BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (132 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q47157 Uncharacterized protein yafO n=33 Tax=Enterobact... 276 2e-73 UniRef50_C5W1J6 YafO protein (Fragment) n=1 Tax=Escherichia coli... 206 2e-52 UniRef50_Q5QV98 Uncharacterized conserved protein, YafO-like n=1... 110 1e-23 UniRef50_Q7N2D4 Similar to unknown protein YafO of Escherichia c... 67 2e-10 UniRef50_A1ADK0 Putative uncharacterized protein n=2 Tax=Escheri... 67 2e-10 UniRef50_A1JQH6 Putative uncharacterized protein n=1 Tax=Yersini... 50 2e-05 UniRef50_Q7N2M1 Similarities with unknown protein YafO of Escher... 44 0.002 UniRef50_Q2SMU2 Putative uncharacterized protein n=1 Tax=Hahella... 41 0.014 UniRef50_Q1V891 Putative uncharacterized protein n=1 Tax=Vibrio ... 40 0.017 UniRef50_Q2SIU7 Putative uncharacterized protein n=1 Tax=Hahella... 38 0.088 >UniRef50_Q47157 Uncharacterized protein yafO n=33 Tax=Enterobacteriaceae RepID=YAFO_ECOLI Length = 132 Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH Sbjct: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK Sbjct: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 Query: 121 IGKMAEAFRMRF 132 IGKMAEAFRMRF Sbjct: 121 IGKMAEAFRMRF 132 >UniRef50_C5W1J6 YafO protein (Fragment) n=1 Tax=Escherichia coli BL21 RepID=C5W1J6_ECOBB Length = 133 Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 108/132 (81%), Positives = 111/132 (84%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH Sbjct: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 IHLAN NNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAIL + K Sbjct: 61 IHLANVNNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILNLNLINRLEITTKCIK 120 Query: 121 IGKMAEAFRMRF 132 +GK + F F Sbjct: 121 LGKWQKRFACVF 132 >UniRef50_Q5QV98 Uncharacterized conserved protein, YafO-like n=1 Tax=Idiomarina loihiensis RepID=Q5QV98_IDILO Length = 132 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 1/132 (0%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +RVFK+K IR QLT ELDAL DF YK +PD+FGRD YD T+P+++ V H Sbjct: 2 IRVFKSKQIRQQLTDIELDALVKDFKRYKSGEGVPDLFGRDERYDHPDTFPVLRDNEVMH 61 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 +HL + + P+P QF++ +D HLVYC A +LL+ IL P H A + M Sbjct: 62 LHLQDPDEPWPLHCIQFAKKSD-THLVYCPAAMTPNCYLLMIILDPPAHNKAWSSAVMLP 120 Query: 121 IGKMAEAFRMRF 132 +G MAE FR R+ Sbjct: 121 LGIMAEKFRNRY 132 >UniRef50_Q7N2D4 Similar to unknown protein YafO of Escherichia coli n=3 Tax=Gammaproteobacteria RepID=Q7N2D4_PHOLL Length = 134 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 13/139 (9%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +R+F ++ L ++ AL DF +YK LP FGRD Y + ++ + Sbjct: 2 VRIFTYSNLKDALGEQKTKALVDDFKAYKEGKGLPITFGRDVPYKFTNNRSYLELQ---- 57 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLA-------R 113 HL + F +L QF RT+ LVYC G FD +LLIAI+K H + R Sbjct: 58 -HLHYRESGFSLKLVQFRRTSGYV-LVYCSGFFDRSTYLLIAIIKHWNHNESNDIVGTDR 115 Query: 114 DNNQMHKIGKMAEAFRMRF 132 D M ++ K+AE FR +F Sbjct: 116 DIGLMDELEKIAERFREKF 134 >UniRef50_A1ADK0 Putative uncharacterized protein n=2 Tax=Escherichia coli RepID=A1ADK0_ECOK1 Length = 149 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/120 (37%), Positives = 58/120 (48%), Gaps = 14/120 (11%) Query: 20 ALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPF--------- 70 L DFI YK G LP FGRD Y P I+ + H+HLA N F Sbjct: 29 TLVDDFIIYKSTGTLPSYFGRDTSYHRP---PDIEDAGLMHLHLAIGENKFEPIKNGTDI 85 Query: 71 -PPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFR 129 PQ Q+ +T++ A LVY Q FDE + LIA+ P H A ++N+M + A FR Sbjct: 86 STPQKLQWHKTSNTA-LVYAQNLFDENRYSLIALFHPVAHMSANNHNRMRVLAGYARDFR 144 >UniRef50_A1JQH6 Putative uncharacterized protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JQH6_YERE8 Length = 103 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 4/102 (3%) Query: 28 YKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLV 87 +K G LP FG + ++D+ F HIHL + + P+PP+L SR +D +LV Sbjct: 4 WKNGGPLPPEFGSEGQWEDNRKL-CDSFVYKIHIHLPD-DPPWPPRLAVASRKSDN-YLV 60 Query: 88 YCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFR 129 Y + D + LI+I+ PE H LAR + + ++ + AE F+ Sbjct: 61 YARHWLDPNKYQLISIMSPEAHALAR-TSYLAELERRAEEFQ 101 >UniRef50_Q7N2M1 Similarities with unknown protein YafO of Escherichia coli n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N2M1_PHOLL Length = 126 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 15/94 (15%) Query: 28 YKRDGVLPDIFGRDALYD------DSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTN 