Phyre 2 Results for P37757

Email | l.a.kelley@imperial.ac.uk
Description | P37757
Date | Thu Jan 5 11:57:29 GMT 2012
Unique Job ID | 846e28bc1a63b25d

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1qy9B_ |
|  | 100.0 | 98 | PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein ydde; PDBTitle: crystal structure of e. coli se-met protein ydde
2 | c3ednB_ |
|  | 100.0 | 32 | PDB header:biosynthetic protein Chain: B: PDB Molecule:phenazine biosynthesis protein, phzf family; PDBTitle: crystal structure of the bacillus anthracis phenazine2 biosynthesis protein, phzf family
3 | c1ym5A_ |
|  | 100.0 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical 32.6 kda protein in dap2-slt2 PDBTitle: crystal structure of yhi9, the yeast member of the2 phenazine biosynthesis phzf enzyme superfamily.
4 | c1u1wA_ |
|  | 100.0 | 30 | PDB header:isomerase, lyase Chain: A: PDB Molecule:phenazine biosynthesis protein phzf; PDBTitle: structure and function of phenazine-biosynthesis protein phzf from2 pseudomonas fluorescens 2-79
5 | c1u0kA_ |
|  | 100.0 | 25 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gene product pa4716; PDBTitle: the structure of a predicted epimerase pa4716 from pseudomonas2 aeruginosa
6 | d1s7ja_ |
|  | 100.0 | 31 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like
7 | c3ekmE_ |
|  | 100.0 | 16 | PDB header:isomerase Chain: E: PDB Molecule:diaminopimelate epimerase, chloroplastic; PDBTitle: crystal structure of diaminopimelate epimerase form2 arabidopsis thaliana in complex with irreversible inhibitor3 dl-azidap
8 | c2otnB_ |
|  | 100.0 | 16 | PDB header:isomerase Chain: B: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of the catalytically active form of diaminopimelate2 epimerase from bacillus anthracis
9 | c2gkjA_ |
|  | 100.0 | 15 | PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase in complex2 with an irreversible inhibitor dl-azidap
10 | c2azpA_ |
|  | 100.0 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pa1268; PDBTitle: crystal structure of pa1268 solved by sulfur sad
11 | c1w62B_ |
|  | 100.0 | 13 | PDB header:racemase Chain: B: PDB Molecule:b-cell mitogen; PDBTitle: proline racemase in complex with one molecule of pyrrole-2-2 carboxylic acid (hemi form)
12 | d1qy9a1 |
|  | 100.0 | 99 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like
13 | c3fveA_ |
|  | 100.0 | 16 | PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase mycobacterium2 tuberculosis dapf
14 | d1u0ka1 |
|  | 100.0 | 26 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like
15 | d1xuba1 |
|  | 100.0 | 33 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like
16 | d1qy9a2 |
|  | 100.0 | 98 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like
17 | d1tm0a_ |
|  | 100.0 | 14 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Proline racemase
18 | d1xuba2 |
|  | 100.0 | 30 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like
19 | d1u0ka2 |
|  | 99.9 | 30 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like
20 | d2gkea1 |
|  | 99.9 | 20 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Diaminopimelate epimerase
21 | d2gkea2 |
| not modelled | 99.8 | 13 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Diaminopimelate epimerase
22 | c3g7kD_ |
| not modelled | 98.2 | 16 | PDB header:isomerase Chain: D: PDB Molecule:3-methylitaconate isomerase; PDBTitle: crystal structure of methylitaconate-delta-isomerase
23 | c2pw0A_ |
| not modelled | 98.1 | 18 | PDB header:unknown function Chain: A: PDB Molecule:prpf methylaconitate isomerase; PDBTitle: crystal structure of trans-aconitate bound to methylaconitate2 isomerase prpf from shewanella oneidensis
24 | d2h9fa2 |
| not modelled | 96.0 | 23 | Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PA0793-like
25 | c3ldgA_ |
| not modelled | 40.2 | 18 | PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein smu.472; PDBTitle: crystal structure of smu.472, a putative methyltransferase complexed2 with sah
26 | c3k0bA_ |
| not modelled | 38.8 | 18 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase; PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365
27 | d1g60a_ |
| not modelled | 36.5 | 19 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Type II DNA methylase
28 | d1booa_ |
| not modelled | 33.8 | 13 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Type II DNA methylase
29 | c2zifB_ |
| not modelled | 32.7 | 23 | PDB header:transferase Chain: B: PDB Molecule:putative modification methylase; PDBTitle: crystal structure of ttha0409, putative dna modification2 methylase from thermus thermophilus hb8- complexed with s-3 adenosyl-l-methionine
30 | d1euza2 |
| not modelled | 31.7 | 26 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases
31 | d1bgva2 |
| not modelled | 31.5 | 19 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases
32 | d1v9la2 |
| not modelled | 31.0 | 19 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases
33 | c1nw6A_ |
| not modelled | 29.6 | 19 | PDB header:transferase Chain: A: PDB Molecule:modification methylase rsri; PDBTitle: structure of the beta class n6-adenine dna methyltransferase rsri2 bound to sinefungin
34 | d1o9ga_ |
| not modelled | 28.7 | 27 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:rRNA methyltransferase AviRa
35 | d1gtma2 |
| not modelled | 26.6 | 23 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases
36 | d1eg2a_ |
| not modelled | 24.2 | 17 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Type II DNA methylase
37 | c3lduA_ |
| not modelled | 23.6 | 26 | PDB header:transferase Chain: A: PDB Molecule:putative methylase; PDBTitle: the crystal structure of a possible methylase from2 clostridium difficile 630.
