BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (582 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P32152 Putative phosphotransferase EIIA component n=54 ... 1189 0.0 UniRef50_C7TGG8 Transcription regulator n=4 Tax=Lactobacillus Re... 121 7e-26 UniRef50_C2FPV9 Frv operon regulatory protein n=3 Tax=Lactobacil... 96 3e-18 UniRef50_A9MI81 Putative uncharacterized protein n=1 Tax=Salmone... 75 1e-11 UniRef50_O31644 Putative phosphotransferase enzyme IIA component... 53 4e-05 UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdema... 52 9e-05 UniRef50_Q724A6 PRD/PTS system IIA 2 domain protein n=29 Tax=Lis... 51 2e-04 UniRef50_B9Y3S8 Putative uncharacterized protein n=1 Tax=Holdema... 50 2e-04 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 49 4e-04 UniRef50_C0X124 PRD/PTS system IIA 2 domain protein n=3 Tax=Ente... 48 0.001 UniRef50_C0D9V6 Putative uncharacterized protein n=1 Tax=Clostri... 47 0.002 UniRef50_C7IBL1 Transcriptional antiterminator, BglG n=1 Tax=Clo... 47 0.002 UniRef50_Q67QV8 Transcription antiterminator BglG family n=1 Tax... 45 0.006 UniRef50_B0M974 Putative uncharacterized protein n=1 Tax=Anaeros... 44 0.019 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 44 0.021 UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostri... 43 0.038 UniRef50_C2BXP0 Transcription antiterminator n=1 Tax=Listeria gr... 42 0.082 UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR fa... 42 0.085 >UniRef50_P32152 Putative phosphotransferase EIIA component n=54 Tax=Enterobacteriaceae RepID=FRVR_ECOLI Length = 582 Score = 1189 bits (3075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 582/582 (100%), Positives = 582/582 (100%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ Sbjct: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 Query: 61 LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE 120 LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE Sbjct: 61 LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE 120 Query: 121 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW 180 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW Sbjct: 121 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW 180 Query: 181 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ Sbjct: 181 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN Sbjct: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI 360 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI Sbjct: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI 360 Query: 361 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII Sbjct: 361 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 Query: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA Sbjct: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 Query: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA Sbjct: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 Query: 541 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG 582 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG Sbjct: 541 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG 582 >UniRef50_C7TGG8 Transcription regulator n=4 Tax=Lactobacillus RepID=C7TGG8_LACRL Length = 569 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 145/598 (24%), Positives = 252/598 (42%), Gaps = 47/598 (7%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 ML R++K++ L QQ + GELA+Q S RTI+RDI +N L + Y Sbjct: 1 MLLLREIKVLRRLSQQDFSGGELAKQLKASRRTIVRDIAAINTELQSSGIGMITTQNKYH 60 Query: 61 LEIFERRSFFQLLQ-KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRY 119 L I LL D + +L L ++ P A L + L T + + + L Y Sbjct: 61 LTILNPGRLMALLDTSRDEANEILLRLCISETIPMADLIAETYLSRTQIMDYISELNADY 120 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHR 179 ++SRPG+G I R+ + A+ + + P L+ D L L+ Sbjct: 121 ADIFRISSRPGMGMTIKMKRLTRIDIAADCIFEYPQLLDKVAPGTDRLPQLT-------- 172 Query: 180 WPLMQGDYLSSLILAIYAL------RNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRT- 232 DYLS I R Q+ + P S DN V+T Sbjct: 173 ------DYLSENICPYQTWVIDSQWRAQVLAAFICSPSSGTLTAARQSNQI--DNFVKTR 224 Query: 233 ---LTGLIEKQHQQAQVIS--ADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAP 287 L GL + + + Q+ S AD+ Q L I E++ H +R A P Sbjct: 225 EALLMGLGKSRDKIVQMFSEIADDFQ-----------LEAIGQSTFESLFTHFVRECAFP 273 Query: 288 VWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF-DSDLIGLYFACALERHQN 346 ++ + L A P AFD + H + L ++ ++ DSD + LY A+ + + Sbjct: 274 RPLSVLSDYDIAKLSAQNPVAFDYA-HVVALDLFKISHQVWLDSDFLALYIVQAVNQREA 332 Query: 347 ERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIE-PLLIINNSHYL 405 + I+ L+ + ++A IN I++ + N + + RSL E I ++ L I N H + Sbjct: 333 KPVRILFLAPRMSLAQINATIIQQKLHNISLHMVRSLKEAETIFDQRHFDLAIANVRHDV 392 Query: 406 LDDAVNNYI-TVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHI 464 ++ A +++ T ++T I ++ + + R+ AP F + G+ + + Sbjct: 393 VEHASISFVLTFSAVVTDQDIAALEQLVNGQYYRENIAAML-APNHF-VGQITGDKFLTV 450 Query: 465 TRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP 524 ++ V + +A +II RE G L++N ++IPH + +R F I + Sbjct: 451 LQKGLQNFVRNDLLDRADAVKIIEREQAGNQLVLNHISIPHIVTNSVTDYRLFAIKPKEV 510 Query: 525 VEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG 582 + ++++ I ++I + IFSYL L ++ I + Y+ ++LL KG Sbjct: 511 ITIDDQPIYLLVIVLVGTSQAEKNTIFSYLYQTLRRYVPADIEDVQDYQQVIKLL-KG 567 >UniRef50_C2FPV9 Frv operon regulatory protein n=3 Tax=Lactobacillus plantarum RepID=C2FPV9_LACPL Length = 582 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 126/606 (20%), Positives = 251/606 (41%), Gaps = 52/606 (8%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 MLN R+L+I+ LL++ + +LA S RT++RDI +N L ++ Y Sbjct: 1 MLNSRELRIILLLQEHDLSGEDLAALLETSRRTVVRDIARINGLLRSESIGSIESVKKYH 60 Query: 61 LEIFERRSFFQLLQKHDNDDRL------------LALLLLNTFTPRAQLASALNLPETWV 108 L + R + +LL + +++ L + L+ TF R + + + Sbjct: 61 LLVLNRANLNRLLTQSNHESVLVLLNLLVSPNITMGELIERTFMSRQSIMNCI------- 113 Query: 109 AERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLI----PLAGITR 164 ++ ++Y + + RP +G + ++ +LA L+ D L+ L + Sbjct: 114 ----EKINRQYAKILKIRLRPRIGISVSVNHISKIDILAALISDDHQLVEKRFKLINQSE 169 Query: 165 DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQL-TDEWPQYPGDEIKQIVEHSGL 223 D L + Q P DYL+ L+ + L + + + +++ SG+ Sbjct: 170 D-LARIRMIVKQQ--IPEKMFDYLTDSQLSAQIMACTLISKDNTVIMKSTLYKVLLKSGV 226 Query: 224 FLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRC 283 +A TL + + Q ++ VQ ++ +L + V I HL R Sbjct: 227 PHLQSA--TLAVFFDAKKQLLNHMTIRQVQLAVRATRSRYTLAAFNHSFVNEIFKHLCRS 284 Query: 284 LAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALER 343 P ++ LK P AFD + L++ + D + I LY A+E Sbjct: 285 AMFPTIAPASLSEQISYLKVQNPFAFDFAFDLSKKLQQCFESVQIDDEYIALYVLHAIES 344 Query: 344 HQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSH 403 ++ + Q ++A IN++ I + + N + E+V +E++E L N + Sbjct: 345 PTARNVRTLMYATQQSVANINKMIITQKISNIDI-------EMVFSKEQLESRLNYINYN 397 Query: 404 YLLDDAV---------NNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS-FHY 453 ++ + V N T +I+ +E +K + ++I++ F P S F++ Sbjct: 398 LVIGNGVHPNDLQLPINFDSTFNGVISLDELEHLKSLSSESYIQKNLSSFL--PKSHFYH 455 Query: 454 SNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERR 513 + + + + Q +T D+++ ++ARE G L++N +++PH +E Sbjct: 456 APTKYINVNQTLKAGLTNFAEQGLLTNDQSKALLAREAAGNQLVLNHVSLPHASTELSDA 515 Query: 514 FRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYE 573 ++ F IT ++++ I +LI A ++FSYL + L Q + + YE Sbjct: 516 YKVFAITFDGIMKIDGNPIYLILIVLANEKRADSGQVFSYLYTRLKQLSNVQLQNVDTYE 575 Query: 574 AFMELL 579 ++ L Sbjct: 576 TLIKYL 581 >UniRef50_A9MI81 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MI81_SALAR Length = 82 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/51 (72%), Positives = 45/51 (88%) Query: 353 LLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSH 403 +LSDQNAIATINQ AIERDVL+CRV+IAR+ E+ AI +EI+P+LIINNS Sbjct: 1 MLSDQNAIATINQQAIERDVLHCRVMIARTPGEVNAISQEIDPVLIINNSQ 51 >UniRef50_O31644 Putative phosphotransferase enzyme IIA component n=19 Tax=Bacillaceae RepID=MANR_BACSU Length = 648 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 81/351 (23%), Positives = 147/351 (41%), Gaps = 36/351 (10%) Query: 252 VQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 V L+ RV + ++ D L+ + HL L + +N++K +P F Sbjct: 306 VGHLINRVSELKMMDFHKDQDLINGLNIHLNTVLQRLSYDLSVANPMLNDIKKMYPYLFH 365 Query: 311 MSLHFITLLREQLD--IPLFDSDLIGLYFACALERHQ----NERQPIILLSDQNAIATIN 364 + + + + + D IP ++ + L+F A+ER Q ++ +I+ ++ + Sbjct: 366 LIIDVLEDINQTFDLHIPEEEAAYLTLHFQAAIERMQGSSETHKKAVIVCHMGIGMSQLL 425 Query: 365 QLAIERD-----VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNI 419 + IER V+ C I L + + E+I+ L+I+ A+ N ITV +I Sbjct: 426 RTKIERKYHQIAVMAC--IAKADLKDYIKKHEDID--LVISTI------ALEN-ITVPHI 474 Query: 420 ITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSN----------VRGESWQHITRQIC 469 + + +E + +AFIRQ E +F N E + Q+ Sbjct: 475 VVSPLLEPGEEKKLSAFIRQLGESHRQKQKTFQMLNNTTPFLVFLQQEAEHRYKLIEQLA 534 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 L + ++ D A + RE I + +AIPH ++ ++ TL +P+E N Sbjct: 535 TALFEKGYVDKDYAVHAVMREKMSATNIGSGIAIPHANAKFIKQSAIAIATLKEPLEWGN 594 Query: 530 EVINHV-LIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 E ++ V ++A D ++FS L S L + PA + LT M L Sbjct: 595 EKVSLVFMLAVKHEDQTMTKQLFSEL-SYLSEQPA-FVQKLTKETNVMTFL 643 >UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Q3_9FIRM Length = 655 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 62/317 (19%), Positives = 135/317 (42%), Gaps = 32/317 (10%) Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 V+ ++ V + ++++ D LV + H+ L + H N +K + F Sbjct: 315 VRKIISVVSNVLNVDLTHDEALVHGLLIHMRPTLFRLRYERGHTNGLTNYIKTEYKKTFR 374 Query: 311 MSLHFITLLREQLDIPLFDSDL--IGLYFACALERHQNERQPIILLSDQNAIATINQLAI 368 ++ L E D+ + + +L I LY ALER++N P+ + + INQ+ Sbjct: 375 VAWLISVLFEEYFDLKVSEDELGYIVLYIQSALERNEN---PVRTMLVSASGMGINQMLC 431 Query: 369 ERDVLNCRVIIARSLSELVAIR---------EEIEPL-LIINNSHYLLDDAVNNYITVKN 418 ++ I RS S + +++ E++E + LI+ L D + + + Sbjct: 432 DK--------ICRSFSLIHSVKVVSVHDFKIEKVEDVDLILTTRELGLHDP--RIVEIDD 481 Query: 419 IITAAGIEQIKHFLATAFIRQQPERFFSAPG------SFHYSNVRGESWQHITRQICAQL 472 ++ A I++I H++ + + E F A ++++ + + + +C +L Sbjct: 482 FLSDASIQKINHWIRNTILNKVSEAQFDADCHQLFEPDLIFTHLEIDDKPALLKFLCDRL 541 Query: 473 VAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI 532 V + ++T + ++ RE I N +AIPH + R TL +P+ ++E + Sbjct: 542 VRKGYVTRKYVKTVLDREAFTPTSIGNGVAIPHGDQNEINEARVVIATLEKPILWDSEQV 601 Query: 533 NHVLIACAAADARHELK 549 + + + E++ Sbjct: 602 DVIFLLVVKMTNDFEIR 618 >UniRef50_Q724A6 PRD/PTS system IIA 2 domain protein n=29 Tax=Listeria RepID=Q724A6_LISMF Length = 623 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 72/331 (21%), Positives = 146/331 (44%), Gaps = 31/331 (9%) Query: 268 IDAQLVENITGHLLRCLAAPVWIAEHRQSSMN----NLKAAWPAAFDMSLHFITLLREQL 323 ID E I +L+ ++A A H+Q N LK +P +++S++ ++++L Sbjct: 296 IDFSADEKIATYLVAHISALYKRANHKQYLTNPLTEELKNKFPFIYNVSVYASAFIQKEL 355 Query: 324 DIPLFDSDL--IGLYFACALER-HQNERQPIILLSDQNAIATI---NQLAIERDVLNCRV 377 I D ++ I L+F A E + +++ I+L+S A + NQL D + + Sbjct: 356 AITFPDDEIAYIALHFLSASETINHGKKRKILLVSPYGAGSQRLIHNQLKKIAD-FSIDL 414 Query: 378 IIARSLSEL--VAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 ++++S+ ++ + +EI ++ + D V +Y ++T +++IKH L T Sbjct: 415 LVSQSIFDIKQFTLDKEIHLIITAEPLNLTTDIPVYHYDL---LLTETDLQKIKHILET- 470 Query: 436 FIRQQPE------RFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 +P+ +FF F N + S + + +C QL A + +D ++ R Sbjct: 471 ----KPKADSISRKFFKKELFFPKQNFK--SKEEVITFLCEQLTAFDYCDSDYVSKVFER 524 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL- 548 E N AIPH ++ L +P++ + VL+ + + Sbjct: 525 EQLSSTCYGNYYAIPHAIQRSAKKNAVAVCALDKPIDWGGNRVKLVLLLTMKEERDNSFE 584 Query: 549 KIFSYLASILCQHP-AEIIAGLTGYEAFMEL 578 ++F L +IL + + +A ++ F+EL Sbjct: 585 ELFGQLVTILNERSFVKKLAKQEDFQQFIEL 615 >UniRef50_B9Y3S8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3S8_9FIRM Length = 631 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 21/178 (11%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 MLNE+ +++ LL++ P T G LAQQ +S RT R I L L S G Sbjct: 1 MLNEKMFQLIQLLKRGHSPLTSGMLAQQLKLSARTCKRYIAELIPLLEQHGARILSDKTG 60 Query: 59 YQLEIFERRSFFQLLQKH-------DNDDRL----LALLLLNTFTPRAQLASALNLPETW 107 Y+LEI + F LQ+ +N+ L L LL+N ++++ L + + Sbjct: 61 YRLEIIDAARFEAFLQEKTKVFEFSENNGELQFGILKSLLVNPTISQSEMIDQLFISRST 120 Query: 108 VAERLPRLKQRY-ERTCCLASRPGLGHFI--DETE-----EKRVILLANLLRKDPFLI 157 + + + +K+ E LA+RP G++I DE + K + + A+ L +P L+ Sbjct: 121 LNKLMVEVKKTLKENGILLANRPYYGYYIVGDEVDIRNFMVKTLFVTASFLSAEPELL 178 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 91/409 (22%), Positives = 170/409 (41%), Gaps = 69/409 (16%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSA 57 ML+ RQ +++ L Q Q T E+A+ GV+ RTI D+ L TL A + A Sbjct: 1 MLSLRQEELLKRLMQVEQELTSEEIARMIGVTSRTIRTDMKALKSTLAEHGAVLHIKRGA 60 Query: 58 GYQLEIFERRSFFQLLQK--------------HDNDDR----LLALLLLNTFTPRAQLAS 99 GY L + + SF L+K + +DR L LLL + LA Sbjct: 61 GYTLTVEDYGSFRTFLKKSLGERNEKKEQIIPNQPEDRVAYLLKRLLLSEDYIKLDALAE 120 Query: 100 ALNLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEK-RVILLANLLRK---DP 154 L + E+ V L ++ + ++ RP G + E K R + ++ +K + Sbjct: 121 ELFVSESTVKNDLKAVRHLFSLHGLSVSHRPKYGLRLTGEEMKLRYCMAEHVFQKAHANS 180 Query: 155 FLIP------LAGITRDNLQ----------------HLSTACD--NQHRWPLMQGDYLSS 190 L+P + GI R + H++ AC + + +M L Sbjct: 181 TLLPEETYQFIQGIVRSRTKASGLYLSEIGLSNLVTHIAIACKRIEEKKIVMMPETELKE 240 Query: 191 L-ILAIYALRNQLTDEWP-----QYPGDEIKQIVEH---SGLFLGDNAVRTLTGLIEKQH 241 + + ++ + Q+ ++ ++P E+ I H + + +A TL L+E+ H Sbjct: 241 IQVQPVFQVAQQMAEDIRHVLGIEFPLSEMAYIAIHLMGAKMMAYGDAGHTLFHLLEEDH 300 Query: 242 QQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 + + LL V SLNI D +L+ ++ HL + + R + + Sbjct: 301 FRF-------IHQLLAYVEEHMSLNIQFDKELIVGLSLHLRSAIHRFRYGMNIRNPYLTD 353 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDL--IGLYFACALERHQNE 347 +K +P AF+ ++ L+E+ I + + ++ + L+ A+ER +++ Sbjct: 354 IKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEIGYLALHIGAAIERTKSQ 402 >UniRef50_C0X124 PRD/PTS system IIA 2 domain protein n=3 Tax=Enterococcus faecalis RepID=C0X124_ENTFA Length = 634 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 76/362 (20%), Positives = 146/362 (40%), Gaps = 47/362 (12%) Query: 209 YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGL---LQRVPGIASL 265 + +E+ Q+ S LF+G T+ ++ Q Q+++ ++ L LQ+V I + Sbjct: 250 FSKEELAQL---SLLFVGIQKEHTVNS---EKTQLQQIVNPKIIEVLEEVLQKVEQIYFI 303 Query: 266 NIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 + + + + HL A R S + +LK +P +D+S++ + ++E+L+I Sbjct: 304 QLKNKEFFNKLAIHLQGLYDRSNVEAFTRNSRLWDLKTGYPLIYDISVYISSFIQERLNI 363 Query: 326 PLFDSDL--IGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSL 383 + ++ I L+ LE + E+QP +LL L +E D N R ++ + L Sbjct: 364 WFTEDEISFIALHLGSFLESQRTEQQPFLLL-----------LVVE-DYHNMREVLQKKL 411 Query: 384 SELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA-AGIEQIKHFLATAFIRQQPE 442 E + I+ + N D V T + + T G I F+ T +R+ Sbjct: 412 QEHFGNQINIKVVRQTNIDQKKFDLLVT---TNRRLATKYEGAIFIHPFITTKELRKIEN 468 Query: 443 RFFSAPGSFHYSNVRGESWQHITR-------------------QICAQLVAQHHITADEA 483 R + G + + Q I + Q+ ++ Q + ++D Sbjct: 469 RMYLLKGQKRKRQMEIRTDQFIAKELYFSQIDPADLTPEMLLDQMIQRMRIQKYCSSDFK 528 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVE-VNNEVINHVLIACAAA 542 + + RE + +A+PH + +TL +P+ N EV L+A Sbjct: 529 KSVKKREQLSPTSFPSGIAVPHAIDRTAEKSGISIMTLQEPIRWANYEVKLVALVAIRQE 588 Query: 543 DA 544 DA Sbjct: 589 DA 590 >UniRef50_C0D9V6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9V6_9CLOT Length = 642 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 22/296 (7%) Query: 298 MNNLKAAWPAAFDMSLHFITLLREQLDIPLFD--SDLIGLYFACALERHQNERQ--PIIL 353 ++ +K +P F+M ++ L+E+L + + D S I L+ A ER R+ +++ Sbjct: 349 LDEIKRKYPLVFEMGIYVGEFLKEKLGLSISDVESGFIALHLGAASERLNAARRYRAVMI 408 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSELVA-IREEIEPLLIINN---SHYLLDDA 409 L + + + + I D+ R+ + R+ S I E++P LI+ H L + Sbjct: 409 LPHNQSFSAMCEKKIS-DMFRERMEVVRTFSYFEEEIVREMDPDLILCTFPIEHRLDVET 467 Query: 410 VNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSF-----HYSNVRGESWQHI 464 VN + V + + ++ + F + F S G+ +Y ++ + + Sbjct: 468 VNINLFVDSQTESNILQAVNRLDQKRFKLE----FASHIGNLVRKEHYYQDLDLNTPGQV 523 Query: 465 TRQICAQLVAQHHITADEAQRII-AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQ 523 +CA L Q I E + I+ RE VN AIPH + + L Sbjct: 524 IDLLCADL-EQAGIVEPEFKEIVRKREEMSPTSFVNAFAIPHAFGAFAKNSTIAVAQLKN 582 Query: 524 PVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEI--IAGLTGYEAFME 577 PV+ + V++ R +KIF S + P E+ I YE F++ Sbjct: 583 PVKWGGFEVRLVMLFAINEGDRRMIKIFFDWVSNVVNQPQELAKICSSCSYEEFID 638 >UniRef50_C7IBL1 Transcriptional antiterminator, BglG n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IBL1_9CLOT Length = 514 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 22/145 (15%) Query: 19 TPGELAQQTGVSGRTILRDIDYLNFTLNG-KARIFASGSAGYQLEIFERRSFFQLLQKHD 77 T EL+ + G+S RT+ DI +N L + I A GY L+I RR F +L+ + D Sbjct: 20 TGNELSGKLGISERTVRNDISEINHMLEPYRIYIKAIHGKGYFLKIGNRRVFLELIAEKD 79 Query: 78 N----DDRLLALLLL----NTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRP 129 N +DR+ LLL N +L + + +T + L +K+R + SRP Sbjct: 80 NLLTKEDRIKTLLLKLIKGNECMDLRELEDEMYISKTTLENDLKIIKKR-----IMESRP 134 Query: 130 GL-----GHFI---DETEEKRVILL 146 L G+++ D+ +KR IL+ Sbjct: 135 YLELVRNGYYVRLADDEIKKRSILI 159 >UniRef50_Q67QV8 Transcription antiterminator BglG family n=1 Tax=Symbiobacterium thermophilum RepID=Q67QV8_SYMTH Length = 642 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 73/353 (20%), Positives = 139/353 (39%), Gaps = 44/353 (12%) Query: 256 LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 L+R+ L D V T H+ + + + + + K +P +DM++ Sbjct: 298 LRRLEDTFYLEPFDDDFVIQFTIHIRNLIQRALTGSHVKNPLVGKFKTTYPLIYDMAVLV 357 Query: 316 ITLLREQLDIPLFDSDLIGLYF--ACALERHQNER----------------QPII----- 352 LRE I + D +++ + F LE+++ +R +P++ Sbjct: 358 ANQLREIEGIHVPDDEIVFIAFHIGAYLEQNKADRGRINTLFVYADYHNMHEPVLTKIQQ 417 Query: 353 -LLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVN 411 L D N +A + +C++II+ ++ E V +E L ++ VN Sbjct: 418 ALDQDLNIVAAVPVREFAFAPYDCQLIIS-TVPETV-----VEGLPVV---------YVN 462 Query: 412 NYITVKNI-ITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICA 470 + T ++ + IE+I+ + A +R +R F+ P F NV E + R + Sbjct: 463 VFPTEADLKVIRRKIEEIRLDMRAASVRDHIQR-FAVPALFR-RNVYAEDEFAMIRILTQ 520 Query: 471 QLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE 530 + Q ++ RE N++AIPH R + +P+ N Sbjct: 521 ECAHLGLCPPSFEQEVLDREAMSSTAFPNQVAIPHSLQHSATRSFLSIVVNERPMRWGNF 580 Query: 531 VINHVLIACAAADARHELK-IFSYLASILCQHPA-EIIAGLTGYEAFMELLHK 581 + +++ D R+ + FS L S+LC A + YEAF++ L + Sbjct: 581 DVRIIILIGVCKDDRNTFQEFFSDLVSVLCNEIATRQLIQCDSYEAFLQTLTR 633 >UniRef50_B0M974 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M974_9FIRM Length = 652 Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 115/279 (41%), Gaps = 36/279 (12%) Query: 252 VQGLLQRVPGIASLNIIDAQ-----LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 V LL + L++ D Q LV +I L R P E + LK +P Sbjct: 306 VNELLNDIKNKFHLDLTDDQELKAGLVTHIRYTLKRIRMEP----ESTNPVLMLLKTEYP 361 Query: 307 AAFDMSLHFITLLREQLDIPLFDSDL--IGLYFACALERHQNERQP----IILLSDQNA- 359 FDMSL + + L +++L + Y A+ER + ++ P I +++ N Sbjct: 362 FVFDMSLFLYERFYDVFGVRLNENELGYVATYLGSAVERMERKKSPKDFTIAVVTGMNYG 421 Query: 360 ---IATINQLAIERDVLNCRVIIARSLSELVAIREEIEP-LLIINNSHYLLDDAVNNYIT 415 + T AI D+ C + S+ + I E+++P LI S +L + I Sbjct: 422 TSRLLTTRLKAIYGDI--CNIEGPFSIYAVNEI-EKLKPTFLITTESKQVLKNFQVPKIQ 478 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFF-----SAPGSFH----YSNVRGESWQHITR 466 + ++ +I +L ++ + E + S FH + N++ E+ + + R Sbjct: 479 ISPLLNEKDQREINKWL----LQMRKELMYDQLPRSIKDYFHRELFFYNLKAETPEKVIR 534 Query: 467 QICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPH 505 + L+ D A++ + RE + N++A+PH Sbjct: 535 TMSEHLIRLDFAGEDFAEKTLMREQVASTIFGNKIAMPH 573 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 37/273 (13%) Query: 269 DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL--DIP 326 D L + + HL+ + + R + ++K +P F+ S +LR++L DIP Sbjct: 332 DEFLEDGLKSHLVPAVYRLEMGLDIRNPLLEDIKTKYPLLFEKSNRVCDVLRKKLNMDIP 391 Query: 327 LFDSDLIGLYFACALERHQNERQPI-ILLSDQNAIAT----INQLAIERDVLNCRVIIAR 381 + I ++F ALER + + I++ + I T +++L + + V + Sbjct: 392 EDEVGYIAMHFGAALERKKEAAKKYNIMVVCASGIGTSRMLMSKLQMFPQINIVDVTSSI 451 Query: 382 SLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQ-- 439 L +L R++I+ ++ S LD + V ++ +E++K L T FI + Sbjct: 452 KLKDLKG-RDDIDLIV----STIPLDIKDKKVVVVNPLLLKEDVEKLKKALNTDFIMEYG 506 Query: 440 ------------------QPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 +R S Y V GE I I L+ ++ I+ + Sbjct: 507 IKKEEEENYEKEAFHIANYGKRILELCDSITYMTVTGEKSTQIIEYILKNLIDKNLISEN 566 Query: 482 E----AQRIIAREGEGENLIVNR-LAIPHCWSE 509 + +R++ RE G+ ++ N+ I HC E Sbjct: 567 QKEQIKERLLKRESLGKIVLPNKGFVIYHCTIE 599 >UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P4U6_9CLOT Length = 640 Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 12/153 (7%) Query: 1 MLNERQLKIVDLLEQQPR--TPGELAQQTGVSGRTILRDIDYLNF-TLNGKARIFASGSA 57 ML RQ++++ LE++ T ELA++ +S RTI D+D + + T + +I + Sbjct: 1 MLTTRQIELLKYLEKREEYTTTKELAEEFSISSRTIRNDLDAIEYSTKDLPIKIERTPRL 60 Query: 58 GYQLEIFERRSFFQLLQKHD-----NDDRLLA---LLLLNTFTPRAQLASALNLPETWVA 109 G +LE E+ +L +D D+R + +L+L T QLA + + + + Sbjct: 61 GIRLEFLEKVGLDSILYTNDMKEYSRDERAVVIAMMLILTDKTTIEQLADQMEVSKNTLV 120 Query: 110 ERLPRLKQRYERT-CCLASRPGLGHFIDETEEK 141 E L ++ +E L + G I EEK Sbjct: 121 EDLNSVEALFEYYGITLERKSYYGLTISGDEEK 153 >UniRef50_C2BXP0 Transcription antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BXP0_LISGR Length = 637 Score = 41.6 bits (96), Expect = 0.082, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 41/256 (16%) Query: 294 RQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD---LIGLYFACALERHQN--ER 348 R SS+ +LK A+P +D+S++ +L++E+L I F+ D I L+ L +N E+ Sbjct: 335 RNSSLLDLKTAYPLIYDISVYISSLIQEKLAI-WFNEDEISFIALHIGSFLGTQKNSIEQ 393 Query: 349 QPIILLS-------------------DQNAIATINQLAIERDVLNCRVIIARSLSELVAI 389 ++L++ +Q I T N+ AI+ + + S++E Sbjct: 394 ASLLLVANDYHDLSENIVAKLENTFGEQIFIKTANEAAIKAQSYDMLLTTDHSIAERYER 453 Query: 390 REEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPG 449 I+PLL N+ + I QIK + Q ++F A Sbjct: 454 AIFIQPLLHQNDLRKI----------------EKRIYQIKEQKQKVKMHQYIDQFIPAEL 497 Query: 450 SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSE 509 F+ ++ + + I +QI +L+ ++ D Q + RE + +AIPH Sbjct: 498 YFNQVDLAAATPKAIRKQINQRLLHNGYVGEDFLQSVEKRESMSSTGFPSGIAIPHAIEI 557 Query: 510 QERRFRGFFITLAQPV 525 + +TL +PV Sbjct: 558 SAVKSSVAVMTLQEPV 573 >UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK9_BACCO Length = 620 Score = 41.6 bits (96), Expect = 0.085, Method: Compositional matrix adjust. Identities = 125/603 (20%), Positives = 245/603 (40%), Gaps = 118/603 (19%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTI---LRDIDYLNFTLNGKARIFASG 55 M++ RQ +I+ LL++ P + ++ G+S RT+ +R I + L K ++ Sbjct: 1 MVSNRQKQILWLLQKSAGPLNAKAIGERLGISDRTVREEIRQIQQKSDALGVKLKVLRG- 59 Query: 56 SAGYQLEIFERRSFFQLLQKH---DNDDR----LLALLLLNTFTPRAQLASALNLPETWV 108 GY LE + R QL + + ++R L LLL + L + L + ++ + Sbjct: 60 -KGYLLEKVDYRRLLQLEENGLFAEQEERVKYILKRLLLEKDYVRLEDLEADLYVSKSTL 118 Query: 109 AERLPRLKQ---RYERTCCLASRPGLGHFIDETEEKRVILLAN----------------- 148 L ++++ +Y+ T LA+RP G ++ E K+ + LA+ Sbjct: 119 HTDLKKVRKILKKYDLT--LANRPHYGTKVEGGEFKKRLCLADSIFGWQNKPGQQNTPFN 176 Query: 149 --LLRK---------DPFLIPLAGITRDNL-QHLSTAC----DNQHRWPL---MQGDYLS 189 L +K + I + I NL H++ AC D PL + Y Sbjct: 177 QDLFQKVKQILIRIISKYRIRFSDIELQNLATHITLACKRIEDGFTIEPLPFHFKESYTF 236 Query: 190 SLILAIYALRNQLTDEWPQ-----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQA 244 +A ++T E + +P EI I+ H LG T LI K H Sbjct: 237 ERKVA-----KEITGEVEKSVGIPFPPAEIDYILVH---LLG-------TKLISK-HVAR 280 Query: 245 QVISA--DNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 QV D V +L + + D + +T HL L + R +N + Sbjct: 281 QVSDEIDDIVNAILHELKTQFRWDFSNDKEFRNGLTLHLHTSLNRMKYKMHIRNPLLNEM 340 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPLFDSDL--IGLYFACALERHQNERQPIILLSDQNA 359 K +P AF+ ++ + + + + ++ + ++ A ALER + +++ +++ + Sbjct: 341 KTKFPIAFEGAVAAGECIEAVIHKKVNEDEISYLAIHIAIALERMRKKKRVLVVCATGLG 400 Query: 360 IATI------NQLAIERDVLNCRVIIARSLSEL---------VAIREEIE-PLLIINNSH 403 A I N+ A E ++++ S +L + I + +E P++++ SH Sbjct: 401 SAKILSYQLENRFANEMEIVDTISYYTLSDYDLSRVDLIVSTIMIPDHLEVPVVVV--SH 458 Query: 404 YLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQH 463 +L + N+ I ++ I ++ +++ + F + + +S + Sbjct: 459 FLEE---NDAIHIQREI--------------GRLKGNVQKYMAPSKIFIHQEL--DSKEK 499 Query: 464 ITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQ 523 + + +C +LV QH + + A ++ RE N +A+PH R TLA+ Sbjct: 500 VIQFLCKKLVEQHAVPENYATLVLKREAIASTAFGNLVAVPHPLEPVTHRTFWTICTLAR 559 Query: 524 PVE 526 P++ Sbjct: 560 PIQ 562 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P32152 Putative phosphotransferase EIIA component n=54 ... 676 0.0 UniRef50_C7TGG8 Transcription regulator n=4 Tax=Lactobacillus Re... 501 e-140 UniRef50_C2FPV9 Frv operon regulatory protein n=3 Tax=Lactobacil... 480 e-134 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 365 3e-99 UniRef50_Q724A6 PRD/PTS system IIA 2 domain protein n=29 Tax=Lis... 272 3e-71 UniRef50_C0X124 PRD/PTS system IIA 2 domain protein n=3 Tax=Ente... 270 1e-70 UniRef50_O31644 Putative phosphotransferase enzyme IIA component... 269 2e-70 UniRef50_C0D9V6 Putative uncharacterized protein n=1 Tax=Clostri... 266 2e-69 UniRef50_B9Y3S8 Putative uncharacterized protein n=1 Tax=Holdema... 264 6e-69 UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdema... 249 2e-64 Sequences not found previously or not previously below threshold: UniRef50_A8RTN9 Putative uncharacterized protein n=1 Tax=Clostri... 228 4e-58 UniRef50_C5EV18 Transcription antiterminator BglG family n=1 Tax... 227 8e-58 UniRef50_P46321 Putative phosphotransferase enzyme IIA component... 226 2e-57 UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 213 2e-53 UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan opero... 205 3e-51 UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR fa... 199 2e-49 UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR fa... 197 1e-48 UniRef50_UPI000196A9D7 hypothetical protein CATMIT_00535 n=1 Tax... 189 2e-46 UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostri... 186 2e-45 UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 T... 186 2e-45 UniRef50_A0AFK2 Complete genome n=18 Tax=Listeria RepID=A0AFK2_L... 185 6e-45 UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B... 183 2e-44 UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan opero... 183 2e-44 UniRef50_C2BXP0 Transcription antiterminator n=1 Tax=Listeria gr... 181 5e-44 UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=The... 180 2e-43 UniRef50_C0CTD3 Putative uncharacterized protein n=1 Tax=Clostri... 178 6e-43 UniRef50_C6CCS2 PTS modulated transcriptional regulator, MtlR fa... 177 1e-42 UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostri... 176 2e-42 UniRef50_C9XML5 Transcriptional antiterminator n=4 Tax=Clostridi... 176 2e-42 UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 ... 175 4e-42 UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibaci... 175 6e-42 UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) ... 170 1e-40 UniRef50_C3RJ67 Transcription antiterminator bglG n=3 Tax=Bacter... 168 5e-40 UniRef50_B6FYB2 Putative uncharacterized protein n=1 Tax=Clostri... 167 9e-40 UniRef50_Q67QV8 Transcription antiterminator BglG family n=1 Tax... 167 9e-40 UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_L... 167 1e-39 UniRef50_A0KQ06 Transcription antiterminator, BglG family n=1 Ta... 165 3e-39 UniRef50_C9A391 Transcriptional antiterminator n=1 Tax=Enterococ... 165 4e-39 UniRef50_B7CCL3 Putative uncharacterized protein n=1 Tax=Eubacte... 165 4e-39 UniRef50_A8AYR4 Transcription antiterminator BglG family n=1 Tax... 165 5e-39 UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR fa... 163 1e-38 UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=... 163 1e-38 UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR fa... 163 2e-38 UniRef50_Q721P5 PRD/PTS system IIA 2 domain protein n=15 Tax=Lis... 162 3e-38 UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collins... 160 1e-37 UniRef50_D1P1R2 Transcription antiterminator, BglG family n=5 Ta... 160 2e-37 UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacteriu... 159 2e-37 UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotr... 158 6e-37 UniRef50_A5CU91 Putative transcription antiterminator containing... 157 1e-36 UniRef50_B0NY60 Putative uncharacterized protein n=1 Tax=Clostri... 157 1e-36 UniRef50_C9XL63 Putative transcriptional antiterminator n=9 Tax=... 156 2e-36 UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteri... 156 2e-36 UniRef50_UPI000196BD9B hypothetical protein CATMIT_02553 n=1 Tax... 155 4e-36 UniRef50_B0M974 Putative uncharacterized protein n=1 Tax=Anaeros... 155 4e-36 UniRef50_A4AFC1 Transcription antiterminator, BglG family protei... 152 3e-35 UniRef50_Q5E1U1 PTS system, mannitol (Cryptic)-specific IIA comp... 151 9e-35 UniRef50_A8RJT7 Putative uncharacterized protein n=1 Tax=Clostri... 149 2e-34 UniRef50_B6EP62 HTH-type transcriptional regulator n=1 Tax=Aliiv... 149 2e-34 UniRef50_D1YCX5 Phosphoenolpyruvate-dependent sugar phosphotrans... 149 3e-34 UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=... 148 4e-34 UniRef50_C4FVQ8 Putative uncharacterized protein n=1 Tax=Catonel... 148 6e-34 UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR fa... 148 6e-34 UniRef50_B9Y3X0 Putative uncharacterized protein n=1 Tax=Holdema... 148 9e-34 UniRef50_B1C796 Putative uncharacterized protein n=1 Tax=Anaerof... 147 1e-33 UniRef50_A5Z3Q0 Putative uncharacterized protein n=1 Tax=Eubacte... 144 6e-33 UniRef50_C4V215 N(Pi)-phosphohistidine--sugar phosphotransferase... 144 8e-33 UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collins... 144 9e-33 UniRef50_A8RD41 Putative uncharacterized protein n=1 Tax=Eubacte... 143 2e-32 UniRef50_C5EFX5 Transcriptional antiterminator of lichenan opero... 143 2e-32 UniRef50_C0CYQ2 Putative uncharacterized protein n=1 Tax=Clostri... 143 2e-32 UniRef50_C4FUH4 Putative uncharacterized protein n=1 Tax=Catonel... 143 2e-32 UniRef50_A8RW19 Putative uncharacterized protein n=1 Tax=Clostri... 141 5e-32 UniRef50_Q5WKW9 BglG family transcriptional antiterminator n=1 T... 141 6e-32 UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdema... 141 9e-32 UniRef50_C0QXV4 Transcriptional antiterminator , BglB n=1 Tax=Br... 141 9e-32 UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_... 140 1e-31 UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing prot... 140 1e-31 UniRef50_C5EW03 Phosphoenolpyruvate-dependent sugar phosphotrans... 140 1e-31 UniRef50_C9A090 Predicted protein n=2 Tax=Enterococcus RepID=C9A... 140 2e-31 UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipe... 140 2e-31 UniRef50_C8NIY4 Putative uncharacterized protein n=1 Tax=Granuli... 138 4e-31 UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR fa... 138 5e-31 UniRef50_C9A5U2 Transcriptional antiterminator n=3 Tax=Enterococ... 138 6e-31 UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR fa... 138 7e-31 UniRef50_B3W7W3 Transcriptional activator n=4 Tax=Lactobacillus ... 138 8e-31 UniRef50_B9DT71 Transcriptional regulator (Antiterminator) n=1 T... 138 8e-31 UniRef50_Q928S7 Lin2455 protein n=4 Tax=Listeria RepID=Q928S7_LISIN 138 9e-31 UniRef50_B1CAC3 Putative uncharacterized protein n=1 Tax=Anaerof... 137 1e-30 UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium... 136 2e-30 UniRef50_C5EEI0 Predicted protein n=1 Tax=Clostridiales bacteriu... 136 3e-30 UniRef50_B9YAP5 Putative uncharacterized protein n=1 Tax=Holdema... 136 3e-30 UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_... 136 3e-30 UniRef50_A8SDV4 Putative uncharacterized protein n=1 Tax=Faecali... 134 1e-29 UniRef50_C9XQF7 Transcription antiterminator n=6 Tax=Clostridium... 133 1e-29 UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdema... 133 2e-29 UniRef50_B9Y2V8 Putative uncharacterized protein n=1 Tax=Holdema... 132 4e-29 UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactoba... 132 5e-29 UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli R... 131 8e-29 UniRef50_A6VLW1 Transcriptional antiterminator, BglG n=1 Tax=Act... 131 9e-29 UniRef50_C4VSP6 Putative transcriptional antiterminator n=1 Tax=... 131 9e-29 UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Lis... 131 9e-29 UniRef50_A6LWY3 Transcriptional antiterminator, BglG n=2 Tax=Fir... 130 2e-28 UniRef50_A5KJK5 Putative uncharacterized protein n=1 Tax=Ruminoc... 129 2e-28 UniRef50_C7HSJ2 Putative uncharacterized protein n=1 Tax=Anaeroc... 129 2e-28 UniRef50_Q3CZS6 MW0309, putative n=3 Tax=Streptococcus agalactia... 129 3e-28 UniRef50_C2KEC2 Transcriptional antiterminator n=1 Tax=Lactobaci... 129 4e-28 UniRef50_C2BFG8 Transcriptional antiterminator n=1 Tax=Anaerococ... 129 4e-28 UniRef50_C8ZX11 Predicted protein n=1 Tax=Enterococcus gallinaru... 128 5e-28 UniRef50_A9QSG5 Transcriptional antiterminator, BglG family/Fruc... 128 5e-28 UniRef50_C8NFM1 PRD domain/PTS system IIA domain protein n=1 Tax... 128 5e-28 UniRef50_C3RHR0 Predicted protein n=2 Tax=Bacteria RepID=C3RHR0_... 128 7e-28 UniRef50_B3W767 PRD-and EIIAMtl/Fru-containing transcription ati... 128 8e-28 UniRef50_A8RAH0 Putative uncharacterized protein n=1 Tax=Eubacte... 127 1e-27 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 127 1e-27 UniRef50_C4ZB72 PRD/PTS system IIA 2 domain protein n=1 Tax=Euba... 127 1e-27 UniRef50_C0ES87 Putative uncharacterized protein n=1 Tax=Eubacte... 127 2e-27 UniRef50_C2C4I7 Protein-N(Pi)-phosphohistidine--sugar phosphotra... 126 2e-27 UniRef50_B7C836 Putative uncharacterized protein n=1 Tax=Eubacte... 126 3e-27 UniRef50_B9DPY6 Putative transcriptional regulator n=1 Tax=Staph... 124 7e-27 UniRef50_B0NXI9 Putative uncharacterized protein n=1 Tax=Clostri... 124 8e-27 UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS ... 124 1e-26 UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enteroc... 124 1e-26 UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Stre... 124 1e-26 UniRef50_C0EX25 Putative uncharacterized protein n=1 Tax=Eubacte... 124 1e-26 UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Ba... 124 1e-26 UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostri... 123 2e-26 UniRef50_C1IA41 Transcriptional antiterminator n=1 Tax=Clostridi... 122 3e-26 UniRef50_Q03GK2 Transcriptional antiterminator n=1 Tax=Pediococc... 121 5e-26 UniRef50_B9Y2N3 Putative uncharacterized protein n=1 Tax=Holdema... 121 5e-26 UniRef50_B2TIY2 Putative transcription antiterminator n=3 Tax=Cl... 121 6e-26 UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 T... 121 6e-26 UniRef50_C9A1R6 Predicted protein n=4 Tax=Enterococcus RepID=C9A... 121 6e-26 UniRef50_C5WEK4 Putative uncharacterized protein n=1 Tax=Strepto... 121 7e-26 UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcu... 121 1e-25 UniRef50_C0CWF4 Putative uncharacterized protein n=1 Tax=Clostri... 121 1e-25 UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collins... 120 2e-25 UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax... 120 2e-25 UniRef50_Q3XZH6 Transcriptional antiterminator bglG:Phosphoenolp... 120 2e-25 UniRef50_A5ZAB6 Putative uncharacterized protein n=1 Tax=Eubacte... 119 3e-25 UniRef50_C1QBY4 PTS system IIA component; transcriptional antite... 119 4e-25 UniRef50_A6QKC9 Transcriptional antiterminator BglG family prote... 119 4e-25 UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS sy... 119 4e-25 UniRef50_Q18CM3 Putative transcription antiterminator n=8 Tax=Cl... 118 7e-25 UniRef50_C5ERF8 Predicted protein n=1 Tax=Clostridiales bacteriu... 118 7e-25 UniRef50_C7TG26 PTS system, IIAB component n=2 Tax=Lactobacillus... 118 8e-25 UniRef50_C0CZN4 Putative uncharacterized protein (Fragment) n=1 ... 116 2e-24 UniRef50_C0CVJ7 Putative uncharacterized protein (Fragment) n=1 ... 116 2e-24 UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaeros... 116 2e-24 UniRef50_C7WZJ5 Predicted protein n=7 Tax=Enterococcus RepID=C7W... 116 2e-24 UniRef50_C3RJI5 Transcriptional antiterminator n=2 Tax=Bacteria ... 116 2e-24 UniRef50_B0MAU3 Putative uncharacterized protein n=1 Tax=Anaeros... 116 2e-24 UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Cl... 116 3e-24 UniRef50_A8RA27 Putative uncharacterized protein n=1 Tax=Eubacte... 115 6e-24 UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 ... 114 9e-24 UniRef50_C9ASX5 Transcriptional antiterminator n=18 Tax=Enteroco... 113 2e-23 UniRef50_B4U0E0 Sorbitol operon transcription regulator SrlM n=3... 112 5e-23 UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus ... 111 6e-23 UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Cl... 111 9e-23 UniRef50_Q180U6 Putative transcription antiterminator n=5 Tax=Cl... 110 2e-22 UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus... 109 2e-22 UniRef50_B9DVZ2 Transcription antiterminator n=4 Tax=Streptococc... 109 2e-22 UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax... 109 2e-22 UniRef50_D2EIS8 Predicted protein n=1 Tax=Pediococcus acidilacti... 109 4e-22 UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomon... 108 5e-22 UniRef50_A8S5N7 Putative uncharacterized protein n=1 Tax=Clostri... 108 6e-22 UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconost... 108 7e-22 UniRef50_D0BLL7 PRD domain-containing protein n=2 Tax=Granulicat... 107 8e-22 UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clo... 106 2e-21 UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR fa... 106 3e-21 UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactoba... 106 3e-21 UniRef50_C0CN20 Putative uncharacterized protein n=1 Tax=Blautia... 106 4e-21 UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Cl... 105 5e-21 UniRef50_D0BMI3 PRD domain/PTS system IIA domain protein n=1 Tax... 105 5e-21 UniRef50_B0KCW5 Transcriptional antiterminator, BglG n=9 Tax=The... 105 5e-21 UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostri... 104 1e-20 UniRef50_C6D7L7 PTS modulated transcriptional regulator, MtlR fa... 104 1e-20 UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdema... 104 1e-20 UniRef50_C3RLU7 Predicted protein n=2 Tax=Bacteria RepID=C3RLU7_... 103 2e-20 UniRef50_D1AP53 Putative PTS IIA-like nitrogen-regulatory protei... 103 2e-20 UniRef50_B0NYU6 Putative uncharacterized protein n=2 Tax=Clostri... 103 2e-20 UniRef50_B6G892 Putative uncharacterized protein n=1 Tax=Collins... 103 2e-20 UniRef50_Q5WJN3 Putative uncharacterized protein n=2 Tax=Bacilla... 102 3e-20 UniRef50_B6W9F2 Putative uncharacterized protein n=1 Tax=Anaeroc... 102 3e-20 UniRef50_D0BN54 PRD domain-containing protein n=1 Tax=Granulicat... 102 3e-20 UniRef50_B9Y7S9 Putative uncharacterized protein (Fragment) n=1 ... 102 4e-20 UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttle... 101 8e-20 UniRef50_B3WBC3 LicR (Transcriptional regulator) n=1 Tax=Lactoba... 101 1e-19 UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 T... 100 2e-19 UniRef50_C6VNI0 Sorbitol operon transcription regulator n=3 Tax=... 100 2e-19 UniRef50_C0X3N3 Regulator of sorbitol operon n=23 Tax=Enterococc... 98 7e-19 UniRef50_UPI00017890F3 PTS modulated transcriptional regulator, ... 98 9e-19 UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostri... 98 1e-18 UniRef50_B1C8U8 Putative uncharacterized protein n=1 Tax=Anaerof... 97 2e-18 UniRef50_B0MEI2 Putative uncharacterized protein n=1 Tax=Anaeros... 97 2e-18 UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbi... 96 3e-18 UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metab... 96 3e-18 UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Ali... 95 9e-18 UniRef50_B2TRB2 Putative phosphoenolpyruvate-dependent sugar pho... 94 1e-17 UniRef50_B9DJ28 Putative regulator of sorbitol operon n=1 Tax=St... 94 1e-17 UniRef50_B6G1I6 Putative uncharacterized protein n=1 Tax=Clostri... 94 2e-17 UniRef50_C9BPG8 Transcriptional antiterminator bglG n=7 Tax=Ente... 94 2e-17 UniRef50_B0A8M3 Putative uncharacterized protein n=1 Tax=Clostri... 93 2e-17 UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacill... 93 3e-17 UniRef50_C7TGA7 Transcriptional antiterminator, BglG family n=3 ... 93 3e-17 UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus ... 93 3e-17 UniRef50_B6FXG1 Putative uncharacterized protein n=1 Tax=Clostri... 92 5e-17 UniRef50_B0N368 Putative uncharacterized protein n=1 Tax=Clostri... 92 5e-17 UniRef50_B0MH65 Putative uncharacterized protein n=2 Tax=Clostri... 92 6e-17 UniRef50_B9Y9G7 Putative uncharacterized protein (Fragment) n=1 ... 92 7e-17 UniRef50_C5RM48 Transcriptional antiterminator, BglG n=1 Tax=Clo... 92 7e-17 UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alk... 91 8e-17 UniRef50_Q88S25 Sorbitol operon transcription regulator n=1 Tax=... 91 1e-16 UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=St... 91 1e-16 UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostri... 91 1e-16 UniRef50_Q5WJQ9 BglG family transcriptional antiterminator n=1 T... 91 1e-16 UniRef50_UPI0001C369FF probable licABCH operon regulator n=1 Tax... 91 1e-16 UniRef50_B9Y7U3 Putative uncharacterized protein n=1 Tax=Holdema... 90 2e-16 UniRef50_Q899A8 Transcriptional regulatory protein n=3 Tax=Clost... 90 2e-16 UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecali... 90 2e-16 UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 T... 90 2e-16 UniRef50_B3WB86 Sorbitol operon transcription activator n=8 Tax=... 90 3e-16 UniRef50_C9KLZ6 Putative PTS system, IIA component n=1 Tax=Mitsu... 89 5e-16 UniRef50_D2ELR0 BglG family transcriptional antiterminator n=1 T... 89 5e-16 UniRef50_UPI0001C3629C transcriptional antiterminator (BglG fami... 88 7e-16 UniRef50_UPI0001C35E6F mannitol operon transcriptional antitermi... 88 8e-16 UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacte... 88 9e-16 UniRef50_B0MBK6 Putative uncharacterized protein n=1 Tax=Anaeros... 88 1e-15 UniRef50_B3W851 Phosphoenolpyruvate-dependent sugar phosphotrans... 88 1e-15 UniRef50_B0P028 Putative uncharacterized protein n=2 Tax=Clostri... 87 2e-15 UniRef50_C3WDH7 Predicted protein n=1 Tax=Fusobacterium mortifer... 86 4e-15 UniRef50_A6LQ03 Transcriptional antiterminator, BglG n=3 Tax=Clo... 86 4e-15 UniRef50_B0MJJ5 Putative uncharacterized protein n=1 Tax=Anaeros... 86 5e-15 UniRef50_D1AV48 Transcriptional antiterminator, BglG n=1 Tax=Str... 85 8e-15 UniRef50_UPI0001694250 transcriptional antiterminator, BglG fami... 85 9e-15 UniRef50_C2HE82 BglG family transcriptional antiterminator n=4 T... 84 1e-14 UniRef50_Q5WJH1 BglG family transcriptional antiterminator n=1 T... 84 1e-14 UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR fa... 84 2e-14 UniRef50_Q04I39 Transcriptional regulator, BglG family protein n... 84 2e-14 UniRef50_C3RJP5 Predicted protein n=2 Tax=Bacteria RepID=C3RJP5_... 84 2e-14 UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Cl... 84 2e-14 UniRef50_C4VFI2 HTH domain protein n=23 Tax=Enterococcus faecali... 83 2e-14 UniRef50_A6CNR6 MtlR n=2 Tax=Bacillus RepID=A6CNR6_9BACI 83 2e-14 UniRef50_Q1WQZ9 Sorbitol operon transcription regulator n=2 Tax=... 83 3e-14 UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=... 83 3e-14 UniRef50_B0P2P0 Putative uncharacterized protein n=2 Tax=Clostri... 83 3e-14 UniRef50_C7T9J5 Transcription antiterminator BglG family protein... 83 4e-14 UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacte... 83 4e-14 UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Cl... 83 4e-14 UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_B... 83 4e-14 UniRef50_B0K7D9 PTS system transcriptional activator n=12 Tax=Cl... 82 7e-14 >UniRef50_P32152 Putative phosphotransferase EIIA component n=54 Tax=Enterobacteriaceae RepID=FRVR_ECOLI Length = 582 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 582/582 (100%), Positives = 582/582 (100%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ Sbjct: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 Query: 61 LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE 120 LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE Sbjct: 61 LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE 120 Query: 121 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW 180 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW Sbjct: 121 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW 180 Query: 181 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ Sbjct: 181 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN Sbjct: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI 360 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI Sbjct: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI 360 Query: 361 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII Sbjct: 361 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 Query: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA Sbjct: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 Query: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA Sbjct: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 Query: 541 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG 582 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG Sbjct: 541 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG 582 >UniRef50_C7TGG8 Transcription regulator n=4 Tax=Lactobacillus RepID=C7TGG8_LACRL Length = 569 Score = 501 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 143/595 (24%), Positives = 250/595 (42%), Gaps = 46/595 (7%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 ML R++K++ L QQ + GELA+Q S RTI+RDI +N L + Y Sbjct: 1 MLLLREIKVLRRLSQQDFSGGELAKQLKASRRTIVRDIAAINTELQSSGIGMITTQNKYH 60 Query: 61 LEIFERRSFFQLLQ-KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRY 119 L I LL D + +L L ++ P A L + L T + + + L Y Sbjct: 61 LTILNPGRLMALLDTSRDEANEILLRLCISETIPMADLIAETYLSRTQIMDYISELNADY 120 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHR 179 ++SRPG+G I R+ + A+ + + P L+ D L L+ Sbjct: 121 ADIFRISSRPGMGMTIKMKRLTRIDIAADCIFEYPQLLDKVAPGTDRLPQLT-------- 172 Query: 180 WPLMQGDYLSSLILAIY------ALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRT- 232 DYLS I R Q+ + P S DN V+T Sbjct: 173 ------DYLSENICPYQTWVIDSQWRAQVLAAFICSPSSGTLTAARQSNQI--DNFVKTR 224 Query: 233 ---LTGLIEKQHQQAQVIS--ADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAP 287 L GL + + + Q+ S AD+ Q L I E++ H +R A P Sbjct: 225 EALLMGLGKSRDKIVQMFSEIADDFQ-----------LEAIGQSTFESLFTHFVRECAFP 273 Query: 288 VWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF-DSDLIGLYFACALERHQN 346 ++ + L A P AFD + H + L ++ ++ DSD + LY A+ + + Sbjct: 274 RPLSVLSDYDIAKLSAQNPVAFDYA-HVVALDLFKISHQVWLDSDFLALYIVQAVNQREA 332 Query: 347 ERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIE-PLLIINNSHYL 405 + I+ L+ + ++A IN I++ + N + + RSL E I ++ L I N H + Sbjct: 333 KPVRILFLAPRMSLAQINATIIQQKLHNISLHMVRSLKEAETIFDQRHFDLAIANVRHDV 392 Query: 406 LDDAVNNYI-TVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHI 464 ++ A +++ T ++T I ++ + + R+ AP F + G+ + + Sbjct: 393 VEHASISFVLTFSAVVTDQDIAALEQLVNGQYYRENIAAML-APNHF-VGQITGDKFLTV 450 Query: 465 TRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP 524 ++ V + +A +II RE G L++N ++IPH + +R F I + Sbjct: 451 LQKGLQNFVRNDLLDRADAVKIIEREQAGNQLVLNHISIPHIVTNSVTDYRLFAIKPKEV 510 Query: 525 VEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 + ++++ I ++I + IFSYL L ++ I + Y+ ++LL Sbjct: 511 ITIDDQPIYLLVIVLVGTSQAEKNTIFSYLYQTLRRYVPADIEDVQDYQQVIKLL 565 >UniRef50_C2FPV9 Frv operon regulatory protein n=3 Tax=Lactobacillus plantarum RepID=C2FPV9_LACPL Length = 582 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 123/594 (20%), Positives = 250/594 (42%), Gaps = 28/594 (4%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 MLN R+L+I+ LL++ + +LA S RT++RDI +N L ++ Y Sbjct: 1 MLNSRELRIILLLQEHDLSGEDLAALLETSRRTVVRDIARINGLLRSESIGSIESVKKYH 60 Query: 61 LEIFERRSFFQLLQKHDNDDRLLALLLL-NTFTPRAQLASALNLPETWVAERLPRLKQRY 119 L + R + +LL + +++ L+ L LL + +L + + + ++ ++Y Sbjct: 61 LLVLNRANLNRLLTQSNHESVLVLLNLLVSPNITMGELIERTFMSRQSIMNCIEKINRQY 120 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLI----PLAGITRDNLQHLSTACD 175 + + RP +G + ++ +LA L+ D L+ L + D L + Sbjct: 121 AKILKIRLRPRIGISVSVNHISKIDILAALISDDHQLVEKRFKLINQSED-LARIRMIVK 179 Query: 176 NQHRWPLMQGDYLSSLILAIYALRNQL-TDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLT 234 Q P DYL+ L+ + L + + + +++ SG+ +A TL Sbjct: 180 QQ--IPEKMFDYLTDSQLSAQIMACTLISKDNTVIMKSTLYKVLLKSGVPHLQSA--TLA 235 Query: 235 GLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHR 294 + + Q ++ VQ ++ +L + V I HL R P Sbjct: 236 VFFDAKKQLLNHMTIRQVQLAVRATRSRYTLAAFNHSFVNEIFKHLCRSAMFPTIAPASL 295 Query: 295 QSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILL 354 ++ LK P AFD + L++ + D + I LY A+E ++ Sbjct: 296 SEQISYLKVQNPFAFDFAFDLSKKLQQCFESVQIDDEYIALYVLHAIESPTARNVRTLMY 355 Query: 355 SDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDD------ 408 + Q ++A IN++ I + + N + E+V +E++E L N + ++ + Sbjct: 356 ATQQSVANINKMIITQKISNIDI-------EMVFSKEQLESRLNYINYNLVIGNGVHPND 408 Query: 409 ---AVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHIT 465 +N T +I+ +E +K + ++I++ F F+++ + + Sbjct: 409 LQLPINFDSTFNGVISLDELEHLKSLSSESYIQKNLSSFLPK-SHFYHAPTKYINVNQTL 467 Query: 466 RQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPV 525 + Q +T D+++ ++ARE G L++N +++PH +E ++ F IT + Sbjct: 468 KAGLTNFAEQGLLTNDQSKALLAREAAGNQLVLNHVSLPHASTELSDAYKVFAITFDGIM 527 Query: 526 EVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 +++ I +LI A ++FSYL + L Q + + YE ++ L Sbjct: 528 KIDGNPIYLILIVLANEKRADSGQVFSYLYTRLKQLSNVQLQNVDTYETLIKYL 581 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 365 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 126/649 (19%), Positives = 247/649 (38%), Gaps = 82/649 (12%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSA 57 ML+ RQ +++ L Q Q T E+A+ GV+ RTI D+ L TL A + A Sbjct: 1 MLSLRQEELLKRLMQVEQELTSEEIARMIGVTSRTIRTDMKALKSTLAEHGAVLHIKRGA 60 Query: 58 GYQLEIFERRSFFQLLQK--------------HDNDDR----LLALLLLNTFTPRAQLAS 99 GY L + + SF L+K + +DR L LLL + LA Sbjct: 61 GYTLTVEDYGSFRTFLKKSLGERNEKKEQIIPNQPEDRVAYLLKRLLLSEDYIKLDALAE 120 Query: 100 ALNLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEK-RVILLANLLRK---DP 154 L + E+ V L ++ + ++ RP G + E K R + ++ +K + Sbjct: 121 ELFVSESTVKNDLKAVRHLFSLHGLSVSHRPKYGLRLTGEEMKLRYCMAEHVFQKAHANS 180 Query: 155 FLIP------LAGITRDNLQ----------------HLSTACD--NQHRWPLMQGDYLSS 190 L+P + GI R + H++ AC + + +M L Sbjct: 181 TLLPEETYQFIQGIVRSRTKASGLYLSEIGLSNLVTHIAIACKRIEEKKIVMMPETELKE 240 Query: 191 L-ILAIYALRNQLTDEWP-----QYPGDEIKQIVEH---SGLFLGDNAVRTLTGLIEKQH 241 + + ++ + Q+ ++ ++P E+ I H + + +A TL L+E+ H Sbjct: 241 IQVQPVFQVAQQMAEDIRHVLGIEFPLSEMAYIAIHLMGAKMMAYGDAGHTLFHLLEEDH 300 Query: 242 QQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 + + LL V SLNI D +L+ ++ HL + + R + + Sbjct: 301 FRF-------IHQLLAYVEEHMSLNIQFDKELIVGLSLHLRSAIHRFRYGMNIRNPYLTD 353 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLS 355 +K +P AF+ ++ L+E+ I + + + + L+ A+ER ++ +++ +I+ + Sbjct: 354 IKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEIGYLALHIGAAIERTKSQHVKKRCLIVCA 413 Query: 356 DQNAIATINQLAIERDVL-NCRVIIARSLSELVAIR-EEIEPLLIINNSHYLLDDAVNNY 413 A + + ++ ++ S+ E+ + I+ ++ L V Sbjct: 414 TGVASSQLLLHKLKAAFSERMEIVGTASVGEMSSYDLRSIDFIISTIPLQNTLPVPV--- 470 Query: 414 ITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLV 473 + V I++ I ++K F+ A Q + + +S + + + L Sbjct: 471 VDVHTILSDDDIVRLKRFVQGA---QDTGVLRYVSPALTFFQQDLQSREEVLQFFVNVLK 527 Query: 474 AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVIN 533 Q I + Q ++ RE + +AIPH TL +PV + Sbjct: 528 EQDRIPEEFEQLLLEREQVSPTSFGHLVAIPHPIKPATDDTFCAICTLKKPVLWGENRVQ 587 Query: 534 HVLIACAAADARHELKIFSYLASILCQH--PAEIIAGLTGYEAFMELLH 580 V + + EL+ L + + + +E L Sbjct: 588 VVCLLSIQKTYQKELQSLYQFLVRLTERKEVVDQLIKAASFEELTAALQ 636 >UniRef50_Q724A6 PRD/PTS system IIA 2 domain protein n=29 Tax=Listeria RepID=Q724A6_LISMF Length = 623 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 126/620 (20%), Positives = 243/620 (39%), Gaps = 50/620 (8%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ++ERQ +++ L Q+ T L++ GVS +T+ DI +N + I + GY Sbjct: 3 ISERQRSLLEKLNDSQKTVTAKALSEMLGVSSKTVRNDIVQINQSF-SSTIIASKAGKGY 61 Query: 60 QLEIFERRSFFQLLQKHDN-DDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQR 118 L E+ S L + +N LL ++ T LA + E+ +A + L Sbjct: 62 FLTPNEQLSQINLTKNSENLHFELLRHIIEQDHTNFYDLADQFFISESTLARIIKELNAV 121 Query: 119 YE---RTCCLASRPGLGHFIDETEEKR--VILLANLLRKDPFL-IPLAGITRD--NLQHL 170 + C+ + EEKR L N ++ L + D NL+ L Sbjct: 122 IAEKDESLCIIRKNNELLTEGGEEEKRRIFNLFLNQEIENHQLSLDKYADYFDYCNLKQL 181 Query: 171 S-TACDNQHRWPLMQGDY------------LSSLILAIYALRNQLTDEWPQY--PGDEIK 215 S + D+ + + + Y R LT++ + + Sbjct: 182 SELIIAYHKKNDFFMNDFSTISFILHIAVLIERISMGSYIQRTALTEQDKTSLEMAEHLA 241 Query: 216 QIVEHSGLFLGDNAVRT-LTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLV 273 + +E+ + + L + I A ++ R+ N ID Sbjct: 242 ETLENELQINIPTQELSYIARLYSGKLTTTSTIDAQVFGSVVTRLLEAVDQNFHIDFSAD 301 Query: 274 ENITGHLLRCLAAPVWIAEHRQSSMN----NLKAAWPAAFDMSLHFITLLREQLDIPLFD 329 E I +L+ ++A A H+Q N LK +P +++S++ ++++L I D Sbjct: 302 EKIATYLVAHISALYKRANHKQYLTNPLTEELKNKFPFIYNVSVYASAFIQKELAITFPD 361 Query: 330 SD--LIGLYFACALER-HQNERQPIILLSDQNAIATI---NQLAIERDVLNCRVIIARSL 383 + I L+F A E + +++ I+L+S A + NQL D + +++++S+ Sbjct: 362 DEIAYIALHFLSASETINHGKKRKILLVSPYGAGSQRLIHNQLKKIAD-FSIDLLVSQSI 420 Query: 384 SEL--VAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQP 441 ++ + +EI ++ + D V +Y ++T +++IKH L T Sbjct: 421 FDIKQFTLDKEIHLIITAEPLNLTTDIPVYHYDL---LLTETDLQKIKHILETKPKADSI 477 Query: 442 ER-FFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNR 500 R FF F N + S + + +C QL A + +D ++ RE N Sbjct: 478 SRKFFKKELFFPKQNFK--SKEEVITFLCEQLTAFDYCDSDYVSKVFEREQLSSTCYGNY 535 Query: 501 LAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL-KIFSYLASILC 559 AIPH ++ L +P++ + VL+ + + ++F L +IL Sbjct: 536 YAIPHAIQRSAKKNAVAVCALDKPIDWGGNRVKLVLLLTMKEERDNSFEELFGQLVTILN 595 Query: 560 QHP-AEIIAGLTGYEAFMEL 578 + + +A ++ F+EL Sbjct: 596 ERSFVKKLAKQEDFQQFIEL 615 >UniRef50_C0X124 PRD/PTS system IIA 2 domain protein n=3 Tax=Enterococcus faecalis RepID=C0X124_ENTFA Length = 634 Score = 270 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 112/646 (17%), Positives = 221/646 (34%), Gaps = 97/646 (15%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 L +Q +I+ LE Q T ELA+ G + RTI + +N S G Sbjct: 4 LESKQREIILFLESQQHHWVTAKELAEFCGCTTRTIRNRVAKIN---EAYPEAILSSQRG 60 Query: 59 YQLEIFERRSFFQLLQKHDNDDRLLALLL--LNTFTPRAQLASALNLPETWVAERLPRLK 116 Y+ ++ S Q + R+ LL + LA L + E+ L +LK Sbjct: 61 YRRN--DQISILQETPSKERKARIFLELLKHSSEGVNLYDLADCLYISESTAKNDLQQLK 118 Query: 117 QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDN 176 + G ++ TE + + +LL + + + + + Sbjct: 119 EELANQQTTICFKGANIWLTGTERAKRQYMVSLLYAESDFQEKLTRSVREMIGYISLEEL 178 Query: 177 QHRWPLMQGDY----------------------------------LSSLILAIYALRNQL 202 + +Y L+ Y + ++ Sbjct: 179 EEMIQQTFFNYERRLNQYVLNNIVLHYAISIERIRQGHTLLTKPKLAENHSEEYQMAKEI 238 Query: 203 TDEWPQ-----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGL-- 255 + + +E+ Q+ S LF+G T+ ++ Q Q+++ ++ L Sbjct: 239 ALRLEETYDILFSKEELAQL---SLLFVGIQKEHTVNS---EKTQLQQIVNPKIIEVLEE 292 Query: 256 -LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 LQ+V I + + + + + HL A R S + +LK +P +D+S++ Sbjct: 293 VLQKVEQIYFIQLKNKEFFNKLAIHLQGLYDRSNVEAFTRNSRLWDLKTGYPLIYDISVY 352 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDV 372 + ++E+L+I + + I L+ LE + E+QP +LL + D Sbjct: 353 ISSFIQERLNIWFTEDEISFIALHLGSFLESQRTEQQPFLLL------------LVVEDY 400 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA-AGIEQIKHF 431 N R ++ + L E + I+ + N D V T + + T G I F Sbjct: 401 HNMREVLQKKLQEHFGNQINIKVVRQTNIDQKKFDLLVT---TNRRLATKYEGAIFIHPF 457 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHI-------------------TRQICAQL 472 + T +R+ R + G + + Q I Q+ ++ Sbjct: 458 ITTKELRKIENRMYLLKGQKRKRQMEIRTDQFIAKELYFSQIDPADLTPEMLLDQMIQRM 517 Query: 473 VAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI 532 Q + ++D + + RE + +A+PH + +TL +P+ N + Sbjct: 518 RIQKYCSSDFKKSVKKREQLSPTSFPSGIAVPHAIDRTAEKSGISIMTLQEPIRWANYEV 577 Query: 533 NHVLIACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFM 576 V + + F + P + ++ Y AF+ Sbjct: 578 KLVALVAIRQEDAPIFDDFFEKFIEIMSEPIHIKQLSQTADYAAFV 623 >UniRef50_O31644 Putative phosphotransferase enzyme IIA component n=19 Tax=Bacillaceae RepID=MANR_BACSU Length = 648 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 126/661 (19%), Positives = 234/661 (35%), Gaps = 104/661 (15%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 +N RQ +I+ LL +P + A + S +TI D+ + LN + G Sbjct: 4 INTRQKEILYLLLSEPDDYLVVQDFADRVQCSEKTIRNDLKVIEDYLNEHSHAQLIRKPG 63 Query: 59 Y----QLEIFERRSFFQLL-------QKHDNDDRLLA----LLLLNTFTPRAQLASALNL 103 +E ER Q L ++ + +R+L LL+ +A+ + Sbjct: 64 LGVYLHIEEQERTWLSQQLHTEHFSSRQRSDKERMLHIAYDLLMNPKPVSAKDIAARHFV 123 Query: 104 PETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANL------------- 149 + + + L +++ +R L SR LG ++ E + LA + Sbjct: 124 NRSSIKKDLYAVEEWLKRFDLTLVSRQRLGLKVEGNERNKRKALARISDLIHNTAFTSQF 183 Query: 150 -------------------LRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSS 190 L+K L L H R + Q LS Sbjct: 184 IKSKFLHYEVDFVTKEIKSLQKKHSLYFTDETFESLLLHTLLMVR---RIKMKQPISLSP 240 Query: 191 LILAIYALRNQLTDEWPQ-----------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEK 239 +A + + + +P +E + H LG L + Sbjct: 241 KEMAAVKKKKEYQWTFACLQRLEPVFAIRFPEEEAVYLTLH---ILGGKVRYPL----QT 293 Query: 240 QHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSM 298 + + V L+ RV + ++ D L+ + HL L + + Sbjct: 294 EENLENAVLPKVVGHLINRVSELKMMDFHKDQDLINGLNIHLNTVLQRLSYDLSVANPML 353 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLD--IPLFDSDLIGLYFACALERHQ----NERQPII 352 N++K +P F + + + + + D IP ++ + L+F A+ER Q ++ +I Sbjct: 354 NDIKKMYPYLFHLIIDVLEDINQTFDLHIPEEEAAYLTLHFQAAIERMQGSSETHKKAVI 413 Query: 353 LLSDQNAIATINQLAIERDVLNCRVIIA---RSLSELVAIREEIEPLLIINNSHYLLDDA 409 + ++ + + IER V+ L + + E+I+ ++ Sbjct: 414 VCHMGIGMSQLLRTKIERKYHQIAVMACIAKADLKDYIKKHEDIDLVISTIALE------ 467 Query: 410 VNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSN----------VRGE 459 ITV +I+ + +E + +AFIRQ E +F N E Sbjct: 468 ---NITVPHIVVSPLLEPGEEKKLSAFIRQLGESHRQKQKTFQMLNNTTPFLVFLQQEAE 524 Query: 460 SWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFI 519 + Q+ L + ++ D A + RE I + +AIPH ++ ++ Sbjct: 525 HRYKLIEQLATALFEKGYVDKDYAVHAVMREKMSATNIGSGIAIPHANAKFIKQSAIAIA 584 Query: 520 TLAQPVEVNNEVINHV-LIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMEL 578 TL +P+E NE ++ V ++A D ++FS L S L + PA + LT M Sbjct: 585 TLKEPLEWGNEKVSLVFMLAVKHEDQTMTKQLFSEL-SYLSEQPA-FVQKLTKETNVMTF 642 Query: 579 L 579 L Sbjct: 643 L 643 >UniRef50_C0D9V6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9V6_9CLOT Length = 642 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 120/647 (18%), Positives = 229/647 (35%), Gaps = 79/647 (12%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M N+RQ +++ LL ++ T +LA+ VS RTI D++ +N + G Sbjct: 1 MQNKRQEQLLALLAERRDYMTSRQLAEILQVSDRTIRSDVEAINRRSSPPPIESNVRQ-G 59 Query: 59 YQLE----IFERRS-FFQLLQKHD----NDDR----LLALLLLNTFTPRAQLASALNLPE 105 Y+L + S +QK DR + LL L + + Sbjct: 60 YRLNPEAAVLPPASELDAGIQKDQLPQTPGDRCIYIIHKLLFEARELNLTVLQGQIYVSG 119 Query: 106 TWVAERLPRLKQR---YERTCCLASRPGLGHFIDETEEKRV--ILLANLLRKDPFLIPLA 160 + L R+++ Y + SR + DE ++R LL ++++ + L Sbjct: 120 YSIENDLKRIRRMLEPYANLKLVRSRECISLKGDEASKRRFYRDLLVAEVQEN--FLNLN 177 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDY-LSSLILAIYALRNQLT------------DEWP 207 + + L + DY + + + L + ++ Sbjct: 178 TLAHLYRSFDLIEVKDIFVEVLEEYDYAIHEALFPMLILHAGTSIERMNCSNYINMEDNS 237 Query: 208 QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI-------------------- 247 Q D I+ + + + E ++ Sbjct: 238 QGLSDTIEYQISKTFFDRIGKRLHIQVHDGEIGMFALVIMGRRASNYTSDYVNLNGRWLN 297 Query: 248 SADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 + V L +V + L+ DA L+ + H+ + + ++ +K +P Sbjct: 298 TKKLVAEALDKVFCLFGLDFREDADLIAGLKMHIHGLIDRLKTGVKLEDVFLDEIKRKYP 357 Query: 307 AAFDMSLHFITLLREQLDIPLFD--SDLIGLYFACALERHQNERQ--PIILLSDQNAIAT 362 F+M ++ L+E+L + + D S I L+ A ER R+ +++L + + Sbjct: 358 LVFEMGIYVGEFLKEKLGLSISDVESGFIALHLGAASERLNAARRYRAVMILPHNQSFSA 417 Query: 363 INQLAIERDVLNCRVIIARSLSELVA-IREEIEPLLIINN---SHYLLDDAVNNYITVKN 418 + + I D+ R+ + R+ S I E++P LI+ H L + VN + V + Sbjct: 418 MCEKKIS-DMFRERMEVVRTFSYFEEEIVREMDPDLILCTFPIEHRLDVETVNINLFVDS 476 Query: 419 IITAAGIEQIKHFLATAFIRQQPERFFSAPGSF-----HYSNVRGESWQHITRQICAQLV 473 + ++ + F + F S G+ +Y ++ + + +CA L Sbjct: 477 QTESNILQAVNRLDQKRFKLE----FASHIGNLVRKEHYYQDLDLNTPGQVIDLLCADL- 531 Query: 474 AQHHITADEAQRII-AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI 532 Q I E + I+ RE VN AIPH + + L PV+ + Sbjct: 532 EQAGIVEPEFKEIVRKREEMSPTSFVNAFAIPHAFGAFAKNSTIAVAQLKNPVKWGGFEV 591 Query: 533 NHVLIACAAADARHELKIFSYLASILCQHPAE--IIAGLTGYEAFME 577 V++ R +KIF S + P E I YE F++ Sbjct: 592 RLVMLFAINEGDRRMIKIFFDWVSNVVNQPQELAKICSSCSYEEFID 638 >UniRef50_B9Y3S8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3S8_9FIRM Length = 631 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 127/631 (20%), Positives = 230/631 (36%), Gaps = 62/631 (9%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 MLNE+ +++ LL++ P T G LAQQ +S RT R I L L S G Sbjct: 1 MLNEKMFQLIQLLKRGHSPLTSGMLAQQLKLSARTCKRYIAELIPLLEQHGARILSDKTG 60 Query: 59 YQLEIFERRSFFQLLQKH-------DNDDRL----LALLLLNTFTPRAQLASALNLPETW 107 Y+LEI + F LQ+ +N+ L L LL+N ++++ L + + Sbjct: 61 YRLEIIDAARFEAFLQEKTKVFEFSENNGELQFGILKSLLVNPTISQSEMIDQLFISRST 120 Query: 108 VAERLPRLKQRY-ERTCCLASRPGLGHFIDETE-------EKRVILLANLLRKDPFLIPL 159 + + + +K+ E LA+RP G++I E K + + A+ L +P L+ Sbjct: 121 LNKLMVEVKKTLKENGILLANRPYYGYYIVGDEVDIRNFMVKTLFVTASFLSAEPELLAR 180 Query: 160 AGITRDN-LQHLSTACDNQHRWPLMQ-----GDYLSSLILAIYALRNQLTDEWPQYPGDE 213 + + + P YL + I QL P + Sbjct: 181 MPFALSRSVSQICQILKAEGIPPEEDLVHYCLKYLMVSLCRIQG-GAQLRLSLP-SLSET 238 Query: 214 IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN-----------------VQGLL 256 ++ V+ + + D L E++ A +I V +L Sbjct: 239 LQPAVQRAASAILDLFCGPLVINDEERLYFASIIGNRTPLPPDEALASADWLRELVDDML 298 Query: 257 QRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 + + ++ DA+L + + HL + A M +K+ + A++ SL Sbjct: 299 NNILNLCKVDFRSDAKLRKALMTHLYASFSRYYLKATLPNPLMTLIKSQYVEAYNYSLIG 358 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERHQNER--QPIILLSDQNAIATINQLAIERD 371 +L+E+ + + D D I L+FA ALE+ + + +I+ + + +L + R Sbjct: 359 CEMLKEKHHLAINDDDIGYIALHFAAALEKDRAAMLCRTVIVCGSGIGTSELIRLRLSRK 418 Query: 372 VLNC---RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 + V+ + L + A I+ II + I + ++T+ I +I Sbjct: 419 IPQLVIQDVLASYELPDFSA----IDVDFIITTVPLPAGNNPLPSILISPMVTSEDIHKI 474 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 + + Q F F V G++ + A +V I+ A I Sbjct: 475 EFMIHNYSSLQYLRSLFREELFFPA--VEGKTKAEALDSLTASMVETGLISEAFATAIKE 532 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE I +AIPHC+ L +PV + + I + Sbjct: 533 REAMSSTEITETVAIPHCFLSVPIDTMLAVGILKEPVMWGRSRVQLLFIGIINPAVKKNK 592 Query: 549 KIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 +F + ++ E + LT L Sbjct: 593 CVFPMIYRLI--QDPEKVQRLTRQTEADTFL 621 >UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Q3_9FIRM Length = 655 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 107/620 (17%), Positives = 223/620 (35%), Gaps = 88/620 (14%) Query: 6 QLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI-- 63 QL + LL ++ T G+LA++ G+S +TI ++ +N L + + Sbjct: 11 QLILKALLNKEMVTTGQLAEEIGLSEKTIRTKVEVINNMLLDNQLGEICKKPRIGIWLDA 70 Query: 64 --FERRSFFQLLQKHDNDDRL----------LALLLLNT---FTPRAQLASALNLP---- 104 +R L+ N D L L L+L +T QLAS L L Sbjct: 71 DPQQRLKINSLINNSANMDVLQNDQIRTATALKLILKSTKNNTLTTKQLASQLYLSVPTT 130 Query: 105 -------ETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEE-----KRVILLANLLRK 152 +W+ L + LA + + + + ++L Sbjct: 131 LKVINDCRSWLKLFNIELNVVRNKGLELAYN-EVSYRLALKHFILKFDTETNVEESILFF 189 Query: 153 DPFLIPLAGITRDNL---------------------QHLSTACDNQHRWPLMQG-DYLSS 190 P L L I R + L+ + Q ++ D Sbjct: 190 MPGL-DLDAIRRGIMETEKEWSFEFAEESFNEVLVYASLAIYQNQQKNGRKLKFSDEELE 248 Query: 191 LILAI--YALRNQLTDE-----WPQYPGDEIKQIVEH---SGLFLGDNAVRTLTGLIEKQ 240 ++ Y+ + + P +E + S L + + L E Sbjct: 249 MLQKYNEYSFAEAIFKKLGAHFNMTLPTEEKAFLSIQILCSKLIDSGYSADSGEVLREYD 308 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMN 299 ++ + V+ ++ V + ++++ D LV + H+ L + H N Sbjct: 309 NKLQEF-----VRKIISVVSNVLNVDLTHDEALVHGLLIHMRPTLFRLRYERGHTNGLTN 363 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQ 357 +K + F ++ L E D+ + + + I LY ALER++N P+ + Sbjct: 364 YIKTEYKKTFRVAWLISVLFEEYFDLKVSEDELGYIVLYIQSALERNEN---PVRTMLVS 420 Query: 358 NAIATINQLAIERDVLNCRV-IIARSLSELVAIREEIEPL-LIINNSHYLLDDAVNNYIT 415 + INQ+ ++ + + + +S E++E + LI+ L D + Sbjct: 421 ASGMGINQMLCDKICRSFSLIHSVKVVSVHDFKIEKVEDVDLILTTRELGLHDP--RIVE 478 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS------FHYSNVRGESWQHITRQIC 469 + + ++ A I++I H++ + + E F A ++++ + + + +C Sbjct: 479 IDDFLSDASIQKINHWIRNTILNKVSEAQFDADCHQLFEPDLIFTHLEIDDKPALLKFLC 538 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 +LV + ++T + ++ RE I N +AIPH + R TL +P+ ++ Sbjct: 539 DRLVRKGYVTRKYVKTVLDREAFTPTSIGNGVAIPHGDQNEINEARVVIATLEKPILWDS 598 Query: 530 EVINHVLIACAAADARHELK 549 E ++ + + E++ Sbjct: 599 EQVDVIFLLVVKMTNDFEIR 618 >UniRef50_A8RTN9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTN9_9CLOT Length = 639 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 112/644 (17%), Positives = 224/644 (34%), Gaps = 76/644 (11%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M N+RQ +++ +L ++ T +LA VS RTI D++ +N + G Sbjct: 1 MQNKRQEQLLAILSERRDWMTSRQLAGLLQVSDRTIRSDVEAINKHTDPPPIESNVRQ-G 59 Query: 59 YQLEIFERRSFFQLLQKHDND----------DRLLALLLLNTFTPRAQLASALNLPETWV 108 Y+L R + + + D + LL L S + + + Sbjct: 60 YRLCEEARPALASGAETREADIPQTPGARCAYMIQKLLFEVKELNLTMLQSQIYVSGYSI 119 Query: 109 AERLPRLKQRYE--RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF----------- 155 L R+++ E L R + E + +LL + Sbjct: 120 DNDLKRIRKMLEPYSGLKLV-RNKECISLKGDEASKRRFYRDLLVAEVQENFLNLNTLAH 178 Query: 156 ------LIPLAGITRDNLQHLSTACDNQ--HRWPLMQGDYLSSLILAIYALRN---QLTD 204 LI + I D L+ + L G + + A Y Q + Sbjct: 179 LYRSFNLIEVKDIFVDVLEEYDYSIHESMFPMLILHAGTSIERMNCANYINMEEGMQGLE 238 Query: 205 EWPQYPGDEIK---------------QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA 249 + +Y + ++ + + +G A + + + + Sbjct: 239 DTIEYQIAQTFFDRISKRLHITVHDGEVGMFALVIMGRRASNYTSDFVNYNGKWMN--TK 296 Query: 250 DNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 V L++V + L+ DA LV + H + + +K +P Sbjct: 297 KLVAEALEQVYALFGLDFRQDADLVAGLKMHFHGLIERVKNQVRMEDVFVEEIKRKYPLV 356 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER--QPIILLSDQNAIATIN 364 F+M ++ + L ++L+ P+ D + I L+ A ER + R + +++L + + + Sbjct: 357 FEMGIYVLEFLEQRLERPISDVESCYIALHLGAASERMNSVRKYRAVMILPHNQSFSDMC 416 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREE-IEPLLIINN---SHYLLDDAVNNYITVKNII 420 I D+ R+ + ++ ++P L+++ H L + V+ + V + Sbjct: 417 VKKIS-DMFRERMEVVKAFGYFEEDEVSALDPDLLLSTFPLEHGLDVETVSINLFVDSET 475 Query: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPGSF-----HYSNVRGESWQHITRQICAQLVAQ 475 + ++ I F + F S G+ ++S V + + I R +CA L + Sbjct: 476 ESKILQAINRLDKKGFRLE----FTSHIGNLIRKEHYHSQVDMDQPEEIIRMLCAGLEKE 531 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 + + + ++ RE VN AIPH + R L PV+ + V Sbjct: 532 GIVEPEFTEVVLKREQMSPTSFVNTFAIPHAFGAFARNSTIAVAQLKNPVKWGAFEVRLV 591 Query: 536 LIACAAADARHELKIFSYLASILCQHPAE--IIAGLTGYEAFME 577 ++ +KIF S + P E + YE F++ Sbjct: 592 MLFAINEGDARMIKIFFDWVSNVVNQPEELAKLVAPCSYEEFID 635 >UniRef50_C5EV18 Transcription antiterminator BglG family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV18_9FIRM Length = 640 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 108/642 (16%), Positives = 217/642 (33%), Gaps = 71/642 (11%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M N RQ +++ +L ++ T +LA GVS RTI D++ +N + G Sbjct: 1 MQNVRQEQLLAILSERGDWMTSRQLAGLLGVSDRTIRSDVEAINKRITPAPIESNVRQ-G 59 Query: 59 YQLEIFERRSFFQLLQKH-------DNDDR----LLALLLLNTFTPRAQLASALNLPETW 107 Y++ R S +K+ R + LL L + + Sbjct: 60 YRVMEDARTSIPAPEKKNLGPEVPQTPGGRCIYIIQKLLFETRELNLVSLQDQIFVSGYS 119 Query: 108 VAERLPRLKQR---YERTCCLASRPGLGHFIDETEEKRV--ILLANLLRKDPFLIPLAGI 162 + L R+++ Y + +R + DE ++R LL ++++ + L Sbjct: 120 IDNDLKRIRRMLEPYTNLKLVRNRECISLKGDEASKRRFYRDLLVAEVQENFLNMNLLAG 179 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDY-LSSLILAIYALRN-------------------QL 202 + + A + L + DY + + + L Q Sbjct: 180 LYKSFDLI--AVKDIFVDVLEEYDYSIHESMFPMVILHAGTSIERMNCANYVNMDNGSQG 237 Query: 203 TDEWPQYPGDEIK---------------QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI 247 ++ +Y ++ + + +G A + + + + Sbjct: 238 LEDTIEYQISMTFFDRISKRLHIEVHDGEVGMFALVIMGKRASNYTSDFVNFEGKWLN-- 295 Query: 248 SADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 + V L + + L+ D L+ + H+ + A + + +K +P Sbjct: 296 TKKLVAEALDGIYSLFGLDFREDGDLIAGLKMHIHGLIDRVKAKAHMQDVFVEEIKRKYP 355 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER--QPIILLSDQNAIAT 362 FDM ++ + LL E+L+ + + + I L+ A ER + R + I+++ + Sbjct: 356 LVFDMGIYVVELLEEKLEASISEVESCYIALHLGAASERINSVRKYRTIMIIPHNQTFSD 415 Query: 363 INQLAIERDVLNCRVIIARSLSELVA-IREEIEPLLIINN---SHYLLDDAVNNYITVKN 418 + I ++ RV + ++P LI+ H L V + V + Sbjct: 416 MCVKKIS-EMFRERVEVVGIFRYFEEETVSSLDPDLILTTFPLEHKLDVPTVPINLFVDS 474 Query: 419 IITAAGIEQIKHFLATAFIRQQPERFFSAP-GSFHYSNVRGESWQHITRQICAQLVAQHH 477 + ++ + F + S + NV + + I R +C L + Sbjct: 475 ETESGILQAVNKLDKKQFQLEFTSHIGSLIRKEHFHENVTLGTPEEIIRLLCRGLEKEGI 534 Query: 478 ITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLI 537 + D ++ RE VN AIPH + L PV N + V++ Sbjct: 535 VEPDFKDIVLKREQMSPTSFVNAFAIPHAFGAFASHSTIAVAQLKSPVRWGNFDVGLVML 594 Query: 538 ACAAADARHELKIFSYLASILCQHPAE--IIAGLTGYEAFME 577 +KIF S + P E + YE F++ Sbjct: 595 FAINEGDERMIKIFFDWVSNVVNRPEELAKLVSSCTYEEFID 636 >UniRef50_P46321 Putative phosphotransferase enzyme IIA component n=2 Tax=Bacillus RepID=LICR_BACSU Length = 641 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 115/653 (17%), Positives = 225/653 (34%), Gaps = 88/653 (13%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSA 57 ML+ R I+ LL + P T A Q V+ RT+ DI L L+G S + Sbjct: 1 MLHGRLRDILRLLMAAEAPVTSSFFAAQLNVTTRTVRNDIKELQGVLSGHGAFVQSVRGS 60 Query: 58 GYQLEIFERRSFFQLLQKHDNDDR-------------LLALLLLNTFTPRAQLASALNLP 104 GY+L I + + F LLQ + + LLL + + +LA L + Sbjct: 61 GYKLRIDDEQVFRTLLQDEFQQKKGLPVLPEERMAYLMKRLLLADHYLKLDELAEELFIS 120 Query: 105 ETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGI 162 ++ + L +K+R + +RP G + E + R + ++ + I + Sbjct: 121 KSTLQTDLKEVKKRLLPYRIVMETRPNYGFKLRGDEVQMRYCMAEYIVDERETEIDVLNE 180 Query: 163 TRDNLQ--------------------------------HLSTACDN---QHRWPLMQGDY 187 D L H++ AC ++ L D Sbjct: 181 KADILPKEEIEIIRSAILKKMKNDRIPLSNMGLNNLIIHIAIACKRIRTENYVSLFPKDM 240 Query: 188 LSSLILAIYALRNQLTDEW-----PQYPGDEIKQIVEH---SGLFLGDNAVRTLTGLIEK 239 L Y + E +P DE I H + + E+ Sbjct: 241 DHILHQKEYQAAEAIVKELESKLSVTFPKDETAYITMHLLGTKRMTQSQCGEDTFSIEEE 300 Query: 240 QHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSM 298 Q + ++ V L I+ D +L + H+ ++ + R + Sbjct: 301 TDQLTLAM--------IKAVDRELKLGILHDKELKIGLALHMKPAISRNRYGMNLRNPML 352 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP---IIL 353 +K +P AF+ + +++EQ I + +++ + L+F A+ER + E P II+ Sbjct: 353 AAIKEHYPLAFEAGIIAGIVIKEQTGIEIHENEIGYLALHFGAAIERKKTESPPKRCIIV 412 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSEL---VAIREEIEPLLIINNSHYLLDDAV 410 + A + + + R R+ I + E I+ ++ L V Sbjct: 413 CASGAGSAQLLREKL-RSHFGKRLDILGTAEYYSLDQMSYESIDFVISTIPIKKELPVPV 471 Query: 411 NNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICA 470 + V I+ +I+ L+ ++ + + S + + + + Sbjct: 472 ---LKVNTILGGTDFTKIESILSD----EKEKANRYLKKELVFFQEDLRSKEEVIQFLGQ 524 Query: 471 QLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE 530 ++V + I RE N +AIPH Q + TL +P++ ++ Sbjct: 525 KVVECGFADEEIIDSIFEREDMSPTCFGNLVAIPHPLVPQTKTTFWAVCTLKKPIDWESQ 584 Query: 531 VINHVLIACAAADARHELKIFSYLASILCQHPAE--IIAGLTGYEAFMELLHK 581 + V + C + + +L+ L + PA + Y+ ++ + Sbjct: 585 RVQFVCLLCVEKENKADLQSMYKLLGSILDDPAAMNQLIKCRSYQELSDVFDQ 637 >UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 Length = 651 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 104/626 (16%), Positives = 214/626 (34%), Gaps = 71/626 (11%) Query: 17 PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQLEIFERRSFFQLLQK 75 P T +A V+ RT+ DI L + S +GY+L I + F LQ Sbjct: 19 PVTSSVIAANVKVTTRTVRNDIKELQTIVEKHGASIQSVRGSGYKLLIRNEQPFKNWLQD 78 Query: 76 HDNDDR-------------LLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE-R 121 + + + +LL + + LA L + ++ + L +K+R Sbjct: 79 NFQQNSTVPIFPDERIDYLMKRMLLADGYLKLDDLAEELFISKSTLQSDLKEVKKRLRPY 138 Query: 122 TCCLASRPGLGHFIDETEEK-RVILLA----------NLLRKDPFLIPLAGITRDNLQ-- 168 L +RP G + E + R + +LL + ++P I Sbjct: 139 DIILETRPNYGFKLRGEELRLRYCMAEYLVDDREPEPDLLSEKAGILPKDDIHVIRTAIM 198 Query: 169 --------------------HLSTACDN---QHRWPLMQGD----YLSSLILAIYALRNQ 201 H++ AC ++ L+ D L + + A+ + Sbjct: 199 KQVRNHKIPLSFFGLNNLIIHIAIACKRIRTENYVSLIPEDLHDIKLETEYQSAEAIVKE 258 Query: 202 LTDEWPQ-YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVP 260 L +P E I H LG + ++ + ++ + +++ + Sbjct: 259 LESALSVTFPEQETAYIAIH---LLGTKRMAQSQLEGKELTRLIDGETSRLTEAMIEAIE 315 Query: 261 GIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 L I D +L + H+ + + R ++ +K +P AF+ + ++ Sbjct: 316 RELKLGITDDNELKAGLALHIKPAINRNRYGMNLRNPMLSAIKENYPLAFEAGVIAGIVI 375 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIE--RDVLNC 375 +EQ I + +++ + L+F A+ER + ER P L + A QL E R Sbjct: 376 KEQTGIDIHENEIGYLALHFGAAIERRKTERPPKRCLIVCASGAGSAQLLREKLRSRFAK 435 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 R+ I + ++ L + + + + V + + A Sbjct: 436 RLEIVGTADYC-----SLDQLSFESIDFVVSTVPIKKDLPVPVLKVHTLLGGGDFTKIDA 490 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 + ++ E+ + E+ + + R + Q+ + I RE Sbjct: 491 MLEEKREQLNFLKPELVFLQQDLETKEDVIRFLGQQVAEAGLASDSLTDSIFEREAISPT 550 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLA 555 N AIPH Q TL +P++ ++ + V + C +++ +L+ Sbjct: 551 SFGNLTAIPHPLVPQTDTTFWAVCTLKKPIDWADKRVQFVCLLCVEKESKADLQHMYKWL 610 Query: 556 SILCQHPAEI--IAGLTGYEAFMELL 579 + PA + + T Y+ + + Sbjct: 611 GGMLDDPAAVSRLLKCTTYQEVLRVF 636 >UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan operon n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKS9_BACSK Length = 649 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 116/636 (18%), Positives = 230/636 (36%), Gaps = 81/636 (12%) Query: 1 MLNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSA 57 ++N+R I+ L Q T LA V+ RT+ D+ L L N A I + Sbjct: 10 IMNQRLQSILRELLGTQGYVTSRYLASVNQVTPRTVREDVKQLQTELANIHAGIESVPGK 69 Query: 58 GYQLEIFERRSFFQLLQKH---------DNDDR----LLALLLLNTFTPRAQLASALNLP 104 GY+L I + F Q LQ+ ++R + LLL + LA L + Sbjct: 70 GYKLTIEDEAQFRQFLQRETTGNHGAPISPEERVTWLIQKLLLAEEYIKLDDLADDLFIS 129 Query: 105 ETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLR------------ 151 ++ + L K R +A+RP G ++ E KR +A + Sbjct: 130 KSSLQNDLKNAKLILARYGLQVATRPNYGLYLKGDELKRRFCMAEYVFERKNVAADLTSL 189 Query: 152 ------KDPFLIPLAGITRDNLQ----------------HLSTACDN---QHRWPLMQGD 186 K+ L + I +Q H+ A H L + D Sbjct: 190 QLTAFMKEEQLADIWDILVTTMQENGVTLSDIAINNLFIHIVIAFKRIEAGHHISLYRKD 249 Query: 187 YLSSLILAIYALRNQLTDEW-----PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH 241 Y + ++ +P EI I H LG V + Sbjct: 250 MSDICSQHEYYVAQKMIARLNTHLGVSFPEMEIAYIAIH---LLGTRLVAENEQANDNLK 306 Query: 242 QQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 + + ++++V LNI D +L+ ++ HL + + R + + Sbjct: 307 KVFDDEYYKLAKAIVEKVERELDLNIANDQELLVSLMLHLKPAINRYRYGMNIRNPMLAD 366 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP---IILLS 355 +K + AF+ ++ +++++L I + +++ + L+ ALER +++P +I+ + Sbjct: 367 IKQHYTLAFEAAVIGQAVIKDKLGISIDENEIGYLALHIGAALERRNQQKEPKRILIVCA 426 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIR---EEIEPLLIINNSHYLLDDAVNN 412 A + + +E + R+ I + + I+ ++ + V Sbjct: 427 SGRGSAQLLKYKLEAN-FKKRLFIVDTTEYYQIDQADLTNIDLIVTSIPIKKKMPVPV-- 483 Query: 413 YITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQL 472 + V I+ +E+I+ +R + +S + + R + QL Sbjct: 484 -VEVNTILGTEDLERIE-----IQLRHGDSLLSYTEAGLVFLQQSLKSKEDVLRFLDKQL 537 Query: 473 VAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI 532 + ++ + ++ RE N +AIPH + Q + F+TL +PV N + + Sbjct: 538 RERGVVSKGFYEALVKRENLASTAYGNLVAIPHPITPQTEKTFLAFVTLKEPVSWNGKPV 597 Query: 533 NHVLIACAAADARHEL-KIFSYLASILCQHPAEIIA 567 V + C + +L ++++ L +L Sbjct: 598 QLVCLLCVKQGSTEDLERVYNQLLYVLDHRDIVQEC 633 >UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK9_BACCO Length = 620 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 112/636 (17%), Positives = 233/636 (36%), Gaps = 70/636 (11%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSA 57 M++ RQ +I+ LL++ P + ++ G+S RT+ +I + + Sbjct: 1 MVSNRQKQILWLLQKSAGPLNAKAIGERLGISDRTVREEIRQIQQKSDALGVKLKVLRGK 60 Query: 58 GYQLEIFERRSFFQL----LQKHDNDDR---LLALLLLNTFTPRAQLASALNLPETWVAE 110 GY LE + R QL L + L LLL + L + L + ++ + Sbjct: 61 GYLLEKVDYRRLLQLEENGLFAEQEERVKYILKRLLLEKDYVRLEDLEADLYVSKSTLHT 120 Query: 111 RLPRLKQRYER-TCCLASRPGLGHFIDETEEK-RVILLANLL--------RKDPF----- 155 L ++++ ++ LA+RP G ++ E K R+ L ++ + PF Sbjct: 121 DLKKVRKILKKYDLTLANRPHYGTKVEGGEFKKRLCLADSIFGWQNKPGQQNTPFNQDLF 180 Query: 156 ------LIPLAGITRDNLQ---------HLSTACD--NQHRWPLMQGDYLSSLILAIYAL 198 LI + R H++ AC + + Sbjct: 181 QKVKQILIRIISKYRIRFSDIELQNLATHITLACKRIEDGFTIEPLPFHFKESYTFERKV 240 Query: 199 RNQLTDEW-----PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA--DN 251 ++T E +P EI I+ V L + +H QV D Sbjct: 241 AKEITGEVEKSVGIPFPPAEIDYIL-----------VHLLGTKLISKHVARQVSDEIDDI 289 Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 V +L + + D + +T HL L + R +N +K +P AF+ Sbjct: 290 VNAILHELKTQFRWDFSNDKEFRNGLTLHLHTSLNRMKYKMHIRNPLLNEMKTKFPIAFE 349 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAI 368 ++ + + + + + + ++ A ALER + +++ +++ + A I + Sbjct: 350 GAVAAGECIEAVIHKKVNEDEISYLAIHIAIALERMRKKKRVLVVCATGLGSAKILSYQL 409 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 E N + I ++S ++ + +I ++ + D + V + + I Sbjct: 410 ENRFANE-MEIVDTISYYTLSDYDLSRVDLIVSTIMIPDHLEVPVVVVSHFLEENDAIHI 468 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 + + R + S + + +S + + + +C +LV QH + + A ++ Sbjct: 469 QREIG----RLKGNVQKYMAPSKIFIHQELDSKEKVIQFLCKKLVEQHAVPENYATLVLK 524 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVN-NEVINHVLIACAAADARHE 547 RE N +A+PH R TLA+P++ + ++ + V + + + Sbjct: 525 REAIASTAFGNLVAVPHPLEPVTHRTFWTICTLARPIQWDEDKKVQLVCLLNVGKEGGNL 584 Query: 548 LKIFSYLASILCQHPAEI-IAGLTGYEAFMELLHKG 582 ++ YL I+ A I E ++ + G Sbjct: 585 NAMYKYLTGIVQNKAAVQKIIKSNTVEELIQCMEAG 620 >UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Bacillaceae RepID=C1PAW0_BACCO Length = 639 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 118/648 (18%), Positives = 230/648 (35%), Gaps = 81/648 (12%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYL-NFTLNGKARIFASGSA 57 +L++RQ I+ LL + P T +A++ GVS RTI +I + N T + +I ++ Sbjct: 3 ILSKRQKDILILLSKSKEPVTASWMAKELGVSDRTIRNEIKLMQNNTASHGFQIESTRGL 62 Query: 58 GYQLEIFERRSFFQLLQK------------HDNDDRLL----ALLLLNTFTPRAQLASAL 101 GY +++ + F ++L + D D R+L LLL F + Sbjct: 63 GYSVKVLDAGLFSKILNEISTEEHHLAGDFTDKDTRVLYILRRLLLETDFIKIESFIDEM 122 Query: 102 NLPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETE-EKRVILLANLLRK------- 152 + + + L +K+ ++ L +RP G ++ E KR+ L LL + Sbjct: 123 FVSLSTLQNDLKMVKEILDQYHLKLINRPHYGSKVEGDEYMKRLCLSNLLLERNQEAFLK 182 Query: 153 -------DPFLIPLAGIT-----------------RDNLQHLSTACD--NQHRWPLMQGD 186 DP L + H++ AC + D Sbjct: 183 EDCLQLIDPELFKKIKEVIVQKVNKYKIEISDISLENLATHIAIACRRIQEGFVIEELAD 242 Query: 187 YLSSLILAIYALRNQLTDEW-----PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH 241 L + N++ E +P EI I+ H L E Sbjct: 243 VLVDDHPFEKIVANEIIKEVEDFTSLTFPETEIDYIIVHLL-------GTKLLHKKELAE 295 Query: 242 QQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 + + +L R+ + + D + ++ +T H+ + + R +N+ Sbjct: 296 FSKFDEAGTIINCMLARLKAELNWDFRQDREFIQALTLHIRPAMNRLRYKMNIRNPLLND 355 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQN 358 +K +PAAF+ ++ + E L + + + + I L+ ALER + ++ I + Sbjct: 356 IKKKYPAAFEGAIIASKCIEEYLRMEVVEDEIAYIALHIGVALERMKLNKKKIKKVLIVC 415 Query: 359 AIATINQLAIERDVLNC---RVIIARSLSELVAIREEIE-PLLIINNSHYLLDDAVNNYI 414 A + + + N + IA +++ ++ LII+ D V + Sbjct: 416 ASGVGSAKLLSYRLQNLYGQEIEIADTINYYNLSSYDLSFIDLIISTVPIKEDFGVPVQV 475 Query: 415 TVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVA 474 V + I+ I FL+ Q + P S + + + + + R +C +L Sbjct: 476 -VNTFLEDKDIQAINGFLSRT---QNVAEKYLHP-SRIFLQLALQDKESVIRFLCDELYK 530 Query: 475 QHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI-- 532 Q + D ++ RE N +AIPH + TL P+ + + + Sbjct: 531 QKLVPKDYVNLVLERESITPTCFGNLVAIPHPMVPVTKETFWTVCTLKSPIHWHEQQMVQ 590 Query: 533 NHVLIACAAADARHELKIFSYLASILCQHPAEI-IAGLTGYEAFMELL 579 L+ ++ L SI+ + + M + Sbjct: 591 FVCLLNIKEGTQTDLDDMYKKLISIIENRSVVQKVIKSKTADELMAFI 638 >UniRef50_UPI000196A9D7 hypothetical protein CATMIT_00535 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196A9D7 Length = 624 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 105/626 (16%), Positives = 217/626 (34%), Gaps = 52/626 (8%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +N RQ +I+D+L T ELA VS RTI DI+++N I A+ GY Sbjct: 1 MNNRQQRIIDILYDYDEWVTGKELASMLSVSDRTIRSDIEHINKEYEC-TLIEANRRKGY 59 Query: 60 QL----EIFERRSFFQLLQKHDNDDR--LLALLLLNTFTPRAQLASALNLPETWVAERLP 113 L + + ++ + + ++ LL +L + + + L Sbjct: 60 HLDEMLTSVKGITTKSVIPQTSQERVSWIIKELLFKQEINLIELQDRIYVSGYTIDNDLR 119 Query: 114 RLKQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLLR-----------------KDPF 155 +++ L R ++ E ++ + +LL KD Sbjct: 120 NIRRILNEYPSLKVVRVKNHIRLEGNENEKRSVYKHLLESEIKGNFTNISALSHLWKDFN 179 Query: 156 LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLS------SLILAIYALRNQLTDEWPQY 209 LI + I ++ + N LM ++ L D + Sbjct: 180 LIDVVEIFKNVCANNHYKFKNVSLPMLMMHAGIAIERIRNKNYLYETQSDCTGIDLEYRV 239 Query: 210 PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ--HQQAQVISADNVQGLLQRVPGIASLNI 267 D +++ + G+ + V L+E + H + S V+ +L + ++ Sbjct: 240 SKDFFEELSQKLGIPYVEEEVVKFAFLLEGRGSHVDLKAESQQLVEEVLLDIKDCFDIDF 299 Query: 268 ID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIP 326 D +L ++ H+ L + + + +K +P F+M++H ++ + P Sbjct: 300 RDDEELYNSLVIHMQSLLDRIKVDKPNTTAYLKEIKRQYPLVFEMAIHASDVISKATGKP 359 Query: 327 LFDSD--LIGLYFACALERH--QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARS 382 L + + + L+F A ERH + + ++++ +A IE R+ I + Sbjct: 360 LVEDEISYLALHFGTAYERHIDTQKYRVVMIIPHNQMLAKACMDKIETR-FRERMEIIKV 418 Query: 383 LSELVAIRE-EIEPLLIINN---SHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIR 438 + P LI+ H L V+ + V + + + + Sbjct: 419 FPFFENNMIASLHPDLILTVVPLQHELSIKTVSISLFVNYEDESQIFQALNQLDREKYHD 478 Query: 439 Q---QPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 Q ++ F ++ S + +C L+ + T + + + RE Sbjct: 479 QFCHIVKKLIGQETFFIKKDIA--SKEDAINYLCDNLIQLGYATQEYKEDVFKREEMAGT 536 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLA 555 V A+PH + Q R + L PV+ + +L+ + L F Sbjct: 537 AFVQGFAVPHAITVQPLRSTISVMVLKNPVKWGKYEVRLILLLSISEQDNQMLHTFFDWL 596 Query: 556 SILCQHPAEIIA--GLTGYEAFMELL 579 S + +++ Y+ FM+L+ Sbjct: 597 SNVLIDYNQLMQFIEADNYQQFMKLM 622 >UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D786_9CLOT Length = 673 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 110/631 (17%), Positives = 223/631 (35%), Gaps = 76/631 (12%) Query: 19 TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAGYQLEIFERRSFFQLLQK-- 75 T LA + VS +TI I N +G S GY L+I ++ +F L++ Sbjct: 44 TAEALAGKLKVSTKTIRNYIKEWNDWFDGYGAQIRSKHGCGYFLDIADQEAFDSRLKQLT 103 Query: 76 -------------HDNDDRLLALLLLN-TFTPRAQLASALNLPETWVAERLPRLKQRYE- 120 + + LL LL + L+ L + ++ L +++ E Sbjct: 104 ARTHTSGQVPSTSEERVEYLLNDLLSRRDYVTIDALSDILYISRKTISADLKEVEKILEA 163 Query: 121 RTCCLASRPGLGHFIDETEE-KRVILLANLLRKDPF----------------------LI 157 + LA RP G I+ TE +R+ + ++ K+ +I Sbjct: 164 YSLKLAKRPNYGIRIEGTEFNRRLCIANIIIGKESEALAEGEAEHQENMTRVARCVAEVI 223 Query: 158 PLAGITRDNLQ------HLSTACDNQHRWPLMQGDYLSSLIL---AIYALRNQLTDEWPQ 208 T +++ H+ A + D + Y + ++T+ Q Sbjct: 224 DTENFTVNSVAYQNLIVHICIAVQRIQENCYVPLDEERQERIRRSKEYRIAQKITERLNQ 283 Query: 209 -----YPGDEIKQIVEH---SGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVP 260 +P EI I H RT E Q + + V +L V Sbjct: 284 SFAIRFPDQEIAYIAIHLAGKQSLFLPEQERT----GEAGGQVISEETWEVVSQMLDAVY 339 Query: 261 GIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 + D +L N+ H++ + + + + ++KA +P A+ ++LH ++L Sbjct: 340 EAFLFDFRSDLELRMNLAQHIVPLAVRLQYNMKLKNPLLKDIKARFPMAYAIALHSSSIL 399 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSDQNAIATINQLAIERDVLN 374 E+ L D + + L FA A+ER ++ +I+ + A + ++ + Sbjct: 400 TERYGHELKDDEVGYLALAFALAIERQNTELPKKNILIVCASGKGSAQLLHYRYRQEFGS 459 Query: 375 C--RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 R+ + ++I+ + + V VK + +A I+ +K L Sbjct: 460 YVGRIETCDVSNVKKVDFKDIDYVFTTVPIQEKVPVPVQ---EVKYFLESADIQNMKKVL 516 Query: 433 ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGE 492 P +S+++ ++ +++ +C Q++A +T + ++ RE Sbjct: 517 RRKGGDDVP-LMAYFDEELFFSHLKFDNPHDVSKFLCHQVMAVKGLTDQFWKLVVKREKA 575 Query: 493 GENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFS 552 N +A+PH W L +P+ ++ + + + + L+ F Sbjct: 576 ARTAFGNLVAMPHPWKAISEETFVCVGILDEPIRWGDQDVQVIFLVSISNRKNKNLQAFY 635 Query: 553 YLASILCQHPAEI--IAGLTGYEAFMELLHK 581 + + I + YE ELL K Sbjct: 636 QGMTKMLTDADAIGRLIRAQTYETLTELLEK 666 >UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 Tax=Bacillus cereus group RepID=A0RA54_BACAH Length = 651 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 113/635 (17%), Positives = 226/635 (35%), Gaps = 78/635 (12%) Query: 14 EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQLEIFERRSFFQL 72 E+ LA + VS +TI +DI LN L S GY+LEI + + F + Sbjct: 23 EKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQRGTGYELEIIQTKKFEEF 82 Query: 73 ---LQKHDNDDR-----------LLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQR 118 L + + L +L + +QLA + + ++ V + + Sbjct: 83 CVSLFQKQTEKVPTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKSTVNLIMKDVTDI 142 Query: 119 YER-TCCLASRPGLGHFIDETE-----------EKRVI---------------------L 145 R + RP G I E R L Sbjct: 143 CGRYQLQIEKRPYYGIRIVGEEFHIRSCLSQYGLPRYDHTPFHERFEQNDTYVSLPHIPL 202 Query: 146 LANLLRKDPF--LIPLAGITRDNLQ-HLSTA---CDNQHRWPLMQGDYLSSLILAIYALR 199 + +++ K I L+ I DNL H++ A C++QH + + +I Y + Sbjct: 203 IRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKGLNAEQSELIIKKEYTIA 262 Query: 200 NQLTDEW-----PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG 254 Q+ E +P +E+ + H L AV + + + + A Sbjct: 263 KQIVGELEKELHLSFPKEEVLYVTMH----LLSTAVTSKDRYENVEELLGKDLYAFMQHI 318 Query: 255 LLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 L + + D +L+ HL L + R + +K +P AF++++ Sbjct: 319 LFKVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVKKNYPYAFEIAVL 378 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP---IILLSDQNAIATINQLAIE 369 ++ E + +S+ I ++F A+ R Q + Q +++ + A + + I Sbjct: 379 VGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQNQKKRCLLVCATGQGSAQLLKYKIL 438 Query: 370 RDVLNCRVIIARSLSELVAIREEI---EPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 ++ I E++ + II+ H V I V +I I+ Sbjct: 439 SQ-FRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLPVP-VIKVNSIFDDKEIK 496 Query: 427 QIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 I L T + + N + + + + +C + ++++ + + + Sbjct: 497 SIGQQLFTHVNNSVQQYM---KEDLIFLNHSASTKEEVIQFLCEKATEKNYVPENFYESV 553 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARH 546 + RE + N +AIPH + F TL + V+ ++ + +++ + Sbjct: 554 MERESTSPTAVGNLVAIPHPMQLLSEKTFLMFCTLNKAVDWGDKKVQVIILFSVKRNNNE 613 Query: 547 ELK-IFSYLASILCQH-PAEIIAGLTGYEAFMELL 579 +L+ ++ +L I+ E +A E F E+L Sbjct: 614 DLQKLYDFLYDIMSNQNTIEKLAQAKVVEDFQEIL 648 >UniRef50_A0AFK2 Complete genome n=18 Tax=Listeria RepID=A0AFK2_LISW6 Length = 644 Score = 185 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 107/624 (17%), Positives = 221/624 (35%), Gaps = 73/624 (11%) Query: 18 RTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAGYQLEIFERRSFFQLLQKH 76 + +L+Q+ +S RTI DI L L I + AGY++EI + +F + Sbjct: 23 LSAQKLSQELHISERTIRTDIAKLTEFLENHGATITLTRGAGYKIEILDPAAFQAFQNEK 82 Query: 77 DNDD----------------RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE 120 + + LL + LA + ++ + ++++ Sbjct: 83 NKPKNADYFDLDNPEERVKYEIFLLLSSADYIKLEDLADTIYASRATISNDMKQVRKVIA 142 Query: 121 R-TCCLASRPGLGHFIDETEEK-RVILLANLLRKDP----------------FLIPLAGI 162 L S+PG G I EEK R L A + K L L Sbjct: 143 SYDLTLVSKPGSGVKIVGEEEKMRYTLTALIASKKAPESYLETFFEWHKQKDKLQKLMSA 202 Query: 163 TRDN----------------LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW 206 D L H+ + ++ L+ + + N+L Sbjct: 203 VTDYFFATNIRFTDEALQNLLLHMMILVERIELGHSLEQFELTDVSEEEIVIANKLAT-I 261 Query: 207 PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLN 266 + + + + L L + R L + + ++ ++G+L R+ S + Sbjct: 262 LESLFEITISSADKNYLLLQIASKRILNV---EDKEISEFDDYAYIEGMLNRIESHYSYH 318 Query: 267 IIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ--L 323 + D QL +++ H+ L + + ++K +P A++++L + L++ Sbjct: 319 LQDDLQLKKDLIAHIHSMLYRVKYHMTVKNPMTEHIKRYYPLAYEITLDAVESLKKDYPY 378 Query: 324 DIPLFDSDLIGLYFACALERHQN-----ERQPIILLSDQNAIATINQLAIERDVLNCRVI 378 DI + + L+ +LER+ + +I+ A I + ++ V N + Sbjct: 379 DINQNELAYLALHIGASLERNYQISYYRHKSALIVCGSGFGTARIVEAKVKSAVSNLDIT 438 Query: 379 IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAF-- 436 S+ E E +++ + V I + NI T ++ + + Sbjct: 439 KVVSIQEYNRFIHIEEDIILSTVRIPEKNKPV---IKISNIPTNEELKMLGAIIQEQTDS 495 Query: 437 IRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENL 496 R FF+A ++ S I +++ + L + D ++ RE G + Sbjct: 496 NRGFLSNFFTAE---FFARSELTSKSAILKEMVSSLYKNDIVGTDFLGSVLEREKLGSTV 552 Query: 497 IVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV--LIACAAADARHELKIFSYL 554 + +AIPH + + L +P++ + + H L+ + D + I+ L Sbjct: 553 LGTGIAIPHPLGLMAKETKIVIRILDKPIKWDQKQSVHAVFLLCISKHDYEEAINIYELL 612 Query: 555 ASILCQHPAEIIAGLTGYEAFMEL 578 ++ + E +A LT + F L Sbjct: 613 VELVREEYGEKLANLTNFREFTTL 636 >UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFG3_9BACI Length = 645 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 115/635 (18%), Positives = 221/635 (34%), Gaps = 64/635 (10%) Query: 7 LKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNG--KARIFASGSAGYQLEIF 64 L+I+ L E+ +L+ Q G +T+ D+D + L + G +EI Sbjct: 14 LRILLLHEEGALQIKDLSGQLGCVEKTVRNDLDRIEDYLGQYEGTNLIRKPGVGIFIEID 73 Query: 65 ERRSFFQLLQKHDNDDRLL---------ALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 E L +D + + LL A +P + + L + Sbjct: 74 EAARSEILQSLFSDDSKTMEERLFEMAFQLLTSGNAITLKYWAERYFVPNASLKKDLEVI 133 Query: 116 KQRYERT-CCLASRPGLGHFIDETEEKRVILLANL--------LRKDPFLIPLAGITRDN 166 Q ER L SR LGH I+ TE + LA+L + K+P ++ L + Sbjct: 134 AQWLERFDLLLVSRQRLGHLIEGTELNKRNALAHLSGLIPSGGIGKNP-VLDLFQPYEID 192 Query: 167 LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPG-DEIKQIVEHSGLFL 225 + + + + L SL++ + + P + E+++I Sbjct: 193 IVRKALKEIQNNESIRFTDEALDSLVVHALIMIKRTRQRAPVFVEPAEMEKIALRKEYEY 252 Query: 226 GDNAVRTLT-----------------GLIEKQHQ-------QAQVISADNVQGLLQRVPG 261 L I + + VQ L++R+ Sbjct: 253 ASAFFTRLADSFQLSFPEAEIVYYTWHFISAKRSEEAESALIQDEKAEHVVQLLIERMEK 312 Query: 262 IASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 + D L + H+ ++ + + N+K +P F M + + +R Sbjct: 313 LTLFPFGNDHILASGLAVHMHSVISRIHYGFPITNPLLANIKRMYPYMFSMVILALDDIR 372 Query: 321 EQLDIPLFDSD--LIGLYFACALERHQNER-----QPIILLSDQNAIATINQLAIERDVL 373 E I + + + I L+F ++ER + +R + II+ ++ + + IE+ Sbjct: 373 EGFHISIPEDEAAYIVLHFQASIERLEGKRNIEKKRAIIVCHMGIGMSHLLEAKIEQQYA 432 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF-- 431 + +E+ E+ P II+ + A YI + + E++ F Sbjct: 433 AIEIAACIGKAEVAEALEKHHPDFIISTVPL--EKAGTGYIQISPLFGQEDKERLSQFVD 490 Query: 432 -LATAFIRQQPERFFSA-PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 L T + E F + +V+ E + + L + + + + R Sbjct: 491 NLRTGKTEGREESFADLMEEDLIFLHVKKEHRYEVVEMLAMALYQKGYAAKEFIHSTVNR 550 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV-LIACAAADARHEL 548 E I ++IPH R L QP+E +E ++ V L+A A + R Sbjct: 551 ERNSATAIGGGISIPHGDPSMISRTAIAAAILDQPLEWGSEKVSLVFLLAVAKENQRDIR 610 Query: 549 KIFSYLASILCQHPAE--IIAGLTGYEAFMELLHK 581 +I +AS L + PA + F+++L + Sbjct: 611 RIIGKIAS-LSESPAAVHELVSAGNAAEFLKMLKQ 644 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 93/285 (32%), Gaps = 16/285 (5%) Query: 77 DNDDRLLALLLLNT--FTPRAQLASALNLPETWVAERLPRLKQ---RYERTCCLASRPGL 131 + LL +LLL+ L+ L E V L R++ +YE T + +PG+ Sbjct: 8 NRQKELLRILLLHEEGALQIKDLSGQLGCVEKTVRNDLDRIEDYLGQYEGTNLIR-KPGV 66 Query: 132 GHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSL 191 G FI+ E R +L +L D + S W +SL Sbjct: 67 GIFIEIDEAARSEILQSLFSDDSKTMEERLFEMAFQLLTSGNAITLKYWAERYFVPNASL 126 Query: 192 ILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH-------QQA 244 + + L + + NA+ L+GLI Sbjct: 127 KKDLEVIAQWLERFDLLLVSRQRLGHLIEGTELNKRNALAHLSGLIPSGGIGKNPVLDLF 186 Query: 245 QVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAA 304 Q D V+ L+ + S+ D L ++ H L + A K A Sbjct: 187 QPYEIDIVRKALKEIQNNESIRFTDEALD-SLVVHALIMIKRTRQRAPVFVEPAEMEKIA 245 Query: 305 WPAAFDMSLHFITLLREQLDIPLFDSDLI--GLYFACALERHQNE 347 ++ + F T L + + +++++ +F A + E Sbjct: 246 LRKEYEYASAFFTRLADSFQLSFPEAEIVYYTWHFISAKRSEEAE 290 >UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan operon n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMS7_OCEIH Length = 648 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 98/638 (15%), Positives = 218/638 (34%), Gaps = 77/638 (12%) Query: 15 QQPRTPGELAQQTGVSGRTILRDIDYLNFTLN-GKARIFASGSAGYQLEIFERRSFFQLL 73 + P T +A V+ RT DI LN + A I + GYQL I +F + L Sbjct: 16 KAPLTSTFIANINQVTSRTTRDDIKKLNQHIQLHGAVIQSIKGKGYQLSIQNEDTFHRFL 75 Query: 74 QKHDNDD----------------RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQ 117 N+D + LL + QLA + + ++ + + ++Q Sbjct: 76 TMEWNEDMDSRKTPNTPEQRVKYIVRRLLFTMDYIKLEQLADEMYISKSTIQNDMKLVRQ 135 Query: 118 RYERT-CCLASRPGLG----------------HFIDETEEKRVILLANLLR---KDPFLI 157 + + +P G F+D + + D + Sbjct: 136 QLNPFELDIHVKPSHGIKIIGEEIKIRFCMAEFFVDRENHSHADVKTHCEFVTLPDQQMS 195 Query: 158 PLAGITRDNLQ----------------HLSTAC-----------DNQHRWPLMQGDYLSS 190 + I L H++ A + HR + + Sbjct: 196 MIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFNAAHREEMQDMKDTKA 255 Query: 191 LILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD 250 +A + + +P E + H LG V + Sbjct: 256 YFVAEKIVEDTEKQLHLSFPKTETTYVALH---LLGTKMVGSTNIDSTDIESILDPSIYK 312 Query: 251 NVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 + L+++ L I D +L+ ++ HL + + R + ++K +P AF Sbjct: 313 LIMLSLEKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPMLTHIKKNYPLAF 372 Query: 310 DMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLA 367 +++ ++ E+ DI + +++ + L+ A+ER++ + P L + QL Sbjct: 373 QAAVYAGVVIEEKTDITIDENEIGYLALHIGAAMERNKLRKGPKRCLVVCASGMGTAQLI 432 Query: 368 --IERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI 425 + ++ + + ++ + +I +S + +D I V II + Sbjct: 433 YYKLKSKFEGQMEVVGTTEYYRLRDYPLDDIDLIISSIPIKEDLCIPVIEVNAIIEEEDL 492 Query: 426 EQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR 485 + I+ F++ + + + + N+ S Q + + A ++ + D Sbjct: 493 QHIQSFISGK--KTNLLSQYLHESN-IFLNLEASSKQDVLEHMTAHVIENEFVDTDLLDS 549 Query: 486 IIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADAR 545 I RE N +AIPH + + + TL +P+ +++ + + + +++ Sbjct: 550 IYEREKIAPTAFGNLVAIPHPLTPKSDQTFISIATLREPIIWSDKTVQFICLLSVKRNSQ 609 Query: 546 HELKIFSYLASILCQHPA--EIIAGLTGYEAFMELLHK 581 +L+ + P+ + + AF+E++ + Sbjct: 610 EDLQSLYETLGKIIDRPSIIQKLVKAKDKNAFIEIIEQ 647 >UniRef50_C2BXP0 Transcription antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BXP0_LISGR Length = 637 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 101/633 (15%), Positives = 227/633 (35%), Gaps = 66/633 (10%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA 57 MLNE+Q ++ LE+ T ELA + RTI + +N L GK + + Sbjct: 3 MLNEKQKDLLTFLEKHKDSWITSKELAAYCECTTRTIRNRVASINAELPGK---ITASTY 59 Query: 58 GYQLEIFERRSFFQLLQKHDNDDRLLALLL--LNTFTPRAQLASALNLPETWVAERLPRL 115 GY+L + Q L ++D R+L LL +LA L + E+ + + ++ Sbjct: 60 GYRLNTEIKAIGEQPL-RNDRKSRILLELLKKSADGIDIYELADNLFISESTLKADIQQM 118 Query: 116 KQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTAC 174 K+ + + + + KR +++ L + L + + ++S A Sbjct: 119 KKEFTAKNIQIIFEKDTVKLVGTERAKRRYMISLLYDESNLQEKLKASIQQMIGYISLAA 178 Query: 175 DNQHRWPLMQGDYLSSLILA--------------------------------------IY 196 + + G + Sbjct: 179 LQEMIRMVFAGHEIRINQYTLNNIVLHYAISIERIRQGHIIKKQTDNQDFQTKREYELAK 238 Query: 197 ALRNQLTDEW-PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGL 255 + ++L +E+ + E++Q+ LF+G + ++ + + + Sbjct: 239 EIADKLAEEYAIDFSEGELEQLAL---LFIGIQNETSANSKNKQLKEVVDEKIITALHDV 295 Query: 256 LQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 L++V + + D + + H+ + R SS+ +LK A+P +D+S++ Sbjct: 296 LKQVKKTYLIELGDDQEFFNKLAIHVQSLYHRSKYDTFARNSSLLDLKTAYPLIYDISVY 355 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDV 372 +L++E+L I + + I L+ L +N + LL N +++ + + Sbjct: 356 ISSLIQEKLAIWFNEDEISFIALHIGSFLGTQKNSIEQASLLLVANDYHDLSENIVAKLE 415 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 I + AI+ + +L+ + + + I ++ ++ + +I+ + Sbjct: 416 NTFGEQIFIKTANEAAIKAQSYDMLLTT--DHSIAERYERAIFIQPLLHQNDLRKIEKRI 473 Query: 433 -------ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR 485 + Q ++F A F+ ++ + + I +QI +L+ ++ D Q Sbjct: 474 YQIKEQKQKVKMHQYIDQFIPAELYFNQVDLAAATPKAIRKQINQRLLHNGYVGEDFLQS 533 Query: 486 IIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADAR 545 + RE + +AIPH + +TL +PV + + + D Sbjct: 534 VEKRESMSSTGFPSGIAIPHAIEISAVKSSVAVMTLQEPVMWEAYPVKLIAFVTISKDES 593 Query: 546 HELKIFSYLASILCQHPA--EIIAGLTGYEAFM 576 F + + ++ + Y F+ Sbjct: 594 KVFNDFFERFIEIVSDAVNTKQLSTSSSYAEFI 626 >UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=Thermoanaerobacter RepID=B0KCF7_THEP3 Length = 652 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 103/655 (15%), Positives = 221/655 (33%), Gaps = 91/655 (13%) Query: 5 RQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-------- 54 R L+I+++L +QP T +A VS +TI D+ + K Sbjct: 3 RILEIINMLLNSEQPLTVDYIANTLKVSNKTIRNDLKKAEEFVQQKGVKIIKKPRVGIVL 62 Query: 55 ---GSAGYQLEIFERRSF---FQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 + +L ++S + + L L + +LA L + + Sbjct: 63 EGPRNKKLELVDEIKKSLDFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSRVTI 122 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLR---------------- 151 + L +++ + L +P G + EE +A+L+ Sbjct: 123 HKDLQSVEKWLNKFNLKLLKKPNYGIEVVGDEENWRNAVASLIVSTKEQKELKEFLYNDY 182 Query: 152 ------------------KDPFLIPLAGITRDNLQ-------------HLSTACD--NQH 178 L + L+ H++ + + Sbjct: 183 TGRIDYRTLMQLRELFDIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLKHK 242 Query: 179 RWPLMQGDYLSSLILA-IYALRNQLTDE-----WPQYPGDEIKQIVEHS-GLFLGDNAVR 231 + + L++L Y + Q+ E P EI IV H G + N + Sbjct: 243 KDVKLSKAVLNNLKQKDEYVIAQQMAKEIEAKFNVVLPESEIGYIVLHIIGTKMQQNKIE 302 Query: 232 TLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWI 290 + +E + + + ++ SL++ D QL+ + HL + + Sbjct: 303 DVNLELEDEESIELAVIMS--KEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYG 360 Query: 291 AEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER 348 R +N++K +P + ++ + + L + + + I L+ A+ER + Sbjct: 361 LTLRNPLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAAVERAKKPL 420 Query: 349 QPIILLSDQNAIATINQLAIERDVLNCRVI-IARSLSELVAIREEIEPLLIINNSHYLLD 407 + +++ + A + +E+ + I S+S +I +I+ ++ Sbjct: 421 KALVVCTTGIGTAQLLAARLEKSFKQIEIKDIVSSVSLHESILNDIDIVISTVPIEIN-- 478 Query: 408 DAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQ 467 +I + ++T I+++ F+ R Y + + + Sbjct: 479 ---KPFINISPLLTQNDIKRLDEFIQALNKRSNLIDTQLLDVDGIYL-----KKEDLLNK 530 Query: 468 ICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV 527 +C +L + ++ + Q +I RE I N +AIPH E + + L P+ Sbjct: 531 VCMELHKKGYVKEEYIQDVITREKIASTAIGNGIAIPHGLPEHVNKSVFTVVRLKNPIAW 590 Query: 528 NNEVINHV-LIACAAADARHELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELLH 580 + E ++ + +I+ +D IF L + L E I E ++LL Sbjct: 591 DEEKVDMLFMISLTQSDIAKSRYIFRKLYNKLESPEFVENIKKAKSREEIIKLLE 645 >UniRef50_C0CTD3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTD3_9CLOT Length = 656 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 105/631 (16%), Positives = 222/631 (35%), Gaps = 71/631 (11%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAG 58 L ++Q+++++ L Q ELA++ G+S RT++R + L L I G Sbjct: 34 LTQKQIQLLNCLMHQENAIGADELAKRLGISARTVMRYLSVLAEELETFGVCISQKRGQG 93 Query: 59 YQLEIFERRSFFQLLQKHDNDD--------RLLALLLLNTFTPRAQLASALNLPETWVAE 110 Y LE +R + LL + + ++ ++ +L+ A+ L + + + Sbjct: 94 YVLE-GDRAALKPLLTQKEYRQKDGDKRIHEMILEIIDQDEITIEKLSEAMFLSPSTLNK 152 Query: 111 RLPRLKQRYER-TCCLASRPGLGHFID-------------------------------ET 138 P +K+ R L+ +P G I E Sbjct: 153 MTPDVKEFLGRYNLTLSGKPHYGLSITGGETEIRTLLGDIGLDYCNARLVNTGIYNISEE 212 Query: 139 EEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSS-----LIL 193 E RV L ++ LI + + + A + + G L++ Sbjct: 213 ELNRVDRLVFDRIQEYGLIVADMDLNNLIARIVVALSRSRKGRHVTGMSLTAPVTGHNYQ 272 Query: 194 AIYALRNQLTDEW-PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNV 252 I ++ L E + +E ++ +SG D V G E + D+ Sbjct: 273 MILSIMETLGQELDIEITEEECLYVMVYSGFIGYDLNVADAEGCREMRRFV------DDF 326 Query: 253 QGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 + R+ GI D +++ ++ HL + + +K +P + + Sbjct: 327 LDEISRLTGINY--DRDEKVMNVLSLHLKALMQRARAGNYSPNPIIAQIKNRYPLEMNYA 384 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIER 370 + E+ + + + + + +Y + + +IL + + + I+ Sbjct: 385 ILMAQRFEERFGVSINEDEIGYLTVYLGVYEPQAGERVKAVILCNYGIGTSQMILEKIQS 444 Query: 371 DVLNCRVIIARSLSEL-VAIREEIEPLLIINN-SHYLLDDAVNNYITVKNIITAAGIEQI 428 ++ N + + L +A+ + + +L +Y D V I ++++ I I Sbjct: 445 EIQNILICGVYPVRYLDLALDRKPDVILSAVPVENYGGDVPV---IVSHDLLSEKAIAGI 501 Query: 429 -KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 + +I ++ R+F + ++ ++ LV + I + I Sbjct: 502 QEQLWQKIYIEKELMRYFDPDC---FGHIDAADRFQAIEKLGGLLVEKKGIGREVVDAIG 558 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE 547 RE + N +A+PH ++ L P++ NE + V +AC Sbjct: 559 KRERISSTEVGNLVAVPHVLTQGTFSSCIAIGILNHPIQWGNERVQMVFLACFNQSRDQY 618 Query: 548 LKIFSYLASILCQHPAEIIAGLTGYEAFMEL 578 +IF L ++ H E++ L E F E Sbjct: 619 ARIFRTLYKVV--HSDELVRRLIQAENFQEF 647 >UniRef50_C6CCS2 PTS modulated transcriptional regulator, MtlR family n=79 Tax=Enterobacteriaceae RepID=C6CCS2_DICDC Length = 641 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 102/637 (16%), Positives = 213/637 (33%), Gaps = 75/637 (11%) Query: 3 NERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAGYQL 61 N R ++ DLL+ +P ELA++ VS RT+ DI +N L A + S GYQL Sbjct: 5 NPRLAQLFDLLKNEPLPQDELARRLAVSTRTVRTDISQINELLAEHGAHLVLSRGVGYQL 64 Query: 62 EIFERRSF-------------FQLLQKHDNDDRLLALLLLNTF-TPRAQLASALNLPETW 107 +I + + + + LL L + F +A + Sbjct: 65 QIQDAQRYACWEATQTAAMPTRVPRTSTERVQSLLVRFLTSAFAFKLEDVAERWFVSRPT 124 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLLR------KDPFLIPL 159 + + +++ R + +RP G + +E R L + + + +P Sbjct: 125 LQSDMAEVREVLGRYHLSIETRPRYGMKLLGSEVSIRTCLTDLVYQMVQDDGGEAPTLPS 184 Query: 160 AGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT----------DEWPQY 209 + R+ L L H G ++ L + ++ Sbjct: 185 TALDRETLSRLQVIL---HDVFSRSGIRMTDEAECYLGLYCAVAIRRIGEGYPLSDFTAE 241 Query: 210 PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQV--------------ISADN---- 251 D+ + H + + E+ + + + IS D+ Sbjct: 242 DVDDDVREAAHQLISVMRAMTGKAISASEEAYLRVNLAARRIQELSGNASAISPDDGESL 301 Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 V +L + + N+ D QL ++ H+ + + + N+K +P A+D Sbjct: 302 VDYILSYINTHYNFNLQNDPQLRADLLTHIKTMITRVRYQITIPNPLLTNIKQHYPMAYD 361 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERH-----QNERQPIILLSDQNAIATI 363 ++L ++ + + +++ + L+ LERH Q Q +++ N+ + Sbjct: 362 VTLAAVSSWSKYTPYVISENEVGFLVLHIGVGLERHYDVGYQRHPQVLLVCDTGNSTIRM 421 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 Q + R V SL + + E E +I V T Sbjct: 422 IQAMLWRRYPQMVVNNIISLRDYRTLPEVEEDFVISTTRLAEKGKPVLVMSPFP---TDY 478 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQ----HITRQICAQLVAQHHIT 479 +EQ+ + R + F + + R +C QL + + Sbjct: 479 QLEQLGKLVLVDRTRP-----YMLEKFFDRQHFCIIDQPMDQATLFRTLCGQLEREGRVD 533 Query: 480 ADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV-LIA 538 D ++ RE ++ +A+PH R F + Q + +E + L+A Sbjct: 534 GDFHASVVEREAIVSTMLGEGIALPHSLGLMARETVVFTVLAPQGIPWGDETAYAIFLLA 593 Query: 539 CAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAF 575 + ++ + I+ + + + + +++F Sbjct: 594 ISKSEYEEAMAIYDLFVTFMRERAMARLRECPDFDSF 630 >UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MET8_9FIRM Length = 671 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 103/646 (15%), Positives = 220/646 (34%), Gaps = 70/646 (10%) Query: 3 NERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAGY 59 N+R +KI+ + T +A GVS RT+ DI LN L + S GY Sbjct: 13 NKRLIKILRFFLENEKWITGASIALSVGVSTRTVRNDIKELNQMLADRGAEITSEIGQGY 72 Query: 60 QLEIFERRSFFQLLQK---------------HDNDDR--------LLALLLLNTFTPRAQ 96 +L + + R F L ++ D+++R LL L Sbjct: 73 KLTVSDSRKFDLLKKEIRKEESSKPFQNIIPSDSEERVHYIISRLLLNSLNSGERIDFFD 132 Query: 97 LASALNLPETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEK-RVILLANLLRKDP 154 L L + + + + L + + + G + E K R + + Sbjct: 133 LEEELFVSTSTLKKDLRTIDGILKKHDLRIRDTKKEGMRVAGQETKIRFCISEYIFNSQK 192 Query: 155 FLIPLAGI------TRDNLQHLSTACDNQHRWPLMQGDYL--------SSLILAIYALRN 200 + + D +++L ++ + S ++L + + Sbjct: 193 DTGDIGNKFYKDMFSSDEVENLRIILMEAITDFNLRLTDIAFRNLLVHSLIMLKRFEKKR 252 Query: 201 QL------------TDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS 248 + T E+ I +I G+ LGD LI Q + + Sbjct: 253 HVKYDEEEIELFSGTKEFRC-AQQIITEISGKLGISLGDEVYYLTQHLISSQRFLIENLD 311 Query: 249 AD-----NVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 D ++ +L + +++ D QL+ + HL L + R ++++K Sbjct: 312 GDYEYKEEIEDILNTIRSGTGIDLSDDNQLINGLAMHLSAALQRLRFDMNIRNEFLDSIK 371 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER----HQNERQPIILLSD 356 +P AF++++ ++ ++ + +S+ + ++F ALER + E + ++L+ Sbjct: 372 NLYPLAFELAVVAGEVIEKKHKLKAKESEIGFLAMHFGAALERKGLNRKQEPKKVVLVCI 431 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 + + + I +S E I+ ++ + L D + Sbjct: 432 AGIATALLLKEKLQHKFGQYIEIVKSCPVQDVDEELIDGADLVLTTVELPDFQSEKIKKI 491 Query: 417 KNIITAAGIEQIKHFLATAFIR-QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 K + + + + + + + + ++++ + Q I + +V + Sbjct: 492 KLFLDDDDLNHLATVITDSGNQMKVIDYSSIFREDLFFTDMEFKDKQEILEFMTDAMVEK 551 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 +I + Q I RE + + +AIPH + + L +PV NE + V Sbjct: 552 GYINQEIKQSIFKREEMSTTELGSLVAIPHALFNDMQEAAVSVMVLKKPVIWENEKVQVV 611 Query: 536 LIACAAADARHELK-IFSYLASILC-QHPAEIIAGLTGYEAFMELL 579 L+ + +F L L + Y F++ L Sbjct: 612 LMLNIPQSKYDVWEVVFKNLYQFLIGNSGVAKLVRHPCYGQFIKDL 657 >UniRef50_C9XML5 Transcriptional antiterminator n=4 Tax=Clostridium difficile RepID=C9XML5_CLODC Length = 629 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 111/639 (17%), Positives = 231/639 (36%), Gaps = 72/639 (11%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSA 57 M+ ++ IV L + T ELA + VS +TI R I LN L+ + AS Sbjct: 1 MITKKHAIIVKSLSNKDGYMTSNELAIKLDVSTKTIKRYIADLNSVLSKYDLVIASSRGI 60 Query: 58 GYQLE---------IFERRSF-FQLLQKHDND--DRLLALLLLNTFTPRAQLASALNLPE 105 GY+L + E + L + ++ +L+ + +A LNL Sbjct: 61 GYKLSGSKNNIARAVKEANKYIDGFLDDSEESRMSNIICMLINRNYMSIEAMAEELNLSI 120 Query: 106 TWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEE----------------KRVILLAN 148 + + +LK++ E+ + S+P G +I E +V + + Sbjct: 121 AAINKLSSKLKRKLEKYDLVIKSKPYYGSYIHGEEINIRQLITDYAIKLDEKSKVKVFLD 180 Query: 149 LLRKD----------PFLIPLAGITRDN-----LQHLSTACDNQHR-----WPLMQGDYL 188 + ++ L I D L + + R LM Y Sbjct: 181 DISENDIYCIESILEKHLREKDTIISDKDFNLLLSKIIVSVFRSKRGHSNNINLMDTSYR 240 Query: 189 SSLILAIYALRNQLTDEW-PQYPGDEIKQIVEHSGLFLG-DNAVRTLTGLIEKQHQQAQV 246 I L +++D+ + DE+ I +SG+ R T IE++ Sbjct: 241 FHNYYFIENLMKEISDKIGFKLIEDEVIYISNYSGVIAYKGTQGRKNTSEIEER---ISS 297 Query: 247 ISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 + + +Q + + D + + I+ H+ R L + ++ +K +P Sbjct: 298 VISSALQDIFLISGSDYT---KDDEFMVAISDHIKRFLNRARANVKSNNPLLHQIKEKFP 354 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ--NERQPIILLSDQNAIAT 362 AF++++ L + ++ L + + I ++FA + ER + ++ I+ Sbjct: 355 IAFNLAVFLSNKLETEFNLKLDEDELGYIAIHFAASNERMKKNTSKKICIVCHYGIGTGQ 414 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + +++++ + V+ + L + L++ + V + ++NI Sbjct: 415 LISEKLKQNISDLSVVGVYPVRYLDMAISQDVDLIVSTVELKGYEKPV---LYIENIFDD 471 Query: 423 AGIEQIKH-FLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 + IE + F R+ F F +++ + + + + +L + I Sbjct: 472 SLIENVNKAFYEKEERRKIISNMFDEKAFF---SIKASTKEEVIISLSNKLKERDFIEES 528 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA 541 + II RE I N +AIPH + +++ L P+ + + + V + Sbjct: 529 SIKSIIDRENISSTEIGNLVAIPHTIVKGDKKSIIGVGILENPIIWDKQEVQLVFMVFFN 588 Query: 542 ADARHELKIFSYLASILCQHPAEI-IAGLTGYEAFMELL 579 +H IF YL + + I + + M L+ Sbjct: 589 TKEKHNFSIFKYLYNFIKDEGGVRGIIKICDFNKLMALI 627 >UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TNE9_LACRL Length = 644 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 118/643 (18%), Positives = 222/643 (34%), Gaps = 66/643 (10%) Query: 2 LNERQLKIVDLL-EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAGY 59 LN RQ KIV LL T ELA Q GVS +T+ D+ + L I + G Sbjct: 4 LNARQQKIVRLLLSTSNTTAAELATQVGVSRKTVYSDLREIVLALRDDQVTITVTPRKGI 63 Query: 60 QLEIFER--RSFFQLLQK---------HDNDDRLLALLL-LNTFTPRAQLASALNLPETW 107 + + ++ + L+ + +L+ LL + QLA L + Sbjct: 64 TVTAKDADIQNILRKLKSEKTKLPDSDRSRERYILSELLRSQDYISIDQLAEVLFISRRV 123 Query: 108 VAERLPRLKQRYERTCCLASR-PGLGHFIDETEEKRVILLANLLR--------------- 151 + L L ++ T R PG G I+ E K+ +L +L Sbjct: 124 IQRNLDNLNRQLIGTDTELLRIPGRGVRIEGEEGKKRKVLFKMLSQYWDSDWRMDQSSEG 183 Query: 152 --KDPFLIPLAGITRDNLQHLSTACDN-QHRWPLMQGDY-LSSLILAIYALRNQLTDEWP 207 DP + I + L+ N + L +Y + SL++ + N++ P Sbjct: 184 WTADPAIAENPNIDSSVVNILARVVQNASEKLGLSLSEYAIQSLVIHLAIAINRIKAGNP 243 Query: 208 QYPGDEI----------------KQIVEHSGLFLGDNAVRTL-TGLIEKQHQQAQVISAD 250 D++ + + + L D + + LI Q + + Sbjct: 244 IGQNDDLIRNIGNERKSEAVQLAAMVEKEVNVRLPDEEIAYIQIHLIAASANQVSLANQH 303 Query: 251 NVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 ++ + +R+ + D L+ +T H+ + A ++K +P AFD Sbjct: 304 SMIPIPERLKELLHPFGYDRDLLFGLTVHMQAAVKRLRVNAGISNPYTEDIKRNYPQAFD 363 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQ 365 +L I + D + + L+ LER + Q + I+ S A + Sbjct: 364 EALIVSDDYERTEHISMNDDEVAYVALHIEAYLERRRAIHQRVNAAIVCSTGLGSAQLLA 423 Query: 366 LAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI 425 I R+ + ++ SL + + LII+ D +TV +++ + Sbjct: 424 ARIRREFSDISIVKIWSLQDFQRNSL-VGIDLIISTLRLPKGDIPT--VTVSPVMSDSDA 480 Query: 426 EQIKHFLATAFIRQQ---PERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADE 482 +++ + ++ E F G + SW+ + + + +L Q + Sbjct: 481 LLVRNLVRNIEDKKNNKHAEFFRIIHGDLMWLASNARSWKEVIQNLGDRLEQQGYADEGL 540 Query: 483 AQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA-- 540 + RE N AIPH E + TL P+ + ++ V Sbjct: 541 TASALERENLSFTSFDN-YAIPHAQPELVQAPAIAICTLEHPINWGHHKVSVVFFLAMTK 599 Query: 541 AADARHELKIFSYLASILCQHPAEI-IAGLTGYEAFMELLHKG 582 + + IF L I+ + T + +E+L +G Sbjct: 600 KMNQQQIDSIFDDLYDIVADTNLLNALTKATDKKELIEILKRG 642 >UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY31_9BACL Length = 650 Score = 175 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 108/635 (17%), Positives = 213/635 (33%), Gaps = 76/635 (11%) Query: 2 LNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 +N+RQ I+ +L + ++A G S +TI D+D ++ L + G Sbjct: 1 MNDRQKDILHMLLTDARPHLVIRDIALHFGCSEKTIRNDLDEIDQYLTQSSNARLVRKPG 60 Query: 59 Y--------------QLEIFERRSFFQLLQKHDNDDRLL---ALLLLNTFTPRAQLASAL 101 Y E+ RS Q+ + + + LL+ +LA Sbjct: 61 YGVALDISEPDKAQITAELLRSRSIKPKEQETEEERLIAVAYRLLMETKPVTIQELADKH 120 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANL----------L 150 +T + + L L+ + + S+ +G I+ E + L+ L Sbjct: 121 YTSKTVIKKDLDALRDWLAKWDLIVVSKQKVGVLIEGKERDKRAALSKLSQLTGEAGQAF 180 Query: 151 RKDPFLIPLAGITRDNLQHLSTACDNQ-----------HRWPLMQGDYLSSLIL------ 193 KD F I L+ L H +++ L I Sbjct: 181 IKDRFAPHELDIVTRELKQLELDAQLAFTDEAFDNLLIHTLLMIRRTKLKQPITFSEQEK 240 Query: 194 ------AIYALRNQLTDEW-----PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ 242 + + ++P DE+ + H + R T Sbjct: 241 VFVRGKPEFRWTGAFIRKLERFFAVRFPEDEVAYLTAHILGGKIRSRARIETAEPGADPS 300 Query: 243 QAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 + L++++ + ++ D L+E + HL L + + ++ Sbjct: 301 AETAEVRGLAETLVRKMSALTWMDFGQDEALMEGLRIHLYSTLNRLSYGLTVSNPMLQDI 360 Query: 302 KAAWPAAFDMSLHFITLLRE--QLDIPLFDSDLIGLYFACALERH----QNERQPIILLS 355 K +P FDM ++ L E IP + + L+F A+ER + ++ + + Sbjct: 361 KRMYPYMFDMVIYATRELSEGYPFTIPEEEVAYLTLHFQAAVERLSQPAEGRKRIVTVCH 420 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 ++ I + +ER V+ + ++L II+ ++ YIT Sbjct: 421 MGVGMSQILRSKLERKFPELHVLDSVRKADLPGYLAHHSVDFIISTIPL--ENVNVPYIT 478 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSN------VRGESWQHITRQIC 469 V ++ ++I F+ + + + + + Sbjct: 479 VSPLLETGETQKIADFIGRLDQESGHAEHAGSILGMYTQPSLIFPRLTIGHRFELIELLG 538 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 +L Q + D A + + RE I +AIPH + R R TL +P+E Sbjct: 539 NELAKQGFVEPDYAHQALLRERLSSTTIGGGIAIPHGDPKLIRTSRIAVATLEEPLEWQE 598 Query: 530 EVINHV-LIACAAADARHELKIFSYLASILCQHPA 563 E ++ V ++A A + K+F L S+L + P+ Sbjct: 599 EKVSVVFMLALAPQEQEMTKKLFQRL-SLLSEQPS 632 >UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) porter component IIA/transcriptional antiterminator n=2 Tax=Bacillus pumilus RepID=A8F9J6_BACP2 Length = 639 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 105/637 (16%), Positives = 214/637 (33%), Gaps = 65/637 (10%) Query: 5 RQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQL 61 R +++ L + EL +S R+I I N L + GY L Sbjct: 8 RTYQLIQRLFETKGFVKLEELTASFRLSDRSIRHLIKEANEQLKEAGAKIKTIRGKGYTL 67 Query: 62 EIFERRSFFQLLQKHD----------NDDR----LLALLLLNTFTPRAQLASALNLPETW 107 ++ +F L + ++R + LLL + QLA L + Sbjct: 68 LTSDQDAFLLWLHQQKLPARSLVPVMPEERVRFIMRKLLLQQDYLKIDQLAEELFISRMT 127 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEE-KRVILLANLLRKDPFLIPLAGITRD 165 V+ L + ++ R L S+PG G I+ E KR LL ++P L + + Sbjct: 128 VSSDLKKGRELLARYGMALVSKPGFGLKIEGDELQKRTCYADLLLEEEPALSHITEREQL 187 Query: 166 NLQHLS------TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQ--- 216 + +S N H+ L+ D ++ A+ Q T + + P + Sbjct: 188 HFPDISLETIRSIVLTNLHQESLLIKDIALKNLVIHLAIAIQQTRKNQRIPASTTRTQRS 247 Query: 217 ----------IVEHSGLFLG----DNAVRTLTGLIEKQ--HQQAQVISADNVQGL----- 255 I + S F D + L+ Q + AQ + VQ Sbjct: 248 PVLVRIAQKIIHQVSDTFHVTLSEDETDYLVMHLLANQTWKEAAQHQTTVEVQQAVAVFL 307 Query: 256 --LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 ++++ G + D L +++ H+ L + + ++ +K ++P FD+++ Sbjct: 308 QHIEKMSGHRFAD--DNILQQDLMLHMKPLLNRIQYGVSLQNPLLHEIKTSYPYPFDLAV 365 Query: 314 HFITLLREQLDIPLFDSDLIGLYFACALERHQ----NERQPIILLSDQNAIATINQLAIE 369 + L+ ++ + L+ A + ER Q +++ II+ A + ++ ++ Sbjct: 366 SGLNALQLVRTPNEDEAAYVALHIAASFERSQLDTSQKKKAIIVCGSGLGTARLLEIKLK 425 Query: 370 RDV-LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 ++ S + + ++I V I V ++Q+ Sbjct: 426 TAFQHELDIVELYSYQDYLMSTTLPCDVIITTVPLASKGKPV---IQVSAFFEQHDVQQV 482 Query: 429 KHFL--ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 + E N + +C++L H +++ + Sbjct: 483 NEVIHLLNGHGTPSQELMAFFQERLTILNADLSGKDEVLDALCSRLETYHLVSSSFRSSV 542 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARH 546 + RE + +A+PH E L QP++ ++ V + D Sbjct: 543 LEREQMSSTYLGKGIAMPHPLITNEGTSCVAIAHLKQPIDWQGNQVSLVFLLAIHKDDAA 602 Query: 547 ELKIFSYLASILCQHPAEI--IAGLTGYEAFMELLHK 581 + F A L +P I + ++ M L + Sbjct: 603 YMNQFFEQAVDLLDNPNRIHSLNQSKTFDELMNALFQ 639 >UniRef50_C3RJ67 Transcription antiterminator bglG n=3 Tax=Bacteria RepID=C3RJ67_9MOLU Length = 635 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 111/641 (17%), Positives = 225/641 (35%), Gaps = 74/641 (11%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 MLN+RQ I+DLL T E+A+ VS RTI DI+ +N + I A+ G Sbjct: 1 MLNKRQTNIIDLLNDYGKWITGKEIAKVLNVSDRTIRSDIENINNYYDC-ILIQANKRLG 59 Query: 