81 +KR +LP +FGRD ++ DS + L HI + +E P+ Q R + Sbjct: 27 WKRTALLPSVFGRDGQWEHNSRTLDSNIYKL-------HIRMPDEI-PWEKYKPQIDRCS 78 Query: 82 DEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDN 115 D +LVY Q D +++ +I+I+ P+ H+LA+ + Sbjct: 79 DN-YLVYVQHWMDSKSFQVISIMSPKAHELAKTS 111 >UniRef50_Q2SMU2 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMU2_HAHCH Length = 134 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 8/136 (5%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +++F K I Q + + F Y G +FG+D L + + L E+V H Sbjct: 3 VKLFYGKDIEYQKNIPAVKKVIDAFEYYVETGDPGKMFGKDVL---TMSPKLAWEEKVKH 59 Query: 61 IHLANENNPFPPQLR---QFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLAR-DNN 116 +HL +E +L Q RT+D A L+YC G + ++L+ I+ H+ R + Sbjct: 60 VHLLDEKRFRVEKLHLRIQDKRTSD-AFLLYCPGYLNPDYYMLLTIIWNNGHEFLRTEEK 118 Query: 117 QMHKIGKMAEAFRMRF 132 + + A FRM++ Sbjct: 119 TLKSYAEEALEFRMKW 134 >UniRef50_Q1V891 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V891_VIBAL Length = 146 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 56/141 (39%), Gaps = 28/141 (19%) Query: 8 LIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYD--DSFTWPLIKFERVAHIHLAN 65 L LQ D L AD + Y P GRDA D DS IK E + H+HL Sbjct: 12 LQELQQMGFSKDELEADLLKYFDRIATPWYLGRDARMDRPDS----AIKAE-LWHMHLFT 66 Query: 66 ENNPFPPQ-----------------LRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEP 108 PF LRQ+ RT+D L+Y +G D + + ++ I P Sbjct: 67 ---PFKKDGSARTEREWKFERGGRPLRQYYRTSDRW-LIYTRGLMDSEHYCVVGIADPTA 122 Query: 109 HKLARDNNQMHKIGKMAEAFR 129 HK M K + AE F+ Sbjct: 123 HKSCNSPAYMDKFVQAAEDFK 143 >UniRef50_Q2SIU7 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIU7_HAHCH Length = 157 Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 28/140 (20%) Query: 18 LDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQF 77 L L DF +YK G + FGRD LY + + L+ +V HIHL +EN+ + ++ Sbjct: 21 LSQLIKDFSAYKNGGFI-SYFGRDTLYLEPRS--LMNDAKVLHIHLLHENHKWYKAQQEA 77 Query: 78 SRTNDEA-----------------HLVYCQGAFDEQAWLLIAILKPEPHKLA------RD 114 ++ E L+Y QG ++ +L++ L H R Sbjct: 78 IKSGREPIDNYMLRCDVNPPEFDRALIYTQGRKNKNYYLILDFLNGYAHARTTISGKNRL 137 Query: 115 NNQ--MHKIGKMAEAFRMRF 132 NN M ++ K AE FR F Sbjct: 138 NNTIYMEELVKKAEDFRNAF 157 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q47157 Uncharacterized protein yafO n=33 Tax=Enterobact... 192 3e-48 UniRef50_Q5QV98 Uncharacterized conserved protein, YafO-like n=1... 180 1e-44 UniRef50_C5W1J6 YafO protein (Fragment) n=1 Tax=Escherichia coli... 168 5e-41 UniRef50_Q7N2D4 Similar to unknown protein YafO of Escherichia c... 148 4e-35 UniRef50_A1ADK0 Putative uncharacterized protein n=2 Tax=Escheri... 123 1e-27 UniRef50_A1JQH6 Putative uncharacterized protein n=1 Tax=Yersini... 117 1e-25 UniRef50_Q7N2M1 Similarities with unknown protein YafO of Escher... 104 1e-21 Sequences not found previously or not previously below threshold: UniRef50_C2LNB2 Putative uncharacterized protein n=2 Tax=Enterob... 84 1e-15 UniRef50_Q2SIU7 Putative uncharacterized protein n=1 Tax=Hahella... 63 3e-09 UniRef50_Q1V891 Putative uncharacterized protein n=1 Tax=Vibrio ... 54 1e-06 UniRef50_B4F1B8 Putative uncharacterized protein n=3 Tax=Enterob... 50 2e-05 UniRef50_Q7N415 Hypothetical gene n=1 Tax=Photorhabdus luminesce... 50 2e-05 UniRef50_Q2SMU2 Putative uncharacterized protein n=1 Tax=Hahella... 50 3e-05 UniRef50_A6VYA2 Putative uncharacterized protein n=1 Tax=Marinom... 49 6e-05 UniRef50_B8F4F2 Hypothetical phage protein n=1 Tax=Haemophilus p... 47 2e-04 UniRef50_B0QWB2 Putative uncharacterized protein n=1 Tax=Haemoph... 44 0.002 UniRef50_B0BT11 Putative uncharacterized protein n=1 Tax=Actinob... 42 0.007 UniRef50_B3WIS1 Putative uncharacterized protein n=2 Tax=Escheri... 42 0.008 >UniRef50_Q47157 Uncharacterized protein yafO n=33 Tax=Enterobacteriaceae RepID=YAFO_ECOLI Length = 132 Score = 192 bits (487), Expect = 3e-48, Method: Composition-based stats. