168 c1s3sA_ Probab=97.21   E-value=0.0039  Score=38.11  Aligned_columns=110  Identities=24%

Q ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHC
Q ss_conf             34787997899986999988999999961125447872321011000006888723883165132224674001222100
Q batch____        25 NLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVA  104 (255)
Q Consensus        25 s~~i~~Ge~~~iiG~nGsGKSTLlk~L~g~~~~~~G~I~~~g~~i~~~~~~~~~~~~i~~~~q~~~l~~~~tv~enl~~~  104 (255)
                      .+.+.+..-+.+.||.|+|||++++.++...          |.++..++........++                     
T Consensus       210 ~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~----------~~~~~~i~~~~l~~~~~g---------------------  258 (436)
T c1s3sA_         210 AIGVKPPRGILLYGPPGTGKTLIARAVANET----------GAFFFLINGPEIMSKLAG---------------------  258 (436)
T ss_dssp             HCCCCCCCEEEEECSTTSSHHHHHHHHHHHH----------TCEEEEEEHHHHHTSCTT---------------------
T ss_pred             HCCCCCCCEEEEECCCCCCHHHHHHHHHHHC----------CCCEEEEEHHHHCCCCCC---------------------
T ss_conf             4889987538986799899789999998744----------995899730687001001---------------------


Q ss_pred             CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEECC-----
Q ss_conf             112330235554310000253378999999999998382122052000027652013456767420353013113-----
Q batch____       105 QHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDE-----  179 (255)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~ia~al~~~p~ililDE-----  179 (255)
                                              +....+...                          +.+|-...|.++++||     
T Consensus       259 ------------------------~~e~~l~~~--------------------------f~~a~~~~p~ii~lDeid~l~  288 (436)
T c1s3sA_         259 ------------------------ESESNLRKA--------------------------FEEAEKNAPAIIFIDELDAIA  288 (436)
T ss_dssp             ------------------------HHHHHHHHH--------------------------HHHHHHTCSEEEEEETGGGTC
T ss_pred             ------------------------HHHHHHHHH--------------------------HHHHHHCCCCEEEEHHHHHHH
T ss_conf             ------------------------588889999--------------------------999975099489840000321


Q ss_pred             -----CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf             -----444899899999999999999857988999928989
Q batch____       180 -----PAAGLNPKETKELDELIAELRNHHNTTILLIEHDMK  215 (255)
Q Consensus       180 -----Pt~gLD~~~~~~i~~~l~~l~~~~g~tvi~ish~~~  215 (255)
                           ..+..+......+...+.......+..||.+|.+.+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vi~tt~~~~  329 (436)
T c1s3sA_         289 PKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPN  329 (436)
T ss_dssp             CCSSSCCCTTHHHHHHHHHHHHHHCCGGGCEEEEEEESCGG
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHH
T ss_conf             02578874588999999986430222469879998448958