + + +NL + +L ++ ++ E Sbjct: 444 RLRFKSKSLICMPLKLKDKIIGVLN--LSDKKNLAPFTDADLQVLTSFANLASLMIERTE 501 Query: 286 LFEEVSR--HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 + EE R D LT L NRRFL + E+ + R G L+V+ ID+D FK ND Sbjct: 502 VLEESERFEQLSVTDALTGLYNRRFLKNRLEEELNRSIRQGLNLTVIFIDLDFFKNYNDL 561 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 GH GD+ LR ++ ++R D V RYGG+EF VL S+ E + AERIRS +E+ Sbjct: 562 CGHLAGDDALRITAEIIKASLRDMDIVARYGGEEFCAVLPGTSKVEAMIVAERIRSEIER 621 Query: 404 TKLKAANG-EDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKAS 459 K + + L+ S+G A F + L+ +D ALY AK GRNR+ + S Sbjct: 622 EKFPGESEIPQVRLTASLGVASFPEDGRTFTALVHASDVALYEAKAGGRNRIVAARTS 679 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 93/173 (53%), Gaps = 2/173 (1%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ E R DVLT + NRR + + E+ A R G PL L++D+D FK INDT Sbjct: 406 RKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDIDHFKRINDT 465 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 GH GD ++ ++ +R D + R GG+EF IVLTE + L AER+R V Sbjct: 466 HGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVAERLRQAVAA 525 Query: 404 TKLKAANGEDIALSLSIGAAM-FNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++ A G +A + SIG A G + ++ AD ALY AKR GRN+V + Sbjct: 526 IRIPAELG-TVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNKVAV 577 >UniRef50_A5IF46 Sensor histidine kinase n=5 Tax=Bacteria RepID=A5IF46_LEGPC Length = 565 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 5/212 (2%) Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRF 308 F + N N + ++ + + +LR E R++ DVL+ L NRR+ Sbjct: 358 FKKEAEEQINKENNQEILASMMAEQIALGISNIMLR----ETLRNQSLRDVLSGLYNRRY 413 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 L + RE+ R L+VL++D+D FK+ ND +GH GD +++ + R D Sbjct: 414 LNEVLDRELNRCARKSLSLAVLMLDIDHFKQFNDKFGHEAGDMVIQAFANVLRQVTRKED 473 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH 428 RYGG+EFI+++ E L+ A+ I V + L+ +++SIG M+ H Sbjct: 474 IACRYGGEEFILIIPEIDLEAALQRAQSIHDAVSRIHLRYGGNALTQITISIGLTMYPAH 533 Query: 429 P-DYERLIQIADEALYIAKRRGRNRVELWKAS 459 D + LI AD ALY AK GRN+ L+ + Sbjct: 534 GNDMQDLITAADNALYEAKNSGRNKTVLYHKN 565 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 1/177 (0%) Query: 279 IITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 I+ L E R D LT + NRR T+ + I+H++R +PLS+++ID+D FK Sbjct: 205 IVMLANEQVTLELRAIAERDPLTGVFNRRSFLTLLDKSISHSDRMASPLSIMLIDLDHFK 264 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 +INDTWGH +GDE LR +R+ D + R GG+EF I+L + ++ AER+R Sbjct: 265 KINDTWGHKSGDEALRHFVAVAVPCIRNGDIIGRVGGEEFAILLPDTDISKAATVAERLR 324 Query: 399 SRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 V +K +G I L++SIG + E + AD A+Y AK +GRN+VE+ Sbjct: 325 CEVAARPVKNEHG-SITLTVSIGVTHYRKDEAPEVTLHRADNAMYTAKDKGRNQVEV 380 >UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales RepID=A3WKT4_9GAMM Length = 364 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 65/170 (38%), Positives = 92/170 (54%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L + R D LTKL NRR + + KR + + + +SVL++D+D FK +NDT G Sbjct: 177 LTHDQLRFYATTDPLTKLRNRRHMSELLKRALQNKHAEQRNVSVLLLDLDHFKSVNDTHG 236 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD++LR + D VR D V R+GG+EF++ L + N + AERIR + K Sbjct: 237 HEVGDKVLRITADILRDTVRDHDKVSRWGGEEFLVFLPRTNLNHAAQVAERIRKAIAKYP 296 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 E+I L+ SIG + L++ AD+ALY K GRN VEL Sbjct: 297 WHTVINENIQLTTSIGVSELKPDDSVNTLVKRADDALYRGKEAGRNWVEL 346 >UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WV4_DESDG Length = 398 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 25/196 (12%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R + EE+S H D LT L NRRF + E+ +G PLS+L++D+D FK +NDT Sbjct: 195 RRMLEELS-HMARTDPLTGLNNRRFFMEAARAEVERMQSSGRPLSLLMLDIDHFKRVNDT 253 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 WGH+ GD +L+++S + +R D R GG+EF ++L E E R AE +R V Sbjct: 254 WGHDAGDMVLKQLSCCLAETMRGQDVCARLGGEEFAVLLPETGHAEACRAAETLRQAVAG 313 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHPD---------------------YERLIQIADEAL 442 G +++ S+G + E L++ AD AL Sbjct: 314 MAFA---GHGFSVTSSLGLTTLDSAGHAVSGQRPVPGGVAVSACCGQVVEILLKRADIAL 370 Query: 443 YIAKRRGRNRVELWKA 458 Y AK+ GRNR E++ A Sbjct: 371 YAAKKNGRNRTEVYPA 386 >UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SY9_SULDN Length = 611 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 4/165 (2%) Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 +D LT NRR + K+EI R LS+++ D+D FK +NDT+GH GD Sbjct: 450 LERLASIDKLTGAYNRRMIDEFMKKEIFLHVRDSKNLSLIMADIDHFKLVNDTYGHQAGD 509 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 +L V + +R SD RYGG+EFI++ S + L A++IR +E Sbjct: 510 AVLSDVGRIISSTIRKSDIFGRYGGEEFIVICPNTSSQQALILAQKIREEIENFHFAEVG 569 Query: 411 GEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + ++S+G A + + E +I+ AD+ALYIAK+ GRNRV L Sbjct: 570 HK----TISLGVATLIANDEVENIIKRADDALYIAKKEGRNRVVL 610 >UniRef50_C6XL77 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alphaproteobacteria RepID=C6XL77_HIRBI Length = 459 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 5/201 (2%) Query: 257 RNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKRE 316 R ++ L + Q+ + I LR ++ D LT L NRR++ ++ Sbjct: 257 RPIDPEELLARVKTQVSKK--RYIDSLRARLDQSME-LAVTDQLTGLHNRRYMENQLEQF 313 Query: 317 IAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 + AN G P+S+L+ D+D FK++ND GH+ GDE+LR+ S N+R SD RYGG+ Sbjct: 314 MKRANMGGGPVSILLCDLDHFKKVNDGHGHDVGDEVLRQFSDRLMHNIRPSDIACRYGGE 373 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE-DIALSLSIGAA-MFNGHPDYERL 434 EF++++ + + TAERIR +V+ NG + +++S GA+ F +L Sbjct: 374 EFMVIMPDTTIQMAQLTAERIREKVDGAPFSINNGLGRLDVTMSGGASVTFPPDDSVAQL 433 Query: 435 IQIADEALYIAKRRGRNRVEL 455 I+ ADEALY AK GRNR+ Sbjct: 434 IKRADEALYNAKENGRNRIVC 454 >UniRef50_B6BJ77 Signal transduction response regulator-chey like receiver and ggdef domain n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJ77_9PROT Length = 534 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 123/234 (52%), Gaps = 7/234 (2%) Query: 228 YFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRV--KFLLQIRNTVSQIITLLRE 285 I V +++ D I N ++ + L SL + K N V+ + L E Sbjct: 306 EIGKILFVKNLNFYTDKLDMIKNISIVSGIVLLLLSLYMMRKIFNNYINIVNSYQSKL-E 364 Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 + V +D LTK+ NR+ + TI +E+ A R LS++I D+D FK INDT+G Sbjct: 365 IKNRTLLKLVNVDHLTKIHNRKSIETILIKELKRAKRYNHELSLIIFDIDNFKNINDTYG 424 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 HN GD++L+ +++ +++R SDY R+GG+EFI++ TE S + L AE+IR + Sbjct: 425 HNIGDKVLKSIAKVVANSIRESDYFGRWGGEEFIVISTETSMDNALLVAEKIRESISTYD 484 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + A ++ SIG A + ++ ++ AD ALY AK G+NRV + S Sbjct: 485 FEEAE----KITCSIGVAEYTSEDTHQSIVHNADTALYKAKHSGKNRVIFHEHS 534 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 102/176 (57%), Gaps = 2/176 (1%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ E+ E D LT + NRR +RE+ A R G PL+VL++D+D+FK +ND Sbjct: 804 RKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDR 863 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+ GD +L QA +R +D + R GG+EF VL E ++ L AER+R VE+ Sbjct: 864 FGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEE 923 Query: 404 TKLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 + +G+ + ++SIG A+ G + +++ AD ALY AK GRNRV L +A Sbjct: 924 MDVP-FSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEAGRNRVMLARA 978 >UniRef50_C0QPI4 Response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QPI4_PERMH Length = 615 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 122/215 (56%), Gaps = 4/215 (1%) Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 GI Q + + + N ++ F+ V+ +I + + E R + +D LT L NR Sbjct: 398 GIILQLIYDKESRVNIKNKLPFIEAYLREVAPVIE--AKSYMEKLRKQSLVDQLTGLYNR 455 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 RFL + + R + + +L++DVD FK++ND +GH+ GD +L++V+ +VR Sbjct: 456 RFLEELIPKLSQQTIRRKSTIGILMVDVDFFKQVNDQYGHDVGDTVLKRVADILNKSVRE 515 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 +D V RYGG+EFI++L + + +++ AE+IR +VE + +G + ++SIG + F Sbjct: 516 ADIVVRYGGEEFIVLLVDVEKGKSVEIAEKIRKKVENMVIHT-DGVTLKKTVSIGVSEFP 574 Query: 427 GHPD-YERLIQIADEALYIAKRRGRNRVELWKASL 460 D + + I+ AD ALY AK GRN+V ++ S+ Sbjct: 575 HDSDRFWQCIKFADIALYRAKETGRNKVVRFEKSM 609 >UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NJD1_9DELT Length = 469 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 1/188 (0%) Query: 266 VKFLLQIRNTVSQIITLLR-ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 + + I + S+++ + E+ + +D LT L N+R+ + E+ A R Sbjct: 278 LGIVEHITDITSRVLAEQALQKSEQRYKELSIVDELTGLFNKRYFNKHLRLEVERARRYQ 337 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 PLS+LI+D+D FK NDT+GH GD +L + D++R +D R+GG+EF+++L Sbjct: 338 HPLSLLIMDIDNFKHYNDTYGHPAGDRVLSALGGMLRDSMRLNDLACRFGGEEFVVILPM 397 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYI 444 L+ AER+R R + + G I ++S+G A F E L+ AD+ LY Sbjct: 398 TDGETGLKLAERLRERFAALEFQPLEGVVIRKTMSVGVAQFEDEESPESLLARADKNLYA 457 Query: 445 AKRRGRNR 452 AK GR+R Sbjct: 458 AKAAGRDR 465 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 11/259 (4%) Query: 201 LLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLN 260 +G + L F +W +F+ + + + + Sbjct: 67 WFTRKVGRVVALGTPAFTIWKQRPYLVHFNNYQPITGQGEFMYQNTTLL------PLRSS 120 Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 N + L+ T I +L + + +H D LT+L NR + E + Sbjct: 121 NSEIHHVCLVIYDLTDVAINSLALQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYS-- 178 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 R G+ +++L++D+D FK IND GH GD ++++VS+ + +VR SD RYGG+EF I Sbjct: 179 -RHGSSIALLMLDIDHFKSINDRHGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAI 237 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN-GHPDYERLIQIAD 439 +L AER+R VE+ ++ NG+ IA ++S+G A + D+ LI+ AD Sbjct: 238 LLPHTDLAGARTLAERLRQSVEEQEV-IHNGQAIAFTISLGIACLDRPARDHRCLIEWAD 296 Query: 440 EALYIAKRRGRNRVELWKA 458 +ALY +KR GRNRV + Sbjct: 297 QALYASKRAGRNRVSTYAP 315 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 2/196 (1%) Query: 259 LNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIA 318 + +L F+ ++R ++ L E E++S D LT L RR L E + Sbjct: 169 MAQMALIGGFISKLRASLRVKNHQLNEALEKIS-VMASTDELTGLCTRRELMKQLSNEFS 227 Query: 319 HANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEF 378 R+ LS+ ++D+D FK IND++GH GD +L+KV+Q VRS D + RYGG+EF Sbjct: 228 RCRRSSGALSLCLLDIDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCLGRYGGEEF 287 Query: 379 IIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIA 438 +++L + + TAER+R V + +++S+GAA E LI Sbjct: 288 LLILPQTPLDGAFITAERLRRAVMDIPFPEV-APEFRVTISLGAAELEEGEAMETLISRV 346 Query: 439 DEALYIAKRRGRNRVE 454 D+ALY AK GRNRV Sbjct: 347 DKALYAAKGAGRNRVV 362 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 4/221 (1%) Query: 237 HISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSR---H 293 ++SR I D + + N +++ L+ E+ + Sbjct: 205 YLSRSITDPLQTLAKGVEKLGQGELHHRITLETQDEFNHLAETFNLMANQLEQSQQDLYR 264 Query: 294 EVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEIL 353 +D LT++ NRR EI + R P+S++++D+D FK +NDT+GH GD L Sbjct: 265 LATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFKRLNDTYGHQAGDLAL 324 Query: 354 RKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGED 413 +V+Q VR D V RYGG+EF ++L +A+ ++ AERIR + + + + + Sbjct: 325 CEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIRLAIAEKSVVLPSQQH 384 Query: 414 IALSLSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRV 453 I ++ S+G A + H D ERL++ AD+ALY AK +GRNRV Sbjct: 385 IDMTASLGVATYPDHADCKERLVKQADQALYTAKYQGRNRV 425 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 2/166 (1%) Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 + D +TKL NRR+ I + + + R LS+L+ID+D+FK +NDT+GH GD Sbjct: 394 LKLLASTDSMTKLYNRRYFTEISAKVLHLSKREKNNLSILMIDIDRFKVVNDTYGHQFGD 453 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 E+L +S+ ++ R SD V RYGG+EF+I+L S + A++IR VE ++A Sbjct: 454 EVLIALSRLLVEHQRKSDIVCRYGGEEFVILLPNTSLKDATNIAQKIRILVESLTMEAPT 513 Query: 411 GEDIALSLSIGAAMFN--GHPDYERLIQIADEALYIAKRRGRNRVE 454 ++ ++SIG A + D + ++ AD+ALY AK GRNRV Sbjct: 514 NKEFKFTISIGVAQIDVEHEDDIKFALKRADDALYRAKNSGRNRVC 559 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 5/231 (2%) Query: 225 GRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLR 284 G F+G + + IQ+ + + R + + S ++ T+ I R Sbjct: 823 GMRQFAGSGDGDAVGA-IQETEALRKDGTRVSVERSVSSFQLGGRWYAVATIRDITE--R 879 Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + E D LT L NRR + +RE R L++L++D+D FK +NDT Sbjct: 880 KATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMDIDHFKRVNDTH 939 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH GDE+LR++++ +R D + R GG+EF ++L E + A+R+R +EK Sbjct: 940 GHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEVAQRLRRAIEKA 999 Query: 405 KLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVE 454 + G + +++SIGAA N E L++ AD ALY AK+ GRN+V Sbjct: 1000 SMATDAG-TLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNKVV 1049 >UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YHX9_9CYAN Length = 676 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 8/235 (3%) Query: 227 HYFSGIAEVGHISRLI---QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 + + H+ + + GI + LN ++ + S + L Sbjct: 446 QHIENSPSISHLCIPMIAQGEALGILYLSFLEVDKLNENQQQLGIMF----ARSIGLALA 501 Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 E R++ D LT L NRR++ REI R P+ +L+ID+D FK+ NDT Sbjct: 502 NLQLRESLRYQSIRDPLTTLFNRRYMEESLTREINRVTRNTYPIGILMIDIDHFKQFNDT 561 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+TGD +L+ + VR SD RYGG+E I++L E + ET AE+IR V+K Sbjct: 562 YGHDTGDSVLKAIGHFLQSQVRGSDIACRYGGEELILILPEVNLKETQNRAEQIREGVKK 621 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWK 457 +LK + + +++SIG A F E +IQ AD ALY AK +GR++V + Sbjct: 622 LQLKRGSQKLNEITVSIGVACFPDQGLTGEIVIQAADAALYKAKEQGRDQVVVAD 676 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 6/179 (3%) Query: 278 QIITLLRELFEEVSRHE--VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335 ++ R++ E ++ E D LT L NR + EI R PLS++++D+D Sbjct: 1091 KLSAFNRQMAEANAKLEQLSVTDRLTGLYNRMKIDDTLLEEIGRVLRYNYPLSLILMDID 1150 Query: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAE 395 FK++NDT GH GD +L ++++ N+RS+D R+GG+EF+++ L AE Sbjct: 1151 LFKQVNDTHGHQAGDAVLIQMAKTMDKNIRSTDICGRWGGEEFMVICPHTDLKGALSLAE 1210 Query: 396 RIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +R + + I + S G A + LI AD A+Y+AK GRNRVE Sbjct: 1211 HLRESIARQIFPHV----ITQTGSFGVAQYGNGDSEADLIARADRAMYLAKEGGRNRVE 1265 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 5/193 (2%) Query: 271 QIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 + + QI+ L++ ++++R +D LT++ NRR + E A R+ L+++ Sbjct: 313 AVLQSRIQILMQLKQSQDQLAR-SARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALI 371 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENE 389 ++D+D FK ND +GH GD LR V+Q ++ R+ D V RYGG+EF+++L E + Sbjct: 372 MLDIDHFKPFNDGYGHLAGDGCLRTVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDG 431 Query: 390 TLRTAERIRSRVEKTKLKAA-NGEDIALSLSIGAAMFNG--HPDYERLIQIADEALYIAK 446 AERIR + K K+ + D +++S G A + LI +AD+ LY AK Sbjct: 432 AQMIAERIRKAIAKLKINHEFSSTDNTITISAGVACLSPSQEGSPHELILLADQGLYQAK 491 Query: 447 RRGRNRVELWKAS 459 +GRN+V + + S Sbjct: 492 AQGRNQVAIVQTS 504 >UniRef50_C1XM61 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XM61_MEIRU Length = 609 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 113/199 (56%), Gaps = 2/199 (1%) Query: 256 TRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKR 315 R +L ++ L + S+++ LR+ E+ R D LT+L NRR+L +R Sbjct: 410 ARANRELALAIERLKEANAEKSRLLDKLRQQSAELER-LARQDPLTRLNNRRYLEENLER 468 Query: 316 EIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGG 375 E A A R P+SV ++D+D FK+INDT+ H GD++LR V Q + R D+ RYGG Sbjct: 469 EFAAAKRYKFPISVALVDIDHFKQINDTFSHQVGDDVLRIVGQILEASCRGVDFAARYGG 528 Query: 376 DEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLI 435 +EF +V + L ERIR R+E+ A + D+ +++SIG + P++E+L+ Sbjct: 529 EEFALVFPQTDLPGALIACERIRQRIEQHNWAALH-PDLKVTVSIGVSSDPSLPNHEKLL 587 Query: 436 QIADEALYIAKRRGRNRVE 454 ADE LY AKR GRNRV Sbjct: 588 AAADEQLYAAKRAGRNRVC 606 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 31/278 (11%) Query: 208 SSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRL---------IQDFDGIFNQTMRNTRN 258 + ++ + + F ++ + +G + I + F FN+ + + Sbjct: 181 DPIMITDCNATIVFANEAFQHITGYSASEIIGENPRVLSSGKHDEMFYAQFNEALASGTP 240 Query: 259 LNN-------------RSLRVKFLLQIRNTVSQIITLLRELFEEVSRHE-----VGMDVL 300 + L + T++ +++ +++ + R + D L Sbjct: 241 FRTTFINKRKDGSLFYAEHSISPLCNLEGTITHYVSISQDVTTRLGREQKLLEIAHSDPL 300 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 T L NRR +R I A +G P S++I D+D FK +ND +GH GD +L V+ Sbjct: 301 TGLNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGHPAGDRVLTSVAVIL 360 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 +R D R+GG+EF+I++ ++S + A+RIR VE + ++++S+ Sbjct: 361 KQRIRLQDVAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLLIPNTG----SVTISL 416 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 G A + LIQ AD+ALY AKRRGRNRV++ +A Sbjct: 417 GVAQLSPGETAASLIQRADKALYQAKRRGRNRVDIAQA 454 >UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY33_9AQUI Length = 345 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 6/213 (2%) Query: 243 QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTK 302 +D + N+ M R L +S+ KF+ ++ +I L EL + E +D LT Sbjct: 137 EDVQKVLNRIMHEVRGL--KSVNRKFIQRLEEQRGEIERLREEL--RRVKEEANIDPLTG 192 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 L NRR + G P SV++ID+D FK+INDT+GH GD++L+++ + Sbjct: 193 LRNRRSFERALSEFFRDFKKFGYPFSVIMIDLDNFKQINDTYGHLAGDKVLKEIGNILRN 252 Query: 363 NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 +R+ D R GG+EF I+L + E L AER+R + ++ + + I + S G Sbjct: 253 YLRAKDVPARTGGEEFTIILPGITREEALMVAERLRKVIANYTVEHED-KKINPTASFGV 311 Query: 423 AMFNGH-PDYERLIQIADEALYIAKRRGRNRVE 454 A N E L+++ADE LY AKRRG+N V Sbjct: 312 AEVNEQVETPEDLLRLADENLYKAKRRGKNTVV 344 >UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clostridium thermocellum RepID=A3DHG2_CLOTH Length = 415 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 5/212 (2%) Query: 251 QTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLP 310 Q ++N + +L + + +I+ R L + R D LTKL NRRFL Sbjct: 205 QLYSKSKNYFDEAL-ISKVKSYIEVAKPVISSKRTLHQ--LRKNATTDKLTKLYNRRFLE 261 Query: 311 TIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYV 370 ++ + LSV+++D+D FK INDT+GHN GD +L ++ +R +D V Sbjct: 262 QYLDNQLEITGFSNQKLSVIMMDIDNFKRINDTYGHNAGDAVLVTFARVILRCLRQTDLV 321 Query: 371 FRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA-LSLSIGAAMFNGHP 429 RYGG+EFI +L + AERIR + + N + +S S G + + H Sbjct: 322 ARYGGEEFIAILPSSDTKNAYDIAERIRESIAAEPMPKINDVQLPNISCSFGVSTYPTHA 381 Query: 430 -DYERLIQIADEALYIAKRRGRNRVELWKASL 460 + LI+ AD ALY AK+ G+NRV + + Sbjct: 382 KNKNDLIKAADIALYKAKQAGKNRVITYSEGM 413 >UniRef50_B4U722 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U722_HYDS0 Length = 640 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 1/180 (0%) Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 + +L E + + D LT NRR++ + +A R G VL+IDVD FKEIN Sbjct: 455 MESKLLMEKLKEQSIKDQLTGFYNRRYIEEAIDPILNNAKRKGETTGVLMIDVDHFKEIN 514 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 D +GH+ GD +L+ V+Q +++R SD R+GG+EF+++LT ++ AE+IR + Sbjct: 515 DKYGHDVGDMVLKTVAQTIKESIRESDIPIRFGGEEFMVLLTNVKPGDSESVAEKIRKNM 574 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVELWKASL 460 E +K N I ++SIG + D + + ++ AD ALY AK GRN+V ++ + Sbjct: 575 ENRVIKLPNNTTIKRTISIGVSEIPTDTDKFWQAVKFADVALYKAKESGRNKVVRYQKDM 634 >UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomonas fluorescens RepID=Q4KKJ4_PSEF5 Length = 727 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 5/219 (2%) Query: 236 GHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEV 295 H+ L+ D Q R + + R++ L + +++ Q RE EE R + Sbjct: 512 SHLEGLLGTMDHHQKQRDEREREV---AARLQSLAERVSSMEQEAQGYREHLEEQ-RQKA 567 Query: 296 GMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRK 355 +D LT L NR + E+ + G L + ++D+D FK IND +GH GD++L+ Sbjct: 568 LIDPLTGLPNRAAWSERLEHEVGQWQQHGNSLLLAMLDLDHFKRINDNYGHLAGDKVLKI 627 Query: 356 VSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA 415 ++ +R SD++ R+GG+EF+++L +R E +R+ +E GE + Sbjct: 628 IANVLRKRLRGSDFIARFGGEEFVLLLPNTPWPVGVRIVEALRAAIEACPF-HFKGEPVT 686 Query: 416 LSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +++S+G + F + +I+ AD+ALY AK GRNRVE Sbjct: 687 ITVSVGLSAFKAGDRSDLVIKRADQALYRAKDAGRNRVE 725 >UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WGU1_CHLAA Length = 324 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 4/226 (1%) Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVS 291 I+ + + ++ F+ + RV+ L + + REL ++ Sbjct: 98 ISALDDVEDKVRAFECGGVDYIAKPFQPLEVLARVRTHLALAQARKALEAANRELQRALA 157 Query: 292 RH--EVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 R MD LT + NR + + E A A R PL++ ++DVD FK+IND +GH G Sbjct: 158 REAELARMDWLTGVYNRSHFYELARHEFAIATRYERPLTMCMLDVDHFKQINDRYGHLVG 217 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D++LR V+Q +R++D + R+GG+EFI++L + L AER+R + ++ Sbjct: 218 DQVLRAVAQTVAHQIRTADSIGRFGGEEFILLLPNTNLPSALTLAERLRVTIADLQVHTD 277 Query: 410 NGEDIALSLSIGAAMFNG-HPDYERLIQIADEALYIAKRRGRNRVE 454 G + ++S+G A ERLI AD ALY AKR+GRN V Sbjct: 278 RG-IVTATISVGVAERQSTDTTIERLIDRADRALYAAKRQGRNCVV 322 >UniRef50_A3DDM3 Diguanylate cyclase n=3 Tax=Clostridium thermocellum RepID=A3DDM3_CLOTH Length = 1826 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 108/190 (56%), Gaps = 6/190 (3%) Query: 272 IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 + +S+I L E ++ + D LT R+F + ++ A+R + +S+++ Sbjct: 1464 MVKLLSKIAALQIENYD--LKIISTTDKLTGTYTRKFFENAIETQLKKASREKSQMSIIM 1521 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 ID+DKFK IND +GH GDEIL KV N+R +D RYGG+EF+I+L + +E Sbjct: 1522 IDIDKFKSINDNYGHQKGDEILSKVGNILLKNIRPTDICCRYGGEEFVIILPDTGPSEAE 1581 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGR 450 AER+RS VEK +L G+ +L++S+G + + H LI+ AD+ALY AK GR Sbjct: 1582 ALAERLRSTVEKARLM---GQGNSLTISLGISCYPKHGSIRNELIEKADQALYHAKESGR 1638 Query: 451 NRVELWKASL 460 NR LW + Sbjct: 1639 NRYSLWNTKM 1648 >UniRef50_C0QHN1 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHN1_DESAH Length = 354 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 84/288 (29%), Positives = 142/288 (49%), Gaps = 14/288 (4%) Query: 168 NYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRH 227 NYR+F+ + R I W +YK L+S + + ++ + NH Sbjct: 61 NYRLFAFVI-------RTDRGIDVWLDPRMYKKSLESVIINDFDITDNSNINYLNH---- 109 Query: 228 YFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTV--SQIITLLRE 285 F + S + + R + + + +I N + S I + R+ Sbjct: 110 TFHPDDKESECSLKNLTSYDLIEENCRAKIYMLPNQTLLNYHDEIVNIILKSTGIAISRQ 169 Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 + +D LT NRR +R ++ A R PLS+ + D+D FK +NDT G Sbjct: 170 MNIARLTDAASLDPLTGCYNRREFQNQIQRSVSDATRHKKPLSIFMFDIDHFKRVNDTHG 229 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GDE+L+++S+ DN+R D + RYGG+EFI +L E ++++ + A+R+R +++ + Sbjct: 230 HPAGDEVLKEISRLVADNIRRGDTLARYGGEEFIAILPETAKHKAIELADRLRLKIQSKE 289 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 +K +G +I ++ S G A + H D RL++ ADE LY +K GRNRV Sbjct: 290 IKTDSG-NIKVTASFGIAELHPHADSSRLVKDADEMLYKSKLSGRNRV 336 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 103/179 (57%), Gaps = 4/179 (2%) Query: 282 LLRELFEEVSR--HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 L+ EL E S+ H D LT L NRR L ++++ + R G S++++D+D FK Sbjct: 339 LVNELAEANSKLAHLARTDTLTGLPNRRALEEALEQQLQRSRRNGEQASLVLLDIDHFKV 398 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 +ND +GH+ GD ++R + +A + +R+ D R+GG+EF++VL E AER+R+ Sbjct: 399 VNDRYGHDAGDAVIRALGKAMSETIRNVDVAGRWGGEEFLVVLANVDEEGAAAFAERLRT 458 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 RVE + + + ++S+G A + P E ++ ADEALY AK GRNR + +A Sbjct: 459 RVESSTVAHGE-LHVRYTISLGVAPLST-PHREAWLKRADEALYRAKLDGRNRTAIAQA 515 >UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP43_9GAMM Length = 336 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 5/192 (2%) Query: 267 KFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTP 326 + L Q ++ LR+ EE+ R D LT + NR+ T + E+A A R P Sbjct: 143 RRLRQEAALRQEVEATLRQQQEELVR-LASTDALTGVWNRQKFKTEAEHEVARAERYNLP 201 Query: 327 LSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEAS 386 LS++ +D+D FKE+ND +GH TGD ILR++ Q +R SD + R+GG+EF+I++ A Sbjct: 202 LSLIFLDLDYFKEVNDRYGHATGDAILREMCQRLQACLRESDRLGRWGGEEFLILVPHAD 261 Query: 387 ENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAK 446 + AE++R + T AA+G+ +S+S+G E L++ AD ALY AK Sbjct: 262 SDRAALLAEKLRQAIADTP--AAHGQ--PMSISLGVVSREPGDALEDLVRKADAALYRAK 317 Query: 447 RRGRNRVELWKA 458 RGRNRVE+ +A Sbjct: 318 ARGRNRVEVHRA 329 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 112/214 (52%), Gaps = 4/214 (1%) Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRF 308 F + ++ R R + LL+ ++ + E ++ R + D LT L NRR+ Sbjct: 142 FQRNLQLRRVREELRTREQELLKANQSLV-VNLQEIEALQQQLREQASRDSLTALYNRRY 200 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV-RSS 367 L T RE+A R G PLS+++IDVD FK+ ND GH GD+ L V++ + R+S Sbjct: 201 LDTTLDRELASCKREGKPLSLIMIDVDDFKKYNDLHGHQAGDQCLIAVAKTLQASAKRAS 260 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF-- 425 D RYGG+EF++VL AE +R VE K+ ++++SIG A+ Sbjct: 261 DLAARYGGEEFLLVLPGMDATAAQGLAEELRRSVEALKIPHEQSRGGSVTISIGLAVMTN 320 Query: 426 NGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + H D L++ ADEALY AK GRN+V L + Sbjct: 321 DSHKDVAGLLRAADEALYHAKHGGRNQVRLATQT 354 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 81/314 (25%), Positives = 133/314 (42%), Gaps = 41/314 (13%) Query: 172 FSLLENAEEEKE-RQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFS 230 S+ + E+E Q A +LS ++ +S+ ++ + + + ++G + Sbjct: 118 LSIQRDVTHERELEQEARLLSTAVE---------SSAASILITDTEGCIVYVNRGFEQIT 168 Query: 231 GIAEVGHIS-------------RLIQDFDGIFN--QTMRNTRNLNNRSLRVKFLLQ---- 271 G + R +D +T R T NRS + +L Q Sbjct: 169 GYRRDEVLGETPAVLNSGEQSARFYRDLWTTLERGETFRGTFLNRNRSGALFYLEQSITP 228 Query: 272 IRNTVSQIITLL--------RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRT 323 +R Q++ + R EE + D LT L NR + +R+ R Sbjct: 229 VRADQGQVVRYVATGKDITERVRMEEELKRAATTDALTGLANRLSFEQLLERDYERCRRY 288 Query: 324 GTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLT 383 G LS+L+ D+D FK +ND GH GD +L+ ++ NVR++D V R+GG+EF+++L Sbjct: 289 GGALSLLMFDLDHFKAVNDAHGHEAGDAVLQALAGLVLANVRTADTVARWGGEEFMVLLP 348 Query: 384 EASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALY 443 E AE++R RV + ++ S G L++ ADEALY Sbjct: 349 ETPLAAAGELAEKLRERVAAHRFPHGA----PVTASFGVCALRDDDTCRTLVRRADEALY 404 Query: 444 IAKRRGRNRVELWK 457 AK GR+RVE Sbjct: 405 RAKHLGRDRVECLS 418 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 100/172 (58%), Gaps = 1/172 (0%) Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 E R++ D LT L NRR+L ++I + RT +P+S+L++D+D FK+INDT+GH Sbjct: 528 LRENLRYQSMRDPLTGLYNRRYLEDFLLKQIHQSERTKSPISLLMLDLDHFKKINDTYGH 587 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 + GD L+++ + +++R D RYGG+EFI+ E AE IR V + ++ Sbjct: 588 DAGDVALKELGKILQEDIRVGDIAARYGGEEFIVAFYNTDEKTIKTRAESIREAVSRLQV 647 Query: 407 KAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWK 457 K +++SIG A++ + LI+ AD+ALY AK G+NR+ L+ Sbjct: 648 KYGAQPVGPITVSIGVAVYPTDGRNTNELIESADKALYFAKTNGKNRIVLYS 699 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 8/188 (4%) Query: 276 VSQIITLLRELFEEVSR---HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLII 332 +++ L E+ E + R G D LT L NRR + +E+ R PLS+LI Sbjct: 329 IARHFNKLLEVVERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIPKPLSLLIF 388 Query: 333 DVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLR 392 D+D FK +NDT+GH TGD +L++++Q VR +D R+GG+EF+++L + + Sbjct: 389 DIDHFKRVNDTYGHETGDLVLKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTAEAAMA 448 Query: 393 TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRN 451 AE++R +E+ ++ S G A F+ E L++ D+ALY AKR+GRN Sbjct: 449 LAEKLRQAIEEHDFPRVG----RVTASFGVAAFHDGEQEESALLRRVDKALYQAKRQGRN 504 Query: 452 RVELWKAS 459 RV W A+ Sbjct: 505 RVVNWAAA 512 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 98/177 (55%), Gaps = 6/177 (3%) Query: 279 IITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 + LR + ++ D LT L NRR + + E+ A R P ++L+ D+D FK Sbjct: 185 MFAYLRRHYAQM-HQMAHTDALTNLTNRRAMQQKLEGELDRARRYNRPFALLLADLDHFK 243 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 +INDT+GH+ GD++LR+V+ ++R SD + R+GG+EF+I+ E + A+R+ Sbjct: 244 QINDTYGHSVGDQVLREVAGRLAQHLRESDSLARWGGEEFLILAPETDLQQAYLLAQRLL 303 Query: 399 SRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + ++ + + ++LS+G A + L+ ADEA+Y AK GRN++ L Sbjct: 304 GAIRESPIS-----GVQVTLSLGVACYRQGDSIAALLSRADEAMYRAKAGGRNQIVL 355 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 6/198 (3%) Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 N S + + I ++ I +EL D LT L NRR ++ K E+ + Sbjct: 351 NSSNEITGICGISTDITPIKHYQKEL-----ERLSQFDELTNLFNRRHFFSLAKHELNRS 405 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 +R + LSV+++D+D FK IND GH TGD +L + + D++R SD R GG+EF I Sbjct: 406 SRYRSKLSVMMLDIDHFKRINDGHGHKTGDLVLANIGKQIGDSLRDSDIAGRMGGEEFAI 465 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAM-FNGHPDYERLIQIAD 439 +L E + AER+R +V +T L +G + +LSIG A + D E L+ AD Sbjct: 466 LLPETDLEQASIMAERLRKQVAETWLDIGDGRTLNCTLSIGLATKSDQQIDLENLLHQAD 525 Query: 440 EALYIAKRRGRNRVELWK 457 ALY AK GRN+V Sbjct: 526 TALYAAKNSGRNKVSCAD 543 >UniRef50_C5T761 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T761_ACIDE Length = 398 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 67/183 (36%), Positives = 106/183 (57%), Gaps = 3/183 (1%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 I + RE + + + +D LT + NRR L +R +A A R P+++L++D+D+FK Sbjct: 207 ILMGRERADAEHQQQALLDPLTGVPNRRALMAELERTLAQAVRERRPVALLMMDIDRFKR 266 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 +NDT+GH GD +L V+Q +R D++ RYGG+EF+ +L AE +R+ Sbjct: 267 VNDTYGHVAGDAVLAAVAQCLKGGLRGQDFIGRYGGEEFLALLPGTDAAGAGVVAEHLRA 326 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWK 457 RVE+ + EDI +++SIGA + ++ +AD+A+Y AKR GRNRVE Sbjct: 327 RVERLTMP-WEPEDIRVTVSIGAHTRVPDEGTGAQAMVDVADQAMYAAKRAGRNRVERLD 385 Query: 458 ASL 460 A+L Sbjct: 386 AAL 388 >UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y5_9PROT Length = 671 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 64/172 (37%), Positives = 99/172 (57%), Gaps = 1/172 (0%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ FE+ +D LT L NRR + ++EI R G PL+++++DVD FK+INDT Sbjct: 497 RKKFEQELERRAQIDALTSLNNRRHFYELAEQEILRTKRYGKPLALMMLDVDHFKDINDT 556 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+ GD +L+ + +R D + R GG+EF I+L EA+ + AER+R V Sbjct: 557 YGHHVGDTVLQTLGAVCLQTMREIDIIGRLGGEEFAILLPEATAAQAFDAAERLRLAVAA 616 Query: 404 TKLKAANGEDIALSLSIGAA-MFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + G+ ++ ++SIG + D +++ ADEA+Y AKR GRNRV Sbjct: 617 IAMPLEQGQTLSFTISIGVTGLVAKDSDIADMLKRADEAMYQAKRSGRNRVC 668 >UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPL1_PSEMY Length = 557 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 4/208 (1%) Query: 252 TMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL--FEEVSRHEVGMDVLTKLLNRRFL 309 + + + + + R L++ ++ LR + E R + D LT L NRR+L Sbjct: 340 LLGHMLYVRDVTQRHLSELKLAEALALSEERLRTISNLHEQLREQALCDPLTGLYNRRYL 399 Query: 310 PTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDY 369 F RE+A A R PL++ +ID+D FK +ND GH GD++L+ V++ DN+RS+D Sbjct: 400 DEFFSRELARAQRENLPLALALIDLDHFKRLNDECGHLVGDDVLKAVAKHLLDNLRSTDA 459 Query: 370 VFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP 429 VFR GG+EF+++L E + I S++ + G+ ++LS G A + Sbjct: 460 VFRIGGEEFLLILPGVDPVEACERLQNICSQLAGQSIATRGGDQ-QVTLSAGLAHWPQQG 518 Query: 430 -DYERLIQIADEALYIAKRRGRNRVELW 456 E L+ AD ALY AKR GRNRV Sbjct: 519 VVLEELLHAADAALYQAKRGGRNRVCCA 546 >UniRef50_B5YAI6 Ggdef domain n=2 Tax=Dictyoglomus RepID=B5YAI6_DICT6 Length = 1073 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 3/185 (1%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 + L I N +S I + L E ++ +D LT +LNRR L F +++ A R Sbjct: 685 LNLLKTIANYIS--IAIENALLFEETKKLATIDPLTGILNRRALEEAFNKDVERAKRYNR 742 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 PLS ++IDVD FK NDT+GH GD++L+++++ ++ R +D V RYGGDEF I+L E Sbjct: 743 PLSAMVIDVDDFKLFNDTYGHLFGDQVLKELAKTLRNSCRKTDIVGRYGGDEFCIILPET 802 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYI 444 + + AER+ + + + I + +SIG A + + E+L+ +AD +Y Sbjct: 803 NLQGATKFAERLLKNIRNLTVVTPDNNKIPIKVSIGVASYPDDTYEPEKLLTLADTTMYK 862 Query: 445 AKRRG 449 AK G Sbjct: 863 AKTSG 867 >UniRef50_Q30WR5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WR5_DESDG Length = 361 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 125/256 (48%), Gaps = 19/256 (7%) Query: 204 SDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRS 263 +++ S L + G+ + + +L++D+ I N+ RN R L R Sbjct: 104 TNIFSELIHMLNEQGVLLRATQKKAAEARSTGSDNVQLLEDYMIINNELSRNKRELAIRH 163 Query: 264 LRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRT 323 Q++ S I EE+SR D LT NRR + EI + R Sbjct: 164 ------EQLKKAFSDI--------EELSR----TDPLTGACNRRKVIEFLSAEIDRSKRY 205 Query: 324 GTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLT 383 GTPLS+L +D+D+FK INDT+GH GD+ L + +R +D R GG+EF+ VL Sbjct: 206 GTPLSILSLDIDRFKAINDTYGHAAGDDALIAFCRVCRQQLRKTDLFGRTGGEEFVAVLP 265 Query: 384 EASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALY 443 A+ + +AERIR VE+ + N + ++SIG A+ + + L++ AD ALY Sbjct: 266 HAACRDAQISAERIRRHVEQIHI-TYNNACVRFTVSIGIAVHEAGENTDTLLRRADAALY 324 Query: 444 IAKRRGRNRVELWKAS 459 AK GRN V + + S Sbjct: 325 RAKTAGRNTVSVAEKS 340 >UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilus RepID=Q5SHT9_THET8 Length = 360 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 5/176 (2%) Query: 279 IITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 ++ L+E + E + + D LT L NRR+L I +RE+ R G PLS++++D+D FK Sbjct: 186 LLVRLKEGYMEA-QLDAYTDFLTGLRNRRYLELILERELFRLQRYGRPLSLVLLDLDGFK 244 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 +ND GH GD +L+ ++Q ++R SD R GG+EF ++L E + LR AER+R Sbjct: 245 AVNDLHGHEVGDRVLQALAQRIEAHLRRSDRAVRLGGEEFALLLPETPLPQALRLAERLR 304 Query: 399 SRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 VE + ++ S G A L++ ADEA+Y AKR+G+NRVE Sbjct: 305 RAVEAMAVPPVA----RITASFGVAEARPTDTPLTLLRRADEAMYRAKRKGKNRVE 356 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 2/172 (1%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ E RH D LT LNRR ++E+ A+R G +SVL+ID+D FK++ND Sbjct: 304 RKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDIDHFKQVNDR 363 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 GH GD+ L+ + A N+R D R GG+EF +L E + L AER+R VE Sbjct: 364 HGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVAERLRQAVEA 423 Query: 404 TKLKAANGE-DIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRV 453 L + + + L+ S+G A ++++ AD ALY AK GRNRV Sbjct: 424 IALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEGRNRV 475 >UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM24_DESAH Length = 488 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 1/199 (0%) Query: 256 TRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKR 315 + N L + F I + + L F++ D LT + NRR I + Sbjct: 280 AKVRNTLVLNLVFSFGIIGLILIVTNLTIASFQKRLTKMASTDKLTGVYNRRAFDIIIDQ 339 Query: 316 EIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGG 375 + R TPLS+++ D+D FK +NDT+GH GD I++ +R+SD + R+GG Sbjct: 340 TLKEIQRKQTPLSIILFDLDHFKRVNDTYGHLAGDYIIQTTVGTAARTIRNSDILCRWGG 399 Query: 376 DEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLI 435 +EF+I+L + ++TAE+IR+ V + + + I +++S+G G E L+ Sbjct: 400 EEFLILLKGCDLGDAMKTAEKIRTAVASQPARYGDDQ-ICVTISVGVTEHTGQDTKETLL 458 Query: 436 QIADEALYIAKRRGRNRVE 454 + AD+ALY+AK G+NR E Sbjct: 459 KRADKALYLAKASGKNRCE 477 >UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXG9_HALOH Length = 499 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 12/234 (5%) Query: 229 FSGIAEVGHISRLI------QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITL 282 I E I +I ++ G N + +L L+ FL N S + L Sbjct: 272 LDNIEEGKEIEYIIVPVTRGKELIGSINIFSMDKGHL--PILQHSFLESFANQFS--VAL 327 Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 L + D LT L N + + PL+++I+D+D FK++ND Sbjct: 328 QNALLYKKQEEMANRDGLTGLYNHAYFQNRLHLLLK--QENKHPLTLIIMDIDNFKQVND 385 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH GD++L++++ N+R D + RYGG+EF I+L E + A+R+R + Sbjct: 386 RFGHLVGDKVLKELAHLLKHNLREGDLIARYGGEEFAIILPETELKQGEFIAKRLRKLIS 445 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 ++ N + +++SIG A +N E I AD+ALY AK G+NRV L Sbjct: 446 DNEIVLDNNRSLYITVSIGVAQYNKKWSQEEFIDKADQALYKAKEAGKNRVTLA 499 >UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax=Pseudomonas fluorescens RepID=Q3KAB6_PSEPF Length = 559 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 122/241 (50%), Gaps = 14/241 (5%) Query: 222 NHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 N++ +F V I++L Q D + + R L + + TV+Q Sbjct: 324 NNQPGAHFPLRHPVREIAQLGQSIDAMTQSLLAKERELQETNA------SLEATVAQRTA 377 Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 L E+ + D LT + NRR RTG P ++L+ID D FK IN Sbjct: 378 ALTLANAELL-NLATHDGLTGVYNRRRFDEKLTEYSLLFRRTGRPFALLLIDADHFKRIN 436 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL-RTAERIRSR 400 DT GH GD++LR+++Q ++RS+D+V RYGG+EF ++L E ++ +T AE+IRS Sbjct: 437 DTHGHAAGDDVLRQLAQLIQISIRSTDFVARYGGEEFAVLLPEIAKPDTPDIVAEKIRSA 496 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKAS 459 + + A +++SIG ++ + L++ AD+ LY AK GRN+V +AS Sbjct: 497 IAEADFPAVG----PVTVSIGVSLADPADNTPTTLVKRADQQLYKAKAAGRNQVAC-QAS 551 Query: 460 L 460 L Sbjct: 552 L 552 >UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW86_DESAD Length = 555 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 6/175 (3%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 + + D LT L NRR+L R + A R G P S++I+D+D FK INDT+GH Sbjct: 370 QELQKSAVTDQLTGLPNRRYLMKEGTRLVDIAIRAGQPCSLMIMDIDHFKVINDTYGHTV 429 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD +L+++S+AF + VRSSD + RYGG+EF++V + + AER+R VE ++ Sbjct: 430 GDIVLQQISKAFQEVVRSSDIIARYGGEEFVVVAPGSDIDSGRTLAERLRQSVEA-RIFN 488 Query: 409 ANGEDIALSLSIGAAMFNGH-----PDYERLIQIADEALYIAKRRGRNRVELWKA 458 + + + ++SIG + + YE ++ AD ALY AK GRNR+ + + Sbjct: 489 NDEQPLTCTISIGVSHYATDIKFGVDAYEDMLARADNALYKAKDTGRNRICIAEP 543 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 96/169 (56%), Gaps = 2/169 (1%) Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 D LT + NRR + E A A R G PLSVL++D D FK INDTWGH GD Sbjct: 507 LEQLATTDELTGVANRRHFMARLEDEAARAQRYGRPLSVLLLDADHFKSINDTWGHEAGD 566 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 +LR ++ ++R +D + R GG+EF ++L E ++ LRTAERIR+ VE + + Sbjct: 567 MVLRHITDVMGLSLRENDLIGRLGGEEFGVLLPETAQERALRTAERIRAAVEDAPVAVRD 626 Query: 411 GEDIALSLSIGAAMFNG-HPDYERLIQIADEALYIAKRRGRNRVELWKA 458 + ++S+GAA + G + + LI+ AD L AK GRNRV +A Sbjct: 627 -VWVGCTVSVGAAEYRGANDSLDDLIRRADHMLMRAKEEGRNRVCAQQA 674 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 112/237 (47%), Gaps = 3/237 (1%) Query: 225 GRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQ--IITL 282 H + H+ ++ +GI + + + V++ +++L Sbjct: 372 CPHVLASPTPGRHLCLPLKGSEGILGVLQVHWLPERDADDDNDARVDFAKGVAEDMVLSL 431 Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 E D LT L NRRFL RE+A A R PL VL++D+D FK IND Sbjct: 432 SNVRLREQLEEASIRDALTGLYNRRFLDETLARELARAERQAVPLCVLMLDIDHFKPIND 491 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH GD L V++ +VR D V RYGG+EF+I++ A + R + +R V Sbjct: 492 DYGHALGDRALVAVAELLNAHVRRDDIVCRYGGEEFVIIMPGAGLDAAQRRGDHLRRCVS 551 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVELWKA 458 ++A I L++S+G A + H D E L+ AD ALY AK+ GRNR+ + Sbjct: 552 ALDVEANVPAPIRLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQGGRNRLTIASP 608 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 2/168 (1%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E D +T + NRR T+ RE A A R G PLS L+ID+D FK IND +GH Sbjct: 159 EELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDIDHFKSINDDFGHQV 218 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD+++ +++ D R D + R GG+EF ++L E + L AER+R V + L Sbjct: 219 GDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVAERLRGEVAASSLLM 278 Query: 409 ANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVEL 455 A+G + ++SIGAA D L++ AD ALY AK GRNRV Sbjct: 279 ASG-SVRATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNRVVC 325 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 5/185 (2%) Query: 274 NTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIID 333 +TV++ IT R+ E+ R+ D LT L NRR +RE+ A RTG P+SV++ D Sbjct: 506 STVAEDITE-RKRREQALRYRASHDGLTGLYNRRHTQRALERELRLAARTGHPVSVVLFD 564 Query: 334 VDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRT 393 +D FK +NDT GHN GD++LR+++ + VR +D V R+GG+EF++VL E + Sbjct: 565 LDHFKRVNDTHGHNAGDQVLRQLAGLVTERVRDTDIVGRWGGEEFLLVLPGTDETGAGQL 624 Query: 394 AERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 AE +R+ V + + + +++S+G A + L + D+ALY AK GRNR Sbjct: 625 AEVLRAYVAEARFPIPD----PVTISLGYAQAGADEGADALFKRVDQALYAAKANGRNRA 680 Query: 454 ELWKA 458 + KA Sbjct: 681 QAAKA 685 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 16/235 (6%) Query: 220 WFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 WFNH E + + + IF N + I Sbjct: 395 WFNH----VIQNKHEPHYAKVQLNGKEYIFLVKATEISNAYGDQYVSVLMTDITE----- 445 Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 E ++ H + D LT + NR + ++EI R +P S+ +D+D FK Sbjct: 446 ----EEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDIDHFKM 501 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 INDT+GH+ GD +L +++ +RS+D R GG+EF+I++ E S L +ERIRS Sbjct: 502 INDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLENALIISERIRS 561 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 VE ++ +++S+G N + + + ADEALY AK GRNR+E Sbjct: 562 TVEGI---SSKDVPEKITISMGLVELNSWDNVQSFYKRADEALYKAKENGRNRIE 613 >UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZ69_9AQUI Length = 419 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 103/436 (23%), Positives = 187/436 (42%), Gaps = 30/436 (6%) Query: 31 AVAHAHYLSIEF-YRIVRIDPHAEEF---LSNEQVERQLKSAMERWIINVLSAQVDDVER 86 + L++++ Y D + F +S + ++ + + +R+I D Sbjct: 3 VLKEKIDLALKYVYNYYLNDDYMYRFFKGISFKDIQHYINTGFKRYISG-------DTNE 55 Query: 87 LIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDI 146 + V + + +P L+ L S E L + D+ Sbjct: 56 AKRYFFKVGDTFYKENVPFSFFYDSINKLRYYL---------SKDETLNCAEYVDKLEDM 106 Query: 147 ---AMEVMTRAFTFSDSSASK--EDENYRIFSLLENAEEEKERQIASILSWEIDIIYKIL 201 A + + + K E RIF N + W ++ I Sbjct: 107 TYFAENTFSYGYLVNLMKNDKDWIREELRIFKGKGNVSILSGYVKDHFI-WLNKLLEDIK 165 Query: 202 -LDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLN 260 L S L + +FG N+ + + R+ N+ Sbjct: 166 KLRSKPSIELNPNICEFGKKINNGDLDSILTLKYKDIVKRIHDSIHQSANEIYFFIEKRA 225 Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 ++L ++++ +NT S++++ + + S E +D LT L NRR + I + + Sbjct: 226 FKNLLIEYINLFKNT-SRLVSTIALVHSVSSEAEANIDPLTHLFNRRAMEIILTNQYTLS 284 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 TG + + D+D FK+INDT+GH GD +L++V+ +R SD+VFRYGG+EF+I Sbjct: 285 KITGNDFVIGLADMDDFKKINDTYGHLVGDCVLKEVAVRIKSVLRKSDFVFRYGGEEFLI 344 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIAD 439 +L ++ E L+ E++R + +K N I +++SIGAA +P+Y E+LI++AD Sbjct: 345 LLPYTTKREALKVLEKVRQSIIAEPIKCKNNM-IDITISIGAASLTENPEYLEKLIELAD 403 Query: 440 EALYIAKRRGRNRVEL 455 + LY AKR G+N+V + Sbjct: 404 KRLYKAKRTGKNKVVV 419 >UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLY1_DESAH Length = 440 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 126/239 (52%), Gaps = 11/239 (4%) Query: 216 DFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNT 275 + W + +++ SG I D F + + +++ + N Sbjct: 207 EVFPWLDKSFKNFISGTDTKKTFETAINDKGQFFFISFSRSLDISGK---------FSNA 257 Query: 276 VSQIITLL-RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 ++ I + R+ E+ D LT NRR +F++E+ + R L++++ID+ Sbjct: 258 IAIIEDITKRKTMEKELEKLATTDPLTGAKNRRSFLNLFEKEMKRSKRYNYTLALVMIDI 317 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FK+IND +GH TGD+IL + + +R SD R+GG+EFII+L E + A Sbjct: 318 DHFKKINDNFGHETGDKILNLLVAKCHSVLRDSDIFARWGGEEFIILLPETDLLQASSAA 377 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNR 452 ER+R + +++L+ +G +I ++SIG +F N + + +I+ AD+ALY+AK++GRNR Sbjct: 378 ERLRGALAQSELRTNDGTNINFTVSIGFTIFGNKNILIDEIIKKADKALYLAKKQGRNR 436 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 112/248 (45%), Gaps = 8/248 (3%) Query: 212 LSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQ 271 L + F W F V I+ + I +++TR + + + Sbjct: 79 LHNSAFTTWEQRPYLFKFKNYRPVTGIADFMYQNSTII--PLKDTRGKVEHICLIVYDVT 136 Query: 272 IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 I E+SR D LT LLNR+ ++E R P S+++ Sbjct: 137 EVAVNRLQIQAANLQLHEISR----TDGLTGLLNRKTWELDAEQEYKRFKRHEHPCSLVM 192 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 D+D FK IND++GH GDE++R+ + A +R D RYGG+EF IVL++ L Sbjct: 193 FDIDHFKNINDSYGHPAGDEVIRQTAAAVKSCIRDIDIAGRYGGEEFTIVLSDTDTEGAL 252 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGR 450 AERIR+++++ + + I ++S+G A + I AD+ALY AK+ GR Sbjct: 253 VVAERIRNQIQELTVHYEDFA-IQFTVSLGVAQLTQQMTNRTAWIDCADKALYQAKKNGR 311 Query: 451 NRVELWKA 458 N ++ Sbjct: 312 NNSVVYTP 319 >UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n=3 Tax=Zymomonas mobilis RepID=Q5NP17_ZYMMO Length = 1008 Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 17/284 (5%) Query: 186 IASILSW----EIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRH-YFSGIAEVGHISR 240 S+L + +I Y++L +LP F ++ + H F+ A + I + Sbjct: 724 RFSLLDYGFSRQIHYSYRLLGQDSEWLNLPAGSVPFVIYSHLPAGHFTFALRATIPGIKQ 783 Query: 241 LIQDFDGIFNQTMR-NTRNLNNRSLRVKFLLQIRNTVSQIITLLR--------ELFEEVS 291 I + N R +L + +L + + +S I LR EL E Sbjct: 784 PILETHFPVNVEYRWYEYRFVKIALIIILVLFLYDLISNQIRKLRLMITNKTLELQETNL 843 Query: 292 R--HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 R D LT LLNRR +F++ A ++T SV I+D+D FK+IND GH G Sbjct: 844 RLKELANTDELTGLLNRRAFTEMFEKNCAQFSKTKDQFSVFILDIDFFKKINDNEGHLAG 903 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +++ ++Q +N+R D+ RYGG+EF+I+L A T + A RI + + + + Sbjct: 904 DAVIQYIAQKITENIRQQDFAARYGGEEFVIMLPNADMETTCQVASRIGNAISEKPVPY- 962 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 G +I +++SIG A+ + D L++ ADE LY+AK +GRNRV Sbjct: 963 QGREIPVTVSIGVAVMKENDDANSLLERADERLYMAKNQGRNRV 1006 >UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ARY2_PELPD Length = 355 Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 102/180 (56%), Gaps = 2/180 (1%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 I++ F E + D LT L NRR+ + +E A+R G P S+++IDVD FK Sbjct: 172 ISIENAKFHEETHQLAINDSLTGLNNRRYFDKVLPQEYERAHREGLPFSLMMIDVDNFKL 231 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 NDT GH+ GD IL + + +RS D+ FRYGG+EF+++L E + AERIR Sbjct: 232 FNDTHGHHLGDRILATIGRVLRKTLRSIDFAFRYGGEEFVVILPETDLESAHKVAERIRQ 291 Query: 400 RV-EKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRNRVELWK 457 RV +++ N +D +++S+G + + L+ +AD+ LY AKR GRNRV + + Sbjct: 292 RVMAESRKLLRNPQDRPVTVSVGISCYPRDAACSITLLAMADQLLYQAKRTGRNRVLVAE 351 >UniRef50_Q1N5E1 GGDEF domain protein n=1 Tax=Bermanella marisrubri RepID=Q1N5E1_9GAMM Length = 311 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 1/207 (0%) Query: 250 NQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE-EVSRHEVGMDVLTKLLNRRF 308 Q + R + + + +I LR + ++ D LT NR Sbjct: 95 GQGLGEITFFRTTRFREHEMANLEALMGTLIYPLRNAMRYRSALNQAFKDPLTGAGNRIA 154 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 L +RE+ A R G L++L++D+D FK IND +GH GDE+L+ VR +D Sbjct: 155 LNESLQREMELAKRHGHDLAILMLDIDHFKTINDRFGHLVGDEMLKATVNTITQCVRQTD 214 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH 428 FRYGG+EF+++L + AERIR V +T L+ + + ++S G ++++ + Sbjct: 215 ICFRYGGEEFVVILNNCNIANARLIAERIRMDVSETVLQTQDDNFLQATISCGLSVYDAN 274 Query: 429 PDYERLIQIADEALYIAKRRGRNRVEL 455 E LI AD ALY AK GRN+V + Sbjct: 275 DTLENLIHRADIALYKAKNSGRNKVCV 301 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 2/170 (1%) Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 + +D LT + NRR+ +R++ + PLS++++DVD FK NDT GH Sbjct: 149 QRKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTHGHQ 208 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GDE L ++ ++R D RYGG+EF +VL + AER+R+ VE ++K Sbjct: 209 GGDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEALEIK 268 Query: 408 AANGEDIA-LSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVEL 455 G ++ +++S+G A +G LI AD ALY AK +GRNRV + Sbjct: 269 DDEGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVV 318 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 4/209 (1%) Query: 251 QTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE--EVSRHEVGMDVLTKLLNRRF 308 Q TR+ + ++ + Q+R + L ++ E D LT + NRR Sbjct: 257 QAFHTTRSFSTVYSQMDMMAQLREQQAWTQEALLQVQEANRKLEQLASTDALTGVANRRQ 316 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 L E+ + R G PLS+L +D+D FK IND +GH GDE+L++V++A ++R SD Sbjct: 317 LVERADMEVPRSERHGAPLSLLCLDLDHFKRINDDYGHLAGDEVLKQVAEAIQQSLRPSD 376 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF-NG 427 + R GG+EF ++L + AERIR ++E + G + +++S+G A Sbjct: 377 LLARVGGEEFHVLLPDTDLAGARDVAERIRVKLEGLDIP-VQGVVLHVTVSVGCAQLGPD 435 Query: 428 HPDYERLIQIADEALYIAKRRGRNRVELW 456 D + L ADE LY AK GRNRV + Sbjct: 436 GADMKSLTHTADERLYQAKALGRNRVVIA 464 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 102/189 (53%), Gaps = 4/189 (2%) Query: 270 LQIRNTVSQI--ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 L++ N + Q I + + +D LT + NR + + E A+A + L Sbjct: 361 LRLLNIIGQQVGIAMENVELYQRMHEMATIDSLTGIYNRLYFQERLREEFANAKKENYDL 420 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 S+ I+D+D FK NDT+GH GD++L+ ++ ++RS D + RYGG+EF+I+L S Sbjct: 421 SLAIMDIDHFKRFNDTFGHLFGDKVLKHIAHLMKKSLRSGDIIARYGGEEFVILLPRTSV 480 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAK 446 E ER+R+ V KT +K + ++++S G + + + E L++ AD ALY AK Sbjct: 481 KEAYDKVERLRNIVAKTTIK-DELVEASVTVSFGVSSYPEFANTESELLKTADNALYDAK 539 Query: 447 RRGRNRVEL 455 GRN V + Sbjct: 540 ESGRNCVRI 548 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 94/172 (54%), Gaps = 1/172 (0%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ E R D LT NRR E+ ANR G PL++L++DVD FK IND Sbjct: 400 RKAMERELRRLATTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLMLDVDYFKSINDA 459 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 GH TGD+ LR++ + +R D + R GG+EF ++L E L TAER+R++V Sbjct: 460 HGHGTGDDALRRLVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGALITAERLRAQVAD 519 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVE 454 +L +G +A ++SIG A E ++ AD+ALY AK GRNRV Sbjct: 520 LRLDLPDGGQLAFTVSIGIAAPRAEDGSVEAVLARADKALYRAKDEGRNRVC 571 >UniRef50_A7BV03 Sensor protein n=2 Tax=Beggiatoa sp. PS RepID=A7BV03_9GAMM Length = 866 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 4/166 (2%) Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 + + E +D LTK+ NR + +E++ A R LS++I D+D FK INDT+GH TG Sbjct: 694 IKKREATIDGLTKVYNRNYFDMYLAQEVSRAKRYKRELSLIITDIDLFKNINDTYGHLTG 753 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +L++ +Q R SD V R+GG+EFII+L E AER+ R++ + Sbjct: 754 DTVLQEFTQIIMQQCRRSDLVARFGGEEFIILLPETPLKGGTIVAERMCQRIDAHIFQEV 813 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++ S G A D L++ AD ALY AK+ GRN+V + Sbjct: 814 E----HITASFGVASLITDRDGRELLRRADSALYQAKKNGRNQVVV 855 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 64/171 (37%), Positives = 93/171 (54%), Gaps = 4/171 (2%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + V D LT L NR L +F+RE+ A R P S++I+D+D FK +ND Sbjct: 307 KRMNAVLERLARTDPLTDLPNRSRLNELFRREVERAQRYRRPFSIVILDIDHFKRVNDEL 366 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH GD L+ + D+VR +D V R+GG+EF+++ E + E ++ AER+R + T Sbjct: 367 GHLAGDRTLQVFAGVVRDSVRGTDTVGRWGGEEFLVLCPETTAEEAVQLAERLRGSLRAT 426 Query: 405 KLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + G I +LS G A F + L+ AD ALY AK GR+RVE+ Sbjct: 427 QF---EGGRIH-TLSAGVAAFREGDSVDTLLHRADTALYRAKNGGRDRVEV 473 >UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B074_SULD5 Length = 172 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 3/169 (1%) Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 + + E D LT L NRR+ E+A + R PL+++++DVD FK+INDT+GH G Sbjct: 1 MLKQESITDGLTGLRNRRYFDQRISEEVALSRRYKLPLTLMLVDVDHFKKINDTYGHTVG 60 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 DE+L+K+SQ VR SD V RYGG+E +I+ ++ + AER+R +VE+TK+ Sbjct: 61 DEVLKKLSQIILSVVRDSDIVARYGGEEIVIITPNTTKEDAGILAERLREKVEQTKVATI 120 Query: 410 --NGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVEL 455 E + +++SIG + D E L++ +D+ALY+AK+ GRNRV + Sbjct: 121 ATTQEVVQVTISIGVCALSAVITDQEALLEESDQALYLAKKYGRNRVVI 169 >UniRef50_Q1MZ89 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q1MZ89_9GAMM Length = 577 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 89/318 (27%), Positives = 146/318 (45%), Gaps = 29/318 (9%) Query: 147 AMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDL 206 A+E+++ + S +E E + L+N ER +A + +W + DL Sbjct: 260 ALEILSDLVVSALGSEQEEFEAF-----LKNLN---ERLLA-LKAW-------LKQGEDL 303 Query: 207 GSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR----LIQDFDGIFNQTMRNTRNLNNR 262 S +F L I E G + + Q D +F + L + Sbjct: 304 EQKFSDSSTEFDLKMRGH-LDELKQILESGDTNAMKGAVTQQLDDVFATL--DGFKLEQK 360 Query: 263 SLRVKFLLQIRNTVSQIITLLRELFE-----EVSRHEVGMDVLTKLLNRRFLPTIFKREI 317 S + F I +++ T+ +EL E S+ + D LT L NR ++E Sbjct: 361 SREIVFKEHIGELNNRLTTMEKELEEAKEQLNQSQLKAMTDSLTGLPNRGAYDVYAQQEY 420 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 R G LS+++ DVDKFK INDT+GH GD++L+ +S+ R +D + RYGG+E Sbjct: 421 ERYKRYGGELSLIVCDVDKFKSINDTYGHQAGDKVLQLISRQVKKGTRETDLLARYGGEE 480 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQI 437 F+++L E + + + AE+I V + G+ + +++S G A F E++ Sbjct: 481 FVVLLPETKQEDAVSVAEKIIEAVATSPF-HFRGKRVQITISCGVASFKKGYRPEQVFDA 539 Query: 438 ADEALYIAKRRGRNRVEL 455 AD ALY AK GRN+ +L Sbjct: 540 ADAALYRAKENGRNQYQL 557 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 2/176 (1%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ E D LT L NRR + + E A R +P+++L++D+D FK IND Sbjct: 346 RKEAESRLLQMAATDELTGLYNRRRFFELARGEFNRAKRYSSPMTILLLDIDYFKRINDE 405 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+ GD LR + +RS D + R GG+EF+ +L E + + R AERIRS +E Sbjct: 406 YGHDAGDTALRCIVSMIASQLRSLDVLARLGGEEFVALLPETHQFDAERIAERIRSEIES 465 Query: 404 TKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWKA 458 T + + +++SIG A ++ D LI ADEA+Y AKR GRN+V L Sbjct: 466 TAINLFE-TTLFVTVSIGVAGYSKEMQDVGELINRADEAMYRAKRDGRNQVCLATP 520 >UniRef50_A6Q482 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q482_NITSB Length = 458 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 118/256 (46%), Gaps = 8/256 (3%) Query: 203 DSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNR 262 S L S + G ++K + + I FD + + L + Sbjct: 210 GSKLLSLDSIYSIQLGK--HYKAYRFVTKNENEQTIGLCFILFDPTEMLETEDIKILESL 267 Query: 263 SLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 +L +I LF++ D LTKL NR +L + E A R Sbjct: 268 QKLFSIMLTKEREFYRIKKEEAHLFQK-----AITDGLTKLYNRYYLDKFIESEFEKAKR 322 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 PLSV++ID+D FK IND++GH GD +L+ ++ NVR SD VFRYGGDE +IV+ Sbjct: 323 YNYPLSVVMIDLDFFKRINDSYGHEVGDMVLKAFAEFLKKNVRKSDVVFRYGGDELLIVM 382 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEA 441 ++ ERIR+ + + I + S G A + + D + LI+ ADEA Sbjct: 383 PFTDLHQARDVMERIRNLLHQKGTLQFGDIKITYTFSAGIATIDENIKDAKELIKKADEA 442 Query: 442 LYIAKRRGRNRVELWK 457 LY AK+ GR+R+EL Sbjct: 443 LYKAKKLGRDRIELAN 458 >UniRef50_Q2W7A4 Response regulator n=4 Tax=Proteobacteria RepID=Q2W7A4_MAGSA Length = 634 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 104/180 (57%), Gaps = 2/180 (1%) Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 L + E R D +T L NRRFL +A+ +R + L+V+++D+D FK +N Sbjct: 449 LETKRLMETLRESSLSDPMTGLNNRRFLEEYVDTLVANVHRRKSALTVMMLDLDHFKMVN 508 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 DT+GH+ GD +L+ +S+ VR+SD V R+GG+EF+IVL + E + AE+IR+ V Sbjct: 509 DTYGHDAGDAVLKALSKVLRQAVRASDLVIRFGGEEFLIVLVDTPSAEADQVAEKIRALV 568 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVELWKASL 460 E ++ I ++SIG + F D + + ++ AD ALY AK GRNRV + S+ Sbjct: 569 EALVVQTGT-VTIRKTISIGLSDFPTDSDTFWQAVKFADVALYQAKENGRNRVVRFNESM 627 >UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIT1_HALO1 Length = 732 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 92/342 (26%), Positives = 139/342 (40%), Gaps = 39/342 (11%) Query: 146 IAMEVMTRAFTFSDSSASKEDENYRI--FSLLENAEEEKERQIASILSWEIDIIYKILL- 202 A ++ RA T + + D +I F L E ER+ +Y + + Sbjct: 390 HASAMLCRALTLEEVMETAFDAASQIVGFDLAAITIYEPERKR--------HRVYSVRVS 441 Query: 203 --DSDLGSSLPLSQADF----GLW-FNHKGRHYFSGIAEVGHISRLIQDF---------- 245 D+ L L+ +F GL K +HY E+ ++ + Sbjct: 442 DEDAPLIDPESLADLEFRDNTGLAAMVVKNKHYLPAGGELRDLTAPVYTKQVRLKEAESL 501 Query: 246 --------DGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGM 297 D M +R V+ +L I ++L + + Sbjct: 502 LVLPLLSGDEAIGTFMLASRERQQFGKDVREMLGII-ANQVAVSLQNGMMYKTMETMATT 560 Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L N R + + A RT P ++L+ DVD FK +NDT+GH GDE+LR+V+ Sbjct: 561 DGLTGLTNHRTFQDRLVQLLDRAERTRQPAAILLCDVDHFKNVNDTYGHPIGDEVLRQVA 620 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +VR D RYGG+EF +VL + AERIR V + + G ++ Sbjct: 621 GVLLRSVRKIDIPARYGGEEFAVVLEATDLEGAMNLAERIRKDVAALVVDSDKG-PFQVT 679 Query: 418 LSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRNRVELWKA 458 +SIG A F LI+ AD ALY+AK GRNR ++ Sbjct: 680 MSIGIASFPDDATDRAVLIERADSALYLAKESGRNRCMSYQT 721 >UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8X7_SULSY Length = 675 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 4/193 (2%) Query: 263 SLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 +V ++ + N S +++ LR + E+++ D LT L NRRF +EI + R Sbjct: 484 PEKVSYINDLINIFSPVLSNLRLI--EINKELSIRDPLTGLYNRRFALEFMNKEIEKSKR 541 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 G PLS+++ID+D FK+IND GH+ GD IL+ S +R SD R+GG+EF+++L Sbjct: 542 NGKPLSIVMIDLDDFKKINDIHGHSAGDNILKIFSDVLKKELRKSDISCRWGGEEFLLIL 601 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEA 441 E S+++TL ERIR + + + L+ S+G A + D + +I+IAD+ Sbjct: 602 PETSKDKTLDVIERIRMTFQLNTMGIVSSRP-YLTASMGIASYPEDSDNIDEIIKIADDR 660 Query: 442 LYIAKRRGRNRVE 454 LY+AKR G+NRV Sbjct: 661 LYVAKREGKNRVV 673 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 3/199 (1%) Query: 258 NLNNRSLRVKFLLQIRNTVSQIIT--LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKR 315 +L++ +L V L + V++ + L R + D LT L NRR+L R Sbjct: 379 HLSSPNLAVLERLNLVEVVAEQLAMALHNLHLRHRLRTQSIRDPLTGLYNRRYLEESLLR 438 Query: 316 EIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGG 375 E++ R PL+++++D+D FK +ND +GH GD +L Q VR D RYGG Sbjct: 439 ELSRCARRDLPLALMMLDLDHFKALNDRFGHAGGDALLAAFGQLLGGLVRPEDIACRYGG 498 Query: 376 DEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERL 434 +EF ++L A+ + R AE+IR+ VE+ +++ ++++SIG A + H E L Sbjct: 499 EEFTVILPGAAADVAQRRAEQIRAAVEQMQVQHHGQMLPSITVSIGVAAYPEHGSTGEEL 558 Query: 435 IQIADEALYIAKRRGRNRV 453 ++ AD ALY KR GRNRV Sbjct: 559 LRCADAALYCGKRSGRNRV 577 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 15/238 (6%) Query: 229 FSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE 288 + E H L++ F + RV+ L+++ T ++ Sbjct: 87 LTASEEKEH---LLEAFKQGAVDYITKPFYAPELLARVRVHLELKYTKDELNKK-----S 138 Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 + D LT + NRR L +I + E A S++++D+D FK++NDT+GH Sbjct: 139 AAFEKQAITDPLTGIFNRRHLMSISEIEYQKAVNYNRLFSIIMLDIDHFKKVNDTYGHIV 198 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD++L++++Q + +R D R+GG+EF I+L A L+ AER+R + + Sbjct: 199 GDQVLKRMTQEVQNLLREGDVCGRFGGEEFAIILPGADLKIALKIAERLRQAIADFYIPI 258 Query: 409 ANGE-----DIALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVE-LWKAS 459 + I +++S+G ++ D +++ + AD+ALY AK +GRN+V +++ Sbjct: 259 YDSNSSSNLKIKITISLGVTTYHIDDDKLDKMWRRADDALYQAKAKGRNQVCSIYEPG 316 >UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Chloroflexus RepID=B8GC13_CHLAD Length = 728 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 1/175 (0%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + L R + +D LT L NRR+L T RE+ A R PL+V +ID+D FK+ Sbjct: 538 LALSNLALRATLREQAIIDPLTGLYNRRYLETSLSRELHRAQREQIPLTVAMIDIDHFKQ 597 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 ND +GH+ GD +LR+++ F +++R SD R+GG+EF+++L ++ + +R Sbjct: 598 FNDQYGHDAGDTLLRELAVIFREHLRQSDLACRFGGEEFVLILPGVNQATAQTRLQHLRE 657 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRV 453 V++ ++ A +++SIG + L+Q AD ALY AKR GRNRV Sbjct: 658 VVQQRQIIFAGAPLRPITISIGYFTCEKEEIEPHILLQRADAALYAAKRSGRNRV 712 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 107/189 (56%), Gaps = 7/189 (3%) Query: 268 FLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 + + N ++ + + + E++S+ D LT + NR +L F++E+ R Sbjct: 281 YRYLLVNQHNRELQRVNKKLEQLSQ----RDHLTGIHNRYYLDQAFQQELTRYKRYQHGF 336 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 +++++D+D FK+IND++GH GD+++++++ ++VR D V R+GG+EF+I+ E S Sbjct: 337 TIVMLDIDLFKQINDSYGHVVGDDVIKQIAMLLREHVRDQDVVARWGGEEFLILNPETSL 396 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKR 447 + AE +R + +T + I +++S G + D E +IQ AD ALY AK+ Sbjct: 397 DGARTLAEHLRRLIRRTPFTV---DKIDVTVSFGVTDYRAGEDIETMIQRADSALYQAKQ 453 Query: 448 RGRNRVELW 456 GR++ ++ Sbjct: 454 SGRDKTVVF 462 >UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvestris BL2 RepID=B8EJQ5_METSB Length = 738 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 7/175 (4%) Query: 284 RELFEEVSRH---EVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 R +E++R + D LT L NR EI ANR PLS+++ D+D FK I Sbjct: 551 RLKLQELARSLEFQASTDPLTGLFNRMKFDQALAAEILRANRYNRPLSLVLFDIDHFKNI 610 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 ND GH GD +L ++S+ ++R +D + R+GG+EF+I++ E++ +TAE +R+ Sbjct: 611 NDLHGHQVGDNVLVQLSRIAAAHIRGTDVLARWGGEEFVILVPESNGQMAYQTAENLRNA 670 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + + + A A++ S G A + E LI AD A+Y AK +GRN+ EL Sbjct: 671 IGQAVFEKAG----AVTCSFGVAEYVDGDAAESLISRADAAMYRAKIKGRNQAEL 721 >UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G283_HERAR Length = 475 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 80/238 (33%), Positives = 117/238 (49%), Gaps = 18/238 (7%) Query: 220 WFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 W G + IA + ++ Q+F+ +F+ + T ++ K L+ I N Sbjct: 246 WL---GMDACTTIAMLENMREKTQEFEALFDMCVLQTDQVDALLQEAKELITIAN----- 297 Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + REL E+ R DVLT NRR+ FK E A A+R G PLSV +D+D FK+ Sbjct: 298 LGRQRELEEKTHR-----DVLTGAHNRRYFDEAFKHEFAVASRQGWPLSVAFLDIDHFKQ 352 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 +NDT+GH GD+ L +S+ +R SD RYGG+EF+++ E L RIR Sbjct: 353 VNDTYGHAAGDKALIALSRIIATQIRGSDIFVRYGGEEFVLLFPGTVAEEALIVLNRIRQ 412 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNG----HPDYERLIQIADEALYIAKRRGRNRV 453 V + L++S G A H E L++ AD ALY AK+ GRN++ Sbjct: 413 AVASYC-HTYDTATFHLTISAGLAFHMDEDMKHETAEGLLRTADNALYTAKQNGRNQI 469 >UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS30_DESMR Length = 498 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 95/168 (56%), Gaps = 3/168 (1%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 + D LT++ NRR E+ R +S+L++D+D FK IND +GH Sbjct: 313 NQVKIRADHDGLTRIHNRRAFDERLIDELRRHQRYRHAMSLLMVDIDHFKGINDRYGHLV 372 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD +LR+V + +RS+D+ RYGG+EF+++L + +E + AER+R + + + Sbjct: 373 GDHVLREVGSILSETLRSTDFTARYGGEEFVVILPQTAEEQARILAERLRGAIAEARFVH 432 Query: 409 ANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVE 454 +GED ++++SIG + + L++ AD+ALY AK GRN+V Sbjct: 433 -DGEDFSITVSIGVSALQPGALTRRKDLLEKADKALYQAKHLGRNQVC 479 >UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1MYJ5_9GAMM Length = 642 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 29/295 (9%) Query: 192 WEIDIIYKILLDSDLGSSLPLS-QADFGLWFNHKGRHYFSGIAEVGHI------------ 238 W + +I +LL + + LP++ +++GL F +A + Sbjct: 350 WAVFLIGALLLALNKFAFLPITLASEYGLQIGAGLEIMFLSLALADRMANTQREKISAQA 409 Query: 239 ------SRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL--FEEV 290 ++ Q+ + ++ M N + + ++ + + ++ L EL E Sbjct: 410 RSLDLAHQVTQEREKLYRAEMENLKIAREHNEVLE--KTVDDRTKELSEALEELSNAHEK 467 Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 ++ D LTK+ NR F ++ E A+R ++++I+D+D FK++ND +GH GD Sbjct: 468 LKNISVTDALTKIHNRYFFDQHWRSEFKRAHRHKMSIALIILDIDHFKKVNDNFGHPAGD 527 Query: 351 EILRKVSQAFY-DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 L+KV+Q+ R SD V R GG+EF ++L E AE+IR +EK + + Sbjct: 528 LCLQKVAQSIRIQANRESDLVCRLGGEEFAVILPGTDEMGAYEVAEKIRHTIEKRHI-SW 586 Query: 410 NGEDIALSLSIGAAMFNGHPDYER----LIQIADEALYIAKRRGRNRVELWKASL 460 G+ I +++SIG + E+ + AD+ALY AK GRNR ++++++ Sbjct: 587 EGKTIKITVSIGISAMTPRKSDEKMRNIMFNQADQALYQAKGNGRNRTVIFESNV 641 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 6/238 (2%) Query: 221 FNHKGRHYFSGIAEVGHISRL-IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 ++ ++G I+ + +Q+ +F + N S L ++ N Q+ Sbjct: 305 MGNRKTAALIKHPQLGSIAVVPLQNRRDVFGYLVIVAPKGQNYS--HSQLRRLENISGQV 362 Query: 280 -ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 + + + D LT L NRR+ E + R +++++D+D FK Sbjct: 363 ALAVYNGYLYLRLKELAQKDELTGLYNRRYFLERLNEEHLRSRRHKLNYTIVLLDIDYFK 422 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 +INDT+GH+ GD +L + D +R +D RYGG+EF+++L + + E AER+R Sbjct: 423 KINDTYGHDCGDLVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQTGKKEAYLLAERLR 482 Query: 399 SRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVEL 455 +V K ++ G+ + ++S+G A + +Y L+ +AD+ALY AK RGR++V + Sbjct: 483 EKV-KERVLIFQGQKVKYTVSMGLAAYPEDAEEYRELLSLADKALYQAKNRGRDKVVM 539 >UniRef50_C1DVZ5 Ggdef domain protein n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DVZ5_SULAA Length = 826 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 73/188 (38%), Positives = 114/188 (60%), Gaps = 3/188 (1%) Query: 265 RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 +V+F+ + N S + L + E+++ D LT L NRR++ F +EI A R Sbjct: 637 KVEFIESLINAFSPFASTLNLI--EINKELSLKDSLTNLYNRRYIIEFFTKEIGKAKRLD 694 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 + VL+IDVD FK++NDT+GH GD L+KVS F ++VR D V R+GG+EFI++L Sbjct: 695 YNIGVLVIDVDNFKKLNDTYGHLVGDLCLKKVSNVFLNSVREMDIVGRWGGEEFIVILPG 754 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALY 443 + E T + AERIR +V + + + + +++SIG A++ D + LI++ADE LY Sbjct: 755 SDEESTYQIAERIRKKVSSEVIFTPDNKILNITVSIGMAVYPKDGDNLDDLIKVADEKLY 814 Query: 444 IAKRRGRN 451 AK+ G+N Sbjct: 815 QAKKSGKN 822 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 60/178 (33%), Positives = 100/178 (56%), Gaps = 7/178 (3%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 + E+ R D LTKL+NRR + + E+ A R G LS+L++DVD FK+ NDT Sbjct: 387 EKRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNLSILLLDVDHFKKFNDT 446 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GD +L ++ R+ DY RYGG+EF ++L + ++ A+R+R RV + Sbjct: 447 YGHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDADGAIKVADRLRERVAE 506 Query: 404 TKLKAANGEDIALSLSIGAAMFNG--HPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 ++ + + +++SIG A + + +++ AD ALY+AK +GRN+V + Sbjct: 507 KEV-----DGLRVTISIGVASYPDLSITRPDAMVRAADSALYVAKEQGRNKVVYASEA 559 >UniRef50_C0N947 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N947_9GAMM Length = 713 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 102/189 (53%), Gaps = 2/189 (1%) Query: 272 IRNTVSQI-ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 IR ++ +TL E + D LT L NRRF R+I A R T LS+L Sbjct: 517 IRRASQRLAVTLGNIKLREDLQRYSFEDSLTGLRNRRFFDDALSRDIQLAEREQTALSLL 576 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENET 390 I D+D FK ND +GH GD L+ V+ R SD R GG+EF++++ EAS ++ Sbjct: 577 ICDIDHFKRFNDEYGHEAGDVALQSVAAKLKQQFRQSDIPCRLGGEEFVVLMREASLDDA 636 Query: 391 LRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRG 449 AE++ + + + N + L++S G A + G PD E L++ AD+ALY AK+ G Sbjct: 637 RVKAEKLLEAIAENHIDYDNEKLGPLTVSAGVASWRGDEPDAEALLRKADKALYKAKQTG 696 Query: 450 RNRVELWKA 458 RN V +++A Sbjct: 697 RNCVVVFEA 705 >UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8W9_ALHEH Length = 302 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 4/180 (2%) Query: 276 VSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335 VS I +R+ E H+ D LT L+NR + REI R G +++++D+D Sbjct: 126 VSAIDLSVRKALEAQLHHQANHDPLTGLVNRYHFEELLAREIERGQRYGGGFALIMLDID 185 Query: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAE 395 FK +NDT+GH GD++LR+ ++ +R++D + R+GG+EF+++L AE Sbjct: 186 HFKAVNDTYGHLEGDKVLRRFAEELTGKIRAADTLARWGGEEFMLLLPGTDIAGARALAE 245 Query: 396 RIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 IR V ++ +++S+G + L++ DEALY AK GR++V + Sbjct: 246 AIRVAVNGCRMPVPG----QVTVSLGVTGYRNGESVWGLLKRVDEALYAAKLAGRDQVVV 301 >UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BK03_TERTT Length = 580 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 8/239 (3%) Query: 223 HKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNL------NNRSLRVKFLLQIRNTV 276 K + E+ + + + + + ++ + + N S +++ LL ++ Sbjct: 337 EKIHASLAASTEIQSLKQAVTNHLDVIHKALAEFHSGHLRAENANLSDQLQALLAKVESI 396 Query: 277 SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 + +EL EE R+ D LT L NR +E R PL + + D+D Sbjct: 397 ESESSKTKELLEE-ERYRATHDSLTGLPNREAYNERVYQEYRRFTRYSRPLGIAVCDIDH 455 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK+IND +GH TGD +L+ +++ +R D+V RYGG+EF+I+L E S +++ ++ Sbjct: 456 FKKINDNFGHQTGDRVLKLIARLISTRLRKVDFVARYGGEEFVILLPETSASQSRSVLDK 515 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 IR+ V K + + + + ++LS G + F E Q AD+ALY AK GRNR + Sbjct: 516 IRAAVAKAAFRFGD-DPVKITLSFGISAFRSDDTIETAFQRADKALYQAKADGRNRCVV 573 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 120/241 (49%), Gaps = 9/241 (3%) Query: 224 KGRHYFSGIAEVGHISRLI---QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQII 280 GR G++++ +I ++ D GI + + L L + L + + + Sbjct: 261 DGRERIFGLSKLENIPLILMVGYDLAGILTEWSKRAGQLAAGFLLLVALATL--GLRSYL 318 Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 T +R+ E R + D LT + NRR L ++ + E+A R G L++ ++D+D FK I Sbjct: 319 TTVRQREE--LRRQADTDPLTGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAI 376 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 NDTWGH TGD +++ ++ A + R D R GG+EF VL E AER+R Sbjct: 377 NDTWGHPTGDRVIQVLAAAMAASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLREA 436 Query: 401 VEKTKLKAAN-GEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 VE + G+ + ++SIG A G E ++ AD ALY AK GRNRVE+ Sbjct: 437 VEAITSALDDQGQPVRFTVSIGVAAIQLGDGSVEDILGRADRALYAAKHGGRNRVEMAAT 496 Query: 459 S 459 + Sbjct: 497 A 497 >UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH70_DESMR Length = 570 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 103/437 (23%), Positives = 179/437 (40%), Gaps = 46/437 (10%) Query: 45 IVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIP 104 I+ DP + RQL +++ W + + ++ Q+ ++ Sbjct: 151 ILVADPETGLDVQMNAAVRQLGVSLKGWDELAFAVREI---SVLIQQYQLSR-------- 199 Query: 105 VEIVEMGFRVLKKILYPVIFSSD-YSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSAS 163 V + L +I ++ A K + +A +M A + S ++ Sbjct: 200 QRPVMQTAVNKVEALRRLIAATPGLETARKTEALRLCDTFDKVAARLMDTAVSMSANAND 259 Query: 164 KEDENYRIFSLLENA----EEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGL 219 + + + E+ E ER I W ++ L S+L F Sbjct: 260 FALQARAVDPIAEDLRRITAVEVERAKGRI-GWAT----RLAGGIVLFSALLGLGCIF-- 312 Query: 220 W---FNHKGRHYFSGIAEVGHISRLIQD--FDGIFNQTMRN-----TRNLNNRSLRVKFL 269 W H+ + I E+ + ++D F G + + R L + + R+ L Sbjct: 313 WVARLLHRAVT--NRIVELTRYAGNVRDGHFGGAIDMAGSDEIGLLARALADMNGRIHDL 370 Query: 270 L-----QIRNTVSQIITLLREL--FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 + ++R ++ REL + D LT L NRR L + E A+R Sbjct: 371 VGGLEDKVRQRTLELDAKNRELDAKNQALAVLSLTDRLTGLCNRRRLDQVLSGEWRRAHR 430 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 GTP SV++ID+D FK++NDT+GH GD +L +V+ VR +D V R+GG+EF++V Sbjct: 431 YGTPFSVIMIDLDNFKDVNDTFGHAVGDAVLLRVADILLAVVRETDVVGRFGGEEFLLVC 490 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 E + + AE +R ++ T ++ S G A + P L+ AD+AL Sbjct: 491 PETTVEDARVLAEALRRELQDTDFPIVG----RITASFGLADYEADPGPAALVARADKAL 546 Query: 443 YIAKRRGRNRVELWKAS 459 Y AK+ GRN+V + + Sbjct: 547 YRAKQSGRNQVIVAPTT 563 >UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZM9_9PROT Length = 379 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 9/218 (4%) Query: 243 QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTK 302 + G N S F+ ++ N S I L L E + D LT Sbjct: 141 DELIGSLNMASSTAERFTADS-STDFIERLANIFS--ICLENSLNHERLKLVGLTDPLTG 197 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 + NRR+L T + E AH R +PLS + +D+DKFK IND++GHN GD+IL V+ Sbjct: 198 IYNRRYLETRCQEEAAHVRRYRSPLSCMFLDIDKFKRINDSFGHNIGDKILCSVTAQIKS 257 Query: 363 NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 +RS+D + RYGG+EF+++L + AERIR V + + +++ +++SIG Sbjct: 258 QLRSNDVLARYGGEEFVVLLPQTGIRGACDIAERIRRTVAEQAFQIGREDELKVTISIGV 317 Query: 423 AMFNGHPDYER------LIQIADEALYIAKRRGRNRVE 454 A D + L+ ADEALY+AK GRN+V Sbjct: 318 AQAPVDADGDERTVAHQLLAAADEALYLAKESGRNKVV 355 >UniRef50_Q30QH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QH0_SULDN Length = 615 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 3/221 (1%) Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 + D + T N ++ + + +I ++ E R D + Sbjct: 390 INHDISLTVSMTSGNRDEVDLMKKNISSIRHYLEAAKPVIE--SQILMEKLRDTSLRDGM 447 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 T L NRRFL I + ++ ANR +VL++DVD FK +NDT+GH+ GD+++ +S+ Sbjct: 448 TGLYNRRFLEEIIDKIMSQANRNKETYAVLMLDVDFFKMVNDTYGHDVGDKVIVALSKIL 507 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 +++R SD RYGG+EF+I+L+ A++ ++ A +I S E + ++SI Sbjct: 508 KNSIRESDLAIRYGGEEFLILLSNATDEGIMQVANKIHSNFAALSFDVGTSETLKKTISI 567 Query: 421 GAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVELWKASL 460 G + F D + I+ AD ALY AK GRN++ +K + Sbjct: 568 GISKFPTDGDTIWKCIKYADTALYEAKNTGRNKIVEFKKDM 608 >UniRef50_C1DCC5 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCC5_LARHH Length = 601 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 125/238 (52%), Gaps = 4/238 (1%) Query: 226 RHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQ-IRNTVSQIITLLR 284 R FS E ++ + GI + M++TR ++ LQ R+ V + + Sbjct: 365 RERFSRYGEEVALTHDVVGLHGILGRLMQDTRAIHTDLASAHDELQGARHQVEAVNARIE 424 Query: 285 ELFEEVSRHEVGM--DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 L E+ + D LT LNRR L F RE + A R+G PL++ +ID+D FK++ND Sbjct: 425 LLEAELVEASTKIKEDQLTGALNRRGLDEQFMREASRAERSGQPLALALIDIDNFKQLND 484 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH TGD LR V + VR SD V R+GG+EF++++ + S+ + L ER++ + Sbjct: 485 RYGHRTGDNALRYVVDLVSERVRPSDAVARFGGEEFVVLMPDTSQEQALELIERLQRDLT 544 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 KT AN + + ++ S G A+++ LI+ AD A+Y AK G+NRV + Sbjct: 545 KT-FFLANEDRLVITFSAGIAVWSAGESELDLIERADHAMYRAKLAGKNRVLAATDEM 601 >UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A1WD95_ACISJ Length = 382 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 104/189 (55%), Gaps = 2/189 (1%) Query: 271 QIRNTVSQIITLLRELFE--EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLS 328 ++ + +++ + REL E R D LT L NRR++ + + E A A R+ PL Sbjct: 194 RVHSARARLRSQQRELAAAVEQIRELAVRDELTGLPNRRYMLEMMRLEHARAQRSRQPLL 253 Query: 329 VLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASEN 388 + +D+D FK +NDT GH GD L+ +Q + VR+SD + R+GG+EF++++ Sbjct: 254 LAQLDLDHFKAVNDTHGHAAGDVALQSFAQTVHGCVRASDLLARWGGEEFLLLMANTHPA 313 Query: 389 ETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRR 448 + R ER+R+ V T + G ++L++S+G A L+Q AD ALY AKR Sbjct: 314 DGTRLLERVRATVAATPVALPGGTQLSLTVSVGLAELAHGESTAALLQRADAALYGAKRL 373 Query: 449 GRNRVELWK 457 GRNRV L Sbjct: 374 GRNRVLLAH 382 >UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2K3_9DELT Length = 499 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 3/165 (1%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 + D LT++ NRR E+ R P+S+L++D+D FK INDT+GH GD Sbjct: 316 KVRADHDGLTRIHNRRAFDERLVEELRRHQRYHHPMSLLMLDIDHFKGINDTYGHLVGDH 375 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +LR+V + + +RS+D+ RYGG+EF+I+L + +E ++ AER+R + + +G Sbjct: 376 VLREVGRLMTETLRSTDFTARYGGEEFVIILPQTAEEQSRVLAERLRGLIADARFVH-DG 434 Query: 412 EDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVE 454 ++++SIGAA + L+ AD+ALY AK GRN+V Sbjct: 435 HPFSITVSIGAATLLPGALSKRKDLLDKADKALYQAKTLGRNQVC 479 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 6/234 (2%) Query: 229 FSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE 288 F + + +L G+ N + + +NL + +L ++ + E+ E Sbjct: 476 FKSKSLICLPLKLKYKIIGVIN--LSDKKNLTPFTEADLRVLTSFANLASLTIERTEVLE 533 Query: 289 EVSR--HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 E R D LT L NRRFL + + E+ + R G L+V+ ID+D FK ND GH Sbjct: 534 ESERFEQLSVTDALTGLYNRRFLKSRLEEELNRSIRQGLNLTVIFIDLDFFKNFNDLCGH 593 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 GDE L+ + ++R D V RYGG+EF VL S+ E + AERIRS +EK K Sbjct: 594 LAGDEALKITADIIKASLREMDIVARYGGEEFCAVLPGTSKAEAMIVAERIRSEIEKEKF 653 Query: 407 KAA-NGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKA 458 + + L+ S+G A F + L+ +D ALY AK GRNR+ + Sbjct: 654 PGEKDIPQMRLTASLGIASFPEDGRTFTTLVHSSDVALYEAKASGRNRIVAART 707 >UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYG3_9DEIN Length = 354 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 4/166 (2%) Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 + D LT+L NRR L + K+E+ A R G P +VL+ D+D FKE+ND GH G Sbjct: 184 IMEQLAHTDHLTRLTNRRGLEPLLKQELQRAERYGLPFAVLLADLDHFKEVNDRHGHAIG 243 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D++LR+V+ N+R +D V R+GG+EF+I+ + + AER+ + + Sbjct: 244 DQVLREVAPRLDHNLRQADTVARWGGEEFLILAPTTDLAQAGQLAERLIEVIRSEPVVG- 302 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 I +++SIG + + E L+Q ADEALY AK GRNR+EL Sbjct: 303 ---SIPVTISIGVSCYRAGDSLESLLQRADEALYRAKALGRNRLEL 345 >UniRef50_C6MLU9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. M18 RepID=C6MLU9_9DELT Length = 465 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 10/180 (5%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 I + E ++ D LT L NRRFL ++ A R G SV+++D+D FK Sbjct: 292 IAVNNSRLYEETKSVSLHDPLTGLANRRFLDIQLEKVFELARRHGENQSVIMLDIDHFKI 351 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 NDT+GH GD++L +++ +R SD+VFRYGG+EF+ +L + AER+R+ Sbjct: 352 YNDTYGHQGGDQLLVRLAGILKAQMRKSDFVFRYGGEEFLALLPDTDLPMACDAAERVRA 411 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWKA 458 VE+ +++S+G A + PD E L++ AD ALY AK RGRNRVE + Sbjct: 412 AVEREA---------GVTISLGVAAYRDGMPDKEALVRAADAALYRAKERGRNRVETAEG 462 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 114/245 (46%), Gaps = 8/245 (3%) Query: 214 QADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIR 273 F L + +V LI + + R S+R + Q+ Sbjct: 367 SCAFSLGYAVMKLFILQRDEQVTTQQTLIAK--SAAQDALLHERLSLQESVRQELETQVD 424 Query: 274 NTVSQIITLLRELFEE--VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 ++ LREL E+ D LT + NRRF E+ + R TPLSV++ Sbjct: 425 ERTFELQVTLRELEEKNRELEQLNMEDPLTGIKNRRFFDKKLVMELRRSRREQTPLSVIM 484 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENET 390 +D+DKFK INDT+GH TGD+++R + + R D V RYGG+EF+++L + Sbjct: 485 LDIDKFKVINDTYGHLTGDQVIRTAADTIKKQLQRPLDEVARYGGEEFVVLLPNTQNDGA 544 Query: 391 LRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRR 448 + AE+IR + + A G I+ ++S G + E + AD+ALY AK+ Sbjct: 545 IAIAEKIRHAIATNNVHVA-GTTISFTISAGVYTSVAEDINNPEIFTERADKALYFAKQH 603 Query: 449 GRNRV 453 GRN+V Sbjct: 604 GRNQV 608 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 4/182 (2%) Query: 276 VSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335 ++Q I+ + L EE+ R D LT L NRR R + A R GTPLS++++D+D Sbjct: 178 MTQDISARKALEEELLRLAAS-DPLTGLANRRGFFEGAARMLGMARRCGTPLSMIMLDID 236 Query: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAE 395 FK +ND +GH+ GD +LR V+ +++R SD R GG+EF ++ + AE Sbjct: 237 HFKAVNDAYGHDAGDAVLRAVAGRLRESLRVSDLAGRVGGEEFAVLCPGTDLAGGVELAE 296 Query: 396 RIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD--YERLIQIADEALYIAKRRGRNRV 453 R+R +E + A+ + ++ S G A D + AD ALY AKR GRNRV Sbjct: 297 RLRLALEDMVV-TADCRAVKVTASFGVAQCRDDRDAAPSACLTRADRALYAAKRGGRNRV 355 Query: 454 EL 455 L Sbjct: 356 CL 357 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 5/220 (2%) Query: 235 VGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHE 294 +G+ + F+ I + L K++ ++ V + L+ E + Sbjct: 146 LGYGEEDKKVFETIARMIAAKLALIEQTELVKKYMAELEAKVEERTLELKR-ANEKLEYL 204 Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 D LT+L+NRR L + ++E +R LS++++D+D FK +NDT GH GDE++ Sbjct: 205 ASTDPLTELVNRRRLDEVLEQEFERTSRYQGELSLILLDIDHFKAVNDTRGHQVGDEVIA 264 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 V R SD R+GG+EF+IV + S + + AE++R +E T+ + + Sbjct: 265 GVGNIAKQMSRKSDTAGRWGGEEFLIVAPQTSCDNAVAFAEKLRLSIENTEFSSG----V 320 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +S S G A + +++ ADEALY AK GRNRVE Sbjct: 321 RVSASFGVASLETGETIQLVLKRADEALYRAKHNGRNRVE 360 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 6/217 (2%) Query: 238 ISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGM 297 I + G R R+ + L L R T I L R+ E+ Sbjct: 163 IFSSDRQLLGTLATYYREPRSPSQEELA----LAQRITRIIAIALQRDGHEKQLYRLATQ 218 Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT+L NRR + REI + R G+ +SVL++D+D FK+IND +GH GDE++R S Sbjct: 219 DGLTELNNRRQFIELADREIERSRRHGSRMSVLMMDLDHFKDINDHYGHAVGDEVIRHFS 278 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 Q + +R+SD R GG+EF VL + ++ + AER+RS +L A +G + + Sbjct: 279 QVCREVLRASDLCGRLGGEEFAAVLPDTGLDDARQVAERLRSLASSARLSAVSG-SLGYT 337 Query: 418 LSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRV 453 +SIG A + D + ++ AD+ LY AKR GRNRV Sbjct: 338 VSIGVAERHADETDIDEVLGRADKQLYQAKRDGRNRV 374 >UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodopseudomonas palustris RepID=Q216C5_RHOPB Length = 735 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 67/186 (36%), Positives = 94/186 (50%), Gaps = 7/186 (3%) Query: 278 QIITLLRELFEEVSR---HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 I T R +E++R + D LT + NRR E+ NR TP S L+ D+ Sbjct: 544 SIHTEKRIELQELARGLQVQATTDPLTGMFNRRVFNEGLAAELVRFNRQQTPFSSLLCDI 603 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FKEIND GH GD++L +S+ +VR +D++ R+GG+EF I+L A + + A Sbjct: 604 DHFKEINDVHGHLMGDQVLVHLSRILSRSVRQTDFLARWGGEEFGILLVGADQTAAVEFA 663 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 E++R+ + T L+ S G A E L+ D ALY AK GRNRVE Sbjct: 664 EKLRTTIAYTVFDDVGN----LTCSFGVAECVLGDTPESLLARVDNALYRAKMNGRNRVE 719 Query: 455 LWKASL 460 L L Sbjct: 720 LAPPPL 725 >UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Ralstonia pickettii RepID=B2UI26_RALPJ Length = 348 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 6/202 (2%) Query: 255 NTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFK 314 LN+ + V+ + R ++L EL +++RHE D + + NRR + Sbjct: 143 ERELLNDLASWVESGFRERELSETQRSILTEL--QIARHESLTDPMLGIWNRRAAMELLT 200 Query: 315 REIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYG 374 RE HA R G PLS+L++DVD FK +NDT+GH GD +L ++++ N R D V RYG Sbjct: 201 RECGHAMRYGQPLSLLVVDVDHFKRVNDTYGHPVGDAVLVEIARTLRVNSRPIDAVGRYG 260 Query: 375 GDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP---DY 431 G+EF++VL + + + AER+RS VE ++ +I S+S+G A Sbjct: 261 GEEFLVVLPDTTTLQASDIAERLRSAVESLEIATPE-ANIRSSISVGLASCEPEKNLCTP 319 Query: 432 ERLIQIADEALYIAKRRGRNRV 453 LI AD AL AKR GRNRV Sbjct: 320 TDLIMRADAALLAAKRLGRNRV 341 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 3/208 (1%) Query: 246 DGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLN 305 D I + +R V ++++ + L +L+E++ R D LT L N Sbjct: 485 DRILGTLVAGSRKKAAFEQDVLRMIEVIAIQAAQAVLRAQLYEQMER-MATTDGLTGLYN 543 Query: 306 RRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVR 365 R +A + R S+++ DVD FK +NDT+GH TGD++L+ V++ R Sbjct: 544 HRTFQAKADEVLAQSRRYQRKFSLILTDVDHFKSVNDTYGHPTGDQVLKGVARIIKTMAR 603 Query: 366 SSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF 425 +D V RYGG+EF+I++ E +ERIR V+ + G + +++S+G A F Sbjct: 604 DTDIVARYGGEEFVIIMPETDAKGAFTISERIREAVKAEVFQTEMG-PLRITMSLGIATF 662 Query: 426 NGHP-DYERLIQIADEALYIAKRRGRNR 452 + ++LI +AD+ LY +KR GRN+ Sbjct: 663 PDSAMEKQQLIDLADQCLYHSKRNGRNQ 690 >UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TNG7_RICCO Length = 204 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 4/183 (2%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + +++E + R D LTK+ NRR ++E+A A R+G PL+ L++D+D FK+ Sbjct: 12 VLMIKERSDREIRTLAMTDPLTKIFNRRAFMIQAEKELAAAERSGLPLAFLMLDIDHFKQ 71 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 IND +GH GDE+L ++ + ++R D + RYGG+EF +L + AE++R Sbjct: 72 INDKYGHAAGDEVLVRIVEVLSSHLRKQDTLGRYGGEEFCALLPGTDAQGAMALAEKLRL 131 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFN---GHPDYERLIQIADEALYIAKRRGRNRVELW 456 V T+++ + L+LSIG + + DY L++ AD ALY AK GRNR L+ Sbjct: 132 EVAMTRIEVEEN-SLGLTLSIGGSTWEHLGPTKDYRELMEEADRALYQAKTGGRNRSLLY 190 Query: 457 KAS 459 + + Sbjct: 191 RTA 193 >UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5UZW7_ROSS1 Length = 797 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 5/194 (2%) Query: 263 SLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 S R +L+I + I +LF E R D LT L NR + RE+ A R Sbjct: 598 SERDGAMLEIVGRQTGIAITNAQLFTETQR-LATTDQLTGLFNRYHFFALAPRELERARR 656 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 +++LIIDVD FK INDT+GH GD +L+ ++ +R +D + R+GG+EFI +L Sbjct: 657 YRHDVALLIIDVDHFKTINDTYGHVAGDTVLQHIADHMRRELRDADILARFGGEEFIALL 716 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG---HPDYERLIQIAD 439 E + LR A R+R+ +E + NG+ I ++S+G A + + LIQ AD Sbjct: 717 PETNLTGALRVAGRLRATIEANPVPL-NGQSIRATISVGCASLHPATRDEHLDTLIQRAD 775 Query: 440 EALYIAKRRGRNRV 453 ALY AK GRN+V Sbjct: 776 RALYTAKAGGRNQV 789 >UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW7_DESBD Length = 572 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 89/353 (25%), Positives = 144/353 (40%), Gaps = 32/353 (9%) Query: 120 YPVIFSSDYSAAEKLQVYHF--------SINSIDIAMEVMTRAFTFSDS---SASKEDEN 168 Y F + ++ V ++ ++ A ++ T A D SA + E Sbjct: 225 YEAWFDTKWADRRCYAVTYYPYRERDDSISGAVVTATDI-TEAKRMQDEIANSARRLAEA 283 Query: 169 YRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNH----- 223 R+ + EK+ SW + + D DF L+ +H Sbjct: 284 QRLAKVG---SFEKDYLHGK-KSWSDEFCRILGYPPDAVDP------DFNLFMHHIHPDD 333 Query: 224 --KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 R F GH + + + L + ++ ++ + Sbjct: 334 EPAFRENFEAAQATGHEFTTELRIRTVQGEERHVSLVCGFDLLEDGSMFRLHGAMADVTE 393 Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 R L E D LT L NRR + E+ + R G L V ++D+D FK++N Sbjct: 394 --RRLAELRLERLANTDELTGLPNRRHFLECVRAEMTRSRRFGKSLCVAMVDIDDFKKVN 451 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 DT GH GD LR V+Q R+ D V R GG+EF ++ EA + AER+R + Sbjct: 452 DTHGHGVGDLALRHVAQTINGLRRAVDVVGRLGGEEFCVLFPEAGLAAGITAAERVRKAL 511 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + L+ + + L++SIG A ++G + L++ +DEALY AKR G+NRV Sbjct: 512 AEAVLEHGD-LRLRLTVSIGLAEYSGDESLDGLLRRSDEALYEAKRTGKNRVC 563 >UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVY6_CHLT3 Length = 440 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 110/222 (49%), Gaps = 3/222 (1%) Query: 238 ISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGM 297 I + D N + + + + ++ T+ + + E E++ V Sbjct: 216 IKEVRADIPDTLNTMVGELDDFVKKRHHDDEISKLARTLRHLGKEVEEKTNELN-QMVIT 274 Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D TKL N R F E+A A R PLS+++IDVDKFK NDT GH GD++L KVS Sbjct: 275 DEKTKLFNFRHFKQEFLIEVARAKRFNEPLSLIMIDVDKFKHYNDTNGHMLGDQVLIKVS 334 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGED-IAL 416 R +D R+GG+EF +L E + AERIRS +E ++ + + L Sbjct: 335 ALLKKECRETDVPARFGGEEFAALLPRTDAKEAFQVAERIRSSIETSEFENQKAQPGGNL 394 Query: 417 SLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWK 457 + S+G A F D E LI ADEALY AK GRNRVE++ Sbjct: 395 TASLGVATFPFDAYDAEALIIAADEALYRAKENGRNRVEVYS 436 >UniRef50_B8FIY6 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIY6_DESAA Length = 589 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 98/192 (51%) Query: 262 RSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHAN 321 ++ + L R Q + ++ E+ D LT L N+R+ T EI + Sbjct: 395 ETVLLSLALGDRINALQQEKRVLQVQEKRLMELSIRDELTGLFNKRWFSTKISSEIENCR 454 Query: 322 RTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIV 381 PLS++I+D+D FK ND +GH GD +L ++ + NVR D RYGG+EF I+ Sbjct: 455 AVDQPLSLIILDIDHFKRFNDAYGHAMGDTVLNQLGKIISVNVRERDVPCRYGGEEFTII 514 Query: 382 LTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEA 441 L + + AER+R + + +GE I ++S+GAA + D L + AD+A Sbjct: 515 LPLIDLKKAAQIAERLRGIFSRFVFRTGSGEKIKATISLGAAELSPTDDAASLFEKADQA 574 Query: 442 LYIAKRRGRNRV 453 LY AK GR+RV Sbjct: 575 LYRAKNSGRDRV 586 >UniRef50_A1VD57 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgaris RepID=A1VD57_DESVV Length = 487 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 3/177 (1%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + L + + + D LT+L NRR E+ R G P+++L++D+D FK Sbjct: 298 LALRNAVVYREIKLQADHDALTQLHNRRSFDHRLAEEVDRHQRYGMPMTLLMLDIDHFKA 357 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 +NDT+GH GD +LR+V+Q + R++D+ RYGG+EF ++L AER+R Sbjct: 358 VNDTYGHPAGDAVLREVAQTMRNACRTTDFAARYGGEEFCVILPHTDGKCGRIFAERLRK 417 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVE 454 R+ ++++ +G+ IA+++SIG A + ERL+ AD ALY AK GRN V Sbjct: 418 RLASSRVE-VDGKTIAVTVSIGLATLSAAAPLSPERLVCEADGALYAAKAAGRNIVC 473 >UniRef50_Q1NSC4 GGDEF:GAF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NSC4_9DELT Length = 376 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 83/235 (35%), Positives = 124/235 (52%), Gaps = 13/235 (5%) Query: 226 RHYFS--GIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 RH + G+ GHI +Q +G + LR + LL+ + + Sbjct: 152 RHTITPPGMEPHGHIIVPLQSKEGTVGVFYYHLPPDTPLPLRKQSLLKDIGALLGMAITN 211 Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 +EE S E G DVLT L NRR L T +R+ A A R + L+V+++D+D FK+ NDT Sbjct: 212 ARRYEEKS-AEAGQDVLTGLANRRQLNTELERDWATAQREKSSLAVIMLDLDHFKQYNDT 270 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 GH GD +LR++ Q D VR D RYGG+EF+++L A + AER+R V Sbjct: 271 HGHLAGDRLLREMGQIMRDCVRCEDLPVRYGGEEFLVLLRRAGDARAEAVAERLREAVAA 330 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWK 457 +++S+G A N + D +++Q ADEALY AK++GRNRV+++ Sbjct: 331 RT---------EVTVSLGVAGSNQNDHDPWQMVQRADEALYQAKQQGRNRVQVYS 376 >UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7C6_9DELT Length = 297 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 5/223 (2%) Query: 235 VGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT--LLRELFEEVSR 292 V I+D D + + R ++ LR L+++ ++ + ++ + + E Sbjct: 74 VDEFGIKIRDNDSTNGTYINDNR-IHEAYLRDGDLVKVGRSIFKFLSGDNIESSYHEEIF 132 Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 +D LT++ NRR+ +RE++ A R PL++LI D+D FK NDT+GH GD + Sbjct: 133 RLSTVDGLTQVFNRRYFMETLERELSRARRYDRPLALLIFDIDHFKRCNDTYGHRAGDFV 192 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE 412 LR++++ R D V RYGG+EF ++L E AE+IR + G Sbjct: 193 LRRIAELVTMRARKVDVVSRYGGEEFTVILPEIDIRGASAFAEKIRKLIADETF-IFEGR 251 Query: 413 DIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNRVE 454 I +++SIG A + + +IQ AD LY AK GRNRV Sbjct: 252 KIPVTISIGVAEIGPSVANADDMIQTADRRLYAAKTGGRNRVV 294 >UniRef50_Q47HY8 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HY8_DECAR Length = 585 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 85/285 (29%), Positives = 137/285 (48%), Gaps = 12/285 (4%) Query: 173 SLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGI 232 S L+ ++ + AS+ I + + D + + +D+ Sbjct: 308 SRLKEVLFKQAQLKASLSEARDAIKHMLAGFVDHLADFADATSDY--------HDKIESC 359 Query: 233 AEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVK-FLLQIRNTVSQIITLLRELFEEV- 290 AE S+ I + + + + MR TR + + R + L + V + ++EL E+ Sbjct: 360 AEKISSSKDITELEDVLGEVMRETRTIQINAQRSRDELRSTQQKVQESEARIQELERELV 419 Query: 291 -SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 S V D LT LNRR L IF +E A A R T L V +ID+D FK++ND+ GH+TG Sbjct: 420 ASSDLVRHDQLTGTLNRRGLEEIFTKEAARATRHDTALCVALIDIDNFKKLNDSMGHDTG 479 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D+ L ++ + +R D V RYGG+EFII+L E S ++ R++ + K K Sbjct: 480 DQALIHLATICRETLRPQDTVARYGGEEFIILLPETSLDDAAIALTRLQRELTK-KFFLH 538 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 E + ++ S G + +I+ ADEA+Y AK+ G+NRV Sbjct: 539 GNEKVLITFSAGVTQMLPNDTQATVIKRADEAMYQAKKTGKNRVT 583 >UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSI3_ACIC1 Length = 517 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 9/215 (4%) Query: 243 QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTK 302 + DG+ N R + RV +L+ + + + L E+++ D+LT Sbjct: 297 NNVDGVL-VAEHNARFGSRVDRRVVAMLERYASQTALALANSWLLEQIT-LLAATDMLTG 354 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 + NRR L R A A+R P+SV+++D+D FK INDT+GH GD+ L++V++A Sbjct: 355 VANRRTLEENLDRMFAQASRAAQPISVVMVDIDHFKHINDTFGHQVGDQTLQRVARALQQ 414 Query: 363 NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 RSSD V RYGG+EF++VL + AE +R R+ + +++S+G Sbjct: 415 GCRSSDLVARYGGEEFVVVLPDTDLAGAATAAENLRRRIFGLD------AEPRVTVSLGV 468 Query: 423 AMFNGH-PDYERLIQIADEALYIAKRRGRNRVELW 456 A F H + ++ AD ALY +K GRNRV L Sbjct: 469 ATFPLHGGSPDHILSAADAALYQSKSAGRNRVTLA 503 >UniRef50_B9QXQ9 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXQ9_9RHOB Length = 398 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 109/203 (53%), Gaps = 13/203 (6%) Query: 262 RSLRVKFLLQIRNTVSQIIT---LLRELFE---------EVSRHEVGMDVLTKLLNRRFL 309 R L LQI VS +I L ++L+E + + + D LT +LNR + Sbjct: 190 RDLHHDIFLQIAGQVSVLIEKSLLYQQLYELNGQLMEAHQKLKDQAMHDALTGVLNRGAI 249 Query: 310 PTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDY 369 + + E+ A RT PL V++ D+D FK IND +GH GDE+LR V+ D +R D+ Sbjct: 250 FNLLESELCKAARTQAPLVVIMADLDHFKSINDRFGHLAGDEVLRTVAATIKDTLRGYDH 309 Query: 370 VFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP 429 V RYGG+EF+I+L+ N + AERIR V ++ +G I ++S G A+ + Sbjct: 310 VGRYGGEEFLILLSGTDTNMAVDVAERIRGTVANLEIMHKDG-PIRPTISQGLALSDPSG 368 Query: 430 DYERLIQIADEALYIAKRRGRNR 452 E++I AD ALY AK GRN Sbjct: 369 TAEQVIARADAALYKAKEDGRNC 391 >UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8Q2_9ALTE Length = 379 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L + + D LT LLNR + ++ +A R G P S+++ D+DKFK +ND++G Sbjct: 196 LSRQQLKSLASTDQLTGLLNRHAIHKSLEQLVARHARHGHPFSLILGDLDKFKRVNDSYG 255 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 HN GDE+L + + D+VR+ D + R+GG+E ++VL + + L AE++R + + Sbjct: 256 HNVGDEVLIETANRLQDHVRAGDILCRWGGEELLVVLPDTERDSALAVAEKLRCAIGEAP 315 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + A G I ++S G ++ + I AD ALY+AK+ GRNRV Sbjct: 316 M-TAGGHSIEQTISFGVTCYHNGEHIDTTIMRADSALYLAKQGGRNRVV 363 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 8/239 (3%) Query: 223 HKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITL 282 + R + I E GH F+ + ++T N+ + R++F + S Sbjct: 582 ERVRPRLTEILETGH-----ASFESV-HRTAMGPVNVEVHARRIEFEGRFVVLSSARDIT 635 Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ E E D LT + NRR RE A A R + L+VL++D+D FK +ND Sbjct: 636 ERKNLEAALLREATTDPLTGVRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFKNVND 695 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH GDE+LR + + +R+ D R GG+EF +L AS E + TAER+R RVE Sbjct: 696 LYGHQAGDEVLRAFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLRKRVE 755 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKASL 460 + + G + ++S+G ++ +++ AD ALY AK GRNR E+ + Sbjct: 756 RRSV-VYEGTALQCTVSVGVTSLAAADLGFDDMLRRADRALYAAKDHGRNRSEMAPMPM 813 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteria... 544 e-153 UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteria... 539 e-151 UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID... 515 e-144 UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 485 e-135 UniRef50_C1DFY2 GGDEF domain protein n=4 Tax=Gammaproteobacteria... 478 e-133 UniRef50_B7LMM6 Putative uncharacterized protein n=3 Tax=Enterob... 477 e-133 UniRef50_A4VFG3 GGDEF domain protein n=5 Tax=Proteobacteria RepI... 475 e-132 UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 472 e-131 UniRef50_B5Y2I5 Diguanylate cyclase n=6 Tax=Enterobacteriaceae R... 471 e-131 UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthrop... 467 e-130 UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 465 e-129 UniRef50_D0SV00 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 456 e-127 UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter di... 443 e-123 UniRef50_C6RKE1 Diguanylate cyclase n=2 Tax=Acinetobacter radior... 442 e-122 UniRef50_B6JHB4 Putative ggdef family protein n=1 Tax=Oligotroph... 435 e-120 UniRef50_B8KHV5 Ggdef domain protein n=1 Tax=gamma proteobacteri... 422 e-116 UniRef50_A0L865 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 410 e-113 UniRef50_D2L189 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW... 334 5e-90 UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydroge... 309 1e-82 UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 306 2e-81 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 292 2e-77 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 280 5e-74 UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 277 7e-73 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 277 8e-73 UniRef50_B6AS70 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 277 8e-73 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 275 2e-72 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 274 4e-72 UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 273 1e-71 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 272 2e-71 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 271 5e-71 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 270 5e-71 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 270 5e-71 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 9e-71 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 9e-71 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 269 1e-70 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 269 2e-70 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 268 3e-70 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 267 4e-70 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 267 5e-70 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 267 5e-70 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 267 6e-70 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 267 7e-70 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 267 9e-70 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 266 1e-69 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 266 1e-69 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 266 2e-69 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 265 3e-69 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 265 3e-69 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 265 3e-69 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 265 3e-69 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 265 3e-69 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 265 3e-69 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 265 3e-69 UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 264 5e-69 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 264 7e-69 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 263 1e-68 UniRef50_A1K902 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 263 1e-68 UniRef50_B9M9A9 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32... 263 1e-68 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 263 1e-68 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 262 2e-68 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 262 2e-68 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 262 2e-68 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 262 2e-68 UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 262 2e-68 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 262 3e-68 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 261 3e-68 UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 261 3e-68 UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium... 261 4e-68 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 261 4e-68 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 261 4e-68 UniRef50_A1K870 Hypothetical sensor protein n=1 Tax=Azoarcus sp.... 261 4e-68 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 261 4e-68 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 261 4e-68 UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with... 261 5e-68 UniRef50_Q6AMZ3 Putative uncharacterized protein n=1 Tax=Desulfo... 260 6e-68 UniRef50_B7K273 Response regulator receiver modulated diguanylat... 260 7e-68 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 260 8e-68 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 260 8e-68 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 260 9e-68 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 260 1e-67 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 260 1e-67 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 259 1e-67 UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiv... 259 1e-67 UniRef50_B0TV39 Diguanylate cyclase n=1 Tax=Shewanella halifaxen... 259 1e-67 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 1e-67 UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 259 1e-67 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 1e-67 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 259 2e-67 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 259 2e-67 UniRef50_C0QHN1 Putative diguanylate cyclase (GGDEF domain prote... 259 2e-67 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 2e-67 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 259 2e-67 UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 2e-67 UniRef50_Q1MZ89 Response regulator containing a CheY-like receiv... 259 2e-67 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 2e-67 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 259 2e-67 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 2e-67 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 258 3e-67 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 258 3e-67 UniRef50_Q0F205 Response regulator containing a CheY-like receiv... 258 4e-67 UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 258 4e-67 UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 R... 257 5e-67 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 257 5e-67 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 257 6e-67 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 257 6e-67 UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 257 6e-67 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 257 7e-67 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 257 8e-67 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 257 9e-67 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 257 9e-67 UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepI... 257 9e-67 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 256 1e-66 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 256 1e-66 UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=... 256 1e-66 UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella av... 256 1e-66 UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 256 1e-66 UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curviba... 256 1e-66 UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 256 1e-66 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 256 1e-66 UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinog... 256 1e-66 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 256 1e-66 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 256 1e-66 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 256 2e-66 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 256 2e-66 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 255 2e-66 UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 255 2e-66 UniRef50_C1SIQ7 Diguanylate cyclase (GGDEF) domain-containing pr... 255 2e-66 UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales Rep... 255 2e-66 UniRef50_A5IF46 Sensor histidine kinase n=5 Tax=Bacteria RepID=A... 255 2e-66 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 255 2e-66 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 255 3e-66 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 255 3e-66 UniRef50_B8G8L1 Diguanylate cyclase n=1 Tax=Chloroflexus aggrega... 255 3e-66 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 3e-66 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 255 3e-66 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 255 3e-66 UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n... 254 4e-66 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 254 4e-66 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 254 4e-66 UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodo... 254 5e-66 UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 254 6e-66 UniRef50_C9YCE2 Putative uncharacterized protein n=1 Tax=Curviba... 254 6e-66 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 254 6e-66 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 254 6e-66 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 254 6e-66 UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvest... 254 7e-66 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 254 8e-66 UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 8e-66 UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 253 8e-66 UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC... 253 9e-66 UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax... 253 9e-66 UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydroge... 253 1e-65 UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=... 253 1e-65 UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece ... 253 1e-65 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 253 1e-65 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 253 1e-65 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 253 1e-65 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 253 1e-65 UniRef50_Q2BP61 GGDEF/HAMP domain protein n=1 Tax=Neptuniibacter... 253 1e-65 UniRef50_Q47FN5 Response regulator receiver modulated diguanylat... 253 1e-65 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 253 1e-65 UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 1e-65 UniRef50_A7BV03 Sensor protein n=2 Tax=Beggiatoa sp. PS RepID=A7... 253 1e-65 UniRef50_A4BIU7 Response regulator containing a CheY-like receiv... 253 1e-65 UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 252 1e-65 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 1e-65 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 252 1e-65 UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG8... 252 2e-65 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 252 2e-65 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 252 2e-65 UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain... 252 2e-65 UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clos... 252 2e-65 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 252 2e-65 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 2e-65 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 252 2e-65 UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=De... 252 2e-65 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 252 2e-65 UniRef50_Q089K4 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 252 2e-65 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 252 2e-65 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 252 2e-65 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 252 2e-65 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 252 2e-65 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 252 2e-65 UniRef50_C6C1P7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 2e-65 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 252 2e-65 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 252 3e-65 UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 252 3e-65 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 252 3e-65 UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas Rep... 252 3e-65 UniRef50_A1HRZ7 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 252 3e-65 UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 252 3e-65 UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4... 251 3e-65 UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID... 251 3e-65 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 251 4e-65 UniRef50_C1SP72 Diguanylate cyclase (GGDEF) domain-containing pr... 251 4e-65 UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 4e-65 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 251 4e-65 UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepI... 251 4e-65 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 251 4e-65 UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteri... 251 4e-65 UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammapr... 251 5e-65 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 251 5e-65 UniRef50_Q2IXE2 Response regulator receiver modulated diguanylat... 251 5e-65 UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromob... 251 5e-65 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 251 5e-65 UniRef50_A1AK83 Response regulator receiver modulated diguanylat... 250 5e-65 UniRef50_B3E3B5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 250 6e-65 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 250 6e-65 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 250 6e-65 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 250 6e-65 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 250 6e-65 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 250 7e-65 UniRef50_Q47HY8 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 250 7e-65 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 250 7e-65 UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (... 250 7e-65 UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas camp... 250 7e-65 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 250 8e-65 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 250 8e-65 UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocy... 250 8e-65 UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 250 9e-65 UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax... 250 9e-65 UniRef50_C6XBN7 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP... 250 9e-65 UniRef50_C6MLU9 Response regulator receiver modulated diguanylat... 250 9e-65 UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acid... 250 9e-65 UniRef50_Q30WR5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desul... 250 1e-64 UniRef50_B3QT84 Diguanylate cyclase and serine/threonine protein... 250 1e-64 UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thala... 250 1e-64 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 249 1e-64 UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_Q2BMK3 Serine/threonine kinase with two-component senso... 249 1e-64 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_Q04S93 GGDEF domain receiver component of a two-compone... 249 1e-64 UniRef50_B7GIF3 Response regulator with a diguanylate cyclase ou... 249 1e-64 UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 249 1e-64 UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 249 1e-64 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 249 1e-64 UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 249 1e-64 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 249 1e-64 UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 249 1e-64 UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geob... 249 2e-64 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 249 2e-64 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 249 2e-64 UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomac... 249 2e-64 UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desu... 249 2e-64 UniRef50_D2L2B6 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW... 249 2e-64 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 249 2e-64 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 249 2e-64 UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B... 249 2e-64 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 249 2e-64 Sequences not found previously or not previously below threshold: UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 257 6e-67 >UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteriaceae RepID=YDDV_SHIBS Length = 460 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 459/460 (99%), Positives = 459/460 (99%) Query: 1 MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ 60 MEMYFKRMKDEWTGLVEQADP IRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ Sbjct: 1 MEMYFKRMKDEWTGLVEQADPLIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ 60 Query: 61 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY Sbjct: 61 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 Query: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE Sbjct: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 Query: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR Sbjct: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL Sbjct: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF Sbjct: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI Sbjct: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL Sbjct: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 >UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteriaceae RepID=D2TII3_CITRO Length = 460 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 378/459 (82%), Positives = 419/459 (91%) Query: 1 MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ 60 MEMY KRMKDEW LVEQ DP IR A+EIA HAH LSIEFYRIV DPHAEEFLSNEQ Sbjct: 1 MEMYLKRMKDEWVTLVEQTDPQIRRLASEIATRHAHDLSIEFYRIVLADPHAEEFLSNEQ 60 Query: 61 VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 VERQLK A+E+WI++VLS+ V+DVERLI++QHTVAEVHARIGIPVE+VEMGFRVLKK+LY Sbjct: 61 VERQLKHALEKWIVDVLSSGVEDVERLIKVQHTVAEVHARIGIPVELVEMGFRVLKKLLY 120 Query: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 P+I + A +KL +YHFSINSID+AMEVM+RAF+FS+SSA+KEDENYRIFSLLENAEE Sbjct: 121 PIIIDGHHDANDKLLIYHFSINSIDLAMEVMSRAFSFSESSAAKEDENYRIFSLLENAEE 180 Query: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 EKERQIAS+LSWE+DIIYKI+LD+D G+SLPLSQADFGLWFNHKGRHYFSGIAEVGHISR Sbjct: 181 EKERQIASLLSWEMDIIYKIMLDADFGNSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 LIQDFDG+F Q+ + L+N++ RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL Sbjct: 241 LIQDFDGLFLQSRETAKALSNKAARVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 TKLLNRRFLPTIFKREIAHANR GTPLS+LIIDVDKFKEINDTWGHNTGDEILR+VSQAF Sbjct: 301 TKLLNRRFLPTIFKREIAHANRAGTPLSILIIDVDKFKEINDTWGHNTGDEILRRVSQAF 360 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 YDNVRSSDYVFRYGGDEFIIVLTEA++ +TLR AERIR RVEKTK+K+ +G I LSLSI Sbjct: 361 YDNVRSSDYVFRYGGDEFIIVLTEATQADTLRIAERIRLRVEKTKIKSPDGATIPLSLSI 420 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 GAAMFNGHPDYERLIQIADEALY AKR+GRNRVELW + Sbjct: 421 GAAMFNGHPDYERLIQIADEALYTAKRQGRNRVELWSPA 459 >UniRef50_C6D9C2 Diguanylate cyclase n=5 Tax=Pectobacterium RepID=C6D9C2_PECCP Length = 471 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 184/456 (40%), Positives = 274/456 (60%), Gaps = 2/456 (0%) Query: 4 YFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVER 63 Y + + EWT L+ I+ A + +FY + D A FLS++QV Sbjct: 18 YNQVITSEWTQLIATTSQKSFNLLRAISEQKASDFADKFYSYMLKDQEASLFLSSQQVHD 77 Query: 64 QLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVI 123 +L +M +WI ++L+ + + LI Q + ++HARIGIPV++VE G R LK LY I Sbjct: 78 RLHGSMSKWIADILTNTGEHLVDLINHQKKIGQIHARIGIPVDLVERGARRLKWHLYEDI 137 Query: 124 FSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKE 183 A F+ S+DIA+E+M++ ++ S A+K +E+YR+FS+LENA E+E Sbjct: 138 AQVAEDKALCFDAMRFASISMDIAIEIMSKTYSQSHDLAAKNEESYRLFSILENASMERE 197 Query: 184 RQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQ 243 RQ AS+L+WE I+ + + L S LS ++FGLWFNHKG+ FS I + I+ +I Sbjct: 198 RQNASLLNWENAFIFSVATGTPLSSIQDLSDSEFGLWFNHKGKSSFSNIQGIRTIASIIT 257 Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKL 303 + D +T L + L +R+ + +I LL LF+EV + E G D LT L Sbjct: 258 ETDEYIRGY--STTALLTQQDYAPLLKAVRSKIYKINMLLGSLFDEVQKLESGKDTLTLL 315 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 LNRRFLPTI + EI+ A + TPLS+ +ID+D FK +NDT+GH GD IL+++++ Y++ Sbjct: 316 LNRRFLPTILRHEISLAMHSSTPLSIAMIDIDHFKTVNDTYGHAAGDNILKRIAEVLYES 375 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 R+SDYVFRYGG+EF+IVL E + ER+R +++ + NGE I +++S G A Sbjct: 376 TRNSDYVFRYGGEEFMIVLIETPKVAAHTIIERLRKKIQDHPIHLQNGESITMTISAGIA 435 Query: 424 MFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 +++GHPDYE LI+ AD+ALY AK GRNR+E + Sbjct: 436 VYSGHPDYECLIKAADDALYQAKANGRNRIEYAQEE 471 >UniRef50_C6P3V9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3V9_9PROT Length = 456 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 148/449 (32%), Positives = 248/449 (55%), Gaps = 3/449 (0%) Query: 9 KDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSA 68 +W L +Q + + +A L+ +FY + D A F+S++ V ++L ++ Sbjct: 11 AADWQQLHQQVPESTKKLICDTVDRYAGDLATQFYDYMLADKEANPFISHDIVSQRLHAS 70 Query: 69 MERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDY 128 M+ W+ + S Q D + + + Q V VHARI +P+ +V G R+LK+ + + ++ Sbjct: 71 MQGWLRELFSVQQHDPKEIYKYQCHVGVVHARIQMPISLVLRGSRLLKQAITEHLVETEL 130 Query: 129 SAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIAS 188 A+ +Q F ++++M MT ++ + + + DE+YR+F+L +N E+ERQ A+ Sbjct: 131 DRAKLVQATRFVSEVMELSMSAMTDSYVINVGKSVRTDESYRMFALGQNMLAERERQRAA 190 Query: 189 ILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGI 248 + W I+ +L D G ++FGLW HK F E+ I ++ + Sbjct: 191 LSEWAQHILLHLLGDEGTGVPEM-KHSEFGLWLQHKASIIFHDAPELERIRVCVEKLERT 249 Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRF 308 + R N + + Q+ + ++ LL LF+ E G D LT+LLNRR+ Sbjct: 250 LLPGLIEKR--RNGGNAREAMRQVEADIGEVKFLLTGLFDRFIEVESGRDSLTRLLNRRY 307 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 LPTI RE+A A + P ++L++D+D FK INDT GH++GD +L++ S +VR D Sbjct: 308 LPTILMRELALARNSDVPFAILLLDIDHFKNINDTHGHDSGDMVLQQASDLVTSSVRVGD 367 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH 428 ++FRYGG+E ++VL E ++ L+ AE IR R ++ +G+ + +++SIG A +NGH Sbjct: 368 FIFRYGGEELLVVLVEIGRDQALQVAETIRERFAAEPMRVGDGKVMQVTVSIGVAAYNGH 427 Query: 429 PDYERLIQIADEALYIAKRRGRNRVELWK 457 PDYER+++ AD+ALY AK GRNR EL Sbjct: 428 PDYERIVKDADDALYRAKNSGRNRCELAD 456 >UniRef50_C1DFY2 GGDEF domain protein n=4 Tax=Gammaproteobacteria RepID=C1DFY2_AZOVD Length = 464 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 159/452 (35%), Positives = 257/452 (56%), Gaps = 2/452 (0%) Query: 9 KDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSA 68 EW L+ Q P+ A+ E+A H L FY + D A FL++EQV+ +L Sbjct: 10 AAEWKLLLGQFPAPVVAQIRELATTHQSELPGYFYEQMLQDEQAMLFLTHEQVKSRLHGT 69 Query: 69 MERWIINVLSAQVDD--VERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSS 126 + +WI++V S DD ++ LI Q + E+HARI IP+ +V G R L++ L+ ++ Sbjct: 70 LRQWIVSVFSMSDDDAALQALIAQQKQIGEIHARIKIPIHLVLRGARHLRERLFVLLRQR 129 Query: 127 DYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQI 186 KL ++D+AME+M+RAF+ + S+ +E YR+FS+ +N E+ERQ Sbjct: 130 PLDPEHKLFGQRLISETVDLAMEIMSRAFSDAYDRNSRSEEGYRLFSVAQNIGIEQERQR 189 Query: 187 ASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFD 246 +++L WE +++ + + LS ++FGLWF HKG H F G E I ++ D Sbjct: 190 SALLDWENHLMFDLAVGQLATQLPRLSNSEFGLWFRHKGAHAFQGSRETELILEGMRQID 249 Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 + + R++ L +R II L LFE+ + E G DVLT +LNR Sbjct: 250 EVLLPLFGQPAAGADADQRLQNLRLLREQTKGIIFHLDNLFEQANVLESGRDVLTHMLNR 309 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 +FLP I +E+A+A + +VL +D+D+FK IND +GH GD +L++++ ++ R Sbjct: 310 KFLPVILAKEVAYARQNERSFAVLAVDIDRFKHINDEFGHEAGDVVLQQLASLLSNHCRG 369 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 DYVFR GG+EF+++L + ++ L AE++R + + + + +D+ L++SIG A+ + Sbjct: 370 GDYVFRMGGEEFLVLLVDVTQAHALGVAEKLRQQAAQERFRLPGEQDLQLTVSIGVALHD 429 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 GHPDY+ L++ AD ALY AK GRN+V L + Sbjct: 430 GHPDYQHLLRQADRALYEAKHGGRNQVVLARK 461 >UniRef50_B7LMM6 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B7LMM6_ESCF3 Length = 472 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 163/454 (35%), Positives = 264/454 (58%), Gaps = 2/454 (0%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKS 67 + EW L+ Q ++ H+L FY + + FL+ EQV +L S Sbjct: 17 LFTEWQTLINQTPVAAHELLLSLSDKELHHLVTIFYDYMLSHTESALFLNTEQVNSRLSS 76 Query: 68 AMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD 127 +M W+ VL + D+ L+ QH + VHARIG+P+++V R +K+ LY ++ Sbjct: 77 SMFHWLRAVLGSSQQDLHELLAKQHEIGIVHARIGLPIDLVARAARKIKEELYQILALRK 136 Query: 128 YSAAEKL-QVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQI 186 +AA + FS +ID A+E MT +++ S ++ +E YR+ ++ ++ E+ERQI Sbjct: 137 VAAAHIITDAICFSGLAIDTAIEAMTASYSPSVQNSVNAEEQYRLLTIYDDINVERERQI 196 Query: 187 ASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFD 246 S+ WE IY I + + LS+++FG+WF HKG+H + + L++ D Sbjct: 197 RSLTDWENQFIYNIATGLPIKDLVFLSKSEFGMWFAHKGKHILGKSVLLSGMETLMKKID 256 Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 Q + L R+K L +IR +QI LL +FE++ + E G D LT+LLNR Sbjct: 257 HHLKQELPLHAQLTT-DERLKLLQEIRQLTAQIHILLSSMFEDLVKEENGKDSLTQLLNR 315 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 RF+PTI +REI+ A + P ++ ++D+D FK+IND +GHN GD L+ VS Y+++RS Sbjct: 316 RFIPTIMRREISIALHSRKPFALAMLDIDYFKQINDRYGHNAGDNTLKNVSAMIYEHIRS 375 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 SDYVFRYGG+EF+I+L E ++ E +R+++ +++A+ E ++++SIG A ++ Sbjct: 376 SDYVFRYGGEEFMILLVETELSQAKIILENLRNKMAGLRIQASASESFSVTVSIGVAEYD 435 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 HPDY+ LI+ AD ALY AK +GRNRVE+++ + Sbjct: 436 YHPDYKLLIEKADSALYYAKSQGRNRVEVFQPHM 469 >UniRef50_A4VFG3 GGDEF domain protein n=5 Tax=Proteobacteria RepID=A4VFG3_PSEU5 Length = 456 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 167/455 (36%), Positives = 263/455 (57%), Gaps = 5/455 (1%) Query: 5 FKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQ 64 ++ EW L++ A + + L+ FY + DPH+ FLS++QV+ + Sbjct: 6 NHQLVAEWLRLLDGYPAEAAAALQAVTAEKSQELAEHFYSQMLADPHSASFLSHDQVKNR 65 Query: 65 LKSAMERWIINVLSAQVD-DVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVI 123 L +M++WI+ V S+ D+ +I +Q V ++HARI IPV +V G R LK L ++ Sbjct: 66 LGKSMQKWIVTVCSSTAHSDLNAVIDLQRKVGDIHARIEIPVSLVLRGSRSLKGRLRQLL 125 Query: 124 FSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKE 183 + + + + + ID+A+E++ A++ S S+ +E YR+FS+ +N EKE Sbjct: 126 EQRELAEPIRRKAARMGADLIDLAVEIICFAYSQSHDRNSRAEEAYRLFSVSQNIGVEKE 185 Query: 184 RQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQ 243 RQ A++L WE +++ + + + G+ L+ ++FGLWF HK H F G E I I Sbjct: 186 RQRAALLDWENQLMFDLAIGNLTGTLPQLAGSEFGLWFRHKASHAFQGSPESASILEYIT 245 Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKL 303 D + ++ L++ + R+ L QIR I LL LFE+ + E G DVLT+L Sbjct: 246 QID----EELKAIATLDDAAGRLGKLHQIREQTRSIKFLLDSLFEQANDLEAGRDVLTRL 301 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 LNR+FLP + +E+ +A ++ VL IDVD FK INDT GH+ GD+IL++V N Sbjct: 302 LNRKFLPVVMAKEVLYARQSNNTFGVLAIDVDHFKRINDTHGHDAGDQILQQVGALLASN 361 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 R DY FR GG+EF++VL + N+ L AE++R R+ + + ++GE + +++SIG A Sbjct: 362 TRGGDYAFRLGGEEFLLVLVDIDTNKALAAAEKLRERIAREHFRLSSGEVLQVTVSIGMA 421 Query: 424 MFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 + +GHPDYERL+Q AD+ALY AK GRNR L+ Sbjct: 422 VHDGHPDYERLLQQADQALYQAKHGGRNRCVLYAG 456 >UniRef50_B4SPL2 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SPL2_STRM5 Length = 471 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 172/453 (37%), Positives = 257/453 (56%), Gaps = 5/453 (1%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKS 67 + + W + QA P A A L+ FY ++ D A FLS++QV+++L+ Sbjct: 13 LAEAWQQCLLQAGPAATALLHAAAADAPPALAQRFYEVLLQDTRARRFLSHDQVKQRLQP 72 Query: 68 AMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD 127 AM+RW+ +L+ + + Q + +VHAR+GIPV++V G RVLK L+ + Sbjct: 73 AMQRWLAQLLTTDASGIANTVASQRIIGDVHARVGIPVDLVTRGARVLKHELFVRLRDDA 132 Query: 128 YSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIA 187 + +DIAME MT A+T + +++ D YR+FSL++N E+ERQ A Sbjct: 133 PDSDTAFAAIDCLSAIMDIAMEGMTLAYTHARERSTRADAAYRLFSLVQNVGTERERQRA 192 Query: 188 SILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDG 247 +L WE ++Y + + L+ ++FGLWF HKG F +E + +L+ DG Sbjct: 193 LLLDWENALLYALAGHVQASDNASLATSEFGLWFTHKGIPSFGESSETQQVGQLMARIDG 252 Query: 248 IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRR 307 + + + R+ L IR ++ I TL+ LFE + + G D LT LLNRR Sbjct: 253 HLQRASGDA-----PAQRLAVLPAIREDLAAIRTLMTLLFERIGELDAGSDALTNLLNRR 307 Query: 308 FLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSS 367 FLPT+ +REI A R TP S+L++D+D FK IND GH+ GD L+ V+ R S Sbjct: 308 FLPTVLRREIELATRNRTPFSLLLLDLDHFKAINDGHGHDAGDRALQHVAGVLGQLTRGS 367 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG 427 DY+FRYGG+EF++VL ASE++ AE +R ++ K+ + ANG+ ++L+ SIG A +G Sbjct: 368 DYLFRYGGEEFVVVLVAASESQAAVIAESLRRQIAKSPVPLANGQVLSLTASIGVAGHDG 427 Query: 428 HPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 HPDYERL+ AD A+Y AKR GRNRV + A L Sbjct: 428 HPDYERLMARADAAMYEAKRSGRNRVVVASADL 460 >UniRef50_B5Y2I5 Diguanylate cyclase n=6 Tax=Enterobacteriaceae RepID=B5Y2I5_KLEP3 Length = 464 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 162/459 (35%), Positives = 254/459 (55%), Gaps = 2/459 (0%) Query: 2 EMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQV 61 + Y + EW L + P +RA ++A + L+ FY + DP LS E V Sbjct: 6 QKYIAVIFKEWLPLYDSLTPDVRALLKKMADERSSMLATRFYDFIFQDPDIARHLSYELV 65 Query: 62 ERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYP 121 E +L ++ W+ +L+ + +D++ L + Q+ + +H+RIGIP E V G R +K L Sbjct: 66 EERLSRSLAGWVQQILTCEKEDLQALAERQYQIGSIHSRIGIPAEAVLRGARQIKSGLVE 125 Query: 122 VIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEE 181 I S + + H++I ++++A+E+M A+T S A+K +E +R++SL++N E Sbjct: 126 AIRDSQVARDTGIAAIHYAIMAMNMAVEMMCHAYTLSHYRATKNEEAFRLYSLMDNVPME 185 Query: 182 KERQIASILSWEIDIIYKILL-DSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 +Q AS+ WE I+ I+ + ++ LS+++FGLWF HK YF+ ++G I+ Sbjct: 186 YGKQQASLSGWENSAIFNIVSENRTDLNATLLSESEFGLWFRHKCVRYFNHNPQMGEITE 245 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 LI D + + ++ ++ + L +I I + L LF +S+ + G D L Sbjct: 246 LIGQVDALITEWRTAEQDAGYKNTQ-SLLQKIHIHCQHISSQLGVLFSSLSQMQNGKDAL 304 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 T LLNRR+LP + K E+ A PL+V IID+D FKEIND WGH GD ++ V+ Sbjct: 305 TSLLNRRYLPVVLKHEVTLAIEYDLPLTVAIIDIDFFKEINDKWGHMVGDRAIKHVADLL 364 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 DN+RSSDY+FRYGG+EF++VL E E ER+R ++ + I ++ SI Sbjct: 365 SDNIRSSDYLFRYGGEEFLLVLVETRAAEAFPLLERLRKKIGQLAFNVGGDTQIPITASI 424 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 G A GHPDY L++ AD ALY AKR GRN V++ K Sbjct: 425 GFAAHTGHPDYNLLLRDADNALYAAKREGRNCVKMHKGG 463 >UniRef50_A6X556 Diguanylate cyclase n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X556_OCHA4 Length = 473 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 158/445 (35%), Positives = 247/445 (55%), Gaps = 2/445 (0%) Query: 10 DEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAM 69 EW LV ++ H FY + + A FLS + V+ +L +++ Sbjct: 23 TEWVELVSGLPEEHALFLRDLIDRHREQFVGVFYNRLMNNRDAATFLSQKMVQERLHNSL 82 Query: 70 ERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDYS 129 W++ + DDVE I+ Q V EVHARI +P+ +V G R+LK + + S Sbjct: 83 SDWLLKMFQRTADDVEAFIREQRKVGEVHARIDVPIHVVMQGARLLKNEIVRQLKLETAS 142 Query: 130 AAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASI 189 ++ N+IDIA+E+M++AF +++ DE YR F+L + E+E Q A++ Sbjct: 143 REVLARLIVHVSNAIDIAIEIMSQAFVKDARESAQTDEAYRAFTLSHDFPLERESQRAAL 202 Query: 190 LSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIF 249 + W +++ + +SD L+ +DFGLW HK FS + +I R ++ D + Sbjct: 203 MEWSQSLLFNLYGNSDS-PLHSLASSDFGLWLQHKADLMFSNSGTLENIRRNVEHIDNVL 261 Query: 250 NQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFL 309 + + R +N + L + + ++ LL ELF+ + E G D LT+ LNRRF+ Sbjct: 262 LPAINSARK-DNPAGLAASLALFQTKIGEVKFLLSELFQAAAAMETGRDPLTRALNRRFM 320 Query: 310 PTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDY 369 P+I RE+ A++ LSVL+ID+D FK INDT+GH++GD +L++V++A R SD+ Sbjct: 321 PSILTREVRMASQKAMDLSVLMIDIDHFKNINDTYGHSSGDAVLQQVAEAILSLCRPSDF 380 Query: 370 VFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP 429 VFRYGG+EF++ L EA EN+ AE +R ++ + L +G +++LSIG A FNGHP Sbjct: 381 VFRYGGEEFLVALVEADENKAFTIAEELRKQIAQQPLNLPDGARQSVTLSIGVAAFNGHP 440 Query: 430 DYERLIQIADEALYIAKRRGRNRVE 454 DY L+ AD ALY AK+ GRNR E Sbjct: 441 DYSHLVNAADRALYRAKQAGRNRCE 465 >UniRef50_A1KC37 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KC37_AZOSB Length = 475 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 156/454 (34%), Positives = 245/454 (53%), Gaps = 2/454 (0%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKS 67 ++ +W L + P +R ++ + H ++ FY + D A FLS+E V ++L+ Sbjct: 22 IESDWLKLFDAVSPSLREAVRDVVLEHRAAMADAFYARMMADGDARPFLSHEAVHQRLRF 81 Query: 68 AMERWIINVLSAQVDDVERLIQI-QHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSS 126 +M+RW+ + S Q V EVH+R+ +PV +V G RVLK + + +S Sbjct: 82 SMQRWMETLFSCADHAAFAAAMALQRHVGEVHSRVDLPVNLVARGARVLKGEIAARLPAS 141 Query: 127 DYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQI 186 A +Q + N ID+A EVM+ A+ S A++ DE YR+FS +N E+ERQ Sbjct: 142 GLDRAALVQAVLYVDNLIDLAFEVMSSAYVASHERATRIDEAYRVFSYGQNMSLERERQR 201 Query: 187 ASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFD 246 AS+L WE + ++ +S + FGLW HK F G AE+ I ++ D Sbjct: 202 ASLLDWENRFLQAMMAGQSGDELPLISDSAFGLWLQHKAVAVFEGSAELPSIREGMRRLD 261 Query: 247 G-IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLN 305 + + +L+ R + + +++ + Q+ L+ +FE E G D LT+LLN Sbjct: 262 RDLIPLCRQQMESLDERGESRRLIKAVQSELGQLKFLIGAMFERFVDLESGKDALTQLLN 321 Query: 306 RRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVR 365 RRFLP I RE A ++L++DVD FK+IND GH+ GD +L++++ + VR Sbjct: 322 RRFLPAILTRETEIARNQHKSFALLLVDVDHFKQINDVHGHDAGDRVLQQIASLLLNTVR 381 Query: 366 SSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF 425 S D+VFRYGG+EF+++L E R AE+IR RV++ + + ++ S+G A+ Sbjct: 382 SGDFVFRYGGEEFLVLLVEVDRQHAARVAEKIRQRVQQETFLLPDSRQLQVTASVGVALH 441 Query: 426 NGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 +GHPDY+RLI AD+ALY AK GRNR E + Sbjct: 442 DGHPDYQRLINQADDALYRAKTGGRNRCEFATDA 475 >UniRef50_D0SV00 Predicted protein n=2 Tax=Acinetobacter RepID=D0SV00_ACILW Length = 465 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 142/459 (30%), Positives = 251/459 (54%), Gaps = 7/459 (1%) Query: 3 MYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVE 62 R+ ++W + + A H+ L EFY+ + I+ + EF S++ ++ Sbjct: 4 ECMARLAEQWEQICQNYSSDDLLHAFHFIQDHSLILVEEFYKNMLIEKESAEFFSDDLIQ 63 Query: 63 RQLKSAMERWIINVLSAQVDD-VERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYP 121 ++L+ + W++ ++ +Q Q V VHAR+GIP ++ G R +++ ++ Sbjct: 64 QRLRDTLNAWLLESFGVGINKRYADAVQKQAMVGHVHARVGIPSWLIMRGVREIERKMFE 123 Query: 122 VIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEE 181 ++ + + + L + + + A EVM R++ + + +YR+FS +++ + Sbjct: 124 LLDENPHHSM--LTTCSYIVQIMGFATEVMCRSYEAKTAMNQEIKHSYRVFSAMQDVAVQ 181 Query: 182 KERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRL 241 K++Q +S+L WE ++++K+ + + + LS+++FGLWF HK + F+G +V I Sbjct: 182 KDKQRSSLLDWENELMFKVFSEHEKLNHPMLSKSEFGLWFIHKASYAFTGSDQVDLIIER 241 Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 I D + M + +++ + + +IR+ +I L+ +LF+ E G D LT Sbjct: 242 IYQVDELNQDIM----DCTDKNNMLGLIQRIRDLNREIQLLVDQLFQVAEYIESGNDSLT 297 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 +LLNRR+L TI REI + + TPLS+L ID D FK IND +GH GD L+ +++A Sbjct: 298 QLLNRRYLNTIISREITFSRKNHTPLSLLAIDADYFKSINDKFGHAAGDLALKFLAEALQ 357 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 + SDY FR GG+EF+++L + E L AE IR +E + +A G+ ++SIG Sbjct: 358 KYSQGSDYAFRVGGEEFLLLLVDTDEKRALNIAESIRKYIENGMINSAQGQQFKFTVSIG 417 Query: 422 AAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 +++GHPDY+R + AD ALY+AK GRNRV + SL Sbjct: 418 CVLYDGHPDYQRFLNAADSALYMAKNNGRNRVYMAHQSL 456 >UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCI9_GLUDA Length = 472 Score = 443 bits (1139), Expect = e-123, Method: Composition-based stats. Identities = 130/453 (28%), Positives = 225/453 (49%), Gaps = 4/453 (0%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKS 67 + E R ++ L FY P + +L++ + +L+ Sbjct: 9 VDAELRRAFTNVPDATRLLVHDVVERLTPALVAAFYDHFTSHPEGQTYLTDPETTERLRG 68 Query: 68 AMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD 127 + W+ + SA +R+ Q + HAR IP+ +V G ++++ + + + Sbjct: 69 TLMVWMAELFSAAPQHPQRMADSQRHIGRFHARSSIPIHLVSEGVSLVQRTIIHALGHEN 128 Query: 128 YSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIA 187 + E + N + A VMT + A+ D YR+F+L ++ E E Q A Sbjct: 129 LTHEELTDAVLYVTNVLTAATGVMTFTYWRQRERAASNDVAYRLFALNQDLSREGEGQKA 188 Query: 188 SILSWEIDIIYKILLDSDLGSS--LPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDF 245 ++L W +++ + + + L++++FGLW +K F G ++ I Sbjct: 189 ALLGWSYNVLRSLYVAKTPEDLQTMGLARSEFGLWVTYKVGLLFEGTDISALLTGQIAKV 248 Query: 246 DGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLN 305 D + ++ L + V++I++ L LF D LT++LN Sbjct: 249 DNELLPAILE--DMAAERDISPALAALHAGVTEILSSLEVLFHASRSSNDVEDPLTRVLN 306 Query: 306 RRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVR 365 RRFLP+I E+ A++TG P+SVL +D+D FK INDT+GH GD +L+ +++ + R Sbjct: 307 RRFLPSIISYELRVAHQTGRPMSVLFLDIDHFKHINDTFGHAAGDSVLQAIARVLEEASR 366 Query: 366 SSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF 425 SD +FRYGG+EF++++ + + L AER+R ++E T ++ +G +++SIGAA + Sbjct: 367 LSDVIFRYGGEEFLVLMGDTDTEQMLIGAERLRQKIENTPIRLPDGNLHQITVSIGAAQY 426 Query: 426 NGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 GHPDYE L++ AD ALY AKR GRNR+E+ A Sbjct: 427 AGHPDYEELLRAADAALYRAKRNGRNRIEVADA 459 >UniRef50_C6RKE1 Diguanylate cyclase n=2 Tax=Acinetobacter radioresistens RepID=C6RKE1_ACIRA Length = 452 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 144/453 (31%), Positives = 253/453 (55%), Gaps = 7/453 (1%) Query: 2 EMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQV 61 E + ++W + Q A+ ++ L EFY+ + + A FLS+E V Sbjct: 3 EQCITMLAEQWKDICGQYSATDLNYTAQFIQDNSFLLVDEFYKNMMQEKEASYFLSDEIV 62 Query: 62 ERQLKSAMERWIINVLSAQ-VDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY 120 + +LK+ + +W+++ + + E ++Q Q + VHARIGIP ++ G R ++K ++ Sbjct: 63 QSRLKTTLNQWLLDCFNMPFKQNYEEVVQRQLVIGNVHARIGIPSWLIMRGIREIEKKVF 122 Query: 121 PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE 180 + + + V ++ + SI A E+M R++ + + YR+FS +++ Sbjct: 123 SL--QASRTQQNIYAVTNYIVQSIGFASEIMCRSYEANIEINNDIKHTYRLFSAMQDVSI 180 Query: 181 EKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR 240 +K++Q +S+L WE ++++K+ DS + L LS+++FGLWF HK + FSG +V I Sbjct: 181 QKDKQRSSLLDWENELMFKVFSDSASFNHLLLSKSEFGLWFIHKAAYAFSGTDQVQIIID 240 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL 300 I + D + + + +++ + + +IR +I L+ +LF+ G D L Sbjct: 241 RIYEVDKLNLAVLES----QDKANAIALIQRIREKNREIQHLVDQLFQVSEYIGSGNDSL 296 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 T+LLNRR+L TI REI + + G+PL++L ID D FK IND +GH GD L+ +++ Sbjct: 297 TQLLNRRYLNTIINREINFSRKNGSPLTLLAIDADHFKGINDKFGHAAGDLALQFLAEVL 356 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 + + SDY FR GG+EF+++L ++ + AE IR R+E+T +++ G ++S+ Sbjct: 357 LECTKGSDYAFRIGGEEFLLLLVDSDLSRAQSVAENIRMRIEETVIRSTMGVSFNFTVSV 416 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 GA +++GHPDY+R + AD ALY AK GRN V Sbjct: 417 GAVLYDGHPDYQRFLDAADSALYAAKNNGRNNV 449 >UniRef50_B6JHB4 Putative ggdef family protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JHB4_OLICO Length = 463 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 122/447 (27%), Positives = 217/447 (48%), Gaps = 5/447 (1%) Query: 5 FKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQ 64 + ++ E + +R ++ + + +FY +V P A FL ++ V + Sbjct: 16 MEAIEAELKEVYRVTPSSVRTTVYDVIRRTSAEFTDQFYDVVINQPGAHFFLDHQLVNER 75 Query: 65 LKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIF 124 L AM+ W+ ++ + + I+ Q V VHARI +P +V GFR LK+ + + Sbjct: 76 LHRAMKEWLDDLFKRDGIEAKSFIRRQQQVGWVHARIKVPERLVSRGFRELKRNIIISLR 135 Query: 125 SSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKER 184 + S + +F +D+ +VMT A+ + + DE +R+FSL +N E+ER Sbjct: 136 GTRLSREDLSAAIYFVSALLDLGFDVMTCAYIDRSERSVRSDEAFRLFSLGQNLVTERER 195 Query: 185 QIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQD 244 Q AS+ W + + + + + +P+SQ+DFGLW H+ F +E + I++ Sbjct: 196 QRASLSEWAQSFFFTLQVGTSPLTFVPISQSDFGLWVFHRAILLFDRSSEYERLIDAIKN 255 Query: 245 FDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLL 304 + I + R+ +L +I+ + +I +LL LF+ + D LT+LL Sbjct: 256 VEQI-----SELVTFSPPQQRIDYLRKIKAAIGEINSLLALLFDNSLEAQGARDTLTQLL 310 Query: 305 NRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV 364 NR+F+ T+ EI + P SVL+I++D+F ++ G GD I+++ +Q +D+ Sbjct: 311 NRKFVNTVISAEITAQKVSTHPFSVLMIEIDRFDQLRSRLGETGGDIIVQRTAQLIFDST 370 Query: 365 RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAM 424 R+SD VF G + F++V EA+ + A+ I R T + SLS+G Sbjct: 371 RTSDSVFSMGRETFLVVYVEANLLAAKQLAKFITDRYATTHFSVNGETVLDCSLSVGVVE 430 Query: 425 FNGHPDYERLIQIADEALYIAKRRGRN 451 ++GHPD L+ A L K+ R+ Sbjct: 431 YDGHPDPRELVNRAQRVLLEEKKIKRD 457 >UniRef50_B8KHV5 Ggdef domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHV5_9GAMM Length = 449 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 132/449 (29%), Positives = 217/449 (48%), Gaps = 9/449 (2%) Query: 9 KDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSA 68 K +++ LVE + + ++ FY+ + D A FL + +VE ++ Sbjct: 3 KRDFSNLVENTPSATVDYVSSVLRESCSDIAAIFYQEMLSDSEAAAFLDHNKVESRMFGM 62 Query: 69 MERWIINVL-SAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD 127 E W VL S+ + L I + E HAR+GIP E V G +V+K + S Sbjct: 63 FEAWAAEVLQSSAAIQPKELKAIHLKIGETHARVGIPAEQVIHGTQVVKAFCVKALI-SA 121 Query: 128 YSAAEKL---QVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKER 184 + +K + ++ D + +M +A+ + + R + E ER Sbjct: 122 WDGQDKHQLDDGVLYVMSLFDTCLSIMNKAYLQRTLEDERNAQALRFRLASVDLSVECER 181 Query: 185 QIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQD 244 ++SW D+ Y S+ G + + FG W +HK +F E+ I L+ + Sbjct: 182 MKTELISWSRDMAYDDW-PSNSGKQSSIYASMFGAWLSHKAPLHFGDFPELDRIRGLVAE 240 Query: 245 FDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLL 304 +G + + ++ ++ R +R Q+ L+ EL ++ R D LT L Sbjct: 241 LNGCVERQLSDSFKASD---RSGLFADVRRLTDQVCFLIDELAQKSQREMDSRDPLTSLY 297 Query: 305 NRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV 364 RRFL I KRE A+ G S+L+IDVD FK++NDT+GH GD +L++V++ V Sbjct: 298 GRRFLDGILKRENQIAHSAGDAYSLLMIDVDDFKQVNDTYGHAIGDRVLKQVAKVLTHVV 357 Query: 365 RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAM 424 R +D+ FRYGGDE ++VLT + + R A+ I + + +G I + +SIG A Sbjct: 358 RQTDFAFRYGGDELLVVLTSSDIDAARRKADAILQSIRAAPVNLDDGRVIPIKVSIGVAE 417 Query: 425 FNGHPDYERLIQIADEALYIAKRRGRNRV 453 + GHPDYE +++ ADEA+Y AK G+N+V Sbjct: 418 YRGHPDYETMLKRADEAVYAAKTAGKNQV 446 >UniRef50_A0L865 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L865_MAGSM Length = 453 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 119/452 (26%), Positives = 218/452 (48%), Gaps = 5/452 (1%) Query: 6 KRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQL 65 R + + D ++ + FY + A FL + V+ +L Sbjct: 3 ARDEQRLKDIYLGVDAEKVNFIGDLIKDRLNQTVERFYIELLEVESARFFLDSALVKERL 62 Query: 66 KSAMERWIINVLSAQVDD-VERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIF 124 ++ W+ + S + DD +E++ Q + VHARI IP+ +V G R+L++ + + Sbjct: 63 HGSLTEWLQMLFSHKDDDTLEQMFAFQKNIGNVHARINIPMHLVVEGMRILRREIICFLS 122 Query: 125 SSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKER 184 SD + + +D + ++ ++ +S + ++ R+ E ER Sbjct: 123 ESDIPRQRLVDLVVLVGEVLDHNLSLINESYVRMSASYERNNQALRLQLSPSAQALECER 182 Query: 185 QIASILSWEIDIIYKILLDSDLGSSLP-LSQADFGLWFNHKGRHYFSGIAEVGHISRLIQ 243 ++ W ++++L + + LP L +A+FGLW HK ++ I + IQ Sbjct: 183 LRGTLRGWSNQ-LWRVLGGRGIETELPSLGRAEFGLWMFHKAPLVLPQYEQLHTIQQNIQ 241 Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKL 303 D + + + +LN ++ L + + ++ I L + E + E G D LTK+ Sbjct: 242 AMDALLGRQRLSQEHLN--AVSRDTLSAVDDQLNSIELALDMMIEAILAQESGRDPLTKV 299 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 NRRFL ++ K E+ + R L+ D+D FK INDT+GH+ GD +L++ ++ Sbjct: 300 YNRRFLDSVVKHEMEVSMRHEIRFGFLLCDIDHFKTINDTYGHDAGDAVLQQFAERLSSA 359 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 R +DYVFR+GG+EF+ V + S AE++R +E+ +GE I ++ S G A Sbjct: 360 ARVNDYVFRFGGEEFLFVYGDMSPQRLEHLAEKVRHCIEQELFDLPSGEKIHITASFGGA 419 Query: 424 MFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + +G+P++ + +++ DEALY AK GRNR + Sbjct: 420 VHDGNPNFHKTLKLTDEALYEAKHSGRNRCII 451 >UniRef50_D2L189 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L189_9DELT Length = 579 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 101/464 (21%), Positives = 182/464 (39%), Gaps = 27/464 (5%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQ--VERQL 65 + +E + P + + + F + + + LS+ Q +E +L Sbjct: 113 ISEELKRSLGATRPTGAIARRNVDINLFSATARRFSQTLLSENALVTTLSDPQSGLEARL 172 Query: 66 KSAMERWIINVLSAQVDDV----ERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYP 121 + ME+ V + + +++ Q+ + + + +E R L Sbjct: 173 GAIMEQLGQIVAGSTNAVLLLREVDVLEKQYRITRQRPSMQAALNKIEALRRSLAGDAEL 232 Query: 122 VIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEE 181 + + + +D + + + F+ + + + + + SL E Sbjct: 233 SPAQRQEAEKRIRDYVLVTGSILDTVVALTANSNDFALQARAVDPISEELKSLS---AVE 289 Query: 182 KERQIASILSWEIDIIYKILLDSDL---------GSSLPLSQADFGLWFNHKGRHYFSGI 232 ER I W I I+L S L G L S + +G Sbjct: 290 VERARGRIR-WASIIAGGIILASALLGLGCIIAVGKVLHASITSKIVALTRHASAIRAGH 348 Query: 233 AEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE--EV 290 +V + + + T + + ++ ++R ++ REL + Sbjct: 349 LDVVASNGGADELGVLAETFNAMTHRIRDLVENLEE--KVRQRTQELAQTNRELDHKNQA 406 Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 D LT L NRR + + E A R GTP S ++ID+D FK+IND +GH GD Sbjct: 407 LAVLSLTDRLTGLCNRRKIDQAVRAEWRRAKRYGTPFSAVMIDLDNFKDINDRFGHGKGD 466 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 E+L +V+ R +D V R+GG+EF+++ + + AE IR + T+ + Sbjct: 467 EVLVRVADILIAMTRETDTVGRWGGEEFLLICPQTGLRAAMSLAENIRQEIAATEFPSIG 526 Query: 411 GEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 G L+ S G A F+G D +++ AD ALY AK +GRNR+E Sbjct: 527 G----LTASFGLAAFSGDADPRQIVDRADAALYQAKAKGRNRIE 566 >UniRef50_A8UZ69 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZ69_9AQUI Length = 419 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 103/436 (23%), Positives = 188/436 (43%), Gaps = 30/436 (6%) Query: 31 AVAHAHYLSIEF-YRIVRIDPHAEEF---LSNEQVERQLKSAMERWIINVLSAQVDDVER 86 + L++++ Y D + F +S + ++ + + +R+I D Sbjct: 3 VLKEKIDLALKYVYNYYLNDDYMYRFFKGISFKDIQHYINTGFKRYISG-------DTNE 55 Query: 87 LIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDI 146 + V + + +P L+ L S E L + D+ Sbjct: 56 AKRYFFKVGDTFYKENVPFSFFYDSINKLRYYL---------SKDETLNCAEYVDKLEDM 106 Query: 147 ---AMEVMTRAFTFSDSSASKE--DENYRIFSLLENAEEEKERQIASILSWEIDIIYKIL 201 A + + + K+ E RIF N + W ++ I Sbjct: 107 TYFAENTFSYGYLVNLMKNDKDWIREELRIFKGKGNVSILSGYVKDHFI-WLNKLLEDIK 165 Query: 202 -LDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLN 260 L S L + +FG N+ + + R+ N+ Sbjct: 166 KLRSKPSIELNPNICEFGKKINNGDLDSILTLKYKDIVKRIHDSIHQSANEIYFFIEKRA 225 Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 ++L ++++ +NT S++++ + + S E +D LT L NRR + I + + Sbjct: 226 FKNLLIEYINLFKNT-SRLVSTIALVHSVSSEAEANIDPLTHLFNRRAMEIILTNQYTLS 284 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 TG + + D+D FK+INDT+GH GD +L++V+ +R SD+VFRYGG+EF+I Sbjct: 285 KITGNDFVIGLADMDDFKKINDTYGHLVGDCVLKEVAVRIKSVLRKSDFVFRYGGEEFLI 344 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIAD 439 +L ++ E L+ E++R + +K N I +++SIGAA +P+Y E+LI++AD Sbjct: 345 LLPYTTKREALKVLEKVRQSIIAEPIKCKNNM-IDITISIGAASLTENPEYLEKLIELAD 403 Query: 440 EALYIAKRRGRNRVEL 455 + LY AKR G+N+V + Sbjct: 404 KRLYKAKRTGKNKVVV 419 >UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH70_DESMR Length = 570 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 101/475 (21%), Positives = 177/475 (37%), Gaps = 39/475 (8%) Query: 8 MKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRI---------DPHAEEFLSN 58 + + + +I + + F + + DP + Sbjct: 105 LSENLRRAMAAMPDGSDMAKRKIDMRFFTSTAKRFSQTLLSENELVILVADPETGLDVQM 164 Query: 59 EQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKI 118 RQL +++ W + + ++ Q+ ++ + V VE R++ Sbjct: 165 NAAVRQLGVSLKGWDELAFAVREI---SVLIQQYQLSRQRPVMQTAVNKVEALRRLIA-- 219 Query: 119 LYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENA 178 + A K + +A +M A + S ++ + + + E+ Sbjct: 220 -----ATPGLETARKTEALRLCDTFDKVAARLMDTAVSMSANANDFALQARAVDPIAEDL 274 Query: 179 ----EEEKERQIASILSWEIDIIYKILLDSDLGSS--------LPLSQADFGLWFNHKGR 226 E ER I W + I+L S L L + + Sbjct: 275 RRITAVEVERAKGRI-GWATRLAGGIVLFSALLGLGCIFWVARLLHRAVTNRIVELTRYA 333 Query: 227 HYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL 286 G I D G+ + + + N L ++R ++ REL Sbjct: 334 GNVRDGHFGGAIDMAGSDEIGLLARALADM-NGRIHDLVGGLEDKVRQRTLELDAKNREL 392 Query: 287 --FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + D LT L NRR L + E A+R GTP SV++ID+D FK++NDT+ Sbjct: 393 DAKNQALAVLSLTDRLTGLCNRRRLDQVLSGEWRRAHRYGTPFSVIMIDLDNFKDVNDTF 452 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH GD +L +V+ VR +D V R+GG+EF++V E + + AE +R ++ T Sbjct: 453 GHAVGDAVLLRVADILLAVVRETDVVGRFGGEEFLLVCPETTVEDARVLAEALRRELQDT 512 Query: 405 KLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 ++ S G A + P L+ AD+ALY AK+ GRN+V + + Sbjct: 513 DFPIVG----RITASFGLADYEADPGPAALVARADKALYRAKQSGRNQVIVAPTT 563 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 64/168 (38%), Positives = 94/168 (55%), Gaps = 4/168 (2%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E R+ D LT L N+ + +REI A R PLS++I D+D FK+INDT+GH Sbjct: 299 EKFRYLSETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKINDTYGHKV 358 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GDE+L+ +++ N+R +D+ R+GG+EF+I+ E + + AE++R VE K Sbjct: 359 GDEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAVETYKFPT 418 Query: 409 ANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 +++S+G A E I AD ALY AK GRNRVE+ Sbjct: 419 VG----KVTISLGVAQLEPDEKPEDFIVRADMALYKAKEGGRNRVEIA 462 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 121/281 (43%), Gaps = 25/281 (8%) Query: 185 QIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQD 244 + SW + ++ IL+ + LP + + + + Sbjct: 321 ARFYLYSWSLFMLGAILVALNKFDVLP--------------SNMITEYSMLFGTGVGTVV 366 Query: 245 FDGIFNQTMRNTRNLNNRSLRVKFLLQ------IRNTVSQIITLLRELFEEVSRHEVGMD 298 + + +N + +Q + V + + LRE E D Sbjct: 367 LSAALAVRLNDEKNKRYHAQAEALRVQRESVELLEERVKERTSALRE-ANEKLEKLSNTD 425 Query: 299 VLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQ 358 LT L NRR L + E+ RTG PLS +++D+D+FK NDT GH GD L+ V+ Sbjct: 426 SLTGLNNRRSLDELLAMEVKRTCRTGAPLSAMMMDIDRFKAFNDTHGHQVGDACLKAVAG 485 Query: 359 AFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 R SD V RYGG+EF ++L + + AERIR+ VE +G+ + ++ Sbjct: 486 VIASTAQRPSDVVGRYGGEEFCVLLPDTPLDGAQIIAERIRAAVENLDF-TVSGQRVPVT 544 Query: 418 LSIGAAM--FNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 +SIG + + + L++ ADEALY AK GRN V L Sbjct: 545 ISIGVSELTYCASDSGKALVEAADEALYSAKSAGRNCVRLA 585 >UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPE0_9GAMM Length = 424 Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 26/347 (7%) Query: 130 AAEKLQVYHFSINSIDIAMEVMT---RAFTFSDSSASKEDENYRIFSLLENAEEEKERQI 186 A F I+ + T R++ + + SL ++ +E+ R Sbjct: 80 RAALSAGETFDGEVINYRKDGSTYVVRSYISPVYAEEAPERVTHYVSLQQDVTDERARDE 139 Query: 187 A-SILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDF 245 +LS +++ +L +D ++ A F + R F Sbjct: 140 QLRLLSTAVEVSGDPVLITDPEGTITYVNAAFEELMGYSRSEVLGENPRRFKSGRQDDAF 199 Query: 246 DGIFNQTMRNTRNLNNR---SLRVKFLLQIRNTVSQIIT---------------LLRELF 287 + + + R L+ + T++ ++ R Sbjct: 200 YQGMWRALERGESFRGEFLNRRRDGSLIHLEQTITPVLDDHGKISHYVALGKDVTDRLRM 259 Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 E+ R D LT + NR L + EI + R G PLS+++ D+D FK +ND +GH Sbjct: 260 EDEIRRVAHTDWLTGVANRLSLGNTLEAEIERSQRYGRPLSLIMFDLDHFKAVNDQYGHE 319 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GDE+L+ ++Q +R +D + R+GG+EFIIV+ E AE++R V + Sbjct: 320 AGDEVLKALAQTVSAELRDADTLGRWGGEEFIIVVPETRLVGATALAEKLRQAVSTMSVP 379 Query: 408 AANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 G ++ S G A + L + ADEA+Y AK+ GR+RV Sbjct: 380 GVPG----VTASFGVAELASGDSAKLLARRADEAMYQAKQAGRDRVV 422 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 277 bits (708), Expect = 8e-73, Method: Composition-based stats. Identities = 80/269 (29%), Positives = 121/269 (44%), Gaps = 9/269 (3%) Query: 197 IYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNT 256 Y + L L L+ + G W + A V + ++ F + M Sbjct: 291 FYVLAWTPLLLGHLVLAVSKLG-WIPRSPFTELAPQAGV-AVEVILLSFALAYRINMERR 348 Query: 257 RNLNNRSLRVKFLLQIRNTVSQIITLLRELFE---EVSRHEVGMDVLTKLLNRRFLPTIF 313 R + + Q T+ + E E E R D LT + NRR Sbjct: 349 RRQQAQEHALDIQRQANLTLESRVRERTEELEQANEQLRAISLTDGLTHVANRRRFDEKL 408 Query: 314 KREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV-RSSDYVFR 372 + E A R LS++++D+D FK++ND +GH GD+ L ++ D V RS D V R Sbjct: 409 ETEWNRALRHEHELSLILLDIDHFKQVNDRFGHLVGDDCLVALASILSDEVQRSGDLVAR 468 Query: 373 YGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG-EDIALSLSIGAAMFNGH--P 429 YGG+EF I+L + AER+R V +T + + ++L++S+G A + Sbjct: 469 YGGEEFAILLPTTDVAGAQQVAERMRLSVARTPVNSGEHMSPVSLTISLGVATLTPNRQS 528 Query: 430 DYERLIQIADEALYIAKRRGRNRVELWKA 458 D + LI+ ADEALY AK GRNRV +W Sbjct: 529 DCQELIRRADEALYAAKSDGRNRVVVWHP 557 >UniRef50_B6AS70 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AS70_9BACT Length = 720 Score = 277 bits (708), Expect = 8e-73, Method: Composition-based stats. Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 26/362 (7%) Query: 98 HAR-IGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFT 156 HAR + I ++++ RVL +I+ + + E ++ + + EV + AFT Sbjct: 114 HARQLVIEKDLLDRQSRVLSRIILSSEKVARW--KEFIRGILRELQEM-FPFEVFSIAFT 170 Query: 157 FSDSSASKEDENYRIFSLLENAEEE--KERQIASILSWEIDIIYKILLDSDLGSSLPLSQ 214 ED++ ++ + + +ER L + D L + Sbjct: 171 --------EDQSLTLYLYYRSTPQRDSQERFREYFLEYFRDRFG-------LSRETSVEV 215 Query: 215 ADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRV--KFLLQI 272 +F L G F + + D GI TR L + V L + Sbjct: 216 EEFFLSEEPDGFPGFDLKTLMVTVPDYAADLSGILGIAYGVTRELTPQEQSVIQSILSVM 275 Query: 273 RNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLII 332 + I + R L E + D LT L NRR+ + EI + R G +L+I Sbjct: 276 VMVIGSIKVISRTLSE--LEYYSTHDPLTGLHNRRYFNEMIGYEIQRSERHGHKFCLLMI 333 Query: 333 DVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLR 392 D+D FK++ND++GH GD +L ++ + VR D V R+GGDEF+++L+E S + Sbjct: 334 DLDNFKDVNDSYGHLDGDRVLNQLGKIVTGTVRKGDIVCRFGGDEFVVLLSETSLSGGCT 393 Query: 393 TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRN 451 AE +R ++ + +++S+G + + E L+ D LY AK RGRN Sbjct: 394 LAETVREAIQTWSFGTTDRGSFHVTVSVGIVAYPQDGNQIEDLLAGLDLVLYRAKERGRN 453 Query: 452 RV 453 V Sbjct: 454 TV 455 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 4/229 (1%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE 289 G+ + + + + + I ++ + + R++ + + I R+ EE Sbjct: 440 KGLCLITAVGQEMDWAERILHRMDGSQLPVLKIVKRLRTKSGEKLIETFIDLTERKKLEE 499 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 D LT+ NRR+ + +REI A RT P +++++D+D FK +ND +GH G Sbjct: 500 QLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKNVNDRFGHAAG 559 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +L+ ++ + +R +D + R+GG+EF+I+L + AE +R ++ ++ Sbjct: 560 DLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELREQLSMLEIPGV 619 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 ++ S G + + L+ AD+ LY AK GRN V + Sbjct: 620 G----RVTASFGVTGYCPGDTLDTLLMRADQMLYTAKASGRNCVRFSEK 664 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 65/229 (28%), Positives = 119/229 (51%), Gaps = 14/229 (6%) Query: 237 HISRLIQDFDGIFNQTMRNTRNLNNRSL------RVKFLLQIRNT----VSQIITLLREL 286 H+ +I+ ++ LN ++ + F+ + N + + + Sbjct: 547 HVKDIIKALTNKTPIILQEFHILNKKNQTLYVKGSLNFIKDVENKPVAVFTFVDITKEKE 606 Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 ++ + D LT + NRR+L + + A R PLS+++ D+D FK IND++GH Sbjct: 607 LSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGH 666 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 + GD++L+ +++ +N+R++D RYGG+EF+I+ E ++ + AE++RS + Sbjct: 667 DVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNLHF 726 Query: 407 KAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + E I ++ S G A H E L++ ADEALY AK+ GRN+V + Sbjct: 727 E----EGINVTCSFGVASLEKHDTKETLLKRADEALYEAKKTGRNKVVV 771 >UniRef50_C7LVW7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW7_DESBD Length = 572 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 89/353 (25%), Positives = 144/353 (40%), Gaps = 32/353 (9%) Query: 120 YPVIFSSDYSAAEKLQVYHF--------SINSIDIAMEVMTRAFTFSDS---SASKEDEN 168 Y F + ++ V ++ ++ A ++ T A D SA + E Sbjct: 225 YEAWFDTKWADRRCYAVTYYPYRERDDSISGAVVTATDI-TEAKRMQDEIANSARRLAEA 283 Query: 169 YRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNH----- 223 R+ + EK+ SW + + D DF L+ +H Sbjct: 284 QRLAKVG---SFEKDYLHGK-KSWSDEFCRILGYPPDAVDP------DFNLFMHHIHPDD 333 Query: 224 --KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 R F GH + + + L + ++ ++ + Sbjct: 334 EPAFRENFEAAQATGHEFTTELRIRTVQGEERHVSLVCGFDLLEDGSMFRLHGAMADVTE 393 Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 R L E D LT L NRR + E+ + R G L V ++D+D FK++N Sbjct: 394 --RRLAELRLERLANTDELTGLPNRRHFLECVRAEMTRSRRFGKSLCVAMVDIDDFKKVN 451 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 DT GH GD LR V+Q R+ D V R GG+EF ++ EA + AER+R + Sbjct: 452 DTHGHGVGDLALRHVAQTINGLRRAVDVVGRLGGEEFCVLFPEAGLAAGITAAERVRKAL 511 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + L+ + + L++SIG A ++G + L++ +DEALY AKR G+NRV Sbjct: 512 AEAVLEHGD-LRLRLTVSIGLAEYSGDESLDGLLRRSDEALYEAKRTGKNRVC 563 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 64/175 (36%), Positives = 104/175 (59%), Gaps = 1/175 (0%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ EE + + +D LT + NRR+ ++EI +R TPLS ++D+D FK++ND Sbjct: 415 ERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFMLDIDLFKQVND 474 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 T+GH +GD +L++++ + +R D + R GG+EF I+L E + + AER+RS + Sbjct: 475 TYGHKSGDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAAEVAERLRSVLA 534 Query: 403 KTKLKAANGEDIALSLSIGAAM-FNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 K+ G I ++SIG A + + + L+ +ADEALY AK+ GRNRV + Sbjct: 535 DEKVPTEAGAPIQFTVSIGVASRVSSQDNIDMLLNLADEALYQAKKYGRNRVYIA 589 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 4/209 (1%) Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 + + L +R+ V Q++ + + D LT L NR Sbjct: 517 RLLGIIITLQLALTALFYFFGRERGVRDRVQQLLRSELQERAAALARQATTDPLTGLHNR 576 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 +E+A RTG PLS+++ DVD FKE+ND +GH TGD++L ++SQ +R Sbjct: 577 LRFNEGLAQELARVRRTGQPLSLVMFDVDHFKEVNDRYGHPTGDQVLIRLSQTAAAQLRQ 636 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 +D + R+GG+EF I+L +A + + AE +R V +T + +++ S G A Sbjct: 637 TDLLARWGGEEFAILLVDADLHAAVEVAENLRRLVARTPF----DQIGSVTASFGVAECR 692 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRVEL 455 + L++ AD ALY AK GRNRVE+ Sbjct: 693 PDESADSLLERADAALYRAKSNGRNRVEI 721 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 103/169 (60%), Gaps = 1/169 (0%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 ++E +D LT + NRR+L T + E+ + R G PLS++++D+D FKEINDT G Sbjct: 130 IYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDIDHFKEINDTHG 189 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD LRK+S+ + VR+SD + RYGG+EF +L E S + L AER R++V ++ Sbjct: 190 HICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLAERCRTQVAASQ 249 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + + +++SIG + + +I+ AD+ALY AKR GRNRV Sbjct: 250 FSCTDHQS-RVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNRVC 297 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 3/192 (1%) Query: 270 LQIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 Q+ V++ ++L E ++ D LT L NRR+L F +EI A R + Sbjct: 774 QQLAKAVAEQVSLAIANIKLRERLENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSI 833 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 V++ D+D FK+ ND GH+ GD +L+ + + N+R SD RYGG+E IVL + S Sbjct: 834 GVIMGDIDHFKQFNDQLGHDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSL 893 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAK 446 +TL AE +R + +++ E L++S+G A + H +IQ AD ALY AK Sbjct: 894 EDTLVKAESLRQAIASMEVEYKGKELGTLTVSLGVACYPNHGETMVNIIQAADRALYQAK 953 Query: 447 RRGRNRVELWKA 458 GRNRV + Sbjct: 954 AAGRNRVVMADE 965 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 69/176 (39%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 T +E R D LT L NRR + E+ R GTPL+++ IDVD+FK + Sbjct: 536 TTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRV 595 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 NDTWGH GDE+LR ++ VR D V R GG+EF ++L + + E + AER+R+ Sbjct: 596 NDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAG 655 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 VE L G + ++LS+G + + L++ AD ALY AK GRNRVE Sbjct: 656 VEAAPLLTTAG-PLTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNRVERA 710 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 14/271 (5%) Query: 189 ILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGI 248 + + EI+IIYK + + + + L F+ + + ++ D G+ Sbjct: 638 LENLEIEIIYKNKYFDTMIKNQGIKTFEDFLIFDDDKKELMKRY-----LRKITADEGGV 692 Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVS-----RHEVGMDVLTKL 303 F + N L++ +N + I+ +L+++ EE D LT + Sbjct: 693 FTINDIIMKQDKNIVLKLNMNRINQNHETLILCILQDITEESMIIKYFEELSIKDDLTGI 752 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 NRR L + + A R PLSV++ D+D FK IND++GH+ GD++L+ ++ N Sbjct: 753 CNRRCLEDKLEEYLTLAKRYNRPLSVIMFDIDFFKHINDSYGHDIGDKVLKTIANIVLSN 812 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 +R++D + RYGG+EF+I+ E + + AE++R +E + E +++ S G Sbjct: 813 IRATDILARYGGEEFVIISPETTLEDAKALAEKLRKEIENFLFE----EGFSITCSFGVT 868 Query: 424 MFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 N E +++ DEALY AKR GRNRV Sbjct: 869 SLNQEDTKETILKRVDEALYKAKREGRNRVV 899 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 2/236 (0%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 + H S + + + ++ L + + L + +L Sbjct: 1107 RCPHIHSDSSPLESFCVPMMAQGKALGILYISSPQLGQLTEAKQRLALTVAEHLAL-SLA 1165 Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 E + D LT L NRR++ +REI A R P+ ++++D+D FK NDT Sbjct: 1166 NLKLRETLSQQSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGIIMLDIDHFKHFNDT 1225 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GD +LR++ ++R+SD RYGG+E +++L +AS +T + AE+IR V+ Sbjct: 1226 FGHEAGDAVLRELGIFLQRSIRASDIACRYGGEELMLILPDASLADTKQRAEQIRHDVKG 1285 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKA 458 +++ + A+++S+G A F H + LI AD ALY AK +GR+RV + Sbjct: 1286 LQIEYHHKLLDAIAISVGVAAFAEHGSTAQELIAAADRALYQAKAQGRDRVVTASS 1341 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 95/478 (19%), Positives = 179/478 (37%), Gaps = 45/478 (9%) Query: 4 YFKRMKDEWTGLVEQADPPI--------RAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEF 55 F+R+ + LVE P+ +I +EFY+ + D E + Sbjct: 235 CFQRLANGEEKLVEIYSSPVDYQGKTLMHLIVFDITEQWKAKRELEFYKNLFEDSLNEIY 294 Query: 56 LSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVL 115 + Q + + A+ R L ++++ + + + E F+ L Sbjct: 295 IFYPQTLKFI--AVNRGARENLGYTGEELKEMTP-----------VDLKPEFTLQSFKEL 341 Query: 116 -----KKILYPVIFSSDYSAAEK--------LQVYHFSINSIDIAMEV-MTRAFTFSDSS 161 K +IF + + + L++ F + +A+ + +T Sbjct: 342 LEPLLKGEQKQLIFDAMHRRKDGSLYPVEIHLELVEFDKEKVFVALVIDITERREMEKEL 401 Query: 162 ASKEDENYRIFSLLENAEEEKERQIASILSW---EIDIIYKILLDSDLGSSLPLSQADFG 218 + + I +A + + W I+ + D Sbjct: 402 KERNEILSTIMEYAGDAIIMID-DNGKVTFWNPAAERILGYSKEEIIGKDLHMFMIQDMR 460 Query: 219 LWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQ 278 L+ ++ + G + + L+ ++R+K + Sbjct: 461 LYEAYREAFKKFRLTGKGSVVGKTVEMKTRHKNGHEIDVELSLSAVRIKDSWHAIGIIRD 520 Query: 279 IITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 I R+ FEE+ + D LT + NRRF + ++EI R S+++ D+D FK Sbjct: 521 ISE--RKRFEELLYRQSITDPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFK 578 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 +ND +GH GD +L+ V+ +R +DY R+GG+EFII+L E S N AE +R Sbjct: 579 NVNDRFGHAAGDMVLKSVADTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAEELR 638 Query: 399 SRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 ++ +T+L ++ S G + + ++ D ALY AK GRN V++ Sbjct: 639 KKISETELDGIG----KVTASFGVTEYRNTDTVDTVLLRVDGALYEAKGSGRNCVKIA 692 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 8/190 (4%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 + L+ + T+S I+ +++E F + +D LT + N+ + + E+ + R G Sbjct: 317 INLLVGLLLTMSFILGVIKERF----KAMAEIDTLTGIYNKGKFNHLLQVELDRSKRYGR 372 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 PLS++I D+D FK+IND +GH GD +L+ +++ N+RS+D+ R+GG+EF+I+ E Sbjct: 373 PLSLIIFDIDHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTDFFARWGGEEFVILAPET 432 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIA 445 AE+IR +E+ + ++ S G + + ++ AD ALY A Sbjct: 433 DLEGAQILAEKIRKAIEEYPFETVG----KVTSSFGVTEAFENDTVDSFVKRADVALYKA 488 Query: 446 KRRGRNRVEL 455 K +GRNRVE+ Sbjct: 489 KDKGRNRVEI 498 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 2/192 (1%) Query: 264 LRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRT 323 L ++ + S I R+ E R D LT++ NRR L EI+ R+ Sbjct: 192 LSTPYIGLLVAMNSSAIRRWRQR-ESEVRQLSTTDPLTQVANRRHLLERLNLEISRCERS 250 Query: 324 GTP-LSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 G LS+L++D+D FK IND GH GDE LR ++ + R++D V RYGG+EF ++L Sbjct: 251 GHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTARVLREQSRNTDLVGRYGGEEFCLLL 310 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 + L+ AER R +E+ + +GE + ++ SIG A + E L+ ADEAL Sbjct: 311 PDTGPQGALQIAERCRQALEQADIDREDGEVLHITTSIGLATYQMGDTNESLLHRADEAL 370 Query: 443 YIAKRRGRNRVE 454 Y AK +GRNR+ Sbjct: 371 YQAKEQGRNRIV 382 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 9/259 (3%) Query: 201 LLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLN 260 L L S L L+ F W + H F E+ H + D + + + Sbjct: 81 WLSRKLSSVLQLNTPSFCSW--QQRHHLF----ELPHTRPITTDSEFMAQNCTFLPIETD 134 Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 + L++ L++ E++ +D LT++ NRR ++E A A Sbjct: 135 VNGKHICILIEDVTDACHYQMQLQKTLAEIA-QISRIDGLTQVYNRRHWQDSLEQEYAKA 193 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 R LS++++D+D FK +ND +GH GD +L +VS +R D RYGG+EF I Sbjct: 194 RRHDKKLSLIMLDLDHFKLLNDNYGHQGGDMVLIEVSALISTLLRVEDTFGRYGGEEFAI 253 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQIAD 439 +L E + A+RI + T + + I +++S+G A + YE LI AD Sbjct: 254 ILPETDSAGAIELAQRICRIIATTPFTYND-QVIKVTVSLGVAQLSSKESNYEELITQAD 312 Query: 440 EALYIAKRRGRNRVELWKA 458 ALY AK +GRN+V Sbjct: 313 SALYQAKSQGRNQVCNAAE 331 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 3/201 (1%) Query: 260 NNRSLRVKFLLQIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREI 317 ++ + Q+ TV++ + L E ++ D LT L NRR+L +REI Sbjct: 804 DSPDQLCESKRQLARTVAEQMALAIANLQLREELQNRSIRDPLTGLFNRRYLEESLEREI 863 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 A R + V++ID+D FK NDT+GH+ GD +L++V + ++R+SD RYGG+E Sbjct: 864 NRACRNDHNVGVIMIDIDHFKRFNDTFGHDGGDAVLKEVGKLLKSSLRASDIACRYGGEE 923 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQ 436 ++L EAS T + AE++R +++ ++ ++ S+G A F H + ++Q Sbjct: 924 MTLILPEASIENTYKRAEQVRKLIKQINIEHKRQSLGTITASLGVACFPEHGMTGDAVVQ 983 Query: 437 IADEALYIAKRRGRNRVELWK 457 AD ALY AK+ GR+RV + Sbjct: 984 RADTALYQAKKEGRDRVVGAE 1004 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 121/233 (51%), Gaps = 1/233 (0%) Query: 222 NHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 + + + I+ + + D F R++ + L V +L + ++ Sbjct: 239 GERLFASLERVGDTSMIAAVSINEDNFFADWRRHSLLMGGFGLVVGAILFTLSILTVRSQ 298 Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 + ++ + + D LT + NRR+ EI RTGTPLSV+++D+D FK++N Sbjct: 299 QEQFRIQQQLQQQATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVN 358 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 DT+GH+ GD++L +V+Q + R SD V R+GG+EF+I+L + N AE+IR + Sbjct: 359 DTYGHHVGDQVLMEVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAI 418 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 E A G +++++ S G + + G +R++ AD ALY AK GRN V Sbjct: 419 EDLSFPTAEG-NVSVTASFGVSQWQGETKIDRVVSRADAALYQAKHDGRNCVR 470 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 75/249 (30%), Positives = 117/249 (46%), Gaps = 14/249 (5%) Query: 208 SSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVK 267 + L F H+ F + G L+Q + L + + Sbjct: 67 AVLSFGNFAFFSQKLHRYLFPFKPDSYFGCHFDLMQQSCTM--------GPLRDEDNAIT 118 Query: 268 FLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 L I V+++ T +E+ +D LT + NRRFL + K E R P Sbjct: 119 SLFLIVQDVTELAT-----YEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPF 173 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 S+++ID+D FK++NDT GH GD +L+ V+ +R SD++ RYGG+EF +L E Sbjct: 174 SLMMIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDC 233 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKR 447 + AE +R+ +E + + I +++S+G A F E L++ ADEALY AKR Sbjct: 234 DAAETVAEHLRAHIENME-HLFQKKVIRVTISLGIACFAPDDSPETLVKRADEALYQAKR 292 Query: 448 RGRNRVELW 456 GRNR + Sbjct: 293 SGRNRFVRF 301 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 87/348 (25%), Positives = 140/348 (40%), Gaps = 28/348 (8%) Query: 130 AAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRI---FSLLENAEEEKE-RQ 185 F ++I+ + R + + D++ RI S+ + E+E Q Sbjct: 75 RQRLAAGQGFEGSAINYRKDG--RPYHVEWLISPVRDDSGRITAWLSIQRDVTHERELEQ 132 Query: 186 IASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDF 245 A +LS ++ +L +D + F ++ V + F Sbjct: 133 EARLLSTAVESSAASILITDTEGCIVYVNRGFEQITGYRRDEVLGETPAVLNSGEQSARF 192 Query: 246 DGIF------NQTMRNTRNLNNRSLRVKFLLQ----IRNTVSQIIT--------LLRELF 287 +T R T NRS + +L Q +R Q++ R Sbjct: 193 YRDLWTTLERGETFRGTFLNRNRSGALFYLEQSITPVRADQGQVVRYVATGKDITERVRM 252 Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 EE + D LT L NR + +R+ R G LS+L+ D+D FK +ND GH Sbjct: 253 EEELKRAATTDALTGLANRLSFEQLLERDYERCRRYGGALSLLMFDLDHFKAVNDAHGHE 312 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GD +L+ ++ NVR++D V R+GG+EF+++L E AE++R RV + Sbjct: 313 AGDAVLQALAGLVLANVRTADTVARWGGEEFMVLLPETPLAAAGELAEKLRERVAAHRFP 372 Query: 408 AANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++ S G L++ ADEALY AK GR+RVE Sbjct: 373 HGA----PVTASFGVCALRDDDTCRTLVRRADEALYRAKHLGRDRVEC 416 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 99/189 (52%), Gaps = 3/189 (1%) Query: 270 LQIRNTVSQII--TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 Q+ +TV++ I + H+ D LT L NRR+L +EIA A R P+ Sbjct: 1190 QQLAHTVAEQIGMAIANLNLRATLEHQSIRDPLTGLFNRRYLEEYLSQEIARAQRQKHPI 1249 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 V+++D+D FK NDT+GH+ GD +L+KV + VR D RYGG+E ++L +S Sbjct: 1250 GVIMMDIDNFKHFNDTFGHDAGDYVLQKVGELLKQKVREYDVACRYGGEEMTLILPGSSL 1309 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAK 446 T AE+IR + + + +++ S G A F H LIQ AD ALY AK Sbjct: 1310 ENTSMRAEQIREAIASLVVASGGQHLGSITASFGVAAFPKHGSIGIDLIQAADAALYRAK 1369 Query: 447 RRGRNRVEL 455 GRNRV + Sbjct: 1370 ADGRNRVVI 1378 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 119/204 (58%), Gaps = 3/204 (1%) Query: 260 NNRSLRVKFLLQIRNTVSQIITL--LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREI 317 + + Q+ VS+ I+L + E + + D LT L NRR++ KREI Sbjct: 874 SEPDKLSEVKQQLARAVSEHISLALVNLQLRESLKAQSIKDSLTDLYNRRYMEESLKREI 933 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 + A R + +++IDVD FKE NDT+GH GD +L++VS NVRS D RYGG+E Sbjct: 934 SLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVSNFLMINVRSGDIACRYGGEE 993 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD-YERLIQ 436 F+++L EAS ++ + AE+IR +++ K + ++++S+G A F H ++LIQ Sbjct: 994 FLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSFRSVTVSVGVASFPDHGTNNDQLIQ 1053 Query: 437 IADEALYIAKRRGRNRVELWKASL 460 AD ALY AK++GR+RV ++ + Sbjct: 1054 AADTALYQAKKQGRDRVVVFSPFM 1077 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 3/197 (1%) Query: 267 KFLLQIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 Q+ TV++ + L E + D LTKL NRR+L +E+A A R Sbjct: 570 DIRQQLAKTVAEQLALAIANLKLREQLEEQSLRDPLTKLFNRRYLEQRLSQELARAKRHH 629 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 + VL+IDVD FK ND+ GH+ GD IL + +N+R+SD RYGG+E I+L + Sbjct: 630 YSVGVLMIDVDHFKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPD 689 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALY 443 A+ E + AE +R + + K++ + +++ S G A + H + +IQIAD+ALY Sbjct: 690 ATLEEASQKAEFLRQAIAEMKIEYSGKIVNSVTASFGVACYPDHGETGQEIIQIADKALY 749 Query: 444 IAKRRGRNRVELWKASL 460 AK+ GRNRV + + Sbjct: 750 DAKQAGRNRVIVAPKEV 766 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 12/261 (4%) Query: 201 LLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLN 260 + S L + F W F V I+ + I L Sbjct: 68 WFRQKVQSVFVLHNSAFTTWEQRPYLFKFKNYRPVTGIADFMYQNSTII--------PLK 119 Query: 261 NRSLRVKFLLQIRNTVSQI--ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIA 318 + +V+ + I V+++ L + D LT LLNR+ ++E Sbjct: 120 DTRGKVEHICLIVYDVTEVAVNRLQIQAANLQLHEISRTDGLTGLLNRKTWELDAEQEYK 179 Query: 319 HANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEF 378 R P S+++ D+D FK IND++GH GDE++R+ + A +R D RYGG+EF Sbjct: 180 RFKRHEHPCSLVMFDIDHFKNINDSYGHPAGDEVIRQTAAAVKSCIRDIDIAGRYGGEEF 239 Query: 379 IIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQI 437 IVL++ L AERIR+++++ + + I ++S+G A I Sbjct: 240 TIVLSDTDTEGALVVAERIRNQIQELTVHYED-FAIQFTVSLGVAQLTQQMTNRTAWIDC 298 Query: 438 ADEALYIAKRRGRNRVELWKA 458 AD+ALY AK+ GRN ++ Sbjct: 299 ADKALYQAKKNGRNNSVVYTP 319 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 73/241 (30%), Positives = 114/241 (47%), Gaps = 2/241 (0%) Query: 220 WFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 +G H A + + + + R + L Q + + Sbjct: 392 ALGEEGLHCRHSSASHSTLCVPMLAQGETVGLLHLEAGSAAPLTRRQERLAQTVAETAAL 451 Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 ++ E R + D LT L NRR+L F+RE+ A R+ P++V+++D+D FK Sbjct: 452 -AIVNLRLRESLRQQSIRDPLTGLYNRRYLEESFERELHRAQRSDDPIAVIMLDIDHFKH 510 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 ND+ GH GDE+LR + Q +R+ D RYGG+EF +V + ++ R A+++R Sbjct: 511 FNDSHGHEAGDELLRALGQLLSGCIRAEDVACRYGGEEFAMVFPGMTLDQATRWADQLRH 570 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKA 458 VE T+ + +S+S+G A F H LI+ AD ALY AKR GRNRV Sbjct: 571 TVESTQFASRGEALEQVSVSLGVAAFPQHGRHLADLIRAADAALYRAKREGRNRVITADG 630 Query: 459 S 459 + Sbjct: 631 A 631 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 11/259 (4%) Query: 201 LLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLN 260 +G + L F +W +F+ + + + + Sbjct: 67 WFTRKVGRVVALGTPAFTIWKQRPYLVHFNNYQPITGQGEFMYQNTTLL------PLRSS 120 Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 N + L+ T I +L + + +H D LT+L NR + E + Sbjct: 121 NSEIHHVCLVIYDLTDVAINSLALQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYS-- 178 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 R G+ +++L++D+D FK IND GH GD ++++VS+ + +VR SD RYGG+EF I Sbjct: 179 -RHGSSIALLMLDIDHFKSINDRHGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAI 237 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN-GHPDYERLIQIAD 439 +L AER+R VE+ ++ NG+ IA ++S+G A + D+ LI+ AD Sbjct: 238 LLPHTDLAGARTLAERLRQSVEEQEVIH-NGQAIAFTISLGIACLDRPARDHRCLIEWAD 296 Query: 440 EALYIAKRRGRNRVELWKA 458 +ALY +KR GRNRV + Sbjct: 297 QALYASKRAGRNRVSTYAP 315 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 5/209 (2%) Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLR-ELFEEVSRHEVGMDVLTKLLN 305 G+ R + R ++ R+ Q L E E+ + D LT + N Sbjct: 223 GLLMPISFACRAVFKNETRDGAVIAFRDITVQKKNLQSLEGINELLEKQASTDALTGIFN 282 Query: 306 RRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVR 365 R EI A R LS+++ D+D FK++ND++GH +GD +L+ +++ N+R Sbjct: 283 RMKFNQTLTSEIKRAKRYRVALSLILFDIDHFKQVNDSYGHLSGDTVLKHLARLVASNLR 342 Query: 366 SSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF 425 D R+GG+EF+I E S ++ AE++RS++E A +++S G A F Sbjct: 343 EIDIFARWGGEEFVIQAPETSLESAIKLAEKLRSKIENYVFPAPK----KITVSFGVATF 398 Query: 426 NGHPDYERLIQIADEALYIAKRRGRNRVE 454 + L+ ADEALY AK GRN+V Sbjct: 399 RSSDNDITLVNRADEALYRAKEGGRNQVV 427 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 75/228 (32%), Positives = 129/228 (56%), Gaps = 4/228 (1%) Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRE--LFEE 289 + V LI+ F+ T+ + N RV+ L+++ T Q+ L++E Sbjct: 88 MRTVREQEYLIEAFEKGAADTITHPFNPAEILARVRTHLELKQTQKQLNRLVKEHEKLAN 147 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 + R D LT L NRR T+ +E A+R +S+L+ID+D FK+IND +GH G Sbjct: 148 LLRKLAITDPLTGLWNRRHFLTVAYQEFNRASRYKRFMSILMIDIDHFKQINDEYGHTMG 207 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 DE+L+ V+++ ++R +DY R+GG+EF+ +L E + +R AER+R R+E+ + Sbjct: 208 DEVLKGVAKSIVGSLREADYCGRFGGEEFVTLLPETDSSGAVRVAERLRKRMEQITIGIG 267 Query: 410 NGEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVELW 456 + + + +++++G A + + E +IQ A++ALY AK +G NRV L Sbjct: 268 D-KQVQMTVTVGVASYQLDDANIEVIIQRANKALYHAKSQGYNRVALH 314 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 107/201 (53%), Gaps = 3/201 (1%) Query: 260 NNRSLRVKFLLQIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREI 317 NN + LQI TV++ + L E +++ D LT L NRR+L + +EI Sbjct: 1413 NNSTALPDAKLQIARTVAEQVALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEI 1472 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 A R P+SV++IDVD FK NDT+GH+ GD +L+ + + VR SD RYGG+E Sbjct: 1473 ARGQRRQHPISVVMIDVDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEE 1532 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQ 436 ++L E+S ET AE IR + + L L++S+G A F H LIQ Sbjct: 1533 MTLILPESSLEETTIKAEEIREAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGIALIQ 1592 Query: 437 IADEALYIAKRRGRNRVELWK 457 AD ALY AK GRN+V + Sbjct: 1593 AADAALYRAKAAGRNQVVVAP 1613 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 77/225 (34%), Positives = 123/225 (54%), Gaps = 7/225 (3%) Query: 235 VGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRE--LFEEVSR 292 +S + D DG+ + TRN++ R +R T Q+ + E + + Sbjct: 416 TEVVSSYLLDADGVAQTILGITRNVSE---RKAVESALRETNRQLHARIEEIGRLQVALQ 472 Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 D LT L NRR+L +RE++ A R G PLS++++D+D FK++NDT+GH GDE+ Sbjct: 473 ELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDHFKQVNDTYGHQVGDEV 532 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE 412 LR ++ ++R+ D RYGG+EF+I+L T+ A+ RS VE +K N + Sbjct: 533 LRILASTLSADIRAEDVACRYGGEEFLILLPNMPLETTMLRAQGWRSAVEALSVKHGNFQ 592 Query: 413 DIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELW 456 I ++S+G A + H + L + AD+ALY AK GRN+V ++ Sbjct: 593 -ITFTISLGVAAYPEHGKTPDDLTRCADQALYRAKNEGRNQVSVF 636 >UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTU0_9FIRM Length = 491 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 116/230 (50%), Gaps = 6/230 (2%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE 289 G++EV + + G+ + + L + L L + + +S I + Sbjct: 260 DGVSEVAVPLIVNNEIIGVLDVETNQAKRLQDYDL--DLLRSLASQISMTIAHANHVSRV 317 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 + D LT L N R+ T+F+RE A R PLS+L+ID+D FK NDT+GH G Sbjct: 318 EL--QAITDGLTGLYNYRYFQTLFEREFKRAVRYKRPLSLLMIDIDYFKLYNDTYGHRQG 375 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D I+R +++ N R D V RYGG+EF ++ E + +E + AERIR V + Sbjct: 376 DHIIRTIAKIIRQNCRDVDIVVRYGGEEFAVLFPETTVDEAFKIAERIRMAVAEYPFANK 435 Query: 410 NGEDIAL-SLSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRNRVELWK 457 + + + ++S+G A + E LI AD ALY AKR +NRV L++ Sbjct: 436 HSQPGGILTVSMGVAGYPYDAQSETELIDHADMALYRAKRTSKNRVCLYR 485 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 1/191 (0%) Query: 267 KFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTP 326 IR R+L E + +D LT+L NR ++E++ + R Sbjct: 357 ALHQPIRMIGVHANIHSRKLLELELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKD 416 Query: 327 LSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEAS 386 +++ ++D+D FK+IND+ GH GD +L+K++ +R D + R GG+EF I+L E + Sbjct: 417 MAMFMMDIDFFKKINDSHGHKIGDIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETN 476 Query: 387 ENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIA 445 E L AER+R V +K+ +G + ++SIG + + + + L+ AD+ALY A Sbjct: 477 RAEALEVAERLRLAVADSKVPMKDGLPVQYTVSIGVSSVASADDNIDMLLSRADQALYQA 536 Query: 446 KRRGRNRVELW 456 K+ GRNRV Sbjct: 537 KQSGRNRVCAA 547 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 86/320 (26%), Positives = 134/320 (41%), Gaps = 25/320 (7%) Query: 144 IDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLD 203 A MT A + + + + YR+ + E + L E +Y Sbjct: 105 FSTAFNEMTEALARARAELQRSEARYRLLA-------EHVADVIVTLDGEGRFLYVSPSA 157 Query: 204 SDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDF----DGIFNQTMRNTRNL 259 L P + + AE +++ DG NT L Sbjct: 158 QALLGYAPD-------ELAGRPLCDITPSAEAPRPGTVVELTVRCRDGTTRWAEVNTAAL 210 Query: 260 NNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAH 319 + L+ + +S R+ E +H D LT NRR + +E+ Sbjct: 211 PPGAGDGAVLVCVFRDISA-----RKRLESDLKHLATTDGLTGAYNRRSFVEVCGQELQR 265 Query: 320 ANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFI 379 A+R P S+L++D+D FK +ND +GH GDE+LR++ + +RS D V R GGDEF Sbjct: 266 ADRRARPTSLLLMDIDHFKRLNDRFGHAAGDEVLRQIVETGRRVLRSEDVVGRIGGDEFA 325 Query: 380 IVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIA 438 ++L + + R AE++R+ E+ + A G ++S G A + H E L+Q A Sbjct: 326 VLLPATTLEQAGRVAEQLRTTYERLAVPARGGTA-TFTVSFGVAEWKPHLRTVEELLQRA 384 Query: 439 DEALYIAKRRGRNRVELWKA 458 D ALY AK GRN V +A Sbjct: 385 DRALYAAKNAGRNCVRTEEA 404 >UniRef50_A1K902 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K902_AZOSB Length = 610 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 20/315 (6%) Query: 148 MEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLG 207 + V+ AFT ++ R+ + +++ + + + + D Sbjct: 311 LSVLAEAFTGELDIRMLDEVERRL----RDVIDKQSHLKRQLSDAQQRLKTMLAGFIDRL 366 Query: 208 SSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVK 267 +S + +F A + I + + Q +R TRN + R Sbjct: 367 ASFSNTTGEF--------HDVLDQCATRISAAHDISELSDVVEQMLRETRNTQESARRSG 418 Query: 268 FLL-----QIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 L Q+ + I+ L REL E V D LT LNR+ L REIA A R Sbjct: 419 EELAELREQVESANQHILRLQRELDETS--ELVRHDPLTGALNRKGLDEALAREIARARR 476 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 G+PL + ++DVD FK++NDT+GH GD+ LR + + VR D V RYGG+EF+IVL Sbjct: 477 HGSPLCLALLDVDNFKQLNDTYGHRAGDDALRHLFSVIREAVRPQDAVGRYGGEEFLIVL 536 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 + + R++ + + AN + + ++ S G A + D + I AD+A+ Sbjct: 537 PDTDTEQAAAVVVRLQREL-TRRFFLANSQKLLITFSAGIARLHADEDPQLAIDRADKAM 595 Query: 443 YIAKRRGRNRVELWK 457 Y AKR G+NRV + Sbjct: 596 YAAKRAGKNRVLIAA 610 >UniRef50_B9M9A9 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M9A9_GEOSF Length = 400 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 83/277 (29%), Positives = 137/277 (49%), Gaps = 29/277 (10%) Query: 187 ASILSWEIDIIYKILLDSDLGSSLPL--SQADFGLWFNHKGRHYFSGIAEVGHISRLIQD 244 A++LSW I ++Y++L+ LP+ + F + FN +G++ I R ++ Sbjct: 138 ATVLSWTIFLLYEVLVIWTKSIPLPILTNNTFFFIAFN------ITGMSASYSIERYMR- 190 Query: 245 FDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLL 304 + R K Q N ++ + + E +D LT L Sbjct: 191 ---------------QDFLQRRKIREQTENLKKALLDVEKSRHEA--EEMAKLDPLTSLY 233 Query: 305 NRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV 364 NRR +I +RE+A R LS+++ID+D FK +NDT+GH GD++L+ ++ A + Sbjct: 234 NRRHFFSIAERELARYRRYRHSLSIIMIDLDHFKRVNDTYGHFIGDQVLQALAAAIDKLM 293 Query: 365 RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAM 424 R +D RYGG+EF I++ E RI+ +E T++ G I ++LS+G A Sbjct: 294 RKADTPCRYGGEEFAILMPETDLAAAQNLGRRIKDAIESTEIDTRKG-PIKVTLSMGIAS 352 Query: 425 FNGHPD--YERLIQIADEALYIAKRRGRNRVELWKAS 459 +G D E+L++ AD ALY AK GR+ + +W S Sbjct: 353 LDGAEDACIEQLVERADHALYQAKYSGRSLIRIWDKS 389 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 2/183 (1%) Query: 277 SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 ++ + LRE +E +D LT LLNRR + E++ R+ + L++D+D+ Sbjct: 274 NRFLKELRE-AQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDR 332 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK+INDT+GH GD +L + +VR D V RYGG+EF+++L + S + TAE+ Sbjct: 333 FKKINDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEK 392 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 IR+ T + A G IA++ SIG +M G + +I AD ALY AK GRNRV Sbjct: 393 IRAVTAATPIMFA-GRQIAVTTSIGISMMQGDETAKAMIARADAALYEAKNSGRNRVVCA 451 Query: 457 KAS 459 +A+ Sbjct: 452 EAN 454 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 5/172 (2%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + + D LT + NR I K I ++ R TPLS++ +D+D FK+IND + Sbjct: 584 KKLSKQLETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKKINDNF 643 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH GD +L+++ + ++R SD R+GG+EF+I+L N AE+IR +E Sbjct: 644 GHEKGDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRDAIESH 703 Query: 405 KLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 + I +++S+G E + AD ALY AK+ GRNRV ++ Sbjct: 704 DF-----DGIKVTVSLGVTQLKEDDTIESFVNRADIALYQAKKEGRNRVVVF 750 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 66/170 (38%), Positives = 99/170 (58%), Gaps = 4/170 (2%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 + V+ + D LT L NR + T+ + EI A R P+S+L+ D+D FK+INDT+G Sbjct: 324 KLKNVAEKKAITDKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYG 383 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H+ GD L+ +++ +R SDYV R+GG+EF+ +L E + + AE+IRS +E Sbjct: 384 HDKGDYALKTIAEIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYN 443 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 K +++SIG M + I+ ADEALY AK +GRNRVE+ Sbjct: 444 FKDIG----RVTVSIGVTMLKIGEPLDNAIKRADEALYAAKNKGRNRVEV 489 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 2/188 (1%) Query: 269 LLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLS 328 + + N +Q+ ++ E +E + D LT+L NRR + E R+ PLS Sbjct: 814 IRFLNNQRAQLELMVAEKTKE-LKGLARQDSLTQLGNRRAFDEQLQYEFKRCERSEQPLS 872 Query: 329 VLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASEN 388 + IIDVD FK IND + H GD++L ++S + +R DY+ R+GG+EF +++ E + Sbjct: 873 LAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNMLRDIDYIARWGGEEFALLMPETTAK 932 Query: 389 ETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRR 448 E L+ AERIR R+E T + E +A+++SIG A +P++ L+ AD+ALY AK+ Sbjct: 933 EALQAAERIRQRIEDTSYQHLADE-LAVTVSIGVASSEHYPNHSALLVAADKALYKAKQS 991 Query: 449 GRNRVELW 456 GRNR EL Sbjct: 992 GRNRTELA 999 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 59/165 (35%), Positives = 94/165 (56%), Gaps = 4/165 (2%) Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 +D LT L NR I + EI ++R PLSV++ D+D FK+INDT+GH+ GD Sbjct: 325 EEMATVDKLTGLFNRHKFQEIAEIEIKRSHRHKRPLSVILFDIDHFKKINDTYGHDIGDV 384 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +LR++++ N+R DY R+GG+EF+I+ E E + AE++R VE Sbjct: 385 VLRELAKIIKQNIRKYDYAIRWGGEEFLILTPETDEKQAFAMAEKLRKAVESHTFP---- 440 Query: 412 EDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 E +++S+G A + + ++ I+ AD ALY +K GRN+ + Sbjct: 441 EVGKVTISLGVASVDPNESIDQAIKKADNALYGSKLGGRNKTTVA 485 >UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y4_AMMDK Length = 615 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 69/178 (38%), Positives = 101/178 (56%) Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 + E++R +D LT+L NRRFL ++ A R P S+L IDVD+FK +N Sbjct: 418 IANLRLSELNRRLSLIDPLTQLYNRRFLEEYLTHQVVEAQRLNRPFSILFIDVDQFKNVN 477 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 D +GH GD L ++Q N+R +D V RYGG+EFI VL + AE++R V Sbjct: 478 DFYGHEVGDIALTLLAQTIKQNLREADAVVRYGGEEFIAVLPGTDLEGAAQAAEKVRRAV 537 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 +T + +GE+I L++SIG A + + E +IQ ADEA+Y AK +G+N V + Sbjct: 538 AETPICLESGENIFLTVSIGVAQYRIGLNPEEVIQRADEAMYQAKIKGKNLVVAYHEG 595 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 4/225 (1%) Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI-ITLLRELFEEV 290 + E GH+ + + + + +L L + Q+ + + E Sbjct: 167 MPEHGHLLLPLYAKERVVGVFFYYLPP--DLTLTKAELETFQTVSYQLGLAIDNARLYET 224 Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 R D LT L N + E++ RTG PLS+L++D+D FK++NDT+GH GD Sbjct: 225 VRRLSIYDPLTGLFNHGQFYNLLAEELSRHQRTGRPLSLLMLDIDHFKKVNDTYGHRAGD 284 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 +L+++S R+ D V RYGG+E ++L E +TAER+R VEK Sbjct: 285 AVLQQLSGLLKKQARAIDRVCRYGGEELALILPETDREAARQTAERLRRHVEKCCFATCG 344 Query: 411 GEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVE 454 ++I +++SIGAA E L+ AD ALY AKR GRNRV Sbjct: 345 QQEIGVTVSIGAATCPDAAISAETLVNAADRALYAAKRAGRNRVC 389 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 112/230 (48%), Gaps = 3/230 (1%) Query: 226 RHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRE 285 H + + + + L + V+ ++L+ Sbjct: 316 PHCQHDTSGQPTLCVPLIAQGDTLGVVTLHFETGEALELARPLAQRFAERVA--LSLVNL 373 Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 R + D LT L NRR+L F RE+A R PLS+L+IDVD FK+ NDT+G Sbjct: 374 RLRATLRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYG 433 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD +LR+++ R+ D V RYGG+EF+++L E + AE +R VE Sbjct: 434 HALGDTLLRRLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLA 493 Query: 406 LKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVE 454 + + + E +AL++SIG A + H E L+ AD ALY AK RGRNRVE Sbjct: 494 VTSNDAEFVALTISIGGASWPDHATTPEDLLARADAALYRAKHRGRNRVE 543 >UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIT1_HALO1 Length = 732 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 90/356 (25%), Positives = 140/356 (39%), Gaps = 39/356 (10%) Query: 132 EKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRI--FSLLENAEEEKERQIASI 189 ++ + A ++ RA T + + D +I F L E ER+ Sbjct: 376 RAVERAKYEHERFYHASAMLCRALTLEEVMETAFDAASQIVGFDLAAITIYEPERKR--- 432 Query: 190 LSWEIDIIYKILL---DSDLGSSLPLSQADFG-----LWFNHKGRHYFSGIAEVGHISRL 241 +Y + + D+ L L+ +F K +HY E+ ++ Sbjct: 433 -----HRVYSVRVSDEDAPLIDPESLADLEFRDNTGLAAMVVKNKHYLPAGGELRDLTAP 487 Query: 242 IQDF------------------DGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 + D M +R V+ +L I ++L Sbjct: 488 VYTKQVRLKEAESLLVLPLLSGDEAIGTFMLASRERQQFGKDVREMLGII-ANQVAVSLQ 546 Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 + + D LT L N R + + A RT P ++L+ DVD FK +NDT Sbjct: 547 NGMMYKTMETMATTDGLTGLTNHRTFQDRLVQLLDRAERTRQPAAILLCDVDHFKNVNDT 606 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GDE+LR+V+ +VR D RYGG+EF +VL + AERIR V Sbjct: 607 YGHPIGDEVLRQVAGVLLRSVRKIDIPARYGGEEFAVVLEATDLEGAMNLAERIRKDVAA 666 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRNRVELWKA 458 + + G +++SIG A F LI+ AD ALY+AK GRNR ++ Sbjct: 667 LVVDSDKG-PFQVTMSIGIASFPDDATDRAVLIERADSALYLAKESGRNRCMSYQT 721 >UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium RepID=B2V5Y5_SULSY Length = 411 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 2/259 (0%) Query: 197 IYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNT 256 +LD + S++ FG+W KG+ Y + + L +DF + Sbjct: 155 FLNSILDGGIFSNISHQSCAFGIWLKEKGKEYIDEEHILKDLKHLHKDFHNLIEIAESYK 214 Query: 257 RNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKRE 316 +N + L +L I+N + I L + + E+ +D LT NRR I ++ Sbjct: 215 KNKKFKDLYF-MILNIQNIMIWIGNEFLYLNTKFIKLEMSIDPLTGAFNRRGFEIIIQKL 273 Query: 317 IAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGD 376 + + T P+++ + D+D FK+INDT+GH GDE L+ N+R SDYVFR GG+ Sbjct: 274 LEISQITDAPITLAMADLDYFKKINDTFGHLAGDEALKHFVNIIKRNLRKSDYVFRIGGE 333 Query: 377 EFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQ 436 EF+I+L + + ERIR +E+ L +G++I ++ S G A + +I+ Sbjct: 334 EFLILLPNTELKDAVEIVERIRKDLEENSL-HYDGKEIKITASFGLAEVDKEKYINEIIK 392 Query: 437 IADEALYIAKRRGRNRVEL 455 ADE LY AK GRN+V + Sbjct: 393 KADEKLYKAKESGRNKVVV 411 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 4/243 (1%) Query: 221 FNHKGRHYFSGIAEVGHI-SRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 + H I+ I + F I ++ S + T+++ Sbjct: 832 LSPACPHVKGKISSGESIFCLPLAAFGEILGHLQFEQMVTHDNSCVDSKAPPLAETIAEQ 891 Query: 280 ITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKF 337 + L E R E D LT L NRR+L F++E+A A R+G + +L++D+D F Sbjct: 892 LALAIANLQLRETLRQENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYF 951 Query: 338 KEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERI 397 K ND +GH+ GD +L++V++A + VR+SD V R+GG+E I++ AS + R A++I Sbjct: 952 KRFNDEFGHDAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQI 1011 Query: 398 RSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELW 456 R + + + +L++SIG A F + LI+ AD +LY AK GRN V + Sbjct: 1012 RQAIAQLIISYHEQTLPSLTISIGVAAFPESGLASDTLIKSADTSLYQAKAAGRNCVVVH 1071 Query: 457 KAS 459 + S Sbjct: 1072 QPS 1074 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 3/191 (1%) Query: 270 LQIRNTVSQ--IITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 Q+ TV + I L +E + + D LT L NRR+L ++EI A R + Sbjct: 1059 RQLARTVVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYSV 1118 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 +++ID+D FK ND +GH+ GDE+L+ V++ ++RSSD RYGG+E ++L EAS Sbjct: 1119 GIVMIDIDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRSSDIACRYGGEELTLILPEASL 1178 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAK 446 ++T +E+IR +E +L N +++ S G A F H E +++IAD ALY AK Sbjct: 1179 SDTQARSEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGETLEAVLRIADTALYQAK 1238 Query: 447 RRGRNRVELWK 457 GRNRV Sbjct: 1239 ALGRNRVVCAT 1249 >UniRef50_A1K870 Hypothetical sensor protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K870_AZOSB Length = 1005 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 88/340 (25%), Positives = 142/340 (41%), Gaps = 28/340 (8%) Query: 147 AMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKE-RQIASILSWEIDIIYK---ILL 202 AME M R+ LL++ E E RQ+ + L E+ + +L+ Sbjct: 665 AMERMQAMVDRLAERDRHNSLINRLHDLLQSCRSEAEARQVIAPLFGELFQGFDAALMLV 724 Query: 203 DSDLGSSLPLSQA-------DFGL---WFNHKGR------------HYFSGIAEVGHISR 240 D+ G+ + A FGL W +G +F E G+ + Sbjct: 725 DATDGTLHVAAHAGDPQLPPQFGLDSCWGLRRGEPHEIPPGGSPVCAHFGSAPEHGYCCQ 784 Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI-ITLLRELFEEVSRHEVGMDV 299 + + + S +R+T + ++L E R + D Sbjct: 785 PMIVDADVVGLLSIRFPPAADESTLDNLHYLVRSTADSVKLSLSNLRLREALRQQAIHDP 844 Query: 300 LTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQA 359 LT L NRR+L + E+ A R GTPL++ ++D+D FK ND +GH GD +L ++ + Sbjct: 845 LTGLFNRRYLDDVLNHELVRAQRDGTPLTLAMLDIDHFKRFNDEYGHEAGDLVLAEIGRI 904 Query: 360 FYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLS 419 + +R SD R+GG+E IV+ +S E + + + +L A++LS Sbjct: 905 LREQLRRSDVPCRFGGEELAIVMPASSAENATERLEELAQMIGRLQLAFGGRRLPAVTLS 964 Query: 420 IGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKA 458 G A H D L++ AD ALY AK +GR R+ A Sbjct: 965 AGVAEAPIHGADSAHLLRSADLALYQAKAQGRARIVSATA 1004 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 4/217 (1%) Query: 239 SRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMD 298 S D DG+ + + ++ + L+ V + + + + + D Sbjct: 281 SERKTDLDGLLDVMSEISSGASDEISYICEALKDMILVLKDKMENIQSYSDRLEYLANRD 340 Query: 299 VLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQ 358 LT L NRR + I E ++R G+ LSV+++D+D FK +ND +GH GD +L ++ Sbjct: 341 SLTGLWNRRKMDQILLSETERSSRYGSSLSVVMVDIDHFKNVNDNFGHEVGDTVLSSIAA 400 Query: 359 AFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSL 418 + R+ D V R+GG+EF++VL E L AER+RS VE +DI ++ Sbjct: 401 LMKNCTRAGDSVGRWGGEEFLVVLPETDVKGALEYAERMRSAVEDNVFH----DDIRITS 456 Query: 419 SIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 S G + + ADEALY AK +GRNRVE+ Sbjct: 457 SFGVTQYRSGEPVNEFVARADEALYDAKEKGRNRVEI 493 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 114/202 (56%), Gaps = 3/202 (1%) Query: 260 NNRSLRVKFLLQIRNTVSQIITL--LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREI 317 + + Q+ VS+ I+L + E + D LT L NRR++ KREI Sbjct: 918 SEPEKISEVKQQLARAVSEHISLALVNLQLRESLESQSIKDSLTGLYNRRYMEESLKREI 977 Query: 318 AHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDE 377 A R P+ +++IDVD FK+ ND +GH GD IL +V NVRS D RYGG+E Sbjct: 978 NLAQRKQHPVGLIMIDVDHFKQFNDNFGHKAGDLILHEVGNFLMANVRSGDIACRYGGEE 1037 Query: 378 FIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQ 436 F+++L EAS +++ + AE+IR +++ + N +L++SIG A F H E LIQ Sbjct: 1038 FLLILPEASLSDSQQRAEQIRKGIKQLNFQQYNSAFTSLTVSIGVACFPAHGKQGETLIQ 1097 Query: 437 IADEALYIAKRRGRNRVELWKA 458 AD ALY AK +GR+RV ++ + Sbjct: 1098 SADMALYQAKNQGRDRVVVFSS 1119 >UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNX7_RHORT Length = 492 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 86/344 (25%), Positives = 144/344 (41%), Gaps = 40/344 (11%) Query: 147 AMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDL 206 A E +T + A E++ + +L E+ E+E+ + L + + L + + Sbjct: 155 ATERVTHESELEFNRAQLENQAVELVALAEDLNAEREQLETARLDADEGRRFLQTLIATI 214 Query: 207 GSSLPLSQAD----------------------FGLWFNHKGRHYFSGIAEV--------- 235 + + FGL FS E Sbjct: 215 PNPFFHQDLEGRIRGCNAAFAALHGRDHRTDMFGLTVADLTDAAFSSRTERLDAELMAKG 274 Query: 236 --GHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRH 293 + D +G + N L + + + L+ + +++ ++ EE R Sbjct: 275 GNVSYEAVFADAEGRARTMIYNKAVLTDAAGQAVGLVAVITDITE-----QKRMEEALRR 329 Query: 294 EVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEIL 353 D LT LNRR +R++A A R G P++V + D+D FK +ND GH TGDE L Sbjct: 330 LATTDPLTGALNRRAFMEAARRDLALAQRHGEPVTVALADIDHFKRVNDQHGHATGDEAL 389 Query: 354 RKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGED 413 + + +R+SD + R GG+EF ++L + + A+R+R + ++ +GE Sbjct: 390 KTFVATVHGALRASDVLGRMGGEEFALILPHTALASAMLLADRLRQTLANLRVPCPSGE- 448 Query: 414 IALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELW 456 + ++SIG A H + L+Q ADEALY AK GRNRV Sbjct: 449 VEFTVSIGLAELGTHGTTIDTLLQAADEALYRAKSAGRNRVIAA 492 >UniRef50_Q6AMZ3 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AMZ3_DESPS Length = 330 Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 5/195 (2%) Query: 263 SLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 S + ++ + + + E + + + + D L NR+ + E+ ANR Sbjct: 110 SDEISVIIYDTTALLEAKATINEQLD-IVKKQASTDPLLGCYNRKMFNDLLATEVMRANR 168 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 P S+++ID+D FK +NDT+GH GDE+L+ +S ++R SD R+GG+EFII+L Sbjct: 169 HNHPFSLIMIDIDNFKSVNDTYGHLVGDEVLKGLSSLTAKSIRESDLFARWGGEEFIILL 228 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 E AE+IR + NG + S G + F+ + E LI AD+AL Sbjct: 229 PETYLTGAAVVAEKIRLNIAN----YDNGTAGKRTCSFGVSEFSIGTNPEILINNADKAL 284 Query: 443 YIAKRRGRNRVELWK 457 Y AK G+N+V L++ Sbjct: 285 YAAKGNGKNQVMLYR 299 >UniRef50_B7K273 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Cyanobacteria RepID=B7K273_CYAP8 Length = 308 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 4/214 (1%) Query: 243 QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE--EVSRHEVGMDVL 300 D + + + + + +V LL T ++ + ++L E + + D L Sbjct: 92 NDKEHLIKAFEQGAVDYVTKPFKVPELLARVKTHVELKQVQKQLQEACQTMKKLADTDEL 151 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 T + NRR L +RE + R GTP +L+IDVD FK IND +GH GD+ ++ V + Sbjct: 152 TGIANRRCLLEFAQREFQRSLRYGTPFCLLMIDVDHFKNINDKYGHPNGDKAIQWVVEII 211 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 +R D+ R+GG+EFI+VL + + L AERIR + L + + L+ SI Sbjct: 212 KLGLREVDFFGRFGGEEFIVVLPQTALGGALEVAERIREAIASQPLTL-EQDTVTLTASI 270 Query: 421 GAAMFNGHP-DYERLIQIADEALYIAKRRGRNRV 453 G A + G +IQ AD++LY AK +GRN+V Sbjct: 271 GVATYTGEDKTVVGMIQRADKSLYQAKAKGRNQV 304 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 6/180 (3%) Query: 277 SQIITLLRELFEE--VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 ++ R++ E D LT L NR + EI R PLS++++D+ Sbjct: 1090 RKLSAFNRQMAEANAKLEQLSVTDRLTGLYNRMKIDDTLLEEIGRVLRYNYPLSLILMDI 1149 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FK++NDT GH GD +L ++++ N+RS+D R+GG+EF+++ L A Sbjct: 1150 DLFKQVNDTHGHQAGDAVLIQMAKTMDKNIRSTDICGRWGGEEFMVICPHTDLKGALSLA 1209 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 E +R + + I + S G A + LI AD A+Y+AK GRNRVE Sbjct: 1210 EHLRESIARQIFPH----VITQTGSFGVAQYGNGDSEADLIARADRAMYLAKEGGRNRVE 1265 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 73/249 (29%), Positives = 113/249 (45%), Gaps = 8/249 (3%) Query: 214 QADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIR 273 F L + +V LI + + R S+R + Q+ Sbjct: 367 SCAFSLGYAVMKLFILQRDEQVTTQQTLIAK--SAAQDALLHERLSLQESVRQELETQVD 424 Query: 274 NTVSQIITLLRELFE--EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 ++ LREL E D LT + NRRF E+ + R TPLSV++ Sbjct: 425 ERTFELQVTLRELEEKNRELEQLNMEDPLTGIKNRRFFDKKLVMELRRSRREQTPLSVIM 484 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENET 390 +D+DKFK INDT+GH TGD+++R + + R D V RYGG+EF+++L + Sbjct: 485 LDIDKFKVINDTYGHLTGDQVIRTAADTIKKQLQRPLDEVARYGGEEFVVLLPNTQNDGA 544 Query: 391 LRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRR 448 + AE+IR + + G I+ ++S G + E + AD+ALY AK+ Sbjct: 545 IAIAEKIRHAIATNNV-HVAGTTISFTISAGVYTSVAEDINNPEIFTERADKALYFAKQH 603 Query: 449 GRNRVELWK 457 GRN+V + Sbjct: 604 GRNQVINFP 612 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 4/172 (2%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 + E+ + D LT + NRR+L +R + A R PLSV++ D+D FK INDT Sbjct: 442 EKELSELLLKQSIEDTLTGIYNRRYLKDKLERHVNLAKRYERPLSVIMFDIDFFKHINDT 501 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+ GD++L +S+ +N+R++D RYGG+EFIIV E ++ + AE++RS + Sbjct: 502 FGHDVGDKVLIAISKVVSENIRNTDIFARYGGEEFIIVAPETTKEDAKILAEKLRSLIRN 561 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + E I ++ S G E L++ D ALY AKR GRNRV + Sbjct: 562 LHFE----EGINVTCSFGVVSLEKPDTKETLLKRVDNALYEAKRTGRNRVVV 609 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 2/173 (1%) Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 LL + D LT+L NRR + + +RE + R PLSV+I+D+D FK++N Sbjct: 212 LLNARLMQSLYSSSMKDSLTQLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHFKQVN 271 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 D GH TGD++L+K+ N+R++D FRYGG+EF+IVL + E + AE++R + Sbjct: 272 DQHGHQTGDQVLKKIGIILQHNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKLRIII 331 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 E+TK + L+ S G + +I+ ADEALY AK GRN V Sbjct: 332 EETKF--WRQQSANLTASFGLSELWAEDKVPSMIKRADEALYYAKENGRNTVC 382 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 4/209 (1%) Query: 251 QTMRNTRNLNNRSLRVKFLLQIRNTVS--QIITLLRELFEEVSRHEVGMDVLTKLLNRRF 308 Q TR+ + ++ + Q+R + Q L + D LT + NRR Sbjct: 257 QAFHTTRSFSTVYSQMDMMAQLREQQAWTQEALLQVQEANRKLEQLASTDALTGVANRRQ 316 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 L E+ + R G PLS+L +D+D FK IND +GH GDE+L++V++A ++R SD Sbjct: 317 LVERADMEVPRSERHGAPLSLLCLDLDHFKRINDDYGHLAGDEVLKQVAEAIQQSLRPSD 376 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF-NG 427 + R GG+EF ++L + AERIR ++E + G + +++S+G A Sbjct: 377 LLARVGGEEFHVLLPDTDLAGARDVAERIRVKLEGLDIPV-QGVVLHVTVSVGCAQLGPD 435 Query: 428 HPDYERLIQIADEALYIAKRRGRNRVELW 456 D + L ADE LY AK GRNRV + Sbjct: 436 GADMKSLTHTADERLYQAKALGRNRVVIA 464 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 5/212 (2%) Query: 243 QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTK 302 R ++ ++ + L +N +S+ +L E D LT Sbjct: 110 YQLSETLIDWFDGRRVKHSVAVDIGALKNAQNELSEAYAMLALKSVE-LEKASITDALTG 168 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 L NRR L F E+ A R P+S++I DVD FK +ND GH+ GDE+L+ ++ Sbjct: 169 LFNRRRLDESFAHELDRAQRYAEPVSLIISDVDHFKSVNDIHGHHVGDEVLQAMAGLLRH 228 Query: 363 NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 VR+ D V R+GG+EF+I+ + AE++R+ + + S S G Sbjct: 229 GVRALDVVGRWGGEEFLIICPNTDLDGATALAEKLRAAIASAQFPGIGTS----SASFGV 284 Query: 423 AMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 A + ++ + AD ALY AK GRNR+E Sbjct: 285 AQYQDGESFKDTVARADTALYRAKVNGRNRIE 316 >UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1MYJ5_9GAMM Length = 642 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 29/295 (9%) Query: 192 WEIDIIYKILLDSDLGSSLPLS-QADFGLWFNHKGRHYFSGIAEVGHIS----------- 239 W + +I +LL + + LP++ +++GL F +A ++ Sbjct: 350 WAVFLIGALLLALNKFAFLPITLASEYGLQIGAGLEIMFLSLALADRMANTQREKISAQA 409 Query: 240 -------RLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL--FEEV 290 ++ Q+ + ++ M N + + ++ + + ++ L EL E Sbjct: 410 RSLDLAHQVTQEREKLYRAEMENLKIAREHNEVLE--KTVDDRTKELSEALEELSNAHEK 467 Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 ++ D LTK+ NR F ++ E A+R ++++I+D+D FK++ND +GH GD Sbjct: 468 LKNISVTDALTKIHNRYFFDQHWRSEFKRAHRHKMSIALIILDIDHFKKVNDNFGHPAGD 527 Query: 351 EILRKVSQAFY-DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 L+KV+Q+ R SD V R GG+EF ++L E AE+IR +EK + Sbjct: 528 LCLQKVAQSIRIQANRESDLVCRLGGEEFAVILPGTDEMGAYEVAEKIRHTIEKRHIS-W 586 Query: 410 NGEDIALSLSIGAAMFNGHPDYER----LIQIADEALYIAKRRGRNRVELWKASL 460 G+ I +++SIG + E+ + AD+ALY AK GRNR ++++++ Sbjct: 587 EGKTIKITVSIGISAMTPRKSDEKMRNIMFNQADQALYQAKGNGRNRTVIFESNV 641 >UniRef50_B0TV39 Diguanylate cyclase n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TV39_SHEHH Length = 295 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 64/175 (36%), Positives = 98/175 (56%), Gaps = 4/175 (2%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 +L EE + DVLT L NR L ++ EI R PLS++++D+D FK +ND Sbjct: 125 AKLLEEKALKLAKTDVLTGLANRLELDSVLSYEIERLKRFQHPLSIIMLDLDHFKTVNDN 184 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GD+ L +++ +N R D V R+GG+EF+I+ E N ++ AE+ R +E+ Sbjct: 185 YGHLLGDKCLINIAKMMKNNFRLIDTVGRWGGEEFLIICPETDFNGAIKLAEKFRRLIEE 244 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 E ++ S+G F +E L+ AD+ALY AK+ GRNRVE ++A Sbjct: 245 HIFP----EVKRITGSLGVTSFIEGDTHETLVNRADKALYKAKKAGRNRVEAFEA 295 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 4/172 (2%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R +E R D LT L NRR L + E+ R G PL+++++D+D FK IND Sbjct: 321 ERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKRIND 380 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 T+GH++GD +L +V++ +RS+D + RYGG+EF+I E + AE+IRS + Sbjct: 381 TFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRSSIA 440 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 A+++S+G ++ D LI+ AD ALY AK GRNRV Sbjct: 441 MFSFPTVG----AVTISVGISLLESKDDINALIKRADTALYAAKEMGRNRVV 488 >UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DXV0_SULAA Length = 437 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 86/314 (27%), Positives = 136/314 (43%), Gaps = 10/314 (3%) Query: 151 MTRAFTFSDSSASKEDENYRIF--SLLENAEEEKERQIASILSWEIDIIYKILLDSDLGS 208 DE ++ S +E +E I + + D+D+ S Sbjct: 124 FDFLVVLRPYMNYSLDEEKKLLKDSNVEMVLSLQEAAKIHIKNRNKFLKAVADGDTDVLS 183 Query: 209 SLPLSQ-ADFGLWFNHKGRHYFSG--IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLR 265 +LP + +F W G+ Y EV H +L + + N+ ++ Sbjct: 184 NLPDYKICEFTKWLEEHGQKYIDEKSYEEVWHFHKLFHEKFEKIKHIYSKNKENNSLAVY 243 Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 + L I N +++ +L + + D LT NR L + +E + + R G Sbjct: 244 L-LLKDIENASLKLLFILNRISLDNVSKIALKDSLTGFFNRHMLDVLLSKETSRSKRHGY 302 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 +S+L++D+D FK IND +GH GDE+L S+ +N+R SDY FRYGG+EF+I+L Sbjct: 303 KISILMMDLDNFKNINDIYGHLVGDEVLMHFSRIVKNNLRESDYPFRYGGEEFLILLPHT 362 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIA 445 E L AERIR VE K +++S G + I+ AD LYIA Sbjct: 363 DEEGALVVAERIRKSVESYKFPVIE----RITVSCGVREIKNLDNPYIDIEEADRYLYIA 418 Query: 446 KRRGRNRVELWKAS 459 K+ G+NR + Sbjct: 419 KKTGKNRCVYGSTA 432 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 8/239 (3%) Query: 221 FNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQII 280 + H + DG + L + + +V ++I ++ Sbjct: 192 LERRYAHVTREGDTLTAEGFCNALHDGHGAWILARVAPLRDAAGQVVGAMEIIRDITD-- 249 Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 + EE R +D LT+L NRR+ T+ ++E R P+++ +ID+D FK + Sbjct: 250 ---SKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDHFKSV 306 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 ND +GH GD +L V+Q +DN+R D + RYGG+EF+I+L E + ER+R Sbjct: 307 NDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETDLQTACASTERLRVA 366 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWK 457 V + +++ +G ++++LS+G P ERL+ AD+ LY AK+ GRNRVE+W Sbjct: 367 VAERRIETPSG-PVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRVEIWD 424 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 7/222 (3%) Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKF-LLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTK 302 D I++Q NT + + + LL + + + E D LT+ Sbjct: 195 DVTDIYSQIRANTLIASGLTAAISLSLLSMIWILVSRLARRLTKAYETIEVMSITDELTR 254 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 L NRR T EI+ + R G+P+S++I+D+D FK +ND +GH GD +L + + D Sbjct: 255 LHNRRHFETRLAEEISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDWVLTQFATLLKD 314 Query: 363 NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 NVR +D R+GG+EF+++LTE++ ++ AE++R VE + +G I +++S+G Sbjct: 315 NVRKADVPARWGGEEFVVILTESTISQARMAAEKVRRNVESAEFNIPDGRSIPVTVSVGV 374 Query: 423 AMFN------GHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 A + + + L++ AD+ALY AK+ GRNR + Sbjct: 375 ASLDMISGDEMGSEADVLVKTADDALYRAKQEGRNRTVAVSS 416 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 12/236 (5%) Query: 222 NHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 +KGR S + + + I+ + + + L I + QI Sbjct: 460 EYKGRQVLSPRHSFEQWQQDVDGYAPIWTEIQIEA------AKTLAEDLAIGASAYQIEQ 513 Query: 282 LLRELFE--EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 L +EL E + H V D LT++ NR + + E+ R G L+V+++D+D FK Sbjct: 514 LNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDLAVILLDIDHFKR 573 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 +ND +GH+ GD++L+ +S+A + +RSSD R+GG+EF+I+ E + AER+R Sbjct: 574 VNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDLESANQLAERLRR 633 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 R+ + + ++ S G A D L++ AD ALY K GRN VE+ Sbjct: 634 RLSNLQF----DKVGQVTASFGVAELLPSEDRNSLVKRADNALYQVKESGRNSVEV 685 >UniRef50_C0QHN1 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHN1_DESAH Length = 354 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 83/289 (28%), Positives = 142/289 (49%), Gaps = 14/289 (4%) Query: 168 NYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRH 227 NYR+F+ + R I W +YK L+S + + ++ + NH Sbjct: 61 NYRLFAFVI-------RTDRGIDVWLDPRMYKKSLESVIINDFDITDNSNINYLNH---- 109 Query: 228 YFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI--ITLLRE 285 F + S + + R + + + +I N + + I + R+ Sbjct: 110 TFHPDDKESECSLKNLTSYDLIEENCRAKIYMLPNQTLLNYHDEIVNIILKSTGIAISRQ 169 Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 + +D LT NRR +R ++ A R PLS+ + D+D FK +NDT G Sbjct: 170 MNIARLTDAASLDPLTGCYNRREFQNQIQRSVSDATRHKKPLSIFMFDIDHFKRVNDTHG 229 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GDE+L+++S+ DN+R D + RYGG+EFI +L E ++++ + A+R+R +++ + Sbjct: 230 HPAGDEVLKEISRLVADNIRRGDTLARYGGEEFIAILPETAKHKAIELADRLRLKIQSKE 289 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +K +G +I ++ S G A + H D RL++ ADE LY +K GRNRV Sbjct: 290 IKTDSG-NIKVTASFGIAELHPHADSSRLVKDADEMLYKSKLSGRNRVM 337 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 91/404 (22%), Positives = 164/404 (40%), Gaps = 25/404 (6%) Query: 69 MERW-IINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSD 127 M W V+ Q+ + + H V + G+ + + G L + + Sbjct: 447 MFGWKAEEVIGKQLHQLISPKEYHHQVTK-----GM-KDFAQTGQGPLIGRVKEMPAVR- 499 Query: 128 YSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIA 187 ++ + S+ S + + + + ++ R ++ + Sbjct: 500 --RNGEVFLAERSVTSFKLGDSYLAVGSVRDITERKRLEQELRHYANRLTLASKA----G 553 Query: 188 SILSWE-IDIIYKILLDSDLGSSLPLSQADF-GLWFNHKGRHYFSGIAEVGHISRLIQDF 245 I WE + D + L +F G++ K R + + V ++ + Sbjct: 554 GIGVWEWNLRTNDLKWDDQMFRLYGLESGEFDGIYEIWKSRVHPDDLYNVEQSLQIATEH 613 Query: 246 DGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL--------RELFEEVSRHEVGM 297 G + R N L +N + L+ E R Sbjct: 614 TGFWESEFRVIWPSNQVRCIKAAALIEKNADGKPELLIGVNWDVTESREKENQLRRMATT 673 Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D +TKL NRR+ + K EI + R PLS+++ DVDKFK +NDT+GH+ GD +L+ ++ Sbjct: 674 DDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMFDVDKFKAVNDTYGHDVGDMVLKAIA 733 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 +R D + R GG+EF + L E + AER+R +E+ ++ +G + + Sbjct: 734 ATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAMLLAERLRVVLEEASVELPDGGIVDFT 793 Query: 418 LSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWKASL 460 +S+G A+ + D + L++ AD ALY AK GRNRVE + + Sbjct: 794 VSLGVAVLDRSITDVDVLLKHADLALYAAKENGRNRVEAYTQMM 837 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 8/218 (3%) Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE------VSRHEVGMDVLTK 302 L + + + + LR+ EE R + D LT Sbjct: 503 LLDQQGKPFALLGIARDISERRRSEAELRSANDKLRKQLEEIEKLQVALREQAIRDSLTG 562 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 NRR+L +RE++ + R G PLS+LI+D+D FK INDT+GH GD+ L +++ Sbjct: 563 CFNRRYLDETLERELSRSRREGYPLSLLILDLDHFKRINDTYGHMAGDQALIVLAETLRA 622 Query: 363 NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 +R D + RYGG+EF+I++ AE RS++ + ++ +++ + S G Sbjct: 623 GIRHEDVLCRYGGEEFVILMPRMPLAIAAERAELWRSKIAEIRV-TFGNFELSFTASAGV 681 Query: 423 AMFNGHPD-YERLIQIADEALYIAKRRGRNRVELWKAS 459 A + H + L Q AD+ALY AK GRNRV ++ A+ Sbjct: 682 AAYPDHGKMPDELTQAADQALYTAKNEGRNRVVVYSAN 719 >UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GW9_DECAR Length = 469 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 13/236 (5%) Query: 222 NHKGRHYFSGIAEVGH-ISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQII 280 ++ +F E G + Q + L + + R + +R + Sbjct: 242 GYEAEDFFPHFGESGRWLFFTAAPLRNGAGQVIGAIETLQDVTERRRAEEALRES----- 296 Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 EE R D LT L N R L E+ A R G PLS+L++D D FK + Sbjct: 297 -------EERYRSLSQTDSLTGLFNSRHLHEQLPNELERAGRYGRPLSLLVLDCDNFKCV 349 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 ND +GH GD++L+ ++ A +R SD+ FRYGG+EF+++L E + L AER+RS+ Sbjct: 350 NDRYGHLGGDKVLQSLATAIGHCLRRSDFAFRYGGEEFVVLLPETAIQAALAIAERLRSQ 409 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 + A +G+ I ++SIG A L++ ADEA Y+AK RG+N V + Sbjct: 410 FASIETPAPSGDAICCTVSIGVAECVPGESEASLVRRADEACYMAKARGKNCVVMA 465 >UniRef50_Q1MZ89 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q1MZ89_9GAMM Length = 577 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 25/313 (7%) Query: 147 AMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDL 206 A+E+++ + S +E E + L+N ER +A + +W + DL Sbjct: 260 ALEILSDLVVSALGSEQEEFEAF-----LKNLN---ERLLA-LKAW-------LKQGEDL 303 Query: 207 GSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMR--NTRNLNNRSL 264 S +F L I E G + + + + L +S Sbjct: 304 EQKFSDSSTEFDLKMRGHLDE-LKQILESGDTNAMKGAVTQQLDDVFATLDGFKLEQKSR 362 Query: 265 RVKFLLQIRNTVSQIITLLRELFE-----EVSRHEVGMDVLTKLLNRRFLPTIFKREIAH 319 + F I +++ T+ +EL E S+ + D LT L NR ++E Sbjct: 363 EIVFKEHIGELNNRLTTMEKELEEAKEQLNQSQLKAMTDSLTGLPNRGAYDVYAQQEYER 422 Query: 320 ANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFI 379 R G LS+++ DVDKFK INDT+GH GD++L+ +S+ R +D + RYGG+EF+ Sbjct: 423 YKRYGGELSLIVCDVDKFKSINDTYGHQAGDKVLQLISRQVKKGTRETDLLARYGGEEFV 482 Query: 380 IVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIAD 439 ++L E + + + AE+I V + G+ + +++S G A F E++ AD Sbjct: 483 VLLPETKQEDAVSVAEKIIEAVATSPF-HFRGKRVQITISCGVASFKKGYRPEQVFDAAD 541 Query: 440 EALYIAKRRGRNR 452 ALY AK GRN+ Sbjct: 542 AALYRAKENGRNQ 554 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ E+ R D LT L NRRF + + R G LS+L++D+D FK +ND Sbjct: 597 ERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMDIDYFKTVND 656 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH+ GD++L+ +S+ +R+ D R GG+EF I+L + + AER+R+ +E Sbjct: 657 MYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLVAERLRAEIE 716 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVEL 455 TK+ +G + +++SIG A ++ H E+L++ AD LY AK GRN+V++ Sbjct: 717 TTKMNTRSG-SLNITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRNQVKV 769 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 6/270 (2%) Query: 195 DIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMR 254 DI + S L + + + + KG + F ++ + + Sbjct: 294 DIATALKPASSLAALMMVVTFSVSISLFRKGHPLVKFFLVGHTFFVVFNGFAVLYYKGLV 353 Query: 255 NTRNLNNRSLRVKFLLQIRNTVSQIITLLRELF-----EEVSRHEVGMDVLTKLLNRRFL 309 +N+ + + +L+ I ++ L ++ + + D LT+L NRR+ Sbjct: 354 QPNYINSHGVGIGIVLEALTLAFIISYRIKVLEDIRSKQDELKRQASTDPLTRLFNRRYF 413 Query: 310 PTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDY 369 + + A +G PLSV+ ID+D FK +NDT GHN GD +L +V+ F R D Sbjct: 414 MAEGEYVLEQARTSGEPLSVIAIDIDHFKAVNDTHGHNVGDLVLVEVASVFRQFSRDRDL 473 Query: 370 VFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG-H 428 V R+GG+EF+I+L A E AERIR+ VE + +G + +++S+G A N Sbjct: 474 VARFGGEEFVILLPGADLTEGFGCAERIRNAVEAMVIDGGDGLAVRVTVSVGVAEVNPLL 533 Query: 429 PDYERLIQIADEALYIAKRRGRNRVELWKA 458 E ++ AD +LY AK GRNRV + Sbjct: 534 ESVEGAVKRADRSLYEAKAGGRNRVCGFDG 563 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 72/176 (40%), Positives = 102/176 (57%), Gaps = 1/176 (0%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ E D LT +LNRR + E+ A R PL++L ID D FKEINDT Sbjct: 223 RKQLENELEALATRDSLTGVLNRRECSRVLIEELERARRYNRPLALLWIDFDHFKEINDT 282 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 WGH GD +L +S D+VRS D + R+GG+EF+++L E E TAER+R RV Sbjct: 283 WGHAAGDSVLCSISSLLEDSVRSVDTLGRFGGEEFVLILPEMDVAEAEETAERLRQRVCN 342 Query: 404 TKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWKA 458 + +G +I L++SIG A+F H + L AD+A+Y AK++GRN + + +A Sbjct: 343 QPVALESGHNIRLTISIGVAVFPDHGDTLDALCAAADKAMYRAKKQGRNCIAMAQA 398 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 2/205 (0%) Query: 251 QTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLP 310 + N L+ ++ L I ++ I EL +E +D LT L NRR Sbjct: 183 EDFMNAGWLSALAIVAGEFLVILSSFCTIWMASDELQDE-LSEIARIDPLTGLYNRRAFD 241 Query: 311 TIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYV 370 E + A R+G P ++++ D+D FK +ND +GH+ GDE+LR+ + +++R D V Sbjct: 242 ECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIRKHDVV 301 Query: 371 FRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP- 429 R+GG+EF+++L + L AE++R++ T++ + + LS S G A ++ Sbjct: 302 ARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGDDVCLTLSASFGVAHYDSSDR 361 Query: 430 DYERLIQIADEALYIAKRRGRNRVE 454 ++ ++ AD ALY AK++GRNRV Sbjct: 362 EWSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 5/231 (2%) Query: 225 GRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLR 284 G F+G + + IQ+ + + R + + S ++ T+ I R Sbjct: 823 GMRQFAGSGDGDAVG-AIQETEALRKDGTRVSVERSVSSFQLGGRWYAVATIRDITE--R 879 Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + E D LT L NRR + +RE R L++L++D+D FK +NDT Sbjct: 880 KATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMDIDHFKRVNDTH 939 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH GDE+LR++++ +R D + R GG+EF ++L E + A+R+R +EK Sbjct: 940 GHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEVAQRLRRAIEKA 999 Query: 405 KLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVE 454 + G + +++SIGAA N E L++ AD ALY AK+ GRN+V Sbjct: 1000 SMATDAGT-LRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNKVV 1049 >UniRef50_Q0F205 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F205_9PROT Length = 592 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 25/289 (8%) Query: 179 EEEKERQIASI-----LSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIA 233 + + R A W + ++ +L ++ + S + L F +G A Sbjct: 319 QYRRGRLDARFYVAGWSVWSLAMLIAMLRNTAVIPSDFATSFAPALGFFIEGVLL--SFA 376 Query: 234 EVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSR- 292 I+RL+ + + + + ++ L Q + T+ +++ E+ R Sbjct: 377 LADRINRLMNEKETM-------------ELMHIEHLEQEQETLERVVLERTAALEQAMRD 423 Query: 293 --HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 H D LT LNRR + E A R TPL+V++ID+D FK IND +GH TGD Sbjct: 424 TEHLARTDALTGALNRRACFESGETEFDRARRYNTPLAVVMIDLDLFKSINDNYGHATGD 483 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 +L V + R+ D + R GG+EFI++L + S + ER R + + ++ + Sbjct: 484 AVLVAVVETLRGMTRTVDTIGRIGGEEFIVLLPQTSLQDAAALTERYRGAIGQLEVTLDD 543 Query: 411 GEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 I ++ S G A + + I AD ALY AK RGRN +EL + Sbjct: 544 -LAIKVTASFGVACVDVTGETLTQAIGRADAALYRAKSRGRNCIELAEG 591 >UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21PN7_SACD2 Length = 565 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 4/228 (1%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE 289 + V R IQ+ F Q + S ++K L+ TV + R EE Sbjct: 342 DLQSTVSDHIRTIQNALSTFKQA--QPAPSQSLSAQLKALMDRVKTVEEESEKSRAQLEE 399 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 R++ D LT L NR E+ R G PL++ + D+D FK+INDT+GH G Sbjct: 400 Q-RYKATHDPLTSLPNREAYNERAFHELHRFKRYGHPLTLAVCDLDHFKKINDTFGHQAG 458 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D++L+ V+Q +R+ D+V RYGG+EF++V+ E + +++R+ + KT + Sbjct: 459 DKVLKLVAQVVSTRLRNVDFVARYGGEEFVLVMPETDAEQAKTVLDKMRAAIAKTPFRFK 518 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 + + +++S G F G E AD+ALY AK GRN+ + Sbjct: 519 DS-PVTITMSFGIVQFRGEDSVESAFARADKALYEAKANGRNQCVIAP 565 >UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YHX9_9CYAN Length = 676 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 8/235 (3%) Query: 227 HYFSGIAEVGHISRLI---QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 + + H+ + + GI + LN ++ + S + L Sbjct: 446 QHIENSPSISHLCIPMIAQGEALGILYLSFLEVDKLNENQQQLGIMF----ARSIGLALA 501 Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 E R++ D LT L NRR++ REI R P+ +L+ID+D FK+ NDT Sbjct: 502 NLQLRESLRYQSIRDPLTTLFNRRYMEESLTREINRVTRNTYPIGILMIDIDHFKQFNDT 561 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+TGD +L+ + VR SD RYGG+E I++L E + ET AE+IR V+K Sbjct: 562 YGHDTGDSVLKAIGHFLQSQVRGSDIACRYGGEELILILPEVNLKETQNRAEQIREGVKK 621 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWK 457 +LK + + +++SIG A F E +IQ AD ALY AK +GR++V + Sbjct: 622 LQLKRGSQKLNEITVSIGVACFPDQGLTGEIVIQAADAALYKAKEQGRDQVVVAD 676 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 2/159 (1%) Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 