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH Sbjct: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK Sbjct: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 Query: 121 IGKMAEAFRMRF 132 IGKMAEAFRMRF Sbjct: 121 IGKMAEAFRMRF 132 >UniRef50_Q5QV98 Uncharacterized conserved protein, YafO-like n=1 Tax=Idiomarina loihiensis RepID=Q5QV98_IDILO Length = 132 Score = 180 bits (456), Expect = 1e-44, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 1/132 (0%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +RVFK+K IR QLT ELDAL DF YK +PD+FGRD YD T+P+++ V H Sbjct: 2 IRVFKSKQIRQQLTDIELDALVKDFKRYKSGEGVPDLFGRDERYDHPDTFPVLRDNEVMH 61 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 +HL + + P+P QF++ +D HLVYC A +LL+ IL P H A + M Sbjct: 62 LHLQDPDEPWPLHCIQFAKKSD-THLVYCPAAMTPNCYLLMIILDPPAHNKAWSSAVMLP 120 Query: 121 IGKMAEAFRMRF 132 +G MAE FR R+ Sbjct: 121 LGIMAEKFRNRY 132 >UniRef50_C5W1J6 YafO protein (Fragment) n=1 Tax=Escherichia coli BL21 RepID=C5W1J6_ECOBB Length = 133 Score = 168 bits (426), Expect = 5e-41, Method: Composition-based stats. Identities = 108/132 (81%), Positives = 111/132 (84%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH Sbjct: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 IHLAN NNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAIL + K Sbjct: 61 IHLANVNNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILNLNLINRLEITTKCIK 120 Query: 121 IGKMAEAFRMRF 132 +GK + F F Sbjct: 121 LGKWQKRFACVF 132 >UniRef50_Q7N2D4 Similar to unknown protein YafO of Escherichia coli n=3 Tax=Gammaproteobacteria RepID=Q7N2D4_PHOLL Length = 134 Score = 148 bits (374), Expect = 4e-35, Method: Composition-based stats. Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 13/139 (9%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +R+F ++ L ++ AL DF +YK LP FGRD Y + ++ + Sbjct: 2 VRIFTYSNLKDALGEQKTKALVDDFKAYKEGKGLPITFGRDVPYKFTNNRSYLELQ---- 57 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLA-------R 113 HL + F +L QF RT+ LVYC G FD +LLIAI+K H + R Sbjct: 58 -HLHYRESGFSLKLVQFRRTSGYV-LVYCSGFFDRSTYLLIAIIKHWNHNESNDIVGTDR 115 Query: 114 DNNQMHKIGKMAEAFRMRF 132 D M ++ K+AE FR +F Sbjct: 116 DIGLMDELEKIAERFREKF 134 >UniRef50_A1ADK0 Putative uncharacterized protein n=2 Tax=Escherichia coli RepID=A1ADK0_ECOK1 Length = 149 Score = 123 bits (309), Expect = 1e-27, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 58/122 (47%), Gaps = 14/122 (11%) Query: 19 DALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPP------ 72 L DFI YK G LP FGRD Y P I+ + H+HLA N F P Sbjct: 28 QTLVDDFIIYKSTGTLPSYFGRDTSYHRP---PDIEDAGLMHLHLAIGENKFEPIKNGTD 84 Query: 73 ----QLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAF 128 Q Q+ +T++ A LVY Q FDE + LIA+ P H A ++N+M + A F Sbjct: 85 ISTPQKLQWHKTSNTA-LVYAQNLFDENRYSLIALFHPVAHMSANNHNRMRVLAGYARDF 143 Query: 129 RM 130 R Sbjct: 144 RN 145 >UniRef50_A1JQH6 Putative uncharacterized protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JQH6_YERE8 Length = 103 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%) Query: 27 SYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHL 86 +K G LP FG + ++D+ F HIHL + + P+PP+L SR +D +L Sbjct: 3 KWKNGGPLPPEFGSEGQWEDNRKL-CDSFVYKIHIHLPD-DPPWPPRLAVASRKSDN-YL 59 Query: 87 VYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRM 130 VY + D + LI+I+ PE H LAR + + ++ + AE F+ Sbjct: 60 VYARHWLDPNKYQLISIMSPEAHALAR-TSYLAELERRAEEFQN 102 >UniRef50_Q7N2M1 Similarities with unknown protein YafO of Escherichia coli n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N2M1_PHOLL Length = 126 Score = 104 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 4/101 (3%) Query: 28 YKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLV 87 +KR +LP +FGRD ++ + L HI + +E P+ Q R +D +LV Sbjct: 27 WKRTALLPSVFGRDGQWEH-NSRTLDSNIYKLHIRMPDEI-PWEKYKPQIDRCSDN-YLV 83 Query: 88 YCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAF 128 Y Q D +++ +I+I+ P+ H+LA+ + + ++ + E F Sbjct: 84 YVQHWMDSKSFQVISIMSPKAHELAK-TSFLTELERRVEEF 123 >UniRef50_C2LNB2 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C2LNB2_PROMI Length = 126 Score = 84.0 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Query: 37 IFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQ 96 G D +++S HI + N + + Q R ++ +LVYCQ Sbjct: 35 YLGADGKWENSAKL-CQSLISKIHIRIPN-EPKWHENMPQIQRKSNH-YLVYCQHWLYPN 91 Query: 97 AWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF 132 + +IAI+ P H+LA+ + + ++ K AE F+ F Sbjct: 92 RYQIIAIMSPNAHELAK-TSFLAELEKRAEEFQNNF 126 >UniRef50_Q2SIU7 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIU7_HAHCH Length = 157 Score = 63.2 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 29/158 (18%) Query: 1 MRVFKTKLIRLQLTAEE-LDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVA 59 ++VF+ IR L L DF +YK G + FGRD LY + L+ +V Sbjct: 3 IKVFEVPKIREARKQNPYLSQLIKDFSAYKNGGFI-SYFGRDTLYLEPR--SLMNDAKVL 59 Query: 60 HIHLANENNPFPPQLRQFSRTNDEA-----------------HLVYCQGAFDEQAWLLIA 102 HIHL +EN+ + ++ ++ E L+Y QG ++ +L++ Sbjct: 60 