Phyre 2 Results for P16433

Email | l.a.kelley@imperial.ac.uk
Description | P16433
Date | Thu Jan 5 11:35:09 GMT 2012
Unique Job ID | 846d9a7ae17a6117

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d2fug61 |
|  | 100.0 | 36 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nq06-like
2 | d1frfs_ |
|  | 99.9 | 22 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
3 | d1e3da_ |
|  | 99.9 | 22 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
4 | d1wuis1 |
|  | 99.9 | 21 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
5 | c1h2aS_ |
|  | 99.9 | 21 | PDB header:oxidoreductase Chain: S: PDB Molecule:hydrogenase; PDBTitle: single crystals of hydrogenase from desulfovibrio vulgaris
6 | c3rgwS_ |
|  | 99.9 | 24 | PDB header:oxidoreductase/oxidoreductase Chain: S: PDB Molecule:membrane-bound hydrogenase (nife) small subunit hoxk; PDBTitle: crystal structure at 1.5 a resolution of an h2-reduced, o2-tolerant2 hydrogenase from ralstonia eutropha unmasks a novel iron-sulfur3 cluster
7 | d1yq9a1 |
|  | 99.9 | 21 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
8 | d1cc1s_ |
|  | 99.9 | 26 | Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit
9 | c3myrE_ |
|  | 99.9 | 22 | PDB header:oxidoreductase Chain: E: PDB Molecule:hydrogenase (nife) small subunit hyda; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state
10 | c2wpnA_ |
|  | 99.8 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [nifese] hydrogenase, small subunit; PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough
11 | c2v4jA_ |
|  | 69.5 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration
12 | d2dlda2 |
|  | 66.9 | 14 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain
13 | d1e5da1 |
|  | 65.7 | 16 | Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related
14 | c2d1eA_ |
|  | 56.3 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:phycocyanobilin:ferredoxin oxidoreductase; PDBTitle: crystal structure of pcya-biliverdin complex
15 | c3rl4A_ |
|  | 54.9 | 24 | PDB header:hydrolase Chain: A: PDB Molecule:metallophosphoesterase mpped2; PDBTitle: rat metallophosphodiesterase mpped2 g252h mutant
16 | d1vmea1 |
|  | 50.0 | 13 | Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related
17 | c2d3yA_ |
|  | 43.9 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:uracil-dna glycosylase; PDBTitle: crystal structure of uracil-dna glycosylase from thermus thermophilus2 hb8
18 | c2r47C_ |
|  | 41.3 | 17 | PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein mth_862; PDBTitle: crystal structure of mth_862 protein of unknown function from2 methanothermobacter thermautotrophicus
19 | d1sqsa_ |
|  | 39.3 | 11 | Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Hypothetical protein SP1951
20 | c2z1dA_ |
|  | 38.1 | 18 | PDB header:metal binding protein Chain: A: PDB Molecule:hydrogenase expression/formation protein hypd; PDBTitle: crystal structure of [nife] hydrogenase maturation protein, hypd from2 thermococcus kodakaraensis
21 | c3trhI_ |
| not modelled | 31.9 | 25 | PDB header:lyase Chain: I: PDB Molecule:phosphoribosylaminoimidazole carboxylase PDBTitle: structure of a phosphoribosylaminoimidazole carboxylase catalytic2 subunit (pure) from coxiella burnetii
22 | c3klbA_ |
| not modelled | 28.6 | 19 | PDB header:flavoprotein Chain: A: PDB Molecule:putative flavoprotein; PDBTitle: crystal structure of putative flavoprotein in complex with fmn2 (yp_213683.1) from bacteroides fragilis nctc 9343 at 1.75 a3 resolution
23 | c1coyA_ |
| not modelled | 27.9 | 15 | PDB header:oxidoreductase(oxygen receptor) Chain: A: PDB Molecule:cholesterol oxidase; PDBTitle: crystal structure of cholesterol oxidase complexed with a2 steroid substrate. implications for fad dependent alcohol3 oxidases
24 | c3ca8B_ |
| not modelled | 27.2 | 23 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ydcf; PDBTitle: crystal structure of escherichia coli ydcf, an s-adenosyl-l-methionine2 utilizing enzyme
25 | c3na7A_ |
| not modelled | 26.8 | 13 | PDB header:gene regulation, chaperone Chain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
26 | c2q9uB_ |
| not modelled | 25.3 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:a-type flavoprotein; PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis
27 | d2dlda1 |
| not modelled | 25.2 | 10 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
28 | c3ikbB_ |
| not modelled | 23.7 | 15 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the structure of a conserved protein from streptococcus2 mutans ua159.