59 YQLEIFERRSFFQLLQKHDNDDR--------------LLALLLLNTFTPRAQLASALNLP 104 Y+L+ LL K D + + + LL + L + + Sbjct: 60 YRLD-------ETLLHKQDIETKDIIPQTSQERCIYIIQELLFKSHEINLIALQDQVFVS 112 Query: 105 ETWVAERLPRLKQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLLRKDPF-----LIP 158 + + ++++ L R ++ E + L LL + L Sbjct: 113 GYSIDNDIKKIRKMINDYPSLKLVRSKNYISLEGNETDKRKLYKQLLTAETQGNFMNLNS 172 Query: 159 LAGI--------TRDNLQHLSTACDNQ------HRWPLMQGDYLSSLILAIYALRNQLTD 204 +AG+ +D L+ + D Q + G + +I Y +++ Sbjct: 173 IAGLWNSFDLLEVKDILEEICEKYDYQIHEMTFPMIMIHAGVAIERIINHNYIKNQTISE 232 Query: 205 EWP-----QYPGDEIKQIVEHSGLFLGDNAVRTLTGLI------EKQHQQAQVISADNVQ 253 + Q D Q+ + L + V L+ + + + A +V+ Sbjct: 233 KLESSREYQISYDFFTQVSTMINIELVTDEVILFALLLMGKRANDYRKDIIKEKLAVDVE 292 Query: 254 GLLQRV----PGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 L++ V ++ D L + HL L + + +K +P Sbjct: 293 HLVEAVIVEVKEYFDIDFSKDKDLKVGLAMHLQSLLERQKNNVQVTNVYLQEIKRKYPLV 352 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ--PIILLSDQNAIATIN 364 F+M++ +L E + + +++ + L+ A +R + ++ I+++ + ++ + Sbjct: 353 FEMAVRAGEVLAETCEDNINENELAFLALHLGAAYDRVNSLKRYRAIMIIPNNQMLSKMC 412 Query: 365 QLAIERDVLNCRVIIARSLSELV-AIREEIEPLLIINN---SHYLLDDAVNNYITVKNII 420 + ++ R++I +S ++ +E EP LII H L V + + Sbjct: 413 RDKLKIR-FEERMMIVQSYGFFEESMVKEEEPDLIITTVPLKHNLNIPTVQVTLFINYED 471 Query: 421 TAAGIEQIKHFLATAFIRQQPE--RFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHI 478 + + + + + FH N + + I +C +L+ + Sbjct: 472 ESKVFQTLNILDKHRYHDDFVSLIKELMREDLFHVKN-TMNNPKEIIDYLCDELIEKGLA 530 Query: 479 TADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA 538 T + + RE VN A+PH + L +PV + +++ Sbjct: 531 TQSYKEDVFRREAVSATSFVNGFAVPHSIEVSANESCISTLILDKPVIWGGFEVKLIILL 590 Query: 539 CAAADARHELKIFSYLASILCQHPAEIIA--GLTGYEAFME 577 H LKIF S + + + ++ FME Sbjct: 591 AIRETDNHLLKIFFDWLSSIVSDSNKFTQLLEVREHQEFME 631 >UniRef50_B6FYB2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYB2_9CLOT Length = 631 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 91/631 (14%), Positives = 214/631 (33%), Gaps = 58/631 (9%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML+ RQ+ ++++L T E+A+ V+ RTI DI+ +N + + + AG Sbjct: 1 MLSNRQMNVINILSDSNNWMTGKEIAKILNVTDRTIRSDIESINKYYDCQLIES-NRRAG 59 Query: 59 YQ----LEIFERRSFFQLLQKHDNDD---RLLALLLLNTFTPRAQLASALNLPETWVAER 111 Y L + +++ + ++ + LL N QL + + + Sbjct: 60 YHIDDILLAKQDIEVKEIVPQTSHERCIWIIQELLFRNKEINLIQLQERVFVSGYSIDND 119 Query: 112 LPRLKQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLLRKDPF--LIPLAGITRDNLQ 168 L ++++ E L R ++ E + L LL ++ + L I Sbjct: 120 LKKIRKIIENYPSLKLIRSKNHIRLEGEEIDKRKLYKYLLTEETHGNFMNLNSIADFWTD 179 Query: 169 HLSTACDNQHRWPLMQGDY-LSSLILAIYALRNQLTDE---WPQYPGDEIKQIVEHSGLF 224 A + + DY + + + + E Y +I + S + Sbjct: 180 FDLLAIKDIFEEVCEKYDYKIRETTFPMIMMHAGVAIERIINHNYLTSDIDDRLVESTEY 239 Query: 225 LG-----------------DNAVRTLTGLIEKQ---HQQAQVISADNVQGLLQR----VP 260 D+ V+ + L+ + + + ++V+ L+ R + Sbjct: 240 HVSYEFFERVSKLLDIEIVDDEVKRFSLLLLGKSSGDYRKSNNNKEDVKRLIDRLIEQIA 299 Query: 261 GIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 ++ D L + H+ + + + +K +P F+M++H ++ Sbjct: 300 EYFGVDFSKDWDLKVGLETHIRSLIERQRNKVDVTNLYLKEIKRKYPLVFEMAIHSAKVI 359 Query: 320 REQLD--IPLFDSDLIGLYFACALERHQN--ERQPIILLSDQNAIATINQLAIERDVLNC 375 + I + + + L+ A ER + + + ++++ ++ + Sbjct: 360 EKFTGYVIDEPEIEFLALHLGAAYERIDSVQKYRAVVIMPHNQMLSKPCIEKLNSR-FGD 418 Query: 376 RVIIARSLSELVAIRE-EIEPLLIINNS---HYLLDDAVNNYITVKNIITAAGIEQIKHF 431 R+ + + + + E EP II H L + + + + + + Sbjct: 419 RMEVVKMFTFFEESQVMEYEPNFIITTLQIKHNLDVPTIQISLFLNYEDESRIFQLLNQL 478 Query: 432 LATAF---IRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 + + ++ + + ES I ++C +LV + + + Sbjct: 479 DKERYSADFKILVKKMIRK--DLFHVHETYESSDEIINKLCNELVEKDLADERYKEDVFR 536 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE A+PH + + L +PV+ + + +++ L Sbjct: 537 RESMSATSFSYGFAVPHSMEVSTKESCLSVMVLDKPVKWGDFDVRLIILLGIRDTDNSLL 596 Query: 549 KIFSYLASILCQHPAEI--IAGLTGYEAFME 577 KIF S ++ + + YE FM+ Sbjct: 597 KIFFEWLSNTVTDSKKLARLLAVNNYEDFMK 627 >UniRef50_Q67QV8 Transcription antiterminator BglG family n=1 Tax=Symbiobacterium thermophilum RepID=Q67QV8_SYMTH Length = 642 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 108/636 (16%), Positives = 215/636 (33%), Gaps = 58/636 (9%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 M N+ L + ++ LA+ VS RTI + +N + + S GY+ Sbjct: 1 MGNKSDLIGILRRQEDWVPASTLARMLQVSTRTIRNYVVAINGGRDEP--LILSSYKGYR 58 Query: 61 L-----EIFERRSFFQLLQKHDNDDRLLALLLL-NTFTPRAQLASALNLPETWVAERLPR 114 I E L+ D + L+ LA L + + + L + Sbjct: 59 YNRSAAVIPEPHRSRDDLKPEDRVSLIARRLVSSRGSVNFYDLAEELCVSDATLERDLTK 118 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITR------DNLQ 168 +++ R I E ++ +++LL D + + D Sbjct: 119 VREALRPFALKVFRESDQILIAGMERQKRKYISHLLSSDQQSVLSVALDEFFEGTVDRYT 178 Query: 169 HL-STACDNQHRWPLMQGDY-----LSSLILAIYALRN--QLTDEWPQYPGDEIK----- 215 A R+ + DY + L++ + + N +T+ P + K Sbjct: 179 EFERYARGLLKRFGIYADDYGFRNIVIHLVVTLERVANGESITENVPLSTLRDRKEYEVA 238 Query: 216 -----QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQ--VISADNVQ------------GLL 256 + E+ G+ L D + + I + +I+ N++ L Sbjct: 239 LCIGEYVRENYGVVLTDAELYYVALTISTNSNLLKYKLITPTNIREYIEEKYILLAKMAL 298 Query: 257 QRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 +R+ L D V T H+ + + + + + K +P +DM++ Sbjct: 299 RRLEDTFYLEPFDDDFVIQFTIHIRNLIQRALTGSHVKNPLVGKFKTTYPLIYDMAVLVA 358 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQ--LAIERDV 372 LRE I + D + I + LE+++ +R I L +++ L + Sbjct: 359 NQLREIEGIHVPDDEIVFIAFHIGAYLEQNKADRGRINTLFVYADYHNMHEPVLTKIQQA 418 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 L+ + I ++ + LII+ + + + + V T A ++ I+ + Sbjct: 419 LDQDLNIVAAVPVREFAFAPYDCQLIISTVPETVVEGLP-VVYVNVFPTEADLKVIRRKI 477 Query: 433 ATAFIRQQPERFFSAPGSF-----HYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 + + F NV E + R + + Q ++ Sbjct: 478 EEIRLDMRAASVRDHIQRFAVPALFRRNVYAEDEFAMIRILTQECAHLGLCPPSFEQEVL 537 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE 547 RE N++AIPH R + +P+ N + +++ D R+ Sbjct: 538 DREAMSSTAFPNQVAIPHSLQHSATRSFLSIVVNERPMRWGNFDVRIIILIGVCKDDRNT 597 Query: 548 LK-IFSYLASILCQHPA-EIIAGLTGYEAFMELLHK 581 + FS L S+LC A + YEAF++ L + Sbjct: 598 FQEFFSDLVSVLCNEIATRQLIQCDSYEAFLQTLTR 633 >UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_LISW6 Length = 638 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 104/646 (16%), Positives = 221/646 (34%), Gaps = 91/646 (14%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQLEI 63 +Q+ + L+ + + EL + V+ RTI DI +N L S GY+L + Sbjct: 12 KQIVHMLYLKMEFISGRELGEALAVNPRTIRNDIKMINEILKTGGNQIESLSGVGYRLVV 71 Query: 64 FERRSFFQLLQKH---------------DNDDRLLA-LLLLNTFTPRAQLASALNLPETW 107 + + ++L + D D ++ LLL N + +LA L + ++ Sbjct: 72 SDEKILREVLLDNSVGRANMNIVPMFAEDRTDYIIRYLLLNNDYVKLEKLAEELFVSKST 131 Query: 108 VAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEK-RVILLANLL--RKDPFLIP----- 158 + + +K++ E + R G I E R LL +P + Sbjct: 132 INLDILEVKRKLKENGLKVEKRASYGIRITGVEVAIRFCFSRYLLVESANPLITDTERNF 191 Query: 159 -------------LAGITRDNLQ-----------HLSTACDNQHRWPLMQGDYLSSLI-- 192 ++ I + N+ H++ A + L + Sbjct: 192 FSEVNLEMIEQVVISNIAKYNIHMTDISVKNLIIHIAIAVCRVKDNCYVHVTDLEDIEFS 251 Query: 193 LAIYALRNQLTDEW-----PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI 247 + + + E +P EI ++ H ++ Sbjct: 252 IPEFRAAQDIIKEIDLSEGIHFPESEISYLLLH-------------LSSKNRKSDFNNYR 298 Query: 248 SADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 V +L ++ + + D +++ NI HL + + + + NLK+ +P Sbjct: 299 EYIIVDKMLTKIKELYGYDFKQDQKMISNIALHLKPAINRMKFNMNIQNPYLKNLKSNYP 358 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACAL--ERHQNERQPIILLSDQNAIAT 362 AF++ L +L ++L + +++ + ++F L E ++++ +I+ + + Sbjct: 359 LAFELGLVAKDVLEQELKTKVNEAEVGYLAIHFLYGLDKEVVSDKQKVLIVCASGLGTSQ 418 Query: 363 INQLAIERDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + + + ++ N +I S E + ++ L ++ V +T Sbjct: 419 LLESKVRKEFENALDIIGVYSFKEYEQSGTMCDFVISTVPLRMKLHP----FVQVSPFLT 474 Query: 422 AAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNV---RGESWQHITRQICAQLVAQHHI 478 A I I + + E F+ F S + + + + + L+ + Sbjct: 475 KADIRNITALI----KKDAMENQFNVDKVFKESLFLISDKKDKEQVLIDLASLLLENKIV 530 Query: 479 TADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLA-QPVEVNNE-VINHVL 536 AD + RE + N LA PH + + V+ N E V Sbjct: 531 GADYLPSLFEREEIVPTYLGNGLAAPHPIEANVQETVIGVCICSGGGVKWNEEDQAQVVF 590 Query: 537 IACAAADARHELKIFSYLASILCQHPAEI--IAGLTGYEAFMELLH 580 + + +L L S L + P + + +T +E FM +L Sbjct: 591 MLAVKNRQQQQLATVYELISNLVESPKAMGELKRVTNFEGFMRVLQ 636 >UniRef50_A0KQ06 Transcription antiterminator, BglG family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KQ06_AERHH Length = 634 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 103/627 (16%), Positives = 220/627 (35%), Gaps = 58/627 (9%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQLEI 63 R +++ LL +P ELA++ VS RT+ D+ LN + + +GYQL+I Sbjct: 8 RLHQLLTLLHAEPLPQEELARRLSVSTRTVRTDVATLNEIIATQGAHLIHQRGSGYQLKI 67 Query: 64 FERRSFFQLLQKHDNDDRL------------LALLLLNTFTPRAQLASALNLPETWVAER 111 + + F LL + + L + LL +LA L + Sbjct: 68 YNQELFEALLAAQEQESGLPRTSRERVLHLQILLLTAEQGIKLDELADTWYLSRAALQGD 127 Query: 112 LPRLKQRYER-TCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGITRDNLQH 169 + +++R + S+P G I E R L L ++ PL + + Sbjct: 128 MAEVRERLAHFGLAIDSKPRQGMRIQGGETAIRACLTQLLYQELLHSNPLQSLLPNLCPS 187 Query: 170 LSTACDNQHRWPLMQGDYLS---------SLILAIYALRNQLTDEWPQYPGDEIKQIVEH 220 + H + L ++ A+ LR E Q+ +++ + Sbjct: 188 KTLEVVGNHIHEQLGRHQLRLADESLQQLAIYCAVALLRQAAGHELRQFTSEDLTAPLLA 247 Query: 221 SGLFLGDNAVRTLTGLIEKQH-----QQAQVISAD--------------NVQGLLQRVPG 261 + + TLT E++ Q ++AD V+ LL + Sbjct: 248 VARDIYGE-LPTLTPPGEEEIACLAIQIQARLTADAPQLSPAMAAESEQLVEHLLAYIHQ 306 Query: 262 IASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH-FITLL 319 ++ D QL ++ H+ L + +++K +P A+D++L + Sbjct: 307 HYPYDLRGDLQLRADLQTHISAMLLRVKYQIGSHNPLADHIKQYYPLAYDITLAAISEWI 366 Query: 320 REQ-LDIPLFDSDLIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIERDVL 373 R+ + + + ++ LERH Q ++L NA + + I+R+ Sbjct: 367 RQTPYRLTHHEIGYLVIHIGVGLERHYDIGYTRRPQALLLCDAGNATFRVLEARIKREYP 426 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLA 433 ++ + S+ + + + +I + V + ++ Sbjct: 427 QLQLTMLESVRDYEGLARIEQDFVISTVKAGEKNVPVVQVAPFPTQYQLEQLGKLVLVDR 486 Query: 434 TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 T +++F A + S + +IC+QL + + + + RE Sbjct: 487 TRPY--LLDKYFDADHFMVVT--EPLSQAALFDRICSQLEVEDLVESGFRGSLQERERIV 542 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV--INHVLIACAAADARHELKIF 551 ++ + +A+PH R + + Q ++ N ++A A AD + ++ Sbjct: 543 STMLGDGIALPHSLGLLARCTLVYTVLAPQGIDWGNGESATLVFVLAIAKADYEEAMGLY 602 Query: 552 SYLASILCQHPAEIIAGLTGYEAFMEL 578 +++ + + + + AF L Sbjct: 603 DLFLALMNEKASRSLLACRDFAAFKTL 629 >UniRef50_C9A391 Transcriptional antiterminator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A391_ENTGA Length = 642 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 98/642 (15%), Positives = 224/642 (34%), Gaps = 71/642 (11%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + + +K++ L +Q + +LA++ G+S RTI I + + ++ + S + GY Sbjct: 1 MKAKYIKLLHYLNEQDNWVSSTQLAEKFGLSKRTIKSYIADIQ---DNESDLILSSNKGY 57 Query: 60 QLEIFERRSFFQLLQKHDNDD-------RLLALLLLNTFTPRAQLASALNLPETWVAERL 112 ++ +FF + + LL L+ LA L + E+ + Sbjct: 58 RVVASNLVTFFNNTETSVPETPTERTAYLLLRLISTEEALSVYDLAEELFISESTLLSDT 117 Query: 113 PRLKQRYER---------------TCCLASRPGL---------GHFIDETEEKRVIL--- 145 +LK++ A R + HF+D T+ + + Sbjct: 118 KKLKKQCSELAIEVRLTKDTLQLIGTEKAKRQLIHQTLLSELDNHFVDMTKLQESFIDFD 177 Query: 146 -------LANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLS---SLILAI 195 +A L F +T + + HL+ A D S+ + Sbjct: 178 LDYIKEIIAELFSDYDFFTNDYALT-NIVIHLAIAVDRMKGNFQSPEAEAQAPHSIHPTV 236 Query: 196 YALRNQLTDEWPQ-----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD 250 + ++ ++ + +P +EI+ + + +V ++ + D Sbjct: 237 LKISEKIAEKVAERYGIRFPKEEIRDLAI--LISANGTSVNFTQISPDELEKVTDKNCLD 294 Query: 251 NVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 V+ +L +V + ++ + + H+ L R LK P +D Sbjct: 295 LVRKILAKVDELYFIDGNEPEFFIRFALHIKNLLYRINNGYSCRNPMTETLKKECPLIYD 354 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALE--RHQNERQPIILLSDQNAIATINQL 366 ++ ++++++ + + + I + ALE + + + +L I + Sbjct: 355 CAVQVSHVIQKEIGYTISEDEIAYIAFHLGYALEIQKQRTNKINCTILVPHYYNMNIQVM 414 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 + + + I L+ + ++ LI++ A Y+T+ T + Sbjct: 415 EKLQKNFSDDLEIQNILTS-EKELQYVDTELIVSAVKLKQVIA-TPYVTINPFFTLEDRQ 472 Query: 427 QIKHFL----ATAFIRQQPERFFSAPGSFHYS-NVRGESWQHITRQICAQLVAQHHITAD 481 QI + Q + F S +S ++ + +Q+C Q+ + + Sbjct: 473 QITAKIFDIKEKKRKEQFVKTFLSLVDKKRFSYTTENQNSAELLKQLCGQMKEEGIVDET 532 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA 541 ++I RE + +AIPH + R + ++ N + V + Sbjct: 533 FYPQVIEREQLSSTAFGS-VAIPHSLTMNANRTGVAIAVNPKGIQWGNNRVTLVFLISIN 591 Query: 542 ADARHELK-IFSYLASILC-QHPAEIIAGLTGYEAFMELLHK 581 RH + IF LA I + ++ +T ++ F++ L + Sbjct: 592 YHNRHVFREIFDDLAMICTDEQNIHKLSAITTFDEFVDTLTQ 633 >UniRef50_B7CCL3 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCL3_9FIRM Length = 608 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 85/607 (14%), Positives = 227/607 (37%), Gaps = 29/607 (4%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 +LN+RQ KI+++L ++ T E+++ +S +T+ +I +N I + G Sbjct: 4 LLNQRQRKILEILSRENECITSLEISKNLSISSKTVQNEIVAINTKYGDH-IIQSKKGRG 62 Query: 59 YQLE---IFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 Y+L+ + Q++ ++ ++ L++ +LA L + + + + + L Sbjct: 63 YKLKDNFVINSDDKQQVVSENRKI-FIVKELVVQNVIDYYELADRLYISTSSLNKDIKEL 121 Query: 116 KQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLLRKDPFLIPL-AGITRD-----NLQ 168 + + R + + K+ ++ LR + I +++ Sbjct: 122 NDEISKKFNVCIVRKKNKLYFKGDDVKKQKVIVYYLRMESENADFDMSILESYFAPLDVK 181 Query: 169 HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ--YPGDEIKQIVEHSGLFLG 226 + A R + + + ++ L QL + + D K + + +GL L Sbjct: 182 FIRNAIYEYVREKDIVVSDFELMSILLHILAAQLNQNFQENTVNNDFSKYLFKQTGLLLS 241 Query: 227 DNAVRTLTGLIEKQHQQAQVISADNVQGLL----QRVPGIASLNIID-AQLVENITGHLL 281 + + ++ + Q + + L + I S+N+ D L++ ++ HL Sbjct: 242 EEVATRIEISLKLNNIDNQSVYYQEYKYFLMEIFDEIKQIYSINLKDDNTLMDELSLHLK 301 Query: 282 RCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ--LDIPLFDSDLIGLYFAC 339 + + ++ + + +D++ + E+ L + + + I ++ Sbjct: 302 YAERRCKANTQLKNPLIDEFRKKYVLVYDIAAFISSRFYEKTTLRLDISEVGYIAMHILG 361 Query: 340 ALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLII 399 AL++ E I+L++ L +D+ N + S + I E ++P LI+ Sbjct: 362 ALQKLSGEDIKIVLVNPYGKAVEKIILNGIKDISNVKYCGNFSFLDTKGISE-VKPDLIL 420 Query: 400 NNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPG---SFHYSNV 456 +++ Y +++ + + I+ + + + + + + Sbjct: 421 TLVQLNWNNSCEVY-KIEDYLNSNEYHAIEKIVKQIKVNNAYQSLAISECFNENLFLPEI 479 Query: 457 RGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRG 516 ++ I +C +L +++ + ++ RE N++AIPH + ++ Sbjct: 480 SLQTRDEIIDLMCKRLYENNYVNENFRNQVYQREAVAPTCFSNQIAIPHSIKKDAKKSGI 539 Query: 517 FFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPA-EIIAGLTGYEAF 575 L +P+ N + + + K++ + + + + ++ F Sbjct: 540 CISVLREPILWNGYNVRLIFMFALNKSFDQVPKLYELILDAIDDKTRYQKMLECKNFKDF 599 Query: 576 MELLHKG 582 + +L KG Sbjct: 600 ISILMKG 606 >UniRef50_A8AYR4 Transcription antiterminator BglG family n=1 Tax=Streptococcus gordonii str. Challis RepID=A8AYR4_STRGC Length = 629 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 107/628 (17%), Positives = 212/628 (33%), Gaps = 54/628 (8%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML +RQ I+D+L + T LAQ VS RTI DI+ +N + I ++ G Sbjct: 1 MLKKRQNNIIDILNDKAEWITGKALAQMLNVSDRTIRSDIESINMEYQRE-IIISNKRLG 59 Query: 59 YQLEIFERRSFFQLLQKHD-----NDDR----LLALLLLNTFTPRAQLASALNLPETWVA 109 Y+L+ E+ L+ H+ +R + LL + L + + + + Sbjct: 60 YKLD--EQAISEMELETHNIIPQTPQERCIWIIKELLFNSRELNLYDLENRVFISGYSIE 117 Query: 110 ERLPRLKQRYERT-CCLASRPGLGHFIDETEEKR-----------------VILLANLLR 151 L R+K+ + L I E EKR + +LANL Sbjct: 118 NDLGRIKKMIKDYHLNLKRSKNFVELIGEENEKRKLYRKLLTDEVQGNFTNLNILANLFS 177 Query: 152 KDPFL----------IPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ 201 FL +++L + ++ G+Y ++ L + Sbjct: 178 DFDFLKISDIFTETCYEYDYQIKESLFPIVMIHAGVAIERIISGNYAENIELPNESFTET 237 Query: 202 LTDEWPQYPGDEIKQ-IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVP 260 L + Q ++Q HS L +Q + + V +L ++ Sbjct: 238 LEYQLSQDFFARVEQGCQIHSVENEIIKFAILLCSSNSQQDFTQKKEIREIVVAVLTKIN 297 Query: 261 GIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 +N D LV + H+ + + +K +P F+M++H +L Sbjct: 298 DNFDINFSDDEALVSGLGNHISSLIERQKTNTSMSNVYLREIKRKYPLVFEMAVHAGEVL 357 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQN--ERQPIILLSDQNAIATINQLAIERDVLNC 375 E+L + +++ I L+ A +R + + + ++++ + ++ I + Sbjct: 358 SERLGKKVSENELSFIALHLGAAYDRVNSPSKYRAVVIIPNNQMLSKPFIDKINSRFEDR 417 Query: 376 RVIIARSLSELVAIREEIEPLLIINN---SHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 I+ I P LII+ H + + + + + + Sbjct: 418 MTIVFNYKIFDERQVRAISPDLIISTVSLKHQIKIPTLQLSLLFDYEDESKIFQLLNQLD 477 Query: 433 ATAFIRQQPERF-FSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + + + Y + +C +L+ + D +I RE Sbjct: 478 KERYHEKFQKMMEHLIQKKLFYRKDHVADGEEAIEYLCNELIKEGLADEDYKANVIKRER 537 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIF 551 V A+PH +TL +PV+ N + V++ + + IF Sbjct: 538 ISATSFVQGFAVPHAIEISTSESCIATLTLDKPVQWGNFEVRLVILLAIRGEDNQLMSIF 597 Query: 552 SYLASILCQHPAEI--IAGLTGYEAFME 577 S L P ++ + + F+E Sbjct: 598 FDWLSNLVMDPQKLSALLKARDQKDFIE 625 >UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D9V5_GEOSW Length = 661 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 107/659 (16%), Positives = 233/659 (35%), Gaps = 87/659 (13%) Query: 1 MLNERQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGK-ARIFASGSAG 58 ML+ + + LL T LA + S +T+ D+ L+ L+ K + Sbjct: 1 MLSRHKQLLKQLLTAHTYTSVSALANKLVCSEKTVRNDLKALDEFLSQKYPNVVIERKPS 60 Query: 59 YQLEI----FERRSFFQLLQKHDNDD--------RLLALLLLNTF-TPRAQLASALNLPE 105 + I E++ + L + + + +L+ +LL QLA + + Sbjct: 61 VGVIIRGSDEEKQQLLRDLSRMEETNPPQEYRKLQLIKILLTEDKPVTMQQLAEQFYVSK 120 Query: 106 TWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEE-----------------------K 141 + + L ++ + L +P LG ++ +E+ K Sbjct: 121 SVIQYDLEEIEHWLQSFGLVLIRKPHLGIKVEGSEKAWRTALSRLIELFVDHSYYILDSK 180 Query: 142 RVILLANLLRKDPFLI--------------PLAGITRDNLQ-HLSTACDNQHRWPLMQGD 186 ++ L+ ++L+ + PL + +L H++ A + + D Sbjct: 181 QLKLIEDVLKPYELTLIEKEIRKMDEWLEFPLTDQSVISLTIHIAIAIKRIKKGHRIHID 240 Query: 187 --YLSSLIL-AIYALRNQLTDEWPQ-----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIE 238 L L Y L QL + Q P EI I H R + Sbjct: 241 TNQLQELQKKPEYKLAEQLAKQIEQWVAVKIPKAEIGYITLHLL------GARLRYDQVH 294 Query: 239 KQHQQAQVISADNVQGLLQRVPGIASLNI-------IDAQLVENITGHLLRCLAAPVWIA 291 ++ Q+++ + + L I +++ D +L+ +T H L Sbjct: 295 EKEDIEQLLTKMDYEALQIVKELIHDISLCTDERLRKDKELLLGLTIHFHSTLNRLRNGL 354 Query: 292 EHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER- 348 + + ++K + +F+M L I + ++ ++ + + + I L+ ALER QN+ Sbjct: 355 AVKNPLLKDIKQMYRYSFEMVLSLIPKIEKKANVAIPEDEIAYIVLHIQAALERMQNKNE 414 Query: 349 --QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLL 406 + II+ + + + + + + +I S+++L +P L+I+ Sbjct: 415 KIRTIIVCATGSGTSRLIEAKLSTTFPKLEIIAVTSMAKLHETIATTQPDLLISTVPL-- 472 Query: 407 DDAVNNYITVKNIITAAGIEQIKHFLA--TAFIRQQPERFFSAPGSFHYSNVRGESWQHI 464 + ITV ++ ++ ++ ++ + + R P + +V Sbjct: 473 EHPKIPVITVSPLLPKKELDILEQWIERISQPYHYEMLRQLMNPAC-IFLDVPVTDRFEA 531 Query: 465 TRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP 524 I +L + ++ Q RE I +AIPH + + L+ P Sbjct: 532 IDYIANELYQRGYVQKPYGQSAKEREALSSTYIGGGIAIPHGQMQWINQSIIAVARLSSP 591 Query: 525 VEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPA--EIIAGLTGYEAFMELLHK 581 ++ E + V + D ++K ++L + + ++ + F ELL K Sbjct: 592 IDWGGEQVTFVFMIAHRLDNNEQIKKLFQEIALLSEDEPTLKQLSICKTADEFYELLKK 650 >UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=Clostridium difficile RepID=C9XMT3_CLODC Length = 642 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 106/641 (16%), Positives = 229/641 (35%), Gaps = 66/641 (10%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLN-GKARIFASGSAG 58 +++R L + LL + T L+ VS RTI DI +N TL A I G Sbjct: 1 MHKRLLTLFKLLNESDDKITCKTLSNHLKVSERTIRNDITSINGTLEKNGAIIKIKKGEG 60 Query: 59 YQLEIFERRSFFQLL--------QKHD--------NDDRLLALLLLNTFTPRAQLASALN 102 Y ++I + Q L + N L +L NT+ LA++L Sbjct: 61 YYIDILNLALYQQYLALISDDIMDSSEIPDSPIERNQYILKYILYNNTYIKLEDLANSLY 120 Query: 103 LPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEK-RVILLANLLRKDPF----- 155 + + + + R+K + L S+P G ++ E R + N++ ++ Sbjct: 121 VSKFTILNDIKRIKPILSKYNLILVSKPYYGVKVEGKEIDIRRCISNNMINRNFENYIIG 180 Query: 156 -------------LIPLAGITRDNLQHLST----------ACDNQHRWPLMQGDYLSSLI 192 LI L + + + + Y + Sbjct: 181 ITDREIELFNNVDLIELQRVVLSEINKFNINFLDFNLKNFIIHLAITISRILDGYCLDNV 240 Query: 193 LAIYAL---RNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA 249 L + N + Y + I+ + N T + L++ + Sbjct: 241 LDVVLTDFQSNTTVENIFNYIESKYTIIISKADRVYLYNHFITKSSLLDNVSNRVDTKII 300 Query: 250 DNVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 + V+ +L+ + + ++ + L +++ H L + + +N +K+ +P A Sbjct: 301 EYVEEILEVINNQYTFDLRNDSVLFDDLVLHFKSILNSKSYNLNKVNPLINTIKSNYPLA 360 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER---HQNERQPIILLSDQNAIATI 363 F+++L+ I + + L + + + L+ +ER + + + ++L+ ++ Sbjct: 361 FEITLNAIEKVFKNSIYSLTEDEIGYVSLHIGAGIERFFQNNIKCKNVVLVCGSGYGSSR 420 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 V + ++ I + LS + E+ + II ++ L D++ + V + Sbjct: 421 LLEVQLNKVFHDKINILQCLSFNQFLASELSDVDIIISTIPLNHDSIP-IVLVDLKLLKK 479 Query: 424 GIEQIKHFLATA--FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 IE I + + FF + N + + + + +C +L + Sbjct: 480 DIENISKSITNNSHIYSNLLDNFFDK--NLFIVNPKIKDKDELIKLMCNKLTQSEIVFPS 537 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV--NNEVINHVLIAC 539 A+ + RE I + LAIPH R + L +P+ ++ V +++A Sbjct: 538 FAESVFYRESLSSTNIDDFLAIPHPMELSSIRTKICISILNEPIYWSEDSTVKLIMMLAI 597 Query: 540 AAADARHELKIFSYLASILCQHPAEI-IAGLTGYEAFMELL 579 D I+ L I+ + I+ ++ F+ ++ Sbjct: 598 NKDDYIKINSIYDILLKIIHDNDIRDSISNCNDFDNFLSII 638 >UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR family n=3 Tax=Thermoanaerobacter RepID=C6PFK2_9THEO Length = 651 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 103/650 (15%), Positives = 235/650 (36%), Gaps = 76/650 (11%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GS 56 MLN R+ KI+ L++ +P T L+ TGV+ RT+ +DI+ L L+ + G Sbjct: 1 MLNSREKKILIALKEAKKPLTISNLSAITGVTTRTVKKDIEILKQKLDRNKVEIITKPGV 60 Query: 57 AGYQLEIFERRSFFQLLQKHD-------NDDRL----LALLLLNTFTPRAQLASALNLPE 105 + E + +L + DDR+ LL N + L + + Sbjct: 61 GVWIEEKVDDEYLENVLYSSNKIINPIFPDDRVYYIAKRLLETNNLMTLEDFSVELYVSK 120 Query: 106 TWVAERLPRLKQRYER-TCCLASRPGLGHFIDETE----EKRVILLANLLRKDPFLI--- 157 + VA+ + ++++ + L +P G + E +L N+ K +I Sbjct: 121 STVAKDILKVEEFLGKYGIKLYKKPKHGIKVIGDEKSIRLANAEILKNVTTKHDEIINDS 180 Query: 158 --------PLAGITR-------------------DNLQHLSTACD---NQHRWPLMQGDY 187 L I R L HL+ + + L D Sbjct: 181 LKDLLKDVDLNAIQRIIQGSEEKFNYILSDVSFKGLLIHLAISIKRLWEGKKVTLDLKDL 240 Query: 188 LSSLILAIYALRNQLTDE-----WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ 242 + + L EI I H N + T E + Sbjct: 241 NLLKKEKEWEIAKDLAKNIEKRFNVVVDDTEIGYITMHLMGAKLQNDIET-EKFSENYLK 299 Query: 243 QAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 + ++ ++ + + D +L+ + HL + + + + Sbjct: 300 RLDCKLYIILKSIVNDIAEMTGYKFYNDKKLLVGLFLHLKPTINRLKNGVKLDNPFLEEI 359 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH----QNERQPIILLS 355 K AF++S+ F L+E I + + + + ++F ++ER +N++ +I+ + Sbjct: 360 KKECGIAFEISISFWEKLKEFYKINVNEDEIGYVAIHFGASIERLKSVDRNKKTAVIVCA 419 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 A + + + N +I + + ++ +++ P ++++ + ++AV Sbjct: 420 TGIGTAQLLTARLTKLFPNIELIKVLPVIKAKSMLKDLSPDIVLSTVPFETEEAVVIN-- 477 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFH-----YSNVRGESWQHITRQICA 470 V + +++I+ + I + ++ S ++ + ++ + + ++ Sbjct: 478 VSPFLDEEDVDKIERIVKNKKIDTEVKKIKSKILNYISEDLVFLKIKAKDKFEVLFKMSQ 537 Query: 471 QLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE 530 +L+A +++ + ++ R+ + N +AIPH + + TL P++ +++ Sbjct: 538 RLLALNYVKEGFYESVLQRDSFSSTAVGNLVAIPHPYEGFVNLPKISVATLKSPIKWDDD 597 Query: 531 -VINHVLIACAAADARHELK-IFSYLASILCQHPAE-IIAGLTGYEAFME 577 + V + + E K IF LA + + Y F+E Sbjct: 598 KKVQIVFMIALDLSIKEEFKNIFDELAEAINDKEKILKLVDCKDYREFIE 647 >UniRef50_Q721P5 PRD/PTS system IIA 2 domain protein n=15 Tax=Listeria RepID=Q721P5_LISMF Length = 632 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 102/625 (16%), Positives = 214/625 (34%), Gaps = 55/625 (8%) Query: 6 QLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 Q +I+ L +Q T ELA + RTI +I +N + S GYQ+ Sbjct: 4 QKEILAYLHKQENKWVTSNELAAFCECTTRTIRNNISKIN---EATPNLIRSAKQGYQIN 60 Query: 63 IFERRSFFQLLQKHDNDDRLLALLLLNTF--TPRAQLASALNLPETWVAERLPRLKQRY- 119 + +LL L+ N+ +LA L + E + + + +LK Sbjct: 61 QRIPFELQTESDVTERKSKLLLELIKNSTKGVDLFELADILYISEVTLKKDIQQLKNELK 120 Query: 120 -ERTCCLASRPGLGHFIDETEEKRVILLANLLRK----DPFLIPLAGITR----DNLQHL 170 + S+ + I + KR +++ L + + I + + D LQ++ Sbjct: 121 EADVQIVTSKDRIKL-IGKERAKRKYMISLLYEEGGYRESIKIRIQEMIEFVSIDKLQNI 179 Query: 171 STACDNQHRWPLMQGDYLSSLI-LAIYALRNQLTDEWPQYPGD-------------EIKQ 216 + Q ++ ++ AI +R Q + + +I + Sbjct: 180 VKEVLTEESITTNQYSMMNIVLHYAISIVRIQQGNTLIETQKTLIRKHSKEYEISKKIAK 239 Query: 217 IVEHSGLFLGDNAVRTLTGLI--------------EKQHQQAQVISADNVQGLLQRVPGI 262 I+ A GL+ + Q + ++ +L V Sbjct: 240 ILSEEYQIHFSEAETKQLGLLYVGLQNEQSANANHGELDQFVDKKIIEALKSVLANVEET 299 Query: 263 ASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 +++ + QL + H+ + A R S+ ++K ++P FD++++ +LL+E+ Sbjct: 300 YLIDLQNEQLFIKLAIHVQSLYYRSRYKAYTRNLSLLDIKTSYPVTFDIAVYISSLLQEK 359 Query: 323 LDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIA 380 L I + + I L+ LE + + + + +++ Sbjct: 360 LAIDFNEDEISFIALHIGSFLESENRDYIRLEIGLLIEDYHDLRTNMLKKLRARFENEAT 419 Query: 381 RSLSELVAIREEIEPLLIINNSHYLLDDAVNNY----ITVKNIITAAGIEQIKHFLATAF 436 L E E + +L N L T + I+ K L Sbjct: 420 IKLIENEDSEENFDIILTTNRDIALEKAGSIFIHPLLTTKDIKKISNRIQTKKKILENHL 479 Query: 437 IRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENL 496 QQ +R+ + + + I Q+ +++ Q +T + +++ RE Sbjct: 480 RGQQIDRYIVRSLYANQIDPSELTPAKIREQMISKMEKQTFVTPEFKEKVEKRERMAPTS 539 Query: 497 IVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLAS 556 + +AIPH + +TL +P+ N+ I + + + E F Sbjct: 540 FPSGIAIPHSIKNDALQSGVSIMTLQEPIYWNDVKIKIIALVAISKKDATEFNDFFEKFV 599 Query: 557 ILCQHP--AEIIAGLTGYEAFMELL 579 + P + ++ +E F++ L Sbjct: 600 EIVSEPINTKRLSMAESFEEFIQKL 624 >UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9P7_9ACTN Length = 648 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 102/640 (15%), Positives = 227/640 (35%), Gaps = 80/640 (12%) Query: 10 VDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSF 69 + ++E + P ELA+ GVS RT+ + +N +L G A I + GY + + + ++ Sbjct: 10 LHIMEHEGIKPAELAEAFGVSVRTVRNHVQAVNRSLEGVASIDLARGRGYTVSVADEQTL 69 Query: 70 FQLLQKHDNDDR-------------LLALLLLN-TFTPRAQLASALNLPETWVAERLPRL 115 + ++ R LL LL + LAS L + T ++ L ++ Sbjct: 70 DAIFEQARKQRRASLPQTAEARVSYLLNDLLSRSDYIAIDTLASVLYVSRTSISNDLKQV 129 Query: 116 KQRYER-TCCLASRPGLGHFIDETEE-KRVILLANLLRKDPFLIPLAGITRDNLQH---- 169 ++R + + R G + +E KR+ L + + L A ++ D + Sbjct: 130 EERLAQFGLAIDRRSHHGIKVIGSEMAKRLCLASLAMEGSDELKGAARLSVDAEAYRALF 189 Query: 170 -------------------------------LSTACDNQHRWPLMQGDYLSSLIL-AIYA 197 ++ + + M+G+ L+ + + Sbjct: 190 DVVSDCVDDVTTEERFAINSVAYRNLITHIVIALLRIREGCYVPMEGEQLTEIRKSPSFP 249 Query: 198 LRNQLTDEW-----PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEK-QHQQAQVISADN 251 + +++D P +E+ I H + L G + Q+A ++ +D Sbjct: 250 IARRISDSIGARTGVVLPDEEVAYIAIHL-------TGKRLLGDFDAGDDQEAGLVISDE 302 Query: 252 V----QGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 V G+L V ++ D +L N+ HL+ + ++K+ +P Sbjct: 303 VWDAVTGMLDAVWRTFRFDLRHDLELRMNLARHLVPLEVRLHHHLHLDNPILGDIKSRFP 362 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSDQNAIA 361 A+ M++ + L + L + + I L FA ALER + +++ +++ + A Sbjct: 363 LAYSMAVEAGSSLAAHYEAELSEEEIGYIALSFALALERQKTDAPKKRILVVCASGAGSA 422 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + + ++ + I + V + + + V V + Sbjct: 423 RLLEHRYRQEFGSYVEHIETCDAAHVRFVDFSRIDYVFTTVPLAEEVPVPVR-QVGYFLD 481 Query: 422 AAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 AA + ++ L + R F +++ + + + + + ++ D Sbjct: 482 AAEVSDVREILLSDSRRSDARPLFCEELFLPHASCS--TPEEAIELLVGEASRVYDLSPD 539 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA 541 + RE NR+A+PH + + +P+ + V + A Sbjct: 540 FLDLVYRREQAAPTAFGNRVAMPHPLEAASTQSFVALALIDEPIIWGGREVQAVFLVSIA 599 Query: 542 ADARHELKIFSYLAS--ILCQHPAEIIAGLTGYEAFMELL 579 DA + F S +L + + + ++ +EL+ Sbjct: 600 RDATDVSEGFFSAMSELVLSEAFIDRLLSERSWQTLIELV 639 >UniRef50_D1P1R2 Transcription antiterminator, BglG family n=5 Tax=Enterobacteriaceae RepID=D1P1R2_9ENTR Length = 645 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 100/633 (15%), Positives = 221/633 (34%), Gaps = 63/633 (9%) Query: 2 LNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQ 60 + +R +I + + ELA+ VS RTI DI+ +N + + GY+ Sbjct: 5 IQQRHNQIFSRILNEVVPQDELAKLFSVSTRTIRSDINEINELIEAHSAHIVYERGRGYR 64 Query: 61 LEIFERRSFFQLLQKHDNDDRLLALLLLN------------TFTPRAQLASALNLPETWV 108 L+I F Q++DN+ + +A + + + Sbjct: 65 LKIENAEQFSAFTQQNDNNSNIPRTSKERIDALLLKLLMLSLPVKLDDIAEEWFVSRSTI 124 Query: 109 AERLPRLK-QRYERTCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLI--PLAGITR 164 + + ++ ++ L S P G + +E R + L R+ I LA Sbjct: 125 QQDMGAVREHLHKYQVQLESIPHQGIRLSGSEWAIRACMTEALWRQFIEQITPDLATFHP 184 Query: 165 DNLQHLSTA-CDNQHRWPLMQGDYLSSLI--------LAIYALRNQLTDEWPQYPGDEIK 215 D + +L D + + D S A+ LR E + Sbjct: 185 DCIDNLDLTYIDKVIHNSMNRFDIRISNEGHLYLVFNCAVTILRITRGHELTVNTKNNAV 244 Query: 216 QIVEHSG---------LFLGDNAVRTLTGLIEKQHQQAQVISADNV-----------QGL 255 + V + FLG++ + Q ++ + D+ + + Sbjct: 245 EEVINKACDEISKGLIYFLGNDLSHAELNFLHDQIIAQRINNQDSTTQKSGSHNALSEHI 304 Query: 256 LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 L + + ++ D +L +++ HL + + ++++K +P A+D++L Sbjct: 305 LNYINDRYNYDLRSDEKLKKDLNTHLSSLITRLQYHISTPNPLLSDIKQYYPFAYDVTLS 364 Query: 315 FITLLREQL-DIPLFDSD--LIGLYFACALERHQN----ERQPIILLSD-QNAIATINQL 366 +T + L P+ + + + ++ +LER+ + +++++D N+ + + Sbjct: 365 ALTSASKHLLPYPVNEDELGYLAVHIGVSLERNYGAGSMRQTEVLVVTDAGNSTFRVVES 424 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 I R+ + +L E ++ E E +I + V + Sbjct: 425 KIMREFPQLKFSRGLTLQEYESLSEVSEDFVITTVRISEKNKPVIKIAPFPTPYQLEQVG 484 Query: 427 QIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 ++ T ERFF F S + + + +C++L + ++TA+ + Sbjct: 485 RLAMVDQTRPY--IIERFFDER--FFMVINEKISQEALFQTVCSKLQQEGYVTAEFYPSL 540 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVIN----HVLIACAAA 542 RE L+ +A+PH + I + +E N E L+A + Sbjct: 541 QERESIVSTLLGEGIALPHSLGLLANKTVVVTILAPKGIEWNKETKENAYVIFLLAISKT 600 Query: 543 DARHELKIFSYLASILCQHPAEIIAGLTGYEAF 575 D + I+ + + + + + + F Sbjct: 601 DYEEAMAIYDLFVTFVKEKTTRRLVNVKNFNEF 633 >UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFS9_9FIRM Length = 643 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 94/636 (14%), Positives = 214/636 (33%), Gaps = 75/636 (11%) Query: 2 LNERQLKIVDLLEQQPR--TPGELAQQTGVSGRTILRDIDYLNFTLNG-KARIFASGSAG 58 + R++K+++LL + R T ELA+ VS +TI +DI + L + + + G Sbjct: 1 MLLREMKLLELLAKDDRVYTTVELAKMLHVSTKTIKKDIKNIKEELKTPECHLHSQAGKG 60 Query: 59 YQLEIFERRSFF--------QLLQKHDNDDR----LLALLLLNTFTPRAQLASALNLPET 106 L ++ + F + + ++R LL LL ++ +A L + + Sbjct: 61 VWLTCSDQGNVFIKSLLSDIRPICSDAPENRKYHVLLKLLQAPSYLSMESIADTLYVSKG 120 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT-- 163 V + + E+ + + G + E + I ++ K L+ L G Sbjct: 121 TVVNDVNEIIPFVEKQGLTMEKKAKYGVRVLGKESRIRIAECAVISK---LVRLQGNGLL 177 Query: 164 --------RDNLQHLSTACDNQHRWPLMQG--DYLSSLILAIYALRNQLTDEWPQYPGDE 213 +LQ + T + + +++++ ++ + P + Sbjct: 178 TKLVPFFEETDLQEIHTILHDMEDDYGFTFADSSYAEMMISLAITVERVRNGNVCCPTEG 237 Query: 214 IKQIVEHSGLFL--------GDNAVRTLTGLIEKQHQQAQVISAD------NVQGLLQRV 259 + + + E+ + ++ A + ++ V Sbjct: 238 ELNGYRQKNQWSMAGHMARKLEQEFHIVMDEGEQAYITMNLMGAKLQNRPMENKAVISGV 297 Query: 260 PGIASLNII--------------DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAW 305 I L+ I D L + HL +K Sbjct: 298 RDIQKLDEIMKAAGDVFHEDILGDQLLRNTLYMHLEGMFNRLNHQMHLDNPIKQMVKDEL 357 Query: 306 PAAFDMSLHFITLLREQLDIPLFDSDL--IGLYFACALERHQ-----NERQPIILLSDQN 358 F+++ + L+ EQ L D ++ I LY + ER + +I Sbjct: 358 AYEFEIATYIAGLIAEQFGTGLGDDEICDIALYLGASFERRKISDVLVAPTVVIACGTGM 417 Query: 359 AIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKN 418 + + ++R + + +S + + E+ +I+ LD N I V Sbjct: 418 GTSLFFEARLKRVFPDITIRRVLPVSRIREVLEQETLDCVISTVPLALDG--INVIQVSP 475 Query: 419 IITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRG-------ESWQHITRQICAQ 471 ++ IE ++ L + S P + N + ++ + + + + Sbjct: 476 VLNDKDIEVLRKALYPGKNEKMASSGNSYPNLWAMLNEKITILNCDCKTAEEVIVLLGQR 535 Query: 472 LVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV 531 ++ + ++ + + ++ RE I AIPH + + +TL +PV E Sbjct: 536 MIQEKYVDSGFIESVLKREKLAPTSIGGMFAIPHAFEGHVIKQGIGLMTLRKPVIWGEER 595 Query: 532 INHVLIACAAADARHELKIFSYLASILCQHPAEIIA 567 + +L+ ++ +L+I + L + A + Sbjct: 596 VQIILMLSVDVNSTSKLRIIFEELADLTKDTAVVRQ 631 >UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotransferase n=2 Tax=Selenomonas RepID=C4V3X4_9FIRM Length = 644 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 105/632 (16%), Positives = 228/632 (36%), Gaps = 61/632 (9%) Query: 4 ERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAGYQ 60 ER +I+++L P T LA+ VS RTI DI L L N + I A+ GY+ Sbjct: 10 ERCRQILEVLINNPEGMTGETLAKHFDVSSRTIRSDIKMLQTQLSNCRTEILAAPKRGYR 69 Query: 61 L-----------EIFERRSFFQLLQKHDNDDRLLALLLL----NTFTPRAQLASALNLPE 105 + + + L++ D + +++ L N + LA + + Sbjct: 70 IVQEESTADLVKLVDDESGQVGLIRTEDQQNYIISRFLECCLKNVSVTQMMLADEMYVGL 129 Query: 106 TWVAERLPRLKQRYE-----------RTCCL-----ASRPGLGHFIDETEEKRVILLANL 149 + + L ++ ++ + R ++ E ++K++ + Sbjct: 130 STIKSYLNSTRKHFDAYNIHIVQYKTEGLRIEAAEGTLRSFFVDYLHEVQDKKLCHILFE 189 Query: 150 LRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSL-----ILAIYALRNQLTD 204 + + N++ L +H + + I ++ +L D Sbjct: 190 RITYDQMEEILSQA-GNVRRLQLTDSARHDLAVQTALSIQRSLTGHGIECSSSMAQKLED 248 Query: 205 EWPQYPGDEIKQIVE--------HSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLL 256 + EI + +S +F + T L++ + V+ +L Sbjct: 249 TFEYSAAKEILNKILNSIGVDIPYSEVFYLTQCLLTGKKLLDAGSGVNDEHVKELVEKVL 308 Query: 257 QRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 V L+ D L + + HL +A + R ++++K +P AF ++++ Sbjct: 309 VDVDKKFGLDFTADEYLKDGLALHLRIAIARVNFHVNIRNELLSSVKQDYPLAFQIAVYA 368 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERH----QNERQPIILLSDQNAIATINQLAIE 369 L+R+ I +++ I L+F A+ R+ + + + + ++ ++ A Sbjct: 369 AKLVRDIDHIEFNENEIGYIALHFCAAMSRNSIAEEEQPKNVYVVCSAGLGVSVLMKAKL 428 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 ++ + + + + E+++ S L + I V +++ IE+I+ Sbjct: 429 KEHFRSSIHVI-DILPAYKLTEKMQEEADYIISTVPLPSNSSKIIRVNHMLRTDDIEKIR 487 Query: 430 H--FLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 F + + R F P F+ + + + + V + A+ + Sbjct: 488 RILFKQASTLDANVVRQFFRPEGFYVDQL-FHTRDECLNFLTDEAVRNGWMDAEGKSSVF 546 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA-CAAADARH 546 RE I + +AIPH + + L +PV+ + + V + + A Sbjct: 547 EREHMSSTAIGDFVAIPHALLTEHMISNISVLILKEPVQWEDFPVRVVFLLNIEQSKASL 606 Query: 547 ELKIFSYLASILCQ-HPAEIIAGLTGYEAFME 577 K+F L S + + H E + YE FME Sbjct: 607 WEKMFLKLYSFIKEYHGLESLLKHKSYEQFME 638 >UniRef50_A5CU91 Putative transcription antiterminator containing a PTS domain n=2 Tax=Clavibacter michiganensis RepID=A5CU91_CLAM3 Length = 662 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 109/665 (16%), Positives = 224/665 (33%), Gaps = 95/665 (14%) Query: 1 MLNERQLKIVDLLEQQPR--TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML+E +++D L R GELA + GV+ R++ + + A AS G Sbjct: 1 MLSENHERLLDYLSTADRWVEAGELADRLGVTTRSVRTYVQAVR---ERSAVSIASSPDG 57 Query: 59 YQLEIFERRSFFQLLQKHDNDDR-------LLALLLLNTF-TPRAQLASALNLPETWVAE 110 Y+++ D L+ L LA L++ ++ V Sbjct: 58 YRIDAGSYARHLGARPTGDPQGTPRDRLHALVRRLGDAPDGLDVFALAGELHVSDSTVEA 117 Query: 111 RLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF--LIPLAGITRD--- 165 L +++ E R G ++ +E LL+ + R + +PL + R+ Sbjct: 118 DLRKVRALVEDAGLALRRTGSTVVLEGSERDFRRLLSRMFRDESAQGFLPLETVQREFAS 177 Query: 166 ----------------------------NLQHLSTACDNQHRWPLMQG---DYLSSLILA 194 L H++ A D R P G D + A Sbjct: 178 DSLRAFKTDLVRELTEGGFFVNEYGVDNVLLHVAIAIDRLARAPRRTGPGADQDPADDGA 237 Query: 195 IYALRNQLTDEWPQYPGDEIKQIVEHSGL------------FLGDNA-----VRTLTGLI 237 A D P + I + L GD A VRT Sbjct: 238 PGAAHPTADDASTAAPSADPTAIAIRAVLARLLAAHFDVPVPAGDVAYLALLVRTRVVTP 297 Query: 238 EKQHQQAQVI-------SADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWI 290 + A V+ D V+ +++RV +++ D + HL +A Sbjct: 298 GNEQSLATVMREHVVESDLDVVRAIVRRVKQEYLVDLEDEDFTVRFSLHLGNLVARAADR 357 Query: 291 AEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER 348 + R ++K ++P +++++ + ++ + I + D + I L+ ER Sbjct: 358 SFSRNPLARSIKTSYPMTYEIAVFIASEVQRRRGIAINDDEIAYIALHVGSHRERVARRD 417 Query: 349 QPI---ILLSDQNAIATINQLAIERDV---LNCRVIIARSLSELVAIREEIEPLLIINNS 402 + ++ + + I + IE+ + ++ ++ R+ + A+ ++ Sbjct: 418 DRVACALVCPNYYDLHQIMRQRIEQALGADISVDAVVTRTDVDADALGVQL------VID 471 Query: 403 HYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERF-----FSAPGSFHYSNVR 457 +N + V+ + T IE I+ +A + S + ++ Sbjct: 472 ATGSRPPADNVVVVQPLPTPDDIESIRRAVARVRRHARRSSMKHDLLRFLDESLFFRDLY 531 Query: 458 GESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGF 517 + + + R + ++V Q I + I RE + LA+PH + R Sbjct: 532 APNEEAMIRLLGGKMVEQGIIEPEYIDGAIERERLSSTAFTDTLAVPHSLAMTAHRTAIA 591 Query: 518 FITLAQPVEVNNEVINHVLIACAAADARHELK-IFSYLASILCQH--PAEIIAGLTGYEA 574 + + ++ ++ V + +A R + +F + H I+ + + Sbjct: 592 IVVNDEAMQWGGNRVHVVALVAFSASGRTSFQHVFDQFVEVFSDHRDVQAIMRASGSHGS 651 Query: 575 FMELL 579 F+E L Sbjct: 652 FIEEL 656 >UniRef50_B0NY60 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY60_9CLOT Length = 543 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 145/371 (39%), Gaps = 22/371 (5%) Query: 221 SGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGH 279 S + TL+ + + ++ D V +L+ + I +++ D ++ E++ H Sbjct: 176 SKFIGISDVDVTLSQVKKYDNKLV-----DFVDRMLKVIRDILDVDLTSDEKVKESLIIH 230 Query: 280 LLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYF 337 L + + + + ++ +K + F S L E + + + + I LY Sbjct: 231 LRPTIFRLRYGTPQKNALIDFIKKEYKNVFRASWAISILFEEYYGLQITEDEIGYIVLYI 290 Query: 338 ACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLL 397 A+ER +++ + +++ + + + I++ V I S+ + I + + + Sbjct: 291 QAAIERKKHQYRTVMVSNFNMGHTQLVKEKIKKSVPEIDEIKFVSIHD-FKIADYEDYDI 349 Query: 398 IINNSHYLLDDAVNNYITVKNIITAAGIEQIK-HFLATAFIRQQPERFFSAPGS------ 450 II+ D + + NI+ GI ++ H FI + FS Sbjct: 350 IISTEERKEKD--KRIVVIPNILNETGISTLRAHLDNMNFIMIENATPFSPECFILFSPE 407 Query: 451 FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQ 510 F ++++ ++ + + + + +H +T D ++ RE + I N +++PH Sbjct: 408 FIFTDLEVKTKEECLKIMSQAMEEKHVVTEDFYDSVMDRESKTTTTIGNGVSLPHGSPTA 467 Query: 511 ERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE---LKIFSYLASILCQHPAEIIA 567 + L P+ +NE + V + R E +++F L E + Sbjct: 468 VNESKVGIAILKNPIMWDNEQVQVVFLLAFRLSTRDEISRIQMFYKEYVTLID-SEEKLE 526 Query: 568 GLTGYEAFMEL 578 L ++ +EL Sbjct: 527 KLKSMKSNIEL 537 >UniRef50_C9XL63 Putative transcriptional antiterminator n=9 Tax=Clostridium RepID=C9XL63_CLODC Length = 592 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 96/599 (16%), Positives = 226/599 (37%), Gaps = 31/599 (5%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + RQ+ I+ +L + + L+Q+ G S +TI +I +N L + GY Sbjct: 5 ITARQINIIKILLNSKDTISGIALSQEIGCSSKTIQNEIKDINKQLRNGKILSI-RGVGY 63 Query: 60 QLE-IFERRSFFQ-LLQKHDNDDRLLALLL-----LNTFTPRAQLASALNLPETWVAERL 112 +LE F+ + L D + ++ +L LA ++ + + V L Sbjct: 64 KLEGSFDEVNLNSNLYDDVDRVEYIIRKILTLSNEEKNTIKLEDLADSMYVSVSTVKNDL 123 Query: 113 PRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLS 171 +K+ E+ + + S+ G + E+E+K + + +L K + L D+++ Sbjct: 124 KEVKRILEKYSISVKSKHKQGICVLESEDKILNCIVDLSNKRDNQLSLNDFLNDDIK--- 180 Query: 172 TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVR 231 + + + D L+ L + + + K + +N Sbjct: 181 ---ERKLLIKKLLLDILNENGLVLTDIEFKSVLNNILVMLSRHKYNEKEFIENYIENYRS 237 Query: 232 TLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVEN-ITGHLLRCLAAPVWI 290 + ++E + + +I++ ++ + + S++I + ++ E + H+ Sbjct: 238 KRSSILENEQNKEIIINS--IKTFCKNLKLATSIDISNDKVFEEFLYKHISSLCKKIKLG 295 Query: 291 AEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDL--IGLYFACALERHQNER 348 ++K +P AF+++ + + L I + + ++ I L+ A+ER Sbjct: 296 INQSPIMAQDIKIKYPFAFELANIAKKTIEKDLKIEINEDEVANIALHIGGAVERASYNN 355 Query: 349 Q-----PIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSH 403 + II+ + + + + +E I+ S LV + I+ +I+ Sbjct: 356 KDKVFKTIIVCTSGIGTSMLIKAKLENIFKEKLEILKIIPSYLVEYIKVIDVDFVISTVP 415 Query: 404 YLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQH 463 + D I I++ I I+ ++ T I + ++++ + + Sbjct: 416 IEVGDVPVINI--SPILSEKEIRLIEKYIETGNIYLDLDIKSLFDSELFFTDLVFKRKEE 473 Query: 464 ITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQ 523 + + ++LV + +I D + RE I N + IPH + + L + Sbjct: 474 VIDFMASKLVQKGYIDEDMKKSYFEREKIATTEIGNMVTIPHGAIGKIFDNKIAIGILKK 533 Query: 524 PVEVNNEVINHVLIACAAADARHELK-IFSYLASILCQHPAEI-IAGLTGYEAFMELLH 580 P+ + +++ D + + IFS + + I I + +E F+ L + Sbjct: 534 PISWEISDVRLIIMLALDKDKILDYEVIFSKIYKRVDSIAKVISICENSSFEKFVNLFN 592 >UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N6K6_9FIRM Length = 644 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 102/633 (16%), Positives = 221/633 (34%), Gaps = 58/633 (9%) Query: 5 RQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSAGYQLE 62 R +I D + Q + +L+ ++ RTI DI +N L AGY +E Sbjct: 7 RLNEIFDYVRQDNIVSASQLSVLLNITDRTIRSDIQAINEILEKNGAKIKLKRKAGYYIE 66 Query: 63 IFERRSFFQLL--------------QKHDNDDRLLALLL-LNTFTPRAQLASALNLPETW 107 I ++ + L D LL LLL + + LA + + + Sbjct: 67 INDQEKYNTFLCSIKQTRTSNLELDSSQDRIKYLLNLLLYSDEYMSLDDLADNIYVSKNT 126 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEE-KRVILLANLLRKDPF---------- 155 + + LK + + S+ +G I E+ KR L+ N+L + Sbjct: 127 LQNYIKTLKAIFSKYNLEYISKTNVGVKIIGNEDDKRKCLVENVLSYNFQNYVTGFTKDE 186 Query: 156 ----------LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRN---QL 202 L+ + H+ T N + +S + Y N ++ Sbjct: 187 YTLFEGIDLDLLKQIISNKLKNAHIKTNDFNFKNLIIHFALMISRIQFDCYINTNNTIKI 246 Query: 203 TDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN-----VQGLLQ 257 D + + D +I + + + + + + Q ++ DN V+ LL Sbjct: 247 DDNYTDFIDDIANEIEYTFNITISEGEKKYIYSHLVANTQLNDLVDNDNKIKELVEELLN 306 Query: 258 RVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 + + ++ + + L ++ H L + R +N +K +P AFD++L Sbjct: 307 NIYFDYNFDLRNDEILSHDLFLHFKSILNTKSFALNKRNPLLNTIKTNFPLAFDITLTCT 366 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSDQNAIATINQLAIERD 371 + + L + + + L+ A+ER + + + +IL+ T A Sbjct: 367 AKIFNKPPYILTEDEVGYVSLHIGAAIERCFSGSLQNKSVILVCGSGQATTRMLEARLNV 426 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNY--ITVKNIITAAGIEQIK 429 ++ I R S I LL I+ + + ITV + IE I Sbjct: 427 FFKDKITIVRKASYNEFINYTKRELLNIDFVISTIPLKSEHIPTITVDFALNNQDIEAIS 486 Query: 430 HFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 FL + + + + + +S + + +Q+C + Q+ + ++ ++ R Sbjct: 487 KFLTSISLNKMKKSNKFFDKNLFIHLDGIDSKESLLKQMCQLMEKQNIVDSNYFDCVMER 546 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHEL 548 E + + A+PH + + + +P+ + + + + + ++ Sbjct: 547 ENLAKTNMNEVFALPHPMRLCAKDTKVAVAIIDKPLTWYQQDTVQIIFLLAIKQGDQQDI 606 Query: 549 KIFSYLASILCQHP--AEIIAGLTGYEAFMELL 579 + + + + + I Y++F+ L Sbjct: 607 EHLYDIFIEIVNNAKLQQSIIHSYNYDSFINNL 639 >UniRef50_UPI000196BD9B hypothetical protein CATMIT_02553 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BD9B Length = 639 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 99/624 (15%), Positives = 214/624 (34%), Gaps = 73/624 (11%) Query: 19 TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQK--- 75 T +LA VS RTI DI+ LN L G + AGY LEI + F L Sbjct: 21 TAAKLADLFKVSDRTIRTDINNLNNELQGASV-QLKRKAGYYLEIEDEEKFNSFLDSITS 79 Query: 76 --------HDNDDR----LLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE-RT 122 ++DR L LL + + LA ++ + + + + +K+ Sbjct: 80 KESDIVDLDSSEDRIHFILNKLLYSHDYISADDLADSVYVSKNTFSNYIKIIKKSLPLYN 139 Query: 123 CCLASRPGLGHFIDETEE-KRVILL--ANLLRKDPFL--------IPLAGITRDNLQHLS 171 +PG+G I E KR ++ + L + + I + + + L Sbjct: 140 LEYIVKPGVGIKIIGNESDKRDCIINETHPLNEYSTVSTFSKGEKIYYNDVEVNYIVSLL 199 Query: 172 TACDNQHRWPLMQGDYLSSLILAIYAL--RNQLTDEWPQYPGDEIKQIVEHSGL------ 223 N+H+ DY + +AL L D++ + + Sbjct: 200 INVFNKHKI--QTDDYKLKNLTTYFALMISRILNDDYISVMNNTEIPNNIKEIMNEICES 257 Query: 224 --------FLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQR----VPGIASLNIIDAQ 271 I I ++ L+ + + ++ D + Sbjct: 258 LSDYYDITITRGEKQYISLHFISNIKYNNNSIDDQSIHNLIDSFLEGIYKGYNFDLRDDK 317 Query: 272 LVEN-ITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDS 330 ++ + + H ++ E++ +N +K +P F++S ++ + P D Sbjct: 318 ILRSDLFYHFRTSISMMELHLENKNPLLNTIKTNYPLPFEISKTILSQSSNIITFPEDDI 377 Query: 331 DLIGLYFACALERHQN----ERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSEL 386 I L+ A+ER + ++ ++ A A + + + +V ++ + + LS + Sbjct: 378 GYIALHIGAAIERCFSGSIKKKAVYLVCGSGQATARMLEARL-HNVFANKLTVVKRLSLI 436 Query: 387 VAI------REEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT--AFIR 438 + +EI+ ++ ITV + IE + + + Sbjct: 437 EYLNCTENDFKEIDCVISTIPLEQSYVPT----ITVDFSLNQQDIEMVSRLITSIDQSKY 492 Query: 439 QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV 498 ++ ++FF + H + S + ++ L+ + I D + RE + Sbjct: 493 EKIKKFFDSSLFVHKK--KVNSKNELLEELSTLLLNEDIIGDDYLDSVYKREELSNTNMN 550 Query: 499 NRLAIPHCWSEQERRFRGFFITLAQPVEVNN-EVINHVLIACAAADARHELKIFSYLASI 557 + A+PH + ++ + L +P++ N E + V + ++ + Sbjct: 551 DVFALPHPLNVFAKQTKVAVAILDEPLKWNGDETVRIVFLLAIKNGDSLNMEHLYDVFIE 610 Query: 558 LCQHP--AEIIAGLTGYEAFMELL 579 L + + Y+ F++ L Sbjct: 611 LVNNTKFQREVMCSKTYDQFIKTL 634 >UniRef50_B0M974 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M974_9FIRM Length = 652 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 111/631 (17%), Positives = 209/631 (33%), Gaps = 78/631 (12%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAG 58 L RQ KI+ L ELA++ V+ RTI DI +N L I +S G Sbjct: 4 LPTRQKKILKKLMSLDGWVKGKELAEEMAVTPRTIRADIAAINVWLKTVGCYIESSRQEG 63 Query: 59 YQLEIFERRSFFQLL--------QKHDNDDRLLALLLLNTFTP---RAQLASALNLPETW 107 Y+L + LL + L LL +L + + T Sbjct: 64 YRLRGERQGELESLLWDGMDVPLTPQERMRALGIRLLQADEEKPEDVDELEEEMFVSRTT 123 Query: 108 VAERLPRLKQRYER--TCCLASRPGLGHFIDETEEKRVILLANLL--RKDPFLIPL---- 159 + + ++K E T R G + EE R LL L+ R DP + + Sbjct: 124 LESGIFKIKAMLESRTTPMYVKRNGRKIWTYGEEETRRFLLKELMVDRTDPDYLMIENYD 183 Query: 160 -----------------------AGITRDNLQHLSTACDNQHRWPLMQGDYL--SSLILA 194 +T +++ HL + M +Y + IL Sbjct: 184 DYFGADIPEKMMNCVLNALADNEISMTAEDILHLVIYLSIKLTRVHMGYEYKNKTKDILT 243 Query: 195 IYALRNQLTDEW---------PQYPGDEIKQIVEHSGLF--LGDNAVRTLTGLIEKQHQQ 243 + L + + +E+ + LF +G A + E+ H + Sbjct: 244 SEDINWTLAETISGKVREEFSTELNEEELVDLAVQLSLFRLIGSEAEVRPAPIPEQSHYE 303 Query: 244 AQVISADNVQGLLQRVPGIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 V LL + L++ D +L + H+ L E + LK Sbjct: 304 F------VVNELLNDIKNKFHLDLTDDQELKAGLVTHIRYTLKRIRMEPESTNPVLMLLK 357 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP-----IILLS 355 +P FDMSL + + L +++ + Y A+ER + ++ P ++ Sbjct: 358 TEYPFVFDMSLFLYERFYDVFGVRLNENELGYVATYLGSAVERMERKKSPKDFTIAVVTG 417 Query: 356 DQNAIATINQLAIERDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYI 414 + + ++ + C + S+ + I + LI S +L + I Sbjct: 418 MNYGTSRLLTTRLKAIYGDICNIEGPFSIYAVNEIEKLKPTFLITTESKQVLKNFQVPKI 477 Query: 415 TVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYS-----NVRGESWQHITRQIC 469 + ++ +I +L ++ + + + N++ E+ + + R + Sbjct: 478 QISPLLNEKDQREINKWLLQMRKELMYDQLPRSIKDYFHRELFFYNLKAETPEKVIRTMS 537 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 L+ D A++ + RE + N++A+PH +R L QP+ + Sbjct: 538 EHLIRLDFAGEDFAEKTLMREQVASTIFGNKIAMPHPIEACAKRTVISVGILNQPILWGS 597 Query: 530 EVINHVLIACAAADARHELKIFSYLASILCQ 560 + + + L F L L Sbjct: 598 GQAQLIFMLAVKKEDMKYLNSFFDLTVRLVD 628 >UniRef50_A4AFC1 Transcription antiterminator, BglG family protein n=2 Tax=Actinobacteria (class) RepID=A4AFC1_9ACTN Length = 635 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 104/635 (16%), Positives = 229/635 (36%), Gaps = 62/635 (9%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ++ + ++++ L Q T +LA + GV+ R++ + + + I S +AG Sbjct: 7 LMLDNHARLIEHLAQAEGWVTAADLADKLGVTTRSVRSYVTAVKSSALPLEVIE-SSTAG 65 Query: 59 YQLEIFERRSF------FQLLQKHDNDDRLLALLLLNTF-TPRAQLASALNLPETWVAER 111 Y+L F + + D L+ L LA + + E+ V Sbjct: 66 YRLHRENYAEFLKSASIRETERPRDRQYHLVRRLGDAPDGVDIHALAESFFVSESTVEAD 125 Query: 112 LPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF--LIPLAGITR----D 165 L ++K + +R G + TE LL+ + R + + L I R Sbjct: 126 LRKIKASIAESGLTLTRRGSLVLLAGTEPNLRRLLSKMFRHEESQGFLELESIQREFESS 185 Query: 166 NLQHLSTACDN--QHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE-------IKQ 216 +L+ TA + ++ ++L + ++ + E P P Sbjct: 186 DLRSFKTALLELLDSHGYFVNEYGINHVLLHVAIATDRTSQEAPALPQSAPQFTNDLAAL 245 Query: 217 IVEHSGLFLGDNAVRTLTGLIE-------------KQHQQAQVISADNVQGLLQRVPGIA 263 I H G+ LG + + + L+ Q+IS V+ +Q V Sbjct: 246 ISTHFGVNLGRSDLNEIEVLLTTRVITRTADPEDASDVDLEQLIS--RVRRTVQHVGEEY 303 Query: 264 SLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 +++ D + ++ H+ + ++ R ++K +P +++++ ++ Sbjct: 304 LVDLDDDDFIMRLSLHVRNLILRAQDLSYSRNPMTRSIKTTYPMIYELAVFIAAEVQRDE 363 Query: 324 DIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQLAIER---DVLNC 375 I + D + I L+ LER + ++ + + + I + IE D L+ Sbjct: 364 GITIHDDEISYIALHVGSHLERQAKREVRLTAALVCPNYHDLHVILRERIETVLGDELHL 423 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 RV+I R+ +L E+ L++ +N + ++ +T A ++ I+ + Sbjct: 424 RVVITRTDVDL----AELTTDLVLTTIDLR--SFADNVVLIQPFLTEADVDSIRKTIGRV 477 Query: 436 FIRQQPERFFSAPGSFH-----YSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE 490 ++ F N S + + + +++ I I RE Sbjct: 478 RRLRRRRTLTDELLRFFDPALFLRNFTAPSEEAMIAALGHRMIEAGVIDHSYITGAIERE 537 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV-LIACAAADARHELK 549 + LA+PH + R + P++ +N + LIA +AA Sbjct: 538 RMSSTAFTDSLAVPHAMTMSAHRTAISIVINETPMQWGENRVNVIALIAFSAAGRTTFQT 597 Query: 550 IFSYLASIL--CQHPAEIIAGLTGYEAFMELLHKG 582 +F ++ + +++ + F++ L +G Sbjct: 598 VFDQFVTVFSDRDYVQQLVRKAVDFPTFIDELVRG 632 >UniRef50_Q5E1U1 PTS system, mannitol (Cryptic)-specific IIA component n=2 Tax=Vibrio fischeri RepID=Q5E1U1_VIBF1 Length = 640 Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 108/629 (17%), Positives = 211/629 (33%), Gaps = 77/629 (12%) Query: 9 IVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQLEIFERR 67 I + L + ELAQ+ +S RTI DI LN L GY +I++ Sbjct: 12 IFEALRYEALPQQELAQRCDISTRTIRTDISALNDILASYGAQIQHQRGKGYHFDIYDET 71 Query: 68 SFFQLLQK--------HDNDDRL----LALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 F + ++ + DR+ + LL LA+ + T + + + Sbjct: 72 RFLDIEKQTKKMKSSPRNAKDRMVYLMMRLLSQEEECKLDDLANQWFVSRTSLQADMGEI 131 Query: 116 KQRYER-TCCLASRPGLGHFIDETEEK-RVILLANLLRKDPF------------------ 155 +++ E+ L S+ G + E+ R + L + P Sbjct: 132 REQLEQYNLELISKAHCGLRLFGEEQAIRACIAHILFQFKPSDHTFIDVCEYFFPEINQP 191 Query: 156 -----LIPLAG-----ITRDNLQHLSTAC-------DNQHRWPLMQGDYLSSLILAIYAL 198 L+ L +T + L HL C + LS Sbjct: 192 SLKTDLLELINKNHIKLTDEGLHHLVVYCGVALHRLKQNACIHHVDQPNLSE---EAQKT 248 Query: 199 RNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQR 258 +L+ G + Q A R +TG+ E Q+ + Q LL Sbjct: 249 AAELSQTIESLLGAPLPQAEIDYLSI--QIAARRVTGVPEIDTQK-PTEQLELTQYLLDY 305 Query: 259 VPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 V + ++ D QL ++ H+ + + +++K +P A+DM++ I+ Sbjct: 306 VNTHYNYDLRNDEQLKRDLLCHITTMILRVKYQITIPNPLFDHIKRYYPLAYDMTVAAIS 365 Query: 318 LLREQLDIPLFDSDLIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIERDV 372 + L IP + + ++ LER+ Q + +++ +I + + + R + Sbjct: 366 HWGKHL-IPDGEIGYLVMHIGVGLERNFSLEEQLPPKALLVCDSGTSIVRLLESQLIRSL 424 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 + SL + + +++ +I+ + ITV I T+ +EQ+ Sbjct: 425 PQLTIEKVESLRDYEELS-KVDADFVISTEKVSQKNKPT--ITVSPIPTSFQLEQVNKL- 480 Query: 433 ATAFIRQQPERFFSAPGSFHYSNV----RGESWQHITRQICAQLVAQHHITADEAQRIIA 488 I + F + + + ++ A + + +I Sbjct: 481 ----ILMNRSHPYMLDKFFDHRYFSVLDEPMTQGEVLKKFSAHFTEDNITPIEFYDSVIE 536 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV--LIACAAADARH 546 RE ++ +AIPH + + I V+ N I HV L A D Sbjct: 537 RESITSTILGEGIAIPHSLGLLANETKVYTIISPHGVDWGNGKIAHVIFLFAINKDDYEE 596 Query: 547 ELKIFSYLASILCQHPAEIIAGLTGYEAF 575 + ++ + + + I G Y+ F Sbjct: 597 AMSLYDLFVTFMNGKAVDTILGCHSYDEF 625 >UniRef50_A8RJT7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJT7_9CLOT Length = 649 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 91/627 (14%), Positives = 199/627 (31%), Gaps = 50/627 (7%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 + RQ +I DLL + T ++A +S RT+ DI +N + GY Sbjct: 23 MTARQKRIWDLLAEHDCLTSQQIAALLHISDRTVRSDIKEINGEHASEVIRS-KKGQGYF 81 Query: 61 LEIFERRSFFQLLQKHDNDDRL----LALLLLNTFTPRAQLASALNLPETWVAERLPRLK 116 ++ + + +D L + +L TP +LA L + +T +++ + L Sbjct: 82 IDAGQPEKNVPASKPQRPEDDLEWAIIRQVLFCRETPYLELAEELFISDTLLSKIVSELN 141 Query: 117 QRYER------------TCCLAS-----RPGLGHFIDETEEKRVILLANL--LRKDPFLI 157 + R LA+ R +I + L Sbjct: 142 RNITRRHSLPAILKQNGILSLAASEEEKRSYYTLYIMNRNVNHYFDMEQFQPFFDIVDLK 201 Query: 158 PLAGITRDNLQHLSTACDNQHRWPLMQGDYL--SSLILAIYALRNQLTDEWPQYPGDEIK 215 L + L LS + L+ + + + Y + Sbjct: 202 ELKELMFRELDLLSRHLYDTTIVRLIIDTAVMAERAVCGFFMPETPSVTPETPYGKSSEE 261 Query: 216 QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNV---------------QGLLQRVP 260 V FL + R +++ + ++ + +L + Sbjct: 262 GAVNTGRHFLEELGSRLFISFPPSEYEYFSRLFQNDFYYVREQPDSQAESLLEKILIEIN 321 Query: 261 GIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 + D +T L L ++ +K+ +P +D+++ F Sbjct: 322 VEYGFDFTVDKNFCHEMTEQLHGALERRRHRQHVINPVLSTIKSKYPLEYDIAIFFADRF 381 Query: 320 REQLDIPLFDSDL--IGLYFACALERHQNE-RQPIILLSDQNAIATINQLAIERDVLNCR 376 + I L + ++ ++F A+E + Q + L++ + D+ CR Sbjct: 382 KNLSGISLSEDEISLFAIHFIRAMETNLGRTEQRVGLINPYGKQIKELMVKRLGDMGECR 441 Query: 377 VIIARSLSELVAIREEIEPLL-IINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 IA + S E + +L ++ + A I +N + E++ + + Sbjct: 442 FQIAYTWSVFDYPHEMPKDILAVLTTVPLPVQPADVPVILCRNFLNYHEKEKLLTVVRDS 501 Query: 436 FIRQQPERFFSA-PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE 494 + F + S ++++ +S + +C +L Q ++ + ++ RE Sbjct: 502 EVNSIRTYFRTLFKPSLFFTDMEFDSRRSAVAFLCGKLREQGYVGPGFLESVMQRESIAP 561 Query: 495 NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE-LKIFSY 553 A H +R L + + + + A H + I++ Sbjct: 562 TAFEPGFAFAHAMENNAKRTAVCVCVLKNKLPWGEYNVKIIFLFALAPTWNHTIIPIYNV 621 Query: 554 LASIL-CQHPAEIIAGLTGYEAFMELL 579 + L + +A + FM+LL Sbjct: 622 MIDNLFKTNTIYKLAKIRDCRQFMDLL 648 >UniRef50_B6EP62 HTH-type transcriptional regulator n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EP62_ALISL Length = 656 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 94/624 (15%), Positives = 216/624 (34%), Gaps = 59/624 (9%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQLEI 63 R I + L +P ELAQ+ +S RTI DI LN L GY +I Sbjct: 24 RLNTIFEALRHEPLPQQELAQRCDISTRTIRTDISALNDILASYGAQIQHQRGTGYHFDI 83 Query: 64 FERRSFFQLLQK--------HDNDDR----LLALLLLNTFTPRAQLASALNLPETWVAER 111 ++ F + ++ + DR ++ LL LA+ + T + Sbjct: 84 YDEARFSDIEKQTQKMKTSPRNAKDRVVYLIMRLLSQEEECKLDDLANQWFVSRTSLQAD 143 Query: 112 LPRLKQRYER-TCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGITRDNLQH 169 + +++ E+ + S+ G + E+ R + L + P + Sbjct: 144 MTEIREILEQYNLEIVSKAHHGLKLFGEEQAIRACIAHVLFQFKPSDRTFINVCDHFFPE 203 Query: 170 LSTACDNQHRWPLMQGDY-----------------------LSSLILAIYALRNQLTDEW 206 ++ + L+ ++ L+S+I ++ + + Sbjct: 204 INLPSLKEDLLTLINQNHIRLTDEGLHHLLVYCGITLHRVKLNSVIHHVHQPKISNEAQN 263 Query: 207 PQYPGDEIKQIVEHSGLF-------LGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRV 259 + +++ + L A R +TG+ ++ + LL V Sbjct: 264 AALDLSKTIEVLLSAPLPQSEIDYLSIQIAARRVTGVTIVDTEK-HTEQLELTHFLLDYV 322 Query: 260 PGIASLNIIDAQLVEN-ITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 + ++ + +L++ + H+ + + ++++K +P A+DM++ I+ Sbjct: 323 NEHYNYDLRNDELLKRDLLCHITTMILRVKYQITIPNPLVDHIKRYYPLAYDMTVAAISH 382 Query: 319 LREQLDIPLFDSDLIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIERDVL 373 + L IP + + ++ LER+ Q + +++ +I + + + R + Sbjct: 383 WGKHL-IPDGEVGYLVMHIGVGLERNFALEEQQPPKALLVCDSGTSIMRLLESQLLRSLP 441 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLA 433 + S+ E ++ +++ +I+ + IT+ + T+ +EQ+ + Sbjct: 442 QLDIQKIDSVREYESLT-KVDADFVISTEKVSQKNRPT--ITISPLPTSFQLEQVNKLIL 498 Query: 434 TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 F F + + + ++ A + + +I RE Sbjct: 499 MNRSHPYMLDKFFDQRYFSVLS-EPTTQAELLKKFTAHFTEDNITPIEFYDSVIERENIT 557 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV--LIACAAADARHELKIF 551 ++ +AIPH + + I ++ N I HV L A D + ++ Sbjct: 558 STILGEGIAIPHSLGLLANETKVYTIISPHGIDWGNGKIAHVIFLFAINKDDYEEAMSLY 617 Query: 552 SYLASILCQHPAEIIAGLTGYEAF 575 + + + I YE F Sbjct: 618 DLFVTFMNGKAVDTILECLSYEEF 641 >UniRef50_D1YCX5 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Propionibacterium acnes J139 RepID=D1YCX5_PROAC Length = 630 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 102/621 (16%), Positives = 201/621 (32%), Gaps = 69/621 (11%) Query: 16 QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFER----RSFFQ 71 P +LA GVS RT+ D+ +N I S + GY +E + Sbjct: 20 HPIKGTDLAGLLGVSTRTLRYDVARINGISRDN--IIESTTNGYSVEQSVYTGVVARNSE 77 Query: 72 LLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE-RTCCLASRPG 130 + ++ +R+L LL T + L E+ + L RL+ ++E + L+ R G Sbjct: 78 FSTQLEHHERILLYLLNTPDTTIYDVMRDCYLSESVIKASLKRLEPQFEEHSLHLSLR-G 136 Query: 131 LGHFIDETEEKRVILLANLLRK-----------------DPFLIPLAGITRDNLQ----- 168 +D E L +L+ D L + + ++L+ Sbjct: 137 SSIHLDGNEIYFRNFLGSLVNTAMDAVVGQNDKVNRYLPDVRLGDIENVVVESLRDYYLE 196 Query: 169 ----HLS------TACDNQHRWPL-------MQGDYLSSLILAIYALRNQLTDEWPQYPG 211 LS C ++R+P+ + S ++ L L +P+ P Sbjct: 197 IDDIRLSNMVVNIAICVQRYRFPIEDNAAIDLMMSNQSEMLCD--QLLVGLRKLYPERPL 254 Query: 212 DEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQ 271 S + E H V L L I + Sbjct: 255 SSADDAYLRSIVGATLGFGH-----GELDHHSDSCDIYSTVSRCLDDTVEHFGLVIAKEE 309 Query: 272 LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD 331 L +I+ H+ R +A + R + +L++ P +D +++ L L I D + Sbjct: 310 LYGSISKHVGRLMAHAPSMPYFRNTLRESLRSRSPFLYDAAVYLADKLSRLLGIFFTDDE 369 Query: 332 L--IGLYFACALERHQNER--QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELV 387 + + +Y E N +++ A+ + LA D R+ + +S + Sbjct: 370 IGLLAIYIGLYSEPAPNPNLVTAVVICPRYQALRDVL-LAGLVDHFADRMRVVDIVSSVA 428 Query: 388 AIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSA 447 ++I + + +++ + I L A ++ SA Sbjct: 429 EADTCDGDIVISTTEEPSHRHTC---VPISALMSDLDLSAIDSVLLRASEKKSRIATASA 485 Query: 448 PGSF-----HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLA 502 F ++ +SW+ +C + + + + RE + A Sbjct: 486 MKRFLDPTLFFTGRSFDSWRETLDFMCGSMERNGIVPDAFRESVFLREEYPSTVFFRTFA 545 Query: 503 IPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY-LASILCQH 561 +PH + + + P+ ++ VL+ + F L S+L Sbjct: 546 VPHAMDFLAYETKIAVLIPSTPINWETSDVSLVLLLAINEGDYDDFVRFYQPLISVLYDR 605 Query: 562 PA-EIIAGLTGYEAFMELLHK 581 + ++ Y FM+ L K Sbjct: 606 ELFTELRSMSSYHEFMKFLDK 626 >UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=Clostridium difficile RepID=Q184K6_CLOD6 Length = 656 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 101/662 (15%), Positives = 214/662 (32%), Gaps = 100/662 (15%) Query: 1 MLNERQLKIVD-LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 M+ R++KI+ LL++ T +A VS +T+ + + + L Sbjct: 7 MIQNREIKIIKFLLKEGHTTVKAIADDLDVSEKTVSKSLKEVEAVLKKIGLSLIRKPK-- 64 Query: 60 QLEIFERRSFFQLLQKHDNDDRLL-------------ALLLLNTFTPRAQLASALNLPET 106 + ++ ++L DN + LL N + QL+ L + Sbjct: 65 -IGVYIDGDLKKILPYLDNKGSQIPTTREERVIYIYSVLLKSNDYITIQQLSDELYISRG 123 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRK------------- 152 + L +++ + + +P G ++ +E + L A + K Sbjct: 124 TIERDLAEVEKLLKNEGISIYKKPSKGIKLNISERDKRQLTAKFIHKFWSRNWYIKQEQE 183 Query: 153 ------------------DPFLIPLAGITRDNLQ----------------HLSTACDNQH 178 + L + I R+ + HL+ A + Sbjct: 184 SFYQAFEKIQADVNGIFSEDDLSIIIDILRNFSRERKFEFSDYEFQSLVIHLAIAVERIR 243 Query: 179 RWPLMQGDYLSSLILAIYA-----LRNQLTDEW-PQYPGDEIKQIVEHSGLFLGDNAVRT 232 + ++ I L QL +++ P EI I H L + Sbjct: 244 KGEYIEESLYIGNIENNQMSNTNYLAKQLEEKFSILLPKSEIGYINLH----LVASDQHR 299 Query: 233 LTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAE 292 ++ S +N+ L + + D L++ +T H+ + + Sbjct: 300 DNNELKNTSTNPCETSTNNISNLREIIKNTLYETAYDKDLIDGLTSHVHSSINRLKYGLS 359 Query: 293 HRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP 350 + +N +K + +F+ +L ++ DI + D + I L+F ER + Q Sbjct: 360 IKNPYVNTIKQNFSLSFEQALDLKKVIEFIYDIRINDDECAYIALHFEAFRERMKELPQN 419 Query: 351 ---IILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLD 407 I++ S + + I++ ++ S+ ELV+ + I+ L+I+ + L+ Sbjct: 420 IRVILVCSTGLGSSRLLSARIKKYFPMIKIEKVLSVQELVSSK--IDADLVISTIYLELE 477 Query: 408 DAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFH--------YSNVRGE 459 T+ I+ + + + I+ SF N+ Sbjct: 478 -------TIPTIVVSPILNESDIRTLERNIQNVSSCTSKKYKSFRNLIFEENILLNIEAS 530 Query: 460 SWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFI 519 +++ I L+ + A+ I RE + +A PH ++ Sbjct: 531 NYEDAINHITDNLIKKGFAKEGIAKSAIERENLSYTSFQS-IATPHANPSYIKKSNISVA 589 Query: 520 TLAQPVEVNNEVINHV-LIACAAADARHELKIFSYLASILCQHPAE-IIAGLTGYEAFME 577 TL P+ NE + + I+ +I+ + I T + + Sbjct: 590 TLKNPITWGNEKVEVIFFISLENDKNLELDEIYEVFYDFIDNKKNINDILSATSTKEVYD 649 Query: 578 LL 579 LL Sbjct: 650 LL 651 >UniRef50_C4FVQ8 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FVQ8_9FIRM Length = 649 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 108/631 (17%), Positives = 209/631 (33%), Gaps = 81/631 (12%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ++ RQ +++ +L Q +LA GVS RTI D++ L + I G Sbjct: 9 LMQTRQEQLMVILAQSQGWLKGRDLAALLGVSDRTIRSDMNKLKQ--DYPGAIQTHHHKG 66 Query: 59 YQL-----EIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRA--QLASALNLPETWVAER 111 Y+L E + S L Q + + LLL P+ L+ L + + Sbjct: 67 YRLVAQALEDSNQPSPLGLPQSQEERLHYILKLLLADSQPQTLKDLSQDLYVSPQTLTMD 126 Query: 112 LPRL---------------------------KQRYERTCCLASRPGLGHFIDET----EE 140 L ++ K+R R + G +D+ EE Sbjct: 127 LHQVGQLVGAYPDLDLEHDVKGWQLKGPEFQKRRLYRELLTSELQGDFLNLDKVLAIYEE 186 Query: 141 KRVILLANLLR-----KDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAI 195 ++ +A+ + D L P + L H+ A R Q Y + + Sbjct: 187 FDMVWVAHYFQGLLKQADYQLRPASLPI--LLLHVGIAVQ---RMLAGQFLYHRQDLPPL 241 Query: 196 YALRNQLTDEWPQ---------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQV 246 L ++ Q P E I L A+ L + Q + + Sbjct: 242 VPKEEALARKFLQGVGKQYKCRIPASEAYSIGR---LLEAYQAMHDLASQVIYQGRPLDL 298 Query: 247 ISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAW 305 VQ L Q + + L+ + DA + HL + + E + ++K + Sbjct: 299 --TRLVQDLGQHLQDLVGLDFLSDADFKDRFHLHLQGLIERLHYQVELPNLFLQDMKRQY 356 Query: 306 PAAFDMSLHFITLLREQLDIPLFDSDL--IGLYFACALERHQN--ERQPIILLSDQNAIA 361 P FD+++ T L +L + L ++++ I ++ + R + + + I+L + Sbjct: 357 PLVFDLAVTVSTWLGARLGVVLSEAEIGLIAVHIGSSYSRLERPWKARAILLAPQHYPLM 416 Query: 362 TINQLAIERDVLNCRVIIARS--LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNI 419 + ++ + I+A+ +SE + + ++ ++ T N Sbjct: 417 QSSIDRLKASFGHRLEILAQYDYVSEAQLLHQPVDLVISFMPLAQSFGLPTLQVSTFFN- 475 Query: 420 ITAAGIEQIKHFLATAFIRQQPERFFSAPGSF-----HYSNVRGESWQHITRQICAQLVA 474 + L RQ + G F Y +++ S + + + L Sbjct: 476 --EEDELALVSLLNQVEQRQIAIQLALQLGDFLESRFFYQDLQASSPEQVLTLMAQDLAQ 533 Query: 475 QHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINH 534 ++T D ++ RE LAIPH + LA P+E + Sbjct: 534 AGYVTPDFLPSVLEREALSSTDFDYALAIPHPLQAHSHQSVLAIANLASPIEWGRYPVKL 593 Query: 535 VLIACAAADARHELKIFSYLASILCQHPAEI 565 V++ ++F HP ++ Sbjct: 594 VILLALKDSDWAFTQVFFKWLGQCLAHPRQL 624 >UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Anaerococcus RepID=C7REJ5_ANAPD Length = 625 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 91/628 (14%), Positives = 207/628 (32%), Gaps = 60/628 (9%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSA 57 M+ R +I D L + E+ ++ +S +T+ ++I LN + K I + Sbjct: 1 MIETRTKEIFDYLTSDYGFHSSEEIGEELELSSKTVQKEIGILNSFIKDKGAIVESESGK 60 Query: 58 GYQLEIFERRSFFQLLQ----------KHDN------DDRLLALLLLNTFTPRAQLASAL 101 GYQ I + F L+ + + + + L N+F + +LA Sbjct: 61 GYQFRILDEDKFKNFLKHDWFKYAYFHQENPNKDFRIESIMKLFLFSNSFIKQQELADMF 120 Query: 102 NLPETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + + + + + ++++ L S+P G I E+ + + N + +DP + Sbjct: 121 YVSLSQINKDIKKVRKLLKAYNIELISKPYYGMKIKGREKDIRLAIRNEIGEDPAIFARD 180 Query: 161 GITRDNLQHLSTACD-NQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVE 219 + + D + M +L++ IY ++ + DE+ + V Sbjct: 181 SDEELFTRIQAIIADIDFPESFYMPYANFKNLVVHIYISILRIKEGKYIDLSDELSKRVI 240 Query: 220 HSGLFLGDNAV-----RTLTGLIEKQHQQA--------------QVISADNVQGLLQRVP 260 F N V + L + + +S + + + + Sbjct: 241 SYDEFNIANKVVKELSKKLDLTFPEDEILYLTMHLISKNAVTNYEKVSPEISELAQKMID 300 Query: 261 GIASLNIIDA----QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 I ++ D L + HL + + + +N++K AF ++ Sbjct: 301 EIYKVSKYDFRSNIDLFFALALHLGPLIERLRYGLTMKNPILNDIK-DNQIAFMLATVAT 359 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIIL-LSDQNAIATINQLAIERDV- 372 + E + D + I L+ A A+E + ++ I++ N+ A I + IER Sbjct: 360 NPINETYKTRVCDDEIGYIALHIASAMENNTYLKRTILVVCGSGNSSAQIMKTQIERKYK 419 Query: 373 LNCRVIIARSLSEL-VAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 + LS++ + ++ + ++ D + + V I +I Sbjct: 420 EQIDSLTLTDLSKVDLYNLDKFDFIVSSVPIKQKTDTPI---VYVDVIFKQKDFMKINDI 476 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR-IIARE 490 + F S ++ + + + A+ I + + RE Sbjct: 477 FNVDNFTEINRIF---DNSILRRDIDIKDMDAALDILSDIVSAKTGIDKGNIKEQYLKRE 533 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKI 550 N +A+PH + + + V+ N++ + + Sbjct: 534 EMAFTSYGN-VALPHILDQVKGESFSIVLIPKNKVKWNDDRVKVIYSLIIGNIRGDLSLY 592 Query: 551 FSYLASILCQHPAEIIAGLTGYEAFMEL 578 + L L ++I + + E Sbjct: 593 YDKLGDYLN--SEDLIEKSSEAKNIGEF 618 >UniRef50_B9Y3X0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3X0_9FIRM Length = 648 Score = 148 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 95/646 (14%), Positives = 214/646 (33%), Gaps = 78/646 (12%) Query: 5 RQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 R+++IV L Q T +AQ+ G S R++ + LN + S + GY+++ Sbjct: 6 RKMQIVSFLNHQTGWTTTAMIAQRFGFSVRSVKYSVAELN---KEYGALILSSNKGYKID 62 Query: 63 IFERRSFFQLLQ--------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 + L + + LLL N + L+ L + + L R Sbjct: 63 KLKAAQILSFLPSQTIPASYEERKRYIINTLLLQNQRMSISDLSDKLCISPITLQNELSR 122 Query: 115 LKQRY------------------------ERTCCLASRPGLGHFIDETEEKRVILLANLL 150 ++ L + + + + +L Sbjct: 123 MRTDLMQFHLNIHTKNDMVNITGLAKDKRAVILSLINEEIKSSYFSLERIQEIFTSVSLA 182 Query: 151 RKDPFLIPLAGITR---------DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ 201 R ++ + + + H++ + + P + + +++ + N Sbjct: 183 RIKQLILQVMHKYEYFLDDYSLLNYVLHIALTVELRSSNPARKFNASRQELVSHADMLN- 241 Query: 202 LTDEWPQYPGDEIKQIVEH---SGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLL-- 256 L Q +++ +++ + L D ++ + Q I+ D + +L Sbjct: 242 LASAHVQSIVNDLYVLLKENYDTDFTLYDLYEASVLMMTRAVSSQMSAIAYDQISVILGA 301 Query: 257 ----------QRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 Q V +++ + + HL L + ++K +P Sbjct: 302 DIQRLLDNIVQSVENTYCIDLNNESFLIKFAFHLKNLLLRLENDIQITNLQFESIKTDYP 361 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATIN 364 + +S+H ++ + L + + I L+ +E + + I L N I Sbjct: 362 LIYAISVHISNVIYQFTGHVLPEDEIAYITLHIGVLMEETRAKSDKISCLVLCNDYQQIG 421 Query: 365 QLAIER--DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 Q I++ V + ++I+ L+ + L+++ + L Y + ++ Sbjct: 422 QRLIKKLSAVFSESLLISDVLTHTALPQPLPPADLVLSTAPCALQVQPLVYYQIDQFLSE 481 Query: 423 AGIEQIKHFLAT-------AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 I +I + FIR++ FF F + +CA + A Sbjct: 482 KDIRRIFELIDEIKKRKMKDFIREKILYFFHPDLFFACRQFATHTD--AIEVMCAAMTAG 539 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 ++ D Q+I E + N +AIPH + + +P++ +N V Sbjct: 540 GYVDEDYRQQIDYHEKLSPSAYGN-IAIPHPLDNKAKSSAIAVSVNPRPIQWGANQVNLV 598 Query: 536 LIACAAADARHELK-IFSYLASILC-QHPAEIIAGLTGYEAFMELL 579 + + + IF ++ I+ + + +T +E F LL Sbjct: 599 FMLSLMEKDKEQFSNIFDFIVHIMKDEETFRKMMEVTSFEEFTSLL 644 >UniRef50_B1C796 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C796_9FIRM Length = 658 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 97/648 (14%), Positives = 233/648 (35%), Gaps = 71/648 (10%) Query: 4 ERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKA-RIFASGSAGYQ 60 RQ I+ +L + +A++ G++ RT+ DI +N + G + I +S GY+ Sbjct: 11 LRQKNILKMLLSEDGWIKGSRIAKEMGITDRTVRSDIAAINSAMEGSSNIIESSRQNGYR 70 Query: 61 LEIFERRSFFQLLQKHDN-----DDRL----LALLLLNTFTPRA--QLASALNLPETWVA 109 L+ + +LL N ++RL + L+ ++ P+ +LA L + + Sbjct: 71 LKSSDSELLNKLLFNKKNLPITPEERLRYLSIRLMQVDESNPKKLWELADELAISMPTLE 130 Query: 110 ERLPRLKQRYER---TCCLASRPGLGHFIDETEEKRVILLANLL---------------- 150 + +++ E + + G + EE R LL L+ Sbjct: 131 STIQKIRGVLENRKDPFVIQRKQGF-IWTKGHEESRRFLLKELILDRMDPSYLMISNYYN 189 Query: 151 -RKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAI-YALRNQLTDEWPQ 208 L + G +L+ + ++ L+ + ++ ++L Q ++ + Sbjct: 190 YFDKHILETIMGCIMTSLKEFGSIMTDEDIIHLVVYLAIKHNRISTGHSLIMQKSETYSI 249 Query: 209 Y-PGDEIKQIVEHSGL----FLGDNAV-------RTLTGLIEKQHQQAQVISADNVQGLL 256 P ++ + + ++A +L ++ + + ++ + + + Sbjct: 250 NDPKSKLAFKIADNMKDKLGLHLNDAEILDLIIQLSLMRVVTENKKDKEINNGSDKNHFM 309 Query: 257 QRVPGIAS-------LNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 V + + L++ D +L + H+ + + + LK + Sbjct: 310 AIVDSLLNDIKDNFGLDLSNDEELRVGLCSHIKYMIKQKSELQSSSNPILGLLKTEYSFV 369 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE----RQPIILLSDQNAIAT 362 F+MSL+ + D+ L + + I Y A+ER ++ I L+S+ N + Sbjct: 370 FEMSLYLYECFYDMFDVKLNEDELGYITAYLGAAIERMESNMSHNSICIALVSNTNHGTS 429 Query: 363 INQLAIERDVLNCRVIIARSLSEL--VAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 +A + + + + S I ++ +I S Y+ DD + + ++ Sbjct: 430 TLLMARIKSKFSDKFNLVGPYSAYSLDEIMKDNPSGIITTASKYMFDDCHLPVVKISPML 489 Query: 421 TAAGIEQIKHFLATAFIRQQPERF-----FSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 + I I +A+ + F + N++ + ++ ++ L + Sbjct: 490 DSNDITAINSMVASIKNKTLSNPLPYGLDSYFDKKFFFKNLKADDYEEAITKMTEALERE 549 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 ++ +D + + RE N LA+PH + L P++ N + + Sbjct: 550 GYVKSDFLDKTLEREKISFTTFGNLLAMPHPLESCSNQTIISVGILEHPIKWGNVFVQVI 609 Query: 536 LIACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFMELLHK 581 + + ++ + L +P + YE F+ +L + Sbjct: 610 FLMSIRKEDLKYIRHLFNITVELANNPERVTRLILSKDYEHFISILRE 657 >UniRef50_A5Z3Q0 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3Q0_9FIRM Length = 652 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 94/626 (15%), Positives = 227/626 (36%), Gaps = 72/626 (11%) Query: 1 MLNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGK--------A 49 ML+ER L+IVD L + P T LA GVS R++ I ++ N Sbjct: 1 MLSERGLQIVDKLIENNRTPITSKTLAIYLGVSERSVKTYIKEVSDFCNEHSMILERKPG 60 Query: 50 RIFASGSAGYQL-EIFERRSFFQLLQKHDNDDRLLALLLLN--TFTPRAQLASALNLPET 106 F + Q+ ++ + + +++ + + +LL+ + + LN+ + Sbjct: 61 IGFVADFTDQQIKQVADLKRDKKIVMSKEQRMSYIMYILLSGWDTYTLSLFSEELNVSKK 120 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETE------EKRVI-----------LLAN 148 +++ + + + + + + G G FI E K N Sbjct: 121 VISDDINSIFKEFSKYNIRINRVAGHGVFITGDEFSIRRAMKSYCKYSIGNKVIREASDN 180 Query: 149 LLRKDPFLIPLAGITRDNLQH---LSTACDNQHRWP------LMQGDYL----------- 188 + + + + +DN + + + + M DYL Sbjct: 181 RISVEDQELWINNFGQDNFEKSVEVIHYIEETYGIAYTDYSFKMLADYLCIQLFRVRMGN 240 Query: 189 --SSLILA------IYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNA-VRTLTGLIEK 239 + I+ + +++ +++ + + + L +A V++ T L + Sbjct: 241 VITEDIIPEDENIKYSDIVDKVVEKFCSLSKCNLNEYEKQYIEILLASASVQSNTDLYKA 300 Query: 240 QHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRC-LAAPVWIAEHRQSSM 298 + + +L+ + I ++++ +L++ + + L + E + Sbjct: 301 ISSDKEEKAKKISGEMLEYLSEILNIDLTSNELLKISMENFVPSSLIRTRYGIEATNPFL 360 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSD 356 +++ + F + D + + L+ AL R+ + +IL + Sbjct: 361 GDIREMYSGIFATCFTLTRFYEKYCGAIPTDHEISFLALFVGGALHRNVKTIRAVILGTS 420 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 A +TI IE + +++ S + I + +++ S + +D V + + Sbjct: 421 GIAASTIVARKIESRIEEIKIVAILSSELMDTIDQYDCDIVLSTISSFEYEDKVVH---I 477 Query: 417 KNIITAAGIEQIK----HFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQL 472 II+A + IK ++ +++Q + + N + + + I ++ C +L Sbjct: 478 SPIISAEDEKNIKSKCFEIISHPELQKQGFYSLIDIDNILFVNEKLD-KEKILKEACKKL 536 Query: 473 VAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI 532 ++ D ++ RE I N +AIPH + + + F + LA P+ +++ Sbjct: 537 YNGGYVNKDFFDDVMKREKIEPTAIGNGVAIPHGTPDNVIKPKVFVVRLAHPINWGGKMV 596 Query: 533 NHVLIACAAADARHELKIFSYLASIL 558 + + + D K F + + L Sbjct: 597 DTIFVLAINFDNIGSTKAFFHDFARL 622 >UniRef50_C4V215 N(Pi)-phosphohistidine--sugar phosphotransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V215_9FIRM Length = 630 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 99/597 (16%), Positives = 198/597 (33%), Gaps = 48/597 (8%) Query: 5 RQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFT-LNGKARIFASGSAGYQLE 62 R L+++ L+ + T L+++ G+S RT+ DI LN L A++ A G L+ Sbjct: 3 RWLQLMLLMPEDEFITYKALSEELGISVRTVYDDITRLNEMMLEHGAQLVARTHHGVTLD 62 Query: 63 IFERRSFFQLLQKHDNDDRLLA-------------LLLLNTFTPRAQLASALNLPETWVA 109 + +R F L + D +L L + L AL++ + + Sbjct: 63 VHDRARFLHFLDALGSGDTILGDTSEVRIGKIIRTLFYSSAPCKSDNLCEALHISRSTLK 122 Query: 110 ERLPRLKQRYE-RTCCLASRPGLGHFID--ETEEKR--VILLANLLRKDPFLIPLAGITR 164 + L ++ L +P G I E + +R V + +L D ++ Sbjct: 123 KDLRGVRALLGMYDLSLVHQPYAGLSIRGAEKDIRRCLVRMKRRILAGDGGILHQEVQQT 182 Query: 165 DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ---LTDEWPQYPGDEIKQIVEHS 221 + + D++ + ++I +R + P P + + + Sbjct: 183 GRVLQEIFKQYDCRMAAYSFQDFVLHIDVSIERMRQGHEIRDEALPSLPAAPQDEALSRA 242 Query: 222 GLFLGDNAVRTLTGLIEKQHQQAQVISADN----------------VQGLLQRVPGIASL 265 + + R E ++ ++S V +L V Sbjct: 243 VVVAMETQYRMRFSAGECRYILLLLMSRKVLSWKQASTAAADVYAVVMEMLAAVQRTFCY 302 Query: 266 NII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD 324 + D +L+ +++ HL+ + + ++ P A++M+ +LR Sbjct: 303 DFSHDFELIASLSTHLIPLRTRLLCGMQQENPVGREIREGGPLAYEMANVACGILRSAYG 362 Query: 325 IPLFDSD--LIGLYFACALERHQNERQP--IILLSDQNAIATINQLAIERDVLNCRVIIA 380 + I LYF ALER + +R+ +I+ A + IE + +I Sbjct: 363 CEASADETGYIALYFHVALERMRAQRRKRVLIVCGAGKGAAMLLAHTIEENYGKYLEVIG 422 Query: 381 RSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ 440 + + + I++ V + AG + H + ++ Sbjct: 423 TYEAADFSDTDLQAADYILSTIPLRETLPVPVIELGDVLPWQAGGDLRAHLIHDR--QEA 480 Query: 441 PERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNR 500 +F+ V + + R+ICA A + D +I RE G + N Sbjct: 481 MLAYFAEQLFLP--QVSAATREDALRKICAAAEAVEELPQDFYDAVIERENIGGTALGNL 538 Query: 501 LAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASI 557 +A PH R L QP+ E + + +L F + Sbjct: 539 VATPHPARPMGERSFVVVAVLNQPILWGEEDAQILFLISMKDGGDRDLPQFYKMIGR 595 >UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ5_9ACTN Length = 616 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 92/610 (15%), Positives = 184/610 (30%), Gaps = 95/610 (15%) Query: 55 GSAGYQLEIFERRSFFQLLQKHD------NDDR-------LLALLLLNTFTPRAQLASAL 101 G GY LEI + ++ L+ R L LL+ N + LA A Sbjct: 14 GGGGYFLEIADEGAYRALMHSSPSLVHGVPATRAERVVYLLNDLLMRNDWVFADDLADAC 73 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEE-KRVILLANLLRKDPFLIPL 159 + ++ L +++ R L RP G + E +R+ L A+ + L+ Sbjct: 74 ACSRSTLSLDLRDVERILNRYDLVLERRPRYGMRVSGLELNRRLCLAASAMGDATCLLGG 133 Query: 160 AGIT--------RDNLQHLSTACDNQHRWPLMQGDYLSS-----LILAIYALRNQLTDEW 206 G Q + ++ D L+ ++ L + Sbjct: 134 IGDAAPAPSSAPESLFQRMGMQRESLEVIAASVEDALTDGPININAISYQNLLVHIAIAL 193 Query: 207 P----------------------------------------QYPGDEIKQIVEHSGLFLG 226 + P +E+ I H Sbjct: 194 VRINAGCYVPLASEDMSDIERRSEYAAARRVAGGIKSRLGMELPEEEVAYIAIH------ 247 Query: 227 DNAVRTLTGLIEKQHQQAQVISADNVQGLLQ----RVPGIASLNI-IDAQLVENITGHLL 281 RTL + + + ++ +D + L+ V + D +L N+ HL+ Sbjct: 248 LAGKRTLNDALSNEEPEGGLVISDEIWALVSDMLDSVRTHFHFDFDEDIELRMNLARHLV 307 Query: 282 RCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFAC 339 + + ++ +P A+ M++ +L + + + I + FA Sbjct: 308 PLAVRLRSQMNLKNPLLGDITTHYPLAWSMAVDACEVLHREFGTAPSNDEIGYIAMAFAL 367 Query: 340 ALERHQNE---RQPIILLSDQNAIATINQLAIERDVLN--CRVIIARSLSELVAIREEIE 394 ALER +++ ++ +++ + A + + +++ + + + I+ Sbjct: 368 ALERQRSQAPRKRLLVVCASGAGSARLLKCRCQKEFGSYVESIETCDVMHVADVDFSRID 427 Query: 395 PLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYS 454 + L V V A ++I+ L F F Sbjct: 428 YVFTTVPISAKLPVPVR---EVPFFFDDAAADEIRDLLRFGDKGCIVAGHFDPELFFP-- 482 Query: 455 NVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRF 514 ++R S + +CA + + + RE N +A+PH Sbjct: 483 HMRLTSKDEVLHFLCAAVRDGRSGYEELEPLVFEREAAATTSFGNMVAMPHPLESVSDDT 542 Query: 515 RGFFITLAQPVEVN--NEVINHVLIACAAADARHELKIF-SYLASILC-QHPAEIIAGLT 570 L QPV + + V + C + EL F S LA + + + Sbjct: 543 VVAVALLDQPVVWDEIGTCVRAVFLICFSRIGGPELDAFLSALADVFTDEEAISRLIEHQ 602 Query: 571 GYEAFMELLH 580 + MEL Sbjct: 603 DWSTLMELFQ 612 >UniRef50_A8RD41 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RD41_9FIRM Length = 641 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 112/647 (17%), Positives = 224/647 (34%), Gaps = 80/647 (12%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +NE I+ LE+ T E+A + +S RTI + I LN + + GY Sbjct: 1 MNEIATSILSTLEETDAWITSSEIAHRLNLSTRTIKKYIAELNEEAEN---LIEASRKGY 57 Query: 60 QLEIFERRSFF-QLLQKHD----NDDR----LLALLLLNTFTPRA--QLASALNLPETWV 108 +L F QLL +HD ++R L+ LL + + +L L + E+ Sbjct: 58 KLNKDCLAQFRSQLLTQHDIPQTPEERIHYILIRLLFEKHSSKLSAYELIDELYISESTF 117 Query: 109 AERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF-----------LI 157 ++ C +I TE+ + +L + + ++ L Sbjct: 118 RSDCQKINTICMDFHCTLEVAKDMLWISGTEKNKRKILNSFIFQEYQKHFGDDFFIDELF 177 Query: 158 PLAGIT----------------------RDNLQHLSTAC---DNQHRWPLMQGDYLSSLI 192 P + + ++H++ A N L + D ++ Sbjct: 178 PELDFSFIKNTVKQTFEQFHYFANDFSLNNFVRHVAIAIHRIQNGCNEALTETDEITKDT 237 Query: 193 LAIYALRNQLTDEWPQ-----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI 247 L + QLT + + + EI ++ + N T + Sbjct: 238 LEYQ-MAIQLTKTFEEHFKITFSTTEIYELTL--LIICRGNHFNTNHVNSTEISTFVGAE 294 Query: 248 SADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 D V+G++Q + +++ + + HL L + N++K P Sbjct: 295 LIDFVRGMIQNTKQMFGIDLESEEFISRFCVHLHNLLIRNTNNLLNSNPLKNSIKLQCPF 354 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH---QNERQPIILLSDQNAIAT 362 ++M+++ ++E I L D + I + LE Q++ +++L + + Sbjct: 355 IYEMAVYMANQIQEHYHIHLNDDEITYITFHIGGILEMQKLIQSKLTAVLVLPEYYNLTA 414 Query: 363 INQLAIERDVLNCRVIIA--RSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 IE +I+ ++ E A + LL+ + SH D +++ + Sbjct: 415 SLTSKIEAQFQEELLILEVFATMEEYHASGI-VADLLLTSISHKSYHD--TQLVSITPFL 471 Query: 421 TAAGIEQIKHFLATAFIRQQPE------RFFSAPGSFHYSNVRGESWQHITRQICAQLVA 474 T I +I+ + + ++ E R F + N + I IC++L Sbjct: 472 TQNDIVKIRQSITSIKAQKMEEHRQRNIRKIFKKEFFSHKNSYATGEEAILD-ICSKLQQ 530 Query: 475 QHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINH 534 +H + AQ ++ RE A+PH R + + + + I+ Sbjct: 531 KHCVNESYAQEVMEREALSSTAFG-GFALPHSLHMNCLRTTIYVHIQEKGIIWGKQTIHV 589 Query: 535 VLIACAAADARHELK-IFSYLASILCQHPA-EIIAGLTGYEAFMELL 579 + + + R + IF Y+ I+ I YE F+ L Sbjct: 590 IFLLSVSKQERKMFREIFEYITDIINDAEKFSKIRKAKTYEEFIHLF 636 >UniRef50_C5EFX5 Transcriptional antiterminator of lichenan operon n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFX5_9FIRM Length = 632 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 90/637 (14%), Positives = 207/637 (32%), Gaps = 61/637 (9%) Query: 1 MLNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAG 58 M + +++ LL+Q RT +LA + GVS +T+ + L+ L R+ + G Sbjct: 1 MDRVKLQELLVLLKQDEYRTASQLASRLGVSEKTVRTGLHELDRQLAENGGRVTSKARFG 60 Query: 59 YQLEIFERRSFFQLLQKHDNDDR------------LLALLLLNTFTPRAQLASALNLPET 106 Y LEI ++ F + + D L LL + QL + + +T Sbjct: 61 YHLEITDQDQFEKYQSETAVDGSIPDSGQARSEYLLAYLLFRREYVKIEQLCDFIYVSKT 120 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETE------EKRVILLANLLR------KD 153 ++ L ++ R + RP G I E + + L ++ Sbjct: 121 TLSHYLKSVEDILRRYRLSIERRPNYGIKIRGEEFDMRRLISDYFIKRHCLEGVDISHQE 180 Query: 154 PFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE 213 + LA R + + + Y++ + + P+ E Sbjct: 181 EEMAALARQVRKLMANYEVHLSEISFENFVDYTYVAWKRMKAGYYLKMDRENLPEIGVKE 240 Query: 214 IKQI-------VEHSGLFLGDNAVRTLTGLIEKQHQQAQVI-----------SADNVQGL 255 I + G+ + L + + ++ + + Sbjct: 241 QAFIQELLGILAKEKGISCTQDEENYLLLYLAGKRMIGNIVENDSNFVIHEQTDRLALEM 300 Query: 256 LQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 ++ V ++ + ++ + HL+ + + + +K + A+ MS Sbjct: 301 IRLVDHDFHMDFLKNFEMRMTLNQHLVPFDVRMRYDIPLKNPMLQEIKEKYSLAYQMSGV 360 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP--IILLSDQNAIATINQLAIER 370 ++L+E + + + L F ALE+ ER+ +++ S + + + E+ Sbjct: 361 SCSVLKEYYHREIPEDEVGYFALIFELALEKGDLERRLDILVVCSTGKGTSRLLKYKYEQ 420 Query: 371 DVLNC--RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 + + + + ++ + + + + V + I+++ Sbjct: 421 EFSEFLNSIYVCDLIGLESFDLSLVDYIFTTVPITMKVSVPI---VEVGMFLGTEDIQRV 477 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 L R++ S+V S + + + IC + Q + D ++ Sbjct: 478 TDVLRFGSNGDIIRRYYGPARFL--SHVPVGSKEDVLKYICDVIEKQELVDNDFYDLVLE 535 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE + N + +PH + L +P+ NN + +L+ E Sbjct: 536 RETYIQMDYGNMITLPHPNQIASEESFAYVAVLERPMVWNNLPVQVILLTSIGRKGDKEK 595 Query: 549 KIFSYLASI----LCQHPAEIIAGLTGYEAFMELLHK 581 + + + L + + YE + L K Sbjct: 596 ERQRFYETTARFALSREAVSQLIQAPEYEVLVRQLKK 632 >UniRef50_C0CYQ2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYQ2_9CLOT Length = 639 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 88/632 (13%), Positives = 206/632 (32%), Gaps = 61/632 (9%) Query: 5 RQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFT----LNGKARIFASGSAG 58 + +K++ +L T LA VS R+I I +N + + Sbjct: 6 KMIKLIRILSDYTEFVTASSLAANMDVSTRSIKSYIQEINSVYPEAIESSREGYRIDKQA 65 Query: 59 YQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQR 118 + + E + + + +L+ +T L + + + + L +K + Sbjct: 66 ARRILEESGTHIPQSSQERIVYIINSLIKSDTSVNTYDLCDEMFISYSTIKNDLQAVKSK 125 Query: 119 YERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFL--------------IPLAGITR 164 + + + E+ + LL+++L + + I + I Sbjct: 126 LRKYDLQLNNNHDNLTVSGLEKNKRRLLSSILYDESNVNFVNLETIQNIFPEIEIELIKD 185 Query: 165 DNLQ-------------------HLSTACDNQHRWPLMQGD--YLSSLILAIYALRNQLT 203 L+ H++ A D + D + + Y L + Sbjct: 186 SLLEIFDRFHYFVNDYSLINLVLHITIAIDRIRNRNVNTEDIRDMPPISCHEYELARGIA 245 Query: 204 DEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD---NVQGLLQRVP 260 + Q E Q + L + + A I+ + V+ L+ V Sbjct: 246 RKIEQDFRIEYNQAEVYELALLLISRATAIDYQSITVSNLADFITPECLALVRELISDVN 305 Query: 261 GIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 +++ + + + H+ L R +K + P +D+S+ + ++ Sbjct: 306 SYYYIDLTEPEFLIRFALHIRNLLQRSKNNYFSRNPLTEEIKTSCPLIYDVSVCLSSTIK 365 Query: 321 EQLDIPLFDSD--LIGLYFACALERHQN--ERQPIILLSDQNAIATINQLAIERDVLNCR 376 E+ I + D + I + LE +N E+ L + + Sbjct: 366 ERTGISINDDEIAYIAFHLGSTLEAQKNLSEKVTAALYCPSYYDTNVKLTDTISRHFSSE 425 Query: 377 VIIARSLSELVAIRE--EIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 ++I +E + + + + +L + ++ + + + T ++ ++ L Sbjct: 426 LLITNIFTEERELEKTGKNDLVLSTVPLNSVIQLPL---LQISPFFTEKDVQSLRRQLTE 482 Query: 435 AFIRQQPERF-----FSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 ++ ++F + F + + R + ++V+ ++ D Q I AR Sbjct: 483 IKTNKRRKQFREYLEYLIVPEFFERRDDLTDYDQVVRHMVVKMVSMGYVDEDFEQDIRAR 542 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL- 548 E + AIPH + + + PV+ ++ + VL+ C D R Sbjct: 543 EQLSATAFQD-FAIPHAMKMRAHKTGINVLISDTPVKWGDKQVRIVLMLCFNRDERFIFN 601 Query: 549 KIFSYLASILCQHPAEI-IAGLTGYEAFMELL 579 +IF L +L + Y+ F+ +L Sbjct: 602 EIFEPLTMVLSSRENVKRLVQAGDYQEFIGML 633 >UniRef50_C4FUH4 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUH4_9FIRM Length = 652 Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 98/618 (15%), Positives = 198/618 (32%), Gaps = 77/618 (12%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 +N+RQ+ ++D L +Q ++AQ GVS +TI D+ LN L G Sbjct: 1 MNKRQMHMLDYLLKQTDYVASTQIAQLYGVSAKTIYHDLAKLNEALAPHGLAIDKSPRNG 60 Query: 59 YQLEI--FERRSFFQLLQK------------HDNDDRLLALLLLNTF-TPRAQLASALNL 103 +L++ + L++ D + LL L L++ LA L + Sbjct: 61 VRLDLSQADEARLRSLIKDWQQAAQWEAYGPDDRERHLLKALCLDSGGLDLEDLAEQLYV 120 Query: 104 PETWVAERLPRLKQRY-------------------ERTCCLASRPGLGHFIDETEEKRVI 144 + L RL R+ E R L ++ + E Sbjct: 121 SSVTLNRDLSRLGPRFQACGLTLVRQDGRLQVQGRESAIRQCLRTYLQEWLYQMGEPIQD 180 Query: 145 LLANLLRKDPFLIPLA-GITRDNLQHLSTA------------CDNQHRWPLMQGDYLSSL 191 L+ +D L A QH TA + + + L Sbjct: 181 LVVFFHAEDITLCQHALNQLSQTYQHDFTADYYLLLLLECLIIRRRGQLGQVLQVRAKEL 240 Query: 192 I-----LAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQV 246 + L +Y +L + ++ I S + + ++ + Q Sbjct: 241 VRDLSHLEVYFFAGELLEAVTGQALVQLSAIEIESLAYTLLAVGFKIQSPDYERELRQQ- 299 Query: 247 ISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAW 305 VQ L+QRV ++++ D L+ + H+ + +++ ++ + Sbjct: 300 -----VQALIQRVSDFLNVDLSQDQHLLAMLANHMSSMIFRLRHHMHVTNPALDEIRKQY 354 Query: 306 PAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATI 363 F++ + E D+ + D + + ++F ALE+ Q +++ A + + Sbjct: 355 LTLFNIVWLVLRDFAEHYDMEVPDEELAFLVIHFQIALEKVQRPLTIVVVCQHGLAASEL 414 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 ++R ++ EL A + L+I++ + V + Sbjct: 415 ILAKLQRIFSPSDRLLNLKWQEL-ADMDWRGVDLVISSLDLKEELPVPVQRVSPIMTQDE 473 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSFHYS------------NVRGESWQHITRQICAQ 471 + H+ Q + SFH + + + + AQ Sbjct: 474 LEQIRHHYDQLTSGHHQMVKALRRESSFHVASLAELIKTPDQVQLTANNQDQALELVLAQ 533 Query: 472 LVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV 531 Q+ Q + RE G + +A+PH + ++LA+PV Sbjct: 534 ASPQNLANPAFVQSVYEREQMGATSVYTGVALPHSDPKTVTHSEIVLVSLAKPVSWGQNQ 593 Query: 532 INHVLIACAAADARHELK 549 + + + A K Sbjct: 594 VKLIFLIAVAERDMKLFK 611 >UniRef50_A8RW19 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW19_9CLOT Length = 675 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 108/660 (16%), Positives = 213/660 (32%), Gaps = 82/660 (12%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M+ ERQ KI+ LL + T LA S +TI D+ L L + Sbjct: 9 MMQERQYKILKLLYRSDGFVTVERLAADVNCSLKTIRNDLKQLGSFLEEYGLGKVVSKSN 68 Query: 59 YQLEIFERRSFFQLLQKHDNDDR-----------LLALLLLNTFTPRAQLASALNLPETW 107 + + + + + Q ++ ++ +L LLL + +L L + Sbjct: 69 KGVCLIKDKDWDTAKQAWNDVNQMELYGTDKHFQILELLLKQRSIQKMKLEQRLLISRLD 128 Query: 108 VAERLPRLKQ-RYERTCCLASRPGLGHFIDETE----EKRVILLANLLRKDPFLIP--LA 160 + + + + G G I+ +E L A++ RK L Sbjct: 129 AEKAASQASVWLTAHHVAVTCKRGQGLQIECSEYYWRMAMWELFADISRKRQEFGDQTLK 188 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT--------DEWPQYPGD 212 T L A L + + L L+ E+ + P D Sbjct: 189 SQTEKFLWGFDMAGVTGAIAGLEKKFGIHYSFDGYQQLSFLLSLCVIRIRKKEYAEIPAD 248 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEK----------QHQQAQVISADNVQGLLQRVPGI 262 Q E GL + T +++ + V+ A +Q Sbjct: 249 FGHQRAEWQGLEYDLSMAETCMESLKEYYHTDFPEGEKQFTVLVLGAAEIQEFTDEASRQ 308 Query: 263 ASLNI------------------------IDAQLVENITGHLLRCLAAPVWIAEHRQSSM 298 + D L +++ ++ Sbjct: 309 TYMEANQNICRVTDKVISITGNILGQGLDRDDYLFDSLLLYMKSKTLKLRCGILEENPLK 368 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSD 356 +K+ +P + + ++ +L++ + + + + LY A+ER + IL + Sbjct: 369 EVVKSKYPNIYAAAWSASLIIESELEVRIGEDEVAYLALYIGGAIERLNVGVEVCILCNH 428 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 I+ I + IER + N V+ + + I+ LI + A + + + Sbjct: 429 GIGISRILKEQIERSIQNINVVDVLTTRDTCKIQRSQCDFLISSV-PVGDVFAGRDVVQI 487 Query: 417 KNIITAAGIEQI---------KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQ 467 N++ I+QI K A + E P ++ + I Sbjct: 488 GNVLQPWDIQQIQNKMKQVRKKKMRRIAEKTELSEYQLFHPSLVYHFP-ERTHKKEIISF 546 Query: 468 ICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV 527 +CA+L ++T D Q ++ RE ++ +AIPH + R L +PV+ Sbjct: 547 LCARLAEAGYVTKDYEQTVLDREETTSTVLELGVAIPHGAAFCVCRPVIAAAILEEPVDW 606 Query: 528 N-NEVINHVLIACAAADARHE-----LKIFSYLASILCQHPA-EIIAGLTGYEAFMELLH 580 + ++ + + D R + ++ +S + ++L A E L G E L+ Sbjct: 607 GRDRRVDRIFLLALNLDERFKAKGQIIRFYSAIVTLLDDKEAYEEFHSLRGQEEIAGYLN 666 >UniRef50_Q5WKW9 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKW9_BACSK Length = 608 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 111/632 (17%), Positives = 232/632 (36%), Gaps = 88/632 (13%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 + +R +++ LL+++ + EL +Q GVS RTI DI LN A I ++ G Sbjct: 1 MKKRHARLLQLLKEKEGRFLSGRELGEQLGVSDRTIRNDIRILNEDYLINAEIVSNNRLG 60 Query: 59 YQLEIFERRSFFQL-------LQKHDNDDRLLALLL-LNTFTPRAQLASALNLPETWVAE 110 Y+L R + Q L H +L+ LL N + + A + + Sbjct: 61 YKL----RGTLTQFNKRSPLDLDYHKRAFQLVKELLDANGWMSYDKFAETHFVSPQTIHS 116 Query: 111 RLPRLK---QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 + R+ ++Y+R ++P G + E+ + +LL +L + F I++ Sbjct: 117 DVMRMSEWLKQYDRKAMFETKPFCGIRLLGNEQDKRMLLTSLFNNE-FAAKQEAISQMTT 175 Query: 168 --------QHLSTACDNQHRWPLMQGDYLSSLILAI------------------------ 195 Q ++ Y+S+ + A Sbjct: 176 AFSGWHTPQSIADIGKKLSDVLDANSIYVSASVWAKLLAVVLVAVHRGKTHELSTNKSAQ 235 Query: 196 ----YALRNQLTDE--WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA 249 + L Q+ + WP P E+ + + F + ++ Q A + Sbjct: 236 AGANWKLAEQIANAIGWPCCPDGELAYLASNCIAFKLLPIQKNGNTAASERLQAACLAG- 294 Query: 250 DNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 L + +++I D +L+ ++T HL L+ E S++ +KA + A Sbjct: 295 ------LSLLEKQYGVDLIGDQKLLRHLTLHLQNMLSVLQDQYEIEAPSLSMIKAQYIHA 348 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSD-QNAIATINQ 365 F M++ F L E+L I + +++ + L+ A++R + + + L+S A+ T+ + Sbjct: 349 FQMAVVFAEELGEKLSISVPEAEVSYLALHLQAAIDRMERKPIRVPLISTKSLAMTTLMK 408 Query: 366 LAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI 425 +E+ + A+ + +L + + + IT I Sbjct: 409 QKVEQAYPQVSIQEIYIPYAPSAVPRDAAFVLTTSKELKTQHKTLYIE---GDFITKEDI 465 Query: 426 EQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR 485 +IK L ++ + F + G++ + + R + + A+ ++ + Sbjct: 466 ARIKECLTYGILQ----ARVTEDCFFR---LNGQTKEELLRLLVKKAGAEVYLPS----- 513 Query: 486 IIAREGEGENLIVNRLAIPH-CWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA 544 I +RE I NR+A+PH S + F ++ V+ + V + + Sbjct: 514 IESREQLSATDIGNRMAVPHPLISIDAPETKIFVGMNSRAVQWGERTVQMVFLLLVSERD 573 Query: 545 RHELK-IFSYLASILCQHPAEIIAGLTGYEAF 575 + IF + + + + Y+ F Sbjct: 574 TVLYESIFREIYQLSK---TARLQDMKSYQGF 602 >UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2S2_9FIRM Length = 632 Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 102/634 (16%), Positives = 225/634 (35%), Gaps = 66/634 (10%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSA 57 M + +L ++ L +P + LA VS +T+L+ I+ L L A I + Sbjct: 1 MYEKDRLVLLQKLMASSEPLSSSALAFMLNVSVKTLLKYINQLKDELMENGADILIKRGS 60 Query: 58 GYQLEIFERRSFFQLLQK---------HDNDDR----LLALLLLNTFTPRAQLASALNLP 104 G L +++ F +Q ++R L L+ N + LA + + Sbjct: 61 GSVLIVYDPDKFNHYVQSLSVGEGDGVGSPENRKKYLLARLITENEYLNLYDLADEIYIS 120 Query: 105 ETWVAERLPRLKQRYER---TCCLASRPGLGHFIDETEEKRV------------ILLANL 149 + + + L LK ER T + G E + +R L Sbjct: 121 PSSLRKDLKELKPTLERYHLTLQHSHSSGYRITGKEKDIRRCLSKEASISGIIDFLPQET 180 Query: 150 LRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ-LTDEWPQ 208 + K L + + ++L + + + L ++ + L NQ +++ Q Sbjct: 181 MYKSSQLSLIQHVIAESLMNANISITADSCSALSLHILIAINRVETNNLINQEVSEAMRQ 240 Query: 209 Y-----------PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN----VQ 253 +EI + I H+ + Sbjct: 241 SLEYKTAIDINRSIEEIFHVSLPEAELCYFAFHINGKKKINADHESLSEDLPQDAVIFYN 300 Query: 254 GLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 L+ + ++ +++ D L N+ H++ L + QS++++++ +P A +++ Sbjct: 301 LFLRNILKLSKIDLFEDKDLRANLLTHIVPFLHRLDNNMQVTQSNLSSIRDEFPFANELA 360 Query: 313 LHFITLLREQLDIPLFDSDLI--GLYFACALERHQNERQPIILLSDQNAIATINQLAIER 370 + ++ + + I + + +++ L+ A ALER R + + N I+++ +L R Sbjct: 361 VCGLSFIPRKYGIAVSEEEIMYFTLHIALALERGPEARVKVNIAVISNDISSLFKLIAYR 420 Query: 371 ------DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 D +N + + ++ + + +L + D + ++ ++ Sbjct: 421 LNKTLADFINLIKLFDAKSLDAEELK-KFDVILNATEVNLRFDKPT---LKIQPSLSEND 476 Query: 425 IEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ 484 + ++ L + ++ Y + S Q + + + AD Sbjct: 477 LHILRLMLNNLNEKFHLDKLIRPEL---YLEISASSRQEALMKQIEHIQKSLPLPADFYD 533 Query: 485 RIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA 544 + ARE G N++AIPH + ++ L +PV N + + + + C + Sbjct: 534 SVAARERMGTTEYNNKIAIPHPLNPEQLPNFISICKLKKPVTWNAKPVQIIFLVCINENQ 593 Query: 545 RHELKIFSYLASILCQ--HPAEIIAGLTGYEAFM 576 +IF S + Q H A + Y+ FM Sbjct: 594 ALT-RIFFDKISKIIQNSHLAFELLETRNYDEFM 626 >UniRef50_C0QXV4 Transcriptional antiterminator , BglB n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QXV4_BRAHW Length = 620 Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 86/613 (14%), Positives = 210/613 (34%), Gaps = 67/613 (10%) Query: 18 RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-GYQLEIFERRSFFQ--LLQ 74 T L++Q VS +TI + +N+ L S GY+L +F L Sbjct: 19 ITAEALSKQLNVSEKTIRTKVREINYELQKLNIKIESKPRYGYKLICDNYDNFKSMDFLS 78 Query: 75 KHDNDDRLLALLLL-------NTFTPRAQLASALNLPETWVAERLPRLKQRYE-RTCCLA 126 +ND ++ + + + +L++ +T + L ++ + L Sbjct: 79 NINNDMDYRIRIIFKYLIEINSEYIKADDICDSLDISKTTLTNILKIMEYNLKYHNLKLE 138 Query: 127 SRPGLGHFIDETE----------------------EKRVILLANLLRKDP---------F 155 RP G + E EK + ++ N L K Sbjct: 139 RRPNYGIRLIGNEFDIRNFIICNYLNDFLYENNMNEKLIGIIINFLNKYEIKFSEINLEN 198 Query: 156 LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIK 215 I ++ +++ + C + + + I ++N++ ++ EI Sbjct: 199 FIQYINVSISRIKNNNFICSYEKDIIKDISEEIRLSEELIKQIQNEID---IEFNDTEII 255 Query: 216 QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVEN 275 I H A + L + E + Q +D + +L V +++ + + Sbjct: 256 FIAIHI-------ASKNLFSINENYNSVIQDKFSDIIDKMLDMVYKNLKIDLRNNFNLIL 308 Query: 276 ITG-HLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--L 332 + H++ + + +N++K + +F ++ + +L++ + + + + Sbjct: 309 LLNQHMIPLDIRIKYNIFQKNPMLNDIKNNYSLSFLLASESVAILKDYYNKDISEDEIGY 368 Query: 333 IGLYFACALERHQNERQPIILLSDQNAIATINQLAIE--RDVLN---CRVIIARSLSELV 387 + L F LE + +L + T + L + R N + + Sbjct: 369 LALLFQIGLEETVESINKMNILIVCGSGKTTSNLLVTKYRKEFNNYIENIYAEDLMGLKD 428 Query: 388 AIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSA 447 +++ + + L + + + N + + I +K+ + E + Sbjct: 429 FDFSKVDYVFSTVPINVKLPIPI---VYISNFLKSDDIINVKNTFESLNRNIILEYY--- 482 Query: 448 PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCW 507 + ++G++ + I + IC+++ +I + + ++ RE E I N +AIPH Sbjct: 483 KEEMFTTYIKGDTKEEIIKNICSEIKKYKNIPDNFYELVMKREQLAETDIGNLVAIPHPI 542 Query: 508 SEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASI-LCQHPAEII 566 + + L +P+ + V + + + Y + L + + + Sbjct: 543 EVVTKDTFVYVAVLDKPILWQKNNVQVVFLISVSNKNDDLKNFYQYTTNFLLNESSVKKL 602 Query: 567 AGLTGYEAFMELL 579 +E + LL Sbjct: 603 IENKTFENLIFLL 615 >UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_9MOLU Length = 628 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 102/631 (16%), Positives = 235/631 (37%), Gaps = 57/631 (9%) Query: 1 MLNERQLKIVDLLEQQPRT---PGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GS 56 MLNERQ +I L++ + ELA + S +T+ + + L S S Sbjct: 2 MLNERQKQIFLCLDENKNSFIKGIELANKVNCSLKTLQNTVKEMKIILEKYQLEIISMTS 61 Query: 57 AGYQLEIFE---RRSFFQLLQKHDNDDR-----------LLALLLLNTFTPRAQLASALN 102 GY L I + F QLL + D+ L LL N F LAS + Sbjct: 62 KGYNLIIHDQQEYNDFKQLLLESDDKKDFNNQGYRITYILSTLLSDNHFVKADDLASQMY 121 Query: 103 LPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAG 161 + + V+ L +K+ E+ + +P G + E+ + + K+ L G Sbjct: 122 VSRSSVSSDLKIVKRVLEKYQLKIEHKPNYGMIVVGLEKDKRD----CIIKE-QLELQLG 176 Query: 162 ITRDNLQHLSTACDNQHRWPLMQGDYLSSLIL---------AIYALRNQLTDEWPQ---- 208 + + L+T D + +S ++L +I +++ + + PQ Sbjct: 177 HSTIKKEWLATISDIVVDSLMKAKYRISDVVLQNLVLHICVSIQRMQHGIYIDNPQMARQ 236 Query: 209 ------YPGDEIKQIVEHSGLFLGDNAVRTLT-GLIEKQHQQAQVISADN----VQGLLQ 257 + ++ + +N + L L+ K+ + + + V G+L+ Sbjct: 237 YGHEHVIAKKILDELASIYHFIITENEISFLAIHLLGKRSYEENDLISKEIDYFVNGMLE 296 Query: 258 RVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 + ++ D +L ++ HL+ L + + + + +++A +P A+D+++ Sbjct: 297 EIKIKTDIDFYGDVELKISLALHLVPLLVRLESQMQLQNTMIQDIQANYPLAYDVAVIAA 356 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQNE--RQPIILLSDQNAIATINQLAIERDV 372 + + EQ L + + ++F+ +L + +N+ + ++++ + + Sbjct: 357 SYISEQKHYQLSSDEVGYLAVHFSLSLSKKENKINPKKVLIICNARRGDYLMIQHTFLKE 416 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 N + ++ L + ++ I + + + I I++IK+ L Sbjct: 417 FNEMISDLEIINALEIPQYNLDDYDCIFATFLNHPLIPKRALRINFFIDQKDIQRIKNSL 476 Query: 433 ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGE 492 + ++F + + ++ + + + +C + D Q I RE Sbjct: 477 QGQSEAGELLKYFKEE--YFMGMIDAKNQKEVIQLMCEVANKYNEFEEDLFQSCIRREEL 534 Query: 493 GENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFS 552 G +A+PH ++ L +P+ + + + + C + +L++ Sbjct: 535 GSTAYGQLIALPHPDHLISQKTIVITAILDKPIVWSKQKAQLIFLICVEKGNQKDLRVLF 594 Query: 553 YLAS--ILCQHPAEIIAGLTGYEAFMELLHK 581 S ++ Q + + Y+ F + L K Sbjct: 595 ECISKFMMDQQSVQDVICRGDYQTFTKNLGK 625 >UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing protein n=3 Tax=Enterococcus faecalis RepID=C7UBV6_ENTFA Length = 652 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 104/647 (16%), Positives = 227/647 (35%), Gaps = 73/647 (11%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG- 58 +++RQ K++ LL +Q ++ +S RT+ +DID LN L + Sbjct: 4 ISKRQHKLLRLLLEQKDFLPVNHFSKILSISDRTLYKDIDELNKALKKRKIEILKRQGKG 63 Query: 59 -----------YQLEIFERRSFFQLLQKHDNDDRLLA---LLLLNTFTPRAQLASALNLP 104 L+IF S + + ++ LLL N L+ + Sbjct: 64 IFLSKSDLSNDEILKIFGEASTQIDFNQLPLERQIKMAEYLLLRNKKVSYQLLSDEFLVS 123 Query: 105 ETWVAERLPRLKQRYERTCCLASRPGLGHFIDETE--------------EKRVILLANLL 150 T ++ L +++ E + G ++ E + L + Sbjct: 124 RTSISNDLDQIQTVIEGSSVTIRSDNNGTKVNGNESEIQKAIKQYAYFIIDKSDLTNSYR 183 Query: 151 RKDPFLIPLAGITRDNLQHLS--TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW-- 206 + P L+ + + +D ++ +S ++ + D+ SL+L+I +L + + Sbjct: 184 VQFPSLL-FSFLPKDIIKKVSGLLQTNDHFNIDKLSDDHFQSLVLSISIFVLRLQEGFHI 242 Query: 207 ---------------PQYPGDEIKQIVEHSGLFLGDN-----AVRTLTGLIEK---QHQQ 243 + +E+ + +E D+ R L + + Sbjct: 243 EYQDNFLFENVESLKTFFLANELVENLELDNSIKLDSNDFEYFNRQLVAHGFEPRLRDLA 302 Query: 244 AQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 Q V+ ++Q++ +++ D +L NI HL+ + + +K Sbjct: 303 IQKEYDAVVRKMIQKMSDSIQVDLTRDEKLYMNILYHLVSMIYRSKLNVPVSNPLLEEIK 362 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAI 360 + + + + + ++LDI L D + + ++F A++R R+ +I+ Sbjct: 363 REYSVLYSTTWLILAGIEKELDIRLTDDEVAFMMIHFQGAIDRLSANRKILIVCPTGIGT 422 Query: 361 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 + + ++R ++ SL L L+I + +D V V ++ Sbjct: 423 SELIANRLKRVFSPQDIVEVVSLRTLYKRDLNKIDLVISSVQLEKIDVPVTY---VSPLM 479 Query: 421 TAAGIEQIKHFLATAFIRQQPERF------FSAPGSFHYSNVRGESWQHITRQICAQLVA 474 + ++++ F ++ + N + + ++I +L+ Sbjct: 480 SKQDLKKVSATYLDLFYEEEVNDQPFEHLGKIIDSDLIFLNETVATKEQCIKRITQKLLQ 539 Query: 475 QHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINH 534 +T Q I RE G + AIPH + + +TL +P+ N +IN Sbjct: 540 NDFVTDSFEQAIWDREKLGVTDLPIGAAIPHPSPSTVKESKLVIMTLVKPIRWNFRMINT 599 Query: 535 VLIACAAADARHELK-IFSYLASILCQHPAEI-IAGLTGYEAFMELL 579 VL+ C A +K I S + I+ E +++L Sbjct: 600 VLMICVAEKDLKHIKGILSEIYRIVETKKNIDRFIFSKDEEEIVKVL 646 >UniRef50_C5EW03 Phosphoenolpyruvate-dependent sugar phosphotransferase system n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW03_9FIRM Length = 670 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 105/666 (15%), Positives = 208/666 (31%), Gaps = 95/666 (14%) Query: 3 NERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG--SAG 58 ++RQ I+ +L T +LA+ S TI D+D + L G Sbjct: 4 SKRQKLIIKILADSDTALTCRKLAKLLDTSENTIRNDLDDIEGKLRESGAGAVERKPGVG 63 Query: 59 YQLEIFERRSFFQLLQKHDNDDR-----LLALLLLNT--FTPRAQLASALNLPETWVAER 111 +L + + Q+ D L +L +L+ L + + ++ Sbjct: 64 IRLVLVNQAFLQMDTQELGGQDDRKYYMLRRILCTGPGHVLTETRLSEELFVSRSSISRE 123 Query: 112 LPRLKQRYER-TCCLASRPGLGHFIDETEE-KRVILLANLLRKDP--------------- 154 L + Q + R G + E KR + K+ Sbjct: 124 LDAIGQWLGNYNLQIEKRRNHGISLKGKEFDKRRAIAELFFTKEADAGSDYARQVPDLSG 183 Query: 155 ---FLIPLAGITRD--NLQHLSTACDNQHRWPLMQGDYLS---SLILAIYALRNQLTDEW 206 ++ D +++ A + +H DY++ + L++Y +N T ++ Sbjct: 184 YQKEMLGTIIPDTDTASIKSFIRALEKRHDSIQTHRDYVTLFLHIALSLYRSKNGCTVDF 243 Query: 207 --------------------------------PQYPGDEIKQIVEHSGLFLGDNAVRTLT 234 + D I V SG+F + Sbjct: 244 SETDDFILKAASADVYREEIDRCFQDKMGYAPKESERDYIFLYVIFSGIFRNAGMDYMRS 303 Query: 235 GLIEKQHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEH 293 ++E V L+ V + +NI D L EN+ HL + Sbjct: 304 SILESARF------GSFVHEFLEMVSSVLGINIPQDGHLYENLKYHLSDMICRMKIGMTI 357 Query: 294 RQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ-P 350 R ++ +K +P+ F S F L + + + D++ I Y A E+ Sbjct: 358 RNPLLHEIKDKYPSVFGASWAFSILFEKYFGLMVNDNEIAFIATYLLTAREQLNYYTVTA 417 Query: 351 IILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAV 410 I+ + ++A + ++ N V + + + + + + S + Sbjct: 418 CIVCNYGVSVAQLICEKLKYRFPNIHVTDVLAYEKFRQLCQGGDGNWDMVISTIGPLEER 477 Query: 411 NNYITVKNIITAAGIEQIKHFLAT---------AFIRQQPERFFSAPGSFHYSNVRGESW 461 + V I+T + I+ + T + + +R PG + Sbjct: 478 QTVVCVSPILTEEDEKSIEKLVKTVSRKLHQRKEAVDSRTKRRLCVPGLVAFG-YSAADK 536 Query: 462 QHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITL 521 R L ++T +I RE + AIPH + R + L Sbjct: 537 MEAIRLGSDMLKKLGYVTDGFVDSVIKREMAVSTEVGFGFAIPHGSPKFVRHSGIAVVRL 596 Query: 522 AQPVEV-NNEVINHVLIACAAADAR----HELKIFSYLASIL--CQHPAEIIAGLTGYEA 574 + V + E ++ + + A D R ELK F + ++L + P + L + Sbjct: 597 DKTVLWHSGEAVDTIFLIAACTDKRPQDMDELKGFYKILAVLLDEEGPRKRFKSLNKAQD 656 Query: 575 FMELLH 580 ++ Sbjct: 657 ICNYIN 662 >UniRef50_C9A090 Predicted protein n=2 Tax=Enterococcus RepID=C9A090_ENTGA Length = 630 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 93/619 (15%), Positives = 222/619 (35%), Gaps = 52/619 (8%) Query: 9 IVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLN-GKARIFASGSAGYQLEIFE 65 ++ L +Q T E+A + GVS +T+ R ++ +N + + I +G L+I Sbjct: 13 LIRALSEQDGFMTTKEIAAKVGVSTKTVRRYVEKINQSQSLYGCVIQGKKGSGLFLQIIN 72 Query: 66 RRSFFQLLQKHDNDDRLLALL----LLNTFTPRAQLASALNLPETWVAERLPRLKQRYER 121 F + L+ +D + ++ + + L L + ++ +++ L +L++ Sbjct: 73 HELFQRSLENTPQEDFVTQIIEYFVQEDEYIKSELLCERLFISQSKLSQELKKLRRILSH 132 Query: 122 -TCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGITRDNLQH--------LS 171 + ++P G + +E R + +N L+K + + + Sbjct: 133 YNLSIQTKPYYGMKLCSSEFDLRRFMASNYLQKTHLKQLHQLPSSEGTPSQLHRQIQAII 192 Query: 172 TACDNQHRWPLMQGDYLSSLI--LAIYALRNQ--------------LTDEWPQYPGDEIK 215 A +Q +P+ +++L+ LAI +R Q E +K Sbjct: 193 LAEFSQKAYPI-SEAIVTNLVNHLAIAVMRMQSGRYLDRNLPIGGRTNAEQSLLGKRIVK 251 Query: 216 QIVEHSGLFLGDNAVRTLTGLI-------EKQHQQAQVISADNVQGLLQRVPGIASLNII 268 +I E G+ + + G I + + +D V+ +L+++ ++ Sbjct: 252 RIEEECGVLFTECERNYVLGQIVGKRVIPKNEKNVVSEEVSDLVRQVLKKIKNRRQIDFS 311 Query: 269 -DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPL 327 D L + H + + E + ++++K +D+++ ++ + + Sbjct: 312 QDLDLQTMLMLHFVPLIDRIELGIELKNPLLDDVKVHCNVGYDLAIIAGQVIVAHFNKRI 371 Query: 328 FDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIAR---- 381 D + + ++F AL + ++ Q +L + N E+ R I Sbjct: 372 SDHELSYLAMHFDVALNKKSSQTQRKYILVVNDLGRAANAFLKEKFEFYFRNYIKEVTVC 431 Query: 382 SLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQP 441 + E +E + I ++ + ++ + I++I L+T F ++ Sbjct: 432 NQYEFAQFLKEQDFDFIFSSIDLPYE-GTIPVMSFDYFMRPEMIKKIADALSTVFTVEKL 490 Query: 442 ERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRL 501 FF P + E+ + + +C + Q+ + + + RE + + Sbjct: 491 LTFFKEP--LFICDQDFETKEEVLHFLCHCINEQYQMPNNFEALVFEREAFFGTDFLPMV 548 Query: 502 AIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQH 561 A PH L +P+ + + V + A + K + +C Sbjct: 549 AFPHPNVLIGSETVIAVAHLKKPIFWYKQSVRLVFLLVIAEQDHLKAKSLNDHLIKICT- 607 Query: 562 PAEIIAGLTGYEAFMELLH 580 +E + L F+ +H Sbjct: 608 SSEKVNELIATNDFITFIH 626 >UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1J6_ERYRH Length = 641 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 92/623 (14%), Positives = 199/623 (31%), Gaps = 68/623 (10%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 L +RQ I+ L+ T ++A + +S +T+ R++ ++ L + S G Sbjct: 3 LTQRQNSILLLIINAHDAITSDDIATELNISSKTVQREVQAIDSILKKRNMAITSLRGKG 62 Query: 59 YQLEIFERRSFFQLLQKHDNDDRLLALLLLN--------------------TFTPRAQLA 98 Y + + ++ + + +D +L N T+ LA Sbjct: 63 Y---LIDDSHKNEMWKTYFYNDEFDNNVLPNVRQSRVEWIIRKIANGTLNGTYFTLEALA 119 Query: 99 SALNLPETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLI 157 L + + + L +++ E L + G + E L+ + L + I Sbjct: 120 DNLFISLSTLKRDLVSVRRILREYHIFLENDYKRGLVLTGDENSIRRLINDYLVLEKSTI 179 Query: 158 PLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSL------------ILAIYALRNQLTDE 205 + I N + +L+ + + I + L++ Sbjct: 180 DINRIIGQNTPRMDIIERIIVTCIQKYQLHLTDIGFKNLSIHIEIALTRIEQGKLGLSNT 239 Query: 206 WPQYPGDEIKQIVEHSGLFLGDNAVR---------TLTGLIEKQHQQ------AQVISAD 250 D + + + + A+ + + Q + S Sbjct: 240 TTSINTDSNAYLCAEALAVMLEEALTLKIPESEIINIYIHLSSQKKLHTDVDNINSESPH 299 Query: 251 NVQGLLQRVPGIASLNIIDAQLVE----NITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 N+Q L + + I + D + E + HL L R ++ ++ +P Sbjct: 300 NLQILNEALDDIYRIYGSDFRHDEILKQGLMTHLESALKRIELGLSIRNELLDEIEKNYP 359 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER-----QPIILLSDQNA 359 ++ + I + + L+F A ER + + + I++ + Sbjct: 360 FEIQIAKVLAFHFLKTNAIAFNLDEVGFLALHFCGARERARQDEKSETTRAIVVCTTGVG 419 Query: 360 IATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNI 419 A + + +E + I S + + + L+I+ H + V + V I Sbjct: 420 TAMLLKAKLESQFGDALEIKKVSALYQLDKHDMDDVDLLISTVHIDRNLGVPTVV-VSAI 478 Query: 420 ITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHIT 479 +T I IK ++ F + +S Q + + + + +I Sbjct: 479 VTDRDIAHIKRYIKGNPSNSHSVADLFDEKLFIVNP-DTQSPQELLEMMSQKALTLGYID 537 Query: 480 ADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIAC 539 + II RE G + N + IPH R L +P+ + + +L+ Sbjct: 538 KACQESIIEREALGSTEVGNLVCIPHNIEGSVYRPSIVVCVLDKPIPWKYDHVQLILMIL 597 Query: 540 AAAD-ARHELKIFSYLASILCQH 561 D H +F+ L S + Sbjct: 598 IDQDHRTHYSDLFAELYSEIDHQ 620 >UniRef50_C8NIY4 Putative uncharacterized protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NIY4_9LACT Length = 635 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 106/628 (16%), Positives = 218/628 (34%), Gaps = 78/628 (12%) Query: 14 EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLL 73 Q+ ELA GVS RT+ DI+++N I A+ GY L F++ + L Sbjct: 19 RQEWMKGRELATCLGVSTRTVRLDIEHINQEAPH--IIQANRQKGYHLVAFQQNRYITAL 76 Query: 74 ----QKHDNDDR----LLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCL 125 DN++R L LL + R++Q+ + L Sbjct: 77 NPTKTPQDNEERSVHLLKQLLFKEDGVFIDHFCEQCFVSAKTFELVRIRVQQKLQEYEGL 136 Query: 126 ASRPGLG-HFIDETEEKRVILLANLLRKD--------PFLIP---------LAGITRDNL 167 + + G ++ +E + L NLL+K+ L+ + I D L Sbjct: 137 SLQLNNGFLQLEGSETSKRKLYRNLLKKEVGEDFLNSSELMQVYPELDMEHIQSIIWDKL 196 Query: 168 QHLSTACDNQ-------------------HRWPLMQGDYLSSLILAIYALRNQLTD--EW 206 +H + H D L L + +R+ + E Sbjct: 197 KHNRYSIRKSLMPFLLLHMGIVLQRIKVGHTVQEFSQDEL-DLEVEYQIVRSIFSKILEE 255 Query: 207 PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLN 266 P E+ + + +AV + + +V+ + L + G++ + Sbjct: 256 TIIPEAEVVSFAKLLKAYHNSDAVESKISFRGEIVDLEEVV--RQIGEQLYSIMGVSFIE 313 Query: 267 IIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIP 326 D + HL L + K +P FD ++ L Sbjct: 314 QEDFTM--RFQLHLQGFLERVQLNLSLPNVYVQTFKRQYPLVFDTAVSISQYLMSVFQCE 371 Query: 327 LFDSD--LIGLYFACA-LERHQNERQPIILLSDQNA--IATINQLAIERDVLNCRVIIAR 381 + + + I L+ A ++R + ++ IL+++ IA ++ ++ + Sbjct: 372 MTEEEIGFIALHIGAAYMQRVKPQKLRAILIANTQYPLIAGSVSRLKDQFSHRLDFVVEQ 431 Query: 382 SLS----------ELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 S +L+ ++IE L I L + I + ++ EQ+ H Sbjct: 432 STFTTDLSEFYDADLLITFDQIEHPLEIPTVRLGLFFNTQDEIQLIKVMNTLETEQMSHK 491 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + + E+FF Y+N++ + + ++ L+ ++ +T + ++ RE Sbjct: 492 IRSQIPDFMSEKFF-------YANIQPNNRDELLHEMGHHLIQENIVTKEFLNSVLEREN 544 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIF 551 LAIPH + +R L +P++ N+ + V++ + +++F Sbjct: 545 LSSTDFDYALAIPHPLRPESKRSMISIAVLKEPIQWNHFPVKLVILLALKEEDMEFMQLF 604 Query: 552 SYLASILCQHPAEIIAGLT--GYEAFME 577 P ++++ L E+F+E Sbjct: 605 LGWLGKQLDSPEKMMSLLEAKNVESFIE 632 >UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWK7_STRM9 Length = 628 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 81/614 (13%), Positives = 208/614 (33%), Gaps = 61/614 (9%) Query: 19 TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-GYQL--------EIFERRSF 69 T EL+ +S +T + I L+ L S + GY+L EIF S+ Sbjct: 19 TSTELSAHLKLSDKTCRKYIKELSEILKKHDITIISKTRFGYRLSGNILKENEIFNSDSY 78 Query: 70 FQLLQKHDNDDRLLALLLLNT-FTPRAQLASALNLPETWVAERLPRLKQRY-ERTCCLAS 127 + + L+ L+ + +A + + ++ + ++++ Sbjct: 79 KIPITSEERQIYLIDRLISEEGYIKLEDIAEKIYISVKTLSNDIKKIEKIIRTYNLEFER 138 Query: 128 RPGLGHFIDETEEK----RVILLANLLRKDPFLIPLAGITRDNLQHLSTAC---DNQHRW 180 +P G + E + +L L ++ F +++ L+ N Sbjct: 139 KPYYGLKLVGEELNIRNFLIDVLEKRLNENKFFDSKDRYDINSIAKLTYTFLRDKNVKIS 198 Query: 181 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEI---------------KQIVEHSGLFL 225 + + ++++ + Y + + +E+ + H+ Sbjct: 199 DISLQNLVAAIYVTFYRVEANKRIKSIDIEKNELFLSKKTHILECMKYIYNELSHNVDLD 258 Query: 226 GDNAVRTLTGLIEKQHQQAQVISA-------DNVQGLLQRVPGIASLNII-DAQLVENIT 277 ++ + + + + D +Q L+ V +++ D +L +N+ Sbjct: 259 SNDIEYITIHFLTSETLTYKSLKTEDINEVNDIIQELIYYVKLTFKIDLYNDEELYKNLY 318 Query: 278 GHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD---IPLFDSDLIG 334 H+L + + + + ++K P ++++ + L+ ++ + + + I Sbjct: 319 THILALCIRIRFGIKIKNPLLEDIKKNMPLEYNVATYVCNLISKRFNKRSLSEAEIGFIA 378 Query: 335 --LYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREE 392 L+ + + + + ++ ++++ + + + + I S + + Sbjct: 379 VILHMSKGININMSNKKNVLIVCPSGRGVSKFLIYTYSNFFSEYTNIISSCGANELVDMD 438 Query: 393 ---IEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL--ATAFIRQQPERFFSA 447 ++ + + + +D V + + I +IK+ L ++++ Sbjct: 439 LGNVDIIFSLIDLDMKIDKPVYK---INYFLNDEDILRIKNILKDNNNYLKEII------ 489 Query: 448 PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCW 507 P S ++ I + + +L+ ++ D I RE G I N +AIPH Sbjct: 490 PKSLFIYLDEIKNKDEIIKLVSDKLMKIPNMNNDIEALIHKREKLGMTEISNEVAIPHPI 549 Query: 508 SEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASIL-CQHPAEII 566 E PV+ N +N +L C KI+ I+ + I Sbjct: 550 GVIEGVNVIGVCISKNPVKWINNEVNIILFLCLDNKNNKNEKIYEAFTKIVGNKEIINDI 609 Query: 567 AGLTGYEAFMELLH 580 Y+ F+ +L Sbjct: 610 LLNPTYDNFINILE 623 >UniRef50_C9A5U2 Transcriptional antiterminator n=3 Tax=Enterococcus casseliflavus RepID=C9A5U2_ENTCA Length = 644 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 111/643 (17%), Positives = 225/643 (34%), Gaps = 71/643 (11%) Query: 4 ERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAGYQ 60 +R ++++L +Q P EL + +S RT+ DI LN L N A I GY Sbjct: 7 QRLDDLMEVLTRQTAPLPMKELTKSFSISERTVRTDIANLNDLLTNVGASIKLIRGQGYL 66 Query: 61 LEIFERRSF-----------FQLLQKHDNDDRLLALLLL--NTFTPRAQLASALNLPETW 107 L I + F L + L LL L + + Sbjct: 67 LSIGSKERFHDWWTESMSTTESFLTTSEERQAYLLFLLFKNENPLSLDDFLDRLFISKNT 126 Query: 108 VAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITR-- 164 L + + +RP +G + E + +++LL + L G T Sbjct: 127 FYSYLKTARDNLATYQLKIVNRPNIGFEVLGNEFAKRQAISDLLIEKDLQEYLVGFTEME 186 Query: 165 ---------DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ---LTDEWPQYP-- 210 LQ LS ++ L+ DY IL+ +AL + ++P Sbjct: 187 LELFDTIDLTRLQELSL--NHLAPLDLLDSDYYHKNILSHFALAISRFIAGHQINEFPLH 244 Query: 211 ---GDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQV-------------------IS 248 E Q V L D+A EKQ+ + + Sbjct: 245 VPALKEDAQKVVGHFLEEIDHAFDIQLTAGEKQYFIYYLAMNAPRLVETGDASDSSTKTA 304 Query: 249 ADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 V+ LL + ++ + D L++++T H+ + + A + ++ ++P Sbjct: 305 KAIVEELLTAIKQTSNYALETDKMLIDDLTSHIEGFINMNLMDARRSNPLLATIRKSFPQ 364 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALE----RHQNERQPIILLSDQNAIA 361 A+D+ L + + + + I L+ A A+E R+ ++ + I++ A++ Sbjct: 365 AYDLCLTHLETVSLKHGFYFSPDEIGYIALHIAGAMERSSIRNHHKHRVILVCGTGRAMS 424 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 I + I + + + S + + ++ + + + L +V + I + Sbjct: 425 RIIEAKIIKHY-QETIEVVDRFSYVELQQCDLSAIDFVITTVPLEQFSVPS-IYINMAKL 482 Query: 422 AAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 I +I+ F+ T + F + N + + +++ QL + + D Sbjct: 483 DKEIGKIEPFIETLSESKDGIYSLFQKAFFLHEN--HADKETLLKKMAQQLYQKDFVPQD 540 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVN-NEVINHVLIACA 540 + RE + I LAIPH + +R + V+ +++ V + Sbjct: 541 FYDSVKKREAINQTNINEWLAIPHPMTLMAKRSAVSVAIIPDGVDWGNGDLVKFVFLFAI 600 Query: 541 AADA-RHELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELLHK 581 D +I+S L ++ + + I + Y F+ + + Sbjct: 601 QKDEYEDTEEIYSLLLELMDREDIQQAILQKSDYHHFLSCIKQ 643 >UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7A6_THEAS Length = 646 Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 108/617 (17%), Positives = 203/617 (32%), Gaps = 89/617 (14%) Query: 14 EQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIF-ERRSFFQ 71 E + TP +LAQ+ G S RT+ + L L + + G + + +R + Sbjct: 14 EARDYTPLSDLAQRLGCSERTLRNHVRELEGPLRDRYGLILDRRPGRGVALLGDRSQVGR 73 Query: 72 LLQK---------HDNDDRLLALLLLNTF-TPRAQLASALNLPETWVAERLPRLKQRYE- 120 L++ + D R+L LL A++ A ++ L R + Sbjct: 74 LIRDLGGARDRPLEELDLRVLRFLLPRRCPVTMARVMEATGAGRGAISAALDRAEAWLAG 133 Query: 121 RTCCLASRPGLGHFIDETE------EKRVILLA-------NLLR-----KDPFLIP---- 158 L RP +G +I+ E R+ L+ + LR +DP P Sbjct: 134 HRIRLVRRPNVGLWIEGEEGALRLALSRLFWLSLGSHGFDDFLRGRVSMEDPIFHPGEMS 193 Query: 159 -LAGITRDNLQ----------------HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ 201 L R L+ HL+ + ++ L + Sbjct: 194 FLEARVRRALEMAQVRLTGEAVLGLTVHLAVSIKRVRTGGALEICRDEGLEGRREMEAAR 253 Query: 202 LTDEWPQ------YPGDEIKQIVEH--SGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQ 253 L W + P E++ + H S LG + L E + A ++ Sbjct: 254 LMARWVEEGLGVTMPPGEVEYLAMHVMSSRRLGCPGEKELARDAEAVARILLDHFARSLD 313 Query: 254 GLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 LQ D QL+ +++GHL + + +K A+ +F++ L Sbjct: 314 RRLQE----------DPQLLADLSGHLSTSINRLRCGFPSSNPILGQIKRAFCYSFEVGL 363 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALER---HQNERQPIILLSDQNAIATINQLAI 368 ++E + I L + + + L+ ALER + E + + I + + + Sbjct: 364 EGAARVQEDMGINLPEDEVGYVVLHVQAALERLRGMEEEVRAAVFCPQGVGILRLMEAKV 423 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 RVI A SL +L + E+ L+I+ + + ++ + + Sbjct: 424 SSAFPGVRVIGAGSLEDLKVVLEDR-VRLVISTVPLPAYLDCQHIVVTP-LLRDEEMRSV 481 Query: 429 KHFLATAFIRQ---------QPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHIT 479 + L S+ + I + A++ + Sbjct: 482 EDLLLCKVSSSPGRPAGGYPILRSMLSS--DLIFLGEDLGDRWDIICFLSARMAETGAVD 539 Query: 480 ADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV-LIA 538 D + RE + I +AIPH + R + +PV E + V ++A Sbjct: 540 EDYGGAALERERKSSTCIGGGVAIPHGSPRRVIRDSIALMRPRRPVLWGEEEVRMVFMMA 599 Query: 539 CAAADARHELKIFSYLA 555 ++D +F LA Sbjct: 600 LRSSDPGLVRGLFGELA 616 >UniRef50_B3W7W3 Transcriptional activator n=4 Tax=Lactobacillus casei group RepID=B3W7W3_LACCB Length = 636 Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 90/639 (14%), Positives = 215/639 (33%), Gaps = 75/639 (11%) Query: 1 MLNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 MLN Q +++ LL QP T +L+++ G S RT + +N + S G Sbjct: 1 MLNNNQQRLLQLLFESNQPLTANQLSEKLGCSVRTAKTYVAQINRL--AAEPLILSSRQG 58 Query: 59 YQLEIFERRSFFQLLQKHDNDDRL------------LALLLLNTFTPRAQLASALNLPET 106 Y E QLL +N + ++ L +L + Sbjct: 59 YVALKTEA---KQLLISTNNASDIPQTFRDRAFYIIKQSMIHKAQLDVFDLEESLFVSYG 115 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKD--PFLIPL---- 159 + + ++ Q + + + R + E+ + L+++ + ++ + Sbjct: 116 TLKNDIQKINQMFSKSGVRVVIRDN-KIQVTGNEKDKRRLISHFIMEEAPHHFVDRSLLT 174 Query: 160 AGITRDNLQHLSTACDNQ-HRWPLMQGDY-LSSLILAIYALRNQLTDEWPQYPGD----- 212 R +++ + + L DY L +L++ + + L + D Sbjct: 175 QNFNRTDVEQIEQIIKEELAPSTLKLNDYALINLMMHLLIMIQSLHHDDTLLSRDAYSSW 234 Query: 213 -EIKQIVEHSGLF-------------LGDNAVRTLTGL------IEKQHQQAQVISADNV 252 + + + L + + + + + V Sbjct: 235 LNTYDAAIVTKIIKRIENVFNLILNKHEREEIHMLFHANVDHLPLSDRDKLTTTVGDNIV 294 Query: 253 QG---LLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 + L V I +++ + V + HL + + + + +LK +P F Sbjct: 295 RAMSSLFAEVQHIFGIDLDNDYFVFPFSLHLNKLFSRAMQGSSLNSPLTESLKQDFPVVF 354 Query: 310 DMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLA 367 ++++ L + L IP+ + + I L+ L+R + + I +N Sbjct: 355 ELAVFVSFRLSQLLHIPITEGERAYIALHIGAELDRQKQHSEKIRTAIFSPNYMNLNTQL 414 Query: 368 IE--RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG- 424 + + + +++ + ++++ L+I A +T+ +T+ Sbjct: 415 YQHVSKQFEHDLNVVALVNDPSEL-DKLDVSLLITTVPQASSMA-YRVVTISPFMTSKEK 472 Query: 425 ------IEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHI 478 IE+ + + F+R+ + +F F + + +C QL +H + Sbjct: 473 STIMATIEEHRRNVQRDFLRRYFDIYFGEQFFFTLQPIMQRD--QVVTLMCDQLEHRHIV 530 Query: 479 TADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA 538 + Q + RE +A+PH + R+ + +N V++A Sbjct: 531 SPSFRQHVFEREEAAGTAFGT-VALPHSVYMEARQTTFSVGIAKNSIRWGERRVNIVVLA 