HIHLLHENHKWYKAQQEAIKSGREPIDNYMLRCDVNPPEFDRALIYTQGRKNKNYYLILD 119 Query: 103 ILKPEPH--------KLARDNNQMHKIGKMAEAFRMRF 132 L H + M ++ K AE FR F Sbjct: 120 FLNGYAHARTTISGKNRLNNTIYMEELVKKAEDFRNAF 157 >UniRef50_Q1V891 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V891_VIBAL Length = 146 Score = 54.0 bits (128), Expect = 1e-06, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 19 DALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHL---------ANENNP 69 D L AD + Y P GRDA D + + H+HL A Sbjct: 23 DELEADLLKYFDRIATPWYLGRDARMDRPDS---AIKAELWHMHLFTPFKKDGSARTERE 79 Query: 70 FPPQ-----LRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKM 124 + + LRQ+ RT+D L+Y +G D + + ++ I P HK M K + Sbjct: 80 WKFERGGRPLRQYYRTSDR-WLIYTRGLMDSEHYCVVGIADPTAHKSCNSPAYMDKFVQA 138 Query: 125 AEAFRMR 131 AE F+ + Sbjct: 139 AEDFKNK 145 >UniRef50_B4F1B8 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B4F1B8_PROMH Length = 136 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 54 KFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLAR 113 F HI N P+ + RQ R +D LV+C+ + + ++AI+ P+ H AR Sbjct: 51 SFIEKVHIRTPN-EKPWDGETRQAVRVSDN-FLVFCKHCMYDDYYQILAIITPDAH--AR 106 Query: 114 DNNQMHKIGKMAEAF 128 + + MAE + Sbjct: 107 SAALLPILADMAETY 121 >UniRef50_Q7N415 Hypothetical gene n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N415_PHOLL Length = 85 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 11/85 (12%) Query: 38 FGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQA 97 F R+ +S W L HI L P+P + +R +D +LVY Q + E Sbjct: 8 FERNMQAMESGIWKL-------HI-LPLNEKPWPTNVMLHNRKSDN-YLVYAQHWYYENH 58 Query: 98 WLLIAILKPEPHKLARDNNQMHKIG 122 + ++A++ P+ H +R + + K+G Sbjct: 59 YQVMAVVMPDAH--SRIDRLLDKLG 81 >UniRef50_Q2SMU2 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMU2_HAHCH Length = 134 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 6/135 (4%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +++F K I Q + + F Y G +FG+D L L E+V H Sbjct: 3 VKLFYGKDIEYQKNIPAVKKVIDAFEYYVETGDPGKMFGKDVLTMSP---KLAWEEKVKH 59 Query: 61 IHLANENN--PFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQM 118 +HL +E LR + +A L+YC G + ++L+ I+ H+ R + Sbjct: 60 VHLLDEKRFRVEKLHLRIQDKRTSDAFLLYCPGYLNPDYYMLLTIIWNNGHEFLRTEEKT 119 Query: 119 HK-IGKMAEAFRMRF 132 K + A FRM++ Sbjct: 120 LKSYAEEALEFRMKW 134 >UniRef50_A6VYA2 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VYA2_MARMS Length = 168 Score = 48.6 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Query: 36 DIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQ----LRQFSRTNDEAHLVYCQG 91 FG+D D + HIH+A + + Q RT+D ++YC+G Sbjct: 72 PYFGKDKPNDRPDEAVY---SDIWHIHIATTSTELNHKNWRNKAQEFRTSDR-FIIYCRG 127 Query: 92 AFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF 132 F++ + ++A+ P H D + A+ FR ++ Sbjct: 128 LFNQNYFCILAVEDPPAHDKLNDAIIQSNMIAAAKRFREKY 168 >UniRef50_B8F4F2 Hypothetical phage protein n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F4F2_HAEPS Length = 140 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 46/99 (46%), Gaps = 6/99 (6%) Query: 35 PDIFGRDALYDDSFTWPLIKFERVAHIHLANEN-NPFPPQLRQFSRTNDEAHLVYCQGAF 93 P G +++ L+ H+ ++ + + + Q SR +D +LVY + F Sbjct: 35 PSTIGNYGRFEE-NPRSLLAGIHKLHVAVSEADFTKWQGKAGQ-SRKSDN-YLVYAKHDF 91 Query: 94 DEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF 132 ++ +L++ + P+ H+ R + + + +AE F+ F Sbjct: 92 EDDVYLILDFISPDAHQ--RIKSVLADLVLIAEEFQETF 128 >UniRef50_B0QWB2 Putative uncharacterized protein n=1 Tax=Haemophilus parasuis 29755 RepID=B0QWB2_HAEPR Length = 143 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 35 PDIFGRDALYDDSFTWPLIKFERVAHIHLANEN-NPFPPQLRQFSRTNDEAHLVYCQGAF 93 PD G +++ ++ + H+ ++NE+ + + Q +R +D +L+Y + Sbjct: 35 PDTIGNWGAFEE-NPRAMLALVKKVHVAVSNEDFERWKKKTGQ-NRKSDN-YLIYTKHEL 91 Query: 94 DEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRM 130 +E +L++ + P+ H+ + +++ I AE F+ Sbjct: 92 EENTFLILDFITPDAHQKIK--SKLSDIVLFAEIFQN 126 >UniRef50_B0BT11 Putative uncharacterized protein n=1 Tax=Actinobacillus pleuropneumoniae serovar 3 str. JL03 RepID=B0BT11_ACTPJ Length = 130 Score = 41.6 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 10/105 (9%) Query: 28 YKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQ----FSRTNDE 83 Y G PD G ++++ P K ++ IH+A + + ++R D Sbjct: 2 YHDTGKYPDFLGHAGGFEEN---PRAKDSQLHKIHIALYAKDWSLSTWRNRNGYNRCCDN 58 Query: 84 AHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAF 128 ++Y + F++ + ++ IL P+ HK ++ MAE F Sbjct: 59 -FIIYVRHFFEDNYFCILDILTPDAHKTVNT--RLATYIDMAENF 100 >UniRef50_B3WIS1 Putative uncharacterized protein n=2 Tax=Escherichia coli RepID=B3WIS1_ECOLX Length = 46 Score = 41.6 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 27/44 (61%) Query: 87 VYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRM 130 +Y QG E + LIAI+ P+ H+ AR ++ M + ++A+ ++ Sbjct: 1 MYVQGELYENKYSLIAIMYPDAHEKARKHDVMSYLARIAQNYKD 44 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q47157 Uncharacterized protein yafO n=33 Tax=Enterobact... 