29 | c2gn0A_ |
| not modelled | 22.9 | 18 | PDB header:lyase Chain: A: PDB Molecule:threonine dehydratase catabolic; PDBTitle: crystal structure of dimeric biodegradative threonine deaminase (tdcb)2 from salmonella typhimurium at 1.7 a resolution (triclinic form with3 one complete subunit built in alternate conformation)
30 | c1e5dA_ |
| not modelled | 22.8 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase; PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas
31 | d1j4aa1 |
| not modelled | 22.6 | 7 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
32 | d2ac7a1 |
| not modelled | 21.8 | 26 | Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases
33 | d2yt9a2 |
| not modelled | 20.9 | 50 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
34 | d1ycga1 |
| not modelled | 20.6 | 20 | Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related
35 | d2f2ab2 |
| not modelled | 20.6 | 27 | Fold:Glutamine synthetase/guanido kinase Superfamily:Glutamine synthetase/guanido kinase Family:GatB/GatE catalytic domain-like
36 | d1w85a_ |
| not modelled | 19.4 | 17 | Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Branched-chain alpha-keto acid dehydrogenase PP module
37 | c1xrsB_ |
| not modelled | 19.3 | 21 | PDB header:isomerase Chain: B: PDB Molecule:d-lysine 5,6-aminomutase beta subunit; PDBTitle: crystal structure of lysine 5,6-aminomutase in complex with plp,2 cobalamin, and 5'-deoxyadenosine
38 | c3bsfB_ |
| not modelled | 19.0 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:at4g34840; PDBTitle: crystal structure of the mta/sah nucleosidase
39 | c3nm5B_ |
| not modelled | 18.7 | 9 | PDB header:hydrolase Chain: B: PDB Molecule:mta/sah nucleosidase; PDBTitle: helicobacter pylori mtan complexed with formycin a
40 | c2g5iB_ |
| not modelled | 18.1 | 27 | PDB header:ligase Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase PDBTitle: structure of trna-dependent amidotransferase gatcab2 complexed with adp-alf4
41 | c1ychD_ |
| not modelled | 17.7 | 16 | PDB header:oxidoreductase Chain: D: PDB Molecule:nitric oxide reductase; PDBTitle: x-ray crystal structures of moorella thermoacetica fpra.2 novel diiron site structure and mechanistic insights into3 a scavenging nitric oxide reductase
42 | d1jysa_ |
| not modelled | 17.6 | 26 | Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases
43 | d1xm7a_ |
| not modelled | 17.2 | 29 | Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Hypothetical protein aq 1666
44 | d1sc6a1 |
| not modelled | 17.0 | 5 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
45 | c2is8A_ |
| not modelled | 16.8 | 24 | PDB header:structural protein Chain: A: PDB Molecule:molybdopterin biosynthesis enzyme, moab; PDBTitle: crystal structure of the molybdopterin biosynthesis enzyme moab2 (ttha0341) from thermus theromophilus hb8
46 | c1geaA_ |
| not modelled | 16.7 | 60 | PDB header:neuropeptide Chain: A: PDB Molecule:pituitary adenylate cyclase activating PDBTitle: receptor-bound conformation of pacap21
47 | c3bl6A_ |
| not modelled | 16.1 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:5'-methylthioadenosine nucleosidase/s- PDBTitle: crystal structure of staphylococcus aureus 5'-2 methylthioadenosine/s-adenosylhomocysteine nucleosidase in3 complex with formycin a
48 | c2wzlA_ |
| not modelled | 15.8 | 33 | PDB header:viral protein Chain: A: PDB Molecule:phosphoprotein; PDBTitle: the structure of the n-rna binding domain of the mokola2 virus phosphoprotein
49 | d1pwha_ |
| not modelled | 15.7 | 23 | Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
50 | c3d3kD_ |
| not modelled | 15.6 | 12 | PDB header:protein binding Chain: D: PDB Molecule:enhancer of mrna-decapping protein 3; PDBTitle: crystal structure of human edc3p
51 | d2f7wa1 |
| not modelled | 15.5 | 18 | Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like
52 | c1zosE_ |
| not modelled | 15.5 | 14 | PDB header:hydrolase Chain: E: PDB Molecule:5'-methylthioadenosine / s-adenosylhomocysteine PDBTitle: structure of 5'-methylthionadenosine/s-adenosylhomocysteine2 nucleosidase from s. pneumoniae with a transition-state3 inhibitor mt-imma