589 Query: 539 CA-AADARHELKIFSYLASILCQ-HPAEIIAGLTGYEAF 575 D + + ++ L ++ + A +A + +E F Sbjct: 590 AISQNDQQRFMHLYEALITMFSEPQVATALARVRNFEQF 628 >UniRef50_B9DT71 Transcriptional regulator (Antiterminator) n=1 Tax=Streptococcus uberis 0140J RepID=B9DT71_STRU0 Length = 617 Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 89/623 (14%), Positives = 216/623 (34%), Gaps = 52/623 (8%) Query: 2 LNERQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTLNG-KARIFASGSAGY 59 + E+ +I++LL + + +L+++ G+S +T I L+ L A I + GY Sbjct: 1 MEEKYFEILELLSEDSYCSSVKLSEKLGISEKTARTRIKELDHQLETFGATITSKRGLGY 60 Query: 60 QLEIFERRSFFQLLQKHDND-------DRLLALLL-LNTFTPRAQLASALNLPETWVAER 111 L + +++ F + + + + D L LL + + +++ L + + + Sbjct: 61 SLVVTDQKQFLESVNRSSKNRSDGDVQDELFRFLLDMEDYQTIDDISAQLYISRSVLTNY 120 Query: 112 LPRLKQRYE-RTCCLASRPGLGHFIDETEE-KRVILLANLLR--KDPFLIP------LAG 161 L +++ + + +P G I +E KR + N L D LI + G Sbjct: 121 LKKIEALLKLYDLSIDRKPHYGIKIIGSEANKRTCIQTNNLYPLDDRDLIRKLMDYIIVG 180 Query: 162 ITRDNLQHLSTACDNQHRWPLMQGDYLSSL--ILAIYALRNQLTDEWPQYPGDEIKQIVE 219 + + A + + ++ + I I R +++ + D I I + Sbjct: 181 NQKYQVYMSEVAMEALINYIMISISRIKHHFPIEQIKTDRQEISQASQKIISDYINFIFK 240 Query: 220 HSGLFLGDNAVRTLTGLIEKQ-------HQQAQVISADNVQGL----LQRVPGIASLNII 268 + ++ L + I + + L L RV + +L+ Sbjct: 241 ETKVYFNQYERDYLALQFTSKLASNSLSKFGPNFIISSQIDQLTFEMLDRVYKLLNLDFR 300 Query: 269 DA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLRE--QLDI 325 + +L ++ HL+ + ++ +P + ++ +T+L E Q DI Sbjct: 301 NNLELRMALSQHLVPMDIRLRYNIMLENPLSEQIQKEYPFPYTIASTAVTVLNEFYQKDI 360 Query: 326 PLFDSDLIGLYFACALERHQ---NERQPIILLSDQNAIATINQLAIER---DVLN-CRVI 378 + I L FA A E+ ++ +++ + + + + + D +N Sbjct: 361 SQGEMAYIALIFALATEKRNRDIAKKNILLVCISGTSSSQLFKYKYLQAFGDYINKVYES 420 Query: 379 IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIR 438 L I+ + + + I I K F Sbjct: 421 SVSDLDFFDFKGNHIDYIFTTVPLSKKYPIPIY---EINLFIDTNDILTYKQFFEEGEKN 477 Query: 439 QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV 498 + + + + +++ + + +Q+C + + ++ RE G+ Sbjct: 478 YLLDYYST---NLFLPHLKASTKEDALKQMCQHISRYGITPDGFYEAVLQRESLGQTAFG 534 Query: 499 NRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASIL 558 + +A+PH + + L +P+ + I + + + L+ F S + Sbjct: 535 D-IALPHPYKVLTEKSFVCVAILEEPIFWETKEIQVIFLMSIGKEKADSLEEFYKTTSNI 593 Query: 559 --CQHPAEIIAGLTGYEAFMELL 579 + + + +E ++ L Sbjct: 594 MFNEEAVKALIETPTFENLLQQL 616 >UniRef50_Q928S7 Lin2455 protein n=4 Tax=Listeria RepID=Q928S7_LISIN Length = 638 Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats. Identities = 106/637 (16%), Positives = 225/637 (35%), Gaps = 63/637 (9%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 MLN+RQ I+ L + +LA +S RTI DI + + G+ IF S G Sbjct: 1 MLNQRQKNILSTLYNENNWLLGKKLADLFQISDRTIRNDIRVIKENI-GEDFIFTSKKLG 59 Query: 59 YQ--------LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 Y +++ E F Q + +L+ LL++ + A+ E+ + Sbjct: 60 YAYNMEKPFPVDVEEEAGFEQ-----NRMAQLIKKLLVDDGVDIYEYATETYTSESTIQR 114 Query: 111 RLPRLKQRYER--TCCLASRPGLGHF-IDETEEKRVILLANLLRKDPFLIPLA------G 161 + L+ +E+ + G + I T ++ LL + + D L + Sbjct: 115 DIQWLRGYFEQLLGLDVVIHSSDGIYAISATPTTKMELLNRIAKLDESLKTILITNCFPE 174 Query: 162 ITRDNLQHLSTACDNQHRWPLMQGDY---LSSLILAIYALRNQ-------------LTDE 205 I + + + + N+H+ L D L+ +I + L+ L + Sbjct: 175 INNEKIHQILSKIINKHKIVLKYFDETILLTQIIYSSGFLKKHPEQSTVTEIDNPFLREL 234 Query: 206 WPQYPGDEIKQIVEHSGLFLGDNAVRTL-TGLIEKQHQQAQVISADNVQGLLQRVPGIAS 264 + + I F+ + + E Q V+ + Q +L + I Sbjct: 235 FDAIEQEAGYGISAEMKQFILTEYEKIVAMNNFENQVTTKMVLEGELYQEILLILEEIKH 294 Query: 265 LNIIDAQLV----ENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 + +ID ++T H+ L + + + + D+++ L Sbjct: 295 VYLIDFTTDLEVTSDMTKHIFIALERAKRGIVIKNQVTHIITQQYSYLLDIAIFIGEKLL 354 Query: 321 EQLDIPLFDSDLIGL--YFACALERHQNE-------RQPIILLSDQNAIATINQLAIE-- 369 E+L + L ++I L Y + + + R I+L + A+ + + E Sbjct: 355 ERLGVILNQEEIILLVMYLYQYYRKIEAKHQLNQVVRIAFIVLEGKAAMYYLREQLAEVL 414 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 R V + I + + + E ++ L I+ L V + NI + K Sbjct: 415 RPVNVEVIEITDNTQCQLLLSENVDVDLCISTKKIDLPAEVPCIVLSNNIGLIEEVTIKK 474 Query: 430 HFLATAFIRQQPERFFSAPGSFH----YSNVRGESWQHITRQICAQLVAQHHITADEAQR 485 AT + + + H +N + + + +++ ++ ++ Sbjct: 475 QLSATIEANKMKKFAYIKEKYLHEDLFLTNYEYDQKYNAIDFLSEYCISKGYVPTSFTEK 534 Query: 486 IIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADAR 545 + +RE I +A+PH + F + +P+ +N ++ ++I Sbjct: 535 LFSREQLFSTAIPTGIALPHPIKNVAIKSGIFICIMKKPITWDNHKVSLIMIPMIEELDG 594 Query: 546 HELKIFSYLASIL--CQHPAEIIAGLTGYEAFMELLH 580 E + + S++ + E I+ + Y +ELL Sbjct: 595 TEAPLINDFLSLIASNKSYVEQISKCSTYRECVELLQ 631 >UniRef50_B1CAC3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAC3_9FIRM Length = 650 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 93/653 (14%), Positives = 226/653 (34%), Gaps = 85/653 (13%) Query: 9 IVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQLEIFE 65 ++ LL T EL+ + GVS RTI D+ LN+ L S GY L+ Sbjct: 1 MLKLLISSEGYITGPELSNKLGVSDRTIRNDVGILNYVLEQYNCQVISKRGKGYILKSEN 60 Query: 66 RRSFFQLL---------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLK 116 + +L +K D ++ LL ++ +L + T + + +K Sbjct: 61 KELLNSILSQYSGYKNQKKERVYDIIIMLLCEKNNVDLYEIEDSLFISRTTLENEIQNIK 120 Query: 117 QRYE-------------RTCCLASRPGLGHFIDETEE-------KRVILLANLLRKDPFL 156 + + + + + L ++E +++ + +K+ F Sbjct: 121 EMLKSFYPSIDLRREKGKIELIGNETTLRFLLNEILMLKYDSKKQKLFIQNKYFKKESFE 180 Query: 157 IPLAGITRDNLQH-----------------LSTACDNQHRWPLMQGDYLSSLILAIYALR 199 + +++ L++ ++ ++ + D ++ +Y + Sbjct: 181 VIRDNVSKIALKYHLDIDDSAVADIAVYLLIAKVRLKLNKRIIKLKDEVNKDNDILYKIG 240 Query: 200 NQLTDEWPQ------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQ 253 +L E + Y +EI QI N L E+ +Q + V+ Sbjct: 241 EELYKEILEDKSENDYKQNEINQIAVK---LSFVNLFTPLNLTREEAKRQMPSQIIEIVE 297 Query: 254 GLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 L+ + L++ +D +L + H+ + + ++ +K + F++S Sbjct: 298 SLISNIKDDYDLDLSMDDELFMGLIFHVRALINRVKYQQLVESPILDMIKKQYTFIFELS 357 Query: 313 LHFITLLREQLDIPLFDSDL-------------IGLYFACA------LERHQNERQPIIL 353 LH + ++ L I L +S+L + L++ A + +++ Sbjct: 358 LHIYEIFKKVLGIKLTESELSYIAAHIAAAIERMRLHYGKAGVKIAIISHMAPSYTKLLV 417 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSELVA--IREEIEPLLIINNSHYLLDDAVN 411 + +N + ++ V + + S +++ E + I + L + Sbjct: 418 SNLKNIFSQNIEIIGSYPVYKIDEALEENPSIILSTCKIENLNIPANIKHMEISLVLSNE 477 Query: 412 NYITVKNIITAAGIEQIKHFLATAF-IRQQPERFFSAPGSFHYSNVRGESWQHITRQICA 470 + ++I E + + A I + F+ F N+ + + I Sbjct: 478 EQQILASLIEDVRSEFVYKKSSKAENIDESIINKFNKDLFFP--NLNVNTKEEALSLISN 535 Query: 471 QLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE 530 ++ + ++ D +++ RE ++ N +AIPH + I+L + + + Sbjct: 536 VMLLKGYVNNDFLDKVLEREKLSNTVLDNMIAIPHPVEACANKTIIGVISLPKAITWGDY 595 Query: 531 VINHVLIACAAADARHELKIFSYLASILCQHPAE--IIAGLTGYEAFMELLHK 581 + + + D + ++ S L + + ++ F+E + K Sbjct: 596 KVKLIFVLAVRKDEKAYMRNVFKFISRLMDDKNKVDKLVNSKTFKEFIESVKK 648 >UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U731_9LACT Length = 641 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 91/649 (14%), Positives = 216/649 (33%), Gaps = 81/649 (12%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA--SGSA 57 + R+ +++ LL + +A++ G+S +T+ R+I +N L S Sbjct: 4 FSNRKKEMLSLLLKSDEYIKSDYIAEEIGISSKTVQREIKNINVLLRELKTDSIESSRGK 63 Query: 58 GYQLEIFERRSFFQLLQKHDNDDRLLALL----------------LLNTFTPRAQLASAL 101 GY + + ++S + + +++ D L+ + + +LA L Sbjct: 64 GYIIPLESKKSIQLVFKDYEDKDALVPNMQQSRIEWIIRKFAVLSMEKKECTLEKLADEL 123 Query: 102 NLPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLLRKDPFL--- 156 + T + + + +K ++ LA G + E+ R +++ L+ + L Sbjct: 124 FVSLTTLKKDMNSVKDTLQKYHIQLAKISNKGLKLQGEEKNIRQLIVDYLVLEQSELKLD 183 Query: 157 -------------------------IPLAGITRDNL--------QHLSTACDNQHRWPLM 183 IP+ I NL L ++ + P Sbjct: 184 RIFSISSTDKVSVEEIVIRNIRKYQIPITDIGFRNLIIHVEIAISRLRFQNNSIDQKPNT 243 Query: 184 QGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQ 243 ++ A + P +EI I H + + + + Sbjct: 244 IEEHSDEYYCAKAIAKEIEAKINLTIPENEIANIYLHLL------GQKRMLVSEDTLESR 297 Query: 244 AQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 + ++ ++ ++ + + L+ D L + HL L + +K Sbjct: 298 LETPESELIERVIVEINEMYQLDFRQDVILKNGLLLHLESALHRIRLNMPINNELIEEIK 357 Query: 303 AAWPAAFDMSLHFITLLREQLDIPL--FDSDLIGLYFACALERHQN-----ERQPIILLS 355 +P ++ + L +I + + + L+F ALER + E + +++ + Sbjct: 358 NNYPFPMQLAKILASSLETNFNIKIDINEVGFLTLHFCGALERANSIQSNKEIRAVVVCT 417 Query: 356 DQNAIATINQLAIERDV-LNCRVIIARSLSELVAI-REEIEPLLIINNSHYLLDDAVNNY 413 + + + ++ LN +V+ +L +L I +I+ ++ Sbjct: 418 TGLGTSVLLKAKLQSKTNLNIKVVGVYALYQLDDIEFTDIDIIISTVPLSKKYSIP---D 474 Query: 414 ITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLV 473 + + I++ IE+I F+ F F +++ ++ + +L Sbjct: 475 VVITPIVSNNDIEKIHEFITYGSNEFSISSLFCKELFF--TDLNCKTKDECLSIMTDKLY 532 Query: 474 AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVIN 533 I + I ARE I N + +PH + R L P+ + Sbjct: 533 QLSFIDDKCKESIYAREEMATTEIGNGVCVPHNMDGKVFRSSICIGILKDPILWEFGKVQ 592 Query: 534 HVLIACAAADA-RHELKIFSYLASILC-QHPAEIIAGLTGYEAFMELLH 580 +++ A R ++F + + Q+ + + +L + Sbjct: 593 LIIMIVVDKKAIREYNELFLEIYEKVDFQYKVDEFIKQKDFNYLKKLFN 641 >UniRef50_C5EEI0 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEI0_9FIRM Length = 635 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 93/627 (14%), Positives = 199/627 (31%), Gaps = 67/627 (10%) Query: 9 IVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTL----------NGKARIFASGSAG 58 ++ L+ T +LA VS +TI DI +N L G+ G Sbjct: 10 LMKLIRDGSCTIRQLALLCDVSYKTIQNDIKDINRKLGQNGFACKIVTQSGVGVVLGNTG 69 Query: 59 YQLE------IFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERL 112 + ++ K R+ LLL + + L L T AE L Sbjct: 70 DECLDEVCALFQDKGEARGEYDKEYESLRIAYWLLLEDYVKMDDICEKLALSRTVTAELL 129 Query: 113 PRLKQRY-ERTCCLASRPGLGHFIDETEEK-RVILLANLLRKDPF----LIPLAGITRDN 166 + KQ +AS+P G + TE R+ L +L+R+ L+ + I Sbjct: 130 NQSKQLLKAYGIQVASKPYYGLYAKGTESSIRIFLFEHLIRRSGKDVACLLGDSQINPAL 189 Query: 167 LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ----------------------LTD 204 ++ + N + + + L L+ + + + L++ Sbjct: 190 MEGVVVLIRNHN--VSVTDEILEQLLCYVEIMAIRIRKQAHIEAGLVERDVTSFESILSE 247 Query: 205 EWPQYPGDEIKQIVEHSGL-FLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIA 263 + E+ +E + ++ V L + + + +L+ Sbjct: 248 KIAVTVSYELDTRIEEPEVDWIYRFVVGKLQNKASQDEETDSAVLESVFHAILELCQEKY 307 Query: 264 SLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 + D +++ HL ++ +K A+D++ L+ ++ Sbjct: 308 GYDFSQDIDFYSSLSIHLNALFKRARNNNYSINPMIDEMKTYSLLAYDIAFDLSLLINDR 367 Query: 323 LDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLA--IERDVLNCRVI 378 L + L D + + +Y A+ER + P LL +++L + + Sbjct: 368 LGVCLPDDEISYLAIYLHLAIERKKRNIVPKRLLVVCPTGRGMSELIGYHIKKQFGEYIS 427 Query: 379 IARSLSELVAIR---EEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 ++ + + L + + V + + + I+ K + Sbjct: 428 ELKTCGYYELDHVDYSQYDYLFTLKPLERTVPLPVIEFA-----LDESSIKSAKRKVLGK 482 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 + F +++ RQI ++ + + ++ RE Sbjct: 483 HDKLPLLCMTPQELFFP--DIKAADKPDALRQIIERVGKAVKLKESFYESVMEREKIVAT 540 Query: 496 LIVNRLAIPHCW-SEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYL 554 + N A PH ++ L+ P+ + I VL+ +L+ F Sbjct: 541 ELPNGFAFPHPLGTDMAECSFFSISVLSNPIRWKHRKIQIVLLTYVKGKVTSDLEQFYES 600 Query: 555 ASIL---CQHPAEIIAGLTGYEAFMEL 578 + L ++ +I T YE +E+ Sbjct: 601 FATLVSNKEYAVSLIENPT-YEKLVEV 626 >UniRef50_B9YAP5 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAP5_9FIRM Length = 651 Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 99/632 (15%), Positives = 205/632 (32%), Gaps = 61/632 (9%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 L++RQ + LL Q+P + +Q VS RT+ ++ +N I S GY Sbjct: 24 LSQRQYLALRLLREYQKPIKGQQFSQLLNVSPRTLRYEVSAINRI--AGQPIILSNKEGY 81 Query: 60 QLEIFERRSFFQLLQKHDNDDR-----LLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 L + Q+ +DDR L+ LL L L + E+ + + R Sbjct: 82 TLN-EDPAVLQQIQDCRVDDDRQLEKQLILALLECKEASIYDLTQKLYVSESTIYSLVKR 140 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN------LQ 168 + ++ R G E + +L++ + + + D L Sbjct: 141 MMPKFHSFSLSLQRRGEWLSCQGKETDKRRMLSHFFFAEANALATTLVNFDGYFSPFGLA 200 Query: 169 HLSTACDNQHRWPLMQGDYLSSLILAIYALRN--QLTDEWPQYPGDEIKQIVEHSGLFLG 226 L+ +Q D + + I ++ + +P + + S L Sbjct: 201 ELAQIIHETLDELDVQIDDIYIKNIIICIAVCVQRMINGYPSDGSETEADALPISTSPLL 260 Query: 227 DNAVRTLTG-------------------------LIEKQHQQAQVISAD-NVQGLLQRVP 260 V T G E+ Q Q ++ LL + Sbjct: 261 TRFVDTTCGRLQEQLELTFTEADKATILAFITGSFPEENEQILQNERFRGQIRKLLDKTF 320 Query: 261 GIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 L + + + +N H+ L +L+ + P +D++++ L Sbjct: 321 RHFQLELDYSAVFDNFVLHVHFLLLRCRHQNFFHNDFATSLRTSHPFIYDVAVYLAYQLE 380 Query: 321 EQLDIPLFDSDL--IGLYFACALERHQNE--RQPIILLSDQNAIATINQLAIERDVLNCR 376 ++ + ++ I +Y + I + + + + + + +C Sbjct: 381 KEFQAAIPGDEIGLIAIYLGSIATYVPTYDLPRVICICPQYHELRKLMVQQLTEKL-SCT 439 Query: 377 VIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT-- 434 + I + +S L I ++ ++ ++++ + I + I++ I +I+ Sbjct: 440 LDIVKIVSSLSEITDQDHADFYLST--VKTENSLTDLIPISPILSPLEIHRIEKKNLEFM 497 Query: 435 -----AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 +RQ RFF F N + I L + I + R Sbjct: 498 KAQKRRKLRQNLLRFFDDQLFF--CNHGLTTEVEILTFFDQLLQQRGVIDNQFMDSVRQR 555 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELK 549 E NR A+PH + + + +P+ + +N VL+ + +D K Sbjct: 556 ESLSSTAFFNRFAVPHSLEKDALLTKVVYYYSDEPIRWYDSRVNLVLLILSRSDDEQASK 615 Query: 550 IFSYLASILCQHPAEIIAGLT-GYEAFMELLH 580 I++ + IL L + M+ L Sbjct: 616 IYNLIFDILIDESCYKKMILCRSRQELMDFLE 647 >UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_9MOLU Length = 613 Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 96/619 (15%), Positives = 210/619 (33%), Gaps = 48/619 (7%) Query: 1 MLNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 M+++ Q I+ L + L+ +S R++ I +N + SGS GY Sbjct: 1 MMDKNQKMIILELMNHETVSGSNLSSVIKMSTRSVRTIIKNINEDI--CGAKIESGSFGY 58 Query: 60 QLEIFERRSFFQLLQKHDNDDRLLALLLL-------NTFTPRAQLASALNLPETWVAERL 112 +L I +F LQ+ N L L N + L L L T + + L Sbjct: 59 RLTIETPETFLAYLQRDQNGKEESRLAYLFNRFIDCNNYLKIDDLCDELYLSRTQLKQSL 118 Query: 113 PRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLS 171 L++ +A++ G +++ E + +A+ + + RD + +S Sbjct: 119 KELREYLHDFDLTIATKAYYGMYLEGDEINKRRAIAH-FEEYQMDFDILQRIRDIV--IS 175 Query: 172 TACDNQHRWPLMQGDYL-SSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSG---LFLGD 227 + + + D L + L +A Y + + +EIK+ E+S + Sbjct: 176 SIANADYVISDDVLDNLVAHLYIAYYRVMKKEYANIDSEWLEEIKEEKEYSLGCAIMELM 235 Query: 228 NAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-----------------DA 270 N + + IE+ + N + L L+I+ D Sbjct: 236 NKIMAMEYRIEEVAYLTMHLCGKNSKQLSNNYINQEILDIVKEMLMIIEKVANIPFQADL 295 Query: 271 QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDS 330 L ++ HL+ + + + +K+ A+++++ ++ ++ + L + Sbjct: 296 NLQLALSLHLIPLVKRIQYGTFMHNPLKDEIKSKLIMAYELAVKACVVINQRFNCTLSED 355 Query: 331 D--LIGLYFACALERHQN--ERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSEL 386 + L+ +LE+ + R I+++ + ++ N + S Sbjct: 356 EIAYFALHINLSLEQKKYNFHRNNILVVCSSGVGSARLLEYFFKENFNDYIEHLEVCSLH 415 Query: 387 VAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFS 446 E+E + + + + + + I Q T ++Q + Sbjct: 416 -----ELENISLTKFDCIFTTVPLAIKVNIPIFLINNLINQRDTIKITNNLKQLNQANIL 470 Query: 447 A--PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIP 504 P ++ S + +I + + + AD Q ++ RE + +A P Sbjct: 471 DYFPEQLFFTYESFSSKEEAIHEIINECKKSYDLPADFEQYVLQREALATTEFNDLIAFP 530 Query: 505 HCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAE 564 H L +P+ I +L++ A EL F + S + Sbjct: 531 HSNKPVSNATFVAVTILKKPLLWKKHKIRIILLSAIENKAIKELDDFYKIISNIISDSTI 590 Query: 565 I--IAGLTGYEAFMELLHK 581 + Y+ F E++ + Sbjct: 591 QWNLINNPNYQYFKEIIER 609 >UniRef50_A8SDV4 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDV4_9FIRM Length = 632 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 94/637 (14%), Positives = 208/637 (32%), Gaps = 69/637 (10%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTIL---RDIDYLNFTLNGKARIFASG 55 ML+ + ++ L Q + ++A V+ RTI R + R Sbjct: 1 MLSTKD--VIQYLNQHGNVQAIEDMAAFFSVTPRTIRNHLRSVQDAYPACLQVGRGQVKL 58 Query: 56 SAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLN-TFTPRAQLASALNLPETWVAERLPR 114 Q+ S + + +L LL +LA++L + E + + Sbjct: 59 LK--QIPEESSPSAQVPSSQQERSRYILRALLSRSEPMDLDELAASLFISEVTLQNEVKL 116 Query: 115 LKQRYERTCCLASRPG---LGHFIDETEEKRVILLANLLRKDPFLI------------PL 159 ++ L+ R L E ++KR+++ L+ + Sbjct: 117 IRHEIAE-YHLSLRTKNNTLFISGSEKDKKRLMIHLIYNEAQHTLVSMETLHAIFPRYDI 175 Query: 160 AGITRDNLQ-------------------HLSTACDNQHRWPLMQGDYLSSLILAIYALRN 200 I D L H+ D P +S+ ++ + Sbjct: 176 QKIRSDILACLNSQHFFIDEYSLTNLLLHMLITMDQLGTAPNAPRYEVSTDLIELNRHFV 235 Query: 201 QLTDEWPQYPGDEIKQIVEHSG-----LFLGDNAVRTLTGLIEKQHQQAQVISA-DNVQG 254 + D E + S L L AVR + + + S V Sbjct: 236 SIIDSICTELEREYGIVFTRSNKYQFTLLLMTRAVRNQDVSLPSRATLSIHPSTMRLVDS 295 Query: 255 LLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 ++Q V + +++ D H+ L ++++KA P +D++++ Sbjct: 296 IVQAVKQVYDIDLTDIDFFIPFALHIDNMLVRIRQNVSVHNPLLHSIKAMSPIIYDIAVY 355 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALE---RHQNERQPIILLSDQNAIATINQLAIE 369 L+ Q + L + + I L+ ++ + + ++L + Q Sbjct: 356 ISNLINHQEHVQLCEDEIAYIALHIGARIQDIYNRRGKLCAVLLCPQYYSYDHR-QFDRL 414 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 + + + I ++ + ++ +I++ + V + + N I++ + I Sbjct: 415 QSYFSDDLTIESVVTAPHELA-GLKCDMILSTLPLTAEPPV---VLISNFISSNDRQAIS 470 Query: 430 HFLATAFIRQQPERFFSAPGSFHYSNV-----RGESWQHITRQICAQLVAQHHITADEAQ 484 + ++ ER S + +++ + R I Q+ A+ + + + Sbjct: 471 DVIHRLKAAREKERLISLLQTLIDADLFTPGADYADRESAIRTIGGQMCARGIVPQEFIE 530 Query: 485 RIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA-AAD 543 + RE +AIPH + R L +P+ + + + C +D Sbjct: 531 STLEREQISPTNFG-MIAIPHPSDCRAARSAIAVSLLRKPLSWGTSSVRIIFMICVSKSD 589 Query: 544 ARHELKIFSYLASILCQHPA-EIIAGLTGYEAFMELL 579 IFSYL + + E +A + Y F+++L Sbjct: 590 LSDFSDIFSYLPRVCSDYKTLEQLASASSYPDFIQIL 626 >UniRef50_C9XQF7 Transcription antiterminator n=6 Tax=Clostridium difficile RepID=C9XQF7_CLODC Length = 664 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 87/630 (13%), Positives = 203/630 (32%), Gaps = 62/630 (9%) Query: 3 NERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQL 61 ++++L + + Q LA VS R+I + ++ +N T S GY++ Sbjct: 31 SKKELFLNFIKTQHDWIDSSTLANYLNVSTRSIRKYVNEINST----GEFILSSKKGYKV 86 Query: 62 EIFERRSFFQLLQKH-DNDDRL---LALLLLNTF-TPRAQLASALNLPETWVAERLPRLK 116 + ++ D+RL L L++N+ L+ L + + + + Sbjct: 87 NLNNNCQTKVDSSENISPDNRLNLILKELIVNSNGINIFDLSEELFVSPATIEGDIVKAN 146 Query: 117 QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDP-----FLIPLAGITRD-NLQHL 170 + + + E + L+++++ K+ L + I ++ NL L Sbjct: 147 KFIGSYNLKIKQSKFLLKLIGNESAKRKLMSSIIFKETGSDFLSLFDVQKIYQEYNLTKL 206 Query: 171 S-TACDNQHRWPLMQGDYLSSLILAIYALRN------------------------QLTDE 205 ++ L +Y + IL + ++ + Sbjct: 207 KENIIYILKKYNLFINEYAINNILLHLMITIDRIKKNNYIESVEVVNYIDNNNDISISRD 266 Query: 206 WPQYPGDE----IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS---ADNVQGLLQR 258 + E + + +F N L I + +++ Sbjct: 267 ISNFLESEYNLTLTSAELYYLVFQLTNKTTVLNYHEMDTKSLPNYIDEHFVKLTKKIIKN 326 Query: 259 VPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 V + +++ D + V T H+ ++ R LK ++P +D+S++ Sbjct: 327 VYDLYFIDLSDDEFVVKFTLHVKNLISRAKNNQVLRNQIPQKLKDSYPLIYDISVYICNQ 386 Query: 319 LREQLDIPLFDSD--LIGLYFACALERHQNERQPII--LLSDQNAIATINQLAIERDVLN 374 ++ +I + + + I L+ +R + I+ L++ + N Sbjct: 387 IQILENIEIDEDEISYISLHVGSFFDRQKLLEDKILCALITPNYYDLQFKIVRDLEKRFN 446 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA------GIEQI 428 + I + S+ + + + ++I + + QI Sbjct: 447 ESIEIIQIFSDTHNLDFDNKVDMVITTLPISDRCPIPFVYVNPYLNRKDYDNIQSKFIQI 506 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 K ++ E +FS S N+ +S + + + L ++ + ++ Sbjct: 507 KDRKNILTVQNHLEMYFSE--SLFMKNIYLDSAKDYIKFMGNILYKNKYVKPNYIDDVLI 564 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE N +AIPH + I +PV+ E + + + + + Sbjct: 565 REKMSSTAFNNNVAIPHSMKMDALKTGVCLIVNDKPVKWGEEKVQIIAMIPINEKEKEKF 624 Query: 549 K-IFSYLASILCQHPAEI-IAGLTGYEAFM 576 IF IL + + Y +FM Sbjct: 625 NYIFESFIEILSEWNNVKELTKADNYSSFM 654 >UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A0_9FIRM Length = 654 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 71/502 (14%), Positives = 173/502 (34%), Gaps = 41/502 (8%) Query: 59 YQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQR 118 + +++ +R++ LQ + + RL + ++ E + + + Sbjct: 147 FNIQLSIKRNYGISLQGSEENKRL--------AIKHLVINDPIHSVEQSIQQFAKGINLE 198 Query: 119 YERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQH 178 ++C E K ++L A L ITR + L + + Sbjct: 199 LLKSCIADIEKEWNFTFAEESYKSILLYAAL-----------AITRSDFSVLHLSESEEE 247 Query: 179 RWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIE 238 L+ I I + P E+K L + T + Sbjct: 248 IVVKYNEYNLAQSIFRIIN-----KKFYVNIPESEVKYFAIQ---LLCSKMIHTQEIPAK 299 Query: 239 KQHQQAQVISADNVQGLLQRVPGIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSS 297 ++ V ++ + I +++++D +L + H+ + + + Sbjct: 300 EELTSYDKKLKQFVHKIISVISDIMNVDLMDDNELYYGLLNHIRPAIFRMKFEKHSTKEL 359 Query: 298 MNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLS 355 N ++ + + +S L E DI + ++ I LY +LER +P+ + Sbjct: 360 TNFIQQEYKQTYRVSWALSALFEEYYDIKITSTELSYITLYIQTSLER---RMRPLKIAL 416 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 +NQ+ + ++ I ++ ++ ++ + + LD + Sbjct: 417 VTELGMGLNQMFCNKIRMSIPKIDEIAIFSYHEVKIDVVGKYDLIVTTSKLDFDQEKVVQ 476 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQP-ERFFSAPGS------FHYSNVRGESWQHITRQI 468 +K++++ G+E++K + +Q +R F + + + +++ Sbjct: 477 IKSLLSNTGVEELKQKIEIIRTQQLMDQRKFDPRCHNLFDPKLILIHPMVSDKEELLQRM 536 Query: 469 CAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVN 528 L A ++T + ++ RE I N +AIPH + + L +P+ N Sbjct: 537 NQVLNAGGYVTEHYIKSVLDREKTVSTYIGNGVAIPHGFQTYVNESKVVIAVLKEPLAWN 596 Query: 529 N-EVINHVLIACAAADARHELK 549 + + + V + + +E K Sbjct: 597 STDEVRLVFMLALRINNAYESK 618 >UniRef50_B9Y2V8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2V8_9FIRM Length = 633 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 99/631 (15%), Positives = 224/631 (35%), Gaps = 64/631 (10%) Query: 1 MLNERQLKIVDLLEQ---QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-- 55 ML +RQ ++ L + Q + LA G+S RT+ +I + + + + Sbjct: 1 MLTQRQQGLLRWLAENGGQYHSAATLAAAHGISVRTVKSEIAAIRLEIKHSPALELTSLP 60 Query: 56 SAGYQLEIFERRSFFQLLQKHDNDDR--------------LLALLLLNTFTPRAQLASAL 101 S GYQL I + LL + + LL LL + + + +L + L Sbjct: 61 SKGYQLIIHDPPQAAALLDRMQKTSQNAALNEQPIRIKTILLNLLDHSGYVRKRKLQTQL 120 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEE-KRVILLANLLRKDPFLIPL 159 N+ ++ + L +++ + LA R G G+ ++ E KR L + ++ Sbjct: 121 NISDSTLYLDLKAVRKILNKYNLELAYRSGSGYRVEGRETDKRTCLAREDIYS---MMEE 177 Query: 160 AGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALR-----NQLTDEWPQYPGDEI 214 A T+ NL+ ++ + L +S ++L L ++ + G Sbjct: 178 AHETQANLKRITDLKELLVEIFLENEYKISEVLLESLILHLLLTLQRIERGYFIEAGTTK 237 Query: 215 KQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN-------------------VQGL 255 + E GD R + + + ++ ++ + + Sbjct: 238 RNGGEKETRIAGDILRRCTSVPVSRLSEEINYLAVNLRGKRDYDDYSGVSEEINAFIMDS 297 Query: 256 LQRVPGIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 L+++ ++ + L + H + L+ + + + +K +P AFD++ + Sbjct: 298 LEKIHVEYGVDFTRSIDLKIALALHFVPLLSRMQNNRQLKNVLLTEIKQTFPFAFDIANY 357 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALE--RHQNERQPIILLSDQNAIATINQLAIER 370 F L+ + + + + + LYF LE +E + I+++S TI Sbjct: 358 FSLLIDDHYHVRISEDEAAYFTLYFNYGLENITMNSEGKKILVISRLKPSETILLRQKID 417 Query: 371 DVLNCRVIIARSLSELVAIREE---IEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQ 427 +++ ++ L R + + L + A + + Sbjct: 418 QWFRKQLLQLDFVNPLDLSRIDPGAYDALFTTETKDTVTRGAAVRISLFP---SEKDFAK 474 Query: 428 IKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 + + FS+ + ++ Q I ++ A +H+ + ++ Sbjct: 475 MNLAINGYDSVDSILSRFSSDLFWRGQ---AKNRQEIVARLIAMASRSYHLPKKFEELVL 531 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARH 546 RE +++A+PH + L +PV ++ + VL+ + Sbjct: 532 EREKLSSTYFGSQVAMPHPLYPITAQTFIAVAVLDKPVAWTEDQKVRIVLLVSTEMNNPK 591 Query: 547 ELKIFSYLASILCQ-HPAEIIAGLTGYEAFM 576 +++ YL+S++ I + YE F+ Sbjct: 592 AFQLWPYLSSLISSPQQIHEILRESTYENFI 622 >UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JT03_LACRH Length = 598 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 75/544 (13%), Positives = 187/544 (34%), Gaps = 49/544 (9%) Query: 74 QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGH 133 +LA LL + +L+S + + +A + +K+ + + G Sbjct: 56 DSKSRKYAILAQLLNDKHLSYQRLSSDYLVSRSSIANDIAFIKRLLAKDNVALNFDNTGT 115 Query: 134 FIDETEEKRVILLANLLR-------KDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGD 186 FI+ EE++ ++ ++ + L + + + + + Sbjct: 116 FIEGNEEEKQKIIKRVVATTLEGKHERSVLEMFVDPSLIRIIRKTLVSKVHDLDLEVPEN 175 Query: 187 YLSSLILAIYAL--RNQLTDEWPQYPGD----------------EIKQIVEHSGLFLGDN 228 YL+ +IL+ L R Q+ E+ + VE +G++ Sbjct: 176 YLNDIILSTTVLISRGQVAKHLTPITASSLSRLLLDLDKYPVVYELLESVEQAGIYKFSK 235 Query: 229 AVR---TLTGLIEKQHQQAQVISA-----DNVQGLLQRVPGIASLNI-IDAQLVENITGH 279 + L Q + + L++ V +LN+ D QL +++ H Sbjct: 236 DELRYLSYVVLGNGLRFFMQDGTIPIPFERKIHALIETVSEKINLNLTKDVQLEGDLSLH 295 Query: 280 LLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYF 337 L + + ++++K +P+ F + + + + + + D + + ++F Sbjct: 296 LYQMVLRLQADTTVINPLLSDIKKNYPSLFGIVWYALVDFATENHLTISDDEISFVTIHF 355 Query: 338 ACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLL 397 A+ER + R+ + + + + + + + + + +I S + ++ ++ + L Sbjct: 356 QAAIERSKKRRRILFVCLNGIGTSALLSAQMRQILPDVSLIQIVS-RDALSQQDLSDVAL 414 Query: 398 IINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE---------RFFSAP 448 II+ T+ ++TA +++I + + Q+P + Sbjct: 415 IISTIPLPKQ--SVPIATISPMLTADDMKKIMNKYIDVVMAQKPSLPAVCNPSMNKVLSI 472 Query: 449 GSFHYSNVRGESWQHITRQICAQLVAQHH-ITADEAQRIIAREGEGENLIVNRLAIPHCW 507 H E+ Q + + Q A + + RE + N AIPH Sbjct: 473 LRKHVYFSTVENQQEAVDYLLSTTPWQSVEAQASYKRSVFRREELQTTYLGNGFAIPHGD 532 Query: 508 SEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIA 567 + +P++ N + V++ + D + ++ L + I+ Sbjct: 533 PSLLETSHVSVLFPEKPIKWGNNKADVVIMLMVSMDDKQSMEPIMDLIMQGINNKDWFIS 592 Query: 568 GLTG 571 +T Sbjct: 593 KMTE 596 >UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli RepID=C2BXN0_LISGR Length = 646 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 97/643 (15%), Positives = 206/643 (32%), Gaps = 69/643 (10%) Query: 1 MLNERQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTL--NGKARIFASGSA 57 +L + ++++ L + T ELAQ VS +T + + L +L + I Sbjct: 4 ILEYKYIEVLKYLIEHRHTTYNELAQYLNVSTKTASKYVRILQESLAEEEEVAIHVKPRF 63 Query: 58 GYQLEIFERRSFFQLLQKHDNDDRLL---------ALLLLNTFTPRAQLASALNLPETWV 108 G ++ E LL + + LL LA L + + Sbjct: 64 GIEMVGTEEAWLSILLSMQRPKNDSIQDRITHVYSRLLNTKGHLKIQDLADELFVSRATM 123 Query: 109 AERLPRLKQRYER--TCCLASRPGLGHFIDETEEKRVIL-----------LANLLRKDPF 155 + +++R E+ +++R GL E KR + A L K Sbjct: 124 ENTIKEIRKRLEKEGVAIVSNRNGLKIDATEK-MKRHFMSDVISYYWGGVTATNLFKKEE 182 Query: 156 LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILA---IYALRNQLTDEWPQYPGD 212 L + D + + L +SL + +L L + + Sbjct: 183 LELGINMIGDTTNIIDVNLLHSITNVLNIFIESTSLQVTEYEYQSLSIHLAIAIERIKKN 242 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS------------------------ 248 I + + TL + ++ Q Q+ Sbjct: 243 --FYIDKKIAPANAPSKYATLLIELLEEKFQIQLPDYEREYIDIHILAIEKSSLNDTDGE 300 Query: 249 ----ADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAA 304 D+ + L Q + D +L+ ++ HL + +K Sbjct: 301 MLQVLDDSEKLQQIIRSTLGGYSPDEELINSLLVHLNAAVKRLKLEVSIHNPYTEEIKGN 360 Query: 305 WPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH-QNERQPIILLSDQNAIA 361 + AF +S+ + + I L + + I L+ L+R Q +R+ I++ S + Sbjct: 361 FSGAFAISIELASAIEAGFAIKLNEDEIAFITLHIQSFLDREAQTKREVILVCSSGYGTS 420 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + + I R + + + L + I+ LII+ ++ + + + V ++T Sbjct: 421 KLLEQRI-RQTFGAALHVKQVLGIRDLQKANIQDELIISTIP--IEKSNSPILVVSPLMT 477 Query: 422 AAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRG-ESWQHITRQICAQLVAQHHITA 480 A I++I FL +F + G E + +I + L+ ++ Sbjct: 478 NADIQKINTFLTKHTTSSSDVFLKLLKKTFVCISTAGPEKRNAVLEKITSTLLTHGYVHE 537 Query: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 + + RE + A+PH + ++ N + + V Sbjct: 538 GIYEGSLKREKLASTAMG-MFAMPHAEITYVNKPSISMYVNENGIDWNGDTVQVVFFFAL 596 Query: 541 AADARHEL-KIFSYLASILCQH-PAEIIAGLTGYEAFMELLHK 581 + + +I++Y ++ H + + Y +L + Sbjct: 597 NQAVKESINQIYAYFNEVISNHKVMKKLPHCKTYSEITNVLKE 639 >UniRef50_A6VLW1 Transcriptional antiterminator, BglG n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VLW1_ACTSZ Length = 608 Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 91/598 (15%), Positives = 200/598 (33%), Gaps = 46/598 (7%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYL-NFTLNGK---------A 49 L++RQ K+ LL+ Q T ++AQ GVS R++ D+ L +F L Sbjct: 3 LSKRQTKLFQLLDHQADYCTINQIAQHLGVSKRSVHYDLAKLHDFFLQQGKELKTKPSVG 62 Query: 50 RIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 + + + + S + + L LL + +LA + ++ + Sbjct: 63 VKIVTTAKKNEHKANNFTSSRLTVDARRVE-ILAQLLFEERIVTQTELAERYFVSKSSIQ 121 Query: 110 ERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRK-DPFLIPLAGITRDNLQ 168 L + Q++ + +K + + L A Sbjct: 122 NDLRSINQQFIE-LKTDHDGTYIATTEVNWQKALFKFNQYISSSYAELSDKARALNTYYP 180 Query: 169 H--LSTACDNQHRWPLMQGDYLSSL-------ILAIYALRNQLTDEWPQYPGDEIKQIVE 219 + R+ L G LS IL I R Q + +P+ ++ + Sbjct: 181 QEIIDFVNKLISRYILKTGIKLSDFYIQNIMHILIILVYRIQKGNHFPERSNNDALPNIA 240 Query: 220 HSGLFLGDNAVRTLTGLIEKQHQQAQVI--------------SADNVQGLLQRVPGIASL 265 + + ++ H + V L+ V + ++ Sbjct: 241 LEKMINNIESEFSIRFNQGDMHFLRHHFFLNRLDEINENAINCENIVHQLIAEVEHLTNI 300 Query: 266 NII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD 324 D QL + + H+ ++ + +K+ ++++ L + + Q Sbjct: 301 PFTTDEQLYKQLLLHVPSMISRLQDVNYMENPYTQEIKSELSRSYNILLIAVQKIETQFH 360 Query: 325 IPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARS 382 I + + + LYF A ER + R+ +++ A + + I+R V ++ + S Sbjct: 361 IKFNEDEVIFLSLYFQVAQERLRKNRKILVVCPMGTAASELVINRIKRFVAGQDILESAS 420 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLA-TAFIRQQP 441 L+EL + L++ L D + + I I+ + + RQ Sbjct: 421 LTELQHLDLTQFDLILSTVE---LADIKQKWFKISLFINEKDIKMLLNIERDENNYRQIS 477 Query: 442 ERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRL 501 + +H + + + L ++ + Q ++ RE + + Sbjct: 478 SNAVFSSDIYHEIQGNYSDKVTLLQDVIDGLTVKNRVKNGYLQSVLEREKLSPTDLPMGI 537 Query: 502 AIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV-LIACAAADARHELKIFSYLASIL 558 AIPH S+ + + + ++ +N ++ + +I A D I S + S++ Sbjct: 538 AIPHGISDLVNKTTVVIVKNKRKIKWDNYTVDIIFMINIAPQDRYQTKNIISEIYSVI 595 >UniRef50_C4VSP6 Putative transcriptional antiterminator n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VSP6_9LACO Length = 609 Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 104/612 (16%), Positives = 231/612 (37%), Gaps = 40/612 (6%) Query: 3 NERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 NE L I+ T L+ Q G++ RT+ I L + S GYQ Sbjct: 4 NEDILLILQKNSSSWITAKMLSVQLGITERTVKNKIKK----LRAQGVSIKSSVNGYQYR 59 Query: 63 IFERRSFFQLLQK--HDNDDRLLALLL-LNTFTPRAQLASALNLPETWVAERLPRLKQRY 119 LL + LL LL L+ L + E + + + L+ Sbjct: 60 GENTNQKKLLLPQTYSQRKSWLLRYLLQTKDDVNIYDLSQKLYINEVELRKEIQNLETEL 119 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKD--PFLIPLAGITRDNLQHLSTACDNQ 177 S+ G + + +E+ + LL+ L+ ++ L+ + +DN + + NQ Sbjct: 120 SDFDLTLSKMGDNYKVLGSEQNKRKLLSALIYQELKGTLLTKK-VIQDNFKLIKVDAVNQ 178 Query: 178 HRWPLMQGDYLS-------SLILAIYALRNQLTDE------WPQYPGDEIKQIVEHSGLF 224 L++ L +L+L I + ++ ++ + +K I + + Sbjct: 179 MLVLLLEKYELKIDDFDFNNLLLHIVIMIDRGSNNLKSVYSNLKIVNQIVKWIKSNENID 238 Query: 225 LGDNAVRTL--TGLIEKQHQQAQVISADNVQGLLQR----VPGIASLNIIDAQLVENITG 278 L N V L L+ D +Q L Q V +LN+ + + Sbjct: 239 LSSNDVHQLEEMFLLLSDKGVELKKDDDKIQELFQEIVGFVRRTYNLNLNERLFKKRFLP 298 Query: 279 HLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLY 336 HL+R + A MNN+K + P ++ + + + I + + + I L+ Sbjct: 299 HLIRLIERCKNNATIHNPLMNNIKQSSPTIYECACLIAYAIHKSYGIEISEEEIAFIALH 358 Query: 337 FACAL-ERHQNERQPIILLSDQNAIATINQLAIERDV-LNCRVIIARSLSELVAIREEIE 394 ++ E+ QNE + I + N + +L + + + +I+ ++S++ I + + Sbjct: 359 VGNSVAEQIQNENKIICQMYMSNYHDNVQRLLNQINARFSNDLILLDAVSDVNDIMSQTQ 418 Query: 395 PLLIINNSHYLLDDAVNNYITV---KNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSF 451 ++++++ ++ + ++ + A + + F+ P +F Sbjct: 419 LVIVVDSEQQFVNFNTTYISSFFLSNDVTKLQRAIREMKLEIRAKRLKIGLKVFTTPDTF 478 Query: 452 HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQE 511 + N + ++++ + ++ ++V + + + +++ RE +AIPH Sbjct: 479 YIDNKK-KNYKQVISELSNKMVREGIVGPEFECKLLERENISSTAFG-LVAIPHAIDYDA 536 Query: 512 RRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL-KIFSYLASILC-QHPAEIIAGL 569 + + F + V+ N+ I V + + E K+F L++I+ + Sbjct: 537 KSSKWFIYINPKGVDWLNQRIYLVFVLAYNSRNDDEFRKVFDELSTIVIDDEKVVKLINS 596 Query: 570 TGYEAFMELLHK 581 Y+ F+E + K Sbjct: 597 RSYDDFIERITK 608 >UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Listeria RepID=Q723N6_LISMF Length = 653 Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 88/652 (13%), Positives = 214/652 (32%), Gaps = 79/652 (12%) Query: 1 MLNERQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-G 58 M+ R+ I+ L + +T G +A G+S +T+ + ++ L G Sbjct: 7 MIANREKNIIQFLMKTGQTRVGTIANHLGLSEKTVSNSLKEIDVFLKDFDMTVVRKPKIG 66 Query: 59 YQLEIFERR--SFFQLLQK------HDNDDRLL----ALLLLNTFTPRAQLASALNLPET 106 +E + + L ++R++ LL + + QLA L + + Sbjct: 67 VYIEGDNKAFAEVSRFLDNQVSPIPSTKEERVIYIFSKLLKADDYITIHQLADELYISRS 126 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLL--------------- 150 + + + + + E+ L +P G + +E ++ L + + Sbjct: 127 TIEKNMVEVTKMLEKEGITLYKKPSKGMKLLISEREKRALTSKFINNFWGNNWYLKQEGE 186 Query: 151 ----------------RKDPFLIPLAGITR----------------DNLQHLSTACDNQH 178 + L + I + + HL+ A + Sbjct: 187 KVLQAFDTIKADVTGIFPEEGLKEIIAIVQAFSERHDFAFTDYAFQSIVIHLAIAV-ERI 245 Query: 179 RWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIE 238 R + S + ++ + E ++ I + + + Sbjct: 246 RAGEYIENVESDPMKDVFD-SQRNNTEILVSMLEDRLDIKIPAFEVGYIQ-LHLTAAYNQ 303 Query: 239 KQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSM 298 + + + + + V + D L++++T H+ + + + Sbjct: 304 QHDELLVSVRPKE-DDVAEFVSTCLAEGNYDKSLLDDLTTHMKSAINRLKLGMHFKNPYL 362 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSD 356 + +K +P AF+ +L+F ++ D+ + + + I L+F ER ++ I ++ Sbjct: 363 SKIKQNFPQAFEEALYFKAKFEQKYDVQVNEDETAYIALHFEAYKERSRSFPDQIRVVLV 422 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIRE-EIEPLLIINNSHYLLDDAVNNYIT 415 + ++L R +I + + A+ E E++ L+I+ + L+D I Sbjct: 423 CSTGLGSSRLLAARIKKYFPMITIEKILSVQALMETEVDVDLVISTIYLELED--IPSIV 480 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERF----FSAPGSFHYSNVRGESWQHITRQICAQ 471 V +++ A ++Q++ + +++ P + ++ + + + QI + Sbjct: 481 VSPMMSKADLQQVESQIERTRRKKKKRSQPFVDLIEPKT-IFAKLDVATMEDAITQIGNK 539 Query: 472 LVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV 531 LV + + + RE +A PH TL PV+ Sbjct: 540 LVNLGIAKSGIVESALKREALSFTSF-EEMATPHADPALINESHIAIATLKNPVKWGLVE 598 Query: 532 INHVLIACAAADARHELK-IFSYLASILCQHP-AEIIAGLTGYEAFMELLHK 581 ++ + L ++ + E + L E L K Sbjct: 599 VDKIFFIALTEQNGINLDAMYEQFYKYIDNKKWLEKLTQLKSAAEIYEHLLK 650 >UniRef50_A6LWY3 Transcriptional antiterminator, BglG n=2 Tax=Firmicutes RepID=A6LWY3_CLOB8 Length = 635 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 87/608 (14%), Positives = 212/608 (34%), Gaps = 60/608 (9%) Query: 28 GVSGRTILRDIDYLNFTLNGKAR-IFASGSAGYQLEIFERRSFFQLLQKHDND------- 79 VS RTI DI YL K I GY LE+ + F + L+ D + Sbjct: 27 KVSKRTIQSDISYLMRISTSKGFEIHTKRGVGYLLEVKDDELFEKFLKTLDENIVFKIKE 86 Query: 80 --DRLLALL-LLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLAS--RPGLGHF 134 ++LA L + N + ++A + +T + + + + + LA + G Sbjct: 87 RPSQILAFLSVQNEYISMDKVADTFQVSKTLIKHDIKEV-EELAKGYHLALEKKSHHGIR 145 Query: 135 I--DETEEKRVI-----------------LLANLLRKDPFLIPLAGITRDNLQHLSTACD 175 I + K+ + ++ + + LI + N+ + + + Sbjct: 146 IVSSDRNLKKYLCQEYQTKNVFVRMAVDGVVIDFSHVESQLIRQMNKEKLNINY-NELLN 204 Query: 176 NQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTG 235 M L + ++ + I + + + ++V L Sbjct: 205 MIVYLKSMVYISLKGNKQPVQDYEFHESNPIEKIVESLIHTMEKKYKVCFDKDSVEELIE 264 Query: 236 LIEKQHQQAQVISA------DNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPV 288 +++K + + D+++ L++ + D L + H+ + Sbjct: 265 VMQKNIHRKDTYVSFTDNLTDDIEVFLKKTDETYDTHFFEDQDLKRLLLSHISLLVDRLH 324 Query: 289 WIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER--- 343 ++ + N L +P F++++ F +L E+ ++ + + ++FA + + Sbjct: 325 NKISYKNALANELSITYPMIFNIAIQFCDILHEKYNVEFTFDEIGFVAMHFAAHMVKEKQ 384 Query: 344 --HQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINN 401 Q+ + ++ S A + ++ +E V L + I + + + + Sbjct: 385 LKLQSYNKICVICSSGGGSAYMIKMQLESVFPKSEVKTFSFLQQDEMISYKPDIIFTVIP 444 Query: 402 SHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT------AFIRQQPERFFSAPGSFHYSN 455 Y + I +K ++ + +I+ L I + P + F ++ Sbjct: 445 ISYDAHIPI---IYIKELLDDKDLYRIRQILECDDYDPYTLINENPIYYSYFSKEF-FNI 500 Query: 456 VRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFR 515 ++++H+ R++ L + + A ++ RE + +N + IPH R Sbjct: 501 TEEDNYEHLIRKMAEDLEKKGYGKEGYADLVMEREAFISTIYLNGVCIPHPIETDALRNV 560 Query: 516 GFFITLAQPVEVNNEVINHVLIACAAADARHELK-IFSYLASILCQ-HPAEIIAGLTGYE 573 L +P + + + + C + K I L ++ + E + + +E Sbjct: 561 ISVSILKKPFIWLEKEVRIIFMICLKKEQVEVYKDITKKLYQLMREPKYLERVIRVKSFE 620 Query: 574 AFMELLHK 581 M ++ + Sbjct: 621 ELMAVMKE 628 >UniRef50_A5KJK5 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJK5_9FIRM Length = 626 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 95/600 (15%), Positives = 213/600 (35%), Gaps = 51/600 (8%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLN-FTLNGKARIFASGSA 57 + E+ ++++ L + EL + G+S RT++R + L +L I Sbjct: 1 MQEKYKQLLEALLESSKEFLNSQELGELAGISQRTVIRYMKELKEQSLKYGFFIHTVKGR 60 Query: 58 GYQLEIFERRSFFQLL--QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 GY+LEI E F L ++ ++L L LA L+ + ++ + ++ Sbjct: 61 GYRLEIIEEEKFRDALAVEEDVEVTKVLFKLFFERTCKLDDLAELLHYSRSGMSRIIEKV 120 Query: 116 KQRYER-TCCLASRPGLGHFI--DETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLST 172 +++ ER L ++P +G FI E + + + + + R+ L + + Sbjct: 121 EKKLEREGLRLLNKPYVGFFIGGSEVYIRNYLYKLLKKKSLEETEKIFRVPREMLAKVRS 180 Query: 173 ACDNQ------HRWPLMQGDYLSSLILAIYALR--NQLTDEWPQYPGDE----------- 213 D + H+ + +L L++ + + ++ Sbjct: 181 EIDAELAQKSVHKRKENELFFLKYLLIQKQRIAIGKTIKTDYFANISQTVHLNHDMEVVR 240 Query: 214 -IKQIVEHSGLFLGDNAVRTL------------TGLIEKQHQQAQVISADNVQGLLQRVP 260 I++ +E S D + + G ++ +++ D + QR+ Sbjct: 241 NIQKRIETSVCPKSDEEIENIYLALVYRQAFWQNGYVDSINEKNLQFYQDMTERAFQRIK 300 Query: 261 GIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 +++ D LV + HL + + E N++ ++P A+ ++ + Sbjct: 301 NDYKVDLFQDDILVNGLVLHLASNFSRYLLGMETENLFYNDVLESYPTAYYYAMEVAEEI 360 Query: 320 R--EQLDIPLFDSDLIGLYFACALER--HQNERQPIILLSDQNAIATINQLAIERDVLNC 375 +L + ++ +G++FA LER + + I+ A + + + + Sbjct: 361 SVWTKLSLSKYEISFLGMHFASYLERSLKSKKWKCAIIYGSGIGSAKLLESRLHNKYPHL 420 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 VI L E EE + + + ++ + ++ ++ + Sbjct: 421 EVIGTGLLEEAGKKAEEADFFITTFPVEEP-EIMGKPWVRLSPMLDIKEQIALEQLV-GN 478 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 R + R+ S + Y + + +C + IT EA+ I+ RE Sbjct: 479 LARHRKWRYESVSKMYLYIDQ-YMEKIELLNYLCDLCREKRFITEQEAEGIVGRENLVST 537 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLA 555 IV +A+PH E F L +P+ + V++ C + Y+ Sbjct: 538 EIVEGIAMPHGLIEGS--SFLVFALLKEPIIWGRTSVKLVVMGCFQRGDERMKEELEYIF 595 >UniRef50_C7HSJ2 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSJ2_9FIRM Length = 630 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 101/602 (16%), Positives = 223/602 (37%), Gaps = 75/602 (12%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + RQ KI+ +L + T E+A+ VS RT+L +++ +N L+ R+ + G Sbjct: 3 ITNRQKKIIGILLESKDTITCQEIAEIINVSDRTVLNEVNSINKKLSDGNRLTVAKGKGI 62 Query: 60 QL----EIFERRSFFQLLQKHDNDDRLLAL----LLLNTFTPRA----QLASALNLPETW 107 +L I+E +L D ++ L+ LL+N + + L + + Sbjct: 63 KLNRNTTIYE---LHKLYNSEDENEILIKRFINTLLINNYFKQKKYSIDFIEELYISQNT 119 Query: 108 VAERL---PRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLL---RKDPFLIPLAG 161 + + + + +RY+ + ++ G+ E R+ + L + + Sbjct: 120 LKKLIRDTREVLKRYQIDLIVNNKEGIFIKGRENNI-RLCMSNILFSSSSDYEYFLDSIN 178 Query: 162 ITR----DNLQHLSTACDNQHRWPLMQGDYLSSLI-LAIYALRNQLTDEW---------- 206 + D ++ L+ N++ L + S +I + I +RNQ + Sbjct: 179 LFNIKEIDEIKRLTLKILNKYDLSLTGVAFNSFVIHILISIIRNQNEINYDKDLLKTMDK 238 Query: 207 ---PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ-------QAQVISADNVQGLL 256 + +K I E L + LI Q +A ++ Sbjct: 239 SVEKDIVRELMKTIKEKLNYDLSSDYYYLTKHLITSQKFSKDDDKLEADEFVNIIYNNII 298 Query: 257 QRVPGIASLNIIDAQLVEN-ITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 R+ S++ + +++ + HL + + + ++ +K+ +P A+DM + Sbjct: 299 NRIKRDFSIDFSNDEILTGSLKIHLTTSINRYMLNSSINHIDLSEIKSQYPIAYDMGIVA 358 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVL 373 + + + D++ + L+ A R N+ + + + I + + Sbjct: 359 AEEIHSVIKRDIDDTEILFLALHLGTAFNRVNNDGK--------ESGSNIL-IVCGAGLS 409 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYI---TVKNIITAAGIEQIKH 430 R + S L +EI+ + II++S Y D N + ++ N+I G ++ + Sbjct: 410 TARFL---KYSLLEKFDKEIKNIDIISSSQYKDDMFDNYDLVLSSINNLINIEGSIKVNY 466 Query: 431 FLATAFIRQQPERFFSAPG--SFHYSNVRG------ESWQHITRQICAQLVAQHHITADE 482 L + + A N ES + + + L ++ + + Sbjct: 467 ILNNIEVNIVKNKLRYAKNLEHLKVFNNELFYKKSFESKKEVLDYLTTDLSNKNILNKKQ 526 Query: 483 AQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAA 542 + I RE G + NR+AIPH S + + + + ++ +NE + V++ Sbjct: 527 IESIYDREKMGNTCLGNRIAIPHPLSYTAKEMKISVLINDKAIDWDNEEVFVVMLLLIPK 586 Query: 543 DA 544 D Sbjct: 587 DK 588 >UniRef50_Q3CZS6 MW0309, putative n=3 Tax=Streptococcus agalactiae RepID=Q3CZS6_STRAG Length = 629 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 95/640 (14%), Positives = 214/640 (33%), Gaps = 70/640 (10%) Query: 1 MLNERQLKIVDLLE-QQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML RQ+K++ +LE +Q P G+ A++ G+S RTI +I L + +I + G Sbjct: 1 MLTSRQVKLLKILESEQSYQPIGKFAKELGISDRTIYSEIKLL---IEEGYQINSKRGKG 57 Query: 59 YQLEIFERRSFFQLLQKHDNDDR------LLALLLLNTFTPRAQLASALNLPETWVAERL 112 +L +L + + +LL + L+ + +T + L Sbjct: 58 IKLVNQRGFDDRPILNISTDPAETRRIEIMKSLLFDHATVTLKGLSDHYFVSQTSIKNDL 117 Query: 113 PRLKQR-YERTCCLASRPGLGHFIDETEE-KRVILLANLLRKDPFLIPLAG--ITRDNLQ 168 ++ ++ + G I++ +++++L N + G I D + Sbjct: 118 KFIEGTLFQNNLSFLNSNKSGTKIEKMPLDQKILVLFNFNQYIMTFKANLGNDIFEDRID 177 Query: 169 HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDN 228 L+ ++ +L + N +T I+ S L G++ Sbjct: 178 SLTEYYSSEVISVCK-------NVLYTFIRSNVMTILDTYIESLLNIYIIFVSQLLTGNH 230 Query: 229 AVRTLTGLIEKQHQQ-----------------------------------------AQVI 247 +T+ L +K H Q Sbjct: 231 FEKTINPLDKKHHAFYVSTAVTLLHKASLRLGFEYTNSDIEYLSQMLLNYRFEPIPVQQN 290 Query: 248 SADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 V LL+ V S+N + D L + ++ H+ L + + + +K + Sbjct: 291 DDKFVTALLEDVSKAMSINFLEDQYLFDQLSQHIPAMLYRLKYHTHIQNPFTDKIKLEFA 350 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATIN 364 +++ + L ++LD+ + + + +YF ++E+ R+ +I+ + + Sbjct: 351 ITYNVLWLVLQDLGQELDVVFNEDEVAYLTIYFQLSIEKIGKSRKILIVCQTGIVTSELL 410 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 I++ V + + SLSE+ ++ L + Sbjct: 411 INRIKKVVPSLDQVEIASLSEMYEKDLTCYDFVLTTIETNLDLPNLYYVSPFIKNEEITQ 470 Query: 425 IEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ 484 + + I + + A N ++ + + + LV ++ + Sbjct: 471 LLTGNPYSNNVTIGK--KDQIEANYYIPMLNQDFKTKEELLNSVGQNLVEMGYVQKEFVA 528 Query: 485 RIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA 544 ++ RE G +A+PH E + FI ++ +++ V + + D Sbjct: 529 SLLDREKMGSTEFPLGVALPHGRPEFVLKTVVVFIQNTHKIKWKESLVDTVFLIALSRDD 588 Query: 545 RHELK--IFSYLASILCQHPAEIIAGLTGYEAFMELLHKG 582 +K I +I + + T +LL++ Sbjct: 589 IKNVKDIILKINKTISNEEVLRQLKSETRELEVYKLLNQA 628 >UniRef50_C2KEC2 Transcriptional antiterminator n=1 Tax=Lactobacillus crispatus JV-V01 RepID=C2KEC2_9LACO Length = 594 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 88/603 (14%), Positives = 221/603 (36%), Gaps = 50/603 (8%) Query: 18 RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQ----LL 73 T L+ Q GV+ RTI I L S S GY+ E ++ SF Q +L Sbjct: 1 MTAKMLSMQLGVTERTIKNKIKS----LREAGIKIKSSSQGYRYE-GDKASFEQNSTIIL 55 Query: 74 QKHDNDDR---LLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPG 130 + + + L LL ++ L+ L + E + + + L+ +R G Sbjct: 56 PQTYSQRKVWLLRHLLQADSSVNIYDLSETLYINEVELRKEIQNLEVELSDFSLTLNRMG 115 Query: 131 LGHFIDETEEKRVILLANLLRKD---PFLIPLAGITRDNLQHLSTACDNQHRWPLM---- 183 + + TE + LL+ L+ ++ L + + +++ Sbjct: 116 DNYEVIGTERNKRKLLSALIYRELKGTLLTEKIIQNNFKTIDVRSVKKALNKYLEKNNFK 175 Query: 184 QGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQ 243 D+ + +L + ++ ++ + + V + + + Sbjct: 176 IDDFDFNNLLLHTIIMIDRGNDNLSITTSNLEIVNDIVNWIKNKQKVVLSNSDVRQLEEM 235 Query: 244 AQVIS------------ADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIA 291 ++S D + ++ V +LN+ + + HL+R + + Sbjct: 236 FLLLSNQKIELKDDDKIEDLFRKIVGFVRRTYNLNLDEKLFKKRFLPHLIRLIERYKSSS 295 Query: 292 EHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACAL-ERHQNER 348 MNN+K + P ++ + + E I + + + I L+ ++ E+ Q E Sbjct: 296 SIHNPLMNNIKQSSPTIYECACLIAYAINEAYGIEINEEEIAFIALHVGNSVAEQIQKEN 355 Query: 349 QPI--ILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLL 406 + I + +SD + I N +++ ++S++ I + + +++++++ Sbjct: 356 KIICQLFMSDYHGNVQRLVSQINSSFGN-DLLLLDTVSDVNEILRQTQLIIVVDSNQQF- 413 Query: 407 DDAVNNYITVKNIITAAGIEQIKHFLAT------AFIRQQPERFFSAPGSFHYSNVRGES 460 N + V + + + +++ + + + + F++ +F+ N + ++ Sbjct: 414 --PQFNTVYVSSFFLSNDVTKLQKVIREIKLVLRSQRLRIGLKQFTSENNFYIDN-KHKN 470 Query: 461 WQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFIT 520 ++ + ++ ++ + D +++ RE +AIPH + + F Sbjct: 471 YKAVIAELSTKMSKSGIVGKDFENKLLEREKISSTAFG-LVAIPHAIDYDSKFSQWFIYI 529 Query: 521 LAQPVEVNNEVINHVLIACAAADARHEL-KIFSYLASILC-QHPAEIIAGLTGYEAFMEL 578 + V+ + I V + ++ E K+F L++I+ + Y F+ Sbjct: 530 NPKGVDWLGQKIYLVFVLAYSSKDDDEFRKVFDDLSTIVIDDKRVADLINSKNYNDFVNR 589 Query: 579 LHK 581 + K Sbjct: 590 ITK 592 >UniRef50_C2BFG8 Transcriptional antiterminator n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFG8_9FIRM Length = 596 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 100/608 (16%), Positives = 233/608 (38%), Gaps = 46/608 (7%) Query: 1 MLNERQLKIVD-LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ML +R+++I+D L+ + +L+ + VS RTILRD+ ++ L S GY Sbjct: 1 MLGDREIEILDVLINAEDVKSNDLSTKFNVSNRTILRDLRKISNFLEKYGDKINSSKDGY 60 Query: 60 QLEIFERRSFFQLL------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLP 113 +L ++ ++ Q +D +L ++ + + LA L E+ + ++L Sbjct: 61 KLISTDKNKLKSIIRIIKLKQYNDIYKQLFLFIVEHDNIKVSDLALKFYLSESSIKQKLN 120 Query: 114 RLKQRYERTCCLASRPGLGHFID--ETEEKRVILLANLLRKD----PFLIPLAG-ITRDN 166 LK++ ++ +ID E + + ++ ++ K+ L+ L+G + D Sbjct: 121 MLKKKIDKYNIKLLMVSGKIYIDGLEKDIRNYLVDNYMVVKNNILYHTLLELSGIPSIDI 180 Query: 167 LQHLSTACDNQHRWPLMQGDY--LSSLILAIYALRNQ------------LTDEWPQYPGD 212 ++ L + + DY L SLIL Y + D + + Sbjct: 181 IKKLISKELIDRSITISDYDYSKLISLILVSYYRAEYSIYLSQSYINPIILDINKKLAIE 240 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQL 272 Q+ + ++ +N++ + ++ +++ + + + + I S D + Sbjct: 241 HKIQLSKKDCAYITENSIFNKYMYDDLDYKINKIVD-EALSKICKTSSNIYS---FDDEF 296 Query: 273 VENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD- 331 ++ I HL + + + +N +K + + ++ ++ E +I + + + Sbjct: 297 IKAINFHLKILIHRMELNDKIKNPLVNEIKRKFILEMNDAMIIKDMIYEHFNIQIDEDEV 356 Query: 332 -LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIR 390 + +Y + ++++ II+ + ++ I ++ IE+ N +I LS L Sbjct: 357 SYLAIYLMSSKISSKDKKNVIIICNFGIGVSQIVKMKIEQQYKNLNIIGVYPLSNL---- 412 Query: 391 EEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS 450 L I+ + + VN + K I G + I F + + + Sbjct: 413 -----DLAISKNPDYIISTVNIDVDTKGIPVVDGTKVIYSNEPLVFAERSIKDILNKNLF 467 Query: 451 FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQ 510 F E + ++++++ L +T + + + I N +AIPH E Sbjct: 468 FDIDVASKEEFFNVSQKLI--LKNNSEMTDKKLDVVENYDYSVSTDIGNLVAIPHAVLEG 525 Query: 511 ERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPA-EIIAGL 569 + + L + N E + V + + + YL + + + Sbjct: 526 DFKSFVAIFRLKNQIIWNKENVKFVFLIVINKKEKFYIDELKYLYNYILDPSNLSFMINA 585 Query: 570 TGYEAFME 577 + Y+ F+E Sbjct: 586 SNYDEFVE 593 >UniRef50_C8ZX11 Predicted protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZX11_ENTGA Length = 661 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 86/598 (14%), Positives = 207/598 (34%), Gaps = 57/598 (9%) Query: 8 KIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ-LEIFE 65 +I+ L++ P T ++A+ G S ++I R I ++ L G L + Sbjct: 12 EILRFLQKNPETSIKKIAEYVGKSEKSIRRKIAQIDDLLVENKLGRIDTKPGRGILFVLY 71 Query: 66 RRSFFQLLQ-----------KHDNDDRLLALLLL---NTFTPRAQLASALNLPETWVAER 111 QLL+ +++ L+ LLL N F + +LA L + + Sbjct: 72 PNKQNQLLKHFSDFSIPEGISQNDEWTLICLLLERASNHFITQVELAEKLYVSIPTFRKL 131 Query: 112 LPRLKQRYE-RTCCLASRPGLGHFIDETEE-KRVILLANLL--RKDPFLIPLA----GIT 163 + +K+ + + + PG G + E KRV + +L + + L GI+ Sbjct: 132 MSHVKEWFADHHIMIQTIPGKGLTLVGDEYSKRVAIRDAILLQEDEKQTVVLQRFARGIS 191 Query: 164 RDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYAL-RNQLTDEWPQYPGDEIKQIVEHSG 222 + + + ++ + ++ I+ I ++ R + P E + E+S Sbjct: 192 VEEISEIIRKAESDWKIKFSNTSFIKIRIMLILSIGRFSYASDMPTIDDFEREYTNEYSF 251 Query: 223 L-FLGDNAVRTLTGLIEKQHQQAQVISA--------------------------DNVQGL 255 + L + G + ++ + V + Sbjct: 252 VETLYRGLEKRGFGTFNEVDKRILTAEILVSNKLRWKDSAALTNLKNQYDNDLLEFVHTI 311 Query: 256 LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 + + I + D L E +T HL + + ++ +LK + F Sbjct: 312 ISSISEILQQPLTEDKILEEELTNHLRSAIFRMKYGHKNSSELTRDLKKLYGRVFLSVWS 371 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDV 372 L + ++ L + + I LY A+ R+Q++ ++ + + I++++ Sbjct: 372 TSQLFEDYYNVQLTEDEIAYIVLYIEAAILRNQSQVDAYLVTDRGRSQSLFATEYIKKNI 431 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 + I E+ + R+++ L + + ++ + K+++ + Sbjct: 432 PEIKEIHIIREEEIDSTRKDV-LYLTMVPVDSVTAVPISYLPSNKDLVNIRTALSRWGIV 490 Query: 433 ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGE 492 + + N + + + + QL + ++ + + RE + Sbjct: 491 PGSISIFSDASKPLLDPRLIFVNQTYTNKEEVVTFLSNQLESLGFVSPNFYLTVWKREQK 550 Query: 493 GENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHELK 549 I + AIPH + + + L +P+ +E+++ V + E++ Sbjct: 551 TTTCIGHHTAIPHGSMTEVFEPKVAIMVLKEPILWYEDEMVDTVFLLATRMQTPIEIR 608 >UniRef50_A9QSG5 Transcriptional antiterminator, BglG family/Fructose-specific PTS system, component IIA n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSG5_LACLK Length = 648 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 93/594 (15%), Positives = 201/594 (33%), Gaps = 65/594 (10%) Query: 14 EQQPRTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAGYQLEIFERRSFFQL 72 + P T L++ T VSGRT+ DI +N + A +F GY L ++ F Sbjct: 29 QSSPVTLDALSKLTKVSGRTVRSDIKSINELISKQGAEVFLIRKKGYLLSYHNKKIFEDF 88 Query: 73 LQKHD--------NDDR----LLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE 120 D ++ R L L ++F + L S L + + +K Sbjct: 89 WNNKDTGTFLFTSSESRIQYLLRLFLTSDSFITQDFLLSVLFVSTNTLYNDFRTVKHLLA 148 Query: 121 R-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQH- 178 + ++ LG+ ++ E + + L+ ++ L + + L D Q Sbjct: 149 DYQLSIVNKSNLGYRLEGEEIDIRMAINQLIFQE-NLTDFITASNTREKDLCLNIDFQKF 207 Query: 179 ---------RWPLMQGDYLSSLILAIYALRNQLTD--------EWPQYPGDEIKQIVEHS 221 + DY + L + +++K+ + Sbjct: 208 SFFFEKYLNKIVQKDSDYFHKNAFSGILLSFSRIKEKKIINNFDLNPSLKEKVKKAILDF 267 Query: 222 GLFLGDNA----------------VRTLTGLIEKQHQQAQVISADNVQG-----LLQRVP 260 D L+ + + ++ A + L Q Sbjct: 268 LRASEDEFKIVIPEVERRYIIYLLTENFPSLLFDNNNKENMLLAKQIVSDVTFDLFQLTK 327 Query: 261 GIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 +L D L ++ H R L + ++ +K +P F++++ + + Sbjct: 328 SRWTL---DEGLKLSLIDHFNRLLNIHQIKSTRNNPILDVVKNDFPYPFELAISQVQKIE 384 Query: 321 EQLDIPLFDSD--LIGLYFACALERHQNERQPI-ILLSDQNAIATINQLAIERDV-LNCR 376 ++ D+ L + + I LYFA A+E + I ++ +++I + I + Sbjct: 385 KRYDVSLTEDEVSYIALYFASAIENSNDNVLTIAVVCGTGKILSSIIEGRIRKKFPYTFS 444 Query: 377 VIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAF 436 I S E + + + +++ + A N I N + I+ + Sbjct: 445 EIKKLSYLEYEELENKNKYQIVVTTIQNK-NLAQKNVIFFDNSNLNKSFKNIEKRIKEIN 503 Query: 437 IRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENL 496 + R F+ P F +S + + +I L +T D ++ARE + Sbjct: 504 LITISNRHFN-PSHFMVIE-EKKSKETVLEEISNILYKDKSVTIDFFNDLLAREELSSTV 561 Query: 497 IVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV-INHVLIACAAADARHELK 549 I + +A+PH ++ + F + + +E + + + + ++ EL+ Sbjct: 562 INDSIALPHPLNDSVIKSTIFVAVVPRGLEWDENTNVKFIFLLAIKSNEVEELQ 615 >UniRef50_C8NFM1 PRD domain/PTS system IIA domain protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NFM1_9LACT Length = 628 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 94/602 (15%), Positives = 221/602 (36%), Gaps = 47/602 (7%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML++RQ +I+ LLE+ T E+AQ TGVS RT+ ++ + LN +I G Sbjct: 1 MLSKRQSRILSLLEESKRYLTAEEIAQSTGVSKRTVHSELKSMEEDLNSIEKILI-RKRG 59 Query: 59 YQLEIFERRSFFQLLQKHDNDDRLLALLLLN-----TFTPRAQLASALNLPETWVAERLP 113 + I +++ + ++D L +++ N +L+ L + ++ +++ L Sbjct: 60 IGIAIENKKNLESKTFELNSDKSRLQVIMENLLFGEKIISYNRLSELLFVSKSSISKELE 119 Query: 114 RLKQRYERTCCLASRPGLGHFIDETEEKRVIL------LANLLRKDPFLIPLAGITRDNL 167 ++++ +S G DE++ + + + + L + Sbjct: 120 KVQKILGGIDLKSSAKGSYLNGDESQLREAYIRFNHWLFTQCTSNNTYSDWLGKLEEYYS 179 Query: 168 QHLSTACDN------QHRWPLMQGDYLSSLILA--IYALRNQLTDEWPQYPGDEIKQIVE 219 +++ AC + ++ W + Y+ SL+ + + R + P + Sbjct: 180 ENVVAACKDVLISYLKNNWDFVSEVYVQSLLSSLIVQTYRMYCGEFVKCKPSGIESEEAV 239 Query: 220 HSGLFLGDNAVRTLTGLIEKQHQQAQVISAD------------NVQGLLQRVPGIASLNI 267 + L + + IEK++ ++IS V ++ + + L I Sbjct: 240 NRILNEVSDRLNIDFNEIEKEYFAGKLISFRFEPAASKVIEQQLVHQIVLDMCSVLKLTI 299 Query: 268 IDAQLVEN-ITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIP 326 + ++ + H+ L + ++ +K + F + L + Sbjct: 300 NNDCGIKAMLENHMFSMLYRLRNHQKIENPFVDQIKEEYGVVFQTIWIVLQKYESLLSVQ 359 Query: 327 LFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLS 384 D + + +YF +E ++ ++ +++ A + + + + + S Sbjct: 360 FNDEEIAYLTIYFQTFIEENRTIKKLLVVCQLGVATSELIIRKLINYLPATTKVERVSKQ 419 Query: 385 ELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL--ATAFIRQQPE 442 + +++ E LI+ LD A +N I V +T ++ I+ L + + + Sbjct: 420 QFERMKDLEEYSLILTTI--TLDRAKHNTIKVSPYLTKNELQMIREVLDENESSHQNVQK 477 Query: 443 RFFSAPGSFHYSNVRGESWQ-----HITRQICAQLVAQHHITADEAQRIIAREGEGENLI 497 + G + + I L + ++ I+ RE G + Sbjct: 478 GISNRYGGIFNQEIDCVKKEWTSKVEIIEAASNVLFKEGFVSEKFKDGILIRENLGGTDL 537 Query: 498 VNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARH-ELKIFSYLAS 556 +AIPH + + +TL + ++ + ++ V C + R KI + S Sbjct: 538 PIGIAIPHGKPQDVYKTTILPVTLKRKIKWDEFYVDIVFFICICEEDRMKTKKIIQNIYS 597 Query: 557 IL 558 I+ Sbjct: 598 IM 599 >UniRef50_C3RHR0 Predicted protein n=2 Tax=Bacteria RepID=C3RHR0_9MOLU Length = 636 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 86/632 (13%), Positives = 223/632 (35%), Gaps = 58/632 (9%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 L RQ I+ LL++ P + L++ +S RT+ DI +N + S GY Sbjct: 7 LTSRQFLIIRLLQKNTVPLSANTLSRLLDISPRTLRNDIFQINKNIEDFHIS--SSKNGY 64 Query: 60 QLEIFERRSFF-----QLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 QL + + ++ ++ + + +L LL + +L+ + E+ VA + Sbjct: 65 QLTLLSENAHMLINDIKISEQSKSTNIILQYLLNHPSCHLLELSENCYMSESSVARCIKT 124 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLL-----------------RKDPFLI 157 +K + R + +E + L A+L+ +D L Sbjct: 125 IKPLLNKYHLTVERKNDIFSLHGSEYDKRALFAHLIGIEASQPITSLQHFQQYFQDFHLS 184 Query: 158 PLAGITRDNLQHLSTACDNQHRWPLMQGDYLS---------------SLILAIYALRNQL 202 + I L+ + D+ H L+ ++ S L+ + QL Sbjct: 185 EVEAIIDSVLKKYNIRVDDIHYQNLVMNTSITLQRIFVGSDIEPLPFSYSLSNDEIICQL 244 Query: 203 TDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD-----NVQGLLQ 257 + + + +E + + + I +++ + Q++ D ++ +L Sbjct: 245 SKDL-CHNLEEYFNLHFAQTDNEYMQVLCIGSIKINEENYETQILYNDYSFVYKIKEILD 303 Query: 258 RVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 + SL + + + H+ R + NNLK P ++++++F Sbjct: 304 DLVEHFSLQLNYQMSLNHFALHIHRLFFRNHSSLYFQNDFHNNLKNTHPFIYELAVYFAY 363 Query: 318 LLREQLDIPLFDSDL--IGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNC 375 +E +I + +++ + ++ ++ ++ +Q + L + + + +LN Sbjct: 364 KFQESFNITVNINEIGLLAIHLGLMIQSNEENKQYLKALCICPEYNDLRKHFANQFLLNF 423 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 + L ++ ++ I+ + D + + + ++ + I+++ + Sbjct: 424 GDNVQ--LISFISSKKNIQDYHFDFLISTINDYESPDCMVISPLLLSQDIDKLNLKINLL 481 Query: 436 FIRQQPERFFSA-----PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE 490 +++ + + NV + +C+Q++ D + RE Sbjct: 482 KEKKKKDLLKKELSKYIDPKLFFRNVDFTCKKDAILFLCSQMLKHGDAKTDFVDSVFERE 541 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL-K 549 N+ A+PH + + R F+ + + + ++ V++ Sbjct: 542 KISTTSFFNKFAVPHAIHFGDVKTRITFLLNDKAIPWGDTSVHLVMLISINEKDIMTFNT 601 Query: 550 IFSYLAS-ILCQHPAEIIAGLTGYEAFMELLH 580 I+S + +L + + + ++ L Sbjct: 602 IYSSIIDLLLDDESFDEMLKIKTFDELSVYLE 633 >UniRef50_B3W767 PRD-and EIIAMtl/Fru-containing transcription ativator n=7 Tax=Lactobacillus RepID=B3W767_LACCB Length = 597 Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 106/606 (17%), Positives = 198/606 (32%), Gaps = 53/606 (8%) Query: 4 ERQLKIVDLLEQQ-PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 R+ I++ L+ P + LA GVS RT+ D+ LN N I + + GYQL Sbjct: 1 MREQTIINALQTNGPMSAAALAATLGVSRRTLQSDLRQLNED-NTGFIITVTRNVGYQLT 59 Query: 63 IFERRSFFQ----LLQKHDNDDRLLAL-------LLLNTFTPRAQLASALNLPETWVAER 111 I + F L + L L + AQLA + + Sbjct: 60 ITDSAQFAAYQASLQDQAQPAMPAKRLPALMHVLLTTTEYLTVAQLAEHELISSKQLQRD 119 Query: 112 LPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHL 170 L L++ T L + G + + R+ L R H Sbjct: 120 LRELEKLLIGTPLQLERKAHYGIRLQGEWQSRIHAL---------------QQRGLPPHH 164 Query: 171 STACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAV 230 T C Q PL +++ + + + L + A Sbjct: 165 QTLC--QRLMPLGLDPAITAQFAGEVGWSLAVKGQATVPAPTTAAFAGLLADSRLSEEAW 222 Query: 231 RTLTGLIEKQHQQAQV-----ISADNVQGLLQRVPGIASLNIIDA-QLVENITGHLLRCL 284 + LT +H+Q + +Q + + + + + H+L + Sbjct: 223 QFLTVSFAAKHKQLTTRLDHDLLKTKLQAYFTALDTRHKTDFATHPEFLSLMYFHVLALI 282 Query: 285 AAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALE 342 S+ L +P AF+ ++ F L + I + ++ + + LE Sbjct: 283 GRLQKHQSLAGLSLEPLARDYPIAFNWAVQFAQWLTREYQIAVPKTEIGYLTTHLLVPLE 342 Query: 343 R-HQNERQPI----ILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLL 397 + H+ + + +L IAT+ L + R + VI L+EL AI E +EP L Sbjct: 343 QAHEAWSRRLYKIAVLCGTGGGIATLLCLRL-RRIFPEAVIQTFGLNELTAIHE-LEPDL 400 Query: 398 IINNSHYL--LDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSN 455 + + D V + + + ++H L+ A + + Sbjct: 401 LFTVTELTETFDCPVVR---IDELASDLDFANLRHELSMAARSNNTDTLVDLLTPALFFQ 457 Query: 456 VRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFR 515 + H + + +D A+ ++ RE + N +AIPH S + Sbjct: 458 TSQAADYHALLLALTATMTSYCGQSDYAESVMQRENFLATIYDNGIAIPHPLSFNAEKNA 517 Query: 516 GFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYE 573 + L ++ + V + D + + + L Q P E + T + Sbjct: 518 VAVVVLPNGAGGSSRPVKLVWLIALKRDQLPLHRTLTTQLAALMQQPDVIEQLVHQTDFT 577 Query: 574 AFMELL 579 F+ +L Sbjct: 578 RFINIL 583 >UniRef50_A8RAH0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAH0_9FIRM Length = 639 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 95/629 (15%), Positives = 216/629 (34%), Gaps = 59/629 (9%) Query: 2 LNERQLKIVDLL-EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L RQ KIV + Q T EL+ S RTI +I +N I S + GY Sbjct: 19 LTTRQSKIVQEINTHQSLTGKELSILLNCSVRTIQNEIMAIN---RSHKIIE-SSNKGYT 74 Query: 61 LEIFERRSFFQLLQKHDNDDRLLALLL-LNTFTPRAQLASALNLPETWVAERLPRLKQRY 119 L + +Q + D+ L +LL N+ LA L + T + + L + Sbjct: 75 LNTSAYEAIYQSSKYPQKDNEALKILLFSNSSIHIYDLADQLYVSITTLEKHLKTYQDIL 134 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF-----------LIPLAGITRDNLQ 168 + R I+ E + L+ NL+ + +++ Sbjct: 135 KEYSLSIIRNKGYLHIEGNEIYKRQLIKNLIINETQGSFINIESFSPYFDNIELSKTKSF 194 Query: 169 HLSTACDNQHRWPLMQGDYLS-SLILAIYALRN----------QLTDEWPQYPGDE--IK 215 D+ + + + L+ SL +A+Y ++ Q T + +Y ++ Sbjct: 195 LEKIIHDHDYSIDRVYANTLTVSLSVALYRMQTHHYIDSEIIYQCTKDSIEYKIATKILE 254 Query: 216 QIVEHSGLFLGDNAVRTLTGLIEKQ-----------HQQAQVISADNVQGLLQRVPGIAS 264 E L N ++ ++ LI Q N+ +L+ Sbjct: 255 YYKEKYQLTPTKNDIQYISSLIIGQIKPNDTVTNPIDSLLDTDFIQNIHNILKSAFRHYM 314 Query: 265 LNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD 324 L+I + + + + H+ + + ++ +LK+ P ++++++ +++ + Sbjct: 315 LDIDFSDNIYSFSMHVDGLIKRSKAMQPAYNYAVRSLKSDHPFIYEVAVYIANNIKKAYN 374 Query: 325 IPLFDSD--LIGLYFACALER--HQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIA 380 I + DS+ I +Y +E ++ + L + + + + + + + +I Sbjct: 375 IQINDSEIGFICIYIGSLVENAIYRTQIYCFFLCENYHQVKQYLYNKLRKILPDTIQLIQ 434 Query: 381 RSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT-----A 435 + + L+I + + I V +T A I++I ++ Sbjct: 435 GTF----ENLQNQSVDLVITTDNIV--HLPIPVIEVSPFLTLADIDKINKVISNLTGLYT 488 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 ++ F Y + I + ++V + + RE Sbjct: 489 SMKASTLFFEFFQSDLFYICDDFQDKYEILDFLAKEMVHHKIADTNFPDSVKNREQLSST 548 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI--NHVLIACAAADARHELKIFSY 553 + AIPH + + + + + E I ++I+ D + ++++ Sbjct: 549 CFSGKYAIPHAIELNANKTMVSVLISHKGIHWDQENIVNIVLMISVRREDRKRFIELYES 608 Query: 554 LASILCQ-HPAEIIAGLTGYEAFMELLHK 581 + IL + + + ++ F +L + Sbjct: 609 MIQILENPYKLSRLTNVNSFDEFKTILLQ 637 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 100/655 (15%), Positives = 235/655 (35%), Gaps = 97/655 (14%) Query: 2 LNERQLKIVD-LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR---------- 50 L RQL+I+ +L ++ ++ VS RT+ R+I +N + Sbjct: 4 LRGRQLQILRKILSSSNTRMEDIMKEFDVSKRTVYREIASINEFVKNYNSKIVNKTDGLV 63 Query: 51 --IFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 + +L+I S + + L LL LN + + + + Sbjct: 64 IEGNVADIEKLKLDIVGYPS--EFETEERRKMILSELLQLNEPVKLEYFSKKFGVTTSTI 121 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD-- 165 + L L++ E+ L ++PG G +I +E +AN L ++ L + Sbjct: 122 SYDLKELEKWIEKQGLTLITKPGYGVYISGSENSFRKAIANFLYENFDTADLIDFLKTGY 181 Query: 166 ------------------------NLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRN- 200 ++ +Q + +++ YL ++ A++ Sbjct: 182 LAKNNIEKNIDLRLLNLIDYDTVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIKRL 241 Query: 201 ------QLTDEWPQ---------YPGDEIKQIVEHSGLFLGDNAVR--TLTGLIEKQHQQ 243 ++ ++ Q + K + E + + ++ + T+ + K Sbjct: 242 QNGETIEMGEDNLQELKKTNEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAKYRST 301 Query: 244 AQVISADNVQGL----LQRVPGIASLNIIDAQLVE-NITGHLLRCLAAPVWIAEHRQSSM 298 Q + +++ + ++ I ++ + + +E + HL+ + + R + Sbjct: 302 TQNYNDKDIEIIARDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIRNPLL 361 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSD 356 ++K +P F+ S +LR++L++ + + + I ++F ALER + + ++ Sbjct: 362 EDIKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYIAMHFGAALERKKEAAKKYNIMVV 421 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 + +++ + + + ++ I S + + + + S LD + V Sbjct: 422 CASGIGTSRMLMSKLQMFPQINIVDVTSSIKLKDLKGRDDIDLIVSTIPLDIKDKKVVVV 481 Query: 417 KNIITAAGIEQIKHFLATAFIRQ--------------------QPERFFSAPGSFHYSNV 456 ++ +E++K L T FI + +R S Y V Sbjct: 482 NPLLLKEDVEKLKKALNTDFIMEYGIKKEEEENYEKEAFHIANYGKRILELCDSITYMTV 541 Query: 457 RGESWQHITRQICAQLVAQHHITADEAQRI----IAREGEGENLIVN-RLAIPHCWSEQE 511 GE I I L+ ++ I+ ++ ++I + RE G+ ++ N I HC E Sbjct: 542 TGEKSTQIIEYILKNLIDKNLISENQKEQIKERLLKRESLGKIVLPNKGFVIYHCTIENI 601 Query: 512 RRFRGFFITLAQPVEV-----NNEVINHVLIACAAADARHELKIFSYLASILCQH 561 + + V++ + E I + A R +++ L+ L + Sbjct: 602 DFPLVVVGKVIEEVKMKNLVGDYEKIRTAFLMVAPEGDREGIEVLGDLSMSLIER 656 >UniRef50_C4ZB72 PRD/PTS system IIA 2 domain protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZB72_EUBR3 Length = 673 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 99/647 (15%), Positives = 222/647 (34%), Gaps = 87/647 (13%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA 57 ML+E+ L I++ L + T LA TG+S R++ + + + Sbjct: 1 MLSEKGLLIIEKLAEHNNELVTSKALAASTGMSERSVKTYLKEVADFCEQNSM-TLDRKP 59 Query: 58 GYQLE----------IFE-RRSFFQLLQKHDNDDRLLALLLLN-TFTPRAQLASALNLPE 105 G ++ I + + + + + +LL A + LN+ + Sbjct: 60 GKGMKPCFSDAQIGKILDVAGRKSAAVSQKKRQNYISYILLSGWDTYTYALFSEELNVSK 119 Query: 106 TWVAERLPRLKQ-RYERTCCLASRPGLGHFIDETEEKRVILLANLLR-----------KD 153 + + + L + G G + +E + + R D Sbjct: 120 NVIMDDINELDAELLLFGIKVHRTAGYGIYATGSELDIRKAMRHFCRYPISDKQVIKTDD 179 Query: 154 PFLIPLAGITRD---NLQHLSTACDN----QHRWPLMQGDYLSSLILAIYALR------- 199 L A +LS A D + R+ ++ DY ++ A+ Sbjct: 180 HRLSRRAAEVIANNFRSVNLSMAVDMIHHVERRFDIIFTDYTFQMLAEYIAIALFRVDVE 239 Query: 200 NQLTDEWPQYP------------GDEIKQIVEHSG--LFLGDNAVRTLTGLIEKQH---- 241 +L + G E +Q V+ +G + +N + G +E+ H Sbjct: 240 KELKTDELDLSNRICDAASDGDAGTETEQQVQKNGFVMIEHENMAKEAAGFLERHHGISL 299 Query: 242 ------QQAQVISADNVQ---------------GLLQRVPGIASLNIIDAQLV-ENITGH 279 A + S Q ++ + + + N+I+ +L+ E++ Sbjct: 300 SQPEIMYLAMLFSCAEGQNRVVMSCEEALSIEDEMIVYLSNLLAANLIENELLRESMRSF 359 Query: 280 LLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYF 337 L +A + E ++++ ++ + F + + +++ I L Sbjct: 360 LPGSIARTHFGIEIDNPFLSDITQSYASLFTVCFTVSRYYEKYTGAMPSENEIAFIALQV 419 Query: 338 ACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLL 397 AL R+ + +++ + A +I IE V + R++ S + I E L+ Sbjct: 420 GGALHRNPMTVRAVLIGAAGYATGSIIAGKIENRVPDVRIVSILSSDRIEHIDEYDCDLI 479 Query: 398 IINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF---LATAFIRQQPERFFSAPGSFHYS 454 + ++ V +I+A + I++ L T + E F Sbjct: 480 LSTIDTRADIHKDMRFLYVSPLISAQDEKNIRNKCFELMTGQSAEVSEFSQMLSEEFIIF 539 Query: 455 NVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRF 514 + ++ + + ++ C L+ + + ++ A+ ++ RE + +AIPH E R Sbjct: 540 EKKAKNRKDVLKRACQLLINKGIVQSEFARDVLEREKVEATAVGCNIAIPHGKPEHVNRC 599 Query: 515 RGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQH 561 + I L +P+E + + + + D+ + K F + + L Sbjct: 600 QILVIRLDKPIEWGERMADMIFLLAINFDSVNTTKAFFHDFTKLLNE 646 >UniRef50_C0ES87 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES87_9FIRM Length = 634 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 109/632 (17%), Positives = 227/632 (35%), Gaps = 63/632 (9%) Query: 5 RQLKIVDLL-EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI 63 RQ I+ +L + LAQ+ GVS RT+ DI +N L + + L + Sbjct: 9 RQANILSVLRKNSALNIEMLAQRFGVSERTVRNDIKDINRELKNSGLVEINQG-KCSLRV 67 Query: 64 FERRSFFQ----------LLQKHDNDDRLLALLLLNTFTPR--AQLASALNLPETWVAER 111 F+ R F L+ + L+ P +A +N+ + + Sbjct: 68 FDTRDFQNAYARIIETDDLMNSSQKRQEYVFAKLMRAMEPVLTDDIAYEMNIGRSTLISD 127 Query: 112 LPRLKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLL----RKDPFLIPLAGITRD 165 L +L+Q E+ + + G + +E R ++ NL + P + G R+ Sbjct: 128 LKKLRQTMEKYELEIVGKTSKGLALGGSELNIRKFVMENLFGSIYQNYPQDELMLGKIRE 187 Query: 166 NLQHLSTACDNQ-----------------HRWPLMQGDYLSSLILAIYALRNQLTDEWPQ 208 + + Q H M Y + + ++ ++L D+ + Sbjct: 188 AMAEKNFEESTQKMFENYMTLMFDRFLTGHVITRMPEKYYNLVSRNSFSFVDELIDDISK 247 Query: 209 YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII 268 EI I E +FL +RT + +Q +++++ +++I Sbjct: 248 EFYIEI-PIEEKIFVFLPIIGMRTPADSKNMYSIELDEKIRPLLQKIVEQIRQELNISID 306 Query: 269 DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF 328 + E H++ + + ++ +P AF M+ +++E ++ + Sbjct: 307 THEFTEKFMYHIMFMINRLRYNVHIDNPMFEDIHYKYPLAFKMAEIAARVIKEDAEVVVT 366 Query: 329 DSD--LIGLYFACALE--RHQNERQPIILLSDQNAI-ATINQLAIERDVLNCRVIIARSL 383 ++ + YF LE ++Q I ++SD+ + A + + I + V + + S Sbjct: 367 QAEMGYLAAYFGVFLEVNTLNQKQQKIAVISDKGRVTAQLFAVQIRKVVDSSSQLDILSP 426 Query: 384 SELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPER 443 SE V+ + ++I H + + YI I + K+ L A + + Sbjct: 427 SEAVSGILDQYDIVICTTEHIIECECPVIYI--HEIFDENEL---KNKLRQAKFCKGTDA 481 Query: 444 FFSAPGSFHYSNV----------RGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 + +N+ E + I L + ++ AD +R+ +E Sbjct: 482 AILDDNWYVMANILKEDTFFNLSEQEDYTSALNYIIDTLEKRGYVDADFKERVWEKESRS 541 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKI--- 550 I N +AIPH + +P+ + I + + + R E ++ Sbjct: 542 SMTIDN-IAIPHAVQKAGDSIVLSVGVFRRPMPYKEDNIQIIFLLALPEEIRDENRLVCV 600 Query: 551 FSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 + + S++ E I Y FM++L+K Sbjct: 601 YDEIMSLVKNDEMIEKITQSENYIDFMKVLYK 632 >UniRef50_C2C4I7 Protein-N(Pi)-phosphohistidine--sugar phosphotransferase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4I7_LISGR Length = 635 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 105/634 (16%), Positives = 216/634 (34%), Gaps = 61/634 (9%) Query: 4 ERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFT-LNGKARIFASGSAGYQ 60 R+ I++ L + + +L + VS RTI ++ YLN + RI GYQ Sbjct: 1 MRREMILNHLLNKEVHISLADLTESFQVSERTIRNEVKYLNEDGIKNGFRIQTLRGQGYQ 60 Query: 61 LEIFERRSFFQLLQKHDND-----------DRLLALLLLNTFTPRAQLASALNLPETWVA 109 L+I + F L+K L L F QLAS L + + + Sbjct: 61 LQIENKPLFTDYLKKQTASFDTQSVSQRLLYLELLLFQQQDFITIDQLASQLQVSRSTIQ 120 Query: 110 ERLPRLKQ-RYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD--- 165 + L R+ + L + G I E+K LA LL + R Sbjct: 121 QDLKRVDTFLHTYGLLLKRKAHYGVQIVGPEKKHRAALAKLLNTSSEQLSQTEAYRSFRK 180 Query: 166 --NLQHLSTACDNQ--HRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEI----KQI 217 ++Q L+ + H + L +++ + L +++ + + Sbjct: 181 TLDIQALTLFIKERVTHYQIYISDVALRNMVDHVCILAFRVSQKNYIRMTGPLEKNPIYT 240 Query: 218 VEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII--------- 268 + A L +Q A+ + + + L Sbjct: 241 ALSKDIAAFIEAQYHLDVPEAEQDFLAEHLIGKVTVDTISK-EEKMRLQAKINDAMTAID 299 Query: 269 ---------DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 D +L + H+ + + + + +L + F++S+ F+ L Sbjct: 300 QQYGTAFQPDEELQNALLLHIYPLMLRLHYNLQLDNPIIEDLYTRYANVFNISISFVQYL 359 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQNERQPI-----ILLSDQNAIATINQLAIERDV 372 ++ D + + + +YFA +LE+ +N++ + +L S A + ++ +E Sbjct: 360 QDNEDFIITKDEIGYVAMYFAASLEKERNQKFRMYKKIGVLCSSGAGAAYLLKMKLESAF 419 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 N I+ S+ EL + + ++I +DD I + + ++K L Sbjct: 420 TN-AEIVTFSMYELDKL-RNSDCDVVITTFPLTIDDLDIPVIETALLPGDQELARLKDTL 477 Query: 433 ATAFIRQQPERFFSAPGSFHYSN-----VRGESWQHITRQICAQLVAQHHITADEAQRII 487 A + Q + P +++ ++ I + C L+ + ++ Sbjct: 478 AFSAETQTSPATDAEPLLSYFAEECFTITEANNYLDILKTRCHFLMEAGYAPPTFLDDVL 537 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE 547 RE + + N +A PH R+ I L QP ++ + + + Sbjct: 538 ERENKMTTIYQNSIAGPHPIQMGARKECIDVIILKQPAYYMDKKVRLIFLLNLDKGHLFI 597 Query: 548 LKIFSYLASILCQH--PAEIIAGLTGYEAFMELL 579 K S L + ++ + + Y F+ +L Sbjct: 598 HKEVSRLMIRIMENDTVRKQLLACKNYAEFISIL 631 >UniRef50_B7C836 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C836_9FIRM Length = 633 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 87/629 (13%), Positives = 237/629 (37%), Gaps = 51/629 (8%) Query: 1 MLNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ML RQLKI+ L+ P E+++ VS RTI +I ++N N S GY Sbjct: 1 MLTARQLKIIKLIMNNPGIHGKEISENLNVSTRTIRSEITFMNDVTNCILIRS-STKQGY 59 Query: 60 QLEIFERRSFFQLLQKHDNDDRL--------LALLLLNTFTPRAQLASALNLPETWVAER 111 + ++ + + + L + +L L+ L L ++ + + Sbjct: 60 MINDEHLDIIRNIVNQDNENVDLAVYRIYKIIGKILFFEDCSIYDLSELLGLSDSVIRKE 119 Query: 112 LPRLKQRYERTCCLAS----RPGLGHFIDETEEKRVI--LLANLLRKDPF-LIPLAGITR 164 + ++ Q + + + ++E+E + ++ ++ ++ ++P L+ + + Sbjct: 120 INKVIQFLLKNYNVELFKLKKDECVILLEESEIRELLFKIVKDMALENPDALMDILYMLL 179 Query: 165 DN---LQHLSTACDNQHRWPLMQGDYLSSLILAIYA---LRNQL-------TDEWPQYPG 211 + +++ + ++ + + YLS L+I+A L ++ ++ Sbjct: 180 SDSWVMKYYKSTKEDVIKIMNGEQVYLSETDLSIFAACILICRVRNLNGYNLEDNQISSP 239 Query: 212 DEIKQ-----------IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVP 260 D++ +E + + + N + T + + + V Sbjct: 240 DDLYTRVITKLCMQSSYLEQADIPILYNLLHTFKIKSTDEVPKITDFTVLVFDEFCNEVF 299 Query: 261 GIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 S+N+ + L + H+ + E + ++++K +P AF++S+ + +L Sbjct: 300 DKYSINLKESEALSSKMLLHIEFMNRRVIGGYELKNPIVDDVKTKFPFAFEISMMIVPIL 359 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRV 377 + + + + + + +Y A LE + + I++ S ++++ + +E N Sbjct: 360 FKYKRVYVTEDEISYLTVYVAQFLENENVKLKTIVVTSQRHSVKQLLTQWLEMYFKNQIA 419 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFI 437 I+ E + + L+I +L+ V + ++ + IE++ + + Sbjct: 420 IVDIINKEALKKMDLTPIDLVITLDSFLILKDVEVF-SMDKLPEIKDIERLNSMIHMIRM 478 Query: 438 RQQPERFFSAPGSFHYSNVRGESWQ--HITRQICAQLVAQHHI--TADEAQRIIAREGEG 493 ++ + + V ++ + + +++ +L I T + ++ RE Sbjct: 479 NKRVSKILDCYIQKEHVKVYPDTKELSELLQEMSQKLHESGFISDTKGFYEDVLLREKNY 538 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY 553 + +++ +PH + L +P+E + + V + E+ + Sbjct: 539 PTNLGSQMMVPHALFTFADKTGIEVALLKKPLEHDGNQVQLVFLLALEKKRNDEMNLLFQ 598 Query: 554 LASILCQHPA--EIIAGLTGYEAFMELLH 580 + + H + +AF++ L+ Sbjct: 599 FFNQIVSHKKYMHELLQSEDSDAFIKNLY 627 >UniRef50_B9DPY6 Putative transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DPY6_STACT Length = 623 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 105/610 (17%), Positives = 205/610 (33%), Gaps = 49/610 (8%) Query: 2 LNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 + ERQ+K++ L E Q T E+A VS RTI DI Y+N + G Sbjct: 1 MIERQIKLIQLFLNNEYQFLTSDEVASFLDVSNRTIRNDIKYINSSFLKDVIKSIKSR-G 59 Query: 59 YQLEIFERRSFF----QLLQKHDNDDRLLA-----LLLLNTFTPRAQLASALNLPETWVA 109 Y L+ +R S L D D+++L LL+ +L +L + + Sbjct: 60 YHLDT-DRYSVEYIESSLKDYTDKDNKILLTLAYQLLMHEEQLTLIKLEKEYHLTKNEML 118 Query: 110 ERLPRLKQ---RYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 + L R+K +++ + R GL ET+ IL N L + + Sbjct: 119 DYLNRIKAWCEKFDVIINMKQRKGLEVIGSETDINNAILHLNQLSSHENSVETLILNELP 178 Query: 167 LQHLSTACDNQHRWPLMQGDYLSSLILAIYAL--------RNQLTDEWPQYPGDEIKQIV 218 H+ + R G S + + + R + + DE I Sbjct: 179 KAHVQIIKEIIKRTLGEFGVKTSDIQIEQLIIHLILIMKRRQSQNELISEEVNDEAFNIS 238 Query: 219 EH-----SGLFLGDNAVRT--LTGLIEKQHQ------QAQVISADNVQGLLQRVPGIASL 265 + +G D T L H Q+ + L++++ S+ Sbjct: 239 KRIVDEINGKLGYDINTETIQLFSFFIGYHFDKFDLGVQQLFIESYINLLIEKMENRISV 298 Query: 266 NI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD 324 D L EN+ H R + +K +P F++ + + + Sbjct: 299 QFTKDKTLKENLYSHFSRTYLRIMKDVYLNNPLTKEIKTLYPFVFNVLYEIVQRMSDDSG 358 Query: 325 IPLFDSD--LIGLYFACALERHQNERQPIIL-LSDQNAIATINQLAIERDVLNCRVIIAR 381 + L + + + ++F +++R++ + +++ I+ + I + VI Sbjct: 359 VELTEDEIAFLTIHFQSSIDRNEQDVIKVVIACFYGIGISQLLATKISKFSNRIEVIDTL 418 Query: 382 SLSELVAIREEIEPLLIINNSHYLLDDAVNNY--ITVKNIITAAGIEQIKHFLATAFIRQ 439 L E+ L++ + N+ + V + Q++ F+ ++ Sbjct: 419 KLEEIEQYDFS-HIDLLMTTHQPENNKIPNHLELLQVTPLFNDNDQHQLQQFMNRK-LKP 476 Query: 440 QPERFFSAPGSFHYSNVRGE--SWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI 497 A +F + + + I ++ L H + + + RE I Sbjct: 477 TMHIDEMAEVNFIVGSTEDQEITMPLIFQKADEILNHNHALIDGYIETALEREKMSSTYI 536 Query: 498 VNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV-LIACAAADARHELKIFSYLAS 556 +AIPH E+ + + + V +A A D +I +A Sbjct: 537 GKEIAIPHGDPEKVSKSHVIIFRSNKGFYWKENKVKLVFFLAIAQRDIELTKRIIQTIAH 596 Query: 557 ILCQHPAEII 566 I + E+I Sbjct: 597 IDEKKINELI 606 >UniRef50_B0NXI9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NXI9_9CLOT Length = 650 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 100/651 (15%), Positives = 229/651 (35%), Gaps = 83/651 (12%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-G 58 L RQ++++ LL +Q + ++ VS +TI DI YL + G Sbjct: 4 LIRRQIELLKLLSKQREYKPASFFSKSLDVSTKTIYTDITYLQSEVEKYKVDLVRAPRIG 63 Query: 59 YQLE--IFERRSFFQLLQKHD-NDDR-----------LLALLLLNTFTPRAQLASALNLP 104 +LE + + LQK + ++D L +L+ ++ + Sbjct: 64 IRLEGEKENIQHMLRDLQKDNLSEDEKYTPEYRRLWILKKVLIDCEIITLESVSKEFLVS 123 Query: 105 ETWVAERLPRLKQRYERTCCLASRPG-LGHFIDETEEKRVILLANLLRKDPFLIPLAGIT 163 +T + + + + + E + G G I E + + N L + + Sbjct: 124 KTSLYQDIAVINKSIESQSDVKLEVGECGICILGEESEIQNAVNNYLLSES----KEEMF 179 Query: 164 RDNLQHLST-----ACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIV 218 D L L + L+ +L+ Y L++ L Q K+ + Sbjct: 180 SDFTHKLGNFFELDVIKAVSDLILNDFEELTE-VLSEYYLKSLLVTLIMQSSRLLKKKHM 238 Query: 219 EHSGLFLGDNAVRT----LTGLIEKQHQQAQVISADN----------------------- 251 +N + I +Q + I+ N Sbjct: 239 NEETEISYNNIRHMETYIVANSIAEQLKYQLHITYSNNDMEYLCRQLYAHRVTHHVKHMR 298 Query: 252 ------VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAA 304 V+ +++R+ I L++ D +L E++ HL + + ++N+K Sbjct: 299 TDYEETVRDVIKRMSEIQKLDLTRDKKLYESLLYHLPPMILRLQNNIQIVNPMLDNIKQE 358 Query: 305 WPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIAT 362 +P F + +T + + + L + + LI L+F AL++ + +++ + + + Sbjct: 359 YPELFTTMWYALTQIELRYQVTLTEDEVSLILLHFQVALDQFEQVGNIVVVCTYGVSSSQ 418 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + +++ + I + +L I L+I + ++D +Y+ V ++T Sbjct: 419 LILSRVKQILPAKDNITVTNTKKLKEIDLSKVDLIISSVD---IEDPEISYVKVNPLLTK 475 Query: 423 AGIEQIKHFLATAFIR-------------QQPERFFSAPGSFHYSNVRGESWQHITRQIC 469 I + + P G F + +S + I Sbjct: 476 DDYANILDAYTKQVLLIKNNVCDNQKNGIKAPTLKKYLEGKFIFLKQDLDSKEKCLDFII 535 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 L + + + + I RE G + +A+PH + ++ R +TL PV+ Sbjct: 536 DVLEKDNAVYDEFREAIYKREKLGVTCLDTGVALPHADPQTIKKSRIILLTLKHPVDWGG 595 Query: 530 EVINHVLIACAAADARHELK-IFSYLASILCQHPAEIIAGLTGYEAFMELL 579 +++ +++ + ++++ + + L ++ + E + +E E+L Sbjct: 596 TLVSLIVVTAFPEEEMNQIRDVINELYQLIGEK--EDVNTFIRFETIQEVL 644 >UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=14 Tax=Streptococcus RepID=Q1JGE0_STRPD Length = 664 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 104/667 (15%), Positives = 218/667 (32%), Gaps = 97/667 (14%) Query: 1 MLNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGS- 56 ML++++L I+ L ++Q + LA+ G+S RT+ + + L +L S Sbjct: 1 MLSKKELAIITFLIHHKEQFVSSATLAEVIGMSDRTVRKYLKELISSLPEHGAHIISKQG 60 Query: 57 AGYQLEIFERRSFFQLLQKH-----------------DNDDRLLALLLLNTFTP-RAQLA 98 GY LEI +F Q+ D +D +L +L Sbjct: 61 RGYCLEIDHSMAFDIFWQESVTSKKRLADVTQVEESVDREDYVLHKFFFEDAVQDFEELC 120 Query: 99 SALNLPETWVAERLPRLKQR---YERTCCLASRPGLGHFIDETEEKRVILLANLLRK-DP 154 L + T + L +K+R Y+ + + + E + + I+ + D Sbjct: 121 QELYISRTTLKHVLAGIKERIIPYQLELEITHQ-HIQIRGKEEDIRHFIMDYFFVTSFDN 179 Query: 155 FLIPLAGIT------------------RDN-------------------LQHLSTACDNQ 177 L + G T RD +Q + + C + Sbjct: 180 TLSTMVGNTFLEGINFAEIMIIVLYECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLE 239 Query: 178 HRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLI 237 + +A+ L ++P +E I H + Sbjct: 240 LFSIPIAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGK-HWQDDNT 298 Query: 238 EKQHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQS 296 +++ Q D+++ + ++ + + + D L + + H++ + Sbjct: 299 DEKLQ-------DHLKACIAKISQLTGMTLETDTNLFQGLLAHMMPLTTRLENHIQLTNP 351 Query: 297 SMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN-ERQPIIL 353 +K+ +P F ++ + L + + D + I L+ A+ER+ N + +++ Sbjct: 352 LTEEIKSQYPEIFTLTKQTFSDLLVCQNNDVSDDEWAYISLHLMAAIERYSNRHKLRVLV 411 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPL-LIINNSHYLLDDAVNN 412 + + + R+ I +S E ++ + LII++ + Sbjct: 412 VCATGYGSAMMLKNRLEKEFEGRLRIVDVISYYEITEERLKTVDLIISSISLANLMFLTP 471 Query: 413 YITVKNIITAAGIEQIKHFLATAFIRQQPERFFS---------------APGSFHYSNVR 457 ITV ++ IE I+ F+ ++ S +P F Y + + Sbjct: 472 AITVSVFLSNQDIETIRQFIGEQEGIKKEVSLPSQMSLAKAEQLLTGVFSPNRFLYLDEK 531 Query: 458 GESWQHITRQI-CAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRG 516 + R I C D +++ RE + LA PH + + Sbjct: 532 ISKEDLLLRMIACLDEAGTETFVEDFYHQMVLRENYSPVIYGEVLAFPHPANPMTYSEQV 591 Query: 517 FFITLAQPVEVN--NEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLT--GY 572 +P+E + ++ ++ V + + H LK S + A L Y Sbjct: 592 VVAICREPLEWDKAHQAVHFVFLLSPSKGHNHRLKYVSPGLASFVNQVELQQALLEEPNY 651 Query: 573 EAFMELL 579 FM + Sbjct: 652 SKFMTVF 658 >UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZWZ8_ENTGA Length = 640 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 109/636 (17%), Positives = 228/636 (35%), Gaps = 61/636 (9%) Query: 4 ERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQ 60 RQ KIV+ L ++Q P LA + +S RT+ DI +L + SAGYQ Sbjct: 1 MRQEKIVEYLYAKKQAIAPKALAAEFQISERTLANDIKWLRDIGRTEGFSIERIRSAGYQ 60 Query: 61 LEIFERRSFFQLL---------QKHDNDDRL----LALLLLNTFTPRAQLASALNLPETW 107 LEI +++ F + L + ++R+ L LL + Q++ L + + Sbjct: 61 LEISDKKKFLRFLSHAKRQEKIDNGNPNERIKNIELLLLFHEEYITMQQISEWLEVSLST 120 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRK---DPFLI---PLA 160 V + +++ + L S+ G I TEEK+ + L+R P L Sbjct: 121 VKADIKQVELFCKDYGLTLFSKAHYGLKIVGTEEKKRQAILYLIRNIIHTPVLTERYKAF 180 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYAL-------RNQLTDEWPQYPGDE 213 D S + + L D + I+ L N LT++ Sbjct: 181 HFVFDEEALRSCLSEKLQQHQLKASDIVFENIIQHIRLLVFRITQNNTLTNDERTVRTAT 240 Query: 214 IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI-----------SADNVQGLLQRVPGI 262 K + L +T +++ + + S ++ +++ + Sbjct: 241 DKYDLLTEDLVSYLETAYPITFSTMEKNYLHEQLRGKFSVLDDRTSNQQLKQAIEKTLEL 300 Query: 263 ASLNI-----IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 L D +L + H+ L + ++++ + F++++ FI+ Sbjct: 301 VDLRYHTQFRTDQELGNALLMHVAPLLQRLYTGHQLDNPIIDDIYTQYANVFNVAMVFIS 360 Query: 318 LLREQLDIPLFDSD--LIGLYFACALERHQNE-----RQPIILLSDQNAIATINQLAIER 370 L + LD + + + +YFA +LE+ N+ ++ ++ S + + ++ +ER Sbjct: 361 ELNKDLDADISKDEIGYVAIYFAASLEKQANQLIDDYKKIAVICSTGGGASYLLKVNLER 420 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINN-SHYLLDDAVNNYITVKNIITAAGIEQIK 429 + + + +L+E+ I + + L+ + T+ N IE+ Sbjct: 421 -LFSNAEVTTFALNEVDQIDKSFDLLISTVPLDQEQFAIPIIYTKTILNRAEINKIEKDL 479 Query: 430 HFLATAFIRQQPERFFSA---PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 L + + F + + E + + A+L + Sbjct: 480 SLLRESENKVFDVHQFILSLFDPQWFQIDTESEDYLQLLESEAARL-EDGWAEQGFKHSV 538 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARH 546 + RE + + N +A PH + R I L + + + + I + + D + Sbjct: 539 LEREKMIDTIYQNGIAGPHPMEQAAIREVIDVILLRKSIWYSKKEIKVIFLINIKKDHLN 598 Query: 547 ELKIFSYLASILCQHPA--EIIAGLTGYEAFMELLH 580 K S L + + A +A +T ++ F + Sbjct: 599 LHKEISRLMIKMMEDQALDNQLAKITNFQDFKSYIQ 634 >UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WHN0_STRDG Length = 661 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 92/655 (14%), Positives = 211/655 (32%), Gaps = 84/655 (12%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA---S 54 MLN ++ I+ L Q T LA S RTI I L+ L + F Sbjct: 1 MLNTKEKIILQYLYQHRGDYSTSKVLADYLSFSDRTIRTYIKKLSTDLPVEDTGFTIVSK 60 Query: 55 GSAGYQLEIFERRSFFQLLQKHD-------------NDDRLLALLLLNTFTPRAQLASAL 101 GYQLE+ + ++ L K++ + L L+ LA L Sbjct: 61 QGYGYQLEVLDDDTYHHFLVKNNLAVGMDYGDIDNRHKAILNKLIFKEETVLFDDLADQL 120 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + + ++ +++ + + + S+P G ++ E+ + + + + F ++ Sbjct: 121 FVSRSTLSSDFKKIRSQLAKYQLSIESKPYRGVYVLGDEQDKRHFIMDYFFGEHFHQNMS 180 Query: 161 GITRDNLQHLSTACDNQHRWPL--------MQGDYLSSLILAIYALRNQLTDEWPQYPGD 212 ++ + + + L DY ++ AL Q + + Sbjct: 181 NFVGKDILDIPLSMEELTIIVLDECRNQELKLSDYAIQNLVIHLALAIQRFQKGFRIAPV 240 Query: 213 EIKQIVEHSGLFLGDN-----------------------AVRTLTGLIEKQHQQAQVISA 249 E+ + L + N A+ ++ + +Q +A +++ Sbjct: 241 ELCECKYQKELLVARNIADRLANRLGQEELIPEEETAYIALHLISKSVAEQDPEANLLNL 300 Query: 250 DNVQGLLQRVPGIASLNIIDAQ----LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAW 305 Q L+ + + D L+E + HL L V + +++ + Sbjct: 301 R--QELITALDNCDTSQGYDFSSDMALIEGLLMHLEVLLERLVNNIHLDNPLLEDIQKRY 358 Query: 306 PAAFDMSLHFITLLR--EQLDIPLFDSDLIGLYFACALERHQNERQPIIL--LSDQNAIA 361 ++ +F+ L ++ + + + L+F ++ER + + + +L + A Sbjct: 359 GDVLKLTENFLGDLPTFQKYYLSQDEIAYVSLHFMASIERQKEKHKLTVLVICATGFGSA 418 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + + I ++ I + + + I++ +TV ++ Sbjct: 419 QMLKNRITNELGQLVTISDVIGYYDLDNDKLKDVDAIMSTIDLSNLVFNIPVLTVSVFLS 478 Query: 422 AAGIEQIKH---FLATAFIRQQPER-------------FFSAPGSFHYSNVRGESWQHIT 465 I++ K + R+ + + +F + S + Sbjct: 479 DQEIQEAKQTFSKIQGKQRRRNITARDLSLDTAASAFKHYFSEENFLV--LENASKAEVM 536 Query: 466 RQICAQLVAQHHITADEAQRIIA-REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP 524 ++ +LV E +I RE + +A+PH + + + Sbjct: 537 EEMIRRLVPDDSDHQKELADLIRGRERLSTLVFDQEIAVPHPLKPISEKHQIAVAVVKNG 596 Query: 525 VEV--NNEVINHVLIACAAADARHELKIFSYLASILCQHPA--EIIAGLTGYEAF 575 V E I + + + LK + L P E + +E+F Sbjct: 597 VYWEDGFEKIKLIFLVAPSVYTNEGLKPITNRIVDLVDLPEVKEQLINTEDFESF 651 >UniRef50_C0EX25 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX25_9FIRM Length = 658 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 87/626 (13%), Positives = 218/626 (34%), Gaps = 63/626 (10%) Query: 5 RQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI 63 R +K+++ L +++ GVS +T+ + L+ TL + Q+ + Sbjct: 27 RDMKMIEYLRDYEVVELKAMSEYLGVSVKTLKNQLKELSETLKEFGV-DVQFVSSNQILV 85 Query: 64 FERRSFFQLLQKHDNDDR-------LLALLLLNTFTPRAQLASALNLPETWVAERLPRLK 116 F +++ LL L+L + F ++A L + +++ + L + Sbjct: 86 KGHEKFAEVMSVSIPRFEMEFERRFLLLLVLHDNFLTIQEIADELLVSKSYAEKHLAAIM 145 Query: 117 QRYERTCCLASRPGLGHFIDETEEKRVI--LLANLLRKDPFLIPLAGITRDNLQHLSTAC 174 ++Y G+ + + + + V +L L + +++ L + Sbjct: 146 KKYPEDIQAQRHYGIRYAASQNKRREVFVKILFPYLFGEDYIVALEQFDSLHFPLFHYFT 205 Query: 175 DNQH-------------RWPLMQGDYLSSLILAIYALRNQLTDEWPQYP---GDEIKQIV 218 Q W + + L L L I L E + P ++ Sbjct: 206 KEQMLRTRGAIQALQRLEWFQLTDESLQQLFLYILFLTRHADSENTEKPVAVQEDFINTQ 265 Query: 219 EHSGLFLGDNAVRTLTGLIEKQHQQAQVISA--------------------DNVQGLLQR 258 E GL+ L + + + + + ++ +L+ Sbjct: 266 EFDGLYEWILGWCQEFRLPDSKEELRYMYTLLLSLRKQKIACQDQIMDKMRHPIKEILKG 325 Query: 259 VPGIASLNII-DAQLVENITGHLLRCLAAPVW-IAEHRQSSMNNLKAAWPAAFDMSLHFI 316 + S + D L+E ++ H+ + E + + ++K +P F+M+ Sbjct: 326 ISERLSADFSEDEDLIEGLSSHIYTTILRGNHLDVETDEYMLKSMKRQYPFGFEMAAIAA 385 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSDQNAIATINQLAIERD 371 + + ++ + ++D + ++F A+ER ++ + + II+ A A I + IER Sbjct: 386 DYIADIYNLSMKENDLIYLAIHFQAAIERMKDAGEKTKIIIVCHFGAAAARIIRSKIERK 445 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 ++ V SL E ++ ++ D + I + + +++IK Sbjct: 446 LVGVEVTGMYSLQEFKQLKNPDCDYIVTTERILKADFPI---IYISMALPEREMQKIKEG 502 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + + E + ++ + + + L+ + +T Q ++ RE Sbjct: 503 IKEIQVNHLLE---LNILEAIILPIEEKNMESAVKAMVQPLLEEDFVTEKYLQSVLEREE 559 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA-RHELKI 550 +N +A+PH + R + P+ ++ ++ + +++ + + + Sbjct: 560 MSSTS-LNHIALPHGNPAMVQNTRLVIGRMNHPILWDDSKVSCAFLFAVSSEMLKEKPML 618 Query: 551 FSYLASILCQ-HPAEIIAGLTGYEAF 575 F+ + E I L + Sbjct: 619 FNTFYRTMADPEVEESIKKLQMEKNL 644 >UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFF6_9BACI Length = 643 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 99/639 (15%), Positives = 219/639 (34%), Gaps = 64/639 (10%) Query: 1 MLNERQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 M++ER K++ + + ELA+ GV RTI I LN LNG A F G+ Sbjct: 5 MIDERAAKMLAIARTKTYHSLDELAEAMGVGTRTIRNYIKQLNEDLNGIASFFNERGKGF 64 Query: 60 QLEIFERRSFFQLLQKHDNDDRLL------------ALLLLNTFTPRAQLASALNLPETW 107 + +I ++F L++ +D L L+ LA ++L T Sbjct: 65 RFDINNMKAFQSYLEESSPEDSSLNSQKGRIGFIIDRLINSEETYTLDDLAEEMHLGRTT 124 Query: 108 VAERLPRLKQRYERTCCLAS-RPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGITRD 165 + L + E + +P G + E R +L +L PL + Sbjct: 125 LVNELKKAAVSLETYKLIIHGKPNRGMELSGRELDLRFYILDHLYDVLYGDYPLDEDITE 184 Query: 166 NLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQI-------- 217 +++ +S + + +++ +I+ L+N + + I Sbjct: 185 SIERISHEYNLESPTQERLMEFI--IIMLDRLLKNHHLEAIEEKHKKLIGTQEHGIALEI 242 Query: 218 --VEHSGLFLGDNAVRTLTGLI--------EKQHQQAQVISADNVQGLLQRVPG----IA 263 L + L I A + D+V+ LL+++ Sbjct: 243 VEAIQKQLPIEIPEAEALFITIPIAGRRTPTNNRTLADIAITDDVRRLLEQILEQVGFKK 302 Query: 264 SLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 + + +++ HL L ++ + + + N+K +P A+ M+ ++ + Sbjct: 303 EIIEQNESFFQDLLYHLTFMLNRLIFGLRLKNALLANVKEKYPVAYKMAEISGQVIESRY 362 Query: 324 DIPLFDSD--LIGLYFACALERHQNE----RQPIILLSDQNAIATINQLAIERDVLNCRV 377 + + + + + YF + + + ++ ++ A + + +ER +LN Sbjct: 363 GLEVPEDELGYLAFYFGVFIGQSDIKVKRFQKAAVVCGTGRGTAKLVSIQLER-ILNQDT 421 Query: 378 IIARSLSELVAIREEIEP-LLIINNSHYLLD--------DAVNNYITVKNIITAAGIEQI 428 I +E A++E ++ L+ + + + + + VK I A Q Sbjct: 422 EI-NLFAEKDAVKEVLDSYDLVFSTVKLPFETHAPFIMINEIFDESRVKREIEKAAYRQR 480 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 + + + + + F + +G + +L + +R+ Sbjct: 481 LNIQNGSEYQSVMAQLLAKESFFQLDSSKGYHEN--VFHMVNELTEIGRLDLGFLERLKE 538 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE +G + +A PH +++Q + V N + V + + Sbjct: 539 REEKGSMVFDRYIAFPHTFNQQSNDIELAVGIFPEGVMENGREVRLVFLLGLPEEQNECN 598 Query: 549 -----KIFSYLASIL-CQHPAEIIAGLTGYEAFMELLHK 581 KI+ + I + + YE F+ + + Sbjct: 599 ESLIVKIYDEIIGIANNEELIAQLVEAASYEDFVSSIER 637 >UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6G9_9CLOT Length = 673 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 86/644 (13%), Positives = 227/644 (35%), Gaps = 67/644 (10%) Query: 5 RQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAGYQLE 62 ++ KI+ L + + +A++ V+ R++ I LN L A+I GY+LE Sbjct: 26 KEFKILTLCKNKEFANINHMAEELKVTTRSVRTYIKQLNENLGEDIAQIIYVKGYGYKLE 85 Query: 63 IFERRSFFQLLQKHDN--------DDRLLALLLL----NTFTPRAQLASALNLPETWVAE 110 I + +F L +++ D+R+L LL N QLA +++ T + Sbjct: 86 IKNKEAFELLFEENKKISFDFNVKDERILYLLDFFTEYNDVITIDQLAEQISVGRTTIVN 145 Query: 111 RLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFL-IPLAGITRDNLQ 168 + ++ E L + G ++ E + +LL N + KD + + Sbjct: 146 DIKSTREILNEYNLDLIKKQNFGMWLKGNEFDKRLLLINYIYKDSKNDLKNSKYVNGVDA 205 Query: 169 HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEI-------------- 214 L + + ++ ++ + ++ L G+EI Sbjct: 206 RLLKQLKTKILRLFKEDNFYATNQIFEETIKYILVQIVRIKNGNEIVEYDKRFDLLGSYD 265 Query: 215 -KQIVEHSGLFLGDNAVRTLT-------------------GLIEKQHQQAQVISADNVQG 254 + + + + +N TL Q + +D ++ Sbjct: 266 EYNLSQKIKVIVEENFDTTLNEYETLYLTLPLVSGNAAPISKFMSNKPQLRENISDLMEK 325 Query: 255 LLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 + + + + I D L +N+ HL L ++ + + + ++K + ++++ Sbjct: 326 IFKEIYIRMGIIISDQTLRDNLGYHLEFTLNRLLFNIKLKNLLLEDMKENYVLPYNLAKI 385 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERH---QNERQPIILLSDQNAIATINQLAIE 369 ++ ++ + + + I ++F LE++ ++ I+ S + + I Sbjct: 386 SADVIENVYNLVMPEDEIGYIAIHFGSYLEKNIISNTLQKVAIVCSTGLGATNLITIRIR 445 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 + + I S+ ++ + L+ + + ++V T+ + + Sbjct: 446 KIIGENVEIDTFSIFDIDKVNLSQYDLVFTTSDIDINSNSVLKIDTILDESKLRNKIEKM 505 Query: 430 HFLATAFIRQQPERFFSAPG--------SFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 +L + + + A ++S + ++ + + +++ + Sbjct: 506 IYLNNSNLSKNINNVKLADNLIVGVFLHEKYFSVLNNKTISAALKNMIDKMMQDGVVGEK 565 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA 541 + I+ RE + + L +PH +++ L +P++ I +++ + Sbjct: 566 FKKDILEREKSHPTIFKSGLLLPHSVNDKSNELCVSIGVLQKPIQYQGIEIKIIMLIAFS 625 Query: 542 ADARHE---LKIFSYLASI-LCQHPAEIIAGLTGYEAFMELLHK 581 D ++ +K++ SI + ++ + L K Sbjct: 626 GDDQNSDLLVKVYEEALSIGQNEKYINQLSKCRDFYDLTRTLLK 669 >UniRef50_C1IA41 Transcriptional antiterminator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IA41_9CLOT Length = 632 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 89/629 (14%), Positives = 204/629 (32%), Gaps = 61/629 (9%) Query: 4 ERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAGYQ 60 R KI++ L A VS +TI ++ YL I + GY Sbjct: 1 MRNRKILEQLFNSDTYLNLDYFADFFKVSTKTISNNMKYLIKDGKNNGFDIRLKRARGYY 60 Query: 61 LEIFERRSFFQLLQKHDNDD----------RLLALLLLNTFTPRAQLASALNLPETWVAE 110 +EI + +F ++K ++ ++ LLL F LA +++ ++ + Sbjct: 61 IEINNKDAFNSYIEKISFNETFSPEYRTSYIIVLLLLNRDFITMDYLAEKISVSKSIIKS 120 Query: 111 RLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQH 169 + +++ R L + G I + R + I + L+ Sbjct: 121 DMRKVELELDSRNITLEKKAHYGIKIQCDDYTRKKFILMYYEDGNEFIN--NYIENGLKE 178 Query: 170 LSTACDNQHRWPLMQGDYLSSLILAIYALRNQL--------------------------T 203 + L++ + L++ + + + + + Sbjct: 179 RNFKVIENKLIELLKENSLNTNYIELEQINSFIKITICIHNEVYNNYFNYEKEKSTYFRV 238 Query: 204 DEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIA 263 + +EI I + + ++ +++ +Q + Sbjct: 239 ADELSNTIEEIYDIKLNENELIDLKKYLIKKTKKFTYNEIYIEDLRKDIERFVQEIDCEY 298 Query: 264 SLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 N D + +N+ H+ + + + +P FD+++ F + + Sbjct: 299 DTNFYEDEEFKKNLLYHISLLINRLQKETSFSNPLVKEISIKYPTIFDIAIKFSNEIEGK 358 Query: 323 LDIPLFDSD--LIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIERDVLNC 375 I + + I +FA LE+ +N + I+ S A + +L +E + Sbjct: 359 YKISISQDEIGFIATHFAAHLEKEIYNKIRNYNKIAIICSSGKGSALLMKLKLEMLFSSS 418 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL--- 432 + L E E P +I N + + V +I I +I++ + Sbjct: 419 DIRTYSLLDEDE--VENFNPDIIFTNWQLSRGFKMP-VVYVDELIDDLDILRIRNIIKMK 475 Query: 433 --ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE 490 + +FI+ E + ++ + ++ + A ++ + A II RE Sbjct: 476 RTSNSFIKTNKEFMNLFKKETFRVVTKNNNYMELLEEMAKGVEALGYVDENYASYIIERE 535 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLA-QPVEVNNEVINHVLIACAAADARHELK 549 + N +AIPH + + + N + + + + L Sbjct: 536 EYMSTIYDNGVAIPHPINICGKDNLLSVAIIKNNNFTHNKKPVKIIFMVALEKGNMDYLG 595 Query: 550 IFSY-LASILC-QHPAEIIAGLTGYEAFM 576 + + L I+ ++ E + G +E F+ Sbjct: 596 MVTQILFEIMKDEYLVEKLRGSETFEDFL 624 >UniRef50_Q03GK2 Transcriptional antiterminator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GK2_PEDPA Length = 625 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 98/633 (15%), Positives = 228/633 (36%), Gaps = 66/633 (10%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M +++ K+++LL+ + EL+ VS RT+ + L + + S G Sbjct: 1 MSEKKERKMLNLLKSDTDWHSVQELSIFLDVSDRTVKKYYKTL-----AENQPVISSKYG 55 Query: 59 YQLEIFERRSFFQLLQKHDNDDR------------LLALLLLNTFTPRAQLASALNLPET 106 Y+ + S+ +++ + ++D++ L L+ +N+ L++ + E+ Sbjct: 56 YK---YNGPSYREIINESNDDEKIPNTKQERIFYVLNKLISVNSPINIYDLSAEIFTSES 112 Query: 107 WVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF--LIPLAGITR 164 + + ++ + G I +E + +L+++L K+ I I Sbjct: 113 NLKLVFGDAENYVKKFDLEIKKQGDYFSILGSESDKRHMLSDMLYKESDGNFINKVAIQE 172 Query: 165 -------DNLQHLSTACDNQHRWPLMQGDYLSSLIL----AIYALRN----QLTDEWPQY 209 D+L ++ ++ L D L+++IL AI +RN Q D + Sbjct: 173 NFPEVNLDSLYAITQKFAKKNEIYLNTFD-LNNIILHITIAIQRIRNGYQFQTRDNRFNW 231 Query: 210 PGDEIKQIVE------HSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG--------L 255 + Q + D + +L +I+ + + DN+ + Sbjct: 232 KSSKFAQELLNEVEKSQKNFKFPDEDLVSLGLVIDGSVSRWTIDMKDNISKETLNLIKSI 291 Query: 256 LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 L V I +++ + + H+ R + + +KA P ++ ++ Sbjct: 292 LSYVRSIYRIDLTGPEFLNQFAIHVSRLIQRLKSGKSIQNPMATQMKAQSPTVYECAVLI 351 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERH--QNERQPIILLSDQNAIATINQLAIERD 371 + Q+ + + D++ I ++ A+ + NER +I++ ++ + Sbjct: 352 SHKIASQVGVEVPDNEIAYIAMHIGNAIAKQIEDNERLKVIIVVPDYQDKFLSIVDQIDK 411 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 N + I + ++E + E+++ L+ + N + V + +I+ Sbjct: 412 NFNNELSILKVVTEETDLSEKVDFLITLKNKINIDLPFVQISPFLTRTDNGNIRNKIEKI 471 Query: 432 LATA---FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 + T Q FF F N + +++ I ++ D + + Sbjct: 472 VNTKKQLTFDHQIGSFFDER--FFKINRNLKDKENVINYISDVFYEENITKKDYREDLFE 529 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL-IACAAADARHE 547 RE +AIPH + +GF + + V +A D++ Sbjct: 530 RERMSSTAFGK-IAIPHSLEMKALNTKGFIYINPHGITWGANKVYLVFALAVKKQDSKMF 588 Query: 548 LKIFSYLASILCQ-HPAEIIAGLTGYEAFMELL 579 IF L+ ++ + + T Y+ F+ L Sbjct: 589 RNIFDRLSDVMTEGKNIATLVQSTSYDDFLNKL 621 >UniRef50_B9Y2N3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2N3_9FIRM Length = 627 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 91/625 (14%), Positives = 201/625 (32%), Gaps = 58/625 (9%) Query: 6 QLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQL-- 61 + KI+ L++QP + LA+Q VS RTI I +N + + + + GY L Sbjct: 5 KEKIILQLQKQPEPISSTRLAEQLHVSSRTIKNHIKGIN---QEQPNLVQATAKGYILNK 61 Query: 62 EIFERRSFFQLLQKHDNDDRLLALLLLNTFTP---RAQLASALNLPETWVAERLPRLKQR 118 ++ Q ++ + L L L L + + + + ++ Q+ Sbjct: 62 QMSLPVPEETPAQSYEERFSYITHLFFVDHASSLNLYDLCDELYLSYSSMKQLISKVNQQ 121 Query: 119 Y-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQ 177 Y L + + KR L L ++ A + + + + A Sbjct: 122 YDAYDLSLKCKNDTIFLVGTERNKRRFLTQTLYKEAAGHFVDAAMLKTHFPEIDIAYLQT 181 Query: 178 --HRWPLMQGDYLSSL---------------ILAIYALRNQLTDEWPQYPGDE--IKQIV 218 H + Y++ IL A + +P E I Sbjct: 182 TMHNIFMKYNCYINDFGYTNLLLHITVILDRILNGNAFSETNGRQETVHPICEELIATFS 241 Query: 219 EHSGLFLGDNAVRTLTGLI---------EKQHQQAQVISADNV---QGLLQRVPGIASLN 266 H G+ + + LI + ++ ++ + L Sbjct: 242 THFGVQFNPLERQNMNELITANINFMQRKDDETLKTIVGPQIFKLTHEIIDEINRRYHLQ 301 Query: 267 IIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIP 326 + L+ ++ H + + ++++ P +D ++ L E +I Sbjct: 302 LNKETLLVPLSLHFKNLFYRSQQQTSLKNPLLETIQSSCPLLYDCAICITDYLDEHFNIQ 361 Query: 327 LFDSD--LIGLYFACALERHQN--ERQPIILLSDQNAIATINQLAIERDVLNCRVIIARS 382 + + + ++ LER Q ++ LL + +II Sbjct: 362 ISPDETAYLAMHIGADLERQQKDIKKLKCALLCPDYQQNQQQIYNCLLIHFDSDIIIPTV 421 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE 442 +S + ++ LL + I + +I+A +++I + T R++ + Sbjct: 422 VSFEEELEDKSYELLFTTV---PVHANQGFTILLPPMISAMNLKEIYSQIQTVLDRKKMQ 478 Query: 443 ------RFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENL 496 F +P F+ + I + +C +L +H +++ ++ RE Sbjct: 479 ILTEYYPQFFSPALFYLDKQADSRREDILKILCRKLRNEHFVSSHFLDEVLKREQAATTA 538 Query: 497 IVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLAS 556 +AIPH + ++ + ++ VL+ H K Sbjct: 539 FGQ-IAIPHSMKMDCEKTGLAIAISPAGIQWGTQRVHIVLLIAINEKDSHLFKELYEALI 597 Query: 557 ILCQHPA--EIIAGLTGYEAFMELL 579 +L P+ E++ +E F ++ Sbjct: 598 LLFSDPSILEVLRQCKTFEEFTNVI 622 >UniRef50_B2TIY2 Putative transcription antiterminator n=3 Tax=Clostridium botulinum RepID=B2TIY2_CLOBB Length = 654 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 96/653 (14%), Positives = 237/653 (36%), Gaps = 78/653 (11%) Query: 2 LNERQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG-Y 59 L + I+++L + + + GVS R+I + L + + + Y Sbjct: 6 LERKLFTILEMLADSKGNALKDFSDELGVSTRSIRTYLKQLQEEIPKEVVEIVKTNNSEY 65 Query: 60 QLEIFERRSFFQLL-----------QKHDNDDR----LLALLLLNTFTPRAQLASALNLP 104 +L I + F QLL Q ++ ++R + L+ LN LA +N+ Sbjct: 66 KLNIKDDEKFKQLLELNRRQKQKFCQLNNPEERIDYLINRLVELNEIVTIDDLAEEMNVG 125 Query: 105 ETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGI 162 T + + L ++ Q+ E L + G I+ E R+I+L ++ + I L Sbjct: 126 RTTLVKDLKKVDQKLDEYGLVLKRKTNSGIKIEGDEINLRLIILEHICKTYNDSIILLES 185 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDY------LSSLILAIYALRNQLTDEWPQYPGDEIKQ 216 + Q L + + +++LI I + +L ++ + Sbjct: 186 NNILTKKEVIKLQEQIVLNLKENKFSVTEALINNLIRYITVMLMRLKNDKNITSLQSQYK 245 Query: 217 IVEHSGLFLGDNAVR-TLTGLIEKQHQQAQVI---------SADNVQGLLQRVPGIASLN 266 I++ S + ++ T+ L +K+ ++I +A +L+ + ++ Sbjct: 246 IIKESEEYEIGKTIKSTIEALKDKKIDDLEIIFIVMPLLGRNAPLYHEVLRNLTIGENIT 305 Query: 267 II------------------DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 ++ D QL++ + HL L V +++ + +K + Sbjct: 306 LLRKQIFDKVFEFTGLSLEEDEQLIQGLEYHLYYALNRIVLNIKYKNPMLKEIKEKYKLP 365 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI--ILLSDQNAIATIN 364 ++++ +++ ++ + + D + + L+F +ER I + + T Sbjct: 366 YEVAKIAASVIEDKYQVQVEDDEVGYLALHFGTYVERAGKSFIKIENAAIICGTGLGTAK 425 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 L I+ + I +S S+L E +I L + + + +I + Sbjct: 426 LLIIKLKKILGEEINFKSFSDLDFTEEMASNYDMIFTLVDLDINTEIQIVKITSIFDESQ 485 Query: 425 IEQIKHFLATAFIRQQPER-----------FFSAPGSFHYSNVRGESWQHITRQICAQLV 473 ++ + F+ + E+ F+ + ++ + L+ Sbjct: 486 LKG--EIESQIFLNKTNEKRNDTEQYILNGMLDKKLVFY---LNKNNFMDNLEYMLDSLI 540 Query: 474 AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVIN 533 + ++ + +R+IARE + +A+PH E+ + L + + V+ + + Sbjct: 541 KSNIVSNEYKERVIAREQKAGTAFGGYIALPHAVDEKVNNVIVSYGILDKLIMVDGKEVG 600 Query: 534 HVLIACAAADARHELKIFSYLASILCQHP-----AEIIAGLTGYEAFMELLHK 581 +++ +++++ I + + + Y+ F E+L + Sbjct: 601 LIILLVIPSESQNSQDIIVKTYQEIIDLSSDKKIVQKLIKSKNYKEFKEVLGR 653 >UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 Tax=Streptococcus RepID=B9DU03_STRU0 Length = 655 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 93/656 (14%), Positives = 205/656 (31%), Gaps = 90/656 (13%) Query: 1 MLNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA--SG 55 ML +++ I+ L T ELA+ S RT+ I L + K + Sbjct: 1 MLGQKEKLILQYLYLNRGNFVTSKELAEHLSCSDRTVRTYIKTLISFIEKKEGLEIISKQ 60 Query: 56 SAGYQLEIFERRSFFQLLQKHD-------------NDDRLLALLLLNTFTPRAQLASALN 102 GYQL++ + L+ ++ ++ + L+ L L Sbjct: 61 GYGYQLDLANESVYLNLISDNNIRLGTENIDINDRHNFIINQLIFEQKEIFFDDLMDQLY 120 Query: 103 LPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDE-TEEKRVILLANLLRKD------- 153 + + ++ +++ R + SR G ++ KR ++ + Sbjct: 121 VSRSTLSSDFKKIRHELARYDLKIESRANKGVYVSGAEHNKRHFIMDYFFSGNFLKNIHQ 180 Query: 154 -------------------------PFLIPLAGITRDNL-QHLSTA---CDNQHRWPLMQ 184 + L+ NL H++ A ++ + + Sbjct: 181 YVGDDFFKLPISFEELTIIVLDECRSQSLKLSDFVIQNLIVHIALAISRVNDGFKISQLS 240 Query: 185 GD---YLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH 241 D + + +++A LR +P +EI I H L ++ T ++ Sbjct: 241 IDEKKFKTEILVATNILRRVEYVTGTDFPTEEINYIALH----LISESIHTDNSESLERI 296 Query: 242 QQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 Q +S + L D +E + HL L ++++ Sbjct: 297 SLRQDLSEAAAEIDLHYGYQF----AQDFTFIEGLLKHLEVLLERVKNNVRLDNPLLDDI 352 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER--HQNERQPIILLSDQ 357 ++ + AF +S ++ L + L D + + L+ +ER N+ +++ + Sbjct: 353 QSQYKEAFVISRSLMSHLNYFKEFHLSDDEIAYVTLHLLAGIERFYQNNKLNALVICATG 412 Query: 358 NAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVK 417 A + ++ +E ++ I+ + LII+ TV Sbjct: 413 YGSAQMLRMRLENELGRQLNIVNLVGYYDITDARLEGIDLIISTIDLSNLVFSVPVFTVS 472 Query: 418 NIITAAGIEQIK----HFLATAFIRQQPERFFSAPGSF-------HYSNVRGESWQHITR 466 + ++ IK H + Q+ S SF + + + + Sbjct: 473 VFLKDEEVQMIKDGLLHLESKHHRSQKESGSLSDQSSFTRYFSKDRFIILEKSDKKTVLS 532 Query: 467 QICAQLVAQHHITADEAQR---IIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQ 523 ++ A L+ + I RE + +A+PH ++ + + Sbjct: 533 KLVA-LLDDGDCEEYQVSMLDLIANRESMSTVIFDQEIAVPHPLKAIDKEGKIGVAIVPD 591 Query: 524 PVEV--NNEVINHVLIACAAADARHELKIFSYLASILCQHPAEI--IAGLTGYEAF 575 V+ I + + + L + L L ++P I ++ F Sbjct: 592 GVDWEEGFNAIKIIFLVSPSIYKNDGLSSMTKLMVDLTENPQAKEAIIKSQTFDEF 647 >UniRef50_C9A1R6 Predicted protein n=4 Tax=Enterococcus RepID=C9A1R6_ENTGA Length = 651 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 92/588 (15%), Positives = 207/588 (35%), Gaps = 64/588 (10%) Query: 13 LEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFE---RRSF 69 ++P A+ VS ++I +D+D L K + + G +LE E + +F Sbjct: 104 FSKKPMHYQGFAEYFYVSYQSIKKDVDELFAFCQKKKVRASMSAKGLKLEEEESVQQATF 163 Query: 70 FQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRP 129 L+KH + RL + F P+ + + E + +L + + ++ Sbjct: 164 KSFLEKHTDSARLDHSAIQTLFDPKIVTLTTALISEISLT-LGRQLNSYFVESLTVSL-- 220 Query: 130 GLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLS 189 E R+ L +L +++ + + L+ + Sbjct: 221 -------EIFLSRICLGRHLEQQE-------NLGFEKLKQMK------------------ 248 Query: 190 SLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA 249 L + + ++ E + Q + L G +T E Sbjct: 249 -LYMVAVSFAERIESELAVSLAETDIQYICSLLLAHGIEPYMQITEKREAN-------VI 300 Query: 250 DNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 + + +++++ + ++ D L++ + H++ + + + +K + Sbjct: 301 ETTEEMIEKMSRLLDTDLTQDNLLLQALLSHIVPMIHRLKNGMLVKNPLLRLIKKQYSTM 360 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQL 366 F ++ + I L + + L + + + ++F A E+ + + +I+ S A + + Sbjct: 361 FTLTKYAIGGLEKNFALFLTEDEVSFLTIHFQLAFEKIKVTKHVLIVCSSGLATSELIFN 420 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 I++ + V+ S +L + E+ L+I + V + V + T I Sbjct: 421 RIKQTISATTVLEIISAEKLASTSLELVDLIISTVPLEEVSPPV---LYVSPLPTTEEIA 477 Query: 427 QI----------KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQH 476 I + L ++ + +F Y N + + + + ++ H Sbjct: 478 MISANLSNLNENEKKLHSSKYQSSELLQKYLDPAFLYINQPFNTKKDVLDFLAESYLSHH 537 Query: 477 HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL 536 +T D Q + ARE G + +AIPH + + + F+TL + ++ + + V+ Sbjct: 538 LVTNDFKQSLYAREELGSTGLKTGVAIPHADPQTVKTTKLAFVTLPKAIKWGDTEVQLVV 597 Query: 537 IACAAADARHELKIFSYLASILCQHPAEI--IAGLTGYEAFMELLHKG 582 + A E K L P EI + E L KG Sbjct: 598 LLAIAEKNMSEAKELIASIYDLFNSPEEIRWVVSSKNREELYRKLVKG 645 >UniRef50_C5WEK4 Putative uncharacterized protein n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WEK4_STRDG Length = 649 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 130/368 (35%), Gaps = 21/368 (5%) Query: 232 TLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWI 290 T+ + + + L++RV ++ L++ D LV+ I+ +L + Sbjct: 281 TILSVGYESFPSENQQFVQLTKQLIKRVGQLSGLDLSHDTDLVKMISNYLRPMIYRLKNG 340 Query: 291 AEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER 348 + +K + F + +L +Q + L D++ + +YF A+E+ + Sbjct: 341 INIANQTTEEIKKRYSILFHVVWLASKVLSDQYQLELLDAEIAFLTIYFEIAVEKLEPPL 400 Query: 349 QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDD 408 +I+ A + + ++ R + + ++ LSEL + +LI + Sbjct: 401 TIVIVCPHGLAASELIISSLRRLISHYDHLVTVDLSELDSSVARQADILISSIQLKDFPR 460 Query: 409 AVNNYITVKNIITAAGIEQIKHF--LATAFIRQQPE-----------RFFSAPGSFHYSN 455 Y+ V ++T ++ I+ T R+ Y + Sbjct: 461 P---YVLVSPVLTNDELDNIQKLYLDLTKGNRKVLSIVHDDYDAKQALLKDLIQHEVYLH 517 Query: 456 VRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFR 515 S + R + +++ I+ RE G + +A+PH E R + Sbjct: 518 QALTSQEDCLRFLAQHAFSENRDNPGYLTSILQREKMGSTSVYTGIALPHANPEMVGRSQ 577 Query: 516 GFFITLAQPVEVNNEVINHVLIACAAADARHE-LKIFSYLASILCQHPAEI-IAGLTGYE 573 +TL +PV + V++ + +L S + + + Sbjct: 578 LSLLTLKEPVIWGKNRVKVVMLISIKEGEEELYKEALVHLYSKIDNEAFIDSLTQTADEK 637 Query: 574 AFMELLHK 581 AF+ELL K Sbjct: 638 AFIELLLK 645 >UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ADA7_ENTCA Length = 669 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 97/665 (14%), Positives = 214/665 (32%), Gaps = 103/665 (15%) Query: 6 QLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA--SGSAGYQLEI 63 LK++ + ++A+Q GVS RT + + L L GY+L I Sbjct: 1 MLKMLYQNRNTYTSSKQIAKQLGVSDRTARKYVQGLGLILKNHKLGQICAKQGQGYRLNI 60 Query: 64 FERRSFFQLLQKHDN--------------DDR----LLALLLLNTFTPRAQLASALNLPE 105 ++RSF + + N +DR L LL LA+ L + Sbjct: 61 TDQRSFDRFYTEKTNTRPTAADLTTINEANDRQYFVLNQLLFGQKPVFVDDLAADLCVSR 120 Query: 106 TWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKD----------- 153 + ++ + +KQ + T L R G ++ +E + N + Sbjct: 121 STISNDIVEIKQLLKPYTIELKHRTSQGIYVAGSENSLRHFIMNYFFMNRLQDNLYAFSM 180 Query: 154 ---------------------------------PFLIPLAGITRDNLQHLSTACDNQHRW 180 ++ G+ LQ + Sbjct: 181 YKHLLEGIAIEEIVIIVLDTCRKYFLKLSDFMIYTIVLHIGLAIKRLQAGFEIQLHPQEA 240 Query: 181 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 L Q S + + +R Q+ P +E I H L +R L + + Sbjct: 241 NLAQEVEYQSALEIVEKIRQQMG---IVLPPEEAFYIAIHLKNKLVSETIREQIDLDDNE 297 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 +Q ++ + D L++ + H+ L + Sbjct: 298 VKQQLLVVLQKIDQ------ETGFCLAEDPLLIDGLMMHITPLLQRLNNGTSMENPLLET 351 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP--IILLSD 356 +K + F +++ + + + + + + ++ A+ER N+++ +++ + Sbjct: 352 IKKDYSDFFQLTIRHFSDVPFFAPYKVTEGELAYLTIHLTAAMERLANQQKARVLVICAT 411 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIE-PLLIINNSHYLLDDAVNNYIT 415 + + + +E ++ + +++I +S +++ LII++ +T Sbjct: 412 GIGSSQMLKNRLEHELGS-KLVIEEMISYYEISEQKLAGIDLIISSIKVPDVVLNIPIVT 470 Query: 416 VKNIITAAGIEQIKHFLAT--------AFIRQQPERFFSAPGSFHYSNVRGE-------- 459 V + I++I L + ++Q+P+ ++ R E Sbjct: 471 VSVFLDKKDIQKINRQLKQYKTKKQYRSVLKQRPKTLSDKERELIETSFRPELFLWLAEE 530 Query: 460 -SWQHITRQICAQL--VAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRG 516 + + Q+ ++ V + + +++ RE + LA+ H Sbjct: 531 TDKEAVLDQLLTRIESVEKRAVKEALGKQLALREAYSSVAFSDHLAVAHPIEPITNDAYA 590 Query: 517 FFITLAQPVEVNNEVINHVLIACAAAD---ARHELKIFSYLASILCQHPAEI-IAGLTGY 572 L Q ++ ++E LI + D KI L I+ + + + Sbjct: 591 AVAILKQGIKWDDEHDQIQLIFLLSPDRLGQVELNKISQLLVPIIEDESFKDALIASGDF 650 Query: 573 EAFME 577 E FME Sbjct: 651 EHFME 655 >UniRef50_C0CWF4 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWF4_9CLOT Length = 630 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 88/636 (13%), Positives = 193/636 (30%), Gaps = 72/636 (11%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M +Q +++ +L Q LA GVS RTI + LN + G Sbjct: 1 MKTNKQNELLRILSDASQSIPSAALAGMLGVSERTIRNYVKDLN---ESGEASILASREG 57 Query: 59 YQLEIFERRSFFQLLQKHDNDDR----LLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 Y+L+ +N+ R L LL A L + + V + Sbjct: 58 YRLQEVFGSREAA---PSENEGRVWQILSDLLTGKDGVNAFDEAERLFISASTVINTIIP 114 Query: 115 LKQRYERTCCLASRPG-LGHFIDETEEKRVILLANLLRKDP-----------FLIPLAGI 162 + R L+ ++ +E+ + L+ ++ D L P Sbjct: 115 QIKNVVREYDLSIESKNYQFYLRGSEQNKRRLIGHIATGDTYGFFNTKEALEQLFPQQD- 173 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIK------- 215 +Q L C + DY + +L + + E Sbjct: 174 VHGIMQELYNICQESK---IYLNDYSLNNLLIHILIILIRLNSDHCLGERETYISAGELL 230 Query: 216 -------QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG-------------- 254 +I+ + + + + ++ +QQ ++ A +V+ Sbjct: 231 EALYDKEEIIALADMISSNYRENYGIQIPKEDYQQILILIALSVEHEVVDIQSVISHEFI 290 Query: 255 -----LLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 +L V + + H+ + + LK + + Sbjct: 291 CNVTSILSLVSERYCTPEFENDFILQFALHVYYAYQRCTYRIGYPNPIGPQLKKDYAPVY 350 Query: 310 DMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATIN 364 DM++ F + + + + I +F LE ++ ++ I I++ ++ + Sbjct: 351 DMAVFFAHKFSKIYQVTFNEDEIAFIAFHFGAFLENNKQNKERITCAIVVESYHSFSRKL 410 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLD--DAVNNYITVKNIITA 422 I + ++++ L ++ LII+ V + Sbjct: 411 VNDISA-AFHEQLLVTDVLPVSRFLQHPPGSDLIISTLPVDTGGRHTVRVNPILTRQNQD 469 Query: 423 AGIEQIKHFLATAFIRQQPERFFSA-PGSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 + +++ A + S ++ NV +S Q + + + ++ Sbjct: 470 SIQKKLDEIGAERELLHARTFLRSLFHKELYFRNVAQDSAQAYIKFMGGHCLEHGYVKEA 529 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA 541 Q ++ RE + LA+PH S+ + + P+ N++ I+ +L+ Sbjct: 530 FIQDVLLRESVSSTAFTDTLAVPHAISQFAEQSFICVVHNNMPIRWNHKAIHFILLVGIT 589 Query: 542 ADARHELKIFSYLASILCQHPAEIIA--GLTGYEAF 575 + K L L + I +E F Sbjct: 590 QEEMKYFKSSFDLIIELFNSTSRTIELLKTNTFEEF 625 >UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G824_9ACTN Length = 470 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 130/385 (33%), Gaps = 21/385 (5%) Query: 207 PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLN 266 P +E+ I H +T+ ++ V +L RV + + Sbjct: 77 ISLPQEEVAYIAIH------LAGKQTIYQTPDESSLVISDEVWQVVSDMLDRVWRVFRFD 130 Query: 267 II-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 D +L N+ H+ + + + ++++KA +P +F +++ T++ E Sbjct: 131 FRNDLELRMNLARHIQPLSVRLRYNLKLKNPMLDDIKARYPLSFSIAVDASTVIAEAYGA 190 Query: 326 PLFDSD--LIGLYFACALERHQNERQP---IILLSDQNAIATINQLAIERDV--LNCRVI 378 PL + + L F ALER + E +++ + A + + R+ ++ Sbjct: 191 PLSHDEIGYVALAFELALERSKTETVKKNILVICASGAGSARLLEYQCRREFGDYIDQIQ 250 Query: 379 IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIR 438 +L I+ + L V V + E+ + L R Sbjct: 251 TCDALGLDKVDFSTIDYAFTTVPLNRELPVPVR---EVSCFLDPVEAERTRAVLRKEMRR 307 Query: 439 QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV 498 + ++ S + + A+ + + + + ARE Sbjct: 308 PSALGADYLGRDLFFPHLACTSKAEVLDFLIARAEESRDVAPNFRELVFAREERMPTAFG 367 Query: 499 NRLAIPHCWSEQERRFRGFFITLAQPVEVN--NEVINHVLIACAAADARHELKIF--SYL 554 N +A+PH R L +PV E + V +A + D + F S+ Sbjct: 368 NNIAMPHPLEVASRDAFVCIGLLDEPVVWGAEGEEVQAVFLAGFSFDEDGSARTFLDSFA 427 Query: 555 ASILCQHPAEIIAGLTGYEAFMELL 579 ++ E + +EAF ++L Sbjct: 428 GVLVDPQAIERLVTEQTWEAFADVL 452 >UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax=Lactobacillus plantarum RepID=C6VLU3_LACPJ Length = 634 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 83/626 (13%), Positives = 202/626 (32%), Gaps = 60/626 (9%) Query: 9 IVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQLEIFERR 67 I +L ++ ++ + TG S +TI + ++ + +N + G + + Sbjct: 15 IELILSKRIVHYQDIMEYTGTSRKTIAKYLNEVEKVVNQQGVHLVRKRGQGIRFSGNTKG 74 Query: 68 SFFQL-LQKHDNDDRLLALLLLNTFTPR-------AQLASALNLPETWVAERLPRLKQRY 119 + + K ++ + + TF + +A + + + L LK Y Sbjct: 75 LLAEFPILKDNSQSEQERRISIMTFLTQQSKPVLLDDIADHFFISRSTLERDLNVLKMDY 134 Query: 120 ERTCCL-ASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQH 178 L A+ G+ E++ +RVI LL+ + + Sbjct: 135 --GLKLTATTEGVKFNSSESDVRRVI--GQLLQSYWGQEIKQNQQTGKMTRTFKVPQSLK 190 Query: 179 RWPLMQ--------------------GDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIV 218 R+ Q +Y +L + Q + Sbjct: 191 RYVNKQTLNQMQKVLNKFVKILKVDVNEYQYESLLIHTTIAIQRIKNGEFITQTTTQNFD 250 Query: 219 EHSGLFLGDNAVRTLTGLI-----EKQHQQAQVISADNVQGLLQRVPG-----------I 262 + + V+ L +++ + A G + Sbjct: 251 TMAISPSTNKLVKMLIVAFKCEIPDEEIAYLNMHVAAIEDGYIDLDRSGLVERTIVDWLR 310 Query: 263 ASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 + L D QL+ N+T HL L N +K +P AFD +L + +Q Sbjct: 311 SVLTDYDNQLLRNLTLHLRPALVRIKNGISITNPYCNQVKTYFPVAFDQALALAMAIEKQ 370 Query: 323 LDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQLAIERDVLNCRV 377 + L + + + L+F +ER + + + I+ S A + + + + + ++ Sbjct: 371 YHLQLTEDEIAYLALHFESFIERRKVLKPDVELAIVCSTGYGTAELLKQRVMDKLPDVQI 430 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFI 437 + S++EL+ + ++ + + + + +E++ + Sbjct: 431 VGTLSVNELMTSTVTADIIISTIPLKMSGTRVIQVSPFLNDQ-ELSLLEKLSQDIRQEKY 489 Query: 438 RQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI 497 + +P +N + + Q+ +L ++ +ARE I Sbjct: 490 TRNAFVKLLSPNGII-TNSKATEKKMAIIQLTDRLEKYGYVDNQMQNSALAREQVAST-I 547 Query: 498 VNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD-ARHELKIFSYLAS 556 +++ AIPH + + +T + ++ ++E ++ V I+SY + Sbjct: 548 IDKFAIPHGDIDHVLQPTIGIMTSKKGIKWDHENVHIVFFVALNRTVETQMDDIYSYFYN 607 Query: 557 ILCQ-HPAEIIAGLTGYEAFMELLHK 581 ++ + + ++ L + Sbjct: 608 LIQDGQRMTALIKAQNAQEIIDTLAQ 633 >UniRef50_Q3XZH6 Transcriptional antiterminator bglG:Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=9 Tax=Lactobacillales RepID=Q3XZH6_ENTFC Length = 640 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 107/630 (16%), Positives = 230/630 (36%), Gaps = 64/630 (10%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAG 58 +N+RQ ++ L + T +LA+ VS RTI D++ + L K + G Sbjct: 1 MNQRQQSLIYQLSENNNYITTKKLAEHFHVSERTIHSDLNTIETWLRDKHLPLMFERKKG 60 Query: 59 YQLEI----FERRSFFQLL---QKHDNDDRLLALLLL------NTFTPRAQLASALNLPE 105 + + ER + L + + D + L LL+ +L+ L + + Sbjct: 61 TGILLNGLPHEREQLKRALNEETQTEMDKKQLRQLLIFHLLVAKDGFSLEELSEKLYVGK 120 Query: 106 TWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLR----KDPFLIPLA 160 + + L L+ +E L S+ LG F+ E+++ LL LR +DP L Sbjct: 121 RTIRKELTELQSFFEYHHLQLVSKTKLGTFLKGDEQEKRQLLVKTLRNMQKEDPQSPSLK 180 Query: 161 GI-TRDNLQHLS-TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIV 218 +D L+ + T D + L Q + L+S+ + IY + ++ + ++V Sbjct: 181 EFFAKDTLKVIQHTLQDVFYENHLEQPNGLASVEIHIYFMLERMKQYQKVKLSKDENEVV 240 Query: 219 EHSGLFLGDN----------------------AVRTLTGLIEKQH-QQAQVISADNVQGL 255 EH+ + A+R Q + Q S+ L Sbjct: 241 EHTQAQKLSSQILAKLATIYPIEFSPDEINYLALRIANLFTNSQAATRFQKESSALADHL 300 Query: 256 LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 +++V ++ D L +N+ HL + + N+ + + F + Sbjct: 301 IEQVEQFLGYSLKEDQLLKQNLRSHLSSTYFRLHYGLQISNPLTKNVFSTYTQLFLVLQL 360 Query: 315 FIT--LLREQLDIPLFDSDLIGLYFACALERHQNERQP----IILLSDQNAIATINQLAI 368 + +E +P ++ + ++F A+ERH++++ +++ A+AT + + Sbjct: 361 ILEDYFEKENFYVPQEETAYLTIHFQAAIERHKHQKSRRYQTVLVSEYSKAMATFLEARL 420 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 R++ ++ + ++ I+ I + +IT + + Sbjct: 421 NRELPELTIMDLVEYKPELKRQDFPSVDFILAT--LPFKHISIPVIEISPMITETDLAYL 478 Query: 429 KHFLATAFIRQQPERF----FSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ 484 ++ ++ + F F+ P + + I + LV H++ + Sbjct: 479 TKYMLEHVPIKKKKTFDLASFTHP-FLIFPQLERTDPADILNFMGNVLVEHHYVEPEFID 537 Query: 485 RIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA 544 ++ R+ + + IPH + T+ +PV + E I VL+ + Sbjct: 538 SVLERDSHSSTRVAPFVTIPHGNPLYVKHSMISIATMKEPVLWHGEQIRIVLLLAIKKND 597 Query: 545 ---RHELKIFSYLASILCQHPAEIIAGLTG 571 KIFS + L + P ++ + Sbjct: 598 LKHAEFKKIFS-VIHYLEKQPEQMAQLMQS 626 >UniRef50_A5ZAB6 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAB6_9FIRM Length = 631 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 123/343 (35%), Gaps = 14/343 (4%) Query: 249 ADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 + ++ +L V L I + + + H+ + I +NN+K P Sbjct: 289 IEEIREILLNVFSSYMLEINFDEYLYSFALHIHGLIKRANSIQSSGNDFLNNIKKNCPFI 348 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAI-AT 362 +D+S+ L ++ +I + DS+ I ++ +E ++ + +L D + I + Sbjct: 349 YDVSVSIAQKLNKKYNISIADSEIGYISIHIGYLIESSNSDSDKVSVLLLCHDYHHINSN 408 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVN---NYITVKNI 419 I + ++ + + + + I + ++ + + + + + + I Sbjct: 409 IEKKLLDNYQNFITLKLFTTDNRSALINAYSDLIVTTKPLNLIGKEVIVVSPFFTMMDQI 468 Query: 420 ITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHIT 479 I + FF F ++ + + + R + ++ Sbjct: 469 NVDNAIHKCLENKQKIKRNNILSSFFDEKLFFKSNDF--GNKEDVIRFLGQNVIDYGLCE 526 Query: 480 ADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIAC 539 + ++ RE + AIPH +T ++ ++ VI+ VL+ Sbjct: 527 EGFVESVLEREQLSSTCFFDTFAIPHALDMNATHTMICVLTSESGIQWDDHVIHIVLMLA 586 Query: 540 AAADARHEL-KIFSYLASILCQHPAEIIAGLTGYEAFMELLHK 581 + R + ++++ + L + E + L + M+ L++ Sbjct: 587 VQQNDRKKFMELYNGIVQTLEK--PEKVNKLVLSDNLMDFLNQ 627 >UniRef50_C1QBY4 PTS system IIA component; transcriptional antiterminator, BglG family n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBY4_9SPIR Length = 621 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 96/636 (15%), Positives = 206/636 (32%), Gaps = 75/636 (11%) Query: 1 MLNERQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-G 58 M N+ +I+ +L + T +LA++ VS +TI I LN L S G Sbjct: 1 MKNKYIKEILSILSAESYITAEKLAKELNVSEKTIRIKIQELNNDLEKTGVKIVSKPRYG 60 Query: 