38 | d1bvua2 |
| not modelled | 23.4 | 23 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases
39 | d2ar0a1 |
| not modelled | 22.3 | 36 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like
40 | d2fug21 |
| not modelled | 21.7 | 14 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:NQO2-like
41 | d1b26a2 |
| not modelled | 21.7 | 26 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases
42 | c2waqG_ |
| not modelled | 20.6 | 27 | PDB header:transcription Chain: G: PDB Molecule:dna-directed rna polymerase rpo8 subunit; PDBTitle: the complete structure of the archaeal 13-subunit dna-2 directed rna polymerase
43 | c3khkA_ |
| not modelled | 20.2 | 21 | PDB header:dna binding protein Chain: A: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of type-i restriction-modification system2 methylation subunit (mm_0429) from methanosarchina mazei.
44 | d1hwxa2 |
| not modelled | 19.3 | 29 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases
45 | d2okca1 |
| not modelled | 17.8 | 29 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like
46 | c2l3bA_ |
| not modelled | 17.4 | 33 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein found in conjugate transposon; PDBTitle: solution nmr structure of the bt_0084 lipoprotein from bacteroides2 thetaiotaomicron, northeast structural genomics consortium target3 btr376
47 | d2f8la1 |
| not modelled | 17.2 | 36 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like
48 | c2l7qA_ |
| not modelled | 16.3 | 27 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein found in conjugate transposon; PDBTitle: solution nmr structure of conjugate transposon protein bvu_1572(27-2 141) from bacteroides vulgatus, northeast structural genomics3 consortium target bvr155
49 | c3p9nA_ |
| not modelled | 16.1 | 21 | PDB header:transferase Chain: A: PDB Molecule:possible methyltransferase (methylase); PDBTitle: rv2966c of m. tuberculosis is a rsmd-like methyltransferase
50 | c1g38A_ |
| not modelled | 15.4 | 7 | PDB header:transferase/dna Chain: A: PDB Molecule:modification methylase taqi; PDBTitle: adenine-specific methyltransferase m. taq i/dna complex
51 | c3sb1B_ |
| not modelled | 15.4 | 23 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hydrogenase expression protein; PDBTitle: hydrogenase expression protein huph from thiobacillus denitrificans2 atcc 25259
52 | c1aqjB_ |
| not modelled | 15.4 | 7 | PDB header:methyltransferase Chain: B: PDB Molecule:adenine-n6-dna-methyltransferase taqi; PDBTitle: structure of adenine-n6-dna-methyltransferase taqi
53 | d1uhsa_ |
| not modelled | 15.2 | 35 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
54 | d2ih2a1 |
| not modelled | 14.0 | 7 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:DNA methylase TaqI, N-terminal domain
55 | d1l1fa2 |
| not modelled | 14.0 | 29 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases
56 | c3lkdB_ |
| not modelled | 13.5 | 21 | PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80
57 | d1s7ea1 |
| not modelled | 13.2 | 24 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
58 | d1j6ua1 |
| not modelled | 13.1 | 12 | Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain
59 | d1ko7a1 |
| not modelled | 13.1 | 13 | Fold:MurF and HprK N-domain-like Superfamily:HprK N-terminal domain-like Family:HPr kinase/phoshatase HprK N-terminal domain
60 | d2p81a1 |
| not modelled | 12.2 | 41 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
61 | c3itcA_ |
| not modelled | 12.2 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:renal dipeptidase; PDBTitle: crystal structure of sco3058 with bound citrate and glycerol
62 | c3k8zD_ |
| not modelled | 11.8 | 19 | PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis
63 | d1pjza_ |
| not modelled | 11.7 | 24 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Thiopurine S-methyltransferase
64 | c3c6vB_ |
| not modelled | 11.2 | 15 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:probable tautomerase/dehalogenase au4130; PDBTitle: crystal structure of au4130/apc7354, a probable enzyme from the2 thermophilic fungus aspergillus fumigatus
65 | c1v9lA_ |
| not modelled | 11.0 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad
66 | d1e3oc1 |
| not modelled | 11.0 | 24 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
67 | d1knxa1 |
| not modelled | 10.9 | 3 | Fold:MurF and HprK N-domain-like Superfamily:HprK N-terminal domain-like Family:HPr kinase/phoshatase HprK N-terminal domain