D LT+L NRR L + +EIA ++R PLSVL++D+D FK++NDT+GH GD +LR Sbjct: 225 SIKDELTQLYNRRALEELLPKEIARSSRHKQPLSVLLLDIDHFKKVNDTYGHQAGDRVLR 284 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 + R D FRYGG+EF+++L + + AE++R +++ ++ N Sbjct: 285 TTGKLLILQTRKDDLSFRYGGEEFLVLLPNTDVEKAVIVAEKLREAIKRARMLPTN--VD 342 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 + + S G FNG D++ I+ AD+ALY AK GRN+V Sbjct: 343 SCTASFGVTQFNGEDDWQTAIERADQALYSAKENGRNQV 381 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 100/183 (54%), Gaps = 3/183 (1%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + + L R + D LT+L NRR T + E+ R PL+++++D+D FK+ Sbjct: 336 LAVKNALLFREMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLMMLDIDYFKQ 395 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 IND +GH GD +LR+++ + +R++DY RYGG+EF+ +L E + AER+R Sbjct: 396 INDRFGHQAGDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQARVLAERLRK 455 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWK 457 +E + +G+ I ++SIG F + L++ AD ALY+AK GRN V + Sbjct: 456 NIESRVFRH-HGKTIQATVSIGLTGFKPGALTPRDELVREADAALYLAKANGRNVVCTFA 514 Query: 458 ASL 460 S Sbjct: 515 GSC 517 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 6/233 (2%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE 289 + ++D G R+L + L+ + + I EE Sbjct: 102 GSQRLFETLLVPVKDEAGTITHIWGMARDLTRFLVSQNALVHLNEQLEAKILQRTRELEE 161 Query: 290 V---SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 D LT + NRR E + + RTG+ L+++++D+D FK+ ND +GH Sbjct: 162 ANHRLSELSLTDGLTGIANRRRFDAALAEEWSRSARTGSTLALIMLDIDHFKKYNDHYGH 221 Query: 347 NTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 GD+ LR+V++ + R D V RYGG+EF ++L + + AER+R VE Sbjct: 222 QQGDDCLRRVAEVLRSSARRQGDLVSRYGGEEFCMILPDTALPGAFEIAERLRREVENMD 281 Query: 406 LKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELW 456 + + ++ S+G A L++ ADE+LY AK GRN V Sbjct: 282 MPHVLSDVGRVTASMGVAASMPCKAMSPAELLRRADESLYQAKSEGRNCVRGA 334 >UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRL2_PSYIN Length = 611 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 23/280 (8%) Query: 182 KERQIASILSWEI---DIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHI 238 + IL W I +I +L + S GL F+ + A Sbjct: 345 RSYARFYILGWSIWSLGMILAVLQHIGMIPVTLYSDLSTGLCFSIEAALL--SFALADRF 402 Query: 239 SRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE---VSRHEV 295 ++L + + I + ++ L + + Q++T E E+ + Sbjct: 403 NQLRNEKEEI-------------ELIHIEHLKNDQQLLEQLVTERTEELEQAKDRAELLA 449 Query: 296 GMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRK 355 D LT +LNRR EI + R + L++++ID+D FK IND +GH GD L Sbjct: 450 RTDPLTNMLNRRAFFECGSVEIKRSLRYKSSLAIMMIDLDHFKSINDNYGHAAGDNALLS 509 Query: 356 VSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA 415 V+ +R+ D + R GG+EF +++ A A+R+R +EK ++ + + + Sbjct: 510 VANTLKAMIRNVDIIGRIGGEEFAVIIPHADLEIATELAQRLRLGIEKVEI-IIDNQPVK 568 Query: 416 LSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVE 454 ++ G + + ++ AD+ALY+AK GRNRVE Sbjct: 569 ITACFGVTSIDIKSESLDEALKRADKALYLAKENGRNRVE 608 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 10/239 (4%) Query: 226 RHYFSGIAEVGHISRLIQDFDGI----FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 R ++ + FD + R + + + + I ++ Sbjct: 1056 RELLKRYQVKANLVLPVVAFDQLWGLLIAHDCHQPRKWLDHEITLLSQITITAAIAIHQG 1115 Query: 282 LLRELFEE---VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 L + + + +D LT++ NR ++E R+ LS+++ DVD FK Sbjct: 1116 ELHQQLQNANLELKKLSAIDGLTQVANRHRFDVYLEQEWRRLMRSRHSLSLILSDVDHFK 1175 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERI 397 NDT+GH GD L+++++ +V R +D V RYGG+EF IVL E S L AE+I Sbjct: 1176 WYNDTYGHLAGDHCLQQIARVIKTSVGRPADLVARYGGEEFAIVLPETSLKGALFVAEQI 1235 Query: 398 RSRVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVE 454 R +V+ + ++LS+G A + LI ADEALY AK GR+RV Sbjct: 1236 RQKVKNLTIPHTKSAYQCVTLSLGVASLIPSGALSPKALINAADEALYQAKANGRDRVV 1294 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 117/277 (42%), Gaps = 16/277 (5%) Query: 195 DIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMR 254 ++ K + + S L + W F E + ++ D + Sbjct: 324 HLLSKAFSNQSIQSFLFIPLRSRSQWVG--CLTLFRQEREWETLWAGRENPDQRNQMPRQ 381 Query: 255 NTRNLNNRSLRVKFLLQIRNTVSQII------TLLRELFEEVSRHEVGMDVLTKLLNRRF 308 + V + +++I+ L ++ + H+ D +T+L N Sbjct: 382 SFVAWCEIQRGVPDWTGEQLKLAEILGLHLYMILTQQRLTHLIHHQASYDPITQLPNWII 441 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 + A L VLIID+++FK IND+ GH GD +L+K S + + S Sbjct: 442 FNHRLALALVDATHGSNMLGVLIIDLNQFKRINDSLGHGVGDYLLQKASDRLQNCLESYS 501 Query: 369 Y----VFRYGGDEFIIVLTE-ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 + + R+ G FI++L++ A +E + ++++ + ++ + I L +SIG A Sbjct: 502 FLEPLLARWHGAGFIVLLSQLAYVDEAINFSQKLLNDFQE-PF-YVQSQAIYLGVSIGIA 559 Query: 424 MFN-GHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + E L++ A+ A+Y AK++G+N +L++ Sbjct: 560 LAPYDGDSSEVLLKNAESAMYQAKQQGKNTYQLYRPG 596 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 60/173 (34%), Positives = 103/173 (59%), Gaps = 4/173 (2%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ EE + D LT + NRR T E+ +NR GTPLS+++ D+D FK++ND Sbjct: 909 ERKKVEEEIKLLATTDSLTGIANRRAFSTHLASELERSNRYGTPLSLVMFDIDYFKKVND 968 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH+ GD++L+ +S+ N+R+ D V R+GG+EF++++ E+ + E++R + Sbjct: 969 NFGHDAGDDVLQALSELVKRNIRAVDIVARWGGEEFMLLMPESDISAATAAIEKLRREIS 1028 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 G+ +L++S G +F + D + ++ D+ALY AK +GRNRVE+ Sbjct: 1029 DFPF----GQVGSLTVSFGITVFVLNEDSKVFLKRVDDALYQAKEKGRNRVEI 1077 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 139/311 (44%), Gaps = 25/311 (8%) Query: 166 DENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKG 225 D+ R +L + E+ ++ + + + + DL + GL K Sbjct: 14 DDITRNLQVLADMLEQVGYEVTFATDGQQALERAKVAEPDLILLDLMMPKMNGLEVCQKL 73 Query: 226 RH----------YFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNT 275 ++ + + E H+ ++ F + RV+ L+++ T Sbjct: 74 KNDEKLCEIPVIFLTASEEKEHL---LEAFKQGAVDYITKPFYAPELLARVRVHLELKYT 130 Query: 276 VSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335 ++ + D LT + NRR L +I + E A S++++D+D Sbjct: 131 KDELNKKSA-----AFEKQAITDPLTGIFNRRHLMSISEIEYQKAVNYNRLFSIIMLDID 185 Query: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAE 395 FK++NDT+GH GD++L++++Q + +R D R+GG+EF I+L A L+ AE Sbjct: 186 HFKKVNDTYGHIVGDQVLKRMTQEVQNLLREGDVCGRFGGEEFAIILPGADLKIALKIAE 245 Query: 396 RIRSRVEKTKLKAANGED-----IALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRG 449 R+R + + + I +++S+G ++ D +++ + AD+ALY AK +G Sbjct: 246 RLRQAIADFYIPIYDSNSSSNLKIKITISLGVTTYHIDDDKLDKMWRRADDALYQAKAKG 305 Query: 450 RNRVE-LWKAS 459 RN+V +++ Sbjct: 306 RNQVCSIYEPG 316 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 8/220 (3%) Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 I+ + + + + RV+ L+++ ++ + E+ R D LT Sbjct: 94 IRGLEQGASDFVTKPFDTGELVARVRVQLKMKGLQDEL-----KRSNEMLRTLSITDPLT 148 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 L NRR L + +E ++R G PLS++I+D+D FK+INDT+GH GD +L ++ Sbjct: 149 HLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDYFKKINDTYGHQEGDRVLTILADIVR 208 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 +RS D RYGG+EF+++L E E L AER+R V++ + + G + +++S+G Sbjct: 209 RRLRSYDLAARYGGEEFVLLLPETPVQEALSIAERLRLEVQEHVFEGSLGGLV-ITISLG 267 Query: 422 AAMFNGH--PDYERLIQIADEALYIAKRRGRNRVELWKAS 459 A + + L + ADEALY AK+ GRNRVEL + Sbjct: 268 VATYPSSRVESIDSLFRQADEALYRAKQGGRNRVELMAGA 307 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 117/252 (46%), Gaps = 14/252 (5%) Query: 216 DFGLWFNHKGRHY------FSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFL 269 D+ H Y FS AE + L+Q F + R N + Sbjct: 355 DYKAALEHHKLFYAVKTKIFSEEAERKTKNLLLQHELEEFKREAEIYRLKNVELVSANEN 414 Query: 270 LQIRNTVSQIITLLRELFEEVSRHEVGM-------DVLTKLLNRRFLPTIFKREIAHANR 322 L++ + +L E R + D LT L NRR F+ E R Sbjct: 415 LEVTTLALKEANAENQLLLERLREQAETLERLVTYDGLTGLANRRHFDEQFEYEFRRTRR 474 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 PLS+ + D+D FK++ND + H GDE+L+KV+ F +NVR+ D V RYGG+EF+ + Sbjct: 475 YKRPLSIAMSDIDFFKKVNDNFSHQVGDEVLKKVASIFRENVRAGDLVARYGGEEFVFIF 534 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEAL 442 TE ++ +R AE+IR +E + + +++SIG A G + LI AD L Sbjct: 535 TETNKESAIRAAEKIRKAIEDYDWSNVH-AGLKVTISIGVAEDAGFDGCDELIAAADSKL 593 Query: 443 YIAKRRGRNRVE 454 Y AKR GRN+V Sbjct: 594 YEAKRNGRNQVR 605 >UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepID=A1WM32_VEREI Length = 612 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 124/234 (52%), Gaps = 9/234 (3%) Query: 229 FSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE 288 F +A++ +S+ + D + ++ R+ L ++ ++ + ++ E Sbjct: 375 FGLLADMVLLSQALADRVKLLSEQ-RDAAELREIEQKIATTALLKQANEDLERMVLERTS 433 Query: 289 EVSR------HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 E++R H +D+LT + NRR+ + E A R LSV++ID+D FK++ND Sbjct: 434 ELARARDEAEHFARIDMLTGVANRRYFEEVATMEFARTQRGQQALSVILIDIDLFKQVND 493 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH GD ++R V++ ++VR SD+V R GG+EF ++L + TAER+R R+ Sbjct: 494 RYGHAAGDAVIRAVARLAKESVRESDFVARIGGEEFSVLLPGIGQAPAFATAERLRERIA 553 Query: 403 KTKLKAANGEDIALSLSIGAAM-FNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++ +G + + S G + P + L++ AD+ALY AK+ GRN+V + Sbjct: 554 ACVVEH-DGHSLGFTASFGVSEQVADDPGFSSLLRRADQALYAAKQAGRNQVVV 606 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 66/184 (35%), Positives = 91/184 (49%), Gaps = 3/184 (1%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + L L E + D LT L NRR+ + E R G PL+ L++D D FK Sbjct: 165 LCLENVLNRERLKWLGLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPLACLMLDADHFKR 224 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 INDTWGH GD +L+ +++ +R D R GG+EF ++L AERIR Sbjct: 225 INDTWGHQAGDVVLKVLARRVRQQLRGCDVAARIGGEEFAVLLPSTPVRHVQLVAERIRL 284 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHP---DYERLIQIADEALYIAKRRGRNRVELW 456 + + + + +S+S+GAAM ERL+ AD ALY AKR GRNR L Sbjct: 285 AIAGEPVHVSPDCVLQVSVSLGAAMLAPGAADISPERLMARADAALYQAKRNGRNRTMLA 344 Query: 457 KASL 460 A + Sbjct: 345 AAGV 348 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 1/182 (0%) Query: 272 IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 + + L L + D LT L NRR L + E A RTG PLS+ I Sbjct: 180 LAEYTRRHTQRLLILLTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPLSIAI 239 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 D+D FK +ND +GH GD +L+ V+ +DN+R D + R+GG+EF+++L E E Sbjct: 240 CDIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDEAGAA 299 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRN 451 R AE++RS VE + +G ++++LS G D + I+ AD+ LY+AK +GRN Sbjct: 300 RLAEKLRSLVEAMEYSY-HGIPVSVTLSFGVHTCGPEGDIDYHIRKADQKLYLAKEQGRN 358 Query: 452 RV 453 RV Sbjct: 359 RV 360 >UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D095_MYXXD Length = 347 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 15/232 (6%) Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL---------FEEVSR 292 ++ + + + ++ S RVK +L+++ ++ REL E Sbjct: 116 VEGLELGADDYLVKPFDMLELSARVKSMLRLKALQDALVEKNRELDRANKELAARREELL 175 Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 D LT L NRR E A + R G PLS++++D+D FK IND++GH GD + Sbjct: 176 ALTRTDALTGLSNRRAFEERLNDEFARSRRYGAPLSLVMLDIDHFKRINDSFGHPFGDHV 235 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG- 411 L+ V+Q +R D + RYGG+EFI +L E + LR ER+R + +L+ G Sbjct: 236 LKAVAQTARARLREVDLLARYGGEEFIALLPETGPADALRVCERVRDAIAALELEHVGGS 295 Query: 412 ---EDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWKA 458 + + L+ S+G A E L++ AD +LY AK GRNRV A Sbjct: 296 GKPQCVRLTASLGVATVPSGDLPSAEALLRAADASLYAAKGAGRNRVHQHAA 347 >UniRef50_Q2KVB5 Putative signaling protein n=1 Tax=Bordetella avium 197N RepID=Q2KVB5_BORA1 Length = 429 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 141/307 (45%), Gaps = 23/307 (7%) Query: 170 RIFSLLENAEEEK-ERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHY 228 S+ + +Q ++L+ ++ + +L +D + + F + + Sbjct: 121 HFVSVQRDITARTLAQQRQALLAQALNATHDAVLIADDKGHILFTNQAFQRAIGYSAKEV 180 Query: 229 FSGIAEVGHISRLIQDFDGIFNQTM------RNTRNLNNRSLRVKFLLQIRNT------- 275 + + + DF + R+T N ++ Q+ T Sbjct: 181 HQLTPQATNSGQPHPDFYKNLLSVIHGGKRTRHTFPNQNAKGSNAYIEQVITTLTDESGS 240 Query: 276 VSQIITLLRELF-----EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 V I++L+++ E++ +V D LT LLNRR +R A+++G SV+ Sbjct: 241 VKHYISVLKDISQFVAREKLLSKQVRSDALTGLLNRRGAAAKIQRLHRAAHQSGRFYSVI 300 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENET 390 + D+D FK+IND +GH GD +L++ + DNVR D V R+GG+EF+I+L + Sbjct: 301 MADIDHFKKINDQFGHLLGDTVLKRCANLIRDNVREGDAVARWGGEEFLILLPNCPLIKA 360 Query: 391 LRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGR 450 + AERIR+ + + ++LS+G + + LIQ AD+ALY AK +GR Sbjct: 361 VALAERIRNTIATLT----DPITGQVTLSLGVGTSSPAETPQSLIQRADKALYKAKAQGR 416 Query: 451 NRVELWK 457 N+V + + Sbjct: 417 NQVAIAE 423 >UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHU8_9PROT Length = 588 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 7/241 (2%) Query: 215 ADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRN 274 DF + + G+ V ++ I + + +V + Sbjct: 354 CDFFVEEEGCIKADMDGVKWVDYLVENHSKVHKIKIDIFGKVYYFSVSASKVLKEKNYYS 413 Query: 275 TVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 V IT E +++ H D LT + NRR+ + EI A R PLS+++ D+ Sbjct: 414 IVLTDITEQ-ENYKKELEHLSVTDALTGIGNRRYFHQKIEEEIHRAKRYQHPLSLIMFDI 472 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FK +ND GH+ GDE+L + ++ +R D R GG+EFII+L A +E + A Sbjct: 473 DFFKHVNDKHGHSVGDEVLIEYTKLINSLLREGDVFCRIGGEEFIIILPHALRDEAQKIA 532 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 E++R+++E + I +++S G + + E + + D+ALY AK GRN V Sbjct: 533 EKLRAKIE------FCQKVIPITMSFGVVEYIVGEEIEFIFKRVDDALYKAKESGRNIVV 586 Query: 455 L 455 + Sbjct: 587 V 587 >UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCX8_9BURK Length = 600 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 5/214 (2%) Query: 250 NQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE---EVSRHEVGMDVLTKLLNR 306 + M ++ + V+ L ++Q + + E +D LT + NR Sbjct: 384 EKHMAQRELVSTQQQLVETLRASEQELAQRVEERTRQLQVANERLEALSMVDGLTGIANR 443 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 R + +E R G PL+++++DVD FK ND +GH GDE LR V+QA R+ Sbjct: 444 RHFDQVLHKEWTRLERAGQPLALVMLDVDWFKRYNDHFGHQAGDECLRAVAQAISGVSRA 503 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 SD V RYGG+EF+I+ + L+ A+R V + + +++S G A+ Sbjct: 504 SDLVARYGGEEFVIIAPGTDGPQALQMAQRACDAVRALGMPHPLAYEAVVTVSCGVAVTV 563 Query: 427 --GHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 E L+ AD+ALY AK +GRNRV L + Sbjct: 564 PGPDDSLENLLGQADDALYEAKAQGRNRVVLAEP 597 >UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SB7_SULDN Length = 487 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 4/227 (1%) Query: 228 YFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELF 287 F ++ I + +N +++ L + + + T Sbjct: 263 IFGLKGTTIYLQEFIAILVITTLFFGVLHQEINESKAKLEELNKNLENMVKEKTKSLMEA 322 Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 + + D LT + NRR + +E + R L++++ID+D FKE+ND +GH Sbjct: 323 NQKLNNLASKDSLTNIFNRRIIDEFISKETIKSKRYNNSLALIMIDIDHFKEVNDKYGHQ 382 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GDE++ + N+R SD R+GG+EFII+L E + N+ A+ IR +V++ + Sbjct: 383 VGDEVILSLVDIISKNIRESDIFGRWGGEEFIILLPETNLNQATIVAQNIRKKVQEYRFD 442 Query: 408 AANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + ++S+G + FN + D I+ D+ALY AK GRNRV Sbjct: 443 KVGQK----TISLGVSEFNSNDDSTVFIKRVDDALYKAKATGRNRVV 485 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 5/216 (2%) Query: 245 FDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELF-EEVSRHEVGMDVLTKL 303 + N+ + +R + V + L E + D LT Sbjct: 134 ILAVLNKLNIVPIPYSPDEIRQALSAYVVIMVLAYVFESALLSSYEKIKKLATTDPLTGA 193 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 NR L + EI + R G LS+++ D+D FK INDT+GHN GD++L+ ++ Sbjct: 194 FNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNIGDQVLKITIDTIKNH 253 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 +R +D + R+GG+EF+I+ ++ AE+IR V+ K++ +++S+G A Sbjct: 254 IRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKVEGIPE----ITISVGVA 309 Query: 424 MFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + I+ AD ALY AK++G+NRVE++ + Sbjct: 310 EYFPDESITDFIKKADIALYSAKKKGKNRVEIYSSE 345 >UniRef50_C9RM68 Diguanylate cyclase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM68_FIBSS Length = 566 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 73/231 (31%), Positives = 117/231 (50%), Gaps = 8/231 (3%) Query: 227 HYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL 286 F + I RL + F+ + R + LN R +++ ++ E Sbjct: 331 EEFKARSSQDEIGRLAKVFNQMHATIKRQIQELNAH--RDMLEKEVKERTYEL-----EQ 383 Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 + D LT+L NRR + ++E+ ANR S++ ID+D FK++NDT+GH Sbjct: 384 ANKKLDLISRTDELTQLPNRRDMHRTIEKEVDRANRFKKAFSIIFIDIDHFKDVNDTYGH 443 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 GD +L+ V+ +R D + RYGG+EF+ +L E + AER R ++E + Sbjct: 444 AAGDAVLKSVASTIRSLLRKYDVLARYGGEEFLTLLPETELKDAAHVAERFRKQIENQTI 503 Query: 407 KAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 G++I +++++G A F+ ER IQ+AD+ALY K GRNRV LW Sbjct: 504 -FFGGQEIKVTITLGVAQFDSGLGAERCIQLADKALYEGKEHGRNRVILWT 553 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 107/192 (55%), Gaps = 4/192 (2%) Query: 265 RVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTG 324 VK LL T + L E + + D LT L NRR+L K+E+ A R Sbjct: 295 EVKQLLATNVTRHISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAKRKE 354 Query: 325 TPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTE 384 L +++IDVD FK +NDT+GH+ GD++L+K+ ++R SD RYGG+E ++L E Sbjct: 355 RSLGIIMIDVDHFKNVNDTFGHDKGDQVLKKLGGFLQRHIRGSDIACRYGGEELTLILPE 414 Query: 385 ASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALY 443 AS T + AE++R V+ L + L++S+G A F H + L++ AD+ALY Sbjct: 415 ASLENTRQRAEQLRQAVKNLDLDLCDHT---LTISVGIACFPEHGYSGKALLKTADQALY 471 Query: 444 IAKRRGRNRVEL 455 AK++GR+RV Sbjct: 472 QAKQQGRDRVIC 483 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 5/180 (2%) Query: 279 IITLLRELFE--EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 + REL + D LT + NR +L F++E+ R +++++D+D Sbjct: 286 VNQHNRELQRVNKKLEQLSQRDHLTGIHNRYYLDQAFQQELTRYKRYQHGFTIVMLDIDL 345 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK+IND++GH GD+++++++ ++VR D V R+GG+EF+I+ E S + AE Sbjct: 346 FKQINDSYGHVVGDDVIKQIAMLLREHVRDQDVVARWGGEEFLILNPETSLDGARTLAEH 405 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 +R + +T + I +++S G + D E +IQ AD ALY AK+ GR++ ++ Sbjct: 406 LRRLIRRTPFTV---DKIDVTVSFGVTDYRAGEDIETMIQRADSALYQAKQSGRDKTVVF 462 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 5/216 (2%) Query: 239 SRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMD 298 + F+ I + L K++ ++ V + L + E + D Sbjct: 150 EEDKKVFETIARMIAAKLALIEQTELVKKYMAELEAKVEERTLEL-KRANEKLEYLASTD 208 Query: 299 VLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQ 358 LT+L+NRR L + ++E +R LS++++D+D FK +NDT GH GDE++ V Sbjct: 209 PLTELVNRRRLDEVLEQEFERTSRYQGELSLILLDIDHFKAVNDTRGHQVGDEVIAGVGN 268 Query: 359 AFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSL 418 R SD R+GG+EF+IV + S + + AE++R +E T+ + + +S Sbjct: 269 IAKQMSRKSDTAGRWGGEEFLIVAPQTSCDNAVAFAEKLRLSIENTEFSSG----VRVSA 324 Query: 419 SIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 S G A + +++ ADEALY AK GRNRVE Sbjct: 325 SFGVASLETGETIQLVLKRADEALYRAKHNGRNRVE 360 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 2/185 (1%) Query: 271 QIRNTVSQIITLLRELFE-EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSV 329 + ++++ + LRE ++ D LT L NRRF +RE+ R T S Sbjct: 108 SLSVLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRNETDASF 167 Query: 330 LIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENE 389 +I+D+D FK++ND +GH GD++L +++ F + R D R+GG+EF+I L + Sbjct: 168 IILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEG 227 Query: 390 TLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRG 449 L AER R +VE+ G + +++S+G + N + E +++ AD+ALY AK+ G Sbjct: 228 ALLVAERTRKKVEELSFNTEKG-PLHVTISLGVSSANENTTLEDMLKRADDALYQAKQNG 286 Query: 450 RNRVE 454 RNR E Sbjct: 287 RNRTE 291 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 9/314 (2%) Query: 147 AMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDL 206 AME + R S D++ R L N + + +++ + ++ + Sbjct: 141 AMEELNRDEVDRPSRIFIVDDDARSSGRLANTLRAQGHKATTLMEAGD--MGELATERVD 198 Query: 207 GSSLPLSQADFG--LWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNR-- 262 L L F H + + V I + + + + Sbjct: 199 VLILSLFARSFDPLKLIAHFKMNPVTRSISVILICDPHDKAKALRGLEIGASDMITIPID 258 Query: 263 SLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANR 322 + ++ + ++ I +LR+ + +D LT L NRR++ ++ + A R Sbjct: 259 RQELAARIRTQTRRTRYIDILRQRVDRGLE-LSVIDQLTGLHNRRYMNGQLEQFMQRAAR 317 Query: 323 TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVL 382 PLS+++ D+D FK +NDT GH GD++LR++ + NVR +D V R GG+EF++++ Sbjct: 318 GNQPLSLMMTDIDHFKAVNDTHGHQAGDDVLREIGKRLRANVRPTDVVCRTGGEEFVVLM 377 Query: 383 TEASENETLRTAERIRSRVEKTKLKAANG-EDIALSLSIGAAMFNG-HPDYERLIQIADE 440 + AERIR V + G +++ +++S G + G + L+ AD Sbjct: 378 PNTPGDLACAAAERIRKAVAAEEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADT 437 Query: 441 ALYIAKRRGRNRVE 454 ALY AK GRNRVE Sbjct: 438 ALYQAKTGGRNRVE 451 >UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SY9_SULDN Length = 611 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 4/166 (2%) Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 +D LT NRR + K+EI R LS+++ D+D FK +NDT+GH G Sbjct: 449 ELERLASIDKLTGAYNRRMIDEFMKKEIFLHVRDSKNLSLIMADIDHFKLVNDTYGHQAG 508 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +L V + +R SD RYGG+EFI++ S + L A++IR +E Sbjct: 509 DAVLSDVGRIISSTIRKSDIFGRYGGEEFIVICPNTSSQQALILAQKIREEIENFHFAEV 568 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + ++S+G A + + E +I+ AD+ALYIAK+ GRNRV L Sbjct: 569 GHK----TISLGVATLIANDEVENIIKRADDALYIAKKEGRNRVVL 610 >UniRef50_C1SIQ7 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIQ7_9BACT Length = 312 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 3/225 (1%) Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE-- 289 I +++ F + N +R+ ++++ + +EL E Sbjct: 86 ITAKSEPEDIVKGFQMGGVDYVTKPFNEAELLMRINTHMELKRARDLLEEKNKELIEAYD 145 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 H D LT + NRR + + +E A R S+++ D+D FK +NDT+GH+ G Sbjct: 146 KIEHLALTDTLTGIANRRNITNMLGKEAARCKRNKGKFSLIMCDIDFFKRVNDTYGHDAG 205 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +L+ +S +R D V R+GG+EF+IVL E + AE++R+ + T++ Sbjct: 206 DYVLKTISHVIQQALREQDIVARWGGEEFLIVLPETDAGNAVAVAEKLRTAIGNTEMSY- 264 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 G +++++ G + ++ E+ I+ AD+ALY K+ GRN+V Sbjct: 265 EGISFSVTMTFGVSEYDVSLGIEKSIKKADDALYEGKQTGRNKVV 309 >UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales RepID=D0J6R3_COMTE Length = 521 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 116/240 (48%), Gaps = 5/240 (2%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 +YF + + I + + IF + + + I + + + L Sbjct: 263 HRLYYFKNLPSLPFIIMVAKAHSDIFTAWRKRALIIACLMGVLTAAF-IGLSFAFVTQLQ 321 Query: 284 RELFEE-VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R + E D LT L NRR L + +E A R + S+L +D+D+FK ND Sbjct: 322 RRIHAESELALLARTDGLTGLNNRRRLDEMLDQEWHRARRNHSIFSLLFVDIDRFKVYND 381 Query: 343 TWGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 T+GH GD+++ ++Q DN+ R D RYGG+EFI+VL + S AE IR+ V Sbjct: 382 TYGHQAGDDVIATIAQCIGDNIRRPGDIAARYGGEEFIVVLPDTSLEGASCLAESIRAAV 441 Query: 402 EKTKLKAANGEDIALSLSIGAAMFNG--HPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + ++ + E +++SIG A + D +I+ ADEALY AK GRN+V ++ S Sbjct: 442 SQLSVEHSGSEFGYITVSIGCAAWEPEHDADVASVIRSADEALYKAKTTGRNKVVVFTKS 501 >UniRef50_A5IF46 Sensor histidine kinase n=5 Tax=Bacteria RepID=A5IF46_LEGPC Length = 565 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 5/212 (2%) Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRF 308 F + N N + ++ + + +LR E R++ DVL+ L NRR+ Sbjct: 358 FKKEAEEQINKENNQEILASMMAEQIALGISNIMLR----ETLRNQSLRDVLSGLYNRRY 413 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 L + RE+ R L+VL++D+D FK+ ND +GH GD +++ + R D Sbjct: 414 LNEVLDRELNRCARKSLSLAVLMLDIDHFKQFNDKFGHEAGDMVIQAFANVLRQVTRKED 473 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH 428 RYGG+EFI+++ E L+ A+ I V + L+ +++SIG M+ H Sbjct: 474 IACRYGGEEFILIIPEIDLEAALQRAQSIHDAVSRIHLRYGGNALTQITISIGLTMYPAH 533 Query: 429 P-DYERLIQIADEALYIAKRRGRNRVELWKAS 459 D + LI AD ALY AK GRN+ L+ + Sbjct: 534 GNDMQDLITAADNALYEAKNSGRNKTVLYHKN 565 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 81/332 (24%), Positives = 134/332 (40%), Gaps = 19/332 (5%) Query: 130 AAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASK----EDENYRIFSLLENAEEEKERQ 185 + S ++++ + TR + A + + R L + Sbjct: 252 HNRAVAALRRSSETLEMRVAARTRELAEQHARAEEMTLVAEAALRFSESLIDTIPSPVWF 311 Query: 186 IASI--LSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQ 243 ++ + + D + LPL + + ++ Sbjct: 312 KDALGRVQTSNRAFRALFGDGEPKLLLPLEDT------VTDAELMSGACDQASFEAPILP 365 Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKL 303 G + + + L++ V + + + R+ E R D LT Sbjct: 366 PSGGRLDTMVLKSAYLDDEGRPVGVIGVLTDISD------RKAMERELRRLATTDSLTGA 419 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 NRR E+ ANR G PL++L++DVD FK IND GH TGD+ LR++ + Sbjct: 420 FNRRHFLAAAGTELERANRYGNPLTLLMLDVDYFKSINDAHGHGTGDDALRRLVEGLRHA 479 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 +R D + R GG+EF ++L E L TAER+R++V +L +G +A ++SIG A Sbjct: 480 LRDIDVIGRLGGEEFAVLLPETGMAGALITAERLRAQVADLRLDLPDGGQLAFTVSIGIA 539 Query: 424 M-FNGHPDYERLIQIADEALYIAKRRGRNRVE 454 E ++ AD+ALY AK GRNRV Sbjct: 540 APRAEDGSVEAVLARADKALYRAKDEGRNRVC 571 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 6/217 (2%) Query: 248 IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE---VSRHEVGMDVLTKLL 304 + R R + + + + I ++ L + E + +D LT++ Sbjct: 1046 LIAHDCRKPRKWQDHEITLLSQIAIGAAIAIHQGELYQQLESANLELKKLSCLDGLTQVA 1105 Query: 305 NRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV 364 NR +E R+ LS+++ DVD FK NDT+GH GD+ L++V+Q + V Sbjct: 1106 NRHRFDMYLDQEWRRLMRSQQFLSLILCDVDHFKGYNDTYGHLAGDQCLQQVAQVIKNAV 1165 Query: 365 -RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 R +D V RYGG+EF I+L + L AE+IR +V+ + ++LS G A Sbjct: 1166 GRPADLVARYGGEEFAIILPDTPLRGALYVAEQIRQQVQYLTIPHPQSTHQWVTLSSGVA 1225 Query: 424 MFNGHP--DYERLIQIADEALYIAKRRGRNRVELWKA 458 F + LI ADEALY AK GRN+V + Sbjct: 1226 SFIPSAALSPKALINAADEALYQAKANGRNQVVFSPS 1262 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 118/280 (42%), Gaps = 22/280 (7%) Query: 195 DIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMR 254 ++ K + + S L + W F E + Q D + + Sbjct: 310 HLLSKAFGNQSIQSFLFIPLRSRSQWVG--CLTLFRQEQEWETLWAGQQKLDQHNSTPRQ 367 Query: 255 NTRNLNNRSLRVKFLLQIRNTVSQIITL------LRELFEEVSRHEVGMDVLTKLLNRRF 308 + V+ +++++ L +++ + RH+ DV+T+L N Sbjct: 368 SFSPWCEIQRGVREWSTDELKLAEVLGLHLYMIVIQQRLTRLIRHQASYDVITQLPNGII 427 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 + A G L V+I+D+++FK IND+ GH GD +L KV + + D Sbjct: 428 FNHRLSLALVDAVNQGNMLGVVILDLNQFKRINDSLGHGVGDFLLTKVRDRLQNAL---D 484 Query: 369 -------YVFRYGGDEFIIVLTEAS-ENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 + R+ G FII+L++ S +E++ +++ + ++ + I L S+ Sbjct: 485 TYSIFNPLLARWHGARFIILLSKLSYSDESVMVCQKLLNDFQE-PF-YVQSQAIYLGASL 542 Query: 421 GAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 G A+ E L++ A+ A+Y AK++G+N ++++ Sbjct: 543 GIALAPYDGDTAEILLKNAESAMYEAKKQGKNTYQIYRPG 582 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 3/182 (1%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 + L L + + D LT++ NR EI R LS+L++D+D FK+ Sbjct: 310 LALRNALIFKEVKLRADRDGLTRIYNRHSFDERLIYEIKRRRRYNHDLSLLMVDLDHFKQ 369 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 +NDT+GH GD +LRKV + + R++D RYGG+EF+++L SE + AERIR Sbjct: 370 VNDTYGHKAGDMVLRKVGEILTETFRTTDLAARYGGEEFVVLLPHTSEEAAWKLAERIRE 429 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWK 457 ++ + +G + +++ SIG A + L+ AD+ALY AK GRN V + + Sbjct: 430 SIQGCVFR-FDGHEFSVTASIGVASVEAGALTRDDDLLIKADKALYKAKNNGRNMVVISR 488 Query: 458 AS 459 Sbjct: 489 PE 490 >UniRef50_B8G8L1 Diguanylate cyclase n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G8L1_CHLAD Length = 369 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 72/273 (26%), Positives = 137/273 (50%), Gaps = 13/273 (4%) Query: 189 ILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGI 248 +L + +++ ++ D+ L + F L F H+ ++ + ++ I + Sbjct: 102 LLGQTLPQLWEQTVNDDIWFLLMICTLAFHL-FRHRISVIL--VSSLYGLALAIVGGQVL 158 Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLR------ELFEEVSRHEVGMDVLTK 302 N + R+L+V + I II+ R ++ ++ + +D+LT Sbjct: 159 VAGLQGNDVTMGLRALQVYGMGGIFLCFIYIISRYRSISQRLQIEYQLMQEWAFIDMLTG 218 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 L NRR + + I ++ R PL++ + D+D FK++NDT+GH GD++LR++++ Sbjct: 219 LFNRRRCEQLLQTNIEYSRRYHQPLTICLWDIDHFKQVNDTYGHEVGDQVLRQIARLAQS 278 Query: 363 NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 + RS+D V R+GG+EF ++L +E +R+R + KT+++ ++ S G Sbjct: 279 STRSTDLVGRWGGEEFCLILPHTCLSEAEELVDRLRHLI-KTQVRVGQQ---PVTASFGL 334 Query: 423 AMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++ + LI+ ADEALY AK GRNRV + Sbjct: 335 VEYDTTDNLASLIRRADEALYAAKAAGRNRVVV 367 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 4/172 (2%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 ++ E H+ D LT NR + T+ +E A R P S+L++D+D FK IND Sbjct: 620 RQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDIDHFKRIND 679 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 T+GH GDE+LR + A +R +D + R+GG+EF+++L AE++R +V Sbjct: 680 TFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVAEQLREQVT 739 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 T +++S+G A ++ ADEA+Y+AK+ GRNRV Sbjct: 740 ATAFPCVG----LVTISLGVAECRPGESIRDWVKRADEAMYVAKKGGRNRVV 787 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 3/237 (1%) Query: 225 GRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQ--IITL 282 H + H+ ++ +GI + + + V++ +++L Sbjct: 372 CPHVLASPTPGRHLCLPLKGSEGILGVLQVHWLPERDADDDNDARVDFAKGVAEDMVLSL 431 Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 E D LT L NRRFL RE+A A R PL VL++D+D FK IND Sbjct: 432 SNVRLREQLEEASIRDALTGLYNRRFLDETLARELARAERQAVPLCVLMLDIDHFKPIND 491 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH GD L V++ +VR D V RYGG+EF+I++ A + R + +R V Sbjct: 492 DYGHALGDRALVAVAELLNAHVRRDDIVCRYGGEEFVIIMPGAGLDAAQRRGDHLRRCVS 551 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWKA 458 ++A I L++S+G A + H + E L+ AD ALY AK+ GRNR+ + Sbjct: 552 ALDVEANVPAPIRLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQGGRNRLTIASP 608 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 108/190 (56%), Gaps = 2/190 (1%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 + LL I ++ + L ++ ++ + D LT L NRR + E A R G Sbjct: 232 IGLLLGITYFLTWRLVLNLDMAQKHLKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGE 291 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 PL ++++D+D FK+INDT+GH GD +L+ V+ +R D + R GG+EF+IV Sbjct: 292 PLCLIMLDLDHFKKINDTYGHPFGDLVLKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGT 351 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA-MFNGHPDYERLIQIADEALYI 444 + E + A+R+RS VE K+ + + + +++S G A ++ G + E L++ AD ALYI Sbjct: 352 TREEAVVLAQRLRSTVEMEKIAYED-KKVTITVSCGVAFLYKGDDNVEILLKRADSALYI 410 Query: 445 AKRRGRNRVE 454 AK+ GRNRV Sbjct: 411 AKQEGRNRVV 420 >UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n=3 Tax=Zymomonas mobilis RepID=Q5NP17_ZYMMO Length = 1008 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 84/284 (29%), Positives = 141/284 (49%), Gaps = 17/284 (5%) Query: 186 IASILSW----EIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHY-FSGIAEVGHISR 240 S+L + +I Y++L +LP F ++ + H+ F+ A + I + Sbjct: 724 RFSLLDYGFSRQIHYSYRLLGQDSEWLNLPAGSVPFVIYSHLPAGHFTFALRATIPGIKQ 783 Query: 241 LIQDFDGIFNQTMR-NTRNLNNRSLRVKFLLQIRNTVSQIITLLREL-------FEE--- 289 I + N R +L + +L + + +S I LR + +E Sbjct: 784 PILETHFPVNVEYRWYEYRFVKIALIIILVLFLYDLISNQIRKLRLMITNKTLELQETNL 843 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 + D LT LLNRR +F++ A ++T SV I+D+D FK+IND GH G Sbjct: 844 RLKELANTDELTGLLNRRAFTEMFEKNCAQFSKTKDQFSVFILDIDFFKKINDNEGHLAG 903 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +++ ++Q +N+R D+ RYGG+EF+I+L A T + A RI + + + + Sbjct: 904 DAVIQYIAQKITENIRQQDFAARYGGEEFVIMLPNADMETTCQVASRIGNAISEKPVPY- 962 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 G +I +++SIG A+ + D L++ ADE LY+AK +GRNRV Sbjct: 963 QGREIPVTVSIGVAVMKENDDANSLLERADERLYMAKNQGRNRV 1006 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 93/393 (23%), Positives = 159/393 (40%), Gaps = 28/393 (7%) Query: 68 AMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVL--KKILYPV--I 123 AM R S ++ + I Q +A +AR + + R + LY Sbjct: 208 AMYRLRNEPFSESDRELLQAIARQTAIALQNAR------LYQRAIRNADERFALYQASIE 261 Query: 124 FSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKE 183 + + QV + + + V + F + + ++ E I + ++ Sbjct: 262 IGATLDLEQLYQVIYRATTRL-----VSHQRFVIAIPTENRMVEYVHIVTPTGRQAPQQV 316 Query: 184 RQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQ 243 + + + + L P Q + + + + + Sbjct: 317 PLHCGLAGYVLRFGVSLRLSGAQALPEPAVQ------LLPEIEGELADGSLLAAPLIVGD 370 Query: 244 DFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKL 303 G + L LL V+ L + + D LT L Sbjct: 371 RIIGALLVWSNHHDAYTMADLNALELLAATVAVA----LHNAFRFAQIQSQAITDNLTGL 426 Query: 304 LNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDN 363 NRR + +E+ R TP+S+ +IDVD FK+INDT+GH GD +LR++++ Sbjct: 427 ANRRHFLQVLHQEMERNRRYHTPVSIAMIDVDHFKQINDTFGHIAGDYVLREIARRCRQQ 486 Query: 364 VRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAA 423 +R D + RYGG+EF ++L E + + L+ ER+R+ + T + +G I ++SIG A Sbjct: 487 LRDVDVLARYGGEEFGLILPETTYEQALKATERLRTVLATTPIMI-DGRQINPTISIGVA 545 Query: 424 MFNGH--PDYERLIQIADEALYIAKRRGRNRVE 454 F+ PD LI AD ALY+AK++GRNRV Sbjct: 546 SFHPTVYPDPSSLIADADRALYLAKQQGRNRVC 578 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 121/228 (53%), Gaps = 3/228 (1%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE 289 SGI + ++ +++ +G+ + + + N + L + I + + + Sbjct: 139 SGIKQGSYLGVPLKNQEGVIIGVLNAHKPMVNGFSKNDLRLFAAVAENVAIAVSNAMTLQ 198 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 +R + D LT L NRR+ F+RE+ + R G +S+++ID+D FKE ND++GH G Sbjct: 199 QTRELIRKDELTGLYNRRYFFERFEREVYRSRRYGRTISLMMIDIDHFKEYNDSYGHLRG 258 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +L+ +S+ F ++R D V RYGG+EF+++L E S +R AE++R VEK Sbjct: 259 DRVLKTISRIFESSLRKIDVVARYGGEEFLVLLPETSRENAIRVAEKLRQAVEKVDFNED 318 Query: 410 NGEDIAL--SLSIGAAMFNGHPDYERL-IQIADEALYIAKRRGRNRVE 454 +++IG + + L + +AD+ALY+ K +GRN+V Sbjct: 319 APNLGPCALTITIGVSAIPDDANEPILALDLADKALYMGKAQGRNQVC 366 >UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodopseudomonas palustris RepID=Q216C5_RHOPB Length = 735 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 272 IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 IR+++ + + + + D LT + NRR E+ NR TP S L+ Sbjct: 541 IRDSIHTEKRIELQELARGLQVQATTDPLTGMFNRRVFNEGLAAELVRFNRQQTPFSSLL 600 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 D+D FKEIND GH GD++L +S+ +VR +D++ R+GG+EF I+L A + + Sbjct: 601 CDIDHFKEINDVHGHLMGDQVLVHLSRILSRSVRQTDFLARWGGEEFGILLVGADQTAAV 660 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRN 451 AE++R+ + T L+ S G A E L+ D ALY AK GRN Sbjct: 661 EFAEKLRTTIAYTVFDDVGN----LTCSFGVAECVLGDTPESLLARVDNALYRAKMNGRN 716 Query: 452 RVELWKASL 460 RVEL L Sbjct: 717 RVELAPPPL 725 >UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM04_9GAMM Length = 291 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 66/177 (37%), Positives = 97/177 (54%), Gaps = 12/177 (6%) Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 HE D LT L NRR + E+A + R G PLSV+++D+D+FK IND GH G Sbjct: 103 RLEHESITDPLTGLFNRRHMDRRLDEEVARSRRYGQPLSVVMLDIDEFKGINDRLGHLAG 162 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D IL ++Q N+R D R+GG+EF+++ ++ L+ AE++RS + +T + Sbjct: 163 DYILESIAQRLRQNLRRVDLAARFGGEEFVVIAPHTDQDAALQLAEKLRSEIAQTPIILK 222 Query: 410 NGEDIA--------LSLSIGAAMFNGHPDYER----LIQIADEALYIAKRRGRNRVE 454 E + +++S+G A N PD L+Q AD+ALY AK GRNR E Sbjct: 223 GHEHVPPCAPDELYVTVSVGVASLNIEPDSRDNADFLLQRADDALYRAKAGGRNRCE 279 >UniRef50_C9YCE2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCE2_9BURK Length = 382 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 76/235 (32%), Positives = 123/235 (52%), Gaps = 4/235 (1%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFL---LQIRNTVSQII 280 +G ++ G + L++ ++ + + +N FL + + ++ Sbjct: 146 RGAYFVIGSFLAISAAFLLRTVGALYGEVGIGSITTSNPLQSATFLFVSVALMMVCQGVV 205 Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 + E +E +R D LT L NRRF+ ++A A R G P+SVL+IDVD FK I Sbjct: 206 LMTNERADERNRLLAMQDELTGLSNRRFIMEALALQLAQARRNGKPVSVLMIDVDYFKSI 265 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 NDT+GH +GD +LR ++ + +R+ D R+GG+EF++VL + A +R+ Sbjct: 266 NDTYGHLSGDRVLRNLATSLRSRLRAQDMAGRWGGEEFLVVLPDTDAAGATILAGNLRAE 325 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRVE 454 VE + A +G I L+LSIG + + + +I AD+ALY AK+ GRNRVE Sbjct: 326 VEDARWSAQDGRSIPLTLSIGVHTCDSATEELDTVISAADQALYRAKQAGRNRVE 380 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 123/252 (48%), Gaps = 9/252 (3%) Query: 213 SQADFGLWFNHKGRHYFSGIAEVGHISRLI---QDFDGIFNQTMRNTRNLNNRSLRVKFL 269 S A F GR G++++ +I ++ D GI + + L L + L Sbjct: 250 SSASFVAVSPLDGRERIFGLSKLENIPLILMVGYDLAGILTEWSKRAGQLAAGFLLLVAL 309 Query: 270 LQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSV 329 + + +T +R+ E R + D LT + NRR L ++ + E+A R G L++ Sbjct: 310 ATLG--LRSYLTTVRQR--EELRRQADTDPLTGVPNRRHLMSVAEHELARTLRYGGALAL 365 Query: 330 LIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENE 389 ++D+D FK INDTWGH TGD +++ ++ A + R D R GG+EF VL E Sbjct: 366 FMVDIDHFKAINDTWGHPTGDRVIQVLAAAMAASAREQDTAGRLGGEEFAAVLPETDLEG 425 Query: 390 TLRTAERIRSRVEKTKLKAAN-GEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIAKR 447 AER+R VE + G+ + ++SIG A G E ++ AD ALY AK Sbjct: 426 AAIMAERLREAVEAITSALDDQGQPVRFTVSIGVAAIQLGDGSVEDILGRADRALYAAKH 485 Query: 448 RGRNRVELWKAS 459 GRNRVE+ + Sbjct: 486 GGRNRVEMAATA 497 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 13/285 (4%) Query: 182 KERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRL 241 +E ++S WE + L +++ + + + D + Sbjct: 177 REAGVSSFERWEESRKALVDLIAEIADRMRVMRKD-----ASGATGRLDETLSRIRTTTR 231 Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSR---HEVGMD 298 + D + + + L +++ + L + + ++ + E D Sbjct: 232 LGDLESLRGALVTEAEALRSQTQSLATSLSESQAQLDLTRKQLQQVQDDLKKAKEESLTD 291 Query: 299 VLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQ 358 LT++ NRR L RE A R G PLS++IID+D FK+INDT+GH GD +L++V+ Sbjct: 292 PLTQVANRRALFQSLTRETARTRRYGEPLSLIIIDLDHFKKINDTYGHPVGDRVLKEVAG 351 Query: 359 AFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSL 418 +R SD + RYGG+EF+ +L E + + + AE+IR V + K GE +++S Sbjct: 352 HARALLRDSDTLARYGGEEFVALLPETTLPQAMEKAEQIRLSVAAMRFKL-KGESLSISA 410 Query: 419 SIGAAMFNGHPDY----ERLIQIADEALYIAKRRGRNRVELWKAS 459 S+G A + E + AD+ALY AK GRN V + Sbjct: 411 SLGVAQLDDGASQDANNEAFVHRADQALYRAKSGGRNCVIQADPT 455 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 2/201 (0%) Query: 259 LNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIA 318 + +L F+ ++R ++ L E E++S D LT L RR L E + Sbjct: 169 MAQMALIGGFISKLRASLRVKNHQLNEALEKIS-VMASTDELTGLCTRRELMKQLSNEFS 227 Query: 319 HANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEF 378 R+ LS+ ++D+D FK IND++GH GD +L+KV+Q VRS D + RYGG+EF Sbjct: 228 RCRRSSGALSLCLLDIDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCLGRYGGEEF 287 Query: 379 IIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIA 438 +++L + + TAER+R V E +++S+GAA E LI Sbjct: 288 LLILPQTPLDGAFITAERLRRAVMDIPFPEVAPE-FRVTISLGAAELEEGEAMETLISRV 346 Query: 439 DEALYIAKRRGRNRVELWKAS 459 D+ALY AK GRNRV + + Sbjct: 347 DKALYAAKGAGRNRVVSAEQT 367 >UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvestris BL2 RepID=B8EJQ5_METSB Length = 738 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 4/210 (1%) Query: 246 DGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLN 305 + + + L + ++V L + + D LT L N Sbjct: 516 NRVLGIVITLLATLMALIYLFGKERSVYDSVQMDKRLKLQELARSLEFQASTDPLTGLFN 575 Query: 306 RRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVR 365 R EI ANR PLS+++ D+D FK IND GH GD +L ++S+ ++R Sbjct: 576 RMKFDQALAAEILRANRYNRPLSLVLFDIDHFKNINDLHGHQVGDNVLVQLSRIAAAHIR 635 Query: 366 SSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF 425 +D + R+GG+EF+I++ E++ +TAE +R+ + + + A A++ S G A + Sbjct: 636 GTDVLARWGGEEFVILVPESNGQMAYQTAENLRNAIGQAVFEKAG----AVTCSFGVAEY 691 Query: 426 NGHPDYERLIQIADEALYIAKRRGRNRVEL 455 E LI AD A+Y AK +GRN+ EL Sbjct: 692 VDGDAAESLISRADAAMYRAKIKGRNQAEL 721 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 104/234 (44%), Gaps = 7/234 (2%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 K + FS + ++ I + D + S+ + L+ + L Sbjct: 266 KRYYVFSRVGDLPLIVVVGVGMDAVTAPWQAQWLAGAATSVVLCLLILGAAVALRREMLR 325 Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R E+ D LT L NRR +RE A R + ++VL++D+D FK++ND Sbjct: 326 RFEIEQEFLRLSQTDSLTGLPNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQVNDR 385 Query: 344 WGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 GH GD +LR+VS ++ R D+ RYGG+EF I+L E AERIR+ +E Sbjct: 386 IGHPGGDRVLREVSDIIRASLHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRAAIE 445 Query: 403 KTKLKAANGEDIALSLSIGAAM--FNGHPDYERLIQIADEALYIAKRRGRNRVE 454 +++SIG A ++ AD ALY AK GRNRV Sbjct: 446 ANT----AEGVAPVTVSIGLAAGLAAPKGTLAEMMIAADHALYRAKETGRNRVV 495 >UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWQ3_DESAC Length = 648 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 61/169 (36%), Positives = 94/169 (55%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L ++ D LT +NRR L + A R LSV+ D+D FK +NDT+G Sbjct: 478 LLQQKLERLATTDELTGAVNRRQLFIYTDQFCQLAKRYKKALSVIFYDLDHFKAVNDTYG 537 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GDE+LR+++ +R +D + RYGG+EF I++ E + AERIR R+ ++ Sbjct: 538 HAAGDEVLRQITTRIQSMLRDTDILARYGGEEFCILVPETDGDHAYLFAERIRQRISESS 597 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + ++GE + +++S+G A + LI AD+ +Y AKRRGRN V Sbjct: 598 VNLSSGESLQVTVSMGVATYQEDEQGSSLIDRADQGVYEAKRRGRNCVV 646 >UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WGU1_CHLAA Length = 324 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 4/226 (1%) Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVS 291 I+ + + ++ F+ + RV+ L + + REL ++ Sbjct: 98 ISALDDVEDKVRAFECGGVDYIAKPFQPLEVLARVRTHLALAQARKALEAANRELQRALA 157 Query: 292 RH--EVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 R MD LT + NR + + E A A R PL++ ++DVD FK+IND +GH G Sbjct: 158 REAELARMDWLTGVYNRSHFYELARHEFAIATRYERPLTMCMLDVDHFKQINDRYGHLVG 217 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D++LR V+Q +R++D + R+GG+EFI++L + L AER+R + ++ Sbjct: 218 DQVLRAVAQTVAHQIRTADSIGRFGGEEFILLLPNTNLPSALTLAERLRVTIADLQVHTD 277 Query: 410 NGEDIALSLSIGAAMFNG-HPDYERLIQIADEALYIAKRRGRNRVE 454 G + ++S+G A ERLI AD ALY AKR+GRN V Sbjct: 278 RG-IVTATISVGVAERQSTDTTIERLIDRADRALYAAKRQGRNCVV 322 >UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLY1_DESAH Length = 440 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 126/239 (52%), Gaps = 11/239 (4%) Query: 216 DFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNT 275 + W + +++ SG I D F + + +++ + N Sbjct: 207 EVFPWLDKSFKNFISGTDTKKTFETAINDKGQFFFISFSRSLDISG---------KFSNA 257 Query: 276 VSQIITLL-RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV 334 ++ I + R+ E+ D LT NRR +F++E+ + R L++++ID+ Sbjct: 258 IAIIEDITKRKTMEKELEKLATTDPLTGAKNRRSFLNLFEKEMKRSKRYNYTLALVMIDI 317 Query: 335 DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTA 394 D FK+IND +GH TGD+IL + + +R SD