59 YQLEIFE------RRSFFQLLQKHDNDDRLLALLLLN--TFTPRAQLASALNLPETWVAE 110 Y L + SF + + L+ N + L+ AL++ +T + Sbjct: 61 YTLLCDDNNKDIKAISFNTVNDFEYRVKYIFEYLINNNDEYIKSDTLSEALDISKTTLTN 120 Query: 111 RLPRLKQRYER-TCCLASRPGLGHFIDETE-----------EKRVILLANLLRK--DPFL 156 L ++ + + RP G I E K+ I + K + F+ Sbjct: 121 TLKIIEDNIKYYNIKIERRPNYGIRIIGNEFDIRNCIIDYYLKQYIHDEKYINKSIEKFV 180 Query: 157 IPLAGITRDNLQHLSTA------------CDNQHRWPLMQGDYLSSLILAIYALRNQLTD 204 I L ++ D L + L NQL + Sbjct: 181 IDFIKDNDIKLSEINLENFILYILVSIERIKMGKVIDCYDKDILKDIKEEELKLANQLAE 240 Query: 205 -----EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRV 259 ++ E I H A ++L E + Q + VQ +L V Sbjct: 241 ILEKESNIKFNEAEKIFIAIHI-------ASKSLLISSENSNFIIQNKLDNIVQEILDLV 293 Query: 260 PGIASLNIIDAQLVENITGH-LLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 +++ + + + H ++ + + + ++K+ + ++ ++ T+ Sbjct: 294 YSNLKIDLRNNLNLRLLLNHHMIPLDIRIRYNVLQKNPMLCDIKSNYGLSYLIASEANTV 353 Query: 319 LREQLDIPLFDSD--LIGLYFACALERHQNERQ-PIILLSDQNAIATINQLAIER----- 370 L+ + D + + L F ALE + NE + I +L + T ++L + + Sbjct: 354 LKSYYKKEISDDEIGYLALLFQIALEENSNEEKNKINILIVCGSGKTTSKLLMYKYKKEF 413 Query: 371 -----DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI 425 ++ +I+ + ++ + ++ + + + Sbjct: 414 ADYIDNIYTTDLIMLKDFD-----FSKVNYIFSTVPINFRVPLPIVQIGLFLENTDIINV 468 Query: 426 EQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR 485 + F+ +++G S I + IC + I + Sbjct: 469 KNALELSKNDFLNDYYN------KDLFSLDIKGNSRDEIIKNICINIKKYIDIPDNFYDS 522 Query: 486 IIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADAR 545 ++ RE E N +AIPH + + + L +P+ + + + + + Sbjct: 523 VMKREDLSETDFGNLVAIPHPFDILTEKTFVYVAVLEKPIIWYKNNVQVIFLVSISNNKD 582 Query: 546 HELKIFSYLAS--ILCQHPAEIIAGLTGYEAFMELL 579 L+ F +L + + ++ M LL Sbjct: 583 DNLQKFYQYTVDFLLNEESVIKLIENKTFDNLMYLL 618 >UniRef50_A6QKC9 Transcriptional antiterminator BglG family protein n=61 Tax=Staphylococcus RepID=A6QKC9_STAAE Length = 624 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 97/629 (15%), Positives = 198/629 (31%), Gaps = 54/629 (8%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 + +R LK++ + P + E+A+ VS RT+ DI +N + G Sbjct: 1 MLDRHLKLLQFFIKNPSKHISSNEIAKHVNVSNRTVRNDIHVINSNFMDDIIVSIKS-KG 59 Query: 59 YQL--------EIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 YQL I ER + Q ++ LL+ N QL L +T + + Sbjct: 60 YQLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQTLQQLEQDYLLSKTVLND 119 Query: 111 RLPRLKQRYER-TCCLASRPGLGHFIDET-----------------EEKRVILLANLLRK 152 R++Q ++ L + G +D T L+ N L Sbjct: 120 YFVRIQQWCQKFNIALTIKKKQGIVVDGTDNDITNAIIHLNQLSSGHVHVEDLILNELPD 179 Query: 153 DPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGD 212 + ++ I ++ LQ S + L+ L + + L + Sbjct: 180 SHQRM-ISHIIQETLQQHSIETTDIQIQQLLIHLILIIKRKQSLSELDTLNHDSKLISQS 238 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ------QAQVISADNVQGLLQRVPGIASLN 266 IKQI E G + + V + H ++ + L++ + + Sbjct: 239 CIKQINERLG-YDLNEKVINMFSFFIAYHFNKLDIGIERIFIQSYIDRLIELMQQRIHVP 297 Query: 267 IIDAQLVE-NITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 + +++ N+ H + + +K +P F+ I L DI Sbjct: 298 FNEDSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIKKLYPFVFNTLFEAIDKLAIDTDI 357 Query: 326 PLFDSD--LIGLYFACALERH-QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARS 382 + + + + ++F A+ER + + +I ++ + I L+ + + + Sbjct: 358 EMSEDEIAFLTIHFQAAIERRTKTQLNVVIACYYGLGVSNFLETKINN--LSEELSVINT 415 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNY------ITVKNIITAAGIEQIKHFLATAF 436 + + + ++ +H + +N I V + + +I+H + Sbjct: 416 IKLENITHYHFDNVDLLITTHDIPKQTLNILPKHLTTIKVAPLFSEDDRHKIRHVVKQKQ 475 Query: 437 IRQQPERFFSAPGSFHY-SNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 Q + + I + L A H I + + RE Sbjct: 476 NPVQAHHHMDTVNFLVVNTEQKSRHTVQIFEEAQKILQAHHAIVEGYIESALEREKSSST 535 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLA 555 I N +AIPH E+ + + V + + K L Sbjct: 536 YIGNFMAIPHGDPEKVLQSHVLIFRTKDVFPWRQHDVKLVFFLAISHKDKAFTKQMMQLI 595 Query: 556 SILCQHPAEIIAGLTGY---EAFMELLHK 581 + L + L + + E L + Sbjct: 596 ANLDDDSVNHLCSLDDHSLKQQLFEYLQE 624 >UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS system IIA component n=8 Tax=Streptococcus RepID=B4U3Q3_STREM Length = 665 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 101/668 (15%), Positives = 207/668 (30%), Gaps = 99/668 (14%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGS- 56 ML+++++ IV L Q + LA+ G S RT+ + + L +L K S Sbjct: 2 MLSKKEMAIVAFLISQKGQFVSSATLAKAIGRSDRTVRKYLKELISSLPSKGAHIISKQG 61 Query: 57 AGYQLEIFERRSFFQLLQKH-----------------DNDDRLL-ALLLLNTFTPRAQLA 98 GY LEI +F Q+ D + LL +L Sbjct: 62 QGYCLEIDHSMAFEIFWQESLASKKRLADVTQVEETVDREHYLLNKFFFEEPVWDFEELC 121 Query: 99 SALNLPETWVAERLPRLK---QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF 155 L + T + L ++ + Y+ ++ + + EE + + F Sbjct: 122 QELYISRTTLNHVLAVIRDRIRPYQLQLDVSHQR---VQVTGKEEAIRHFIMDYFFATSF 178 Query: 156 LIPLAGITRDN-LQHLS------TACDNQHRWPLMQGDY-LSSLILAIYALRNQLTDEWP 207 + I + L H+ D L D+ + +L+L I + ++ +P Sbjct: 179 DDSMYAIVDNTFLDHIKFADITIIVLDECRDAKLKLSDFVMHNLVLHIALMVQRIRSGYP 238 Query: 208 --------------------------------QYPGDEIKQIVEHSGLFLGDNAVRTLTG 235 ++P +E I H + + Sbjct: 239 LAFFSIPAAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVDGSPQDN- 297 Query: 236 LIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQ 295 + + A V+ SL D+ L++ + H+ + Sbjct: 298 --KADDLLRSHLKAGIVK---ASQLTGMSLEA-DSSLLQGLLAHMKPLATRLENHIQLTN 351 Query: 296 SSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN-ERQPII 352 +K+ +P AF ++ + E L D + I L+ A+ER+ N + ++ Sbjct: 352 PLTEEIKSKYPEAFALTKQAFENIPELQAYDLSDDEWAYISLHVMAAIERYSNRHKLRVL 411 Query: 353 LLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPL-LIINNSHYLLDDAVN 411 ++ + + R I +S +E ++ + +II++ + Sbjct: 412 VVCATGYGSAMMLKNRLEKEFEGRFQIVDVISYYEITQERLQTVDVIISSISLANVMFLT 471 Query: 412 NYITVKNIITAAGIEQIKHFLATAF----------------IRQQPERFFSAPGSFHYSN 455 ITV ++ I+ I+ F+ Q + FS + Sbjct: 472 PVITVSVFLSDQDIKAIRQFIGEQEGIRREAASSSQMSLEKAEQILKGIFSPKRFLYVKE 531 Query: 456 VRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFR 515 + + C +I+ RE + LA PH + + Sbjct: 532 KLSKKALLLKMIACLDEAMDEAFVEAFYHQIVLRENYSSIVFGEVLAFPHPANPMTYSEQ 591 Query: 516 GFFITLAQPVEVN--NEVINHVLIACAAADARHELKIFS-YLASILCQ-HPAEIIAGLTG 571 +P++ + + ++ + + + LK S L S + Q + + Sbjct: 592 VVVAVCQEPIDWDESHRAVHFIFLLSPSKGRNSYLKYISPSLVSFVNQAELQQALLEEPS 651 Query: 572 YEAFMELL 579 Y F+ L Sbjct: 652 YAQFITLF 659 >UniRef50_Q18CM3 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=Q18CM3_CLOD6 Length = 637 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 94/635 (14%), Positives = 217/635 (34%), Gaps = 59/635 (9%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 LN+RQ ++ L +++ ++A S RTI D Y++ L+ + Sbjct: 4 LNKRQENLLTTLLLKEEFINVNKIANDFECSERTIRNDCKYIDEWLSTFCNAYIKRKPNI 63 Query: 60 QLEIFERRSFFQLLQK-------------HDNDDRLLALLLLNTFTPRAQLASALNLPET 106 ++ + L+ + H + L LL N L++ L + + Sbjct: 64 GIKFSGDGTDKILVNQKLRGEVKRVNSELHKQVEILNLLLCNNKKVTLNDLSNKLYINKN 123 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRK--DPFLIPLAGIT 163 V E + +L ++++ G G +I+ E+ I+L + L K D + + + I Sbjct: 124 IVREEISKLSVALNNYNLNISTKKGSGIYIEGDEKDIRIMLVSFLFKYIDKYRLNIDEIE 183 Query: 164 RDNLQHLSTACDNQHRWPLMQGDYLSSL-------ILAIYALRNQLTDEWPQYPGDEIKQ 216 ++ + + L+ + L I +R +L + + + Sbjct: 184 YFHIVDIIIVKNIMLTIEEDMDIRLTDISFKQLMLFLLINIIRIRLGNSLKVSNTKKELK 243 Query: 217 IV---------EHSGLFLGDNAVRTLT--GLIEKQHQQAQVISADN-----------VQG 254 + S L + N L LI ++Q + + Sbjct: 244 LKMLILDIEDELKSNLSIVLNYEEKLFIESLILGMNKQINSNNIKKSLYLNEELASYTKK 303 Query: 255 LLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 ++ V + +N D L E + HL + ++N+K + F + Sbjct: 304 IINLVSEESGINFNNDILLYEQLICHLNVTMHQMKSNVYLENPLLDNIKTKFCFLFTVIS 363 Query: 314 HFITLLREQLDIPLFDSDLIGLYFACALER----HQNERQPIILLSDQNAIATINQLAIE 369 I + + I + + L+F +LER ++ ++ I+ ++ + ++ IE Sbjct: 364 SSIEIELKGKQITEGEIGYLTLHFQTSLERKYSKRESNKKASIVCPFSFGVSMLLKVKIE 423 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 + N ++I +L E R+ + + ++ + T ++K Sbjct: 424 KRFDNIKII--ETLREEDLKRDNFNKTIDFIIAFQEYENIQKPIFITTPLFTDEDENKLK 481 Query: 430 HFLATAFIRQQPERF--FSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 F + + + + + + L+ +H+ + Q II Sbjct: 482 EFTNKIKEKDTSYKLMNRLMMSDYLIRELEHDDIYEAITYLTNLLIEKHYAEKEYLQSII 541 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARH 546 RE + + PH + ++ F L P+++ N + I +L+ D Sbjct: 542 TREKSYPTNVGKGILFPHGDMKYIKQSVLCFARLKTPIKIRNGKDIKIILLLAYKKDDDR 601 Query: 547 EL--KIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 ++ ++F ++++ I E ++L Sbjct: 602 KVFRELFKEISNLTEDENMLDILSKCDIEKVKDIL 636 >UniRef50_C5ERF8 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERF8_9FIRM Length = 633 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 90/612 (14%), Positives = 203/612 (33%), Gaps = 70/612 (11%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 L +RQ + + LL + P T E+A +TGVS RT+ D+ LN L S AG Sbjct: 3 LMKRQKQYLHLLMDREGPVTSREMALETGVSLRTVKTDMAKLNELLKDYDMRIMSKPGAG 62 Query: 59 YQL-----EIFERRSFFQLLQKHDNDDRLL------------ALLLLNTFTPRAQLASAL 101 Y+L E + S +++ DR+ LL L+ + +L L Sbjct: 63 YRLASNDGEGLKPLSLLMEQMQYERSDRIPDTGPERVEYIAGKLLALDYYITMEELRQIL 122 Query: 102 NLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEK-RVILLANLLRKDP--FLI 157 + + + + + ++++ E + G + TE R + R + Sbjct: 123 YVSRSTLNQDMRQVRRLLELYGLKVVHASHKGIRLQGTETALRRCMAELFFRNEGKWEKT 182 Query: 158 PLAGITRDNLQHLSTACDNQHRW--PLMQGDYLSSLILAIYALRN--------------Q 201 P G + + + ++ + L L IY Q Sbjct: 183 PGTGPGEERISQIQHILKSRADALCVSYPEAVVRELALQIYIAAQRCRFRKEVEFDSSLQ 242 Query: 202 LTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN-----VQGLL 256 ++ ++ + E G+ + D + + +++ + + + D+ ++ + Sbjct: 243 VSRQFMDMAVSIGDGLRETMGISMPDIEIHNMACMLQFRSLEEETGPEDDRFDGVIRRMF 302 Query: 257 QRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 QR+ L + L + HL R +N+ +P A D++ Sbjct: 303 QRIEEKFGLRFSGQEQLAHYLKLHLPRMAQRCRNRILIENPVLNDTFCNYPLAVDVANVA 362 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILL----SDQNAIATINQLAIE 369 + +L ++LDI + ++ + +YF + + + ++L S ++ +L Sbjct: 363 VQVLEQELDIKVNSNEFGYLAVYFNMCIVTYGERQNKTLILVCPGSRAESVMYFTELQAL 422 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYL------LDDAVNNYITVKNIITAA 423 ++ R E ++ H+L + N + +I+ A Sbjct: 423 FGNYVNTLLTCRVDELKSMKFTGNEVIVSTVPLHFLPGYVRWIHTGCNIVESFSDIMEAL 482 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEA 483 ++ F F+ S + ++ + L + EA Sbjct: 483 TSLPLESFNIDEFM----------DPSLWVTGAEADTPDTYFEYLFDTLCEMQMMDFGEA 532 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD 543 + + + N++A+ + F +P + + ++ + Sbjct: 533 RILYENVERFGQELGNQVALIRAENPFLTPF-VHVTFTKEPFLWERQYVKVIIFMNVSDG 591 Query: 544 A-RHELKIFSYL 554 + I+S+L Sbjct: 592 SYEFRNGIYSFL 603 >UniRef50_C7TG26 PTS system, IIAB component n=2 Tax=Lactobacillus rhamnosus RepID=C7TG26_LACRL Length = 644 Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 97/646 (15%), Positives = 203/646 (31%), Gaps = 73/646 (11%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 M +++ L + LL+ ++A TG+S RTI ++ L+ L Sbjct: 1 MKDKKLLILEFLLQHGTVHYDQIAAATGLSERTIGNYLNRLDGELRPYNVKLV-RKRNVG 59 Query: 61 LEIFERRSFFQLLQKHDNDDR------------LLALLLLNTFTPRAQLASALNLPETWV 108 + + L + + ++ LLL ++LA L + + Sbjct: 60 IRLDGPADQKAHLLRSVHGQEGFASQSARVHYLMIKLLLTTRPCTLSKLADDLFVSRRTI 119 Query: 109 AERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKD--------------- 153 +KQ + + G + +E R +LA LLR+ Sbjct: 120 DNDFKVVKQIFAQNQVTVHTSRRGIQVTASEANRRHMLAKLLRQYWGESLYIAKQKDGEV 179 Query: 154 -------PFLIPLAGITRDN--LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRN---- 200 +L L +Q L+ DY + + Sbjct: 180 VQQIQLPHYLNHLVNPATTKAVMQSLTEFLKQSSLI---FSDYALQSLAIHLIIACERPK 236 Query: 201 --QLTDEWPQYPGDEIKQIVEHSGLFLGD-----NAVRTLTGLIEKQHQQAQVISADNVQ 253 Q T E KQ++ ++ NA + + +Q A +++ Sbjct: 237 KEQPTAIHLTPMLPETKQLLALVSKYVHQTLDAANAQQINAHIAALVDRQVSGAPAASIE 296 Query: 254 -----GLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 L +++ + D +L+E+++ HL L +K +P A Sbjct: 297 DQTTPELRRQIASWLTQISPDKRLLEDLSVHLSGALVRVAHGMSIPNPYTEEIKRNFPMA 356 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ--PIILLSDQNAIATIN 364 FD + + + + L D + + L+F ER Q + +++ S + + Sbjct: 357 FDAAAQLSMTVAKHYHVQLNDDESGFLALHFESFFERQQVADRISTVVVCSSGVGTSRLL 416 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 +E +++I R++ +R I LII+ + +TV ++ Sbjct: 417 AQRLEER-FREKLVITRTIGLAELMRHAIPESLIISTVP--IQGMRQPVVTVNPLLLQHD 473 Query: 425 IEQIKHFLATAFIRQQPERFF-SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADE- 482 +E++ + + F + N+ + + +L Sbjct: 474 VEKVSQQADRFCFGTEGDAFLGLLEPALIVPNLPSTDRETALSTLIQRLTQAGVFEDASL 533 Query: 483 -AQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA 541 + RE + +A+PH E RR ++ + + + Sbjct: 534 PLKLAEDREKLATTAMG-LVAMPHISPEMVRRPAIALGLAPDGLDWAGQKVKVIFFLAVT 592 Query: 542 A----DARHELKIFSYLA--SILCQHPAEIIAGLTGYEAFMELLHK 581 A D R ++ + L C+ A+ + +A E +HK Sbjct: 593 ATVPGDQRGIYQVINRLIDDQRFCEVLAQSQSTTEAVKALAEYIHK 638 >UniRef50_C0CZN4 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZN4_9CLOT Length = 339 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 119/326 (36%), Gaps = 12/326 (3%) Query: 265 LNIIDAQLV-ENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 L+ L+ + + + + E + ++K +PA F +++ ++ Sbjct: 14 LDFTGDTLLRQTLNWYHRSSALRCRYGIELENPFLEDVKKTYPAVFSACFAAGSVIYPRV 73 Query: 324 ---DIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIA 380 ++ + + L A+ R + + +++ + + I + RD L +I+ Sbjct: 74 TGEELSENEVSYLSLLIGGAIVRSEKKISAVVICNGGVGTSQILARKL-RDRLPQLMILG 132 Query: 381 RSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ 440 SE V + P L+I + + + + ++ ++ + A + + + Sbjct: 133 IFGSEQVREAARLRPQLVITTVS-GIQTPCPS-VLISPVLGERDLKLLNRACAEVYTKAE 190 Query: 441 PERFFSA---PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI 497 R A + +G + R + L + ++T + ++ARE G + Sbjct: 191 TCRNGLAGLLDEDLIVLDYQGRDKDQVLRFMAEGLEQKGYVTEQFLEDVMARESRGSTAL 250 Query: 498 VNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY-LAS 556 +AIPH S R + L + ++ E ++ + + + F Sbjct: 251 GFGVAIPHGVSGYVNRPAVSVVRLEESMDWAGEPVSLIFMLALNFKDIESTRAFFNGFYH 310 Query: 557 ILCQ-HPAEIIAGLTGYEAFMELLHK 581 + C+ E++ G+T + ++ + Sbjct: 311 LTCEVKIVELLRGVTSPGELIRVISE 336 >UniRef50_C0CVJ7 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVJ7_9CLOT Length = 360 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 107/349 (30%), Gaps = 13/349 (3%) Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 Q + + + ++++V +N T HL + + Sbjct: 5 KQYVEQEYIEAARYIVEQVKEHYLVNGFSDDFFVKFTLHLKNLFIRSSKNLTAKNPLKDK 64 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQN 358 +K +P D+S+ +L + + + + + I + L E + Sbjct: 65 IKWTYPLIHDISVFIADILDHRFGLHIDEDEIGYIAFHLCTCLYGMNQEPVTATFIYANY 124 Query: 359 AIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV-- 416 + + + + ++S I LII+ L Sbjct: 125 YDYHQKTVELLEKYFEGSLAVKFTVSIHDYIPTACHSDLIISTVGSRLPKPCIVINPFPL 184 Query: 417 --KNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVA 474 +E+I AF Q+ +FF+ N ++ Q + R +C + Sbjct: 185 KQDFEQIRNQVEEISRLKKYAFFHQKFLQFFAPQCFI--CNRTDQNPQDLIRTMCRNAID 242 Query: 475 QHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE--VI 532 Q ++ RE + +A+PH S+ R PV + + Sbjct: 243 LGFARETFTQEVLRRERMSNTAF-HEVAVPHAMSQHVNRSFISVSVNRPPVRWSESAPAV 301 Query: 533 NHVLIACAAADARHEL-KIFSYLASILCQHPA-EIIAGLTGYEAFMELL 579 VL+ D R +IF +L IL ++ +E F L+ Sbjct: 302 KLVLMIGVHQDDRRIFSRIFDFLVEILSAAGNVALLEKAASFEEFTGLI 350 >UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAW7_9FIRM Length = 642 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 86/633 (13%), Positives = 222/633 (35%), Gaps = 59/633 (9%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTL--NGKARIFASG 55 MLN+RQ++I+ T A++ VS RT+ D+ + L A + + Sbjct: 1 MLNQRQIEILLEFCNHSDEFLTASHFAKKLDVSLRTVQGDMKVIRKELADETCAELVSKA 60 Query: 56 SAGYQLEIFERRSFFQLLQK----------HDNDDRLLALLLL----NTFTPRAQLASAL 101 S G +++ F + + R+ +LLL + +L L Sbjct: 61 SKGSCIQVKNYDEFSAFVNSLYQQYTTVSLNYPTSRISKILLLLLNRHRAVSVMELEDKL 120 Query: 102 NLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEE-KRVILLA-----NLLRKDPF 155 + + + L ++++ E+ + ID E KR L ++ + Sbjct: 121 YISRSTLQNDLKKVEEVLEKFQLELLKSSNKVMIDGYEINKRRCLAEQDLYLAHIKNEQG 180 Query: 156 LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGD--- 212 ++ + ++++ T +++ +M D+ ++ IL + + ++ + + PG+ Sbjct: 181 MVYIDERQLAKIKNILTDIFVNYKYHIMDTDF-NNAILFLNIMICRMGEGFYIQPGELDI 239 Query: 213 --------EIKQ-----IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN-----VQG 254 EI + I + + D +R + ++ Q + + Sbjct: 240 SEQLGNEYEIAKAVFGKISRRFFIKVPDEEIRYFSLYLKGQGNNRDSDTITQEMDNFISE 299 Query: 255 LLQRVPGIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 + + ++ D L + H + + + + +N ++ +P +D+ Sbjct: 300 AFEEIRRNFGVDFTDNINLRITLALHCMSLSIRIKYDMQVKNDMLNYIRETFPLGYDIGA 359 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALERHQNER--QPIILLSDQNAIATINQLAIE 369 +F LL +Q + + + L+ ++F +L + + + I+++S T+ Sbjct: 360 YFAFLLHQQYGKRVSEDEVALLAVHFYSSLLELNSRQGNKRILVISALKNSMTLLMKQTL 419 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 + V + ++ + + ++ I + + V IK Sbjct: 420 LKWFSEYVSVIDFVNPMDVTEDMLDEYDIFLTTEKEEFFEKGLAMYVDTFPNQHDYMNIK 479 Query: 430 HFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 + + F +S+V+ + + + +C + A + +Q ++ R Sbjct: 480 LNIDGFKDIEDVADIFHPEL---FSSVKSSNKEEVLSMLCEKSTAYFQVENLHSQ-VLQR 535 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV--INHVLIACAAADARHE 547 E G ++A+PH +P+ + E ++ V++ + Sbjct: 536 EEIGSTFFSKQIAVPHPMYAVSSDTFVAVCVSKEPIIWDEEKNEVHLVMLMHIGKNNPQA 595 Query: 548 LKIFSYLASILCQHP-AEIIAGLTGYEAFMELL 579 +++ Y + + E + Y F+ L+ Sbjct: 596 FQLWDYFSKMFADKSLVERLVEDPSYPNFIRLV 628 >UniRef50_C7WZJ5 Predicted protein n=7 Tax=Enterococcus RepID=C7WZJ5_ENTFA Length = 650 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 83/648 (12%), Positives = 208/648 (32%), Gaps = 70/648 (10%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLN-------------FTLN 46 +NERQ+K+ LL + +++ VS +T+ +D++ L +L Sbjct: 4 MNERQIKLARLLIEHDKFLPASFYSKKLSVSTKTVFQDLETLRLFIQPYSVEIERLPSLG 63 Query: 47 GKARIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 S + + E+ S QL + + ++ LA + +T Sbjct: 64 IHLSGEHSAKSNFLKELESELSQDQLSPVNRRVKIIQSVFFEEDNPTLESLAEQYLVSKT 123 Query: 107 WVAERLPRLKQRY-ERTCCL-ASRPGLGHFIDETEEKR-----VILLANLLRKDPFLIPL 159 + L + + + ++ GL E E + V +NL+ + L Sbjct: 124 SLYNDLKIINEIIVSNGIEIISNNDGLTSQGAENEIQLAIKQLVTHFSNLIEEKSVNAKL 183 Query: 160 AGITRDNLQHL--STACDNQHRWPLMQGDYLSSLILAIYALRNQLT--------DEWPQY 209 L + N DY +L ++ + ++ + Sbjct: 184 YHFFEKQLVDIVSKILHKNFRELTENVSDYYMESLLTTLLVQCRRIQMGYHVEGEDDYLF 243 Query: 210 PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH-----QQAQVIS-----------ADNVQ 253 + + + T+ E Q D V Sbjct: 244 SSIRYMETFVVANDMSERLSQETVLNFSEADKDYLSRQLFAHRVTTEVKASDEKYVDLVY 303 Query: 254 GLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 L+ R+ I +++ D L ++ H+ + + N++ + F + Sbjct: 304 RLISRMSKIEKIDLTQDEHLFNSLLYHIPAMILRLKRGIHIENPLLENIRDQYSELFSIV 363 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIER 370 + + ++ +Q ++ L D + I ++F AL+R +I+ + A + + Sbjct: 364 WYALVIVEQQYNVILNDDEISFILIHFQIALDRQSKASNIVIICQYGMSSAQFIYSKVRK 423 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 + + +L +E L+I + ++ V +++ +I Sbjct: 424 FIPAHDNVEISTLERFNKSDKENIDLIISSIDIPQSKTP---FVKVTPLVSNQDYIKIME 480 Query: 431 FLATAFIRQQP-------ERFFSAPGSFHYSNVRGESWQHI-------TRQICAQLVAQH 476 I+ P +R F Y N++ S Q++ + +L + Sbjct: 481 AYTKYLIQGAPFGLSDSLDRNFEVDVLSKYVNLKLISLQNLFSDKADCLNSMIDELEKRK 540 Query: 477 HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL 536 + + + RE G + + +A+PH + + ++L + + + + ++ Sbjct: 541 LVLPTFRKSVFEREDIGNTNLESGVALPHADPTTILKSHIYIVSLKKSINWGDRTVKLII 600 Query: 537 IACAAADARHELK-IFSYLASILCQHPAEI-IAGLTGYEAFMELLHKG 582 + + + E++ + L + + + + +++ G Sbjct: 601 MVNLSEEDLQEIREVVEELYQFIDEKKKVDALVKVNDSVQMLQIFSTG 648 >UniRef50_C3RJI5 Transcriptional antiterminator n=2 Tax=Bacteria RepID=C3RJI5_9MOLU Length = 638 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 87/641 (13%), Positives = 208/641 (32%), Gaps = 78/641 (12%) Query: 5 RQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 +Q ++++ L T L++ +S RTI I LN + +S + GY Sbjct: 4 KQEELINYLYTHNEKVTANILSKALNLSIRTIKSYIAELNMNYPS---LISSSNRGY--- 57 Query: 63 IFERRSFFQLLQKHDN-----DDR----LLALLLL-NTFTPRAQLASALNLPETWVAERL 112 + ++ LLQ D+ + R + LL + L L + + + + + Sbjct: 58 VIDKVKANSLLQYKDDIPQDYESRCIYIIKKTLLEKQDYIDIFDLCEELFISYSTLKKDI 117 Query: 113 PRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRK-------DPFLIPLAGITRD 165 ++ + S + +E+ + L+++++ + + L+ + D Sbjct: 118 YKMNTSFANFKITFSSENNKLHVGGSEQNKRKLISHVMSEEVSGNFLNLTLLQESFPDYD 177 Query: 166 NLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT---------------------- 203 L AC YL+ + L + Sbjct: 178 ----LDDACTLIKDICKQHHYYLNDFSCVNFILHVTIMVSRINHGNHIINNNELIQVTNK 233 Query: 204 -----DEWPQYPGDEIKQIVEHSGLFL--GDNAVRTLTGLIEKQHQQAQVISADNVQG-- 254 + +++ + +S L + + + ++S + +Q Sbjct: 234 NDEKIAKELCLALEQVFNVSFNSSEILEIYILFKNNANYINNENENVSLLVSDEIIQITK 293 Query: 255 -LLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 +++ V +N+ + HL + + ++++K + P +D+S Sbjct: 294 NIIKNVDEHFFINLDSDNFITPFMLHLKNLKNRLIKNNLLKNPMLDSIKISCPTIYDIST 353 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQLAI 368 L + + + I L+ +ER + E + +L + I + I Sbjct: 354 FIAYQLTLSFHENVNEDEIAFIALHVGTEIERQKKEETKVSCLLLCPEYLNITSTLHKKI 413 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINN-----SHYLLDDAVNNYITVKNIITAA 423 D ++ I +S+S I LLI ++Y ++ + Sbjct: 414 MMD-FGDQLTIQKSISFENEILGNNFDLLITTVPVLESTNYFTVLLPPFPMSYEKNKILD 472 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEA 483 I +I++ + + F+ F+ N S + ++ +++ ++ + Sbjct: 473 AIIRIENTKKSQILTNNLN-FYFNEKLFYSMNEDI-SKSAVINELAERMINLGYVEENFK 530 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV-INHVLIACAAA 542 + I RE +N +AIPH + + + ++ N+ +N V + Sbjct: 531 EEIWKRETASSTAFMN-IAIPHPMKMSAYKTSIGVVISHKGIDWGNQHFVNVVFMIAFNK 589 Query: 543 DARHELKIFSYLASILCQHPAEI--IAGLTGYEAFMELLHK 581 +L P I I + F +++ K Sbjct: 590 IDNKHFHALYESLVLLFNEPIVISEIKKCKNFNDFKDIVIK 630 >UniRef50_B0MAU3 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAU3_9FIRM Length = 657 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 86/650 (13%), Positives = 206/650 (31%), Gaps = 77/650 (11%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-S 56 ML++ KI+ +L Q T +A +S R++ + Sbjct: 1 MLSKTASKIMRVLIHQDDEFITYERIAGMLEISERSVHNYMKEAAEFCEENGYRLVRRRG 60 Query: 57 AGYQLEI-FERRSFFQLLQKHDNDDR--------LLALLLLN-TFTPRAQLASALNLPET 106 G L+ R+ L K ++ L+ N + A L + ++ Sbjct: 61 KGVCLQAGLHRKELEHLFPKDQIPCETRKYRMCYIIRTLIENGEPYTGSLFAEELFVSKS 120 Query: 107 WVAERLPRLKQRYE-RTCCLASRPGLGHFIDETE--EKRVILLAN---LLRKDP------ 154 + + + + E C+ G G I E ++V++ N L + P Sbjct: 121 TICTDIEKANKMLEPDRVCIRRIVGKGIIIQGREFDLRKVLVCQNQKVYLEEVPKSAAVP 180 Query: 155 -------FLIPLAGITRDNLQHLSTACDNQ--HRWPLMQGDY------------------ 187 R + AC Q + DY Sbjct: 181 DYRIDPVTYARFLSQYRKSTADKVIACIQQLERQIGTQFNDYTFCMLAEYTSSQMNRLRG 240 Query: 188 ---LSSLILAIYALRNQLTD--------EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGL 236 L +++ L ++ D Q+ + + + L L V+ + + Sbjct: 241 GHCLEESMISRLTLVEEIADWTDIFTGLLNRQFRMNIDPREGLYLYLLLLGAEVQNSSRI 300 Query: 237 IEKQHQQAQVISADNV-QGLLQRVPGIASLNIIDAQLVE-NITGHLLRCLAAPVWIAEHR 294 + K+ + I ++ Q ++Q + I + + L++ + L + E + Sbjct: 301 VNKKFLIEKEIDIEDAAQNMIQYISSIVGRDFREDPLLKTSTALFLNSSFIRVKFGFEIK 360 Query: 295 QSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPII 352 ++ +K + A F + + + + + F A+ +++ + ++ Sbjct: 361 NPFLDEIKRTYSAIFSACFTASKEYESLVGAFPTEDEISYMAILFGGAMVQNKRDINTVV 420 Query: 353 LLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNN 412 + S IA I IE +++ V + V I E L+I + Sbjct: 421 IGSGGVGIAQIIARKIEHKIMDINVTSVLPANAGVMIDESQYDLVITTVPSLKIKHPYVV 480 Query: 413 YITVKNIITAAGIEQIKHFLAT-AFIRQQPERFFSAPG----SFHYSNVRGESWQHITRQ 467 Y T ++ + +IK ++ E+ ++ + + + + + Sbjct: 481 YTT--PLVGEQDVFRIKKVCHEMKEKKKNLEKRWTIKNLMEDELIFLESGTMTKKALLHK 538 Query: 468 ICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV 527 +C +L ++ + ++ RE +++ +A+PH + + I VE Sbjct: 539 VCRKLKDGGYVKDGFYEDVLRREEISASVLGGGVAVPHGMANLVEKPAVAIIKTDHKVEW 598 Query: 528 NNEVINHVLIACAAADARHELKIFSYLA--SILCQHPAEIIAGLTGYEAF 575 + ++ + + + + F + ++ A++I E Sbjct: 599 DEGSVDVIFLLALNFEDIQSTRAFFETFYEMTMEKNAAKLIRKAGSKEEI 648 >UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLZ0_CLODC Length = 661 Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 90/662 (13%), Positives = 226/662 (34%), Gaps = 90/662 (13%) Query: 2 LNERQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG-Y 59 ++ R I++++ ++ T + + GVS RTI I+ +N L G G Y Sbjct: 6 MDPRVFLILEMVLEEDTNTLEQFSNVLGVSTRTIRNYINQINRELKGGIAKIVKNEKGTY 65 Query: 60 QLEI-----------FERRSFFQLLQKHDNDDRLLALL----LLNTFTPRAQLASALNLP 104 + I F R + + D+R+ +L + N LA + + Sbjct: 66 SIRIEDESKLIEIVNFNRGKLSNFINLNSPDERINYVLDILTMTNNPITIDDLAEEICIG 125 Query: 105 ETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGI 162 T + + L + + L +P +G + E R+++L L ++ Sbjct: 126 RTTLIKDLKKADRILAEYDLELKRKPNIGMILVGEEMDIRLLILDRLYENYIDVLENVNQ 185 Query: 163 TRDNLQHLSTAC--DNQHRWPLMQGDYLSSLILA-------IYALRN-------QLTDEW 206 + ++ C D + + Y++ +L + LRN ++ + Sbjct: 186 I-NLVKDYDIECLRDELKKLFKKEELYITEQVLRDVERYIIMSVLRNLNGYKFEKIDKRF 244 Query: 207 PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA----------------- 249 + + L + ++ ++ + Sbjct: 245 EVIRCSDEYTLGLKLKALL----EKIFNIVLNEKETIFLTMPLIGRKAPSTKLALSSIKI 300 Query: 250 -DNVQGLLQRVPGIAS----LNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKA 303 D+V+ ++ V ++ D +L+EN+ HL L + + + +K Sbjct: 301 NDSVKEVVDEVTSFLLETSGIDFKEDKKLIENLEYHLYFALNRMRFNIRVKNPLLQEIKE 360 Query: 304 AWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE----RQPIILLSDQ 357 + + ++ ++ E+ D+ + D + I L+F E++ + + ++ Sbjct: 361 RYTFPYSVAKIAAMIIEEKFDLKICDHEIGYIALHFGSYFEKNSRKVLNVNRVAVVCGTG 420 Query: 358 NAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVK 417 A + ++ I +L V + + S++ A + ++ L + +D + + + Sbjct: 421 LGTAQLIRIKI-GKILGESVEV-NTFSDIEA-KANLDLLKYYDLVFTTVDFKTDLDVPIF 477 Query: 418 NIITAAGIEQIKHFLATAFIRQQP---ERFFSAPGSFHYSNVRGESWQHIT--------- 465 + E IK + A + + + + + E + Sbjct: 478 RVNALFNEESIKKEIENAILLKNSINLKSIKKIEKNIPFIGKLIEEDKFFILNKSTFMEN 537 Query: 466 -RQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP 524 + +LV + I + ++++ RE + + N +A+PH + F L +P Sbjct: 538 LEDMLEKLVHKGIIDIEFKKKVLKREKKSSTALDNYIALPHSVNTNGENLYLSFGILEKP 597 Query: 525 VEVNNEVINHVLIACAAADARHELKIFSYLASILCQ-----HPAEIIAGLTGYEAFMELL 579 V + + I +++ + + + E +A + ++ F +++ Sbjct: 598 VVWDTKEIRIIILMIIPDKNVDSTDLIIKSYEEVLEVGRDKKMIEELAKVKSFDEFYKII 657 Query: 580 HK 581 K Sbjct: 658 TK 659 >UniRef50_A8RA27 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RA27_9FIRM Length = 638 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 105/637 (16%), Positives = 216/637 (33%), Gaps = 64/637 (10%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNF-TLNGKARIFASGS 56 ML +RQ+ I+ + Q + + VS RT+ D+ + TL K Sbjct: 1 MLIKRQISILLEMSNQVGEYYKANHFSDKFNVSLRTVQNDLKAIKEETLMYKNDFIIESK 60 Query: 57 A--GYQLEIFERRSFFQLLQK----------HDNDDRLLALLL----LNTFTPRAQLASA 100 G ++ + F Q + +D DDR+ LL + A Sbjct: 61 VPFGTRIIVMHNEKFKQFINDLKLQSDEFNTNDRDDRIYKLLNFLLDQRKSISITKCADY 120 Query: 101 LNLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPL 159 + + ++ + L L+ + + L G +KR+ L+ N ++P Sbjct: 121 IFVSKSTLMLDLKELETIISKYSLRLIQSKGYLWIDGLERDKRICLMDNNY-AYLSVLPT 179 Query: 160 AGITRDNLQHLSTA--------CDNQHRWPLMQGDYL--------SSLILAIYALRNQLT 203 IT H+S Q+ ++ L + Y + Sbjct: 180 NLITGSETGHISFIHNLLINELLHKQYPISDVEFQNLILWLNISIRRIGSFFYLNEEDIN 239 Query: 204 DEWPQYPGDEIKQ-----IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN-----VQ 253 D+ EI + I L + + L I + Sbjct: 240 DDITHSVEIEIARNIFERIETKYLLRVPQTEINFLAMYINNHSNFRNTDYISEDLNEFIL 299 Query: 254 GLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 L+++ + + D L ++ HL+ ++ + + ++ +K ++P AFD++ Sbjct: 300 YALEKIKESYPTDFLHDVNLRMSLALHLVPLISRAKNNVQIKNEMLDYIKQSFPYAFDIA 359 Query: 313 LHFITLLREQLD--IPLFDSDLIGLYFACALER----HQNERQPIILLSDQNAIATINQL 366 +F LL E+ + I ++ + +YF ++ N+R II ++ + QL Sbjct: 360 TYFSYLLSERYNCLIKESETAFLAIYFNKSINDYAVLKGNKRLCIITNLKRSEYFLLEQL 419 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 ++ I S EL I + L + + + +T A+ ++ Sbjct: 420 LYDQFRKYIADITFVSSQELEKIDLDAFDLFFSTEDNKATEVGLATKLTF--FPDASELQ 477 Query: 427 QIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 +IK + + R F F + + + +++ +Q + + + I Sbjct: 478 KIKVRIEGFKNVEDIIRLFDPRLFFR---AEIPAKEKVQKKLVKT-ASQLYQIENLYEEI 533 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV--NNEVINHVLIACAAADA 544 RE G N +AI H I L +P+ + +N V + C + Sbjct: 534 ELREEFGSTYFGNGVAILHPMHLITNESFIGEIVLKKPIPWDNDGNYVNLVFLVCIQKNN 593 Query: 545 RHELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELLH 580 + + YL+ +L + + + YE F ++L Sbjct: 594 LEAFRAWDYLSPLLFNNQFKQEVLEVENYEHFKQVLE 630 >UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2H7N3_ENTFC Length = 661 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 98/642 (15%), Positives = 216/642 (33%), Gaps = 79/642 (12%) Query: 1 MLNERQLKIVDLL----EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLN-GKARIFASG 55 M+ +++ K++ ++ T LA + +S RTI + + + +I A Sbjct: 1 MIMKQKEKLLLRYLIDHRKEYVTSQRLASELLLSDRTIRNYLQRIKELVEENGGKILAKP 60 Query: 56 SAGYQLEIFERRSFFQLLQKHD--------------NDDR----LLALLLLNTFTPRAQL 97 GYQL I +R +F L + + ++DR L LLL + L Sbjct: 61 GYGYQLHILQRLTFDLFLSRQEIVPGYAREPQGFYESEDRQKYILNQLLLEDAILFMDDL 120 Query: 98 ASALNLPETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDP-- 154 A L + + + + + +K+R + + S+ G G +I+ E R + + + Sbjct: 121 AEELYISRSSLTKDMQAIKERLIPYSLKIVSKHGQGIWIEGEERNRRHFIMDTFFGNHCG 180 Query: 155 -FLIPLAGITR-----DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ 208 L G +R + + D L D++ + AL + E + Sbjct: 181 NSLKEYLGQSRFFTDISFEELVIIILDETREAKLKVSDFIIQNLSLHLALGIKRLREGFE 240 Query: 209 YPGDEIKQ-------------------IVEHSGLFLGDNAVRTLTGLIEKQH---QQAQV 246 I+Q ++ + A TL + + H + Q Sbjct: 241 IKELGIEQEVSDRVEYQVAQRIVQRIEVIADVSFPQEEIAYLTLHLMAKSNHRENKNDQE 300 Query: 247 ISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 +S + V+ L + I D QL + HL + +K P Sbjct: 301 LSKEVVKVLKRLSQEFRFSLIEDHQLFNGLLDHLSPMMIRLSRGIRIENPLTEEIKKENP 360 Query: 307 AAFD-MSLHFITL-LREQLDIPLFDSDLIGLYFACALERHQNERQ--PIILLSDQNAIAT 362 F+ + HF + + I + + L+ ALE+ + + +I+ + A Sbjct: 361 KVFEAVKTHFSNMPALKNYTINEDEWAYLALHLMAALEKERAAHKLHALIICATGYGSAQ 420 Query: 363 INQLAIERDV-LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + + + + N V+ + E+ + LII++ + V + Sbjct: 421 LLKNRVISEFGKNITVVNVKGYYEINETTLK-GIDLIISSIDLSTMFFKIPVLHVSIFLN 479 Query: 422 AAGIEQIKHFLATA------------FIRQQPERFFSAPGS--FHYSNVRGESWQHITRQ 467 + +I+ + + F QQ ++ ++ S F + + + Sbjct: 480 EDDVHKIRKVIGESIPYHSSDRPIPVFSLQQKKQIYTEQLSEKFFKTYTYEPKKEEVLHD 539 Query: 468 ICAQLV---AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP 524 + +L + +I + ++I RE G+ + + +A+PH + + Sbjct: 540 LLQKLSINEEEGYI-REMRKQIQQRESMGQIIFSDTVAVPHPAVPVGIETKVAVALIPSG 598 Query: 525 VEV-NNEVINHVLIACAAADARHELKIFSYLASILCQHPAEI 565 ++ + I+ V + + + + + L Sbjct: 599 MQWYQYQGIHFVFLVSPSYIENEGITVVTKAIVRLVDQLNVQ 640 >UniRef50_C9ASX5 Transcriptional antiterminator n=18 Tax=Enterococcus RepID=C9ASX5_ENTFC Length = 549 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 73/509 (14%), Positives = 181/509 (35%), Gaps = 44/509 (8%) Query: 82 LLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEK 141 +L L QL+ + + +A + +K + + S G + + E + Sbjct: 19 ILNRLSNFEHVSYQQLSEEYYVSRSSIANDISYIKYVFAKEGLNLSFDRFGTYFEGNEIQ 78 Query: 142 RVILLANLLRKDPFLIPLAGITRDN--LQHLSTACDNQ--HRWPLMQGDYLSSLILAIYA 197 +L ++ + + D L + + + + Y SS+I++I Sbjct: 79 VQKVLKRMILNHFDELEIVREIVDRKLLAIVERSFRESIADKQIELPESYFSSIIVSILL 138 Query: 198 LRNQLTD-----------------EWPQYPG--DEIKQIVEHSGLFLGDNAVRTLTGL-- 236 + +L + E+ +YP + + Q+ E V+ LT + Sbjct: 139 MIQRLREGKKISLKGKNQYGKYFLEFNKYPLVCELLHQLEEQRIYQFSQEEVQYLTYVIV 198 Query: 237 -----IEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWI 290 +++ ++ + ++ L+Q+V +++ D++L E++ HL + L Sbjct: 199 GSGLRFFMKNETIPLVFREKIRQLIQKVSRGIQIDLTQDSRLEEDLLVHLYQLLLRIEAQ 258 Query: 291 AEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER 348 ++ +K +P+ + + + R + L + + + ++F A+ER + Sbjct: 259 TTIVNPLIDEIKQNYPSLYGVVWFALNDFRWPYQVSLSEDEVGFVAIHFQAAIERVKRLN 318 Query: 349 QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDD 408 + + + + ++ I R + + I S+ +L + + LII+ + Sbjct: 319 RLLFVCPNGMGTSSFVSAKIRRILPDIDSIETASVDKLNRLDL-FDVDLIISTVD--IPK 375 Query: 409 AVNNYITVKNIITAAGIEQI-KHFLATAFIRQQPE---RFFSAPGSFHYSNV---RGESW 461 + + + ++TA +++I H++ +Q SNV +S Sbjct: 376 QIRPVVRISPMVTARDMKRIMNHYIDLVIDNEQINIEGSIAEKVKPLISSNVYFDHFDSK 435 Query: 462 QHITRQIC-AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFIT 520 + R + Q I RE + N AIPH ++ + Sbjct: 436 EAAIRFLVDQQQFENEESKQRFLYSIFEREEIQSTYLENGFAIPHGNPNVVKQTSVAVLI 495 Query: 521 LAQPVEVNNEVINHVLIACAAADARHELK 549 +P + + V++ + E++ Sbjct: 496 ADKPFSWGYQKADIVVLLMIREEDVKEVE 524 >UniRef50_B4U0E0 Sorbitol operon transcription regulator SrlM n=3 Tax=Streptococcus equi RepID=B4U0E0_STREM Length = 622 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 94/579 (16%), Positives = 202/579 (34%), Gaps = 50/579 (8%) Query: 2 LNERQLKIVD-LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L R +I++ L+ Q EL Q VS +T+ + I+ LN L+G A A Q Sbjct: 3 LVNRWYRILEPLVAQNQMAFEELRLQLDVSAQTLAKSIEQLNDILDGDAT-ITQQGAFLQ 61 Query: 61 LEIFERRSFFQLL-----QKHDNDDR-------LLALLLLNTFTPRAQLASALNLPETWV 108 L++++ +L + D + L LL ++ LA + + + + Sbjct: 62 LQVYDYARLETILAGSLRKASDFNSASKRVAYLLKRLLQSSSALVIDDLADEIGVSRSTI 121 Query: 109 AERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 + L K + + +P G TE +L + + K L+G + L Sbjct: 122 NKDLKTAKALARSYSVMIQGKPNHGIQAVGTELNLRLLYVHEVYKYFEPQGLSGDSLFFL 181 Query: 168 QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGD--------EIKQIVE 219 L + + L+ I + R LTD P Y + E+ +E Sbjct: 182 DELYQTYQLPRKIQELLTKSLAITIERMRQGR-YLTDPIPYYSNEVDSNAFMEELVCHIE 240 Query: 220 HSGLFLGDNAVRTLTGL---------IEKQHQQAQVISADNVQGLLQRVPGIASLNIIDA 270 + R + Q + Q +++++ + I Sbjct: 241 LAYQLSLSQYERQFISFPLNIQYIEGLAYQERPLQESIVRLYSKMIEQIKASLLVTIDQD 300 Query: 271 QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD--IPLF 328 +L + HL + ++ + ++ +P AFDM+ +L E+ D I L Sbjct: 301 KLFVALHTHLKLLVNRLIFHVQANDIFHGEIRYKYPLAFDMANVAAQVLAEEFDCAIELS 360 Query: 329 DSDLIGLYF------ACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARS 382 + + LYF A + ++ ++ + + I + VL ++I++ Sbjct: 361 ECSYLALYFEMMMQDAEHVTEPTVKKIAVVCTTGRGTANMICRRL--SKVLGPDLLISQF 418 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE 442 E + I + + + N+ ++ + Q+ Sbjct: 419 SEEQFNPADNDHYFAIFTTVPLKFGQLKSPVVQITNLFDDQWLQ--NEWRRVHHYHQKN- 475 Query: 443 RFFSAPGSFHYSNV-RGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRL 501 + H++ + +G+++ ++ L + + QR++ RE L NR+ Sbjct: 476 ---LTTITLHFARLSKGKAYTDYLIEMAELLEDKQLVDRQFGQRLLEREALQSTLFGNRI 532 Query: 502 AIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 A PH +++E + L +P ++ ++ + + Sbjct: 533 AFPHTINDKETKTVLLLGLLDEPYREHDCLVEFIFLVAI 571 >UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8I8_BREBN Length = 701 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 120/685 (17%), Positives = 238/685 (34%), Gaps = 111/685 (16%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNG------------ 47 ++ RQ I+++L EQ+ T G +A+Q GVSGRT+ R++D L+ Sbjct: 3 VSSRQRSIIEILLKEQKGVTVGSIAEQIGVSGRTVHRELDALDSLFEEFELELVRKTGSG 62 Query: 48 -KARIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 + + ++ + + Q+ L ALL + LA L + Sbjct: 63 LEVVGTDDQKSALRMSVLHHMTKEYTAQERK-AIILCALLEASEPVKLISLAIDLKVTTA 121 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 ++ L L+ R L + G G + TE + ++ L+ + L GI ++ Sbjct: 122 TISHDLDDLETMLARYDLSLLRKRGYGVELQGTESSKRRAISRLIAEHLDDHELIGIIKE 181 Query: 166 NLQH-------------LSTACDNQHRWPLMQGDYLSSLI------LAIYALRNQLTDEW 206 N+Q+ L + +L + A L L Sbjct: 182 NIQNKALRDIDSIAERLLGLIDREKLIKVENALSHLDEELPYPLADSAYLGLVTHLALAM 241 Query: 207 PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ-HQQAQV-ISADNVQGL--------- 255 + E EH+ L + I ++ Q Q+ I AD + + Sbjct: 242 ERIEKGEGIHFDEHTLSELNGTPEYEIASNIMERLKQIFQMEIPADEIGYITMHLRGAKL 301 Query: 256 ----------------------LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAE 292 +Q + + DA L + HL L E Sbjct: 302 RHSPDDQVWPENTELMVITKRFIQACEERLDIPLSNDASLFHGLLTHLEPALYRLQRKME 361 Query: 293 HRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNER---Q 349 R + +K +P F ++ + + +L +P + + ++ ALER ++E+ + Sbjct: 362 IRNPILEQIKQNYPELFAVTSEAVHTILPELRVPDEEIGYLVMHLGAALERTRHEQQWYR 421 Query: 350 PIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDA 409 +++ S + I I++++ + S+ +L + + LII+ LD A Sbjct: 422 ALVVCSSGIGSSKILATRIKKEIPEIVSLKNLSMFDLEEV-PATDYDLIISTLPLPLDPA 480 Query: 410 VNNYITVKNIITAAGIEQIKHFLATAFIRQ--QPERFFSAPGSFHYSNVRGESWQ----- 462 Y+ V ++ I++IK+ L T +Q Q + G +R + Sbjct: 481 --EYVVVSPLLPPDDIQKIKYQLHTTSQKQSHQEKSQPVPAGQQSIEQLRAMQYYTAYAN 538 Query: 463 -------------------HITRQICAQLVAQHHI--TADEAQRIIAREGEGENLI-VNR 500 + QI + + I +++I RE G I Sbjct: 539 ELYDGLWGMRWDNRDQDIAQLLSQIIKRQKERGTIEEVEPVVKQLIEREKLGGLGIPGTS 598 Query: 501 LAIPHCWSEQERRFRGFFITLAQPVEV---NNEVINHVLIACA---AADARHELKIFSYL 554 LA+ H +E + F L +PV + + EVI+ ++ + L++ S + Sbjct: 599 LALFHGRNEAVNKASFTFHQLREPVLLRSMDEEVISIDMLLLLLGPKEVPKEGLEVLSEI 658 Query: 555 ASILCQHPAEIIAGLTGYEAFMELL 579 +S+L + + + + + + Sbjct: 659 SSLLIEEEMQAVLKTGETQQIADYI 683 >UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Clostridia RepID=B0K247_THEPX Length = 705 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 115/707 (16%), Positives = 227/707 (32%), Gaps = 140/707 (19%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG---- 55 LNER +I+ L P +LA+ VS RTI D+D ++ L Sbjct: 9 LNERCTQILIRLINSNAPIKISDLAKIFNVSSRTIRYDLDTIDEFLKYNNLPQLIRKPNV 68 Query: 56 SAGYQLEIFERRSFFQLLQ----------KHDNDDRLLALLLLN-TFTPRAQLASALNLP 104 + + R LL + + + +L+ L+ + +A L + Sbjct: 69 GVKFSELLEYRNKVLSLLDNLNIYYYNLSQKERVNIILSELIQQKDYITINSIADKLMVS 128 Query: 105 ETWVAERLPRLKQRYE-RTCCLASRPGLGHFI--DETEEKR--VILLANLLRKDPFLIPL 159 + + + L +++ L S P G + DE +R + LL + D L + Sbjct: 129 RSTIIKDLKDVREWLTRHGLQLKSAPKYGIKVVGDEKRLRRAAIELLTEAIDVDKALDIV 188 Query: 160 AGITRDNLQ--------------------------------------------HLSTACD 175 H++ A Sbjct: 189 KSPIYTRSSVGIDKQITKLFEDIDIPYIEECIQIAERELETVFSDAAFSGLVIHIAIAIK 248 Query: 176 --NQHRWPLMQGDYLSSL-ILAIYALRNQLTDEW-----PQYPGDEIKQIVEHSGLFLGD 227 + +M + L +L I +A+ + + P DEI I H LG Sbjct: 249 RIQLGKDIIMPKEELKALEITKEFAVASNIAKMLEDHFKVSIPLDEIGYITVH---LLGS 305 Query: 228 NAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAP 287 N +T + + Q+++ + + ++ S D QL E + HL + Sbjct: 306 NVSKT-RPYPNENWVEYQLLTEKIITNVTNKIHQDLS---GDRQLFEGLLDHLRPTVYRL 361 Query: 288 VWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ 345 + + ++ +KA + F++ + L + L D + ++F A+ER + Sbjct: 362 KHGLKLKNPILDEIKANYKELFEIVKESLKPLEDYTGKALNDEEIGYFTIHFGAAIERLK 421 Query: 346 NERQP----IILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINN 401 + P +++ A + + + V + ++ A + ++ +E + LI++ Sbjct: 422 VTKAPKPNILVVCGTGIGTAKLLSSRL-QSVFDVNIVDAVAYHQVKERLKEKDIDLIVST 480 Query: 402 SHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIR----------------------- 438 + I V ++T IE +K + ++ Sbjct: 481 VPIPYEG--IKTIEVNPLLTEKDIELLKDLVIKPKLQGTVINDLIKIIEKHCVIGNREKL 538 Query: 439 -QQPERFF------------------SAPGSFHYSNVRGESWQHITRQICAQLVAQHHIT 479 + +F NV + W+ R L I Sbjct: 539 IEDLSKFLNVASYENTRGVVQPVLKDLLTKDTIKLNVEAKDWEEAVRIGGELLEKSGAIE 598 Query: 480 ADEAQRIIAR-EGEGENLIVN-RLAIPHCWSEQ-ERRFRGFFITLAQPVEVN---NEVIN 533 +I + G +++ +A+PH E ++ ITL PV N+ + Sbjct: 599 PRYIDAMINTVKEIGPYIVIAPGIAMPHARPEAGAKKIGMSLITLKNPVNFGNKENDPVK 658 Query: 534 HVLIACAAADARHELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELL 579 V+ CA D LK S L +L ++ + I E + L+ Sbjct: 659 IVVSLCA-IDHSSHLKALSELVELLGDENTVKTICEANDVEEVVNLI 704 >UniRef50_Q180U6 Putative transcription antiterminator n=5 Tax=Clostridium difficile RepID=Q180U6_CLOD6 Length = 633 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 86/625 (13%), Positives = 206/625 (32%), Gaps = 53/625 (8%) Query: 4 ERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKA-RIFASGSAGYQ 60 R+ I++ L+ A + GVS RTI +I + ++ GY Sbjct: 1 MRERIILETLKNSSGYLNIDYFADKLGVSTRTIRNEIKKIETIKECNGFKLEYKSKLGYI 60 Query: 61 LEIFERRSFFQLLQ----------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 L I ++ F L+ + + ++ LL+ + QL+ + + + Sbjct: 61 LNIKDQDKFEHYLRNLPSDLVENPEQRLESIIVELLVNEGYKTIEQLSKKFLVSSSQIKN 120 Query: 111 RLPRLKQRYERT-CCLASRPGLGHFIDET-EEKRVILLANLLRKDPFLIPLAGITRDNLQ 168 L ++ ++ + T L + G I+ + +E + IL+ + R + + DNL+ Sbjct: 121 DLKKIDEKIKDTELKLERKAHYGIKIEGSIKEIQSILVDSYFRGNRNITEYRNKFIDNLK 180 Query: 169 --HLSTACDNQ------HRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEH 220 ++ + N + L+ +I+ + ++ I++ Sbjct: 181 LANIRSTIKNVLNEHDLEANLTELEEILAQIIILYIRVSMRVAGNASDLKLYTEDLIIDK 240 Query: 221 SGLFLGDNAVRTLT----------GLIEKQHQQAQVISA------DNVQGLLQRVPGIAS 264 + + L ++ + ++A + + D + + + + Sbjct: 241 LLDKIFRDKKYNLNYDEKYYLKELIKLKTKDKKATIKNIDKNKLQDIMFEFFREIDKKYN 300 Query: 265 LNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 N + D + H+ + + + +P F++S+ F ++ + Sbjct: 301 SNFLEDKEFFNLFYLHIACLIERIKKNHKIINPFSVKISQQYPTVFNLSIQFSKIIENEY 360 Query: 324 DIPLFDSD--LIGLYFACALERHQ----NERQPIILLSDQNAIATINQLAIERDVLNCRV 377 I + + I + A E+ + N++ I ++ + +++ Sbjct: 361 HIKISQDEIGFIATHIAVPFEKREEANFNKKYKIAIICSSGGGSAFLINLRLKEIFPNAE 420 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFI 437 I SL E E P LI + ++ L + + + + ++ + I Sbjct: 421 IRNFSLLE-EKAVIEFAPDLIFSITNLLFEINAPVILINEILDELDYLDIKESVRFADHI 479 Query: 438 RQQPERFFSAPGSFHYSNVRGESWQH----ITRQICAQLVAQHHITADEAQRIIAREGEG 493 G F ++ R + I + +V + + + + RE Sbjct: 480 GNISSPKQYILGLFDKNHFRCIKDKAKYKDILDSMSKCIVDEGACSPTYPKDVWERESYL 539 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV-LIACAAADARHELKIFS 552 + N +AIPH + + + N V + +I+ + +I Sbjct: 540 STIYTNGVAIPHPIEMTGNKNIISVALIQTDIIYENRVPKIIFMISLIKGNLELHKQISK 599 Query: 553 YLASILCQHPAEI-IAGLTGYEAFM 576 YL+ I+ + YE FM Sbjct: 600 YLSKIMANKDMVDMLNKSQSYEEFM 624 >UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus pneumoniae RepID=B2ISN0_STRPS Length = 659 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 85/610 (13%), Positives = 205/610 (33%), Gaps = 72/610 (11%) Query: 1 MLNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGS- 56 +LN ++ I+ L +++ T ELA+ S RT+ + + T+ + S Sbjct: 3 VLNIKEKDILQFLIKNKERFVTSKELAEYLSCSDRTVRNVLKLIEKTMIIQGVRLISKQG 62 Query: 57 AGYQLEIFERRSFFQLLQKHDNDDR----------------LLALLLLNTFTPRAQLASA 100 GYQ+ + ++ + Q ++ ++ L LL LA Sbjct: 63 QGYQIFFENQGAYQEFRQTYELEEDYTKTAVSKGDDRLVFILNKLLFEQVPVLFDDLADE 122 Query: 101 LNLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPL 159 L + + ++ +++ + SR G ++ E + + N ++ F + Sbjct: 123 LYVSRSTLSHDFRKIRVMLSEYNLSIESRANKGVYVSGEERDKRRFIINYFLENQFFKTI 182 Query: 160 AGITRDNLQHLSTACDNQHRWPLMQGDY----LSSLIL------------------AIYA 197 + N + + R L + LS +L I Sbjct: 183 HCYVKFNFFDQTVPLEEFARIVLDECQEANLKLSDFVLQNLVVHIALSVIRLKSGFEIKN 242 Query: 198 LRNQLTDEWPQYPGDE--IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQ----VISADN 251 + Q+TD+ + + + ++ E + + +T + + QQ Q IS + Sbjct: 243 IDCQMTDDAIERKVAQRILSKVREVTNQEFPVQEIDYITLHLLAKSQQCQKNQKNISEEV 302 Query: 252 VQGLLQRVPGIASLN-----IIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 ++ L + L+ D QL+E + HL+ ++ +K + Sbjct: 303 LKKSLFKTFQNLGLDDMYNFSSDFQLIEGLITHLMTLQVRLESRITLNNPLVDEIKQNYS 362 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ--NERQPIILLSDQNAIAT 362 F M+ + + + L+ + D + + L+F A+ER + + + + + A Sbjct: 363 DIFFMTREILANMDKFLEWTISDDEVAYVSLHFLAAMERSKESTKFNILAICATGFGAAQ 422 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIE----PLLIINNSHYLLDDAVNNYITV-- 416 + + +E + RV + + +E+++ + ++ S+ V Sbjct: 423 MLRNRLETE-FGKRVEVVDVIGYYELNQEKLKGIDFIVSAVDLSNLYFQIPVFKVSVFLK 481 Query: 417 ----KNIITAAGIEQIKHFLATAFIRQQP-ERFFSAPGSFHYSNVRGESWQHITRQICAQ 471 + I A Q+ ++ ++ I + F ++ ++ ++ Sbjct: 482 SDEMEMIRKAMDQMQVSSYVQSSKINKFENNSFRQYFSKENFLICTESDKVNLLEKMVES 541 Query: 472 LV--AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 L + I RE + ++A+PH + + +N Sbjct: 542 LSVGESNEFEQSLLYGIKQREELSSVVFSEKIAVPHPIQPFGTEGKVSVEICKDSLLWDN 601 Query: 530 EVINHVLIAC 539 + + L+ Sbjct: 602 QSSHVQLVFL 611 >UniRef50_B9DVZ2 Transcription antiterminator n=4 Tax=Streptococcus RepID=B9DVZ2_STRU0 Length = 623 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 82/568 (14%), Positives = 184/568 (32%), Gaps = 48/568 (8%) Query: 12 LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQ 71 L+ Q + L Q +S +T+ + I+ LN L+G + +L +++ Sbjct: 14 LVIQNQMSFDTLKQNLKISSQTLNKSIEQLNAVLDGD-VEIIQKNNQLELAVYDYARLET 72 Query: 72 LL-----QKHDNDDR-------LLALLLLNTFTPRAQLASALNLPETWVAERLP--RLKQ 117 +L + D + L LL ++ T LA + + + + + L +L Sbjct: 73 ILAGSLRKTSDFNSASKRVAYLLKRLLESSSSTFIDDLAEEIGVSRSTINKDLRTAKLVA 132 Query: 118 RYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQ 177 Y + P G + E + +L + + + L + L+ L Sbjct: 133 EYYH-VSIKGIPNRGVQLLGHELQLRLLFIHEVNNYFEIDTLKEESYLFLEQLYQTYRLP 191 Query: 178 HRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLI 237 + + ++ I I + L + P Y + ++ + A R Sbjct: 192 LKIQELLTKSIAISIKRIQT-NHHLLESIPFYSNEVNSDAFMEELVYHLEIAYRISLSQF 250 Query: 238 EKQ-------HQQAQVISADN----------VQGLLQRVPGIASLNIIDAQLVENITGHL 280 E+ Q +S Q ++Q V +N +L + HL Sbjct: 251 ERDFISFALNTQYIDSLSYQEGGVSQKLLNLYQEMVQEVKDSLLINFDQEKLFVEMHTHL 310 Query: 281 LRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD--IPLFDSDLIGLYFA 338 + ++ + +K +P AF+M+ +L + I L + + LYF Sbjct: 311 KFLVNRLIFHIQANDLFHGEIKQKYPLAFEMATVAGKVLEKNFATRIELSECSYLALYFE 370 Query: 339 CALERH-----QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEI 393 + Q + + I ++ VL ++I++ E ++ Sbjct: 371 LIMREKEDQIVQTKMKKIAVVCTTGRGTANMICRRLAKVLGPDIVISQFSEEQFNPEKDD 430 Query: 394 EPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHY 453 I + + + N+ ++ + I Q+ + + Sbjct: 431 NYFAIFTTVPLKFGQLKSPLVQITNLFNDQWLQ--NEWQKVQHIHQR----RQKSNTVRF 484 Query: 454 SNVRGESWQHI-TRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQER 512 + ES ++ LV + + +RI+ RE + L N++A PH + ++ Sbjct: 485 IRLEEESTYETYLIKMATALVDEGLVDLAFPERILQREEKQSTLFGNQIAFPHTLNLLDQ 544 Query: 513 RFRGFFITLAQPVEVNNEVINHVLIACA 540 L + ++ + + + Sbjct: 545 NPVLMVGILEKLFVAGSQEVALIFMVAI 572 >UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax=Streptococcus RepID=A8AYJ7_STRGC Length = 662 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 98/623 (15%), Positives = 200/623 (32%), Gaps = 96/623 (15%) Query: 2 LNERQLKIVDLLEQ---QPRTPGELAQQTGVSGRTILRDIDYLN--FTLNGKARIFASGS 56 +++++ I+ L Q T ELA S RT+ + L T +I A Sbjct: 1 MHQKEKMILQYLMDNADQYITSMELATHLTCSDRTVRNYLKSLVGMPTSQTGWKIIAKQG 60 Query: 57 AGYQLEIFERRSFFQLLQKH---------------DNDDRLLALLLLNTFTPRAQLASAL 101 GY+ I + + + LQK + L LL LA L Sbjct: 61 HGYRFIIDNKDVYQKFLQKEVLGEASTEAIEGIDDRYNYILNKLLFEQESIYFDDLADEL 120 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETE------EKRVILLANLLRKDP 154 + + ++ +++Q + + S+P G ++ E + Sbjct: 121 YVSRSTLSSDFKKIRQDLSKYDLEIESKPKRGVYVTGDERNIRRFIIEFFFHDKFFQILH 180 Query: 155 FLIPLAGITRD-NLQHLSTACDNQHRWPLM------------------------------ 183 I L R +L+ L+ ++ R + Sbjct: 181 NYIKLEVSGRPISLEELTIIVLDECREGQLKLSDFVIQNLVIHIALSLKRIGEGFQIKQL 240 Query: 184 ----QGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEK 239 +Y +A L+ ++P +E+ I H L N L + Sbjct: 241 DSWSMDEYREEGKIAEKILKRVYHSTGLKFPKEEVDYITLH--LVSKGN----LQTNKCE 294 Query: 240 QHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMN 299 + AQ I + L Q D QL+E + HL + + Sbjct: 295 KEDVAQQIRKQLLFVLEQSNFTHEYPFKNDFQLIEGLVAHLSTLFVRLKNHVKMDNPLLA 354 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ--PIILLS 355 ++ + +M+ + ++ + + L + + L+F +LER + +++ +++ + Sbjct: 355 EIQNHYAGVLEMTGNILSAMPIFANEKLSADEVAYVALHFMTSLERLKEKQKFNILVICA 414 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYI- 414 A + + I+ ++ N V I + E ++ + I +S L + N + Sbjct: 415 TGYGSAQMIKHRIDNELGNL-VRIVDVIGYYEINDERLKNIDFIISSIDLSNLVFNIPVF 473 Query: 415 TVKNIITAAGIEQIKHFL-------------ATAFIRQQPERFFSA---PGSFHYSNVRG 458 TV + + I +I+H + T + ER F A P F N Sbjct: 474 TVSIFLNSDEIREIRHKISLLKPIKNYKLDQETNVVESDQERIFDAYFSPECFAVLNE-- 531 Query: 459 ESWQHITRQICAQLV--AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRG 516 + + + ++ I RE + + +A+PH + + Sbjct: 532 VNKDQVIDSLLQRMSQGEDEQFVPKMKDLIEQREEMSSIVFSDTVAVPHPIKAYAKGHKI 591 Query: 517 FFITLAQPVEVNNE--VINHVLI 537 + + V + E I V + Sbjct: 592 GVALVPEGVVWSPEYPKIKLVFL 614 >UniRef50_D2EIS8 Predicted protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIS8_PEDAC Length = 639 Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 101/648 (15%), Positives = 215/648 (33%), Gaps = 84/648 (12%) Query: 2 LNERQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDID---------YLNFTLNGKARI 51 +++R+ +IV+ L ++A+ T +S R+I +D L T I Sbjct: 1 MHDREAEIVEFLIHHGVVHYEQIAKATKLSKRSIANYLDIIENDAQPFNLKLTRKPNVGI 60 Query: 52 FASGSAGYQLEIFERRSFFQLLQKHDNDDR--LLALLLLNTFTPRAQLASALNLPETWVA 109 + +G + + + R L LL + +LA L + + + Sbjct: 61 YLNGQLRNKQDFLAALKLHSGFTSKEARIRYLLTKLLDADRSYTLNELADDLYVSRSTLE 120 Query: 110 ERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQH 169 ++++ + R G I + E+R L+A +L+ + +D Sbjct: 121 SDFKQIREFFNEHHVKIKRGANGIAIRASGEQRERLMAKILKTYWG--QNISVIQDANGQ 178 Query: 170 LSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT--DEWPQYPGDEIKQIVEHSGLFLG- 226 +++ L DYL ++ L ++ E+ S Sbjct: 179 IAST--------LKLPDYLL-NFFPADLVQAVLAGITDFMVTSRLELTDYDLQSLAIHLI 229 Query: 227 ---DNAV-------------RTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-- 268 D+ V T L + Q+ SA +Q + + + I + Sbjct: 230 INTDDKVTNDVESLGPDLIPETSQLLNAIKKQRTINFSATGLQRVNRYLEVIVARQKNSY 289 Query: 269 -------------------------DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKA 303 D L+ ++ HL + + +K Sbjct: 290 QASDVAQTEKQYYQFLLDKLAELEPDEVLLRDLAIHLATAVDRLKKGIVIDNPYTDEIKM 349 Query: 304 AWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIA 361 P AFD+++ + Q + L D++ + L+F ER PI + +A Sbjct: 350 NLPIAFDVAIQLGEAIETQYPVQLHDAELGYLALHFEAFFERCHLH-APIETVVVSSAGV 408 Query: 362 TINQLAIER--DVLNCRVIIARSLSELVAIREEIEPLLIINNSH-YLLDDAVNNYITVKN 418 +QL +R + N + + R L ++ + ++++ Y L V I V Sbjct: 409 GASQLLAQRLEERFNNSLKVTRILDLATVMKTNLSEKMVVSTIPIYGLKQPV---ILVSP 465 Query: 419 IITAAGIEQIKHFLATAFIRQQPERFF-SAPGSFHYSNVRGESWQHITRQICAQLVAQHH 477 ++ I+QI H + + FF + +S+ + +I L Q+ Sbjct: 466 LLPPEDIQQINHAIISLTKNNHSNSFFNLLDPQLIQIDSVKKSYVTVLEEIVGSLTKQNI 525 Query: 478 ITADEA--QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 + + + ++ RE +N +AIPH ++ + Q V+ + V Sbjct: 526 LVNNPKILEMLVEREKMSSTA-LNAVAIPHIAPNYVQKSAIALWLVPQGVQWLGNTVYVV 584 Query: 536 LIACAAADARHELKIFSYLASILCQHPA--EIIAGLTGYEAFMELLHK 581 + + + + + + ++ A + +A + ME + K Sbjct: 585 IFLALTREQVAASREVYQILNRMVENTAFCQQLAQVATASEAMEHIQK 632 >UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0J7_9FIRM Length = 708 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 110/662 (16%), Positives = 207/662 (31%), Gaps = 110/662 (16%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 L R I+ LL T +A + GVS RT+ R++ + L + AG Sbjct: 22 LTARMRTILSLLLAASGYVTAEHIAAELGVSARTVTREMHGIETALEPYGVMLLRRTGAG 81 Query: 59 YQL-----------EIFERRSFFQLLQKHDNDDRLLALLLLNT-FTPRAQLASALNLPET 106 + L L L+A LL+ LA L++ ++ Sbjct: 82 FMLSGDAAALGHLRTELSLADVHSTLTPDQRRSILIARLLMADGPLKLFTLAHLLHVTDS 141 Query: 107 WVAERLPRLKQRYE-RTCCLASRPGLGHFID--ETEEKRVIL-LANLLRKDPFLIPLAG- 161 V+ L RL+ R L RPGLG +++ E + +R ++ + + + L+ L G Sbjct: 142 TVSHDLDRLQPWLAARQITLVRRPGLGVYVEGAERDIRRALVRIIHDYVDEKELLALIGD 201 Query: 162 ---------------------------------ITRDN----------LQHLSTACD--N 176 T+D + HL+ A Sbjct: 202 DAAEEGPAYAADRALLGLVDPAQIRRIDDAVAAETQDRNIPDSARVGLVVHLALAVRRLQ 261 Query: 177 QHRWPLMQGDYLSSLILA-----IYALRNQLTDEW-PQYPGDEIKQIVEHSGLFLGDNAV 230 Q M L L + ++ + + P EI I H L Sbjct: 262 QGDTIAMDAGTLEELRQTEEFSVAETIAARMGEVFSISIPAAEIGYITMH----LLGARG 317 Query: 231 RTL-TGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPV 288 TL +G + + Q +++R + ++ L+ + HL L Sbjct: 318 MTLPSGGGRVDNFRL----VQIAQSIMRRASEKSGAPLMRSRTLLTGLVNHLAPALHRLK 373 Query: 289 WIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER--- 343 + R + ++ P +++ H I ++ E+ +P+ + + I ++ AL Sbjct: 374 LHMDIRNPLLAQMEEEHPELMEIARHAIPMMEEEAGMPVPNDEVAYIAIHIGAALTEAGG 433 Query: 344 HQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSH 403 + ++ + + + R RV+ S S + +E + S Sbjct: 434 DHPAARVLVACPTGLGTSRLLASRLRRSYERIRVVGVVS-SLALTAQEILRRSADFVVST 492 Query: 404 YLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQH 463 L + V +TAA QI LA + AP F Sbjct: 493 VPLSPLPVPVVVVSVFLTAADRAQIDAVLAGCSVHHADVPADPAPLPFPAVMAEIHRRSG 552 Query: 464 ITRQICAQLVAQHHIT----------------------ADEAQRIIAREGEGENLIVNRL 501 + + Q +++ D A ++ RE ++ Sbjct: 553 LICDLLTDFHLQENVSAASIEQLANAAAHLLLAEDAAAKDFADELLRRERIAPTWAAPQM 612 Query: 502 AIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADAR-HELKIFSYLASILCQ 560 + H ++ R R + LA P+ + L+ A E +I ++A+ + Sbjct: 613 ILLHGCFARQERARFGVMHLAHPLPYGGGAVQTALVMLVPAGEAEMERQILGHVAAQIAD 672 Query: 561 HP 562 P Sbjct: 673 RP 674 >UniRef50_A8S5N7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S5N7_9CLOT Length = 665 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 71/591 (12%), Positives = 181/591 (30%), Gaps = 66/591 (11%) Query: 11 DLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRS-- 68 LL+ + ELA+Q +S T+ ++ L L + + + + +R Sbjct: 116 LLLKATHPSFEELAEQMYISTVTLNNELVRLRNELKEHSLYLKTKNNRLFIIGQDRDKRR 175 Query: 69 -----FFQLLQKHDNDDRLLALLLLNTFTP-RAQLASALNLPETWVAERLPRLKQRYERT 122 Q L++ + N + + ++ + L Sbjct: 176 FTMLLLNQELRQSHFKLENMQKFFQNVTINDISDMVRQTLRNHSYFLDDFSFLNYVLHLA 235 Query: 123 CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPL 182 C+ ET R R+ P I H+ + H+ Sbjct: 236 ICI-----------ETTLSR--------REVPDTINSVMDNYSFTPHILEIVKDIHK--- 273 Query: 183 MQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ 242 L+ + + L + I+ + S F E+ H Sbjct: 274 ----NLTDIYHTDISFTQVL--DASVLMTTRIRSVNLSSLNF-------------EQIHT 314 Query: 243 QAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 + ++ V I +++ + HL + ++ +K Sbjct: 315 ILPAQVCGILFKIITAVHSIYGIDLKADNFMVRFAFHLKNLMDRAANSLVVPENYFITIK 374 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQ 357 +P + ++ + +++ +++ L +++ I L+ +E N I ++L D Sbjct: 375 DDYPFLYVIAEYIASIIGQEIHAALPENEISYIALHLGVLMEEKNNAATKINCVMVLYDY 434 Query: 358 NAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVK 417 + I++ + + E + ++ ++ L + Sbjct: 435 YNMGVTIFEHIKQMAAPINLYGIVTSYEQIQNLSSVDLIITTLPEESDLGIPTIKIHLLP 494 Query: 418 NIITAAGI----EQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLV 473 I ++ + + +Q ++ F F ++N S + + + +C ++ Sbjct: 495 TRQDYESILLKATELTQNIHHRELARQIQQLFKKELFFPHTNF--LSREEVIQFLCERME 552 Query: 474 AQHHITADEAQRIIAREGEGENLIVNRLAIPH---CWSEQERRFRGFFITLAQPVEVNNE 530 A +++ Q I+ E + N +A+PH R P+ + Sbjct: 553 ASNYVDKAFHQEILYHEQVAPSAYRN-VALPHPLTADESLTRVSSIAVAINDHPIPWDTN 611 Query: 531 VINHVLIA-CAAADARHELKIFSYLASILCQHPAEIIAGLTG-YEAFMELL 579 ++ + + D + +F+ ++S L + ++ F+ L+ Sbjct: 612 QVDFIFLLSLRGEDRQLFKDVFTIISSFLQSDSNCRLLKSCDSFDTFVNLI 662 >UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03XN7_LEUMM Length = 663 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 102/602 (16%), Positives = 202/602 (33%), Gaps = 72/602 (11%) Query: 9 IVDLLEQQPR--TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSAGYQLEIFE 65 ++ L++ R T EL+ ++ RTI I L TL + + A S GY+L I Sbjct: 9 LIYLVDNSDRFVTSEELSTLLSLTPRTIRNYIKILKETLVSQGALLDAKPSLGYRLHISH 68 Query: 66 RRSFFQLLQKHDNDDR-----------------LLALLLLNTFTPRAQLASALNLPETWV 108 +F L K+ + L L++ N LA L + T + Sbjct: 69 PVTFDLFLNKNYELSQWLINEDSNNISDRQKYILNKLIIENQKFLIDDLAEKLFVTRTTL 128 Query: 109 AERLPRLKQ-RYERTCCLASRPGLGHFIDE-TEEKRVILLANLLRKDPFLIPLAGITRDN 166 ++ L +++ + S+ +G FI +KR +L I + Sbjct: 129 SKDLSIIRKVLMPYRISVESKANIGVFITGLERDKRHFILDYFFSHSENSIQHYMKNKSF 188 Query: 167 LQHLS------TACDNQHRWPLMQGDYLSSLILAIYALRNQLTD------EWPQYPGDEI 214 + +S D + D+ I+ AL Q P EI Sbjct: 189 FKAISFDQITIIVLDECREAGIHLTDFTIQNIVLYIALSVQRLKCGFELQAAPVDINPEI 248 Query: 215 KQIV---------EHSGLFLG--DNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIA 263 + + SGL L ++ V LT + Q + + + +Q L + Sbjct: 249 RNVSDVARKIFSRIESGLALKFPESEVDYLTIQLMAQGKNINIQNDGPLQRDLDMILQRI 308 Query: 264 SLNI-----IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 L D L +NI HL + + + + +K + + F + +I Sbjct: 309 ELETDYPVTKDYALKKNIIEHLKPMIVRLEQGIQLKNPLLQEIKTNYLSEFMDTKRYIKW 368 Query: 319 --LREQLDIPLFDSDLIGLYFACALERHQN--ERQPIILLSDQNAIATINQLAIERDVLN 374 + DI + + L+ A E+++N + + +I+ + A + +E++ Sbjct: 369 SPYLSRFDINDDEVAYLALHLMAAAEKYKNLNKPRALIICATGYGSAQLLNNRVEKE-FG 427 Query: 375 CRVIIARSLSELVAIREEIEPL-LIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLA 433 + I + + LII+ I V +T A +++I FL Sbjct: 428 MYLNIVDIKGYYEVDDTTLSNVNLIISAIDLSTRVFKVPVIQVSIFLTEADVQKINEFLD 487 Query: 434 TAFIR---------QQPERFFSAPGSFHYSN-----VRGESWQHITRQICAQLVAQH--H 477 +R Q + F + + + +++ L++ Sbjct: 488 NEQVRNKYIAVEKKQPINSVLNHFDQFIDQSSFKIWQVSPHRKELLQELTNMLMSNEPTE 547 Query: 478 ITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLI 537 + + ++I RE + + +A+PH R + + V ++E N L+ Sbjct: 548 LKHEFLEQIDQREQLSSIVFSDTIAVPHPAMPMSRVPKIAIGIIPNGVRWSDEHPNIQLV 607 Query: 538 AC 539 Sbjct: 608 FL 609 >UniRef50_D0BLL7 PRD domain-containing protein n=2 Tax=Granulicatella RepID=D0BLL7_9LACT Length = 650 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 91/618 (14%), Positives = 218/618 (35%), Gaps = 89/618 (14%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR--------- 50 +N+RQ+ +++ L + + + +LA + VS +T+ +DID +N L G + Sbjct: 1 MNKRQVLLLEYLMKNIEYLSANQLADRYKVSTKTVYQDIDKINDFLKGNSIETEVIKIPR 60 Query: 51 -----IFASGSAGYQLEI--FERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNL 103 + + +I ++ + + L + + + + + + Sbjct: 61 KGIKLLSQLENKKIHTKIIKLNGEMKESFSPEYREKELIRKLFITHEKVDLYEFSEEMFV 120 Query: 104 PETWVAERLPRLKQRY-------------------ERTCCLASRPGLGHFIDETEEKRVI 144 ++ + + +L + ER A + F+ + R Sbjct: 121 TDSTIHRLIDKLNSIFISFDVKLKIKRDEIILKGNERNIRKALEIFIVKFVS-NDRDRFK 179 Query: 145 LLANLLRKD------PFLIPLAGI-----TRDNLQHLSTAC---DNQHRWPLMQGDYLSS 190 L K+ ++ L+ T + L L C ++ + + LS+ Sbjct: 180 NLELFFSKEDINNCQKSIVKLSEKYQFHFTDEYLYSLLLDCLIFKKRNEANEILTNRLSN 239 Query: 191 LI-----LAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQ 245 L+ L +Y +L + + ++I + + + + ++ Sbjct: 240 LVNDVNHLEVYFFAGELLETILNFTLEKISPYEIEAMAYNLLAFGFNIQSVEYMKN---- 295 Query: 246 VISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAA 304 + V+ L+Q+V + SLN+ D L ++ H+ + + ++ +K Sbjct: 296 --VNEQVKTLIQKVSNLLSLNLTTDEHLQMMLSAHISKMIIRLRNQNFISNPALEEIKKQ 353 Query: 305 WPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIAT 362 + + F++ I L + ++ + + + I ++F A+E+ +++ + A + Sbjct: 354 YSSLFNVIWLSIRTLSQYYELSIPNEELAFIVIHFQVAIEKIMKPLNIVVICQNGIATSE 413 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + + R + + SL EL L+I L+ V I V IIT Sbjct: 414 LIMNKLRRIFSSNEKLTTISLRELDFYDLRNIDLVISTIGLPELNIPV---IEVSPIITK 470 Query: 423 AGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQ-------------IC 469 + I+ F + Q + + S + S + ++ Sbjct: 471 EELRMIQQF----YAEQSTDNYRMMKTSLNGREFNVASLNTLLKEPKLIKINVKNKQECI 526 Query: 470 AQLVAQ---HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVE 526 +L+ + + T + I RE G + +A+PHC + ++ ++L +P+E Sbjct: 527 ERLIIECSIGNQTEEFRDSINQRELLGSTSVYTGIALPHCDPKVVKQSELILMSLDKPIE 586 Query: 527 VNNEVINHVLIACAAADA 544 ++ VL+ A Sbjct: 587 WGKNQVSLVLLIAIAEQD 604 >UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQ92_CLOB8 Length = 641 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 97/629 (15%), Positives = 199/629 (31%), Gaps = 55/629 (8%) Query: 5 RQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI 63 R +I+ L+E+ + +A++ VS +T+ D+ LN L G A I Y++ I Sbjct: 9 RSTRILKLIERRHSISVDAIAEKFEVSSKTVKNDVKELNSLLKGSALIDNKQGI-YKIYI 67 Query: 64 FERRSFFQLLQKHDNDDRLL------------ALLLLNTFTPRAQLASALNLPETWVAER 111 + F ++ N L L+ LA +N+ T V Sbjct: 68 IDNSKFEEIKTNIYNQKEFLNSPQRRMAFILYKLMNSEEPYLTDDLACEMNVGRTTVISD 127 Query: 112 LPRLKQRYER-TCCLASRPGLGHFIDETEEK-RVILLANLLRK-------DPFLIPLAGI 162 L ++++ + + G + TE R ++L NL D +I L Sbjct: 128 LKKMREILNNYDLKIIGKTNNGLALKGTELNIRFLVLENLYEMIYGEYELDEDVIDLVKE 187 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDYL--SSLILAIYALRNQLTDEWPQYPGDEIKQIVEH 220 D Q +T ++ ++ D L I + +L W + I VE Sbjct: 188 ITDQYQFDTTTFESFIHSLVVTLDRLLNGHTINTLSEKYGELLRSWEFTLVNTISDAVEK 247 Query: 221 SGLFLGDNAVRTLTGL------------IEKQHQQAQVISADNVQGLLQRVPGIASLNII 268 R L H + ++ V +L+R+ LNI Sbjct: 248 RLTISIPIKERIFLALPIIGMNTPTNIEGISPHVEITEEVSNLVNHILERIKYDMGLNIT 307 Query: 269 DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF 328 ++++ H+ + + ++ ++ + A+ M+ ++ + LD+ + Sbjct: 308 LDDILKDFVYHMAFLVNRLKYGVHIHNPIVDEIRKKYKVAYKMAELARDVIEKSLDVKMT 367 Query: 329 DSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNC-RVIIARSLSE 385 + I YF + Q E+ I ++ + + + L Sbjct: 368 QDEVGFIAAYFGVFISEQQIEKSKIYKVAVICGTGRVTARLVASQLKGIFDANTVIDLYS 427 Query: 386 LVAIREEIEPL--LIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL--------ATA 435 + EI L+++ K A ++IK + Sbjct: 428 DSTVTSEILDKYNLVLSTVQANFKTTATVIYLEKIFDEEALKKRIKSIKYIDKLDMPSMQ 487 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 + F N S+ + L ++ ++ +RI RE + Sbjct: 488 GMDSILLSILDEDTFFILDNQ--LSYLENVDHMIDNLYSKGYVDDGFKERIRKREEKSTM 545 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL--KIFSY 553 + +A PH + + + + NN+ L+ L KI+ Sbjct: 546 VFNESIAFPHTINYENDEIVVSLGIIPEKAGENNQRKLVFLVGLPEQTKDDTLLVKIYDE 605 Query: 554 LASILCQH-PAEIIAGLTGYEAFMELLHK 581 + +I E ++ + Y+ + K Sbjct: 606 IIAIANDKNTIEALSKVKSYKELILHFTK 634 >UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR family n=5 Tax=Geobacillus RepID=C9RTD1_GEOSY Length = 696 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 113/669 (16%), Positives = 220/669 (32%), Gaps = 106/669 (15%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 ++ R+ K+++ L + + T GELA++ VS RT+ RD+ + L A G Sbjct: 3 VSARERKLLERLLADDRDITVGELAEELNVSARTVHRDLQGIESVLRRYGLGLAKKAGIG 62 Query: 59 YQLEIFE------RRSFFQLL-QKHDNDDR----LLALLLLNTFTPRAQLASALNLPETW 107 +L E F+L ++ ++R +ALL N LA+ LN+ Sbjct: 63 IRLVGEEENKQALAAELFRLSHHEYTPEERQLMIFIALLEANEPVKLVSLATDLNVTVAT 122 Query: 108 VAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLR---KDPFLI------ 157 V+ L +++Q E L + G G + +E + L+++LL + + Sbjct: 123 VSLDLDKVEQTVEAYGLSLIRKRGYGVELAGSESAKRRLMSDLLFRHVDEHEFLALMKET 182 Query: 158 -------PLAGITRDNL-----QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT-- 203 PL + L + LS R ++ + + L Sbjct: 183 IQKRADAPLDTVAEKLLGLVDRKKLSIIEQQIERVKEKLPFTMADSSYIAFVVHLALAIE 242 Query: 204 -----DEWPQYPGD----------EIKQIVEHSGLFLGD------NAVRTLTGLIEKQHQ 242 + P D EI +++ S L+ + + Sbjct: 243 RIKQGEAIHFDPRDLQALQATKEYEIARVLAESLERAFGIDIPNEEVGYMTMHLMGAKWR 302 Query: 243 QAQVISADN--------VQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEH 293 Q + Q L++ V +++ D L E++ HL L Sbjct: 303 SRQGAMMEEPSLAVGMKAQQLIRFVSDKLGVDLSTDRTLYEDLVVHLKPALYRLEHGMGV 362 Query: 294 RQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIIL 353 ++ +K + F + L + +P + + L+FA AL R + + +++ Sbjct: 363 ANPLLDQIKQDYAELFAIVADGARQLFGDIPVPDEEIGYLVLHFAAALMREKKGWRVLVI 422 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNY 413 S A + +++++ + + S E L+I L + + Sbjct: 423 CSSGLGTAKMLATRLKKEIPDIVSLEQASAFEWRGKDVSAYDLVISTV---PLPEEYGPH 479 Query: 414 ITVKNIITAAGIEQIKH------------------------FLATAFIRQQPERFFSAPG 449 I V ++T +I+ +R+ E Sbjct: 480 IVVSPMLTEEEARKIRECLERKSAAEKRMEREPTAQRNRPALDIMKAVRRISETIVHILD 539 Query: 450 SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ--RIIAREGEGENLI-VNRLAIPHC 506 F + V S + + C +L I + + RE G + LA+ H Sbjct: 540 GFSLAAVTHRSVRELLADACRRLERNGFIVDADVVIEELRRRESLGGLGVPGTTLALYHA 599 Query: 507 WSEQERRFRGFFITLAQPVEV---NNEVIN---HVLIACAAADARHELKIFSYLASILC- 559 S R L P V + E + VL+ A L + S+++++L Sbjct: 600 RSFAVLRPSLTMYRLDSPQTVAGMDGEPMEINTVVLLLGPADADEEMLSVLSHVSTLLVK 659 Query: 560 -QHPAEIIA 567 + A +A Sbjct: 660 DEQSAATLA 668 >UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F792_LACPA Length = 651 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 104/599 (17%), Positives = 195/599 (32%), Gaps = 71/599 (11%) Query: 22 ELAQQTGVSGRTILRDIDYLNFTLNGKAR---------IFASGSAGYQLEIFERRSFFQL 72 +L VS + I +D ++ L G I+ G EIF S + Sbjct: 28 DLVANLKVSRKKIAAYLDEIDRRLLGSKVQLVRKRNQGIYFEGDTEQIAEIFHIPSNYDG 87 Query: 73 LQKHDNDDRL-LALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGL 131 L H + L L++ N+F LA + + + L +K+ + S Sbjct: 88 LDVHGRRSIITLNLIMQNSFVKMDNLADDYFVSRSTLERDLRAIKREVSKFGLSVSSTVN 147 Query: 132 GHFIDETEEKRVILLANLLRKD--------------PFLIP-LAGITRDNLQHLSTACDN 176 G I E+ + + ++ P L G + Sbjct: 148 GIAIVGNEQDKRNYASRIISNYWRESIKANRLVVHLPQDFDNLIGSETLRTAQAVLSELQ 207 Query: 177 Q-HRWPLMQGDYLSSLI-LAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLT 234 + + + Y S LI + I +R Q + P + E S L + Sbjct: 208 RVTKIEFTEYQYQSLLIHICISTVRIQNAEYLPTWSSASQALSPETSILTRLLEEAFNIQ 267 Query: 235 GLIEKQHQQAQVI--------SADNV--QGLLQRVPGIA-----SLNIIDAQLVENITGH 279 +Q I + D+ Q + +R+ IA ++ I D QL+ ++T H Sbjct: 268 VPKSEQEYLNIHILAAKQSKLTPDDFKGQVVNRRLLNIADFLKTNIQIYDDQLINDLTIH 327 Query: 280 LLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYF 337 L + + + + +P AF+++ L ++ + + ++ + L+F Sbjct: 328 LGPAMHRFQVGLQASNPYTSEIMRLYPQAFELAFDLSRKLDDRYLVTVDKNEIAYLALHF 387 Query: 338 ACALERHQ-----NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREE 392 +ER N + + ++ + ++ I R LS A + + Sbjct: 388 QSFMERTTKATVSNNKINVAVICSTGLGTARLLTQRLKASFADKINITRVLSVPNAFKAK 447 Query: 393 IEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSF- 451 +II+ L K ++ E + L I +R SF Sbjct: 448 FVEDMIISTIPLELPGQ-------KVVVIKPLFEPKEERLVAKEITNIEDRRTRNQNSFL 500 Query: 452 -HYSNVRG-ESWQHITRQICAQLVAQHHITADEAQ-----RIIAREGEGENLI-VNRLAI 503 S R S +H+ R +++ Q + D A+ IARE LI +++A+ Sbjct: 501 SLMSPTRILVSSKHLERDDAIKMIGQLLVDRDLAKIGVAESAIAREEVASTLIRQDQVAM 560 Query: 504 PHCWSEQERRFRGFFITLAQPVEVNNEVINHVLI------ACAAADARHELKIFSYLAS 556 PH SE ++ + V + V A + F+ L S Sbjct: 561 PHAQSEYIKKSGITLLVATHGVTWGDGEAKFVFFIGLNQHAIKNTNLDAVYHRFNQLVS 619 >UniRef50_C0CN20 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CN20_9FIRM Length = 649 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 95/636 (14%), Positives = 201/636 (31%), Gaps = 69/636 (10%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 L+ RQ K++ ++ Q T ELA VS RTI D+ +N L G S S G Sbjct: 6 LSLRQRKLLHYIQDQHSYVTGTELANHLQVSARTIRSDVAEINENLQGTGISIISKRSLG 65 Query: 59 YQLEIFERRSF-------FQLLQKHDNDDRLLALLLL-NTFTPRAQLASALNLPETWVAE 110 Y L++ +++ L + D + L L L + + T + Sbjct: 66 YLLKVEDKKLLKELNQVSNTFLTRDDRTRHMAFCLCLAEEPINLYTLEDEMFISRTTLEH 125 Query: 111 RLPRLKQRYERTCCLAS--RPGLGHFIDETEEKRVILLANLLRK---------------- 152 L L+++Y + R F ++ E KR I+L L + Sbjct: 126 DLAALRKKYVLPYPHINYCRSKNHIFFEDNERKRRIILNTLFSENWNYNARGNAFYQYQY 185 Query: 153 -DPFLIPLA-----------GITRDNLQHLSTACDNQHRWPLMQGDYLSSLI---LAIYA 197 D L+ L GI +++ + M + L + Sbjct: 186 LDEELVDLIMLESQFYLRKYGIVLEDINMIVLNLAIAIACCRMNDGHFLESRKEPLPLDP 245 Query: 198 LRNQLTDEWPQ---------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS 248 D+ + +P E ++I H ++ G +E + Sbjct: 246 ACVHAADDLLESLEKKLGCIFPDSERQEIYLHLSCARLLDSSALSFGTLELYFAPETIAF 305 Query: 249 ADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 A++ L + L+ D + LR L+ P+ Q+ + +++ Sbjct: 306 ANDY---LALIREKFQLSFSDNEDFYITLLQYLRYLSMPLHYLNTIQTHTDIVRSNLLIE 362 Query: 309 FDMSLHFITLLREQLDIPLFDSDLIGLYF-----ACALERHQNERQPIILLSDQNAIATI 363 +++++ L +++L+ L F A R + + +I+ + Sbjct: 363 YEIAILIQPLALSYTGDYWDETELMYLAFCISGALEAANRTYPKLKTVIMAHLNMPASWH 422 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLD-DAVNNYITVKNIITA 422 + + + + A + + LII ++ L D + + T Sbjct: 423 LKQKLLSAFHDYLELTALLPVYSKDTYDFSKTDLIITTANKTLTCDPHCKTLLISPFFTK 482 Query: 423 AGIEQIKH-----FLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHH 477 ++ + + ++ P F +F + + +S I + + + Sbjct: 483 TDQMNLEKHIFQIHINRLYGQKLPSLFQLLQEAFWHEAILTDSRVSIIELLSRDFLDAGY 542 Query: 478 ITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLI 537 + D + ++ RE +A ++ TL ++ N+ I V++ Sbjct: 543 VELDYVEDLLRREAILPFAFQPGVAFLSSLVPS-KKTCLSVATLEHRIKWNSYKIRTVIL 601 Query: 538 ACA-AADARHELKIFSYLASILCQHPAEIIAGLTGY 572 A D+ K+ + L + Sbjct: 602 AAVCPGDSTLVFKLLNELYYSSRNYEDAKFLKTKEE 637 >UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Clostridium difficile RepID=C9XLJ8_CLODC Length = 679 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 90/643 (13%), Positives = 212/643 (32%), Gaps = 70/643 (10%) Query: 2 LNERQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAGY 59 ++ + KI+ + ++ +A + V+ R++ I LN L N A I GY Sbjct: 32 IDRKIFKILIMCSKKEFVSINSIANELNVTTRSVRTYIKQLNKDLGNDIAVIKYIKGQGY 91 Query: 60 QLEI-----------FERRSFFQLLQKHDNDDRLLALLLLNT-FTPRAQLASALNLPETW 107 +LEI R++ F L K D + +L L+ F LA + + T Sbjct: 92 KLEIKDEQILNKIIDMNRKNVFSLNSKEDRVEFILNYLIELDGFITLDSLADEMCVGRTT 151 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEK-RVILLANLL---------RKDPFL 156 + +++ L + G ++ E R+ +L L K Sbjct: 152 LVNDFQYVEKVLASYNLNLIKKQNTGMKLNGNELDIRLFILNQLYKNSRKDFSNSKYFKG 211 Query: 157 IPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSS--LILAIYALRNQLTDEWPQ----YP 210 I I + L+ +N + + ++L + ++ Sbjct: 212 IKKEEIINLEEKLLTLFKENNFYVTDEMLREVINYIVVLVYRVKEEKKVKDYDVKFDLLK 271 Query: 211 GDEIKQIVEHSGLFLGDNAVRTLT-----------GLIEKQHQQAQVISADNVQGLLQRV 259 + I + TL + + S+ + + + + Sbjct: 272 SYDEYFIAREIKHIISGMFECTLNDEEIIYLTIPLVSGNAPASECALNSSRISKNIDELM 331 Query: 260 PGIASLNIID-------AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 I + +D +L + HL L ++ + + + +K + F ++ Sbjct: 332 ENIFNQIYVDMGIFINEDELRVGLGYHLSFTLNRLLFNIKLKNVLLEEIKQNYILPFKLA 391 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE----RQPIILLSDQNAIATINQL 366 ++ ++ ++ + + + I ++F+ LER+ + ++ I+ S A + ++ Sbjct: 392 QIAGKVIEKKYNLEVSEDEIGYIAIHFSGYLERNSSRFYSIKKIAIICSTGLGTAKLLKI 451 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI- 425 +E+ + N I S L I + E ++ + + + I + Sbjct: 452 RVEKLIGNNPKIDTLSSFNLRNINLD-EYDIVFTTIDLDTSNINTIVLKINTIFDENKLR 510 Query: 426 EQIK--------HFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHH 477 EQ+K + T + ++ ++ L+ Sbjct: 511 EQLKTVLCLREGNIDTTNSTNLLINNLLDEDKFMI---LNEKTILASLEKMMDHLMDLGC 567 Query: 478 ITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLI 537 I + I+ RE + + L PH +E+ +F L +P+E N I +L+ Sbjct: 568 IDDKFRKNIVNREEKSPTVFDKGLLFPHSVNEKSDKFLMAVGILEEPIEYANRSIKIILM 627 Query: 538 ACAAADARHELKIFSYLASILCQ--HPAEIIAGLTGYEAFMEL 578 + + + + + + + ++ ++ F+E Sbjct: 628 TMFPCENKIDSDLLVKIYEEVLKIGQDVKLTNKISKCRTFLEF 670 >UniRef50_D0BMI3 PRD domain/PTS system IIA domain protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BMI3_9LACT Length = 627 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 85/636 (13%), Positives = 221/636 (34%), Gaps = 68/636 (10%) Query: 1 MLNERQLKIVDLLEQQPR--TPGELAQQTGVSGRTILRDIDYLNFT------LNGKARIF 52 ML +RQLK+V++L T +A GVS RT+ ++ + G Sbjct: 1 MLTKRQLKLVEILSNLETYQTVARVANCLGVSERTLHTELKVIESEGFKIDRKRGLGIRL 60 Query: 53 ASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERL 112 + Y + FE + K+ + + ++ LA T + + Sbjct: 61 KELNQEYDISDFEIDNI-----KNRRIEIMKKIIFDQQSITFFGLAEEYFTSTTSIQNDI 115 Query: 113 PRLKQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLLRKDPFLI------------PL 159 + R + LG +D + ++ ++ + F+I L Sbjct: 116 RVISNILFRDTNVNLVSDYLGTRLD--KCSTEEMIKVMVNFNSFIISEMEDRNLDDNNKL 173 Query: 160 AGITRDNLQHLSTACDN------QHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE 213 ++ + + C++ + + Y+ + + L QL ++ + Sbjct: 174 VLLSEYYSRDVVFVCNSILYSFVKKNVNAISDAYIEYFLRYLIVLVYQLKNDRHITLVEN 233 Query: 214 IKQIVEHSGLFLGDNAVRTL--------TGLIEKQHQQAQV--------------ISADN 251 +HS F D+AV+ L + Q + + + Sbjct: 234 SVDYFQHS--FYIDSAVKILHKASLRLNFKYTNEDVQYLSLLLLNYKFEELPQEKVDNNF 291 Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 + L+++V ++N D L++ + H+ L+ + + +K + ++ Sbjct: 292 INDLVKQVSKAMNINFFKDDVLLKQLHQHIPAMLSRLKYQTVVKNPFSEQIKLEYSITYN 351 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAI 368 + + + Q + + + + LYF ++E+ + R+ +++ + + I Sbjct: 352 ILWIILEEILPQNISKINEDENAFLTLYFQLSIEKLKKGRKILVICPTGIVTSELLINKI 411 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 + + I S+SE + L++ + + N V +I+ ++ + Sbjct: 412 KTVSPSFDRIEIASISEAFELDLNSYDLILSTV---KIPKKLKNLYFVSPLISDEDLKLL 468 Query: 429 KHFLATAFIRQQPERFFSA--PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 + + ++ + N + +++ + +L+ + ++ + Sbjct: 469 FNKSKSLNKKKTNFSCLKEYIKQDLIFVNEMMNNRENLFQMTGKKLIEKGYVNDFFLTSL 528 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV-LIACAAADAR 545 RE G + +A+PH ++ R+ + L + + + IN V +I A D Sbjct: 529 SEREVLGGTDLPIGVAVPHGKTKDVRKSFITIVKLDKKIHWKDYKINLVFMIGIAQEDIH 588 Query: 546 HELKIFSYLASILC-QHPAEIIAGLTGYEAFMELLH 580 +I S + +++ + + + + ++L+ Sbjct: 589 LTKQIISNIYNLISDEQILTQLRQVKTSKEVEDILY 624 >UniRef50_B0KCW5 Transcriptional antiterminator, BglG n=9 Tax=Thermoanaerobacter RepID=B0KCW5_THEP3 Length = 680 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 101/637 (15%), Positives = 219/637 (34%), Gaps = 97/637 (15%) Query: 2 LNERQLKIVD-LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L RQ I+ LLE+ P +L++ VSGRTI+R+I +N L + + Sbjct: 4 LTVRQKFILKTLLEKGPSNREDLSKLMDVSGRTIMREIASINNNLKKYKAVIVEDNGQII 63 Query: 61 LEIFERR-----------SFFQLLQKHDNDDRL-LALLLLNTFTPRAQLASALNLPETWV 108 L+ E LL + + LLL A + N+ E + Sbjct: 64 LKGEEEALDKIHASLGAIPLQWLLTPEQRQILMTIQLLLSEEPIKAAYFSYQFNVVEGTI 123 Query: 109 AERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDP------------- 154 + L ++++ + R L R G G ++ +E + + L Sbjct: 124 SLYLDKIEEWLKMRNLSLIRRRGYGIKVEGSELDKRNAIVELFYNYKPIEELLAFVYNDE 183 Query: 155 ------------------FLIPLAGITRDNL--QHLSTACDNQHRWPLMQGDYLSSLILA 194 L+ N+ HLS L+ Y + + Sbjct: 184 KDNYVYTFFSTVFDNELVQLVKRIAQQIKNVIHGHLSDLNYFGMFVHLLVSIYRTKIDKP 243 Query: 195 IYA----LRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD 250 I +++ L + D +++I++ + ++L D + L + + + + Sbjct: 244 IQLNDEFVKDILLSNEFIFMKD-VEKILKENEVYLPDAELAYLALHLSPKKYVYKQNRFE 302 Query: 251 NVQGLLQ--------RVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 + LQ V + ++ I D QL+ ++ H L + + + Sbjct: 303 ELGISLQDLSKEVVEEVSRLLNIKINCDEQLIVGLSQHFEPALYRLTMGLQTTNPLVEEI 362 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSD 356 K + F L+ + ++ + + + I ++ A+ER Q + + ++ + Sbjct: 363 KNYYGDLFKAVNKACKLIFSKYNLMIPEEEIGYITMHIGAAIERQQALSKKLRVFVICPN 422 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 A I ++ I ++ E + + ++ L+D +N I V Sbjct: 423 GIGTARILSAKLKTLFREVDAIDIGAIWEYKKKGDNYDLIIST----VKLEDLKDNVIVV 478 Query: 417 KNIITAAGIEQIKHFLATAFIRQQPERFFSAP---------------GSFHYSNVRGESW 461 +T I++++ F+ ++++ E + P + V ++ Sbjct: 479 SPFLTEEDIKKVEEFIEKYVVKKEKELPGNLPMVERRRNFEIADEILRNLQLKYVEAKTI 538 Query: 462 QHITRQICAQLVAQHHITADEAQR----IIAREGEGENLIVN-RLAIPHCWSEQERRFRG 516 + + + I L + ++A+ I RE G +I N +A+ H S++ Sbjct: 539 EDLIKFIAKDLY--DLMLTEDAKEIEELIKKREAMGNVVIPNTHIALIHTRSDKMVMPFV 596 Query: 517 FFITLAQPVE-----VNNEVINHVLIACAAADARHEL 548 L P++ + E ++ L+ A E+ Sbjct: 597 GVYKLKTPLKMKSAGFSYEEVDTFLVMLARKAESSEI 633 >UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A809_9CLOT Length = 721 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 104/679 (15%), Positives = 236/679 (34%), Gaps = 123/679 (18%) Query: 2 LNERQLKIVDLLEQ----QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--- 54 ++ RQ +I+ LL Q +P T E+A++ +S RT+LRD+ + L+ F Sbjct: 6 ISSRQKEIILLLAQNTSNKPITISEVAKELNISTRTVLRDMTKIESWLDENDFKFIKKPG 65 Query: 55 ---------GSAGYQLEIFERRSFFQLLQKHDNDDRLLALLL-LNTFTPRAQLASALNLP 104 S + +E+ + + K + +L+ LL + L + Sbjct: 66 VGIYLDETLDSKQFIIELLQEEKIEKSYTKEERKKFILSNLLTSSEPIKSYYFYKTLKIS 125 Query: 105 ETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLL---RKDPFLIPLA 160 E + +++ + + L +PG G +++ +E+ L+ ++ LI + Sbjct: 126 EGTLNNDFIEIEEWLDNFSIKLIRKPGTGIYVEGSEKDMRSAQVRLIYNSFEEQELIDIV 185 Query: 161 GITRDNLQH---LSTACDNQ------HRWPLMQGDYLSSLI------------------- 192 +N+Q + + +N+ + LS I Sbjct: 186 KNVGNNIQKHNVIEISSENRLLNLIDKSIIKKVENSLSETIKDINLKISDSAFIGLVVHI 245 Query: 193 -LAIYALRNQLTDEWPQYPGDEIKQIV--------------EHSGLFLGDNAVRTLTGLI 237 LA+ LRN T Q +E+K I E D L Sbjct: 246 SLAVQRLRNGETISMEQDVLNELKSIEQFKTATKIAQQIEEEFDIKVPIDEIGYITMHLR 305 Query: 238 EKQHQQA---QVISADNVQG------LLQRVPGIASLNI-IDAQLVENITGHLLRCLAAP 287 + + S D+V+ L++ + D +L+ ++ H+ L Sbjct: 306 GSKLRLETKNHNFSLDDVELMNIAKRLIELATDEFGFDFSTDKKLLNDLVNHMAPSLCRI 365 Query: 288 VWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD---IPLFDSDLIGLYFACALERH 344 + R +N +K + +D + I +++E+LD IP + + ++F +ER+ Sbjct: 366 KMGMDIRNPLLNQIKTEYKDIYDGVANIIYIIKEKLDIDNIPESEIAYLAMHFGSCMERN 425 Query: 345 ---QNERQPIILLSDQNAIATINQLAIERDVLNCRVI-IARSLSELVAIREEIEPLLIIN 400 + E + + + +++ N +++ ++ ++ LII+ Sbjct: 426 LIEEVEIRAVACCPTGIGTSRFLMTQLQKKFSNLKMVDTVSAIKIDEKALKDEGIDLIIS 485 Query: 401 NSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT----AFIRQQPERFFSAPGSFHYSNV 456 + + V ++ + +I+H L ++ F G+ + +N Sbjct: 486 TVEM---ETSIISVVVSPLLNLEDVAKIRHVLRKLAKDKVFKRDIRAFKEKQGNKNQNNQ 542 Query: 457 RGE-SWQHITRQI--------------------CAQL----------VAQHHITADEAQR 485 +G+ + + C L A + +A + Q+ Sbjct: 543 KGQLKKDEVMNFMIMSGNIVEFFKSIEVHEDVDCDDLEELINYSSFIFANNSKSALQIQK 602 Query: 486 IIAREGEGENLIVNR--LAIPHCWSEQERRFRGFFITLAQPVEVN--NEVINHVLIACAA 541 + R V+ +A+ HC +E+ R I L+ + ++ N+ + + Sbjct: 603 DLKRRINISTPFVDGIDIALLHCMTEEVENIRYASIRLSNEIMIDKENKTKYALFMLIPK 662 Query: 542 ADARHELKIFSYLASILCQ 560 ++ ++ S ++ L + Sbjct: 663 EAQTYQRELLSNISENLIE 681 >UniRef50_C6D7L7 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7L7_PAESJ Length = 687 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 107/679 (15%), Positives = 228/679 (33%), Gaps = 113/679 (16%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 ++ R +I++LL + T ++A++ VS RT+ R++ + L + +G Sbjct: 3 ISSRSRRILELLLRNDHDLTAAQIAEEIQVSSRTVHRELAAVEEILRAEGARLLKKSGSG 62 Query: 59 YQLEIFERR--SFFQLLQKHD-----NDDR----LLALLLLNTFTPRAQLASALNLPETW 107 +L+ + QL+ + ++R L LL LA + Sbjct: 63 IRLQGEQAALDRLAQLVSVSEEIEFSPEERQIYLLCLLLESEEPVKLFTLAHEFKVTIPT 122 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK-------------- 152 VA L L Q +R L R G G + EE ++ ++R Sbjct: 123 VANDLDDLDQWVQRFEVTLTRRRGYGIELTGQEEHLREMIRQIIRDRFEDTELISSRNEL 182 Query: 153 -----DPFLIPLAGITR-------------------------DNLQHLSTACDN---QHR 179 D L+ + G + D L LS A Sbjct: 183 PAHSLDRRLLAIVGQSEMEAVEKILWSWEEYGGSRLSESAYTDLLIRLSIALRRIRAGKT 242 Query: 180 WPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEK 239 + L A+Y +P E I D+ ++ Sbjct: 243 VEASSVEALRQESDAVYLTERLAALTERTFPPSETAYIGRLLRSVQSDD-----LSVLPA 297 Query: 240 QHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSM 298 ++ D V+ L++ + D L + + HL L R + Sbjct: 298 DD----LVLTDTVRSLIEYAQHAMGADYNKDRSLRDGLFLHLKDALQRLNEGTNIRNPLL 353 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNER---QPIILLS 355 + +K + + F++ + + +P + + ++F +LER + R + I++ S Sbjct: 354 DQIKKDYASLFNVVRKAANRVFTDMVVPDEEVGFLVMHFGASLERLKQLRQNVRAILVCS 413 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 + + Q+ +++++ ++ S E ++ L+I L + YI Sbjct: 414 SGIGSSKLLQIRLQKELPEIHIVDRVSWYEASRTEKDKYDLIISTVDLPLNGE---QYIK 470 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQ--------------------------PERFFSAPG 449 V ++T A ++++ F+ T I+++ + S Sbjct: 471 VSPLLTQAETDRLRVFVQTGLIQKRDGALTKEEKAVSEASTFEQLVSLKTTLDEMVSLIR 530 Query: 450 SFHYSNVRGES--WQHITRQICAQLVAQHHITAD--EAQRIIAREGEGENLI-VNRLAIP 504 F ++ +S I + C + A+ +T A+R++ RE G +I +A+ Sbjct: 531 RFEVIQIKEKSGVLPVILEEACTREEAKGVLTNSGLVAERLMQREQSGSQMIPGTAVALF 590 Query: 505 HCWSEQERRFRGFFITLAQPVEVN----NEVINHVLIACAAADARHELKIFSYLASILCQ 560 H E+ R L P+ + + + + +L+ + L++ S ++++L Sbjct: 591 HTRGEEITRPSLSLYRLEDPLTLEMASPSRLSHFLLMLAPRTLTKEALEVLSEISAMLLD 650 Query: 561 HPAEIIAGLTGYEAFMELL 579 + + L Sbjct: 651 TVMIDLLEAGNEAEIRDYL 669 >UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4E8_9FIRM Length = 654 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 98/649 (15%), Positives = 218/649 (33%), Gaps = 83/649 (12%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNG-KARIFASGSAG 58 +++R +I+ L + QP T +LA++ VS RT+ +DI LN L A I A G Sbjct: 19 ISDRLEQILIALGEASQPLTSAQLAEKVKVSARTVKKDIGELNAILKDYDAAILARTGVG 78 Query: 59 YQLEIFERRSFFQLLQKHDN-----------------DDRLLALLLLNTFTPRAQLASAL 101 YQL + + + Q L + + + LL ++ + L L Sbjct: 79 YQLSVGDEFLYNQFLTELKRRELRTAQTVPKYRYERVNYIVKKLLTVDYYLTIEDLVDEL 138 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEE-KRVILLANLLRKDPFLIPL 159 + + + L +++ ++ L SRP G + E KR+ + + Sbjct: 139 YISRSTLTADLKEVREIFKDYNLELISRPNYGILLVGEEIAKRLCIAEYFFHANVSTGYF 198 Query: 160 AG-----ITRDNLQHLSTACDNQHRWPLMQGDYLSS---------LILAIYAL------- 198 A ++ N + G ++S +I+AI Sbjct: 199 AADNAMFVSSTNQDEIRFVRGLLEEIMEKYGIHMSDQSLQNFVIHIIIAIRRWKFYNYVK 258 Query: 199 ---------RNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH-QQAQVIS 248 R+ + EWP D ++++ + + L + + +H + I+ Sbjct: 259 IEDENLGELRSSVAREWPA-AQDLVRRLQDKLEILLPQEEILYFALHFKSKHITELDEIT 317 Query: 249 ADNVQG-------LLQRVPGIASLNIIDAQLVEN-ITGHLLRCLAAPVWIAEHRQSSMNN 300 ++ ++ + + + + I+ E + H+ +A R + + Sbjct: 318 SEEIEQVEKTLYDIYRMLQKRFGVIAINKDRYEEYLRMHIPAMVARLRSGLVMRNPMIYD 377 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLY---FACALERHQNERQPIILLS 355 + + +++ +L + ++ + ++ + LY R + ++ Sbjct: 378 FLNKYLFSTHITMMISDILEQNFNVRMNKNEFAYLVLYTNLLFSTESRPHGAKILVVCGR 437 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 + T+ E +I + EL + + LI++ V + Sbjct: 438 GRPETITLINEINENHAALANMIEICDVGELE-NHDLHQAELILSTVPLQASYPVPSIYM 496 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 + I+Q ++ R+FS + +++G + R++ Sbjct: 497 DGRLSYGEQIQQ--SIKHNRLSFRKLARYFSPR--YFNGSLKGSVRDEVFREVAKAFDNW 552 Query: 476 HHITADE--AQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVIN 533 I A A+ I++ E + ++ L + + L +P+ N Sbjct: 553 KEILAMFWEAEHILSHETTKGVVFLHTL-------KPLPESFIYIGFLKKPIIWNKLWAQ 605 Query: 534 HVLIACAAADARHELKIFSYLASILCQHPAE-IIAGLTGYEAFMELLHK 581 V+ L++ S + P E +T YE +E+L K Sbjct: 606 AVIFVNIN-GDLDSLRLGYDFISEMINDPREPFSGKITEYEDLIEVLSK 653 >UniRef50_C3RLU7 Predicted protein n=2 Tax=Bacteria RepID=C3RLU7_9MOLU Length = 640 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 83/603 (13%), Positives = 194/603 (32%), Gaps = 73/603 (12%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNG-KARIFASGSAG 58 +N+R +I+ L++ T L+ VS +TIL+DI LN + I + S G Sbjct: 1 MNKRNYQILKYLKETEEYVTSETLSAMNNVSTKTILKDIKSLNCDMKATDNYIEVTPSRG 60 Query: 59 YQLEIFERRSFFQLLQKHDNDDR------------LLALLLLNT-FTPRAQLASALNLPE 105 +L I + F L ++ + + L+ N + L L + + Sbjct: 61 IKLVINDIEEFINLCNSFNDTNDFSIYSVTEREEWIQKYLIENNGWVKAEALCEKLFISQ 120 Query: 106 TWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEE-KRVILLANLLR------------ 151 + +++ + +++ +++ L +P G ++ E KR+ L + Sbjct: 121 SVLSQNIKSVRKAFQKYDLILLQKPHYGMRVEGREFNKRLCLAQIYITHIDQREGFPGTQ 180 Query: 152 ---KDPFLIPLAGITRDNL---QHLSTACDNQHRWPLMQGDYLSSLILAIY--------- 196 + LI D + +S + + + + L + I+ Sbjct: 181 FNNDELQLILKIEDIVDRILTRYQISMSEVSVQNFIIDIYISLKRIKKGIFLKSTDKMVI 240 Query: 197 --------ALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS 248 + +L E+K S A R + E H+ + Sbjct: 241 DIARWTDSIVAVELAKLINDELTIEMKDQEIVSLSIHL-AAKRIICHFDESIHRIIEDFD 299 Query: 249 A-DNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 V ++ + +++ D +L + HL+ + ++ +K Sbjct: 300 VNKLVNNMINNINCKWGIDLTQDEELKSQLVLHLIPLEVRSRYNVVLHNPLIDKIKQQNI 359 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATIN 364 A+ M++ + L + + I L+ AL R Q + + IL+ T + Sbjct: 360 FAYQMAVTACDQFSDYHGNRLSEDEMGYIALHMNLALLRTQIKNKKNILVVSGLGRGTAH 419 Query: 365 QLAIERDVLNCRVIIARSLSELVAI----REEIEPLLIINNSHYLLDDAVNNYITVKNII 420 LA + + + I ++ + + I L+ I V Sbjct: 420 TLAYQIKEMYGKYINEVKTADYIELNNYDFTNINLLISSIPLRRDFSVPS---IEVNYFF 476 Query: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 + ++I+ L + + + +++ ++ + I Sbjct: 477 SDNDKKRIETILCDQEVFKMRDYI---DKRMVLTSINADTKEEAISFIINSTN----YDK 529 Query: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFR-GFFITLAQPVEVNNEVINHVLIAC 539 + Q II + + + N ++I L++P+ N + + +++ Sbjct: 530 NIIQEIIENDKVANHELDNMISILSLNGISANNQTEVIIGILSKPILWNEKRVQLIIVPL 589 Query: 540 AAA 542 Sbjct: 590 IGE 592 >UniRef50_D1AP53 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AP53_SEBTE Length = 645 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 93/649 (14%), Positives = 214/649 (32%), Gaps = 74/649 (11%) Query: 1 MLNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 M N + I LL+ T ELA+ VS +I +I + L S G Sbjct: 1 MKNLVKKIIRTLLDVHDYMTADELARIVNVSVSSIKHNIKDVREELKKYDIELLSIPRKG 60 Query: 59 YQLEIFERRSFFQLLQKHDNDDR-----------LLALLLLNTFTPRAQLASALNLPETW 107 + L+I + LQ+ DN + L L N+ A L + + Sbjct: 61 FCLDIDNSQRALT-LQEIDNANSPDSFSFRKNYILDTLFQYNSVYTIQLFADELYVSRSI 119 Query: 108 VAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEK-RVILLANLLRKD--------PFLI 157 + + L + E L + G I+ E R ++ + ++K P + Sbjct: 120 IRKDLQYITNILERHDLTLMKKRNYGIVIEGNEFNIRQAMIEHNIKKYSVSDSFELPEDL 179 Query: 158 PLAGITRD-----------NLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW 206 ++ ++ + TA + S L Y + + + + Sbjct: 180 DRRFDSKKYSYFRNTYENIDMSKILTAVQKLEEELDITFSDDSFYQLLEYIIVSLIRMKN 239 Query: 207 PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLL-------QRV 259 ++ + + A +++ + ++ S L+ + Sbjct: 240 EKFITSQKPESSLELNESCFTAARNLFNSIVKAETAGLELESTYLAARLMVYRTCTSNIL 299 Query: 260 PGIASLNIIDAQLVENITG-----------HLLRCLAAPVWIAEHRQSSM--------NN 300 I + + I G HL+R +AA I + R ++ Sbjct: 300 SSNKYYKNIAKKFISGIGGVIGETTLSQKNHLIRDIAAFYEIIKFRNDYQIITWNDIHHD 359 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDL--IGLYFACALERHQNERQPIILLSDQN 358 +K + + + M L + + ++L++ D+ I L + ++ +++ + Sbjct: 360 IKERFASLYGMCLAQLHDIEDELNVDFTQDDVAWIVLLLHNTIVETVKSKEAVLITASDK 419 Query: 359 AIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKN 418 + + ++ V +++ ++P LII + +NN + Sbjct: 420 QTSRYMANKLMEKIMGLDVKEISHYKN-FKMKKSLKPPLIITT----VALNINNSAFISK 474 Query: 419 IITAAGIEQIKHFLATAFIRQQPERFFSAP---GSFHYSNVRGESWQHITRQICAQLVAQ 475 + IE I+ + F + ++ + + +IC ++ + Sbjct: 475 EVNEDDIELIQKKIGEKFYDEIISSNIFEEVFHRELVLCDLYAKDKKDAISKICNLMMEK 534 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE--VIN 533 +++ ++++ RE + I +++AIPH + + ++ + L PV E V Sbjct: 535 GYVSEGFEEKVLERENKTPTSIGSQIAIPHVFKDCVKKTAIAAVRLKYPVLWCGEDKVKI 594 Query: 534 HVLIACAAADARHELKIFSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 +L+A K+ L + + + + E ++L K Sbjct: 595 ILLMALDINSKNKMKKLLQKLYTFIDNPEKQVHLLDVENSEEMFQVLLK 643 >UniRef50_B0NYU6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYU6_9CLOT Length = 640 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 105/636 (16%), Positives = 214/636 (33%), Gaps = 65/636 (10%) Query: 3 NERQLKIVDL--LEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY- 59 NE ++ ++ Q + LA + VS +TI DI LN L + G Sbjct: 7 NENRIAVILRNIEMQSVCSVESLAAKLDVSQKTIRNDIKELNCLL--GGYACIGNNKGIC 64 Query: 60 QLEIFERRSFFQLLQKHDNDDRLL------------ALLLLNTFTPRAQLASALNLPETW 107 +L +F + F ++ K + L L+ L+ + + T Sbjct: 65 KLIVFAPKGFTEIRNKIYKQEDLFNSSHTRMAYMFWQLMHAEEPYLTDDLSEEMKVARTT 124 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGITRD 165 L RL++ E+ + + G + E K R+ +L N+ + PL I R+ Sbjct: 125 TISDLNRLRKAIEKYDLKIKGKANTGLALCGDEYKIRLFILENIYEQLYLNFPLGQIIRE 184 Query: 166 NL----QHLSTAC-----------------DNQHRWPLMQGDYLSSLILAIYALRNQLTD 204 L + LS ++ H ++ Y + Y + ++ + Sbjct: 185 KLYDFQERLSMDALGFGFFYRFFVVMIQRMESGHTIKKLEPKYEELYGSSAYMIVDEFLN 244 Query: 205 EWPQYPGDEIKQIVEHSGLFLGDNAV--RTLTGLIE-KQHQQAQVISADNVQGLLQRVPG 261 E Q G +I + LFL + RT E +Q AD + +L R+ Sbjct: 245 EIEQVKG---YKISKEERLFLSISVAGMRTPANTAEIEQKISISEGVADLIIEILDRIKA 301 Query: 262 IASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLRE 321 ++ ++ +L ++ H+ + + +++ K + A+ M+ +L E Sbjct: 302 ELNVTVVANELFDDFVYHVFFMINRLKYGFHIYNPMVDDFKNKYSVAYKMAEIAKGVLEE 361 Query: 322 QLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVII 379 ++ I + + + + YF L + E + + + I +L + V Sbjct: 362 RVGIEMTEDEMGFLAAYFGVFLLEQEPEEKRCKIAIVCGSGKIIGRLIENQLKKVFDVEP 421 Query: 380 ARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQ 439 + + I + L D I + + I+ + F ++ + Sbjct: 422 EFEFFYGIFDENRKDDFDYIVTTTELHMDTKTPVIFMDEVFDREYIQ--RKFENMRYLSE 479 Query: 440 QPERFFSAPGSFHYSNVRGESWQHITRQ----------ICAQLVAQHHITADEAQRIIAR 489 S N+ E+ + Q + L Q + A AQR+ R Sbjct: 480 AGRTIRKGIDSLFM-NLLDETRFFVLDQESSYDENVDRMARALTNQGELDAGFAQRVRER 538 Query: 490 EGEGENLIVNRLAIPHCWSEQER---RFRGFFITLAQPVEVNNEVINHVLIACAAADARH 546 E ++ +A PH + + F L N +I + I + D Sbjct: 539 EKYSTMVLDQNIAFPHTKNMLSKLTLAMGVFPDMLKDDKYGNIRIIILLGIPESMEDDTV 598 Query: 547 ELKIFSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 ++++ + SI + I + Y F+ + + Sbjct: 599 LVRLYDDILSIGKKPDVIPKIQKMESYREFLLYIAE 634 >UniRef50_B6G892 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G892_9ACTN Length = 499 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 66/466 (14%), Positives = 134/466 (28%), Gaps = 41/466 (8%) Query: 92 TPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFI---DETEEKRVILLAN 148 LAS L + E + + R + + G+ + D R + Sbjct: 1 MQLVDLASELAVSERTIQRHITRTNEELSDLAHIERLNQGGYRLVIEDGEAFSRYLDGHA 60 Query: 149 LLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ 208 P L+ C + L +L A++ R ++++ + Sbjct: 61 TSPAMPE-----SPDERVYYLLNDLCTREDWVT------LDTLAGALFVSRRTVSNDLRE 109 Query: 209 YPGD-EIKQIVEHSGLFLGDNAVRTLTG--LIEKQHQQAQVISADNVQGLLQRVPGIASL 265 ++ S + G T L + V G+L V Sbjct: 110 VEKRLASFRLTLESKPYRGIRVTGTELDKRLCLASTPLITDGVWNVVAGMLDAVYQAYRF 169 Query: 266 NII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD 324 + D +L N+ H+ L + +++ +P A+ M++ L++ Sbjct: 170 DFRNDLELRMNLARHVAPLLVRLSYGLSVDNPLTEDIRMRFPLAWSMAVDASQALQQMSG 229 Query: 325 IPL--FDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIER----------DV 372 + ++ I L FA A+ER + +L + A +L R +V Sbjct: 230 ATVDMAETGYIALAFALAIERAGSSPSKKNILVVCASGAGSARLLEYRFKQQFGRYLNEV 289 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 L C + S I+ + + V + + A + L Sbjct: 290 LTCDIAAVASCDW-----SAIDYVFTTVPLEAEIPVPV---CQISAFLDANDAGYVLEML 341 Query: 433 ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGE 492 T F + +V G S + ++ + + + + RE Sbjct: 342 QTPAASCLLPYFSP---ELFWPHVEGSSKDEVLTKMLDAVGVVKGMGDEFKASVRERERI 398 Query: 493 GENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA 538 N +A+PH L + + N + V + Sbjct: 399 APTAFGNLVAMPHPVRACSDEPFVAVGLLDERIMWNAHEVQAVFLI 444 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 14/146 (9%) Query: 22 ELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQKH----- 76 +LA + VS RTI R I N L+ A I GY+L I + +F + L H Sbjct: 5 DLASELAVSERTIQRHITRTNEELSDLAHIERLNQGGYRLVIEDGEAFSRYLDGHATSPA 64 Query: 77 ---DNDDR---LLALLLLN-TFTPRAQLASALNLPETWVAERLPRLKQRYERT-CCLASR 128 D+R LL L + LA AL + V+ L +++R L S+ Sbjct: 65 MPESPDERVYYLLNDLCTREDWVTLDTLAGALFVSRRTVSNDLREVEKRLASFRLTLESK 124 Query: 129 PGLGHFIDETEE-KRVILLANLLRKD 153 P G + TE KR+ L + L D Sbjct: 125 PYRGIRVTGTELDKRLCLASTPLITD 150 >UniRef50_Q5WJN3 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=Q5WJN3_BACSK Length = 634 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 91/618 (14%), Positives = 204/618 (33%), Gaps = 64/618 (10%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSA 57 ML+ RQ ++ L + T LA+ VSGRTI D+D ++ L + Sbjct: 1 MLSSRQKSVLTKLLRSNHYVTIEFLAKWQNVSGRTIRYDLDAIDDMLKQAGAPLKREPGK 60 Query: 58 GYQLEI--FERRSFFQ-------LLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 G L + +R F+ K+ + + +++ QLA +L + + Sbjct: 61 GVFLHVGEEKRAELFRIAEGHQVFFDKNVHIAMMSLFAIMHETVTIQQLADEFHLSRSSI 120 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGI----- 162 + LP +++ +R LA + G ++ TE + + L + Sbjct: 121 QKYLPDIEETLDRFGLQLARQARKGFLVNGTERSIRRAIFHWLTDKQVDLERVERWFDCE 180 Query: 163 ---TRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE------ 213 R + +C + +G I + L + P +E Sbjct: 181 KDGGRGQIDRWLRSCQEDRQVFYSEGSLRVLTIFLCWWYERILHGHYVYIPQEEREAGHR 240 Query: 214 -------IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG-------LLQRV 259 + + ++ + TL G + + + ++ Q LL+++ Sbjct: 241 LGELSEVVSALCDNRTAEHEHAFLNTLLGQAKVVSYKNDAVLGESYQKEKDFCTSLLEQI 300 Query: 260 PGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 I +++ D +L+ ++ H+ +K + A ++M Sbjct: 301 STILQVDLLKDKKLMNDLLYHMKAAFLRIEQGLVIDNPYTEEIKVRYRAIYEMVHQITAD 360 Query: 319 LREQLDIPLFDSDLIGLYFACALERHQNER---QPIILLSDQNAIATINQLAIERDVLNC 375 + L + I ++ + +R +++R I++ S A ++I +++ Sbjct: 361 MGYTL--VAAEVAFITMHVSAGFDRSKSKRFLPTVIVVCSTGLATSSILTTKLQQAEPGF 418 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT-VKNIITAAGIEQIKHFLAT 434 +I + +L EE + ++ + + I V ++ I+H Sbjct: 419 HLINVVNTEDLEKALEESDVDFVLTTQELPIKQWNDTKIFRVSPLLNDEDKRTIQHEAQK 478 Query: 435 AFIRQQPERFFS--------APGSFHYSNVRGES--WQHITRQICAQLVAQHHITADEAQ 484 R+Q F P F + + W+ A L+ +I Q Sbjct: 479 MINRKQLACFNQVYAHASAVEPTLFDETVHTANTSDWKESIALAAAPLLKAGYIRQGYVQ 538 Query: 485 RIIAREGEGEN--LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN---EVINHVLIAC 539 +I + + ++A H E + ++ + E + V++ Sbjct: 539 EMIMSVERNGTYMVFLPKVAFVHAGPENVIKEGISMTIFEHEIDFGSFNPERVEVVIVLA 598 Query: 540 AAAD-ARHELKIFSYLAS 556 + L++F YL + Sbjct: 599 IKEAHNQDFLQLFRYLET 616 >UniRef50_B6W9F2 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9F2_9FIRM Length = 621 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 84/618 (13%), Positives = 218/618 (35%), Gaps = 52/618 (8%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIF 64 R L+++++LE+ + L ++ +S +T+ D+ LN + A + L ++ Sbjct: 9 RSLQLLEILERSSISEELLLEKLEISKKTLSNDVKQLNKKMQNCAFVNLKD-KKLSLFVY 67 Query: 65 ERRSFFQLLQKHDNDDR-----------LLALLLLNTFTPRAQLASALNLPETWVAERLP 113 + + + + + ++ L LN L+ + + +T + + + Sbjct: 68 DYNLYKRCVNIIKKEGESFNNEKYRLIYIIGYLFLNDTANMGDLSFEMMISKTTLNKDIE 127 Query: 114 RLKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLLR------KDPFLIPLAG---- 161 +L + ++ +P +G + E R ++ N K+ ++ Sbjct: 128 KLNNLIKDYRLKISGKPNVGICLQGEELDIRNFVIENCYYEIIKENKNTKIVSKIIKDIL 187 Query: 162 ----ITRDNLQHLSTA-------CDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYP 210 I D ++ + + H + +Y + + N + + + Sbjct: 188 SPYLIDEDTIEKMKMFLNVSISRINKGHNIENLSDNYAYDSNKFSFDIAN-ILRDKVSHM 246 Query: 211 GDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDA 270 D + E + + +RT + + D ++ + + L + Sbjct: 247 FDIVLSHEELKFITVPIRGMRTPLITNKISDIKIGDEIYDLIEEIFMAIKKRMDLEVDLG 306 Query: 271 QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDS 330 ++ + T H+ L + + S + +K + A+ M+ ++ ++LD + +S Sbjct: 307 KVKKEFTYHIYFLLNRIKLDYKIQNSLNDEIKKEYRVAYKMAEIASKVIEDKLDKKINES 366 Query: 331 D--LIGLYFACAL-ERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELV 387 + + YF + E+ + ++ IN +++R + + S+S L Sbjct: 367 EKSYLASYFQIYIVEKLDLINKNSFKIAIYTT-DEINGQSLKRKLKSMSPGNDLSVSILD 425 Query: 388 AIREEIE--PLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFF 445 +I + L+I N + ++ I IE ++ ++ + F Sbjct: 426 SIDLNLNSFDLIITNKDIDTDINQISGEEAYNFAIIKERIENLREKKNLVLNKRFLKSVF 485 Query: 446 SAPGSFHYSNV-RGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIP 504 + + GE + + L + I+ D Q++I RE + + +A P Sbjct: 486 LNELNDQKLFLLDGEDFNQNLIYMLDSLENEGLISKDFKQKVIDREKKSSTIFSKSVAFP 545 Query: 505 HCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILC-QHPA 563 H + + +T+A + + L+ +K++ + +I ++ Sbjct: 546 HAKANK--------LTVALGINEKSYPKLIFLVGLPENLDEILVKLYDEIVTIANDENLV 597 Query: 564 EIIAGLTGYEAFMELLHK 581 + I+ + Y ME K Sbjct: 598 DKISKIKSYPKLMEFFIK 615 >UniRef50_D0BN54 PRD domain-containing protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BN54_9LACT Length = 643 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 89/607 (14%), Positives = 201/607 (33%), Gaps = 75/607 (12%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR--------- 50 +N RQ+ +++ L Q+ P T LAQQ VS +TI DI +N L + Sbjct: 1 MNNRQMDLLNRLIQENEPVTGKVLAQQYLVSTKTIYNDISVINQYLKAFSSEIKKKPSMG 60 Query: 51 IFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 I+ Y+ ++ + Q K + + +LL+ +L + E+ + Sbjct: 61 IYIEIDEKYKEQLKKTFQTSQKTNKQNEECKLLSTFMLKNEVDILDCSIENFTSESTIRR 120 Query: 111 RLPRLKQRYER--TCCLASRPGLGHFIDETEEKRVI---LLANLLRKDPFLIPLAG-ITR 164 + L++ + + + + E ++ LL+ L+ + + G I + Sbjct: 121 EVHELEKEINKNGIKLIKHQGKISLDGLEDNIRKFFRNKLLSGLIHFNLAGLSNYGCINQ 180 Query: 165 DNLQHLSTA------------CDNQHRWPLM----------------QGDYLSSL---IL 193 + +Q + C + LM Q + L S I+ Sbjct: 181 NRVQEIIQIMNHLLEKYKFSVCYEYRHYLLMDLIIFDIRWKNGYFIEQQNDLDSNNPKII 240 Query: 194 AIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQ 253 Y L L +E E + I L N T +E Q V Sbjct: 241 ETYLLARDLLNEVSGKEVAEKEIISLSQSLITIGNYENT---YLESNAQIE-----KTVD 292 Query: 254 GLLQRVPGIASLNIIDAQLVENITG-HLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 + V +A ++ + + H+ + + M +K + ++ Sbjct: 293 EFIALVGELAGIHFEQDDYLRGMLINHIPAMIMRLRNKIHLKSDLMEEIKYQYGVLYNFV 352 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIER 370 + + ++ L D++ L+ ++ ++E+ + ++ A + + + + Sbjct: 353 WLSGKVFKNNFNVELTDNEAALLTIHLEISVEKIKKPMNIYVICPHSLATSELLLNQVRK 412 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 I S+ ++ L+I + L++ YI V I+ + +I+ Sbjct: 413 ITGQFEHIHKVEYSKASSLDVRENDLVISSVE---LENISFPYIHVGTIMKEEDLLKIQR 469 Query: 431 FLATAFIRQQPERFFSAPGSFHYSNV-------------RGESWQHITRQICAQLVAQHH 477 + + Q F + + +++ + S +I ++ Sbjct: 470 KFLASTMEQTQYNFLTKNDEEYTNHLIKKLLGKSIYIREKVSSVDKCLSKIIQLANEKNL 529 Query: 478 ITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLI 537 + + I RE G +A+PH ++ +TL +P+ ++ V++ Sbjct: 530 ENINFEKTIRHRENLGITSTYTGIALPHANPKEVHTSELIMMTLDKPIYWGQNLVKVVML 589 Query: 538 ACAAADA 544 Sbjct: 590 IAITEKD 596 >UniRef50_B9Y7S9 Putative uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7S9_9FIRM Length = 335 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 112/328 (34%), Gaps = 12/328 (3%) Query: 259 VPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 V + S+++ + H+ + +R +K P +D+++ Sbjct: 4 VSQLYSIDLKHESFIIPFGLHIKALITRASLGKYNRNPLSEKIKQDCPIIYDIAIFIALR 63 Query: 319 LREQLDIPLFDSD--LIGLYFACALERHQNERQP---IILLSDQNAIATINQLAIERDVL 373 L E + + + + I L+ ++R + ++L SD + + +D Sbjct: 64 LSEIYQVAIAEDEVAFIFLHVGTEIDRQNSSNDKLKCVLLCSDYLGLEKKIYAQLTQDYA 123 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI-EQIKHF- 431 + I A S R+ + L+ + + + + I E+I Sbjct: 124 DEITIDAVVSSYEELERQTFDLLITMIQDERNYNYPSLLILPFQLDKQKNEIREKIYEIQ 183 Query: 432 -LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE 490 + + + P F + S + + +++C ++ A +++A + RE Sbjct: 184 QVKKKELIFNHFDHYFHPELFFV--IENGSREDVIQKVCDKMEALGYVSASFKTFVKERE 241 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKI 550 + +AIPH + + + N ++N +L+ + L Sbjct: 242 NASSTAFGS-IAIPHSVHMDAYQTKIGIAVSRSGITWGNNLVNIMLLIAINKYDKQILLT 300 Query: 551 FSYLASILCQHPAEIIAGLTGYEAFMEL 578 + L ++P EI++ + + E Sbjct: 301 INESILSLFENP-EILSRVKNTSSLAEF 327 >UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9M5_9FIRM Length = 698 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 102/690 (14%), Positives = 223/690 (32%), Gaps = 123/690 (17%) Query: 1 MLNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARI-FASGS 56 ML +++ + LL + P ++A Q GVS RT+ R+++YL+ L + Sbjct: 1 MLLTNRIRGILLLLMDAEGPLKEDDIADQVGVSRRTVQREVEYLDGALREYGLLLHRKKG 60 Query: 57 AGYQLEIFERR--SFFQLLQKHD---------NDDRLLALLLLNTFTPRA--QLASALNL 103 G + E+ L++ + +RLL L+ PR + L + Sbjct: 61 VGISVTGSEQAKERLRGELEEKEAGEPTDVAGRRNRLLFELI-RDKVPRKIYYYSQLLGV 119 Query: 104 PETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETE------EKRVI------------ 144 E + + + L E L R G G + +E +R + Sbjct: 120 SEATINKDMSALGPWLEQNHLKLVKRQGFGVALSGSERDLRAAMRRYVSENMSLPWAGIE 179 Query: 145 ---------------------LLANLLRKDPFLIPLAGITRDNLQ------------HLS 171 L + + + ++ L+ HL+ Sbjct: 180 GLKESAAGALIHTRDQNLYALLATDTVSRVYEVLARMRKEETRLKGLAESAYTNLIFHLA 239 Query: 172 TACDNQHRWPLMQGDYLSSLILAI---YALRNQLTDEW-----PQYPGDEIKQIVEH--- 220 A + + +++ D L YAL ++ E P E+ I+ H Sbjct: 240 IAVERVKKGAIVEEDPGLVNKLGTWDEYALAGKIRGEIEREFSIHMPDQELSYILLHLLG 299 Query: 221 SGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGH 279 S + + L ++ + + ++ + + ++ D + + + H Sbjct: 300 SKMAYHETEAENRQFLFPEEDLL------EIIDRMIDQFDTEMANSLKCDEEFIRGLIMH 353 Query: 280 LLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYF 337 L + + +K +P + S ++R++ + D + + ++F Sbjct: 354 LQPAMFRMSEKMSIYNPVLPEIKREYPEIYAKSRRAAEVIRDETAFEVSDDEIGFLSMHF 413 Query: 338 ACALER---HQNERQPI---ILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIRE 391 A+ER + +R+ + I+ S +A + + R + A +LS+L E Sbjct: 414 GAAVERVRKREGKRRRVSIGIICSSGFGVAQLMIARLTRVFGQEAELSAYALSDLTEHVE 473 Query: 392 EIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFI--RQQPERFFSAPG 449 + + V ++ + +E+I++ + R+ + F Sbjct: 474 RRTDFFVTTFDWCADEIDSIR---VSPMVPESDLEKIRNKIEEYAYVKRESENQVFDRQL 530 Query: 450 S-----------FHYSNVRGESWQHI-----TRQICAQLVAQHHITADEAQRIIAREGEG 493 E+ I Q+ ++ + A +I RE Sbjct: 531 DQANEMIIEIRGLIRRYCDYETDPKISFPDLVYQLADRVTESQAVAEKIAGKIQRREHLN 590 Query: 494 ENLIVN-RLAIPHCWSEQERRFRGFFITLAQP---VEVNNEVINHVLIACAAADA--RHE 547 + LA+ HC S R + + + + I V+ D R Sbjct: 591 SQIFPELDLALLHCRSRMIREPVFISCRPSGDRSFADPDFKGIRAVIFMVMPEDEQLRMH 650 Query: 548 LKIFSYLASILCQHPAEIIAGLTGYEAFME 577 ++I +++ + + A + A L G E ++ Sbjct: 651 MQILGQISASVIRDEAFVGAILHGDEELVK 680 >UniRef50_B3WBC3 LicR (Transcriptional regulator) n=1 Tax=Lactobacillus casei BL23 RepID=B3WBC3_LACCB Length = 505 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 148/360 (41%), Gaps = 21/360 (5%) Query: 237 IEKQHQQAQVISADNVQGLLQRVPGIASLNIIDA----QLVENITGHLLRCLAAPVWIAE 292 + +Q +S+D Q +++ + I +D L ++ HL+ + + + Sbjct: 149 GKSDYQNDDYVSSDINQFIVKALDEIKEKFDVDFTQEIDLRISLALHLMPLITRMKFNIQ 208 Query: 293 HRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ---NE 347 + + ++ ++ ++P AFD++ + LL++++ + +S+ + +YF L R+ Sbjct: 209 NSNALLDQIRKSFPLAFDIAAYMGLLLQQKIGQKVKESEISYLAIYFNQYLIRYNDLSGS 268 Query: 348 RQPIILLSDQNAIATINQLAIERDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLL 406 ++ +++ + + + + + + N V+ ++S+L I + ++ + L Sbjct: 269 QKVLVVTNLKRSESVLLRQRFATWFNNEISVLTMVNISDLQDIAVDDYDVIFTTEQNDLT 328 Query: 407 DDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITR 466 D V I + + +IK F ++ +P F Y+N+ S + + Sbjct: 329 D--VLGAILISYFPSENEYSKIK-LAIDGFKTKEEILNLFSPDRFDYTNLS--SKDKVLK 383 Query: 467 QICAQLVAQHHITA--DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP 524 Q+ L Q + + + RE G + +A+PH S I L QP Sbjct: 384 QLMQ-LSRQAAGDRTTEMDKAVRLREELGSSYFGGTVALPHPVSPLPIATFVSVILLKQP 442 Query: 525 VEV--NNEVINHVLIACAAADARHELKIFSYLASILCQHP-AEIIAGLTGYEAFMELLHK 581 + + ++ +++ + ++++YL I+ E + ++ F++ L + Sbjct: 443 INWDADGNKVDLIILVAIEKNNAKVFQLWNYLGKIIQDPTFVERLKKQPTFDYFIQELSQ 502 >UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 Tax=Anaerococcus RepID=C2BGB6_9FIRM Length = 698 Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 92/654 (14%), Positives = 208/654 (31%), Gaps = 80/654 (12%) Query: 1 MLNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGS 56 ML++R+++I+ L + + T E+ G S +TI +I+ ++ + I A Sbjct: 41 MLSDREIRIIKFLYKNKDKYCTSTEIGYNVGFSEKTIRTNINLISENVPKNIFEIVAKKG 100 Query: 57 AGYQLEIFER--------------RSFFQLLQKHDNDDRLLA-LLLLNTFTPRAQLASAL 101 +G++L I + + Q+ K + +L LLL N L L Sbjct: 101 SGFKLVIGDHDKYIDYIYKSKASMSNLDQIYDKKGREKYILENLLLENKALTFDDLLEIL 160 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + E+ + + L+ + + + I E ++ + + + Sbjct: 161 FVSESTLQRDIYSLRNKLKDYGLDIVKDDNSYLSISGKELEKRHFILDFFFSSIYSNSFI 220 Query: 161 GITRD-NLQH-------LSTACDNQHRWPLMQGDYLSSLILAIYAL-------------- 198 D NL H L D + + DY ++ +AL Sbjct: 221 NELEDLNLFHKATISQLLIILLDEIREYGISVNDYAIQNLVIHFALVIERVKINCLIDNY 280 Query: 199 ----RNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG 254 DE+ + I++I + + L + + + + + + S + + Sbjct: 281 DKDIAKGEGDEFLDFAKSVIRRISKSFAIDLPIEEKKYIYLQLLSKTKLSSENSIKSFKD 340 Query: 255 ------LLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 LL+ + ++N++D + N HL + +K + + Sbjct: 341 YNQVIDLLRYLSKKLNINLLDDNVFMNNFIEHLKALENRVASGLYISNPLTDKIKTQYTS 400 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ-NERQPIILLSDQNAIATIN 364 FD+ + ++ + D + + +Y ALER++ N++ ++++ + Sbjct: 401 YFDLVVDSFKKFSIFENMDITDDERSYLVIYILSALERNKFNKKINVLVVCASGFSTGLM 460 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPL-LIINNSHYLLDDAVNNYITVKNIITAA 423 ++ + I + + ++ + LII++ + V + Sbjct: 461 LKNRIQNEYTNTINIKNVIGYYEITPKNLDDVDLIISSVDLEGLVIAVPSVKVSVFLDED 520 Query: 424 GIEQIKHFLATAFI----------------RQQPERFFSAPGSFHYSNVRGESWQHITRQ 467 I + E++FS N + + Sbjct: 521 DCALIDKEVEKLIKSYQDLRSDEQIVPNTNLTLFEKYFSEKNFLINKN--PCTKDEVLNL 578 Query: 468 ICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV 527 I L + + + RE G + +AIPH S + + F + + Sbjct: 579 IYKSLALTPEMEEIFRDQTLLRENFGSIVFKTLVAIPHPISPIKDKAEIFTVISKADISW 638 Query: 528 NNEVINHVLIACA---AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMEL 578 + ++ + KI IL +I L E F++ Sbjct: 639 GKDSDKLKIVFYISPPGKNDPDFEKIIKVFTKILKDDS--LIQALINIENFIDF 690 >UniRef50_C6VNI0 Sorbitol operon transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNI0_LACPJ Length = 621 Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 97/606 (16%), Positives = 217/606 (35%), Gaps = 61/606 (10%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 ++ + +I++ T EL VS TI ++I +N L G A+I A + Sbjct: 1 MDRQSFEILNFFINNDALTLRELQSHFSVSRVTITKNIRAINDYLVGIAKINV-NQAKFY 59 Query: 61 LEIFERRSFFQL--------LQKHDNDDR---LLALLL--LNTFTPRAQLASALNLPETW 107 L I + +L L +D R +L LL + + LA +L + Sbjct: 60 LVINNYSAMAKLQTNFLKKDLDFNDPSKRQVTILKELLQQITDYVILDDLAESLAVSRGT 119 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLL-------------RKD 153 + + L LKQ+ + + ++ G + + ++ L D Sbjct: 120 INKDLKALKQQLDYYQVRIETKTNRGIHLAVEHDYMYAVITRTLVGKYYELEATWDKATD 179 Query: 154 PFLIPLAGITRDNLQHLSTACDNQH--RWPLMQGDYLSSLILAIYALRNQLTDEWPQYPG 211 L+ L N ++ N W ++ I + L + +T + Sbjct: 180 VKLLNLVKKLDHNNDTVTMFKRNIAVINWLRKYNIQINDRINNYHPLLSDVTMASLRNLV 239 Query: 212 DEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA---DNVQGLLQRVPGIASLNII 268 EI + + + + L + +Q QV D +Q + + +N+ Sbjct: 240 TEIIGSSLSTSEWEFISYPLNIRKLPKDDNQLVQVGLVEVEDLMQSVFPILKQKLDVNLD 299 Query: 269 DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPL- 327 +L+ + HLL + ++ + ++ + +P + +++ ++ + +L+I + Sbjct: 300 FKRLLMELRYHLLFLINRAIFDVKSEGFISVDMLSKYPVSTELAQLTLSTIATKLNIRIR 359 Query: 328 -FDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSEL 386 + + +YF LE + ++ + IN + + I+ L E+ Sbjct: 360 SQEVGYLTVYFQMELEEYMAAP----IIHRVALVEPINT--------SMKKFISEKLKEM 407 Query: 387 VAIREEIEPLLIIN----NSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQ--- 439 + +I+ I+ + L N+++T +I A I ++ +R+ Sbjct: 408 LDDDLQIDVFNSISEWEQSPEKYLLIFSNSFLTDNELINHAPIIRLNSIFNQGTLRERLQ 467 Query: 440 ---QPERFFSAPGSFHYSNV-RGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 E F + E++ +++ Q + +T D Q + RE + + Sbjct: 468 ISLVDEAVNQGQCRFDVTQFDEQETYVTGVKKLINQEIQHGQLTPDFMQAWLNREQQSSS 527 Query: 496 LIVNRLAIPHCWSEQ-ERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL-KIFSY 553 + + +A+PH + R +PV +N+ +N V + L KI + Sbjct: 528 IFGDGVALPHVIDKSGLNRILVTVGVFEKPVVFDNQKVNVVFLVAIPYKLDATLSKILAQ 587 Query: 554 LASILC 559 + ++ Sbjct: 588 VYDLIR 593 >UniRef50_C0X3N3 Regulator of sorbitol operon n=23 Tax=Enterococcus RepID=C0X3N3_ENTFA Length = 620 Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 96/602 (15%), Positives = 202/602 (33%), Gaps = 60/602 (9%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L R +++ LL + EL ++ S +T+ ++ID LN L G A +Q Sbjct: 3 LVNRWYQVIKLLVDHKGMSLQELQEKLAASPQTVRKNIDTLNDELIGIA-QIIQKENLFQ 61 Query: 61 LEIFERRSFFQLLQ-----------KHDNDDRLLALLLLNT-FTPRAQLASALNLPETWV 108 LEI F ++L ++ L+ F L+ L + V Sbjct: 62 LEINNFEGFEEVLSGRLKRESDFNSSSKRVSYIIKRLIEEDQFISTYDLSEELAVSRGTV 121 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 + + R+K+ + P G ++ E +L N +++ L T+ + Sbjct: 122 NKDIKRMKELIAPWQVAVVGTPNRGIHLEGKEFDLRLLHVNYVQEYFEEQFLHETTKQMI 181 Query: 168 QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYP------------GDEIK 215 Q + + Q +L +++I R + P +E+ Sbjct: 182 QKII-----KETRLAKQDSFLLRRVVSIVLQRVLAGKLITELPPEYVDYVRHNEQIEELM 236 Query: 216 QIVEHSGLFLGDNAVRTLTGL---IEKQHQQAQVIS-----ADNVQGLLQRVPGIASLNI 267 +E + R+ I H + +++ AD Q +++++ + Sbjct: 237 YHLEITYNVTLSQWERSFISFPFNINTNHIRNSLLTDEGLLADYFQKMMKKIHHSVVVEF 296 Query: 268 IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS----LHFITLLREQL 323 + L + HL + V+ E ++ +P A++++ LL Sbjct: 297 DEDFLFSEMKDHLRNVMNRLVFHVECHDLFYGEIERQYPLAYELAKIGLQELGRLLNRC- 355 Query: 324 DIPLFDSDLIGLYFACALERHQ---NERQPIILLSDQNAIATINQLAIERDVLNCRVIIA 380 +P + + LYF AL + +++ ++ S + A I Q +E VL V IA Sbjct: 356 -VPTVEFGYLALYFELALRGNYEAGAKKEIAVICSTGHGTALIIQRQLE-KVLGPDVQIA 413 Query: 381 RSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ 440 E RE + I I + N+ + + IR Sbjct: 414 HFSEEEAERRELNQYFAIFTTIPLKNIRPQTPMIHLTNLFNDTWLR--NEWQRAKEIRSV 471 Query: 441 PERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNR 500 + + + +++ A L A+ + +RI RE + + + Sbjct: 472 ESQNIHMTYQLLENTQGYRAN---IQKMIADLEAEKLVDPQFIERIFTREDQQTTIFESG 528 Query: 501 LAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD-----ARHELKIFSYLA 555 +A PH ++ + + ++ +L+ + L+++ L Sbjct: 529 IAFPHTINQALSTIILSIGVFEESLVTPEGKVDVILLLGIPEELTATVEAELLQLYDRLF 588 Query: 556 SI 557 +I Sbjct: 589 TI 590 >UniRef50_UPI00017890F3 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017890F3 Length = 689 Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 116/679 (17%), Positives = 220/679 (32%), Gaps = 104/679 (15%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 + RQ +I+ LL + T E+A GVS RT+ R+++ + L G + G Sbjct: 6 ITARQRQILLLLMSRTDGMTAAEIAADVGVSVRTVHREMEEIEKDLQGTGVVLLKKSGTG 65 Query: 59 YQLEIFERRSFFQLL---------QKHDNDDRLL---ALLLLNTFTPRAQLASALNLPET 106 +LE + L + ++L ALL + LA +L + Sbjct: 66 IRLEEEKPEGLSLLRRSLLAGKPADYSVEERKILMLCALLEADEPIKLFALAHSLKVTVP 125 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 V+ L L+ +R L R G G ID E R + L + L G Sbjct: 126 TVSNDLDELEPWMKRFNLKLIRRRGYGIEIDGAEGVRRRAIGRLAEEYLDYSDLVGDGYS 185 Query: 166 NLQHLSTA-----------CDNQHRWPLMQGDYLSSLILAIYAL---------------R 199 + + TA D + M D+ L + Y R Sbjct: 186 DTREPVTARLLSMIDKPALLDVEKTLWDMNWDWTEDLSESAYTSTLIALSVSVNRIKRGR 245 Query: 200 NQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH-QQAQVISA--------- 249 + YP + VE +G F+G E + AQ+ A Sbjct: 246 GMEAADIAGYPPSPVS--VEEAGDFVGRLGETLEMNFRESEMIYIAQLFEAAKNMSEVSE 303 Query: 250 ---------DNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMN 299 + L++RV G + D L + H+ L R ++ Sbjct: 304 LVHADVEMVEIAHRLIERVQGRTGIPFQEDRTLRAGLVEHIGAALKRIREGTRIRNPLLS 363 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALER---HQNERQPIILLSD 356 ++ + F + + L+ L IP + + ++F + ER ++ + I++ S Sbjct: 364 PIRKDYEELFGIVRRSVDELKLDLSIPDEEIGFLVMHFGASSERLNQPEHHLKAILVCSS 423 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 + + + + +++ V+ S E I +E L+I L + Y+ + Sbjct: 424 GLSSSRLLGTRLNKEMPQIEVLGNVSWYEAARIPKEQYDLIISTID---LPLPKDRYVRL 480 Query: 417 KNIITAAGIEQIKHFLATAFIRQQPERFFSAPG--------------------------- 449 ++TA E + F+ + R + Sbjct: 481 SPLLTADDKEALLRFIQSTSFEPASSRAAVSRIEEDRKAASFERLRMQAALMNEIVSLLD 540 Query: 450 --SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR--IIAREGEGENLIVN-RLAIP 504 ++ + Q + ++ Q + E + ++ RE G LI + LA+ Sbjct: 541 GFHVYHLDNLQNDLQGTLNEALVKVYEQGALRDAEMVKERLLERERMGTQLIPDTTLALF 600 Query: 505 HCWSEQERRFRGFFITL--AQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHP 562 H S L P+E + +L+ + L++ S ++++L + Sbjct: 601 HTRSRYITWPSLSLFRLAHQAPLEDGAQAGVILLMLAPKQLPKESLEVLSEISAMLLRSE 660 Query: 563 AEIIAGLTGYEAFMELLHK 581 + G E L + Sbjct: 661 LIELMERGGEEEIRSYLAE 679 >UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P4U6_9CLOT Length = 640 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 100/644 (15%), Positives = 228/644 (35%), Gaps = 71/644 (11%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA- 57 ML RQ++++ LE++ T ELA++ +S RTI D+D + ++ Sbjct: 1 MLTTRQIELLKYLEKREEYTTTKELAEEFSISSRTIRNDLDAIEYSTKDLPIKIERTPRL 60 Query: 58 GYQLEIFERRSFFQLLQKHDNDD--------RLLALLLLNTFTPRAQLASALNLPETWVA 109 G +LE E+ +L +D + + +L+L T QLA + + + + Sbjct: 61 GIRLEFLEKVGLDSILYTNDMKEYSRDERAVVIAMMLILTDKTTIEQLADQMEVSKNTLV 120 Query: 110 ERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDP--------FLIPLA 160 E L ++ +E L + G I EEK ++ N+ K +I Sbjct: 121 EDLNSVEALFEYYGITLERKSYYGLTISGDEEKIRNMVFNIYLKITKQKTINLDEIIKEY 180 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE------- 213 + ++ + + D + L I N+ D + Sbjct: 181 TVIKEEIPEEIIYKIEDNERIKYSDDSVKELKNMILITLNRAFDGFYMGADTGYLRGREK 240 Query: 214 ------IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNV---------QGLLQR 258 I++I++ + + + + + L+ + + D + Q L+Q Sbjct: 241 PDNFQIIEEILKREEIQVTEGDILYMIMLLNASKKIKGISLEDTIEDRKIMMATQSLIQE 300 Query: 259 VPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 I +++ I + I HL + E M ++K + ++++ + Sbjct: 301 FCRITKIDMKIGQDISTQIMMHLKVAIYRLKNHIEIENPLMEDIKYSSLFVYEITKKILR 360 Query: 318 LLREQLDIPLFDSD--LIGLYFACALERHQNER---QPIILLSDQNAIATINQLAIERDV 372 D+ +++ +YF + + N I++ + + A + + + V Sbjct: 361 EYEAMFDVVFPETEIAYTTMYFETLFQENYNMNFTVNVIVVCNSGLSTAVLLKQRLHMIV 420 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 VI +S+++ E I P II+ ++ I V ++ A + I+ L Sbjct: 421 PELNVISTCRVSDVIKEAENINPDFIISTVPLKMNQ--YKVIEVNPLLNAEDVNVIRRNL 478 Query: 433 ATAFIRQQPERFFSAPGSFHYS-------------NVRGESWQHITRQICAQLVAQHHIT 479 ++ E + H N++ W+ + L+ ++I Sbjct: 479 TNLSYNRRNEHLAKQMEAIHKMPMEELFQKDCCKFNLKISDWKEAVQVAADPLIQYNYIQ 538 Query: 480 ADEAQRIIAREGEGEN--LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV---INH 534 + II N + + +A H E + LA+P+E + + Sbjct: 539 KEYVDDIIKIIQTIGNYMVFIPEIAFVHAPPEHVNEDHMSLLKLAKPIEFGTKSKVDVKV 598 Query: 535 VLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMEL 578 +++ + + ++ +++ L + + + +T Y+ E+ Sbjct: 599 IIVIASKEENKNLVELMQIL---MKEDNVAKLKNVTNYDDIREI 639 >UniRef50_B1C8U8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8U8_9FIRM Length = 664 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 92/610 (15%), Positives = 196/610 (32%), Gaps = 77/610 (12%) Query: 21 GELAQQTGVSGRTILRDIDYLNFTLN------------GKARIFASGSAGYQLEIFER-R 67 ELA+ VS +T+ D +N L G+ ++F Y +E + Sbjct: 22 EELAKYYDVSQKTLQNDFSDINTFLKEINIPQLTVLKSGEIKLFDKKFDEYTIEKLNKLG 81 Query: 68 SFFQLLQKHDNDDRLLALLL-LNTFTPRAQLASALNLPETWVAERLPRLKQRYER-TCCL 125 + +++K + + ++ +LL + F QLA L + + + + + + + Sbjct: 82 NIQYIMEKKERVNLIIIILLKESKFITMNQLAEKLCVTRITILNDMIEVNLKLNKYNIEV 141 Query: 126 ASRPGLGHFIDETEEKRVILLANLLRK------------DPFLIPLAGITRDNLQHLSTA 173 S+PG G E L+ +LL + + I L +N S Sbjct: 142 LSKPGKGIIAAYDEYDARCLITHLLFDSYHSNERESNISNVYFIKLIKEIENNYTLESLK 201 Query: 174 CDNQHRWPLMQGDYLS----SLILAIYALRNQLTDEWPQYPGD------------EIKQI 217 + D+ + +++ +++ + N+ ++E + EI +I Sbjct: 202 NILDEIIIDKKYDFRNRGYYAILFSLFVILNRRSNEITYIEENKRYSNKEYDIAKEIYEI 261 Query: 218 VEHSG-LFLGDNAVRTLTGLIEKQHQQAQVISADN-------VQGLLQRVPGIASLNIID 269 + + N + L G I + +I+ D+ V L ++ +++ D Sbjct: 262 LTKKLDIIPNKNDIHYLAGFISNKDILKPLINVDDYVELHTTVATFLYKISEQLDISLYD 321 Query: 270 A-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF 328 L E + HL LK + F I L+ + + + Sbjct: 322 EYSLFEFLIKHLNAMAMRIKNEELLINPIYEQLKEKYDYVFKAVKENIRLIEDFYKLKID 381 Query: 329 DSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSEL 386 ++ I ++ +ER + + +L QL + I +++ Sbjct: 382 KNELSYIVMHICAEIERETTKMRKPSILIVCPESMAAGQLIAAQLEKYFDFNIKAIITDS 441 Query: 387 VAIREEIE---------------PLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 I + + P+LIIN D I I +++ Sbjct: 442 YEISDNLNIDFIISTVVLPRLKYPVLIINTIIDAEDYNRIQTIIFSLIKDYKKLKKSIEN 501 Query: 432 LATAFIRQQPERFFSAPG-SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE 490 + + R + + S SW+ + RQ L+ + + D + +I Sbjct: 502 KESLTLPGIKHRLYQSINPSLIKITDDITSWEEVLRQGGDLLINAGYASKDFSDDLIKSA 561 Query: 491 GEGENLIV--NRLAIPHCWSEQER-RFRGFFITLAQPVEVN---NEVINHVLIACAAADA 544 V + + H S+ L V+ N N+ + + Sbjct: 562 NLNGPYFVIRKGVGLAHALSKDSNYESAISLTVLKNGVKFNHPYNDPVKLLFSLVIKDSK 621 Query: 545 RHELKIFSYL 554 + L IF+ + Sbjct: 622 SY-LNIFNDV 630 >UniRef50_B0MEI2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI2_9FIRM Length = 642 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 97/638 (15%), Positives = 223/638 (34%), Gaps = 66/638 (10%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG---- 55 + ERQL++V L++ T G+LA+ VS R+I D+D + + L Sbjct: 1 MTERQLQLVKYLQECDGYTTAGKLAEVFHVSSRSIRNDLDAVQYYLKELPVEIERTPRLG 60 Query: 56 -----SAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 G+ + + ++ + + + LL+++ QLA L + + V + Sbjct: 61 VRLIVKKGFDITSLYSSNEIKVHSREERVIIITVLLMISEKVTIEQLAEKLQVSKNTVVQ 120 Query: 111 RLPRLKQRYE-RTCCLASRPGLGHFIDETEEK-------RVILLA--------NLLRKDP 154 L ++ + L + G + EE+ I A ++L+ Sbjct: 121 DLRPAEEFLKKHEVRLIKKSYYGMSLKGEEEQIRNTLFNLYIKTASEGSLNILHILKDHA 180 Query: 155 FLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAI---YALRNQLTDE------ 205 + P AG + + + + I + +R + D+ Sbjct: 181 EVDPEAGRNMIRRVEAAMGIRFADESIGELESMILASLCRIRCGFHVRGRTLDDADGVCR 240 Query: 206 ---WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGI 262 PG ++ + + L + R +E + +V+ A Q + + + Sbjct: 241 EAILSGLPGFQVTKGDLSYFVMLFQSTKRMDGESLENWDEDGRVMQATE-QLIRKFCSDL 299 Query: 