16/01/2012 15:24:14 : INFO  : Run start: Mon Jan 16 15:24:14 GMT 2012
16/01/2012 15:24:14 : INFO  : Initialised job
16/01/2012 15:24:15 : INFO  : Renaming log file 'phyre2_20120116_152414.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/846d9a7ae17a6117/phyre_20120116_152414.log'
16/01/2012 15:24:15 : INFO  : Initialised job:
Sequence
>batch____
MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLS
PLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGG
IFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPA
EILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGEEQVARWLEAENDPRLNE
IVSHLNHVVEEARIR

16/01/2012 15:24:15 : INFO  : Checked sequence
16/01/2012 15:24:15 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 15:24:15 : INFO  : PSI-BLAST 3 iterations
16/01/2012 15:25:40 : INFO  : PSI-BLAST 5 iterations
16/01/2012 15:26:56 : INFO  : Finished PSI-BLAST
16/01/2012 15:26:56 : INFO  : Running Buildali to generate a3m file
16/01/2012 15:30:52 : INFO  : Converting to HMM
16/01/2012 15:30:52 : INFO  : Calibrating HMM
16/01/2012 15:30:59 : INFO  : Searching HMM database
16/01/2012 15:35:52 : INFO  : Finished buildali
16/01/2012 15:35:52 : INFO  : Predicting secondary structure
16/01/2012 15:35:52 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 15:35:52 : INFO  : Predicting Disordered regions
16/01/2012 15:35:52 : INFO  : Predicted Disorder (Disopred)
16/01/2012 15:35:52 : INFO  : Running memsat_svm check
16/01/2012 15:36:35 : INFO  : Globular protein
16/01/2012 15:36:35 : INFO  : Predicted Transmembrane (memsat_svm) ID '846d9a7ae17a6117'
16/01/2012 15:36:35 : INFO  : Initialising fold library search
16/01/2012 15:36:35 : INFO  : Initialised search input
16/01/2012 15:36:35 : INFO  : Building Ensemble models
16/01/2012 15:36:36 : INFO  : Building hh.d2fug61.model.1.pdb
16/01/2012 15:36:37 : INFO  : Building hh.c2d1eA_.model.2.pdb
16/01/2012 15:36:38 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/846d9a7ae17a6117/hh.c2d1eA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/846d9a7ae17a6117/c2d1eA_.14.pdb
16/01/2012 15:36:38 : INFO  : Building d2fug61.1.pdb
16/01/2012 15:36:39 : INFO  : Building d1frfs_.2.pdb
16/01/2012 15:36:40 : INFO  : Building d1e3da_.3.pdb
16/01/2012 15:36:40 : INFO  : Building d1wuis1.4.pdb
16/01/2012 15:36:41 : INFO  : Building c1h2aS_.5.pdb
16/01/2012 15:36:41 : INFO  : Building c3rgwS_.6.pdb
16/01/2012 15:36:42 : INFO  : Building d1yq9a1.7.pdb
16/01/2012 15:36:42 : INFO  : Building d1cc1s_.8.pdb
16/01/2012 15:36:43 : INFO  : Building c3myrE_.9.pdb
16/01/2012 15:36:43 : INFO  : Building c2wpnA_.10.pdb
16/01/2012 15:36:44 : INFO  : Building c2v4jA_.11.pdb
16/01/2012 15:36:44 : INFO  : Building d2dlda2.12.pdb
16/01/2012 15:36:45 : INFO  : Building d1e5da1.13.pdb
16/01/2012 15:36:45 : INFO  : Building c2d1eA_.14.pdb
16/01/2012 15:36:45 : INFO  : Building c3rl4A_.15.pdb
16/01/2012 15:36:46 : INFO  : Building d1vmea1.16.pdb
16/01/2012 15:36:46 : INFO  : Building c2d3yA_.17.pdb
16/01/2012 15:36:46 : INFO  : Building c2r47C_.18.pdb
16/01/2012 15:36:51 : INFO  : Building d1sqsa_.19.pdb
16/01/2012 15:36:51 : INFO  : Building c2z1dA_.20.pdb
16/01/2012 15:36:56 : INFO  : Finished HH model building
16/01/2012 15:36:56 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 15:36:59 : INFO  : html domain output complete ID '846d9a7ae17a6117'
16/01/2012 16:01:43 : INFO  : Run end  : Mon Jan 16 16:01:43 GMT 2012