R+GG+EFII+L E + A Sbjct: 318 DHFKKINDNFGHETGDKILNLLVAKCHSVLRDSDIFARWGGEEFIILLPETDLLQASSAA 377 Query: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNR 452 ER+R + +++L+ +G +I ++SIG +F N + + +I+ AD+ALY+AK++GRNR Sbjct: 378 ERLRGALAQSELRTNDGTNINFTVSIGFTIFGNKNILIDEIIKKADKALYLAKKQGRNR 436 >UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax=Pseudomonas fluorescens RepID=Q3KAB6_PSEPF Length = 559 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 118/236 (50%), Gaps = 13/236 (5%) Query: 222 NHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 N++ +F V I++L Q D + + R L + + TV+Q Sbjct: 324 NNQPGAHFPLRHPVREIAQLGQSIDAMTQSLLAKERELQETNA------SLEATVAQRTA 377 Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 L E+ + D LT + NRR RTG P ++L+ID D FK IN Sbjct: 378 ALTLANAELL-NLATHDGLTGVYNRRRFDEKLTEYSLLFRRTGRPFALLLIDADHFKRIN 436 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENET-LRTAERIRSR 400 DT GH GD++LR+++Q ++RS+D+V RYGG+EF ++L E ++ +T AE+IRS Sbjct: 437 DTHGHAAGDDVLRQLAQLIQISIRSTDFVARYGGEEFAVLLPEIAKPDTPDIVAEKIRSA 496 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVEL 455 + + A +++SIG ++ + L++ AD+ LY AK GRN+V Sbjct: 497 IAEADFPAVG----PVTVSIGVSLADPADNTPTTLVKRADQQLYKAKAAGRNQVAC 548 >UniRef50_A8UV88 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UV88_9AQUI Length = 475 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 2/211 (0%) Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRF 308 ++ +R R + +L + + I L + E D LT L NRRF Sbjct: 262 LSEQVRKDRTRDELFTLKSSVLNMAQELEAYIKELEKKKE-KFEELAYTDPLTGLNNRRF 320 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSD 368 + I + R PLS+L++D+D FK IND +GH+ GD +L+K+++ NVR+SD Sbjct: 321 FMENARTIIDLSKRYREPLSLLMMDIDNFKSINDNYGHDVGDLVLKKLAEVIRKNVRTSD 380 Query: 369 YVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH 428 R+GG+EF+++L E L AERIR+ + +K +G+DI S+SIG ++ + Sbjct: 381 IPARFGGEEFVVLLPRTDEKGALMVAERIRNEFRNSSVKV-DGKDIWTSVSIGLSVLSEE 439 Query: 429 PDYERLIQIADEALYIAKRRGRNRVELWKAS 459 D + LI+ ADEALY AKR G++RV +++ Sbjct: 440 DDIDSLIKKADEALYQAKRSGKDRVVIYREE 470 >UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZT6_DESAD Length = 442 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 4/167 (2%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E R D+LT L NRR + I E R TP++ ++ID+D FK INDT+GH Sbjct: 279 EELRQMSQTDMLTGLYNRRKMDEIMHHEFDRFKRYNTPITFILIDIDNFKTINDTYGHAV 338 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD +L + ++ N R +D + R+GG+EFI+V E + E + AE++R R+ +T+ Sbjct: 339 GDNVLVRFAEILISNTRKTDRIGRWGGEEFIVVCPETTSGEGMIIAEKLRQRIAETRFPT 398 Query: 409 ANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 N + S G N D+ L D ALY +K +GRN+V + Sbjct: 399 INN----CTASFGITEINQQDDFMSLFARCDTALYSSKEQGRNKVTM 441 >UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece RepID=B1WQB8_CYAA5 Length = 493 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 14/264 (5%) Query: 197 IYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNT 256 +Y + + L N + + + EVG ++ + ++ + Sbjct: 236 LYTGKIIAYPLEQLTHIAQRVTQESNFQLKAPVTTQDEVGKLATSMNQLIQWIDEHITEL 295 Query: 257 RNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKRE 316 + R ++ ++ L++ + V +D LT++ NRR+ + RE Sbjct: 296 KE-----ARQTLEKRVEQRTIELQQALKK-----LKALVNLDGLTQIFNRRYFDEVLYRE 345 Query: 317 IAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGG 375 R + +S+++ DVD FK N+T+GH GD L++V+Q V R SD V RYGG Sbjct: 346 WQRGRREKSVISLILCDVDYFKIYNETYGHLGGDSCLQEVAQGIRRQVKRPSDLVARYGG 405 Query: 376 DEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG-EDIALSLSIGAAMFNGHPD--YE 432 +EF+I+L N L AE IR+ +E + N +++S+G YE Sbjct: 406 EEFVILLPNTDLNGALALAEMIRNAIEAMNIPHENSLVSDHVTISMGVTSKIPQETDEYE 465 Query: 433 RLIQIADEALYIAKRRGRNRVELW 456 LI+ AD+ALY AK GRN V + Sbjct: 466 HLIEEADDALYQAKENGRNCVCYF 489 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 4/213 (1%) Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 I D R + L + T E E H +D LT Sbjct: 318 IGDLFNAAEAFRRENIRERELLADYRELSRTLEAKVTQRTRELEAKNEELDHLASVDKLT 377 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 NRR L E+ A+R PLS+L++D+D FK++ND +GH TGD++L +SQ Sbjct: 378 DTFNRRALDKALLAELERADRYQRPLSILLMDIDLFKQVNDEYGHLTGDKVLVTLSQTIR 437 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 +N+R+SD + R+GG+EF+++ E + AE++R +E T + +++SIG Sbjct: 438 ENLRASDILGRWGGEEFLVICPETDLEQARNVAEKVRQAIEGTDFELGK----TITISIG 493 Query: 422 AAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 ++ E L+ AD+ALY AK +GRNRV Sbjct: 494 LSVLIEGTSAESLVAEADKALYQAKSQGRNRVC 526 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 5/193 (2%) Query: 271 QIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVL 330 + + QI+ L++ ++++R +D LT++ NRR + E A R+ L+++ Sbjct: 313 AVLQSRIQILMQLKQSQDQLARS-ARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALI 371 Query: 331 IIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENE 389 ++D+D FK ND +GH GD LR V+Q ++ R+ D V RYGG+EF+++L E + Sbjct: 372 MLDIDHFKPFNDGYGHLAGDGCLRTVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDG 431 Query: 390 TLRTAERIRSRVEKTKLKAA-NGEDIALSLSIGAAMFNG--HPDYERLIQIADEALYIAK 446 AERIR + K K+ + D +++S G A + LI +AD+ LY AK Sbjct: 432 AQMIAERIRKAIAKLKINHEFSSTDNTITISAGVACLSPSQEGSPHELILLADQGLYQAK 491 Query: 447 RRGRNRVELWKAS 459 +GRN+V + + S Sbjct: 492 AQGRNQVAIVQTS 504 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 122/260 (46%), Gaps = 6/260 (2%) Query: 204 SDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRS 263 + G L ++ + R F + + +L G+ N + + +NL + Sbjct: 422 AQSGQPLLINDVEKDSRVAMANRLRFKSKSLICMPLKLKDKIIGVLN--LSDKKNLAPFT 479 Query: 264 LRVKFLLQIRNTVSQIITLLRELFEEVSR--HEVGMDVLTKLLNRRFLPTIFKREIAHAN 321 +L ++ ++ E+ EE R D LT L NRRFL + E+ + Sbjct: 480 DADLQVLTSFANLASLMIERTEVLEESERFEQLSVTDALTGLYNRRFLKNRLEEELNRSI 539 Query: 322 RTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIV 381 R G L+V+ ID+D FK ND GH GD+ LR ++ ++R D V RYGG+EF V Sbjct: 540 RQGLNLTVIFIDLDFFKNYNDLCGHLAGDDALRITAEIIKASLRDMDIVARYGGEEFCAV 599 Query: 382 LTEASENETLRTAERIRSRVEKTKLKAANGED-IALSLSIGAAMFNGHP-DYERLIQIAD 439 L S+ E + AERIRS +E+ K + + L+ S+G A F + L+ +D Sbjct: 600 LPGTSKVEAMIVAERIRSEIEREKFPGESEIPQVRLTASLGVASFPEDGRTFTALVHASD 659 Query: 440 EALYIAKRRGRNRVELWKAS 459 ALY AK GRNR+ + S Sbjct: 660 VALYEAKAGGRNRIVAARTS 679 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 8/222 (3%) Query: 237 HISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVG 296 + ++ + + + RV L+I+ + R+L E Sbjct: 86 ETADKVRGLEAGASDYVTKPFEEGELVARVNTHLRIKELYESLQETNRQLQE-----LAN 140 Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 D LT L N R+ ++ A R LS ++ D+D FK+ NDT+GH TGD +L + Sbjct: 141 RDGLTGLYNHRYFQDAMTKDFQRAMRYHESLSCVLCDIDFFKKFNDTYGHQTGDIVLSTL 200 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 ++ D++R +D RYGG+EF +VL AER+R VE+ + AN +++ Sbjct: 201 ARIVEDSLRDTDLAARYGGEEFALVLYHTPAAAAFMVAERLRESVEQHEF-IANDLSLSV 259 Query: 417 SLSIGAAMF--NGHPDYERLIQIADEALYIAKRRGRNRVELW 456 ++S+G A + PD++ LI+ AD+ALY AK GRN+V + Sbjct: 260 TISVGVATYPHPDIPDHKTLIECADKALYKAKENGRNQVISF 301 >UniRef50_Q2BP61 GGDEF/HAMP domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP61_9GAMM Length = 580 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 67/229 (29%), Positives = 117/229 (51%), Gaps = 5/229 (2%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE 289 E+G I+ I + R N ++ ++ R Q+ R+ EE Sbjct: 351 DRKDELGLIADHINSMNRRIAHRDVELREARN---TLEHRVEERTRDLQLEVNARKKAEE 407 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 D LT++LNRR + EI ++R L+++++D+D FK+IND +GH G Sbjct: 408 ELIKLASTDPLTRVLNRRAFDQRSREEIERSHRYNRELAIILLDIDHFKQINDQYGHQFG 467 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D++L V+ ++R++D + R+GG+EFII+L E E L AER+R + + K+ Sbjct: 468 DKVLIDVANLIGPSLRAADCLCRHGGEEFIILLPETDEATALLIAERVRKSIAQHKI-TD 526 Query: 410 NGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 + ++++ S G A++ D + + AD+A+Y AK GRN+V + Sbjct: 527 RHDSLSITASFGVAVWRREEGDIQPAVYRADQAMYKAKNSGRNKVVAFT 575 >UniRef50_Q47FN5 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Betaproteobacteria RepID=Q47FN5_DECAR Length = 313 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 5/233 (2%) Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL--FEE 289 ++ + + + + + + + +++ + +I + ++ + R+L + Sbjct: 81 LSSLDDDANIEKGIAAGGDDYLHKPISEIVLGAKIRAMQRIVLMRASLLAVTRKLDAANQ 140 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 D LT + NRR+ E A R +++L+ D+D FK NDT+GH G Sbjct: 141 ELIRISSTDSLTGVANRRYFDEAMSIEWRRARRHSNSIALLMCDIDYFKLYNDTYGHQAG 200 Query: 350 DEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 DE LRK++ A + R SD V RYGG++F ++L E S L AE+IR ++ + Sbjct: 201 DECLRKIAAAISRHTERPSDTVARYGGEKFAVILPETSIGGALMVAEKIRQATKELNITH 260 Query: 409 ANGEDIALSLSIGAAMFNGHPD--YERLIQIADEALYIAKRRGRNRVELWKAS 459 A+ + LSIG A D + LI AD+ALY AK+ GR+RV A+ Sbjct: 261 ASSPTGQVGLSIGIASAAPGFDNPPDDLILAADKALYRAKKEGRDRVYRADAT 313 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 5/285 (1%) Query: 176 ENAEEEKERQIASILSWEIDIIY---KILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGI 232 E + R +L ++Y ++LL+ D+ L L + F + + + Sbjct: 95 EQLTLPQARLRLGLLITIPLLLYGAARLLLNGDVAPGLILGYSFFPVLTVAMLTVFPLTL 154 Query: 233 AEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSR 292 E + + + T +L + +L + L L Sbjct: 155 REALGYLLPVLLVYTLLEIAVGRTLDLQSLGGLWLLVLVALVAAWSVAGQLLMLLR--LY 212 Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 + D LT L NRR L +RE A RTG PL+VL+ D+D+FK IND GH GD + Sbjct: 213 RQATRDPLTGLFNRRALTEQIERERARFLRTGRPLTVLLFDLDRFKRINDHHGHLVGDRV 272 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE 412 L+ + N+R++D+ R+GG+EF+ L E + + AER+R E +L A G Sbjct: 273 LQVFANVVQQNLRTTDHFGRWGGEEFLAALPETTSEQARVVAERVRQACENERLTLAEGP 332 Query: 413 DIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 + + SIG A + + L DEALY AK GRNRV + Sbjct: 333 SLGFTTSIGVATLHRDETLDSLFNRVDEALYNAKAYGRNRVVEAE 377 >UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPL1_PSEMY Length = 557 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 73/220 (33%), Positives = 112/220 (50%), Gaps = 4/220 (1%) Query: 240 RLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL--FEEVSRHEVGM 297 R I+ + + + + + R L++ ++ LR + E R + Sbjct: 328 RAIERTTRHGPTLLGHMLYVRDVTQRHLSELKLAEALALSEERLRTISNLHEQLREQALC 387 Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR+L F RE+A A R PL++ +ID+D FK +ND GH GD++L+ V+ Sbjct: 388 DPLTGLYNRRYLDEFFSRELARAQRENLPLALALIDLDHFKRLNDECGHLVGDDVLKAVA 447 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 + DN+RS+D VFR GG+EF+++L E + I S++ + G+ ++ Sbjct: 448 KHLLDNLRSTDAVFRIGGEEFLLILPGVDPVEACERLQNICSQLAGQSIATRGGDQ-QVT 506 Query: 418 LSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELW 456 LS G A + E L+ AD ALY AKR GRNRV Sbjct: 507 LSAGLAHWPQQGVVLEELLHAADAALYQAKRGGRNRVCCA 546 >UniRef50_A7BV03 Sensor protein n=2 Tax=Beggiatoa sp. PS RepID=A7BV03_9GAMM Length = 866 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 73/307 (23%), Positives = 127/307 (41%), Gaps = 21/307 (6%) Query: 149 EVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGS 208 M++ D+ +++ + E +R ++ + ++ ILLD + Sbjct: 570 NTMSKILVVDDNLNTRKMLCRHLTKSGYEVS-ETDRGKIALEKIKEELPEVILLDVMMPD 628 Query: 209 SLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKF 268 Y + + I+ D + + +++ R++ Sbjct: 629 MTGFEVCQQLRKTPQYELIYIIMLTALTDSKYKIEGLDKGADDYVTKPFDISELLARIRV 688 Query: 269 LLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLS 328 + + E +D LTK+ NR + +E++ A R LS Sbjct: 689 GERTAIK----------------KREATIDGLTKVYNRNYFDMYLAQEVSRAKRYKRELS 732 Query: 329 VLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASEN 388 ++I D+D FK INDT+GH TGD +L++ +Q R SD V R+GG+EFII+L E Sbjct: 733 LIITDIDLFKNINDTYGHLTGDTVLQEFTQIIMQQCRRSDLVARFGGEEFIILLPETPLK 792 Query: 389 ETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRR 448 AER+ R++ + ++ S G A D L++ AD ALY AK+ Sbjct: 793 GGTIVAERMCQRIDAHIFQEVE----HITASFGVASLITDRDGRELLRRADSALYQAKKN 848 Query: 449 GRNRVEL 455 GRN+V + Sbjct: 849 GRNQVVV 855 >UniRef50_A4BIU7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BIU7_9GAMM Length = 318 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 8/246 (3%) Query: 208 SSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVK 267 + + L F W F + ++ + + F + T + N ++ V Sbjct: 75 TVIQLRNRAFTTWEQRAYVFKFRNNRPITGVTEYMYQ-NCTFIPVIGTTGKVQNLAVIVY 133 Query: 268 FLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 + I + ++ + + D LT+L NR + + E R L Sbjct: 134 DVTDIATSKLEL-----KAANDRLAQLSRTDGLTQLYNRAYWEEMLSNEFKRQKRHAHDL 188 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 S+++ D+D FK++NDT+GH GD+++R V++ N R++D RYGG+EF ++L ++ Sbjct: 189 SLIMFDIDHFKKVNDTYGHQVGDDVIRAVAEEVRHNSRNTDIAGRYGGEEFALLLIDSDA 248 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAK 446 L AER+R +E ++ GE + +++S+G A + Y I+ AD+ALY +K Sbjct: 249 ENALLFAERLRKAIENRRVSTPEGE-LQVTVSLGVAPWKESFHHYNAWIEAADKALYTSK 307 Query: 447 RRGRNR 452 GRNR Sbjct: 308 DEGRNR 313 >UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VE2_RHOFD Length = 398 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 75/342 (21%), Positives = 142/342 (41%), Gaps = 14/342 (4%) Query: 118 ILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIF-SLLE 176 + + + ++ + F + + V A T + +F L+ Sbjct: 63 ACAVTLQFRHWLRSGRVVLARFGMVIFGL---VFITAVTADIGTIRTPTAAILLFWVLMT 119 Query: 177 NAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVG 236 ++ + ++ + ++ I+ ++ P W F+ Sbjct: 120 GLIFDRRGIVIGTIAASMAVLGLIVAENAGWLRPPFYDVGVTQWVTFTALFGFT-SGLTY 178 Query: 237 HISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVG 296 +I++ + + + + + L +R Q + + Sbjct: 179 YINQGTKSALALARKEIEQRKQAEQSLKAANEELHLRVFEVQ-------RLQVELHEQAI 231 Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 D LT L NRR+L REI A R + L+ ++ D+D FK +ND++GH GDE+L +V Sbjct: 232 HDPLTGLYNRRYLSDALAREIIQAKRANSSLTFVMADIDHFKFVNDSYGHLAGDEVLVQV 291 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416 + + R SD RYGG+EF++V S + AE I+ ++ G++IA+ Sbjct: 292 ASLLKKHARGSDIACRYGGEEFLLVFPGTSLELAHKRAEEIQQNCAALSIQH-EGKNIAV 350 Query: 417 SLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWK 457 LS G A + H +E++I AD+ALY +K GRN+V +++ Sbjct: 351 MLSFGVAAYPDHGQQWEQIIVKADKALYQSKCNGRNQVTIFR 392 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 121/241 (50%), Gaps = 10/241 (4%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLR---VKFLLQIRNTVSQII 280 +G +F I + +I ++ +T+ + + N +R I + + Sbjct: 324 RGEGFFQLIDDPDYIRTFLETGGFEMPETVVYKQRVLNLYVRSIKDDHGEPIGSAALILD 383 Query: 281 TLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEI 340 + E+ R D LTKL+NRR + + E+ A R G LS+L++DVD FK+ Sbjct: 384 VTDEKRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNLSILLLDVDHFKKF 443 Query: 341 NDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 NDT+GH GD +L ++ R+ DY RYGG+EF ++L + ++ A+R+R R Sbjct: 444 NDTYGHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDADGAIKVADRLRER 503 Query: 401 VEKTKLKAANGEDIALSLSIGAAMFNGH--PDYERLIQIADEALYIAKRRGRNRVELWKA 458 V + ++ + + +++SIG A + + +++ AD ALY+AK +GRN+V Sbjct: 504 VAEKEV-----DGLRVTISIGVASYPDLSITRPDAMVRAADSALYVAKEQGRNKVVYASE 558 Query: 459 S 459 + Sbjct: 559 A 559 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 4/225 (1%) Query: 237 HISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEV---SRH 293 ++SR I D + + N +++ L+ E+ Sbjct: 205 YLSRSITDPLQTLAKGVEKLGQGELHHRITLETQDEFNHLAETFNLMANQLEQSQQDLYR 264 Query: 294 EVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEIL 353 +D LT++ NRR EI + R P+S++++D+D FK +NDT+GH GD L Sbjct: 265 LATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFKRLNDTYGHQAGDLAL 324 Query: 354 RKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGED 413 +V+Q VR D V RYGG+EF ++L +A+ ++ AERIR + + + + + Sbjct: 325 CEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIRLAIAEKSVVLPSQQH 384 Query: 414 IALSLSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGRNRVELWK 457 I ++ S+G A + H D ERL++ AD+ALY AK +GRNRV + Sbjct: 385 IDMTASLGVATYPDHADCKERLVKQADQALYTAKYQGRNRVHSAE 429 >UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZN3_9GAMM Length = 395 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 67/175 (38%), Positives = 97/175 (55%), Gaps = 2/175 (1%) Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 E R D LT L NRR L F E+A A RTG LSV ++D+D FK+IND GH Sbjct: 215 EAQVRAMAVQDPLTGLSNRRALFDQFAHEMARARRTGEALSVCVMDLDHFKQINDRHGHA 274 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GD +L +V+ + +R +D + R GG+EF++VL + + ER R+ + T + Sbjct: 275 AGDTVLVRVANLLRECLRETDRIGRIGGEEFVLVLPDTGHEGAEKVIERCRAALVGTPVM 334 Query: 408 AANGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWKASL 460 GE + +S S G +L+ AD+ALY+AK+RGRNRVE W +++ Sbjct: 335 LDVGEPLTVSASFGVVTALAGEQATESQLVSRADDALYLAKKRGRNRVEFWSSAM 389 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 2/174 (1%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ E R DVLT + NRR + + E+ A R G PL L++D+D FK IND Sbjct: 405 ERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDIDHFKRIND 464 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 T GH GD ++ ++ +R D + R GG+EF IVLTE + L AER+R V Sbjct: 465 THGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVAERLRQAVA 524 Query: 403 KTKLKAANGEDIALSLSIGAAM-FNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 ++ A G +A + SIG A G + ++ AD ALY AKR GRN+V + Sbjct: 525 AIRIPAELGT-VAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNKVAV 577 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 5/171 (2%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 D LT L NRR + + E+ A R P ++L+ D+D FK+INDT+ Sbjct: 190 RRHYAQMHQMAHTDALTNLTNRRAMQQKLEGELDRARRYNRPFALLLADLDHFKQINDTY 249 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH+ GD++LR+V+ ++R SD + R+GG+EF+I+ E + A+R+ + ++ Sbjct: 250 GHSVGDQVLREVAGRLAQHLRESDSLARWGGEEFLILAPETDLQQAYLLAQRLLGAIRES 309 Query: 405 KLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + + ++LS+G A + L+ ADEA+Y AK GRN++ L Sbjct: 310 PIS-----GVQVTLSLGVACYRQGDSIAALLSRADEAMYRAKAGGRNQIVL 355 >UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEH9_DESAH Length = 341 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 7/217 (3%) Query: 241 LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHE---VGM 297 + D + + + L+Q+ + Q + E+ +R + Sbjct: 121 INDDMLLTIRGAITAYEQETLLDRQNRELIQLNQALEQKVMERTRELEKKNRELEQIAII 180 Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT L NRR L + RE+ + R G ++++D+D FK +NDT GH GD++L++ + Sbjct: 181 DQLTGLFNRRKLDEMLSRELIRSRRYGNSFGLIMVDIDFFKTVNDTHGHQIGDQVLQRFA 240 Query: 358 QAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALS 417 VR D + R+GG+EF+I+ E ++ + AE++R V+ + + + Sbjct: 241 DQLKQGVREVDVLGRWGGEEFLIICPETIKDYLILLAEKLRIAVQSIAVPGVGEK----T 296 Query: 418 LSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 S G ++ + + L+ D+ALY+AK +GRNRVE Sbjct: 297 ASFGVTVYEKGDNLDTLVDKVDKALYLAKEKGRNRVE 333 >UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clostridium thermocellum RepID=A3DHG2_CLOTH Length = 415 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 5/235 (2%) Query: 229 FSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLR-VKFLLQIRNTVSQIITLLRELF 287 +I I + + +++ N + + +I+ R L Sbjct: 181 LPEHKSGSYICLPITEGNITLGILQLYSKSKNYFDEALISKVKSYIEVAKPVISSKRTLH 240 Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 + R D LTKL NRRFL ++ + LSV+++D+D FK INDT+GHN Sbjct: 241 Q--LRKNATTDKLTKLYNRRFLEQYLDNQLEITGFSNQKLSVIMMDIDNFKRINDTYGHN 298 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GD +L ++ +R +D V RYGG+EFI +L + AERIR + + Sbjct: 299 AGDAVLVTFARVILRCLRQTDLVARYGGEEFIAILPSSDTKNAYDIAERIRESIAAEPMP 358 Query: 408 AANGEDIA-LSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKASL 460 N + +S S G + + H + LI+ AD ALY AK+ G+NRV + + Sbjct: 359 KINDVQLPNISCSFGVSTYPTHAKNKNDLIKAADIALYKAKQAGKNRVITYSEGM 413 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 31/279 (11%) Query: 208 SSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRL---------IQDFDGIFNQTMRNTRN 258 + ++ + + F ++ + +G + I + F FN+ + + Sbjct: 181 DPIMITDCNATIVFANEAFQHITGYSASEIIGENPRVLSSGKHDEMFYAQFNEALASGTP 240 Query: 259 LNN-------------RSLRVKFLLQIRNTVSQIITL-----LRELFEEVSRHEVGMDVL 300 + L + T++ +++ R E+ D L Sbjct: 241 FRTTFINKRKDGSLFYAEHSISPLCNLEGTITHYVSISQDVTTRLGREQKLLEIAHSDPL 300 Query: 301 TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 T L NRR +R I A +G P S++I D+D FK +ND +GH GD +L V+ Sbjct: 301 TGLNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGHPAGDRVLTSVAVIL 360 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 +R D R+GG+EF+I++ ++S + A+RIR VE + ++++S+ Sbjct: 361 KQRIRLQDVAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLLIPNTG----SVTISL 416 Query: 421 GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 G A + LIQ AD+ALY AKRRGRNRV++ +A Sbjct: 417 GVAQLSPGETAASLIQRADKALYQAKRRGRNRVDIAQAD 455 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 66/177 (37%), Positives = 96/177 (54%), Gaps = 2/177 (1%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ E D LT L NRR + + E A R +P+++L++D+D FK IND Sbjct: 345 ERKEAESRLLQMAATDELTGLYNRRRFFELARGEFNRAKRYSSPMTILLLDIDYFKRIND 404 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH+ GD LR + +RS D + R GG+EF+ +L E + + R AERIRS +E Sbjct: 405 EYGHDAGDTALRCIVSMIASQLRSLDVLARLGGEEFVALLPETHQFDAERIAERIRSEIE 464 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWKA 458 T + + +++SIG A ++ D LI ADEA+Y AKR GRN+V L Sbjct: 465 STAINLFE-TTLFVTVSIGVAGYSKEMQDVGELINRADEAMYRAKRDGRNQVCLATP 520 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 2/170 (1%) Query: 288 EEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHN 347 + +D LT + NRR+ +R++ + PLS++++DVD FK NDT GH Sbjct: 149 QRKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTHGHQ 208 Query: 348 TGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLK 407 GDE L ++ ++R D RYGG+EF +VL + AER+R+ VE ++K Sbjct: 209 GGDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEALEIK 268 Query: 408 AANGEDIA-LSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVEL 455 G ++ +++S+G A +G LI AD ALY AK +GRNRV + Sbjct: 269 DDEGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVV 318 >UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NJD1_9DELT Length = 469 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 75/346 (21%), Positives = 136/346 (39%), Gaps = 11/346 (3%) Query: 112 FRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRI 171 R + ++ + + ++ + E + RA + ++ E +I Sbjct: 126 ARKISDDMWQLREHRRAEEQHRRELESLNSQLE----EAVARANEMAAEASRAYIEINQI 181 Query: 172 FSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSG 231 F + + Q + + ++ S + F + Sbjct: 182 FKTVAGGIFLADTQFNMLRF--NEAFQRMTGFSTVKVENAKCYEVFHSQHCGTPQCPIQL 239 Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLR-----EL 286 I + + +G + LL I ++ I + + + Sbjct: 240 IKQGEQQVEFDIEREGAGGEIFHYHVLATPFKGPAGDLLGIVEHITDITSRVLAEQALQK 299 Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 E+ + +D LT L N+R+ + E+ A R PLS+LI+D+D FK NDT+GH Sbjct: 300 SEQRYKELSIVDELTGLFNKRYFNKHLRLEVERARRYQHPLSLLIMDIDNFKHYNDTYGH 359 Query: 347 NTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKL 406 GD +L + D++R +D R+GG+EF+++L L+ AER+R R + Sbjct: 360 PAGDRVLSALGGMLRDSMRLNDLACRFGGEEFVVILPMTDGETGLKLAERLRERFAALEF 419 Query: 407 KAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNR 452 + G I ++S+G A F E L+ AD+ LY AK GR+R Sbjct: 420 QPLEGVVIRKTMSVGVAQFEDEESPESLLARADKNLYAAKAAGRDR 465 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 113/214 (52%), Gaps = 4/214 (1%) Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRF 308 F + ++ R R + LL+ ++ + + E ++ R + D LT L NRR+ Sbjct: 142 FQRNLQLRRVREELRTREQELLKANQSLVVNLQEI-EALQQQLREQASRDSLTALYNRRY 200 Query: 309 LPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV-RSS 367 L T RE+A R G PLS+++IDVD FK+ ND GH GD+ L V++ + R+S Sbjct: 201 LDTTLDRELASCKREGKPLSLIMIDVDDFKKYNDLHGHQAGDQCLIAVAKTLQASAKRAS 260 Query: 368 DYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMF-- 425 D RYGG+EF++VL AE +R VE K+ ++++SIG A+ Sbjct: 261 DLAARYGGEEFLLVLPGMDATAAQGLAEELRRSVEALKIPHEQSRGGSVTISIGLAVMTN 320 Query: 426 NGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + H D L++ ADEALY AK GRN+V L + Sbjct: 321 DSHKDVAGLLRAADEALYHAKHGGRNQVRLATQT 354 >UniRef50_Q089K4 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q089K4_SHEFN Length = 312 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 114/256 (44%), Gaps = 11/256 (4%) Query: 200 ILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNL 259 + + + ++ DF W + + +++ D + + TR Sbjct: 60 LRHAWETKQGVIINTDDFEQWLEN-----LHKLHSEKALNQYETDLSD--GRWFKMTRIN 112 Query: 260 NNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAH 319 + + I N +L E + V D LT + NRR + K+E A Sbjct: 113 LDSGYTIIMGADITNLKQAQTSL--EQAHQQIESLVNTDQLTGMHNRRSYNQLAKQECAR 170 Query: 320 ANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFI 379 A R LS+L+ID+D FK IND +GH+ GD IL++ +Q D +R SD + R GG+EF Sbjct: 171 AIRFNQQLSLLVIDIDYFKVINDNFGHDGGDSILKQFAQICSDLLRQSDSLSRIGGEEFT 230 Query: 380 IVLTEASENETLRTAERIRSRVEKTKLKAAN-GEDIALSLSIGAAMFNGHPD-YERLIQI 437 I+L + AERIR + K +I +++SIG + + L Sbjct: 231 IILPMTDGEGAMIIAERIREHIAKHSFHTTQTNNNINVTVSIGVSSLTAGDKVIQDLFSR 290 Query: 438 ADEALYIAKRRGRNRV 453 AD A+Y AKR GRN+V Sbjct: 291 ADMAMYCAKRGGRNQV 306 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 3/217 (1%) Query: 243 QDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTK 302 D G+ + + + + + E R++ D LT Sbjct: 486 NDIYGLLYMEVSEEPAGAFSQNQQLLITAFSELTA--LAFANVRLRENLRYQSMRDPLTG 543 Query: 303 LLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYD 362 L NRR+L ++I + RT +P+S+L++D+D FK+INDT+GH+ GD L+++ + + Sbjct: 544 LYNRRYLEDFLLKQIHQSERTKSPISLLMLDLDHFKKINDTYGHDAGDVALKELGKILQE 603 Query: 363 NVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGA 422 ++R D RYGG+EFI+ E AE IR V + ++K +++SIG Sbjct: 604 DIRVGDIAARYGGEEFIVAFYNTDEKTIKTRAESIREAVSRLQVKYGAQPVGPITVSIGV 663 Query: 423 AMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKA 458 A++ + LI+ AD+ALY AK G+NR+ L+ Sbjct: 664 AVYPTDGRNTNELIESADKALYFAKTNGKNRIVLYSE 700 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 4/170 (2%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + EE R D LT + NRR+ + EI A R G+ S++++D+D+FK IND + Sbjct: 382 KKMEEELRQLSVTDSLTNVYNRRYFVQKLEEEIERAKRAGSKFSLVMLDIDRFKSINDRF 441 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GHN GD +L+ +++ + +R D + R+GG+EF+++L E + N+ + E +R + + Sbjct: 442 GHNAGDLVLKSMAEMIKNRIRKIDTLARWGGEEFVMLLPETTVNKAVVLVEELRESLSQM 501 Query: 405 KLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + ++ S G + + L+Q D +Y AK GRN V Sbjct: 502 DIPGVG----RVTASFGVVGYCPGDTIDTLMQRVDALMYEAKAAGRNCVR 547 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 102/189 (53%), Gaps = 4/189 (2%) Query: 270 LQIRNTVSQI--ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 L++ N + Q I + + +D LT + NR + + E A+A + L Sbjct: 361 LRLLNIIGQQVGIAMENVELYQRMHEMATIDSLTGIYNRLYFQERLREEFANAKKENYDL 420 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 S+ I+D+D FK NDT+GH GD++L+ ++ ++RS D + RYGG+EF+I+L S Sbjct: 421 SLAIMDIDHFKRFNDTFGHLFGDKVLKHIAHLMKKSLRSGDIIARYGGEEFVILLPRTSV 480 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAK 446 E ER+R+ V KT +K + ++++S G + + + E L++ AD ALY AK Sbjct: 481 KEAYDKVERLRNIVAKTTIK-DELVEASVTVSFGVSSYPEFANTESELLKTADNALYDAK 539 Query: 447 RRGRNRVEL 455 GRN V + Sbjct: 540 ESGRNCVRI 548 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 66/172 (38%), Positives = 91/172 (52%), Gaps = 2/172 (1%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 E D +T + NRR T+ RE A A R G PLS L+ID+D FK IND +G Sbjct: 156 RNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDIDHFKSINDDFG 215 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD+++ +++ D R D + R GG+EF ++L E + L AER+R V + Sbjct: 216 HQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVAERLRGEVAASS 275 Query: 406 LKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELW 456 L A+G + ++SIGAA L++ AD ALY AK GRNRV Sbjct: 276 LLMASG-SVRATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNRVVCH 326 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 12/319 (3%) Query: 140 SINSIDIAMEVMTR-AFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIY 198 I A+++ + + + K E + S + +++ ++ Sbjct: 113 ITRIIVTAIDITAKKQLEDALKMSRKRFEAV-VNSAYDGIISVSSESRIELINTAACEMF 171 Query: 199 KI---LLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRN 255 + + L + LPL + FS G+ Sbjct: 172 GVDESYVGKRLETLLPLR----FRSNHESYFRAFSNSPINSRPMHARASVMGLRRDGSEF 227 Query: 256 TRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKR 315 + + + + ++ + I R E + D LT + NRR + K+ Sbjct: 228 PQEVTIAKINLGQTTEMTAILRDISE--RARLVEELKVAATTDPLTGIANRRRFDELVKQ 285 Query: 316 EIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGG 375 E+ R G +S+L++D+D FK++NDT GH GD+ + + + +R D + R+GG Sbjct: 286 EVQRCQRFGHTMSLLLLDIDHFKQVNDTHGHQQGDQAILSLVRRIAKQLREVDILGRWGG 345 Query: 376 DEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN-GHPDYERL 434 +EFII+L E S + +AERIR + +I L++SIG + + + + Sbjct: 346 EEFIILLPETSLDLAWASAERIRLAIASESHPLGADIEIPLTVSIGISASQGPQDNVDNM 405 Query: 435 IQIADEALYIAKRRGRNRV 453 ++ AD ALY+AK++GRN Sbjct: 406 VRRADTALYLAKKQGRNCC 424 >UniRef50_C6C1P7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1P7_DESAD Length = 383 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%) Query: 239 SRLIQDFDGIFNQTMRNTRNLNNRSLRVKF---LLQIRNTVSQIITLLRELFEEVSRHEV 295 LI++ + N L + L++ + + EE ++ Sbjct: 161 EELIEELMEVKELQEDNAAQLATLLHELDEKNYALELEIAERKKAEQKLKESEERFKNLS 220 Query: 296 GMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRK 355 D LT L NRR + + ++EI + TG PLS++++DVD FK NDT+GH GD+IL Sbjct: 221 ITDQLTGLFNRRHMLDVAEKEIFKSRNTGHPLSIMLMDVDDFKMFNDTYGHAAGDDILEA 280 Query: 356 VSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA 415 + + +N+R++D FRYGG+EF+++L E + E ++ AE IR + + + G I Sbjct: 281 IGKIIKNNIRATDKAFRYGGEEFMVILPETNGLEAIKVAENIRIALAEYEYHPKEGSPIH 340 Query: 416 LSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 ++SIG A F E++I+ AD+ +Y K +G+NRV Sbjct: 341 KTISIGVAEFTNDESLEKVIKRADDNMYRCKIKGKNRV 378 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 6/239 (2%) Query: 220 WFNHKGRHYFSGIAEVGHISR-LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQ 278 ++ ++G I+ +Q+ +F + N S L ++ N Q Sbjct: 304 EMGNRKTAALIKHPQLGSIAVVPLQNRRDVFGYLVIVAPKGQNYS--HSQLRRLENISGQ 361 Query: 279 I-ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKF 337 + + + + D LT L NRR+ E + R +++++D+D F Sbjct: 362 VALAVYNGYLYLRLKELAQKDELTGLYNRRYFLERLNEEHLRSRRHKLNYTIVLLDIDYF 421 Query: 338 KEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERI 397 K+INDT+GH+ GD +L + D +R +D RYGG+EF+++L + + E AER+ Sbjct: 422 KKINDTYGHDCGDLVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQTGKKEAYLLAERL 481 Query: 398 RSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVEL 455 R +V K ++ G+ + ++S+G A + +Y L+ +AD+ALY AK RGR++V + Sbjct: 482 REKV-KERVLIFQGQKVKYTVSMGLAAYPEDAEEYRELLSLADKALYQAKNRGRDKVVM 539 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 7/235 (2%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLL 283 K Y + + ++ + Q IF L V F V + + Sbjct: 259 KRTFYAAPVPQLPLVVATGQSIRDIFLPWRYRVLVGTAAVLTVGFASIAIALVLRHDLMR 318 Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R + D LT + NRR + RE A R G+P++VL+ID+D+FK +ND Sbjct: 319 RSRLQAELLQLSLTDDLTGIANRRRFFDVAIREWQRAQRLGSPVAVLMIDIDRFKLLNDR 378 Query: 344 WGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 GH GD +L+ ++Q ++ R +D RYGG+EF +L + +TAERIR++VE Sbjct: 379 LGHAAGDAVLQAIAQLIRHSLRRPADLAARYGGEEFTAILPDTDMAGAFQTAERIRTQVE 438 Query: 403 KTKLKAANGEDIALSLSIGAAM--FNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + ++ + +++SIG A + + +E ++ AD ALY AK GRNRV + Sbjct: 439 RDVIRGDH----PVTVSIGIAAAIASPNETFENVVAAADRALYRAKESGRNRVMV 489 >UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXG9_HALOH Length = 499 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 17/261 (6%) Query: 196 IIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRN 255 I K+ D DL +PL + G + G +G I+ + + Sbjct: 256 IAGKVSFDDDLSKIIPLDNIEEGKEIEYIIVPVTRGKELIGSIN-------------IFS 302 Query: 256 TRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKR 315 + L+ FL N S + L L + D LT L N + Sbjct: 303 MDKGHLPILQHSFLESFANQFS--VALQNALLYKKQEEMANRDGLTGLYNHAYFQNRLHL 360 Query: 316 EIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGG 375 + PL+++I+D+D FK++ND +GH GD++L++++ N+R D + RYGG Sbjct: 361 LLK--QENKHPLTLIIMDIDNFKQVNDRFGHLVGDKVLKELAHLLKHNLREGDLIARYGG 418 Query: 376 DEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLI 435 +EF I+L E + A+R+R + ++ N + +++SIG A +N E I Sbjct: 419 EEFAIILPETELKQGEFIAKRLRKLISDNEIVLDNNRSLYITVSIGVAQYNKKWSQEEFI 478 Query: 436 QIADEALYIAKRRGRNRVELW 456 AD+ALY AK G+NRV L Sbjct: 479 DKADQALYKAKEAGKNRVTLA 499 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 65/173 (37%), Positives = 92/173 (53%), Gaps = 2/173 (1%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ E RH D LT LNRR ++E+ A+R G +SVL+ID+D FK++ND Sbjct: 303 ERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDIDHFKQVND 362 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 GH GD+ L+ + A N+R D R GG+EF +L E + L AER+R VE Sbjct: 363 RHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVAERLRQAVE 422 Query: 403 KTKLKAANGE-DIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRV 453 L + + + L+ S+G A ++++ AD ALY AK GRNRV Sbjct: 423 AIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEGRNRV 475 >UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas RepID=Q2P4J7_XANOM Length = 569 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 1/195 (0%) Query: 267 KFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTP 326 + + + L E R + D LT L NRR+L E+A R G P Sbjct: 371 RLEIAEAAAEQLSLALSNLRLRESLRRQSIRDALTGLYNRRYLEESLSHELARCARRGLP 430 Query: 327 LSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEAS 386 LSVL++DVD FK+ ND+ GH GD +L V + +R+ D RYGG+EF ++L EA Sbjct: 431 LSVLMLDVDHFKQFNDSQGHAGGDLLLAAVGELLLTRLRTEDVACRYGGEEFTVLLPEAD 490 Query: 387 ENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIA 445 E LR AE+IR + + ++ SIG A F LIQ AD ALY A Sbjct: 491 GEEALRVAEQIRGYIAALAVSDEARALPKVTASIGVASFPADGEQGASLIQKADAALYRA 550 Query: 446 KRRGRNRVELWKASL 460 K RGRNRVE A + Sbjct: 551 KHRGRNRVERHGAVM 565 >UniRef50_A1HRZ7 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRZ7_9FIRM Length = 794 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 71/219 (32%), Positives = 103/219 (47%), Gaps = 7/219 (3%) Query: 246 DGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLN 305 + + R + + L + + D LT L N Sbjct: 573 HRLLGVIILGWRGFVAPDRLERLPFAALMAQQIALGLEKANLYNQVKAMALSDGLTGLAN 632 Query: 306 RRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVR 365 RR K E+ + PLS+++ D+DKFK NDT+GH TGD++L ++ + NVR Sbjct: 633 RRNFDMFLKAELRRSFTLKRPLSLIMFDLDKFKTYNDTYGHLTGDKLLAQIGEILRHNVR 692 Query: 366 SSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE-DIALSLSIGAAM 424 S D RYGG+EF I+L E + E L AE++R VE+T G ++ S+G A Sbjct: 693 SIDLPARYGGEEFSIILPECTNAEALAIAEKLRQIVEETHFPDNLGAFTARITASLGVAT 752 Query: 425 FNGH------PDYERLIQIADEALYIAKRRGRNRVELWK 457 ++ PD E LI AD+ALY AK++GRNRV Sbjct: 753 YDPAITSGGVPDMEDLIAWADKALYQAKQQGRNRVVNAA 791 >UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW86_DESAD Length = 555 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 65/175 (37%), Positives = 99/175 (56%), Gaps = 6/175 (3%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 + + D LT L NRR+L R + A R G P S++I+D+D FK INDT+GH Sbjct: 370 QELQKSAVTDQLTGLPNRRYLMKEGTRLVDIAIRAGQPCSLMIMDIDHFKVINDTYGHTV 429 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD +L+++S+AF + VRSSD + RYGG+EF++V + + AER+R VE Sbjct: 430 GDIVLQQISKAFQEVVRSSDIIARYGGEEFVVVAPGSDIDSGRTLAERLRQSVEARIFN- 488 Query: 409 ANGEDIALSLSIGAAMFNGH-----PDYERLIQIADEALYIAKRRGRNRVELWKA 458 + + + ++SIG + + YE ++ AD ALY AK GRNR+ + + Sbjct: 489 NDEQPLTCTISIGVSHYATDIKFGVDAYEDMLARADNALYKAKDTGRNRICIAEP 543 >UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4Y784_SHEPC Length = 368 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 5/236 (2%) Query: 223 HKGRHYFSGI-AEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 ++G FSG AE G + D + + + + + + + Q N + Q + Sbjct: 133 NQGTADFSGTLAEFGIKLQSNSDINTLNQLVDGVMDEMQSLLINNQNMEQSLNAMGQEVQ 192 Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 L+ E D LT L NRR + I A + S+LI+D+D+FK+ N Sbjct: 193 HLKSEMEN-LSLAAMTDQLTSLYNRRAYEIAIQDHIHRAQEQHSRCSLLIVDIDRFKQFN 251 Query: 342 DTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRV 401 DT+GH GD++L V+ A VR D+V RYGG+EF+++L ++ L+ AE +R R+ Sbjct: 252 DTYGHQIGDKVLAYVALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRERI 311 Query: 402 EKTKLKAANGEDIA---LSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 + L + ++ +++SIG A D E L AD+ALY AK GRN V Sbjct: 312 SERHLTIGKDKKLSLGAITVSIGLASLQEGDDAETLFSRADKALYEAKSDGRNCVR 367 >UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID=Q98G89_RHILO Length = 426 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 91/167 (54%), Gaps = 1/167 (0%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 E R + D T L NRR+L RE+ R+G PL+++++DVD FK+ NDT+GH Sbjct: 240 ETLRQQSIRDPNTGLYNRRYLEETSSRELRRMERSGQPLAMIMLDVDHFKQFNDTFGHEA 299 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GD +L++V+ D+ R SD V RYGG+EF +++ S + AE +R +++ L Sbjct: 300 GDLVLKQVAATLLDHARESDVVSRYGGEEFALMMPGTSLADAAERAEALRKAIKQLHLTH 359 Query: 409 ANGEDIALSLSIGAAMFNG-HPDYERLIQIADEALYIAKRRGRNRVE 454 ++ S G + F + ++ AD +LY AK GR+RV Sbjct: 360 RGRTLGTITASFGVSAFPELGASWVEIVNAADRSLYQAKADGRDRVV 406 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 72/167 (43%), Positives = 97/167 (58%), Gaps = 5/167 (2%) Query: 289 EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNT 348 R D LT NRR + I +EI + R G PLSVL IDVD FKE+NDT+GH + Sbjct: 121 RELRFLADTDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDNFKELNDTYGHKS 180 Query: 349 GDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKA 408 GDE+LRK+++ +R +DYV R+GG+EF+++L E LR AERIR RVE+ K Sbjct: 181 GDEVLRKIAEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAERIRKRVEREDFKT 240 Query: 409 ANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 +++S+G D L D A+Y+AK RG+NR EL Sbjct: 241 G-----KVTVSVGVTELKEGDDLNTLFNRVDRAMYLAKERGKNRSEL 282 >UniRef50_C1SP72 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP72_9BACT Length = 643 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 27/276 (9%) Query: 198 YKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTR 257 + L + ++ + F ++F + IS I Sbjct: 379 FSYTLGKIVVVAIFIMSLMFYIYFRKRSEKL------ANMISAPIVSLSENTKYIGSEFM 432 Query: 258 NLNNRSLRVKFLLQIRNTVSQIITLLRELFEEV----------------SRHEVGMDVLT 301 + +++ L Q+ ++ L + ++ D LT Sbjct: 433 AFDYEDSQIEELQQLNINFDEMTNELEQRTRDLIHAEVEKLEKEKEAERLLLMSITDPLT 492 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 KL NR + I EI A R G SVLI D+D FK++ND +GH TGDE+L+ +++ Sbjct: 493 KLYNRIKVDEILDYEIEQAGRYGKDFSVLISDIDHFKDVNDNFGHQTGDEVLKIIAELLN 552 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 DN RSSD V R+GG+EF+I+ T + AE++R+++E ++ S G Sbjct: 553 DNTRSSDTVARWGGEEFLIIFTNTPLEDAATIAEKLRTKIESYDFPVGR----TVTASFG 608 Query: 422 AAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 A + E I+ AD+ALY AK + RN V + + Sbjct: 609 VAQYVNGEQKEHFIKRADDALYAAKNKSRN-VVVAR 643 >UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8W9_ALHEH Length = 302 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 4/180 (2%) Query: 276 VSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335 VS I +R+ E H+ D LT L+NR + REI R G +++++D+D Sbjct: 126 VSAIDLSVRKALEAQLHHQANHDPLTGLVNRYHFEELLAREIERGQRYGGGFALIMLDID 185 Query: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAE 395 FK +NDT+GH GD++LR+ ++ +R++D + R+GG+EF+++L AE Sbjct: 186 HFKAVNDTYGHLEGDKVLRRFAEELTGKIRAADTLARWGGEEFMLLLPGTDIAGARALAE 245 Query: 396 RIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 IR V ++ +++S+G + L++ DEALY AK GR++V + Sbjct: 246 AIRVAVNGCRMPVPG----QVTVSLGVTGYRNGESVWGLLKRVDEALYAAKLAGRDQVVV 301 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 83/269 (30%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 192 WEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQ 251 W+ I+ + S L + FGL I + G Sbjct: 128 WKRTIVVDDIQTSPLWAHALHKVQPFGL-----------RACWSMPIFSSDRQLLGTLAT 176 Query: 252 TMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPT 311 R R+ + L + R T I L R+ E+ D LT+L NRR Sbjct: 177 YYREPRSPSQEELALAQ----RITRIIAIALQRDGHEKQLYRLATQDGLTELNNRRQFIE 232 Query: 312 IFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVF 371 + REI + R G+ +SVL++D+D FK+IND +GH GDE++R SQ + +R+SD Sbjct: 233 LADREIERSRRHGSRMSVLMMDLDHFKDINDHYGHAVGDEVIRHFSQVCREVLRASDLCG 292 Query: 372 RYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-D 430 R GG+EF VL + ++ + AER+RS +L A +G + ++SIG A + D Sbjct: 293 RLGGEEFAAVLPDTGLDDARQVAERLRSLASSARLSAVSG-SLGYTVSIGVAERHADETD 351 Query: 431 YERLIQIADEALYIAKRRGRNRVELWKAS 459 + ++ AD+ LY AKR GRNRV + Sbjct: 352 IDEVLGRADKQLYQAKRDGRNRVSGAAPA 380 >UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepID=C5UZW0_9PROT Length = 599 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 12/286 (4%) Query: 175 LENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAE 234 L A ++ S++ + + + D + +S D+ SG +E Sbjct: 323 LREAIIKQGLLKKSLVDAKSTLKSLMTTFIDRLGIITVSTGDY--------HQKISGYSE 374 Query: 235 VGHISRLIQDFDGIFNQTMRNTRNLNNRSLR-VKFLLQIRNTVSQIITLLRELFEEVSR- 292 S + D + + M++TR + +L+ + LL R V + +L +E+S Sbjct: 375 KIAQSSNLNDLGHLLDDIMQDTRVIQASALKSHEELLDSRKQVESAEEKISKLEKELSEV 434 Query: 293 -HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 V D LT LNRR L F RE +R+ L + ++D+D FK +NDT GH GD+ Sbjct: 435 SELVHQDQLTGALNRRGLDAAFDRESRRVDRSHESLCIALLDIDNFKRLNDTMGHQVGDK 494 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 L + + +R SD V RYGG+EF+++L + + E T ER++ + K N Sbjct: 495 ALIHLCHVIKEALRPSDSVARYGGEEFVLILPDVTLAEAALTVERLQRELTKQFFMHEND 554 Query: 412 EDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 I ++ S G A + E LI AD+A+Y AK+ G+NRV + Sbjct: 555 R-ILVTFSAGVAQLAPNESQEELIGRADKAMYQAKQTGKNRVVVAN 599 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 5/214 (2%) Query: 245 FDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLL 304 Q + +L + + + + + + + D LT+LL Sbjct: 280 VRRTREQELFGPADLEFAQAVITAAVAVIQRAQMVESTMAD--NARLEQLAQTDPLTQLL 337 Query: 305 NRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNV 364 NRR L E+ A R + L++L+ID+D FK++NDT+GH GD++LR V Q + Sbjct: 338 NRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVGDDVLRDVGQLLGHTI 397 Query: 365 RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN-GEDIALSLSIGAA 423 R SD RYGG+EF+++L E + + AERIR +E+ + E + L+ SIG A Sbjct: 398 RGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFARDSMAEPLKLTASIGVA 457 Query: 424 MFNGH--PDYERLIQIADEALYIAKRRGRNRVEL 455 +F + E L AD ALY AK GRNRV + Sbjct: 458 VFPAARIENVEDLFARADAALYRAKAEGRNRVRM 491 >UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=C4RZH3_YERBE Length = 431 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 73/232 (31%), Positives = 106/232 (45%), Gaps = 4/232 (1%) Query: 225 GRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLR 284 GR + EV + + + I NTR++ + V+ + Sbjct: 204 GRDVLPVMNEVARLPGGHKPLNFIHKLADGNTRHVQTYAGPVELDGVRLMLCIIHDITEQ 263 Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + E+ H D LT L NRR + + A + R G S++++DVD FK IND Sbjct: 264 KRLEQALEHAALRDPLTDLGNRRQFFPLVEHAHAQSQRYGHCFSLILLDVDHFKSINDQL 323 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GHN GDE+L +++ +R SD VFR+GG+EF I+L L+ AE IR ++ Sbjct: 324 GHNKGDEVLILLARTLESIIRESDSVFRWGGEEFTILLPLTHLEGALQLAESIRETIQ-- 381 Query: 405 KLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 L++SIG A D + L + DEALY AK GRNRV Sbjct: 382 --MICQPNLPQLTVSIGVAQHQSGEDTDSLFKRMDEALYRAKASGRNRVLAA 