263 ASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 + ID ++ I HL + + + M ++K + ++++ + E Sbjct: 300 KISSEIDPEIQRQIMMHLKVAVFRLKNKIKIKNPLMEDIKYSHSFMYELTERLLKGQEEM 359 Query: 323 LDIPLFDSD--LIGLYFACALERH---QNERQPIILLSDQNAIATINQLAIERDVLNCRV 377 L + D++ +YF + + + +++ A A + + I RV Sbjct: 360 LGVVFPDAEIAYTTMYFEVLFQENFSLNLSPEVVLVCGGGTATAVLLKQRISEYFPELRV 419 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT-AF 436 +S++ E P II+ L + I V ++ + I+++K+ ++ A+ Sbjct: 420 RKICRVSDVEEETERNRPDFIISTVPLSLRN--QQVIHVNPLLNSPDIDRVKNIISVLAY 477 Query: 437 IRQQP-------ERFFSAPGSFHYS-----NVRGESWQHITRQICAQLVAQHHITADEAQ 484 R+ + G + + W+ C L+ + + + Sbjct: 478 NRKNQYLVHRIHQTMQRGIGDLLKEEYCRFDAETDDWKEAIAMACEPLIKNGLVKPEYVE 537 Query: 485 RIIA-REGEGE-NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE-VINHVLIACAA 541 +I + G + + +A H + R + L P++ ++ ++ +I Sbjct: 538 EMIHIVQNLGNYMVFIPEIAFVHGRKDNVRENCISLMKLKHPIDFGSKAKVDVKVIIVLG 597 Query: 542 ADARHELKIFSYLASILC-QHPAEIIAGLTGYEAFMEL 578 +E + L IL ++ E I ++ YE + L Sbjct: 598 NITENEN--LADLVRILAWENNMERIKHISSYEELLSL 633 >UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbiobacterium thermophilum RepID=Q67LZ9_SYMTH Length = 634 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 88/631 (13%), Positives = 185/631 (29%), Gaps = 91/631 (14%) Query: 27 TGVSGRTILRDIDYLNFTLNGKARIFASG-SAGYQLEIFERRSFFQLLQK---------- 75 G R++ D++ L + S GY LE + + L + Sbjct: 1 MGYPARSVRYDLELLCDWVAAHGARLVSTAGVGYHLE-GDTDRVRRHLDRLMTGGPPPSE 59 Query: 76 -----------------HDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQR 118 D+ R L++L ++ + + L E+W + R L + Sbjct: 60 YIPSPRERIRRLLLMLLSDDAPRRLSVLADRLGVGKSTVHTDLATAESWASRRGLALARG 119 Query: 119 YERTCCLASRPGLGHFID--ETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDN 176 + C + P I E LA LL + P PL + R + +S Sbjct: 120 HAGICLRGAEPHWRRAIVDLVGELADEAQLAMLLEEHPDAAPLQALLRPLVPRVSWG--- 176 Query: 177 QHRWPLMQGDYLSSL------ILAIYALRNQLTDEWPQYPGDEI-----------KQIVE 219 GD L L I L Y D++ Q + Sbjct: 177 ------RLGDLLRELGAPELSICVAVMLSRLQAGHTLSYSPDQVSRGLSSPWGREAQAIC 230 Query: 220 HSGLFLGD----NAVRTLTGLIEKQHQQAQVISADNV---------QGLLQRVPGIASLN 266 + N L + + ++ + + V + Sbjct: 231 RALESRFGVRIPNTEAAWLALQLEATRAVNPAPGRDIVHPADLELAEQMAVLVETRLGIG 290 Query: 267 II-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 + D + + + HL ++ ++A +PAA + L + Sbjct: 291 LRQDREFLMGLALHLRPIAERLRRGEAVENPLLDEVQAKYPAACLAAQDVGRALSAIWGL 350 Query: 326 PLFDSD--LIGLYFACALE----RHQNERQPIILLSDQNAIATINQLAIERDVLNCRV-I 378 + + + + ++ A ALE R + + +I+ S + + I + + Sbjct: 351 TVPEPEIGYLAIHIAAALEREKLRRRTVPRALIVCSSGVGTSALLVTRIRSLLPEIQPGR 410 Query: 379 IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH----FLAT 434 + + + E+ L++ V V ++ + +++ + Sbjct: 411 VVSAFRVREVLAEDPHDLVVATCQVPPCGLPVVR---VSPLLGEDDVARVRRTVMALQSE 467 Query: 435 AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII--AREGE 492 A+ +QP +V ++W+ R LV ++ ARE Sbjct: 468 AWRGRQPVLSELLTAETIALDVDAQNWEEAIRAGGDLLVRAGLAEPRYVDAMVRTAREYG 527 Query: 493 GENLIVNRLAIPHCW-SEQERRFRGFFITLAQPVEV---NNEVINHVLIACAAADARHEL 548 ++ A+PH + R + L +PV +N+ + V+ A + H Sbjct: 528 PYIVLGPGFALPHARPGDGVLRLGMSLVRLRKPVPFGHPDNDPVRLVVCLGAIDNETHLK 587 Query: 549 KIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 + + E + + L+ Sbjct: 588 ALMELSELLANPQSVEALHTAADVAEVLRLI 618 >UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metabolism n=3 Tax=Bacillaceae RepID=B7GJR6_ANOFW Length = 691 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 118/680 (17%), Positives = 223/680 (32%), Gaps = 116/680 (17%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ++ R+ KI+DLL P T ++A+Q VS RT+ RD+ + AG Sbjct: 3 ISARERKILDLLLAHPKGITVKDVAKQLDVSERTVHRDLKGVEQVAEAYNLQLIK-KAGV 61 Query: 60 QLEI---------FERRSFFQLLQKHDNDDR----LLALLLLNTFTPRAQLASALNLPET 106 ++I + R F ++ ++R L+ALL LA+ LN+ Sbjct: 62 GIQIVGDEEKKHQLQMRVFRLSHTEYTPEERQTMILIALLESGEPVKLISLANDLNVTVA 121 Query: 107 WVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLL---RKDPFLI----- 157 ++ L +++++ E L + G G I +E + +++ LL + Sbjct: 122 TISNDLDKVEEKVEKHGLALVRKRGYGVEIAGSEAAKRKMMSELLFDHFDESQFFSFMKE 181 Query: 158 -------PLAGITRDNLQ------------------------------------HLSTAC 174 L + L HL+ A Sbjct: 182 SIQKKSTDLVNTVTEKLLGLVDKKKLFMIERQIEAMKDDLPFTIADSSYIALVIHLALAI 241 Query: 175 DNQHRWPLMQGD-------YLSSLILAIYALRNQLTDEW-PQYPGDEIKQIVEHSGLFLG 226 + + + D ++ + +L + + P +EI I H L Sbjct: 242 ERIMQGEAIHFDAQHLQTISMTKEYETAEKIAKRLEEVFHLVIPKEEIGYITMH----LM 297 Query: 227 DNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIID-AQLVENITGHLLRCLA 285 +RT G + ++ + Q L++ V +++ D L E++ HL L Sbjct: 298 GAKLRTHRGYMLEEASLEIAMKT---QELIRFVSEQIGVDLTDDYPLYEDLIVHLKPALY 354 Query: 286 APVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQ 345 ++ + + F + + + + +P + + L+FA AL R + Sbjct: 355 RIQHHMGITNPLLHKIMEDYSELFHVVQRGVRHVFSDMTVPEEEVGYLVLHFASALLRDK 414 Query: 346 NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYL 405 + +++ S A I +++++ + I +S ++ + E LI++ Sbjct: 415 QGIRALVICSSGIGTAKILATRLKKEIPDISHIEQKSFFDVQRVDVH-EYDLIVSTVPIH 473 Query: 406 LDDAVNNYITVKNIITAAGIEQIKHFLAT--------------------AFIRQQPERFF 445 Y V ++ + I+ FL T I E Sbjct: 474 TSHP---YFLVNPMLPEEEVTAIRQFLKTKAFSIRSQKVNSSKKGIENIRSIHVVSETIV 530 Query: 446 SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADE--AQRIIAREGEGENLIVN-RLA 502 F + S Q CA L I E + ++ RE G I N LA Sbjct: 531 HLLNGFSMRELSSYSLQDALMHACAHLEQHGVIRNKERVVEELLQREQVGGLGIPNTTLA 590 Query: 503 IPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHP 562 + H SE + TL P + +++ + + +L Sbjct: 591 LYHTRSEDVLQPSFTMYTLTHPQTIVGMDQQPMMLNRLLLLLAPKNAP-DDMLQVLSHVS 649 Query: 563 AEIIAGLTGYEAFMELLHKG 582 + II E MEL KG Sbjct: 650 SLIIKD----EESMELFSKG 665 >UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQV6_ALIAD Length = 674 Score = 94.5 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 109/632 (17%), Positives = 202/632 (31%), Gaps = 95/632 (15%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 L +RQ ++ L ++P P E A++ VS RT+ RD+ + L S Sbjct: 5 LTDRQKLLLFELVRRPEGVDPSEAARRLDVSRRTLQRDLRAVAGWLRPFRARIESQGGRL 64 Query: 60 QLEI--FERRSFFQLL----------QKHDNDDRLLALLLLNT-FTPRAQLASALNLPET 106 L E L L LL A L L+ Sbjct: 65 CLLASPQELGRIEAALGPVTARSAAVTPRQRAALLALWLLAEPGPLKLAYLGKVLDAAPA 124 Query: 107 WVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKD--PFLIPLAGIT 163 ++ L L R L R G G ++ +E R +A+++ + P+ + Sbjct: 125 SLSGDLNDLAPWLRARHLTLVRRQGFGVLVEGSEVARREAMADIVYEQISPYQLARMTTR 184 Query: 164 RDNLQH--------------------LSTACDNQHRWPLMQGD----YLSSLILAIYALR 199 +L H + A P+ + D +L ++I + A R Sbjct: 185 EGDLSHPVARWLVQFVQDPVLRAVADVVEAVLGAAEPPVEEADRFEVWLYAVIQCLRAAR 244 Query: 200 NQLTDEW----------PQYPGDEIKQIVEHSGLFLGDNA------VRTLTGL---IEKQ 240 L + + + + +GL R L GL ++ Sbjct: 245 RGLVRGTDLDEGARPGDVALAKELLSSVAKATGLPALSTEPEIRYMARHLAGLRVRLDDD 304 Query: 241 HQQA--QVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSS 297 + V + D ++ V I L D LV + HL L R Sbjct: 305 FRLLPSNVTALDLAHRFVRAVEDITRLPFASDHLLVSGLAQHLAPALDRVRAGLPIRNPL 364 Query: 298 MNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER--QPIIL 353 + +KA +P F + + + L D + + ++ + ER E + +I+ Sbjct: 365 LETVKARYPELFAAAESASREVFAPHGLRLPDEEIGFLAMHLGASRERRLAEEKWRAVIV 424 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNY 413 + A + + +++ S+ E+ + + + S L +A Sbjct: 425 CPHGLSSARLLASRVRKELPEI------SVQEVASAKSAAHLNADLVLSTVSLPEADVPV 478 Query: 414 ITVKNIITAAGIEQIKHFLA--TAFIRQQPERFFSAPG----------SFHYSNVRGESW 461 + V +T + ++ LA R PE + PG S S++R ++ Sbjct: 479 VVVSPFLTEEDLRAVRFVLAKLERPARTSPEPGEALPGASTWALRLASSARTSSIRAQTM 538 Query: 462 QHITRQICAQLVAQHHITA--DEAQRIIAREGEGENLIVNR-LAIPHCWSEQERRFRGFF 518 + + + LV Q + I RE G ++ R LA+ H ++ Sbjct: 539 DDVIQLVGLDLVRQGRASDAGPIVAAIERRERLGSVVLPGRQLAVLHARTDGIDGPFVGV 598 Query: 519 ITLAQPVEV-----NNEVINHVLIACAAADAR 545 L +P+ +E + VL+ A Sbjct: 599 YRLERPM-WTRGVGEDEPVAVVLVLLARVQED 629 >UniRef50_B2TRB2 Putative phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Clostridium botulinum RepID=B2TRB2_CLOBB Length = 628 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 86/633 (13%), Positives = 215/633 (33%), Gaps = 71/633 (11%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAG 58 LN+RQ I++ LE + T +A+ VS RTI D+D + + + G Sbjct: 4 LNKRQKDIINFLESKDEYVTIDCIAKFFEVSSRTIRNDLDSIEDLIKESNIILERKPRVG 63 Query: 59 YQLEIFERRSFFQLLQKHDND--------DRLLALLLLNTFTPRAQLASALNLPETWVAE 110 +L + + +++ + D ++ L++ +LA +++ + + + Sbjct: 64 IKLILKNGQDIQEVINEQDYKVYSSDDRITVIILSLIIKGKVTIEELAKDVDVSKNTLVQ 123 Query: 111 RLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQH 169 + + E ++ + G I + EEK + ++ K + D + Sbjct: 124 DFKLVTAKLEEYDIQVSKKTYYGITIKDNEEKIRNVFFSIYSKLSDELK-----HDIKER 178 Query: 170 LSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNA 229 L+ + + + + + I +Y+ + + + I ++ F D + Sbjct: 179 LTQETNLKDSVIKEKIEKIEKNIGTVYS-----EESIEELEIIILLSINRYNNNFKIDYS 233 Query: 230 VRTLTGLIEKQHQ--QAQVISADNV------------------------QGLLQRVPGIA 263 R LI ++ +++S D++ Q +L + Sbjct: 234 EREKNSLIRRREFSVLKEILSLDDLEICYLLKISDGSRRAVGGKVNNITQEILDELCKTL 293 Query: 264 SLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 +++ D + I HL + + +K + ++ ++ + Sbjct: 294 NIDCSNDLEFTSQIAMHLKVAIHRIKNNLVIENPMLEEIKYKMSFIYQITETILSSKEDI 353 Query: 323 LDIPLFDSD--LIGLYFACALERHQNER---QPIILLSDQNAIATINQLAIERDVLNCRV 377 + + + + + +YF ER+ + + +++ + A +++ ++ I + + Sbjct: 354 IGVKFPEEEIAYMAMYFDAIFERNIKSKFTYKILLVCNGGLATSSLLKVRIGAMLPELEI 413 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFI 437 L +L E + I++ D I V ++ + +++IK + Sbjct: 414 KNVCRLKDLDKELENTDIDFIVSTIPVKADK--YKVIKVNPLLDNSDVDKIKTEIYNKRY 471 Query: 438 RQQPERFFSA-------------PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ 484 + E P +V + W+ LV ++ IT D ++ Sbjct: 472 EKNCEYLIDLVKSDNESEIIKLLPQDVTQLDVDIDDWKEAIEIATKPLVNKNKITKDYSK 531 Query: 485 RIIAR-EGEGE-NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAA 542 II E G + + ++A H + +TL ++ ++ V A Sbjct: 532 EIIKVIENLGNYMVFIPKVAFVHATPDNVLENSMALLTLKSEIQFGSKNKVPVKAMVVLA 591 Query: 543 DARHELKIFSYLASILCQHPAEIIAGLTGYEAF 575 + + + + L I E Y+ Sbjct: 592 NKTENMNLVNLLEIITKGDNIEKFKNAANYDEI 624 >UniRef50_B9DJ28 Putative regulator of sorbitol operon n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJ28_STACT Length = 628 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 92/629 (14%), Positives = 213/629 (33%), Gaps = 56/629 (8%) Query: 2 LNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQL 61 LN++ K+V +L + + A + +S +TI I +N + L Sbjct: 3 LNQKHFKLVQILLKSNLPIDKAAVELDISEKTITNYIKQINREFEN-IFSIRKRDSLLVL 61 Query: 62 EIFERRSFFQLLQK------------HDNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 I + + F+ L K + +L L+ N + L+ L L T + Sbjct: 62 TIMDDQKFWDELNKDSFLNNDSESILTNRLGKLFYELITNDISLIDDLSEKLYLSRTALN 121 Query: 110 ERLPRLKQRY-ERTCCLASRPGLGHFIDETEEK-RVILLANL--LRKDPFLIPLAGITRD 165 + LK++ E + +P +G + E R + L + + L D Sbjct: 122 TLVTELKEKIKEYNLQIIGKPNVGISLKGKEIYIRKFAIEKLPKILNEEELPQPLNEKLD 181 Query: 166 NLQ-----------------HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ 208 NL+ ++ ++H++ + + N L Sbjct: 182 NLKNTMNLDTQTFFNLQNSIKITLLRLSKHKFIEKDSFKNTDTAIFKSNEFNTLNFLNEY 241 Query: 209 YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ-HQQAQVISADNVQGLLQRVPGIASLNI 267 + L + + L+E+ ++ + + + ++ V + I Sbjct: 242 ISQTYTSSTSNYELLLIAIQLLGRRASLMEEIINESDEKLIMKIINNTIRDVKRYFDIQI 301 Query: 268 IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ--LDI 325 + ++I H+ + ++ + + + +P AF++S + + L I Sbjct: 302 DENLFNKDIKLHIKHLINRLIFNIKLENNVSAEMDIQFPFAFELSKILGDSITKYTGLSI 361 Query: 326 PLFDSDLIGLYFACALERHQNE--RQPIILLSDQNAIATINQL-----AIERDVLNCRVI 378 + + +YF+ LE+ + I + ++TI L I ++ I Sbjct: 362 SKPELGFLTIYFSVYLEQLEQRFSDMKNIGIYTDGGLSTIKLLSSYLYKIFGKDISIEAI 421 Query: 379 IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI---KHFLATA 435 LS + + E + ++ + L + + IEQ K Sbjct: 422 EKADLSIVES---EYDFIISTQPLNRLFNKIIYIENVFNEKHFKLRIEQFLIYKDISNKE 478 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 + F F++ + + + + + + ++++ + + + Q II RE Sbjct: 479 VFNRSVILDFINERDFYHLS-DADDYYSVIQFLASEMIDEQRVDSKFDQTIIEREILKST 537 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAA--DARHELKIFSY 553 I + PH + + L ++ ++ +LIA + ++I+ Sbjct: 538 -INKAVGFPHA-THSMEGIQIKVALLDNTIKSYPDLKMVILIATPKTINNEALLIRIYEE 595 Query: 554 LASILCQ-HPAEIIAGLTGYEAFMELLHK 581 + SI + + I T +E F+ LL++ Sbjct: 596 VLSITKNMYLTKKITNQTDFEDFVYLLNE 624 >UniRef50_B6G1I6 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1I6_9CLOT Length = 641 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 104/637 (16%), Positives = 234/637 (36%), Gaps = 70/637 (10%) Query: 5 RQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI 63 R +I++++EQ Q T L+++ VS +TI DI +N +L G A I Y I Sbjct: 9 RLARILNIMEQKQSVTVDYLSEKMDVSPKTIKNDIKEINNSLEGHAIIENKR-NSYVFYI 67 Query: 64 FERRSFFQLLQK--------HDNDDRLLALL--LLNTFTP--RAQLASALNLPETWVAER 111 F+ + Q+ K + + R++ ++ L+NT P +LA +N+ + V Sbjct: 68 FDTDGYEQVKNKVYAHDDFMNSPNSRIVFIMQKLMNTDCPYLTDELAYDMNIGRSTVNGD 127 Query: 112 LPRLKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGITRDNLQH 169 L RL++ E + + G ++ E + R +L N+ PL D ++ Sbjct: 128 LKRLRKILEEYEIEILGKTNTGISLNGDELEIRFFILENMYDGIYKDYPLDSDLIDAIKQ 187 Query: 170 LSTACDNQHRWPL-----------------------MQGDYLSSLILAIYA--LRNQLTD 204 ++ + + + L I I+A + N ++ Sbjct: 188 IALEYELDSVAVEYFIKFFTVMIDRFLNGNPLSKLDKKYEELKESIAYIFAREIANNISK 247 Query: 205 EW-PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIA 263 P +EI I ++T+ L K+ + D + + ++ Sbjct: 248 VLMTDLPEEEILFISIPIAGMRTPTNIKTIEKLQVKKT------TEDLILKIKDKIKQEM 301 Query: 264 SLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR--E 321 ++NI Q++ H+ + + + R +K++ A+ ++ ++++ E Sbjct: 302 NINIQSEQIMHEFMYHIQFMINRMKYGFKIRGIDCEEIKSSNSVAYTVAEVAASVIQNEE 361 Query: 322 QLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNC--RVII 379 ++I + L+ +YF +++ E+ I ++ I+ +E ++ + Sbjct: 362 NIEISNEEIALMSVYFGILIDKSNLEKNKIYNIAIICGTGRISARVVESNLKKIIKNETV 421 Query: 380 ARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQ 439 S+ E ++ ++ ++ L D + I +K+++ + + K + Sbjct: 422 MDLYSDSNIDSEILDKYDLVVSTVKLDIDTKSEIIYIKDVLDRSEL---KRKIDLLKYSD 478 Query: 440 QPERFFSAPGSFHYSNVRGESWQHITRQ----------ICAQLVAQHHITADEAQRIIAR 489 E F + E+ + + + L + H+ A +RI R Sbjct: 479 NKEISFIKGMDSIMLGILDENRFFVLDKNYSYSENVNMMIDILENEGHLDAGFKERIRKR 538 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV-INHVLIACAAADARHE- 547 E + + + +A PH + + + + + E I V + D + Sbjct: 539 EEKSSMIFEDTVAFPHTINYASKNIELALGVVPENMSDKKEKDIKLVFLLGLPEDDGDDT 598 Query: 548 --LKIFSYLASILCQHP-AEIIAGLTGYEAFMELLHK 581 +KI+ + I E I+ + Y+ + K Sbjct: 599 VLVKIYDEIIKIASDKELVEEISKIENYKDLLMYFVK 635 >UniRef50_C9BPG8 Transcriptional antiterminator bglG n=7 Tax=Enterococcus faecium RepID=C9BPG8_ENTFC Length = 622 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 84/620 (13%), Positives = 201/620 (32%), Gaps = 51/620 (8%) Query: 2 LNERQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L R +++ LL + E+ ++ S +TI +DI LN + + ++ Sbjct: 3 LVNRWYQLLKLLVTHKKVSIQEVQKEIKTSNQTIKKDIGELNEEI-AGIAKIIQKNKHFE 61 Query: 61 LEIFERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 LEI++ F +++Q L L+ F L+ + + V Sbjct: 62 LEIYDFDFFDEIMQGKLKTASDFNSASKRIAYLLNRLIETEDFLRMDDLSEEVGVSRGTV 121 Query: 109 AERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLR-------KDPFLIPLA 160 + L LK+ + P G I E + +LL + + FL Sbjct: 122 VKDLKTLKEMINDFDVKITGTPNKGLRIIGDELELRLLLFYFVSPYFSETKTEQFLEEKQ 181 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQY----------- 209 I + Q + A + + I + Y L+ + + Sbjct: 182 AI--KHFQKKTNASKQEITLLTKVIGISLNRISSNYLLKKPINRYSGCFEYIQEFNELIN 239 Query: 210 PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIID 269 +EI ++ + + ++A ++ R+ + +++ + Sbjct: 240 QLEEIYELTLSQYEKDFISFPLNIINTSITMIRKANSDLRLYFDPMMMRIRRLDLIDLDE 299 Query: 270 AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFD 329 + L + + HL + ++ ++ +P ++ ++ I L L + Sbjct: 300 SFLYQEMKQHLSLLINRVIFRYRLTDLFYGEIEKKYPFSYQIASECIQALEAILQHKISK 359 Query: 330 SD--LIGLYFACALERHQNE--RQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSE 385 + + LY A + + + ++ + + +L + I E Sbjct: 360 VEISYLTLYLELAFRYQKEHFSSKKVAIVHTTGKGTALMIQRQIKRILGRDIQITHVSEE 419 Query: 386 LVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFF 445 + + + + I + N+ + + +++ F Sbjct: 420 QYEKVDLNKYFAVFTTIPLKNVNEETPVIHLTNLFDDSWLRA-----QWQKAKKKRLAGF 474 Query: 446 SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPH 505 + F+ +++Q +++ A L+ +++ + +RI+ RE + + A PH Sbjct: 475 HSTVFFYQIWKEKKTYQEYLKKLVAPLIRGYYVDEEFEKRILKREYQQSTFVNKEFAFPH 534 Query: 506 CWSEQERRFRGFF--ITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPA 563 ++ + IT E + + A E ++F L IL + Sbjct: 535 TTNQLSQHIVLSVGLITDQGLAETGGNGVIFLFAIPEEMTAEVENELF-ELYDILFELIK 593 Query: 564 ----EIIAGLTGYEAFMELL 579 E I E+F++L+ Sbjct: 594 MGIDEFIELAPTQESFLKLI 613 >UniRef50_B0A8M3 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8M3_9CLOT Length = 643 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 98/632 (15%), Positives = 223/632 (35%), Gaps = 59/632 (9%) Query: 5 RQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI 63 R K++ +LE + L ++ VS ++I DI LN +G A I Y+L + Sbjct: 10 RICKVLQILEHKRSASLEYLEKKLNVSTKSIKNDIKELNEIFDGNALIQFKLG-KYKLYV 68 Query: 64 FERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAER 111 E + F + + K + L+ LA +++ T + Sbjct: 69 LEYKQFEKTKENLYLHDDFFNSPKKRMAYVISRLMNDENPVLTEDLAFEMSIGRTTLVGD 128 Query: 112 LPRLKQRYER-TCCLASRPGLGHFIDETEEK-RVILLANL---LRKDPFL---------- 156 L ++++ ++ + + G + E R+ +L NL + KD L Sbjct: 129 LKKIREALKKYNIEIVGKTNTGLKLQGEEIDLRLFVLENLYEEIYKDHELDYDVKEELEK 188 Query: 157 ----IPLAGITRDNL-QHLSTACD---NQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ 208 + L G TR + + L+ D N H + Y + + N ++D Sbjct: 189 IFSDLKLEGSTRKQIIKFLTVLIDRLVNGHSIAELNETYEDLIYTDQINVSNNISDRIEN 248 Query: 209 YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII 268 G +I E + L +RT + ++ + D V +++ + + I Sbjct: 249 IFGVKIPD-NERVFMTLPIVGMRTPMDIDRVKNIEITEEVIDLVLDIIKLIKLEMDITIT 307 Query: 269 DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF 328 L++ T H+ L + + + ++ +K + + ++ L+ ++ + Sbjct: 308 PGNLLDEFTYHISFMLNRLKYGIKIKNPVLDEIKEKYMVPYKLAELTKMLIEDRTKKKVS 367 Query: 329 DSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIAR--SLS 384 + + +YF+ + + ER + ++ I I + I + S Sbjct: 368 KDELGFLAVYFSVFISENSYERNKLCSIAIICGTGKITARLIAAQLRKIVDIDTKLEMFS 427 Query: 385 ELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERF 444 + +E ++ ++ ++ D V I +K I ++ + + + Sbjct: 428 DSQVNKELLDQFDLVLSTIKFECDTVTPIIYLKEIFDENQLK--NKIESARYTEKLNIPM 485 Query: 445 FSAPGSFHYSNVRGESWQHI---------TRQICAQLVAQHHITADEAQRIIAREGEGEN 495 S S + E + + + +L ++ +RI RE + Sbjct: 486 LQGMESLVLSLLDEEKFFILHSDKSYMENVDYMIDKLYDLSYVDEGFKERIHTRESKSTM 545 Query: 496 LIVNRLAIPHCWSEQERR--FRGFFITLAQPVEVNNEVINHVLIA---CAAADARHELKI 550 + +A+PH +++ + F + + E ++++ L+A D +KI Sbjct: 546 VFDEYIALPHAINKETDKIVFSIGVFSDDKKHEKDSKLKVIFLLAIPDIEEKDDDILVKI 605 Query: 551 FSYLASILC-QHPAEIIAGLTGYEAFMELLHK 581 + + +I + E IA + Y + K Sbjct: 606 YDEIIAISKDKQVVENIAKVKNYRELLLYFIK 637 >UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus RepID=Q5KYD3_GEOKA Length = 684 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 105/705 (14%), Positives = 223/705 (31%), Gaps = 149/705 (21%) Query: 1 MLNERQLKIVDLLEQQPR--TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GS 56 MLN R +++V LL + T +LAQ VS RTI DI N L + Sbjct: 1 MLNARCIQLVKLLLRSSLYLTADKLAQSLNVSKRTIYYDIQKTNEWLRHEGLKPIQYARG 60 Query: 57 AGYQLE------------IFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLP 104 G++L+ + + L +L L + Sbjct: 61 LGFRLDDEVKQEITTKWNTLQPARHYTYQSWERKAWIGLWILTRVHPLYLCDFLEKLQVS 120 Query: 105 ETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT 163 + + + LK+ ++ L+ G+F E ++ L+ + Sbjct: 121 RSTLLNDIKELKEDWQSFQLQLSFHRKKGYFSSGEEIQKRKLMIRYIH------------ 168 Query: 164 RDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW-PQYPGDEIKQIVEHSG 222 + A D+QH + + I+ Q + +Y G+ I+ + + Sbjct: 169 -----QILAAMDDQHFAAELS----AECQWPIFDWICQFESTFSIRYTGEVIQTLPIYLA 219 Query: 223 LFLGDNAVRTLTGLIEKQHQQAQVISADNV-QGLLQRVPGIASLNIID------------ 269 LF A + E++ + + + + L++R+ ++ ++I D Sbjct: 220 LFQRRWARGKFVQMDEQEKEVLRSMREYQIADHLVRRIENVSQISIPDDEVCYLTTHLLS 279 Query: 270 ----------------------------------------AQLVENITGHLLRCLAAPVW 289 +L +N+ H+ + Sbjct: 280 FRVADDKQMDQNDDITTLKRIIRHMVDDFQTYACVQFKRREELEKNLLVHMKPAYYRLKY 339 Query: 290 IAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH--- 344 + ++KA + F ++ + L + P+ D + I ++F L+R Sbjct: 340 GFHLQNDLTESVKANYQDLFTLTKKVVHHLESVVGQPVSDDEIAYIAMHFGGWLDREGVS 399 Query: 345 -QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSH 403 ++ +I+ + + Q + + VI S E I ++ + Sbjct: 400 VPVRKKVLIVCESGIGTSRMLQKQLGELLSTVDVIGVVSAREYDYISLAGHVDFVVTTTP 459 Query: 404 YL-LDDAVNNYITVKNIITAAG----IEQIKHFLATAFIR-------------------- 438 D V TV+ I+T + +I+ + T + Sbjct: 460 LQPKDVPVY---TVRPILTTEDKMLLLREIEGWTETTSLDLEVVMDIIKKHATVIDEKTL 516 Query: 439 -QQPERFFSAPG--------------SFHYSNV--RGESWQHITRQICAQLVAQHHITAD 481 Q+ +FS + + + W+ L+ + +IT++ Sbjct: 517 YQELNAYFSHSKRKEIWPKPMLKDLLTKRHIQIIEEAGDWKEAIVLAARPLLEEGYITSE 576 Query: 482 EAQRIIARE-GEGENLIVN-RLAIPHCWSEQ-ERRFRGFFITLAQPVEVNNEVIN--HVL 536 + +I G +++ +A+PH EQ ++ F+ + + ++ + +VL Sbjct: 577 YIEAMIQNVLTLGPYIVITPGVALPHARPEQGAKKLGMSFLRIKKGCLFSDREEDRVYVL 636 Query: 537 IACAAADARHELKIFSYLASILCQHPAEI-IAGLTGYEAFMELLH 580 I AA D LK S L ++L + E + L+ Sbjct: 637 IVLAAIDHETHLKALSQLTTLLSNQEHIQMLFKAESVEEVLALVE 681 >UniRef50_C7TGA7 Transcriptional antiterminator, BglG family n=3 Tax=Lactobacillus rhamnosus RepID=C7TGA7_LACRL Length = 622 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 91/631 (14%), Positives = 204/631 (32%), Gaps = 68/631 (10%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +NE+ +++D+L QQ T +L++ GV+ R+I + LN + + + S + GY Sbjct: 1 MNEKIKQLLDILLQQKDYLTALQLSEMLGVTERSIRNYVRTLNSS-ETQGPLIISSNKGY 59 Query: 60 QLE--IFERRSFFQLLQKHDND--DRLLALLLLN-TFTPRAQLASALNLP----ETWVAE 110 +++ ++ +L + D + R+ +L+ + +F LA LN + V Sbjct: 60 RIQRDLYNESIENRLFAEDDAELLFRIAFILVSHVSFITFDDLAMQLNYSVESIRSKVQV 119 Query: 111 RLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLR------------------- 151 ++ L SR G I E ++ +LL L+ Sbjct: 120 LFSKI-HDMNLNVALESRIFTGIRILGAENQKRLLLEQLIPIGKIVKGDLTDSTFKLLNG 178 Query: 152 -KDPFLIPLAGITRDNL---QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWP 207 D I ++ D + H + + +S +++ D Sbjct: 179 VCDKQTIEKEIVSIDTVFSQHHTTMDFIVYAKIICHMVIAISRYRENHPINSSEVKDSNK 238 Query: 208 QYPGDEIKQIVEHSGLFLGDNAVRTL--------TGLIEKQHQQ--AQVISADNVQGLLQ 257 +P ++ + N + L V+ ++ L+ Sbjct: 239 DHPEFQLASSLLARAPTAISNKAEIMALTNYLIAMPLNTPGSFVPNMNVLQRGQLESSLK 298 Query: 258 RVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 R + + + I H++R L K + A+ ++ Sbjct: 299 RAESYYGIPLYSNESYRNQIINHIMRLLDPIEESIPVFNPYSQKTKREYLFAYSIACFLY 358 Query: 317 TLLREQLDIPLFDSD--LIGLYFACAL-ERHQNERQPIILLSDQNAIATINQLAIERDVL 373 L+ DI +S+ + ++ L E ++ + ++ + A + + I+ Sbjct: 359 DELQNDFDIQAPESEIAYLAIHIQLVLTEETKSTIRTELVFQGKKAEGELFRYKIQTYFP 418 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLA 433 + + + +L I + L+I D + I + + I +I++F+ Sbjct: 419 RIDIGVVTTAMDLADISK--YQLIIRCGFQESDDQVNDKIIEISKALNTNDIARIQNFIE 476 Query: 434 TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA-DEAQRIIAREGE 492 T +H+ N I L + + RE Sbjct: 477 T-----VGTMSLIQKLDYHHMN-----ESSSMDAIAYLLKKSGYFNLFPYFK---KRESM 523 Query: 493 GENLIVNRLAIPHCWSE-QERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIF 551 I + +A+PH + + E + + + + V+I AAD + F Sbjct: 524 SSTDIGHLVAMPHPFLKGSETAAKVIVGINKTAISWGRQKVRLVVIYIPAADLKTNKNFF 583 Query: 552 SYLASILCQHPAEI-IAGLTGYEAFMELLHK 581 + + + F+E+ ++ Sbjct: 584 NDVYEHTNNLAEVHALLETKTKREFIEVWNR 614 >UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus halodurans RepID=Q9K679_BACHD Length = 700 Score = 92.6 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 116/616 (18%), Positives = 192/616 (31%), Gaps = 113/616 (18%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ++ R+ I+ L Q T +LAQ VS RTI RD+ + L SAG Sbjct: 3 ISARERNILHQLLQHKDGLTIPKLAQLLDVSTRTIQRDLKGIEDILAEYGLKLNKSSAGL 62 Query: 60 QLE--IFERRSFFQLLQKHD-----NDDRLLALLLL----NTFTPRAQLASALNLPETWV 108 + E+ LQ + ++R + LL + LA LN+ + Sbjct: 63 VISGGPSEQEKLLGFLQTLELNEFTPEERQMLLLAILLQHREPLKLFTLADELNVTVATI 122 Query: 109 AERLPRLKQRYERTCCLAS--RPGLGHFIDE-----------------TEEKRVILLANL 149 + L R + + L + G G I TE K +L+ Sbjct: 123 SNDLTRAEA-WLNGFRLELVRKRGYGVQIIGRESDIRRAISQLLAEHLTESKMYRMLSEP 181 Query: 150 LRKDPF-------LIPLAG--------------------ITRDN-----LQHLSTACDN- 176 L L+ L D + HL+ A + Sbjct: 182 LDDWEQTDAISERLLHLINLELVRNIQEVLADFRKQMVEPMADRAYIGLIVHLTLAIERI 241 Query: 177 -QHRWPLMQGDYLSSLIL-AIYALRNQLTDEWPQ-----YPGDEIKQIVEHSGLFLGDNA 229 Q + YLS L + + L L Q P E+ + H G A Sbjct: 242 RQGEKIEIDPSYLSKLKMDKEFELAADLARRLEQKLGMNIPEAEVGYMTMH---IRGAKA 298 Query: 230 VRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVW 289 L+E+ + Q V V+ L+ V + D L + + HL L Sbjct: 299 HIETESLLEESNFQLGV----RVKALIHEVEKSLHVQFQDPSLFQGLVAHLKPALYRIRE 354 Query: 290 IAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNER- 348 + + +K + F + + E + IP ++ + ++F ALER + +R Sbjct: 355 KMKIYNPLLEKIKQDYEELFHVVQVKGNKVFEPITIPEEEAGFLVMHFGSALERLKRKRT 414 Query: 349 -QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSEL-VAIREEIEPLLIINNSHYLL 406 + +++ S + IE++ I S EL + + L H + Sbjct: 415 LKVLVVCSSGIGSSKFLASRIEKEFPEIASIEQASFFELGEKNLHDYDLFLSTIPLHADV 474 Query: 407 DDAVN-----------------------NYITVKNIITAAGIEQIKHFL---ATAFIRQQ 440 V + +T + E + L A + Sbjct: 475 KHFVVQPFLPPHEVKQIRAYLDEKLREPSAVTETGQASLQVAEGGSNVLAIERFAHFAKL 534 Query: 441 PERFFSAPGSFHYSNVR-GESWQHITRQICAQLVAQHHITA--DEAQRIIAREGEGENLI 497 + + F V G S + +IC L + +T AQ +I RE G I Sbjct: 535 NQDIYQVLSHFQLIQVERGISIEEGIERICRSLEKKGILTNGGGVAQALIERERAGGVAI 594 Query: 498 VN-RLAIPHCWSEQER 512 N LA+ H S Sbjct: 595 PNTSLALFHTRSRDVT 610 >UniRef50_B6FXG1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FXG1_9CLOT Length = 641 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 93/638 (14%), Positives = 213/638 (33%), Gaps = 74/638 (11%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 LNERQ I+ L ++ T E++++ VS RTI D+D + + L +I + Y Sbjct: 4 LNERQNSILKYLYNKKDYTTINEISKEFKVSVRTIRYDLDNIEYMLKDNDKISLVRTPRY 63 Query: 60 QL--------EIFERRSFFQLLQKHDNDDRLL----ALLLLNTFTPRAQLASALNLPETW 107 + +I S F ++ + +DR++ LL+ N+ +LA+ L++ + Sbjct: 64 GIKLEFKGKRDILTFSSIFDCVEINSPEDRVIFIAINLLIGNS--KVEELANMLSISKNT 121 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK-----DPFLIPLAG 161 V L + K+ + S+ +G I+ EE NL K + L+ + Sbjct: 122 VVSDLKKAKEILNNLRINVISKAYVGTCIEGDEEDVRYAFINLYYKISNADNYKLLKMII 181 Query: 162 ITRDNLQ---HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIV 218 D+++ LI+ I ++ + +E Sbjct: 182 DDFDSVKNDIEERIHKVENKLSLEYSDTSFKELIIIIMYCFMRMGEYSNFNYSEEYIHEK 241 Query: 219 EHSGLFLGDN---AVRT-----------------LTGLIEKQHQQAQVISADNVQGLLQR 258 E F A +T + I + + +++ Sbjct: 242 EQEEEFEAIQYAFADKTEDKKEICYLMKWFKSAKVMSFINDKSDVKMDGNKYLAMRIIED 301 Query: 259 VPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 + ++ D V ++ H + + ++K + ++ + Sbjct: 302 MEKYTGIDYSNDFDFVNSVVMHFSVAMYRMQNNFKIENPLKEDIKMRLGIIYQITEDVMK 361 Query: 318 LLREQLDIPLFDSD--LIGLYFACALERHQNE---RQPIILLSDQNAIATINQLAIERDV 372 ++ + D + + ++F A ER E + +I+ + A A + +E + Sbjct: 362 KYESEIGVEFPDDEVSYMAMHFGAAFERKTQEIFDTKALIVCNSGLATAGLLSARMEVML 421 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 +V L+ L + + +II+ + + Y+ V ++ + ++K Sbjct: 422 PQIQVEGVCRLNNLEEELKNKDVDIIISTVP--IRNTDIEYVEVNPMLNIDDVLKLKKLA 479 Query: 433 ATAFIRQQPERFFSAPGSFHYSNV-------------RGESWQHITRQICAQLVAQHHIT 479 + E S S+V ++W+ + L+ I Sbjct: 480 FNNVYEKSSEYLVSKYKGDKVSSVAEIIKKSNAAFLYDADNWRDTIAEASKPLIKSGAIK 539 Query: 480 ADEAQRIIAR-EGEGE-NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE---VINH 534 + +I E G + + +A H ++ +TL + + I Sbjct: 540 EEYVDDMIKAIEDLGTYMVFIPEIAFVHASNKNVVNNAVSMLTLKNEIYFGDNSEVRIKS 599 Query: 535 VLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGY 572 +++ + ++ +++ + L + AE Y Sbjct: 600 IVVLANKDENKNLIELINILT---KNNNAEKFKNAEKY 634 >UniRef50_B0N368 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N368_9FIRM Length = 619 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 91/607 (14%), Positives = 213/607 (35%), Gaps = 78/607 (12%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ++ +RQL ++ + T +L+Q VS +TI +I LN +N A I + S G Sbjct: 3 VVTKRQLNLLQVFMDSNRYLTGQKLSQLLNVSSKTIRNEIKILNQLMNNFALIQSIPSHG 62 Query: 59 YQLEIFERRSFFQLLQK----------HDNDDR---LLALLLLN-TFTPRAQLASALNLP 104 YQ+ IF+ F + K + +R +L L+L + F ++ L + Sbjct: 63 YQISIFDDDLFNCWIDKVSKQWSYFIPTNPLERAYYILGLMLESQEFIKIDDISDILFID 122 Query: 105 ETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGI 162 T V+ L +++R + + G G I+ E + R+ + + K L G Sbjct: 123 RTSVSRSLKYIRERLNDFDLKIVQKTGKGLKIEGEEFRYRLCMAEYIYHKIGMLSTKIGE 182 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDE-WPQYPGDEIKQIVEHS 221 + + L N M + I+ I N++ + + + +EI+++ Sbjct: 183 DHEFIDELRKVIFNDG--ITMPQRVFQNFIIHIQVQLNRIQRKCYISFHDNEIEKMKMEY 240 Query: 222 GLFLGDNAVRTLTGLI------EKQHQQAQVISAD----------------------NVQ 253 + + + + E+Q A I V+ Sbjct: 241 EFLVAKDVSKVINKYFHIELSVEEQCYLAIHILGKKSNSTSAIESCINDQLKEEIDIIVE 300 Query: 254 GLLQRVPGIASLNIIDAQLVEN-ITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 + +V + +++ + + + H+ + R + +K + A+ +S Sbjct: 301 KMFNQVKKVFNIDFHNDMYLRKALGIHINPMENRLKFNTYSRNPLIYVIKENYTLAYILS 360 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQ---NERQPIILLSDQNAIATINQLA 367 + + D + + I ++F ALER + +++ +++ A++ + + Sbjct: 361 MEAWLAIYNNADYINVEDEIGYIAIHFQYALERRKRNIAKKRVLLINEYNVAMSELLSFS 420 Query: 368 IERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQ 427 I + + ++I +++S + +E I + L + I + IIT E Sbjct: 421 ILKRYKD-SLVIEKTISAGELSKYHLESYDYIITTVPLDESLDIPVIHIHPIITTHDFEV 479 Query: 428 IKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 + + I + F ++ + E+ + I + Sbjct: 480 LNKYFRQ--INEYKLSDFLKKEDTYF--IDCETKDDVISYI-------------FEHESV 522 Query: 488 AREGEGENLIVNRL-----AIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAA 542 + E + + H ++ L++P+ N+++ + + Sbjct: 523 SFETFYHTNPLIGFETSLQTVIHYMPIYNQKSSINAYLLSKPIVWKNKLVKIIFVLKLGI 582 Query: 543 DARHELK 549 D+ L+ Sbjct: 583 DSEQLLQ 589 >UniRef50_B0MH65 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MH65_9FIRM Length = 693 Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 110/632 (17%), Positives = 219/632 (34%), Gaps = 106/632 (16%) Query: 2 LNERQLKIVDLLEQQPRTPG-----ELAQQTGVSGRTILRDIDYLNFTLNG--------K 48 +N+R +I+ L Q+ ELA+Q GVS RTI D++ +N L+ Sbjct: 1 MNKRSREILSTLIQKKEYGQAAQMKELAEQFGVSVRTIRNDLEQINEFLSKNELSGVSLG 60 Query: 49 ARIFASGSAGYQL--EIFERRSFFQLLQKHDNDDRLLALL--LLNTFTPRAQLASALNLP 104 + + + R +F+ + + +A L N + + LA + + Sbjct: 61 KQGVIETGKDINMARQYLFRDNFYSYKLEKNERKIFMATLLICENDYRTLSDLADCMYVS 120 Query: 105 ETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILL-------ANLLRKDPFL 156 + V + L LK+ + + + S G ++ E+ + +LL ++ R+ P Sbjct: 121 RSTVIQDLESLKKFFRKHRLYVVSHSNKGLMLEGEEKNKRLLLFSMVKSSESVYREAPVF 180 Query: 157 IPLAGITRDN----LQHLSTACDNQHRWPLMQGDYLSS---------LILAIYALRNQLT 203 L G ++ ++ L T + G +L+ L+L++Y +R ++ Sbjct: 181 ERLIGSLKEECRVDMEDLKTMEKVINLAEHFSGRFLTDTSFTDLKYFLLLSLYRMRLKIY 240 Query: 204 DEWP-------QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNV---Q 253 E + G +KQ+ + +G+ + ++ V+ L ++ + + S + Q Sbjct: 241 AEQDGKKNSKYEMAGYILKQLSDFAGIEVVEDEVKFLGRILNEMRYIKKTTSNQEIVKMQ 300 Query: 254 GLLQRVPGIASLNII-----DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 + + S++I D EN+ HL + + S + + +P Sbjct: 301 VITRTFIEHVSIDIDLNLQGDYIFYENLINHL-ESMFSSAIRDNTVSSVVTEVLERYPKI 359 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQL 366 + + +L + + L + + I ++ A+ER++N + ++ N +QL Sbjct: 360 QKAVQNNVFVLEDYIGRKLNEVEISYIVVHICAAIERNRNSAERYSVILVCNGGIGTSQL 419 Query: 367 AIER--DVLN-------------------CRVIIARSLSELVAIREEIEPLLI---INNS 402 + R N VI++ + +++PLL N Sbjct: 420 LLARLKKYFNFHVADIIPAHDLKNVAVDEADVILSTVALDTDLEYIQVDPLLNDGDCINV 479 Query: 403 HYLLDDAVNNYITVKNIITAAGIEQIKHFLATAF-------------IRQQPERFFSA-- 447 L N T K E + I + FF Sbjct: 480 GKKLSRLKGNRSTGKKQTKKEKPEAVHMKRIKEILTSDTDPEKMIFKIEEVVNEFFHKEV 539 Query: 448 --------PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EGEGE-NLI 497 P NV ++WQ RQ L+ I +I E G L+ Sbjct: 540 SLPLAEMLPKQAIRLNVSCKTWQEAVRQSAQYLLENDCIEERYISSMIKNVEQNGPYILV 599 Query: 498 VNRLAIPH-CWSEQERRFRGFFITLAQPVEVN 528 A+PH + ++ I L +PV Sbjct: 600 APGFALPHEALNAGAKKVGMSLIRLDEPVVFG 631 >UniRef50_B9Y9G7 Putative uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9G7_9FIRM Length = 343 Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 121/320 (37%), Gaps = 14/320 (4%) Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 V +L + L++ +A L + HL+ L + + + +KA++P A++ Sbjct: 6 VTRILLEIQRQFQLDLTLNANLRIALALHLIPLLTRLKYNMQLTNDMKDEIKASFPFAYE 65 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAI 368 +S+ +++ L D + I ++F+ +E+ +++ + + + N L I Sbjct: 66 LSVITSDMIQNTYHYALSDDEISYIAIHFSNHIEQLYQQKKEKKKILIISCARSSNSLLI 125 Query: 369 ERDVLNCRVIIARSLSELVAIREEI----EPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 + V + + + + + E I++ S I + I Sbjct: 126 YSKIQKKFVQDINAFTIIQMDKLDSITPDEFDAILSTSLKYPKIP-EKAIKISEYIDEQD 184 Query: 425 IEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHIT-ADEA 483 + I L + + + + + + R + +++C +++ ++ Sbjct: 185 CKIISSLLNDDYEKIHVKNYITKELIY---EGRLNDKNQLLKKLCELAAQKYNFDLSELL 241 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVN-NEVINHVLIACAAA 542 ++ RE G N +A+PH + L P++ + + V+ V++ Sbjct: 242 ASVLEREKLGFTSYGNYVAVPHTMTRISDETFITAGLLHTPLKWDEDNVVYLVILISLGK 301 Query: 543 DARHEL-KIFSYLASILCQH 561 H+L ++S L+ ++ Sbjct: 302 KENHDLYSLYSSLSKLISNK 321 >UniRef50_C5RM48 Transcriptional antiterminator, BglG n=1 Tax=Clostridium cellulovorans 743B RepID=C5RM48_CLOCL Length = 686 Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 108/672 (16%), Positives = 231/672 (34%), Gaps = 106/672 (15%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI- 63 +Q + +L + L +Q VS RTILR+I LN L + + L I Sbjct: 8 QQFVLNKVLYEGSININSLERQLNVSSRTILREIASLNAELKKSSIKIFNDE-KMDLNIA 66 Query: 64 ------------FERRSFFQLLQKHDNDDRLLALLLLN-TFTPRAQLASALNLPETWVAE 110 L K + LL++ + + N+ ++ Sbjct: 67 GNKENIQEIKASLNSVPVQWLFTKEQRQIIIACELLVSKEPLKASYFSHKFNVVMGSISL 126 Query: 111 RLPRLKQ-RYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAG-------- 161 L +++ + CL + G I +E + +LL + L Sbjct: 127 DLDSIEKVLITKNLCLIKKRSYGISIGGSEWNKRNAFVDLLFEFKTFDDLLSYFYNRKID 186 Query: 162 ----------ITRDNLQHLSTACDNQHRWPLMQGD--YLSSLILAIYALRNQLTDEWPQY 209 + + + L D YLS I + A++ + Sbjct: 187 SVVKSFFEIIFGSKTINLVKDVLNEDKFQSLKINDVKYLSFFIQVLLAIKKTENSDNILL 246 Query: 210 P---GDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH---------------------QQAQ 245 P ++I+ +V++ + D +++ ++ + ++ Sbjct: 247 PQKVKEDIRVLVDYESIKFLDESLKQRGIVLPEDELGYLYLYLSDYKYLYKKSGNSTESD 306 Query: 246 VISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAA 304 + D V+ L+ V + N+ ID QL++++T H + + +N ++ Sbjct: 307 IDYGDVVRELVTEVSKKINSNLSIDDQLIKDLTQHFKQTFYTLNLGVKVINPLINEIEEH 366 Query: 305 WPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNA 359 + F++ L+ + ++ + + I ++ A++R Q+ + I I+ S A Sbjct: 367 YSQLFEIINEKCKLIFSRYNLKIPREEVGYITMHIEVAIQRQQSILKKIKVLIVCSGGIA 426 Query: 360 IATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNI 419 + I I+ + I SL ++ E + LI+ + ++A N I V Sbjct: 427 TSRIINNKIKSLFPDIEDITIGSLHDINDSNLENKYDLILATVPVMSNEASN-IIEVSPF 485 Query: 420 ITAAGIEQIKHFLATAFIRQQPERFF---------------------SAPGSFHYSNVRG 458 +T IE+I +F+ + + F S +F Sbjct: 486 LTQENIEKISNFIFNLKVNAISKEKFTDTKNETNKNEISNTEYEIANSVIKNFQLEKANV 545 Query: 459 ESWQHITRQICAQLVAQHHITADEAQR--IIAREGEGENLI-VNRLAIPHCWSEQERRFR 515 E++ + + L + I E R I RE +G ++ + +A+ H S++ Sbjct: 546 ETFVDLINHVVDDLADKKFIKDKEVVRELIFKREEKGNVVVPGSNIALIHTRSDEMSTPL 605 Query: 516 GFFITLAQPVEVNN-----EVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLT 570 L + + + + E ++ L+ A + Y+ +L + + +I Sbjct: 606 IGVYRLEKSLSMGSVGFTTEDVDTFLVLLARNSESN------YILQMLGKVSSALIE--- 656 Query: 571 GYEAFMELLHKG 582 Y+ F+E+L G Sbjct: 657 -YDDFVEMLKIG 667 >UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVY0_ALKMQ Length = 705 Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 99/687 (14%), Positives = 226/687 (32%), Gaps = 109/687 (15%) Query: 1 MLNERQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAG 58 M ++ + L ++ T +AQ VS RT+LR+++ + L + + G Sbjct: 6 MTTRKKDILYRLCKENDYVTISNVAQDLNVSSRTVLRELEEIGKWLEKEGVFLDKKTGVG 65 Query: 59 YQL-----------EIFERRSFFQLLQKHDNDDRLLALLL-LNTFTPRAQLASALNLPET 106 L E+ E + ++ + + + LL N L LN+ E Sbjct: 66 IHLPCSLEKKEELLELIEHANSIKIFTPQERQTIIASELLQANEPIKFYYLTKILNVSEG 125 Query: 107 WVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF---------- 155 ++ L +L++ + L +PGLG +I E+ + + NL+ ++ Sbjct: 126 TISHDLDKLEEWVDIYNLQLIRKPGLGVYIAGREKHKRRAIINLIYENVEEKQLLSFIQE 185 Query: 156 -------------------LIPLAGITRDNL-------------------------QHLS 171 L+ L HL+ Sbjct: 186 NITKSPEISGSIEIKTRNRLLNLIDKETIRTLEGLIYIAEEEMGYKLADSAYVGLIVHLA 245 Query: 172 TACD--NQHRWPLMQGDYLSS-LILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDN 228 A + +M ++L+ + + +L + +I + Sbjct: 246 LAIKRIKNNEIIIMDKEFLNELNQNPEFIIARKLALNLSDFFNIDIHEDEIGYITMHLMG 305 Query: 229 AVRTLTGLIEKQHQQAQVISADNVQGLLQRVP-GIASLNIIDAQLVENITGHLLRCLAAP 287 + + + +++ S + +L+ + HL + Sbjct: 306 SKNRGNVTKNETSTIGSFELVKLAREMIKIAEAETGSFIGNNEKLLTGLVNHLEPAIKRI 365 Query: 288 VWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER-- 343 + R + +K +P +S +L + L + +S+ I ++ +E+ Sbjct: 366 KMKMDIRNPLLQEIKTRYPHLIKVSSKCAKVLEDYLGQKMPESEIAYIAMHLGAVIEKKE 425 Query: 344 --HQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARS---LSELVAIREEIEPLLI 398 Q + + + + IE++ N V+ S L E +EEI+ ++ Sbjct: 426 IMPQIRFRVAVACPSGIGTSKLLATRIEKEYDNMHVVGIISSFRLEESWLKQEEIDFIIS 485 Query: 399 INNSH-----------YLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSA 447 LLD+ + I+ I+ + A ++ + + + Sbjct: 486 TIPIEKSSIPVIKVNPLLLDEDKYHIHQSMKKISKTSIKPKEKRKANVSLKDKLIQMHNY 545 Query: 448 PG-------SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI-VN 499 G + E + + + A LV + Q +++RE +G LI Sbjct: 546 SGAIIEVLDNLFLETYYVEDIEELIHIVSAMLVKEKVGQDKLTQDLLSREKKGGTLISGK 605 Query: 500 RLAIPHCWSEQERRFRGFFITLAQPV-----EVNNEVINHVLIACAAADARHE-LKIFSY 553 ++ HC + + + L +P+ E I+ V++ A +++ L++ S Sbjct: 606 GFSLLHCRTSSVEKLYFGAVRLIKPIYYLNSRGEEEAIDLVIVMIAPENSKQAYLEVISE 665 Query: 554 LASILCQHPA--EIIAGLTGYEAFMEL 578 ++ ++ P ++ G EA++E+ Sbjct: 666 VSKMIIDKPNFLVLLRGNAKEEAYLEI 692 >UniRef50_Q88S25 Sorbitol operon transcription regulator n=1 Tax=Lactobacillus plantarum RepID=Q88S25_LACPL Length = 618 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 94/619 (15%), Positives = 210/619 (33%), Gaps = 56/619 (9%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 +N + L++++ T +L VS RT+ + I LN L G A+I Y Sbjct: 1 MNNQYLRLLNFFVVNDSVTMDDLVAFAHVSERTMCKYIQRLNDDLAGVAQIQ-EQRHRYY 59 Query: 61 LEIFERRSFFQL--------LQKHDNDDR----LLALLLLNTFTPRAQLASALNLPETWV 108 L++ + ++ L + D R L LL + + LA L + +T + Sbjct: 60 LQVTDYSRLTKIQMGHLKKELDFNSTDKRDAYILKTLLECHDYVTLDSLAEQLMISKTTL 119 Query: 109 AERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVI-LLANLLRKDPFLIPLAGITRDN 166 L RL+++ + S G + + V ++ + + L L ++ Sbjct: 120 NRDLKRLREQLVTYHAEIKSMTNNGIKLVASRTYEVFAVIDHFIYDYFELSKLLSKKQEE 179 Query: 167 LQHLST----ACDNQHRWPLMQGDYLS-------SLILAIYALRNQLTDEWPQ--YPGDE 213 L+ + R L L + I N L D+ P Sbjct: 180 QLKLTLLNNGVDNETSRLILKNISVLKFAFPIGYRIEQPITNFSNYLIDDQPMDDIRSSV 239 Query: 214 IK----QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNI-I 268 + +I +F+ +T L+ ++ + Q+ DN + L + +S I Sbjct: 240 VACFSTEISMDELVFVLAPLAFKMTSLLSRKRMKEQI---DNNRMLFLSMGNHSSHQIPF 296 Query: 269 DAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPL 327 D + L E I HL + + Q N +P A+D++ + L LD + Sbjct: 297 DFEHLYEQIKYHLFFLINRTILHVPTAQLLPENQLTKYPLAYDLAHTILGFLETHLDFKI 356 Query: 328 FDSD--LIGLYFACALERHQN-ERQPIILLSDQNAIATINQLAIER--DVLNCRVIIARS 382 ++ + LY LE N + +++ + + ++ + +A Sbjct: 357 TTAEFGYLVLYVEMELEDQDNIVNHKFEIAIVGQVGSSVIKFIRRQLVEMFQDDITVAVF 416 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE 442 +E ++ LLI + D + + ++ + + + + Sbjct: 417 DNEWQLNQDNGRYLLIFS------DQPIVYHDETTPVVRISAAFRTNELRGKLQVSLVEK 470 Query: 443 RFFSAPGSFHYSNVRGESWQ-HITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRL 501 +A F ++ + ++ H+ + R + RE G ++ + Sbjct: 471 AISNATCQFDLWKFNHDTDYLTAVETMIDARISDGHVDSRFKSRWLEREQRGISVFEKGI 530 Query: 502 AIPHCWSEQER-RFRGFFITLAQPVEVNNEVINHVLIA-CAAADARHELKIFSYLASILC 559 AIPH +E++ QP++ + + + + + ++ + + ++ Sbjct: 531 AIPHVVNEKDTPEILLQVGVYDQPIKYLDRTVQMIFLIGTPNNLDQELGQVLTQIYDLVF 590 Query: 560 QHPAEIIAGLTGYEAFMEL 578 + Y+ ++ Sbjct: 591 LASN----NVNIYDRLIDY 605 >UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=Staphylococcus aureus RepID=A5IPR4_STAA9 Length = 651 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 98/633 (15%), Positives = 211/633 (33%), Gaps = 82/633 (12%) Query: 1 MLNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNG-KARIFASGSA 57 ML+ RQ++I+ LL EQ +A Q GVS RTI DI Y+ ++ + +A Sbjct: 1 MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAA 60 Query: 58 GYQLEIFERRSFFQLLQKHDN------DDRL----LALLLLNTFTPRAQLASALNLPETW 107 G ++ +L N D+RL L L QLA +N+ Sbjct: 61 GIKVTTAHATLLNELEHNLTNQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRT 120 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKD---------PFLI 157 +A+ + ++ + ++ L G + E+ A+ + + + Sbjct: 121 IADDIKMIQAQLDQYHLKLNYVHNKGFNVIGEEDHYRKAYAHFIHQYMKQAAPFIEADIF 180 Query: 158 PLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAI---------------------- 195 I + T + D L IL Sbjct: 181 NSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH 240 Query: 196 ---YALRNQLTDE-----WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI 247 YA+ +++ + +P EI I H L T + + + H +Q Sbjct: 241 TNQYAIASKMIENLERSCNVTFPESEIIFITLH--LLGSKMTEHTASSITFEYHDLSQ-- 296 Query: 248 SADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 N+ L+ V +++ D +L ++ H+ + + + +P Sbjct: 297 ---NIHELITCVSQELGIDMSKDNKLHTSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYP 353 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP----IILLSDQNAI 360 + I+ + + I + + I ++FA ++ER +Q ++L Sbjct: 354 QIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSMIKVVLLCGSGIGT 413 Query: 361 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 + + + + + A S+ +L R ++ + S + + I V I Sbjct: 414 SQLLKSKLNHLYPEFHIWDAYSIYQLEESRL-LQDNIDYVISTVPCEISAVPVIHVDPFI 472 Query: 421 TAAGIEQIKHFLATAFIRQQPERFFS-------APGSFHYSNVRGESWQHITRQICAQLV 473 +++ + + ++ + P N + S + L+ Sbjct: 473 NQQSRQKLNQIINDSREQRVMKMATDGKSLADLLPEHRIIINEQPLSIESAIAVAVQPLI 532 Query: 474 AQHHITADEAQRIIAR-EGEGENLIVN-RLAIPHCWSEQERRFRGFFIT-LAQPVEVN-- 528 + ++ I+ + E G ++++ +A+ H ++ + GF +T + + Sbjct: 533 NDGIVYSNYTAAILKQFEQFGSYMVISPHIALIHAGTDYVQNGVGFALTYFTEGIIFGSK 592 Query: 529 -NEVINHVLIACAAADARHELKIFSYLASILCQ 560 N+ ++ V+ H LK L+ L Sbjct: 593 ANDPVHLVITLATDHPNAH-LKALGQLSECLSN 624 >UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZM9_9CLOT Length = 697 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 97/668 (14%), Positives = 210/668 (31%), Gaps = 123/668 (18%) Query: 6 QLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIF- 64 Q+ + L++ P + LA GVS RT+ R+++Y+ +L F AG + I Sbjct: 11 QITLNLLMQDSPVSVKYLADSVGVSKRTVQRELEYIESSLKKYNLSF-QSKAGTGVWIEG 69 Query: 65 ---ERRSFFQLL------QKHDNDDRLLALLLL----NTFTPRAQLASALNLPETWVAER 111 ++ LL + D+R+ L+L + A+ L + E V+ Sbjct: 70 DKSDKEKLTALLMADDTLDVSNKDERIKKLILELLKESEPQKLFYYANMLGVSEATVSND 129 Query: 112 LPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK----------------DP 154 L + + +++ L + G G +++ E+ L + + + Sbjct: 130 LDEVAKWFDKFKLSLVRKQGFGIYLEGKEKAYRKALTAFIDEYTSSYKLTQNDKNTMRES 189 Query: 155 FLIPLAGITRDN-------------------------------------LQHLSTACDN- 176 LI L + H++ A + Sbjct: 190 NLIKLIENKSSKNIYSLLDTDIMKRVISCLINLNNEQIANLTDSSYAGLVIHITIAINRI 249 Query: 177 QHRWPLMQGDYLSSLILA------IYALRNQLTDEW-PQYPGDEIKQIVEHSGLFLGDNA 229 H + L I + + L E+ + P E+ I H A Sbjct: 250 MHNEIIEPDSRLDEDIEHDRDYSLAVIIASSLEKEFDIEIPEIEVTYICLH------IRA 303 Query: 230 VRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVW 289 + K ++ + + + + P I+ + D ++ + H+ L Sbjct: 304 SKMQNTSNSKSSKRNNTLVSLVYEMIEAYDPDISYILEQDDAFIDGLIAHMQPTLVRLTN 363 Query: 290 IAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACA---LERH 344 R ++ +K+ +P F +L E+L++ + +S+ + ++F A LE++ Sbjct: 364 GLAIRNPLLDQIKSDYPDIFKKCKKVTAMLEEKLNLKVPESETGFLAVHFGAAVVRLEQN 423 Query: 345 QNERQPI---ILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINN 401 ++ + ++ + I+ + +E+ N I +L + + N Sbjct: 424 NLSKRTVYVGVVCASGIGISRFIKTKLEKVFGNRISIETYGKGDLDSNTIRKTDFFVSNI 483 Query: 402 SHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESW 461 + + D A + I + +IT + I+ I + I F+ + Sbjct: 484 NMEVPDGA--DIIFINPLITDSDIKNIDANIRKYEITADKSEDRL---DFYNQLDLIHNL 538 Query: 462 QHITRQICAQL-----------------VAQHHITADEAQR-----IIAREGEGENLIVN 499 + I + I +D+ IIARE + Sbjct: 539 TEQMKMILDNFNIITISKDIDFEKYLDVLKDKLIDSDDNSEIILSDIIAREKIATQVFPE 598 Query: 500 -RLAIPHCWSEQERRFRGFFITLAQPVEVN----NEVINHVLIACAAADARHELKIFSYL 554 A+ H + + R N ++ K+ +L Sbjct: 599 MGFALFHTKTSGTKHIRMSACISDSETFENEYFKGISCIITMLLPDDEHLNMNRKLLGFL 658 Query: 555 ASILCQHP 562 + +L + P Sbjct: 659 SEMLIEDP 666 >UniRef50_Q5WJQ9 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WJQ9_BACSK Length = 619 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 81/631 (12%), Positives = 204/631 (32%), Gaps = 70/631 (11%) Query: 2 LNERQLKIVDLLEQQPR---TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 +++++ +++D L Q R + LA+ V+ RTI I +N + S G Sbjct: 1 MHKKRNQLIDFLLNQNREYVSASALAEILNVTDRTIRNYIKDINESF--SDIAIISSPQG 58 Query: 59 YQLEIFER-------RSFFQLLQKHDNDDRLLALLLLNT-FTPRAQLASALNLPETWVAE 110 Y+L + S + +++ + ++ L+ +T ++A + Sbjct: 59 YKLLKDDSQIDQERVGSTNKEMEEVLLEFEIIQFLMNEDRYTTYDEIADQFYYSPQTIRS 118 Query: 111 RLPRLKQRYERT---CCLASRPGLGHFIDETEEKRVILLANLLRKDP------------- 154 R+ RL + + ++ G + TE ++ ILL + Sbjct: 119 RMQRLTMNIDALGIDVSIDTKVFKGMKLIGTEMQKRILLESFFTSISVKKEMFKDFVING 178 Query: 155 --------------FLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRN 200 ++ S + ++ + +AI Sbjct: 179 FRSWVKPETIESVFKVVDEINKNHQLNMEFSIYKKLTTQLIIIIHQINAGHFVAIQDTEL 238 Query: 201 QLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLI--------EKQHQQAQVISADNV 252 ++ ++ E + H + + D+ L + + + + + Sbjct: 239 VNLTDFKEFEVAEAFRSQLHECVHITDDEAIFLVNYLISLQLDLDDAKIKNKNPEVIGKI 298 Query: 253 QGLLQRVPGIASLNIIDAQLV-ENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDM 311 + +L++V + + NI+ H+ R + + KA + +F + Sbjct: 299 EEILRQVEQVYQVPTYSQTRFRNNISNHIYRIINPASHNLLIYNPFVKETKAEYFFSFSI 358 Query: 312 SLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIE 369 + + + ++ + + DS+ + + L+ +R+ + + + +L Sbjct: 359 ASNIALQIEKEFAVEIQDSEIAYLAYHIQVILDSQDKKRKKLKTIILYSRSYERTKLIAS 418 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 + + + + L I + N+I ++N + I++I+ Sbjct: 419 KIATYFDELDICKIEKCSTDYVFDHSYLYIGINLAFTPQTTANFIMIQNGFQSIDIKKIR 478 Query: 430 HFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 FL E S + S + R + +H+ + + R Sbjct: 479 FFL---------EAQNSIIEDAAIHWMNENSPEEAIRHLLTLNGQEHY-----YEPTMKR 524 Query: 490 EGEGENLIVNRLAIPHCWSEQER-RFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 E I N +AIPH + E E + R + ++ NE++ ++I ++D Sbjct: 525 ESMSYTSIGNLVAIPHPYFEMEEYKERVIIGVNQKAIQWGNELVQLIIIYIPSSDIERNE 584 Query: 549 KIFSYLASILCQ-HPAEIIAGLTGYEAFMEL 578 F+ + + F+++ Sbjct: 585 YAFTEFFQKTKRIEHVRELLHTEQKTEFIKV 615 >UniRef50_UPI0001C369FF probable licABCH operon regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C369FF Length = 648 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 83/620 (13%), Positives = 185/620 (29%), Gaps = 74/620 (11%) Query: 19 TPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAGYQLEIFERRSFFQLLQK-- 75 T LA+ GVS RT+ D+ L L I + S GY+L + + L + Sbjct: 23 TSAALAEAAGVSVRTVKYDLKELQSFLKEYGVEIESKRSYGYRLLVGDGSDMEGLSKALR 82 Query: 76 ---HDNDDRLLA------------LLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE 120 + + LL+ + +L + + + + L R + Sbjct: 83 ANLRKHKGEVFRYNFQRVIYIINKLLIGKPYYKAEELMDTFYISRSTLTQDLNRARTLLA 142 Query: 121 RT---CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA-----------GITRDN 166 + + R G+G DE + KR+ + R D L + RD Sbjct: 143 KFRLEIDVNLRRGIGVTGDELD-KRLCIAEYFFRYDDKLQVMVQRRADGGKYDWDAQRDT 201 Query: 167 LQHLSTACDNQHRWPLMQGDYLS-SLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFL 225 L + ++ L + + + + LR + + PG + Sbjct: 202 LVRIVWEACRANKIRLSPFLAVDLASHMYVSVLRMKAGCGIGELPGHTMTVEYVRERYAA 261 Query: 226 GD-----NAVRTLTGLIEKQHQQAQVISADN------------------VQGLLQRVPGI 262 G+ + +++ +++ A I + V +++ V Sbjct: 262 GEVADQLEKLYSVSISEKEREYFALHILSKKMPDSGPVGSGEHATLKQCVTEIMREVKDN 321 Query: 263 ASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLRE 321 L+ D ++ + + + R + + A ++ ++ + Sbjct: 322 FELDFTNDPVFLDFLYSSIEPMVLRLRTHLIVRNPLLFENLRRYLFATKVAHSASGIIEK 381 Query: 322 QLDIPLFDSDLIGL--YFACALERHQNERQ-PIILLSD-QNAIATINQLAIERDVLNCRV 377 + + +++ L F + H+ ++ I D + A I + + Sbjct: 382 LFGVQMDNNEFAYLVPAFNMIISTHEKRKKFKIGFCGDLGLSEALIYYNELSESLPRDGY 441 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFI 437 + LI + + L + I T+ I + + Sbjct: 442 ELVWLDRYHNTGYLNQLQYLIYVSDYRLPSELPYYEIQ-DGDSTSEVCSAIAEYK----L 496 Query: 438 RQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI 497 Q + P + + G+S + + + L A+ I A + + N + Sbjct: 497 EQVQIEQYLKPEFGIFG-LEGKSREEVMENLYRCLAARGLI----ATELDWKNAFRANEV 551 Query: 498 VNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASI 557 N +A + + L P+ ++I +++ D L + + S Sbjct: 552 GNGIAHIQDLGRILKNAGCYVCILKTPILWEQDIIKVLVMIKTKRDGDKNLSLLCRIVSN 611 Query: 558 LCQHP--AEIIAGLTGYEAF 575 P E Y+ F Sbjct: 612 WASSPEKVEHFLKSQSYDVF 631 >UniRef50_B9Y7U3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7U3_9FIRM Length = 639 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 98/646 (15%), Positives = 215/646 (33%), Gaps = 76/646 (11%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 + +RQ +++ + + P + ++ +S RT+ DI+ +N++L A AG Sbjct: 1 MKKRQSELIRWILRSPGLPFETVLEKLKISKRTLYYDIEEINYSLRHCA--QLKKVAGQL 58 Query: 61 LEIFERRSFFQLLQKHDNDDR--------LLALLLLNTFTPRAQLASALNLPETWVAERL 112 + + + + Q+L + + +L +L + F + Q+ L + + + + Sbjct: 59 VMVGDLQRVSQMLANQELTQQGTEEKLEFILYKILCDDFPRQEQMEQKLQISHSTMTYLM 118 Query: 113 PRLKQRY-ERTCCLASRPG-LGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHL 170 L+ + + L G DE + + L L D LI + L Sbjct: 119 NELRDQLDAQGIELRYDEGTYQIRGDENQIRDRFL--YCLYNDNNLINRISD-----EIL 171 Query: 171 STACDNQHRWPLMQGDYLSSLILAIY---ALRNQLTDEWPQYPGDEIKQIVEHSGLFLGD 227 S N+ LS+++ I A + ++ +W Q + L + D Sbjct: 172 SFNQKNELGLADYSMALLSAMLRFIRLRMARQCRIRSDWTQETQAFRYRQSVAEDLNIAD 231 Query: 228 NAVRT-----LTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVE-NITGHLL 281 ++ L + Q I V L+ ++ I D +++ +I HLL Sbjct: 232 PLEAAYLTAFISSLTTLDAGEKQTIVDQGVTRLITCFESRMAVVIEDREMIRRSIAQHLL 291 Query: 282 RCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR---EQLDIPLFDSDLIGLYFA 338 + R ++ +K+ + F M + + E I + + YF Sbjct: 292 ASYYRIQFQFPIRNFCLDEIKSRYFELFTMIRLILEDEQIFPEFKGIREEEIAFLTAYFG 351 Query: 339 CALERHQNERQP----IILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIE 394 L ++ R+ +++ ++ + Q+ IE+ V +++ SL L I + Sbjct: 352 GVLRSQESHRRMRSRILLVCPQGLMVSKMLQIQIEQSVPLIQIVDQVSLQRLPQITAAYD 411 Query: 395 PLLIINNSHYLLDDAVNNYITVKNI---------------ITAAGIEQIKHFLATAFIRQ 439 ++ D + + + ++ + + Q Sbjct: 412 YIVSTMPIAGYDDKLIQVNPLLNRQDVCLLMEKCTGISMPDSVPEVQPLLQIIEKYCEIQ 471 Query: 440 QPERFFSAPGSFHYSNVR---------------------GESWQHITRQICAQLVAQHHI 478 + Y + +SWQ + LV I Sbjct: 472 NRPALVRELEALLYKHKEERGSPMLKELITSDKIRVLNHVDSWQSAIAEAAQPLVLDGSI 531 Query: 479 TADEAQRIIAR-EGEGENLIV-NRLAIPHCWSEQ-ERRFRGFFITLAQPVEVNNEVINHV 535 + Q +IA E G +++ +R A+PH R + + + V++ + +N Sbjct: 532 DPEYIQEMIASIEKYGPYIVLADRFALPHASGALHVHRLGMAILAVKEAVDLLGKPVNL- 590 Query: 536 LIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHK 581 A D+ ++ + L IL E + L+ + Sbjct: 591 FAVLATVDSTSHIRALAELTEILYDQANIDKLCQGSAEEILRLIRQ 636 >UniRef50_Q899A8 Transcriptional regulatory protein n=3 Tax=Clostridium RepID=Q899A8_CLOTE Length = 650 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 85/635 (13%), Positives = 221/635 (34%), Gaps = 101/635 (15%) Query: 9 IVDLLEQQ-PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG--YQL--EI 63 I+ LL+ RT E++ GVS T + +D + L K Y + E+ Sbjct: 44 ILYLLKSHYSRTLQEISNFLGVSRSTTSKYLDEIEGYLREKGVQLVRRRNKGIYIVGREL 103 Query: 64 FERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTC 123 +RR + ++ + R+ LL + + L + + + + + T Sbjct: 104 QKRRIIYDIILHSYDYSRIHGLL-------QPETIYDLMIWNYFYGIDIKHIWELLIDTL 156 Query: 124 CLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLM 183 I ++ ++ N I + I +D + + Sbjct: 157 K-------AINISVSDMAFYNIIIN------TCIMIKRIQQDFIADIEY----------E 193 Query: 184 QGDYLSSLIL--AIYALRNQLTDE-WPQYPGDEIKQIVEHSGLFLGDNAVRTL----TGL 236 + DY+S N+L+ P EI I H FLG N ++ L Sbjct: 194 KMDYISETFEYDEAKNYCNELSKRYNIIIPKTEIIWISMH---FLGANPIKFLEDDIFSN 250 Query: 237 IEKQHQQAQVISADNVQGLLQRVPGIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQ 295 I+++H+ +++ ++ + + + + +++ + HL+ + + + + Sbjct: 251 IKERHKLVN-----SIEKMVSQFEKEVDIALENKDEIINGLFVHLMPAINRAKYSIKIKN 305 Query: 296 SSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ----NERQ 349 S ++K ++ + ++ + + ++ + ++ L + + L+F A+E+ +++ Sbjct: 306 SYKEDIKNSYNEFYTITANLVRIINNEFNVELGSDEISYVCLHFVAAIEKMNKSYATKKR 365 Query: 350 PIILLSDQNAIATINQLAIERDVLNCRVI--------IARSLSEL------VAIREEIEP 395 I++ S + + + + +I I+R+ ++ VA++E P Sbjct: 366 IIVVCSTGVGTSKLLANKLRNSYDDIEIIDILSYNQFISRNTFDIDYVISTVALKEANVP 425 Query: 396 LLIINNSHYLLDDAVNNYITVKNIITA-----------------AGIEQIKHFLATAFIR 438 ++++N D + I + + +K L I Sbjct: 426 VIVVNPLINDEDKKQLSKIFSPKVKEKIINVESIINVVQKHCVIKDLTALKKDLKKNIIG 485 Query: 439 QQPERFF----SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII----ARE 490 + + +NV + + L ++ + + ++ R Sbjct: 486 EIQDEMLHIRDLLVCEAIITNVEVTDAKEAIKISGNALKQLGYVNDNYVKSLVNCLNKRG 545 Query: 491 GEGENLIVNR-LAIPHCWSEQ-ERRFRGFFITLAQPVEVN---NEVINHVLIACAAADAR 545 G ++++ +A+PH E + + L +PV+ N ++ + ++ + Sbjct: 546 KNGPYIVISHGIALPHAKPEDGVYKTGFSMVILKEPVKFNHKKHDPVQVIISFATKNNQE 605 Query: 546 HELKIFSYLASILCQHPAEIIAGLTGYEAFMELLH 580 H + + I+ + + + + + LL Sbjct: 606 HVKALEEITSFIMLRKNFKNLIQCKDSKEVILLLE 640 >UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9A5_9FIRM Length = 705 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 95/621 (15%), Positives = 198/621 (31%), Gaps = 83/621 (13%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIF 64 + ++ + L Q T LA+ GVS RT+LR++ + + F L Sbjct: 52 KLIEQLLSLPQGWVTAAALAESIGVSRRTVLRELPAVEQWMQAAGAHFVRNPGKGLLLDE 111 Query: 65 ERRSFFQLLQKHDNDDR------------LLALLLLNTFTPRAQLASALNLPETWVAERL 112 L + ++ DR L LL A LA AL + E+ ++ L Sbjct: 112 APERRDALRTQLNSGDRKELSRAERRQQLLTRLLSEQEPCKTAVLARALGVSESTLSADL 171 Query: 113 PRLK-QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQH-- 169 L+ + + + RPG+G ++ +++ LLR LA + + Sbjct: 172 DELETKLHPYRVEMFRRPGVGVWLQGDASSYRRVVSALLRSSMPEKELAEVLCGRMPENE 231 Query: 170 -----LSTACDNQHRWPLMQGDYLSSLILA---IYALRNQLTDEWPQYPGDEIKQIVEHS 221 L T + L Q + L L AL T Q K Sbjct: 232 IFSTLLDTKTAEKVWAALQQFEQEEQLHLPDAGFLALAIHCTLTIQQLRQGGDKGSAPRG 291 Query: 222 GLFLGDNAVRTLTGLI---------EKQHQQ----------------AQVISADNVQG-L 255 G++A R + L E+ AQ + N++ L Sbjct: 292 LRPAGNHAARLVAALNRAFGLTLPPEEAQYLELYLAAYLGAEDPWGSAQEMELRNLEAAL 351 Query: 256 LQRVPGIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 ++ + ++ L +++ HL L ++ ++ A+P + + Sbjct: 352 IREMEKALHTDLSGYTSLRDDLYCHLRPMLLRVEQNIRTENPQLDTIRTAYPGLWKATRA 411 Query: 315 FITLLREQLDIP-LFDSD--LIGLYFACALERH---QNERQPIILLSDQNAIATINQLAI 368 +++Q +P + D + + ++F LE++ + + ++ + + Sbjct: 412 ACDAVQQQFVLPAISDDEAAYLAMHFGAVLEQNAMFRLRLRVVVACPLGMGSSRFLASRL 471 Query: 369 ERDVLNCRVIIARSLSELVAIR---EEIEPLL-----------------IINNSHYLLDD 408 + + +V S+ EL +I+ ++ ++ +L D Sbjct: 472 GNEFPSLQVEGCCSVRELNTADLRRRKIDFIISTVPLELDYPAVCISPSLLEPDRAVLKD 531 Query: 409 AVNNYITVKNIITAAGIEQIKHF----LATAFIRQQPERFFSAPGSFHYSNVRGE-SWQH 463 A+ Y + ++ ++ + + V+ S Sbjct: 532 AITRYSQNRAE-PEPAVQPVQDTACAGSKLQYYARLTRSMTGLLEHLTIQPVKVPGSRAA 590 Query: 464 ITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLA-IPHCWSEQERRFRGFFITLA 522 + Q Q++ RE G+ I + A + HC + + R ++ Sbjct: 591 LIHAAAQLFCPQEADARLVEQQLRRRETLGDTYIKSLYALLLHCRTSAVKDCRLGYLQAQ 650 Query: 523 QPVEVNNEVINHVLIACAAAD 543 PV ++ L+ A D Sbjct: 651 PPVYEPGRIVLGALVLLAPDD 671 >UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDU8_BACSK Length = 688 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 110/641 (17%), Positives = 197/641 (30%), Gaps = 87/641 (13%) Query: 4 ERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYL-------NFTLNGKARIFASGS 56 ER L L +Q T ELA VS RTI RD+ L +L+ + G+ Sbjct: 7 ERVLLQALLANEQGLTLQELADVASVSVRTIQRDLPSLAKVAANHQLSLHRGHFLVLEGA 66 Query: 57 AGYQLEI---FERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLP 113 + Y+L + + + L LL N LA LN+ V L Sbjct: 67 STYKLALKEKLQTINAGDFTSDERVGLLLALLLDANEPVKLFALAKELNVTPATVGSDLT 126 Query: 114 RLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPF---------LIPLAGIT 163 + + E+ L + G G + TE ++ +L ++ + Sbjct: 127 KAAEWLEQFGIKLIRKRGYGIAVKGTETNIRQAMSAILSENLTEEAFYEAVYAGQMQNEV 186 Query: 164 RDNLQH------LSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQI 217 L H + R D ++ + L E G++I+ Sbjct: 187 ASRLLHFVDLETIRLVQSTIQRVKEKHFDDMADQSFIALVVHATLAIE-RIKQGEQIRMD 245 Query: 218 VEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD--------------------------- 250 ++++ L E Q Q+ + Sbjct: 246 AGQLEALHKEDSLPVAQELAEALAQTFQITIPEAEIGYLVMHLRGARIGHIQGEPFEQSN 305 Query: 251 -----NVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAW 305 ++ + + S+++ + L + + HL L + + +KA + Sbjct: 306 AELAGRLKQFIAGMEQDLSVSLAEPSLFQGLLAHLKPALYRVRQGMKIHNPLLEKVKADY 365 Query: 306 PAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQ--NERQPIILLSDQNAIATI 363 A F ++ + L +P + + L+F ALER + +++ S A + Sbjct: 366 AALFAVTAKQASKAFAPLKLPEAEIGFLTLHFGAALERRKRSVSLSALVVCSSGIGSAKM 425 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLI------INNSH-------YLLDDAV 410 I ++ I SL +L L I NN D+A Sbjct: 426 LASRIRQEFPEISSITNASLFDLDKYDPANFDLFISTVKVETNNRQALRVSPMLTADEAS 485 Query: 411 NNYITVKNIITAAGIEQ---IKHFLATAFIRQQPERFFSAPGSF--HYSNVRGESWQHIT 465 + ++ I I+ + +R S SF V + Sbjct: 486 LIKANIDELLNEQTITAAPTIRTNVEEKRSFADIKRMASFIDSFLQSVRLVAVDELLAGI 545 Query: 466 RQICAQLVAQHHITADEAQ--RIIAREGEGENLI-VNRLAIPHCWSEQERRFRGFFITLA 522 R C L + ++ + ++ARE G I LA+ H + +R F+ L Sbjct: 546 RVYCDILEEEGALSEAKQVYDALLARERLGGIGIPGTGLALFHTRLNEIKRPVFVFLDLK 605 Query: 523 QPVEV-----NNEVINHVLIACAAADARHELKIFSYLASIL 558 +V NE I ++ A + F SIL Sbjct: 606 TEAQVASMADGNERIKRAILMLAPEALAEQELAFMSFVSIL 646 >UniRef50_B3WB86 Sorbitol operon transcription activator n=8 Tax=Lactobacillus RepID=B3WB86_LACCB Length = 622 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 90/560 (16%), Positives = 188/560 (33%), Gaps = 51/560 (9%) Query: 21 GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFF-----QLLQK 75 ELA+ VS RT+ + I L +L A I GY L I + R F Q Sbjct: 21 DELAESENVSTRTMQKYIHELGESLGDAAEIRI-NKNGYFLHILDYRQFSLIQSGVFKQN 79 Query: 76 HDNDDR-------LLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQ-------RYER 121 DN+D+ L L+ F P ++A L + + + L + + E Sbjct: 80 IDNNDKQKRQAEILFRLIKERQFIPMDEIADQLTVSRGTLLKDLEACRAWLKNYDLQIEG 139 Query: 122 TCCLASRPGLGHFIDETEE---KRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDN-- 176 + +G +D T + + + D L+ ++R N + T+ Sbjct: 140 ATSRGVKLQVGSTVDLTMLIYNHLFDYVQSRIFTDKTLVASV-VSRLNSAKIKTSTTQIF 198 Query: 177 ----QHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPG-----DEIKQIVEHSGLFLGD 227 Q L + Y+ S I Y L D+ P + ++ + + Sbjct: 199 EKIMQIIVFLKKHHYVFSGISPYYT---NLMDDSPLFINIVGDIEDRCHVSFSQEEYDFL 255 Query: 228 NAVRTLTG---LIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCL 284 L L + + + + V + I Q E HL+ + Sbjct: 256 AFPFNLYANKLLSPAKLKVKVHENKAMFDQIASEVRALVDAKIDYDQFYETTKYHLIFLI 315 Query: 285 AAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALE 342 ++ + + + A DM++ I L E++ I + D + + +YF AL+ Sbjct: 316 NRGIFHISPSDYLTDKMLQRFQLAADMAILMIDKLEEKMGIHIADVEINYLTVYFEMALQ 375 Query: 343 RH--QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIIN 400 QP + + + L + + + + + + I + + L+++ Sbjct: 376 HADVNVPDQPRVGFYSNMGQSVLQYLQNQLNTMFESQVTITAYQDEEDILKHQDELIMVF 435 Query: 401 NSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGES 460 L + + +I +E + + ++ + + + N S Sbjct: 436 TDRPLAHKLRIPVVMIGDIFRDRVLE---TKVRVSAVQHEIDAGRIIWRPQVFENRASMS 492 Query: 461 WQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGF--F 518 ++ + R + R+I E + ++ N +AIPH ++ R F Sbjct: 493 YEAVLRAALKPDSDAGLVDPGFIDRLIKHESTTKFVLDNGVAIPHAIAD-IDENRLFLHL 551 Query: 519 ITLAQPVEVNNEVINHVLIA 538 L + V + ++++ + Sbjct: 552 SVLKHAIPVGGKAVSYIFVI 571 >UniRef50_C9KLZ6 Putative PTS system, IIA component n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLZ6_9FIRM Length = 711 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 110/672 (16%), Positives = 222/672 (33%), Gaps = 115/672 (17%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +N+R L I+D L + P T +LA + VS R++ + + + + Sbjct: 13 MNKRVLAILDELITPKGPLTLADLASRNHVSERSVRNYLAEIEALSQCEGVGKVNLLNRT 72 Query: 60 QLEIFERRSFFQLLQKHDNDD------------RLLALLLLNT--FTPRAQLASALNLPE 105 L+K DD + A LL+N+ + Q+A L + Sbjct: 73 GQVTVPDGFPLAELRKKATDDYYHYHLSAKERRAIAASLLVNSTGYVTLQQIADYLYVSR 132 Query: 106 TWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEE-KRVILLANLLRKDPFLIPLAGIT 163 + L ++ E L S+P G I+ +E KR LLA+ L F+ Sbjct: 133 VTIINDLDAIRSIIEADGLLLHSQPNKGLTIEGSESDKRQFLLAHKLINASFITGGHLEQ 192 Query: 164 RDNLQHLSTACDNQHRWPLMQGDYLSS--------------LILAIYALRNQLTDEWP-- 207 DN C + + LS A TDE P Sbjct: 193 HDNTSLEHILCKIVNEQEHVHNRTLSEAAFTRTVHYLLICVNRCHCGAYIEAPTDENPSP 252 Query: 208 ---QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN---VQGLLQRVPG 261 + + +K + ++ L + N + + +Q S + +Q L ++ Sbjct: 253 NYLELSQEIMKYVSQYCHLTVTRNEQQAFASFLARQRFSRGTRSEKDSLRLQLLTRQFIE 312 Query: 262 IASLNII-----DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 S + D + +N++ HL+ L+ +E ++ ++ + P AF S+ Sbjct: 313 AISSELTPSLNSDFEFFDNLSSHLISTLSQAGTESESALHTVEDIASRHPKAFQ-SVQRH 371 Query: 317 TLLREQLDI---PLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIER--- 370 L E + D I ++ ALER +N+ ++ +A ++L + + Sbjct: 372 APLFESFSHRPLTRIELDYITVHVCAALERVRNDYMAFRIVVACHAGLGTSKLLMAKLHE 431 Query: 371 --DVLNCRVIIARSLS---------------------------------ELVAIREEIEP 395 + V+ A + V + E+I+ Sbjct: 432 HFNFHIVDVVAAHDRKAMEDASADLVIATTPLDRCPLPSIVVSPILTDEDYVRLGEKIDE 491 Query: 396 LLII-------NNSHYLLDDAVNNYIT------VKNIITAAGIEQIKHFLATAFIRQQ-- 440 L + + +A+ I+ + +A ++++ + F+ Sbjct: 492 LRLHHHVPPRNTPERDINAEAIMQIISPIAEEMLPEETSAPMLQRMHRAIRRHFLEANGG 551 Query: 441 ------PERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EGEG 493 PE P + + +W+ A L+ +I + +I E G Sbjct: 552 EQAVFLPELHHLLPAAHILLDAEAHNWREAIEVGSALLLRDRNIEDTYIRAMIQTVEQFG 611 Query: 494 ENLIVN-RLAIPHCW-SEQERRFRGFFITLAQPVEVNN---EVINHVLIACAAADARHEL 548 +++ A+PH +R F L +PV + + ++ + + H Sbjct: 612 PYIVMAPNFALPHATPGAGSKRLAMQFTRLKEPVSFGHPKFDPVSFLCVLSPIDTNTHLK 671 Query: 549 KIFSYLASILCQ 560 +F+ L S++ Sbjct: 672 AMFN-LISLMKN 682 >UniRef50_D2ELR0 BglG family transcriptional antiterminator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR0_PEDAC Length = 508 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 70/485 (14%), Positives = 165/485 (34%), Gaps = 64/485 (13%) Query: 6 QLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI 63 + +I+ L + T +LA VS R+I+R I +N G+ GY+L Sbjct: 16 ETQIIYSLAKSDAYVTSNQLASLLHVSNRSIIRMIKRINLNTGGELVRS-KKGRGYKLNY 74 Query: 64 FERRSFFQLLQ--------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 +L+ + + L L L + E+ V+ + L Sbjct: 75 EAFLRNAHILKNFKAYSPIERRKEVLLKLLFKSPEKIGINTLFENFYISESVVSTDIAIL 134 Query: 116 KQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTAC 174 KQ+ ++ L +R + E L+ L+ K + + I + + Sbjct: 135 KQQLNKKGVLLINRDRT-LRVQGNESTIRKLIIRLVNKW-EVDDYSSIGTE----IPNLA 188 Query: 175 DNQHRWPLMQGDYL-----SSLILAIY--------ALRNQLTDEWPQY----PGDEIKQI 217 + + Q DY+ S + L + + ++ P +++ Sbjct: 189 KRDRDFVVGQMDYIEHKLRSPISFPYNVNLFYHLCILIKRYKSKNIKFEFGEPISTVEKE 248 Query: 218 VEHSGLFLGDNAVRTLTGLIE---------KQHQQAQVIS---------------ADNVQ 253 + + L A + L + +++ Q ++ + + Sbjct: 249 MLENNQKLSAVAGHIVDTLGDYISLKMPPIEKYYIFQYLNSARLISGSKDKELKFINLTR 308 Query: 254 GLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS- 312 LL+ + I + I + E+++ H+ + E + + ++K +P F + Sbjct: 309 LLLKNISEILKITIQGDGIEEDLSLHVEPMFKRIINGIEIKNPILEDIKLEYPNIFQSTE 368 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIER 370 + + RE + D + + +Y A +E+H + + +I+ S + + ++ IE+ Sbjct: 369 IAMKKIFREYYSSNVSDDEIGFVAIYIAKFIEQHGHNMKALIMCSSGIGTSELLKVKIEK 428 Query: 371 DVLNCRVIIARSLSELVAIRE--EIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 ++ N + S +E + LI+ + V + T ++ Sbjct: 429 ELPNLVIEDVISFRMYEKNKEKWNRKVDLILTTIATNEKVVDKPIVLVNAMFTKIDKIRV 488 Query: 429 KHFLA 433 + + Sbjct: 489 EKLIE 493 >UniRef50_UPI0001C3629C transcriptional antiterminator (BglG family) protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3629C Length = 487 Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 81/481 (16%), Positives = 168/481 (34%), Gaps = 75/481 (15%) Query: 5 RQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGK------------AR 50 RQ +I++ + T +LA+ GVS RTI DI +N L+G Sbjct: 6 RQTEIIEYIMNNVSGITGDKLAKYFGVSSRTIRNDILQINSALSGSLSLCQTEGRTVYPS 65 Query: 51 IFASGSAGYQLEIFERRSFFQLLQ----------KHDNDDRLLALLLLNTFTPRAQLASA 100 I AS GY + + F +L+ H+ +L L N L Sbjct: 66 IKASKRIGYYITQEDMEDFRAVLEGGDDRAWVIAPHNRGYAILGHALENGSCNLYDLEEE 125 Query: 101 LNLPETWVAERLPRLKQRYERTC--CLASRPGLGHFIDETEEK---------RVILLANL 149 L L +T + E + +L++ E + G I E EEK + + + Sbjct: 126 LFLSQTALREEVQKLRKMLEDKMDWTVLFLEGSQVRIVENEEKIRLSIFNIIKYEVQTHT 185 Query: 150 LRKDPFLIPLAGITRDNLQHLST--ACDN----QHRWPLMQGDYLSSLILAIYALRNQLT 203 +L + D +++ + A N Y+ + + +R + Sbjct: 186 DFNSDYLGLIFRGEYDRVEYETFVNAVKNYFGSHEILVSDASLYMVANAIYATIMRKRQG 245 Query: 204 DEWPQYPGDEIKQIVEHSGLFLGDN---------------AVRTLTGLIEKQHQQAQVIS 248 E +E V + L+ + ++ + +++ +A +S Sbjct: 246 HELTGLKAEEFVVEVLTNLLYHLKAQKVELTESDEALLKIFLYSVRLVQSEENTRASALS 305 Query: 249 ADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 + Q V S ++ +L N+ HL + + ++K +P Sbjct: 306 GVILNEFCQEVLNKYSFDLHQSDELFNNMALHLEYLIRRIDTGYRIDNPILQDIKTQYPY 365 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQ 365 A+++++ + ++ + IP+ D + + LY A LE+ + +I+ + + ++ + Sbjct: 366 AYEIAILLVPIMFKYKSIPIRDEEIAYMALYVAYFLEKVNRRLKTVIINAPRQSVCAM-- 423 Query: 366 LAIERDVLNCRVIIARSLSELVAIREEIEPLL-IINNSHYLLDDAVNNYITVKNIITAAG 424 + L++ + EI +L Y+ D V+ I+ + Sbjct: 424 -------------VCSWLNDHFQNQIEIVKVLPKHQLDQYVKDHPVDLVISTEGQRVNTE 470 Query: 425 I 425 I Sbjct: 471 I 471 >UniRef50_UPI0001C35E6F mannitol operon transcriptional antiterminator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35E6F Length = 695 Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 73/537 (13%), Positives = 174/537 (32%), Gaps = 59/537 (10%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR--IFASGSA 57 LNER KI+D++ ++ + E+A + VS RT+ ++D N L+ K I Sbjct: 6 LNERTKKIIDMILKRVGALSIQEIADELAVSTRTVYNELDRANDWLHTKHLPDIQIIRGK 65 Query: 58 GYQLEIFERRSFFQLLQKHDNDDRLL------------ALLLLNTFTPRAQLASALNLPE 105 E+ SF ++Q D + +++ L + + Sbjct: 66 IQPFTEEEKGSFEAVMQTEQPHDDYIFTPSERTRMIVCQIIVSREPVYVENLMNTCLVSR 125 Query: 106 TWVAERLPRL-KQRYERTCCLASRPGLGHFIDETEEK-------RVILLANLLR------ 151 + L + Q + L G++ID + +L LL Sbjct: 126 NTIFVDLQAVISQLHAYQLGLGYEKKRGYWIDGDPIRIRAIFFLYFNMLEPLLSSGKLRF 185 Query: 152 ----KDPFLIPLAGITR----------DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYA 197 + F + D L + + + +S+ + + Sbjct: 186 LYLDEMEFHLKQIEQVEKQLGVSYVRNDMLALAAMLPVMEKGEDSLYFTDVSTEKVKVSK 245 Query: 198 LRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQ 257 + + +P E + H ++ RT + + + + L+ Sbjct: 246 EYQLVMEYFPTLSDMEKVYLSLHFLGGRLESYSRTEADTGD------NEFALEITKNLIT 299 Query: 258 RVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 A + L+ N+ H+ L + + +++ +P FD + + Sbjct: 300 EFEREACVLFERKEDLIRNLYRHIAASLYRYRFGIQIGNPMAEDIRREYPYIFDTTRAVV 359 Query: 317 TLLREQLDIPLFDSD--LIGLYFACAL---ERHQNERQPIILLSDQNAIATINQLAIERD 371 L +Q+ + + DS+ + L+F L ER + E + ++ + A + ++R Sbjct: 360 KYLEQQIGVLISDSEVAYLALHFGAHLEYAERDEKELRILVACMNGVATGNMISHELKRI 419 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 + R++ + SE+V + + ++I + + + + + + Sbjct: 420 LPQARIVAVMAASEIV-NPQNMCDIIITSVHVKAVVPVIVVNTILNDFDRKNILN--HPL 476 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 + + F + F + E + + + Q + + + R+ Sbjct: 477 IRSRFGFIDTDALFKVVKKYVDPQHHMELRRELEKFFARQKEEKQPVLKPDIWRLTD 533 >UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9W1_9FIRM Length = 515 Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 73/506 (14%), Positives = 163/506 (32%), Gaps = 70/506 (13%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M+N R L ++ +L + T ++++ VS +TI D+ + L G Sbjct: 1 MVNNRFLDVIKILLEHDDYITINAISKRLQVSNKTIRNDLKQVEEWLKENDLTLVK-KTG 59 Query: 59 YQLEIFERRS----FFQLLQKHDNDDRL-----------LALLLLNTFTPRAQLASALNL 103 + I ++ L+Q+ + + L+L +LA+ L + Sbjct: 60 VGVTILGKQDAKVHVMHLMQQKNAQSIDYSPQFRKIYIGMRLILCPQNCRIYELANELYV 119 Query: 104 PETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGI 162 + + L L E L + G ++ E +L L+ D + Sbjct: 120 SRATIHKDLLALAPMLETYKITLHRKNNNGLSVEGKERNYRAMLLELMNHDNGYQKFTAM 179 Query: 163 TRD------------NLQHLSTACDNQHRWPLMQGD-YLSSLILA--IYALRN------- 200 +D L ++ + + YL +L+ L + Sbjct: 180 IKDPDFPCTGDFVFPALDYIDDEIKEFLQVLKHSENSYLHTLLCPSLFQVLLHLFICFIR 239 Query: 201 -------QLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS----- 248 L+D + + + + + E ++ Q +IS Sbjct: 240 VREGHYVSLSDPFIEELKSKPFYEETKKLIQALEEYYHISFSETEIRYLQVFLISLQSSS 299 Query: 249 --ADNVQ--------GLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSS 297 A + Q L+ + + D +L + HL + Sbjct: 300 DTAKDEQEEARELSDLLIAEWEKHLNYSFHEDTELKSALYAHLCPAITRFRHGISIENPL 359 Query: 298 MNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLS 355 M +K + F ++ +L E+ P+ D + L+ A ALER + + +++ Sbjct: 360 MYEIKTLYKNTFSIAKASAHILTERYQAPISDEEIGYFALHLAMALERAKKPLRTVLICH 419 Query: 356 DQNAIATINQLAIERDVLNCRVIIARS-LSELVAIREEIEPLLIINNSHYLLDDAVNNYI 414 D ++ + + + ++ +S L+ EI+ +L + D +I Sbjct: 420 DSSSATKLLKRKLMTQFPELDIVAVQSYLTVHDFPFHEIDLILSTMELNLDNDIP---FI 476 Query: 415 TVKNIITAAGIEQIKHFLATAFIRQQ 440 + ++ I +K + + F ++ Sbjct: 477 VINPLLYDCDIAHLKTIITSYFQKKN 502 >UniRef50_B0MBK6 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MBK6_9FIRM Length = 697 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 108/673 (16%), Positives = 223/673 (33%), Gaps = 118/673 (17%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTL----------NGKA 49 +N+R +IV LL ++ T A+ VS +TI D+ +N L Sbjct: 1 MNQRSTEIVQLLSKEKDEITVSGFAEYFQVSQKTIRNDLKEINTILNQNQREEVLIQSGG 60 Query: 50 RIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLN--TFTPRAQLASALNLPETW 107 RI + L + F+ + + +++N + A +A L + Sbjct: 61 RINPPENFKESLSLLLEGDFYNYKLSRKERRQAASAMIVNSADYITLATIADHLFVSRAT 120 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 V L +K + S G I+ E ++ L NLLR P L Sbjct: 121 VINDLKDIKAFIREGNLNVISHANKGLRIEGAESEKRNFLLNLLR--PSLSIYENHKNVV 178 Query: 167 LQHLSTACDNQHRWPLMQGDY------------LSSLILAIYAL--RNQLTD-------- 204 +H+S + + G+ +IL + + RNQ+ + Sbjct: 179 AEHVSVQAGDSSVIQKILGEQEQRYKKYLDDSSFREIILYLRIMVNRNQMGEFLEPQPDT 238 Query: 205 --EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIE-------KQHQQAQVISADNVQGL 255 E + D +K I ++ + ++ ++ + ++ + + VI + Sbjct: 239 NSENYMFALDTLKYISQYCDVVTTEDDIKYFSRFLDGVRYMNNSRFSKNTVIIQMITRQY 298 Query: 256 LQRVPGIASLNI-IDAQLVENITGHLLRCLAAP---VWIAEHRQSSMNNLKAAWPAAFDM 311 + + +++ D EN++ HL +AP + + + + A + Sbjct: 299 ISGISSELGIDLNADYDFFENLSNHLGSIFSAPPIDYQEVDVINEVLEDNQDVLEAVNNQ 358 Query: 312 SLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERD 371 QL+ + I ++ A+ER +N+ ++ +A ++L +E+ Sbjct: 359 MFVIYQYTERQLN--EIEIKYIAVHVCAAIERKKNKEVAFRVIVACHAGIGTSRLLLEKL 416 Query: 372 VLNCRVIIARSLSELVAIREE-----------------IEPLLIINNSHYLLDDAVNNYI 414 + + + +S A+ E +E +++ + V N I Sbjct: 417 KRHFKFRVVDVISAHEAMSIEPNAADFVISTVPLEGCSLEYVVVSAAFNDADYIRVGNRI 476 Query: 415 -------------TVKNIITAAGIEQIKHFLAT------------AFIRQQPERFFS--- 446 + I++I + + +R+ +F Sbjct: 477 DALRNCRNFPVRMEEDGLSAKGLIDEIHPLVYSMIEPEEKAKTFMKELRRVIRDYFKQSV 536 Query: 447 --------------APGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EG 491 P +V E W+ R+ +LV + +I + +I E Sbjct: 537 ENETEVLSPYLHHLLPAMNIEVDVECEDWKDAVRKSGEKLVERGYIESRYIDAMIHSIEE 596 Query: 492 EGENLIVN-RLAIPHC-WSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE-- 547 G ++++ A+PH E R I L PV E ++ + C + H+ Sbjct: 597 YGSYVVLSKGFAMPHAKVEEGSIRLGMHLIRLKNPVPFGVEELDPIEFVCCLSAIDHKSY 656 Query: 548 LKIFSYLASILCQ 560 LK F L ++L Sbjct: 657 LKAFFSLVNMLRD 669 >UniRef50_B3W851 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2:PRD n=1 Tax=Lactobacillus casei BL23 RepID=B3W851_LACCB Length = 621 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 92/640 (14%), Positives = 217/640 (33%), Gaps = 87/640 (13%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +NE+ +++D+L QQ T +L++ GV+ R+I + LN + + + S + GY Sbjct: 1 MNEKIKQLLDILLQQKSYLTALQLSEMLGVTERSIRNYVRILNSS-ETQDPLIVSSNKGY 59 Query: 60 QLEI-FERRSFFQLLQKHDNDDRLLALLLL----NTFTPRAQLASALNLPETWVAERLPR 114 +++ S L D+ D L + L+ +TF LA LN + ++ Sbjct: 60 RIQRDLYTESIENRLFAKDDADLLFKIALILMNQSTFITFDDLAVQLNYSVESIRSKVQA 119 Query: 115 LKQRYERT---CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLS 171 L + L SR G I E ++ +LL LIP+ I + NL + Sbjct: 120 LFSKIHDMNLHVTLESRIFTGIRILGEENQKRLLLE-------QLIPIEEIVKGNLTEST 172 Query: 172 TACDNQHRWPLMQGDYLSSL-----------------------ILAIYALR-------NQ 201 + +SS+ I+A+ + ++ Sbjct: 173 FKLLGKLSSKEAINTEISSIDTVFSRHHTTMDFIVYAKIICHMIIAVSRYKDGHSISLSE 232 Query: 202 LTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLT--------------GLIEKQHQQAQVI 247 + +P ++ + + +N T+ + + +Q + Sbjct: 233 VGSNNKSHPEFQLASSLLAMSVLPINNEAETMALTNYLIALPLNMPGAFVPEMNQLQR-- 290 Query: 248 SADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 + ++ L+R + + + + I H++R L K + Sbjct: 291 --NRLEASLKRAEEYYGIPLYSNERYRAQIMNHIMRLLDPLEESIPIFNPYSKQTKREYL 348 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACAL-ERHQNERQPIILLSDQNAIATI 363 A+ ++ L + + +S+ + ++ L E +N Q ++ + A + Sbjct: 349 FAYSIACFLYDDLESDFRLQIPESEIAYLAIHIQLVLTEETKNGIQTKLVFQGKKAEGEL 408 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 + I+ + ++ + L+I + A + + + + Sbjct: 409 FRYKIQTYFPRIDIKTVTPT--MIQADLQKYQLIIRCGFQEPVA-ANSKIVEISKGMNTR 465 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEA 483 I +I++F+ T S Y ++ S + + + + + Sbjct: 466 DIAKIQNFVETV-------GTASLIQQLDYHHMNESSSESAIEYLLKKSGYFNLL--PYF 516 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP-VEVNNEVINHVLIACAAA 542 Q RE I + +A+PH + + I + + + ++ + ++I A+ Sbjct: 517 Q---KRESMSPTDIGHLVAMPHPFLKGSETTAKVIIGINRTEIPWGHQKVRLIVIYIPAS 573 Query: 543 DARHELKIFSYLASILCQHPAEI-IAGLTGYEAFMELLHK 581 D + F+ + + E F+++ ++ Sbjct: 574 DLKTNKNFFNDVYEHTSNLAEVHALLETKTKEEFIKVWNR 613 >UniRef50_B0P028 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P028_9CLOT Length = 651 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 117/323 (36%), Gaps = 14/323 (4%) Query: 270 AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFD 329 +L + I L + ++ +++ +++ + L + L E+L L Sbjct: 331 RELEKQIATFLKKISIRHDYMLVEWDDLHKDVQQQIQSSYAVCLTYSFHLEEKLGFVLTQ 390 Query: 330 SDL--IGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELV 387 ++ + L A +E+Q I +++ A + IE ++ N +I + + Sbjct: 391 DEIAWLALLIHQASMETGSEKQGIFVMATDPYSAKYEAMKIENEISNLEIIKIVHIHDFK 450 Query: 388 AIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSA 447 + + ++ ++ + V + I Q+ + Q E A Sbjct: 451 PELTKGKLVISTVPLKEKRNNVIEITKHVTQLDINKIISQMDEYAQEMKNEQVIETVKKA 510 Query: 448 -PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHC 506 + + + Q+ L+ Q ++ D +++ E I +++A+ H Sbjct: 511 FQKELIVIDALATTKKETIAQVSKLLLEQGCLSEDVTEKVFELEERRPTTIGSQIAMAHV 570 Query: 507 WSEQERRFRGFFITLAQPVEVN-NEVINHVLIACAAADARHEL-KIFSYLASILCQHPAE 564 + + ++ + + PV+ + + + V + +E+ K+F YL +++ E Sbjct: 571 YKDSVKKSGIAVMRMKYPVKWSRSSKVKLVFFLAINMEESNEILKLFKYLYALIDNK--E 628 Query: 565 IIAGL-------TGYEAFMELLH 580 I + YE ME H Sbjct: 629 DIQKILEANSSGEIYELLMEEFH 651 >UniRef50_C3WDH7 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH7_FUSMR Length = 675 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 94/640 (14%), Positives = 213/640 (33%), Gaps = 96/640 (15%) Query: 1 MLNERQLKIVDLLEQQPRTP--GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML R KI+ L Q + ++A+ VS RTI ++D +N LN + +I + Sbjct: 3 MLTSRSTKILKFLLSQDKKIFLKDIAEYFKVSERTIRYELDKINEELNKENQILLNKGEC 62 Query: 59 YQLEIFERRSFFQ-----LLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLP 113 + I E + + + +L + L ++ L+ L++ + V L Sbjct: 63 FIENIEEIEKILNENTPYIPSSKERELFILLNICLIRKIKQSTLSDFLDISISTVKAHLR 122 Query: 114 RLKQRYE-RTCCLASRPGLGHFIDETEEK-RVILLAN---LLRKDPFLIP------LAGI 162 +++ + L P G I+ +EE+ R L R+ + L I Sbjct: 123 DIRKVLDVYGLKLEILPKKGLVIEGSEEQIRQCTLKAITLCKREKSKFLDNIIYEYLGDI 182 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSG 222 ++ ++ C Q + D +IL L + + +E++ Sbjct: 183 NQEGIKLFINYC--QKLMEKIISDEAYDIILKYITLVIYFNKNDNKIKNIKNSNFLENTK 240 Query: 223 LF-LGDNAVRTLTGLIEKQHQQAQVISADN------------------------VQGLLQ 257 + + L G E + + + + + V+ ++ Sbjct: 241 EYEAIIQSKALLEGFYEMEFSKEEYLKITDYFLGSHTYNITYSYYENWVEIEIMVKSFIE 300 Query: 258 RVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 +V ++I D L+ + H+ + E S + ++P F + + Sbjct: 301 QVNKELEVDIANDETLILGLINHIKPTIYRIKNGIELENSIYGEVVESYPNLFSIIKKAV 360 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERH---QNERQPIILLSDQNAIATINQLAIERD 371 L + I + + + ++F A++R+ + E+ ++++ ++ +D Sbjct: 361 EKLENFIGITFTNDEIAFLTIHFKAAIDRNIKIKKEKLKVLIVCGSGYGSSKLLAQQIKD 420 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE----- 426 + ++ A L + + LI+ + + I V I++ I+ Sbjct: 421 IYRVEIVDAIPRYLLEKVERRKDIDLILTTVPLDNFNTNRDVIRVNPILSKEDIQSLDNY 480 Query: 427 --------------------------------QIKHFLATAFI----RQQPERFFSAPGS 450 +K+FL T I +++ F P S Sbjct: 481 PVPRDNKKILFSQLIKVLEDNSNIVVTEKLLKSLKNFLDTKLIDDICQKKNTIFDLLPES 540 Query: 451 FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA--REGEGENLIVNRLAIPHCWS 508 + ++W+ + L+ I D ++ +E L V + PH + Sbjct: 541 RIIIKGKAKNWEEAIIETGNLLLRDGCIKEDYIDEMVKIVKEFGNYILFVPGVIFPHAKA 600 Query: 509 EQ-ERRFRGFFITLAQPVE-VNNEVINHVLIACAAADARH 546 + + + ++ ++ IN V+ C+ H Sbjct: 601 KSKVSKTGFSLAIYEEGIDFIDGNKINVVISFCSQDGREH 640 >UniRef50_A6LQ03 Transcriptional antiterminator, BglG n=3 Tax=Clostridium RepID=A6LQ03_CLOB8 Length = 683 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 99/649 (15%), Positives = 216/649 (33%), Gaps = 94/649 (14%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIF 64 +Q + +L + L + +S RTILR++ +N L + + Sbjct: 8 QQFILSTVLNEGTFNIKRLHKDLDISERTILRELSSINKRLKKNSITIFNDENMNLSISG 67 Query: 65 ERRSFFQ------------LLQKHDNDDRLLALLLL-NTFTPRAQLASALNLPETWVAER 111 + + + LL K ++ LL+ N + N+ ++ Sbjct: 68 NKENIEEIKKSLDMVPIPWLLSKEQRQIVIICELLVSNEPLKASYFCHKFNVVMGSISLD 127 Query: 112 LPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN---- 166 + +++R + C+ + G I +E + L L L D Sbjct: 128 IDNIEERLISKNLCVIRKRSYGISIQGSEWNKRNALVELFFDFKPFEDLIAFLYDEKVDP 187 Query: 167 -LQHLSTACDNQHRWPLMQ-------GDYLSSLILAIYALRNQLTDEW-----------P 207 ++ L L++ DYL + ++L Q+ P Sbjct: 188 IVKTLFNIVFGNEAIQLVKDILKDIDFDYLKGNDVKYFSLFIQVLLSIKKTKNGEIIYLP 247 Query: 208 QYPGDEIKQIVEHSGLFLGDNAVRTLTG-------------------LIEKQHQQAQVIS 248 Q + I + E+ + + ++ +H I+ Sbjct: 248 QEIKNSILSLEEYKKIQYLGSVLQKNNIDICEDELVYLCLYLSDYKYFFNNKHLIESDIN 307 Query: 249 ADNV-QGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 +N+ + + + + ++I D QL+ ++T H + + +N +K + Sbjct: 308 YENIAKEVTEEISTKIYVDITKDEQLIRDLTQHFKQTFYMLNLGLKVINPLINEIKEHYS 367 Query: 307 AAFDMSLHFITLL--REQLDIPLFDSDLIGLYFACALERHQNER---QPIILLSDQNAIA 361 + + + L+ R IP + I ++ A A+++ Q + ++L A Sbjct: 368 ELYKIIKNTCRLIFSRYNFKIPPEEVGYITMHIAVAVQKQQAMSKNIKALVLCPSGIGTA 427 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 I ++ VI SL ++ +I ++ + LI++ L +N I V + +T Sbjct: 428 RILCSKVKSIFNEINVIDVVSLHDINSIIDKNKYDLILSTVPVNL-KTKHNLIVVSHFMT 486 Query: 422 AAGIEQIKHFLATAFIRQQPERFFSA--------------------PGSFHYSNVRGESW 461 IE I +F++ F ER +F +S+ Sbjct: 487 EVDIENISNFISN-FKASNNERELELFAQTKDNTVTNHEYELANTMVKNFQLKKSDSDSF 545 Query: 462 QHITRQICAQLVAQHHITADEAQR--IIAREGEGENLI-VNRLAIPHCWSEQERRFRGFF 518 ++ I + T E R I RE G +I +A+ H S+ Sbjct: 546 INLINYIVDDIHKIDIGTDKEVIRDLIFKREENGNVVIPGTHVALIHTRSDTITAPFVGV 605 Query: 519 ITLAQPVEVNN------EVINHVLIACAAADARHELKIFSYLASILCQH 561 + +P+ + + +V +++ ++ + LKI ++ L + Sbjct: 606 YRINKPLSMKSIGFSTEDVDTFIVMFARNTESNYILKILGKISVSLIEK 654 >UniRef50_B0MJJ5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MJJ5_9FIRM Length = 647 Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 89/644 (13%), Positives = 195/644 (30%), Gaps = 74/644 (11%) Query: 2 LNERQLKIVDLLEQQPR--TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-G 58 L+ RQ +++ L+ + T ELA+ VS RTI DI +N +L + S G Sbjct: 6 LSLRQRQLIHFLQLRTTYTTGEELAEHLHVSSRTIRHDIIEINDSLKNTSICILSKRRWG 65 Query: 59 YQLEIFERRSFFQ-------LLQKHDNDDRLLALLLL-NTFTPRAQLASALNLPETWVAE 110 Y L+ + Q L K + L L L + + + T + Sbjct: 66 YLLKADCEKELKQLLHMTTSFLSKEERVRHLAFRLCLAESNLNLYDFEEEMFVSRTTLEH 125 Query: 111 RLPRLKQRYE--RTCCLASRPGLGHFIDETEEKRVILLANLLR----------------- 151 L L+ + R +E E K+ +L +LL Sbjct: 126 DLKELRASFTQKDPYIKLIRNKTFISFEENERKKRYILNHLLSDHWNYSSTGTMYSENFY 185 Query: 152 ------------------KDPFLIPLAGITRDNLQHLST---ACDNQHRWPLMQGDYL-S 189 K ++ + + NL N M+ Y+ S Sbjct: 186 LDAKILRLIIQETNYYLAKYHIIVEDINMIKLNLAIAIMYYRIISNHPVTEEMELTYVDS 245 Query: 190 SLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA 249 ++ L N L + G E + ++L + R L Q Sbjct: 246 EILHPANCLLNSLEKKLNCSFGTE-----DRKDIYLIISCARLLDAKKLTFKTVGQYFDP 300 Query: 250 DNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQS---SMNNLKAAWP 306 ++ + I ID E+ +L+ + +N +++ Sbjct: 301 SILKLTDAYIQQIQQNFHIDFSANEDFYITILQHFRYLSLPLHYFNEISLQVNAVRSNIL 360 Query: 307 AAFDMSLHFITLLREQLDIPLFDSDLIGLYFACA-----LERHQNERQPIILLSDQNAIA 361 +++ L L +++++ L F A +++ +++ Sbjct: 361 IELEIAYSVQELAHSYYQRYLNETEILYLAFCIAGALRYYNYTVPKQKTVVMCHLNLPSI 420 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHY-LLDDAVNNYITVKNII 420 + I + I + + + LI+N S + +D + I++ Sbjct: 421 WDLKYRILDKFKDYLEITELLPIHMKDTFDFSDTDLILNTSGKEITNDTDCHCISISPFF 480 Query: 421 TAAGIEQIKHFLATAFIRQ-----QPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 T + + I Q P + + + W++I + + Sbjct: 481 TIEDQNNVNTHIINQQIHQFYDDSLPSSLDLLENGCWHERIDTQDWKYIIELLFSDFSEN 540 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 +++ + ++ RE + + I + + TL +++N+ + Sbjct: 541 RYVSDNYLADVLQRESILSFSLQPSVTIAYSMKASSK-TVLSIATLEHRIKINSHKTRII 599 Query: 536 LIACAA-ADARHELKIFSY-LASILCQHPAEIIAGLTGYEAFME 577 ++A + ++ + L S + + + + F E Sbjct: 600 ILAAFRLEERTMLFRLINELLYSGANLNDSRFLKTKEEFLDFFE 643 >UniRef50_D1AV48 Transcriptional antiterminator, BglG n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV48_STRM9 Length = 642 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 96/653 (14%), Positives = 229/653 (35%), Gaps = 85/653 (13%) Query: 1 MLNERQLKIV-DLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 M+NER+++I+ LLE+ + + VS RTI +++ +N+ L+ K G Sbjct: 1 MINEREIRILERLLEENVLNLENICEYFRVSKRTIQYNLNNINYFLSKKGFSKIGIKNG- 59 Query: 60 QLEIFERRSFFQLLQKHDN------DDRLLALLLLNTF----TPRAQLASALNLPETWVA 109 + I + + L+ + DDR+ + L + + L+ +++ + Sbjct: 60 NILISSKLELKEFLESIKDKEYISRDDRITLIYLYALYNKNGLNISSLSKKIDISRNTLK 119 Query: 110 ERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDP------FLIP--LAG 161 + L E+ + SR G+F+D T K++ L + K +I + Sbjct: 120 LDMNLL--DGEKFQYIYSR---GYFLDWTNNKKIEFLDEIYNKKSLQKYIKEVIDFEIMK 174 Query: 162 ITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHS 221 + L+ LS + + + LI+ IY + +++ Sbjct: 175 KVENFLKTLSVSIK-----LNINEEIYQKLIITIYTMIKFPEKNNTSTKFSLDEEMGNIK 229 Query: 222 GLFL--------GDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQL 272 +F+ + L GL + ++ + + ++ +++ V +++ D L Sbjct: 230 EIFVEYFGSHSSFEKIAEMLIGLSINPNFESWLDESFLIKKMIKSVGDEIGIDLTEDKIL 289 Query: 273 VENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDL 332 + + H+ + + + S L + I + E +I + ++ Sbjct: 290 YDFLLTHIKVSIYRLKKGIKLKNSIYQQLVLENNPIIPIIKASIVEMEEIFEIKFTEIEI 349 Query: 333 --IGLYFACALERHQ--NERQPIILLSDQNAIATINQ-----------------LAIERD 371 I +F ++ER + N ++ I++ + I + I++ Sbjct: 350 SLIAYHFKASIERMKTFNRKKVILVCGLGYGTSRILEYNLKEKFDIDIVDVIPAYMIDKI 409 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 LN I ++ +I PLL + + L + ++ +++I++ Sbjct: 410 NLNSVDYIISTIDLENFDFIKINPLLNVEDYEKLDKLGIKRRQ--DKVLVDDLLDEIENN 467 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGE-------------------SWQHITRQICAQL 472 + + + + E +W+ + L Sbjct: 468 DINFDRNKLKNTLLDKFSNILVDSFKSESKLIKALNKNSVIFRKNVSNWEEAIELLGNNL 527 Query: 473 VAQHHITADEAQRIIAR-EGEGENLIV-NRLAIPHC-WSEQERRFRGFFITLAQPVEVNN 529 V++ IT + + + G +++ + +A+PH + + + L + V+ Sbjct: 528 VSKCSITNEYIDEMKKMVKKLGPYIVIYDGIALPHAKFEHSVMKTDASLLILEEAVDFGK 587 Query: 530 EVINHVLIACAAADARHELKIFSYLAS-ILCQHPAEIIAGLTGYEAFMELLHK 581 VL+ ++ D L++ IL + E I+ + YE M + Sbjct: 588 GKKAKVLLCFSSKDNNSHLELLGDFYKLILNEKFLEDISRIKTYEKLMSYFKE 640 >UniRef50_UPI0001694250 transcriptional antiterminator, BglG family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694250 Length = 252 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 105/260 (40%), Gaps = 20/260 (7%) Query: 325 IPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI-ATINQLAIERDVLNCRVIIARSL 383 IP ++ I L+ A A+ER ++++ + +L+ N++ A + + + R + + + Sbjct: 9 IPEQETGYIALHLAHAMERLKSKKMKVAILNTGNSVTANLIKYRVLRRIPEIDIQGIYTT 68 Query: 384 SELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPER 443 + E ++ +L I + +++T +E I + ++ Sbjct: 69 DTIEYCPENVQLILSTFPYESKR----RKVIVIHDLLTREDLEIINRSVNIGIMKN---- 120 Query: 444 FFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAI 503 P F N + + + + + +H++++ ++ RE + ++ AI Sbjct: 121 -ALHPDWFFRGNEK--TKEQFLNAMLKAIGKEHYLSS-----LLEREALSSTEVGHKSAI 172 Query: 504 PHCWSEQ-ERRFRGFFITLAQPVEVNNEVINHVLIAC-AAADARHELKIFSYLASIL-CQ 560 PH + E++F +P+ N+ + V + D + ++F + ++ + Sbjct: 173 PHPLVKMKEKKFSIHIGINEKPILWGNKYVQLVFLFFPTDTDREYYERLFREVYQLVTSE 232 Query: 561 HPAEIIAGLTGYEAFMELLH 580 E + ++ F++ L+ Sbjct: 233 ARVEQLIWAKTFDEFIQQLY 252 >UniRef50_C2HE82 BglG family transcriptional antiterminator n=4 Tax=Enterococcus faecium RepID=C2HE82_ENTFC Length = 494 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 73/488 (14%), Positives = 169/488 (34%), Gaps = 59/488 (12%) Query: 5 RQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 R+ K+V LL +Q T ELA S +T+ R + +N I + GY+L+ Sbjct: 7 RENKLVLLLSKQNHYMTSEELADLLDTSTKTVYRLVKKINTEFQNGHLILSEKGKGYKLD 66 Query: 63 IF-------ERRSFFQLLQKHDNDDRLLALLLLNT--FTPRAQLASALNLPETWVAERLP 113 E + L ++ +R++ LLL++ ++L +A + ++ ++ Sbjct: 67 YEKFIERNKETNNLSISLSPNERQNRVMEELLLSSPRAIRISELFNAYEVGDSAISNDEK 126 Query: 114 RLKQRYERTCCLASRPGLGHFIDETEEK----------RVILLA---------------N 148 + Q+ + R I EE R+ +L + Sbjct: 127 SIAQKLRKFDLQLIRKNRTLAIKGLEEDIRSGLAEVIWRMNILDIDEINASKTFNFNRYD 186 Query: 149 LLRKDPFLIPLAGITRDNLQH----------LSTACDNQHRWPLMQGDYLSSLILAIYAL 198 +L L + I L + ++ R + + L++ + + Sbjct: 187 VLFVSDQLKLIEKILEGGLPYPYNVNIFSHLYILISRSRKRSAPAREEELTTEQIEFFEK 246 Query: 199 RNQLTDEWPQYPGDEIKQIV----EHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG 254 NQ+ + K + + +L V + K+ ++ Sbjct: 247 DNQIKKTAEIVIQNVEKYLATSLSVNESYYLYQYLVSSRMEKTTKEIKKFPEEVEKITTY 306 Query: 255 LLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 L++V ++ + + + ++ H+ + + ++ ++ + ++ Sbjct: 307 YLEKVGKRINMKVTNESIFIDLANHIKPMINRLKNRIHVKNGLLDQIQLTYEKIYNSVSE 366 Query: 315 FITLLREQLDIPLFDSD---LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIER- 370 + + +PL ++D I LYFA LE Q Q +I+ + + + + I + Sbjct: 367 VSKEVSQHFKLPLINADEIGFITLYFARMLETQQLPIQTLIMCTTGIGTSELLKAKIIKK 426 Query: 371 --DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 D+ VI ++ + IE +L L + + V ++TA +I Sbjct: 427 FPDLNIVDVIATKNYRTALEKNPNIELILTTVGIRSRLG---VHTLLVSAMLTADDQSRI 483 Query: 429 KHFLATAF 436 + + + Sbjct: 484 QKKIGEIY 491 >UniRef50_Q5WJH1 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WJH1_BACSK Length = 689 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 97/680 (14%), Positives = 215/680 (31%), Gaps = 100/680 (14%) Query: 1 MLNERQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ML +R L I++L+ T +L +T ++ R I D+ +N L Sbjct: 3 MLQQRSLNILELIMGNHNITMKDLEVKTLLTRRQINYDLTRINDWLLQNKFKEIKKQGKE 62 Query: 60 QLEIFERRS--FFQLLQKH-----DNDDRLLALLL----LNTFTPRAQLASALNLPETWV 108 + LL+++ + D+RL+A+ L L++ + Sbjct: 63 GFLFQNDTNEVLKALLKENVKYILNEDERLMAIYLYLYVSREEISLFHFTEMLDVSRGTI 122 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRK----------DPFLI 157 + L +L + E + L+ G+ I+ E + L+ K ++ Sbjct: 123 NDDLKKLANQLEDYSLKLSYSRLRGYHIEGEESTIKYVALLLITKLIDDNRSHYIFHLIM 182 Query: 158 PLAGITR-DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ-------LTDEWPQY 209 G++ + L + C + D L +A + L L + + Sbjct: 183 EEQGLSLFNKLTSVCKTCFYKANIHFSDNDLLKVTYIATFILMRGRGIKEDFLQENNFVF 242 Query: 210 PGDEIK----QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASL 265 G +I++ G+ ++ + L+ + + + D + L Sbjct: 243 EGHNEYAVAGEILDKLGMDHNEHIEFLTSLLLAFSIGDSYLNTPDYPMLKKIIEKIMIKL 302 Query: 266 NII-------DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 + +++E + H ++ + +K + A F + + Sbjct: 303 EVSYGIQLNSKEEVLEQVYAHFRPAYYRIIFQYPIVNPLKDKIKKQYNALFKLLKDILEP 362 Query: 319 LREQLDIPLFDSD--LIGLYFACALE------RHQNERQPIILLSDQNAIATINQLAIER 370 L +I + D + + ++FA ++ + I+ + I+ + ++ Sbjct: 363 LNLPNNITVSDDEIAYLTIHFATLIDIDVTTVNSTKMIKAAIVCPNGTGISLLLYKELKN 422 Query: 371 DVLNCRVIIARSLSELVAIREEIEPL----LIINNSHYLLDDAVNNYITVKNIITAAGIE 426 + +S+L ++R++I+ + LI L+ + N + +I + Sbjct: 423 IFPKVYFLKPIPISKLDSLRDDIDIIFSTKLIKATQPILVVSPIMNNLEKATLIKNFYRK 482 Query: 427 QIKHFLATAFIRQQPERFFSA--------------------------------------P 448 K + + + + Sbjct: 483 IGKTVVTENYYVEDLLKVIIKHAVVKRPSELKEELNNLILNYSYVDGIEGRQPMLSEIVT 542 Query: 449 GSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EGEGENLIVN-RLAIPHC 506 NV W+ ++ LV H IT + +I E G +++ +A+PH Sbjct: 543 KELIQLNVEAVDWKDAIKKSATSLVNHHKITEGYVKAMIDSAEESGPYIVITKHVALPHA 602 Query: 507 WSEQ-ERRFRGFFITLAQPVEVN---NEVINHVLIACAAADARHELKIFSYLASILCQHP 562 E TL +PVE N+ + +V A + H + S L +L H Sbjct: 603 RPEDGANELAISITTLKKPVEFGNSENDPVKYVFCLSALDNITHLNAL-SELVGLLGDHA 661 Query: 563 -AEIIAGLTGYEAFMELLHK 581 E + + + K Sbjct: 662 FYETLEKAKEPSEIINFIEK 681 >UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Geobacillus RepID=C9RTV4_GEOSY Length = 714 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 92/691 (13%), Positives = 211/691 (30%), Gaps = 129/691 (18%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTL-----------NGK 48 L+ER I+ L ++ + EL ++ +S RT+ DI+ +N+ L Sbjct: 3 LDERSTAILQELVRRDGYLSVKELIKKFNISRRTVYYDIEKINYWLKINHLDEVKYVRTS 62 Query: 49 ARIFASGSAGYQLEIF-ERRSFFQLLQKHDNDDRL-LALLLLNTFTPRAQLASALNLPET 106 + LE ++ K + RL + LL+ L+ + Sbjct: 63 GFYITERTKQAILEKLKNSEAWNYAYSKKERLARLAIHLLVEEPPHFLKDLSEKTKVSRN 122 Query: 107 WVAERLPRLKQR---YERTCCLASRPGLGHFIDETEEKRVIL------------------ 145 + L +L+ + ++ T C G E +++R I+ Sbjct: 123 TTIKDLKKLRAQLNSFQLTLCFTRYTGYVIKGKEEDKRRAIVYYLSLVIPHQQNWQTVLA 182 Query: 146 ------------LANLLRKDPFLIPLAGITRDNL--------------------QHLSTA 173 +L + ++ + NL + + Sbjct: 183 NLKRLLIHDEDESTTVLSELRNILDVLNECEKNLNIQFADDVLYHLALRFWLFGKRIVQG 242 Query: 174 CDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW-PQYPGDEIKQIVEHSGLFLGDNAVRT 232 + + A R++L + P DE+ + H + + Sbjct: 243 KKIDFDPVEKEVIQQTKEFEAAQTARSKLESIFQTSIPDDEVYYLATHLLSSKVQYSGNS 302 Query: 233 LTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVE-NITGHLLRCLAAPVWIA 291 L + ++ Q + VQ ++ + + + VE N+ HL + Sbjct: 303 LQSHDDYKNLQ------NIVQKMVTEFQAFTCITFPNRKAVEENLLLHLKPAYYRIKYGL 356 Query: 292 EHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALE----RHQ 345 + + +K + F ++ I + + D + LI ++F L + + Sbjct: 357 QVENPMIELIKTKYKDLFLITKKVIHHFETAIGKKVSDEEAALIAIHFGGWLRKEGIQPK 416 Query: 346 NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVA--------------IRE 391 ++ I++ + +TI + +E + S+ + + + Sbjct: 417 ERKRAILICASGIGTSTILRKQLEGLFSTVDFVETISVRDYEQRDFHDIDFAVSTVPVSK 476 Query: 392 EIEPLLIINNS-------------HYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIR 438 + P+ ++N H L ++ + ++Q + Sbjct: 477 KKHPVFVVNPILTDQEKETLLKKVHALFGESASQNTKYSPEAILGIVKQYADIKDEQALM 536 Query: 439 QQPERFFSAP-----------------GSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 + +F P + + ESW+H L+ IT Sbjct: 537 TALKEYFYKPSIPKNWTRKPGLLDLLSLEYIQIATKVESWEHAIELASKPLLQTGKITQQ 596 Query: 482 EAQRIIAR-EGEGENLIVN-RLAIPHCW-SEQERRFRGFFITLAQPVEVNNEVINHVLIA 538 +I + G +I+ ++A+PH E ++ + L +PV + + + V + Sbjct: 597 YVIAMINHIKNLGPYIIIAPKVALPHGRPDEGVKKPGISLLVLKEPVSFSEKKEHDVQLI 656 Query: 539 CAAADARHELKIFSYLASILCQHPAEIIAGL 569 A E+ + + C +E + L Sbjct: 657 FVLASVDPEIHLHALSILSECFQSSEFVQEL 687 >UniRef50_Q04I39 Transcriptional regulator, BglG family protein n=39 Tax=Streptococcus RepID=Q04I39_STRP2 Length = 676 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 101/677 (14%), Positives = 213/677 (31%), Gaps = 100/677 (14%) Query: 1 MLNERQLKIVDLLEQQ-PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 M + R L I+ L + EL+ + + + + IDYL L K + Y Sbjct: 1 MFDYRALVILMTLMDHCELSLYELSVKVSLPIKEVKEGIDYLVPYLANKGIVLDKKQGRY 60 Query: 60 QLEIFERRSFFQLLQKHD---NDDRLLALL-----LLNTFTPRAQLASALNLPETWVAER 111 L ++S +++ + LAL+ F L + + Sbjct: 61 SLSNRTKQSLTDIIKSDELVLPKSTRLALIYLYTFCRLDFISNNHYQDFLKVSKNTTLSD 120 Query: 112 LPRLKQ-RYERTCCLASRPGLGHFIDETEEKRVILLANLLRK------------------ 152 + L++ + L G+ + +E + L ++ + Sbjct: 121 IQSLRKIMLDNDLELGYSRAKGYTLHGSEWNKHRLAFQMVSELLESSIGIWDLDYVLSSW 180 Query: 153 -DPFLIPLAGIT-RDNLQHLSTA-CDNQHRWPLMQGDYL-------SSLILAIYALRNQL 202 L +D + L NQ + L ++ + L + + Sbjct: 181 GYSLTYDLINQVVKDYYEKLQLVPIVNQLKVCLFGLVFILCRYQRDVERVCLSETLVSPV 240 Query: 203 TDEWPQYPGDEIKQIVEHSGLFLGDNAVRT---LTGLIEKQHQQAQVISADNVQGLLQRV 259 + D + + +F D+ L+ E + A V + ++ R+ Sbjct: 241 IQDITTILLDTVVDLGIIDTVFSEDDYRYITVLLSSCFEGEVDVAPVYFNQLTEAIISRM 300 Query: 260 PGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 I+ L+ + L EN+ HL+ + + ++K +P F++ + Sbjct: 301 EDISLLHFKQREGLRENLRRHLIPAYYRLKFGLPSSNEYVLHVKEHYPDLFELVKDSLMP 360 Query: 319 LREQLDIPLFDSD--LIGLYFACALERHQNERQ----PIILLSDQNAIATINQLAIERDV 372 L + +D P+ DS+ ++F L++ Q I+ + + + + + + Sbjct: 361 LMDAIDNPIPDSETAYFVIHFGGYLKKADTLPQKCYKAAIICPNGVSSSLMLKENLLALF 420 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 I + +L ++ + ++ + + V ++T Q+ + Sbjct: 421 PQIEFIGTSKIDDL-QVKASSDYDMVFSTIKVETEKP---NYLVSVMMTEEQAIQLVELV 476 Query: 433 ATAF----------------------IRQQPERFFSAPGSFHYSNVRGE----------- 459 F I Q+ E + + N R E Sbjct: 477 LKDFPNLEYGDFEIEQILNIVKRYGIITQELELRLALKNYLYQKNDRKEIVPVLEQLITK 536 Query: 460 ----------SWQHITRQICAQLVAQHHITADEAQRIIAR-EGEGE-NLIVNRLAIPHCW 507 W+ R L+ Q IT + + +I + E G + +AIPH Sbjct: 537 ETYQVSSQKLGWKEAIRLAAKPLLDQDKITENYPEAMIQKVEEFGPFINLGKGVAIPHAR 596 Query: 508 -SEQERRFRGFFITLAQPVEVNNEVINHV--LIACAAADARHELKIFSYLASILCQHPAE 564 E + L +P+ + + V LI AA D LK S+L +IL Sbjct: 597 PDEGVNEIGMSMLVLEEPIYLLDNPEQEVRLLICIAAIDNESHLKALSHLTTILRDKNHV 656 Query: 565 IIAGLTGYEAFMELLHK 581 + ++++ K Sbjct: 657 QTLISSKNYDDIKMIIK 673 >UniRef50_C3RJP5 Predicted protein n=2 Tax=Bacteria RepID=C3RJP5_9MOLU Length = 634 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 89/631 (14%), Positives = 221/631 (35%), Gaps = 56/631 (8%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAG 58 L + +LKI+ LL P + ++A TG+ R + +I + L+ S G Sbjct: 3 LKKNELKIIQLLLASPDYISTYDIATSTGIPRRLVRDEISNVRVILSSLNLNLLSKPSKG 62 Query: 59 YQLEIFERRSFFQLLQ-----KHDNDDRL------------LALLLLNTFTPRAQLASAL 101 Y +E + +L + D ++ L+ ++ A+ L Sbjct: 63 YFIEGKSSKDLSRLQNIINDNERDENNVFPTLPKDRRNYIAKRLIEEASYIKLETFANEL 122 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + VA + LK+ + L +P G I +E + +LA+ + ++ + Sbjct: 123 LVSRPTVANDVLLLKKDIHKYGLTLIQKPNYGISIQGSEISKRKVLADWVFENLTQSDMF 182 Query: 161 GITRD---NLQHLSTA-CDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQ 216 G D N NQH+ + + LI A+ + P +Q Sbjct: 183 GDFLDAYFNSPDYQIIEIINQHQIIMSDISLIDFLICFSIAIARNTINHTIDSPIANFEQ 242 Query: 217 IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNV----------------------QG 254 + + + + + ++ + + Sbjct: 243 FKDRFEYATAKELGKYVQERFKIDFNEYEIQNITILLICKRSSRGLSASHDDNVITIANE 302 Query: 255 LLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 +L R+ + +L ++ ++ L ++ + R N++ +P + ++ Sbjct: 303 ILARIKAETLITFDTDKLFRILSLYIENTLIRQAYVEKIRTPVYENIQYEYPLPYHLASI 362 Query: 315 FITLLREQLDIPLFDSDLIG---LYFACALERHQNERQPIILLSDQNAIATINQLAIERD 371 +++ I L S+L L+ +++ +++ +++ ++ T+++ IE + Sbjct: 363 ASATIQQHSKIKLSRSELSAFTILFNNAINNQNKKKKKVLLINCMSGSMFTLHRYRIETE 422 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 + +++I + E++ +I +S + I +IT I +IK + Sbjct: 423 L-AAQLVITKYTQYYRINEEDLSNYDLIISSVPIRKQLSIPVINTSYMITNDDIIRIKSY 481 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ-RIIARE 490 L+ F + +F + SNV+ +S + + L + D + + + Sbjct: 482 LSYLFNDEDLVYYFHP--YLYSSNVKVKSKKGVASTFYHLLTCLYPNLKDTFKYELNKQH 539 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA-CAAADARHELK 549 N N + + ITL +P+ + + + +++ C + Sbjct: 540 RYTLNTFNNVIGLIKLNKPINANNNIVAITLNEPILFDQQQMQVIILFSCLDNNNIMYNT 599 Query: 550 IFSYLASIL-CQHPAEIIAGLTGYEAFMELL 579 +F+ L ++ + + + Y F+ ++ Sbjct: 600 LFNTLKNVANNELDVKKLLSHLSYPEFLSVI 630 >UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLB5_CLODC Length = 712 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 104/677 (15%), Positives = 217/677 (32%), Gaps = 133/677 (19%) Query: 2 LNERQLKIVDLLEQQ-----PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGS 56 + RQ KI+ ++ + P T E+A +S RT+LRD+ + + F Sbjct: 9 ITSRQKKIILMIVENSKKNIPITISEIAGTLELSSRTVLRDMSGIEKWFDENDFNFVK-K 67 Query: 57 AGYQLEIFERRSFFQLLQKHDNDDR--------------LLALLLLNTFTPRAQLASALN 102 G L + E + + +++ L LL+ N A L Sbjct: 68 PGVGLILEENIENQNFIIELLEEEKIEKEYSKEERNLIILSKLLVSNEPVKSYYFAKILK 127 Query: 103 LPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK---DPFLIP 158 + E + + ER L +PGLG ++ E+ NL+ + ++ Sbjct: 128 VSEGVLNNDFALASKWLERFDIELVRKPGLGVYLKGQEKNFREAYVNLIYDSFNEKEILD 187 Query: 159 LAGITRDNLQ-------------------------------------------------- 168 + +N+Q Sbjct: 188 MVRNISENIQTDKAIEILSENRLLNLMDRCIIRKVEATLTKKLSDLDVNLADSAYIGLVV 247 Query: 169 HLSTACDNQH--RWPLMQGDYLSSL------ILAIYALRNQLTDEWPQYPGDEIKQIVEH 220 H+S A M ++L L LA ++ TD P DE+ I H Sbjct: 248 HISLALQRIKNGENITMDKEFLKELSITEEFKLAKEIVKGMETDFNMDIPVDEVGYITMH 307 Query: 221 SGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQ---GLLQRVPGIASLNII-DAQLVENI 276 +R H+ + + ++ ++ +++ D +L +++ Sbjct: 308 ---------IRGAKQRSSSNHKALNLDDIEIMEITNKMIDLAEDEFKISLKNDERLFKDL 358 Query: 277 TGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD---IPLFDSDLI 333 HL + E R ++ +K+ + A+D +++++L+ IP + I Sbjct: 359 ANHLGPSINRLNMGLEIRNPLLDEIKSKYSYAYDGVEKISRIIKDKLNINSIPESEIGYI 418 Query: 334 GLYFACALERH---QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSEL-VAI 389 ++FA A+E++ ++ + IE N ++ S + Sbjct: 419 AMHFASAIEKNLMMNTNINIVVACPTGIGTSRFLSTKIENKFPNLNILETISAINIDEEY 478 Query: 390 REEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE----QIKHFLATAFIRQQPERFF 445 +E + LI++ + NYI V ++ + +IK I + Sbjct: 479 LKEKDVDLIVSTVEL---NTSLNYICVGPFMSLDDEQIIKEKIKSIAQNKLINLNAKNDT 535 Query: 446 SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITAD------EAQRIIAREGEGENLIVN 499 + + + Q ++ + + D ++ +I A+ E I Sbjct: 536 KSKNKVYEQITESMNIGKDILQFLEEIRFEKFESKDLSELIEDSSKIFAKSSEDIISIKE 595 Query: 500 R------LAIP----------HCWSEQERRFRGFFITLAQPVEVNNEVI--NHVLIACAA 541 ++IP HC SE+ + I L + +++ N V + Sbjct: 596 SLKERLKISIPYIEESKILLLHCMSERIDIMKLSIIKLENRIVLDSNEEIDNVVFMLLPK 655 Query: 542 ADARHELKIFSYLASIL 558 ++ +I S ++ L Sbjct: 656 NSPSYQRQIMSEISGSL 672 >UniRef50_C4VFI2 HTH domain protein n=23 Tax=Enterococcus faecalis RepID=C4VFI2_ENTFA Length = 639 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 88/559 (15%), Positives = 188/559 (33%), Gaps = 75/559 (13%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 +L++R + I+ +L + T ELA+ VS RTI D++ + S Sbjct: 4 LLSKRAINILLMLLDLEGSITTQELAENFTVSVRTIKYDLEDIRAWFEQHDETLYSKRNK 63 Query: 59 -------------YQLEIFERRSFFQLLQKHDNDDRLLALLL-LNTFTPRAQLASALNLP 104 + EI + F + + L+ LL + + QLA L + Sbjct: 64 GIWLDLPDSKRLLLKNEIIDVDRFETYPDQKRRVNVLIFQLLSVKGYLTAQQLADELLVS 123 Query: 105 ETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPL---- 159 + L ++++ L + G I E +L+ + +K+ + Sbjct: 124 RNTIVSDLEQVERLLQAYDLTLIRQARQGFTISGEESNVRLLMEFITQKELTEYDIYQIM 183 Query: 160 -----------------------AGITRDNLQHLSTACDNQHRWPLMQGDYLS-SLILAI 195 G R L+ + + + + LS +L +AI Sbjct: 184 NYVTKTKGAEKIPKIKFGSGTLFQGCYRSALKKMRNLINPLDQNQFDYAEILSITLRVAI 243 Query: 196 YALRNQLT---------------DEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 A R Q+ ++ + P ++++ E L L + + + Sbjct: 244 AAARMQMAHTIGTYRVLSQKTRFEQRNEVPLLLLQEVFERYDLPLLADEYFYIYSDLFGT 303 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 HQ+ ++ Q + + + D QL N+ HL Sbjct: 304 HQRQDMVQLTK-QVIESVSKELNYPFVNDRQLFTNLFAHLSLRFTKKHLFINEYNPFSEE 362 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDS--DLIGLYFACALERHQNERQPIIL---LS 355 +K PA F L ++ + + DS I L+F A ER Q E + + + S Sbjct: 363 IKGKHPALFLAIQSACKQLIQRSVLLVNDSFCAYIALHFLAAQERQQQEAKVVRIVYVCS 422 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 + ++ + I +V N + S+ + + +P L+++ + +++ +I Sbjct: 423 TGLGVTSLIEQKILEEVPNVELAGFASVLNATEVIQAEKPDLVLSI--FPIEEMTYPFIK 480 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 V ++T + I+ + + + G+ + + L+ + Sbjct: 481 VSPLLTDTDLSLIREEVDKILLGK-----RQGKGTARSTKSDVIEKNERIQS--QDLLVK 533 Query: 476 HHITADEAQRIIAREGEGE 494 +I +E +R+ + E Sbjct: 534 AYIIYEELKRMFQTKLLSE 552 >UniRef50_A6CNR6 MtlR n=2 Tax=Bacillus RepID=A6CNR6_9BACI Length = 695 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 104/666 (15%), Positives = 217/666 (32%), Gaps = 113/666 (16%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ++ R+ I+DL+ + T LA VSGRTI R++ + L + ++ + Sbjct: 2 IITSREKSIIDLIIRTSGKHTVSTLADYLNVSGRTIQRNLKSVEKILE-EYQLKLKRTTN 60 Query: 59 YQLEIFERR----SFFQLLQKHDNDDR---------LLALLLLNTFTPRAQLASALNLPE 105 L I R Q L D L+ LL + + LA+ L + Sbjct: 61 EGLFIDGRNDQIYKLIQKLTDAVPTDETPEERKLSLLVTLLHEGPYFKKQVLANHLGISP 120 Query: 106 TWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLR------------- 151 + L L + + L + G+G + E + LAN Sbjct: 121 ATLTVYLDELTDWLSKFSVLLTRKRGVGVEVSADEASKRHALANFFLVYFYEEIIESLYL 180 Query: 152 -------KDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLI---LAIYALRNQ 201 +P L + + +Q + L DY+ ++ L+I + Sbjct: 181 LQKGTHLNEPVLGYFSPENMLAVDQTVNRIFHQEQTKLTDSDYIGLVVYICLSIQRTGSN 240 Query: 202 LTDEWPQYPGDEI-----------KQIVEHSGLFLGDNAVRTLTGLIEKQHQQA------ 244 L E P + ++ L + + L+ +++ QA Sbjct: 241 LLLEEPAVSPSDYSAEYRLVERIGAELDHRISTSLMKSDIHYLSVILKGSKVQAADSIDY 300 Query: 245 -QVISADNVQGLLQRVPGIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 +I ++ +++ V +++ D L + + H+ + E +++K Sbjct: 301 DSIILGQLIKKVIEDVSTKLHVDLSDDFSLYQGLLAHMEPSIFRLKQKMELFNPLTDDIK 360 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ--PIILLSDQN 358 +P F +L E DI + + + L+F AL H+ + + +++ Sbjct: 361 KKYPVLFMAVRD--SLENEFKDIHFPEDEVAFVVLHFGSALLMHEEKVKINAVVVCPTGI 418 Query: 359 AIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKN 418 + + I++++ + SL + + + ++I D +Y V Sbjct: 419 GTSKMLASRIQKEITEINSVEILSLKDFQSASLKEYDIVISTVRLPFTD---IDYTLVSP 475 Query: 419 IITAAGIEQIKHFLAT----------------------AFIRQQPERFFSAPGSFH---- 452 +++ I I+++L R + H Sbjct: 476 LLSDKDIGSIRNYLQNNLEKLTRDERYLRTAVKASEPGKEKRPKVRDLLQEMKDVHTSIE 535 Query: 453 --------YSNVRGESWQHITRQICAQLVAQHHIT--ADEAQRIIAREGEGENLIVN-RL 501 Y + S + ++ Q +T D + RE +G I N + Sbjct: 536 SILDNFRVYRSQHAGSHFTVLNEMVEQAEKDGLLTDSKDVLHELGEREKKGGLGIPNTNM 595 Query: 502 AIPHCWSEQERRFRGFFITLAQPVEVNN-------EVINHVLIACAAADARHELKIFSYL 554 + HC SE L+QP+ + +++A A R + +I S + Sbjct: 596 GLYHCRSECIGELIFQVSHLSQPLVIKGMDGREMPMKSLLLMLAPANMSKREQ-EILSII 654 Query: 555 ASILCQ 560 ++ L + Sbjct: 655 STSLIE 660 >UniRef50_Q1WQZ9 Sorbitol operon transcription regulator n=2 Tax=Lactobacillus salivarius RepID=Q1WQZ9_LACS1 Length = 619 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 83/581 (14%), Positives = 184/581 (31%), Gaps = 56/581 (9%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 +N ++ +L T L + VS +T+ + I LN L G+ + Y Sbjct: 1 MNVLNYQLFKILTTNDSITVDRLVSELQVSKKTLQKYITSLNEEL-GEIAEIQEKNQKYY 59 Query: 61 LEIFERRSFFQL--------LQKHDNDDR----LLALLLLNTFTPRAQLASALNLPETWV 108 L++ + + L ++ R LL L+ + L+ L + + + Sbjct: 60 LKVEDYARLAKFQTHYLKTTLDFNNPLKRQAYILLMLIKSKGYMLLDDLSEYLMVSKGTI 119 Query: 109 AERLPRLK---QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 + +K + Y+ T S G+ + + + +L N + L I Sbjct: 120 NRDIKEIKLLLKDYDTTIRSVSNNGV-MLESKADCQIAFILRNFVCDYYDLGEKLAIEEK 178 Query: 166 N----------------------LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT 203 L+ L+ ++ + Y L + N++ Sbjct: 179 QEITKLVRKYNKSKTVRNLIIRHLKILNFLHEHGRKISTTPDCYYE---LTSSEVNNEII 235 Query: 204 DEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIA 263 +Y E E S L + N + ++ + + + + +V Sbjct: 236 SILKKYLHSEEITEAEKSFLLIPLNINYS--NRNTERINKRLMWIDELFAEIFSQVKENI 293 Query: 264 SLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 SL+I ++ E I H + + + + +P A D+++ + LL +L Sbjct: 294 SLDIDYNRVFEQIKYHSIFMINRSATYMRNDDLFSREIVEKYPVAVDLAIMTVNLLESKL 353 Query: 324 DIPLFDSD--LIGLYFACALE-RHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIA 380 +I + D + + LY+ +E + Q + +I L I R + Sbjct: 354 NIKISDKELGYLALYYQMEIEDEKRGNPQYHKVAIVGEVSKSIQNLIISRLNETFQGTTE 413 Query: 381 RSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ 440 + + ++ +I S + + I+ I + ++ + Q Sbjct: 414 ADIFKSSESFKKSSERYLIVFSTL----PLESKDVTTPIVRIQSIFKNDELVSKVTLSQV 469 Query: 441 PERFFSAPGSFHYSNVRGE-SWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVN 499 S F S+ + ++ + RE + N+ N Sbjct: 470 MAGISSQQVKFRIQRFEERISYLKAVENLIDTEISTGELLPGFKLDWKKREEKMSNVFQN 529 Query: 500 RLAIPHCWSEQERRFRG--FFITLAQPVEVNNEVINHVLIA 538 +AIPH + R L++ V+ + + + + Sbjct: 530 GIAIPHMVDKS-NNSRILLTVGILSKAVKYQGKEVRIIFLI 569 >UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C483_LISGR Length = 691 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 101/665 (15%), Positives = 219/665 (32%), Gaps = 110/665 (16%) Query: 12 LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNG--------KARIFASGSA------ 57 L ++ T LA VS RTI RD+ + TL G + G+ Sbjct: 15 LTSKEAITTSALADYMSVSERTIRRDLKEIETTLQGFHLELQRENTILTIEGNEADKQAF 74 Query: 58 GYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQ 117 +QL + L ++ L +L + LA+ L + V+ L ++++ Sbjct: 75 KWQLLDLSYNEYTPLERQQY---ILKTILKSDEAVKLIALANDLGVTVATVSNDLTKMEE 131 Query: 118 RYERTCCLASRPGLGHFIDETEEKRVILLANLL-------------RKDPFLIPLAGITR 164 + + + + G G + TE + LL NLL ++ P Sbjct: 132 ELDESVRIERKRGSGVRLIGTETAKRTLLTNLLGEQFSEANLFRLMQEQPEEEGAKQAAS 191 Query: 165 DNLQH------LSTACDNQHRWPLMQGDYLSS---------LILAI---------YALRN 200 + L H + W ++ ++++I Y LRN Sbjct: 192 ERLLHLIDRKLIQKVEKVLRNWRQQLEYQITDDAYISLVIHIVISIDRMLAGHFIYELRN 251 Query: 201 QLTDEWPQY--PGDEIKQIVE-HSGLFLGDNAVRTLTGLIEKQ---------HQQAQVIS 248 + +P++ + I + +E + + A + + + + Sbjct: 252 ENAKRYPEFQTAKEIIAECLEMEADVVPDGEAGLVTMHIRGAKALHYDSGDFTGNEHIQA 311 Query: 249 ADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 + L+ V + L++ +T HL L + ++K +P Sbjct: 312 VTVAKQLITSVEAKIDRRLDQQTLLKGLTAHLRPTLRRLHENMRIHNPLVKSIKQDYPEL 371 Query: 309 FDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQ--PIILLSDQNAIATINQL 366 FD+ T + + ++P + + L+F A+ + E+ I++ + + + Sbjct: 372 FDIVKAAFTEIYQSGNVPDEEIGYLVLHFGAAILQGNEEKVYSGIVVCASGIGTSRMLVT 431 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 + + + + + SL EL ++ +II+ D Y V ++T + Sbjct: 432 RLRQAIPALKKLQTVSLFELPLQMKKENYDVIISTIDLGNVD--FPYFFVSPMLTEREVS 489 Query: 427 QIKHFLATAF---------------------------IRQQPERFFSAPGSFHYSNVRGE 459 +I+ FL + +F S + G Sbjct: 490 EIEVFLNEKQANYHRHADEEEINRQTTILETVHRLENKQYYISTIIDLLNNFQVSRIEGN 549 Query: 460 SW--QHITRQICAQLVAQHHITADE--AQRIIAREGEGENLI-VNRLAIPHCWSEQERRF 514 S + R +C +++ + E + +++RE I LA+ H + + + Sbjct: 550 SSDLEDTLRALCMRIMEKDREMNVEMLIKSLLSREKWSGFGITGTNLALFHARNSEVKTP 609 Query: 515 RGFFITLAQPVEV------NNEVINHVLIACAAADARHELKIFSYLASIL--CQHPAEII 566 L + V N + V++ A+ L++ SY++++L + I+ Sbjct: 610 IFQIFPLENKMTVPAMGGDNMDASTFVVLLAPEKFAQQGLEVMSYISAMLIESEQTTRIL 669 Query: 567 AGLTG 571 Sbjct: 670 ESADS 674 >UniRef50_B0P2P0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P2P0_9CLOT Length = 698 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 114/673 (16%), Positives = 225/673 (33%), Gaps = 115/673 (17%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLN----------GKA 49 + +R +I+DLL + T LA + VS RTI DI +N L Sbjct: 1 MKKRSKEILDLLGRRENDHTISTLAAKFEVSERTIRNDIKDINDYLKEQEIKPIRFGSNG 60 Query: 50 RIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNT--FTPRAQLASALNLPETW 107 I E ++ F+ + L A +L+NT +Q+A L + Sbjct: 61 LIVMEEDISQARETTQQEDFYTYKLSKEERRMLAAAILINTKDHITLSQIADILYVSRAT 120 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETE-EKRVILL------ANLLRKDPFLIPL 159 + L +K+ E + S G ++ E +KR+ LL +N ++++ + Sbjct: 121 IINDLDEVKRMLESGKLKVISYSNKGLRLEGLEGDKRLFLLRLMSVGSNGIKENSTIRSF 180 Query: 160 -------AGITRDNLQHLSTACDNQHR-----WPLMQGDYLSS-LILAIYALRN------ 200 ++ D ++L + Q DYL L+L+I +RN Sbjct: 181 FKGLNMEIKMSEDEQRNLQKIINEQEHAYGRFMTDDSFDYLLQYLMLSIERIRNGNVMTE 240 Query: 201 ---------QLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN 251 + + +Y + + + G V +++Q ++ ++I Sbjct: 241 PIEGNKSKYAMAKDIQKY-ICQYWDLEDAKGEVDFLCGVLDSMSYVKRQRREQKIIGLQL 299 Query: 252 V-QGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 V + ++ + +N+ D EN+T HL + + R + P Sbjct: 300 VTRKFIEHISKDLGVNLNRDFAFYENLTDHLESIIMR-SFNVTQRDDFLKQYVEKNPKVL 358 Query: 310 DMSLHFITLLREQLD--IPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLA 367 ++ + +L +D I + D I ++ ALER + + +L +QL Sbjct: 359 EVVQKYKDMLSNFMDREISEIEIDYIVIHICAALERRKKKEVEFRVLIVCGGGIGTSQLL 418 Query: 368 IER---------------------DVLNCRVIIA------------------------RS 382 + + N ++I+ R Sbjct: 419 LAKMRNRFDFHVVDVVSAHLLDNEKYQNIDLVISTIPLRDYEGEYILVSPVFSDEDYLRV 478 Query: 383 LSELVAIRE--EIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI-----EQIKHFLATA 435 ++ I+E +IEP+ I DA + II + +++ F Sbjct: 479 NGKIEEIQEKHKIEPIPIQERVALPQKDAQKLIDELSQIIKDPSLMNQVTRKVQEFFGIE 538 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA--REGEG 493 Q+P + ++ W+ + L+ Q I +I +E Sbjct: 539 VEIQEPFLCELLTAADIQLDIECSDWRDAIIRSAQPLLDQGKIEDKYIDAMIDNVKENGA 598 Query: 494 ENLIVNRLAIPH-CWSEQERRFRGFFITLAQPV---EVNNEVINHVLIACAA-ADARHEL 548 +I A+PH + I L +PV +++ E+ C + D + + Sbjct: 599 YIIISPEFALPHEGFDRGCNEVGMNLIRLKEPVTIEDIDGEIAKVRFFCCMSTEDHKKHM 658 Query: 549 KIFSYLASILCQH 561 K F +L ++L Sbjct: 659 KAFFHLVNMLTNR 671 >UniRef50_C7T9J5 Transcription antiterminator BglG family protein n=1 Tax=Lactobacillus rhamnosus GG RepID=C7T9J5_LACRG Length = 494 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 74/485 (15%), Positives = 169/485 (34%), Gaps = 53/485 (10%) Query: 3 NERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 N R+ K+ L Q T E+A+ +S +T+ R I +N G I ++ GY+ Sbjct: 5 NGREYKLQLFLAQTNEFTTADEIAKHLDLSKKTVYRLIKQINNAKPGLKVIESAKGRGYR 64 Query: 61 LE----IFERRSFFQLLQKHDN----DDRLLALLLLNT-FTPRAQLASALNLPETWVAER 111 L I +R++F + + + + LLL + + +QL + ++ +A Sbjct: 65 LNHEEFILQRKTFQSDVAEISPITRQEKVMEELLLASPKWLKLSQLYEDFYVRDSTIAND 124 Query: 112 LPRLKQRYERTCCLASRPGLGHFIDETE-------------EKRVILLANLLRKDPFLIP 158 + +R +R I E V + + L Sbjct: 125 EKAINKRLSNYNLKLARKNRALQITGEEPEIRKAIVELLQTLDVVDIEDLKSTTNSELNQ 184 Query: 159 L-AGITRDNLQHLSTACDNQHRWP--LMQGDYLSSLILAIYALR-----NQLTDEWPQYP 210 + + + + + +P + +L LI + + +LT + Q Sbjct: 185 FDVALVTEQIGKIEKTLGEKVPYPYNVNLFSHLYILISRVKKVAVDTGDQKLTVQERQVM 244 Query: 211 GDE--IKQIVEHSGLFLGDNAVRTL-------------TGLIEKQHQQAQVISADNVQGL 255 DE I +I E + +G + L + + Q Q S + + Sbjct: 245 NDEPKIAKIAEKTIQSIGIYLNKQLPEVEQYYLFQYLISSRLPDQTSQVPNFSDEVTKVA 304 Query: 256 ---LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 L +V +L + + + + H+ L + + +K ++ F + Sbjct: 305 DFYLSKVGQRLNLAVNSSTIFHELANHVKPMLNRLRNGIRVKNVLLEQIKLSYQGVFKIV 364 Query: 313 LHFITLLREQLDIPLFDSD---LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIE 369 ++ ++ ++P+ D I LYFA E HQ + +++ + + + + ++ Sbjct: 365 TEVSKIVSKKFNLPVISDDENGFITLYFARMNEAHQLPIRTLVMCTTGIGTSELLKTKLK 424 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 + ++ + E E+ + +I + L + + V ++T +I+ Sbjct: 425 KHFPELEIVDVINTREYQQYLEKYPKVELIITTVGLKEKVPIASLLVSAMLTTEDQARIQ 484 Query: 430 HFLAT 434 + Sbjct: 485 KTIEG 489 >UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETM8_9FIRM Length = 711 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 93/541 (17%), Positives = 182/541 (33%), Gaps = 92/541 (17%) Query: 2 LNERQLKIVDLLEQ----QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA 57 L R KI+ +L + P T G ++++ GVS R++ R++ + + F + Sbjct: 3 LTPRADKIIRILLRFSPDSPVTIGIISEELGVSDRSVQRELPTVEKWMKHNGFCFVRKRS 62 Query: 58 GYQLEIFERRSFF---QLLQKHDNDD-------------RLLALLLLNTFTPRAQLASAL 101 L LL + D + LLL Sbjct: 63 VGLLIDETPERLKELAALLDEKDTNSSAPADNRPERLTLLCHDLLLAEEPIKSYYFTEKF 122 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLL---------- 150 + E + L +L+ + + L RPGLG FI+ TE R L + + Sbjct: 123 EISEGTLTADLNQLETWFTKYQLKLVRRPGLGVFIEGTEIARRQALTSFICKQVNEHHSI 182 Query: 151 ---------RKDPFLIPLAGITRDNLQHLSTACDNQ------------------------ 177 F+ + G + H+ C Q Sbjct: 183 GNLQDKKFLSDRNFINEIDGEVMAEVNHILGGCQKQLGMQLSDNGYLHLLVYTSLCVQRM 242 Query: 178 ---HRWPLMQGDYLSSLILAIYALRNQLTDEWPQY------PGDEIKQIVEHSGLFLGDN 228 ++ Y I YA+ + E Q+ + I V SG + + Sbjct: 243 QKGRFIKELKQSYAEISIQPEYAVSEYIMKELRQFFHLSISVDETIYMAVFISGQRIWPS 302 Query: 229 AVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAP 287 R LT + Q + ++++V I +N + D++L+ ++GH+ +A Sbjct: 303 GSRDLTDIKNLDVHQITL-------SIIKKVNEILHINFMRDSRLLTELSGHIQPTIARL 355 Query: 288 VWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI---PLFDSDLIGLYFACALERH 344 + + ++P+ + ++LL L I P + I LYF A+ER Sbjct: 356 RAGIPVENPLLKEFQESYPSVYKACEEGLSLLCPILGIKKVPASEIGFITLYFTMAMERI 415 Query: 345 QNERQPI---ILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIE-PLLIIN 400 + E + + I+ + + +++++ + + S EL IR + E L+I+ Sbjct: 416 EKEIKKLSVMIVCPTGIGSSRLLTESLKKEYPDLDIRGITSAFELDNIRLQEEGVDLVIS 475 Query: 401 NSHYLLDDAVNNYITV----KNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNV 456 + + + I+ + I+ I+ A ++ E + S +V Sbjct: 476 TVKLEIAYPYIHVNPILTRQDKILLDSRIKVIQEQKRQAQEKEIKEPEVPSDSSICRKDV 535 Query: 457 R 457 Sbjct: 536 E 536 >UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Clostridium difficile RepID=Q184U4_CLOD6 Length = 514 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 73/516 (14%), Positives = 180/516 (34%), Gaps = 85/516 (16%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNF-TLNGKARIFASGSAG 58 +N+R L I +LL T +A++ VS +TI D+ L+ L + +G Sbjct: 1 MNKRLLDIAELLLNSSDYITVDTIAEELKVSNKTIRNDLVILDEWLLEFNLSLDKKTGSG 60 Query: 59 YQLEIFERRSFFQLLQKHD---------NDDR----LLALLLLNTFTPRAQLASALNLPE 105 + E + +D +DR L L + N+ + + L++ Sbjct: 61 VIILGNEDIKLKVIRDINDKSNCIYAYSPEDRKRYILSKLFIKNSKFRIRDICNELHVSR 120 Query: 106 TWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEE---KRVILLANLLRKDPFLIPLA- 160 V + L ++ + L + G +++ E+ K + LA + + L + Sbjct: 121 ATVHKDLVVIQNFLQNFKVTLVRKTNNGVYLEGKEKDIRKAIFELATVNKSYTELKEILF 180 Query: 161 -------------------GITRDNLQHLSTACDNQHRWPLMQGDYLSSLI--------- 192 + L ++ + L Y++ LI Sbjct: 181 SKSNECKDTPSTKIFKELFNYDFEKLSQITLHTLQVEKSNLSDEYYINFLIHIAICIKRI 240 Query: 193 ----------------------LAIYALRNQLTDEW-PQYPGDEIKQIVEH-SGLFLGDN 228 L L++ + ++ +E+ I+ H GL Sbjct: 241 SIKRYINLSEGFFRELLEHEYFEKSKILCANLSEAFDVEFIDEEVCYILLHIEGLLKSIK 300 Query: 229 AVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAP 287 TL L ++ + + A V I +LN+ D L++++ HL L Sbjct: 301 KTTTLEPLKNEEITEYNLSEAIAVHW-----GSILNLNLKDDLILIKSLANHLKSVLHRI 355 Query: 288 VWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ 345 + +N++K +P + + T++++ ++ + D + + LY A++R + Sbjct: 356 NYGFTITNPILNDIKRTFPYTYKAAKESNTVIKQLMNYEVNDDEIGYLALYLISAIDRSK 415 Query: 346 NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSEL-VAIREEIEPLLIINNSHY 404 + I++ + ++ + + + ++ + LS + ++++ +L + Sbjct: 416 SPLNTILICHCSDGVSNLLVQKLSFEFNQINIVKSIPLSSISFTNFDDVDLILTTAPVDF 475 Query: 405 LLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ 440 + + N + +++ I ++ + + + Sbjct: 476 EHNAELIN---INALLSKNDISRLSTIIKKLYSEKN 508 >UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_BACHD Length = 701 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 107/702 (15%), Positives = 225/702 (32%), Gaps = 130/702 (18%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 L++R I+ L + EL Q+ VS RT+ D++ +N L + Sbjct: 3 LDQRSTFILTQLLHARSYLPIQELTQKLNVSRRTVYNDLEKINSWLEEQGLKAVYKVRSQ 62 Query: 60 QLEIFERRSFF-------------QLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 L + ER + + ++ LL L + Sbjct: 63 GLILDERAKEEIPTKLRSLKSWHYEYSAQERKAWVVIYLLTRLEPLFLEHLMDRTGVSRN 122 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK-------DPFLIP 158 + + LK L G+ I E + L L + + L P Sbjct: 123 TTIDDIKCLKDELNNFHLALEFERKDGYTISGDETDKRKALVYYLSQALPQQNWETELSP 182 Query: 159 LAGITR-----------DNLQHLSTACDNQHRWPLMQG--DYLSSLIL------------ 193 + R + LQ + + +Q D L SL L Sbjct: 183 IRIFLRTKRDNGRIFTIEELQKVYDVISESEKVLKIQYTDDVLHSLSLRFLLFMKRVAKG 242 Query: 194 ---AIYALRNQLTDEWPQY------------------PGDEIKQIVEHSGLFLGDNAVRT 232 ++ L Q+ +Y P +E+ + H + + + Sbjct: 243 KFIKVHPLEKQVLKGTKEYEAAKVMSFKLEQAFGVHYPDEEVLYLTTH----ILSSKINY 298 Query: 233 LTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVEN-ITGHLLRCLAAPVWIA 291 G IE + + ++ V ++ A + + +L+E + H+ + Sbjct: 299 ANGEIESRKESQELTHI--VTSMVNDFQKYACVVFEEKELLEKNLFFHIKPAFYRIKYGL 356 Query: 292 EHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER----HQ 345 E + ++K ++P F ++ + L + + D++ I ++F + R Sbjct: 357 EVENNIAESIKTSYPELFLLTRKVVHYLERYVGKSVNDNEVAFITMHFVGWMRREGTIPT 416 Query: 346 NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIE----------- 394 ++ +I+ ++ + + +E +I S+ E E++ Sbjct: 417 KRKKALIVCANGVGTSQFLKNQLEGLFPAVDIIKTCSIREYEKTPVEVDFIISTTSIPEK 476 Query: 395 --PLLIINNS---------HYLLDDAVNNYITVKNIITAAGIEQIKH---FLATAFIRQQ 440 P+ I+N + A++ +K ++ IK + Q Sbjct: 477 NVPIFIVNPILTETEKERLLKSVHVALDELGAMKGYSIEGLMDVIKRHGNVDDEKALYQD 536 Query: 441 PERFFSAPG-----------------SFHYSNVRGESWQHITRQICAQLVAQHHITADEA 483 RFF+ P + WQ + L+ + +T Sbjct: 537 LRRFFTQPTPIGPKQEKPDLNQLLTEDMIQLREQVTHWQEAIQLAAKPLLLKGMVTESYV 596 Query: 484 QRIIAR-EGEGENLIVN-RLAIPHCWSEQ-ERRFRGFFITLAQPVEVNNEVIN--HVLIA 538 +++I E G +I+ AIPH E R+ + L +PV +++ + HV++ Sbjct: 597 KKMIKNIEKFGPYMIIAPHFAIPHAKPEDGVRQLGMSLLWLKKPVTFSSQKGHDVHVIVV 656 Query: 539 CAAADARHELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELL 579 A+ D+ LK S L ++ + E + + + M+++ Sbjct: 657 LASVDSNKHLKALSQLTHLMSKKETMETLMTVHSKQTVMQMI 698 >UniRef50_B0K7D9 PTS system transcriptional activator n=12 Tax=Clostridia RepID=B0K7D9_THEP3 Length = 979 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 7/184 (3%) Query: 365 QLAIERDVLNCRVIIARSL-SELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 QL + ++ ++ + E+ IREE E + + + + +I+V++I+ Sbjct: 762 QLKDDYKIIPVGMLRQEDIEKEISKIREENEVVAFVGTINPGIK--SIPFISVEDILHGT 819 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEA 483 GIE++K L E + +V + ++ L + ++ Sbjct: 820 GIEKLKKILNLKVENPLKE---IIDENLILCDVDISMKSDVIDKLVELLQDKGYVDDKFL 876 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE-VINHVLIACAAA 542 + RE G + +AIPH +++ + L +P+ E + V + Sbjct: 877 LSVYKRESMGATWMKGGIAIPHGYTKNVTKSAIAIAKLKKPIFWEGELKADLVFMIALKE 936 Query: 543 DARH 546 D++ Sbjct: 937 DSKD 940 Score = 44.8 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 55/164 (33%), Gaps = 9/164 (5%) Query: 239 KQHQQAQVISADNVQGLLQRVP-GIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSS 297 + ++ V+ + S + ++ L ++ HL + Sbjct: 486 SKKDLKGIVGEKIVEAAEKAYEIAKKSFSRLEENLFYSLAIHLSATYERILSGKPIINPQ 545 Query: 298 MNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ--NERQPIIL 353 + N+ +PA + + + +L I L + + I +Y + R +++ Sbjct: 546 LENIIREYPAEYSTAKIMAKQIERELGIELPEEEIGFIAMYLRTFSGEKEIVKGRVGVVV 605 Query: 354 LSDQNAIATI----NQLAIERDVLNCRVIIARSLSELVAIREEI 393 L+ + + + N+L + + + S ++ E+ Sbjct: 606 LTHGHVASGMAEVANKLLGVNHAVGIDMTLDESPESVLERTIEV 649 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P32152 Putative phosphotransferase EIIA component n=54 ... 