175 5e-43 UniRef50_Q5QV98 Uncharacterized conserved protein, YafO-like n=1... 168 6e-41 UniRef50_C5W1J6 YafO protein (Fragment) n=1 Tax=Escherichia coli... 151 6e-36 UniRef50_Q7N2D4 Similar to unknown protein YafO of Escherichia c... 133 1e-30 UniRef50_Q2SMU2 Putative uncharacterized protein n=1 Tax=Hahella... 120 1e-26 UniRef50_Q2SIU7 Putative uncharacterized protein n=1 Tax=Hahella... 117 1e-25 UniRef50_A1ADK0 Putative uncharacterized protein n=2 Tax=Escheri... 114 9e-25 UniRef50_A1JQH6 Putative uncharacterized protein n=1 Tax=Yersini... 114 1e-24 UniRef50_Q1V891 Putative uncharacterized protein n=1 Tax=Vibrio ... 107 1e-22 UniRef50_Q7N2M1 Similarities with unknown protein YafO of Escher... 104 8e-22 UniRef50_C2LNB2 Putative uncharacterized protein n=2 Tax=Enterob... 100 2e-20 UniRef50_A6VYA2 Putative uncharacterized protein n=1 Tax=Marinom... 91 1e-17 UniRef50_B8F4F2 Hypothetical phage protein n=1 Tax=Haemophilus p... 87 2e-16 UniRef50_B4F1B8 Putative uncharacterized protein n=3 Tax=Enterob... 84 2e-15 UniRef50_B0QWB2 Putative uncharacterized protein n=1 Tax=Haemoph... 84 2e-15 UniRef50_Q7N415 Hypothetical gene n=1 Tax=Photorhabdus luminesce... 75 9e-13 Sequences not found previously or not previously below threshold: UniRef50_B0BT11 Putative uncharacterized protein n=1 Tax=Actinob... 63 3e-09 UniRef50_Q1R957 Putative uncharacterized protein n=3 Tax=root Re... 53 3e-06 UniRef50_B3WIS1 Putative uncharacterized protein n=2 Tax=Escheri... 44 0.002 UniRef50_UPI000197C33D hypothetical protein PretD1_01050 n=1 Tax... 43 0.003 UniRef50_B0QWC0 Putative uncharacterized protein n=1 Tax=Haemoph... 40 0.016 UniRef50_B2VIR4 Putative uncharacterized protein n=2 Tax=Enterob... 40 0.023 UniRef50_C9Y6R1 Putative uncharacterized protein n=1 Tax=Curviba... 39 0.036 UniRef50_A5L0B2 Putative uncharacterized protein n=1 Tax=Vibrion... 39 0.054 UniRef50_D1SSC2 Putative uncharacterized protein n=1 Tax=Acidovo... 39 0.069 >UniRef50_Q47157 Uncharacterized protein yafO n=33 Tax=Enterobacteriaceae RepID=YAFO_ECOLI Length = 132 Score = 175 bits (443), Expect = 5e-43, Method: Composition-based stats. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH Sbjct: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK Sbjct: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 Query: 121 IGKMAEAFRMRF 132 IGKMAEAFRMRF Sbjct: 121 IGKMAEAFRMRF 132 >UniRef50_Q5QV98 Uncharacterized conserved protein, YafO-like n=1 Tax=Idiomarina loihiensis RepID=Q5QV98_IDILO Length = 132 Score = 168 bits (425), Expect = 6e-41, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 1/132 (0%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +RVFK+K IR QLT ELDAL DF YK +PD+FGRD YD T+P+++ V H Sbjct: 2 IRVFKSKQIRQQLTDIELDALVKDFKRYKSGEGVPDLFGRDERYDHPDTFPVLRDNEVMH 61 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 +HL + + P+P QF++ +D HLVYC A +LL+ IL P H A + M Sbjct: 62 LHLQDPDEPWPLHCIQFAKKSD-THLVYCPAAMTPNCYLLMIILDPPAHNKAWSSAVMLP 120 Query: 121 IGKMAEAFRMRF 132 +G MAE FR R+ Sbjct: 121 LGIMAEKFRNRY 132 >UniRef50_C5W1J6 YafO protein (Fragment) n=1 Tax=Escherichia coli BL21 RepID=C5W1J6_ECOBB Length = 133 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 108/132 (81%), Positives = 111/132 (84%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH Sbjct: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 IHLAN NNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAIL + K Sbjct: 61 IHLANVNNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILNLNLINRLEITTKCIK 120 Query: 121 IGKMAEAFRMRF 132 +GK + F F Sbjct: 121 LGKWQKRFACVF 132 >UniRef50_Q7N2D4 Similar to unknown protein YafO of Escherichia coli n=3 Tax=Gammaproteobacteria RepID=Q7N2D4_PHOLL Length = 134 Score = 133 bits (335), Expect = 1e-30, Method: Composition-based stats. Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 13/139 (9%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +R+F ++ L ++ AL DF +YK LP FGRD Y + ++ + Sbjct: 2 VRIFTYSNLKDALGEQKTKALVDDFKAYKEGKGLPITFGRDVPYKFTNNRSYLELQ---- 57 Query: 61 IHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLA-------R 113 HL + F +L QF RT+ LVYC G FD +LLIAI+K H + R Sbjct: 58 -HLHYRESGFSLKLVQFRRTSGYV-LVYCSGFFDRSTYLLIAIIKHWNHNESNDIVGTDR 115 Query: 114 DNNQMHKIGKMAEAFRMRF 132 D M ++ K+AE FR +F Sbjct: 116 DIGLMDELEKIAERFREKF 134 >UniRef50_Q2SMU2 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMU2_HAHCH Length = 134 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 6/135 (4%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +++F K I Q + + F Y G +FG+D L L E+V H Sbjct: 3 VKLFYGKDIEYQKNIPAVKKVIDAFEYYVETGDPGKMFGKDVLTMSP---KLAWEEKVKH 59 Query: 61 IHLANENN--PFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQM 118 +HL +E LR + +A L+YC G + ++L+ I+ H+ R + Sbjct: 60 VHLLDEKRFRVEKLHLRIQDKRTSDAFLLYCPGYLNPDYYMLLTIIWNNGHEFLRTEEKT 119 Query: 119 HK-IGKMAEAFRMRF 132 K + A FRM++ Sbjct: 120 LKSYAEEALEFRMKW 134 >UniRef50_Q2SIU7 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIU7_HAHCH Length = 157 Score = 117 bits (292), Expect = 1e-25, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 29/158 (18%) Query: 1 MRVFKTKLIRLQLTAEE-LDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVA 59 ++VF+ IR L L DF +YK G + FGRD LY + L+ +V Sbjct: 3 IKVFEVPKIREARKQNPYLSQLIKDFSAYKNGGFI-SYFGRDTLYLEP--RSLMNDAKVL 59 Query: 60 HIHLANENNPFPPQLRQFSRTNDEA-----------------HLVYCQGAFDEQAWLLIA 102 HIHL +EN+ + ++ ++ E L+Y QG ++ +L++ Sbjct: 60 HIHLLHENHKWYKAQQEAIKSGREPIDNYMLRCDVNPPEFDRALIYTQGRKNKNYYLILD 119 Query: 103 ILKPEPH--------KLARDNNQMHKIGKMAEAFRMRF 132 L H + M ++ K AE FR F Sbjct: 120 FLNGYAHARTTISGKNRLNNTIYMEELVKKAEDFRNAF 157 >UniRef50_A1ADK0 Putative uncharacterized protein n=2 Tax=Escherichia coli RepID=A1ADK0_ECOK1 Length = 149 Score = 114 bits (285), Expect = 9e-25, Method: Composition-based stats. Identities = 45/123 (36%), Positives = 58/123 (47%), Gaps = 14/123 (11%) Query: 19 DALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPP------ 72 L DFI YK G LP FGRD Y P I+ + H+HLA N F P Sbjct: 28 QTLVDDFIIYKSTGTLPSYFGRDTSYHRP---PDIEDAGLMHLHLAIGENKFEPIKNGTD 84 Query: 73 ----QLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAF 128 Q Q+ +T++ A LVY Q FDE + LIA+ P H A ++N+M + A F Sbjct: 85 ISTPQKLQWHKTSNTA-LVYAQNLFDENRYSLIALFHPVAHMSANNHNRMRVLAGYARDF 143 Query: 129 RMR 131 R Sbjct: 144 RNT 146 >UniRef50_A1JQH6 Putative uncharacterized protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JQH6_YERE8 Length = 103 Score = 114 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 4/106 (3%) Query: 26 ISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAH 85 +K G LP FG + ++D+ F HIHL + + P+PP+L SR +D + Sbjct: 2 EKWKNGGPLPPEFGSEGQWEDNRKL-CDSFVYKIHIHLPD-DPPWPPRLAVASRKSDN-Y 58 Query: 86 LVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMR 131 LVY + D + LI+I+ PE H LAR + + ++ + AE F+ Sbjct: 59 LVYARHWLDPNKYQLISIMSPEAHALAR-TSYLAELERRAEEFQNT 103 >UniRef50_Q1V891 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V891_VIBAL Length = 146 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 19 DALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHL---------ANENNP 69 D L AD + Y P GRDA D + + H+HL A Sbjct: 23 DELEADLLKYFDRIATPWYLGRDARMDRPDS---AIKAELWHMHLFTPFKKDGSARTERE 79 Query: 70 FPPQ-----LRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKM 124 + + LRQ+ RT+D L+Y +G D + + ++ I P HK M K + Sbjct: 80 WKFERGGRPLRQYYRTSDR-WLIYTRGLMDSEHYCVVGIADPTAHKSCNSPAYMDKFVQA 138 Query: 125 AEAFRMR 131 AE F+ + Sbjct: 139 AEDFKNK 145 >UniRef50_Q7N2M1 Similarities with unknown protein YafO of Escherichia coli n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N2M1_PHOLL Length = 126 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 4/104 (3%) Query: 25 FISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEA 84 +KR +LP +FGRD ++ + L HI + +E P+ Q R +D Sbjct: 24 LEHWKRTALLPSVFGRDGQWEH-NSRTLDSNIYKLHIRMPDEI-PWEKYKPQIDRCSDN- 80 Query: 85 HLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAF 128 +LVY Q D +++ +I+I+ P+ H+LA+ + + ++ + E F Sbjct: 81 YLVYVQHWMDSKSFQVISIMSPKAHELAK-TSFLTELERRVEEF 123 >UniRef50_C2LNB2 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C2LNB2_PROMI Length = 126 Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Query: 37 IFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQ 96 G D +++S HI + N + + Q R ++ +LVYCQ Sbjct: 35 YLGADGKWENSAKL-CQSLISKIHIRIPN-EPKWHENMPQIQRKSNH-YLVYCQHWLYPN 91 Query: 97 AWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF 132 + +IAI+ P H+LA+ + + ++ K AE F+ F Sbjct: 