431 >UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammaproteobacteria RepID=B3PIC1_CELJU Length = 322 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 12/251 (4%) Query: 208 SSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVK 267 + L A F W F + + + IF L N V Sbjct: 78 TVFVLHNATFTTWEQRPYLFRFPHYRPITGTADYMYQNSTIF--------PLVNTKGEVD 129 Query: 268 FLLQIRNTVS--QIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 + I V+ + + ++ + ++ D LT L NR + +E +R + Sbjct: 130 HICVIIYDVTDTAVNKIAQQHANKQLQNLSRTDHLTSLFNRGYWELRLIQEFKRYDRYES 189 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 P S++++D+D FK+IND +GH GDE +R VS+ + VR D RYGG+EF I+LT Sbjct: 190 PSSLIMLDIDHFKKINDNYGHTVGDEAIRCVSRVIKEQVRDLDIAGRYGGEEFGIILTST 249 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYI 444 + + AER+RS +EK + A G +I ++S+G A N H D+ + I+ AD ALY Sbjct: 250 NGDGACVIAERLRSIIEKQTV-YAEGHEIHFTISLGVAELNDHMHDHRQWIEKADHALYK 308 Query: 445 AKRRGRNRVEL 455 +K GRNR L Sbjct: 309 SKESGRNRCTL 319 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 3/202 (1%) Query: 258 NLNNRSLRVKFLLQIRNTVSQIITLL--RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKR 315 +L++ +L V L + V++ + + R + D LT L NRR+L R Sbjct: 379 HLSSPNLAVLERLNLVEVVAEQLAMALHNLHLRHRLRTQSIRDPLTGLYNRRYLEESLLR 438 Query: 316 EIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGG 375 E++ R PL+++++D+D FK +ND +GH GD +L Q VR D RYGG Sbjct: 439 ELSRCARRDLPLALMMLDLDHFKALNDRFGHAGGDALLAAFGQLLGGLVRPEDIACRYGG 498 Query: 376 DEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERL 434 +EF ++L A+ + R AE+IR+ VE+ +++ ++++SIG A + H E L Sbjct: 499 EEFTVILPGAAADVAQRRAEQIRAAVEQMQVQHHGQMLPSITVSIGVAAYPEHGSTGEEL 558 Query: 435 IQIADEALYIAKRRGRNRVELW 456 ++ AD ALY KR GRNRV Sbjct: 559 LRCADAALYCGKRSGRNRVASA 580 >UniRef50_Q2IXE2 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Alphaproteobacteria RepID=Q2IXE2_RHOP2 Length = 457 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 7/261 (2%) Query: 200 ILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNL 259 +++ L + L IA+ + +RL++ + N + + Sbjct: 202 LIVSLGLENFDGLRLCSQARSLERTRHVPILAIADADNNARLLRGLEIGVNDYLLRPVDK 261 Query: 260 NNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAH 319 N R + ++ R + ++ E D LT L NRR++ + Sbjct: 262 NELLARARTQIRRRRYTDHLRDNVQHSIE-----MAITDGLTGLHNRRYMESHLATLAEQ 316 Query: 320 ANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFI 379 A G PL+++I+D+D FK INDT+GH+ GD++LR+ + ++R D RYGG+EF+ Sbjct: 317 AGSRGKPLALMILDIDFFKAINDTYGHDAGDDVLREFAVRIKKSIRGIDLACRYGGEEFV 376 Query: 380 IVLTEASENETLRTAERIRSRVEKTKLKAANG-EDIALSLSIGAAMF-NGHPDYERLIQI 437 IV+ E AER+R + G + IA+++SIG + L++ Sbjct: 377 IVMPETDLQVAQMVAERLRRAIAGEPFAIEKGTKRIAVTISIGLSTLERKGEAVRDLLKR 436 Query: 438 ADEALYIAKRRGRNRVELWKA 458 AD ALY AK GRNRV A Sbjct: 437 ADTALYRAKHDGRNRVVAAAA 457 >UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQK2_CHRVO Length = 585 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 8/229 (3%) Query: 230 SGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEE 289 G E+ +S +++ + R L + + ++ ++ R + L Sbjct: 361 GGTQELRQLSDAMRNMTATL---LARERQLADVNANLEQMVADRTEQLRESNRLLVQKAA 417 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 D LT L NR + E R+G P +VL++DVD FK +NDT GH+ G Sbjct: 418 QLAQLARNDALTGLHNRMAANEQLQEEHLRHGRSGAPYAVLLLDVDHFKRVNDTHGHDAG 477 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +LR ++ R++D+V R+GG+EF+++L E + AE+IR+ VE+++ Sbjct: 478 DRVLRHIADILRRAARATDFVARFGGEEFLLLLPETDADGAAVLAEKIRASVEQSQAPDV 537 Query: 410 NGEDIALSLSIGAAMFNGHPD-YERLIQIADEALYIAKRRGRNRVELWK 457 ++LSIG A E ++ AD+ALY AK GRNRVE Sbjct: 538 G----RVTLSIGLATVVPADSQPEMAVKRADQALYRAKAAGRNRVEAAA 582 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 2/190 (1%) Query: 272 IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 + S + +LL E + ++ D LT+L NRR + +R I + + +L+ Sbjct: 225 LNVRRSFLRSLLDEWNYQTLKNLAHTDDLTQLYNRRHFVDMAERSIHQWPKHASS-CLLM 283 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 DVD FK IND++GH+ GD +L+ +++ +R SD + R+GG+EFI +L + ++L Sbjct: 284 FDVDHFKNINDSYGHDVGDRVLQLIAEVTRKEMRHSDVLARFGGEEFIALLEDTQLQDSL 343 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIADEALYIAKRRGR 450 AERIR ++K + I ++SIG A H E LI+ AD ALY AK+ GR Sbjct: 344 VIAERIRCAIQKQYIYVEPNHTIRFTISIGVAELESHTQPLEDLIKQADIALYQAKKSGR 403 Query: 451 NRVELWKASL 460 NR+E++ + Sbjct: 404 NRIEVYHPDM 413 >UniRef50_A1AK83 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK83_PELPD Length = 304 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 70/173 (40%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L EE + D LT + NR F E A R GTPLS++I D+D FK +NDT+G Sbjct: 133 LAEEALQCAARTDHLTGIANRWEFINRFNTEKGRAERHGTPLSIIIADIDHFKSVNDTFG 192 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 HN GD +LR V+ A ++R D R+GG+EF+++L + + + R AE++R V + Sbjct: 193 HNAGDRVLRSVANAISSSIRVEDACGRWGGEEFMLLLPDTNLDAAARVAEKLRQAVSELS 252 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 + GE IA++LS+G F + IQ D ALY AK GRNRVEL Sbjct: 253 IP-WEGESIAVTLSMGVGQFRPGMTLDECIQPVDHALYRAKTGGRNRVELAAP 304 >UniRef50_B3E3B5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E3B5_GEOLS Length = 669 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 6/227 (2%) Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL--FEE 289 I E+ + + + + V +L + + +EL E Sbjct: 447 IRELVVPVIRDERIVAVLGVGNKGNNYTTRDAEEVAYLADVTWEIIDSRRAQQELKHANE 506 Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 + E +D LT + NRR + E A A R +PLS++++D+D FK+INDT GH G Sbjct: 507 LLATEARIDFLTGIYNRRMFDGLLVAETARACRYNSPLSLIMLDLDHFKQINDTQGHAAG 566 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +L+KV++ +RS D R+GG+EF+I+ + + AE +R +E+ Sbjct: 567 DHVLQKVAELISGRIRSHDIFSRWGGEEFVILTPKNDTAQAAVLAEILRDMIEQYDF--- 623 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 G + L+ S G E I+ AD ALY AK GRNRVE Sbjct: 624 -GNGLRLTCSFGVTRHICGEPAEVFIERADTALYQAKHNGRNRVETA 669 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 16/235 (6%) Query: 220 WFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 WFNH E + + + IF N + I Sbjct: 395 WFNH----VIQNKHEPHYAKVQLNGKEYIFLVKATEISNAYGDQYVSVLMTDITE----- 445 Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 E ++ H + D LT + NR + ++EI R +P S+ +D+D FK Sbjct: 446 ----EEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDIDHFKM 501 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 INDT+GH+ GD +L +++ +RS+D R GG+EF+I++ E S L +ERIRS Sbjct: 502 INDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLENALIISERIRS 561 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVE 454 VE + +++S+G N + + + ADEALY AK GRNR+E Sbjct: 562 TVEGIS---SKDVPEKITISMGLVELNSWDNVQSFYKRADEALYKAKENGRNRIE 613 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 60/174 (34%), Positives = 86/174 (49%), Gaps = 3/174 (1%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ EE R+ D LT L NRR I EI A R L+++ +D+D FK IND Sbjct: 404 ERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRYEQSLALISLDIDHFKTIND 463 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 T GH GD L ++ R D + R GG+EF ++ AERIRS +E Sbjct: 464 THGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAPHTDRAGATELAERIRSELE 523 Query: 403 KTKLKAANGEDIALSLSIGAAMF--NGHPDYERLIQIADEALYIAKRRGRNRVE 454 +T ++ + ++S+G + + L++ AD+ALY AKR GRNR Sbjct: 524 RTPIEL-ESTSLHPTISLGVTALNIQDNDTIDALLKRADDALYEAKRTGRNRTV 576 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 2/166 (1%) Query: 291 SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD 350 + D +TKL NRR+ I + + + R LS+L+ID+D+FK +NDT+GH GD Sbjct: 394 LKLLASTDSMTKLYNRRYFTEISAKVLHLSKREKNNLSILMIDIDRFKVVNDTYGHQFGD 453 Query: 351 EILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAAN 410 E+L +S+ ++ R SD V RYGG+EF+I+L S + A++IR VE ++A Sbjct: 454 EVLIALSRLLVEHQRKSDIVCRYGGEEFVILLPNTSLKDATNIAQKIRILVESLTMEAPT 513 Query: 411 GEDIALSLSIGAAMFN--GHPDYERLIQIADEALYIAKRRGRNRVE 454 ++ ++SIG A + D + ++ AD+ALY AK GRNRV Sbjct: 514 NKEFKFTISIGVAQIDVEHEDDIKFALKRADDALYRAKNSGRNRVC 559 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 70/175 (40%), Positives = 105/175 (60%), Gaps = 2/175 (1%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 EL ++ + +D LT L NR +L REIA A R G P+S+++ D+D FK++NDT Sbjct: 160 EELEKKRLLEKAIIDHLTGLYNRFYLEEAGAREIARAKRYGFPISLIMFDLDNFKQVNDT 219 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH GD +L K + NVRS+D RYGG+EF+++L E ++ AERIR EK Sbjct: 220 YGHQVGDRVLVKFASIVSSNVRSTDMPVRYGGEEFVVLLPHTYPEEAVKVAERIREEFEK 279 Query: 404 TKLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWK 457 + GE + L++S G + N LIQ+AD+A+Y AK +G+NR+E++ Sbjct: 280 FLFR-FEGEVMRLTVSAGISFCNSGECSLGELIQMADKAMYEAKEKGKNRIEVFS 333 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 102/176 (57%), Gaps = 2/176 (1%) Query: 284 RELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDT 343 R+ E+ E D LT + NRR +RE+ A R G PL+VL++D+D+FK +ND Sbjct: 804 RKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDR 863 Query: 344 WGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEK 403 +GH+ GD +L QA +R +D + R GG+EF VL E ++ L AER+R VE+ Sbjct: 864 FGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEE 923 Query: 404 TKLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 + +G+ + ++SIG A+ G + +++ AD ALY AK GRNRV L +A Sbjct: 924 MDVP-FSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEAGRNRVMLARA 978 >UniRef50_Q47HY8 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HY8_DECAR Length = 585 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 12/287 (4%) Query: 173 SLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGI 232 S L+ ++ + AS+ I + + D + + +D+ Sbjct: 308 SRLKEVLFKQAQLKASLSEARDAIKHMLAGFVDHLADFADATSDY--------HDKIESC 359 Query: 233 AEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVK-FLLQIRNTVSQIITLLRELFEEVS 291 AE S+ I + + + + MR TR + + R + L + V + ++EL E+ Sbjct: 360 AEKISSSKDITELEDVLGEVMRETRTIQINAQRSRDELRSTQQKVQESEARIQELERELV 419 Query: 292 RH--EVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 V D LT LNRR L IF +E A A R T L V +ID+D FK++ND+ GH+TG Sbjct: 420 ASSDLVRHDQLTGTLNRRGLEEIFTKEAARATRHDTALCVALIDIDNFKKLNDSMGHDTG 479 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D+ L ++ + +R D V RYGG+EFII+L E S ++ R++ + K Sbjct: 480 DQALIHLATICRETLRPQDTVARYGGEEFIILLPETSLDDAAIALTRLQRELTKKFFLHG 539 Query: 410 NGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELW 456 N + + ++ S G + +I+ ADEA+Y AK+ G+NRV Sbjct: 540 NEKVL-ITFSAGVTQMLPNDTQATVIKRADEAMYQAKKTGKNRVTTA 585 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 110/212 (51%), Gaps = 1/212 (0%) Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 G L ++ + ++ L + + L E RH +D LT + NR Sbjct: 225 GTVEDADAGMVALLSQFVVLEATLSLVLMAFGALMLTNEHITRELRHLAEVDPLTNVFNR 284 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 R T+ ++ I++A RT + L VL+ID+D FK+INDTWGH +GDE+LR +R Sbjct: 285 RAFLTLLEKAISNAQRTQSGLPVLVIDLDHFKKINDTWGHQSGDEVLRHFVALANGCLRK 344 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 D + R GG+EF I L AS + AER+R+ V G IAL++SIG + Sbjct: 345 EDVMGRLGGEEFAIFLPNASSEGSQAVAERLRALVAHHPAMTGRG-PIALTVSIGVTQYG 403 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRVELWKA 458 G + ++Q ADEA+Y AK RGRNRVE Sbjct: 404 GGETSDFVLQRADEAMYRAKERGRNRVETLSP 435 >UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UW14_9AQUI Length = 218 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 66/159 (41%), Positives = 93/159 (58%), Gaps = 4/159 (2%) Query: 295 VGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILR 354 D LT L NRR + E A R GTPLSV +ID+D FK INDT+GH GDE+L+ Sbjct: 61 ASTDPLTGLPNRREIMNFLDFEFNRAKRNGTPLSVAVIDLDDFKFINDTYGHVAGDEVLK 120 Query: 355 KVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI 414 ++ N+RS+D V R+GG+EF++V+ + N ++ ER+R VE+T + Sbjct: 121 SLASLIRRNLRSTDMVGRFGGEEFVVVMPDTPLNTAVKVMERLRRVVEETYFEPIG---- 176 Query: 415 ALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRV 453 ++S+S+G A D L+ AD LY AKR G+NRV Sbjct: 177 SVSISVGVAQLREGDDVSNLLSRADGKLYQAKREGKNRV 215 >UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4USH9_XANC8 Length = 578 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 96/193 (49%), Gaps = 1/193 (0%) Query: 267 KFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTP 326 + + + L E R + D LT L NRR+L E+A R P Sbjct: 371 RLEIAEAAAEQLSLALSNLRLRESLRRQSIRDALTGLYNRRYLEEALSHELARCARRDLP 430 Query: 327 LSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEAS 386 LSVL++DVD FK+ ND GH GD +L V + +R+ D RYGG+EF ++L E Sbjct: 431 LSVLMLDVDHFKQFNDGQGHAGGDLLLAAVGELLLTRLRAEDVACRYGGEEFTVILPETD 490 Query: 387 ENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDY-ERLIQIADEALYIA 445 E +R AE+IR + + ++ SIG A F + LIQ AD ALY+A Sbjct: 491 GEEAMRVAEQIRGHIAALAVSDGQRALPRVTASIGVASFPADGELGSALIQKADAALYVA 550 Query: 446 KRRGRNRVELWKA 458 KR+GRNRVE A Sbjct: 551 KRQGRNRVERHGA 563 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 6/217 (2%) Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 + G+ + N N + + + ++ LR E + D LT Sbjct: 451 HGETLGLLYLNLSNVELFNPSQQHLAEAVSKQIAIAFANLKLR----ETLEEQSLRDPLT 506 Query: 302 KLLNRRFLPTIFKREIA-HANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF 360 L NRR+L RE+ L ++++D+D FK+ ND +GH GD +L+ V+ Sbjct: 507 GLFNRRYLEISINRELNTIIQDQDYSLGLIMLDIDHFKQFNDNFGHEAGDLVLQTVANCL 566 Query: 361 YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI 420 +++R SD R+GG+EF+I+L AS N+TL AE+IR +++ K++ + +++ S Sbjct: 567 QNHIRQSDIACRFGGEEFMIILPRASLNKTLERAEKIRESIKQLKIEYKSQPLDSITASF 626 Query: 421 GAAMFNG-HPDYERLIQIADEALYIAKRRGRNRVELW 456 G A F L AD+ALY AK++GR+RV Sbjct: 627 GVAAFPQNGTTLHELFIDADKALYQAKKQGRDRVVCA 663 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 266 VKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 V+ + I I+ L E R D LT + NRR T+ + I+H++R + Sbjct: 192 VESIAAIVLMAFGIVMLANEQVTLELRAIAERDPLTGVFNRRSFLTLLDKSISHSDRMAS 251 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 PLS+++ID+D FK+INDTWGH +GDE LR +R+ D + R GG+EF I+L + Sbjct: 252 PLSIMLIDLDHFKKINDTWGHKSGDEALRHFVAVAVPCIRNGDIIGRVGGEEFAILLPDT 311 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIA 445 ++ AER+R V +K +G I L++SIG + E + AD A+Y A Sbjct: 312 DISKAATVAERLRCEVAARPVKNEHG-SITLTVSIGVTHYRKDEAPEVTLHRADNAMYTA 370 Query: 446 KRRGRNRVEL 455 K +GRN+VE+ Sbjct: 371 KDKGRNQVEV 380 >UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7C6_9DELT Length = 297 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 5/223 (2%) Query: 235 VGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT--LLRELFEEVSR 292 V I+D D + + R ++ LR L+++ ++ + ++ + + E Sbjct: 74 VDEFGIKIRDNDSTNGTYINDNR-IHEAYLRDGDLVKVGRSIFKFLSGDNIESSYHEEIF 132 Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 +D LT++ NRR+ +RE++ A R PL++LI D+D FK NDT+GH GD + Sbjct: 133 RLSTVDGLTQVFNRRYFMETLERELSRARRYDRPLALLIFDIDHFKRCNDTYGHRAGDFV 192 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE 412 LR++++ R D V RYGG+EF ++L E AE+IR + G Sbjct: 193 LRRIAELVTMRARKVDVVSRYGGEEFTVILPEIDIRGASAFAEKIRKLIADETF-IFEGR 251 Query: 413 DIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVE 454 I +++SIG A + + +IQ AD LY AK GRNRV Sbjct: 252 KIPVTISIGVAEIGPSVANADDMIQTADRRLYAAKTGGRNRVV 294 >UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC3_9PROT Length = 598 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 8/187 (4%) Query: 272 IRNTVSQIITLLRELFE----EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPL 327 ++N +II+ + + D LT+L NR L IF ++A A R T Sbjct: 412 VKNEKDEIISYTAIRHDITDKKRIEELSITDRLTQLYNRLKLDEIFAMKLATAGRYNTNF 471 Query: 328 SVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASE 387 SV+IID+D FK +NDTWGH GD++LR+ ++ +N R +D V R+GG+EF+I+ ++ Sbjct: 472 SVIIIDIDYFKLVNDTWGHQAGDDVLREFAEIIKNNARETDIVGRWGGEEFLILSSDTDL 531 Query: 388 NETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKR 447 + ++ +E++R V A + + S G + ++ D + +++ ADEALY AK Sbjct: 532 DGAIKLSEKLREMVSLFNFSFAGYK----TASFGVSSYHPGDDEKTMVKRADEALYRAKE 587 Query: 448 RGRNRVE 454 GRNRVE Sbjct: 588 NGRNRVE 594 >UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8Q2_9ALTE Length = 379 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 1/213 (0%) Query: 247 GIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNR 306 I + + L + FL + + + L + + D LT LLNR Sbjct: 157 AIVDLEFKQLIPFLFDPLVMIFLGMVVSGSLSQLRRSEFLSRQQLKSLASTDQLTGLLNR 216 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 + ++ +A R G P S+++ D+DKFK +ND++GHN GDE+L + + D+VR+ Sbjct: 217 HAIHKSLEQLVARHARHGHPFSLILGDLDKFKRVNDSYGHNVGDEVLIETANRLQDHVRA 276 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 D + R+GG+E ++VL + + L AE++R + + + A G I ++S G ++ Sbjct: 277 GDILCRWGGEELLVVLPDTERDSALAVAEKLRCAIGEAPM-TAGGHSIEQTISFGVTCYH 335 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + I AD ALY+AK+ GRNRV + Sbjct: 336 NGEHIDTTIMRADSALYLAKQGGRNRVVSVEPG 368 >UniRef50_C6XBN7 Diguanylate cyclase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBN7_METSD Length = 622 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 6/288 (2%) Query: 173 SLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGI 232 S L+ ++ + ++ + + + D + + ++ +K Y I Sbjct: 319 SSLKELLYKQGQIKPRLIEAKDSLKRMAEIFVDRLAEMDTDTGEY----QNKLNGYRDRI 374 Query: 233 AEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSR 292 + L D + N T ++ + Q + ++I L + +S Sbjct: 375 TSTEDLVELNSVIDSLLNDTRSIGLSIQRSKDALVDAQQRADEAEKLIDELTRRLDHISE 434 Query: 293 HEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEI 352 D LT LNRR + +RE A A+R GTPLS+ ++D+D FK++ND GH TGD+ Sbjct: 435 -VAHEDYLTGTLNRRGMDEAMEREFARADRHGTPLSIAMMDIDHFKQLNDNLGHATGDQA 493 Query: 353 LRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGE 412 L + + ++R++D + RYGG+EFII+L ++E + +R++ + K N Sbjct: 494 LIHLVRIVKYSLRNTDVLARYGGEEFIIILPSTKQDEAMDIMKRVQRDLTKNFFMHRNER 553 Query: 413 DIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 + ++ S G A E ++ AD ALY AK GRN+V +A L Sbjct: 554 VL-ITFSAGVAERLPGEGPETIVPRADAALYKAKHSGRNQVIGAEALL 600 >UniRef50_C6MLU9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. M18 RepID=C6MLU9_9DELT Length = 465 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 11/241 (4%) Query: 220 WFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 W H I ++ D + T S + LL Sbjct: 233 WEERMPVHCHPEAERYERILVPLKAVDKVVGLISLYTDPGTEVSESLMSLLSSLG-NQIG 291 Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 I + E ++ D LT L NRRFL ++ A R G SV+++D+D FK Sbjct: 292 IAVNNSRLYEETKSVSLHDPLTGLANRRFLDIQLEKVFELARRHGENQSVIMLDIDHFKI 351 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 NDT+GH GD++L +++ +R SD+VFRYGG+EF+ +L + AER+R+ Sbjct: 352 YNDTYGHQGGDQLLVRLAGILKAQMRKSDFVFRYGGEEFLALLPDTDLPMACDAAERVRA 411 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWKA 458 VE+ +++S+G A + PD E L++ AD ALY AK RGRNRVE + Sbjct: 412 AVEREA---------GVTISLGVAAYRDGMPDKEALVRAADAALYRAKERGRNRVETAEG 462 Query: 459 S 459 Sbjct: 463 D 463 >UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR80_ACIC1 Length = 710 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 2/176 (1%) Query: 277 SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336 + + L + + D LT L N R+L EI A R PL++L+ID+D+ Sbjct: 491 QASVAIENVLLHQEAERLSLTDALTGLWNYRYLTMTLGHEIERATRFRRPLALLMIDLDR 550 Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396 FK+IND GH GD +L ++++ + VR D V RYGG+EF+++L E + TAER Sbjct: 551 FKDINDRHGHQAGDAVLVELARRLHTTVREVDTVARYGGEEFVVILPETDADGAAHTAER 610 Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYER-LIQIADEALYIAKRRGRN 451 +R V T DI ++ SIG A+F H L++ ADEALY+AK GR+ Sbjct: 611 LRQAVRGTPF-HVEQMDIPVTASIGIAVFPRHGSSAAILLRAADEALYVAKHSGRD 665 >UniRef50_Q30WR5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WR5_DESDG Length = 361 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 8/250 (3%) Query: 217 FGLWFNHKGRHYFSGIAEVGH-ISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNT 275 F + H + +E+ H ++ + ++ ++ + I N Sbjct: 92 FHMIALQSSPHITNIFSELIHMLNEQGVLLRATQKKAAEARSTGSDNVQLLEDYMIINNE 151 Query: 276 VSQIITLLRELFEEV------SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSV 329 +S+ L E++ D LT NRR + EI + R GTPLS+ Sbjct: 152 LSRNKRELAIRHEQLKKAFSDIEELSRTDPLTGACNRRKVIEFLSAEIDRSKRYGTPLSI 211 Query: 330 LIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENE 389 L +D+D+FK INDT+GH GD+ L + +R +D R GG+EF+ VL A+ + Sbjct: 212 LSLDIDRFKAINDTYGHAAGDDALIAFCRVCRQQLRKTDLFGRTGGEEFVAVLPHAACRD 271 Query: 390 TLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRG 449 +AERIR VE+ + N + ++SIG A+ + + L++ AD ALY AK G Sbjct: 272 AQISAERIRRHVEQIHI-TYNNACVRFTVSIGIAVHEAGENTDTLLRRADAALYRAKTAG 330 Query: 450 RNRVELWKAS 459 RN V + + S Sbjct: 331 RNTVSVAEKS 340 >UniRef50_B3QT84 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QT84_CHLT3 Length = 611 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 8/242 (3%) Query: 220 WFNHKGRHYFSG-IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQ 278 FN YFS + + + ++ + + + + + L + T+ + Sbjct: 370 AFNEMREAYFSNEMKKKTRVLKVRYESEQNLKEKEIYRLKNEELAAAYERLRSLNRTLRE 429 Query: 279 IITLLRELFEEV------SRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLII 332 +L E++ + D LT L NRR+L + +E A R + L V + Sbjct: 430 ANEQKSQLLEQLRVQTIALEKQTREDPLTGLYNRRYLTFLLLQEFERAKRYNSALGVAMA 489 Query: 333 DVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLR 392 D+D FK +NDT+ H GDE+L+ +++ F N R D V RYGG+EF+ E ++ + Sbjct: 490 DIDHFKNVNDTFSHQVGDEVLKIIAKIFIQNCRIIDTVARYGGEEFVFFFPETPLDKAVS 549 Query: 393 TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNR 452 +E+IR V + + + +++SIG P +E+++ +ADE LY AK GRNR Sbjct: 550 ASEKIRKAVANYDWNSVE-KGLTVTVSIGVTANIDVPSHEKMLSLADEKLYEAKATGRNR 608 Query: 453 VE 454 V Sbjct: 609 VC 610 >UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVY6_CHLT3 Length = 440 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 78/224 (34%), Positives = 108/224 (48%), Gaps = 3/224 (1%) Query: 237 HISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVG 296 I + D N + + + + ++ T+ + + E E V Sbjct: 215 TIKEVRADIPDTLNTMVGELDDFVKKRHHDDEISKLARTLRHLGKEVEEKTNE-LNQMVI 273 Query: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356 D TKL N R F E+A A R PLS+++IDVDKFK NDT GH GD++L KV Sbjct: 274 TDEKTKLFNFRHFKQEFLIEVARAKRFNEPLSLIMIDVDKFKHYNDTNGHMLGDQVLIKV 333 Query: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGED-IA 415 S R +D R+GG+EF +L E + AERIRS +E ++ + + Sbjct: 334 SALLKKECRETDVPARFGGEEFAALLPRTDAKEAFQVAERIRSSIETSEFENQKAQPGGN 393 Query: 416 LSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWKA 458 L+ S+G A F D E LI ADEALY AK GRNRVE++ Sbjct: 394 LTASLGVATFPFDAYDAEALIIAADEALYRAKENGRNRVEVYSK 437 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 6/229 (2%) Query: 232 IAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVS 291 G I L I + I ++++ ++ L E Sbjct: 289 YTLHGMIRSLDHLLAEIGQIGAEEDFGRRLPVAAGHEIGIIARHFNKLLEVVERLLREK- 347 Query: 292 RHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDE 351 G D LT L NRR + +E+ R PLS+LI D+D FK +NDT+GH TGD Sbjct: 348 DQLAGTDQLTGLNNRRRFKELLDQELIRYRRIPKPLSLLIFDIDHFKRVNDTYGHETGDL 407 Query: 352 ILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANG 411 +L++++Q VR +D R+GG+EF+++L + + AE++R +E+ Sbjct: 408 VLKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTAEAAMALAEKLRQAIEEHDFPRVG- 466 Query: 412 EDIALSLSIGAAMFNGHPDYE-RLIQIADEALYIAKRRGRNRVELWKAS 459 ++ S G A F+ E L++ D+ALY AKR+GRNRV W A+ Sbjct: 467 ---RVTASFGVAAFHDGEQEESALLRRVDKALYQAKRQGRNRVVNWAAA 512 >UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y5_9PROT Length = 671 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 142/334 (42%), Gaps = 8/334 (2%) Query: 126 SDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQ 185 ++ V + + +A+ + + + +E+ R ++ + Sbjct: 338 NEVGRDILYGVAYLLLAFGSLAIAFFSLSRKQARVRMEEEEARLREIAVTMSDGLLVADL 397 Query: 186 IASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDF 245 I + + + L L + G+ + ++R + + Sbjct: 398 EGKITFANPEACRLLGY---SENELLGKDMHGTLHVHGDGKQKEKHECSMLRVARTGETY 454 Query: 246 DGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT----LLRELFEEVSRHEVGMDVLT 301 + L S+ V +++ + ++ R+ FE+ +D LT Sbjct: 455 RAVEEIFRCKNGQLLPISVSVSAIIREQQAAGIVVAFHDITERKKFEQELERRAQIDALT 514 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 L NRR + ++EI R G PL+++++DVD FK+INDT+GH+ GD +L+ + Sbjct: 515 SLNNRRHFYELAEQEILRTKRYGKPLALMMLDVDHFKDINDTYGHHVGDTVLQTLGAVCL 574 Query: 362 DNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIG 421 +R D + R GG+EF I+L EA+ + AER+R V + G+ ++ ++SIG Sbjct: 575 QTMREIDIIGRLGGEEFAILLPEATAAQAFDAAERLRLAVAAIAMPLEQGQTLSFTISIG 634 Query: 422 AAMF-NGHPDYERLIQIADEALYIAKRRGRNRVE 454 D +++ ADEA+Y AKR GRNRV Sbjct: 635 VTGLVAKDSDIADMLKRADEAMYQAKRSGRNRVC 668 >UniRef50_Q2BMK3 Serine/threonine kinase with two-component sensor domain n=3 Tax=Bacteria RepID=Q2BMK3_9GAMM Length = 1723 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 4/222 (1%) Query: 242 IQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLT 301 ++ + +Q N ++ + V++ L EL EE + V D LT Sbjct: 1500 LEVVSLLTDQATVAIENAGLYEQVQEYTHSLEEKVAERTAQLEELNEE-LKKLVDSDGLT 1558 Query: 302 KLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFY 361 L NRR T R R PLS+++ DVD FK NDT+GH +GD+ L +++ Sbjct: 1559 GLANRRCFDTYLARTWLRLRREQNPLSIVMFDVDYFKTFNDTYGHQSGDDCLVMLAKTVR 1618 Query: 362 DNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDI-ALSLS 419 + + R +D V RYGG+EFI+VL + E + A +I V K+ N +++S Sbjct: 1619 EQIQRPADLVARYGGEEFIVVLPDTDEEGAMAVAGQICVAVASLKIPHCNSVVADHVTIS 1678 Query: 420 IGAA-MFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL 460 +G A + LI++AD+ALY AK++GRN+V+L + Sbjct: 1679 VGVATTCPDTQGPDSLIELADQALYEAKKQGRNQVKLAAKPV 1720 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 93/433 (21%), Positives = 161/433 (37%), Gaps = 26/433 (6%) Query: 44 RIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGI 103 + L +Q+ + A++ W+++ + DV + R G+ Sbjct: 261 DHLLDVEDERLGL-YQQIFER-HDAIQ-WLVDPREGVLVDVNEAAARFYGFHRTEMR-GM 316 Query: 104 PVEIVEMG---------FRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRA 154 PV + RV + + F ++ E +V S E + Sbjct: 317 PVSKINQLSPEAVREAMARVQRGEQKVLYFPHRLASGEIREVEVHSGAVDVGGREYLHSI 376 Query: 155 FTFSDSSASKEDENYRIFSLLENAE-----EEKERQIASILSWEIDIIYKILLDSDLGSS 209 ++ +LE + E E ++ + + + L S Sbjct: 377 IHDITERRELARNRRQLVEILEASPQFIAMAEAEGRLVYLNRAGRALFREWLPGVSPESK 436 Query: 210 LPLSQADFGLWFNHK--GRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVK 267 L H + F + L + + Sbjct: 437 DLTVNFAEVLRLAHPPWAVRRILEEGLPTAAREGHWMGETAFRRADGGETPLQQLIVAHR 496 Query: 268 FLLQIRNTVSQIIT--LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGT 325 S + R+ E+ R+ D LT L NRR +RE+ A RTG Sbjct: 497 DETGRVERYSTVAEDITERKRREQALRYRASHDGLTGLYNRRHTQRALERELRLAARTGH 556 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 P+SV++ D+D FK +NDT GHN GD++LR+++ + VR +D V R+GG+EF++VL Sbjct: 557 PVSVVLFDLDHFKRVNDTHGHNAGDQVLRQLAGLVTERVRDTDIVGRWGGEEFLLVLPGT 616 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIA 445 E + AE +R+ V + + + +++S+G A + L + D+ALY A Sbjct: 617 DETGAGQLAEVLRAYVAEARFPIPD----PVTISLGYAQAGADEGADALFKRVDQALYAA 672 Query: 446 KRRGRNRVELWKA 458 K GRNR + KA Sbjct: 673 KANGRNRAQAAKA 685 >UniRef50_Q04S93 GGDEF domain receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04S93_LEPBJ Length = 330 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 11/242 (4%) Query: 224 KGRHYFSGIAEVGHISRLIQDFDG--IFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIIT 281 K + + G I +I+ FD + + R + R + ++ Q+ Sbjct: 93 KESNVLQKAFDSGAIDYVIKPFDATELLARVRSALRLFEEMTRRKEREKELEKLTDQLQE 152 Query: 282 LLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIN 341 + L D LT L NRR+ I E RTG ++++++D+D FK N Sbjct: 153 VNSYLV-----AISRTDSLTGLYNRRYFYEILTTEWKRCWRTGAGIALIMLDIDHFKLYN 207 Query: 342 DTWGHNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR 400 DT+GH GD+ L++V++A D R+ D RYGG+EF ++L E +E+ + + I Sbjct: 208 DTYGHQGGDQCLKQVARAIRDCARRAGDVAARYGGEEFAVILPETNESNAVVVSRNILEN 267 Query: 401 VEKTKLKAANGEDIA-LSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELWK 457 VEK + + + + +++SIG A + P LI+ AD+ALY+AK GRN + + Sbjct: 268 VEKMAIPHSASKTNSIVTVSIGMATLSPSPENSITELIERADKALYLAKEEGRNCLRFYP 327 Query: 458 AS 459 Sbjct: 328 QG 329 >UniRef50_B7GIF3 Response regulator with a diguanylate cyclase output domain n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GIF3_ANOFW Length = 421 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 86/360 (23%), Positives = 146/360 (40%), Gaps = 17/360 (4%) Query: 108 VEMGFRVLKKILYPVIFSSDYSAAEKLQVY-----HFSINSIDIAMEVMTRAFTFSDSSA 162 R + K + +I ++ ++ F + ID E ++ S Sbjct: 69 FIRRIREIDKHVQIIITTAYDDNDFFIRAIEYGVNRFILKPIDH--EKFLQSLQHSIYQR 126 Query: 163 SKEDENYRIFSLLENAEEEKERQIASILSWEI---DIIYKILLDSDLGSSLPLSQADFGL 219 E E + + +E I + + ++ ++ + L + Sbjct: 127 QLERELEKQKQYTRTIIDFQENLICILNDERLLDCNLSFQHFFGQEQLKQLRAGRTHVCD 186 Query: 220 WFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQI 279 +F H+ YF E + LI M + ++ N+ + Sbjct: 187 YFVHE-PGYFYIKGERRWLRPLIDRTIPFLKVKMCKQAEEHVFLVKATSFPDEPNSYLVV 245 Query: 280 ITLLRELFEEVSRH--EVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKF 337 T + L EE R+ D LTK NR F REI A R S+++ D+D F Sbjct: 246 FTDITALEEESKRNEFLATKDPLTKTFNRLKFDEFFTREIHRAKRYKHTFSIILFDIDHF 305 Query: 338 KEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERI 397 K++NDT+GH+ GD +L ++ +A + +R D + R+GG+EFII+ S+ R AE + Sbjct: 306 KKVNDTYGHDVGDLVLVRMCEAISNRLRDCDILARWGGEEFIILAPATSQTGAYRLAEAL 365 Query: 398 RSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWK 457 R VE ++ S G + E++++ ADEALY AKR GRNRV + + Sbjct: 366 RHLVETVHFPTVG----HMTCSFGVCEYEQGMTKEQMVKRADEALYEAKRTGRNRVVVSE 421 >UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXI5_MARAV Length = 523 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 95/179 (53%), Gaps = 1/179 (0%) Query: 280 ITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKE 339 ITL + D LT L NRR+ +F+ E + R+ PL +LI D+D FK Sbjct: 344 ITLSGLALRAELQRFSYEDSLTGLKNRRYFDELFRHEREVSARSDRPLCLLIFDIDHFKL 403 Query: 340 INDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRS 399 ND GH GD+ LR V R SD V RYGG+EF +++ AS +E + AE++R+ Sbjct: 404 FNDCHGHEAGDQALRMVGDVLATCFRGSDTVCRYGGEEFSVLMPGASLDEARQRAEQLRA 463 Query: 400 RVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNRVELWK 457 + ++ +L++S G A + + P+++ L + AD+ALY AK GRNRV Sbjct: 464 AISAEPVEHRGENLGSLTISAGIACWRENCPEFDELFRAADQALYQAKETGRNRVVAAS 522 >UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8G7_ALHEH Length = 237 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 4/177 (2%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ +E R+ D LT ++NR +EI A R P++V++ D+D FK +ND Sbjct: 60 ERKRDQERIRYLATTDALTGIMNRGEFTRHLTKEIERAARFNRPVAVVMYDLDHFKRVND 119 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 T+GH+ GDE+L+ + +R D R+GG+EFI++L E +++AER+R+ + Sbjct: 120 TYGHDAGDEVLKTAVAQVNNAIRRVDVHARWGGEEFILLLPETDLAAAVKSAERLRAAIA 179 Query: 403 KTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 + K ++ S G ++ LI+ AD+ALY+AK GRNRVE Sbjct: 180 EHPFKQPE----RVTASFGVTTLGPRDRFDVLIKRADDALYLAKHAGRNRVEALSPE 232 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 13/330 (3%) Query: 133 KLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYR-IFSLLENAEEEKERQIASILS 191 I +A E+ + + + +E YR +F + E +++ Sbjct: 495 LYSGTLDGDTIIGVANEI--SEMRATQEALRRSEERYRALFDNAADGLLLYE-ADGTLID 551 Query: 192 WEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQ 251 + I + L +S + + R + I E GH F+ + Sbjct: 552 -VNETIARRLGESREAIVGRNVASIVEPEVLERVRPRLTEILETGH-----ASFESVHRT 605 Query: 252 TMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPT 311 M N+ + R++F + S R+ E E D LT + NRR Sbjct: 606 AMG-PVNVEVHARRIEFEGRFVVLSSARDITERKNLEAALLREATTDPLTGVRNRRQFFV 664 Query: 312 IFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVF 371 RE A A R + L+VL++D+D FK +ND +GH GDE+LR + + +R+ D Sbjct: 665 DANREFARALRHDSGLAVLMLDIDHFKNVNDLYGHQAGDEVLRAFAACCVEALRAYDVFG 724 Query: 372 RYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHP-D 430 R GG+EF +L AS E + TAER+R RVE+ + G + ++S+G Sbjct: 725 RLGGEEFAALLPAASPEEAMETAERLRKRVERRSV-VYEGTALQCTVSVGVTSLAAADLG 783 Query: 431 YERLIQIADEALYIAKRRGRNRVELWKASL 460 ++ +++ AD ALY AK GRNR E+ + Sbjct: 784 FDDMLRRADRALYAAKDHGRNRSEMAPMPM 813 >UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales RepID=A3WKT4_9GAMM Length = 364 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 65/170 (38%), Positives = 92/170 (54%) Query: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 L + R D LTKL NRR + + KR + + + +SVL++D+D FK +NDT G Sbjct: 177 LTHDQLRFYATTDPLTKLRNRRHMSELLKRALQNKHAEQRNVSVLLLDLDHFKSVNDTHG 236 Query: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 H GD++LR + D VR D V R+GG+EF++ L + N + AERIR + K Sbjct: 237 HEVGDKVLRITADILRDTVRDHDKVSRWGGEEFLVFLPRTNLNHAAQVAERIRKAIAKYP 296 Query: 406 LKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 E+I L+ SIG + L++ AD+ALY K GRN VEL Sbjct: 297 WHTVINENIQLTTSIGVSELKPDDSVNTLVKRADDALYRGKEAGRNWVEL 346 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 1/178 (0%) Query: 283 LRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEIND 342 R+ E R D LT +LNRR + +EI A+R PL+++++D+D FK IND Sbjct: 136 ERKRLEAELRQLATTDPLTGILNRRRFTELTTQEIHRAHRLRHPLTLIMLDIDWFKRIND 195 Query: 343 TWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVE 402 +GH GD +++ ++ A +R D + R GG+EF +VL E + +L AER+R +VE Sbjct: 196 AFGHTVGDRVIQSLASACASELREIDILGRLGGEEFAVVLPELGASGSLEVAERLRQKVE 255 Query: 403 KTKLKAANGEDIALSLSIGAAMF-NGHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 ++ +G + + S+G A+ + + L+ AD ALY AKR GRN V S Sbjct: 256 GLQITLNDGRIVRFTCSLGVAVLKDTDQSPDTLLVRADNALYRAKRDGRNCVRAASDS 313 >UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWB7_DESAC Length = 513 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 8/220 (3%) Query: 238 ISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGM 297 IS I F+ I ++ + + S R L Q+ T + ++ + L +E + Sbjct: 296 ISAQINHFNRI-GESGDLSERFEDHSSR--ELHQLSQTANHMLDRIESLNKE-LQLASMT 351 Query: 298 DVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVS 357 D LT++ NRR + E A R GT +S+L+ID+D FK NDT+GH GD+ L+ V+ Sbjct: 352 DSLTRVGNRRQFDEHLQHEWLIARRNGTVVSLLMIDIDHFKLYNDTYGHQDGDQCLQSVA 411 Query: 358 QAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIA- 415 + + V R +D V RYGG+EF ++L + + AERIR + + + Sbjct: 412 EVISNQVKREADLVARYGGEEFAVILPDVPLIGAQKVAERIRQAINDLGIPNVDALKTPW 471 Query: 416 LSLSIGAAMFNG--HPDYERLIQIADEALYIAKRRGRNRV 453 +++SIG + D E LI+ AD+ALY AK+ GRN + Sbjct: 472 ITVSIGYESMSPQSGQDCEELIRFADQALYRAKKAGRNCI 511 >UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geobacter RepID=Q39S35_GEOMG Length = 686 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 124/260 (47%), Gaps = 8/260 (3%) Query: 204 SDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNL---N 260 + G+ L ++ + R F + V +L + G+ N + + + + N Sbjct: 412 AASGNPLLVNDIEKDKRIGIPNRPRFKTKSFVSIPIKLRESVAGVLNLSDKKNQGIFTEN 471 Query: 261 NRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHA 320 + +L + F + + +++ R F D LT L NRRFL + E+A + Sbjct: 472 DLNLLITFADHASIMIERALSIERADF---LEQLSITDPLTGLYNRRFLKRRMEEELARS 528 Query: 321 NRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFII 380 R L+V++ID+D FK ND GH GD L+K+++ D R D V RYGG+EF I Sbjct: 529 IRQNLSLTVMLIDLDNFKIYNDLCGHLAGDRALKKMARILSDTARQMDVVTRYGGEEFCI 588 Query: 381 VLTEASENETLRTAERIRSRVEKTKLKAANGED-IALSLSIGAAMFNGHPDYER-LIQIA 438 +L S+ E+L AERIR +E + L+ SIG + F + E L++ A Sbjct: 589 ILPGTSKKESLFVAERIRREIEGEEFSHEENLPQGRLTASIGVSSFPEDGNVEAVLVKAA 648 Query: 439 DEALYIAKRRGRNRVELWKA 458 D ALY AK GRNRV + Sbjct: 649 DVALYRAKSEGRNRVVISGP 668 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 7/181 (3%) Query: 280 ITLLRELFEE-VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFK 338 + R++ + + E D L + NRR+L K E A PLS+ +ID+D FK Sbjct: 95 LRTTRDIMQNYALKQENITDSLMGIFNRRYLDRRLKDETERALNYSQPLSIFLIDIDHFK 154 Query: 339 EINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIR 398 ++ND +GH GD +L+ ++Q ++R SD + R+GG+EF+++L ++ + AER+R Sbjct: 155 QVNDNYGHQVGDLVLKNIAQLIKHSLRESDVLARFGGEEFVVILPRTKDSTSYTLAERLR 214 Query: 399 SRVEKTKLKAA-----NGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYIAKRRGRNR 452 VE +L + I++++SIG A N D + LI+ AD ALY AKR GRN+ Sbjct: 215 HVVEDFQLTLPEESDKDSLSISVTVSIGVAGLNAQCKDCQCLIENADRALYQAKRNGRNQ 274 Query: 453 V 453 V Sbjct: 275 V 275 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 95/193 (49%), Gaps = 5/193 (2%) Query: 269 LLQIRNTVSQIITLLRELFEEVSRHEVG---MDVLTKLLNRRFLPTIFKREIAHANRTGT 325 L+ + +S ++ + SR D+LT LNRR RE A R G Sbjct: 299 LVLVVAGLSTLLVRGQIRLNRQSRELALAASTDMLTGALNRRAFMESASREFARVCRYGG 358 Query: 326 PLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEA 385 LS ++ID+D FK +NDT+GH GD +L + +R D RYGG+EF+I+L Sbjct: 359 HLSCIMIDLDHFKNVNDTYGHAAGDLVLSSSAHYIASRLREPDMFCRYGGEEFVILLPGT 418 Query: 386 SENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGH-PDYERLIQIADEALYI 444 N AE +R+ + L+ + E + L+ S G A + + L+ +AD+ALY Sbjct: 419 DRNGAATVAEELRAGLAGLDLQRGD-EKLPLTASFGVAEIHAQCATLDTLLSLADQALYE 477 Query: 445 AKRRGRNRVELWK 457 AK GRNRV L Sbjct: 478 AKENGRNRVCLAP 490 >UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1G5_PELTS Length = 343 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 20/248 (8%) Query: 212 LSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQ 271 +++ D+G+ FN + +AE FN+ + R LL+ Sbjct: 102 IARGDYGITFNLRSNLEIEALAEN-------------FNKMSLKLKEERENLFRQVALLE 148 Query: 272 IRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLI 331 + + D LT NRR++ + ++E+A A R G PLS+++ Sbjct: 149 EQKREISVQKEELARVNSRLELLSITDPLTGAYNRRYIISQLEQELAVAARHGLPLSLIM 208 Query: 332 IDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETL 391 ID+D FK++NDT GH GDE+L+ V + +R++D + RYGG+EF+++ E L Sbjct: 209 IDIDHFKKVNDTHGHQVGDEVLKDVVKVLSGCIRTADVLGRYGGEEFVVIAPFTGFQEAL 268 Query: 392 RTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPD------YERLIQIADEALYIA 445 AER+R V + + G + L++S+G FNG + +RL+ ADE +Y A Sbjct: 269 VLAERLRDTVSRWPFETTYG-FLKLTISLGVTTFNGKEEHYHNSLIDRLLARADEEMYKA 327 Query: 446 KRRGRNRV 453 K +GRN V Sbjct: 328 KAQGRNLV 335 >UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2K3_9DELT Length = 499 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 3/169 (1%) Query: 290 VSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTG 349 + D LT++ NRR E+ R P+S+L++D+D FK INDT+GH G Sbjct: 314 QVKVRADHDGLTRIHNRRAFDERLVEELRRHQRYHHPMSLLMLDIDHFKGINDTYGHLVG 373 Query: 350 DEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAA 409 D +LR+V + + +RS+D+ RYGG+EF+I+L + +E ++ AER+R + + Sbjct: 374 DHVLREVGRLMTETLRSTDFTARYGGEEFVIILPQTAEEQSRVLAERLRGLIADARFVH- 432 Query: 410 NGEDIALSLSIGAAMFNGHP--DYERLIQIADEALYIAKRRGRNRVELW 456 +G ++++SIGAA + L+ AD+ALY AK GRN+V Sbjct: 433 DGHPFSITVSIGAATLLPGALSKRKDLLDKADKALYQAKTLGRNQVCTA 481 >UniRef50_D2L2B6 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2B6_9DELT Length = 427 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 79/333 (23%), Positives = 125/333 (37%), Gaps = 11/333 (3%) Query: 129 SAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIAS 188 + + ++D S + + +L E +R++ Sbjct: 81 DEEARRDIRAHLARAVDTLEANHAHLLADLGDPGSLAAHSPELAALYFKPPYELDRRMRF 140 Query: 189 ILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGI 248 L L L FG + + + RL I Sbjct: 141 FLDATRTFYRSDAGRPALSDPKFLDVLAFGQDELLRDLGKVVQEYQRQAVGRL-----TI 195 Query: 249 FNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL--FEEVSRHEVGMDVLTKLLNR 306 + T L L +R V +I L E D LT NR Sbjct: 196 LRRVELATTVGMLALLAAVGLCILRPMVRRICADRERLEGANEALTELAVTDQLTGAYNR 255 Query: 307 RFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRS 366 + + EI R PLSV++ D+D+FK +NDT+GH GD++LR++++ +R+ Sbjct: 256 LKFNQVMEHEIKRTGRYAEPLSVIMFDIDRFKVVNDTYGHAAGDDMLRELTRRVQAAIRA 315 Query: 367 SDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFN 426 D++FRYGG+EF++ + AE++R+ V IA S+S+G Sbjct: 316 VDWLFRYGGEEFVVAAPHTGRAQAAVLAEKLRALVAGAPFPHG----IAGSISLGVTELA 371 Query: 427 GHPDYERLIQIADEALYIAKRRGRNRVELWKAS 459 E L+Q D ALY AK GRNRV + +A Sbjct: 372 PGETVEELMQRVDAALYEAKNSGRNRVVVAEAG 404 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 64/171 (37%), Positives = 93/171 (54%), Gaps = 4/171 (2%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + V D LT L NR L +F+RE+ A R P S++I+D+D FK +ND Sbjct: 307 KRMNAVLERLARTDPLTDLPNRSRLNELFRREVERAQRYRRPFSIVILDIDHFKRVNDEL 366 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH GD L+ + D+VR +D V R+GG+EF+++ E + E ++ AER+R + T Sbjct: 367 GHLAGDRTLQVFAGVVRDSVRGTDTVGRWGGEEFLVLCPETTAEEAVQLAERLRGSLRAT 426 Query: 405 KLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVEL 455 + G I +LS G A F + L+ AD ALY AK GR+RVE+ Sbjct: 427 QF---EGGRIH-TLSAGVAAFREGDSVDTLLHRADTALYRAKNGGRDRVEV 473 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 1/174 (0%) Query: 285 ELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTW 344 + +++ D LT L NRR ++ K E+ ++R + LSV+++D+D FK IND Sbjct: 370 KHYQKELERLSQFDELTNLFNRRHFFSLAKHELNRSSRYRSKLSVMMLDIDHFKRINDGH 429 Query: 345 GHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 GH TGD +L + + D++R SD R GG+EF I+L E + AER+R +V +T Sbjct: 430 GHKTGDLVLANIGKQIGDSLRDSDIAGRMGGEEFAILLPETDLEQASIMAERLRKQVAET 489 Query: 405 KLKAANGEDIALSLSIGAAMFNGHP-DYERLIQIADEALYIAKRRGRNRVELWK 457 L +G + +LSIG A + D E L+ AD ALY AK GRN+V Sbjct: 490 WLDIGDGRTLNCTLSIGLATKSDQQIDLENLLHQADTALYAAKNSGRNKVSCAD 543 >UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B2SWP1_BURPP Length = 516 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 3/235 (1%) Query: 227 HYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLREL 286 + F I I + I+ + + + + + + R Sbjct: 260 YAFRHIDMYPLILDVALSTRDIYVEWRHRAWIIGSLIAALDVTIIALAVLFSYQLRYRRA 319 Query: 287 FEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGH 346 EE R D LT L NRR + E A R PLS+L+IDVD FK ND +GH Sbjct: 320 AEEELRVLARTDGLTGLNNRRTFEEHAEDEWRRAQRNAWPLSMLLIDVDSFKGFNDLYGH 379 Query: 347 NTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 + GD+ L V++ +V R D RYGG+EF ++L + E AE+IR+ V+ + Sbjct: 380 SAGDDALTAVARCISQSVRRPGDTAARYGGEEFAVLLPDTDETGAAFIAEKIRAAVQALQ 439 Query: 406 LKAANGEDIALSLSIGAAMFNGH--PDYERLIQIADEALYIAKRRGRNRVELWKA 458 L+ L++SIG A G L+ AD+ALY AK GRNRV ++ Sbjct: 440 LRHVASSQHVLTVSIGIATTRGEAFATSRALLNAADDALYEAKDAGRNRVLSYRT 494 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 12/232 (5%) Query: 235 VGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFE------ 288 + +I L + F + R++ L ++ + + EL Sbjct: 84 LTNIEDLDRAFAAGAMDYIMKPVKKRELLARIRSALALKTEMDRRKEREEELLRVTAELE 143 Query: 289 ---EVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 ++ +D LT L NRR E A R GTP+S+++ D+D FK NDT+G Sbjct: 144 EAVRKLQNLSSLDGLTGLANRRRFDEYLASEWKRAIRNGTPISLILFDIDWFKPYNDTYG 203 Query: 346 HNTGDEILRKVSQAFYDNV-RSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKT 404 H GD+ L+ ++ V RSSD V RYGG+EF ++L + S+ L AE IR + + Sbjct: 204 HIQGDDCLKAIASLMPKVVRRSSDLVCRYGGEEFAVILPDTSQEGALAVAESIREALSEA 263 Query: 405 KLKAANGEDIALSLSIGAAMFNGHPDYE--RLIQIADEALYIAKRRGRNRVE 454 ++ +++S+G A P E LI ADEALY AKR+GRNR Sbjct: 264 GIEHRQSPLDRVTVSVGVATAYPSPSSEPVTLIGYADEALYEAKRQGRNRTV 315 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.154 0.497 Lambda K H 0.267 0.0472 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,056,186,549 Number of Sequences: 3077464 Number of extensions: 172322733 Number of successful extensions: 548950 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 23595 Number of HSP's successfully gapped in prelim test: 2332 Number of HSP's that attempted gapping in prelim test: 478815 Number of HSP's gapped (non-prelim): 29469 length of query: 460 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 328 effective length of database: 634,171,108 effective search space: 208008123424 effective search space used: 208008123424 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 95 (41.0 bits)