432 e-119 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 368 e-100 UniRef50_P46321 Putative phosphotransferase enzyme IIA component... 325 2e-87 UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostri... 323 9e-87 UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 321 4e-86 UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibaci... 321 6e-86 UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan opero... 319 2e-85 UniRef50_C6CCS2 PTS modulated transcriptional regulator, MtlR fa... 318 3e-85 UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR fa... 314 7e-84 UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collins... 306 1e-81 UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) ... 303 9e-81 UniRef50_B9Y3S8 Putative uncharacterized protein n=1 Tax=Holdema... 295 3e-78 UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 ... 290 1e-76 UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR fa... 286 2e-75 UniRef50_Q5E1U1 PTS system, mannitol (Cryptic)-specific IIA comp... 286 2e-75 UniRef50_A0AFK2 Complete genome n=18 Tax=Listeria RepID=A0AFK2_L... 286 2e-75 UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B... 285 5e-75 UniRef50_B6EP62 HTH-type transcriptional regulator n=1 Tax=Aliiv... 284 8e-75 UniRef50_O31644 Putative phosphotransferase enzyme IIA component... 284 8e-75 UniRef50_A0KQ06 Transcription antiterminator, BglG family n=1 Ta... 283 9e-75 UniRef50_C5EW03 Phosphoenolpyruvate-dependent sugar phosphotrans... 283 1e-74 UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR fa... 283 1e-74 UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_L... 283 2e-74 UniRef50_C4V215 N(Pi)-phosphohistidine--sugar phosphotransferase... 282 2e-74 UniRef50_C2FPV9 Frv operon regulatory protein n=3 Tax=Lactobacil... 281 4e-74 UniRef50_C0D9V6 Putative uncharacterized protein n=1 Tax=Clostri... 281 5e-74 UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan opero... 281 5e-74 UniRef50_A8RTN9 Putative uncharacterized protein n=1 Tax=Clostri... 279 2e-73 UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=The... 277 9e-73 UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 T... 275 3e-72 UniRef50_C0CTD3 Putative uncharacterized protein n=1 Tax=Clostri... 273 1e-71 UniRef50_D1P1R2 Transcription antiterminator, BglG family n=5 Ta... 273 2e-71 UniRef50_C5EV18 Transcription antiterminator BglG family n=1 Tax... 271 4e-71 UniRef50_C7TGG8 Transcription regulator n=4 Tax=Lactobacillus Re... 271 4e-71 UniRef50_C4FUH4 Putative uncharacterized protein n=1 Tax=Catonel... 266 2e-69 UniRef50_C5EFX5 Transcriptional antiterminator of lichenan opero... 265 4e-69 UniRef50_C7TG26 PTS system, IIAB component n=2 Tax=Lactobacillus... 263 1e-68 UniRef50_B0M974 Putative uncharacterized protein n=1 Tax=Anaeros... 263 2e-68 UniRef50_Q67QV8 Transcription antiterminator BglG family n=1 Tax... 262 3e-68 UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostri... 260 9e-68 UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacill... 259 1e-67 UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collins... 258 4e-67 UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR fa... 257 8e-67 UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 ... 257 1e-66 UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR fa... 257 1e-66 UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacteriu... 257 1e-66 UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotr... 256 2e-66 UniRef50_Q724A6 PRD/PTS system IIA 2 domain protein n=29 Tax=Lis... 256 2e-66 UniRef50_UPI000196A9D7 hypothetical protein CATMIT_00535 n=1 Tax... 254 6e-66 UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS sy... 254 8e-66 UniRef50_C9A391 Transcriptional antiterminator n=1 Tax=Enterococ... 252 3e-65 UniRef50_C4FVQ8 Putative uncharacterized protein n=1 Tax=Catonel... 252 3e-65 UniRef50_B6FYB2 Putative uncharacterized protein n=1 Tax=Clostri... 251 5e-65 UniRef50_A4AFC1 Transcription antiterminator, BglG family protei... 250 1e-64 UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing prot... 249 3e-64 UniRef50_C0X124 PRD/PTS system IIA 2 domain protein n=3 Tax=Ente... 248 3e-64 UniRef50_C2C4I7 Protein-N(Pi)-phosphohistidine--sugar phosphotra... 248 5e-64 UniRef50_C3RJ67 Transcription antiterminator bglG n=3 Tax=Bacter... 248 5e-64 UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR fa... 247 1e-63 UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Stre... 246 1e-63 UniRef50_A8RW19 Putative uncharacterized protein n=1 Tax=Clostri... 246 1e-63 UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Lis... 246 2e-63 UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdema... 246 2e-63 UniRef50_A8RJT7 Putative uncharacterized protein n=1 Tax=Clostri... 245 3e-63 UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS ... 245 3e-63 UniRef50_A8AYR4 Transcription antiterminator BglG family n=1 Tax... 245 4e-63 UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=... 245 4e-63 UniRef50_C9A1R6 Predicted protein n=4 Tax=Enterococcus RepID=C9A... 243 1e-62 UniRef50_B0MAU3 Putative uncharacterized protein n=1 Tax=Anaeros... 243 1e-62 UniRef50_C0CYQ2 Putative uncharacterized protein n=1 Tax=Clostri... 243 1e-62 UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_B... 242 2e-62 UniRef50_B9DT71 Transcriptional regulator (Antiterminator) n=1 T... 242 3e-62 UniRef50_C9A5U2 Transcriptional antiterminator n=3 Tax=Enterococ... 242 4e-62 UniRef50_A5CU91 Putative transcription antiterminator containing... 241 4e-62 UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomon... 241 4e-62 UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus ... 241 7e-62 UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax... 241 7e-62 UniRef50_C4ZB72 PRD/PTS system IIA 2 domain protein n=1 Tax=Euba... 240 9e-62 UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Cl... 240 1e-61 UniRef50_B9Y3X0 Putative uncharacterized protein n=1 Tax=Holdema... 240 1e-61 UniRef50_B1C796 Putative uncharacterized protein n=1 Tax=Anaerof... 239 2e-61 UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipe... 239 2e-61 UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Ba... 239 3e-61 UniRef50_Q3CZS6 MW0309, putative n=3 Tax=Streptococcus agalactia... 238 3e-61 UniRef50_UPI000196BD9B hypothetical protein CATMIT_02553 n=1 Tax... 238 4e-61 UniRef50_C0ES87 Putative uncharacterized protein n=1 Tax=Eubacte... 238 4e-61 UniRef50_B3W7W3 Transcriptional activator n=4 Tax=Lactobacillus ... 237 8e-61 UniRef50_B7CCL3 Putative uncharacterized protein n=1 Tax=Eubacte... 237 1e-60 UniRef50_B9Y2V8 Putative uncharacterized protein n=1 Tax=Holdema... 236 1e-60 UniRef50_A8SDV4 Putative uncharacterized protein n=1 Tax=Faecali... 236 2e-60 UniRef50_C6IZU2 PRD domain-containing protein n=1 Tax=Paenibacil... 236 2e-60 UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metab... 236 2e-60 UniRef50_Q5WJN3 Putative uncharacterized protein n=2 Tax=Bacilla... 236 2e-60 UniRef50_C6D7L7 PTS modulated transcriptional regulator, MtlR fa... 236 2e-60 UniRef50_B0MEI2 Putative uncharacterized protein n=1 Tax=Anaeros... 236 3e-60 UniRef50_B9Y2N3 Putative uncharacterized protein n=1 Tax=Holdema... 235 3e-60 UniRef50_A5Z3Q0 Putative uncharacterized protein n=1 Tax=Eubacte... 235 4e-60 UniRef50_Q3XZH6 Transcriptional antiterminator bglG:Phosphoenolp... 234 6e-60 UniRef50_C2BXP0 Transcription antiterminator n=1 Tax=Listeria gr... 234 8e-60 UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteri... 234 9e-60 UniRef50_C9XML5 Transcriptional antiterminator n=4 Tax=Clostridi... 234 1e-59 UniRef50_C5EEI0 Predicted protein n=1 Tax=Clostridiales bacteriu... 233 1e-59 UniRef50_B4U0E0 Sorbitol operon transcription regulator SrlM n=3... 233 2e-59 UniRef50_UPI00017890F3 PTS modulated transcriptional regulator, ... 233 2e-59 UniRef50_C8NFM1 PRD domain/PTS system IIA domain protein n=1 Tax... 233 2e-59 UniRef50_B3W767 PRD-and EIIAMtl/Fru-containing transcription ati... 232 4e-59 UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcu... 232 4e-59 UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collins... 231 6e-59 UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaeros... 231 7e-59 UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus... 231 7e-59 UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=... 231 9e-59 UniRef50_C9A090 Predicted protein n=2 Tax=Enterococcus RepID=C9A... 230 1e-58 UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium... 230 1e-58 UniRef50_C0CWF4 Putative uncharacterized protein n=1 Tax=Clostri... 230 1e-58 UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enteroc... 229 2e-58 UniRef50_B9YAP5 Putative uncharacterized protein n=1 Tax=Holdema... 229 2e-58 UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus ... 229 3e-58 UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 T... 228 4e-58 UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_... 228 5e-58 UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR fa... 226 2e-57 UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_... 226 2e-57 UniRef50_A8RD41 Putative uncharacterized protein n=1 Tax=Eubacte... 225 3e-57 UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli R... 224 6e-57 UniRef50_A5KJK5 Putative uncharacterized protein n=1 Tax=Ruminoc... 223 1e-56 UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostri... 223 2e-56 UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 ... 222 2e-56 UniRef50_C5WEK4 Putative uncharacterized protein n=1 Tax=Strepto... 222 2e-56 UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 ... 222 2e-56 UniRef50_D1YCX5 Phosphoenolpyruvate-dependent sugar phosphotrans... 222 4e-56 UniRef50_B0NXI9 Putative uncharacterized protein n=1 Tax=Clostri... 222 4e-56 UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR fa... 221 7e-56 UniRef50_C5ERF8 Predicted protein n=1 Tax=Clostridiales bacteriu... 221 7e-56 UniRef50_B9DVZ2 Transcription antiterminator n=4 Tax=Streptococc... 219 2e-55 UniRef50_A6VLW1 Transcriptional antiterminator, BglG n=1 Tax=Act... 219 2e-55 UniRef50_C8NIY4 Putative uncharacterized protein n=1 Tax=Granuli... 219 2e-55 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 218 4e-55 UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax... 218 4e-55 UniRef50_Q65NB6 Putative uncharacterized protein n=1 Tax=Bacillu... 218 4e-55 UniRef50_Q5WKW9 BglG family transcriptional antiterminator n=1 T... 217 6e-55 UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 T... 217 7e-55 UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdema... 217 8e-55 UniRef50_D2EIS8 Predicted protein n=1 Tax=Pediococcus acidilacti... 217 9e-55 UniRef50_C7WZJ5 Predicted protein n=7 Tax=Enterococcus RepID=C7W... 217 1e-54 UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostri... 216 2e-54 UniRef50_A6QKC9 Transcriptional antiterminator BglG family prote... 216 2e-54 UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=St... 216 2e-54 UniRef50_C4VSP6 Putative transcriptional antiterminator n=1 Tax=... 215 5e-54 UniRef50_C3RHR0 Predicted protein n=2 Tax=Bacteria RepID=C3RHR0_... 214 5e-54 UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecali... 214 5e-54 UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconost... 214 7e-54 UniRef50_UPI0001C35E6F mannitol operon transcriptional antitermi... 214 8e-54 UniRef50_Q721P5 PRD/PTS system IIA 2 domain protein n=15 Tax=Lis... 214 1e-53 UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactoba... 214 1e-53 UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbi... 214 1e-53 UniRef50_C9XL63 Putative transcriptional antiterminator n=9 Tax=... 212 2e-53 UniRef50_C9XQF7 Transcription antiterminator n=6 Tax=Clostridium... 212 3e-53 UniRef50_A8FDW3 PTS family L-ascorbate (L-asc) porter component ... 211 4e-53 UniRef50_Q5WC76 Putative uncharacterized protein n=1 Tax=Bacillu... 211 5e-53 UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactoba... 211 7e-53 UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clo... 210 1e-52 UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1... 209 2e-52 UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR fa... 209 2e-52 UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alk... 208 4e-52 UniRef50_D0BMI3 PRD domain/PTS system IIA domain protein n=1 Tax... 208 5e-52 UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Ali... 207 6e-52 UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Cl... 207 8e-52 UniRef50_C8ZX11 Predicted protein n=1 Tax=Enterococcus gallinaru... 207 8e-52 UniRef50_B0NYU6 Putative uncharacterized protein n=2 Tax=Clostri... 207 1e-51 UniRef50_C3RJI5 Transcriptional antiterminator n=2 Tax=Bacteria ... 207 1e-51 UniRef50_A5ZAB6 Putative uncharacterized protein n=1 Tax=Eubacte... 207 1e-51 UniRef50_B1CAC3 Putative uncharacterized protein n=1 Tax=Anaerof... 207 1e-51 UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paeniba... 207 1e-51 UniRef50_A6LWY3 Transcriptional antiterminator, BglG n=2 Tax=Fir... 207 1e-51 UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=... 205 3e-51 UniRef50_B0KCW5 Transcriptional antiterminator, BglG n=9 Tax=The... 205 3e-51 UniRef50_C0X3N3 Regulator of sorbitol operon n=23 Tax=Enterococc... 205 3e-51 UniRef50_Q5WJ14 BglG family transcriptional antiterminator n=2 T... 204 5e-51 UniRef50_A8RA27 Putative uncharacterized protein n=1 Tax=Eubacte... 204 9e-51 UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Cl... 204 1e-50 UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttle... 204 1e-50 UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdema... 203 1e-50 UniRef50_C2KEC2 Transcriptional antiterminator n=1 Tax=Lactobaci... 203 2e-50 UniRef50_B9DPY6 Putative transcriptional regulator n=1 Tax=Staph... 202 2e-50 UniRef50_B2TIY2 Putative transcription antiterminator n=3 Tax=Cl... 202 3e-50 UniRef50_B0NY60 Putative uncharacterized protein n=1 Tax=Clostri... 202 3e-50 UniRef50_A9QSG5 Transcriptional antiterminator, BglG family/Fruc... 202 4e-50 UniRef50_B4U065 Transcriptional regulator, BglG family n=5 Tax=L... 201 5e-50 UniRef50_B0MGN0 Putative uncharacterized protein n=1 Tax=Anaeros... 201 6e-50 UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Ba... 201 6e-50 UniRef50_B7C836 Putative uncharacterized protein n=1 Tax=Eubacte... 201 8e-50 UniRef50_B2TRB2 Putative phosphoenolpyruvate-dependent sugar pho... 201 9e-50 UniRef50_B6FXG1 Putative uncharacterized protein n=1 Tax=Clostri... 201 9e-50 UniRef50_Q180U6 Putative transcription antiterminator n=5 Tax=Cl... 201 9e-50 UniRef50_C0CZN4 Putative uncharacterized protein (Fragment) n=1 ... 200 1e-49 UniRef50_C0QXV4 Transcriptional antiterminator , BglB n=1 Tax=Br... 199 2e-49 UniRef50_B6G892 Putative uncharacterized protein n=1 Tax=Collins... 199 2e-49 UniRef50_B0MH65 Putative uncharacterized protein n=2 Tax=Clostri... 199 2e-49 UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdema... 199 3e-49 UniRef50_Q03GK2 Transcriptional antiterminator n=1 Tax=Pediococc... 199 3e-49 UniRef50_B8DAY8 Transcriptional antiterminator, BglG n=24 Tax=Li... 199 3e-49 UniRef50_UPI0001C425D1 mannitol operon transcriptional antitermi... 199 3e-49 UniRef50_Q928S7 Lin2455 protein n=4 Tax=Listeria RepID=Q928S7_LISIN 197 6e-49 UniRef50_UPI0001C369FF probable licABCH operon regulator n=1 Tax... 197 7e-49 UniRef50_C1QBY4 PTS system IIA component; transcriptional antite... 197 7e-49 UniRef50_B0P2P0 Putative uncharacterized protein n=2 Tax=Clostri... 196 1e-48 UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR fa... 196 2e-48 UniRef50_D0BLL7 PRD domain-containing protein n=2 Tax=Granulicat... 196 2e-48 UniRef50_A8RAH0 Putative uncharacterized protein n=1 Tax=Eubacte... 196 2e-48 UniRef50_A6CNR6 MtlR n=2 Tax=Bacillus RepID=A6CNR6_9BACI 196 2e-48 UniRef50_Q04I39 Transcriptional regulator, BglG family protein n... 196 3e-48 UniRef50_C0CN20 Putative uncharacterized protein n=1 Tax=Blautia... 195 5e-48 UniRef50_C0EX25 Putative uncharacterized protein n=1 Tax=Eubacte... 194 6e-48 UniRef50_B9Y7U3 Putative uncharacterized protein n=1 Tax=Holdema... 194 7e-48 UniRef50_C9ASX5 Transcriptional antiterminator n=18 Tax=Enteroco... 194 8e-48 UniRef50_C8P116 Putative uncharacterized protein n=1 Tax=Erysipe... 193 1e-47 UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostri... 193 2e-47 UniRef50_C3WDH7 Predicted protein n=1 Tax=Fusobacterium mortifer... 192 2e-47 UniRef50_C6DIT7 Transcriptional antiterminator, BglG n=5 Tax=Pec... 192 2e-47 UniRef50_C1IA41 Transcriptional antiterminator n=1 Tax=Clostridi... 192 2e-47 UniRef50_B0MBK6 Putative uncharacterized protein n=1 Tax=Anaeros... 192 2e-47 UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 T... 191 5e-47 UniRef50_Q18CM3 Putative transcription antiterminator n=8 Tax=Cl... 191 6e-47 UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacte... 190 1e-46 UniRef50_B0MAW6 Putative uncharacterized protein n=1 Tax=Anaeros... 190 1e-46 UniRef50_B0A8M3 Putative uncharacterized protein n=1 Tax=Clostri... 190 1e-46 UniRef50_C6JIT2 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 189 2e-46 UniRef50_A8S5N7 Putative uncharacterized protein n=1 Tax=Clostri... 189 2e-46 UniRef50_C7T7M7 Transcription antiterminator, BglG family / PTS ... 189 2e-46 UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-... 189 3e-46 UniRef50_C9BPG8 Transcriptional antiterminator bglG n=7 Tax=Ente... 189 3e-46 UniRef50_C7TGA7 Transcriptional antiterminator, BglG family n=3 ... 189 4e-46 UniRef50_A8AVC7 Phosphotransferase system mannitol/fructose-spec... 188 4e-46 UniRef50_Q88S25 Sorbitol operon transcription regulator n=1 Tax=... 188 4e-46 UniRef50_B0P1K3 Putative uncharacterized protein n=1 Tax=Clostri... 187 7e-46 UniRef50_D0BN54 PRD domain-containing protein n=1 Tax=Granulicat... 187 1e-45 UniRef50_Q8NVE5 MW2083 protein n=56 Tax=Staphylococcus RepID=Q8N... 187 1e-45 UniRef50_P96574 Putative phosphotransferase enzyme IIA component... 186 2e-45 UniRef50_Q5WJH1 BglG family transcriptional antiterminator n=1 T... 186 3e-45 UniRef50_C7HSJ2 Putative uncharacterized protein n=1 Tax=Anaeroc... 185 3e-45 UniRef50_C2BFG8 Transcriptional antiterminator n=1 Tax=Anaerococ... 185 4e-45 Sequences not found previously or not previously below threshold: UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotrans... 238 5e-61 UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR fa... 236 3e-60 UniRef50_Q63A16 Possible transcriptional antiterminator, bglG fa... 216 2e-54 UniRef50_Q9KGB4 BH0193 protein n=3 Tax=Bacillus halodurans RepID... 199 2e-49 UniRef50_C6J1G7 PTS system IIA 2 domain-containing protein n=2 T... 194 7e-48 UniRef50_Q5WCM9 Transcriptional antiterminator n=1 Tax=Bacillus ... 188 7e-46 UniRef50_C5F6Y5 Predicted protein n=2 Tax=Lactobacillus paracase... 187 1e-45 UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerof... 186 2e-45 UniRef50_Q1JEW2 Transcription antiterminator, BglG family / PTS ... 186 3e-45 UniRef50_C0CV60 Putative uncharacterized protein n=1 Tax=Clostri... 184 6e-45 >UniRef50_P32152 Putative phosphotransferase EIIA component n=54 Tax=Enterobacteriaceae RepID=FRVR_ECOLI Length = 582 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 582/582 (100%), Positives = 582/582 (100%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ Sbjct: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 Query: 61 LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE 120 LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE Sbjct: 61 LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE 120 Query: 121 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW 180 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW Sbjct: 121 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW 180 Query: 181 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ Sbjct: 181 PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN Sbjct: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI 360 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI Sbjct: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI 360 Query: 361 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII Sbjct: 361 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 Query: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA Sbjct: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 Query: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA Sbjct: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 Query: 541 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG 582 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG Sbjct: 541 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG 582 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 122/648 (18%), Positives = 240/648 (37%), Gaps = 80/648 (12%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKA-RIFASGSA 57 ML+ RQ +++ L +Q T E+A+ GV+ RTI D+ L TL + A Sbjct: 1 MLSLRQEELLKRLMQVEQELTSEEIARMIGVTSRTIRTDMKALKSTLAEHGAVLHIKRGA 60 Query: 58 GYQLEIFERRSFFQLLQK--------------HDNDDR----LLALLLLNTFTPRAQLAS 99 GY L + + SF L+K + +DR L LLL + LA Sbjct: 61 GYTLTVEDYGSFRTFLKKSLGERNEKKEQIIPNQPEDRVAYLLKRLLLSEDYIKLDALAE 120 Query: 100 ALNLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEK-RVILLANLLRK----- 152 L + E+ V L ++ + ++ RP G + E K R + ++ +K Sbjct: 121 ELFVSESTVKNDLKAVRHLFSLHGLSVSHRPKYGLRLTGEEMKLRYCMAEHVFQKAHANS 180 Query: 153 ----DPFLIPLAGITRDNLQ----------------HLSTACD--NQHRWPLMQGDYLSS 190 + + GI R + H++ AC + + +M L Sbjct: 181 TLLPEETYQFIQGIVRSRTKASGLYLSEIGLSNLVTHIAIACKRIEEKKIVMMPETELKE 240 Query: 191 L-ILAIYALRNQLTDEW-----PQYPGDEIKQIVEHS---GLFLGDNAVRTLTGLIEKQH 241 + + ++ + Q+ ++ ++P E+ I H + +A TL L+E+ H Sbjct: 241 IQVQPVFQVAQQMAEDIRHVLGIEFPLSEMAYIAIHLMGAKMMAYGDAGHTLFHLLEEDH 300 Query: 242 QQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 + + LL V SLNI D +L+ ++ HL + + R + + Sbjct: 301 FRF-------IHQLLAYVEEHMSLNIQFDKELIVGLSLHLRSAIHRFRYGMNIRNPYLTD 353 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLS 355 +K +P AF+ ++ L+E+ I + + + + L+ A+ER ++ +++ +I+ + Sbjct: 354 IKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEIGYLALHIGAAIERTKSQHVKKRCLIVCA 413 Query: 356 DQNAIATINQLAIERDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYI 414 A + + ++ ++ S+ E+ + II+ V + Sbjct: 414 TGVASSQLLLHKLKAAFSERMEIVGTASVGEMSSYDLR-SIDFIISTIPLQNTLPV-PVV 471 Query: 415 TVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVA 474 V I++ I ++K F+ A Q + + +S + + + L Sbjct: 472 DVHTILSDDDIVRLKRFVQGA---QDTGVLRYVSPALTFFQQDLQSREEVLQFFVNVLKE 528 Query: 475 QHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINH 534 Q I + Q ++ RE + +AIPH TL +PV + Sbjct: 529 QDRIPEEFEQLLLEREQVSPTSFGHLVAIPHPIKPATDDTFCAICTLKKPVLWGENRVQV 588 Query: 535 VLIACAAADARHELKIFSYLASILCQ--HPAEIIAGLTGYEAFMELLH 580 V + + EL+ L + + + +E L Sbjct: 589 VCLLSIQKTYQKELQSLYQFLVRLTERKEVVDQLIKAASFEELTAALQ 636 >UniRef50_P46321 Putative phosphotransferase enzyme IIA component n=2 Tax=Bacillus RepID=LICR_BACSU Length = 641 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 106/647 (16%), Positives = 225/647 (34%), Gaps = 76/647 (11%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKA-RIFASGSA 57 ML+ R I+ LL + P T A Q V+ RT+ DI L L+G + + + Sbjct: 1 MLHGRLRDILRLLMAAEAPVTSSFFAAQLNVTTRTVRNDIKELQGVLSGHGAFVQSVRGS 60 Query: 58 GYQLEIFERRSFFQLLQ-------------KHDNDDRLLALLLLNTFTPRAQLASALNLP 104 GY+L I + + F LLQ + + LLL + + +LA L + Sbjct: 61 GYKLRIDDEQVFRTLLQDEFQQKKGLPVLPEERMAYLMKRLLLADHYLKLDELAEELFIS 120 Query: 105 ETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGI 162 ++ + L +K+R + +RP G + E + R + ++ + I + Sbjct: 121 KSTLQTDLKEVKKRLLPYRIVMETRPNYGFKLRGDEVQMRYCMAEYIVDERETEIDVLNE 180 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDY-------LSSLILAIYALRNQLTDEWPQ------- 208 D L M+ D L++LI+ I ++ E Sbjct: 181 KADILPKEEIEIIRSAILKKMKNDRIPLSNMGLNNLIIHIAIACKRIRTENYVSLFPKDM 240 Query: 209 --------------------------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ 242 +P DE I H R + Sbjct: 241 DHILHQKEYQAAEAIVKELESKLSVTFPKDETAYITMHLLGTK-----RMTQSQCGEDTF 295 Query: 243 QAQVISADNVQGLLQRVPGIASL-NIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 + + +++ V L + D +L + H+ ++ + R + + Sbjct: 296 SIEEETDQLTLAMIKAVDRELKLGILHDKELKIGLALHMKPAISRNRYGMNLRNPMLAAI 355 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE---RQPIILLSD 356 K +P AF+ + +++EQ I + +++ + L+F A+ER + E ++ II+ + Sbjct: 356 KEHYPLAFEAGIIAGIVIKEQTGIEIHENEIGYLALHFGAAIERKKTESPPKRCIIVCAS 415 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 A + + + R R+ I + + E + + ++ + + + V Sbjct: 416 GAGSAQLLREKL-RSHFGKRLDILGTAEYYSLDQMSYESIDFVISTIPIKKELPVPVLKV 474 Query: 417 KNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQH 476 I+ +I+ L+ ++ + + S + + + + ++V Sbjct: 475 NTILGGTDFTKIESILS----DEKEKANRYLKKELVFFQEDLRSKEEVIQFLGQKVVECG 530 Query: 477 HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL 536 + I RE N +AIPH Q + TL +P++ ++ + V Sbjct: 531 FADEEIIDSIFEREDMSPTCFGNLVAIPHPLVPQTKTTFWAVCTLKKPIDWESQRVQFVC 590 Query: 537 IACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFMELLHK 581 + C + + +L+ L + P + Y+ ++ + Sbjct: 591 LLCVEKENKADLQSMYKLLGSILDDPAAMNQLIKCRSYQELSDVFDQ 637 >UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D786_9CLOT Length = 673 Score = 323 bits (829), Expect = 9e-87, Method: Composition-based stats. Identities = 108/628 (17%), Positives = 220/628 (35%), Gaps = 70/628 (11%) Query: 19 TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAGYQLEIFERRSFFQLLQK-- 75 T LA + VS +TI I N +G S GY L+I ++ +F L++ Sbjct: 44 TAEALAGKLKVSTKTIRNYIKEWNDWFDGYGAQIRSKHGCGYFLDIADQEAFDSRLKQLT 103 Query: 76 --------------HDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE- 120 + L LL + L+ L + ++ L +++ E Sbjct: 104 ARTHTSGQVPSTSEERVEYLLNDLLSRRDYVTIDALSDILYISRKTISADLKEVEKILEA 163 Query: 121 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDP-----------------------FLI 157 + LA RP G I+ TE R + +AN++ +I Sbjct: 164 YSLKLAKRPNYGIRIEGTEFNRRLCIANIIIGKESEALAEGEAEHQENMTRVARCVAEVI 223 Query: 158 PLAGIT------RDNLQHLSTACDNQHRWPLMQGDYLSSLIL---AIYALRNQLTDEWPQ 208 T ++ + H+ A + D + Y + ++T+ Q Sbjct: 224 DTENFTVNSVAYQNLIVHICIAVQRIQENCYVPLDEERQERIRRSKEYRIAQKITERLNQ 283 Query: 209 -----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIA 263 +P EI I H + E Q + + V +L V Sbjct: 284 SFAIRFPDQEIAYIAIHLAGKQSL-FLPEQERTGEAGGQVISEETWEVVSQMLDAVYEAF 342 Query: 264 SLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 + D +L N+ H++ + + + + ++KA +P A+ ++LH ++L E+ Sbjct: 343 LFDFRSDLELRMNLAQHIVPLAVRLQYNMKLKNPLLKDIKARFPMAYAIALHSSSILTER 402 Query: 323 LDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSDQNAIATINQLAIERDVLNC-- 375 L D + + L FA A+ER ++ +I+ + A + ++ + Sbjct: 403 YGHELKDDEVGYLALAFALAIERQNTELPKKNILIVCASGKGSAQLLHYRYRQEFGSYVG 462 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 R+ + ++I+ + + V VK + +A I+ +K L Sbjct: 463 RIETCDVSNVKKVDFKDIDYVFTTVPIQEKVPVPVQ---EVKYFLESADIQNMKKVLRRK 519 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 P + +S+++ ++ +++ +C Q++A +T + ++ RE Sbjct: 520 GGDDVPLMAYF-DEELFFSHLKFDNPHDVSKFLCHQVMAVKGLTDQFWKLVVKREKAART 578 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY-L 554 N +A+PH W L +P+ ++ + + + + L+ F + Sbjct: 579 AFGNLVAMPHPWKAISEETFVCVGILDEPIRWGDQDVQVIFLVSISNRKNKNLQAFYQGM 638 Query: 555 ASILCQ-HPAEIIAGLTGYEAFMELLHK 581 +L + YE ELL K Sbjct: 639 TKMLTDADAIGRLIRAQTYETLTELLEK 666 >UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 Length = 651 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 103/627 (16%), Positives = 214/627 (34%), Gaps = 73/627 (11%) Query: 17 PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQLEIFERRSFFQLLQK 75 P T +A V+ RT+ DI L + S +GY+L I + F LQ Sbjct: 19 PVTSSVIAANVKVTTRTVRNDIKELQTIVEKHGASIQSVRGSGYKLLIRNEQPFKNWLQD 78 Query: 76 -------------HDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE-R 121 D + +LL + + LA L + ++ + L +K+R Sbjct: 79 NFQQNSTVPIFPDERIDYLMKRMLLADGYLKLDDLAEELFISKSTLQSDLKEVKKRLRPY 138 Query: 122 TCCLASRPGLGHFIDETEEKRVILLANLLRKDPF-----LIPLAGIT-RDNLQHLSTACD 175 L +RP G + E + +A L D L AGI +D++ + TA Sbjct: 139 DIILETRPNYGFKLRGEELRLRYCMAEYLVDDREPEPDLLSEKAGILPKDDIHVIRTAIM 198 Query: 176 NQHRWPLMQGDY--LSSLILAIYALRNQLTDEWPQ------------------------- 208 Q R + + L++LI+ I ++ E Sbjct: 199 KQVRNHKIPLSFFGLNNLIIHIAIACKRIRTENYVSLIPEDLHDIKLETEYQSAEAIVKE 258 Query: 209 --------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVP 260 +P E I H LG + ++ + ++ + +++ + Sbjct: 259 LESALSVTFPEQETAYIAIHL---LGTKRMAQSQLEGKELTRLIDGETSRLTEAMIEAIE 315 Query: 261 GIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 L I D +L + H+ + + R ++ +K +P AF+ + ++ Sbjct: 316 RELKLGITDDNELKAGLALHIKPAINRNRYGMNLRNPMLSAIKENYPLAFEAGVIAGIVI 375 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQNE---RQPIILLSDQNAIATINQLAIERDVLN 374 +EQ I + +++ + L+F A+ER + E ++ +I+ + A + + + Sbjct: 376 KEQTGIDIHENEIGYLALHFGAAIERRKTERPPKRCLIVCASGAGSAQLLREKLRSRF-A 434 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 R+ I + + E + + ++ + D + V ++ +I L Sbjct: 435 KRLEIVGTADYCSLDQLSFESIDFVVSTVPIKKDLPVPVLKVHTLLGGGDFTKIDAMLEE 494 Query: 435 AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE 494 + + E+ + + R + Q+ + I RE Sbjct: 495 KREQ-----LNFLKPELVFLQQDLETKEDVIRFLGQQVAEAGLASDSLTDSIFEREAISP 549 Query: 495 NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYL 554 N AIPH Q TL +P++ ++ + V + C +++ +L+ Sbjct: 550 TSFGNLTAIPHPLVPQTDTTFWAVCTLKKPIDWADKRVQFVCLLCVEKESKADLQHMYKW 609 Query: 555 ASILCQHP--AEIIAGLTGYEAFMELL 579 + P + T Y+ + + Sbjct: 610 LGGMLDDPAAVSRLLKCTTYQEVLRVF 636 >UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY31_9BACL Length = 650 Score = 321 bits (822), Expect = 6e-86, Method: Composition-based stats. Identities = 105/652 (16%), Positives = 211/652 (32%), Gaps = 76/652 (11%) Query: 2 LNERQLKIVDLLEQQ---PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 +N+RQ I+ +L ++A G S +TI D+D ++ L + G Sbjct: 1 MNDRQKDILHMLLTDARPHLVIRDIALHFGCSEKTIRNDLDEIDQYLTQSSNARLVRKPG 60 Query: 59 YQLEIF----ERRSFFQLL---------QKHDNDDRLL----ALLLLNTFTPRAQLASAL 101 Y + + ++ L ++ ++RL+ LL+ +LA Sbjct: 61 YGVALDISEPDKAQITAELLRSRSIKPKEQETEEERLIAVAYRLLMETKPVTIQELADKH 120 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 +T + + L L+ + + S+ +G I+ E + L+ L + Sbjct: 121 YTSKTVIKKDLDALRDWLAKWDLIVVSKQKVGVLIEGKERDKRAALSKLSQLTGEAGQAF 180 Query: 161 GITRDNLQHLSTACDNQHRWPLM----QGDYLSSLILAIYALRNQLTDEW---------- 206 R L + L D +L L + T Sbjct: 181 IKDRFAPHELDIVTRELKQLELDAQLAFTDEAFDNLLIHTLLMIRRTKLKQPITFSEQEK 240 Query: 207 ------------------------PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ 242 ++P DE+ + H + R T Sbjct: 241 VFVRGKPEFRWTGAFIRKLERFFAVRFPEDEVAYLTAHILGGKIRSRARIETAEPGADPS 300 Query: 243 QAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 + L++++ + ++ D L+E + HL L + + ++ Sbjct: 301 AETAEVRGLAETLVRKMSALTWMDFGQDEALMEGLRIHLYSTLNRLSYGLTVSNPMLQDI 360 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH----QNERQPIILLS 355 K +P FDM ++ L E + + + + L+F A+ER + ++ + + Sbjct: 361 KRMYPYMFDMVIYATRELSEGYPFTIPEEEVAYLTLHFQAAVERLSQPAEGRKRIVTVCH 420 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 ++ I + +ER V+ + ++L II+ L++ YIT Sbjct: 421 MGVGMSQILRSKLERKFPELHVLDSVRKADLPGYLAHHSVDFIISTI--PLENVNVPYIT 478 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERF------FSAPGSFHYSNVRGESWQHITRQIC 469 V ++ ++I F+ S + + + + Sbjct: 479 VSPLLETGETQKIADFIGRLDQESGHAEHAGSILGMYTQPSLIFPRLTIGHRFELIELLG 538 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 +L Q + D A + + RE I +AIPH + R R TL +P+E Sbjct: 539 NELAKQGFVEPDYAHQALLRERLSSTTIGGGIAIPHGDPKLIRTSRIAVATLEEPLEWQE 598 Query: 530 EVINHVLIACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFMELL 579 E ++ V + A + K S+L + P E + E + L Sbjct: 599 EKVSVVFMLALAPQEQEMTKKLFQRLSLLSEQPSTVERLVQARTPEELLNCL 650 >UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan operon n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKS9_BACSK Length = 649 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 109/645 (16%), Positives = 222/645 (34%), Gaps = 77/645 (11%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNG-KARIFASGSA 57 ++N+R I+ L Q T LA V+ RT+ D+ L L A I + Sbjct: 10 IMNQRLQSILRELLGTQGYVTSRYLASVNQVTPRTVREDVKQLQTELANIHAGIESVPGK 69 Query: 58 GYQLEIFERRSFFQLLQ-------------KHDNDDRLLALLLLNTFTPRAQLASALNLP 104 GY+L I + F Q LQ + + LLL + LA L + Sbjct: 70 GYKLTIEDEAQFRQFLQRETTGNHGAPISPEERVTWLIQKLLLAEEYIKLDDLADDLFIS 129 Query: 105 ETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLR------------ 151 ++ + L K +A+RP G ++ E KR +A + Sbjct: 130 KSSLQNDLKNAKLILARYGLQVATRPNYGLYLKGDELKRRFCMAEYVFERKNVAADLTSL 189 Query: 152 ------KDPFLIPLAGI----------------TRDNLQHLSTACDNQ---HRWPLMQGD 186 K+ L + I + H+ A H L + D Sbjct: 190 QLTAFMKEEQLADIWDILVTTMQENGVTLSDIAINNLFIHIVIAFKRIEAGHHISLYRKD 249 Query: 187 YLSSLILAIYALRNQLTDEW-----PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH 241 Y + ++ +P EI I H ++ Sbjct: 250 MSDICSQHEYYVAQKMIARLNTHLGVSFPEMEIAYIAIHLLGTRLVAENEQANDNLK--- 306 Query: 242 QQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 + + ++++V LNI D +L+ ++ HL + + R + + Sbjct: 307 KVFDDEYYKLAKAIVEKVERELDLNIANDQELLVSLMLHLKPAINRYRYGMNIRNPMLAD 366 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER---QPIILLS 355 +K + AF+ ++ +++++L I + +++ + L+ ALER ++ + +I+ + Sbjct: 367 IKQHYTLAFEAAVIGQAVIKDKLGISIDENEIGYLALHIGAALERRNQQKEPKRILIVCA 426 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 A + + +E + R+ I + + ++ + +I S + + Sbjct: 427 SGRGSAQLLKYKLEANFKK-RLFIVDTTEYYQIDQADLTNIDLIVTSIPIKKKMPVPVVE 485 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 V I+ +E+ +R + +S + + R + QL + Sbjct: 486 VNTILGTEDLER-----IEIQLRHGDSLLSYTEAGLVFLQQSLKSKEDVLRFLDKQLRER 540 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 ++ + ++ RE N +AIPH + Q + F+TL +PV N + + V Sbjct: 541 GVVSKGFYEALVKRENLASTAYGNLVAIPHPITPQTEKTFLAFVTLKEPVSWNGKPVQLV 600 Query: 536 LIACAAADARHEL-KIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 + C + +L ++++ L +L E L Sbjct: 601 CLLCVKQGSTEDLERVYNQLLYVLDHRDIVQ--ECIKAEEATRFL 643 >UniRef50_C6CCS2 PTS modulated transcriptional regulator, MtlR family n=79 Tax=Enterobacteriaceae RepID=C6CCS2_DICDC Length = 641 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 94/633 (14%), Positives = 208/633 (32%), Gaps = 61/633 (9%) Query: 3 NERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQL 61 N R ++ DLL+ +P ELA++ VS RT+ DI +N L S GYQL Sbjct: 5 NPRLAQLFDLLKNEPLPQDELARRLAVSTRTVRTDISQINELLAEHGAHLVLSRGVGYQL 64 Query: 62 EIFERRSFFQL--------------LQKHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 +I + + + L+ L +A + Sbjct: 65 QIQDAQRYACWEATQTAAMPTRVPRTSTERVQSLLVRFLTSAFAFKLEDVAERWFVSRPT 124 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFL-------IPL 159 + + +++ R + +RP G + +E L +L+ + +P Sbjct: 125 LQSDMAEVREVLGRYHLSIETRPRYGMKLLGSEVSIRTCLTDLVYQMVQDDGGEAPTLPS 184 Query: 160 AGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIY--ALRNQLTD-----EWPQYPGD 212 + R+ L L + ++ + L +Y ++ + ++ D Sbjct: 185 TALDRETLSRLQVILHDVFSRSGIRMTDEAECYLGLYCAVAIRRIGEGYPLSDFTAEDVD 244 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN------------------VQG 254 + + H + + E+ + + + + V Sbjct: 245 DDVREAAHQLISVMRAMTGKAISASEEAYLRVNLAARRIQELSGNASAISPDDGESLVDY 304 Query: 255 LLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 +L + + N+ D QL ++ H+ + + + N+K +P A+D++L Sbjct: 305 ILSYINTHYNFNLQNDPQLRADLLTHIKTMITRVRYQITIPNPLLTNIKQHYPMAYDVTL 364 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALERH-----QNERQPIILLSDQNAIATINQL 366 ++ + + +++ + L+ LERH Q Q +++ N+ + Q Sbjct: 365 AAVSSWSKYTPYVISENEVGFLVLHIGVGLERHYDVGYQRHPQVLLVCDTGNSTIRMIQA 424 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 + R V SL + + E E +I V + + T +E Sbjct: 425 MLWRRYPQMVVNNIISLRDYRTLPEVEEDFVISTTRLAEKGKPV---LVMSPFPTDYQLE 481 Query: 427 QIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 Q+ + R F F + + R +C QL + + D + Sbjct: 482 QLGKLVLVDRTRPYMLEKFFDRQHFCIIDQPM-DQATLFRTLCGQLEREGRVDGDFHASV 540 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA-R 545 + RE ++ +A+PH R F + Q + +E + + + Sbjct: 541 VEREAIVSTMLGEGIALPHSLGLMARETVVFTVLAPQGIPWGDETAYAIFLLAISKSEYE 600 Query: 546 HELKIFSYLASILCQHPAEIIAGLTGYEAFMEL 578 + I+ + + + + +++F + Sbjct: 601 EAMAIYDLFVTFMRERAMARLRECPDFDSFKAV 633 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 76 HDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRY-ERTCCLASRPGLGHF 134 + L LL N P+ +LA L + V + ++ + E L G+G+ Sbjct: 4 SNPRLAQLFDLLKNEPLPQDELARRLAVSTRTVRTDISQINELLAEHGAHLVLSRGVGYQ 63 Query: 135 IDETEEKRV 143 + + +R Sbjct: 64 LQIQDAQRY 72 >UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK9_BACCO Length = 620 Score = 314 bits (804), Expect = 7e-84, Method: Composition-based stats. Identities = 100/626 (15%), Positives = 229/626 (36%), Gaps = 50/626 (7%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSA 57 M++ RQ +I+ LL++ P + ++ G+S RT+ +I + + Sbjct: 1 MVSNRQKQILWLLQKSAGPLNAKAIGERLGISDRTVREEIRQIQQKSDALGVKLKVLRGK 60 Query: 58 GYQLEIFERRSFFQLL-------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 GY LE + R QL Q+ L LLL + L + L + ++ + Sbjct: 61 GYLLEKVDYRRLLQLEENGLFAEQEERVKYILKRLLLEKDYVRLEDLEADLYVSKSTLHT 120 Query: 111 RLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDP-----FLIPLAGITR 164 L ++++ ++ LA+RP G ++ E K+ + LA+ + P Sbjct: 121 DLKKVRKILKKYDLTLANRPHYGTKVEGGEFKKRLCLADSIFGWQNKPGQQNTPFNQDLF 180 Query: 165 DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYP-------------- 210 ++ + +++R L +L I ++ D + P Sbjct: 181 QKVKQILIRIISKYRIR-FSDIELQNLATHITLACKRIEDGFTIEPLPFHFKESYTFERK 239 Query: 211 --GDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH-------QQAQVISADNVQGLLQRVPG 261 + ++ + G+ + + + +Q D V +L + Sbjct: 240 VAKEITGEVEKSVGIPFPPAEIDYILVHLLGTKLISKHVARQVSDEIDDIVNAILHELKT 299 Query: 262 IASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 + D + +T HL L + R +N +K +P AF+ ++ + Sbjct: 300 QFRWDFSNDKEFRNGLTLHLHTSLNRMKYKMHIRNPLLNEMKTKFPIAFEGAVAAGECIE 359 Query: 321 EQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVI 378 + + + + + ++ A ALER + +++ +++ + A I +E N + Sbjct: 360 AVIHKKVNEDEISYLAIHIAIALERMRKKKRVLVVCATGLGSAKILSYQLENRFAN-EME 418 Query: 379 IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIR 438 I ++S ++ + +I ++ + D + V + + + R Sbjct: 419 IVDTISYYTLSDYDLSRVDLIVSTIMIPDHLEVPVVVVSHFLEENDAIH----IQREIGR 474 Query: 439 QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV 498 + S + + +S + + + +C +LV QH + + A ++ RE Sbjct: 475 LKGNVQKYMAPSKIFIHQELDSKEKVIQFLCKKLVEQHAVPENYATLVLKREAIASTAFG 534 Query: 499 NRLAIPHCWSEQERRFRGFFITLAQPVEVN-NEVINHVLIACAAADARHELKIFSYLASI 557 N +A+PH R TLA+P++ + ++ + V + + + ++ YL I Sbjct: 535 NLVAVPHPLEPVTHRTFWTICTLARPIQWDEDKKVQLVCLLNVGKEGGNLNAMYKYLTGI 594 Query: 558 LCQH-PAEIIAGLTGYEAFMELLHKG 582 + + I E ++ + G Sbjct: 595 VQNKAAVQKIIKSNTVEELIQCMEAG 620 >UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9P7_9ACTN Length = 648 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 100/639 (15%), Positives = 221/639 (34%), Gaps = 76/639 (11%) Query: 10 VDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSF 69 + ++E + P ELA+ GVS RT+ + +N +L G A I + GY + + + ++ Sbjct: 10 LHIMEHEGIKPAELAEAFGVSVRTVRNHVQAVNRSLEGVASIDLARGRGYTVSVADEQTL 69 Query: 70 FQLLQKHDNDDR--------------LLALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 + ++ R L LL + + LAS L + T ++ L ++ Sbjct: 70 DAIFEQARKQRRASLPQTAEARVSYLLNDLLSRSDYIAIDTLASVLYVSRTSISNDLKQV 129 Query: 116 KQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT----------- 163 ++R + + R G + +E + + LA+L + + A Sbjct: 130 EERLAQFGLAIDRRSHHGIKVIGSEMAKRLCLASLAMEGSDELKGAARLSVDAEAYRALF 189 Query: 164 -----------------------RDNLQHLSTACDNQHR--WPLMQGDYLSSLIL-AIYA 197 R+ + H+ A + M+G+ L+ + + Sbjct: 190 DVVSDCVDDVTTEERFAINSVAYRNLITHIVIALLRIREGCYVPMEGEQLTEIRKSPSFP 249 Query: 198 LRNQLTDEW-----PQYPGDEIKQIVEHS-GLFLGDNAVRTLTGLIEKQHQQAQVISADN 251 + +++D P +E+ I H G L + G ++ D Sbjct: 250 IARRISDSIGARTGVVLPDEEVAYIAIHLTGKRLLGDF---DAGDDQEAGLVISDEVWDA 306 Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 V G+L V ++ D +L N+ HL+ + ++K+ +P A+ Sbjct: 307 VTGMLDAVWRTFRFDLRHDLELRMNLARHLVPLEVRLHHHLHLDNPILGDIKSRFPLAYS 366 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSDQNAIATINQ 365 M++ + L + L + + I L FA ALER + +++ +++ + A + + Sbjct: 367 MAVEAGSSLAAHYEAELSEEEIGYIALSFALALERQKTDAPKKRILVVCASGAGSARLLE 426 Query: 366 LAIERDVLN--CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 ++ + + + I+ + + V V + AA Sbjct: 427 HRYRQEFGSYVEHIETCDAAHVRFVDFSRIDYVFTTVPLAEEVPVPVRQ---VGYFLDAA 483 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEA 483 + ++ L + R F + + + + + + ++ D Sbjct: 484 EVSDVREILLSDSRRSDARPLF--CEELFLPHASCSTPEEAIELLVGEASRVYDLSPDFL 541 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD 543 + RE NR+A+PH + + +P+ + V + A D Sbjct: 542 DLVYRREQAAPTAFGNRVAMPHPLEAASTQSFVALALIDEPIIWGGREVQAVFLVSIARD 601 Query: 544 ARHELKIFSYLAS--ILCQHPAEIIAGLTGYEAFMELLH 580 A + F S +L + + + ++ +EL+ Sbjct: 602 ATDVSEGFFSAMSELVLSEAFIDRLLSERSWQTLIELVD 640 Score = 65.1 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 25/277 (9%), Positives = 78/277 (28%), Gaps = 25/277 (9%) Query: 81 RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEE 140 R ++ + A+LA A + V + + + E + G G+ + +E Sbjct: 7 RFALHIMEHEGIKPAELAEAFGVSVRTVRNHVQAVNRSLEGVASIDLARGRGYTVSVADE 66 Query: 141 KRVILLANLLRK----------DPFLIPLAGITRDNLQHLST-----ACDNQHRWPLMQG 185 + + + RK + + L +++ Sbjct: 67 QTLDAIFEQARKQRRASLPQTAEARVSYLLNDLLSRSDYIAIDTLASVLYVSRTSISNDL 126 Query: 186 DYLSSLILAIYALRNQLTDEWPQYPGDEIKQ-IVEHSGLFLGDNAVRTLTGLIEKQHQQA 244 + + ++ + + G E+ + + S G + ++ L Sbjct: 127 KQVEERLAQFGLAIDRRSHHGIKVIGSEMAKRLCLASLAMEGSDELKGAARLSVDAEAYR 186 Query: 245 QVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWI--AEHRQSSMNNLK 302 + + ++ ++ N+ H++ L + ++ Sbjct: 187 ALFDVVSDCVDDVTTEERFAI---NSVAYRNLITHIVIALLRIREGCYVPMEGEQLTEIR 243 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYF 337 +F ++ + + + L D + I ++ Sbjct: 244 K--SPSFPIARRISDSIGARTGVVLPDEEVAYIAIHL 278 >UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) porter component IIA/transcriptional antiterminator n=2 Tax=Bacillus pumilus RepID=A8F9J6_BACP2 Length = 639 Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats. Identities = 99/641 (15%), Positives = 208/641 (32%), Gaps = 63/641 (9%) Query: 1 MLNE--RQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-G 55 M+ R +++ L + EL +S R+I I N L + Sbjct: 2 MMTADPRTYQLIQRLFETKGFVKLEELTASFRLSDRSIRHLIKEANEQLKEAGAKIKTIR 61 Query: 56 SAGYQLEIFERRSFFQLLQK--------------HDNDDRLLALLLLNTFTPRAQLASAL 101 GY L ++ +F L + + LLL + QLA L Sbjct: 62 GKGYTLLTSDQDAFLLWLHQQKLPARSLVPVMPEERVRFIMRKLLLQQDYLKIDQLAEEL 121 Query: 102 NLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRV-ILLANLLRKDPFLIPL 159 + V+ L + ++ L S+PG G I+ E ++ LL ++P L + Sbjct: 122 FISRMTVSSDLKKGRELLARYGMALVSKPGFGLKIEGDELQKRTCYADLLLEEEPALSHI 181 Query: 160 AGITRDNLQHLS------TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE 213 + + +S N H+ L+ D ++ A+ Q T + + P Sbjct: 182 TEREQLHFPDISLETIRSIVLTNLHQESLLIKDIALKNLVIHLAIAIQQTRKNQRIPAST 241 Query: 214 ----------------IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQ-------VISAD 250 I Q+ + + L ++ L + + V Sbjct: 242 TRTQRSPVLVRIAQKIIHQVSDTFHVTLSEDETDYLVMHLLANQTWKEAAQHQTTVEVQQ 301 Query: 251 NVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 V LQ + ++ D L +++ H+ L + + ++ +K ++P F Sbjct: 302 AVAVFLQHIEKMSGHRFADDNILQQDLMLHMKPLLNRIQYGVSLQNPLLHEIKTSYPYPF 361 Query: 310 DMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQ----NERQPIILLSDQNAIATINQ 365 D+++ + L+ ++ + L+ A + ER Q +++ II+ A + + Sbjct: 362 DLAVSGLNALQLVRTPNEDEAAYVALHIAASFERSQLDTSQKKKAIIVCGSGLGTARLLE 421 Query: 366 LAIERDV-LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 + ++ ++ S + + ++I V I V Sbjct: 422 IKLKTAFQHELDIVELYSYQDYLMSTTLPCDVIITTVPLASKGKPV---IQVSAFFEQHD 478 Query: 425 IEQIKHFLA--TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADE 482 ++Q+ + E N + +C++L H +++ Sbjct: 479 VQQVNEVIHLLNGHGTPSQELMAFFQERLTILNADLSGKDEVLDALCSRLETYHLVSSSF 538 Query: 483 AQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAA 542 ++ RE + +A+PH E L QP++ ++ V + Sbjct: 539 RSSVLEREQMSSTYLGKGIAMPHPLITNEGTSCVAIAHLKQPIDWQGNQVSLVFLLAIHK 598 Query: 543 DARHELKIFSYLASILCQHPAEI--IAGLTGYEAFMELLHK 581 D + F A L +P I + ++ M L + Sbjct: 599 DDAAYMNQFFEQAVDLLDNPNRIHSLNQSKTFDELMNALFQ 639 >UniRef50_B9Y3S8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3S8_9FIRM Length = 631 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 117/629 (18%), Positives = 225/629 (35%), Gaps = 51/629 (8%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 MLNE+ +++ LL+ P T G LAQQ +S RT R I L L S G Sbjct: 1 MLNEKMFQLIQLLKRGHSPLTSGMLAQQLKLSARTCKRYIAELIPLLEQHGARILSDKTG 60 Query: 59 YQLEIFERRSFFQLLQKHDNDDR-----------LLALLLLNTFTPRAQLASALNLPETW 107 Y+LEI + F LQ+ +L LL+N ++++ L + + Sbjct: 61 YRLEIIDAARFEAFLQEKTKVFEFSENNGELQFGILKSLLVNPTISQSEMIDQLFISRST 120 Query: 108 VAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRV-------ILLANLLRKDPFLIPL 159 + + + +K+ E LA+RP G++I E + A+ L +P L+ Sbjct: 121 LNKLMVEVKKTLKENGILLANRPYYGYYIVGDEVDIRNFMVKTLFVTASFLSAEPELLAR 180 Query: 160 AGITRDN-LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYP---GDEIK 215 + + + P + L + R Q + + ++ Sbjct: 181 MPFALSRSVSQICQILKAEGIPPEEDLVHYCLKYLMVSLCRIQGGAQLRLSLPSLSETLQ 240 Query: 216 QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI-----------------SADNVQGLLQR 258 V+ + + D L E++ A +I + V +L Sbjct: 241 PAVQRAASAILDLFCGPLVINDEERLYFASIIGNRTPLPPDEALASADWLRELVDDMLNN 300 Query: 259 VPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 + + ++ DA+L + + HL + A M +K+ + A++ SL Sbjct: 301 ILNLCKVDFRSDAKLRKALMTHLYASFSRYYLKATLPNPLMTLIKSQYVEAYNYSLIGCE 360 Query: 318 LLREQLDIPLFDS--DLIGLYFACALERHQNER--QPIILLSDQNAIATINQLAIERDVL 373 +L+E+ + + D I L+FA ALE+ + + +I+ + + +L + R + Sbjct: 361 MLKEKHHLAINDDDIGYIALHFAAALEKDRAAMLCRTVIVCGSGIGTSELIRLRLSRKIP 420 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLA 433 + + EL I+ II + I + ++T+ I +I+ + Sbjct: 421 QLVIQDVLASYEL-PDFSAIDVDFIITTVPLPAGNNPLPSILISPMVTSEDIHKIEFMIH 479 Query: 434 TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 Q F + V G++ + A +V I+ A I RE Sbjct: 480 NYSSLQYLRSLFR--EELFFPAVEGKTKAEALDSLTASMVETGLISEAFATAIKEREAMS 537 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY 553 I +AIPHC+ L +PV + + I + +F Sbjct: 538 STEITETVAIPHCFLSVPIDTMLAVGILKEPVMWGRSRVQLLFIGIINPAVKKNKCVFPM 597 Query: 554 LASILCQ-HPAEIIAGLTGYEAFMELLHK 581 + ++ + + T + F+ +L + Sbjct: 598 IYRLIQDPEKVQRLTRQTEADTFLRILFE 626 >UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TNE9_LACRL Length = 644 Score = 290 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 112/640 (17%), Positives = 205/640 (32%), Gaps = 60/640 (9%) Query: 2 LNERQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 LN RQ KIV LL T ELA Q GVS +T+ D+ + L Sbjct: 4 LNARQQKIVRLLLSTSNTTAAELATQVGVSRKTVYSDLREIVLALRDDQVTITVTPRKGI 63 Query: 61 LEIFERRSFFQLLQK-------------HDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 + +L+K L LL + QLA L + Sbjct: 64 TVTAKDADIQNILRKLKSEKTKLPDSDRSRERYILSELLRSQDYISIDQLAEVLFISRRV 123 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKD------------- 153 + L L ++ L PG G I+ E K+ +L +L + Sbjct: 124 IQRNLDNLNRQLIGTDTELLRIPGRGVRIEGEEGKKRKVLFKMLSQYWDSDWRMDQSSEG 183 Query: 154 ----PFLIPLAGITRDNLQHLSTACDN--QHRWPLMQGDYLSSLILAIYALRNQLTDEWP 207 P + I + L+ N + + + SL++ + N++ P Sbjct: 184 WTADPAIAENPNIDSSVVNILARVVQNASEKLGLSLSEYAIQSLVIHLAIAINRIKAGNP 243 Query: 208 QYPGDEIKQ----------------IVEHSGLFLGDNAVRTL-TGLIEKQHQQAQVISAD 250 D++ + + + + L D + + LI Q + + Sbjct: 244 IGQNDDLIRNIGNERKSEAVQLAAMVEKEVNVRLPDEEIAYIQIHLIAASANQVSLANQH 303 Query: 251 NVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 ++ + +R+ + D L+ +T H+ + A ++K +P AFD Sbjct: 304 SMIPIPERLKELLHPFGYDRDLLFGLTVHMQAAVKRLRVNAGISNPYTEDIKRNYPQAFD 363 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQ 365 +L I + D + + L+ LER + Q + I+ S A + Sbjct: 364 EALIVSDDYERTEHISMNDDEVAYVALHIEAYLERRRAIHQRVNAAIVCSTGLGSAQLLA 423 Query: 366 LAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI 425 I R+ + ++ SL + L+I D V + A + Sbjct: 424 ARIRREFSDISIVKIWSLQDFQRNSLVGIDLIISTLRLPKGDIPTVTVSPVMSDSDALLV 483 Query: 426 EQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR 485 + + + E F G + SW+ + + + +L Q + Sbjct: 484 RNLVRNIEDKKNNKHAEFFRIIHGDLMWLASNARSWKEVIQNLGDRLEQQGYADEGLTAS 543 Query: 486 IIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA--AAD 543 + RE N AIPH E + TL P+ + ++ V + Sbjct: 544 ALERENLSFTSFDNY-AIPHAQPELVQAPAIAICTLEHPINWGHHKVSVVFFLAMTKKMN 602 Query: 544 ARHELKIFSYLASILCQ-HPAEIIAGLTGYEAFMELLHKG 582 + IF L I+ + + T + +E+L +G Sbjct: 603 QQQIDSIFDDLYDIVADTNLLNALTKATDKKELIEILKRG 642 >UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D9V5_GEOSW Length = 661 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 102/652 (15%), Positives = 214/652 (32%), Gaps = 74/652 (11%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNG---KARIFASGS 56 + R +++ L + LA + S +T+ D+ L+ L+ I S Sbjct: 1 MLSRHKQLLKQLLTAHTYTSVSALANKLVCSEKTVRNDLKALDEFLSQKYPNVVIERKPS 60 Query: 57 AGYQLEIFERRSFFQLL-----------QKHDNDDRLLALLLLNTFTPRAQLASALNLPE 105 G + + L Q++ + LL + QLA + + Sbjct: 61 VGVIIRGSDEEKQQLLRDLSRMEETNPPQEYRKLQLIKILLTEDKPVTMQQLAEQFYVSK 120 Query: 106 TWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLL------RKDPFLIP 158 + + L ++ + L +P LG ++ +E+ L+ L+ Sbjct: 121 SVIQYDLEEIEHWLQSFGLVLIRKPHLGIKVEGSEKAWRTALSRLIELFVDHSYYILDSK 180 Query: 159 LAGITRDNLQ--------------------------------HLSTACDNQHRWPLMQGD 186 + D L+ H++ A + + D Sbjct: 181 QLKLIEDVLKPYELTLIEKEIRKMDEWLEFPLTDQSVISLTIHIAIAIKRIKKGHRIHID 240 Query: 187 --YLSSLI-LAIYALRNQLTDEWPQ-----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIE 238 L L Y L QL + Q P EI I H IE Sbjct: 241 TNQLQELQKKPEYKLAEQLAKQIEQWVAVKIPKAEIGYITLHLLGARLRYDQVHEKEDIE 300 Query: 239 KQHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSS 297 + + + V+ L+ + + D +L+ +T H L + Sbjct: 301 QLLTKMDYEALQIVKELIHDISLCTDERLRKDKELLLGLTIHFHSTLNRLRNGLAVKNPL 360 Query: 298 MNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER---QPII 352 + ++K + +F+M L I + ++ ++ + + + I L+ ALER QN+ + II Sbjct: 361 LKDIKQMYRYSFEMVLSLIPKIEKKANVAIPEDEIAYIVLHIQAALERMQNKNEKIRTII 420 Query: 353 LLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNN 412 + + + + + + + +I S+++L +P L+I+ L+ Sbjct: 421 VCATGSGTSRLIEAKLSTTFPKLEIIAVTSMAKLHETIATTQPDLLISTV--PLEHPKIP 478 Query: 413 YITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS-FHYSNVRGESWQHITRQICAQ 471 ITV ++ ++ ++ ++ E + +V I + Sbjct: 479 VITVSPLLPKKELDILEQWIERISQPYHYEMLRQLMNPACIFLDVPVTDRFEAIDYIANE 538 Query: 472 LVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV 531 L + ++ Q RE I +AIPH + + L+ P++ E Sbjct: 539 LYQRGYVQKPYGQSAKEREALSSTYIGGGIAIPHGQMQWINQSIIAVARLSSPIDWGGEQ 598 Query: 532 INHVLIACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFMELLHK 581 + V + D ++K ++L + + ++ + F ELL K Sbjct: 599 VTFVFMIAHRLDNNEQIKKLFQEIALLSEDEPTLKQLSICKTADEFYELLKK 650 >UniRef50_Q5E1U1 PTS system, mannitol (Cryptic)-specific IIA component n=2 Tax=Vibrio fischeri RepID=Q5E1U1_VIBF1 Length = 640 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 93/623 (14%), Positives = 198/623 (31%), Gaps = 57/623 (9%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQLEI 63 R I + L + ELAQ+ +S RTI DI LN L GY +I Sbjct: 8 RLNVIFEALRYEALPQQELAQRCDISTRTIRTDISALNDILASYGAQIQHQRGKGYHFDI 67 Query: 64 FERRSFFQLLQK------------HDNDDRLLALLLLNTFTPRAQLASALNLPETWVAER 111 ++ F + ++ ++ LL LA+ + T + Sbjct: 68 YDETRFLDIEKQTKKMKSSPRNAKDRMVYLMMRLLSQEEECKLDDLANQWFVSRTSLQAD 127 Query: 112 LPRLKQRYE-RTCCLASRPGLGHFIDETEEKRV-ILLANLLRKDPFLIPLAGITRDNLQH 169 + ++++ E L S+ G + E+ + L + P + Sbjct: 128 MGEIREQLEQYNLELISKAHCGLRLFGEEQAIRACIAHILFQFKPSDHTFIDVCEYFFPE 187 Query: 170 LST------ACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQY------PGDEIKQ- 216 ++ + ++ + D ++ + + E Q Sbjct: 188 INQPSLKTDLLELINKNHIKLTDEGLHHLVVYCGVALHRLKQNACIHHVDQPNLSEEAQK 247 Query: 217 --------IVEHSGLFLGDNAVRTLTGLI--------EKQHQQAQVISADNVQGLLQRVP 260 I G L + L+ I + Q + Q LL V Sbjct: 248 TAAELSQTIESLLGAPLPQAEIDYLSIQIAARRVTGVPEIDTQKPTEQLELTQYLLDYVN 307 Query: 261 GIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 + ++ D QL ++ H+ + + +++K +P A+DM++ I+ Sbjct: 308 THYNYDLRNDEQLKRDLLCHITTMILRVKYQITIPNPLFDHIKRYYPLAYDMTVAAISHW 367 Query: 320 REQLDIPLFDSDLIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIERDVLN 374 + L IP + + ++ LER+ Q + +++ +I + + + R + Sbjct: 368 GKHL-IPDGEIGYLVMHIGVGLERNFSLEEQLPPKALLVCDSGTSIVRLLESQLIRSLPQ 426 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 + SL + + + +I + ITV I T+ +EQ+ + Sbjct: 427 LTIEKVESLRDYEELSKVDADFVISTEKVSQKNKPT---ITVSPIPTSFQLEQVNKLILM 483 Query: 435 AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE 494 F F + + + ++ A + + +I RE Sbjct: 484 NRSHPYMLDKFFDHRYFSVLDEPM-TQGEVLKKFSAHFTEDNITPIEFYDSVIERESITS 542 Query: 495 NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI-NHVLIACAAADA-RHELKIFS 552 ++ +AIPH + + I V+ N I + + + D + ++ Sbjct: 543 TILGEGIAIPHSLGLLANETKVYTIISPHGVDWGNGKIAHVIFLFAINKDDYEEAMSLYD 602 Query: 553 YLASILCQHPAEIIAGLTGYEAF 575 + + + I G Y+ F Sbjct: 603 LFVTFMNGKAVDTILGCHSYDEF 625 >UniRef50_A0AFK2 Complete genome n=18 Tax=Listeria RepID=A0AFK2_LISW6 Length = 644 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 107/620 (17%), Positives = 221/620 (35%), Gaps = 61/620 (9%) Query: 16 QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAGYQLEIFERRSFFQLLQ 74 + +L+Q+ +S RTI DI L L I + AGY++EI + +F Sbjct: 21 SHLSAQKLSQELHISERTIRTDIAKLTEFLENHGATITLTRGAGYKIEILDPAAFQAFQN 80 Query: 75 KHDN----------------DDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQR 118 + + + LL + LA + ++ + ++++ Sbjct: 81 EKNKPKNADYFDLDNPEERVKYEIFLLLSSADYIKLEDLADTIYASRATISNDMKQVRKV 140 Query: 119 YE-RTCCLASRPGLGHFIDETEEKRVILLANLL------RKDPFLIPLAGITRDNLQHLS 171 L S+PG G I EEK L L+ +D LQ L Sbjct: 141 IASYDLTLVSKPGSGVKIVGEEEKMRYTLTALIASKKAPESYLETFFEWHKQKDKLQKLM 200 Query: 172 TACDN--QHRWPLMQGDYLSSLILAIYALRNQLTD-------EWPQYPGDEI------KQ 216 +A + + L +L+L + L ++ E +EI Sbjct: 201 SAVTDYFFATNIRFTDEALQNLLLHMMILVERIELGHSLEQFELTDVSEEEIVIANKLAT 260 Query: 217 IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN--------VQGLLQRVPGIASLNII 268 I+E +A + L + V + ++G+L R+ S ++ Sbjct: 261 ILESLFEITISSADKNYLLLQIASKRILNVEDKEISEFDDYAYIEGMLNRIESHYSYHLQ 320 Query: 269 DA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL--DI 325 D QL +++ H+ L + + ++K +P A++++L + L++ DI Sbjct: 321 DDLQLKKDLIAHIHSMLYRVKYHMTVKNPMTEHIKRYYPLAYEITLDAVESLKKDYPYDI 380 Query: 326 PLFDSDLIGLYFACALERHQN-----ERQPIILLSDQNAIATINQLAIERDVLNCRVIIA 380 + + L+ +LER+ + +I+ A I + ++ V N + Sbjct: 381 NQNELAYLALHIGASLERNYQISYYRHKSALIVCGSGFGTARIVEAKVKSAVSNLDITKV 440 Query: 381 RSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ 440 S+ E E +++ + V I + NI T ++ + + + Sbjct: 441 VSIQEYNRFIHIEEDIILSTVRIPEKNKPV---IKISNIPTNEELKMLGAIIQEQTDSNR 497 Query: 441 PERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNR 500 F ++ S I +++ + L + D ++ RE G ++ Sbjct: 498 GFLSNFFTAEF-FARSELTSKSAILKEMVSSLYKNDIVGTDFLGSVLEREKLGSTVLGTG 556 Query: 501 LAIPHCWSEQERRFRGFFITLAQPVEVNNEV-INHVLIACAAA-DARHELKIFSYLASIL 558 +AIPH + + L +P++ + + ++ V + C + D + I+ L ++ Sbjct: 557 IAIPHPLGLMAKETKIVIRILDKPIKWDQKQSVHAVFLLCISKHDYEEAINIYELLVELV 616 Query: 559 CQHPAEIIAGLTGYEAFMEL 578 + E +A LT + F L Sbjct: 617 REEYGEKLANLTNFREFTTL 636 >UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFG3_9BACI Length = 645 Score = 285 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 106/642 (16%), Positives = 219/642 (34%), Gaps = 65/642 (10%) Query: 2 LNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKA--RIFASGS 56 + RQ +++ +L E+ +L+ Q G +T+ D+D + L + Sbjct: 6 MTNRQKELLRILLLHEEGALQIKDLSGQLGCVEKTVRNDLDRIEDYLGQYEGTNLIRKPG 65 Query: 57 AGYQLEIFERRSFFQLL-----QKHDNDDRLL----ALLLLNTFTPRAQLASALNLPETW 107 G +EI E L ++RL LL A +P Sbjct: 66 VGIFIEIDEAARSEILQSLFSDDSKTMEERLFEMAFQLLTSGNAITLKYWAERYFVPNAS 125 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANL--------LRKDPFLIP 158 + + L + Q ER L SR LGH I+ TE + LA+L + K+P ++ Sbjct: 126 LKKDLEVIAQWLERFDLLLVSRQRLGHLIEGTELNKRNALAHLSGLIPSGGIGKNP-VLD 184 Query: 159 LAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPG-DEIKQI 217 L ++ + + + L SL++ + + P + E+++I Sbjct: 185 LFQPYEIDIVRKALKEIQNNESIRFTDEALDSLVVHALIMIKRTRQRAPVFVEPAEMEKI 244 Query: 218 VEHSGLFLGDNAVRTLTGLI------------------------EKQHQQAQVISADNVQ 253 L + + VQ Sbjct: 245 ALRKEYEYASAFFTRLADSFQLSFPEAEIVYYTWHFISAKRSEEAESALIQDEKAEHVVQ 304 Query: 254 GLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 L++R+ + D L + H+ ++ + + N+K +P F M Sbjct: 305 LLIERMEKLTLFPFGNDHILASGLAVHMHSVISRIHYGFPITNPLLANIKRMYPYMFSMV 364 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQ-----NERQPIILLSDQNAIATINQ 365 + + +RE I + + + I L+F ++ER + +++ II+ ++ + + Sbjct: 365 ILALDDIREGFHISIPEDEAAYIVLHFQASIERLEGKRNIEKKRAIIVCHMGIGMSHLLE 424 Query: 366 LAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI 425 IE+ + +E+ E+ P II+ L+ A YI + + Sbjct: 425 AKIEQQYAAIEIAACIGKAEVAEALEKHHPDFIISTV--PLEKAGTGYIQISPLFGQEDK 482 Query: 426 EQIKHFLATAFIRQQPERFFS----APGSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 E++ F+ + R S + +V+ E + + L + + + Sbjct: 483 ERLSQFVDNLRTGKTEGREESFADLMEEDLIFLHVKKEHRYEVVEMLAMALYQKGYAAKE 542 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA 541 + RE I ++IPH R L QP+E +E ++ V + A Sbjct: 543 FIHSTVNRERNSATAIGGGISIPHGDPSMISRTAIAAAILDQPLEWGSEKVSLVFLLAVA 602 Query: 542 ADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFMELLHK 581 + + +++ + L + P + F+++L + Sbjct: 603 KENQRDIRRIIGKIASLSESPAAVHELVSAGNAAEFLKMLKQ 644 >UniRef50_B6EP62 HTH-type transcriptional regulator n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EP62_ALISL Length = 656 Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 87/623 (13%), Positives = 202/623 (32%), Gaps = 57/623 (9%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQLEI 63 R I + L +P ELAQ+ +S RTI DI LN L GY +I Sbjct: 24 RLNTIFEALRHEPLPQQELAQRCDISTRTIRTDISALNDILASYGAQIQHQRGTGYHFDI 83 Query: 64 FERRSFFQLLQKHDNDD------------RLLALLLLNTFTPRAQLASALNLPETWVAER 111 ++ F + ++ ++ LL LA+ + T + Sbjct: 84 YDEARFSDIEKQTQKMKTSPRNAKDRVVYLIMRLLSQEEECKLDDLANQWFVSRTSLQAD 143 Query: 112 LPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLAN-LLRKDPFLIPLAGITRDNLQH 169 + +++ E + S+ G + E+ +A+ L + P + Sbjct: 144 MTEIREILEQYNLEIVSKAHHGLKLFGEEQAIRACIAHVLFQFKPSDRTFINVCDHFFPE 203 Query: 170 LSTACDNQHRWPLMQGDYLS------SLILAIYALRNQLTDEWPQY-------------- 209 ++ + L+ +++ +L + Sbjct: 204 INLPSLKEDLLTLINQNHIRLTDEGLHHLLVYCGITLHRVKLNSVIHHVHQPKISNEAQN 263 Query: 210 -PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ--------HQQAQVISADNVQGLLQRVP 260 D K I L + + L+ I + + + LL V Sbjct: 264 AALDLSKTIEVLLSAPLPQSEIDYLSIQIAARRVTGVTIVDTEKHTEQLELTHFLLDYVN 323 Query: 261 GIASLNIIDAQLVE-NITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 + ++ + +L++ ++ H+ + + ++++K +P A+DM++ I+ Sbjct: 324 EHYNYDLRNDELLKRDLLCHITTMILRVKYQITIPNPLVDHIKRYYPLAYDMTVAAISHW 383 Query: 320 REQLDIPLFDSDLIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIERDVLN 374 + L IP + + ++ LER+ Q + +++ +I + + + R + Sbjct: 384 GKHL-IPDGEVGYLVMHIGVGLERNFALEEQQPPKALLVCDSGTSIMRLLESQLLRSLPQ 442 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 + S+ E ++ + +I + IT+ + T+ +EQ+ + Sbjct: 443 LDIQKIDSVREYESLTKVDADFVISTEKVSQKNRPT---ITISPLPTSFQLEQVNKLILM 499 Query: 435 AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE 494 F F + + + ++ A + + +I RE Sbjct: 500 NRSHPYMLDKFFDQRYFSVLSEP-TTQAELLKKFTAHFTEDNITPIEFYDSVIERENITS 558 Query: 495 NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI-NHVLIACAAADA-RHELKIFS 552 ++ +AIPH + + I ++ N I + + + D + ++ Sbjct: 559 TILGEGIAIPHSLGLLANETKVYTIISPHGIDWGNGKIAHVIFLFAINKDDYEEAMSLYD 618 Query: 553 YLASILCQHPAEIIAGLTGYEAF 575 + + + I YE F Sbjct: 619 LFVTFMNGKAVDTILECLSYEEF 641 >UniRef50_O31644 Putative phosphotransferase enzyme IIA component n=19 Tax=Bacillaceae RepID=MANR_BACSU Length = 648 Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 99/655 (15%), Positives = 222/655 (33%), Gaps = 87/655 (13%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 +N RQ +I+ LL +P + A + S +TI D+ + LN + G Sbjct: 4 INTRQKEILYLLLSEPDDYLVVQDFADRVQCSEKTIRNDLKVIEDYLNEHSHAQLIRKPG 63 Query: 59 YQLEIFERRSFFQLLQKH-----------DNDDRLLA----LLLLNTFTPRAQLASALNL 103 + + L + + +R+L LL+ +A+ + Sbjct: 64 LGVYLHIEEQERTWLSQQLHTEHFSSRQRSDKERMLHIAYDLLMNPKPVSAKDIAARHFV 123 Query: 104 PETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGI 162 + + + L +++ +R L SR LG ++ E + LA + + Sbjct: 124 NRSSIKKDLYAVEEWLKRFDLTLVSRQRLGLKVEGNERNKRKALARISDLIHNTAFTSQF 183 Query: 163 TRDNLQH--LSTACDNQHRWPLMQGDYLSS-----LILAIYALRNQLTDEWPQ------- 208 + H + Y + L+L + ++ + P Sbjct: 184 IKSKFLHYEVDFVTKEIKSLQKKHSLYFTDETFESLLLHTLLMVRRIKMKQPISLSPKEM 243 Query: 209 --------------------------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ 242 +P +E + H + VR ++ + Sbjct: 244 AAVKKKKEYQWTFACLQRLEPVFAIRFPEEEAVYLTLH----ILGGKVRYP---LQTEEN 296 Query: 243 QAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 + V L+ RV + ++ D L+ + HL L + +N++ Sbjct: 297 LENAVLPKVVGHLINRVSELKMMDFHKDQDLINGLNIHLNTVLQRLSYDLSVANPMLNDI 356 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH----QNERQPIILLS 355 K +P F + + + + + D+ + + + + L+F A+ER + ++ +I+ Sbjct: 357 KKMYPYLFHLIIDVLEDINQTFDLHIPEEEAAYLTLHFQAAIERMQGSSETHKKAVIVCH 416 Query: 356 DQNAIATINQLAIERDVLNCRV---IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNN 412 ++ + + IER V I L + + E+I+ ++ L++ Sbjct: 417 MGIGMSQLLRTKIERKYHQIAVMACIAKADLKDYIKKHEDIDLVISTIA----LENITVP 472 Query: 413 YITVKNIITAAGIEQIKHFLAT-----AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQ 467 +I V ++ +++ F+ ++ + + + E + Q Sbjct: 473 HIVVSPLLEPGEEKKLSAFIRQLGESHRQKQKTFQMLNNTTPFLVFLQQEAEHRYKLIEQ 532 Query: 468 ICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV 527 + L + ++ D A + RE I + +AIPH ++ ++ TL +P+E Sbjct: 533 LATALFEKGYVDKDYAVHAVMREKMSATNIGSGIAIPHANAKFIKQSAIAIATLKEPLEW 592 Query: 528 NNEVINHVLIACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFMELLH 580 NE ++ V + + + K S L + P + + T F+ L Sbjct: 593 GNEKVSLVFMLAVKHEDQTMTKQLFSELSYLSEQPAFVQKLTKETNVMTFLSHLD 647 >UniRef50_A0KQ06 Transcription antiterminator, BglG family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KQ06_AERHH Length = 634 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 105/629 (16%), Positives = 217/629 (34%), Gaps = 62/629 (9%) Query: 5 RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQLEI 63 R +++ LL +P ELA++ VS RT+ D+ LN + + +GYQL+I Sbjct: 8 RLHQLLTLLHAEPLPQEELARRLSVSTRTVRTDVATLNEIIATQGAHLIHQRGSGYQLKI 67 Query: 64 FERRSFFQLLQKHDNDDRL------------LALLLLNTFTPRAQLASALNLPETWVAER 111 + + F LL + + L + LL +LA L + Sbjct: 68 YNQELFEALLAAQEQESGLPRTSRERVLHLQILLLTAEQGIKLDELADTWYLSRAALQGD 127 Query: 112 LPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHL 170 + +++R + S+P G I E L LL ++ + + + L +L Sbjct: 128 MAEVRERLAHFGLAIDSKPRQGMRIQGGETAIRACLTQLLYQE---LLHSNPLQSLLPNL 184 Query: 171 ----------STACDNQHRWPLMQGDYLSS---LILAIYALRNQLTDEWPQYPGDEI--- 214 + + R L D + A+ LR E Q+ +++ Sbjct: 185 CPSKTLEVVGNHIHEQLGRHQLRLADESLQQLAIYCAVALLRQAAGHELRQFTSEDLTAP 244 Query: 215 -------KQIVEHSGLFLGDNAVRTLTGLIEKQHQQ--------AQVISADNVQGLLQRV 259 + G+ + L I+ + S V+ LL + Sbjct: 245 LLAVARDIYGELPTLTPPGEEEIACLAIQIQARLTADAPQLSPAMAAESEQLVEHLLAYI 304 Query: 260 PGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 ++ D QL ++ H+ L + +++K +P A+D++L I+ Sbjct: 305 HQHYPYDLRGDLQLRADLQTHISAMLLRVKYQIGSHNPLADHIKQYYPLAYDITLAAISE 364 Query: 319 LREQ--LDIPLFDSDLIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIERD 371 Q + + + ++ LERH Q ++L NA + + I+R+ Sbjct: 365 WIRQTPYRLTHHEIGYLVIHIGVGLERHYDIGYTRRPQALLLCDAGNATFRVLEARIKRE 424 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 ++ + S+ + + + +I + V + V T +EQ+ Sbjct: 425 YPQLQLTMLESVRDYEGLARIEQDFVISTVKAGEKNVPV---VQVAPFPTQYQLEQLGKL 481 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + R + F S + +IC+QL + + + + RE Sbjct: 482 VLVDRTRPYLLDKYFDADHFMVVTEPL-SQAALFDRICSQLEVEDLVESGFRGSLQERER 540 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN-EVINHVLIACAAA-DARHELK 549 ++ + +A+PH R + + Q ++ N E V + A D + Sbjct: 541 IVSTMLGDGIALPHSLGLLARCTLVYTVLAPQGIDWGNGESATLVFVLAIAKADYEEAMG 600 Query: 550 IFSYLASILCQHPAEIIAGLTGYEAFMEL 578 ++ +++ + + + + AF L Sbjct: 601 LYDLFLALMNEKASRSLLACRDFAAFKTL 629 >UniRef50_C5EW03 Phosphoenolpyruvate-dependent sugar phosphotransferase system n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW03_9FIRM Length = 670 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 98/659 (14%), Positives = 202/659 (30%), Gaps = 81/659 (12%) Query: 3 NERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA--G 58 ++RQ I+ +L T +LA+ S TI D+D + L G Sbjct: 4 SKRQKLIIKILADSDTALTCRKLAKLLDTSENTIRNDLDDIEGKLRESGAGAVERKPGVG 63 Query: 59 YQLEIFERRSFFQLLQ----KHDNDDRLLALLLLNTF---TPRAQLASALNLPETWVAER 111 +L + + Q + D +L +L +L+ L + + ++ Sbjct: 64 IRLVLVNQAFLQMDTQELGGQDDRKYYMLRRILCTGPGHVLTETRLSEELFVSRSSISRE 123 Query: 112 LPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDP---------FLIPLAG 161 L + Q + R G + E + +A L + L+G Sbjct: 124 LDAIGQWLGNYNLQIEKRRNHGISLKGKEFDKRRAIAELFFTKEADAGSDYARQVPDLSG 183 Query: 162 ITRDNL------------QHLSTACDNQHRWPLMQGDYLS---SLILAIYALRNQLTDEW 206 ++ L + A + +H DY++ + L++Y +N T ++ Sbjct: 184 YQKEMLGTIIPDTDTASIKSFIRALEKRHDSIQTHRDYVTLFLHIALSLYRSKNGCTVDF 243 Query: 207 PQ----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN----------- 251 + + + + E+ + VI + Sbjct: 244 SETDDFILKAASADVYREEIDRCFQDKMGYAPKESERDYIFLYVIFSGIFRNAGMDYMRS 303 Query: 252 -----------VQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMN 299 V L+ V + +NI D L EN+ HL + R ++ Sbjct: 304 SILESARFGSFVHEFLEMVSSVLGINIPQDGHLYENLKYHLSDMICRMKIGMTIRNPLLH 363 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER-HQNERQPIILLSD 356 +K +P+ F S F L + + + D++ I Y A E+ + I+ + Sbjct: 364 EIKDKYPSVFGASWAFSILFEKYFGLMVNDNEIAFIATYLLTAREQLNYYTVTACIVCNY 423 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 ++A + ++ N V + + + + + + S + + V Sbjct: 424 GVSVAQLICEKLKYRFPNIHVTDVLAYEKFRQLCQGGDGNWDMVISTIGPLEERQTVVCV 483 Query: 417 KNIITAAGIEQIKHFLATAFIRQQPE--------RFFSAPGSFHYSNVRGESWQHITRQI 468 I+T + I+ + T + + R Sbjct: 484 SPILTEEDEKSIEKLVKTVSRKLHQRKEAVDSRTKRRLCVPGLVAFGYSAADKMEAIRLG 543 Query: 469 CAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV- 527 L ++T +I RE + AIPH + R + L + V Sbjct: 544 SDMLKKLGYVTDGFVDSVIKREMAVSTEVGFGFAIPHGSPKFVRHSGIAVVRLDKTVLWH 603 Query: 528 NNEVINHVLIACAAAD----ARHELKIFSYLASILCQH--PAEIIAGLTGYEAFMELLH 580 + E ++ + + A D ELK F + ++L P + L + ++ Sbjct: 604 SGEAVDTIFLIAACTDKRPQDMDELKGFYKILAVLLDEEGPRKRFKSLNKAQDICNYIN 662 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 39/372 (10%), Positives = 116/372 (31%), Gaps = 35/372 (9%) Query: 73 LQKHDNDDRLLALLLLNTF-TPRAQLASALNLPETWVAERLPRLKQRYERT--CCLASRP 129 + K ++ +L + +LA L+ E + L ++ + + + +P Sbjct: 1 MNKSKRQKLIIKILADSDTALTCRKLAKLLDTSENTIRNDLDDIEGKLRESGAGAVERKP 60 Query: 130 GLGHF---------------IDETEEKRVILLANLLRKDP-FLIPLAGITRDNLQHLSTA 173 G+G + ++++ +L +L P ++ ++ + S+ Sbjct: 61 GVGIRLVLVNQAFLQMDTQELGGQDDRKYYMLRRILCTGPGHVLTETRLSEELFVSRSSI 120 Query: 174 CDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE-IKQIVEHSGLFLGDNAVRT 232 G+Y + + ++ + ++ I ++ G + R Sbjct: 121 SRELDAIGQWLGNY---NLQIEKRRNHGISLKGKEFDKRRAIAELFFTKEADAGSDYARQ 177 Query: 233 LTGLIEKQHQQAQVISAD----NVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPV 288 + L Q + I D +++ ++ + +I + + H+ L Sbjct: 178 VPDLSGYQKEMLGTIIPDTDTASIKSFIRALEKRHD-SIQTHRDYVTLFLHIALSLYRSK 236 Query: 289 WIAEHRQSSMNN--LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLY-FACALER 343 S ++ LKAA + ++++ +S+ I LY + R Sbjct: 237 NGCTVDFSETDDFILKAASADVYR--EEIDRCFQDKMGYAPKESERDYIFLYVIFSGIFR 294 Query: 344 HQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSH 403 + + + + +E + I + ++ + ++ Sbjct: 295 NAGMDYMRSSILESARFGSFVHEFLEMVSSVLGINIPQDGHLYENLKYHLSDMICRMKIG 354 Query: 404 YLLDDAVNNYIT 415 + + + + I Sbjct: 355 MTIRNPLLHEIK 366 >UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Bacillaceae RepID=C1PAW0_BACCO Length = 639 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 109/649 (16%), Positives = 230/649 (35%), Gaps = 81/649 (12%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSA 57 +L++RQ I+ LL + +P T +A++ GVS RTI +I + I ++ Sbjct: 3 ILSKRQKDILILLSKSKEPVTASWMAKELGVSDRTIRNEIKLMQNNTASHGFQIESTRGL 62 Query: 58 GYQLEIFERRSFFQLLQKHDNDD----------------RLLALLLLNTFTPRAQLASAL 101 GY +++ + F ++L + ++ L LLL F + Sbjct: 63 GYSVKVLDAGLFSKILNEISTEEHHLAGDFTDKDTRVLYILRRLLLETDFIKIESFIDEM 122 Query: 102 NLPETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRK-------- 152 + + + L +K+ + L +RP G ++ E + + L+NLL + Sbjct: 123 FVSLSTLQNDLKMVKEILDQYHLKLINRPHYGSKVEGDEYMKRLCLSNLLLERNQEAFLK 182 Query: 153 -----------------------DPFLIPLAGITRDNLQ-HLSTACDNQHR--WPLMQGD 186 + + I ++ I+ +NL H++ AC D Sbjct: 183 EDCLQLIDPELFKKIKEVIVQKVNKYKIEISDISLENLATHIAIACRRIQEGFVIEELAD 242 Query: 187 YLSSLILAIYALRNQLTDEWPQY-----PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH 241 L + N++ E + P EI I+ H L E Sbjct: 243 VLVDDHPFEKIVANEIIKEVEDFTSLTFPETEIDYIIVHLL-------GTKLLHKKELAE 295 Query: 242 QQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 + + +L R+ + + D + ++ +T H+ + + R +N+ Sbjct: 296 FSKFDEAGTIINCMLARLKAELNWDFRQDREFIQALTLHIRPAMNRLRYKMNIRNPLLND 355 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIIL----L 354 +K +PAAF+ ++ + E L + + + + I L+ ALER + ++ I Sbjct: 356 IKKKYPAAFEGAIIASKCIEEYLRMEVVEDEIAYIALHIGVALERMKLNKKKIKKVLIVC 415 Query: 355 SDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYI 414 + A + ++ + IA +++ ++ + +I ++ + +D Sbjct: 416 ASGVGSAKLLSYRLQNLYGQ-EIEIADTINYYNLSSYDLSFIDLIISTVPIKEDFGVPVQ 474 Query: 415 TVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVA 474 V + I+ I FL+ R Q S + + + + + R +C +L Sbjct: 475 VVNTFLEDKDIQAINGFLS----RTQNVAEKYLHPSRIFLQLALQDKESVIRFLCDELYK 530 Query: 475 QHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV-IN 533 Q + D ++ RE N +AIPH + TL P+ + + + Sbjct: 531 QKLVPKDYVNLVLERESITPTCFGNLVAIPHPMVPVTKETFWTVCTLKSPIHWHEQQMVQ 590 Query: 534 HVLIACAAAD-ARHELKIFSYLASILCQHP-AEIIAGLTGYEAFMELLH 580 V + ++ L SI+ + + + M + Sbjct: 591 FVCLLNIKEGTQTDLDDMYKKLISIIENRSVVQKVIKSKTADELMAFIK 639 >UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_LISW6 Length = 638 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 103/632 (16%), Positives = 224/632 (35%), Gaps = 61/632 (9%) Query: 5 RQLKIV--DLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQL 61 R +IV L+ + + EL + V+ RTI DI +N L S GY+L Sbjct: 10 RWKQIVHMLYLKMEFISGRELGEALAVNPRTIRNDIKMINEILKTGGNQIESLSGVGYRL 69 Query: 62 EIFERRSFFQLLQ----------------KHDNDDRLLALLLLNTFTPRAQLASALNLPE 105 + + + ++L + D + LLL N + +LA L + + Sbjct: 70 VVSDEKILREVLLDNSVGRANMNIVPMFAEDRTDYIIRYLLLNNDYVKLEKLAEELFVSK 129 Query: 106 TWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITR 164 + + + +K++ E + R G I E + L + + R Sbjct: 130 STINLDILEVKRKLKENGLKVEKRASYGIRITGVEVAIRFCFSRYLLVESANPLITDTER 189 Query: 165 DNLQHLSTACDNQ-------HRWPLMQGDYLSSLILAIYALRNQLTDE------------ 205 + ++ Q M + +LI+ I ++ D Sbjct: 190 NFFSEVNLEMIEQVVISNIAKYNIHMTDISVKNLIIHIAIAVCRVKDNCYVHVTDLEDIE 249 Query: 206 --WPQY--PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD---NVQGLLQR 258 P++ D IK+I G+ ++ + L + +++++ + V +L + Sbjct: 250 FSIPEFRAAQDIIKEIDLSEGIHFPESEISYLLLHLSSKNRKSDFNNYREYIIVDKMLTK 309 Query: 259 VPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 + + + D +++ NI HL + + + + NLK+ +P AF++ L Sbjct: 310 IKELYGYDFKQDQKMISNIALHLKPAINRMKFNMNIQNPYLKNLKSNYPLAFELGLVAKD 369 Query: 318 LLREQLDIPLFDSD--LIGLYFACALER--HQNERQPIILLSDQNAIATINQLAIERDVL 373 +L ++L + +++ + ++F L++ ++++ +I+ + + + + + ++ Sbjct: 370 VLEQELKTKVNEAEVGYLAIHFLYGLDKEVVSDKQKVLIVCASGLGTSQLLESKVRKEFE 429 Query: 374 N-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 N +I S E + ++ L ++ V +T A I I + Sbjct: 430 NALDIIGVYSFKEYEQSGTMCDFVISTVPLRMKLH----PFVQVSPFLTKADIRNITALI 485 Query: 433 ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGE 492 + Q S + + + + + L+ + AD + RE Sbjct: 486 KKDAMENQFNVDKVFKESLFLI-SDKKDKEQVLIDLASLLLENKIVGADYLPSLFEREEI 544 Query: 493 GENLIVNRLAIPHCWSEQERRFRGFFITLA-QPVEVNNE-VINHVLIACAAADARHELKI 550 + N LA PH + + V+ N E V + + +L Sbjct: 545 VPTYLGNGLAAPHPIEANVQETVIGVCICSGGGVKWNEEDQAQVVFMLAVKNRQQQQLAT 604 Query: 551 FSYLASILCQHPAE--IIAGLTGYEAFMELLH 580 L S L + P + +T +E FM +L Sbjct: 605 VYELISNLVESPKAMGELKRVTNFEGFMRVLQ 636 >UniRef50_C4V215 N(Pi)-phosphohistidine--sugar phosphotransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V215_9FIRM Length = 630 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 90/624 (14%), Positives = 192/624 (30%), Gaps = 52/624 (8%) Query: 4 ERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-GYQL 61 R L+++ L+ + T L+++ G+S RT+ DI LN + + + G L Sbjct: 2 NRWLQLMLLMPEDEFITYKALSEELGISVRTVYDDITRLNEMMLEHGAQLVARTHHGVTL 61 Query: 62 EIFERRSFFQLLQ-------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 ++ +R F L + + L + L AL++ + + Sbjct: 62 DVHDRARFLHFLDALGSGDTILGDTSEVRIGKIIRTLFYSSAPCKSDNLCEALHISRSTL 121 Query: 109 AERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVI----LLANLLRKDPFLIPLAGIT 163 + L ++ L +P G I E+ + +L D ++ Sbjct: 122 KKDLRGVRALLGMYDLSLVHQPYAGLSIRGAEKDIRRCLVRMKRRILAGDGGILHQEVQQ 181 Query: 164 RDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRN---QLTDEWPQYPGDEIKQIVEH 220 + + D++ + ++I +R + P P + + Sbjct: 182 TGRVLQEIFKQYDCRMAAYSFQDFVLHIDVSIERMRQGHEIRDEALPSLPAAPQDEALSR 241 Query: 221 SGLFLGDNAVRTLTGLIEKQHQQAQVISADN----------------VQGLLQRVPGIAS 264 + + + R E ++ ++S V +L V Sbjct: 242 AVVVAMETQYRMRFSAGECRYILLLLMSRKVLSWKQASTAAADVYAVVMEMLAAVQRTFC 301 Query: 265 LNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 + D +L+ +++ HL+ + + ++ P A++M+ +LR Sbjct: 302 YDFSHDFELIASLSTHLIPLRTRLLCGMQQENPVGREIREGGPLAYEMANVACGILRSAY 361 Query: 324 DIPLFDSD--LIGLYFACALERHQNERQP--IILLSDQNAIATINQLAIERDVLNCRVII 379 + I LYF ALER + +R+ +I+ A + IE + + + Sbjct: 362 GCEASADETGYIALYFHVALERMRAQRRKRVLIVCGAGKGAAMLLAHTIEENYGK-YLEV 420 Query: 380 ARSLSELVAIREEIEP-LLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIR 438 + +++ I++ V + AG + H + Sbjct: 421 IGTYEAADFSDTDLQAADYILSTIPLRETLPVPVIELGDVLPWQAGGDLRAHLIHDRQEA 480 Query: 439 QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV 498 V + + R+ICA A + D +I RE G + Sbjct: 481 MLAYFA----EQLFLPQVSAATREDALRKICAAAEAVEELPQDFYDAVIERENIGGTALG 536 Query: 499 NRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASIL 558 N +A PH R L QP+ E + + +L F + Sbjct: 537 NLVATPHPARPMGERSFVVVAVLNQPILWGEEDAQILFLISMKDGGDRDLPQFYKMIGRF 596 Query: 559 CQH--PAEIIAGLTGYEAFMELLH 580 + + ++ + Sbjct: 597 LTNRTLVRRLIKRPTFDELRTIFS 620 >UniRef50_C2FPV9 Frv operon regulatory protein n=3 Tax=Lactobacillus plantarum RepID=C2FPV9_LACPL Length = 582 Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats. Identities = 123/588 (20%), Positives = 247/588 (42%), Gaps = 14/588 (2%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 MLN R+L+I+ LL++ + +LA S RT++RDI +N L ++ Y Sbjct: 1 MLNSRELRIILLLQEHDLSGEDLAALLETSRRTVVRDIARINGLLRSESIGSIESVKKYH 60 Query: 61 LEIFERRSFFQLLQKHDNDDRLLALLLLNTF-TPRAQLASALNLPETWVAERLPRLKQRY 119 L + R + +LL + +++ L+ L LL + +L + + + ++ ++Y Sbjct: 61 LLVLNRANLNRLLTQSNHESVLVLLNLLVSPNITMGELIERTFMSRQSIMNCIEKINRQY 120 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIP----LAGITRDNLQHLSTACD 175 + + RP +G + ++ +LA L+ D L+ L + D L + Sbjct: 121 AKILKIRLRPRIGISVSVNHISKIDILAALISDDHQLVEKRFKLINQSED-LARIRMIVK 179 Query: 176 NQHRWPLMQGDYLSSLILAIYALRNQ-LTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLT 234 Q P DYL+ L+ + ++ + + +++ SG+ +A TL Sbjct: 180 QQ--IPEKMFDYLTDSQLSAQIMACTLISKDNTVIMKSTLYKVLLKSGVPHLQSA--TLA 235 Query: 235 GLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHR 294 + + Q ++ VQ ++ +L + V I HL R P Sbjct: 236 VFFDAKKQLLNHMTIRQVQLAVRATRSRYTLAAFNHSFVNEIFKHLCRSAMFPTIAPASL 295 Query: 295 QSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILL 354 ++ LK P AFD + L++ + D + I LY A+E ++ Sbjct: 296 SEQISYLKVQNPFAFDFAFDLSKKLQQCFESVQIDDEYIALYVLHAIESPTARNVRTLMY 355 Query: 355 SDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINN--SHYLLDDAVNN 412 + Q ++A IN++ I + + N + + S +L + I L+I N L +N Sbjct: 356 ATQQSVANINKMIITQKISNIDIEMVFSKEQLESRLNYINYNLVIGNGVHPNDLQLPINF 415 Query: 413 YITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQL 472 T +I+ +E +K + ++I++ F F+++ + + + Sbjct: 416 DSTFNGVISLDELEHLKSLSSESYIQKNL-SSFLPKSHFYHAPTKYINVNQTLKAGLTNF 474 Query: 473 VAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI 532 Q +T D+++ ++ARE G L++N +++PH +E ++ F IT ++++ I Sbjct: 475 AEQGLLTNDQSKALLAREAAGNQLVLNHVSLPHASTELSDAYKVFAITFDGIMKIDGNPI 534 Query: 533 NHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLH 580 +LI A ++FSYL + L Q + + YE ++ L Sbjct: 535 YLILIVLANEKRADSGQVFSYLYTRLKQLSNVQLQNVDTYETLIKYLK 582 >UniRef50_C0D9V6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9V6_9CLOT Length = 642 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 106/642 (16%), Positives = 215/642 (33%), Gaps = 65/642 (10%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M N+RQ +++ LL + T +LA+ VS RTI D++ +N + I ++ G Sbjct: 1 MQNKRQEQLLALLAERRDYMTSRQLAEILQVSDRTIRSDVEAINRR-SSPPPIESNVRQG 59 Query: 59 YQLEIFE---------RRSFFQLLQKHDNDDR----LLALLLLNTFTPRAQLASALNLPE 105 Y+L + DR + LL L + + Sbjct: 60 YRLNPEAAVLPPASELDAGIQKDQLPQTPGDRCIYIIHKLLFEARELNLTVLQGQIYVSG 119 Query: 106 TWVAERLPRLKQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLLRKDPF--LIPLAGI 162 + L R+++ E L R + E + +LL + + L + Sbjct: 120 YSIENDLKRIRRMLEPYANLKLVRSRECISLKGDEASKRRFYRDLLVAEVQENFLNLNTL 179 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDY-LSSLILAIYALRNQLT------------DEWPQY 209 + L + DY + + + L + ++ Q Sbjct: 180 AHLYRSFDLIEVKDIFVEVLEEYDYAIHEALFPMLILHAGTSIERMNCSNYINMEDNSQG 239 Query: 210 PGDEIKQIVEHSGLFLGDNAVRTLTGLIE-----------------KQHQQAQ---VISA 249 D I+ + + + E + + + Sbjct: 240 LSDTIEYQISKTFFDRIGKRLHIQVHDGEIGMFALVIMGRRASNYTSDYVNLNGRWLNTK 299 Query: 250 DNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 V L +V + L+ DA L+ + H+ + + ++ +K +P Sbjct: 300 KLVAEALDKVFCLFGLDFREDADLIAGLKMHIHGLIDRLKTGVKLEDVFLDEIKRKYPLV 359 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN--ERQPIILLSDQNAIATIN 364 F+M ++ L+E+L + + D + I L+ A ER + +++L + + + Sbjct: 360 FEMGIYVGEFLKEKLGLSISDVESGFIALHLGAASERLNAARRYRAVMILPHNQSFSAMC 419 Query: 365 QLAIERDVLNCRVIIARSLSELVA-IREEIEPLLIINNSHY---LLDDAVNNYITVKNII 420 + I D+ R+ + R+ S I E++P LI+ L + VN + V + Sbjct: 420 EKKI-SDMFRERMEVVRTFSYFEEEIVREMDPDLILCTFPIEHRLDVETVNINLFVDSQT 478 Query: 421 TAAGIEQIKHFLATAFIRQQPERFFSA-PGSFHYSNVRGESWQHITRQICAQLVAQHHIT 479 + ++ + F + + +Y ++ + + +CA L + Sbjct: 479 ESNILQAVNRLDQKRFKLEFASHIGNLVRKEHYYQDLDLNTPGQVIDLLCADLEQAGIVE 538 Query: 480 ADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIAC 539 + + + RE VN AIPH + + L PV+ + V++ Sbjct: 539 PEFKEIVRKREEMSPTSFVNAFAIPHAFGAFAKNSTIAVAQLKNPVKWGGFEVRLVMLFA 598 Query: 540 AAADARHELKIFSYLASILCQHPAE--IIAGLTGYEAFMELL 579 R +KIF S + P E I YE F++ + Sbjct: 599 INEGDRRMIKIFFDWVSNVVNQPQELAKICSSCSYEEFIDRI 640 >UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan operon n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMS7_OCEIH Length = 648 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 97/654 (14%), Positives = 220/654 (33%), Gaps = 81/654 (12%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 ++ R ++ Q P T +A V+ RT DI LN + + S G Sbjct: 1 MDTRLRVMLKEFIQAKAPLTSTFIANINQVTSRTTRDDIKKLNQHIQLHGAVIQSIKGKG 60 Query: 59 YQLEIFERRSFFQLLQ----------------KHDNDDRLLALLLLNTFTPRAQLASALN 102 YQL I +F + L + + LL + QLA + Sbjct: 61 YQLSIQNEDTFHRFLTMEWNEDMDSRKTPNTPEQRVKYIVRRLLFTMDYIKLEQLADEMY 120 Query: 103 LPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK--------- 152 + ++ + + ++Q+ + +P G I E K +A Sbjct: 121 ISKSTIQNDMKLVRQQLNPFELDIHVKPSHGIKIIGEEIKIRFCMAEFFVDRENHSHADV 180 Query: 153 ----------DPFLIPLAGITRDNLQ----------------HLSTACDNQ--------- 177 D + + I L H++ A Sbjct: 181 KTHCEFVTLPDQQMSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFN 240 Query: 178 --HRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTG 235 HR + + +A + + +P E + H LG V + Sbjct: 241 AAHREEMQDMKDTKAYFVAEKIVEDTEKQLHLSFPKTETTYVALHL---LGTKMVGSTNI 297 Query: 236 LIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHR 294 + L+++ L I D +L+ ++ HL + + R Sbjct: 298 DSTDIESILDPSIYKLIMLSLEKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIR 357 Query: 295 QSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER---Q 349 + ++K +P AF +++ ++ E+ DI + +++ + L+ A+ER++ + + Sbjct: 358 NPMLTHIKKNYPLAFQAAVYAGVVIEEKTDITIDENEIGYLALHIGAAMERNKLRKGPKR 417 Query: 350 PIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDA 409 +++ + A + ++ ++ + + ++ + +I +S + +D Sbjct: 418 CLVVCASGMGTAQLIYYKLKSKF-EGQMEVVGTTEYYRLRDYPLDDIDLIISSIPIKEDL 476 Query: 410 VNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQIC 469 I V II ++ I+ F++ + S + N+ S Q + + Sbjct: 477 CIPVIEVNAIIEEEDLQHIQSFISGK---KTNLLSQYLHESNIFLNLEASSKQDVLEHMT 533 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 A ++ + D I RE N +AIPH + + + TL +P+ ++ Sbjct: 534 AHVIENEFVDTDLLDSIYEREKIAPTAFGNLVAIPHPLTPKSDQTFISIATLREPIIWSD 593 Query: 530 EVINHVLIACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFMELLHK 581 + + + + +++ +L+ + P + + AF+E++ + Sbjct: 594 KTVQFICLLSVKRNSQEDLQSLYETLGKIIDRPSIIQKLVKAKDKNAFIEIIEQ 647 >UniRef50_A8RTN9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTN9_9CLOT Length = 639 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 105/639 (16%), Positives = 216/639 (33%), Gaps = 62/639 (9%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M N+RQ +++ +L + T +LA VS RTI D++ +N I ++ G Sbjct: 1 MQNKRQEQLLAILSERRDWMTSRQLAGLLQVSDRTIRSDVEAINKH-TDPPPIESNVRQG 59 Query: 59 YQLEIFERRSFFQLLQKHDND----------DRLLALLLLNTFTPRAQLASALNLPETWV 108 Y+L R + + + D + LL L S + + + Sbjct: 60 YRLCEEARPALASGAETREADIPQTPGARCAYMIQKLLFEVKELNLTMLQSQIYVSGYSI 119 Query: 109 AERLPRLKQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLLRKDPF--LIPLAGITRD 165 L R+++ E L R + E + +LL + + L + Sbjct: 120 DNDLKRIRKMLEPYSGLKLVRNKECISLKGDEASKRRFYRDLLVAEVQENFLNLNTLAHL 179 Query: 166 NLQHLSTACDNQHRWPLMQGDY-LSSLILAIYALRNQLT------------DEWPQYPGD 212 + L + DY + + + L + +E Q D Sbjct: 180 YRSFNLIEVKDIFVDVLEEYDYSIHESMFPMLILHAGTSIERMNCANYINMEEGMQGLED 239 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEK--------------------QHQQAQVISADNV 252 I+ + + + E + + + V Sbjct: 240 TIEYQIAQTFFDRISKRLHITVHDGEVGMFALVIMGRRASNYTSDFVNYNGKWMNTKKLV 299 Query: 253 QGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDM 311 L++V + L+ DA LV + H + + +K +P F+M Sbjct: 300 AEALEQVYALFGLDFRQDADLVAGLKMHFHGLIERVKNQVRMEDVFVEEIKRKYPLVFEM 359 Query: 312 SLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN--ERQPIILLSDQNAIATINQLA 367 ++ + L ++L+ P+ D + I L+ A ER + + + +++L + + + Sbjct: 360 GIYVLEFLEQRLERPISDVESCYIALHLGAASERMNSVRKYRAVMILPHNQSFSDMCVKK 419 Query: 368 IERDVLNCRVIIARSLSELVAIREE-IEPLLIINNSHY---LLDDAVNNYITVKNIITAA 423 I D+ R+ + ++ ++P L+++ L + V+ + V + + Sbjct: 420 I-SDMFRERMEVVKAFGYFEEDEVSALDPDLLLSTFPLEHGLDVETVSINLFVDSETESK 478 Query: 424 GIEQIKHFLATAFIRQQP-ERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADE 482 ++ I F + ++S V + + I R +CA L + + + Sbjct: 479 ILQAINRLDKKGFRLEFTSHIGNLIRKEHYHSQVDMDQPEEIIRMLCAGLEKEGIVEPEF 538 Query: 483 AQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAA 542 + ++ RE VN AIPH + R L PV+ + V++ Sbjct: 539 TEVVLKREQMSPTSFVNTFAIPHAFGAFARNSTIAVAQLKNPVKWGAFEVRLVMLFAINE 598 Query: 543 DARHELKIFSYLASILCQHPAE--IIAGLTGYEAFMELL 579 +KIF S + P E + YE F++ + Sbjct: 599 GDARMIKIFFDWVSNVVNQPEELAKLVAPCSYEEFIDRI 637 >UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=Thermoanaerobacter RepID=B0KCF7_THEP3 Length = 652 Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats. Identities = 101/654 (15%), Positives = 219/654 (33%), Gaps = 89/654 (13%) Query: 5 RQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-------- 54 R L+I+++L +QP T +A VS +TI D+ + K Sbjct: 3 RILEIINMLLNSEQPLTVDYIANTLKVSNKTIRNDLKKAEEFVQQKGVKIIKKPRVGIVL 62 Query: 55 ---GSAGYQLEIFERRSF---FQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 + +L ++S + + L L + +LA L + + Sbjct: 63 EGPRNKKLELVDEIKKSLDFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSRVTI 122 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLL----------------- 150 + L +++ + L +P G + EE +A+L+ Sbjct: 123 HKDLQSVEKWLNKFNLKLLKKPNYGIEVVGDEENWRNAVASLIVSTKEQKELKEFLYNDY 182 Query: 151 ------RKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLIL----------- 193 R L L I L+ + + +++ ++ ++S +I Sbjct: 183 TGRIDYRTLMQLRELFDIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLKHK 242 Query: 194 ----------------AIYALRNQLTDEWP-----QYPGDEIKQIVEHSGLFLGDNAVRT 232 Y + Q+ E P EI IV H Sbjct: 243 KDVKLSKAVLNNLKQKDEYVIAQQMAKEIEAKFNVVLPESEIGYIVLHIIGTKMQQNKIE 302 Query: 233 LTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIA 291 L + + ++ + + ++ SL++ D QL+ + HL + + Sbjct: 303 DVNLELEDEESIELAVIMS-KEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYGL 361 Query: 292 EHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ 349 R +N++K +P + ++ + + L + + + I L+ A+ER + + Sbjct: 362 TLRNPLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAAVERAKKPLK 421 Query: 350 PIILLSDQNAIATINQLAIERDVLNCRVI-IARSLSELVAIREEIEPLLIINNSHYLLDD 408 +++ + A + +E+ + I S+S +I +I+ ++ Sbjct: 422 ALVVCTTGIGTAQLLAARLEKSFKQIEIKDIVSSVSLHESILNDIDIVISTVPIEIN--- 478 Query: 409 AVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQI 468 +I + ++T I+++ F+ R Y + + ++ Sbjct: 479 --KPFINISPLLTQNDIKRLDEFIQALNKRSNLIDTQLLDVDGIYL-----KKEDLLNKV 531 Query: 469 CAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVN 528 C +L + ++ + Q +I RE I N +AIPH E + + L P+ + Sbjct: 532 CMELHKKGYVKEEYIQDVITREKIASTAIGNGIAIPHGLPEHVNKSVFTVVRLKNPIAWD 591 Query: 529 NEVINHVLIACAAADARHELK-IFSYLASILCQ-HPAEIIAGLTGYEAFMELLH 580 E ++ + + + + IF L + L E I E ++LL Sbjct: 592 EEKVDMLFMISLTQSDIAKSRYIFRKLYNKLESPEFVENIKKAKSREEIIKLLE 645 >UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 Tax=Bacillus cereus group RepID=A0RA54_BACAH Length = 651 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 100/646 (15%), Positives = 217/646 (33%), Gaps = 78/646 (12%) Query: 4 ERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSAGYQ 60 +R + I++ ++ LA + VS +TI +DI LN L + GY+ Sbjct: 11 QRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQRGTGYE 70 Query: 61 LEIFERRSFFQL--------------LQKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 LEI + + F + + L +L + +QLA + + ++ Sbjct: 71 LEIIQTKKFEEFCVSLFQKQTEKVPTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKS 130 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANL-------------LRK 152 V + + R + RP G I E L+ + Sbjct: 131 TVNLIMKDVTDICGRYQLQIEKRPYYGIRIVGEEFHIRSCLSQYGLPRYDHTPFHERFEQ 190 Query: 153 DPFLIPLAGI----------------------TRDNLQHLSTA---CDNQHRWPLMQGDY 187 + + L I + + H++ A C++QH + + Sbjct: 191 NDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKGLNAEQ 250 Query: 188 LSSLILAIYALRNQLTDEWP-----QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ 242 +I Y + Q+ E +P +E+ + H + R + Sbjct: 251 SELIIKKEYTIAKQIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKDRYENV----EEL 306 Query: 243 QAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 + + A L + + D +L+ HL L + R + +K Sbjct: 307 LGKDLYAFMQHILFKVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVK 366 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER---HQNERQPIILLSDQ 357 +P AF++++ ++ E + +S+ I ++F A+ R +++ +++ + Sbjct: 367 KNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQNQKKRCLLVCATG 426 Query: 358 NAIATINQLAIERDVLNCRVI--IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 A + + I + I I V + + II+ H V Sbjct: 427 QGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLPVPVIKV 486 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 ++IK F + N + + + + +C + + Sbjct: 487 NSIF----DDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKATEK 542 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 +++ + + ++ RE + N +AIPH + F TL + V+ ++ + + Sbjct: 543 NYVPENFYESVMERESTSPTAVGNLVAIPHPMQLLSEKTFLMFCTLNKAVDWGDKKVQVI 602 Query: 536 LIACAAADARHEL-KIFSYLASILCQHP-AEIIAGLTGYEAFMELL 579 ++ + +L K++ +L I+ E +A E F E+L Sbjct: 603 ILFSVKRNNNEDLQKLYDFLYDIMSNQNTIEKLAQAKVVEDFQEIL 648 >UniRef50_C0CTD3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTD3_9CLOT Length = 656 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 83/622 (13%), Positives = 208/622 (33%), Gaps = 48/622 (7%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAG 58 L ++Q+++++ L Q ELA++ G+S RT++R + L L + G Sbjct: 34 LTQKQIQLLNCLMHQENAIGADELAKRLGISARTVMRYLSVLAEELETFGVCISQKRGQG 93 Query: 59 YQLEIFERRSFFQLLQKHD--------NDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 Y LE +R + LL + + ++ ++ +L+ A+ L + + + Sbjct: 94 YVLE-GDRAALKPLLTQKEYRQKDGDKRIHEMILEIIDQDEITIEKLSEAMFLSPSTLNK 152 Query: 111 RLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF----LIPLAGITRD 165 P +K+ L+ +P G I E + LL ++ + I+ + Sbjct: 153 MTPDVKEFLGRYNLTLSGKPHYGLSITGGETEIRTLLGDIGLDYCNARLVNTGIYNISEE 212 Query: 166 NLQHL-STACDNQHRWPLMQGDYLSSLILAIYALRNQLTDE----------------WPQ 208 L + D + L+ D + ++A + + + Q Sbjct: 213 ELNRVDRLVFDRIQEYGLIVADMDLNNLIARIVVALSRSRKGRHVTGMSLTAPVTGHNYQ 272 Query: 209 YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD-------NVQGLLQRVPG 261 ++ + + + + + + V A+ V L + Sbjct: 273 MILSIMETLGQELDIEITEEECLYVMVYSGFIGYDLNVADAEGCREMRRFVDDFLDEISR 332 Query: 262 IASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 + +N D +++ ++ HL + + +K +P + ++ Sbjct: 333 LTGINYDRDEKVMNVLSLHLKALMQRARAGNYSPNPIIAQIKNRYPLEMNYAILMAQRFE 392 Query: 321 EQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVI 378 E+ + + + + + +Y + + +IL + + + I+ ++ N + Sbjct: 393 ERFGVSINEDEIGYLTVYLGVYEPQAGERVKAVILCNYGIGTSQMILEKIQSEIQNILIC 452 Query: 379 IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIR 438 + L + +++ V ++ + A + +I Sbjct: 453 GVYPVRYLDLALDRKPDVILSAVPVENYGGDVPVIVSHDLLSEKAIAGIQEQLWQKIYIE 512 Query: 439 QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV 498 ++ R+F + ++ ++ LV + I + I RE + Sbjct: 513 KELMRYFDPDC---FGHIDAADRFQAIEKLGGLLVEKKGIGREVVDAIGKRERISSTEVG 569 Query: 499 NRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASIL 558 N +A+PH ++ L P++ NE + V +AC +IF L ++ Sbjct: 570 NLVAVPHVLTQGTFSSCIAIGILNHPIQWGNERVQMVFLACFNQSRDQYARIFRTLYKVV 629 Query: 559 -CQHPAEIIAGLTGYEAFMELL 579 + ++ F ++ Sbjct: 630 HSDELVRRLIQAENFQEFQTIM 651 >UniRef50_D1P1R2 Transcription antiterminator, BglG family n=5 Tax=Enterobacteriaceae RepID=D1P1R2_9ENTR Length = 645 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 88/636 (13%), Positives = 214/636 (33%), Gaps = 63/636 (9%) Query: 2 LNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQ 60 + +R +I + + ELA+ VS RTI DI+ +N + + GY+ Sbjct: 5 IQQRHNQIFSRILNEVVPQDELAKLFSVSTRTIRSDINEINELIEAHSAHIVYERGRGYR 64 Query: 61 LEIFERRSFFQLLQKHDNDDRLLA------------LLLLNTFTPRAQLASALNLPETWV 108 L+I F Q++DN+ + LL+L+ +A + + + Sbjct: 65 LKIENAEQFSAFTQQNDNNSNIPRTSKERIDALLLKLLMLSLPVKLDDIAEEWFVSRSTI 124 Query: 109 AERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRV-ILLANLLRKDPFLIP-------- 158 + + +++ + L S P G + +E + L R+ I Sbjct: 125 QQDMGAVREHLHKYQVQLESIPHQGIRLSGSEWAIRACMTEALWRQFIEQITPDLATFHP 184 Query: 159 --LAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLI-LAIYALRNQLTDEWPQYPGDEI- 214 + + + + N+ + +L + A+ LR E + Sbjct: 185 DCIDNLDLTYIDKVIHNSMNRFDIRISNEGHLYLVFNCAVTILRITRGHELTVNTKNNAV 244 Query: 215 --------KQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD-----------NVQGL 255 +I + FLG++ + Q ++ + D + + Sbjct: 245 EEVINKACDEISKGLIYFLGNDLSHAELNFLHDQIIAQRINNQDSTTQKSGSHNALSEHI 304 Query: 256 LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 L + + ++ D +L +++ HL + + ++++K +P A+D++L Sbjct: 305 LNYINDRYNYDLRSDEKLKKDLNTHLSSLITRLQYHISTPNPLLSDIKQYYPFAYDVTLS 364 Query: 315 FITLLREQ---LDIPLFDSDLIGLYFACALERH-----QNERQPIILLSDQNAIATINQL 366 +T + + + + ++ +LER+ + + +++ N+ + + Sbjct: 365 ALTSASKHLLPYPVNEDELGYLAVHIGVSLERNYGAGSMRQTEVLVVTDAGNSTFRVVES 424 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 I R+ + +L E ++ E E +I + V + Sbjct: 425 KIMREFPQLKFSRGLTLQEYESLSEVSEDFVITTVRISEKNKPVIKIAPFPTPYQLEQVG 484 Query: 427 QIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 ++ T F S + + + +C++L + ++TA+ + Sbjct: 485 RLAMVDQTRPY----IIERFFDERFFMVINEKISQEALFQTVCSKLQQEGYVTAEFYPSL 540 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI---NHVLIACAAA- 542 RE L+ +A+PH + I + +E N E + + + Sbjct: 541 QERESIVSTLLGEGIALPHSLGLLANKTVVVTILAPKGIEWNKETKENAYVIFLLAISKT 600 Query: 543 DARHELKIFSYLASILCQHPAEIIAGLTGYEAFMEL 578 D + I+ + + + + + + F + Sbjct: 601 DYEEAMAIYDLFVTFVKEKTTRRLVNVKNFNEFQAI 636 >UniRef50_C5EV18 Transcription antiterminator BglG family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV18_9FIRM Length = 640 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 110/642 (17%), Positives = 211/642 (32%), Gaps = 67/642 (10%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M N RQ +++ +L + T +LA GVS RTI D++ +N + A I ++ G Sbjct: 1 MQNVRQEQLLAILSERGDWMTSRQLAGLLGVSDRTIRSDVEAINKRI-TPAPIESNVRQG 59 Query: 59 YQLEIFERRSFFQLLQKH-----------DNDDRLLALLLLNTFTPRAQLASALNLPETW 107 Y++ R S +K+ + LL L + + Sbjct: 60 YRVMEDARTSIPAPEKKNLGPEVPQTPGGRCIYIIQKLLFETRELNLVSLQDQIFVSGYS 119 Query: 108 VAERLPRLKQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLL---------------- 150 + L R+++ E L R + E + +LL Sbjct: 120 IDNDLKRIRRMLEPYTNLKLVRNRECISLKGDEASKRRFYRDLLVAEVQENFLNMNLLAG 179 Query: 151 -RKDPFLIPLAGITRDNLQHLSTACDNQHR--WPLMQGDYLSSLILA------------- 194 K LI + I D L+ + L G + + A Sbjct: 180 LYKSFDLIAVKDIFVDVLEEYDYSIHESMFPMVILHAGTSIERMNCANYVNMDNGSQGLE 239 Query: 195 ---IYALRNQLTDEWPQYPGDEIK--QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA 249 Y + D + E+ ++ + + +G A + + + + + Sbjct: 240 DTIEYQISMTFFDRISKRLHIEVHDGEVGMFALVIMGKRASNYTSDFVNFEGKWLN--TK 297 Query: 250 DNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 V L + + L+ D L+ + H+ + A + + +K +P Sbjct: 298 KLVAEALDGIYSLFGLDFREDGDLIAGLKMHIHGLIDRVKAKAHMQDVFVEEIKRKYPLV 357 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN--ERQPIILLSDQNAIATIN 364 FDM ++ + LL E+L+ + + + I L+ A ER + + + I+++ + + Sbjct: 358 FDMGIYVVELLEEKLEASISEVESCYIALHLGAASERINSVRKYRTIMIIPHNQTFSDMC 417 Query: 365 QLAIERDVLNCRVIIARSLSELVA---IREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 I ++ RV + + + +L + LD + T Sbjct: 418 VKKI-SEMFRERVEVVGIFRYFEEETVSSLDPDLILTTFPLEHKLDVPTVPINLFVDSET 476 Query: 422 AAGIEQIKHFLATAFIR--QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHIT 479 +GI Q + L + + NV + + I R +C L + + Sbjct: 477 ESGILQAVNKLDKKQFQLEFTSHIGSLIRKEHFHENVTLGTPEEIIRLLCRGLEKEGIVE 536 Query: 480 ADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIAC 539 D ++ RE VN AIPH + L PV N + V++ Sbjct: 537 PDFKDIVLKREQMSPTSFVNAFAIPHAFGAFASHSTIAVAQLKSPVRWGNFDVGLVMLFA 596 Query: 540 AAADARHELKIFSYLASILCQHPAE--IIAGLTGYEAFMELL 579 +KIF S + P E + YE F++ + Sbjct: 597 INEGDERMIKIFFDWVSNVVNRPEELAKLVSSCTYEEFIDRI 638 >UniRef50_C7TGG8 Transcription regulator n=4 Tax=Lactobacillus RepID=C7TGG8_LACRL Length = 569 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 130/589 (22%), Positives = 236/589 (40%), Gaps = 32/589 (5%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 ML R++K++ L QQ + GELA+Q S RTI+RDI +N L + Y Sbjct: 1 MLLLREIKVLRRLSQQDFSGGELAKQLKASRRTIVRDIAAINTELQSSGIGMITTQNKYH 60 Query: 61 LEIFERRSFFQLLQKHDND-DRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRY 119 L I LL ++ + +L L ++ P A L + L T + + + L Y Sbjct: 61 LTILNPGRLMALLDTSRDEANEILLRLCISETIPMADLIAETYLSRTQIMDYISELNADY 120 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHR 179 ++SRPG+G I R+ + A+ + + P L+ D L L+ Sbjct: 121 ADIFRISSRPGMGMTIKMKRLTRIDIAADCIFEYPQLLDKVAPGTDRLPQLT-------- 172 Query: 180 WPLMQGDYLSSLILAIY------ALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTL 233 DYLS I R Q+ + P S DN V+T Sbjct: 173 ------DYLSENICPYQTWVIDSQWRAQVLAAFICSPSSGTLTAARQSNQI--DNFVKTR 224 Query: 234 TGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEH 293 L+ + S D + + + L I E++ H +R A P ++ Sbjct: 225 EALLMGLGK-----SRDKIVQMFSEIADDFQLEAIGQSTFESLFTHFVRECAFPRPLSVL 279 Query: 294 RQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIIL 353 + L A P AFD + L + DSD + LY A+ + + + I+ Sbjct: 280 SDYDIAKLSAQNPVAFDYAHVVALDLFKISHQVWLDSDFLALYIVQAVNQREAKPVRILF 339 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLII--NNSHYLLDDAVN 411 L+ + ++A IN I++ + N + + RSL E I ++ L I + +++ Sbjct: 340 LAPRMSLAQINATIIQQKLHNISLHMVRSLKEAETIFDQRHFDLAIANVRHDVVEHASIS 399 Query: 412 NYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQ 471 +T ++T I ++ + + R+ + + + G+ + + ++ Sbjct: 400 FVLTFSAVVTDQDIAALEQLVNGQYYRENIAAMLAP--NHFVGQITGDKFLTVLQKGLQN 457 Query: 472 LVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV 531 V + +A +II RE G L++N ++IPH + +R F I + + ++++ Sbjct: 458 FVRNDLLDRADAVKIIEREQAGNQLVLNHISIPHIVTNSVTDYRLFAIKPKEVITIDDQP 517 Query: 532 INHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLH 580 I ++I + IFSYL L ++ I + Y+ ++LL Sbjct: 518 IYLLVIVLVGTSQAEKNTIFSYLYQTLRRYVPADIEDVQDYQQVIKLLK 566 >UniRef50_C4FUH4 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUH4_9FIRM Length = 652 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 97/637 (15%), Positives = 198/637 (31%), Gaps = 69/637 (10%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 +N+RQ+ ++D L +Q ++AQ GVS +TI D+ LN L G Sbjct: 1 MNKRQMHMLDYLLKQTDYVASTQIAQLYGVSAKTIYHDLAKLNEALAPHGLAIDKSPRNG 60 Query: 59 YQLEIF--ERRSFFQLLQK------------HDNDDRLLALLLLNTF-TPRAQLASALNL 103 +L++ + L++ D + LL L L++ LA L + Sbjct: 61 VRLDLSQADEARLRSLIKDWQQAAQWEAYGPDDRERHLLKALCLDSGGLDLEDLAEQLYV 120 Query: 104 PETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGI 162 + L RL R++ L + G + E L L++ + + Sbjct: 121 SSVTLNRDLSRLGPRFQACGLTLVRQDGR-LQVQGRESAIRQCLRTYLQEWLYQMGEPIQ 179 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDYLSSL----------ILAIYALRNQLTDEWPQYPGD 212 H QH + Y I R QL + Sbjct: 180 DLVVFFHAEDITLCQHALNQLSQTYQHDFTADYYLLLLLECLIIRRRGQLGQVLQVRAKE 239 Query: 213 --------EIKQIVEHSGLFLGDNAVRTLTGL-------------IEKQHQQAQVISADN 251 E+ + A+ L+ + + Q + Sbjct: 240 LVRDLSHLEVYFFAGELLEAVTGQALVQLSAIEIESLAYTLLAVGFKIQSPDYERELRQQ 299 Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 VQ L+QRV ++++ D L+ + H+ + +++ ++ + F+ Sbjct: 300 VQALIQRVSDFLNVDLSQDQHLLAMLANHMSSMIFRLRHHMHVTNPALDEIRKQYLTLFN 359 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAI 368 + + E D+ + D + + ++F ALE+ Q +++ A + + + Sbjct: 360 IVWLVLRDFAEHYDMEVPDEELAFLVIHFQIALEKVQRPLTIVVVCQHGLAASELILAKL 419 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 +R ++ EL A + L+I++ + V + + Sbjct: 420 QRIFSPSDRLLNLKWQEL-ADMDWRGVDLVISSLDLKEELPVPVQRVSPIMTQDELEQIR 478 Query: 429 KHFLATAFIRQQPERFFSAPGSFHY------------SNVRGESWQHITRQICAQLVAQH 476 H+ Q + SFH + + + AQ Q+ Sbjct: 479 HHYDQLTSGHHQMVKALRRESSFHVASLAELIKTPDQVQLTANNQDQALELVLAQASPQN 538 Query: 477 HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL 536 Q + RE G + +A+PH + ++LA+PV + + Sbjct: 539 LANPAFVQSVYEREQMGATSVYTGVALPHSDPKTVTHSEIVLVSLAKPVSWGQNQVKLIF 598 Query: 537 IACAAADARHELKI-FSYLASILCQHP-AEIIAGLTG 571 + A K L +++ ++ Sbjct: 599 LIAVAERDMKLFKESLVALYALIEDQELMNQLSQCQD 635 >UniRef50_C5EFX5 Transcriptional antiterminator of lichenan operon n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFX5_9FIRM Length = 632 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 89/637 (13%), Positives = 206/637 (32%), Gaps = 61/637 (9%) Query: 1 MLNERQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 M + +++ LL+Q T +LA + GVS +T+ + L+ L S G Sbjct: 1 MDRVKLQELLVLLKQDEYRTASQLASRLGVSEKTVRTGLHELDRQLAENGGRVTSKARFG 60 Query: 59 YQLEIFERRSFFQLLQKH------------DNDDRLLALLLLNTFTPRAQLASALNLPET 106 Y LEI ++ F + + ++ L LL + QL + + +T Sbjct: 61 YHLEITDQDQFEKYQSETAVDGSIPDSGQARSEYLLAYLLFRREYVKIEQLCDFIYVSKT 120 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK------------D 153 ++ L ++ R + RP G I E L+++ K + Sbjct: 121 TLSHYLKSVEDILRRYRLSIERRPNYGIKIRGEEFDMRRLISDYFIKRHCLEGVDISHQE 180 Query: 154 PFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ----- 208 + LA R + + + Y++ + + P+ Sbjct: 181 EEMAALARQVRKLMANYEVHLSEISFENFVDYTYVAWKRMKAGYYLKMDRENLPEIGVKE 240 Query: 209 --YPGDEIKQIVEHSGLFLGDNAVRTLTGLI-----------EKQHQQAQVISADNVQGL 255 + + + + + G+ + L + + + + Sbjct: 241 QAFIQELLGILAKEKGISCTQDEENYLLLYLAGKRMIGNIVENDSNFVIHEQTDRLALEM 300 Query: 256 LQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 ++ V ++ + ++ + HL+ + + + +K + A+ MS Sbjct: 301 IRLVDHDFHMDFLKNFEMRMTLNQHLVPFDVRMRYDIPLKNPMLQEIKEKYSLAYQMSGV 360 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ--PIILLSDQNAIATINQLAIER 370 ++L+E + + + L F ALE+ ER+ +++ S + + + E+ Sbjct: 361 SCSVLKEYYHREIPEDEVGYFALIFELALEKGDLERRLDILVVCSTGKGTSRLLKYKYEQ 420 Query: 371 DVLNC--RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 + + + + ++ + + + V + I+++ Sbjct: 421 EFSEFLNSIYVCDLIGLESFDLSLVDYIFTTVPITMKVSVP---IVEVGMFLGTEDIQRV 477 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 L R++ S+V S + + + IC + Q + D ++ Sbjct: 478 TDVLRFGSNGDIIRRYYGPARFL--SHVPVGSKEDVLKYICDVIEKQELVDNDFYDLVLE 535 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAA--DARH 546 RE + N + +PH + L +P+ NN + +L+ D Sbjct: 536 RETYIQMDYGNMITLPHPNQIASEESFAYVAVLERPMVWNNLPVQVILLTSIGRKGDKEK 595 Query: 547 ELKIFSYLASI--LCQHPAEIIAGLTGYEAFMELLHK 581 E + F + L + + YE + L K Sbjct: 596 ERQRFYETTARFALSREAVSQLIQAPEYEVLVRQLKK 632 >UniRef50_C7TG26 PTS system, IIAB component n=2 Tax=Lactobacillus rhamnosus RepID=C7TG26_LACRL Length = 644 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 93/639 (14%), Positives = 201/639 (31%), Gaps = 64/639 (10%) Query: 2 LNERQLKIVDLLEQQ-PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGY 59 + +++L I++ L Q ++A TG+S RTI ++ L+ L + G Sbjct: 1 MKDKKLLILEFLLQHGTVHYDQIAAATGLSERTIGNYLNRLDGELRPYNVKLVRKRNVGI 60 Query: 60 QLEI--FERRSFFQLL--------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 +L+ ++ + + Q ++ LLL ++LA L + + Sbjct: 61 RLDGPADQKAHLLRSVHGQEGFASQSARVHYLMIKLLLTTRPCTLSKLADDLFVSRRTID 120 Query: 110 ERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD---- 165 +KQ + + G + +E R +LA LLR+ +D Sbjct: 121 NDFKVVKQIFAQNQVTVHTSRRGIQVTASEANRRHMLAKLLRQYWGESLYIAKQKDGEVV 180 Query: 166 -------NLQHLST----------ACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ 208 L HL + + L+ DY + + + + Q Sbjct: 181 QQIQLPHYLNHLVNPATTKAVMQSLTEFLKQSSLIFSDYALQSLAIHLIIACERPKK-EQ 239 Query: 209 YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQ--------------- 253 + ++ + L + L QQ A V Sbjct: 240 PTAIHLTPMLPETKQLLALVSKYVHQTLDAANAQQINAHIAALVDRQVSGAPAASIEDQT 299 Query: 254 --GLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDM 311 L +++ + D +L+E+++ HL L +K +P AFD Sbjct: 300 TPELRRQIASWLTQISPDKRLLEDLSVHLSGALVRVAHGMSIPNPYTEEIKRNFPMAFDA 359 Query: 312 SLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ--PIILLSDQNAIATINQLA 367 + + + + L D + + L+F ER Q + +++ S + + Sbjct: 360 AAQLSMTVAKHYHVQLNDDESGFLALHFESFFERQQVADRISTVVVCSSGVGTSRLLAQR 419 Query: 368 IERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQ 427 +E +++I R++ +R I LII+ + +TV ++ +E+ Sbjct: 420 LEERF-REKLVITRTIGLAELMRHAIPESLIISTV--PIQGMRQPVVTVNPLLLQHDVEK 476 Query: 428 IKHFLATAFIRQQPERFFSAPGS-FHYSNVRGESWQHITRQICAQLVAQHHITAD--EAQ 484 + + + F N+ + + +L + Sbjct: 477 VSQQADRFCFGTEGDAFLGLLEPALIVPNLPSTDRETALSTLIQRLTQAGVFEDASLPLK 536 Query: 485 RIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA 544 RE + +A+PH E RR ++ + + + A Sbjct: 537 LAEDREKLATTAMG-LVAMPHISPEMVRRPAIALGLAPDGLDWAGQKVKVIFFLAVTATV 595 Query: 545 RHELKIFSYLASILCQHPA--EIIAGLTGYEAFMELLHK 581 + + + + L E++A ++ L + Sbjct: 596 PGDQRGIYQVINRLIDDQRFCEVLAQSQSTTEAVKALAE 634 >UniRef50_B0M974 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M974_9FIRM Length = 652 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 111/652 (17%), Positives = 210/652 (32%), Gaps = 80/652 (12%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKA-RIFASGSAG 58 L RQ KI+ L ELA++ V+ RTI DI +N L I +S G Sbjct: 4 LPTRQKKILKKLMSLDGWVKGKELAEEMAVTPRTIRADIAAINVWLKTVGCYIESSRQEG 63 Query: 59 YQLEIFERRSFFQLL--------QKHDNDDRLLALLL---LNTFTPRAQLASALNLPETW 107 Y+L + LL + L LL +L + + T Sbjct: 64 YRLRGERQGELESLLWDGMDVPLTPQERMRALGIRLLQADEEKPEDVDELEEEMFVSRTT 123 Query: 108 VAERLPRLKQRYERTCC--LASRPGLGHFIDETEEKRVILLANLLRK--DPFLIPLAG-- 161 + + ++K E R G + EE R LL L+ DP + + Sbjct: 124 LESGIFKIKAMLESRTTPMYVKRNGRKIWTYGEEETRRFLLKELMVDRTDPDYLMIENYD 183 Query: 162 -------------------------ITRDNLQHLSTACDNQHRWPLMQGDYL--SSLILA 194 +T +++ HL + M +Y + IL Sbjct: 184 DYFGADIPEKMMNCVLNALADNEISMTAEDILHLVIYLSIKLTRVHMGYEYKNKTKDILT 243 Query: 195 IYALRNQLTDEW---------PQYPGDEIKQIVEHSGLF--LGDNAVRTLTGLIEKQHQQ 243 + L + + +E+ + LF +G A + E+ H + Sbjct: 244 SEDINWTLAETISGKVREEFSTELNEEELVDLAVQLSLFRLIGSEAEVRPAPIPEQSHYE 303 Query: 244 AQVISADNVQGLLQRVPGIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 V LL + L++ D +L + H+ L E + LK Sbjct: 304 F------VVNELLNDIKNKFHLDLTDDQELKAGLVTHIRYTLKRIRMEPESTNPVLMLLK 357 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP-----IILLS 355 +P FDMSL + + L +++ + Y A+ER + ++ P ++ Sbjct: 358 TEYPFVFDMSLFLYERFYDVFGVRLNENELGYVATYLGSAVERMERKKSPKDFTIAVVTG 417 Query: 356 DQNAIATINQLAIERDVLNC-RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYI 414 + + ++ + + S+ + I + LI S +L + I Sbjct: 418 MNYGTSRLLTTRLKAIYGDICNIEGPFSIYAVNEIEKLKPTFLITTESKQVLKNFQVPKI 477 Query: 415 TVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS-----FHYSNVRGESWQHITRQIC 469 + ++ +I +L ++ + + N++ E+ + + R + Sbjct: 478 QISPLLNEKDQREINKWLLQMRKELMYDQLPRSIKDYFHRELFFYNLKAETPEKVIRTMS 537 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 L+ D A++ + RE + N++A+PH +R L QP+ + Sbjct: 538 EHLIRLDFAGEDFAEKTLMREQVASTIFGNKIAMPHPIEACAKRTVISVGILNQPILWGS 597 Query: 530 EVINHVLIACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFMELL 579 + + + L F L L + G F + L Sbjct: 598 GQAQLIFMLAVKKEDMKYLNSFFDLTVRLVDDEGLVRKLLGSENLAQFKDRL 649 >UniRef50_Q67QV8 Transcription antiterminator BglG family n=1 Tax=Symbiobacterium thermophilum RepID=Q67QV8_SYMTH Length = 642 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 97/635 (15%), Positives = 203/635 (31%), Gaps = 56/635 (8%) Query: 1 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 M N+ L + ++ LA+ VS RTI + +N + + S GY+ Sbjct: 1 MGNKSDLIGILRRQEDWVPASTLARMLQVSTRTIRNYVVAINGGRDEP--LILSSYKGYR 58 Query: 61 LE-----IFERRSFFQLLQKHDNDDRLLALLLLNT-FTPRAQLASALNLPETWVAERLPR 114 I E L+ D + L+ + LA L + + + L + Sbjct: 59 YNRSAAVIPEPHRSRDDLKPEDRVSLIARRLVSSRGSVNFYDLAEELCVSDATLERDLTK 118 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD-------NL 167 +++ R I E ++ +++LL D + + Sbjct: 119 VREALRPFALKVFRESDQILIAGMERQKRKYISHLLSSDQQSVLSVALDEFFEGTVDRYT 178 Query: 168 QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGD--------------- 212 + A R+ + DY I+ + + + Sbjct: 179 EFERYARGLLKRFGIYADDYGFRNIVIHLVVTLERVANGESITENVPLSTLRDRKEYEVA 238 Query: 213 --EIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQ--VISADNVQGLLQ----------- 257 + + E+ G+ L D + + I + +I+ N++ ++ Sbjct: 239 LCIGEYVRENYGVVLTDAELYYVALTISTNSNLLKYKLITPTNIREYIEEKYILLAKMAL 298 Query: 258 -RVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 R+ L D V T H+ + + + + + K +P +DM++ Sbjct: 299 RRLEDTFYLEPFDDDFVIQFTIHIRNLIQRALTGSHVKNPLVGKFKTTYPLIYDMAVLVA 358 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQ---LAIERD 371 LRE I + D + I + LE+++ +R I L +++ I++ Sbjct: 359 NQLREIEGIHVPDDEIVFIAFHIGAYLEQNKADRGRINTLFVYADYHNMHEPVLTKIQQA 418 Query: 372 V-LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 + + ++ A + E + + ++ + V I + Sbjct: 419 LDQDLNIVAAVPVREFAFAPYDCQLIISTVPETVVEGLPVVYVNVFPTEADLKVIRRKIE 478 Query: 431 FLA--TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 + + A + NV E + R + + Q ++ Sbjct: 479 EIRLDMRAASVRDHIQRFAVPALFRRNVYAEDEFAMIRILTQECAHLGLCPPSFEQEVLD 538 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE N++AIPH R + +P+ N + +++ D R+ Sbjct: 539 REAMSSTAFPNQVAIPHSLQHSATRSFLSIVVNERPMRWGNFDVRIIILIGVCKDDRNTF 598 Query: 549 K-IFSYLASILCQHPA-EIIAGLTGYEAFMELLHK 581 + FS L S+LC A + YEAF++ L + Sbjct: 599 QEFFSDLVSVLCNEIATRQLIQCDSYEAFLQTLTR 633 >UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MET8_9FIRM Length = 671 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 102/648 (15%), Positives = 222/648 (34%), Gaps = 70/648 (10%) Query: 3 NERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAGY 59 N+R +KI+ + T +A GVS RT+ DI LN L + S GY Sbjct: 13 NKRLIKILRFFLENEKWITGASIALSVGVSTRTVRNDIKELNQMLADRGAEITSEIGQGY 72 Query: 60 QLEIFERRSFFQLLQKHDNDD-------------------RLLALLLLN----TFTPRAQ 96 +L + + R F L ++ ++ + LLL + Sbjct: 73 KLTVSDSRKFDLLKKEIRKEESSKPFQNIIPSDSEERVHYIISRLLLNSLNSGERIDFFD 132 Query: 97 LASALNLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPF 155 L L + + + + L + ++ + G + E K ++ + Sbjct: 133 LEEELFVSTSTLKKDLRTIDGILKKHDLRIRDTKKEGMRVAGQETKIRFCISEYIFNSQK 192 Query: 156 L-------IPLAGITRDNLQHLSTACDN---QHRWPLMQGDYLSSLILAIYALRNQLTDE 205 + D +++L L + + L+ ++ L+ Sbjct: 193 DTGDIGNKFYKDMFSSDEVENLRIILMEAITDFNLRLTDIAFRNLLVHSLIMLKRFEKKR 252 Query: 206 WPQYPGDEIK----------------QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA 249 +Y +EI+ +I G+ LGD LI Q + + Sbjct: 253 HVKYDEEEIELFSGTKEFRCAQQIITEISGKLGISLGDEVYYLTQHLISSQRFLIENLDG 312 Query: 250 D-----NVQGLLQRVPGIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKA 303 D ++ +L + +++ D QL+ + HL L + R ++++K Sbjct: 313 DYEYKEEIEDILNTIRSGTGIDLSDDNQLINGLAMHLSAALQRLRFDMNIRNEFLDSIKN 372 Query: 304 AWPAAFDMSLHFITLLREQ--LDIPLFDSDLIGLYFACALERH-----QNERQPIILLSD 356 +P AF++++ ++ ++ L + + ++F ALER Q ++ +++ Sbjct: 373 LYPLAFELAVVAGEVIEKKHKLKAKESEIGFLAMHFGAALERKGLNRKQEPKKVVLVCIA 432 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 A A + + ++ + I +S E I+ ++ + L D + Sbjct: 433 GIATALLLKEKLQHKFGQ-YIEIVKSCPVQDVDEELIDGADLVLTTVELPDFQSEKIKKI 491 Query: 417 KNIITAAGIEQIKHFLATAFIR-QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 K + + + + + + + + ++++ + Q I + +V + Sbjct: 492 KLFLDDDDLNHLATVITDSGNQMKVIDYSSIFREDLFFTDMEFKDKQEILEFMTDAMVEK 551 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 +I + Q I RE + + +AIPH + + L +PV NE + V Sbjct: 552 GYINQEIKQSIFKREEMSTTELGSLVAIPHALFNDMQEAAVSVMVLKKPVIWENEKVQVV 611 Query: 536 LIACAAADARHELK-IFSYLASILC-QHPAEIIAGLTGYEAFMELLHK 581 L+ + +F L L + Y F++ L + Sbjct: 612 LMLNIPQSKYDVWEVVFKNLYQFLIGNSGVAKLVRHPCYGQFIKDLLE 659 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 83/300 (27%), Gaps = 24/300 (8%) Query: 64 FERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE-RT 122 + L L + A +A ++ + V + L Q R Sbjct: 2 NNKEEETMERYNKRLIKILRFFLENEKWITGASIALSVGVSTRTVRNDIKELNQMLADRG 61 Query: 123 CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT-RDNLQHLSTACDNQHRWP 181 + S G G+ + ++ ++ LL +RK+ P I D+ + + Sbjct: 62 AEITSEIGQGYKLTVSDSRKFDLLKKEIRKEESSKPFQNIIPSDSEERVHYIISRLLLNS 121 Query: 182 LMQGDYLS--SLILAIYALRNQLTDEWPQY-------------PGDEIKQIVEHSGLFLG 226 L G+ + L ++ + L + E ++ Sbjct: 122 LNSGERIDFFDLEEELFVSTSTLKKDLRTIDGILKKHDLRIRDTKKEGMRVAGQETKIRF 181 Query: 227 DNAVRTLTGLIEK----QHQQAQVISADNVQGL-LQRVPGIASLNII-DAQLVENITGHL 280 + + + S+D V+ L + + I N+ N+ H Sbjct: 182 CISEYIFNSQKDTGDIGNKFYKDMFSSDEVENLRIILMEAITDFNLRLTDIAFRNLLVHS 241 Query: 281 LRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPL-FDSDLIGLYFAC 339 L L + + F + IT + +L I L + + + Sbjct: 242 LIMLKRFEKKRHVKYDEEEIELFSGTKEFRCAQQIITEISGKLGISLGDEVYYLTQHLIS 301 >UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus RepID=Q5KYD3_GEOKA Length = 684 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 98/683 (14%), Positives = 206/683 (30%), Gaps = 105/683 (15%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GS 56 MLN R +++V LL + T +LAQ VS RTI DI N L + Sbjct: 1 MLNARCIQLVKLLLRSSLYLTADKLAQSLNVSKRTIYYDIQKTNEWLRHEGLKPIQYARG 60 Query: 57 AGYQLEIF------------ERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLP 104 G++L+ + + L +L L + Sbjct: 61 LGFRLDDEVKQEITTKWNTLQPARHYTYQSWERKAWIGLWILTRVHPLYLCDFLEKLQVS 120 Query: 105 ETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT 163 + + + LK+ ++ L+ G+F E ++ L+ + + + Sbjct: 121 RSTLLNDIKELKEDWQSFQLQLSFHRKKGYFSSGEEIQKRKLMIRYIHQILAAMDDQHFA 180 Query: 164 RDNLQH-----LSTACDNQHRWPLMQGDYLSSLILAIYALRNQL----------TDEWPQ 208 + C + + + + + AL + E Sbjct: 181 AELSAECQWPIFDWICQFESTFSIRYTGEVIQTLPIYLALFQRRWARGKFVQMDEQEKEV 240 Query: 209 YPGDEIKQIVEH--------SGLFLGDNAVRTLTGLIEK---------QHQQAQVISADN 