Phyre 2 alignment of P16433 with c3ikbB_

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Job Description | P16433
Confidence | 23.75% | Date | Thu Jan 5 11:35:09 GMT 2012
Rank | 28 | Aligned Residues | 27
% Identity | 15% | Template | c3ikbB_
PDB info | PDB header:structural genomics, unknown function | Chain: B: PDB Molecule:uncharacterized conserved protein; | PDBTitle: the structure of a conserved protein from streptococcus2 mutans ua159.
Resolution | 1.67 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 90 | . | . | . | . | . | . | . | . | . | 100 | . |  | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | A | M | R | S | P | A | L | R | A | W | Q | . | S | A | P | D | P | K | I | C | I | S | Y | G | A | C | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | G | F | A | Q | K | W | H | Q | P | I | L | D | L | L | P | D | I | Q | L | T | I | L | I | G | N | Y | A
Template Known Secondary structure |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T |  | T | T |  |  |  |  |  |  |  | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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