92 RYQIIAIMSPNAHELAK-TSFLAELEKRAEEFQNNF 126 >UniRef50_A6VYA2 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VYA2_MARMS Length = 168 Score = 90.9 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Query: 36 DIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQ----LRQFSRTNDEAHLVYCQG 91 FG+D D + HIH+A + + Q RT+D ++YC+G Sbjct: 72 PYFGKDKPNDRPDEAVY---SDIWHIHIATTSTELNHKNWRNKAQEFRTSDR-FIIYCRG 127 Query: 92 AFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF 132 F++ + ++A+ P H D + A+ FR ++ Sbjct: 128 LFNQNYFCILAVEDPPAHDKLNDAIIQSNMIAAAKRFREKY 168 >UniRef50_B8F4F2 Hypothetical phage protein n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F4F2_HAEPS Length = 140 Score = 86.7 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 7/132 (5%) Query: 2 RVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHI 61 +VF + L L F + R P G +++ L+ H+ Sbjct: 3 KVFVHPRLTLLEPLRPLAEGLLTFEASYRQIY-PSTIGNYGRFEE-NPRSLLAGIHKLHV 60 Query: 62 HLANEN-NPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK 120 ++ + + + Q SR +D +LVY + F++ +L++ + P+ H+ R + + Sbjct: 61 AVSEADFTKWQGKAGQ-SRKSDN-YLVYAKHDFEDDVYLILDFISPDAHQ--RIKSVLAD 116 Query: 121 IGKMAEAFRMRF 132 + +AE F+ F Sbjct: 117 LVLIAEEFQETF 128 >UniRef50_B4F1B8 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B4F1B8_PROMH Length = 136 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 5/99 (5%) Query: 30 RDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYC 89 L G+ A + +S F HI N P+ + RQ R +D LV+C Sbjct: 28 NGSSLSGYVGKFADFRNSAIAR-QSFIEKVHIRTPN-EKPWDGETRQAVRVSDN-FLVFC 84 Query: 90 QGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAF 128 + + + ++AI+ P+ H AR + + MAE + Sbjct: 85 KHCMYDDYYQILAIITPDAH--ARSAALLPILADMAETY 121 >UniRef50_B0QWB2 Putative uncharacterized protein n=1 Tax=Haemophilus parasuis 29755 RepID=B0QWB2_HAEPR Length = 143 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 54/116 (46%), Gaps = 8/116 (6%) Query: 18 LDALTADFISYKR--DGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANEN-NPFPPQL 74 L L D + ++ PD G +++ ++ + H+ ++NE+ + + Sbjct: 16 LAKLINDLMLLEQSMGHFRPDTIGNWGAFEE-NPRAMLALVKKVHVAVSNEDFERWKKKT 74 Query: 75 RQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRM 130 Q +R +D +L+Y + +E +L++ + P+ H+ + +++ I AE F+ Sbjct: 75 GQ-NRKSDN-YLIYTKHELEENTFLILDFITPDAHQKIK--SKLSDIVLFAEIFQN 126 >UniRef50_Q7N415 Hypothetical gene n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N415_PHOLL Length = 85 Score = 74.8 bits (182), Expect = 9e-13, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 11/85 (12%) Query: 38 FGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQA 97 F R+ +S W L HI L P+P + +R +D +LVY Q + E Sbjct: 8 FERNMQAMESGIWKL-------HI-LPLNEKPWPTNVMLHNRKSDN-YLVYAQHWYYENH 58 Query: 98 WLLIAILKPEPHKLARDNNQMHKIG 122 + ++A++ P+ H +R + + K+G Sbjct: 59 YQVMAVVMPDAH--SRIDRLLDKLG 81 >UniRef50_B0BT11 Putative uncharacterized protein n=1 Tax=Actinobacillus pleuropneumoniae serovar 3 str. JL03 RepID=B0BT11_ACTPJ Length = 130 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 8/104 (7%) Query: 28 YKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANEN---NPFPPQLRQFSRTNDEA 84 Y G PD G +++ HI L ++ + + + ++R D Sbjct: 2 YHDTGKYPDFLGHAGGFEE-NPRAKDSQLHKIHIALYAKDWSLSTWRNRNG-YNRCCDN- 58 Query: 85 HLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAF 128 ++Y + F++ + ++ IL P+ HK ++ MAE F Sbjct: 59 FIIYVRHFFEDNYFCILDILTPDAHKTVNT--RLATYIDMAENF 100 >UniRef50_Q1R957 Putative uncharacterized protein n=3 Tax=root RepID=Q1R957_ECOUT Length = 139 Score = 53.2 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 5/108 (4%) Query: 23 ADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTND 82 +YK G + G+ ++ ++ +HI + ++P+ R +D Sbjct: 22 KALANYKNRGTVSAYLGKIGGFER-NHHAVLSGIYKSHIRIPGVDDPWLRTTPIHRRVSD 80 Query: 83 EAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAE-AFR 129 L++ +IAI+KP+ H+ + + I + E F+ Sbjct: 81 N-FLIFAVHNTYPIHIQIIAIIKPDGHEKVK--KLLPAIIDITEKRFQ 125 >UniRef50_B3WIS1 Putative uncharacterized protein n=2 Tax=Escherichia coli RepID=B3WIS1_ECOLX Length = 46 Score = 43.6 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 27/44 (61%) Query: 87 VYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRM 130 +Y QG E + LIAI+ P+ H+ AR ++ M + ++A+ ++ Sbjct: 1 MYVQGELYENKYSLIAIMYPDAHEKARKHDVMSYLARIAQNYKD 44 >UniRef50_UPI000197C33D hypothetical protein PretD1_01050 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C33D Length = 186 Score = 42.8 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 