53 | c3eeiA_ |
| not modelled | 15.3 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:5-methylthioadenosine nucleosidase/s- PDBTitle: crystal structure of 5'-methylthioadenosine/s-2 adenosylhomocysteine nucleosidase from neisseria3 meningitidis in complex with methylthio-immucillin-a
54 | d1wiwa_ |
| not modelled | 15.3 | 25 | Fold:SIS domain Superfamily:SIS domain Family:double-SIS domain
55 | c3pdiB_ |
| not modelled | 14.9 | 13 | PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen
56 | c3k1yE_ |
| not modelled | 14.7 | 11 | PDB header:oxidoreductase Chain: E: PDB Molecule:oxidoreductase; PDBTitle: x-ray structure of oxidoreductase from corynebacterium2 diphtheriae. orthorombic crystal form, northeast structural3 genomics consortium target cdr100d
57 | d2h1qa1 |
| not modelled | 14.4 | 15 | Fold:PLP-dependent transferase-like Superfamily:Dhaf3308-like Family:Dhaf3308-like
58 | d2bfda1 |
| not modelled | 14.4 | 11 | Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Branched-chain alpha-keto acid dehydrogenase PP module
59 | c2rmzA_ |
| not modelled | 14.0 | 19 | PDB header:cell adhesion Chain: A: PDB Molecule:integrin beta-3; PDBTitle: bicelle-embedded integrin beta3 transmembrane segment
60 | d1umda_ |
| not modelled | 14.0 | 9 | Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Branched-chain alpha-keto acid dehydrogenase PP module
61 | c3c7bA_ |
| not modelled | 13.8 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit alpha; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus
62 | c2qneA_ |
| not modelled | 13.8 | 18 | PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of putative methyltransferase (zp_00558420.1) from2 desulfitobacterium hafniense y51 at 2.30 a resolution
63 | d1th5a1 |
| not modelled | 13.8 | 14 | Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:NifU C-terminal domain-like
64 | c3npgD_ |
| not modelled | 13.7 | 12 | PDB header:unknown function Chain: D: PDB Molecule:uncharacterized duf364 family protein; PDBTitle: crystal structure of a protein with unknown function from duf3642 family (ph1506) from pyrococcus horikoshii at 2.70 a resolution
65 | d1xwdb1 |
| not modelled | 13.5 | 19 | Fold:Cystine-knot cytokines Superfamily:Cystine-knot cytokines Family:Gonadodropin/Follitropin
66 | d1fyja_ |
| not modelled | 13.4 | 71 | Fold:S15/NS1 RNA-binding domain Superfamily:S15/NS1 RNA-binding domain Family:a tRNA synthase domain
67 | c1qfwB_ |
| not modelled | 13.4 | 25 | PDB header:immune system Chain: B: PDB Molecule:gonadotrophin beta subunit; PDBTitle: ternary complex of human chorionic gonadotropin with fv anti alpha2 subunit and fv anti beta subunit
68 | c1zj8B_ |
| not modelled | 13.4 | 15 | PDB header:oxidoreductase Chain: B: PDB Molecule:probable ferredoxin-dependent nitrite reductase nira; PDBTitle: structure of mycobacterium tuberculosis nira protein
69 | d1hcnb_ |
| not modelled | 13.3 | 25 | Fold:Cystine-knot cytokines Superfamily:Cystine-knot cytokines Family:Gonadodropin/Follitropin
70 | c2ax3A_ |
| not modelled | 13.2 | 21 | PDB header:transferase Chain: A: PDB Molecule:hypothetical protein tm0922; PDBTitle: crystal structure of a putative carbohydrate kinase (tm0922) from2 thermotoga maritima msb8 at 2.25 a resolution
71 | d1nwba_ |
| not modelled | 13.1 | 17 | Fold:HesB-like domain Superfamily:HesB-like domain Family:HesB-like domain
72 | d1fmfa_ |
| not modelled | 13.0 | 15 | Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain
73 | c3edoA_ |
| not modelled | 12.9 | 12 | PDB header:flavoprotein Chain: A: PDB Molecule:putative trp repressor binding protein; PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution
74 | c1vmeB_ |
| not modelled | 12.7 | 13 | PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution
75 | d1m1na_ |
| not modelled | 12.5 | 11 | Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein
76 | d1ygya1 |
| not modelled | 12.4 | 15 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
77 | c3dp9A_ |