68 | d1wy7a1 |
| not modelled | 10.8 | 33 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Ta1320-like
69 | c2i5gB_ |
| not modelled | 10.6 | 23 | PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal strcuture of amidohydrolase from pseudomonas2 aeruginosa
70 | c1bvuF_ |
| not modelled | 10.4 | 23 | PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis
71 | c2vi6F_ |
| not modelled | 10.3 | 41 | PDB header:transcription Chain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain
72 | c2da4A_ |
| not modelled | 10.3 | 18 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dkfzp686k21156; PDBTitle: solution structure of the homeobox domain of the2 hypothetical protein, dkfzp686k21156
73 | c3lu2B_ |
| not modelled | 10.2 | 14 | PDB header:hydrolase Chain: B: PDB Molecule:lmo2462 protein; PDBTitle: structure of lmo2462, a listeria monocytogenes amidohydrolase family2 putative dipeptidase
74 | d1o4xa1 |
| not modelled | 10.1 | 18 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
75 | c3s1sA_ |
| not modelled | 10.0 | 29 | PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi
76 | d1p7ia_ |
| not modelled | 9.8 | 41 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
77 | c2da2A_ |
| not modelled | 9.7 | 5 | PDB header:transcription Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the second homeobox domain of at-2 binding transcription factor 1 (atbf1)
78 | c2tmgD_ |
| not modelled | 9.5 | 26 | PDB header:oxidoreductase Chain: D: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: thermotoga maritima glutamate dehydrogenase mutant s128r,2 t158e, n117r, s160e
79 | d1ne2a_ |
| not modelled | 9.4 | 36 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Ta1320-like
80 | d2hi3a1 |
| not modelled | 9.3 | 35 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
81 | d1ws6a1 |
| not modelled | 9.3 | 29 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:YhhF-like
82 | c2da1A_ |
| not modelled | 9.2 | 29 | PDB header:transcription Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the first homeobox domain of at-2 binding transcription factor 1 (atbf1)
83 | d2ifta1 |
| not modelled | 9.0 | 21 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:YhhF-like
84 | c2yfqA_ |
| not modelled | 9.0 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase from2 peptoniphilus asaccharolyticus
85 | c2l9rA_ |
| not modelled | 8.9 | 29 | PDB header:transcription Chain: A: PDB Molecule:homeobox protein nkx-3.1; PDBTitle: solution nmr structure of homeobox domain of homeobox protein nkx-3.12 from homo sapiens, northeast structural genomics consortium target3 hr6470a
86 | d2cqxa1 |
| not modelled | 8.8 | 18 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
87 | c2ragB_ |
| not modelled | 8.8 | 27 | PDB header:hydrolase Chain: B: PDB Molecule:dipeptidase; PDBTitle: crystal structure of aminohydrolase from caulobacter crescentus
88 | d2cuea1 |
| not modelled | 8.7 | 12 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
89 | c3aogA_ |
| not modelled | 8.7 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form)
90 | d1au7a1 |
| not modelled | 8.6 | 20 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
91 | c2dmuA_ |
| not modelled | 8.5 | 15 | PDB header:dna binding protein Chain: A: PDB Molecule:homeobox protein goosecoid; PDBTitle: solution structure of the homeobox domain of homeobox2 protein goosecoid
92 | d1jgga_ |
| not modelled | 8.5 | 24 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
93 | d2j85a1 |
| not modelled | 8.5 | 20 | Fold:STIV B116-like Superfamily:STIV B116-like Family:STIV B116-like
94 | c3fdgA_ |
| not modelled | 8.4 | 27 | PDB header:hydrolase Chain: A: PDB Molecule:dipeptidase ac. metallo peptidase. merops family m19; PDBTitle: the crystal structure of the dipeptidase ac, metallo peptidase. merops2 family m19
95 | d2hddb_ |
| not modelled | 8.1 | 41 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
96 | d1f43a_ |
| not modelled | 8.1 | 18 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
97 | d1le8a_ |
| not modelled | 8.0 | 15 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
98 | d1ztra1 |
| not modelled | 7.9 | 41 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain
99 | c1ko7B_ |
| not modelled | 7.9 | 13 | PDB header:transferase,hydrolase Chain: B: PDB Molecule:hpr kinase/phosphatase; PDBTitle: x-ray structure of the hpr kinase/phosphatase from2 staphylococcus xylosus at 1.95 a resolution