251 QI +H S + + D+ V LT + Sbjct: 241 LRSMREYQIADHLVRRIENVSQISIPDDEVCYLTTHLLSFRVADDKQMDQNDDITTLKRI 300 Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 ++ ++ A + +L +N+ H+ + + ++KA + F Sbjct: 301 IRHMVDDFQTYACVQFKRREELEKNLLVHMKPAYYRLKYGFHLQNDLTESVKANYQDLFT 360 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALER----HQNERQPIILLSDQNAIATIN 364 ++ + L + P+ D + I ++F L+R ++ +I+ + + Sbjct: 361 LTKKVVHHLESVVGQPVSDDEIAYIAMHFGGWLDREGVSVPVRKKVLIVCESGIGTSRML 420 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 Q + + VI S E I ++ + D TV+ I+T Sbjct: 421 QKQLGELLSTVDVIGVVSAREYDYISLAGHVDFVVTTTPLQPKD--VPVYTVRPILTTED 478 Query: 425 I-------------------------EQIKHFLATAFIRQQPERFFSAPGSF-------- 451 ++ + + Q+ +FS Sbjct: 479 KMLLLREIEGWTETTSLDLEVVMDIIKKHATVIDEKTLYQELNAYFSHSKRKEIWPKPML 538 Query: 452 --------HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE-GEGEN-LIVNRL 501 W+ L+ + +IT++ + +I G +I + Sbjct: 539 KDLLTKRHIQIIEEAGDWKEAIVLAARPLLEEGYITSEYIEAMIQNVLTLGPYIVITPGV 598 Query: 502 AIPHCWSE-QERRFRGFFITLAQPVEVNNEVIN--HVLIACAAADARHELKIFSYLASIL 558 A+PH E ++ F+ + + ++ + +VLI AA D LK S L ++L Sbjct: 599 ALPHARPEQGAKKLGMSFLRIKKGCLFSDREEDRVYVLIVLAAIDHETHLKALSQLTTLL 658 Query: 559 CQHP-AEIIAGLTGYEAFMELLH 580 +++ E + L+ Sbjct: 659 SNQEHIQMLFKAESVEEVLALVE 681 >UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ5_9ACTN Length = 616 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 93/605 (15%), Positives = 181/605 (29%), Gaps = 87/605 (14%) Query: 56 SAGYQLEIFERRSFFQLLQK-------------HDNDDRLLALLLLNTFTPRAQLASALN 102 GY LEI + ++ L+ L LL+ N + LA A Sbjct: 15 GGGYFLEIADEGAYRALMHSSPSLVHGVPATRAERVVYLLNDLLMRNDWVFADDLADACA 74 Query: 103 LPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILL--------------- 146 + ++ L +++ R L RP G + E R + L Sbjct: 75 CSRSTLSLDLRDVERILNRYDLVLERRPRYGMRVSGLELNRRLCLAASAMGDATCLLGGI 134 Query: 147 -----------ANLLRKD----PFLIPLAGITRD----------------NLQHLSTACD 175 +L ++ L +A D L H++ A Sbjct: 135 GDAAPAPSSAPESLFQRMGMQRESLEVIAASVEDALTDGPININAISYQNLLVHIAIALV 194 Query: 176 NQH---RWPLMQGDYLSSLILAIYALRNQLTDEWP-----QYPGDEIKQIVEHSGLFLGD 227 + PL D + YA ++ + P +E+ I H Sbjct: 195 RINAGCYVPLASEDMSDIERRSEYAAARRVAGGIKSRLGMELPEEEVAYIAIHLAGKRTL 254 Query: 228 NAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAA 286 N L+ + V +L V + D +L N+ HL+ Sbjct: 255 NDA--LSNEEPEGGLVISDEIWALVSDMLDSVRTHFHFDFDEDIELRMNLARHLVPLAVR 312 Query: 287 PVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH 344 + + ++ +P A+ M++ +L + + + I + FA ALER Sbjct: 313 LRSQMNLKNPLLGDITTHYPLAWSMAVDACEVLHREFGTAPSNDEIGYIAMAFALALERQ 372 Query: 345 QNE---RQPIILLSDQNAIATINQLAIERDVLN--CRVIIARSLSELVAIREEIEPLLII 399 +++ ++ +++ + A + + +++ + + + I+ + Sbjct: 373 RSQAPRKRLLVVCASGAGSARLLKCRCQKEFGSYVESIETCDVMHVADVDFSRIDYVFTT 432 Query: 400 NNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGE 459 L V V A ++I+ L F + + ++R Sbjct: 433 VPISAKLPVPVR---EVPFFFDDAAADEIRDLLR--FGDKGCIVAGHFDPELFFPHMRLT 487 Query: 460 SWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFI 519 S + +CA + + + RE N +A+PH Sbjct: 488 SKDEVLHFLCAAVRDGRSGYEELEPLVFEREAAATTSFGNMVAMPHPLESVSDDTVVAVA 547 Query: 520 TLAQPVEVN--NEVINHVLIACAAADARHELKIF-SYLASIL-CQHPAEIIAGLTGYEAF 575 L QPV + + V + C + EL F S LA + + + + Sbjct: 548 LLDQPVVWDEIGTCVRAVFLICFSRIGGPELDAFLSALADVFTDEEAISRLIEHQDWSTL 607 Query: 576 MELLH 580 MEL Sbjct: 608 MELFQ 612 >UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR family n=3 Tax=Thermoanaerobacter RepID=C6PFK2_9THEO Length = 651 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 96/652 (14%), Positives = 238/652 (36%), Gaps = 74/652 (11%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SA 57 MLN R+ KI+ L++ +P T L+ TGV+ RT+ +DI+ L L+ + Sbjct: 1 MLNSREKKILIALKEAKKPLTISNLSAITGVTTRTVKKDIEILKQKLDRNKVEIITKPGV 60 Query: 58 GYQLE-----------IFERRSFFQLLQKHDNDDRLLALLLL-NTFTPRAQLASALNLPE 105 G +E ++ + D + LL N + L + + Sbjct: 61 GVWIEEKVDDEYLENVLYSSNKIINPIFPDDRVYYIAKRLLETNNLMTLEDFSVELYVSK 120 Query: 106 TWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRK---------DPF 155 + VA+ + ++++ + L +P G + E+ + A +L+ + Sbjct: 121 STVAKDILKVEEFLGKYGIKLYKKPKHGIKVIGDEKSIRLANAEILKNVTTKHDEIINDS 180 Query: 156 LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWP-------- 207 L L N + ++ L++ + +L + Sbjct: 181 LKDLLKDVDLNAIQRIIQGSEEKFNYILSDVSFKGLLIHLAISIKRLWEGKKVTLDLKDL 240 Query: 208 ---------QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQR 258 + D K I + + + D + +T + Q + + + L+R Sbjct: 241 NLLKKEKEWEIAKDLAKNIEKRFNVVVDDTEIGYITMHLMGAKLQNDIETEKFSENYLKR 300 Query: 259 VPGIASLNI----------------IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 + + + D +L+ + HL + + + +K Sbjct: 301 LDCKLYIILKSIVNDIAEMTGYKFYNDKKLLVGLFLHLKPTINRLKNGVKLDNPFLEEIK 360 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ----NERQPIILLSD 356 AF++S+ F L+E I + + + + ++F ++ER + N++ +I+ + Sbjct: 361 KECGIAFEISISFWEKLKEFYKINVNEDEIGYVAIHFGASIERLKSVDRNKKTAVIVCAT 420 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 A + + + N +I + + ++ +++ P ++++ + ++AV I V Sbjct: 421 GIGTAQLLTARLTKLFPNIELIKVLPVIKAKSMLKDLSPDIVLSTVPFETEEAV--VINV 478 Query: 417 KNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFH-----YSNVRGESWQHITRQICAQ 471 + +++I+ + I + ++ S ++ + ++ + + ++ + Sbjct: 479 SPFLDEEDVDKIERIVKNKKIDTEVKKIKSKILNYISEDLVFLKIKAKDKFEVLFKMSQR 538 Query: 472 LVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNE 530 L+A +++ + ++ R+ + N +AIPH + + TL P++ +++ Sbjct: 539 LLALNYVKEGFYESVLQRDSFSSTAVGNLVAIPHPYEGFVNLPKISVATLKSPIKWDDDK 598 Query: 531 VINHVLIACAAADARHELK-IFSYLASILCQHP-AEIIAGLTGYEAFMELLH 580 + V + + E K IF LA + + Y F+E Sbjct: 599 KVQIVFMIALDLSIKEEFKNIFDELAEAINDKEKILKLVDCKDYREFIETFK 650 >UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D94 Length = 696 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 103/705 (14%), Positives = 205/705 (29%), Gaps = 141/705 (20%) Query: 9 IVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GSAGYQLEIF 64 ++ LL + + EL Q+ G+S RT+ D++ +N L +AGY L Sbjct: 1 MLTLLHEAADYVSLEELMQKLGISRRTVYYDMEKINDWLKAVQLPSVQYVRTAGYYLPEE 60 Query: 65 ERRSFFQLLQK-------HDNDDRL----LALLLLNTFTPRAQLASALNLPETWVAERLP 113 R QL +K +RL L LL + L L + V + L Sbjct: 61 SRAGLPQLNEKPHAQQYYLSPRERLAWMSLYLLSAESPLFVHHLTELLQVSRGTVLKDLN 120 Query: 114 RLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLL---------------------- 150 ++ + + G+ + E + L++ Sbjct: 121 MVRSEMKSVKLKVTYDRKRGYGVQGEERDKRKTLSHYFGQIFGHAGWEQAFNLNPESGVP 180 Query: 151 ---------------------RKDPFLIPLAGITRDNLQHLS----TACDNQHRWPLMQG 185 D + +T + L HL+ + Sbjct: 181 DLAPLLFPPMEEGGLEQVYRLISDSEITLGVDLTDEMLFHLTARFLLYVRRIQTAQWVSI 240 Query: 186 DYLSSLIL---AIYALRNQLTDEW-----PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLI 237 D +L Y ++ + P DE+ H L V + + Sbjct: 241 DDDERSVLRRTPEYEAAARIAEGLGQMFGVSVPDDEVCYFAMH----LLGARVNRMEQMT 296 Query: 238 EKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQS 296 + Q+ + + A + + + + + EN+ HL ++ Sbjct: 297 GSEEVLKQLRNVTT--EMTDHFQRYACVFLPNREAMEENLLVHLKPAYYRILYGLSLENP 354 Query: 297 SMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE----RQP 350 + N+++ + F+++ + + L D + + ++F L R + RQ Sbjct: 355 LLENIRSKYGEVFELTRRSAAPFEQLVGRKLDDHEIGYLAMHFGGWLRRENTKPAVRRQA 414 Query: 351 IILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAV 410 I+ + + + + + +E + SL + + REE + I + Sbjct: 415 AIVCVNGISASRMLKSQLENLFSAVDITAVLSLRDYESFREE-DVDFIFSTVPLPDSK-- 471 Query: 411 NNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFS------------------------ 446 + V I++ E + + + R+ + + Sbjct: 472 VPVLLVNPILSDKDKEHLLNQINMVSGRKSRTQANTVQALLDIVHKYAAVRDEAGLAEEL 531 Query: 447 ----------------------APGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ 484 N W+ R+ L+ I Sbjct: 532 NRYMSLGKTWLSEARKPSLTDLLTEQMIRMNREAADWRSAIREASEPLLKDGRIEEAYID 591 Query: 485 RII-AREGEGENLIV-NRLAIPHCWS-EQERRFRGFFITLAQPVEVNNE---VINHVLIA 538 +I E G ++V +AI H + RR + L QPV + E + +L+ Sbjct: 592 AMISKVEALGPYIVVAPGIAIAHGKPQDGVRRLGISLLRLEQPVAFSEEARHQVQIILVL 651 Query: 539 CAAADARHELKIFSYLASILCQHPA-EIIAGLTGYEAFMELLHKG 582 A D LK S L +L + E ++ L G Sbjct: 652 AA-IDGESHLKALSELTLLLRDKENLIRLKEARTKEQILQQLLTG 695 >UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR family n=5 Tax=Geobacillus RepID=C9RTD1_GEOSY Length = 696 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 105/680 (15%), Positives = 214/680 (31%), Gaps = 105/680 (15%) Query: 3 NERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAGY 59 + R+ K+++ L + T GELA++ VS RT+ RD+ + L A G Sbjct: 4 SARERKLLERLLADDRDITVGELAEELNVSARTVHRDLQGIESVLRRYGLGLAKKAGIGI 63 Query: 60 QLEIFERRS-----------FFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 +L E + + +ALL N LA+ LN+ V Sbjct: 64 RLVGEEENKQALAAELFRLSHHEYTPEERQLMIFIALLEANEPVKLVSLATDLNVTVATV 123 Query: 109 AERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 + L +++Q E L + G G + +E + L+++LL + + ++ + Sbjct: 124 SLDLDKVEQTVEAYGLSLIRKRGYGVELAGSESAKRRLMSDLLFRHVDEHEFLALMKETI 183 Query: 168 ---------------------QHLSTACDNQHRWPLM------QGDYLSSLILAIYALRN 200 + LS R Y++ ++ A+ Sbjct: 184 QKRADAPLDTVAEKLLGLVDRKKLSIIEQQIERVKEKLPFTMADSSYIAFVVHLALAIER 243 Query: 201 QLTDEWPQY-----------PGDEIKQIVEHSGL------FLGDNAVRTLTGLIEKQHQQ 243 E + EI +++ S + L+ + + Sbjct: 244 IKQGEAIHFDPRDLQALQATKEYEIARVLAESLERAFGIDIPNEEVGYMTMHLMGAKWRS 303 Query: 244 AQ--------VISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHR 294 Q + Q L++ V +++ D L E++ HL L Sbjct: 304 RQGAMMEEPSLAVGMKAQQLIRFVSDKLGVDLSTDRTLYEDLVVHLKPALYRLEHGMGVA 363 Query: 295 QSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILL 354 ++ +K + F + L + +P + + L+FA AL R + + +++ Sbjct: 364 NPLLDQIKQDYAELFAIVADGARQLFGDIPVPDEEIGYLVLHFAAALMREKKGWRVLVIC 423 Query: 355 SDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYI 414 S A + +++++ + + S E L+I L + +I Sbjct: 424 SSGLGTAKMLATRLKKEIPDIVSLEQASAFEWRGKDVSAYDLVIST---VPLPEEYGPHI 480 Query: 415 TVKNIITAAGIEQIKHFLATAFIRQQPERFF------------------------SAPGS 450 V ++T +I+ L ++ Sbjct: 481 VVSPMLTEEEARKIRECLERKSAAEKRMEREPTAQRNRPALDIMKAVRRISETIVHILDG 540 Query: 451 FHYSNVRGESWQHITRQICAQLVAQHHITADE--AQRIIAREGEGENLI-VNRLAIPHCW 507 F + V S + + C +L I + + + RE G + LA+ H Sbjct: 541 FSLAAVTHRSVRELLADACRRLERNGFIVDADVVIEELRRRESLGGLGVPGTTLALYHAR 600 Query: 508 SEQERRFRGFFITLAQPVE---VNNEVINH---VLIACAAADARHELKIFSYLASIL-CQ 560 S R L P ++ E + VL+ A L + S+++++L Sbjct: 601 SFAVLRPSLTMYRLDSPQTVAGMDGEPMEINTVVLLLGPADADEEMLSVLSHVSTLLVKD 660 Query: 561 HPAEIIAGLTGYEAFMELLH 580 + G + L+ Sbjct: 661 EQSAATLAYGGEDEVYSLIS 680 >UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFS9_9FIRM Length = 643 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 88/632 (13%), Positives = 205/632 (32%), Gaps = 70/632 (11%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNG-KARIFASGSAG 58 + R++K+++LL + T ELA+ VS +TI +DI + L + + + G Sbjct: 1 MLLREMKLLELLAKDDRVYTTVELAKMLHVSTKTIKKDIKNIKEELKTPECHLHSQAGKG 60 Query: 59 YQLEIFERRS--FFQLLQ----------KHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 L ++ + LL ++ LL LL ++ +A L + + Sbjct: 61 VWLTCSDQGNVFIKSLLSDIRPICSDAPENRKYHVLLKLLQAPSYLSMESIADTLYVSKG 120 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRK------DPFLIPL 159 V + + E+ + + G + E + I ++ K + L L Sbjct: 121 TVVNDVNEIIPFVEKQGLTMEKKAKYGVRVLGKESRIRIAECAVISKLVRLQGNGLLTKL 180 Query: 160 AGITRD-NLQHLSTACD--NQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQ 216 + +LQ + T + +++++ ++ + P + Sbjct: 181 VPFFEETDLQEIHTILHDMEDDYGFTFADSSYAEMMISLAITVERVRNGNVCCPTEGELN 240 Query: 217 IVEHSGLFL--------GDNAVRTLTGLIEKQHQQAQVISADN----------------- 251 + + + E+ + ++ A Sbjct: 241 GYRQKNQWSMAGHMARKLEQEFHIVMDEGEQAYITMNLMGAKLQNRPMENKAVISGVRDI 300 Query: 252 --VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 + +++ + +I+ D L + HL +K Sbjct: 301 QKLDEIMKAAGDVFHEDILGDQLLRNTLYMHLEGMFNRLNHQMHLDNPIKQMVKDELAYE 360 Query: 309 FDMSLHFITLLREQLDIPLFDSDL--IGLYFACALERHQNE-----RQPIILLSDQNAIA 361 F+++ + L+ EQ L D ++ I LY + ER + +I + Sbjct: 361 FEIATYIAGLIAEQFGTGLGDDEICDIALYLGASFERRKISDVLVAPTVVIACGTGMGTS 420 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + ++R + + +S + + E+ +I+ LD N I V ++ Sbjct: 421 LFFEARLKRVFPDITIRRVLPVSRIREVLEQETLDCVISTVPLALDG--INVIQVSPVLN 478 Query: 422 AAGIEQIKHFLATAFIRQQPERFF-------SAPGSFHYSNVRGESWQHITRQICAQLVA 474 IE ++ L + N ++ + + + +++ Sbjct: 479 DKDIEVLRKALYPGKNEKMASSGNSYPNLWAMLNEKITILNCDCKTAEEVIVLLGQRMIQ 538 Query: 475 QHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINH 534 + ++ + + ++ RE I AIPH + + +TL +PV E + Sbjct: 539 EKYVDSGFIESVLKREKLAPTSIGGMFAIPHAFEGHVIKQGIGLMTLRKPVIWGEERVQI 598 Query: 535 VLIACAAADARHELK-IFSYLASILCQHPAEI 565 +L+ ++ +L+ IF LA + Sbjct: 599 ILMLSVDVNSTSKLRIIFEELADLTKDTAVVR 630 >UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotransferase n=2 Tax=Selenomonas RepID=C4V3X4_9FIRM Length = 644 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 108/632 (17%), Positives = 216/632 (34%), Gaps = 61/632 (9%) Query: 4 ERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQ 60 ER +I+++L P T LA+ VS RTI DI L L+ + GY+ Sbjct: 10 ERCRQILEVLINNPEGMTGETLAKHFDVSSRTIRSDIKMLQTQLSNCRTEILAAPKRGYR 69 Query: 61 L-----------EIFERRSFFQLLQKHDNDDRLLALLLL----NTFTPRAQLASALNLPE 105 + + + L++ D + +++ L N + LA + + Sbjct: 70 IVQEESTADLVKLVDDESGQVGLIRTEDQQNYIISRFLECCLKNVSVTQMMLADEMYVGL 129 Query: 106 TWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF----LIPLA 160 + + L ++ + + G I+ E + L + I Sbjct: 130 STIKSYLNSTRKHFDAYNIHIVQYKTEGLRIEAAEGTLRSFFVDYLHEVQDKKLCHILFE 189 Query: 161 GITRDNLQHLSTACDNQHRWPLMQ---GDYLSSLILAIYA------------LRNQLTDE 205 IT D ++ + + N R L D L+I + +L D Sbjct: 190 RITYDQMEEILSQAGNVRRLQLTDSARHDLAVQTALSIQRSLTGHGIECSSSMAQKLEDT 249 Query: 206 WPQYPGDEIKQIVE--------HSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQ 257 + EI + +S +F + T L++ + V+ +L Sbjct: 250 FEYSAAKEILNKILNSIGVDIPYSEVFYLTQCLLTGKKLLDAGSGVNDEHVKELVEKVLV 309 Query: 258 RVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 V L+ D L + + HL +A + R ++++K +P AF ++++ Sbjct: 310 DVDKKFGLDFTADEYLKDGLALHLRIAIARVNFHVNIRNELLSSVKQDYPLAFQIAVYAA 369 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIE 369 L+R+ I +++ I L+F A+ R+ + + ++ S ++ + + ++ Sbjct: 370 KLVRDIDHIEFNENEIGYIALHFCAAMSRNSIAEEEQPKNVYVVCSAGLGVSVLMKAKLK 429 Query: 370 RDV-LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 + VI +L +E +I L + I V +++ IE+I Sbjct: 430 EHFRSSIHVIDILPAYKLTEKMQEEADYIIST---VPLPSNSSKIIRVNHMLRTDDIEKI 486 Query: 429 KHFLATAFIR-QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 + L Y + + + + V + A+ + Sbjct: 487 RRILFKQASTLDANVVRQFFRPEGFYVDQLFHTRDECLNFLTDEAVRNGWMDAEGKSSVF 546 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE 547 RE I + +AIPH + + L +PV+ + + V + Sbjct: 547 EREHMSSTAIGDFVAIPHALLTEHMISNISVLILKEPVQWEDFPVRVVFLLNIEQSKASL 606 Query: 548 -LKIFSYLASILCQ-HPAEIIAGLTGYEAFME 577 K+F L S + + H E + YE FME Sbjct: 607 WEKMFLKLYSFIKEYHGLESLLKHKSYEQFME 638 Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 31/277 (11%), Positives = 86/277 (31%), Gaps = 18/277 (6%) Query: 73 LQKHDNDDRLLALLLLN-TFTPRAQLASALNLPETWVAERLPRLKQRYER-TCCLASRPG 130 +QK + ++L +L+ N LA ++ + + L+ + + + P Sbjct: 6 MQKQERCRQILEVLINNPEGMTGETLAKHFDVSSRTIRSDIKMLQTQLSNCRTEILAAPK 65 Query: 131 LGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYL-S 189 G+ I + E L L+ + + L +S + + + L Sbjct: 66 RGYRIVQEESTA--DLVKLVDDESGQVGLIRTEDQQNYIISRFLECCLKNVSVTQMMLAD 123 Query: 190 SLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ--------- 240 + + + +++ L + I + + + A TL Sbjct: 124 EMYVGLSTIKSYLNSTRKHFDAYNIHIVQYKTEGLRIEAAEGTLRSFFVDYLHEVQDKKL 183 Query: 241 -HQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMN 299 H + I+ D ++ +L + + L + D+ ++ + + SS Sbjct: 184 CHILFERITYDQMEEILSQAGNVRRLQLTDSA-RHDLAVQTALSIQRSLTGHGIECSSSM 242 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIPLF--DSDLIG 334 K + + + + + + + + + Sbjct: 243 AQKLEDTFEYSAAKEILNKILNSIGVDIPYSEVFYLT 279 >UniRef50_Q724A6 PRD/PTS system IIA 2 domain protein n=29 Tax=Listeria RepID=Q724A6_LISMF Length = 623 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 112/616 (18%), Positives = 226/616 (36%), Gaps = 42/616 (6%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ++ERQ +++ L Q+ T L++ GVS +T+ DI +N + + I + GY Sbjct: 3 ISERQRSLLEKLNDSQKTVTAKALSEMLGVSSKTVRNDIVQINQSFSST-IIASKAGKGY 61 Query: 60 QLEIFERRSFFQLLQKHDN-DDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQR 118 L E+ S L + +N LL ++ T LA + E+ +A + L Sbjct: 62 FLTPNEQLSQINLTKNSENLHFELLRHIIEQDHTNFYDLADQFFISESTLARIIKELNAV 121 Query: 119 YER---TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD-----NLQHL 170 + C+ + EEKR I L ++ D NL+ L Sbjct: 122 IAEKDESLCIIRKNNELLTEGGEEEKRRIFNLFLNQEIENHQLSLDKYADYFDYCNLKQL 181 Query: 171 STACDNQHRWPLMQGDYLSSL--ILAIYALRNQLT--------------DEWPQYPGDEI 214 S H+ + S++ IL I L +++ + Sbjct: 182 SELIIAYHKKNDFFMNDFSTISFILHIAVLIERISMGSYIQRTALTEQDKTSLEMAEHLA 241 Query: 215 KQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN----VQGLLQRVPGIASLNII-D 269 + + + + + + L + I A V LL+ V ++ D Sbjct: 242 ETLENELQINIPTQELSYIARLYSGKLTTTSTIDAQVFGSVVTRLLEAVDQNFHIDFSAD 301 Query: 270 AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFD 329 ++ + H+ LK +P +++S++ ++++L I D Sbjct: 302 EKIATYLVAHISALYKRANHKQYLTNPLTEELKNKFPFIYNVSVYASAFIQKELAITFPD 361 Query: 330 SD--LIGLYFACALER-HQNERQPIILLSDQNAIATINQLAIERDV--LNCRVIIARSLS 384 + I L+F A E + +++ I+L+S A + + + + +++++S+ Sbjct: 362 DEIAYIALHFLSASETINHGKKRKILLVSPYGAGSQRLIHNQLKKIADFSIDLLVSQSIF 421 Query: 385 ELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERF 444 ++ + E LII L ++T +++IKH L T R Sbjct: 422 DIKQFTLDKEIHLIITAEPLNLT-TDIPVYHYDLLLTETDLQKIKHILETKPKADSISRK 480 Query: 445 FSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIP 504 F + +S + + +C QL A + +D ++ RE N AIP Sbjct: 481 FFK-KELFFPKQNFKSKEEVITFLCEQLTAFDYCDSDYVSKVFEREQLSSTCYGNYYAIP 539 Query: 505 HCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL-KIFSYLASILCQHP- 562 H ++ L +P++ + VL+ + + ++F L +IL + Sbjct: 540 HAIQRSAKKNAVAVCALDKPIDWGGNRVKLVLLLTMKEERDNSFEELFGQLVTILNERSF 599 Query: 563 AEIIAGLTGYEAFMEL 578 + +A ++ F+EL Sbjct: 600 VKKLAKQEDFQQFIEL 615 >UniRef50_UPI000196A9D7 hypothetical protein CATMIT_00535 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196A9D7 Length = 624 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 103/623 (16%), Positives = 208/623 (33%), Gaps = 46/623 (7%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +N RQ +I+D+L + T ELA VS RTI DI+++N I A+ GY Sbjct: 1 MNNRQQRIIDILYDYDEWVTGKELASMLSVSDRTIRSDIEHINKEYECT-LIEANRRKGY 59 Query: 60 QLEIF------ERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLP 113 L+ + ++ LL +L + + + L Sbjct: 60 HLDEMLTSVKGITTKSVIPQTSQERVSWIIKELLFKQEINLIELQDRIYVSGYTIDNDLR 119 Query: 114 RLKQRYERTCCL-ASRPGLGHFIDETEEKRVILLANLLR-----------------KDPF 155 +++ L R ++ E ++ + +LL KD Sbjct: 120 NIRRILNEYPSLKVVRVKNHIRLEGNENEKRSVYKHLLESEIKGNFTNISALSHLWKDFN 179 Query: 156 LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYL------SSLILAIYALRNQLTDEWPQY 209 LI + I ++ + N LM + + L D + Sbjct: 180 LIDVVEIFKNVCANNHYKFKNVSLPMLMMHAGIAIERIRNKNYLYETQSDCTGIDLEYRV 239 Query: 210 PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ--HQQAQVISADNVQGLLQRVPGIASLNI 267 D +++ + G+ + V L+E + H + S V+ +L + ++ Sbjct: 240 SKDFFEELSQKLGIPYVEEEVVKFAFLLEGRGSHVDLKAESQQLVEEVLLDIKDCFDIDF 299 Query: 268 IDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIP 326 D + L ++ H+ L + + + +K +P F+M++H ++ + P Sbjct: 300 RDDEELYNSLVIHMQSLLDRIKVDKPNTTAYLKEIKRQYPLVFEMAIHASDVISKATGKP 359 Query: 327 LFDSD--LIGLYFACALERH--QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARS 382 L + + + L+F A ERH + + ++++ +A IE II Sbjct: 360 LVEDEISYLALHFGTAYERHIDTQKYRVVMIIPHNQMLAKACMDKIETRFRERMEIIKVF 419 Query: 383 LSELVAIREEIEPLLIINNSHYLLD---DAVNNYITVKNIITAAGIEQIKHFLATAFIRQ 439 + + P LI+ + V+ + V + + + + Q Sbjct: 420 PFFENNMIASLHPDLILTVVPLQHELSIKTVSISLFVNYEDESQIFQALNQLDREKYHDQ 479 Query: 440 QPERFFSAPG-SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV 498 G + S + +C L+ + T + + + RE V Sbjct: 480 FCHIVKKLIGQETFFIKKDIASKEDAINYLCDNLIQLGYATQEYKEDVFKREEMAGTAFV 539 Query: 499 NRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLAS-- 556 A+PH + Q R + L PV+ + +L+ + L F S Sbjct: 540 QGFAVPHAITVQPLRSTISVMVLKNPVKWGKYEVRLILLLSISEQDNQMLHTFFDWLSNV 599 Query: 557 ILCQHPAEIIAGLTGYEAFMELL 579 ++ + Y+ FM+L+ Sbjct: 600 LIDYNQLMQFIEADNYQQFMKLM 622 >UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS system IIA component n=8 Tax=Streptococcus RepID=B4U3Q3_STREM Length = 665 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 99/659 (15%), Positives = 208/659 (31%), Gaps = 81/659 (12%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-S 56 ML+++++ IV L Q + LA+ G S RT+ + + L +L K S Sbjct: 2 MLSKKEMAIVAFLISQKGQFVSSATLAKAIGRSDRTVRKYLKELISSLPSKGAHIISKQG 61 Query: 57 AGYQLEIFERRSFFQLLQKH-----------------DNDDRLLALLLLNTFT-PRAQLA 98 GY LEI +F Q+ D + LL +L Sbjct: 62 QGYCLEIDHSMAFEIFWQESLASKKRLADVTQVEETVDREHYLLNKFFFEEPVWDFEELC 121 Query: 99 SALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIP 158 L + T + L ++ R + EE + + F Sbjct: 122 QELYISRTTLNHVLAVIRDRIRPYQLQLDVSHQRVQVTGKEEAIRHFIMDYFFATSFDDS 181 Query: 159 LAGITRD-NLQHLS------TACDNQHRWPLMQGDYLSSLILAIYALRNQLTD------- 204 + I + L H+ D L D++ ++ AL Q Sbjct: 182 MYAIVDNTFLDHIKFADITIIVLDECRDAKLKLSDFVMHNLVLHIALMVQRIRSGYPLAF 241 Query: 205 ----------EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG 254 + Q + ++ E G+ + ++ +H + Sbjct: 242 FSIPAAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVDGSPQDNKADD 301 Query: 255 LLQ--------RVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAW 305 LL+ + + +++ D+ L++ + H+ + +K+ + Sbjct: 302 LLRSHLKAGIVKASQLTGMSLEADSSLLQGLLAHMKPLATRLENHIQLTNPLTEEIKSKY 361 Query: 306 PAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER--HQNERQPIILLSDQNAIA 361 P AF ++ + E L D + I L+ A+ER ++++ + +++ + A Sbjct: 362 PEAFALTKQAFENIPELQAYDLSDDEWAYISLHVMAAIERYSNRHKLRVLVVCATGYGSA 421 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIE-PLLIINNSHYLLDDAVNNYITVKNII 420 + + +E++ R I +S +E ++ +II++ + ITV + Sbjct: 422 MMLKNRLEKEF-EGRFQIVDVISYYEITQERLQTVDVIISSISLANVMFLTPVITVSVFL 480 Query: 421 TAAGIEQIKHFLATA----------------FIRQQPERFFSAPGSFHYSNVRGESWQHI 464 + I+ I+ F+ Q + FS + + + Sbjct: 481 SDQDIKAIRQFIGEQEGIRREAASSSQMSLEKAEQILKGIFSPKRFLYVKEKLSKKALLL 540 Query: 465 TRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP 524 C +I+ RE + LA PH + + +P Sbjct: 541 KMIACLDEAMDEAFVEAFYHQIVLRENYSSIVFGEVLAFPHPANPMTYSEQVVVAVCQEP 600 Query: 525 VEVNN--EVINHVLIACAAADARHELKIFS-YLASILCQHPAEI-IAGLTGYEAFMELL 579 ++ + ++ + + + LK S L S + Q + + Y F+ L Sbjct: 601 IDWDESHRAVHFIFLLSPSKGRNSYLKYISPSLVSFVNQAELQQALLEEPSYAQFITLF 659 >UniRef50_C9A391 Transcriptional antiterminator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A391_ENTGA Length = 642 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 95/638 (14%), Positives = 215/638 (33%), Gaps = 63/638 (9%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + + +K++ L +Q + +LA++ G+S RTI I + ++ + S + GY Sbjct: 1 MKAKYIKLLHYLNEQDNWVSSTQLAEKFGLSKRTIKSYIADIQD---NESDLILSSNKGY 57 Query: 60 QLEIFERRSFFQLLQKHDND-------DRLLALLLLNTFTPRAQLASALNLPETWVAERL 112 ++ +FF + + LL L+ LA L + E+ + Sbjct: 58 RVVASNLVTFFNNTETSVPETPTERTAYLLLRLISTEEALSVYDLAEELFISESTLLSDT 117 Query: 113 PRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLL--RKDPFLIPLAGITRDNLQHL 170 +LK++ + TE+ + L+ L D + + + + Sbjct: 118 KKLKKQCSELAIEVRLTKDTLQLIGTEKAKRQLIHQTLLSELDNHFVDMTKLQESFIDFD 177 Query: 171 STACDNQHRWPLMQGDYLSS-----LILAIYALRNQLTDEWPQYPGDEI----------- 214 D+ ++ I+ A+ Q P E Sbjct: 178 LDYIKEIIAELFSDYDFFTNDYALTNIVIHLAIAVDRMKGNFQSPEAEAQAPHSIHPTVL 237 Query: 215 -------KQIVEHSGLFLGDNAVRTLTGLI--------------EKQHQQAQVISADNVQ 253 +++ E G+ +R L LI ++ + D V+ Sbjct: 238 KISEKIAEKVAERYGIRFPKEEIRDLAILISANGTSVNFTQISPDELEKVTDKNCLDLVR 297 Query: 254 GLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 +L +V + ++ + + H+ L R LK P +D ++ Sbjct: 298 KILAKVDELYFIDGNEPEFFIRFALHIKNLLYRINNGYSCRNPMTETLKKECPLIYDCAV 357 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERD 371 ++++++ + + + I + ALE + I +N +E+ Sbjct: 358 QVSHVIQKEIGYTISEDEIAYIAFHLGYALEIQKQRTNKINCTILVPHYYNMNIQVMEKL 417 Query: 372 VLNC-RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 N + +++ + ++ LI++ A Y+T+ T +QI Sbjct: 418 QKNFSDDLEIQNILTSEKELQYVDTELIVSAVKLKQVIA-TPYVTINPFFTLEDRQQITA 476 Query: 431 FLATAFIRQQPERFFSAPGSFHYSNVRGESWQ-----HITRQICAQLVAQHHITADEAQR 485 + +++ E+F S + + + +Q+C Q+ + + + Sbjct: 477 KIFDIKEKKRKEQFVKTFLSLVDKKRFSYTTENQNSAELLKQLCGQMKEEGIVDETFYPQ 536 Query: 486 IIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADAR 545 +I RE + +AIPH + R + ++ N + V + R Sbjct: 537 VIEREQLSSTAFGS-VAIPHSLTMNANRTGVAIAVNPKGIQWGNNRVTLVFLISINYHNR 595 Query: 546 HELK-IFSYLASIL-CQHPAEIIAGLTGYEAFMELLHK 581 H + IF LA I + ++ +T ++ F++ L + Sbjct: 596 HVFREIFDDLAMICTDEQNIHKLSAITTFDEFVDTLTQ 633 >UniRef50_C4FVQ8 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FVQ8_9FIRM Length = 649 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 97/635 (15%), Positives = 205/635 (32%), Gaps = 59/635 (9%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ++ RQ +++ +L Q +LA GVS RTI D++ L + I G Sbjct: 9 LMQTRQEQLMVILAQSQGWLKGRDLAALLGVSDRTIRSDMNKLKQ--DYPGAIQTHHHKG 66 Query: 59 YQLEIFERRSFFQLL-------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAER 111 Y+L Q Q+ L LL + L+ L + + Sbjct: 67 YRLVAQALEDSNQPSPLGLPQSQEERLHYILKLLLADSQPQTLKDLSQDLYVSPQTLTMD 126 Query: 112 LPRLKQRYERTCCLASRPG-LGHFIDETEEKRVILLANLLRKDPF-----LIPLAGITRD 165 L ++ Q L G + E ++ L LL + L + I + Sbjct: 127 LHQVGQLVGAYPDLDLEHDVKGWQLKGPEFQKRRLYRELLTSELQGDFLNLDKVLAIYEE 186 Query: 166 N----LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQY---------PGD 212 + H Q + L L L+L + ++ Y P + Sbjct: 187 FDMVWVAHYFQGLLKQADYQLRPAS-LPILLLHVGIAVQRMLAGQFLYHRQDLPPLVPKE 245 Query: 213 E------IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA-----------DNVQGL 255 E ++ + + + + ++ L+E + S VQ L Sbjct: 246 EALARKFLQGVGKQYKCRIPASEAYSIGRLLEAYQAMHDLASQVIYQGRPLDLTRLVQDL 305 Query: 256 LQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 Q + + L+ DA + HL + + E + ++K +P FD+++ Sbjct: 306 GQHLQDLVGLDFLSDADFKDRFHLHLQGLIERLHYQVELPNLFLQDMKRQYPLVFDLAVT 365 Query: 315 FITLLREQLDIPLFDSDL--IGLYFACALERHQN--ERQPIILLSDQNAIATINQLAIER 370 T L +L + L ++++ I ++ + R + + + I+L + + ++ Sbjct: 366 VSTWLGARLGVVLSEAEIGLIAVHIGSSYSRLERPWKARAILLAPQHYPLMQSSIDRLKA 425 Query: 371 DV-LNCRVIIARS-LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 ++ +SE + + ++ ++ T N + + Sbjct: 426 SFGHRLEILAQYDYVSEAQLLHQPVDLVISFMPLAQSFGLPTLQVSTFFNEEDELALVSL 485 Query: 429 KHFLATAFIRQQPERFFSAPGS--FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 + + I Q F Y +++ S + + + L ++T D + Sbjct: 486 LNQVEQRQIAIQLALQLGDFLESRFFYQDLQASSPEQVLTLMAQDLAQAGYVTPDFLPSV 545 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARH 546 + RE LAIPH + LA P+E + V++ Sbjct: 546 LEREALSSTDFDYALAIPHPLQAHSHQSVLAIANLASPIEWGRYPVKLVILLALKDSDWA 605 Query: 547 ELKIFSYLASILCQHPAEI--IAGLTGYEAFMELL 579 ++F HP ++ + + + F+ + Sbjct: 606 FTQVFFKWLGQCLAHPRQLKSLLAASSRDDFLAAI 640 >UniRef50_B6FYB2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYB2_9CLOT Length = 631 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 87/629 (13%), Positives = 205/629 (32%), Gaps = 54/629 (8%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML+ RQ+ ++++L T E+A+ V+ RTI DI+ +N + + I ++ AG Sbjct: 1 MLSNRQMNVINILSDSNNWMTGKEIAKILNVTDRTIRSDIESINKYYDCQ-LIESNRRAG 59 Query: 59 YQLEIFERRSFFQLLQKHDND-------DRLLALLLLNTFTPRAQLASALNLPETWVAER 111 Y ++ +++ + LL N QL + + + Sbjct: 60 YHIDDILLAKQDIEVKEIVPQTSHERCIWIIQELLFRNKEINLIQLQERVFVSGYSIDND 119 Query: 112 LPRLKQRYERTCCL-ASRPGLGHFIDETEEKRVILLANLLRKDP--FLIPLAGITRDNLQ 168 L ++++ E L R ++ E + L LL ++ + L I Sbjct: 120 LKKIRKIIENYPSLKLIRSKNHIRLEGEEIDKRKLYKYLLTEETHGNFMNLNSIADFWTD 179 Query: 169 HLSTACDNQHRWPLMQGDY---------------------LSSLILAIYALRNQLTDEWP 207 A + + DY ++ L + Sbjct: 180 FDLLAIKDIFEEVCEKYDYKIRETTFPMIMMHAGVAIERIINHNYLTSDIDDRLVESTEY 239 Query: 208 QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH-------QQAQVISADNVQGLLQRVP 260 + +++ + + + D+ V+ + L+ + + + L++++ Sbjct: 240 HVSYEFFERVSKLLDIEIVDDEVKRFSLLLLGKSSGDYRKSNNNKEDVKRLIDRLIEQIA 299 Query: 261 GIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 ++ D L + H+ + + + +K +P F+M++H ++ Sbjct: 300 EYFGVDFSKDWDLKVGLETHIRSLIERQRNKVDVTNLYLKEIKRKYPLVFEMAIHSAKVI 359 Query: 320 REQLDIPL--FDSDLIGLYFACALERHQN--ERQPIILLSDQNAIATINQLAIERDVLNC 375 + + + + + L+ A ER + + + ++++ ++ + + Sbjct: 360 EKFTGYVIDEPEIEFLALHLGAAYERIDSVQKYRAVVIMPHNQMLSKPCIEKLNSRFGDR 419 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 ++ + E EP II + V I + + +I L Sbjct: 420 MEVVKMFTFFEESQVMEYEPNFIITTLQIKHNLDV-PTIQISLFLNYEDESRIFQLLNQL 478 Query: 436 FIRQQPERFF-----SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE 490 + F + + ES I ++C +LV + + + RE Sbjct: 479 DKERYSADFKILVKKMIRKDLFHVHETYESSDEIINKLCNELVEKDLADERYKEDVFRRE 538 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKI 550 A+PH + + L +PV+ + + +++ LKI Sbjct: 539 SMSATSFSYGFAVPHSMEVSTKESCLSVMVLDKPVKWGDFDVRLIILLGIRDTDNSLLKI 598 Query: 551 FSYLAS--ILCQHPAEIIAGLTGYEAFME 577 F S + + + YE FM+ Sbjct: 599 FFEWLSNTVTDSKKLARLLAVNNYEDFMK 627 >UniRef50_A4AFC1 Transcription antiterminator, BglG family protein n=2 Tax=Actinobacteria (class) RepID=A4AFC1_9ACTN Length = 635 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 93/631 (14%), Positives = 217/631 (34%), Gaps = 55/631 (8%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML+ ++++ L Q T +LA + GV+ R++ + + + I +S AG Sbjct: 8 MLDN-HARLIEHLAQAEGWVTAADLADKLGVTTRSVRSYVTAVKSSALPLEVIESST-AG 65 Query: 59 YQLEIFERRSF------FQLLQKHDNDDRLLALL-LLNTFTPRAQLASALNLPETWVAER 111 Y+L F + + D L+ L LA + + E+ V Sbjct: 66 YRLHRENYAEFLKSASIRETERPRDRQYHLVRRLGDAPDGVDIHALAESFFVSESTVEAD 125 Query: 112 LPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF--LIPLAGITRDNLQH 169 L ++K + +R G + TE LL+ + R + + L I R+ Sbjct: 126 LRKIKASIAESGLTLTRRGSLVLLAGTEPNLRRLLSKMFRHEESQGFLELESIQREFESS 185 Query: 170 LSTACDNQHRWPLMQGDY------LSSLILAIYALRNQLTDEWP-------QYPGDEIKQ 216 + L Y ++ ++L + ++ + E P Q+ D Sbjct: 186 DLRSFKTALLELLDSHGYFVNEYGINHVLLHVAIATDRTSQEAPALPQSAPQFTNDLAAL 245 Query: 217 IVEHSGLFLGDNAVRTLTGLI-----------EKQHQQAQVISADNVQGLLQRVPGIASL 265 I H G+ LG + + + L+ E V+ +Q V + Sbjct: 246 ISTHFGVNLGRSDLNEIEVLLTTRVITRTADPEDASDVDLEQLISRVRRTVQHVGEEYLV 305 Query: 266 NIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 ++ D + ++ H+ + ++ R ++K +P +++++ ++ I Sbjct: 306 DLDDDDFIMRLSLHVRNLILRAQDLSYSRNPMTRSIKTTYPMIYELAVFIAAEVQRDEGI 365 Query: 326 PLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQLAIERDVL-NCRVII 379 + D + I L+ LER + ++ + + + I + IE + + + Sbjct: 366 TIHDDEISYIALHVGSHLERQAKREVRLTAALVCPNYHDLHVILRERIETVLGDELHLRV 425 Query: 380 ARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQ 439 + +++ + +L + D+ + ++ +T A ++ I+ + + Sbjct: 426 VITRTDVDLAELTTDLVLTTIDLRSFADN----VVLIQPFLTEADVDSIRKTIGRVRRLR 481 Query: 440 QPERFFSAPGSFH-----YSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE 494 + F N S + + + +++ I I RE Sbjct: 482 RRRTLTDELLRFFDPALFLRNFTAPSEEAMIAALGHRMIEAGVIDHSYITGAIERERMSS 541 Query: 495 NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELK-IFSY 553 + LA+PH + R + P++ +N + + +A R + +F Sbjct: 542 TAFTDSLAVPHAMTMSAHRTAISIVINETPMQWGENRVNVIALIAFSAAGRTTFQTVFDQ 601 Query: 554 LASILCQHPAEI--IAGLTGYEAFMELLHKG 582 ++ + + F++ L +G Sbjct: 602 FVTVFSDRDYVQQLVRKAVDFPTFIDELVRG 632 >UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing protein n=3 Tax=Enterococcus faecalis RepID=C7UBV6_ENTFA Length = 652 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 99/646 (15%), Positives = 214/646 (33%), Gaps = 71/646 (10%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 +++RQ K++ LL +Q ++ +S RT+ +DID LN L + G Sbjct: 4 ISKRQHKLLRLLLEQKDFLPVNHFSKILSISDRTLYKDIDELNKALKKRKIEILKRQGKG 63 Query: 59 YQLEIFERRSFFQL--------------LQKHDNDDRLLALLLLNTFTPRAQLASALNLP 104 L + + L L LLL N L+ + Sbjct: 64 IFLSKSDLSNDEILKIFGEASTQIDFNQLPLERQIKMAEYLLLRNKKVSYQLLSDEFLVS 123 Query: 105 ETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITR 164 T ++ L +++ E + G ++ E + + L R Sbjct: 124 RTSISNDLDQIQTVIEGSSVTIRSDNNGTKVNGNESEIQKAIKQYAYFIIDKSDLTNSYR 183 Query: 165 DNLQHLSTAC---------------DNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ- 208 L + ++ + D+ SL+L+I +L + + Sbjct: 184 VQFPSLLFSFLPKDIIKKVSGLLQTNDHFNIDKLSDDHFQSLVLSISIFVLRLQEGFHIE 243 Query: 209 -----------------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEK-------QHQQA 244 + ++ + + + L N + + Sbjct: 244 YQDNFLFENVESLKTFFLANELVENLELDNSIKLDSNDFEYFNRQLVAHGFEPRLRDLAI 303 Query: 245 QVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKA 303 Q V+ ++Q++ +++ D +L NI HL+ + + +K Sbjct: 304 QKEYDAVVRKMIQKMSDSIQVDLTRDEKLYMNILYHLVSMIYRSKLNVPVSNPLLEEIKR 363 Query: 304 AWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIA 361 + + + + + ++LDI L D + + ++F A++R R+ +I+ + Sbjct: 364 EYSVLYSTTWLILAGIEKELDIRLTDDEVAFMMIHFQGAIDRLSANRKILIVCPTGIGTS 423 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + ++R ++ SL L L+I + +D V V +++ Sbjct: 424 ELIANRLKRVFSPQDIVEVVSLRTLYKRDLNKIDLVISSVQLEKIDVPVTY---VSPLMS 480 Query: 422 AAGIEQIKHFLATAFIRQQPERFFSAPG------SFHYSNVRGESWQHITRQICAQLVAQ 475 ++++ F ++ + N + + ++I +L+ Sbjct: 481 KQDLKKVSATYLDLFYEEEVNDQPFEHLGKIIDSDLIFLNETVATKEQCIKRITQKLLQN 540 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 +T Q I RE G + AIPH + + +TL +P+ N +IN V Sbjct: 541 DFVTDSFEQAIWDREKLGVTDLPIGAAIPHPSPSTVKESKLVIMTLVKPIRWNFRMINTV 600 Query: 536 LIACAAADARHELK-IFSYLASILC-QHPAEIIAGLTGYEAFMELL 579 L+ C A +K I S + I+ + + E +++L Sbjct: 601 LMICVAEKDLKHIKGILSEIYRIVETKKNIDRFIFSKDEEEIVKVL 646 >UniRef50_C0X124 PRD/PTS system IIA 2 domain protein n=3 Tax=Enterococcus faecalis RepID=C0X124_ENTFA Length = 634 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 99/635 (15%), Positives = 214/635 (33%), Gaps = 65/635 (10%) Query: 2 LNERQLKIVDLLE---QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 L +Q +I+ LE T ELA+ G + RTI + +N S G Sbjct: 4 LESKQREIILFLESQQHHWVTAKELAEFCGCTTRTIRNRVAKINE---AYPEAILSSQRG 60 Query: 59 YQLEIFERRSFFQLLQKHDNDDRLLALLL--LNTFTPRAQLASALNLPETWVAERLPRLK 116 Y+ ++ S Q + R+ LL + LA L + E+ L +LK Sbjct: 61 YR--RNDQISILQETPSKERKARIFLELLKHSSEGVNLYDLADCLYISESTAKNDLQQLK 118 Query: 117 QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDN 176 + G ++ TE + + +LL + + + + + Sbjct: 119 EELANQQTTICFKGANIWLTGTERAKRQYMVSLLYAESDFQEKLTRSVREMIGYISLEEL 178 Query: 177 QHRWPLMQGDY----------------------------------LSSLILAIYALRNQL 202 + +Y L+ Y + ++ Sbjct: 179 EEMIQQTFFNYERRLNQYVLNNIVLHYAISIERIRQGHTLLTKPKLAENHSEEYQMAKEI 238 Query: 203 TDEWPQ-----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQ 257 + + +E+ Q+ S LF+G T+ + Q + ++ +LQ Sbjct: 239 ALRLEETYDILFSKEELAQL---SLLFVGIQKEHTVNSEKTQLQQIVNPKIIEVLEEVLQ 295 Query: 258 RVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 +V I + + + + + HL A R S + +LK +P +D+S++ + Sbjct: 296 KVEQIYFIQLKNKEFFNKLAIHLQGLYDRSNVEAFTRNSRLWDLKTGYPLIYDISVYISS 355 Query: 318 LLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATI---NQLAIERDV 372 ++E+L+I + + I L+ LE + E+QP +LL + Q ++ Sbjct: 356 FIQERLNIWFTEDEISFIALHLGSFLESQRTEQQPFLLLLVVEDYHNMREVLQKKLQEHF 415 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 N I + + + +++ + L+ N + IE + L Sbjct: 416 GNQ--INIKVVRQTNIDQKKFDLLVTTNRRLATKYEGAIFIHPFITTKELRKIENRMYLL 473 Query: 433 ----ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 + + ++F + F + + + + Q+ ++ Q + ++D + + Sbjct: 474 KGQKRKRQMEIRTDQFIAKELYFSQIDPADLTPEMLLDQMIQRMRIQKYCSSDFKKSVKK 533 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE + +A+PH + +TL +P+ N + V + + Sbjct: 534 REQLSPTSFPSGIAVPHAIDRTAEKSGISIMTLQEPIRWANYEVKLVALVAIRQEDAPIF 593 Query: 549 KIFSYLASILCQHP--AEIIAGLTGYEAFMELLHK 581 F + P + ++ Y AF+ + Sbjct: 594 DDFFEKFIEIMSEPIHIKQLSQTADYAAFVLKFKQ 628 >UniRef50_C2C4I7 Protein-N(Pi)-phosphohistidine--sugar phosphotransferase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4I7_LISGR Length = 635 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 103/633 (16%), Positives = 213/633 (33%), Gaps = 59/633 (9%) Query: 5 RQLKIVDLLEQQPRTPG--ELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQL 61 R+ I++ L + +L + VS RTI ++ YLN + GYQL Sbjct: 2 RREMILNHLLNKEVHISLADLTESFQVSERTIRNEVKYLNEDGIKNGFRIQTLRGQGYQL 61 Query: 62 EIFERRSFFQLLQKHD-----------NDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 +I + F L+K L L F QLAS L + + + + Sbjct: 62 QIENKPLFTDYLKKQTASFDTQSVSQRLLYLELLLFQQQDFITIDQLASQLQVSRSTIQQ 121 Query: 111 RLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD---- 165 L R+ L + G I E+K LA LL + R Sbjct: 122 DLKRVDTFLHTYGLLLKRKAHYGVQIVGPEKKHRAALAKLLNTSSEQLSQTEAYRSFRKT 181 Query: 166 -NLQHLSTACDNQ--HRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIK----QIV 218 ++Q L+ + H + L +++ + L +++ + ++ Sbjct: 182 LDIQALTLFIKERVTHYQIYISDVALRNMVDHVCILAFRVSQKNYIRMTGPLEKNPIYTA 241 Query: 219 EHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN----------------VQGLLQRVPGI 262 + A L +Q A+ + + + + Sbjct: 242 LSKDIAAFIEAQYHLDVPEAEQDFLAEHLIGKVTVDTISKEEKMRLQAKINDAMTAIDQQ 301 Query: 263 ASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR- 320 D +L + H+ + + + + +L + F++S+ F+ L+ Sbjct: 302 YGTAFQPDEELQNALLLHIYPLMLRLHYNLQLDNPIIEDLYTRYANVFNISISFVQYLQD 361 Query: 321 -EQLDIPLFDSDLIGLYFACALERHQNER-----QPIILLSDQNAIATINQLAIERDVLN 374 E I + + +YFA +LE+ +N++ + +L S A + ++ +E N Sbjct: 362 NEDFIITKDEIGYVAMYFAASLEKERNQKFRMYKKIGVLCSSGAGAAYLLKMKLESAFTN 421 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 ++ S+ EL +R + ++I +DD I + + ++K LA Sbjct: 422 AEIV-TFSMYELDKLR-NSDCDVVITTFPLTIDDLDIPVIETALLPGDQELARLKDTLAF 479 Query: 435 AFIRQQPERFFSAPGSFHYSNVR-----GESWQHITRQICAQLVAQHHITADEAQRIIAR 489 + Q + P +++ ++ I + C L+ + ++ R Sbjct: 480 SAETQTSPATDAEPLLSYFAEECFTITEANNYLDILKTRCHFLMEAGYAPPTFLDDVLER 539 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELK 549 E + + N +A PH R+ I L QP ++ + + + K Sbjct: 540 ENKMTTIYQNSIAGPHPIQMGARKECIDVIILKQPAYYMDKKVRLIFLLNLDKGHLFIHK 599 Query: 550 IFSYLASILCQH--PAEIIAGLTGYEAFMELLH 580 S L + ++ + + Y F+ +L Sbjct: 600 EVSRLMIRIMENDTVRKQLLACKNYAEFISILK 632 >UniRef50_C3RJ67 Transcription antiterminator bglG n=3 Tax=Bacteria RepID=C3RJ67_9MOLU Length = 635 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 95/633 (15%), Positives = 205/633 (32%), Gaps = 58/633 (9%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 MLN+RQ I+DLL + T E+A+ VS RTI DI+ +N + I A+ G Sbjct: 1 MLNKRQTNIIDLLNDYGKWITGKEIAKVLNVSDRTIRSDIENINNYYDC-ILIQANKRLG 59 Query: 59 YQLEI-------FERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAER 111 Y+L+ E + + + LL + L + + + Sbjct: 60 YRLDETLLHKQDIETKDIIPQTSQERCIYIIQELLFKSHEINLIALQDQVFVSGYSIDND 119 Query: 112 LPRLKQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLLRKDPF--------------- 155 + ++++ L R ++ E + L LL + Sbjct: 120 IKKIRKMINDYPSLKLVRSKNYISLEGNETDKRKLYKQLLTAETQGNFMNLNSIAGLWNS 179 Query: 156 --LIPLAGITRDNLQHLSTACDNQHR--WPLMQGDYLSSLILAIYALRNQLTDEWPQYPG 211 L+ + I + + + G + +I Y ++++ Sbjct: 180 FDLLEVKDILEEICEKYDYQIHEMTFPMIMIHAGVAIERIINHNYIKNQTISEKLESSRE 239 Query: 212 DEIKQ---------IVEHSGLFLGDNAVRTLTGLIEKQHQQAQV------ISADNVQGLL 256 +I I L G +++ + V+ ++ Sbjct: 240 YQISYDFFTQVSTMINIELVTDEVILFALLLMGKRANDYRKDIIKEKLAVDVEHLVEAVI 299 Query: 257 QRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 V ++ D L + HL L + + +K +P F+M++ Sbjct: 300 VEVKEYFDIDFSKDKDLKVGLAMHLQSLLERQKNNVQVTNVYLQEIKRKYPLVFEMAVRA 359 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERHQ--NERQPIILLSDQNAIATINQLAIERD 371 +L E + + +++ + L+ A +R + I+++ + ++ + + + + Sbjct: 360 GEVLAETCEDNINENELAFLALHLGAAYDRVNSLKRYRAIMIIPNNQMLSKMCRDKL-KI 418 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 R++I +S + E +I + L + + V I ++ Sbjct: 419 RFEERMMIVQSYGFFEESMVKEEEPDLIITTVPLKHNLNIPTVQVTLFINYEDESKVFQT 478 Query: 432 LATAFIRQQPERFFSAPG-----SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 L + + F S + + + I +C +L+ + T + + Sbjct: 479 LNILDKHRYHDDFVSLIKELMREDLFHVKNTMNNPKEIIDYLCDELIEKGLATQSYKEDV 538 Query: 487 IAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARH 546 RE VN A+PH + L +PV + +++ H Sbjct: 539 FRREAVSATSFVNGFAVPHSIEVSANESCISTLILDKPVIWGGFEVKLIILLAIRETDNH 598 Query: 547 ELKIFSYLASILCQHPAE--IIAGLTGYEAFME 577 LKIF S + + + + ++ FME Sbjct: 599 LLKIFFDWLSSIVSDSNKFTQLLEVREHQEFME 631 >UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7A6_THEAS Length = 646 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 103/636 (16%), Positives = 198/636 (31%), Gaps = 85/636 (13%) Query: 15 QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQL-EIFERRSFFQLL 73 + +LAQ+ G S RT+ + L L + + G + + +R +L+ Sbjct: 16 RDYTPLSDLAQRLGCSERTLRNHVRELEGPLRDRYGLILDRRPGRGVALLGDRSQVGRLI 75 Query: 74 QK---------HDNDDRLLALLLLNT-FTPRAQLASALNLPETWVAERLPRLKQRYE-RT 122 + + D R+L LL A++ A ++ L R + Sbjct: 76 RDLGGARDRPLEELDLRVLRFLLPRRCPVTMARVMEATGAGRGAISAALDRAEAWLAGHR 135 Query: 123 CCLASRPGLGHFIDETEEKRVILLANLL--------RKDP---------------FLIPL 159 L RP +G +I+ E + L+ L D + L Sbjct: 136 IRLVRRPNVGLWIEGEEGALRLALSRLFWLSLGSHGFDDFLRGRVSMEDPIFHPGEMSFL 195 Query: 160 AGITRDNLQ----------------HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT 203 R L+ HL+ + ++ L +L Sbjct: 196 EARVRRALEMAQVRLTGEAVLGLTVHLAVSIKRVRTGGALEICRDEGLEGRREMEAARLM 255 Query: 204 DEWPQ------YPGDEIKQIVEH--SGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGL 255 W + P E++ + H S LG + L E + A ++ Sbjct: 256 ARWVEEGLGVTMPPGEVEYLAMHVMSSRRLGCPGEKELARDAEAVARILLDHFARSLDRR 315 Query: 256 LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 LQ D QL+ +++GHL + + +K A+ +F++ L Sbjct: 316 LQE----------DPQLLADLSGHLSTSINRLRCGFPSSNPILGQIKRAFCYSFEVGLEG 365 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALER---HQNERQPIILLSDQNAIATINQLAIER 370 ++E + I L + + + L+ ALER + E + + I + + + Sbjct: 366 AARVQEDMGINLPEDEVGYVVLHVQAALERLRGMEEEVRAAVFCPQGVGILRLMEAKVSS 425 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 RVI A SL +L + E+ L+I L +I V ++ + ++ Sbjct: 426 AFPGVRVIGAGSLEDLKVVLEDRVRLVIST--VPLPAYLDCQHIVVTPLLRDEEMRSVED 483 Query: 431 FLATAFIRQ-------QPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEA 483 L P + I + A++ + D Sbjct: 484 LLLCKVSSSPGRPAGGYPILRSMLSSDLIFLGEDLGDRWDIICFLSARMAETGAVDEDYG 543 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD 543 + RE + I +AIPH + R + +PV E + V + + Sbjct: 544 GAALERERKSSTCIGGGVAIPHGSPRRVIRDSIALMRPRRPVLWGEEEVRMVFMMALRSS 603 Query: 544 ARHELK-IFSYLASILCQ-HPAEIIAGLTGYEAFME 577 ++ +F LA + + E ++ Sbjct: 604 DPGLVRGLFGELARLSEDGQTLRRMMFAGTREEILD 639 >UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WHN0_STRDG Length = 661 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 89/655 (13%), Positives = 208/655 (31%), Gaps = 76/655 (11%) Query: 1 MLNERQLKIVDLLEQQ---PRTPGELAQQTGVSGRTILRDIDYLNFTL---NGKARIFAS 54 MLN ++ I+ L Q T LA S RTI I L+ L + I + Sbjct: 1 MLNTKEKIILQYLYQHRGDYSTSKVLADYLSFSDRTIRTYIKKLSTDLPVEDTGFTIVSK 60 Query: 55 GSAGYQLEIFERRSFFQLLQKHD-------------NDDRLLALLLLNTFTPRAQLASAL 101 GYQLE+ + ++ L K++ + L L+ LA L Sbjct: 61 QGYGYQLEVLDDDTYHHFLVKNNLAVGMDYGDIDNRHKAILNKLIFKEETVLFDDLADQL 120 Query: 102 NLPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + + ++ +++ + + + S+P G ++ E+ + + + + F ++ Sbjct: 121 FVSRSTLSSDFKKIRSQLAKYQLSIESKPYRGVYVLGDEQDKRHFIMDYFFGEHFHQNMS 180 Query: 161 GITRDNLQHL--------STACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGD 212 ++ + D L DY ++ AL Q + + Sbjct: 181 NFVGKDILDIPLSMEELTIIVLDECRNQELKLSDYAIQNLVIHLALAIQRFQKGFRIAPV 240 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQR-------------- 258 E+ + L + N L + ++ + +A L+ + Sbjct: 241 ELCECKYQKELLVARNIADRLANRLGQEELIPEEETAYIALHLISKSVAEQDPEANLLNL 300 Query: 259 ----------VPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 + D L+E + HL L V + +++ + Sbjct: 301 RQELITALDNCDTSQGYDFSSDMALIEGLLMHLEVLLERLVNNIHLDNPLLEDIQKRYGD 360 Query: 308 AFDMSLHFITLL--REQLDIPLFDSDLIGLYFACALERHQNERQ--PIILLSDQNAIATI 363 ++ +F+ L ++ + + + L+F ++ER + + + +++ + A + Sbjct: 361 VLKLTENFLGDLPTFQKYYLSQDEIAYVSLHFMASIERQKEKHKLTVLVICATGFGSAQM 420 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 + I ++ I + + + I++ +TV ++ Sbjct: 421 LKNRITNELGQLVTISDVIGYYDLDNDKLKDVDAIMSTIDLSNLVFNIPVLTVSVFLSDQ 480 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSF--------------HYSNVRGESWQHITRQIC 469 I++ K + +Q+ + S ++ + S + ++ Sbjct: 481 EIQEAKQTFSKIQGKQRRRNITARDLSLDTAASAFKHYFSEENFLVLENASKAEVMEEMI 540 Query: 470 AQLVAQHHITADEAQRIIA-REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVN 528 +LV E +I RE + +A+PH + + + V Sbjct: 541 RRLVPDDSDHQKELADLIRGRERLSTLVFDQEIAVPHPLKPISEKHQIAVAVVKNGVYWE 600 Query: 529 N--EVINHVLIACAAADARHELKIFSYLASILCQ--HPAEIIAGLTGYEAFMELL 579 + E I + + + LK + L E + +E+F + Sbjct: 601 DGFEKIKLIFLVAPSVYTNEGLKPITNRIVDLVDLPEVKEQLINTEDFESFKSIF 655 >UniRef50_A8RW19 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW19_9CLOT Length = 675 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 106/659 (16%), Positives = 208/659 (31%), Gaps = 80/659 (12%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA--SGS 56 M+ ERQ KI+ LL + T LA S +TI D+ L L + Sbjct: 9 MMQERQYKILKLLYRSDGFVTVERLAADVNCSLKTIRNDLKQLGSFLEEYGLGKVVSKSN 68 Query: 57 AGYQLEIFER---------RSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 G L + L D ++L LLL + +L L + Sbjct: 69 KGVCLIKDKDWDTAKQAWNDVNQMELYGTDKHFQILELLLKQRSIQKMKLEQRLLISRLD 128 Query: 108 VAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLL------RKDPFLIPLA 160 + + + + G G I+ +E + + L R++ L Sbjct: 129 AEKAASQASVWLTAHHVAVTCKRGQGLQIECSEYYWRMAMWELFADISRKRQEFGDQTLK 188 Query: 161 GITRDNLQHLSTA--------CDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGD 212 T L A + + Y L + E+ + P D Sbjct: 189 SQTEKFLWGFDMAGVTGAIAGLEKKFGIHYSFDGYQQLSFLLSLCVIRIRKKEYAEIPAD 248 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEK----------QHQQAQVISADNVQGLLQRVPGI 262 Q E GL + T +++ + V+ A +Q Sbjct: 249 FGHQRAEWQGLEYDLSMAETCMESLKEYYHTDFPEGEKQFTVLVLGAAEIQEFTDEASRQ 308 Query: 263 ASLNII------------------------DAQLVENITGHLLRCLAAPVWIAEHRQSSM 298 + D L +++ ++ Sbjct: 309 TYMEANQNICRVTDKVISITGNILGQGLDRDDYLFDSLLLYMKSKTLKLRCGILEENPLK 368 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSD 356 +K+ +P + + ++ +L++ + + + + LY A+ER + IL + Sbjct: 369 EVVKSKYPNIYAAAWSASLIIESELEVRIGEDEVAYLALYIGGAIERLNVGVEVCILCNH 428 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 I+ I + IER + N V+ + + I+ LI + A + + + Sbjct: 429 GIGISRILKEQIERSIQNINVVDVLTTRDTCKIQRSQCDFLISS-VPVGDVFAGRDVVQI 487 Query: 417 KNIITAAGIEQIKHFLATAFIRQQPE--------RFFSAPGSFHYSNVRGESWQHITRQI 468 N++ I+QI++ + ++ + S Y + I + Sbjct: 488 GNVLQPWDIQQIQNKMKQVRKKKMRRIAEKTELSEYQLFHPSLVYHFPERTHKKEIISFL 547 Query: 469 CAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVN 528 CA+L ++T D Q ++ RE ++ +AIPH + R L +PV+ Sbjct: 548 CARLAEAGYVTKDYEQTVLDREETTSTVLELGVAIPHGAAFCVCRPVIAAAILEEPVDWG 607 Query: 529 -NEVINHVLIACAAADAR-----HELKIFSYLASILCQHPA-EIIAGLTGYEAFMELLH 580 + ++ + + D R ++ +S + ++L A E L G E L+ Sbjct: 608 RDRRVDRIFLLALNLDERFKAKGQIIRFYSAIVTLLDDKEAYEEFHSLRGQEEIAGYLN 666 >UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Listeria RepID=Q723N6_LISMF Length = 653 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 82/646 (12%), Positives = 197/646 (30%), Gaps = 67/646 (10%) Query: 1 MLNERQLKIVDLLEQQPRT-PGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-G 58 M+ R+ I+ L + +T G +A G+S +T+ + ++ L G Sbjct: 7 MIANREKNIIQFLMKTGQTRVGTIANHLGLSEKTVSNSLKEIDVFLKDFDMTVVRKPKIG 66 Query: 59 YQLEIFERR--SFFQLLQ----------KHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 +E + + L + LL + + QLA L + + Sbjct: 67 VYIEGDNKAFAEVSRFLDNQVSPIPSTKEERVIYIFSKLLKADDYITIHQLADELYISRS 126 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 + + + + + E+ L +P G + +E ++ L + + + Sbjct: 127 TIEKNMVEVTKMLEKEGITLYKKPSKGMKLLISEREKRALTSKFINNFWGNNWYLKQEGE 186 Query: 166 NLQH---------------------LSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTD 204 + ++ R DY I+ A+ + Sbjct: 187 KVLQAFDTIKADVTGIFPEEGLKEIIAIVQAFSERHDFAFTDYAFQSIVIHLAIAVERIR 246 Query: 205 EWPQYPGDE------------------IKQIVEHSGLFLGDNAVRTLTGLI----EKQHQ 242 E + + + + + V + + +QH Sbjct: 247 AGEYIENVESDPMKDVFDSQRNNTEILVSMLEDRLDIKIPAFEVGYIQLHLTAAYNQQHD 306 Query: 243 QAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 + V + + V + D L++++T H+ + + ++ +K Sbjct: 307 ELLVSVRPKEDDVAEFVSTCLAEGNYDKSLLDDLTTHMKSAINRLKLGMHFKNPYLSKIK 366 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSDQ 357 +P AF+ +L+F ++ D+ + + + I L+F ER ++ + + +++ S Sbjct: 367 QNFPQAFEEALYFKAKFEQKYDVQVNEDETAYIALHFEAYKERSRSFPDQIRVVLVCSTG 426 Query: 358 NAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVK 417 + + I++ + S+ L+ +++ ++ ++ + Sbjct: 427 LGSSRLLAARIKKYFPMITIEKILSVQALMETEVDVDLVISTIYLELEDIPSIVVSPMMS 486 Query: 418 NIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHH 477 QI+ R QP P + ++ + + + QI +LV Sbjct: 487 KADLQQVESQIERTRRKKKKRSQPFVDLIEPKT-IFAKLDVATMEDAITQIGNKLVNLGI 545 Query: 478 ITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLI 537 + + + RE +A PH TL PV+ ++ + Sbjct: 546 AKSGIVESALKREALSFTSF-EEMATPHADPALINESHIAIATLKNPVKWGLVEVDKIFF 604 Query: 538 ACAAADARHELK-IFSYLASILCQHP-AEIIAGLTGYEAFMELLHK 581 L ++ + E + L E L K Sbjct: 605 IALTEQNGINLDAMYEQFYKYIDNKKWLEKLTQLKSAAEIYEHLLK 650 >UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Q3_9FIRM Length = 655 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 105/648 (16%), Positives = 223/648 (34%), Gaps = 75/648 (11%) Query: 6 QLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI-- 63 QL + LL ++ T G+LA++ G+S +TI ++ +N L + + Sbjct: 11 QLILKALLNKEMVTTGQLAEEIGLSEKTIRTKVEVINNMLLDNQLGEICKKPRIGIWLDA 70 Query: 64 --FERRSFFQLLQKHDNDDRL----------LALLLL---NTFTPRAQLASALNLPETWV 108 +R L+ N D L L L+L N QLAS L L Sbjct: 71 DPQQRLKINSLINNSANMDVLQNDQIRTATALKLILKSTKNNTLTTKQLASQLYLSVPTT 130 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 + + + + L G + E + L + + K + + Sbjct: 131 LKVINDCRSWLKLFNIELNVVRNKGLELAYNEVSYRLALKHFILKFDTETNVEESILFFM 190 Query: 168 QHLST------ACDNQHRWPLMQGDYLSSLILAIYALR---NQLTDEWPQYPGDEIKQIV 218 L + + W + + +L +L NQ + DE +++ Sbjct: 191 PGLDLDAIRRGIMETEKEWSFEFAEESFNEVLVYASLAIYQNQQKNGRKLKFSDEELEML 250 Query: 219 EHSGLFLGDNAV------RTLTGLIEKQH-------------------------QQAQVI 247 + + A+ L ++ ++ Sbjct: 251 QKYNEYSFAEAIFKKLGAHFNMTLPTEEKAFLSIQILCSKLIDSGYSADSGEVLREYDNK 310 Query: 248 SADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 + V+ ++ V + ++++ D LV + H+ L + H N +K + Sbjct: 311 LQEFVRKIISVVSNVLNVDLTHDEALVHGLLIHMRPTLFRLRYERGHTNGLTNYIKTEYK 370 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATIN 364 F ++ L E D+ + + + I LY ALER++N + +++ + I + Sbjct: 371 KTFRVAWLISVLFEEYFDLKVSEDELGYIVLYIQSALERNENPVRTMLVSASGMGINQML 430 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 I R + S+ + I + + LI+ L D + + + ++ A Sbjct: 431 CDKICRSFSLIHSVKVVSVHDF-KIEKVEDVDLILTTRELGLHDP--RIVEIDDFLSDAS 487 Query: 425 IEQIKHFLATAFIRQQPERFFSAPG------SFHYSNVRGESWQHITRQICAQLVAQHHI 478 I++I H++ + + E F A ++++ + + + +C +LV + ++ Sbjct: 488 IQKINHWIRNTILNKVSEAQFDADCHQLFEPDLIFTHLEIDDKPALLKFLCDRLVRKGYV 547 Query: 479 TADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA 538 T + ++ RE I N +AIPH + R TL +P+ ++E ++ + + Sbjct: 548 TRKYVKTVLDREAFTPTSIGNGVAIPHGDQNEINEARVVIATLEKPILWDSEQVDVIFLL 607 Query: 539 CAAADARHEL---KIFSYLASILC--QHPAEIIAGLTGYEAFMELLHK 581 E+ + F L ++ F + L K Sbjct: 608 VVKMTNDFEIRRTQAFYKQYIKLVGTDEQVNVLRNFQTNVDFYKYLIK 655 Score = 41.9 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 33/278 (11%), Positives = 77/278 (27%), Gaps = 24/278 (8%) Query: 74 QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCC--LASRPGL 131 + + +L LL QLA + L E + ++ + + +P + Sbjct: 5 KSNYYTQLILKALLNKEMVTTGQLAEEIGLSEKTIRTKVEVINNMLLDNQLGEICKKPRI 64 Query: 132 GHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSL 191 G ++D ++R+ + +L+ + L L + L S L Sbjct: 65 GIWLDADPQQRLKI-NSLINNSANMDVLQNDQIRTATALKLILKSTKNNTLTTKQLASQL 123 Query: 192 ILAIYALRNQLTD--EWPQYPGDEI------------KQIVEHSGLFLGDNAVRTLTGLI 237 L++ + D W + E+ ++ L T T + Sbjct: 124 YLSVPTTLKVINDCRSWLKLFNIELNVVRNKGLELAYNEVSYRLALKHFILKFDTETNVE 183 Query: 238 EKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVW----IAEH 293 E + D ++ + S + E + + + Sbjct: 184 ESILFFMPGLDLDAIRRGIMETEKEWSFEFAEESFNEVLVY-ASLAIYQNQQKNGRKLKF 242 Query: 294 RQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD 331 + L+ +F + L ++ L + Sbjct: 243 SDEELEMLQKYNEYSF--AEAIFKKLGAHFNMTLPTEE 278 >UniRef50_A8RJT7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJT7_9CLOT Length = 649 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 85/628 (13%), Positives = 201/628 (32%), Gaps = 52/628 (8%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 + RQ +I DLL + T ++A +S RT+ DI +N + I + GY Sbjct: 23 MTARQKRIWDLLAEHDCLTSQQIAALLHISDRTVRSDIKEINGEHASE-VIRSKKGQGYF 81 Query: 61 LEIFERRSFFQLLQKHDNDDR----LLALLLLNTFTPRAQLASALNLPETWVAERLPRLK 116 ++ + + +D ++ +L TP +LA L + +T +++ + L Sbjct: 82 IDAGQPEKNVPASKPQRPEDDLEWAIIRQVLFCRETPYLELAEELFISDTLLSKIVSELN 141 Query: 117 QRYERTCCL--ASRPGLGHFIDETEEKRVILLANLL--------RKDPFLIPLAGITRDN 166 + R L + + +EE++ + P I Sbjct: 142 RNITRRHSLPAILKQNGILSLAASEEEKRSYYTLYIMNRNVNHYFDMEQFQPFFDIVDLK 201 Query: 167 LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ------------------LTDEWPQ 208 + + + LI+ + + + Sbjct: 202 ELKELMFRELDLLSRHLYDTTIVRLIIDTAVMAERAVCGFFMPETPSVTPETPYGKSSEE 261 Query: 209 YPGDEIKQIVEHSGLFLGDNA---VRTLTGLIEKQHQQAQVISAD-----NVQGLLQRVP 260 + + +E G L + + + D ++ +L + Sbjct: 262 GAVNTGRHFLEELGSRLFISFPPSEYEYFSRLFQNDFYYVREQPDSQAESLLEKILIEIN 321 Query: 261 GIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 + D +T L L ++ +K+ +P +D+++ F Sbjct: 322 VEYGFDFTVDKNFCHEMTEQLHGALERRRHRQHVINPVLSTIKSKYPLEYDIAIFFADRF 381 Query: 320 REQLDIPLFDSDL--IGLYFACALERH--QNERQPIILLSDQNAIATINQLAIERDVLNC 375 + I L + ++ ++F A+E + + E++ ++ I + + D+ C Sbjct: 382 KNLSGISLSEDEISLFAIHFIRAMETNLGRTEQRVGLINPYGKQIKELMVKRL-GDMGEC 440 Query: 376 RVIIARSLSELVAIREEIEPLL-IINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 R IA + S E + +L ++ + A I +N + E++ + Sbjct: 441 RFQIAYTWSVFDYPHEMPKDILAVLTTVPLPVQPADVPVILCRNFLNYHEKEKLLTVVRD 500 Query: 435 AFIRQQPERFFSAPG-SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 + + F + S ++++ +S + +C +L Q ++ + ++ RE Sbjct: 501 SEVNSIRTYFRTLFKPSLFFTDMEFDSRRSAVAFLCGKLREQGYVGPGFLESVMQRESIA 560 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY 553 A H +R L + + + + A H + Sbjct: 561 PTAFEPGFAFAHAMENNAKRTAVCVCVLKNKLPWGEYNVKIIFLFALAPTWNHTIIPIYN 620 Query: 554 LA--SILCQHPAEIIAGLTGYEAFMELL 579 + ++ + +A + FM+LL Sbjct: 621 VMIDNLFKTNTIYKLAKIRDCRQFMDLL 648 >UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=14 Tax=Streptococcus RepID=Q1JGE0_STRPD Length = 664 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 97/659 (14%), Positives = 211/659 (32%), Gaps = 81/659 (12%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-S 56 ML++++L I+ L + LA+ G+S RT+ + + L +L S Sbjct: 1 MLSKKELAIITFLIHHKEQFVSSATLAEVIGMSDRTVRKYLKELISSLPEHGAHIISKQG 60 Query: 57 AGYQLEIFERRSFFQLLQKH-----------------DNDDRLLALLLLNTFT-PRAQLA 98 GY LEI +F Q+ D +D +L +L Sbjct: 61 RGYCLEIDHSMAFDIFWQESVTSKKRLADVTQVEESVDREDYVLHKFFFEDAVQDFEELC 120 Query: 99 SALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIP 158 L + T + L +K+R I EE + + F Sbjct: 121 QELYISRTTLKHVLAGIKERIIPYQLELEITHQHIQIRGKEEDIRHFIMDYFFVTSFDNT 180 Query: 159 LAGITRDNLQH-------LSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTD------- 204 L+ + + + L D++ + ++ AL Q Sbjct: 181 LSTMVGNTFLEGINFAEIMIIVLYECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLEL 240 Query: 205 ----------EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG 254 + Q + ++ E G+ + ++ +H + DN Sbjct: 241 FSIPIAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDE 300 Query: 255 --------LLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAW 305 + ++ + + + D L + + H++ + +K+ + Sbjct: 301 KLQDHLKACIAKISQLTGMTLETDTNLFQGLLAHMMPLTTRLENHIQLTNPLTEEIKSQY 360 Query: 306 PAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER--HQNERQPIILLSDQNAIA 361 P F ++ + L + + D + I L+ A+ER ++++ + +++ + A Sbjct: 361 PEIFTLTKQTFSDLLVCQNNDVSDDEWAYISLHLMAAIERYSNRHKLRVLVVCATGYGSA 420 Query: 362 TINQLAIERDV-LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 + + +E++ R++ S E+ R + LII++ + ITV + Sbjct: 421 MMLKNRLEKEFEGRLRIVDVISYYEITEERLKT-VDLIISSISLANLMFLTPAITVSVFL 479 Query: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPG--------------SFHYSNVRGESWQHITR 466 + IE I+ F+ ++ S + S + + Sbjct: 480 SNQDIETIRQFIGEQEGIKKEVSLPSQMSLAKAEQLLTGVFSPNRFLYLDEKISKEDLLL 539 Query: 467 QICAQLVAQHHIT--ADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP 524 ++ A L T D +++ RE + LA PH + + +P Sbjct: 540 RMIACLDEAGTETFVEDFYHQMVLRENYSPVIYGEVLAFPHPANPMTYSEQVVVAICREP 599 Query: 525 VEVN--NEVINHVLIACAAADARHELKIFSYLASILCQHPAEI--IAGLTGYEAFMELL 579 +E + ++ ++ V + + H LK S + + Y FM + Sbjct: 600 LEWDKAHQAVHFVFLLSPSKGHNHRLKYVSPGLASFVNQVELQQALLEEPNYSKFMTVF 658 >UniRef50_A8AYR4 Transcription antiterminator BglG family n=1 Tax=Streptococcus gordonii str. Challis RepID=A8AYR4_STRGC Length = 629 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 92/630 (14%), Positives = 197/630 (31%), Gaps = 50/630 (7%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML +RQ I+D+L + T LAQ VS RTI DI+ +N + I ++ G Sbjct: 1 MLKKRQNNIIDILNDKAEWITGKALAQMLNVSDRTIRSDIESINMEYQRE-IIISNKRLG 59 Query: 59 YQLEI-------FERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAER 111 Y+L+ E + + + LL + L + + + + Sbjct: 60 YKLDEQAISEMELETHNIIPQTPQERCIWIIKELLFNSRELNLYDLENRVFISGYSIEND 119 Query: 112 LPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF---------------- 155 L R+K+ + R + E ++ L LL + Sbjct: 120 LGRIKKMIKDYHLNLKRSKNFVELIGEENEKRKLYRKLLTDEVQGNFTNLNILANLFSDF 179 Query: 156 -LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEI 214 + ++ I + +M ++ + + + Sbjct: 180 DFLKISDIFTETCYEYDYQIKESLFPIVMIHAGVAIERIISGNYAENIELPNESFTETLE 239 Query: 215 KQIV------------EHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGI 262 Q+ HS L +Q + + V +L ++ Sbjct: 240 YQLSQDFFARVEQGCQIHSVENEIIKFAILLCSSNSQQDFTQKKEIREIVVAVLTKINDN 299 Query: 263 ASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLRE 321 +N D + LV + H+ + + +K +P F+M++H +L E Sbjct: 300 FDINFSDDEALVSGLGNHISSLIERQKTNTSMSNVYLREIKRKYPLVFEMAVHAGEVLSE 359 Query: 322 QLDIPLFDSD--LIGLYFACALERHQN--ERQPIILLSDQNAIATINQLAIERDVLNCRV 377 +L + +++ I L+ A +R + + + ++++ + ++ I + Sbjct: 360 RLGKKVSENELSFIALHLGAAYDRVNSPSKYRAVVIIPNNQMLSKPFIDKINSRFEDRMT 419 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNY---ITVKNIITAAGIEQIKHFLAT 434 I+ I P LII+ + + + + + Sbjct: 420 IVFNYKIFDERQVRAISPDLIISTVSLKHQIKIPTLQLSLLFDYEDESKIFQLLNQLDKE 479 Query: 435 AFIRQQPERFFSA-PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 + + + Y + +C +L+ + D +I RE Sbjct: 480 RYHEKFQKMMEHLIQKKLFYRKDHVADGEEAIEYLCNELIKEGLADEDYKANVIKRERIS 539 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY 553 V A+PH +TL +PV+ N + V++ + + IF Sbjct: 540 ATSFVQGFAVPHAIEISTSESCIATLTLDKPVQWGNFEVRLVILLAIRGEDNQLMSIFFD 599 Query: 554 LASILCQHPAEI--IAGLTGYEAFMELLHK 581 S L P ++ + + F+E + + Sbjct: 600 WLSNLVMDPQKLSALLKARDQKDFIENILE 629 >UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=Clostridium difficile RepID=Q184K6_CLOD6 Length = 656 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 93/653 (14%), Positives = 207/653 (31%), Gaps = 78/653 (11%) Query: 1 MLNERQLKIVDLLEQQ-PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 M+ R++KI+ L ++ T +A VS +T+ + + + L Sbjct: 7 MIQNREIKIIKFLLKEGHTTVKAIADDLDVSEKTVSKSLKEVEAVLKKIGLSLIRKPKIG 66 Query: 60 QLEIFERRSFFQLLQKH------DNDDRLLA----LLLLNTFTPRAQLASALNLPETWVA 109 + + L ++R++ LL N + QL+ L + + Sbjct: 67 VYIDGDLKKILPYLDNKGSQIPTTREERVIYIYSVLLKSNDYITIQQLSDELYISRGTIE 126 Query: 110 ERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRK---------------- 152 L +++ + + +P G ++ +E + L A + K Sbjct: 127 RDLAEVEKLLKNEGISIYKKPSKGIKLNISERDKRQLTAKFIHKFWSRNWYIKQEQESFY 186 Query: 153 ---------------DPFLIPLAGITRDN----------------LQHLSTACDNQHRWP 181 + L + I R+ + HL+ A + + Sbjct: 187 QAFEKIQADVNGIFSEDDLSIIIDILRNFSRERKFEFSDYEFQSLVIHLAIAVERIRKGE 246 Query: 182 LMQGDYLSSLILAIYA-----LRNQLTDEW-PQYPGDEIKQIVEHSGLFLGDNAVRTLTG 235 ++ I L QL +++ P EI I H L + Sbjct: 247 YIEESLYIGNIENNQMSNTNYLAKQLEEKFSILLPKSEIGYINLH----LVASDQHRDNN 302 Query: 236 LIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQ 295 ++ S +N+ L + + D L++ +T H+ + + + Sbjct: 303 ELKNTSTNPCETSTNNISNLREIIKNTLYETAYDKDLIDGLTSHVHSSINRLKYGLSIKN 362 Query: 296 SSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ---NERQP 350 +N +K + +F+ +L ++ DI + D + I L+F ER + + Sbjct: 363 PYVNTIKQNFSLSFEQALDLKKVIEFIYDIRINDDECAYIALHFEAFRERMKELPQNIRV 422 Query: 351 IILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAV 410 I++ S + + I++ ++ S+ ELV+ + + + ++ Sbjct: 423 ILVCSTGLGSSRLLSARIKKYFPMIKIEKVLSVQELVSSKIDADLVISTIYLELET-IPT 481 Query: 411 NNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICA 470 + N +E+ +++ ++ N+ +++ I Sbjct: 482 IVVSPILNESDIRTLERNIQNVSSCTSKKYKSFRNLIFEENILLNIEASNYEDAINHITD 541 Query: 471 QLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE 530 L+ + A+ I RE +A PH ++ TL P+ NE Sbjct: 542 NLIKKGFAKEGIAKSAIERENLSYTSF-QSIATPHANPSYIKKSNISVATLKNPITWGNE 600 Query: 531 VINHVLIACAAADARHEL-KIFSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 + + D EL +I+ + I T + +LL + Sbjct: 601 KVEVIFFISLENDKNLELDEIYEVFYDFIDNKKNINDILSATSTKEVYDLLVE 653 >UniRef50_C9A1R6 Predicted protein n=4 Tax=Enterococcus RepID=C9A1R6_ENTGA Length = 651 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 84/643 (13%), Positives = 213/643 (33%), Gaps = 62/643 (9%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS----- 54 L++R+ ++ LL ++ R +Q VS +T+ D+ L + A Sbjct: 3 LSKREKVLLQLLLTQKEFRPAAFFQEQLYVSLKTVYTDLASLEEKIKPYGLTIARLPRRG 62 Query: 55 ---------GSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPE 105 GY+L + E + + ++ A + Sbjct: 63 VKLEGNPTAREKGYKLIVTEGKIVDEYSPEYRKLFIFANYFFSKKPMHYQGFAEYFYVSY 122 Query: 106 TWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLI-------- 157 + + + L ++ AS G ++E E + + L K Sbjct: 123 QSIKKDVDELFAFCQKKKVRASMSAKGLKLEEEESVQQATFKSFLEKHTDSARLDHSAIQ 182 Query: 158 -----PLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYA-----LRNQLTDEWP 207 + +T + +S Q ++ +S I L Q + Sbjct: 183 TLFDPKIVTLTTALISEISLTLGRQLNSYFVESLTVSLEIFLSRICLGRHLEQQENLGFE 242 Query: 208 QYPGDEIK--------QIVEHSGLFLGDNAVRTLTGLIEKQ--------HQQAQVISADN 251 + ++ +I + L + ++ + L+ ++ + + Sbjct: 243 KLKQMKLYMVAVSFAERIESELAVSLAETDIQYICSLLLAHGIEPYMQITEKREANVIET 302 Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 + +++++ + ++ D L++ + H++ + + + +K + F Sbjct: 303 TEEMIEKMSRLLDTDLTQDNLLLQALLSHIVPMIHRLKNGMLVKNPLLRLIKKQYSTMFT 362 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAI 368 ++ + I L + + L + + + ++F A E+ + + +I+ S A + + I Sbjct: 363 LTKYAIGGLEKNFALFLTEDEVSFLTIHFQLAFEKIKVTKHVLIVCSSGLATSELIFNRI 422 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI--- 425 ++ + V+ S +L + E+ L+I + V + A I Sbjct: 423 KQTISATTVLEIISAEKLASTSLELVDLIISTVPLEEVSPPVLYVSPLPTTEEIAMISAN 482 Query: 426 ----EQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 + + L ++ + +F Y N + + + + ++ H +T D Sbjct: 483 LSNLNENEKKLHSSKYQSSELLQKYLDPAFLYINQPFNTKKDVLDFLAESYLSHHLVTND 542 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA 541 Q + ARE G + +AIPH + + + F+TL + ++ + + V++ A Sbjct: 543 FKQSLYAREELGSTGLKTGVAIPHADPQTVKTTKLAFVTLPKAIKWGDTEVQLVVLLAIA 602 Query: 542 ADA-RHELKIFSYLASILCQ-HPAEIIAGLTGYEAFMELLHKG 582 ++ + + + + E L KG Sbjct: 603 EKNMSEAKELIASIYDLFNSPEEIRWVVSSKNREELYRKLVKG 645 >UniRef50_B0MAU3 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAU3_9FIRM Length = 657 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 79/652 (12%), Positives = 192/652 (29%), Gaps = 73/652 (11%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-S 56 ML++ KI+ +L Q T +A +S R++ + Sbjct: 1 MLSKTASKIMRVLIHQDDEFITYERIAGMLEISERSVHNYMKEAAEFCEENGYRLVRRRG 60 Query: 57 AGYQLE-IFERRSFFQLLQKHD--------NDDRLLALLLLN-TFTPRAQLASALNLPET 106 G L+ R+ L K ++ L+ N + A L + ++ Sbjct: 61 KGVCLQAGLHRKELEHLFPKDQIPCETRKYRMCYIIRTLIENGEPYTGSLFAEELFVSKS 120 Query: 107 WVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLA------------------ 147 + + + + E C+ G G I E +L Sbjct: 121 TICTDIEKANKMLEPDRVCIRRIVGKGIIIQGREFDLRKVLVCQNQKVYLEEVPKSAAVP 180 Query: 148 NLLRKDPFLIPLAGITRDNLQHLSTACDN--QHRWPLMQGDY------------------ 187 + R + AC + + DY Sbjct: 181 DYRIDPVTYARFLSQYRKSTADKVIACIQQLERQIGTQFNDYTFCMLAEYTSSQMNRLRG 240 Query: 188 ---LSSLILAIYALRNQLTD--------EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGL 236 L +++ L ++ D Q+ + + + L L V+ + + Sbjct: 241 GHCLEESMISRLTLVEEIADWTDIFTGLLNRQFRMNIDPREGLYLYLLLLGAEVQNSSRI 300 Query: 237 IEKQHQQAQVISADNV-QGLLQRVPGIASLNIIDAQLVE-NITGHLLRCLAAPVWIAEHR 294 + K+ + I ++ Q ++Q + I + + L++ + L + E + Sbjct: 301 VNKKFLIEKEIDIEDAAQNMIQYISSIVGRDFREDPLLKTSTALFLNSSFIRVKFGFEIK 360 Query: 295 QSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPII 352 ++ +K + A F + + + + + F A+ +++ + ++ Sbjct: 361 NPFLDEIKRTYSAIFSACFTASKEYESLVGAFPTEDEISYMAILFGGAMVQNKRDINTVV 420 Query: 353 LLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNN 412 + S IA I IE +++ V + V I E L+I + Sbjct: 421 IGSGGVGIAQIIARKIEHKIMDINVTSVLPANAGVMIDESQYDLVITTVPSLKIKHPYVV 480 Query: 413 YIT--VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS-FHYSNVRGESWQHITRQIC 469 Y T V + ++ + + + + + ++C Sbjct: 481 YTTPLVGEQDVFRIKKVCHEMKEKKKNLEKRWTIKNLMEDELIFLESGTMTKKALLHKVC 540 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 +L ++ + ++ RE +++ +A+PH + + I VE + Sbjct: 541 RKLKDGGYVKDGFYEDVLRREEISASVLGGGVAVPHGMANLVEKPAVAIIKTDHKVEWDE 600 Query: 530 EVINHVLIACAAADARHELKIFSY-LASILCQHPAEIIA-GLTGYEAFMELL 579 ++ + + + + F + + A + E ++ Sbjct: 601 GSVDVIFLLALNFEDIQSTRAFFETFYEMTMEKNAAKLIRKAGSKEEIKNII 652 >UniRef50_C0CYQ2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYQ2_9CLOT Length = 639 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 90/637 (14%), Positives = 202/637 (31%), Gaps = 65/637 (10%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + + +K++ +L + T LA VS R+I I +N S GY Sbjct: 3 MKPKMIKLIRILSDYTEFVTASSLAANMDVSTRSIKSYIQEINSVYPEA---IESSREGY 59 Query: 60 QLE-------IFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERL 112 +++ + E + + + +L+ +T L + + + + L Sbjct: 60 RIDKQAARRILEESGTHIPQSSQERIVYIINSLIKSDTSVNTYDLCDEMFISYSTIKNDL 119 Query: 113 PRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF-----LIPLAGIT---- 163 +K + + + + E+ + LL+++L + L + I Sbjct: 120 QAVKSKLRKYDLQLNNNHDNLTVSGLEKNKRRLLSSILYDESNVNFVNLETIQNIFPEIE 179 Query: 164 ------------------------RDNLQHLSTACDNQHRWPLMQGDYLSS--LILAIYA 197 + + H++ A D + D + Y Sbjct: 180 IELIKDSLLEIFDRFHYFVNDYSLINLVLHITIAIDRIRNRNVNTEDIRDMPPISCHEYE 239 Query: 198 LRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD---NVQG 254 L + + Q E Q + L + + A I+ + V+ Sbjct: 240 LARGIARKIEQDFRIEYNQAEVYELALLLISRATAIDYQSITVSNLADFITPECLALVRE 299 Query: 255 LLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 L+ V +++ + + + H+ L R +K + P +D+S+ Sbjct: 300 LISDVNSYYYIDLTEPEFLIRFALHIRNLLQRSKNNYFSRNPLTEEIKTSCPLIYDVSVC 359 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQLAIE 369 + ++E+ I + D + I + LE +N + + + I Sbjct: 360 LSSTIKERTGISINDDEIAYIAFHLGSTLEAQKNLSEKVTAALYCPSYYDTNVKLTDTIS 419 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 R + +I E + L++ L + + T ++ ++ Sbjct: 420 RHFSSELLITNIFTEERELEKTGKNDLVLST--VPLNSVIQLPLLQISPFFTEKDVQSLR 477 Query: 430 HFL-----ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ 484 L + + + F + + R + ++V+ ++ D Q Sbjct: 478 RQLTEIKTNKRRKQFREYLEYLIVPEFFERRDDLTDYDQVVRHMVVKMVSMGYVDEDFEQ 537 Query: 485 RIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA 544 I ARE + AIPH + + + PV+ ++ + VL+ C D Sbjct: 538 DIRAREQLSATAFQD-FAIPHAMKMRAHKTGINVLISDTPVKWGDKQVRIVLMLCFNRDE 596 Query: 545 RH-ELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELL 579 R +IF L +L + + + Y+ F+ +L Sbjct: 597 RFIFNEIFEPLTMVLSSRENVKRLVQAGDYQEFIGML 633 >UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_BACHD Length = 701 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 100/707 (14%), Positives = 218/707 (30%), Gaps = 138/707 (19%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 L++R I+ L EL Q+ VS RT+ D++ +N L + Sbjct: 3 LDQRSTFILTQLLHARSYLPIQELTQKLNVSRRTVYNDLEKINSWLEEQGLKAVYKVRSQ 62 Query: 60 QLEIFERRS-------------FFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 L + ER ++ + ++ LL L + Sbjct: 63 GLILDERAKEEIPTKLRSLKSWHYEYSAQERKAWVVIYLLTRLEPLFLEHLMDRTGVSRN 122 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK-------DPFLIP 158 + + LK L G+ I E + L L + + L P Sbjct: 123 TTIDDIKCLKDELNNFHLALEFERKDGYTISGDETDKRKALVYYLSQALPQQNWETELSP 182 Query: 159 LAGITR-----------DNLQHLSTACDNQHRWPLMQG--DYLSSLILAIYALRNQLTDE 205 + R + LQ + + +Q D L SL L ++ Sbjct: 183 IRIFLRTKRDNGRIFTIEELQKVYDVISESEKVLKIQYTDDVLHSLSLRFLLFMKRVAKG 242 Query: 206 W---------------------------------PQYPGDEIKQIVEHSGLFLGDNAVRT 232 YP +E+ + H + + + Sbjct: 243 KFIKVHPLEKQVLKGTKEYEAAKVMSFKLEQAFGVHYPDEEVLYLTTH----ILSSKINY 298 Query: 233 LTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVE-NITGHLLRCLAAPVWIA 291 G IE + + ++ V ++ A + + +L+E N+ H+ + Sbjct: 299 ANGEIESRKESQEL--THIVTSMVNDFQKYACVVFEEKELLEKNLFFHIKPAFYRIKYGL 356 Query: 292 EHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH----Q 345 E + ++K ++P F ++ + L + + D++ I ++F + R Sbjct: 357 EVENNIAESIKTSYPELFLLTRKVVHYLERYVGKSVNDNEVAFITMHFVGWMRREGTIPT 416 Query: 346 NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYL 405 ++ +I+ ++ + + +E +I S+ E E++ ++ Sbjct: 417 KRKKALIVCANGVGTSQFLKNQLEGLFPAVDIIKTCSIREYEKTPVEVDFIISTT----S 472 Query: 406 LDDAVNNYITVKNIITAAGIEQIKHFLATA------------------------------ 435 + + V I+T E++ + A Sbjct: 473 IPEKNVPIFIVNPILTETEKERLLKSVHVALDELGAMKGYSIEGLMDVIKRHGNVDDEKA 532 Query: 436 ----------------FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHIT 479 +++P+ + WQ + L+ + +T Sbjct: 533 LYQDLRRFFTQPTPIGPKQEKPDLNQLLTEDMIQLREQVTHWQEAIQLAAKPLLLKGMVT 592 Query: 480 ADEAQRIIAR-EGEGENLIV-NRLAIPHCWSE-QERRFRGFFITLAQPVEVNNEVIN--H 534 +++I E G +I+ AIPH E R+ + L +PV +++ + H Sbjct: 593 ESYVKKMIKNIEKFGPYMIIAPHFAIPHAKPEDGVRQLGMSLLWLKKPVTFSSQKGHDVH 652 Query: 535 VLIACAAADARHELKIFSYLASILC-QHPAEIIAGLTGYEAFMELLH 580 V++ A+ D+ LK S L ++ + E + + + M+++ Sbjct: 653 VIVVLASVDSNKHLKALSQLTHLMSKKETMETLMTVHSKQTVMQMID 699 >UniRef50_B9DT71 Transcriptional regulator (Antiterminator) n=1 Tax=Streptococcus uberis 0140J RepID=B9DT71_STRU0 Length = 617 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 78/621 (12%), Positives = 206/621 (33%), Gaps = 46/621 (7%) Query: 2 LNERQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAGY 59 + E+ +I++LL + + +L+++ G+S +T I L+ L I + GY Sbjct: 1 MEEKYFEILELLSEDSYCSSVKLSEKLGISEKTARTRIKELDHQLETFGATITSKRGLGY 60 Query: 60 QLEIFERRSFFQLLQKHDND-------DRLLALLL-LNTFTPRAQLASALNLPETWVAER 111 L + +++ F + + + + D L LL + + +++ L + + + Sbjct: 61 SLVVTDQKQFLESVNRSSKNRSDGDVQDELFRFLLDMEDYQTIDDISAQLYISRSVLTNY 120 Query: 112 LPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL--- 167 L +++ + + +P G I +E + + L D + Sbjct: 121 LKKIEALLKLYDLSIDRKPHYGIKIIGSEANKRTCIQTNNLYPLDDRDLIRKLMDYIIVG 180 Query: 168 -QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPG-------DEIKQIVE 219 Q L+ +S + + Q+ + + D I I + Sbjct: 181 NQKYQVYMSEVAMEALINYIMISISRIKHHFPIEQIKTDRQEISQASQKIISDYINFIFK 240 Query: 220 HSGLFLGDNAVRTLTGLIEKQ-----------HQQAQVISADNVQGLLQRVPGIASLNII 268 + ++ L + + +L RV + +L+ Sbjct: 241 ETKVYFNQYERDYLALQFTSKLASNSLSKFGPNFIISSQIDQLTFEMLDRVYKLLNLDFR 300 Query: 269 DA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPL 327 + +L ++ HL+ + ++ +P + ++ +T+L E + Sbjct: 301 NNLELRMALSQHLVPMDIRLRYNIMLENPLSEQIQKEYPFPYTIASTAVTVLNEFYQKDI 360 Query: 328 F--DSDLIGLYFACALERHQ---NERQPIILLSDQNAIATINQLAIERDVLN-CRVIIAR 381 + I L FA A E+ ++ +++ + + + + + + + Sbjct: 361 SQGEMAYIALIFALATEKRNRDIAKKNILLVCISGTSSSQLFKYKYLQAFGDYINKVYES 420 Query: 382 SLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQP 441 S+S+L + + I + L + I I K F Sbjct: 421 SVSDLDFFDFKGNHIDYIFTTVPLSKKYPIPIYEINLFIDTNDILTYKQFFEEGEKNYLL 480 Query: 442 ERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRL 501 + + + + +++ + + +Q+C + + ++ RE G+ + + Sbjct: 481 DYYST---NLFLPHLKASTKEDALKQMCQHISRYGITPDGFYEAVLQRESLGQTAFGD-I 536 Query: 502 AIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLAS--ILC 559 A+PH + + L +P+ + I + + + L+ F S + Sbjct: 537 ALPHPYKVLTEKSFVCVAILEEPIFWETKEIQVIFLMSIGKEKADSLEEFYKTTSNIMFN 596 Query: 560 QHPAEIIAGLTGYEAFMELLH 580 + + + +E ++ L Sbjct: 597 EEAVKALIETPTFENLLQQLK 617 >UniRef50_C9A5U2 Transcriptional antiterminator n=3 Tax=Enterococcus casseliflavus RepID=C9A5U2_ENTCA Length = 644 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 107/641 (16%), Positives = 222/641 (34%), Gaps = 67/641 (10%) Query: 4 ERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSAGYQ 60 +R ++++L +Q P EL + +S RT+ DI LN L GY Sbjct: 7 QRLDDLMEVLTRQTAPLPMKELTKSFSISERTVRTDIANLNDLLTNVGASIKLIRGQGYL 66 Query: 61 LEIFERRSFFQLLQK------------HDNDDRLLALLLLNT-FTPRAQLASALNLPETW 107 L I + F + + LL LL N L + + Sbjct: 67 LSIGSKERFHDWWTESMSTTESFLTTSEERQAYLLFLLFKNENPLSLDDFLDRLFISKNT 126 Query: 108 VAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 L + + +RP +G + E + +++LL + L G T Sbjct: 127 FYSYLKTARDNLATYQLKIVNRPNIGFEVLGNEFAKRQAISDLLIEKDLQEYLVGFTEME 186 Query: 167 LQHLSTA---------CDNQHRWPLMQGDYLSSLILAIYALRNQL---TDEWPQYPG--- 211 L+ T ++ L+ DY IL+ +AL + ++P Sbjct: 187 LELFDTIDLTRLQELSLNHLAPLDLLDSDYYHKNILSHFALAISRFIAGHQINEFPLHVP 246 Query: 212 --DEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQV-------------------ISAD 250 E Q V L D+A EKQ+ + + Sbjct: 247 ALKEDAQKVVGHFLEEIDHAFDIQLTAGEKQYFIYYLAMNAPRLVETGDASDSSTKTAKA 306 Query: 251 NVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 V+ LL + ++ + D L++++T H+ + + A + ++ ++P A+ Sbjct: 307 IVEELLTAIKQTSNYALETDKMLIDDLTSHIEGFINMNLMDARRSNPLLATIRKSFPQAY 366 Query: 310 DMSLHFITLLREQLDIPLF--DSDLIGLYFACALE----RHQNERQPIILLSDQNAIATI 363 D+ L + + + + I L+ A A+E R+ ++ + I++ A++ I Sbjct: 367 DLCLTHLETVSLKHGFYFSPDEIGYIALHIAGAMERSSIRNHHKHRVILVCGTGRAMSRI 426 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 + I + + + S + + ++ + + + L+ I + Sbjct: 427 IEAKIIKHY-QETIEVVDRFSYVELQQCDLSAIDFVITTV-PLEQFSVPSIYINMAKLDK 484 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEA 483 I +I+ F+ T + F + N + + +++ QL + + D Sbjct: 485 EIGKIEPFIETLSESKDGIYSLFQKAFFLHENHA--DKETLLKKMAQQLYQKDFVPQDFY 542 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN-EVINHVLIACAAA 542 + RE + I LAIPH + +R + V+ N +++ V + Sbjct: 543 DSVKKREAINQTNINEWLAIPHPMTLMAKRSAVSVAIIPDGVDWGNGDLVKFVFLFAIQK 602 Query: 543 DA-RHELKIFSYLASILCQHPAEI-IAGLTGYEAFMELLHK 581 D +I+S L ++ + + I + Y F+ + + Sbjct: 603 DEYEDTEEIYSLLLELMDREDIQQAILQKSDYHHFLSCIKQ 643 >UniRef50_A5CU91 Putative transcription antiterminator containing a PTS domain n=2 Tax=Clavibacter michiganensis RepID=A5CU91_CLAM3 Length = 662 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 96/659 (14%), Positives = 210/659 (31%), Gaps = 83/659 (12%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML+E +++D L + GELA + GV+ R++ + + A AS G Sbjct: 1 MLSENHERLLDYLSTADRWVEAGELADRLGVTTRSVRTYVQAVRE---RSAVSIASSPDG 57 Query: 59 YQLEIFERRSFFQLLQKHDND----DRLLALL----LLNTFTPRAQLASALNLPETWVAE 110 Y+++ D DRL AL+ LA L++ ++ V Sbjct: 58 YRIDAGSYARHLGARPTGDPQGTPRDRLHALVRRLGDAPDGLDVFALAGELHVSDSTVEA 117 Query: 111 RLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDP--FLIPLAGITRDN-- 166 L +++ E R G ++ +E LL+ + R + +PL + R+ Sbjct: 118 DLRKVRALVEDAGLALRRTGSTVVLEGSERDFRRLLSRMFRDESAQGFLPLETVQREFAS 177 Query: 167 ---LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT-------------------- 203 + +Y +L A+ Sbjct: 178 DSLRAFKTDLVRELTEGGFFVNEYGVDNVLLHVAIAIDRLARAPRRTGPGADQDPADDGA 237 Query: 204 ---------DEWPQYPGDEIKQIVEHSGLFLGDNA-----------------VRTLTGLI 237 D P + I + L A VRT Sbjct: 238 PGAAHPTADDASTAAPSADPTAIAIRAVLARLLAAHFDVPVPAGDVAYLALLVRTRVVTP 297 Query: 238 EKQHQQAQVISADNVQGLLQRV-------PGIASLNIIDAQLVENITGHLLRCLAAPVWI 290 + A V+ V+ L V +++ D + HL +A Sbjct: 298 GNEQSLATVMREHVVESDLDVVRAIVRRVKQEYLVDLEDEDFTVRFSLHLGNLVARAADR 357 Query: 291 AEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER 348 + R ++K ++P +++++ + ++ + I + D + I L+ ER Sbjct: 358 SFSRNPLARSIKTSYPMTYEIAVFIASEVQRRRGIAINDDEIAYIALHVGSHRERVARRD 417 Query: 349 QPI---ILLSDQNAIATINQLAIERDVL-NCRVIIARSLSELVAIREEIEPLLIINNSHY 404 + ++ + + I + IE+ + + V + +++ A ++ ++ S Sbjct: 418 DRVACALVCPNYYDLHQIMRQRIEQALGADISVDAVVTRTDVDADALGVQLVIDATGSRP 477 Query: 405 L-LDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQH 463 + V + + I + + + + S + ++ + + Sbjct: 478 PADNVVVVQPLPTPDDIESIRRAVARVRRHARRSSMKHDLLRFLDESLFFRDLYAPNEEA 537 Query: 464 ITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQ 523 + R + ++V Q I + I RE + LA+PH + R + + Sbjct: 538 MIRLLGGKMVEQGIIEPEYIDGAIERERLSSTAFTDTLAVPHSLAMTAHRTAIAIVVNDE 597 Query: 524 PVEVNNEVINHVLIACAAADARHELK-IFSYLASILCQ--HPAEIIAGLTGYEAFMELL 579 ++ ++ V + +A R + +F + I+ + +F+E L Sbjct: 598 AMQWGGNRVHVVALVAFSASGRTSFQHVFDQFVEVFSDHRDVQAIMRASGSHGSFIEEL 656 >UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0J7_9FIRM Length = 708 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 106/681 (15%), Positives = 202/681 (29%), Gaps = 119/681 (17%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 L R I+ LL T +A + GVS RT+ R++ + L + AG Sbjct: 22 LTARMRTILSLLLAASGYVTAEHIAAELGVSARTVTREMHGIETALEPYGVMLLRRTGAG 81 Query: 59 YQL-----------EIFERRSFFQLLQKHDNDDRLL-ALLLLNTFTPRAQLASALNLPET 106 + L L L+ LL+ + LA L++ ++ Sbjct: 82 FMLSGDAAALGHLRTELSLADVHSTLTPDQRRSILIARLLMADGPLKLFTLAHLLHVTDS 141 Query: 107 WVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 V+ L RL+ R L RPGLG +++ E L ++ L + D Sbjct: 142 TVSHDLDRLQPWLAARQITLVRRPGLGVYVEGAERDIRRALVRIIHDYVDEKELLALIGD 201 Query: 166 N-----------------------------------------------LQHLSTACDNQH 178 + + HL+ A Sbjct: 202 DAAEEGPAYAADRALLGLVDPAQIRRIDDAVAAETQDRNIPDSARVGLVVHLALAVRRLQ 261 Query: 179 RWPLMQGDY--LSSLILAIY-----ALRNQLTDEW-PQYPGDEIKQIVEHSGLFLGDNAV 230 + + D L L + ++ + + P EI I H G Sbjct: 262 QGDTIAMDAGTLEELRQTEEFSVAETIAARMGEVFSISIPAAEIGYITMHLLGARG---- 317 Query: 231 RTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVW 289 L + Q +++R + + L+ + HL L Sbjct: 318 ---MTLPSGGGRVDNFRLVQIAQSIMRRASEKSGAPLMRSRTLLTGLVNHLAPALHRLKL 374 Query: 290 IAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE 347 + R + ++ P +++ H I ++ E+ +P+ + + I ++ AL + Sbjct: 375 HMDIRNPLLAQMEEEHPELMEIARHAIPMMEEEAGMPVPNDEVAYIAIHIGAALTEAGGD 434 Query: 348 R---QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHY 404 + ++ + + + R RV+ S S + +E + S Sbjct: 435 HPAARVLVACPTGLGTSRLLASRLRRSYERIRVVGVVS-SLALTAQEILRRSADFVVSTV 493 Query: 405 LLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHI 464 L + V +TAA QI LA + AP F + Sbjct: 494 PLSPLPVPVVVVSVFLTAADRAQIDAVLAGCSVHHADVPADPAPLPFPAVMAEIHRRSGL 553 Query: 465 TRQICAQLVAQHHIT----------------------ADEAQRIIAREGEGENLIVNRLA 502 + Q +++ D A ++ RE ++ Sbjct: 554 ICDLLTDFHLQENVSAASIEQLANAAAHLLLAEDAAAKDFADELLRRERIAPTWAAPQMI 613 Query: 503 IPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA-RHELKIFSYLASILCQH 561 + H ++ R R + LA P+ + L+ A E +I ++A+ + Sbjct: 614 LLHGCFARQERARFGVMHLAHPLPYGGGAVQTALVMLVPAGEAEMERQILGHVAAQIADR 673 Query: 562 PAEIIAGLTGYEAFMELLHKG 582 P F ++L +G Sbjct: 674 P-----------TFADILARG 683 >UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8I8_BREBN Length = 701 Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 114/691 (16%), Positives = 231/691 (33%), Gaps = 125/691 (18%) Query: 3 NERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 + RQ I+++L ++ T G +A+Q GVSGRT+ R++D L+ G Sbjct: 4 SSRQRSIIEILLKEQKGVTVGSIAEQIGVSGRTVHRELDALDSLFEEFELELV-RKTGSG 62 Query: 61 LEIFERRSFFQLLQ-------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 LE+ L+ + L ALL + LA L + Sbjct: 63 LEVVGTDDQKSALRMSVLHHMTKEYTAQERKAIILCALLEASEPVKLISLAIDLKVTTAT 122 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 ++ L L+ R L + G G + TE + ++ L+ + L GI ++N Sbjct: 123 ISHDLDDLETMLARYDLSLLRKRGYGVELQGTESSKRRAISRLIAEHLDDHELIGIIKEN 182 Query: 167 LQ---------------------------------------------------HLSTACD 175 +Q HL+ A + Sbjct: 183 IQNKALRDIDSIAERLLGLIDREKLIKVENALSHLDEELPYPLADSAYLGLVTHLALAME 242 Query: 176 NQHRWPLMQGDYLSSLIL---AIYALRNQLTDEWP-----QYPGDEIKQIVEHSGLFLGD 227 + + D + L Y + + + + + P DEI I H Sbjct: 243 RIEKGEGIHFDEHTLSELNGTPEYEIASNIMERLKQIFQMEIPADEIGYITMHL------ 296 Query: 228 NAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDA-QLVENITGHLLRCLAA 286 L + Q + +Q + + + L + HL L Sbjct: 297 -RGAKLRHSPDDQVWPENTELMVITKRFIQACEERLDIPLSNDASLFHGLLTHLEPALYR 355 Query: 287 PVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQN 346 E R + +K +P F ++ + + +L +P + + ++ ALER ++ Sbjct: 356 LQRKMEIRNPILEQIKQNYPELFAVTSEAVHTILPELRVPDEEIGYLVMHLGAALERTRH 415 Query: 347 ER---QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSH 403 E+ + +++ S + I I++++ + S+ +L + L+I Sbjct: 416 EQQWYRALVVCSSGIGSSKILATRIKKEIPEIVSLKNLSMFDLEEVPATDYDLIIST--- 472 Query: 404 YLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ--------------------PER 443 L Y+ V ++ I++IK+ L T +Q + Sbjct: 473 LPLPLDPAEYVVVSPLLPPDDIQKIKYQLHTTSQKQSHQEKSQPVPAGQQSIEQLRAMQY 532 Query: 444 FFSAPGSFH------YSNVRGESWQHITRQICAQLVAQHHIT--ADEAQRIIAREGEGEN 495 + + + + R + + QI + + I +++I RE G Sbjct: 533 YTAYANELYDGLWGMRWDNRDQDIAQLLSQIIKRQKERGTIEEVEPVVKQLIEREKLGGL 592 Query: 496 LI-VNRLAIPHCWSEQERRFRGFFITLAQPVE---VNNEVINH---VLIACAAADARHEL 548 I LA+ H +E + F L +PV ++ EVI+ +L+ + L Sbjct: 593 GIPGTSLALFHGRNEAVNKASFTFHQLREPVLLRSMDEEVISIDMLLLLLGPKEVPKEGL 652 Query: 549 KIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 ++ S ++S+L + + + + + + Sbjct: 653 EVLSEISSLLIEEEMQAVLKTGETQQIADYI 683 >UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax=Lactobacillus plantarum RepID=C6VLU3_LACPJ Length = 634 Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 76/630 (12%), Positives = 191/630 (30%), Gaps = 64/630 (10%) Query: 7 LKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQLEIFE 65 + I +L ++ ++ + TG S +TI + ++ + +N + G + Sbjct: 13 MIIELILSKRIVHYQDIMEYTGTSRKTIAKYLNEVEKVVNQQGVHLVRKRGQGIRFSGNT 72 Query: 66 RRSFFQL--------LQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQ 117 + + ++ + L + +A + + + L LK Sbjct: 73 KGLLAEFPILKDNSQSEQERRISIMTFLTQQSKPVLLDDIADHFFISRSTLERDLNVLK- 131 Query: 118 RYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQ 177 + L + G + +E ++ LL+ + + Sbjct: 132 -MDYGLKLTATT-EGVKFNSSESDVRRVIGQLLQSYWGQEIKQNQQTGKMTRTFKVPQSL 189 Query: 178 HRWPLMQ--------------------GDYLSSLILAIYALRNQLTDEWPQYPGDEIKQ- 216 R+ Q +Y +L + Q + Sbjct: 190 KRYVNKQTLNQMQKVLNKFVKILKVDVNEYQYESLLIHTTIAIQRIKNGEFITQTTTQNF 249 Query: 217 ----------------IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVP 260 IV + + + + + V+ + Sbjct: 250 DTMAISPSTNKLVKMLIVAFKCEIPDEEIAYLNMHVAAIEDGYIDLDRSGLVERTIVDWL 309 Query: 261 GIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 + D QL+ N+T HL L N +K +P AFD +L + Sbjct: 310 RSVLTD-YDNQLLRNLTLHLRPALVRIKNGISITNPYCNQVKTYFPVAFDQALALAMAIE 368 Query: 321 EQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQLAIERDVLNC 375 +Q + L + + + L+F +ER + + + I+ S A + + + + + Sbjct: 369 KQYHLQLTEDEIAYLALHFESFIERRKVLKPDVELAIVCSTGYGTAELLKQRVMDKLPDV 428 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 +++ S++EL+ + ++ L + I V + + ++ Sbjct: 429 QIVGTLSVNELMTSTVTADIIISTI----PLKMSGTRVIQVSPFLNDQELSLLEKLSQDI 484 Query: 436 FIRQQPERFFSAPG--SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 + F + +N + + Q+ +L ++ +ARE Sbjct: 485 RQEKYTRNAFVKLLSPNGIITNSKATEKKMAIIQLTDRLEKYGYVDNQMQNSALAREQVA 544 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD-ARHELKIFS 552 +I ++ AIPH + + +T + ++ ++E ++ V I+S Sbjct: 545 STII-DKFAIPHGDIDHVLQPTIGIMTSKKGIKWDHENVHIVFFVALNRTVETQMDDIYS 603 Query: 553 YLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 Y +++ + + ++ L + Sbjct: 604 YFYNLIQDGQRMTALIKAQNAQEIIDTLAQ 633 >UniRef50_C4ZB72 PRD/PTS system IIA 2 domain protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZB72_EUBR3 Length = 673 Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats. Identities = 88/668 (13%), Positives = 210/668 (31%), Gaps = 87/668 (13%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA 57 ML+E+ L I++ L + T LA TG+S R++ + + + Sbjct: 1 MLSEKGLLIIEKLAEHNNELVTSKALAASTGMSERSVKTYLKEVADFCEQNSMTLDRKPG 60 Query: 58 GYQLEIFERRSFFQLLQ----------KHDNDDRLLALLLLN-TFTPRAQLASALNLPET 106 F ++L + + + +LL A + LN+ + Sbjct: 61 KGMKPCFSDAQIGKILDVAGRKSAAVSQKKRQNYISYILLSGWDTYTYALFSEELNVSKN 120 Query: 107 WVAERLPRL-KQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 + + + L + + G G + +E + + R + Sbjct: 121 VIMDDINELDAELLLFGIKVHRTAGYGIYATGSELDIRKAMRHFCRYPISDKQVIKTDDH 180 Query: 166 NLQH------------------LSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWP 207 L + + R+ ++ DY ++ A+ D Sbjct: 181 RLSRRAAEVIANNFRSVNLSMAVDMIHHVERRFDIIFTDYTFQMLAEYIAIALFRVDVEK 240 Query: 208 QYPGDEIK-----------------------------------------QIVEHSGLFLG 226 + DE+ + H G+ L Sbjct: 241 ELKTDELDLSNRICDAASDGDAGTETEQQVQKNGFVMIEHENMAKEAAGFLERHHGISLS 300 Query: 227 DNAVRTLTGLIE-----KQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLV-ENITGHL 280 + L L + + + ++ + + + N+I+ +L+ E++ L Sbjct: 301 QPEIMYLAMLFSCAEGQNRVVMSCEEALSIEDEMIVYLSNLLAANLIENELLRESMRSFL 360 Query: 281 LRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFA 338 +A + E ++++ ++ + F + + +++ I L Sbjct: 361 PGSIARTHFGIEIDNPFLSDITQSYASLFTVCFTVSRYYEKYTGAMPSENEIAFIALQVG 420 Query: 339 CALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLI 398 AL R+ + +++ + A +I IE V + R++ S + I E L++ Sbjct: 421 GALHRNPMTVRAVLIGAAGYATGSIIAGKIENRVPDVRIVSILSSDRIEHIDEYDCDLIL 480 Query: 399 INNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ---PERFFSAPGSFHYSN 455 ++ V +I+A + I++ Q E F Sbjct: 481 STIDTRADIHKDMRFLYVSPLISAQDEKNIRNKCFELMTGQSAEVSEFSQMLSEEFIIFE 540 Query: 456 VRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFR 515 + ++ + + ++ C L+ + + ++ A+ ++ RE + +AIPH E R + Sbjct: 541 KKAKNRKDVLKRACQLLINKGIVQSEFARDVLEREKVEATAVGCNIAIPHGKPEHVNRCQ 600 Query: 516 GFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYE 573 I L +P+E + + + + D+ + K F + + L + + Sbjct: 601 ILVIRLDKPIEWGERMADMIFLLAINFDSVNTTKAFFHDFTKLLNENGATDRLREAASPH 660 Query: 574 AFMELLHK 581 + K Sbjct: 661 ELCAAIRK 668 >UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Clostridia RepID=B0K247_THEPX Length = 705 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 104/702 (14%), Positives = 216/702 (30%), Gaps = 128/702 (18%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 LNER +I+ L P +LA+ VS RTI D+D ++ L Sbjct: 9 LNERCTQILIRLINSNAPIKISDLAKIFNVSSRTIRYDLDTIDEFLKYNNLPQLIRKPNV 68 Query: 60 QLEIFERRSFFQ---------------LLQKHDNDDRLLALLLLNTFTPRAQLASALNLP 104 ++ E + L QK + L L+ + +A L + Sbjct: 69 GVKFSELLEYRNKVLSLLDNLNIYYYNLSQKERVNIILSELIQQKDYITINSIADKLMVS 128 Query: 105 ETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT 163 + + + L +++ L S P G + E++ LL + + I Sbjct: 129 RSTIIKDLKDVREWLTRHGLQLKSAPKYGIKVVGDEKRLRRAAIELLTEAIDVDKALDIV 188 Query: 164 RDNL---------QHLSTACDNQHRWPLMQGDYLSS----------------LILAIYAL 198 + + + ++ ++ + + ++ + +AI Sbjct: 189 KSPIYTRSSVGIDKQITKLFEDIDIPYIEECIQIAERELETVFSDAAFSGLVIHIAIAIK 248 Query: 199 RNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD-------- 250 R QL + P +E+K + + N + L + ++ Sbjct: 249 RIQLGKDII-MPKEELKALEITKEFAVASNIAKMLEDHFKVSIPLDEIGYITVHLLGSNV 307 Query: 251 ----------------NVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEH 293 + ++ V ++ D QL E + HL + + Sbjct: 308 SKTRPYPNENWVEYQLLTEKIITNVTNKIHQDLSGDRQLFEGLLDHLRPTVYRLKHGLKL 367 Query: 294 RQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN----E 347 + ++ +KA + F++ + L + L D + ++F A+ER + + Sbjct: 368 KNPILDEIKANYKELFEIVKESLKPLEDYTGKALNDEEIGYFTIHFGAAIERLKVTKAPK 427 Query: 348 RQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLD 407 +++ A + + + V + ++ A + ++ +E + LI++ + Sbjct: 428 PNILVVCGTGIGTAKLLSSRL-QSVFDVNIVDAVAYHQVKERLKEKDIDLIVSTVPIPYE 486 Query: 408 DAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFS--------------------- 446 I V ++T IE +K + ++ Sbjct: 487 G--IKTIEVNPLLTEKDIELLKDLVIKPKLQGTVINDLIKIIEKHCVIGNREKLIEDLSK 544 Query: 447 ---------------------APGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR 485 NV + W+ R L I Sbjct: 545 FLNVASYENTRGVVQPVLKDLLTKDTIKLNVEAKDWEEAVRIGGELLEKSGAIEPRYIDA 604 Query: 486 IIA--REGEGENLIVNRLAIPHCWSE-QERRFRGFFITLAQPVEVNNE---VINHVLIAC 539 +I +E +I +A+PH E ++ ITL PV N+ + V+ C Sbjct: 605 MINTVKEIGPYIVIAPGIAMPHARPEAGAKKIGMSLITLKNPVNFGNKENDPVKIVVSLC 664 Query: 540 AAADARHELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELLH 580 A D LK S L +L ++ + I E + L+ Sbjct: 665 A-IDHSSHLKALSELVELLGDENTVKTICEANDVEEVVNLIK 705 >UniRef50_B9Y3X0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3X0_9FIRM Length = 648 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 94/643 (14%), Positives = 203/643 (31%), Gaps = 72/643 (11%) Query: 5 RQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 R+++IV L Q T +AQ+ G S R++ + LN + S + GY+++ Sbjct: 6 RKMQIVSFLNHQTGWTTTAMIAQRFGFSVRSVKYSVAELN---KEYGALILSSNKGYKID 62 Query: 63 IFERRSFFQLLQ--------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 + L + + LLL N + L+ L + + L R Sbjct: 63 KLKAAQILSFLPSQTIPASYEERKRYIINTLLLQNQRMSISDLSDKLCISPITLQNELSR 122 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKD--PFLIPLAGITRDNLQ-HLS 171 ++ + I + + ++ +L+ ++ L I L+ Sbjct: 123 MRTDLMQFHLNIHTKNDMVNITGLAKDKRAVILSLINEEIKSSYFSLERIQEIFTSVSLA 182 Query: 172 TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGD---- 227 + +L L Y L LT E + D Sbjct: 183 RIKQLILQVMHKYEYFLDDYSLLNYVLHIALTVELRSSNPARKFNASRQELVSHADMLNL 242 Query: 228 ------NAVRTLTGLIEKQHQ----------------------------------QAQVI 247 + V L L+++ + Sbjct: 243 ASAHVQSIVNDLYVLLKENYDTDFTLYDLYEASVLMMTRAVSSQMSAIAYDQISVILGAD 302 Query: 248 SADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 + ++Q V +++ + + HL L + ++K +P Sbjct: 303 IQRLLDNIVQSVENTYCIDLNNESFLIKFAFHLKNLLLRLENDIQITNLQFESIKTDYPL 362 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQ 365 + +S+H ++ + L + + I L+ +E + + I L N I Q Sbjct: 363 IYAISVHISNVIYQFTGHVLPEDEIAYITLHIGVLMEETRAKSDKISCLVLCNDYQQIGQ 422 Query: 366 LAIERD--VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 I++ V + ++I+ L+ + L+++ + L Y + ++ Sbjct: 423 RLIKKLSAVFSESLLISDVLTHTALPQPLPPADLVLSTAPCALQVQPLVYYQIDQFLSEK 482 Query: 424 GIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQ-----HITRQICAQLVAQHHI 478 I +I + R+ + F + ++ Q +CA + A ++ Sbjct: 483 DIRRIFELIDEIKKRKMKDFIREKILYFFHPDLFFACRQFATHTDAIEVMCAAMTAGGYV 542 Query: 479 TADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA 538 D Q+I E + N +AIPH + + +P++ +N V + Sbjct: 543 DEDYRQQIDYHEKLSPSAYGN-IAIPHPLDNKAKSSAIAVSVNPRPIQWGANQVNLVFML 601 Query: 539 CAAADARHEL-KIFSYLASIL-CQHPAEIIAGLTGYEAFMELL 579 + + IF ++ I+ + + +T +E F LL Sbjct: 602 SLMEKDKEQFSNIFDFIVHIMKDEETFRKMMEVTSFEEFTSLL 644 >UniRef50_B1C796 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C796_9FIRM Length = 658 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 96/646 (14%), Positives = 218/646 (33%), Gaps = 69/646 (10%) Query: 5 RQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLN-GKARIFASGSAGYQL 61 RQ I+ +L + +A++ G++ RT+ DI +N + I +S GY+L Sbjct: 12 RQKNILKMLLSEDGWIKGSRIAKEMGITDRTVRSDIAAINSAMEGSSNIIESSRQNGYRL 71 Query: 62 EIFERRSFFQLL--------QKHDNDDRLLALLL---LNTFTPRAQLASALNLPETWVAE 110 + + +LL + L L+ + +LA L + + Sbjct: 72 KSSDSELLNKLLFNKKNLPITPEERLRYLSIRLMQVDESNPKKLWELADELAISMPTLES 131 Query: 111 RLPRLKQRYE--RTCCLASRPGLGHFIDETEEKRVILLANLL-----------------R 151 + +++ E + + R + EE R LL L+ Sbjct: 132 TIQKIRGVLENRKDPFVIQRKQGFIWTKGHEESRRFLLKELILDRMDPSYLMISNYYNYF 191 Query: 152 KDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILA--IYALRNQLTDEWPQY 209 L + G +L+ + ++ L+ + ++ + + Sbjct: 192 DKHILETIMGCIMTSLKEFGSIMTDEDIIHLVVYLAIKHNRISTGHSLIMQKSETYSIND 251 Query: 210 PGDEIK-----QIVEHSGLFLGDNAVRTLTGLI--------EKQHQQAQVISAD-----N 251 P ++ + + GL L D + L + K+ ++ S Sbjct: 252 PKSKLAFKIADNMKDKLGLHLNDAEILDLIIQLSLMRVVTENKKDKEINNGSDKNHFMAI 311 Query: 252 VQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 V LL + L++ D +L + H+ + + + LK + F+ Sbjct: 312 VDSLLNDIKDNFGLDLSNDEELRVGLCSHIKYMIKQKSELQSSSNPILGLLKTEYSFVFE 371 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ-----PIILLSDQNAIATI 363 MSL+ + D+ L + + I Y A+ER ++ ++ + + +T+ Sbjct: 372 MSLYLYECFYDMFDVKLNEDELGYITAYLGAAIERMESNMSHNSICIALVSNTNHGTSTL 431 Query: 364 NQLAIERDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 I+ + ++ S L I ++ +I S Y+ DD + + ++ + Sbjct: 432 LMARIKSKFSDKFNLVGPYSAYSLDEIMKDNPSGIITTASKYMFDDCHLPVVKISPMLDS 491 Query: 423 AGIEQIKHFLATAFIRQQPER-----FFSAPGSFHYSNVRGESWQHITRQICAQLVAQHH 477 I I +A+ + F + N++ + ++ ++ L + + Sbjct: 492 NDITAINSMVASIKNKTLSNPLPYGLDSYFDKKFFFKNLKADDYEEAITKMTEALEREGY 551 Query: 478 ITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLI 537 + +D + + RE N LA+PH + L P++ N + + + Sbjct: 552 VKSDFLDKTLEREKISFTTFGNLLAMPHPLESCSNQTIISVGILEHPIKWGNVFVQVIFL 611 Query: 538 ACAAADARHELKIFSYLASILCQHP--AEIIAGLTGYEAFMELLHK 581 + ++ + L +P + YE F+ +L + Sbjct: 612 MSIRKEDLKYIRHLFNITVELANNPERVTRLILSKDYEHFISILRE 657 >UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1J6_ERYRH Length = 641 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 86/620 (13%), Positives = 197/620 (31%), Gaps = 62/620 (10%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 L +RQ I+ L+ T ++A + +S +T+ R++ ++ L + S G Sbjct: 3 LTQRQNSILLLIINAHDAITSDDIATELNISSKTVQREVQAIDSILKKRNMAITSLRGKG 62 Query: 59 YQLEIFERRSFFQLLQKHD-------------NDDRLLALL----LLNTFTPRAQLASAL 101 Y ++ + ++ +D + ++ + L T+ LA L Sbjct: 63 YLIDDSHKNEMWKTYFYNDEFDNNVLPNVRQSRVEWIIRKIANGTLNGTYFTLEALADNL 122 Query: 102 NLPETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + + + L +++ E L + G + E L+ + L + I + Sbjct: 123 FISLSTLKRDLVSVRRILREYHIFLENDYKRGLVLTGDENSIRRLINDYLVLEKSTIDIN 182 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT------------DEWPQ 208 I N + +L+ + ++ ++ + Sbjct: 183 RIIGQNTPRMDIIERIIVTCIQKYQLHLTDIGFKNLSIHIEIALTRIEQGKLGLSNTTTS 242 Query: 209 YPGDEIKQIVEHSGLFLGDN---------AVRTLTGLIEKQHQQAQVI---------SAD 250 D + + + + + + + Q + + + Sbjct: 243 INTDSNAYLCAEALAVMLEEALTLKIPESEIINIYIHLSSQKKLHTDVDNINSESPHNLQ 302 Query: 251 NVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 + L + I + D L + + HL L R ++ ++ +P Sbjct: 303 ILNEALDDIYRIYGSDFRHDEILKQGLMTHLESALKRIELGLSIRNELLDEIEKNYPFEI 362 Query: 310 DMSLHFITLLREQ--LDIPLFDSDLIGLYFACALERHQNERQ-----PIILLSDQNAIAT 362 ++ + + L + + L+F A ER + + + I++ + A Sbjct: 363 QIAKVLAFHFLKTNAIAFNLDEVGFLALHFCGARERARQDEKSETTRAIVVCTTGVGTAM 422 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + + +E + I S + + + L+I+ H + V + V I+T Sbjct: 423 LLKAKLESQFGDALEIKKVSALYQLDKHDMDDVDLLISTVHIDRNLGVPTVV-VSAIVTD 481 Query: 423 AGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADE 482 I IK ++ F N +S Q + + + + +I Sbjct: 482 RDIAHIKRYIKGNPSNSHSVADLFDEKLFIV-NPDTQSPQELLEMMSQKALTLGYIDKAC 540 Query: 483 AQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAA 542 + II RE G + N + IPH R L +P+ + + +L+ Sbjct: 541 QESIIEREALGSTEVGNLVCIPHNIEGSVYRPSIVVCVLDKPIPWKYDHVQLILMILIDQ 600 Query: 543 DARHEL-KIFSYLASILCQH 561 D R +F+ L S + Sbjct: 601 DHRTHYSDLFAELYSEIDHQ 620 >UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFF6_9BACI Length = 643 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 93/636 (14%), Positives = 219/636 (34%), Gaps = 58/636 (9%) Query: 1 MLNERQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 M++ER K++ + + + ELA+ GV RTI I LN LNG A F G+ Sbjct: 5 MIDERAAKMLAIARTKTYHSLDELAEAMGVGTRTIRNYIKQLNEDLNGIASFFNERGKGF 64 Query: 60 QLEIFERRSFFQLLQKHDNDD------------RLLALLLLNTFTPRAQLASALNLPETW 107 + +I ++F L++ +D + L+ LA ++L T Sbjct: 65 RFDINNMKAFQSYLEESSPEDSSLNSQKGRIGFIIDRLINSEETYTLDDLAEEMHLGRTT 124 Query: 108 VAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVI-LLANLLRKDPFLIPLAGITRD 165 + L + E + +P G + E +L +L PL + Sbjct: 125 LVNELKKAAVSLETYKLIIHGKPNRGMELSGRELDLRFYILDHLYDVLYGDYPLDEDITE 184 Query: 166 NLQHLSTACDNQHRWPLMQGDYL---------SSLILAIYALRNQLTDEWPQYPGDEIKQ 216 +++ +S + + +++ + + AI +L EI + Sbjct: 185 SIERISHEYNLESPTQERLMEFIIIMLDRLLKNHHLEAIEEKHKKLIGTQEHGIALEIVE 244 Query: 217 IVEHSGLFLGDNAVRTLTGLI-------EKQHQQAQVISADNVQGLLQRVPGIAS----L 265 ++ A + A + D+V+ LL+++ + Sbjct: 245 AIQKQLPIEIPEAEALFITIPIAGRRTPTNNRTLADIAITDDVRRLLEQILEQVGFKKEI 304 Query: 266 NIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 + +++ HL L ++ + + + N+K +P A+ M+ ++ + + Sbjct: 305 IEQNESFFQDLLYHLTFMLNRLIFGLRLKNALLANVKEKYPVAYKMAEISGQVIESRYGL 364 Query: 326 PLFDSD--LIGLYFACALERHQNE----RQPIILLSDQNAIATINQLAIERDVLNCRVII 379 + + + + YF + + + ++ ++ A + + +ER + I Sbjct: 365 EVPEDELGYLAFYFGVFIGQSDIKVKRFQKAAVVCGTGRGTAKLVSIQLERILNQDTEIN 424 Query: 380 ARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF-------- 431 +E A++E ++ ++ ++ L + +I + I + +++ Sbjct: 425 L--FAEKDAVKEVLDSYDLVFSTVKLPFETHAPFIMINEIFDESRVKREIEKAAYRQRLN 482 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + Q A SF + +++ + +L + +R+ RE Sbjct: 483 IQNGSEYQSVMAQLLAKESFFQLDSSKGYHENVF-HMVNELTEIGRLDLGFLERLKEREE 541 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARH----- 546 +G + +A PH +++Q + V N + V + + Sbjct: 542 KGSMVFDRYIAFPHTFNQQSNDIELAVGIFPEGVMENGREVRLVFLLGLPEEQNECNESL 601 Query: 547 ELKIFSYLASILCQHP-AEIIAGLTGYEAFMELLHK 581 +KI+ + I + YE F+ + + Sbjct: 602 IVKIYDEIIGIANNEELIAQLVEAASYEDFVSSIER 637 >UniRef50_Q3CZS6 MW0309, putative n=3 Tax=Streptococcus agalactiae RepID=Q3CZS6_STRAG Length = 629 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 87/633 (13%), Positives = 209/633 (33%), Gaps = 56/633 (8%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML RQ+K++ +LE Q + G+ A++ G+S RTI +I L + +I + G Sbjct: 1 MLTSRQVKLLKILESEQSYQPIGKFAKELGISDRTIYSEIKLL---IEEGYQINSKRGKG 57 Query: 59 YQLEIFERRSFFQLLQ------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERL 112 +L +L + + + +LL + L+ + +T + L Sbjct: 58 IKLVNQRGFDDRPILNISTDPAETRRIEIMKSLLFDHATVTLKGLSDHYFVSQTSIKNDL 117 Query: 113 PRLK-QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIP-----------LA 160 ++ ++ + G I++ + IL+ + + Sbjct: 118 KFIEGTLFQNNLSFLNSNKSGTKIEKMPLDQKILVLFNFNQYIMTFKANLGNDIFEDRID 177 Query: 161 GITRDNLQHLSTACDN------QHRWPLMQGDYLSSLILAIYALRNQLTDEWP------- 207 +T + + C N + + Y+ SL+ +QL Sbjct: 178 SLTEYYSSEVISVCKNVLYTFIRSNVMTILDTYIESLLNIYIIFVSQLLTGNHFEKTINP 237 Query: 208 ----------QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQ---AQVISADNVQG 254 + + G ++ + L+ ++ + Q V Sbjct: 238 LDKKHHAFYVSTAVTLLHKASLRLGFEYTNSDIEYLSQMLLNYRFEPIPVQQNDDKFVTA 297 Query: 255 LLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 LL+ V S+N D L + ++ H+ L + + + +K + +++ Sbjct: 298 LLEDVSKAMSINFLEDQYLFDQLSQHIPAMLYRLKYHTHIQNPFTDKIKLEFAITYNVLW 357 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERD 371 + L ++LD+ + + + +YF ++E+ R+ +I+ + + I++ Sbjct: 358 LVLQDLGQELDVVFNEDEVAYLTIYFQLSIEKIGKSRKILIVCQTGIVTSELLINRIKKV 417 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 V + + SLSE+ ++ L + + + Sbjct: 418 VPSLDQVEIASLSEMYEKDLTCYDFVLTTIETNLDLPNLYYVSPFIKNEEITQLLTGNPY 477 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 I ++ + + N ++ + + + LV ++ + ++ RE Sbjct: 478 SNNVTIGKKDQIEANYY--IPMLNQDFKTKEELLNSVGQNLVEMGYVQKEFVASLLDREK 535 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELK-I 550 G +A+PH E + FI ++ +++ V + + D +K I Sbjct: 536 MGSTEFPLGVALPHGRPEFVLKTVVVFIQNTHKIKWKESLVDTVFLIALSRDDIKNVKDI 595 Query: 551 FSYLASILCQHPAEIIAGLTGYE-AFMELLHKG 582 + + E +LL++ Sbjct: 596 ILKINKTISNEEVLRQLKSETRELEVYKLLNQA 628 >UniRef50_UPI000196BD9B hypothetical protein CATMIT_02553 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BD9B Length = 639 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 93/633 (14%), Positives = 210/633 (33%), Gaps = 56/633 (8%) Query: 4 ERQLKIVDLL-EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 +R I + + T +LA VS RTI DI+ LN L G + AGY LE Sbjct: 5 KRIEDIFNYIRSNDYTTAAKLADLFKVSDRTIRTDINNLNNELQGASV-QLKRKAGYYLE 63 Query: 63 IFERRSFFQLLQ---------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 I + F L + L LL + + LA ++ + + Sbjct: 64 IEDEEKFNSFLDSITSKESDIVDLDSSEDRIHFILNKLLYSHDYISADDLADSVYVSKNT 123 Query: 108 VAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANL------LRKDPFLIPLA 160 + + +K+ +PG+G I E + + N Sbjct: 124 FSNYIKIIKKSLPLYNLEYIVKPGVGIKIIGNESDKRDCIINETHPLNEYSTVSTFSKGE 183 Query: 161 GITRDNLQ---HLSTACDNQHRWPLMQGDYLSSLILAIYALRN---------------QL 202 I ++++ +S + ++ + DY + +AL ++ Sbjct: 184 KIYYNDVEVNYIVSLLINVFNKHKIQTDDYKLKNLTTYFALMISRILNDDYISVMNNTEI 243 Query: 203 TDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD-----NVQGLLQ 257 + + + + + ++ + + + ++ + D + L+ Sbjct: 244 PNNIKEIMNEICESLSDYYDITITRGEKQYISLHFISNIKYNNNSIDDQSIHNLIDSFLE 303 Query: 258 RVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 + + ++ D + L ++ H ++ E++ +N +K +P F++S + Sbjct: 304 GIYKGYNFDLRDDKILRSDLFYHFRTSISMMELHLENKNPLLNTIKTNYPLPFEISKTIL 363 Query: 317 TLLREQLDIPLFDSDLIGLYFACALER----HQNERQPIILLSDQNAIATINQLAIERDV 372 + + P D I L+ A+ER ++ ++ A A + + + Sbjct: 364 SQSSNIITFPEDDIGYIALHIGAAIERCFSGSIKKKAVYLVCGSGQATARMLEARLHNVF 423 Query: 373 LN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 N V+ SL E + E + S L+ + ITV + IE + Sbjct: 424 ANKLTVVKRLSLIEYLNCTENDFKEIDCVISTIPLEQSYVPTITVDFSLNQQDIEMVSRL 483 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + + + + S + S + ++ L+ + I D + RE Sbjct: 484 ITSIDQSKYEKIKKFFDSSLFVHKKKVNSKNELLEELSTLLLNEDIIGDDYLDSVYKREE 543 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHELKI 550 + + A+PH + ++ + L +P++ +E + V + ++ Sbjct: 544 LSNTNMNDVFALPHPLNVFAKQTKVAVAILDEPLKWNGDETVRIVFLLAIKNGDSLNMEH 603 Query: 551 FSYLASILCQ--HPAEIIAGLTGYEAFMELLHK 581 + L + Y+ F++ L + Sbjct: 604 LYDVFIELVNNTKFQREVMCSKTYDQFIKTLIQ 636 >UniRef50_C0ES87 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES87_9FIRM Length = 634 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 96/629 (15%), Positives = 216/629 (34%), Gaps = 53/629 (8%) Query: 3 NERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQL 61 + RQ I+ +L + LAQ+ GVS RT+ DI +N L + + L Sbjct: 7 DNRQANILSVLRKNSALNIEMLAQRFGVSERTVRNDIKDINRELKNSGLVEINQGK-CSL 65 Query: 62 EIFERRSFFQLL------------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 +F+ R F + + L+ +A +N+ + + Sbjct: 66 RVFDTRDFQNAYARIIETDDLMNSSQKRQEYVFAKLMRAMEPVLTDDIAYEMNIGRSTLI 125 Query: 110 ERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVI-----LLANLLRKDPFLIPLAGIT 163 L +L+Q E+ + + G + +E L ++ + P + G Sbjct: 126 SDLKKLRQTMEKYELEIVGKTSKGLALGGSELNIRKFVMENLFGSIYQNYPQDELMLGKI 185 Query: 164 RDNLQHLSTACDNQ-----------------HRWPLMQGDYLSSLILAIYALRNQLTDEW 206 R+ + + Q H M Y + + ++ ++L D+ Sbjct: 186 REAMAEKNFEESTQKMFENYMTLMFDRFLTGHVITRMPEKYYNLVSRNSFSFVDELIDDI 245 Query: 207 PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLN 266 + EI I E +FL +RT + +Q +++++ +++ Sbjct: 246 SKEFYIEI-PIEEKIFVFLPIIGMRTPADSKNMYSIELDEKIRPLLQKIVEQIRQELNIS 304 Query: 267 IIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIP 326 I + E H++ + + ++ +P AF M+ +++E ++ Sbjct: 305 IDTHEFTEKFMYHIMFMINRLRYNVHIDNPMFEDIHYKYPLAFKMAEIAARVIKEDAEVV 364 Query: 327 LF--DSDLIGLYFACALER---HQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIAR 381 + + + YF LE +Q +++ ++ A + + I + V + + Sbjct: 365 VTQAEMGYLAAYFGVFLEVNTLNQKQQKIAVISDKGRVTAQLFAVQIRKVVDSSSQLDIL 424 Query: 382 SLSELVA-IREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ 440 S SE V+ I ++ + ++ + V + + + F Sbjct: 425 SPSEAVSGILDQYDIVICTTEHIIECECPVIYIHEIFDENELKNKLRQAKFCKGTDAAIL 484 Query: 441 PERFFSAPGSF----HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENL 496 + ++ ++ E + I L + ++ AD +R+ +E Sbjct: 485 DDNWYVMANILKEDTFFNLSEQEDYTSALNYIIDTLEKRGYVDADFKERVWEKESRSSMT 544 Query: 497 IVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKI---FSY 553 I N +AIPH + +P+ + I + + + R E ++ + Sbjct: 545 IDN-IAIPHAVQKAGDSIVLSVGVFRRPMPYKEDNIQIIFLLALPEEIRDENRLVCVYDE 603 Query: 554 LASILCQHP-AEIIAGLTGYEAFMELLHK 581 + S++ E I Y FM++L+K Sbjct: 604 IMSLVKNDEMIEKITQSENYIDFMKVLYK 632 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 42/369 (11%), Positives = 103/369 (27%), Gaps = 20/369 (5%) Query: 73 LQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLG 132 L + +L++L N+ LA + E V + + + + + + G Sbjct: 4 LFGDNRQANILSVLRKNSALNIEMLAQRFGVSERTVRNDIKDINRELKNSGLVEINQGKC 63 Query: 133 HFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYL--SS 190 A ++ D + L A + + + S+ Sbjct: 64 SLRVFDTRDFQNAYARIIETDDLMNSSQKRQEYVFAKLMRAMEPVLTDDIAYEMNIGRST 123 Query: 191 LILAIYALRNQLTDEWPQYPGDEIKQIV-----EHSGLFLGDNAVRTLTGLIEKQHQQAQ 245 LI + LR + + G K + + F+ +N ++ + Sbjct: 124 LISDLKKLRQTMEKYELEIVGKTSKGLALGGSELNIRKFVMENLFGSIYQNYPQDELMLG 183 Query: 246 VISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAW 305 I + + N + +TGH++ + + R S Sbjct: 184 KIREAMAEKNFEESTQKMFENYMTLMFDRFLTGHVITRMPEKYYNLVSRNS--------- 234 Query: 306 PAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQ 365 F I + ++ I + + I ++ R + + + + I + Q Sbjct: 235 ---FSFVDELIDDISKEFYIEIPIEEKIFVFLPIIGMRTPADSKNMYSIELDEKIRPLLQ 291 Query: 366 LAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI 425 +E+ + + I ++ + +D+ + I K + Sbjct: 292 KIVEQIRQELNI-SIDTHEFTEKFMYHIMFMINRLRYNVHIDNPMFEDIHYKYPLAFKMA 350 Query: 426 EQIKHFLAT 434 E + Sbjct: 351 EIAARVIKE 359 >UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXJ3_9BACL Length = 696 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 88/684 (12%), Positives = 194/684 (28%), Gaps = 120/684 (17%) Query: 17 PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GSAGYQLEIFERRSF----- 69 + EL VS RTI D+D +N L G+ L R Sbjct: 8 YLSVQELMDVFHVSKRTIYYDMDKINHWLRQGGLAPVQYVRGRGFLLPEASRSQLPSMAQ 67 Query: 70 -----FQLLQKHDNDDRLLALLLLNT-FTPRAQLASALNLPETWVAERLPRLKQRYERT- 122 L + L L+ + + + L + L RLK+ E Sbjct: 68 SVQPQQYYLSSGERKALLCLRLVNRSTPLFLHDMEALLQVSRGTAHAELKRLKKELEDYA 127 Query: 123 CCLASRPGLGHFIDETEEKRVILLANLLRK-------DPFLIPLAGITRDNLQH------ 169 + G+FI E+ +L+ L + +P G+ +L Sbjct: 128 LSIQFDRKQGYFIQGNEKDIRAVLSRFLFEQLSYADWNPSSPAFDGLIHTDLFRRHFPAF 187 Query: 170 --------LSTACDNQHRWPLMQGDY-LSSLILAIYALRNQLTDEWPQYPGDEIK----- 215 + + + D + L L I+ N++ +E K Sbjct: 188 REEELDSVYRIIVSTEQQIGMEWTDETILHLTLRIWLSANRMKQGRTVQLEEEEKAALRE 247 Query: 216 ------------QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN---------VQG 254 ++ E L + ++ + L + + +D + Sbjct: 248 TLQFKAATQIADELGERFDLRVPEDEIGYLAIYLLAAKVNRVEVESDTWETKRLRAATEE 307 Query: 255 LLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 ++ + + + LV+ + H+ + + + + ++++ Sbjct: 308 VIDLFAKNGCVYFQNREALVKQLFLHVKSMFYRIKYGLTIDNPLTDKILEEYREVYELTR 367 Query: 314 HFITLLREQLDIPL--FDSDLIGLYFACALERHQNE----RQPIILLSDQNAIATINQLA 367 + L + PL + + ++F L+R Q + ++ ++ + + + + + Sbjct: 368 KSASPLERLFEKPLGRHEIAYLTMHFGGWLKREQAKTEHRKRAAVVCVNGVSASRLLKNQ 427 Query: 368 IERDVLNCRVIIARSLSELVAIREEIEPLLIINNS------------------------- 402 +E+ + ++ SL E + ++ + Sbjct: 428 LEQLFPSLDLVAVLSLREFEKFTDPVDLIFSTVPLSGCQVPVFILNAVMSDAEKTHLLSR 487 Query: 403 ----------HYLLDDAVNNYITVKNIITAAGIEQIKHFLAT----------AFIRQQPE 442 A V + E + + +P Sbjct: 488 VNPYLGVAEGSSAFPAAQEIVDLVSQHVAIPDREALLRDIQRYLSSTKVQPPKSKENKPT 547 Query: 443 RFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EGEGENLIV-NR 500 S + W+ R L+ + IT Q +I + G +I Sbjct: 548 LADLLNPSRITIREQALGWREAIRLAAQPLLQEGTITDGYVQAMIDYIDRYGPYIIATPG 607 Query: 501 LAIPHCWSE-QERRFRGFFITLAQPVEVNNEVINHV--LIACAAADARHELKIFSYLASI 557 +AI H E R + + V +++ + V + D + LK + LA++ Sbjct: 608 VAIAHARPEDGAVRASISLLVIRDGVPFSDQPNHLVNLIFVMVGVDGQFHLKALTQLANL 667 Query: 558 LCQHPAEIIAGLTGYE-AFMELLH 580 L + + G T + M L Sbjct: 668 LMEERNRHVLGSTDDKAEMMHLFQ 691 >UniRef50_B3W7W3 Transcriptional activator n=4 Tax=Lactobacillus casei group RepID=B3W7W3_LACCB Length = 636 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 88/638 (13%), Positives = 210/638 (32%), Gaps = 63/638 (9%) Query: 1 MLNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 MLN Q +++ LL QP T +L+++ G S RT + +N + S G Sbjct: 1 MLNNNQQRLLQLLFESNQPLTANQLSEKLGCSVRTAKTYVAQINRLAAEP--LILSSRQG 58 Query: 59 Y--------QLEIFERRSFFQLLQKHDNDDRLLAL-LLLNTFTPRAQLASALNLPETWVA 109 Y QL I + D ++ ++ L +L + + Sbjct: 59 YVALKTEAKQLLISTNNASDIPQTFRDRAFYIIKQSMIHKAQLDVFDLEESLFVSYGTLK 118 Query: 110 ERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKD------PFLIPLAGIT 163 + ++ Q + ++ + E+ + L+++ + ++ + Sbjct: 119 NDIQKINQMFSKSGVRVVIRDNKIQVTGNEKDKRRLISHFIMEEAPHHFVDRSLLTQNFN 178 Query: 164 RDNLQHLSTACDNQH-RWPLMQGDY-LSSLILAIYALRNQLTDEWPQYPGD--------- 212 R +++ + + L DY L +L++ + + L + D Sbjct: 179 RTDVEQIEQIIKEELAPSTLKLNDYALINLMMHLLIMIQSLHHDDTLLSRDAYSSWLNTY 238 Query: 213 -------EIKQIVEHSGLFLGDNAVRTLTGL---------IEKQHQQAQVISADNVQGL- 255 IK+I L L + + L + + + + + V+ + Sbjct: 239 DAAIVTKIIKRIENVFNLILNKHEREEIHMLFHANVDHLPLSDRDKLTTTVGDNIVRAMS 298 Query: 256 --LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 V I +++ + V + HL + + + + +LK +P F++++ Sbjct: 299 SLFAEVQHIFGIDLDNDYFVFPFSLHLNKLFSRAMQGSSLNSPLTESLKQDFPVVFELAV 358 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIE-- 369 L + L IP+ + + I L+ L+R + + I +N + Sbjct: 359 FVSFRLSQLLHIPITEGERAYIALHIGAELDRQKQHSEKIRTAIFSPNYMNLNTQLYQHV 418 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 + + +++ + + LLI +T+ +T+ I Sbjct: 419 SKQFEHDLNVVALVNDPSELDKLDVSLLITTVPQASSM--AYRVVTISPFMTSKEKSTIM 476 Query: 430 HFLATAFIRQQ-----PERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ 484 + Q F ++ + +C QL +H ++ Q Sbjct: 477 ATIEEHRRNVQRDFLRRYFDIYFGEQFFFTLQPIMQRDQVVTLMCDQLEHRHIVSPSFRQ 536 Query: 485 RIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA 544 + RE +A+PH + R+ + +N V++A + + Sbjct: 537 HVFEREEAAGTAFGT-VALPHSVYMEARQTTFSVGIAKNSIRWGERRVNIVVLAAISQND 595 Query: 545 RH-ELKIFSYLASILCQ-HPAEIIAGLTGYEAFMELLH 580 + + ++ L ++ + A +A + +E F ++ Sbjct: 596 QQRFMHLYEALITMFSEPQVATALARVRNFEQFKNVVK 633 >UniRef50_B7CCL3 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCL3_9FIRM Length = 608 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 85/606 (14%), Positives = 224/606 (36%), Gaps = 27/606 (4%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 +LN+RQ KI+++L ++ T E+++ +S +T+ +I +N I + G Sbjct: 4 LLNQRQRKILEILSRENECITSLEISKNLSISSKTVQNEIVAINTKYGDH-IIQSKKGRG 62 Query: 59 YQLE---IFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 Y+L+ + Q++ + + ++ L++ +LA L + + + + + L Sbjct: 63 YKLKDNFVINSDDKQQVVSE-NRKIFIVKELVVQNVIDYYELADRLYISTSSLNKDIKEL 121 Query: 116 KQRYERTCCL-ASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD------NLQ 168 + + R + + K+ ++ LR + + +++ Sbjct: 122 NDEISKKFNVCIVRKKNKLYFKGDDVKKQKVIVYYLRMESENADFDMSILESYFAPLDVK 181 Query: 169 HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEI--KQIVEHSGLFLG 226 + A R + + + ++ L QL + + + K + + +GL L Sbjct: 182 FIRNAIYEYVREKDIVVSDFELMSILLHILAAQLNQNFQENTVNNDFSKYLFKQTGLLLS 241 Query: 227 DNAVRTLTGLIEKQHQQAQVISADNVQ----GLLQRVPGIASLNIIDA-QLVENITGHLL 281 + + ++ + Q + + + + I S+N+ D L++ ++ HL Sbjct: 242 EEVATRIEISLKLNNIDNQSVYYQEYKYFLMEIFDEIKQIYSINLKDDNTLMDELSLHLK 301 Query: 282 RCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ--LDIPLFDSDLIGLYFAC 339 + + ++ + + +D++ + E+ L + + + I ++ Sbjct: 302 YAERRCKANTQLKNPLIDEFRKKYVLVYDIAAFISSRFYEKTTLRLDISEVGYIAMHILG 361 Query: 340 ALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLII 399 AL++ E I+L++ L +D+ N + S + I E ++P LI+ Sbjct: 362 ALQKLSGEDIKIVLVNPYGKAVEKIILNGIKDISNVKYCGNFSFLDTKGISE-VKPDLIL 420 Query: 400 NNSHYLLDDAVNNYITVKNIITAAG--IEQIKHFLATAFIRQQPERFFSAPGSFHYSNVR 457 +++ Y + + IE+I + Q + + Sbjct: 421 TLVQLNWNNSCEVYKIEDYLNSNEYHAIEKIVKQIKVNNAYQSLAISECFNENLFLPEIS 480 Query: 458 GESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGF 517 ++ I +C +L +++ + ++ RE N++AIPH + ++ Sbjct: 481 LQTRDEIIDLMCKRLYENNYVNENFRNQVYQREAVAPTCFSNQIAIPHSIKKDAKKSGIC 540 Query: 518 FITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPA-EIIAGLTGYEAFM 576 L +P+ N + + + K++ + + + + ++ F+ Sbjct: 541 ISVLREPILWNGYNVRLIFMFALNKSFDQVPKLYELILDAIDDKTRYQKMLECKNFKDFI 600 Query: 577 ELLHKG 582 +L KG Sbjct: 601 SILMKG 606 >UniRef50_B9Y2V8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2V8_9FIRM Length = 633 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 92/630 (14%), Positives = 215/630 (34%), Gaps = 56/630 (8%) Query: 1 MLNERQLKIVDLLEQ---QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-- 55 ML +RQ ++ L + Q + LA G+S RT+ +I + + + + Sbjct: 1 MLTQRQQGLLRWLAENGGQYHSAATLAAAHGISVRTVKSEIAAIRLEIKHSPALELTSLP 60 Query: 56 SAGYQLEIFERRSFFQLLQKHDNDD--------------RLLALLLLNTFTPRAQLASAL 101 S GYQL I + LL + LL LL + + + +L + L Sbjct: 61 SKGYQLIIHDPPQAAALLDRMQKTSQNAALNEQPIRIKTILLNLLDHSGYVRKRKLQTQL 120 Query: 102 NLPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 N+ ++ + L +++ + LA R G G+ ++ E + LA ++ A Sbjct: 121 NISDSTLYLDLKAVRKILNKYNLELAYRSGSGYRVEGRETDKRTCLAR--EDIYSMMEEA 178 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILA----------------IYALRNQLTD 204 T+ NL+ ++ + L +S ++L + Sbjct: 179 HETQANLKRITDLKELLVEIFLENEYKISEVLLESLILHLLLTLQRIERGYFIEAGTTKR 238 Query: 205 EWPQYPGDEIKQIVEHSG---LFLGDNAVRTLTGLIEKQHQQ-----AQVISADNVQGLL 256 + I+ + + L + + + L Sbjct: 239 NGGEKETRIAGDILRRCTSVPVSRLSEEINYLAVNLRGKRDYDDYSGVSEEINAFIMDSL 298 Query: 257 QRVPGIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 +++ ++ + L + H + L+ + + + +K +P AFD++ +F Sbjct: 299 EKIHVEYGVDFTRSIDLKIALALHFVPLLSRMQNNRQLKNVLLTEIKQTFPFAFDIANYF 358 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALER--HQNERQPIILLSDQNAIATINQLAIERD 371 L+ + + + + + LYF LE +E + I+++S TI Sbjct: 359 SLLIDDHYHVRISEDEAAYFTLYFNYGLENITMNSEGKKILVISRLKPSETILLRQKIDQ 418 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 +++ ++ L R + + + + + + ++ Sbjct: 419 WFRKQLLQLDFVNPLDLSRIDPGAYDALFTTETKDTVTRGAAVRISLFPSEKDFAKMNLA 478 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + FS+ + + ++ Q I ++ A +H+ + ++ RE Sbjct: 479 INGYDSVDSILSRFSSDL---FWRGQAKNRQEIVARLIAMASRSYHLPKKFEELVLEREK 535 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHELKI 550 +++A+PH + L +PV ++ + VL+ + ++ Sbjct: 536 LSSTYFGSQVAMPHPLYPITAQTFIAVAVLDKPVAWTEDQKVRIVLLVSTEMNNPKAFQL 595 Query: 551 FSYLASILCQ-HPAEIIAGLTGYEAFMELL 579 + YL+S++ I + YE F+ + Sbjct: 596 WPYLSSLISSPQQIHEILRESTYENFIAVF 625 >UniRef50_A8SDV4 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDV4_9FIRM Length = 632 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 88/636 (13%), Positives = 206/636 (32%), Gaps = 67/636 (10%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML+ + ++ L Q + ++A V+ RTI + + A + Sbjct: 1 MLSTK--DVIQYLNQHGNVQAIEDMAAFFSVTPRTIRNHLRSVQDAY--PACLQVGRGQV 56 Query: 59 YQLEIFERRSFFQLL----QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 L+ S Q+ + L ALL + +LA++L + E + + Sbjct: 57 KLLKQIPEESSPSAQVPSSQQERSRYILRALLSRSEPMDLDELAASLFISEVTLQNEVKL 116 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT------RDNLQ 168 ++ FI +E+ + L+ +L+ + ++ T R ++Q Sbjct: 117 IRHEIAEYHLSLRTKNNTLFISGSEKDKKRLMIHLIYNEAQHTLVSMETLHAIFPRYDIQ 176 Query: 169 HLSTACDNQHRWPLMQGDY--LSSLILAIYALRNQL------------------TDEWPQ 208 + + D L++L+L + +QL + Sbjct: 177 KIRSDILACLNSQHFFIDEYSLTNLLLHMLITMDQLGTAPNAPRYEVSTDLIELNRHFVS 236 Query: 209 YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS-------------ADNVQGL 255 ++ G+ + T L+ + + Q +S V + Sbjct: 237 IIDSICTELEREYGIVFTRSNKYQFTLLLMTRAVRNQDVSLPSRATLSIHPSTMRLVDSI 296 Query: 256 LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 +Q V + +++ D H+ L ++++KA P +D++++ Sbjct: 297 VQAVKQVYDIDLTDIDFFIPFALHIDNMLVRIRQNVSVHNPLLHSIKAMSPIIYDIAVYI 356 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALE---RHQNERQPIILLSDQNAIATINQLAIER 370 L+ Q + L + + I L+ ++ + + ++L + ++ Sbjct: 357 SNLINHQEHVQLCEDEIAYIALHIGARIQDIYNRRGKLCAVLLCPQYYSYDHRQFDRLQS 416 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 + I + + + + +L + + N I++ + I Sbjct: 417 YFSDDLTIESVVTAPHELAGLKCDMILSTLPLTAE-----PPVVLISNFISSNDRQAISD 471 Query: 431 FLATAFIRQQPERFFSAPGSFHYSN-----VRGESWQHITRQICAQLVAQHHITADEAQR 485 + ++ ER S + ++ + R I Q+ A+ + + + Sbjct: 472 VIHRLKAAREKERLISLLQTLIDADLFTPGADYADRESAIRTIGGQMCARGIVPQEFIES 531 Query: 486 IIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA- 544 + RE +AIPH + R L +P+ + + + C + Sbjct: 532 TLEREQISPTNFG-MIAIPHPSDCRAARSAIAVSLLRKPLSWGTSSVRIIFMICVSKSDL 590 Query: 545 RHELKIFSYLASILCQ-HPAEIIAGLTGYEAFMELL 579 IFSYL + E +A + Y F+++L Sbjct: 591 SDFSDIFSYLPRVCSDYKTLEQLASASSYPDFIQIL 626 >UniRef50_C6IZU2 PRD domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZU2_9BACL