| not modelled | 12.4 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:mta/sah nucleosidase; PDBTitle: crystal structure of vibrio cholerae 5'-methylthioadenosine/s-adenosyl2 homocysteine nucleosidase (mtan) complexed with butylthio-dadme-3 immucillin a
78 | d1vyia_ |
| not modelled | 12.3 | 33 | Fold:Phosphoprotein M1, C-terminal domain Superfamily:Phosphoprotein M1, C-terminal domain Family:Phosphoprotein M1, C-terminal domain
79 | c3i4zA_ |
| not modelled | 12.3 | 13 | PDB header:transferase Chain: A: PDB Molecule:tryptophan dimethylallyltransferase; PDBTitle: crystal structure of the dimethylallyl tryptophan synthase fgapt2 from2 aspergillus fumigatus
80 | c3tl6B_ |
| not modelled | 12.0 | 17 | PDB header:transferase Chain: B: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: crystal structure of purine nucleoside phosphorylase from entamoeba2 histolytica
81 | c2dmlA_ |
| not modelled | 11.9 | 31 | PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a6; PDBTitle: the solution structure of the first thioredoxin domain of2 mouse protein disulfide-isomerase a6
82 | c2dbqA_ |
| not modelled | 11.9 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:glyoxylate reductase; PDBTitle: crystal structure of glyoxylate reductase (ph0597) from pyrococcus2 horikoshii ot3, complexed with nadp (i41)
83 | d2b4ya1 |
| not modelled | 11.9 | 21 | Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Sir2 family of transcriptional regulators
84 | d3cxeb1 |
| not modelled | 11.7 | 83 | Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Short-chain cytokines
85 | c2dg2D_ |
| not modelled | 11.7 | 25 | PDB header:protein binding Chain: D: PDB Molecule:apolipoprotein a-i binding protein; PDBTitle: crystal structure of mouse apolipoprotein a-i binding2 protein
86 | d2fd6u3 |
| not modelled | 11.6 | 83 | Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Extracellular domain of cell surface receptors
87 | d2i9be3 |
| not modelled | 11.6 | 83 | Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Extracellular domain of cell surface receptors
88 | d2naca1 |
| not modelled | 11.5 | 2 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
89 | c3oa1B_ |
| not modelled | 11.4 | 30 | PDB header:chaperone Chain: B: PDB Molecule:phosphoprotein; PDBTitle: crystal structure of phosphoprotein/protein p/protein m1 residues 69-2 297 from rabies virus reveals degradation to c-terminal domain only
90 | c3aerC_ |
| not modelled | 11.4 | 17 | PDB header:oxidoreductase Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark
91 | c2g76A_ |
| not modelled | 11.3 | 5 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of human 3-phosphoglycerate dehydrogenase
92 | d2db7a1 |
| not modelled | 11.3 | 35 | Fold:Orange domain-like Superfamily:Orange domain-like Family:Hairy Orange domain
93 | c1vddC_ |
| not modelled | 11.2 | 29 | PDB header:recombination Chain: C: PDB Molecule:recombination protein recr; PDBTitle: crystal structure of recombinational repair protein recr
94 | c3orsD_ |
| not modelled | 11.2 | 21 | PDB header:isomerase,biosynthetic protein Chain: D: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase; PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide mutase2 from staphylococcus aureus
95 | c2a5yA_ |
| not modelled | 11.2 | 17 | PDB header:apoptosis Chain: A: PDB Molecule:apoptosis regulator ced-9; PDBTitle: structure of a ced-4/ced-9 complex
96 | d2ax3a2 |
| not modelled | 11.1 | 21 | Fold:YjeF N-terminal domain-like Superfamily:YjeF N-terminal domain-like Family:YjeF N-terminal domain-like
97 | c3rfqC_ |
| not modelled | 11.0 | 26 | PDB header:biosynthetic protein Chain: C: PDB Molecule:pterin-4-alpha-carbinolamine dehydratase moab2; PDBTitle: crystal structure of pterin-4-alpha-carbinolamine dehydratase moab22 from mycobacterium marinum
98 | d2fug71 |
| not modelled | 11.0 | 71 | Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Nqo15-like
99 | c3pdiG_ |
| not modelled | 10.8 | 18 | PDB header:protein binding Chain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife; PDBTitle: precursor bound nifen