Phyre 2 alignment of P16433 with c1vddC_

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Job Description | P16433
Confidence | 11.25% | Date | Thu Jan 5 11:35:09 GMT 2012
Rank | 93 | Aligned Residues | 24
% Identity | 29% | Template | c1vddC_
PDB info | PDB header:recombination | Chain: C: PDB Molecule:recombination protein recr; | PDBTitle: crystal structure of recombinational repair protein recr
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |  |  |  |  | . | . | . | . | . | . | . | 140 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | I | F | H | D | L | Y | C | V | W | G | G | T | . | . | . | . | D | K | I | V | P | V | D | V | Y | I | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | E | Y | R | G | L | Y | H | V | L | H | G | V | L | S | P | M | N | G | V | G | P | D | K | L | H | I | K
Template Known Secondary structure |  | T |  |  |  | S |  |  |  |  |  | S | S |  |  | B | T | T | T | T | B |  | G | G | G | S |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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