20/147 (13%) Query: 2 RVFKTKLIRLQ-LTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH 60 +V+ T+ L E L F ++ G P G+D + K R AH Sbjct: 18 KVYHTQDFADACLNCEGLKEYADAFKAFWLTGYHPS-IGKDIETRKPREMLIDKHVRHAH 76 Query: 61 IHLANENNPFPPQLRQFSRTN----------------DEAHLVYCQGAFDEQAWLLIAIL 104 + N + ++++ +A+L+Y D++ +LI+ + Sbjct: 77 VDTGNYAPEENKKHPNATKSSWLIWRTQIELAKVEPTSDAYLIYAVN--DKRDAILISFI 134 Query: 105 KPEPHKLARDNNQMHKIGKMAEAFRMR 131 + HK + + + I + A+ F + Sbjct: 135 EDGAHKKSEEAQYLEYIMEKADFFYEK 161 >UniRef50_B0QWC0 Putative uncharacterized protein n=1 Tax=Haemophilus parasuis 29755 RepID=B0QWC0_HAEPR Length = 139 Score = 40.5 bits (93), Expect = 0.016, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 23/141 (16%) Query: 1 MRVFKTKLIRLQLTAEELDAL-TADFISYKRDGVLPDI-FGRDALYDDSFTWPLIKFERV 58 M V T+L + + EE F +K++G FG+D Y + Sbjct: 1 MNVAYTQLFNMAFSDEEDKQFFIEQFKYWKQNGENSSYHFGKDGFY-------TPIQSGL 53 Query: 59 AHIHLANENN-----PFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAIL-KPEPHKLA 112 H+HL N + + R + LVY + D +LLI IL +P HK+A Sbjct: 54 RHVHLVPVINILDKINWDKHWQTGQRRTSDTCLVYVE---DGSDYLLITILPEPLAHKIA 110 Query: 113 -----RDNNQMHKIGKMAEAF 128 M +AE F Sbjct: 111 AQREENHRVIMKHFRHIAEQF 131 >UniRef50_B2VIR4 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=B2VIR4_ERWT9 Length = 155 Score = 40.1 bits (92), Expect = 0.023, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 11/100 (11%) Query: 36 DIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQ---LRQFSRTNDEAHLVYCQGA 92 D GRD L + P + E + H+H+ E + + Q++ T+D +++VY Sbjct: 57 DTIGRDKLMERP---PTARAEDLHHVHIWQEGCCWEDEHGLKVQWASTSD-SYVVY-SYF 111 Query: 93 FDEQ---AWLLIAILKPEPHKLARDNNQMHKIGKMAEAFR 129 D + +I + H L D Q+ + A+ FR Sbjct: 112 IDRDKDHHFYVIDYCQDAAHALIEDRCQILAWIEQAKKFR 151 >UniRef50_C9Y6R1 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y6R1_9BURK Length = 136 Score = 39.3 bits (90), Expect = 0.036, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 26/140 (18%) Query: 1 MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDI-FGRDALYDDSFTWPLIKFERVA 59 +R+ ++LQ + + L F +K G FG+ + Sbjct: 4 VRMTSQLTLKLQGSQLTPNLLITRFKEWKLGGEYGSYWFGQTK-----------TENDLT 52 Query: 60 HIHLA-----NENNPFPP--QLRQFSRTNDEAHLVYCQGAFDEQA-WLLIA-ILKPEPHK 110 H H+A + + RQ R + +++Y +++ +LLI I P H Sbjct: 53 HTHMAPVTPGETKDKWDYFWSQRQPHRRRSDCYVLYA---YEKNHGYLLIDVIFDPGAHD 109 Query: 111 LARDNNQ--MHKIGKMAEAF 128 L + + + +A+ F Sbjct: 110 LWKPEAKQQLLNYEIVADNF 129 >UniRef50_A5L0B2 Putative uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L0B2_9GAMM Length = 147 Score = 38.9 bits (89), Expect = 0.054, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 31/109 (28%), Gaps = 14/109 (12%) Query: 31 DGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLAN-------ENNPFPPQLRQFSRTNDE 83 + G+ + + H+ + + + RT+D Sbjct: 38 GEMPVPYLGKTDAFHFP-QAVVDADLSKIHVFDPTCTNFTKADQDSWKRATNLRGRTSD- 95 Query: 84 AHLVYCQGAFDEQAWLLIAILKPEPHKLARDN----NQMHKIGKMAEAF 128 +LVY + F+E + ++ P H + + A F Sbjct: 96 TYLVYTKDYFNEHHCYFVGMISP-AHTKCDVRKSGMSWFGPLVDEANKF 143 >UniRef50_D1SSC2 Putative uncharacterized protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SSC2_9BURK Length = 137 Score = 38.5 bits (88), Expect = 0.069, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 46/135 (34%), Gaps = 19/135 (14%) Query: 12 QLTAEELDALTADFISYKRDGVLPD----IFGRDALYDDSFTWPLIKFERVAHIHLANEN 67 Q + + A+F +K G + FG+D Y ++ + H+HL + Sbjct: 2 QENGLDAEVFAAEFDHWKSLGGAGEDESYFFGKDGGYRIPKVG--LEQYALRHVHLVPVS 59 Query: 68 -----NPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILK-PEPHKLAR-----DNN 116 + + R + HLVY LL+ IL P H +A D Sbjct: 60 DLVALKKWDRAWGEGWRRTSDRHLVYTSDGTYG--HLLMWILDEPGSHDIANMQTEEDRE 117 Query: 117 QMHKIGKMAEAFRMR 131 M +A FR Sbjct: 118 LMQGFATVAYHFRQT 132 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.130 0.349 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 695,210,335 Number of Sequences: 3077464 Number of extensions: 24168376 Number of successful extensions: 74162 Number of sequences better than 1.0e-01: 25 Number of HSP's better than 0.1 without gapping: 33 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 74067 Number of HSP's gapped (non-prelim): 54 length of query: 132 length of database: 1,040,396,356 effective HSP length: 97 effective length of query: 35 effective length of database: 741,882,348 effective search space: 25965882180 effective search space used: 25965882180 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.9 bits) S2: 87 (38.2 bits)