Length = 707 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 96/697 (13%), Positives = 211/697 (30%), Gaps = 123/697 (17%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + RQ +I+ LL + T E+A + VS RT+ R++D + L +G Sbjct: 4 MTARQKQILVLLLGRKHGMTAAEIAAEINVSVRTVHRELDEIEKILAYFGL-VLHRKSGT 62 Query: 60 QLEIFERRSFFQLLQKHDNDDRLL-------------------ALLLLNTFTPRAQLASA 100 + ++ + +K RLL LL LA Sbjct: 63 GISVWSNAEGSEEGEKLQEAKRLLLVDKPSDYSVEERHLLLICRLLEEQEPCKLFTLAHG 122 Query: 101 LNLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPL 159 L + ++ L ++ + R L R G G + E+++ L L + L Sbjct: 123 LKVTVATISSDLDEVEPWFSRFGLELVRRRGYGVELLGEEQQKRAALCQLAAEHLDYSDL 182 Query: 160 A-----GITRDNLQHLSTACDNQHRW--------------PLMQGDYLSSLILAIYALRN 200 L + + + + L++ + N Sbjct: 183 IGGSPENQVSSATARLLEVVGTDNLMTVENTLWAMNWSWTEHLSENAYTQLLIRLSVSVN 242 Query: 201 QLTD--------EWPQYP------GDEIK------QIVEHSGLFLGDNAVRTLTGLIEKQ 240 ++ + + P DE + ++ E L + + GL + Sbjct: 243 RIKAGRLVSCAGKNRKLPPVGGGEQDEAETARFASRLAEKLELTFPPEEIAYMNGLFSRA 302 Query: 241 HQ------QAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEH 293 + QA + D V L + V + D L + H+ + Sbjct: 303 KEASPELVQADMELVDTVYRLTENVVKRTGIPFQEDRLLRSGLLEHMGPAFKRIREGSRI 362 Query: 294 RQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQN---ERQP 350 R + ++ + F + + L+IP + + ++F ++ER + Sbjct: 363 RNPLLGAIRKDYDELFGIVREAMNESVAGLEIPDEEIGFLVMHFGASMERLNQLGLSVRA 422 Query: 351 IILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAV 410 I++ S + + + + +++ V+ S E + E L+I L Sbjct: 423 ILVCSSGLSSSKLLATRLAKEMPQIEVLGNVSWYEAKRLPESDYDLIISTID---LPLPE 479 Query: 411 NNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPG--------------------- 449 + Y+ + ++T E++ ++ ++ + Sbjct: 480 DRYVKLSPLLTDEDTERLLEYVQRTVLKSRKMTPEPESTKTRAFDKVRSLSVSLNEVVSL 539 Query: 450 ----SFHYSNVRGESWQHITRQICAQLVA------------------QHHITA--DEAQR 485 N RG S + ++ +H ++ R Sbjct: 540 LEQFDVRVLNNRGFSLRETVTVALEEMNRLFVPPSGSASFGPEEWQTKHTVSDVQAVTDR 599 Query: 486 IIAREGEGENLI-VNRLAIPHCWSEQERRFRGFFITLAQPVEVNN--EVINHVLIACAAA 542 ++ RE +I LA+ H + L +PV ++ EV + + Sbjct: 600 LLEREKMASQVIPGTSLALFHTRTRFVNYRSLALFRLEEPVVLDGGTEVSALLFMLAPRE 659 Query: 543 DARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 +R L++ S ++++L + + + L Sbjct: 660 LSRESLEVLSEISALLLKPELVELLETGERQEIRNFL 696 >UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metabolism n=3 Tax=Bacillaceae RepID=B7GJR6_ANOFW Length = 691 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 110/684 (16%), Positives = 220/684 (32%), Gaps = 116/684 (16%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 ++ R+ KI+DLL P T ++A+Q VS RT+ RD+ + G Sbjct: 3 ISARERKILDLLLAHPKGITVKDVAKQLDVSERTVHRDLKGVEQVAEAYNLQLIKKAGVG 62 Query: 59 YQLEIFERRSFF-----------QLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 Q+ E + + + L+ALL LA+ LN+ Sbjct: 63 IQIVGDEEKKHQLQMRVFRLSHTEYTPEERQTMILIALLESGEPVKLISLANDLNVTVAT 122 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 ++ L +++++ E+ L + G G I +E + +++ LL +++ Sbjct: 123 ISNDLDKVEEKVEKHGLALVRKRGYGVEIAGSEAAKRKMMSELLFDHFDESQFFSFMKES 182 Query: 167 LQ---------------------------------------------------HLSTACD 175 +Q HL+ A + Sbjct: 183 IQKKSTDLVNTVTEKLLGLVDKKKLFMIERQIEAMKDDLPFTIADSSYIALVIHLALAIE 242 Query: 176 NQHRWPLMQGD-------YLSSLILAIYALRNQLTDEWP-QYPGDEIKQIVEHSGLFLGD 227 + + D ++ + +L + + P +EI I H L Sbjct: 243 RIMQGEAIHFDAQHLQTISMTKEYETAEKIAKRLEEVFHLVIPKEEIGYITMH----LMG 298 Query: 228 NAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAA 286 +RT G + ++ A + A Q L++ V +++ D L E++ HL L Sbjct: 299 AKLRTHRGYMLEE---ASLEIAMKTQELIRFVSEQIGVDLTDDYPLYEDLIVHLKPALYR 355 Query: 287 PVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQN 346 ++ + + F + + + + +P + + L+FA AL R + Sbjct: 356 IQHHMGITNPLLHKIMEDYSELFHVVQRGVRHVFSDMTVPEEEVGYLVLHFASALLRDKQ 415 Query: 347 ERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLL 406 + +++ S A I +++++ + I +S ++ + L++ Sbjct: 416 GIRALVICSSGIGTAKILATRLKKEIPDISHIEQKSFFDVQRVDVHEYDLIVSTVPI--- 472 Query: 407 DDAVNNYITVKNIITAAGIEQIKHFLATA--------------------FIRQQPERFFS 446 + Y V ++ + I+ FL T I E Sbjct: 473 -HTSHPYFLVNPMLPEEEVTAIRQFLKTKAFSIRSQKVNSSKKGIENIRSIHVVSETIVH 531 Query: 447 APGSFHYSNVRGESWQHITRQICAQLVAQHHITADE--AQRIIAREGEGENLIVN-RLAI 503 F + S Q CA L I E + ++ RE G I N LA+ Sbjct: 532 LLNGFSMRELSSYSLQDALMHACAHLEQHGVIRNKERVVEELLQREQVGGLGIPNTTLAL 591 Query: 504 PHCWSEQERRFRGFFITLAQPVEVNNEVINHVLI------ACAAADARHELKIFSYLAS- 556 H SE + TL P + +++ L++ S+++S Sbjct: 592 YHTRSEDVLQPSFTMYTLTHPQTIVGMDQQPMMLNRLLLLLAPKNAPDDMLQVLSHVSSL 651 Query: 557 ILCQHPAEIIAGLTGYEAFMELLH 580 I+ + + E Sbjct: 652 IIKDEESMELFSKGSKEQIYAFFS 675 >UniRef50_Q5WJN3 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=Q5WJN3_BACSK Length = 634 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 89/629 (14%), Positives = 199/629 (31%), Gaps = 67/629 (10%) Query: 1 MLNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSA 57 ML+ RQ ++ L T LA+ VSGRTI D+D ++ L Sbjct: 1 MLSSRQKSVLTKLLRSNHYVTIEFLAKWQNVSGRTIRYDLDAIDDMLKQAGAPLKREPGK 60 Query: 58 GYQLEIFERRS---------FFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 G L + E + K+ + + +++ QLA +L + + Sbjct: 61 GVFLHVGEEKRAELFRIAEGHQVFFDKNVHIAMMSLFAIMHETVTIQQLADEFHLSRSSI 120 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGI----- 162 + LP +++ +R LA + G ++ TE + + L + Sbjct: 121 QKYLPDIEETLDRFGLQLARQARKGFLVNGTERSIRRAIFHWLTDKQVDLERVERWFDCE 180 Query: 163 ---TRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE------ 213 R + +C + +G I + L + P +E Sbjct: 181 KDGGRGQIDRWLRSCQEDRQVFYSEGSLRVLTIFLCWWYERILHGHYVYIPQEEREAGHR 240 Query: 214 -------IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG-------LLQRV 259 + + ++ + TL G + + + ++ Q LL+++ Sbjct: 241 LGELSEVVSALCDNRTAEHEHAFLNTLLGQAKVVSYKNDAVLGESYQKEKDFCTSLLEQI 300 Query: 260 PGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 I +++ D +L+ ++ H+ +K + A ++M Sbjct: 301 STILQVDLLKDKKLMNDLLYHMKAAFLRIEQGLVIDNPYTEEIKVRYRAIYEMVHQITAD 360 Query: 319 LREQLDIPLFDSDLIGLYFACALERHQNER---QPIILLSDQNAIATINQLAIERDVLNC 375 + + + I ++ + +R +++R I++ S A ++I +++ Sbjct: 361 MG--YTLVAAEVAFITMHVSAGFDRSKSKRFLPTVIVVCSTGLATSSILTTKLQQAEPGF 418 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT-VKNIITAAGIEQIKHFLAT 434 +I + +L EE + ++ + + I V ++ I+H Sbjct: 419 HLINVVNTEDLEKALEESDVDFVLTTQELPIKQWNDTKIFRVSPLLNDEDKRTIQHEAQK 478 Query: 435 AFIRQQPERFFSAPGSF----------HYSNVRGESWQHITRQICAQLVAQHHITADEAQ 484 R+Q F W+ A L+ +I Q Sbjct: 479 MINRKQLACFNQVYAHASAVEPTLFDETVHTANTSDWKESIALAAAPLLKAGYIRQGYVQ 538 Query: 485 RIIAREGEGEN--LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN---EVINHVLIAC 539 +I + + ++A H E + ++ + E + V++ Sbjct: 539 EMIMSVERNGTYMVFLPKVAFVHAGPENVIKEGISMTIFEHEIDFGSFNPERVEVVIVLA 598 Query: 540 AAAD-ARHELKIFSYLASILCQHPAEIIA 567 + L++F YL + Q E + Sbjct: 599 IKEAHNQDFLQLFRYLET---QEKREQLI 624 >UniRef50_C6D7L7 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7L7_PAESJ Length = 687 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 93/670 (13%), Positives = 220/670 (32%), Gaps = 95/670 (14%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 ++ R +I++LL + T ++A++ VS RT+ R++ + L + +G Sbjct: 3 ISSRSRRILELLLRNDHDLTAAQIAEEIQVSSRTVHRELAAVEEILRAEGARLLKKSGSG 62 Query: 59 YQLEIFERR-----------SFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 +L+ + + + L LL LA + Sbjct: 63 IRLQGEQAALDRLAQLVSVSEEIEFSPEERQIYLLCLLLESEEPVKLFTLAHEFKVTIPT 122 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 VA L L Q +R L R G G + EE ++ ++R L + Sbjct: 123 VANDLDDLDQWVQRFEVTLTRRRGYGIELTGQEEHLREMIRQIIRDRFEDTELISSRNEL 182 Query: 167 LQH------LSTACDNQHRWPLM-------------QGDYLSSLILAIYALRNQLT---- 203 H L+ ++ + L++ + ++ Sbjct: 183 PAHSLDRRLLAIVGQSEMEAVEKILWSWEEYGGSRLSESAYTDLLIRLSIALRRIRAGKT 242 Query: 204 -----------DEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQA----QVIS 248 + Y + + + E + + L ++ ++ Sbjct: 243 VEASSVEALRQESDAVYLTERLAALTERTFPPSETAYIGRLLRSVQSDDLSVLPADDLVL 302 Query: 249 ADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 D V+ L++ + D L + + HL L R ++ +K + + Sbjct: 303 TDTVRSLIEYAQHAMGADYNKDRSLRDGLFLHLKDALQRLNEGTNIRNPLLDQIKKDYAS 362 Query: 308 AFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQ---NERQPIILLSDQNAIATIN 364 F++ + + +P + + ++F +LER + + I++ S + + Sbjct: 363 LFNVVRKAANRVFTDMVVPDEEVGFLVMHFGASLERLKQLRQNVRAILVCSSGIGSSKLL 422 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 Q+ +++++ ++ S E ++ L+I L + YI V ++T A Sbjct: 423 QIRLQKELPEIHIVDRVSWYEASRTEKDKYDLIISTVDLPLNGE---QYIKVSPLLTQAE 479 Query: 425 IEQIKHFLATAFIRQQ----------------------PERFFSAPGSFHYSNVRGESWQ 462 ++++ F+ T I+++ + S + + Sbjct: 480 TDRLRVFVQTGLIQKRDGALTKEEKAVSEASTFEQLVSLKTTLDEMVSLIRRFEVIQIKE 539 Query: 463 H------ITRQICAQLVAQHHITAD--EAQRIIAREGEGENLI-VNRLAIPHCWSEQERR 513 I + C + A+ +T A+R++ RE G +I +A+ H E+ R Sbjct: 540 KSGVLPVILEEACTREEAKGVLTNSGLVAERLMQREQSGSQMIPGTAVALFHTRGEEITR 599 Query: 514 FRGFFITLAQPVEVN----NEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGL 569 L P+ + + + + +L+ + L++ S ++++L + Sbjct: 600 PSLSLYRLEDPLTLEMASPSRLSHFLLMLAPRTLTKEALEVLSEISAMLLDTVMIDLLEA 659 Query: 570 TGYEAFMELL 579 + L Sbjct: 660 GNEAEIRDYL 669 >UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QUF4_9BACI Length = 685 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 102/680 (15%), Positives = 208/680 (30%), Gaps = 100/680 (14%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GS 56 +LN R ++I+++L T +LAQ VS RT+ D+ +N L + Sbjct: 2 ILNARCVQILNMLLSSSTHVTTDKLAQSMQVSKRTVYYDMQKINDWLRSQGFSPLKHVRD 61 Query: 57 AGYQLEIFERRSFFQLLQKHDNDDRL------------LALLLLNTFTPRAQLASALNLP 104 G+ L+ ++ LQ L + + + L L + Sbjct: 62 LGFYLDDQAKKKISAALQTMQPIRHYEYSSDERKAWIGLLIFIRSGRIFLHDLLEKLQVS 121 Query: 105 ETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDP--------- 154 + + + +LK ++ LA G+F+ E+++ + + + Sbjct: 122 RSTLLNDVKKLKSEWQLFQLELAFHRKQGYFVIGEEKQKRKAIVHYAAQILATVGYERLC 181 Query: 155 ------FLIPLAGITR--DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW 206 ++P+ I R + + D H + +L I Y ++ E Sbjct: 182 SELLGGHILPVKNIIRQSETFSAIRYTNDVIHTLTVYLSIFLKRWIRGKYIQMDEQEKEV 241 Query: 207 PQYPGD------EIKQIVEHSGLFLGDNAVRTLTGLI-------EKQHQQAQVI--SADN 251 Q + I QI + + + + LT + +KQ Q I Sbjct: 242 LQSTREYKTAHHIITQIENVFQVDVPQDEICYLTTYLLGSRVTDDKQIDQNNEIATLKQI 301 Query: 252 VQGLLQRVPGIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 ++ ++ A + +L +N+ H+ + + ++KA + F Sbjct: 302 IKNMVDDFQKYACVQFKHREELEKNLLIHMKPAYYRLKYGLHLQNELTQSVKANYHDIFT 361 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALER----HQNERQPIILLSDQNAIATIN 364 ++ + + + + D + I ++F L+R ++ +I+ + I Sbjct: 362 LTKKVVHHVENVVGQSVGDDEIAYIAMHFGGWLDREGVSVPTRKKALIVCESGIGTSRIL 421 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT--------- 415 Q IE + VI S E A E ++ D V Sbjct: 422 QKQIEELLPTVDVIDIISAREYKAYSLEHVDFVVTTIPLEPRDIPVYIVRPILTAADKML 481 Query: 416 -----------------------------VKNIITAAGIEQIKHFLATAFIRQQPERFFS 446 + + + I ++P Sbjct: 482 LLRETNGLSETRTLAVEALLEIVKRHATIINEKALVQELHEYISQSKRKEILKKPMLKDL 541 Query: 447 APGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EGEGEN-LIVNRLAIP 504 W+ L+ +IT Q +I + G +I +A+P Sbjct: 542 LTKQCIQFVEEVGDWKEAIALAAKPLLDGGYITNAYIQAMIDNVKKLGPYIVITPGVALP 601 Query: 505 HCWSE-QERRFRGFFITLAQPVEVNNEVIN--HVLIACAAADARHELKIFSYLASILCQH 561 H E R+ F+ + + + + ++LI AA D LK S L +L Sbjct: 602 HARPEQGVRKIGMSFLRIKNGCLFSEKEEHRVYILIVLAAIDNETHLKALSQLTKLLSNK 661 Query: 562 PAEI-IAGLTGYEAFMELLH 580 + E + L+ Sbjct: 662 ENMHVLFSTNSIEEVLTLIE 681 >UniRef50_B0MEI2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI2_9FIRM Length = 642 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 91/641 (14%), Positives = 221/641 (34%), Gaps = 72/641 (11%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG---- 55 + ERQL++V L++ T G+LA+ VS R+I D+D + + L Sbjct: 1 MTERQLQLVKYLQECDGYTTAGKLAEVFHVSSRSIRNDLDAVQYYLKELPVEIERTPRLG 60 Query: 56 -----SAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 G+ + + ++ + + + LL+++ QLA L + + V + Sbjct: 61 VRLIVKKGFDITSLYSSNEIKVHSREERVIIITVLLMISEKVTIEQLAEKLQVSKNTVVQ 120 Query: 111 RLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLA---------------NLLRKDP 154 L ++ ++ L + G + EE+ L ++L+ Sbjct: 121 DLRPAEEFLKKHEVRLIKKSYYGMSLKGEEEQIRNTLFNLYIKTASEGSLNILHILKDHA 180 Query: 155 FLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAI---YALRNQLTDE------ 205 + P AG + + + + I + +R + D+ Sbjct: 181 EVDPEAGRNMIRRVEAAMGIRFADESIGELESMILASLCRIRCGFHVRGRTLDDADGVCR 240 Query: 206 ---WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGI 262 PG ++ + + L + R +E + +V+ A + L+++ Sbjct: 241 EAILSGLPGFQVTKGDLSYFVMLFQSTKRMDGESLENWDEDGRVMQAT--EQLIRKFCSD 298 Query: 263 ASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLRE 321 ++ ID ++ I HL + + + M ++K + ++++ + E Sbjct: 299 LKISSEIDPEIQRQIMMHLKVAVFRLKNKIKIKNPLMEDIKYSHSFMYELTERLLKGQEE 358 Query: 322 QLDIPLFDSD--LIGLYFACALERH---QNERQPIILLSDQNAIATINQLAIERDVLNCR 376 L + D++ +YF + + + +++ A A + + I R Sbjct: 359 MLGVVFPDAEIAYTTMYFEVLFQENFSLNLSPEVVLVCGGGTATAVLLKQRISEYFPELR 418 Query: 377 VIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAF 436 V +S++ E P II+ L + I V ++ + I+++K+ ++ Sbjct: 419 VRKICRVSDVEEETERNRPDFIISTVPLSLRN--QQVIHVNPLLNSPDIDRVKNIISVLA 476 Query: 437 IRQQPERFFS-------------APGSFHYSNVRGESWQHITRQICAQLVAQHHITADEA 483 ++ + + + + W+ C L+ + + Sbjct: 477 YNRKNQYLVHRIHQTMQRGIGDLLKEEYCRFDAETDDWKEAIAMACEPLIKNGLVKPEYV 536 Query: 484 QRIIAREGE--GENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE---VINHVLIA 538 + +I + + +A H + R + L P++ ++ + +++ Sbjct: 537 EEMIHIVQNLGNYMVFIPEIAFVHGRKDNVRENCISLMKLKHPIDFGSKAKVDVKVIIVL 596 Query: 539 CAAADARHELKIFSYLASILC-QHPAEIIAGLTGYEAFMEL 578 E + + L IL ++ E I ++ YE + L Sbjct: 597 ----GNITENENLADLVRILAWENNMERIKHISSYEELLSL 633 >UniRef50_B9Y2N3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2N3_9FIRM Length = 627 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 86/620 (13%), Positives = 191/620 (30%), Gaps = 52/620 (8%) Query: 8 KIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFE 65 KI+ L++QP + LA+Q VS RTI I +N + + + + GY L Sbjct: 7 KIILQLQKQPEPISSTRLAEQLHVSSRTIKNHIKGIN---QEQPNLVQATAKGYILNKQM 63 Query: 66 R---RSFFQLLQKHDNDDRLLALLLLNT--FTPRAQLASALNLPETWVAERLPRLKQRY- 119 + + L ++ L L L + + + + ++ Q+Y Sbjct: 64 SLPVPEETPAQSYEERFSYITHLFFVDHASSLNLYDLCDELYLSYSSMKQLISKVNQQYD 123 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDN--Q 177 L + + KR L L ++ A + + + + A Sbjct: 124 AYDLSLKCKNDTIFLVGTERNKRRFLTQTLYKEAAGHFVDAAMLKTHFPEIDIAYLQTTM 183 Query: 178 HRWPLMQGDYLSS-----LILAIYALRNQLTDEWPQYP------------GDEIKQIVEH 220 H + Y++ L+L I + +++ + + I H Sbjct: 184 HNIFMKYNCYINDFGYTNLLLHITVILDRILNGNAFSETNGRQETVHPICEELIATFSTH 243 Query: 221 SGLFLGDNAVRTLTGLIEKQHQQAQV------------ISADNVQGLLQRVPGIASLNII 268 G+ + + LI Q ++ + L + Sbjct: 244 FGVQFNPLERQNMNELITANINFMQRKDDETLKTIVGPQIFKLTHEIIDEINRRYHLQLN 303 Query: 269 DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF 328 L+ ++ H + + ++++ P +D ++ L E +I + Sbjct: 304 KETLLVPLSLHFKNLFYRSQQQTSLKNPLLETIQSSCPLLYDCAICITDYLDEHFNIQIS 363 Query: 329 DSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQLAIERDVLNCRVIIARSL 383 + + ++ LER Q + + + +L D + + +I Sbjct: 364 PDETAYLAMHIGADLERQQKDIKKLKCALLCPDYQQNQQQIYNCLLIHFDSDIIIPTVVS 423 Query: 384 SELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIR--QQP 441 E + E L H + + + QI+ L ++ + Sbjct: 424 FEEELEDKSYELLFTTVPVHANQGFTILLPPMISAMNLKEIYSQIQTVLDRKKMQILTEY 483 Query: 442 ERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRL 501 F +P F+ + I + +C +L +H +++ ++ RE + Sbjct: 484 YPQFFSPALFYLDKQADSRREDILKILCRKLRNEHFVSSHFLDEVLKREQAATTAFGQ-I 542 Query: 502 AIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQH 561 AIPH + ++ + ++ VL+ H K +L Sbjct: 543 AIPHSMKMDCEKTGLAIAISPAGIQWGTQRVHIVLLIAINEKDSHLFKELYEALILLFSD 602 Query: 562 P--AEIIAGLTGYEAFMELL 579 P E++ +E F ++ Sbjct: 603 PSILEVLRQCKTFEEFTNVI 622 >UniRef50_A5Z3Q0 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3Q0_9FIRM Length = 652 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 93/648 (14%), Positives = 226/648 (34%), Gaps = 68/648 (10%) Query: 1 MLNERQLKIVDLLEQQ---PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKA-RIFASGS 56 ML+ER L+IVD L + P T LA GVS R++ I ++ N + + Sbjct: 1 MLSERGLQIVDKLIENNRTPITSKTLAIYLGVSERSVKTYIKEVSDFCNEHSMILERKPG 60 Query: 57 AGYQLEIFE---------RRSFFQLLQKHDNDDRLLALLLLN-TFTPRAQLASALNLPET 106 G+ + + +R ++ K ++ +LL + + LN+ + Sbjct: 61 IGFVADFTDQQIKQVADLKRDKKIVMSKEQRMSYIMYILLSGWDTYTLSLFSEELNVSKK 120 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANL---------------- 149 +++ + + + + + + G G FI E + + Sbjct: 121 VISDDINSIFKEFSKYNIRINRVAGHGVFITGDEFSIRRAMKSYCKYSIGNKVIREASDN 180 Query: 150 -LRKDPFLIPLAGITRDNLQH-LSTACDNQHRWPLMQGDYLSSL---ILAIYALRNQLTD 204 + + + + +DN + + + + + DY + L I R ++ + Sbjct: 181 RISVEDQELWINNFGQDNFEKSVEVIHYIEETYGIAYTDYSFKMLADYLCIQLFRVRMGN 240 Query: 205 EWPQ--YPGDEI-----------------------KQIVEHSGLFLGDNAVRTLTGLIEK 239 + P DE + ++ + L +V++ T L + Sbjct: 241 VITEDIIPEDENIKYSDIVDKVVEKFCSLSKCNLNEYEKQYIEILLASASVQSNTDLYKA 300 Query: 240 QHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVE-NITGHLLRCLAAPVWIAEHRQSSM 298 + + +L+ + I ++++ +L++ ++ + L + E + Sbjct: 301 ISSDKEEKAKKISGEMLEYLSEILNIDLTSNELLKISMENFVPSSLIRTRYGIEATNPFL 360 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSD 356 +++ + F + D + + L+ AL R+ + +IL + Sbjct: 361 GDIREMYSGIFATCFTLTRFYEKYCGAIPTDHEISFLALFVGGALHRNVKTIRAVILGTS 420 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIRE-EIEPLLIINNSHYLLDDAVNNYIT 415 A +TI IE + +++ S + I + + + +L +S D V+ Sbjct: 421 GIAASTIVARKIESRIEEIKIVAILSSELMDTIDQYDCDIVLSTISSFEYEDKVVHISPI 480 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 + + ++ +++Q + + N + + I ++ C +L Sbjct: 481 ISAEDEKNIKSKCFEIISHPELQKQGFYSLIDIDNILFVNEKL-DKEKILKEACKKLYNG 539 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 ++ D ++ RE I N +AIPH + + + F + LA P+ ++++ + Sbjct: 540 GYVNKDFFDDVMKREKIEPTAIGNGVAIPHGTPDNVIKPKVFVVRLAHPINWGGKMVDTI 599 Query: 536 LIACAAADARHELKIFSYLASIL--CQHPAEIIAGLTGYEAFMELLHK 581 + D K F + + L I + ++L + Sbjct: 600 FVLAINFDNIGSTKAFFHDFARLLGSGDKIARIRKSSDIREMEKILKE 647 >UniRef50_Q3XZH6 Transcriptional antiterminator bglG:Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=9 Tax=Lactobacillales RepID=Q3XZH6_ENTFC Length = 640 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 93/639 (14%), Positives = 213/639 (33%), Gaps = 62/639 (9%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF---ASGS 56 +N+RQ ++ L + T +LA+ VS RTI D++ + L K Sbjct: 1 MNQRQQSLIYQLSENNNYITTKKLAEHFHVSERTIHSDLNTIETWLRDKHLPLMFERKKG 60 Query: 57 AGYQLEIF--ERRSFFQLLQKHD---------NDDRLLALLLLNTFTPRAQLASALNLPE 105 G L ER + L + + LL+ +L+ L + + Sbjct: 61 TGILLNGLPHEREQLKRALNEETQTEMDKKQLRQLLIFHLLVAKDGFSLEELSEKLYVGK 120 Query: 106 TWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITR 164 + + L L+ +E L S+ LG F+ E+++ LL LR P + + Sbjct: 121 RTIRKELTELQSFFEYHHLQLVSKTKLGTFLKGDEQEKRQLLVKTLRNMQKEDPQSPSLK 180 Query: 165 DNLQHLSTACDNQHRWPLMQGDYLSS------LILAIYALRNQLTDEWPQYPGDEIKQIV 218 + + + ++L + + IY + ++ + ++V Sbjct: 181 EFFAKDTLKVIQHTLQDVFYENHLEQPNGLASVEIHIYFMLERMKQYQKVKLSKDENEVV 240 Query: 219 EHSGLFLGDN----------------------AVRTLTGLIEKQH-QQAQVISADNVQGL 255 EH+ + A+R Q + Q S+ L Sbjct: 241 EHTQAQKLSSQILAKLATIYPIEFSPDEINYLALRIANLFTNSQAATRFQKESSALADHL 300 Query: 256 LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 +++V ++ D L +N+ HL + + N+ + + F + Sbjct: 301 IEQVEQFLGYSLKEDQLLKQNLRSHLSSTYFRLHYGLQISNPLTKNVFSTYTQLFLVLQL 360 Query: 315 FITLLREQLDIPLF--DSDLIGLYFACALERHQNER----QPIILLSDQNAIATINQLAI 368 + E+ + + ++ + ++F A+ERH++++ Q +++ A+AT + + Sbjct: 361 ILEDYFEKENFYVPQEETAYLTIHFQAAIERHKHQKSRRYQTVLVSEYSKAMATFLEARL 420 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 R++ ++ + ++ I+ + I + +IT + + Sbjct: 421 NRELPELTIMDLVEYKPELKRQDFPSVDFIL--ATLPFKHISIPVIEISPMITETDLAYL 478 Query: 429 KHFLATA---FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR 485 ++ ++ + + + I + LV H++ + Sbjct: 479 TKYMLEHVPIKKKKTFDLASFTHPFLIFPQLERTDPADILNFMGNVLVEHHYVEPEFIDS 538 Query: 486 IIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADAR 545 ++ R+ + + IPH + T+ +PV + E I VL+ + Sbjct: 539 VLERDSHSSTRVAPFVTIPHGNPLYVKHSMISIATMKEPVLWHGEQIRIVLLLAIKKNDL 598 Query: 546 HE--LKIFSYLASILCQHPAE--IIAGLTGYEAFMELLH 580 K + L + P + + + LL Sbjct: 599 KHAEFKKIFSVIHYLEKQPEQMAQLMQSNHPLEILTLLS 637 >UniRef50_C2BXP0 Transcription antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BXP0_LISGR Length = 637 Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 101/633 (15%), Positives = 220/633 (34%), Gaps = 58/633 (9%) Query: 1 MLNERQLKIVDLLEQQ---PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA 57 MLNE+Q ++ LE+ T ELA + RTI + +N L GK + + Sbjct: 3 MLNEKQKDLLTFLEKHKDSWITSKELAAYCECTTRTIRNRVASINAELPGK---ITASTY 59 Query: 58 GYQLEIFERRSFFQLLQKHDNDDRLLALLLLN-TFTPRAQLASALNLPETWVAERLPRLK 116 GY+L + Q L+ LL LL + +LA L + E+ + + ++K Sbjct: 60 GYRLNTEIKAIGEQPLRNDRKSRILLELLKKSADGIDIYELADNLFISESTLKADIQQMK 119 Query: 117 QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQ-------- 168 + + + TE + + +LL + L + + Sbjct: 120 KEFTAKNIQIIFEKDTVKLVGTERAKRRYMISLLYDESNLQEKLKASIQQMIGYISLAAL 179 Query: 169 ----HLSTACDNQHRWPLMQGDYLSSLILAIYALRN-------------------QLTDE 205 + A + + ++I +R +L E Sbjct: 180 QEMIRMVFAGHEIRINQYTLNNIVLHYAISIERIRQGHIIKKQTDNQDFQTKREYELAKE 239 Query: 206 WPQYPGDEIK------QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRV 259 +E ++ + + LF+G + ++ + + +L++V Sbjct: 240 IADKLAEEYAIDFSEGELEQLALLFIGIQNETSANSKNKQLKEVVDEKIITALHDVLKQV 299 Query: 260 PGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 + + D + + H+ + R SS+ +LK A+P +D+S++ +L Sbjct: 300 KKTYLIELGDDQEFFNKLAIHVQSLYHRSKYDTFARNSSLLDLKTAYPLIYDISVYISSL 359 Query: 319 LREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCR 376 ++E+L I + + I L+ L +N + LL N +++ + + Sbjct: 360 IQEKLAIWFNEDEISFIALHIGSFLGTQKNSIEQASLLLVANDYHDLSENIVAKLENTFG 419 Query: 377 VIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL---- 432 I + AI+ + +L+ + I ++ ++ + +I+ + Sbjct: 420 EQIFIKTANEAAIKAQSYDMLLTTDHSIAERYE--RAIFIQPLLHQNDLRKIEKRIYQIK 477 Query: 433 ---ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 + Q ++F A F+ ++ + + I +QI +L+ ++ D Q + R Sbjct: 478 EQKQKVKMHQYIDQFIPAELYFNQVDLAAATPKAIRKQINQRLLHNGYVGEDFLQSVEKR 537 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELK 549 E + +AIPH + +TL +PV + + + D Sbjct: 538 ESMSSTGFPSGIAIPHAIEISAVKSSVAVMTLQEPVMWEAYPVKLIAFVTISKDESKVFN 597 Query: 550 IFSYLASILCQHPA--EIIAGLTGYEAFMELLH 580 F + + ++ + Y F+ L Sbjct: 598 DFFERFIEIVSDAVNTKQLSTSSSYAEFIGRLK 630 >UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N6K6_9FIRM Length = 644 Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 90/636 (14%), Positives = 213/636 (33%), Gaps = 58/636 (9%) Query: 4 ERQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSAGYQL 61 R +I D + Q + +L+ ++ RTI DI +N L AGY + Sbjct: 6 NRLNEIFDYVRQDNIVSASQLSVLLNITDRTIRSDIQAINEILEKNGAKIKLKRKAGYYI 65 Query: 62 EIFERRSFFQLL---------------QKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 EI ++ + L + L LL + + LA + + + Sbjct: 66 EINDQEKYNTFLCSIKQTRTSNLELDSSQDRIKYLLNLLLYSDEYMSLDDLADNIYVSKN 125 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 + + LK + + S+ +G I E+ + L + F + G T+D Sbjct: 126 TLQNYIKTLKAIFSKYNLEYISKTNVGVKIIGNEDDKRKCLVENVLSYNFQNYVTGFTKD 185 Query: 166 NLQHL---------STACDNQHRWPLMQGDYLSSLILAIYALRN---------------Q 201 + + D+ ++ +AL + Sbjct: 186 EYTLFEGIDLDLLKQIISNKLKNAHIKTNDFNFKNLIIHFALMISRIQFDCYINTNNTIK 245 Query: 202 LTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD-----NVQGLL 256 + D + + D +I + + + + + + Q ++ D V+ LL Sbjct: 246 IDDNYTDFIDDIANEIEYTFNITISEGEKKYIYSHLVANTQLNDLVDNDNKIKELVEELL 305 Query: 257 QRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 + + ++ D L ++ H L + R +N +K +P AFD++L Sbjct: 306 NNIYFDYNFDLRNDEILSHDLFLHFKSILNTKSFALNKRNPLLNTIKTNFPLAFDITLTC 365 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERHQN----ERQPIILLSDQNAIATINQLAIE 369 + + L + + + L+ A+ER + + I++ A + + + Sbjct: 366 TAKIFNKPPYILTEDEVGYVSLHIGAAIERCFSGSLQNKSVILVCGSGQATTRMLEARLN 425 Query: 370 RDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 + ++ S +E + + + S L ITV + IE I Sbjct: 426 VFFKDKITIVRKASYNEFINYTKRELLNIDFVISTIPLKSEHIPTITVDFALNNQDIEAI 485 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 FL + + + + + +S + + +Q+C + Q+ + ++ ++ Sbjct: 486 SKFLTSISLNKMKKSNKFFDKNLFIHLDGIDSKESLLKQMCQLMEKQNIVDSNYFDCVME 545 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHE 547 RE + + A+PH + + + +P+ + + + + + + Sbjct: 546 RENLAKTNMNEVFALPHPMRLCAKDTKVAVAIIDKPLTWYQQDTVQIIFLLAIKQGDQQD 605 Query: 548 LKIFSYLASILCQHPAEI--IAGLTGYEAFMELLHK 581 ++ + + + I Y++F+ L + Sbjct: 606 IEHLYDIFIEIVNNAKLQQSIIHSYNYDSFINNLLE 641 >UniRef50_C9XML5 Transcriptional antiterminator n=4 Tax=Clostridium difficile RepID=C9XML5_CLODC Length = 629 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 100/632 (15%), Positives = 233/632 (36%), Gaps = 58/632 (9%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSA 57 M+ ++ IV L + T ELA + VS +TI R I LN L+ + +S Sbjct: 1 MITKKHAIIVKSLSNKDGYMTSNELAIKLDVSTKTIKRYIADLNSVLSKYDLVIASSRGI 60 Query: 58 GYQLEIFERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPE 105 GY+L + + + + ++ +L+ + +A LNL Sbjct: 61 GYKLSGSKNNIARAVKEANKYIDGFLDDSEESRMSNIICMLINRNYMSIEAMAEELNLSI 120 Query: 106 TWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPF-------LI 157 + + +LK++ E+ + S+P G +I E L+ + K L Sbjct: 121 AAINKLSSKLKRKLEKYDLVIKSKPYYGSYIHGEEINIRQLITDYAIKLDEKSKVKVFLD 180 Query: 158 PLAGITRDNLQHLSTACDNQHRWPLMQGDY---LSSLILAIYALRNQLTDE--------- 205 ++ ++ + + + D+ LS +I++++ + ++ Sbjct: 181 DISENDIYCIESILEKHLREKDTIISDKDFNLLLSKIIVSVFRSKRGHSNNINLMDTSYR 240 Query: 206 --WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGL----------IEKQHQQAQVISADNVQ 253 + + +K+I + G L ++ V ++ K + + + + Sbjct: 241 FHNYYFIENLMKEISDKIGFKLIEDEVIYISNYSGVIAYKGTQGRKNTSEIEERISSVIS 300 Query: 254 GLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 LQ + I+ + D + + I+ H+ R L + ++ +K +P AF+++ Sbjct: 301 SALQDIFLISGSDYTKDDEFMVAISDHIKRFLNRARANVKSNNPLLHQIKEKFPIAFNLA 360 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE--RQPIILLSDQNAIATINQLAI 368 + L + ++ L + + I ++FA + ER + ++ I+ + + Sbjct: 361 VFLSNKLETEFNLKLDEDELGYIAIHFAASNERMKKNTSKKICIVCHYGIGTGQLISEKL 420 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 ++++ + V+ + L + L++ + V + ++NI + IE + Sbjct: 421 KQNISDLSVVGVYPVRYLDMAISQDVDLIVSTVELKGYEKPV---LYIENIFDDSLIENV 477 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 R++ +F + + + + + +L + I + II Sbjct: 478 NKAFYEKEERRKIISNMFDEKAFFSI--KASTKEEVIISLSNKLKERDFIEESSIKSIID 535 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE I N +AIPH + +++ L P+ + + + V + +H Sbjct: 536 RENISSTEIGNLVAIPHTIVKGDKKSIIGVGILENPIIWDKQEVQLVFMVFFNTKEKHNF 595 Query: 549 KIFSYLASILCQHPAEI-IAGLTGYEAFMELL 579 IF YL + + I + + M L+ Sbjct: 596 SIFKYLYNFIKDEGGVRGIIKICDFNKLMALI 627 >UniRef50_C5EEI0 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEI0_9FIRM Length = 635 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 97/634 (15%), Positives = 196/634 (30%), Gaps = 64/634 (10%) Query: 1 MLNERQLKIVDLLEQQ-PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR---IFASGS 56 M +R+ I+ L + T +LA VS +TI DI +N L I Sbjct: 1 MKKKRENAILMKLIRDGSCTIRQLALLCDVSYKTIQNDIKDINRKLGQNGFACKIVTQSG 60 Query: 57 AGYQL-------------EIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNL 103 G L ++ K R+ LLL + + L L Sbjct: 61 VGVVLGNTGDECLDEVCALFQDKGEARGEYDKEYESLRIAYWLLLEDYVKMDDICEKLAL 120 Query: 104 PETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEK-RVILLANLLR---KDPFLIP 158 T AE L + KQ + +AS+P G + TE R+ L +L+R KD + Sbjct: 121 SRTVTAELLNQSKQLLKAYGIQVASKPYYGLYAKGTESSIRIFLFEHLIRRSGKDVACLL 180 Query: 159 LAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDE------------- 205 L H + + L L+ + + ++ + Sbjct: 181 GDSQINPALMEGVVVLIRNHNVS-VTDEILEQLLCYVEIMAIRIRKQAHIEAGLVERDVT 239 Query: 206 -WPQYPGDEIK---------QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGL 255 + ++I +I E ++ V L + + + + Sbjct: 240 SFESILSEKIAVTVSYELDTRIEEPEVDWIYRFVVGKLQNKASQDEETDSAVLESVFHAI 299 Query: 256 LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 L+ + D +++ HL ++ +K A+D++ Sbjct: 300 LELCQEKYGYDFSQDIDFYSSLSIHLNALFKRARNNNYSINPMIDEMKTYSLLAYDIAFD 359 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERHQNE---RQPIILLSDQNAIATINQLAIE 369 L+ ++L + L D + + +Y A+ER + ++ +++ ++ + I+ Sbjct: 360 LSLLINDRLGVCLPDDEISYLAIYLHLAIERKKRNIVPKRLLVVCPTGRGMSELIGYHIK 419 Query: 370 RDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 + + EL + L + + + I A I Sbjct: 420 KQFGEYISELKTCGYYELDHVDYSQYDYLFT-------LKPLERTVPLPVIEFALDESSI 472 Query: 429 KHFLATAFIRQQPERFFSA-PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 K + P + +++ RQI ++ + + ++ Sbjct: 473 KSAKRKVLGKHDKLPLLCMTPQELFFPDIKAADKPDALRQIIERVGKAVKLKESFYESVM 532 Query: 488 AREGEGENLIVNRLAIPHCW-SEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARH 546 RE + N A PH ++ L+ P+ + I VL+ Sbjct: 533 EREKIVATELPNGFAFPHPLGTDMAECSFFSISVLSNPIRWKHRKIQIVLLTYVKGKVTS 592 Query: 547 ELKIFSYLASIL--CQHPAEIIAGLTGYEAFMEL 578 +L+ F + L + A + YE +E+ Sbjct: 593 DLEQFYESFATLVSNKEYAVSLIENPTYEKLVEV 626 >UniRef50_B4U0E0 Sorbitol operon transcription regulator SrlM n=3 Tax=Streptococcus equi RepID=B4U0E0_STREM Length = 622 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 89/624 (14%), Positives = 197/624 (31%), Gaps = 52/624 (8%) Query: 2 LNERQLKIVD-LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L R +I++ L+ Q EL Q VS +T+ + I+ LN L A Q Sbjct: 3 LVNRWYRILEPLVAQNQMAFEELRLQLDVSAQTLAKSIEQLNDIL-DGDATITQQGAFLQ 61 Query: 61 LEIFERRSFFQLLQKHDND------------DRLLALLLLNTFTPRAQLASALNLPETWV 108 L++++ +L L LL ++ LA + + + + Sbjct: 62 LQVYDYARLETILAGSLRKASDFNSASKRVAYLLKRLLQSSSALVIDDLADEIGVSRSTI 121 Query: 109 AERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 + L K + + +P G TE +L + + K L+G + L Sbjct: 122 NKDLKTAKALARSYSVMIQGKPNHGIQAVGTELNLRLLYVHEVYKYFEPQGLSGDSLFFL 181 Query: 168 QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGD 227 L + + L+ I + R LTD P Y + + + Sbjct: 182 DELYQTYQLPRKIQELLTKSLAITIERMRQGR-YLTDPIPYYSNEVDSNAFMEELVCHIE 240 Query: 228 --------NAVRTLTGLIEKQHQQA---------QVISADNVQGLLQRVPGIASLNIIDA 270 R Q +++++ + I Sbjct: 241 LAYQLSLSQYERQFISFPLNIQYIEGLAYQERPLQESIVRLYSKMIEQIKASLLVTIDQD 300 Query: 271 QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD--IPLF 328 +L + HL + ++ + ++ +P AFDM+ +L E+ D I L Sbjct: 301 KLFVALHTHLKLLVNRLIFHVQANDIFHGEIRYKYPLAFDMANVAAQVLAEEFDCAIELS 360 Query: 329 DSDLIGLYFACALERHQ-----NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSL 383 + + LYF ++ + ++ ++ + A + + + + ++I++ Sbjct: 361 ECSYLALYFEMMMQDAEHVTEPTVKKIAVVCTTGRGTANMICRRLSKVLGP-DLLISQFS 419 Query: 384 SELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPER 443 E + I + + + N+ ++ + + Sbjct: 420 EEQFNPADNDHYFAIFTTVPLKFGQLKSPVVQITNLFDDQWLQNEWRRVHHYHQKNLTTI 479 Query: 444 FFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAI 503 +G+++ ++ L + + QR++ RE L NR+A Sbjct: 480 TLH-----FARLSKGKAYTDYLIEMAELLEDKQLVDRQFGQRLLEREALQSTLFGNRIAF 534 Query: 504 PHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD-----ARHELKIFSYLASIL 558 PH +++E + L +P ++ ++ + + L I+ + I Sbjct: 535 PHTINDKETKTVLLLGLLDEPYREHDCLVEFIFLVAIPKRVEAQMEADLLDIYDDIFKIA 594 Query: 559 CQHPAE-IIAGLTGYEAFMELLHK 581 + + GL F+ + Sbjct: 595 SDDKLQAELRGLKNQADFIAFTKE 618 >UniRef50_UPI00017890F3 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017890F3 Length = 689 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 112/677 (16%), Positives = 220/677 (32%), Gaps = 100/677 (14%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 + RQ +I+ LL T E+A GVS RT+ R+++ + L G + G Sbjct: 6 ITARQRQILLLLMSRTDGMTAAEIAADVGVSVRTVHREMEEIEKDLQGTGVVLLKKSGTG 65 Query: 59 YQLEIFERRSFFQLLQKH----------DNDDRLLA--LLLLNTFTPRAQLASALNLPET 106 +LE + L + + L+ LL + LA +L + Sbjct: 66 IRLEEEKPEGLSLLRRSLLAGKPADYSVEERKILMLCALLEADEPIKLFALAHSLKVTVP 125 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 V+ L L+ +R L R G G ID E R + L + L G Sbjct: 126 TVSNDLDELEPWMKRFNLKLIRRRGYGIEIDGAEGVRRRAIGRLAEEYLDYSDLVGDGYS 185 Query: 166 NLQHLSTA-----------CDNQHRWPLMQGDYLSSLILAIYA--------LRNQLTDE- 205 + + TA D + M D+ L + Y N++ Sbjct: 186 DTREPVTARLLSMIDKPALLDVEKTLWDMNWDWTEDLSESAYTSTLIALSVSVNRIKRGR 245 Query: 206 ---------------WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQ------- 243 + GD + ++ E + ++ + + L E Sbjct: 246 GMEAADIAGYPPSPVSVEEAGDFVGRLGETLEMNFRESEMIYIAQLFEAAKNMSEVSELV 305 Query: 244 -AQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 A V + L++RV G + D L + H+ L R ++ + Sbjct: 306 HADVEMVEIAHRLIERVQGRTGIPFQEDRTLRAGLVEHIGAALKRIREGTRIRNPLLSPI 365 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQN---ERQPIILLSDQN 358 + + F + + L+ L IP + + ++F + ER + I++ S Sbjct: 366 RKDYEELFGIVRRSVDELKLDLSIPDEEIGFLVMHFGASSERLNQPEHHLKAILVCSSGL 425 Query: 359 AIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKN 418 + + + + +++ V+ S E I +E L+I L + Y+ + Sbjct: 426 SSSRLLGTRLNKEMPQIEVLGNVSWYEAARIPKEQYDLIISTID---LPLPKDRYVRLSP 482 Query: 419 IITAAGIEQIKHFLATAFIR--------------------QQPERFFSAPGSF------- 451 ++TA E + F+ + ++ + Sbjct: 483 LLTADDKEALLRFIQSTSFEPASSRAAVSRIEEDRKAASFERLRMQAALMNEIVSLLDGF 542 Query: 452 --HYSNVRGESWQHITRQICAQLVAQHHITADE--AQRIIAREGEGENLIVN-RLAIPHC 506 ++ + Q + ++ Q + E +R++ RE G LI + LA+ H Sbjct: 543 HVYHLDNLQNDLQGTLNEALVKVYEQGALRDAEMVKERLLERERMGTQLIPDTTLALFHT 602 Query: 507 WSEQERRFRGFFITLAQ--PVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAE 564 S LA P+E + +L+ + L++ S ++++L + Sbjct: 603 RSRYITWPSLSLFRLAHQAPLEDGAQAGVILLMLAPKQLPKESLEVLSEISAMLLRSELI 662 Query: 565 IIAGLTGYEAFMELLHK 581 + G E L + Sbjct: 663 ELMERGGEEEIRSYLAE 679 >UniRef50_C8NFM1 PRD domain/PTS system IIA domain protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NFM1_9LACT Length = 628 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 100/628 (15%), Positives = 217/628 (34%), Gaps = 52/628 (8%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML++RQ +I+ LLE+ T E+AQ TGVS RT+ ++ + LN +I G Sbjct: 1 MLSKRQSRILSLLEESKRYLTAEEIAQSTGVSKRTVHSELKSMEEDLNSIEKILI-RKRG 59 Query: 59 YQLEIFERRSFFQLLQKHDNDD-----RLLALLLLNTFTPRAQLASALNLPETWVAERLP 113 + I +++ + ++D + LL +L+ L + ++ +++ L Sbjct: 60 IGIAIENKKNLESKTFELNSDKSRLQVIMENLLFGEKIISYNRLSELLFVSKSSISKELE 119 Query: 114 RLKQRYERTCCLASRPGLGHFIDETEEKRVI--------LLANLLRKDPFLIPLAGITRD 165 ++++ +S G +++ E + L + + L + Sbjct: 120 KVQKILGGIDLKSS--AKGSYLNGDESQLREAYIRFNHWLFTQCTSNNTYSDWLGKLEEY 177 Query: 166 NLQHLSTACDN------QHRWPLMQGDYLSSLI--LAIYALRNQLTDEWPQYPGDEIKQI 217 +++ AC + ++ W + Y+ SL+ L + R + P + Sbjct: 178 YSENVVAACKDVLISYLKNNWDFVSEVYVQSLLSSLIVQTYRMYCGEFVKCKPSGIESEE 237 Query: 218 VEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS------------ADNVQGLLQRVPGIASL 265 + L + + IEK++ ++IS V ++ + + L Sbjct: 238 AVNRILNEVSDRLNIDFNEIEKEYFAGKLISFRFEPAASKVIEQQLVHQIVLDMCSVLKL 297 Query: 266 NIIDAQLVENIT-GHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD 324 I + ++ + H+ L + ++ +K + F + L Sbjct: 298 TINNDCGIKAMLENHMFSMLYRLRNHQKIENPFVDQIKEEYGVVFQTIWIVLQKYESLLS 357 Query: 325 IPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARS 382 + D + + +YF +E ++ ++ +++ A + + + + + S Sbjct: 358 VQFNDEEIAYLTIYFQTFIEENRTIKKLLVVCQLGVATSELIIRKLINYLPATTKVERVS 417 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQP- 441 + +++ E LI+ LD A +N I V +T ++ I+ L Q Sbjct: 418 KQQFERMKDLEEYSLILTTI--TLDRAKHNTIKVSPYLTKNELQMIREVLDENESSHQNV 475 Query: 442 ------ERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 S I L + ++ I+ RE G Sbjct: 476 QKGISNRYGGIFNQEIDCVKKEWTSKVEIIEAASNVLFKEGFVSEKFKDGILIRENLGGT 535 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA-AADARHELKIFSYL 554 + +AIPH + + +TL + ++ + ++ V C D KI + Sbjct: 536 DLPIGIAIPHGKPQDVYKTTILPVTLKRKIKWDEFYVDIVFFICICEEDRMKTKKIIQNI 595 Query: 555 ASILCQHP-AEIIAGLTGYEAFMELLHK 581 SI+ I E F K Sbjct: 596 YSIMEDKELLRRIRNCKSMEEFFITFEK 623 >UniRef50_B3W767 PRD-and EIIAMtl/Fru-containing transcription ativator n=7 Tax=Lactobacillus RepID=B3W767_LACCB Length = 597 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 102/604 (16%), Positives = 199/604 (32%), Gaps = 51/604 (8%) Query: 5 RQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEI 63 R+ I++ L+ P + LA GVS RT+ D+ LN N I + + GYQL I Sbjct: 2 REQTIINALQTNGPMSAAALAATLGVSRRTLQSDLRQLNED-NTGFIITVTRNVGYQLTI 60 Query: 64 FERRSFFQLLQKHDNDDR-----------LLALLLLNTFTPRAQLASALNLPETWVAERL 112 + F + + + LL + AQLA + + L Sbjct: 61 TDSAQFAAYQASLQDQAQPAMPAKRLPALMHVLLTTTEYLTVAQLAEHELISSKQLQRDL 120 Query: 113 PRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLS 171 L++ T L + G + + R+ L R H Sbjct: 121 RELEKLLIGTPLQLERKAHYGIRLQGEWQSRIHAL---------------QQRGLPPHHQ 165 Query: 172 TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVR 231 T C Q PL +++ + + + L + A + Sbjct: 166 TLC--QRLMPLGLDPAITAQFAGEVGWSLAVKGQATVPAPTTAAFAGLLADSRLSEEAWQ 223 Query: 232 TLTGLIEKQHQQAQ-----VISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLA 285 LT +H+Q + +Q + + + + + H+L + Sbjct: 224 FLTVSFAAKHKQLTTRLDHDLLKTKLQAYFTALDTRHKTDFATHPEFLSLMYFHVLALIG 283 Query: 286 APVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF--DSDLIGLYFACALER 343 S+ L +P AF+ ++ F L + I + + + + LE+ Sbjct: 284 RLQKHQSLAGLSLEPLARDYPIAFNWAVQFAQWLTREYQIAVPKTEIGYLTTHLLVPLEQ 343 Query: 344 -----HQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLI 398 + + +L IAT+ L + R VI L+EL AI E LL Sbjct: 344 AHEAWSRRLYKIAVLCGTGGGIATLLCLRLRRIFPE-AVIQTFGLNELTAIHELEPDLLF 402 Query: 399 INNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSA-PGSFHYSNVR 457 L + + + + + ++H L+ A + + + + Sbjct: 403 TVT--ELTETFDCPVVRIDELASDLDFANLRHELSMAARSNNTDTLVDLLTPALFFQTSQ 460 Query: 458 GESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGF 517 + + + A + + + +D A+ ++ RE + N +AIPH S + Sbjct: 461 AADYHALLLALTATMTS-YCGQSDYAESVMQRENFLATIYDNGIAIPHPLSFNAEKNAVA 519 Query: 518 FITLAQPVEVNNEVINHVLIACAAADARHELKIF-SYLASILCQ-HPAEIIAGLTGYEAF 575 + L ++ + V + D + + LA+++ Q E + T + F Sbjct: 520 VVVLPNGAGGSSRPVKLVWLIALKRDQLPLHRTLTTQLAALMQQPDVIEQLVHQTDFTRF 579 Query: 576 MELL 579 + +L Sbjct: 580 INIL 583 >UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ADA7_ENTCA Length = 669 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 87/663 (13%), Positives = 198/663 (29%), Gaps = 95/663 (14%) Query: 6 QLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA--SGSAGYQLEI 63 LK++ + ++A+Q GVS RT + + L L GY+L I Sbjct: 1 MLKMLYQNRNTYTSSKQIAKQLGVSDRTARKYVQGLGLILKNHKLGQICAKQGQGYRLNI 60 Query: 64 FERRSFFQLLQKHDNDD------------------RLLALLLLNTFTPRAQLASALNLPE 105 ++RSF + + N L LL LA+ L + Sbjct: 61 TDQRSFDRFYTEKTNTRPTAADLTTINEANDRQYFVLNQLLFGQKPVFVDDLAADLCVSR 120 Query: 106 TWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT- 163 + ++ + +KQ + T L R G ++ +E + N + L + Sbjct: 121 STISNDIVEIKQLLKPYTIELKHRTSQGIYVAGSENSLRHFIMNYFFMNRLQDNLYAFSM 180 Query: 164 -------RDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQY------- 209 + + D ++ L D++ I+ L + + Sbjct: 181 YKHLLEGIAIEEIVIIVLDTCRKYFLKLSDFMIYTIVLHIGLAIKRLQAGFEIQLHPQEA 240 Query: 210 --------------------------PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQ 243 P +E I H L +R L + + +Q Sbjct: 241 NLAQEVEYQSALEIVEKIRQQMGIVLPPEEAFYIAIHLKNKLVSETIREQIDLDDNEVKQ 300 Query: 244 AQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKA 303 ++ + D L++ + H+ L + +K Sbjct: 301 QLLVVLQKIDQ------ETGFCLAEDPLLIDGLMMHITPLLQRLNNGTSMENPLLETIKK 354 Query: 304 AWPAAFDMSLHFIT--LLREQLDIPLFDSDLIGLYFACALER--HQNERQPIILLSDQNA 359 + F +++ + + + + ++ A+ER +Q + + +++ + Sbjct: 355 DYSDFFQLTIRHFSDVPFFAPYKVTEGELAYLTIHLTAAMERLANQQKARVLVICATGIG 414 Query: 360 IATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNI 419 + + + +E ++ + VI ++ ++ LII++ +TV Sbjct: 415 SSQMLKNRLEHELGSKLVIEEMISYYEISEQKLAGIDLIISSIKVPDVVLNIPIVTVSVF 474 Query: 420 ITAAGIEQIKHFLATAFIRQQPERFFSA-----------------PGSFHYSNVRGESWQ 462 + I++I L ++Q + Sbjct: 475 LDKKDIQKINRQLKQYKTKKQYRSVLKQRPKTLSDKERELIETSFRPELFLWLAEETDKE 534 Query: 463 HITRQICAQLV--AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFIT 520 + Q+ ++ + + +++ RE + LA+ H Sbjct: 535 AVLDQLLTRIESVEKRAVKEALGKQLALREAYSSVAFSDHLAVAHPIEPITNDAYAAVAI 594 Query: 521 LAQPVEVNNE--VINHVLIACAAADARHELKIFSYLASILCQHPAEI--IAGLTGYEAFM 576 L Q ++ ++E I + + + EL S L + + + + +E FM Sbjct: 595 LKQGIKWDDEHDQIQLIFLLSPDRLGQVELNKISQLLVPIIEDESFKDALIASGDFEHFM 654 Query: 577 ELL 579 E Sbjct: 655 ECF 657 >UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G824_9ACTN Length = 470 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 67/448 (14%), Positives = 150/448 (33%), Gaps = 30/448 (6%) Query: 153 DPFLIPLAGI-TRDNLQHLSTACDNQHR--WPLMQGDYLSSLI-LAIYALRNQLTDEW-- 206 + L+ + ++ L H+ A + ++ L ++ + Y + Sbjct: 14 EAQLLTINAAAFQNLLVHIVIALIRISNDCYVPIEDSRLQRIVATSEYRAAEDIARRIDA 73 Query: 207 ---PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIA 263 P +E+ I H +T+ ++ V +L RV + Sbjct: 74 LTSISLPQEEVAYIAIHL------AGKQTIYQTPDESSLVISDEVWQVVSDMLDRVWRVF 127 Query: 264 SLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 + + +L N+ H+ + + + ++++KA +P +F +++ T++ E Sbjct: 128 RFDFRNDLELRMNLARHIQPLSVRLRYNLKLKNPMLDDIKARYPLSFSIAVDASTVIAEA 187 Query: 323 LDIPLF--DSDLIGLYFACALERHQN---ERQPIILLSDQNAIATINQLAIERDVLN--C 375 PL + + L F ALER + ++ +++ + A + + R+ + Sbjct: 188 YGAPLSHDEIGYVALAFELALERSKTETVKKNILVICASGAGSARLLEYQCRREFGDYID 247 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 ++ +L I+ + L V V + E+ + L Sbjct: 248 QIQTCDALGLDKVDFSTIDYAFTTVPLNRELPVPVR---EVSCFLDPVEAERTRAVLRKE 304 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 R + ++ S + + A+ + + + + ARE Sbjct: 305 MRRPSALGADYLGRDLFFPHLACTSKAEVLDFLIARAEESRDVAPNFRELVFAREERMPT 364 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVN--NEVINHVLIACAAADARHELKIF-S 552 N +A+PH R L +PV E + V +A + D + F Sbjct: 365 AFGNNIAMPHPLEVASRDAFVCIGLLDEPVVWGAEGEEVQAVFLAGFSFDEDGSARTFLD 424 Query: 553 YLASILCQ-HPAEIIAGLTGYEAFMELL 579 A +L E + +EAF ++L Sbjct: 425 SFAGVLVDPQAIERLVTEQTWEAFADVL 452 >UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAW7_9FIRM Length = 642 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 79/634 (12%), Positives = 213/634 (33%), Gaps = 59/634 (9%) Query: 1 MLNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTL--NGKARIFASG 55 MLN+RQ++I+ T A++ VS RT+ D+ + L A + + Sbjct: 1 MLNQRQIEILLEFCNHSDEFLTASHFAKKLDVSLRTVQGDMKVIRKELADETCAELVSKA 60 Query: 56 SAGYQLEIFERRSFFQLLQK--------------HDNDDRLLALLLLNTFTPRAQLASAL 101 S G +++ F + LL LL + +L L Sbjct: 61 SKGSCIQVKNYDEFSAFVNSLYQQYTTVSLNYPTSRISKILLLLLNRHRAVSVMELEDKL 120 Query: 102 NLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLAN------LLRKDPF 155 + + + L ++++ E+ + ID E + LA ++ + Sbjct: 121 YISRSTLQNDLKKVEEVLEKFQLELLKSSNKVMIDGYEINKRRCLAEQDLYLAHIKNEQG 180 Query: 156 LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW--------- 206 ++ + ++++ T +++ +M D+ ++ IL + + ++ + + Sbjct: 181 MVYIDERQLAKIKNILTDIFVNYKYHIMDTDF-NNAILFLNIMICRMGEGFYIQPGELDI 239 Query: 207 -------PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLI-----EKQHQQAQVISADNVQG 254 + +I + + D +R + + + + + Sbjct: 240 SEQLGNEYEIAKAVFGKISRRFFIKVPDEEIRYFSLYLKGQGNNRDSDTITQEMDNFISE 299 Query: 255 LLQRVPGIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 + + ++ D L + H + + + + +N ++ +P +D+ Sbjct: 300 AFEEIRRNFGVDFTDNINLRITLALHCMSLSIRIKYDMQVKNDMLNYIRETFPLGYDIGA 359 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALERHQNE--RQPIILLSDQNAIATINQLAIE 369 +F LL +Q + + + L+ ++F +L + + I+++S T+ Sbjct: 360 YFAFLLHQQYGKRVSEDEVALLAVHFYSSLLELNSRQGNKRILVISALKNSMTLLMKQTL 419 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 + V + ++ + + ++ I + + V IK Sbjct: 420 LKWFSEYVSVIDFVNPMDVTEDMLDEYDIFLTTEKEEFFEKGLAMYVDTFPNQHDYMNIK 479 Query: 430 HFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 + + F +S+V+ + + + +C + A + + +++ R Sbjct: 480 LNIDGFKDIEDVADIFHPEL---FSSVKSSNKEEVLSMLCEKSTAYFQV-ENLHSQVLQR 535 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV--INHVLIACAAADARHE 547 E G ++A+PH +P+ + E ++ V++ + Sbjct: 536 EEIGSTFFSKQIAVPHPMYAVSSDTFVAVCVSKEPIIWDEEKNEVHLVMLMHIGKNNPQA 595 Query: 548 LKIFSYLASILCQHP-AEIIAGLTGYEAFMELLH 580 +++ Y + + E + Y F+ L+ Sbjct: 596 FQLWDYFSKMFADKSLVERLVEDPSYPNFIRLVK 629 >UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus pneumoniae RepID=B2ISN0_STRPS Length = 659 Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 83/655 (12%), Positives = 205/655 (31%), Gaps = 76/655 (11%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SA 57 LN ++ I+ L + T ELA+ S RT+ + + T+ + S Sbjct: 4 LNIKEKDILQFLIKNKERFVTSKELAEYLSCSDRTVRNVLKLIEKTMIIQGVRLISKQGQ 63 Query: 58 GYQLEIFERRSFFQLLQKHDNDD----------------RLLALLLLNTFTPRAQLASAL 101 GYQ+ + ++ + Q ++ ++ L LL LA L Sbjct: 64 GYQIFFENQGAYQEFRQTYELEEDYTKTAVSKGDDRLVFILNKLLFEQVPVLFDDLADEL 123 Query: 102 NLPETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + + ++ +++ E + SR G ++ E + + N ++ F + Sbjct: 124 YVSRSTLSHDFRKIRVMLSEYNLSIESRANKGVYVSGEERDKRRFIINYFLENQFFKTIH 183 Query: 161 GITRDNL--------QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGD 212 + N + D L D++ ++ AL + Sbjct: 184 CYVKFNFFDQTVPLEEFARIVLDECQEANLKLSDFVLQNLVVHIALSVIRLKSGFEIKNI 243 Query: 213 E----------------IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLL 256 + + ++ E + + +T + + QQ Q + + +L Sbjct: 244 DCQMTDDAIERKVAQRILSKVREVTNQEFPVQEIDYITLHLLAKSQQCQKNQKNISEEVL 303 Query: 257 QRVPGIASLNI---------IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 ++ N+ D QL+E + HL+ ++ +K + Sbjct: 304 KKSLFKTFQNLGLDDMYNFSSDFQLIEGLITHLMTLQVRLESRITLNNPLVDEIKQNYSD 363 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ--NERQPIILLSDQNAIATI 363 F M+ + + + L+ + D + + L+F A+ER + + + + + A + Sbjct: 364 IFFMTREILANMDKFLEWTISDDEVAYVSLHFLAAMERSKESTKFNILAICATGFGAAQM 423 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIE-PLLIINNSHYLLDDAVNNYITVKNIITA 422 + +E + RV + + +E+++ I++ V + + Sbjct: 424 LRNRLETEFGK-RVEVVDVIGYYELNQEKLKGIDFIVSAVDLSNLYFQIPVFKVSVFLKS 482 Query: 423 AGIEQIKHFL----------ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQL 472 +E I+ + ++ + + F ++ ++ ++ L Sbjct: 483 DEMEMIRKAMDQMQVSSYVQSSKINKFENNSFRQYFSKENFLICTESDKVNLLEKMVESL 542 Query: 473 V--AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE 530 + I RE + ++A+PH + + +N+ Sbjct: 543 SVGESNEFEQSLLYGIKQREELSSVVFSEKIAVPHPIQPFGTEGKVSVEICKDSLLWDNQ 602 Query: 531 V--INHVLIACAAADARHELKIFSYLASIL--CQHPAEIIAGLTGYEAFMELLHK 581 + V + + L + L + +E F+ + K Sbjct: 603 SSHVQLVFLLSPSIYGNEGLATVTKKIVSLTENDELQNQLISCNNFEDFINIFEK 657 >UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=Clostridium difficile RepID=C9XMT3_CLODC Length = 642 Score = 231 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 93/641 (14%), Positives = 215/641 (33%), Gaps = 64/641 (9%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSAG 58 +++R L + LL + T L+ VS RTI DI +N TL I G Sbjct: 1 MHKRLLTLFKLLNESDDKITCKTLSNHLKVSERTIRNDITSINGTLEKNGAIIKIKKGEG 60 Query: 59 YQLEIFERRSFFQLL----------------QKHDNDDRLLALLLLNTFTPRAQLASALN 102 Y ++I + Q L N L +L NT+ LA++L Sbjct: 61 YYIDILNLALYQQYLALISDDIMDSSEIPDSPIERNQYILKYILYNNTYIKLEDLANSLY 120 Query: 103 LPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAG 161 + + + + R+K + L S+P G ++ E ++N + F + G Sbjct: 121 VSKFTILNDIKRIKPILSKYNLILVSKPYYGVKVEGKEIDIRRCISNNMINRNFENYIIG 180 Query: 162 ITR---------DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYAL-------------- 198 IT D ++ +++ + D+ + A+ Sbjct: 181 ITDREIELFNNVDLIELQRVVLSEINKFNINFLDFNLKNFIIHLAITISRILDGYCLDNV 240 Query: 199 ---------RNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA 249 N + Y + I+ + N T + L++ + Sbjct: 241 LDVVLTDFQSNTTVENIFNYIESKYTIIISKADRVYLYNHFITKSSLLDNVSNRVDTKII 300 Query: 250 DNVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 + V+ +L+ + + ++ + L +++ H L + + +N +K+ +P A Sbjct: 301 EYVEEILEVINNQYTFDLRNDSVLFDDLVLHFKSILNSKSYNLNKVNPLINTIKSNYPLA 360 Query: 309 FDMSLHFITLLREQ--LDIPLFDSDLIGLYFACALERHQNE----RQPIILLSDQNAIAT 362 F+++L+ I + + + + + L+ +ER + +++ + Sbjct: 361 FEITLNAIEKVFKNSIYSLTEDEIGYVSLHIGAGIERFFQNNIKCKNVVLVCGSGYGSSR 420 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + ++ + + + I+ E + +II+ L+ + V + Sbjct: 421 LLEVQLNKVFHDKINILQCLSFNQFLASELSDVDIIISTI--PLNHDSIPIVLVDLKLLK 478 Query: 423 AGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADE 482 IE I + + N + + + + +C +L + Sbjct: 479 KDIENISKSITNNSHIYSNLLDNFFDKNLFIVNPKIKDKDELIKLMCNKLTQSEIVFPSF 538 Query: 483 AQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIACAA 541 A+ + RE I + LAIPH R + L +P+ + + +++ Sbjct: 539 AESVFYRESLSSTNIDDFLAIPHPMELSSIRTKICISILNEPIYWSEDSTVKLIMMLAIN 598 Query: 542 ADARHELKIFSYLASIL--CQHPAEIIAGLTGYEAFMELLH 580 D ++ + + + I+ ++ F+ ++ Sbjct: 599 KDDYIKINSIYDILLKIIHDNDIRDSISNCNDFDNFLSIIK 639 >UniRef50_C9A090 Predicted protein n=2 Tax=Enterococcus RepID=C9A090_ENTGA Length = 630 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 87/628 (13%), Positives = 218/628 (34%), Gaps = 51/628 (8%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKA-RIFASGSAG 58 + + L ++ L +Q T E+A + GVS +T+ R ++ +N + + I +G Sbjct: 6 MEKISLLLIRALSEQDGFMTTKEIAAKVGVSTKTVRRYVEKINQSQSLYGCVIQGKKGSG 65 Query: 59 YQLEIFERRSFFQLLQKHDNDD----RLLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 L+I F + L+ +D + + + + L L + ++ +++ L + Sbjct: 66 LFLQIINHELFQRSLENTPQEDFVTQIIEYFVQEDEYIKSELLCERLFISQSKLSQELKK 125 Query: 115 LKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLA--------GITR 164 L++ + ++P G + +E R + +N L+K Sbjct: 126 LRRILSHYNLSIQTKPYYGMKLCSSEFDLRRFMASNYLQKTHLKQLHQLPSSEGTPSQLH 185 Query: 165 DNLQHLSTACDNQHRWPLMQGDYLSS-LILAIYALRNQ--------------LTDEWPQY 209 +Q + A +Q +P+ + + LAI +R Q E Sbjct: 186 RQIQAIILAEFSQKAYPISEAIVTNLVNHLAIAVMRMQSGRYLDRNLPIGGRTNAEQSLL 245 Query: 210 PGDEIKQIVEHSGLFLGDNAVRTLTG-------LIEKQHQQAQVISADNVQGLLQRVPGI 262 +K+I E G+ + + G + + + +D V+ +L+++ Sbjct: 246 GKRIVKRIEEECGVLFTECERNYVLGQIVGKRVIPKNEKNVVSEEVSDLVRQVLKKIKNR 305 Query: 263 ASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLRE 321 ++ D L + H + + E + ++++K +D+++ ++ Sbjct: 306 RQIDFSQDLDLQTMLMLHFVPLIDRIELGIELKNPLLDDVKVHCNVGYDLAIIAGQVIVA 365 Query: 322 QLDIPLFDSD--LIGLYFACALER---HQNERQPIILLSDQNAIATINQLAIERDVLN-C 375 + + D + + ++F AL + + +++ A + E N Sbjct: 366 HFNKRISDHELSYLAMHFDVALNKKSSQTQRKYILVVNDLGRAANAFLKEKFEFYFRNYI 425 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 + + + E +E + I ++ + + ++ + I++I L+T Sbjct: 426 KEVTVCNQYEFAQFLKEQDFDFIFSSIDLPYEGTI-PVMSFDYFMRPEMIKKIADALSTV 484 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 F ++ FF P + E+ + + +C + Q+ + + + RE Sbjct: 485 FTVEKLLTFFKEP--LFICDQDFETKEEVLHFLCHCINEQYQMPNNFEALVFEREAFFGT 542 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLA 555 + +A PH L +P+ + + V + A + K + Sbjct: 543 DFLPMVAFPHPNVLIGSETVIAVAHLKKPIFWYKQSVRLVFLLVIAEQDHLKAKSLNDHL 602 Query: 556 SIL--CQHPAEIIAGLTGYEAFMELLHK 581 + + + F+ L + Sbjct: 603 IKICTSSEKVNELIATNDFITFIHHLKE 630 >UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U731_9LACT Length = 641 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 89/640 (13%), Positives = 218/640 (34%), Gaps = 65/640 (10%) Query: 3 NERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGK--ARIFASGSAG 58 + R+ +++ LL + +A++ G+S +T+ R+I +N L I +S G Sbjct: 5 SNRKKEMLSLLLKSDEYIKSDYIAEEIGISSKTVQREIKNINVLLRELKTDSIESSRGKG 64 Query: 59 YQLEIFERRSFFQLLQKHDNDDRLL----------------ALLLLNTFTPRAQLASALN 102 Y + + ++S + + +++ D L+ L + +LA L Sbjct: 65 YIIPLESKKSIQLVFKDYEDKDALVPNMQQSRIEWIIRKFAVLSMEKKECTLEKLADELF 124 Query: 103 LPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAG 161 + T + + + +K ++ LA G + E+ L+ + L + + L Sbjct: 125 VSLTTLKKDMNSVKDTLQKYHIQLAKISNKGLKLQGEEKNIRQLIVDYLVLEQSELKLDR 184 Query: 162 I----TRDNLQHLSTACDNQHRWPLMQGDY-LSSLILAIYALRNQLTDEWPQY------- 209 I + D + N ++ + D +LI+ + ++L + Sbjct: 185 IFSISSTDKVSVEEIVIRNIRKYQIPITDIGFRNLIIHVEIAISRLRFQNNSIDQKPNTI 244 Query: 210 ---------PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ----------QAQVISAD 250 K+I L + +N + + + Q + + + ++ Sbjct: 245 EEHSDEYYCAKAIAKEIEAKINLTIPENEIANIYLHLLGQKRMLVSEDTLESRLETPESE 304 Query: 251 NVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 ++ ++ + + L+ D L + HL L + +K +P Sbjct: 305 LIERVIVEINEMYQLDFRQDVILKNGLLLHLESALHRIRLNMPINNELIEEIKNNYPFPM 364 Query: 310 DMSLHFITLLREQLDIPL--FDSDLIGLYFACALER-----HQNERQPIILLSDQNAIAT 362 ++ + L +I + + + L+F ALER E + +++ + + Sbjct: 365 QLAKILASSLETNFNIKIDINEVGFLTLHFCGALERANSIQSNKEIRAVVVCTTGLGTSV 424 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + + ++ N + + + E + II ++ L + + I++ Sbjct: 425 LLKAKLQSKT-NLNIKVVGVYALYQLDDIEFTDIDIIISTVPLSKKYSIPDVVITPIVSN 483 Query: 423 AGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADE 482 IE+I F+ F ++++ ++ + +L I Sbjct: 484 NDIEKIHEFITYGSNEFSISSLF--CKELFFTDLNCKTKDECLSIMTDKLYQLSFIDDKC 541 Query: 483 AQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAA 542 + I ARE I N + +PH + R L P+ + +++ Sbjct: 542 KESIYAREEMATTEIGNGVCVPHNMDGKVFRSSICIGILKDPILWEFGKVQLIIMIVVDK 601 Query: 543 DA-RHELKIFSYLASILC-QHPAEIIAGLTGYEAFMELLH 580 A R ++F + + Q+ + + +L + Sbjct: 602 KAIREYNELFLEIYEKVDFQYKVDEFIKQKDFNYLKKLFN 641 >UniRef50_C0CWF4 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWF4_9CLOT Length = 630 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 81/628 (12%), Positives = 188/628 (29%), Gaps = 56/628 (8%) Query: 1 MLNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M +Q +++ +L Q LA GVS RTI + LN + G Sbjct: 1 MKTNKQNELLRILSDASQSIPSAALAGMLGVSERTIRNYVKDLNE---SGEASILASREG 57 Query: 59 YQLEIFERRSFFQLLQKHDNDDRLL-ALLLLNTFTPRAQLASALNLPETWVAE-RLPRLK 116 Y+L+ + ++L LL A L + + V +P++K Sbjct: 58 YRLQEVFGSREAAPSENEGRVWQILSDLLTGKDGVNAFDEAERLFISASTVINTIIPQIK 117 Query: 117 QRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL---QHLSTA 173 ++ +E+ + L+ ++ D + + L Q + Sbjct: 118 NVVREYDLSIESKNYQFYLRGSEQNKRRLIGHIATGDTYGFFNTKEALEQLFPQQDVHGI 177 Query: 174 CDNQHRWPLMQGDYLSSLILAIYALRNQ-----------LTDEWPQYPGDEI-------K 215 + YL+ L + L + E+ + Sbjct: 178 MQELYNICQESKIYLNDYSLNNLLIHILIILIRLNSDHCLGERETYISAGELLEALYDKE 237 Query: 216 QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG-------------------LL 256 +I+ + + + + ++ +QQ ++ A +V+ +L Sbjct: 238 EIIALADMISSNYRENYGIQIPKEDYQQILILIALSVEHEVVDIQSVISHEFICNVTSIL 297 Query: 257 QRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 V + + H+ + + LK + +DM++ F Sbjct: 298 SLVSERYCTPEFENDFILQFALHVYYAYQRCTYRIGYPNPIGPQLKKDYAPVYDMAVFFA 357 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQLAIERD 371 + + + + I +F LE ++ ++ I I++ ++ + I Sbjct: 358 HKFSKIYQVTFNEDEIAFIAFHFGAFLENNKQNKERITCAIVVESYHSFSRKLVNDISAA 417 Query: 372 VLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 V +S + + ++ V + + +++ Sbjct: 418 FHEQLLVTDVLPVSRFLQHPPGSDLIISTLPVDTGGRHTVRVNPILTRQNQDSIQKKLDE 477 Query: 431 FLATAFIRQQPERFFSA-PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 A + S ++ NV +S Q + + + ++ Q ++ R Sbjct: 478 IGAERELLHARTFLRSLFHKELYFRNVAQDSAQAYIKFMGGHCLEHGYVKEAFIQDVLLR 537 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELK 549 E + LA+PH S+ + + P+ N++ I+ +L+ + K Sbjct: 538 ESVSSTAFTDTLAVPHAISQFAEQSFICVVHNNMPIRWNHKAIHFILLVGITQEEMKYFK 597 Query: 550 IFSYLASILCQHPAE--IIAGLTGYEAF 575 L L + + +E F Sbjct: 598 SSFDLIIELFNSTSRTIELLKTNTFEEF 625 >UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZWZ8_ENTGA Length = 640 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 108/635 (17%), Positives = 220/635 (34%), Gaps = 61/635 (9%) Query: 5 RQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQL 61 RQ KIV+ L ++Q P LA + +S RT+ DI +L + SAGYQL Sbjct: 2 RQEKIVEYLYAKKQAIAPKALAAEFQISERTLANDIKWLRDIGRTEGFSIERIRSAGYQL 61 Query: 62 EIFERRSFFQLLQKHDNDDRL-------------LALLLLNTFTPRAQLASALNLPETWV 108 EI +++ F + L +++ L LL + Q++ L + + V Sbjct: 62 EISDKKKFLRFLSHAKRQEKIDNGNPNERIKNIELLLLFHEEYITMQQISEWLEVSLSTV 121 Query: 109 AERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDP------FLIPLAG 161 + +++ + L S+ G I TEEK+ + L+R Sbjct: 122 KADIKQVELFCKDYGLTLFSKAHYGLKIVGTEEKKRQAILYLIRNIIHTPVLTERYKAFH 181 Query: 162 ITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYAL-------RNQLTDEWPQYPGDEI 214 D S + + L D + I+ L N LT++ Sbjct: 182 FVFDEEALRSCLSEKLQQHQLKASDIVFENIIQHIRLLVFRITQNNTLTNDERTVRTATD 241 Query: 215 KQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI---------------SADNVQGLLQRV 259 K + L +T +++ + + ++ L+ V Sbjct: 242 KYDLLTEDLVSYLETAYPITFSTMEKNYLHEQLRGKFSVLDDRTSNQQLKQAIEKTLELV 301 Query: 260 PGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 D +L + H+ L + ++++ + F++++ FI+ Sbjct: 302 DLRYHTQFRTDQELGNALLMHVAPLLQRLYTGHQLDNPIIDDIYTQYANVFNVAMVFISE 361 Query: 319 LREQLDIPLF--DSDLIGLYFACALERHQNE-----RQPIILLSDQNAIATINQLAIERD 371 L + LD + + + +YFA +LE+ N+ ++ ++ S + + ++ +ER Sbjct: 362 LNKDLDADISKDEIGYVAIYFAASLEKQANQLIDDYKKIAVICSTGGGASYLLKVNLERL 421 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINN-SHYLLDDAVNNYITVKNIITAAGIEQIKH 430 N V +L+E+ I + + L+ + T+ N IE+ Sbjct: 422 FSNAEV-TTFALNEVDQIDKSFDLLISTVPLDQEQFAIPIIYTKTILNRAEINKIEKDLS 480 Query: 431 FLATAFIRQQPERFFSAPGS---FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 L + + F + + E + + A+L ++ Sbjct: 481 LLRESENKVFDVHQFILSLFDPQWFQIDTESEDYLQLLESEAARL-EDGWAEQGFKHSVL 539 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE 547 RE + + N +A PH + R I L + + + + I + + D + Sbjct: 540 EREKMIDTIYQNGIAGPHPMEQAAIREVIDVILLRKSIWYSKKEIKVIFLINIKKDHLNL 599 Query: 548 LKIFSYLASILCQHPA--EIIAGLTGYEAFMELLH 580 K S L + + A +A +T ++ F + Sbjct: 600 HKEISRLMIKMMEDQALDNQLAKITNFQDFKSYIQ 634 >UniRef50_B9YAP5 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAP5_9FIRM Length = 651 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 87/627 (13%), Positives = 193/627 (30%), Gaps = 51/627 (8%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 L++RQ + LL + +P + +Q VS RT+ ++ +N I S GY Sbjct: 24 LSQRQYLALRLLREYQKPIKGQQFSQLLNVSPRTLRYEVSAINRI--AGQPIILSNKEGY 81 Query: 60 QLEIFERRSFFQLLQKHDNDDR-----LLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 L + Q+ +DDR L+ LL L L + E+ + + R Sbjct: 82 TLN-EDPAVLQQIQDCRVDDDRQLEKQLILALLECKEASIYDLTQKLYVSESTIYSLVKR 140 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN------LQ 168 + ++ R G E + +L++ + + + D L Sbjct: 141 MMPKFHSFSLSLQRRGEWLSCQGKETDKRRMLSHFFFAEANALATTLVNFDGYFSPFGLA 200 Query: 169 HLSTACDNQHRWPLMQGDYLSSLILAIYALRN--QLTDEWPQYPGDEIKQIVEHSGLFLG 226 L+ +Q D + + I ++ + +P + + S L Sbjct: 201 ELAQIIHETLDELDVQIDDIYIKNIIICIAVCVQRMINGYPSDGSETEADALPISTSPLL 260 Query: 227 DNAVRTLTGLI--------------------------EKQHQQAQVISADNVQGLLQRVP 260 V T G + E + ++ LL + Sbjct: 261 TRFVDTTCGRLQEQLELTFTEADKATILAFITGSFPEENEQILQNERFRGQIRKLLDKTF 320 Query: 261 GIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 L + + + +N H+ L +L+ + P +D++++ L Sbjct: 321 RHFQLELDYSAVFDNFVLHVHFLLLRCRHQNFFHNDFATSLRTSHPFIYDVAVYLAYQLE 380 Query: 321 EQLDIPLF--DSDLIGLYFACALERHQNE--RQPIILLSDQNAIATINQLAIERDVL-NC 375 ++ + + LI +Y + I + + + + + + Sbjct: 381 KEFQAAIPGDEIGLIAIYLGSIATYVPTYDLPRVICICPQYHELRKLMVQQLTEKLSCTL 440 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 ++ S + ++ + L + L D + + + ++ F+ Sbjct: 441 DIVKIVSSLSEITDQDHADFYLSTVKTENSLTDLIPISPILSPLEIHRIEKKNLEFMKAQ 500 Query: 436 FIRQQPERFFSAPGS-FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE 494 R+ + + N + I L + I + RE Sbjct: 501 KRRKLRQNLLRFFDDQLFFCNHGLTTEVEILTFFDQLLQQRGVIDNQFMDSVRQRESLSS 560 Query: 495 NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYL 554 NR A+PH + + + +P+ + +N VL+ + +D KI++ + Sbjct: 561 TAFFNRFAVPHSLEKDALLTKVVYYYSDEPIRWYDSRVNLVLLILSRSDDEQASKIYNLI 620 Query: 555 ASILCQHPA-EIIAGLTGYEAFMELLH 580 IL + + + M+ L Sbjct: 621 FDILIDESCYKKMILCRSRQELMDFLE 647 >UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus halodurans RepID=Q9K679_BACHD Length = 700 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 113/693 (16%), Positives = 205/693 (29%), Gaps = 122/693 (17%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ++ R+ I+ L Q T +LAQ VS RTI RD+ + L SAG Sbjct: 3 ISARERNILHQLLQHKDGLTIPKLAQLLDVSTRTIQRDLKGIEDILAEYGLKLNKSSAGL 62 Query: 60 QLE-----------IFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 + + + + L LL LA LN+ + Sbjct: 63 VISGGPSEQEKLLGFLQTLELNEFTPEERQMLLLAILLQHREPLKLFTLADELNVTVATI 122 Query: 109 AERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD-- 165 + L R + L + G G I E ++ LL + + + + Sbjct: 123 SNDLTRAEAWLNGFRLELVRKRGYGVQIIGRESDIRRAISQLLAEHLTESKMYRMLSEPL 182 Query: 166 -----------------------------------------------NLQHLSTACDNQH 178 + HL+ A + Sbjct: 183 DDWEQTDAISERLLHLINLELVRNIQEVLADFRKQMVEPMADRAYIGLIVHLTLAIERIR 242 Query: 179 RWPLMQGD--YLSSLIL-AIYALRNQLTDEWPQ-----YPGDEIKQIVEHSGLFLGDNAV 230 + ++ D YLS L + + L L Q P E+ + H G A Sbjct: 243 QGEKIEIDPSYLSKLKMDKEFELAADLARRLEQKLGMNIPEAEVGYMTMH---IRGAKAH 299 Query: 231 RTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWI 290 L+E+ + Q V V+ L+ V + D L + + HL L Sbjct: 300 IETESLLEESNFQLGVR----VKALIHEVEKSLHVQFQDPSLFQGLVAHLKPALYRIREK 355 Query: 291 AEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNER-- 348 + + +K + F + + E + IP ++ + ++F ALER + +R Sbjct: 356 MKIYNPLLEKIKQDYEELFHVVQVKGNKVFEPITIPEEEAGFLVMHFGSALERLKRKRTL 415 Query: 349 QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDD 408 + +++ S + IE++ I S EL L + + Sbjct: 416 KVLVVCSSGIGSSKFLASRIEKEFPEIASIEQASFFELGEKNLHDYDLFLSTIPLHADVK 475 Query: 409 AVNNYITVKNIITAAGIEQIKHFLAT---------------------------AFIRQQP 441 + + L A + Sbjct: 476 HFVVQPFLPPHEVKQIRAYLDEKLREPSAVTETGQASLQVAEGGSNVLAIERFAHFAKLN 535 Query: 442 ERFFSAPGSFHYSN-VRGESWQHITRQICAQLVAQHHITA--DEAQRIIAREGEGENLIV 498 + + F RG S + +IC L + +T AQ +I RE G I Sbjct: 536 QDIYQVLSHFQLIQVERGISIEEGIERICRSLEKKGILTNGGGVAQALIERERAGGVAIP 595 Query: 499 NR-LAIPHCWSEQERRFRGFFI-----TLAQPVEVNNEVI---NHVLIACAAADARHELK 549 N LA+ H S +L + + +N +I VL+ L+ Sbjct: 596 NTSLALFHTRSRDVTIPYFAMYEWGTPSLRKGM--DNSLILVERVVLMLAPQDLEEVRLE 653 Query: 550 IFSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 S+L++++ + + +A +++ Sbjct: 654 YLSHLSTLIIESEETMRLFERASEQAVFARIYE 686 >UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 Tax=Streptococcus RepID=B9DU03_STRU0 Length = 655 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 92/660 (13%), Positives = 199/660 (30%), Gaps = 90/660 (13%) Query: 1 MLNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKA--RIFASG 55 ML +++ I+ L T ELA+ S RT+ I L + K I + Sbjct: 1 MLGQKEKLILQYLYLNRGNFVTSKELAEHLSCSDRTVRTYIKTLISFIEKKEGLEIISKQ 60 Query: 56 SAGYQLEIFERRSFFQLLQKHD-------------NDDRLLALLLLNTFTPRAQLASALN 102 GYQL++ + L+ ++ ++ + L+ L L Sbjct: 61 GYGYQLDLANESVYLNLISDNNIRLGTENIDINDRHNFIINQLIFEQKEIFFDDLMDQLY 120 Query: 103 LPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAG 161 + + ++ +++ R + SR G ++ E + + + FL + Sbjct: 121 VSRSTLSSDFKKIRHELARYDLKIESRANKGVYVSGAEHNKRHFIMDYFFSGNFLKNIHQ 180 Query: 162 ITRDNLQHL--------STACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW------- 206 D+ L D L D++ ++ AL ++ Sbjct: 181 YVGDDFFKLPISFEELTIIVLDECRSQSLKLSDFVIQNLIVHIALAISRVNDGFKISQLS 240 Query: 207 -------------------------PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQH 241 +P +EI I H L ++ T ++ Sbjct: 241 IDEKKFKTEILVATNILRRVEYVTGTDFPTEEINYIALH----LISESIHTDNSESLERI 296 Query: 242 QQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 Q +S + D +E + HL L +++ Sbjct: 297 SLRQDLS-----EAAAEIDLHYGYQFAQDFTFIEGLLKHLEVLLERVKNNVRLDNPLLDD 351 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER--HQNERQPIILLSD 356 +++ + AF +S ++ L + L D + + L+ +ER N+ +++ + Sbjct: 352 IQSQYKEAFVISRSLMSHLNYFKEFHLSDDEIAYVTLHLLAGIERFYQNNKLNALVICAT 411 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 A + ++ +E ++ I+ + LII+ TV Sbjct: 412 GYGSAQMLRMRLENELGRQLNIVNLVGYYDITDARLEGIDLIISTIDLSNLVFSVPVFTV 471 Query: 417 KNIITAAGIEQIK----HFLATAFIRQQPERFFSAPGSF-------HYSNVRGESWQHIT 465 + ++ IK H + Q+ S SF + + + + Sbjct: 472 SVFLKDEEVQMIKDGLLHLESKHHRSQKESGSLSDQSSFTRYFSKDRFIILEKSDKKTVL 531 Query: 466 RQICAQLVAQHHITA--DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQ 523 ++ A L I RE + +A+PH ++ + + Sbjct: 532 SKLVALLDDGDCEEYQVSMLDLIANRESMSTVIFDQEIAVPHPLKAIDKEGKIGVAIVPD 591 Query: 524 PVEVNN--EVINHVLIACAAADARHELKIFSYLASILCQHPAEI--IAGLTGYEAFMELL 579 V+ I + + + L + L L ++P I ++ F ++ Sbjct: 592 GVDWEEGFNAIKIIFLVSPSIYKNDGLSSMTKLMVDLTENPQAKEAIIKSQTFDEFKNII 651 >UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_9MOLU Length = 613 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 96/618 (15%), Positives = 209/618 (33%), Gaps = 46/618 (7%) Query: 1 MLNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 M+++ Q I+ L + L+ +S R++ I +N + SGS GY Sbjct: 1 MMDKNQKMIILELMNHETVSGSNLSSVIKMSTRSVRTIIKNINEDI--CGAKIESGSFGY 58 Query: 60 QLEIFERRSFFQLLQKHDN---DDRLLALLLL----NTFTPRAQLASALNLPETWVAERL 112 +L I +F LQ+ N + RL L N + L L L T + + L Sbjct: 59 RLTIETPETFLAYLQRDQNGKEESRLAYLFNRFIDCNNYLKIDDLCDELYLSRTQLKQSL 118 Query: 113 PRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLS 171 L++ +A++ G +++ E + +A+ L I + ++ Sbjct: 119 KELREYLHDFDLTIATKAYYGMYLEGDEINKRRAIAHFEEYQMDFDILQRIRDIVISSIA 178 Query: 172 TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSG--------- 222 A + + + ++ L +A Y + + +EIK+ E+S Sbjct: 179 NA--DYVISDDVLDNLVAHLYIAYYRVMKKEYANIDSEWLEEIKEEKEYSLGCAIMELMN 236 Query: 223 -----LFLGDNAVRTLTGLIEKQHQQ-----AQVISADNVQGLLQRVPGIASLNII-DAQ 271 + + L K +Q D V+ +L + +A++ D Sbjct: 237 KIMAMEYRIEEVAYLTMHLCGKNSKQLSNNYINQEILDIVKEMLMIIEKVANIPFQADLN 296 Query: 272 LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD 331 L ++ HL+ + + + +K+ A+++++ ++ ++ + L + + Sbjct: 297 LQLALSLHLIPLVKRIQYGTFMHNPLKDEIKSKLIMAYELAVKACVVINQRFNCTLSEDE 356 Query: 332 --LIGLYFACALERHQ---NERQPIILLSDQNAIATINQLAIERDVLN-CRVIIARSLSE 385 L+ +LE+ + + +++ S A + + + + + + SL E Sbjct: 357 IAYFALHINLSLEQKKYNFHRNNILVVCSSGVGSARLLEYFFKENFNDYIEHLEVCSLHE 416 Query: 386 LVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFF 445 L I + + A+ I + I Q Sbjct: 417 LENISLTKFDCIFTT-----VPLAIKVNIPIFLINNLINQRDTIKITNNLKQLNQANILD 471 Query: 446 SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPH 505 P ++ S + +I + + + AD Q ++ RE + +A PH Sbjct: 472 YFPEQLFFTYESFSSKEEAIHEIINECKKSYDLPADFEQYVLQREALATTEFNDLIAFPH 531 Query: 506 CWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEI 565 L +P+ I +L++ A EL F + S + Sbjct: 532 SNKPVSNATFVAVTILKKPLLWKKHKIRIILLSAIENKAIKELDDFYKIISNIISDSTIQ 591 Query: 566 --IAGLTGYEAFMELLHK 581 + Y+ F E++ + Sbjct: 592 WNLINNPNYQYFKEIIER 609 >UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Geobacillus RepID=C9RTV4_GEOSY Length = 714 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 95/707 (13%), Positives = 201/707 (28%), Gaps = 134/707 (18%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GSA 57 L+ER I+ L ++ + EL ++ +S RT+ DI+ +N+ L ++ Sbjct: 3 LDERSTAILQELVRRDGYLSVKELIKKFNISRRTVYYDIEKINYWLKINHLDEVKYVRTS 62 Query: 58 GYQLE----------IFERRSFFQLLQKHDNDDRL-LALLLLNTFTPRAQLASALNLPET 106 G+ + + ++ K + RL + LL+ L+ + Sbjct: 63 GFYITERTKQAILEKLKNSEAWNYAYSKKERLARLAIHLLVEEPPHFLKDLSEKTKVSRN 122 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK------------- 152 + L +L+ + L G+ I EE + + L Sbjct: 123 TTIKDLKKLRAQLNSFQLTLCFTRYTGYVIKGKEEDKRRAIVYYLSLVIPHQQNWQTVLA 182 Query: 153 --DPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALR----------- 199 LI + L L D + + +L ALR Sbjct: 183 NLKRLLIHDEDESTTVLSELRNILDVLNECEKNLNIQFADDVLYHLALRFWLFGKRIVQG 242 Query: 200 ------------NQLTDEW---------------PQYPGDEIKQIVEHSGLFLGDNAVRT 232 Q T E+ P DE+ + H + + Sbjct: 243 KKIDFDPVEKEVIQQTKEFEAAQTARSKLESIFQTSIPDDEVYYLATHLLSSKVQYSGNS 302 Query: 233 LTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVE-NITGHLLRCLAAPVWIA 291 L + ++ Q + VQ ++ + + + VE N+ HL + Sbjct: 303 LQSHDDYKNLQ------NIVQKMVTEFQAFTCITFPNRKAVEENLLLHLKPAYYRIKYGL 356 Query: 292 EHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALE----RHQ 345 + + +K + F ++ I + + D + LI ++F L + + Sbjct: 357 QVENPMIELIKTKYKDLFLITKKVIHHFETAIGKKVSDEEAALIAIHFGGWLRKEGIQPK 416 Query: 346 NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYL 405 ++ I++ + +TI + +E + S+ + + Sbjct: 417 ERKRAILICASGIGTSTILRKQLEGLFSTVDFVETISVRDYEQRDFHDIDFAVSTVPVSK 476 Query: 406 LDDAVNNYITV---------------------------KNIITAAGIEQIKHFLATAFIR 438 V + ++Q + Sbjct: 477 KKHPVFVVNPILTDQEKETLLKKVHALFGESASQNTKYSPEAILGIVKQYADIKDEQALM 536 Query: 439 QQPERFFSAP-----------------GSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 + +F P + + ESW+H L+ IT Sbjct: 537 TALKEYFYKPSIPKNWTRKPGLLDLLSLEYIQIATKVESWEHAIELASKPLLQTGKITQQ 596 Query: 482 EAQRIIAR-EGEGENLIV-NRLAIPHCWS-EQERRFRGFFITLAQPVEVNNEV---INHV 535 +I + G +I+ ++A+PH E ++ + L +PV + + + + Sbjct: 597 YVIAMINHIKNLGPYIIIAPKVALPHGRPDEGVKKPGISLLVLKEPVSFSEKKEHDVQLI 656 Query: 536 LIACAAADARHELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELLHK 581 + + D L S L+ + + E L K Sbjct: 657 FVLA-SVDPEIHLHALSILSECFQSSEFVQELIRCYTPEEIWLYLKK 702 >UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_9MOLU Length = 628 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 95/628 (15%), Positives = 230/628 (36%), Gaps = 51/628 (8%) Query: 1 MLNERQLKIVDLL---EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GS 56 MLNERQ +I L + ELA + S +T+ + + L S S Sbjct: 2 MLNERQKQIFLCLDENKNSFIKGIELANKVNCSLKTLQNTVKEMKIILEKYQLEIISMTS 61 Query: 57 AGYQLEIFE---RRSFFQLLQKHDNDD-----------RLLALLLLNTFTPRAQLASALN 102 GY L I + F QLL + D+ L LL N F LAS + Sbjct: 62 KGYNLIIHDQQEYNDFKQLLLESDDKKDFNNQGYRITYILSTLLSDNHFVKADDLASQMY 121 Query: 103 LPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAG 161 + + V+ L +K+ E+ + +P G + E+ + + + + + Sbjct: 122 VSRSSVSSDLKIVKRVLEKYQLKIEHKPNYGMIVVGLEKDKRDCIIK--EQLELQLGHST 179 Query: 162 ITRDNLQHLSTACDNQ------HRWPLMQGDYLSSLILAIYALRNQLTDEWPQ------- 208 I ++ L +S + ++ + + + ++I +++ + + PQ Sbjct: 180 IKKEWLATISDIVVDSLMKAKYRISDVVLQNLVLHICVSIQRMQHGIYIDNPQMARQYGH 239 Query: 209 ---YPGDEIKQIVEHSGLFLGDNAVRTLTGLIE-----KQHQQAQVISADNVQGLLQRVP 260 + ++ + +N + L + +++ V G+L+ + Sbjct: 240 EHVIAKKILDELASIYHFIITENEISFLAIHLLGKRSYEENDLISKEIDYFVNGMLEEIK 299 Query: 261 GIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 ++ D +L ++ HL+ L + + + + +++A +P A+D+++ + + Sbjct: 300 IKTDIDFYGDVELKISLALHLVPLLVRLESQMQLQNTMIQDIQANYPLAYDVAVIAASYI 359 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQNE--RQPIILLSDQNAIATINQLAIERDVLNC 375 EQ L + + ++F+ +L + +N+ + ++++ + + N Sbjct: 360 SEQKHYQLSSDEVGYLAVHFSLSLSKKENKINPKKVLIICNARRGDYLMIQHTFLKEFNE 419 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 + ++ L + ++ I + + + I I++IK+ L Sbjct: 420 MISDLEIINALEIPQYNLDDYDCIFATFLNHPLIPKRALRINFFIDQKDIQRIKNSLQGQ 479 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 + ++F + + ++ + + + +C + D Q I RE G Sbjct: 480 SEAGELLKYFK--EEYFMGMIDAKNQKEVIQLMCEVANKYNEFEEDLFQSCIRREELGST 537 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLA 555 +A+PH ++ L +P+ + + + + C + +L++ Sbjct: 538 AYGQLIALPHPDHLISQKTIVITAILDKPIVWSKQKAQLIFLICVEKGNQKDLRVLFECI 597 Query: 556 S--ILCQHPAEIIAGLTGYEAFMELLHK 581 S ++ Q + + Y+ F + L K Sbjct: 598 SKFMMDQQSVQDVICRGDYQTFTKNLGK 625 >UniRef50_A8RD41 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RD41_9FIRM Length = 641 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 94/641 (14%), Positives = 196/641 (30%), Gaps = 68/641 (10%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +NE I+ LE+ T E+A + +S RTI + I LN + + GY Sbjct: 1 MNEIATSILSTLEETDAWITSSEIAHRLNLSTRTIKKYIAELNEEAEN---LIEASRKGY 57 Query: 60 QLEIFERRSFFQLL---------QKHDNDDRLLALLLLNT--FTPRAQLASALNLPETWV 108 +L F L + L+ LL +L L + E+ Sbjct: 58 KLNKDCLAQFRSQLLTQHDIPQTPEERIHYILIRLLFEKHSSKLSAYELIDELYISESTF 117 Query: 109 AERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL- 167 ++ C +I TE+ + +L + + ++ D L Sbjct: 118 RSDCQKINTICMDFHCTLEVAKDMLWISGTEKNKRKILNSFIFQEYQKHFGDDFFIDELF 177 Query: 168 --------------------------------QHLSTACDNQHRWPLMQGDYLSSL--IL 193 +H++ A + Sbjct: 178 PELDFSFIKNTVKQTFEQFHYFANDFSLNNFVRHVAIAIHRIQNGCNEALTETDEITKDT 237 Query: 194 AIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGD---NAVRTLTGLIEKQHQQAQVISAD 250 Y + QLT + ++ + L N T + D Sbjct: 238 LEYQMAIQLTKTFEEHFKITFSTTEIYELTLLIICRGNHFNTNHVNSTEISTFVGAELID 297 Query: 251 NVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 V+G++Q + +++ + + HL L + N++K P ++ Sbjct: 298 FVRGMIQNTKQMFGIDLESEEFISRFCVHLHNLLIRNTNNLLNSNPLKNSIKLQCPFIYE 357 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ---NERQPIILLSDQNAIATINQ 365 M+++ ++E I L D + I + LE + ++ +++L + + Sbjct: 358 MAVYMANQIQEHYHIHLNDDEITYITFHIGGILEMQKLIQSKLTAVLVLPEYYNLTASLT 417 Query: 366 LAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI 425 IE +I+ + I L++ + + +++ +T I Sbjct: 418 SKIEAQFQEELLILEVFATMEEYHASGIVADLLLTSISHKSYH-DTQLVSITPFLTQNDI 476 Query: 426 EQIKHFLATAFIRQQPERFFSAP-----GSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 +I+ + + ++ E F + + IC++L +H + Sbjct: 477 VKIRQSITSIKAQKMEEHRQRNIRKIFKKEFFSHKNSYATGEEAILDICSKLQQKHCVNE 536 Query: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 AQ ++ RE A+PH R + + + + I+ + + Sbjct: 537 SYAQEVMEREALSSTAFG-GFALPHSLHMNCLRTTIYVHIQEKGIIWGKQTIHVIFLLSV 595 Query: 541 AADARHELK-IFSYLASILCQ-HPAEIIAGLTGYEAFMELL 579 + R + IF Y+ I+ I YE F+ L Sbjct: 596 SKQERKMFREIFEYITDIINDAEKFSKIRKAKTYEEFIHLF 636 >UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli RepID=C2BXN0_LISGR Length = 646 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 88/640 (13%), Positives = 199/640 (31%), Gaps = 63/640 (9%) Query: 1 MLNERQLKIVDLLEQQ-PRTPGELAQQTGVSGRTILRDIDYLNFTL--NGKARIFASGSA 57 +L + ++++ L + T ELAQ VS +T + + L +L + I Sbjct: 4 ILEYKYIEVLKYLIEHRHTTYNELAQYLNVSTKTASKYVRILQESLAEEEEVAIHVKPRF 63 Query: 58 GYQLEIFERRSFFQLLQKHDNDD---------RLLALLLLNTFTPRAQLASALNLPETWV 108 G ++ E LL + LL LA L + + Sbjct: 64 GIEMVGTEEAWLSILLSMQRPKNDSIQDRITHVYSRLLNTKGHLKIQDLADELFVSRATM 123 Query: 109 AERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLL------------RKDPFL 156 + +++R E+ G ID TE+ + +++++ K L Sbjct: 124 ENTIKEIRKRLEKEGVAIVSNRNGLKIDATEKMKRHFMSDVISYYWGGVTATNLFKKEEL 183 Query: 157 IPLAGITRDNLQHLSTACDNQHRWPLMQG---------DYLSSLILAIYALRNQLTDEWP 207 + D + + L +Y + A+ + + Sbjct: 184 ELGINMIGDTTNIIDVNLLHSITNVLNIFIESTSLQVTEYEYQSLSIHLAIAIERIKKNF 243 Query: 208 QYPG------------DEIKQIVEHSGLFLGDNAVRTLTGL--------IEKQHQQAQVI 247 + +++E + R + + Sbjct: 244 YIDKKIAPANAPSKYATLLIELLEEKFQIQLPDYEREYIDIHILAIEKSSLNDTDGEMLQ 303 Query: 248 SADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 D+ + L Q + D +L+ ++ HL + +K + Sbjct: 304 VLDDSEKLQQIIRSTLGGYSPDEELINSLLVHLNAAVKRLKLEVSIHNPYTEEIKGNFSG 363 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH-QNERQPIILLSDQNAIATIN 364 AF +S+ + + I L + + I L+ L+R Q +R+ I++ S + + Sbjct: 364 AFAISIELASAIEAGFAIKLNEDEIAFITLHIQSFLDREAQTKREVILVCSSGYGTSKLL 423 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 + I + + + + L + I+ LII+ ++ + + + V ++T A Sbjct: 424 EQRIRQTFGA-ALHVKQVLGIRDLQKANIQDELIISTI--PIEKSNSPILVVSPLMTNAD 480 Query: 425 IEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRG-ESWQHITRQICAQLVAQHHITADEA 483 I++I FL +F + G E + +I + L+ ++ Sbjct: 481 IQKINTFLTKHTTSSSDVFLKLLKKTFVCISTAGPEKRNAVLEKITSTLLTHGYVHEGIY 540 Query: 484 QRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD 543 + + RE + A+PH + ++ N + + V Sbjct: 541 EGSLKREKLASTAMG-MFAMPHAEITYVNKPSISMYVNENGIDWNGDTVQVVFFFALNQA 599 Query: 544 -ARHELKIFSYLASILCQHPA-EIIAGLTGYEAFMELLHK 581 +I++Y ++ H + + Y +L + Sbjct: 600 VKESINQIYAYFNEVISNHKVMKKLPHCKTYSEITNVLKE 639 >UniRef50_A5KJK5 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJK5_9FIRM Length = 626 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 98/621 (15%), Positives = 212/621 (34%), Gaps = 52/621 (8%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYL-NFTLNGKARIFASGSA 57 + E+ ++++ L + EL + G+S RT++R + L +L I Sbjct: 1 MQEKYKQLLEALLESSKEFLNSQELGELAGISQRTVIRYMKELKEQSLKYGFFIHTVKGR 60 Query: 58 GYQLEIFERRSFFQLLQKHDNDD--RLLALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 GY+LEI E F L ++ + ++L L LA L+ + ++ + ++ Sbjct: 61 GYRLEIIEEEKFRDALAVEEDVEVTKVLFKLFFERTCKLDDLAELLHYSRSGMSRIIEKV 120 Query: 116 KQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKD--PFLIPLAGITRDNLQHLS- 171 +++ ER L ++P +G FI +E L LL+K + + R+ L + Sbjct: 121 EKKLEREGLRLLNKPYVGFFIGGSEVYIRNYLYKLLKKKSLEETEKIFRVPREMLAKVRS 180 Query: 172 -----TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGD-------------- 212 A + H+ + +L L++ + T + + Sbjct: 181 EIDAELAQKSVHKRKENELFFLKYLLIQKQRIAIGKTIKTDYFANISQTVHLNHDMEVVR 240 Query: 213 EIKQIVEHSGLFLGDNAVRTL------------TGLIEKQHQQAQVISADNVQGLLQRVP 260 I++ +E S D + + G ++ +++ D + QR+ Sbjct: 241 NIQKRIETSVCPKSDEEIENIYLALVYRQAFWQNGYVDSINEKNLQFYQDMTERAFQRIK 300 Query: 261 GIASLN-IIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 ++ D LV + HL + + E N++ ++P A+ ++ + Sbjct: 301 NDYKVDLFQDDILVNGLVLHLASNFSRYLLGMETENLFYNDVLESYPTAYYYAMEVAEEI 360 Query: 320 REQLDIPLF--DSDLIGLYFACALER--HQNERQPIILLSDQNAIATINQLAIERDVLNC 375 + L + +G++FA LER + + I+ A + + + + Sbjct: 361 SVWTKLSLSKYEISFLGMHFASYLERSLKSKKWKCAIIYGSGIGSAKLLESRLHNKYPHL 420 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 VI L E EE + I + ++ + ++ ++ + Sbjct: 421 EVIGTGLLEEAGKKAEEAD-FFITTFPVEEPEIMGKPWVRLSPMLDIKEQIALEQLVGNL 479 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 ++ + + + +C + IT EA+ I+ RE Sbjct: 480 ARHRKWRYESVSKMYLYIDQYME--KIELLNYLCDLCREKRFITEQEAEGIVGRENLVST 537 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLA 555 IV +A+PH E F L +P+ + V++ C + Y+ Sbjct: 538 EIVEGIAMPHGLIEGS--SFLVFALLKEPIIWGRTSVKLVVMGCFQRGDERMKEELEYIF 595 Query: 556 SILCQ-HPAEIIAGLTGYEAF 575 + + E Sbjct: 596 HLFLNLEDKNRLLSCKSAEEI 616 >UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6G9_9CLOT Length = 673 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 84/647 (12%), Positives = 229/647 (35%), Gaps = 67/647 (10%) Query: 2 LNERQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAGY 59 ++ ++ KI+ L + + +A++ V+ R++ I LN L A+I GY Sbjct: 23 IDYKEFKILTLCKNKEFANINHMAEELKVTTRSVRTYIKQLNENLGEDIAQIIYVKGYGY 82 Query: 60 QLEIFERRSFFQLLQKHDN--------DDRLLALL----LLNTFTPRAQLASALNLPETW 107 +LEI + +F L +++ D+R+L LL N QLA +++ T Sbjct: 83 KLEIKNKEAFELLFEENKKISFDFNVKDERILYLLDFFTEYNDVITIDQLAEQISVGRTT 142 Query: 108 VAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 + + ++ E L + G ++ E + +LL N + KD + Sbjct: 143 IVNDIKSTREILNEYNLDLIKKQNFGMWLKGNEFDKRLLLINYIYKDSKNDLKNSKYVNG 202 Query: 167 LQ---------HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPG------ 211 + + + + Q + + + +R + +E +Y Sbjct: 203 VDARLLKQLKTKILRLFKEDNFYATNQIFEETIKYILVQIVRIKNGNEIVEYDKRFDLLG 262 Query: 212 -DEIKQIVEHSGLFLGDNAVRTLT-------------------GLIEKQHQQAQVISADN 251 + + + + + +N TL Q + +D Sbjct: 263 SYDEYNLSQKIKVIVEENFDTTLNEYETLYLTLPLVSGNAAPISKFMSNKPQLRENISDL 322 Query: 252 VQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDM 311 ++ + + + + I D L +N+ HL L ++ + + + ++K + +++ Sbjct: 323 MEKIFKEIYIRMGIIISDQTLRDNLGYHLEFTLNRLLFNIKLKNLLLEDMKENYVLPYNL 382 Query: 312 SLHFITLLREQLDIPLFDSD--LIGLYFACALERH---QNERQPIILLSDQNAIATINQL 366 + ++ ++ + + + I ++F LE++ ++ I+ S + + Sbjct: 383 AKISADVIENVYNLVMPEDEIGYIAIHFGSYLEKNIISNTLQKVAIVCSTGLGATNLITI 442 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 I + + I S+ ++ + L+ + + ++V T+ + Sbjct: 443 RIRKIIGENVEIDTFSIFDIDKVNLSQYDLVFTTSDIDINSNSVLKIDTILDESKLRNKI 502 Query: 427 QIKHFLATAFIRQQPERFFSAPG--------SFHYSNVRGESWQHITRQICAQLVAQHHI 478 + +L + + + A ++S + ++ + + +++ + Sbjct: 503 EKMIYLNNSNLSKNINNVKLADNLIVGVFLHEKYFSVLNNKTISAALKNMIDKMMQDGVV 562 Query: 479 TADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA 538 + I+ RE + + L +PH +++ L +P++ I +++ Sbjct: 563 GEKFKKDILEREKSHPTIFKSGLLLPHSVNDKSNELCVSIGVLQKPIQYQGIEIKIIMLI 622 Query: 539 CAAADARH---ELKIFSY-LASILCQHPAEIIAGLTGYEAFMELLHK 581 + D ++ +K++ L+ + ++ + L K Sbjct: 623 AFSGDDQNSDLLVKVYEEALSIGQNEKYINQLSKCRDFYDLTRTLLK 669 >UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJT4_9FIRM Length = 705 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 93/690 (13%), Positives = 204/690 (29%), Gaps = 118/690 (17%) Query: 3 NERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 + R + I+ L T G +A++ GVS +T+ R++ + L G Sbjct: 4 SARAIAIIQCLLDGSDMVTAGTIAEKLGVSSKTVSRELPKVELLLRTYGLELL-RKTGAG 62 Query: 61 LEIFERRSFFQLLQKH-----------DNDDRLL--ALLLLNTFTPRAQLASALNLPETW 107 ++I S LL++ +L LL LAS L + + Sbjct: 63 IQITGDPSKIDLLRQDALNTETAAYTPQQRQIILAGQLLQATEPIKLFSLASMLKVTDGT 122 Query: 108 VAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKD------------- 153 V+ L +L+ + R L RPGLG ++ +E L +L + Sbjct: 123 VSHDLDKLESWLKQRGLLLVRRPGLGAYVKGSERDIRRALVEILYTNLDEERLLQLFHDP 182 Query: 154 ------------------------PFLIPLAGITRDNLQ-------------HLSTACDN 176 L L L HLS A Sbjct: 183 EQGTHKGAGAAEQYLLKLVDKQMIHDLEQLVHEVESGLPHHLSDTAFIGLVVHLSLAIQR 242 Query: 177 QHRWPLMQGDYLSSLIL---AIYALRNQLTDEW-----PQYPGDEIKQIVEHSGLFLGDN 228 + + D + L Y + +L + P DEI I H L Sbjct: 243 MRKKEDIHIDTATLAALRKRREYRMAKELARRITAQFQTEVPEDEIGYITMH----LMGA 298 Query: 229 AVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIID-AQLVENITGHLLRCLAAP 287 G E + +++ ++D +L + HL ++ Sbjct: 299 RSFYRKGDDEVVSVMDNFHLVRMARSIMKCAQQETGRKLLDNKELFLGLVNHLGPSISRL 358 Query: 288 VWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALER-- 343 + R + +++A+P +++ + + ++L L +++ I ++ AL Sbjct: 359 RMHMDIRNPLLEEMRSAYPELMELAGKAVKPMEQELGEALPEAEVAYIAMHLGAALAEPH 418 Query: 344 --HQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELV-AIREEIEPLLIIN 400 + + I+ + + +++ ++ S ++ + E +I+ Sbjct: 419 SASRQHVRVIVACQTGMGTSRMLAAGLKQAYDTIEIVDLVSALQVNREYVQHTEADFVIS 478 Query: 401 NSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSN--VRG 458 + +T + + + A S + + R Sbjct: 479 TVPIPWS-PLPVVVTTPLLDQRDKARIDQELVRQADCGPHHTPSVSTQKALPFLESLQRM 537 Query: 459 ESWQHITRQICAQLVAQHH----------------------ITADEAQRIIAREGEGENL 496 +++ + + + ++ RE EGE + Sbjct: 538 DAYNRAIQALLHHFFGKELHAEPSIRDVCQAASRAVASDTEAQEGIVAALLRRESEGEMV 597 Query: 497 I-VNRLAIPHCWSEQERRFRGFFITLAQPVEV---NNEVINH-VLIACAAADARHELKIF 551 + N + + H ++ R + L QP+ + E + +++ + L+ Sbjct: 598 LRGNAMILLHARTDLVPGPRFGILHLEQPMLYPERDGEAVRTAIVMLAPKESSCEALETI 657 Query: 552 SYLASILCQH-PAEIIAGLTGYEAFMELLH 580 +++ L + I + L Sbjct: 658 GAVSAALLERWGLIAILNEGNPHDIYQELE 687 >UniRef50_C5WEK4 Putative uncharacterized protein n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WEK4_STRDG Length = 649 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 100/645 (15%), Positives = 206/645 (31%), Gaps = 65/645 (10%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 +N RQ+ ++ LL + ++ LA V +TI D+ L L + G Sbjct: 1 MNHRQIGVLRLLLRSRDYQSGQVLADCFEVLVKTIYSDLLVLQEFLTPYDLVLKKVPRHG 60 Query: 59 YQLEIFE--RRSFFQLLQK------------HDNDDRLLALLLLNTFTPRAQLASALNLP 104 + + + S Q L D L +L LL L+ L + Sbjct: 61 VCILGPDSLKESLCQALDHQVQATDKDHSFWEREDVYLKSLFLLGHSLSILDLSLDLFVS 120 Query: 105 ETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAG-- 161 ET + L +L + C R ++ E R L+ K + Sbjct: 121 ETSIRRDLEKLDMQLADYNCQLIRHNGFVSLEGDELACRHFFRNRLIEKYAEQLNSHQSD 180 Query: 162 ------ITRDNLQHLSTACDNQHRWP--LMQGDYLSSLILAIYALRNQLTDEWPQ----- 208 ++N++ + A + Y LIL + + + Sbjct: 181 GLLAFFFDQENVEGIIKAVQEASDLYAYTISEQYRIYLILDLLIATRRYQQGYLLRPQPL 240 Query: 209 -------------YPGDEIKQIVEHSGLFLGDNAVR----TLTGLIEKQHQQAQVISADN 251 + GD + + L V+ T+ + + Sbjct: 241 PIGQDMALFGVYPFAGDLLSYSLNRPVDTLLPEEVKQLSLTILSVGYESFPSENQQFVQL 300 Query: 252 VQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 + L++RV ++ L++ D LV+ I+ +L + + +K + F Sbjct: 301 TKQLIKRVGQLSGLDLSHDTDLVKMISNYLRPMIYRLKNGINIANQTTEEIKKRYSILFH 360 Query: 311 MSLHFITLLREQLDIPL--FDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAI 368 + +L +Q + L + + +YF A+E+ + +I+ A + + ++ Sbjct: 361 VVWLASKVLSDQYQLELLDAEIAFLTIYFEIAVEKLEPPLTIVIVCPHGLAASELIISSL 420 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 R + + ++ LSEL + +LI + V I+++ Sbjct: 421 RRLISHYDHLVTVDLSELDSSVARQADILISSIQLKDFPRPYVLVSPVLTNDELDNIQKL 480 Query: 429 KHFLAT------AFIRQQPERFFSAPGSFH----YSNVRGESWQHITRQICAQLVAQHHI 478 L + + + + Y + S + R + +++ Sbjct: 481 YLDLTKGNRKVLSIVHDDYDAKQALLKDLIQHEVYLHQALTSQEDCLRFLAQHAFSENRD 540 Query: 479 TADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA 538 I+ RE G + +A+PH E R + +TL +PV + V++ Sbjct: 541 NPGYLTSILQREKMGSTSVYTGIALPHANPEMVGRSQLSLLTLKEPVIWGKNRVKVVMLI 600 Query: 539 CAAADARH-ELKIFSYLASILCQH-PAEIIAGLTGYEAFMELLHK 581 + +L S + + + +AF+ELL K Sbjct: 601 SIKEGEEELYKEALVHLYSKIDNEAFIDSLTQTADEKAFIELLLK 645 >UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2H7N3_ENTFC Length = 661 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 83/658 (12%), Positives = 195/658 (29%), Gaps = 78/658 (11%) Query: 1 MLNERQLKIVDLLEQQ---PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGS 56 ++ +++ ++ L T LA + +S RTI + + + Sbjct: 2 IMKQKEKLLLRYLIDHRKEYVTSQRLASELLLSDRTIRNYLQRIKELVEENGGKILAKPG 61 Query: 57 AGYQLEIFERRSFFQLLQ------------------KHDNDDRLLALLLLNTFTPRAQLA 98 GYQL I +R +F L + L LLL + LA Sbjct: 62 YGYQLHILQRLTFDLFLSRQEIVPGYAREPQGFYESEDRQKYILNQLLLEDAILFMDDLA 121 Query: 99 SALNLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDP--- 154 L + + + + + +K+R + + S+ G G +I+ E R + + + Sbjct: 122 EELYISRSSLTKDMQAIKERLIPYSLKIVSKHGQGIWIEGEERNRRHFIMDTFFGNHCGN 181 Query: 155 FLIPLAGITRDNL-----QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQY 209 L G +R + + D L D++ + AL + E + Sbjct: 182 SLKEYLGQSRFFTDISFEELVIIILDETREAKLKVSDFIIQNLSLHLALGIKRLREGFEI 241 Query: 210 PGDEIKQ-----------------IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNV 252 I+Q I + + + LT + + + + + Sbjct: 242 KELGIEQEVSDRVEYQVAQRIVQRIEVIADVSFPQEEIAYLTLHLMAKSNHRENKNDQEL 301 Query: 253 QGLLQRVPGIASLNII-----DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 + +V S D QL + HL + +K P Sbjct: 302 SKEVVKVLKRLSQEFRFSLIEDHQLFNGLLDHLSPMMIRLSRGIRIENPLTEEIKKENPK 361 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ--PIILLSDQNAIATI 363 F+ + + + + + + + L+ ALE+ + + +I+ + A + Sbjct: 362 VFEAVKTHFSNMPALKNYTINEDEWAYLALHLMAALEKERAAHKLHALIICATGYGSAQL 421 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 + + + ++ + LII++ + V + Sbjct: 422 LKNRVISEFGKNITVVNVKGYYEINETTLKGIDLIISSIDLSTMFFKIPVLHVSIFLNED 481 Query: 424 GIEQIKHFLATAF--------------IRQQPERFFSAPGSFHYSNVRGESWQHITRQIC 469 + +I+ + + +++ F + + + + Sbjct: 482 DVHKIRKVIGESIPYHSSDRPIPVFSLQQKKQIYTEQLSEKFFKTYTYEPKKEEVLHDLL 541 Query: 470 AQL---VAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVE 526 +L + +I ++I RE G+ + + +A+PH + + ++ Sbjct: 542 QKLSINEEEGYIRE-MRKQIQQRESMGQIIFSDTVAVPHPAVPVGIETKVAVALIPSGMQ 600 Query: 527 VNNEV-INHVLIACAAADARHELKIFSYLASILCQHPAEI--IAGLTGYEAFMELLHK 581 I+ V + + + + + L I +E F K Sbjct: 601 WYQYQGIHFVFLVSPSYIENEGITVVTKAIVRLVDQLNVQQEILAEPIFENFSSKFIK 658 >UniRef50_D1YCX5 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Propionibacterium acnes J139 RepID=D1YCX5_PROAC Length = 630 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 95/619 (15%), Positives = 193/619 (31%), Gaps = 63/619 (10%) Query: 15 QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFER----RSFF 70 P +LA GVS RT+ D+ +N I S + GY +E Sbjct: 19 DHPIKGTDLAGLLGVSTRTLRYDVARINGISRDN--IIESTTNGYSVEQSVYTGVVARNS 76 Query: 71 QLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPG 130 + + ++ +R+L LL T + L E+ + L RL+ ++E S G Sbjct: 77 EFSTQLEHHERILLYLLNTPDTTIYDVMRDCYLSESVIKASLKRLEPQFEEHSLHLSLRG 136 Query: 131 LGHFIDETEEKRVILLANLLRK-----------------DPFLIPLAGITRDNLQHLSTA 173 +D E L +L+ D L + + ++L+ Sbjct: 137 SSIHLDGNEIYFRNFLGSLVNTAMDAVVGQNDKVNRYLPDVRLGDIENVVVESLRDYYLE 196 Query: 174 CDNQHRWPLMQGDYL---------SSLILAIYALRNQ-----------LTDEWPQYPGDE 213 D+ ++ + + NQ L +P+ P Sbjct: 197 IDDIRLSNMVVNIAICVQRYRFPIEDNAAIDLMMSNQSEMLCDQLLVGLRKLYPERPLSS 256 Query: 214 IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLV 273 S + G E H V L L I +L Sbjct: 257 ADDAYLRSIV-----GATLGFGHGELDHHSDSCDIYSTVSRCLDDTVEHFGLVIAKEELY 311 Query: 274 ENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDL- 332 +I+ H+ R +A + R + +L++ P +D +++ L L I D ++ Sbjct: 312 GSISKHVGRLMAHAPSMPYFRNTLRESLRSRSPFLYDAAVYLADKLSRLLGIFFTDDEIG 371 Query: 333 -IGLYFACALERHQNER--QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAI 389 + +Y E N +++ A+ + + D R+ + +S + Sbjct: 372 LLAIYIGLYSEPAPNPNLVTAVVICPRYQALRDVLLAGLV-DHFADRMRVVDIVSSVAEA 430 Query: 390 REEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPG 449 ++I + + +++ + I L A ++ SA Sbjct: 431 DTCDGDIVISTTEEPSHRHTC---VPISALMSDLDLSAIDSVLLRASEKKSRIATASAMK 487 Query: 450 SF-----HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIP 504 F ++ +SW+ +C + + + + RE + A+P Sbjct: 488 RFLDPTLFFTGRSFDSWRETLDFMCGSMERNGIVPDAFRESVFLREEYPSTVFFRTFAVP 547 Query: 505 HCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA-RHELKIFSYLASILCQ-HP 562 H + + + P+ ++ VL+ ++ + L S+L Sbjct: 548 HAMDFLAYETKIAVLIPSTPINWETSDVSLVLLLAINEGDYDDFVRFYQPLISVLYDREL 607 Query: 563 AEIIAGLTGYEAFMELLHK 581 + ++ Y FM+ L K Sbjct: 608 FTELRSMSSYHEFMKFLDK 626 >UniRef50_B0NXI9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NXI9_9CLOT Length = 650 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 93/649 (14%), Positives = 226/649 (34%), Gaps = 72/649 (11%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 L RQ++++ LL +Q + ++ VS +TI DI YL + G Sbjct: 4 LIRRQIELLKLLSKQREYKPASFFSKSLDVSTKTIYTDITYLQSEVEKYKVDLVRAPRIG 63 Query: 59 YQLEIFERR--------------SFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLP 104 +LE + + ++ L +L+ ++ + Sbjct: 64 IRLEGEKENIQHMLRDLQKDNLSEDEKYTPEYRRLWILKKVLIDCEIITLESVSKEFLVS 123 Query: 105 ETWVAERLPRLKQRYERTCCLASRPGL-GHFIDETEEKRVILLANLLRKDPFLIPLAGIT 163 +T + + + + + E + G G I E + + N L + + T Sbjct: 124 KTSLYQDIAVINKSIESQSDVKLEVGECGICILGEESEIQNAVNNYLLSESKEEMFSDFT 183 Query: 164 R--------DNLQHLSTACDN--QHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE 213 D ++ +S N + ++ YL SL++ + ++L + E Sbjct: 184 HKLGNFFELDVIKAVSDLILNDFEELTEVLSEYYLKSLLVTLIMQSSRLLKKKHMNEETE 243 Query: 214 IKQ--------------IVEHSGLFLGDNAVRTLTGLIEKQHQQ---------AQVISAD 250 I I E L + +Q + + Sbjct: 244 ISYNNIRHMETYIVANSIAEQLKYQLHITYSNNDMEYLCRQLYAHRVTHHVKHMRTDYEE 303 Query: 251 NVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 V+ +++R+ I L++ D +L E++ HL + + ++N+K +P F Sbjct: 304 TVRDVIKRMSEIQKLDLTRDKKLYESLLYHLPPMILRLQNNIQIVNPMLDNIKQEYPELF 363 Query: 310 DMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLA 367 + +T + + + L + + LI L+F AL++ + +++ + + + + Sbjct: 364 TTMWYALTQIELRYQVTLTEDEVSLILLHFQVALDQFEQVGNIVVVCTYGVSSSQLILSR 423 Query: 368 IERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQ 427 +++ + I + +L I L+I + ++D +Y+ V ++T Sbjct: 424 VKQILPAKDNITVTNTKKLKEIDLSKVDLIISSVD---IEDPEISYVKVNPLLTKDDYAN 480 Query: 428 IKHFLATAFI-------------RQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVA 474 I + + P G F + +S + I L Sbjct: 481 ILDAYTKQVLLIKNNVCDNQKNGIKAPTLKKYLEGKFIFLKQDLDSKEKCLDFIIDVLEK 540 Query: 475 QHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINH 534 + + + + I RE G + +A+PH + ++ R +TL PV+ +++ Sbjct: 541 DNAVYDEFREAIYKREKLGVTCLDTGVALPHADPQTIKKSRIILLTLKHPVDWGGTLVSL 600 Query: 535 VLIACAAADARHELK-IFSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 +++ + ++++ + + L ++ + + +++ H+ Sbjct: 601 IVVTAFPEEEMNQIRDVINELYQLIGEKEDVNTFIRFETIQEVLKVFHE 649 >UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5DAC1_GEOSW Length = 709 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 98/707 (13%), Positives = 196/707 (27%), Gaps = 135/707 (19%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GSA 57 L++R I+ L + + EL ++ +S RT+ DI+ +N+ L + Sbjct: 3 LDKRSTAILCELLRCEDYLSMQELTKRFNISRRTVYYDIEKINYWLKSNNLDEVKYVRTL 62 Query: 58 GYQLEIFERRSFFQLLQ-----------KHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 G+ L + + + L+ K + LL+ + L+ + Sbjct: 63 GFYLTEQAKHAVREKLKNLESWHYQYTAKERQAWLAIYLLVKDQQLFLEDLSEKTRVSRN 122 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLR-------------- 151 E L +L+ + + L G+ I EE + + L Sbjct: 123 TTIEDLKKLRAQLKSFQLTLYFNRQTGYLIKGKEENKRKAIVYYLSLVIPNQQDWQTVLA 182 Query: 152 --KDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALR---------- 199 K L L L + + + +L ALR Sbjct: 183 NLKRLLLPDKDEQNMVILAELKCILNILNECEKDLNIQFADDVLHHLALRFWLFGKRIVQ 242 Query: 200 -------------NQLTDEW---------------PQYPGDEIKQIVEHSGLFLGDNAVR 231 Q T E+ P DE+ + H Sbjct: 243 GKKIEFDPIEKEVIQQTREFEAAKKASKKLESIFQTSIPDDEVYYLATHLLSTKVQYFGN 302 Query: 232 TLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVE-NITGHLLRCLAAPVWI 290 T+ G + VQ ++ A + + Q VE N+ HL + Sbjct: 303 TIQGHDDYGK------LKHIVQKMVTEFQAFACVTFPNRQEVEKNLLLHLKPAYYRIKYG 356 Query: 291 AEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH---- 344 + + +K + F ++ I + + D + LI L+F L R Sbjct: 357 LQVENPLVELIKTKYKDLFLITKKVIHHFETAIGKKVSDEETALIALHFGGWLRREGIQP 416 Query: 345 QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHY 404 + ++ I++ ++ + I + +E + S+ + + + Sbjct: 417 KERKRAILICANGIGTSAILRQQLEGLFSTVDFVETISVRDYEKRDFPDIDFAVSTVAVS 476 Query: 405 LLDDAVNNYITV---------------------------KNIITAAGIEQIKHFLATAFI 437 V + I+Q + Sbjct: 477 KKKHPVFVVNPILTDQEKETLLKKVHALFGENVSQNAKYSPEAILEIIKQYADIKDEQAL 536 Query: 438 RQQPERFFSAP-----------------GSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 + +F P + + ESW+H L+ IT Sbjct: 537 IAALKEYFYKPFIPKNRGRKPSLLELLLPEYIQIAEKVESWEHAIELASRPLLRTDKITE 596 Query: 481 DEAQRIIAR-EGEGENLIV-NRLAIPHCWS-EQERRFRGFFITLAQPVEVNNEV---INH 534 +I + G +I+ ++A+PH E ++ + L +PV + + + Sbjct: 597 QYVNAMINHIKNLGPYVIIAPKVALPHGKPDEGVKKIGMSLLVLKEPVSFSEKREHDVQL 656 Query: 535 VLIACAAADARHELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELLH 580 + + + D L S L+ L + E L Sbjct: 657 IFVLA-SVDQETHLHALSSLSECLASSEFIHTLIRCDTPEEIWSYLK 702 >UniRef50_C5ERF8 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERF8_9FIRM Length = 633 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 93/634 (14%), Positives = 203/634 (32%), Gaps = 61/634 (9%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 L +RQ + + LL + P T E+A +TGVS RT+ D+ LN L S AG Sbjct: 3 LMKRQKQYLHLLMDREGPVTSREMALETGVSLRTVKTDMAKLNELLKDYDMRIMSKPGAG 62 Query: 59 YQLEIFERRSFFQLLQ-----KHDNDDRLL------------ALLLLNTFTPRAQLASAL 101 Y+L + L +++ DR+ LL L+ + +L L Sbjct: 63 YRLASNDGEGLKPLSLLMEQMQYERSDRIPDTGPERVEYIAGKLLALDYYITMEELRQIL 122 Query: 102 NLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEK-RVILLANLLRKD--PFLI 157 + + + + + ++++ E + G + TE R + R + Sbjct: 123 YVSRSTLNQDMRQVRRLLELYGLKVVHASHKGIRLQGTETALRRCMAELFFRNEGKWEKT 182 Query: 158 PLAGITRDNLQHLSTACDNQHRWPLMQGDY--LSSLILAIYALRN--------------Q 201 P G + + + ++ + + L L IY Q Sbjct: 183 PGTGPGEERISQIQHILKSRADALCVSYPEAVVRELALQIYIAAQRCRFRKEVEFDSSLQ 242 Query: 202 LTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTL-----TGLIEKQHQQAQVISADNVQGLL 256 ++ ++ + E G+ + D + + +E++ ++ + Sbjct: 243 VSRQFMDMAVSIGDGLRETMGISMPDIEIHNMACMLQFRSLEEETGPEDDRFDGVIRRMF 302 Query: 257 QRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 QR+ L QL + HL R +N+ +P A D++ Sbjct: 303 QRIEEKFGLRFSGQEQLAHYLKLHLPRMAQRCRNRILIENPVLNDTFCNYPLAVDVANVA 362 Query: 316 ITLLREQLDIPL--FDSDLIGLYFACAL----ERHQNERQPIILLSDQNAIATINQLAIE 369 + +L ++LDI + + + +YF + ER + I++ A + + ++ Sbjct: 363 VQVLEQELDIKVNSNEFGYLAVYFNMCIVTYGERQN--KTLILVCPGSRAESVMYFTELQ 420 Query: 370 RDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 N ++ + EL +++ +++ + L V T NI+ I Sbjct: 421 ALFGNYVNTLLTCRVDELKSMKFTGNEVIVSTVPLHFLPGYVRWIHTGCNIV--ESFSDI 478 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 L + + F S + ++ + L + EA+ + Sbjct: 479 MEALTSLPLESFNIDEF-MDPSLWVTGAEADTPDTYFEYLFDTLCEMQMMDFGEARILYE 537 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 + N++A+ + +P + + ++ + + Sbjct: 538 NVERFGQELGNQVALIRAENPFLT-PFVHVTFTKEPFLWERQYVKVIIFMNVSDGSYEFR 596 Query: 549 KIFSYLASIL--CQHPAEIIAGLTGYEAFMELLH 580 + E + FME + Sbjct: 597 NGIYSFLGKWYRHKDKIEESIRCPDFGRFMEGIK 630 >UniRef50_B9DVZ2 Transcription antiterminator n=4 Tax=Streptococcus RepID=B9DVZ2_STRU0 Length = 623 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 81/625 (12%), Positives = 199/625 (31%), Gaps = 53/625 (8%) Query: 2 LNERQLKIVD-LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L R I++ L+ Q + L Q +S +T+ + I+ LN L + + Sbjct: 3 LVNRWYDILENLVIQNQMSFDTLKQNLKISSQTLNKSIEQLNAVL-DGDVEIIQKNNQLE 61 Query: 61 LEIFERRSFFQLLQKHDND------------DRLLALLLLNTFTPRAQLASALNLPETWV 108 L +++ +L L LL ++ T LA + + + + Sbjct: 62 LAVYDYARLETILAGSLRKTSDFNSASKRVAYLLKRLLESSSSTFIDDLAEEIGVSRSTI 121 Query: 109 AERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 + L K E + P G + E + +L + + + L + L Sbjct: 122 NKDLRTAKLVAEYYHVSIKGIPNRGVQLLGHELQLRLLFIHEVNNYFEIDTLKEESYLFL 181 Query: 168 QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGD 227 + L + + ++ I I + L + P Y + ++ + Sbjct: 182 EQLYQTYRLPLKIQELLTKSIAISIKRIQT-NHHLLESIPFYSNEVNSDAFMEELVYHLE 240 Query: 228 NAVRTLTGLIEKQHQQAQVISA-----------------DNVQGLLQRVPGIASLNIIDA 270 A R E+ + + + Q ++Q V +N Sbjct: 241 IAYRISLSQFERDFISFALNTQYIDSLSYQEGGVSQKLLNLYQEMVQEVKDSLLINFDQE 300 Query: 271 QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL--DIPLF 328 +L + HL + ++ + +K +P AF+M+ +L + I L Sbjct: 301 KLFVEMHTHLKFLVNRLIFHIQANDLFHGEIKQKYPLAFEMATVAGKVLEKNFATRIELS 360 Query: 329 DSDLIGLYFACALERHQNE------RQPIILLSDQNAIATINQLAIERDVLNCRVIIARS 382 + + LYF + +++ ++ ++ + A + + + + ++I++ Sbjct: 361 ECSYLALYFELIMREKEDQIVQTKMKKIAVVCTTGRGTANMICRRLAKVLGP-DIVISQF 419 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE 442 E ++ I + + + N+ ++ + R+Q Sbjct: 420 SEEQFNPEKDDNYFAIFTTVPLKFGQLKSPLVQITNLFNDQWLQNEWQKVQHIHQRRQKS 479 Query: 443 RFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLA 502 +++ ++ LV + + +RI+ RE + L N++A Sbjct: 480 NTVR-----FIRLEEESTYETYLIKMATALVDEGLVDLAFPERILQREEKQSTLFGNQIA 534 Query: 503 IPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD-----ARHELKIFSYLASI 557 PH + ++ L + ++ + + + L+++ + I Sbjct: 535 FPHTLNLLDQNPVLMVGILEKLFVAGSQEVALIFMVAIPKSVEEDTETELLEVYDDIFRI 594 Query: 558 LCQHPA-EIIAGLTGYEAFMELLHK 581 + L E F + + + Sbjct: 595 SSDKCLWNELQLLKSQEEFNQFIAE 619 >UniRef50_A6VLW1 Transcriptional antiterminator, BglG n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VLW1_ACTSZ Length = 608 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 86/601 (14%), Positives = 196/601 (32%), Gaps = 50/601 (8%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYL-NFTLNGKARIFASGSAG 58 L++RQ K+ LL+ Q T ++AQ GVS R++ D+ L +F L + S G Sbjct: 3 LSKRQTKLFQLLDHQADYCTINQIAQHLGVSKRSVHYDLAKLHDFFLQQGKELKTKPSVG 62 Query: 59 YQLEIFERRS--------FFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 ++ +++ +L + L LL + +LA + ++ + Sbjct: 63 VKIVTTAKKNEHKANNFTSSRLTVDARRVEILAQLLFEERIVTQTELAERYFVSKSSIQN 122 Query: 111 RLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLR----KDPFLIPLAGITRDN 166 L + Q++ G +I TE L + L A Sbjct: 123 DLRSINQQFIE----LKTDHDGTYIATTEVNWQKALFKFNQYISSSYAELSDKARALNTY 178 Query: 167 LQHLST------ACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPG--------- 211 + + D+ I+ I + + +P Sbjct: 179 YPQEIIDFVNKLISRYILKTGIKLSDFYIQNIMHILIILVYRIQKGNHFPERSNNDALPN 238 Query: 212 --------DEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIA 263 + + + + + + V L+ V + Sbjct: 239 IALEKMINNIESEFSIRFNQGDMHFLRHHFFLNRLDEINENAINCENIVHQLIAEVEHLT 298 Query: 264 SLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 ++ D QL + + H+ ++ + +K+ ++++ L + + Q Sbjct: 299 NIPFTTDEQLYKQLLLHVPSMISRLQDVNYMENPYTQEIKSELSRSYNILLIAVQKIETQ 358 Query: 323 LDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIA 380 I + + + LYF A ER + R+ +++ A + + I+R V ++ + Sbjct: 359 FHIKFNEDEVIFLSLYFQVAQERLRKNRKILVVCPMGTAASELVINRIKRFVAGQDILES 418 Query: 381 RSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ 440 SL+EL + L++ L D + + I I+ + + +Q Sbjct: 419 ASLTELQHLDLTQFDLILST---VELADIKQKWFKISLFINEKDIKMLLNIERDENNYRQ 475 Query: 441 PERFFSAPGSFHY-SNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVN 499 ++ + + + L ++ + Q ++ RE + Sbjct: 476 ISSNAVFSSDIYHEIQGNYSDKVTLLQDVIDGLTVKNRVKNGYLQSVLEREKLSPTDLPM 535 Query: 500 RLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA-CAAADARHELKIFSYLASIL 558 +AIPH S+ + + + ++ +N ++ + + A D I S + S++ Sbjct: 536 GIAIPHGISDLVNKTTVVIVKNKRKIKWDNYTVDIIFMINIAPQDRYQTKNIISEIYSVI 595 Query: 559 C 559 Sbjct: 596 D 596 >UniRef50_C8NIY4 Putative uncharacterized protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NIY4_9LACT Length = 635 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 88/624 (14%), Positives = 203/624 (32%), Gaps = 66/624 (10%) Query: 14 EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLL 73 Q+ ELA GVS RT+ DI+++N I A+ GY L F++ + L Sbjct: 19 RQEWMKGRELATCLGVSTRTVRLDIEHINQ--EAPHIIQANRQKGYHLVAFQQNRYITAL 76 Query: 74 Q--------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCL 125 + + L LL + R++Q+ + L Sbjct: 77 NPTKTPQDNEERSVHLLKQLLFKEDGVFIDHFCEQCFVSAKTFELVRIRVQQKLQEYEGL 136 Query: 126 ASRPGLGH-FIDETEEKRVILLANLLRKDP-----------------FLIPLAGITRDNL 167 + + G ++ +E + L NLL+K+ + + I D L Sbjct: 137 SLQLNNGFLQLEGSETSKRKLYRNLLKKEVGEDFLNSSELMQVYPELDMEHIQSIIWDKL 196 Query: 168 QHLSTACDNQ-------------------HRWPLMQGDYLSSLILAIYALRNQLTD--EW 206 +H + H D L L + +R+ + E Sbjct: 197 KHNRYSIRKSLMPFLLLHMGIVLQRIKVGHTVQEFSQDEL-DLEVEYQIVRSIFSKILEE 255 Query: 207 PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLN 266 P E+ + + +AV + + + V+ + +++ I ++ Sbjct: 256 TIIPEAEVVSFAKLLKAYHNSDAVESKISFRGEIVDLE-----EVVRQIGEQLYSIMGVS 310 Query: 267 IIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 I+ + HL L + K +P FD ++ L Sbjct: 311 FIEQEDFTMRFQLHLQGFLERVQLNLSLPNVYVQTFKRQYPLVFDTAVSISQYLMSVFQC 370 Query: 326 PLFDSD--LIGLYFAC-ALERHQNER-QPIILLSDQNAIATINQLAIERDVLNCRVIIAR 381 + + + I L+ ++R + ++ + I++ + Q + + ++ + + Sbjct: 371 EMTEEEIGFIALHIGAAYMQRVKPQKLRAILIANTQYPLIAGSVSRLKDQFSHRLDFVVE 430 Query: 382 SLSELVAIREEIEPLLIINNSHYLLDDAVNNY---ITVKNIITAAGIEQIKHFLATAFIR 438 + + E + L+I + + I+ + Sbjct: 431 QSTFTTDLSEFYDADLLITFDQIEHPLEIPTVRLGLFFNTQDEIQLIKVMNTLETEQMSH 490 Query: 439 Q-QPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI 497 + + + F Y+N++ + + ++ L+ ++ +T + ++ RE Sbjct: 491 KIRSQIPDFMSEKFFYANIQPNNRDELLHEMGHHLIQENIVTKEFLNSVLERENLSSTDF 550 Query: 498 VNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASI 557 LAIPH + +R L +P++ N+ + V++ + +++F Sbjct: 551 DYALAIPHPLRPESKRSMISIAVLKEPIQWNHFPVKLVILLALKEEDMEFMQLFLGWLGK 610 Query: 558 LCQHPAEI--IAGLTGYEAFMELL 579 P ++ + E+F+E + Sbjct: 611 QLDSPEKMMSLLEAKNVESFIEAI 634 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 103/678 (15%), Positives = 237/678 (34%), Gaps = 101/678 (14%) Query: 2 LNERQLKIV-DLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L RQL+I+ +L ++ ++ VS RT+ R+I +N + + + G Sbjct: 4 LRGRQLQILRKILSSSNTRMEDIMKEFDVSKRTVYREIASINEFVKNYNSKIVNKTDGLV 63 Query: 61 LE--IFERRSFF--------QLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 +E + + + + L LL LN + + + ++ Sbjct: 64 IEGNVADIEKLKLDIVGYPSEFETEERRKMILSELLQLNEPVKLEYFSKKFGVTTSTISY 123 Query: 111 RLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQH 169 L L++ E+ L ++PG G +I +E +AN L ++ L + Sbjct: 124 DLKELEKWIEKQGLTLITKPGYGVYISGSENSFRKAIANFLYENFDTADLIDFLKTGYLA 183 Query: 170 LSTACDNQHRWPLMQGDY--LSSLILAIYALRNQLTDEWPQ------------------- 208 + N L DY + + AI L++Q+ E + Sbjct: 184 KNNIEKNIDLRLLNLIDYDTVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIKRLQN 243 Query: 209 ---------------------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI 247 + K + E + + ++ + +T + ++ Sbjct: 244 GETIEMGEDNLQELKKTNEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAKYRSTTQ 303 Query: 248 SAD------NVQGLLQRVPGIASLNIIDAQLVE-NITGHLLRCLAAPVWIAEHRQSSMNN 300 + + + +++ I ++ + + +E + HL+ + + R + + Sbjct: 304 NYNDKDIEIIARDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIRNPLLED 363 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ---NERQPIILLS 355 +K +P F+ S +LR++L++ + + + I ++F ALER + + +++ + Sbjct: 364 IKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYIAMHFGAALERKKEAAKKYNIMVVCA 423 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 + + + + ++ S +L ++ + LI++ LD + Sbjct: 424 SGIGTSRMLMSKL-QMFPQINIVDVTSSIKLKDLKGRDDIDLIVSTI--PLDIKDKKVVV 480 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERF--------------------FSAPGSFHYSN 455 V ++ +E++K L T FI + + S Y Sbjct: 481 VNPLLLKEDVEKLKKALNTDFIMEYGIKKEEEENYEKEAFHIANYGKRILELCDSITYMT 540 Query: 456 VRGESWQHITRQICAQLVAQHHITADEAQRI----IAREGEGENLIVN-RLAIPHCWSEQ 510 V GE I I L+ ++ I+ ++ ++I + RE G+ ++ N I HC E Sbjct: 541 VTGEKSTQIIEYILKNLIDKNLISENQKEQIKERLLKRESLGKIVLPNKGFVIYHCTIEN 600 Query: 511 ERRFRGFFITLAQPVEVNN-----EVINHVLIACAAADARHELKIFSYLASILC--QHPA 563 + + V++ N E I + A R +++ L+ L + Sbjct: 601 IDFPLVVVGKVIEEVKMKNLVGDYEKIRTAFLMVAPEGDREGIEVLGDLSMSLIEREDLV 660 Query: 564 EIIAGLTGYEAFMELLHK 581 + + E + + Sbjct: 661 NTLNEAQSQKEVKEKIKE 678 >UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax=Streptococcus RepID=A8AYJ7_STRGC Length = 662 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 90/667 (13%), Positives = 204/667 (30%), Gaps = 94/667 (14%) Query: 2 LNERQLKIVDLLEQ---QPRTPGELAQQTGVSGRTILRDIDYLNFT--LNGKARIFASGS 56 +++++ I+ L Q T ELA S RT+ + L +I A Sbjct: 1 MHQKEKMILQYLMDNADQYITSMELATHLTCSDRTVRNYLKSLVGMPTSQTGWKIIAKQG 60 Query: 57 AGYQLEIFERRSFFQLLQKH---------------DNDDRLLALLLLNTFTPRAQLASAL 101 GY+ I + + + LQK + L LL LA L Sbjct: 61 HGYRFIIDNKDVYQKFLQKEVLGEASTEAIEGIDDRYNYILNKLLFEQESIYFDDLADEL 120 Query: 102 NLPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + + ++ +++Q + + S+P G ++ E + D F L Sbjct: 121 YVSRSTLSSDFKKIRQDLSKYDLEIESKPKRGVYVTGDERNIRRFIIEFFFHDKFFQILH 180 Query: 161 GITR-------DNLQHLSTACDNQHRWPLM------------------------------ 183 + +L+ L+ ++ R + Sbjct: 181 NYIKLEVSGRPISLEELTIIVLDECREGQLKLSDFVIQNLVIHIALSLKRIGEGFQIKQL 240 Query: 184 ----QGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEK 239 +Y +A L+ ++P +E+ I H L + Sbjct: 241 DSWSMDEYREEGKIAEKILKRVYHSTGLKFPKEEVDYITLHLVSK------GNLQTNKCE 294 Query: 240 QHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMN 299 + AQ I + L Q D QL+E + HL + + Sbjct: 295 KEDVAQQIRKQLLFVLEQSNFTHEYPFKNDFQLIEGLVAHLSTLFVRLKNHVKMDNPLLA 354 Query: 300 NLKAAWPAAFDMSLHFIT--LLREQLDIPLFDSDLIGLYFACALERHQNERQ--PIILLS 355 ++ + +M+ + ++ + + + + L+F +LER + +++ +++ + Sbjct: 355 EIQNHYAGVLEMTGNILSAMPIFANEKLSADEVAYVALHFMTSLERLKEKQKFNILVICA 414 Query: 356 DQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIE-PLLIINNSHYLLDDAVNNYI 414 A + + I+ ++ N V I + E ++ II++ Sbjct: 415 TGYGSAQMIKHRIDNELGNL-VRIVDVIGYYEINDERLKNIDFIISSIDLSNLVFNIPVF 473 Query: 415 TVKNIITAAGIEQIKHF------LATAFIRQQPERFFSAPGSFH--------YSNVRGES 460 TV + + I +I+H + + Q+ S ++ + + Sbjct: 474 TVSIFLNSDEIREIRHKISLLKPIKNYKLDQETNVVESDQERIFDAYFSPECFAVLNEVN 533 Query: 461 WQHITRQICAQLV--AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFF 518 + + ++ I RE + + +A+PH + + Sbjct: 534 KDQVIDSLLQRMSQGEDEQFVPKMKDLIEQREEMSSIVFSDTVAVPHPIKAYAKGHKIGV 593 Query: 519 ITLAQPVEVNNE--VINHVLIACAAA-DARHELKIFSYLA-SILCQHPAEIIAGLTGYEA 574 + + V + E I V + + + S + + + E + + Sbjct: 594 ALVPEGVVWSPEYPKIKLVFLPSPSVFGNEDLSNLTSKIILLLEQEELQEQMINCQTFTD 653 Query: 575 FMELLHK 581 F +L + Sbjct: 654 FKKLFLR 660 >UniRef50_Q65NB6 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65NB6_BACLD Length = 683 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 85/680 (12%), Positives = 198/680 (29%), Gaps = 99/680 (14%) Query: 1 MLN-ERQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M+N +R +++ L + + T +L +S R I D+D +N L GK Sbjct: 1 MINEKRPAQLLQYLLRVREATMHQLIDHFQLSKRQICYDLDKINHWLTGKQLPEIEYKRK 60 Query: 59 YQLEI-------------FERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPE 105 +L + + F Q+ + L + A L L + + Sbjct: 61 NRLAVPETLLELRFSEACSDIGRSFIFTQEERIKALYMFLFVRREPISSAHLTQLLQVSK 120 Query: 106 TWVAERLPRLKQRYERTC-CLASRPGLGHFIDETEEKRVILLANLLRKD----------P 154 V + + + + G+ + +E + + + + L Sbjct: 121 NTVMNDVKKANEALTPFLVAIKYTRQRGYHLIGSEFDKRVPVMHHLSSFLQKPYGKEILH 180 Query: 155 FLIPLAGITRDNLQHLSTACDNQHR------WPLMQGDYLSSLILAIYALRNQLTDEWPQ 208 +++ ++G Q A + + +++ L++ + + Q Sbjct: 181 YILKISGSRDHKQQEFKRAVELVSKEYGLQLVEERLNEFIYFLMMYSIRVAEGKIVRFHQ 240 Query: 209 YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI------------SADNVQGLL 256 G+ +KQ + N +R E + Q++ + L+ Sbjct: 241 EEGELLKQSPLKNAAVRLVNELRIPVHETELCYILIQLLGLSFGQQPAHDPLYQLCEKLV 300 Query: 257 QRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 A + ++ E++ HL + ++ +K F + Sbjct: 301 FEFESRACITFPRRREVAESLYRHLKPAYFRMKYRIPIHNPLLSKIKKEHKELFTIVQKL 360 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERH----QNERQPIILLSDQNAIATINQLAIE 369 + L L+ P+ + + I ++F LE+ +++ +++ + + + + +E Sbjct: 361 MRHLEALLNKPVPEEEIGFITIHFGALLEQPVQSGSSKKTAVVVCPSGVSSSLMVRRQLE 420 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIIN---------NSHYLLDDAVNNYITVKNII 420 V A SL E + + L V + Sbjct: 421 SLFSEIVVEKAMSLQEFTPDVFDHYDAVFSTVELKTKKRYYMVRPLMTPAEKSRLVNEVY 480 Query: 421 TAAGIEQIKHFLATAFIR--------------------------------QQPERFFSAP 448 + + L F+ ++P Sbjct: 481 QEMFGVKQRELLTDEFLHILKKHASIIDEKGLRESLKNIAFVQKVTETRGKRPVLKDLLT 540 Query: 449 GSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG--ENLIVNRLAIPHC 506 + + W+ + L+ + I + +I +I +AIPH Sbjct: 541 DETIQMADQIKGWEEAIQTAAKPLLDKEVILKEYTDAMIDNVKTMGPYMIIGPEIAIPHA 600 Query: 507 WSE-QERRFRGFFITLAQPVEVNNE---VINHVLIACAAADARHELKIFSYLASILCQHP 562 E ++ + L +PV ++ + + A D LK S L +L Sbjct: 601 RPEKGVQKVGMSLLKLKEPVYFLDDEQYPVRLLFCIAA-VDHTTHLKALSQLTRLLSNKE 659 Query: 563 AEIIAGLTGYEAFMELLHKG 582 + T ++ L + Sbjct: 660 NQDSLKETESLEHIKRLIEA 679 >UniRef50_Q5WKW9 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKW9_BACSK Length = 608 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 107/638 (16%), Positives = 222/638 (34%), Gaps = 90/638 (14%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 + +R +++ LL+++ + EL +Q GVS RTI DI LN A I ++ G Sbjct: 1 MKKRHARLLQLLKEKEGRFLSGRELGEQLGVSDRTIRNDIRILNEDYLINAEIVSNNRLG 60 Query: 59 YQL----EIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 Y+L F +RS L + LL N + + A + + + R Sbjct: 61 YKLRGTLTQFNKRSPLDLDYHKRAFQLVKELLDANGWMSYDKFAETHFVSPQTIHSDVMR 120 Query: 115 LKQRYERTCC---LASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLS 171 + + ++ ++P G + E+ + +LL +L + ++ + ++ Sbjct: 121 MSEWLKQYDRKAMFETKPFCGIRLLGNEQDKRMLLTSLFNNE------FAAKQEAISQMT 174 Query: 172 TAC------DNQHRWPLMQGDYLSSLILAIYA---------------------------- 197 TA + D L + + + A Sbjct: 175 TAFSGWHTPQSIADIGKKLSDVLDANSIYVSASVWAKLLAVVLVAVHRGKTHELSTNKSA 234 Query: 198 -------LRNQLTDEW--PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS 248 L Q+ + P P E+ + + F + ++ Q A + Sbjct: 235 QAGANWKLAEQIANAIGWPCCPDGELAYLASNCIAFKLLPIQKNGNTAASERLQAACLAG 294 Query: 249 ADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 L + +++I D +L+ ++T HL L+ E S++ +KA + Sbjct: 295 -------LSLLEKQYGVDLIGDQKLLRHLTLHLQNMLSVLQDQYEIEAPSLSMIKAQYIH 347 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSD-QNAIATIN 364 AF M++ F L E+L I + +++ + L+ A++R + + + L+S A+ T+ Sbjct: 348 AFQMAVVFAEELGEKLSISVPEAEVSYLALHLQAAIDRMERKPIRVPLISTKSLAMTTLM 407 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAG 424 + +E+ + A+ + +L + + + IT Sbjct: 408 KQKVEQAYPQVSIQEIYIPYAPSAVPRDAAFVLTTSKELKTQHKTLYIE---GDFITKED 464 Query: 425 IEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQ 484 I +IK + + F N G++ + + R + + A Sbjct: 465 IARIKE-----CLTYGILQARVTEDCFFRLN--GQTKEELLRLLVKKAGA-----EVYLP 512 Query: 485 RIIAREGEGENLIVNRLAIPHC-WSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD 543 I +RE I NR+A+PH S + F ++ V+ + V + + Sbjct: 513 SIESREQLSATDIGNRMAVPHPLISIDAPETKIFVGMNSRAVQWGERTVQMVFLLLVSER 572 Query: 544 ARHELK-IFSYLASILCQHPAEIIAGLTGYEAFMELLH 580 + IF + + + + Y+ F L Sbjct: 573 DTVLYESIFREIYQL---SKTARLQDMKSYQGFRNSLS 607 >UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDU8_BACSK Length = 688 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 105/692 (15%), Positives = 207/692 (29%), Gaps = 121/692 (17%) Query: 2 LNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYL-------NFTLNGKARIF 52 + R+ ++ L +Q T ELA VS RTI RD+ L +L+ + Sbjct: 3 MTARERVLLQALLANEQGLTLQELADVASVSVRTIQRDLPSLAKVAANHQLSLHRGHFLV 62 Query: 53 ASGSAGYQLEIFER---RSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 G++ Y+L + E+ + L LL N LA LN+ V Sbjct: 63 LEGASTYKLALKEKLQTINAGDFTSDERVGLLLALLLDANEPVKLFALAKELNVTPATVG 122 Query: 110 ERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPF------------- 155 L + + E+ L + G G + TE ++ +L ++ Sbjct: 123 SDLTKAAEWLEQFGIKLIRKRGYGIAVKGTETNIRQAMSAILSENLTEEAFYEAVYAGQM 182 Query: 156 -------LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW-- 206 L+ + L + + + M +L++ ++ Sbjct: 183 QNEVASRLLHFVDLETIRLVQSTIQRVKEKHFDDMADQSFIALVVHATLAIERIKQGEQI 242 Query: 207 -------------------------------PQYPGDEIKQIVEHSGLFLGDNAVRTLTG 235 P EI +V H + Sbjct: 243 RMDAGQLEALHKEDSLPVAQELAEALAQTFQITIPEAEIGYLVMHL-------RGARIGH 295 Query: 236 LIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQ 295 + + +Q+ A ++ + + S+++ + L + + HL L + Sbjct: 296 IQGEPFEQSNAELAGRLKQFIAGMEQDLSVSLAEPSLFQGLLAHLKPALYRVRQGMKIHN 355 Query: 296 SSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNER--QPIIL 353 + +KA + A F ++ + L +P + + L+F ALER + +++ Sbjct: 356 PLLEKVKADYAALFAVTAKQASKAFAPLKLPEAEIGFLTLHFGAALERRKRSVSLSALVV 415 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNY 413 S A + I ++ I SL +L L I + Sbjct: 416 CSSGIGSAKMLASRIRQEFPEISSITNASLFDLDKYDPANFDLFISTVKVETNN---RQA 472 Query: 414 ITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHI--------- 464 + V ++TA IK + Q + + + + Sbjct: 473 LRVSPMLTADEASLIKANIDELLNEQTITAAPTIRTNVEEKRSFADIKRMASFIDSFLQS 532 Query: 465 ------------TRQICAQLVAQHHITAD--EAQRIIAREGEGENLI-VNRLAIPHCWSE 509 R C L + ++ ++ARE G I LA+ H Sbjct: 533 VRLVAVDELLAGIRVYCDILEEEGALSEAKQVYDALLARERLGGIGIPGTGLALFHTRLN 592 Query: 510 QERRFRGFFITLAQPVEV------NNEVINHVLIACAAADARHELKIFSYLASILC---- 559 + +R F+ L +V N + +L+ A A EL S+++ +L Sbjct: 593 EIKRPVFVFLDLKTEAQVASMADGNERIKRAILMLAPEALAEQELAFMSFVSILLIGSDD 652 Query: 560 ---------QHPAEIIAGLTGYEAFMELLHKG 582 + E + +++G Sbjct: 653 ETALFYQGREREITQFLEQKCREFMISYINEG 684 >UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2S2_9FIRM Length = 632 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 100/634 (15%), Positives = 217/634 (34%), Gaps = 56/634 (8%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSA 57 M + +L ++ L +P + LA VS +T+L+ I+ L L I + Sbjct: 1 MYEKDRLVLLQKLMASSEPLSSSALAFMLNVSVKTLLKYINQLKDELMENGADILIKRGS 60 Query: 58 GYQLEIFERRSFFQLLQ-------------KHDNDDRLLALLLLNTFTPRAQLASALNLP 104 G L +++ F +Q ++ L L+ N + LA + + Sbjct: 61 GSVLIVYDPDKFNHYVQSLSVGEGDGVGSPENRKKYLLARLITENEYLNLYDLADEIYIS 120 Query: 105 ETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRV--------------ILLANL 149 + + + L LK ER L G+ I E+ L Sbjct: 121 PSSLRKDLKELKPTLERYHLTLQHSHSSGYRITGKEKDIRRCLSKEASISGIIDFLPQET 180 Query: 150 LRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDE---- 205 + K L + + ++L + + + L ++ + L NQ E Sbjct: 181 MYKSSQLSLIQHVIAESLMNANISITADSCSALSLHILIAINRVETNNLINQEVSEAMRQ 240 Query: 206 --------WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN----VQ 253 +EI + I H+ + Sbjct: 241 SLEYKTAIDINRSIEEIFHVSLPEAELCYFAFHINGKKKINADHESLSEDLPQDAVIFYN 300 Query: 254 GLLQRVPGIASLN-IIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 L+ + ++ ++ D L N+ H++ L + QS++++++ +P A +++ Sbjct: 301 LFLRNILKLSKIDLFEDKDLRANLLTHIVPFLHRLDNNMQVTQSNLSSIRDEFPFANELA 360 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIER 370 + ++ + + I + + + L+ A ALER R + + N I+++ +L R Sbjct: 361 VCGLSFIPRKYGIAVSEEEIMYFTLHIALALERGPEARVKVNIAVISNDISSLFKLIAYR 420 Query: 371 DVLNC-RVIIARSLSELVAIR-EEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQI 428 I L + ++ EE++ +I N+ + + ++ ++ + + Sbjct: 421 LNKTLADFINLIKLFDAKSLDAEELKKFDVILNATEVNLRFDKPTLKIQPSLSENDLHIL 480 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 + L + ++ Y + S Q + + + AD + A Sbjct: 481 RLMLNNLNEKFHLDKLIRPEL---YLEISASSRQEALMKQIEHIQKSLPLPADFYDSVAA 537 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE G N++AIPH + ++ L +PV N + + + + C + Sbjct: 538 RERMGTTEYNNKIAIPHPLNPEQLPNFISICKLKKPVTWNAKPVQIIFLVCINENQALTR 597 Query: 549 KIFSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 F ++ I+ H A + Y+ FM + Sbjct: 598 IFFDKISKIIQNSHLAFELLETRNYDEFMAKFSQ 631 >UniRef50_D2EIS8 Predicted protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIS8_PEDAC Length = 639 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 92/639 (14%), Positives = 208/639 (32%), Gaps = 66/639 (10%) Query: 2 LNERQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-GY 59 +++R+ +IV+ L ++A+ T +S R+I +D + G Sbjct: 1 MHDREAEIVEFLIHHGVVHYEQIAKATKLSKRSIANYLDIIENDAQPFNLKLTRKPNVGI 60 Query: 60 QL--EIFERRSFFQLLQ--------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 L ++ ++ F L+ + L LL + +LA L + + + Sbjct: 61 YLNGQLRNKQDFLAALKLHSGFTSKEARIRYLLTKLLDADRSYTLNELADDLYVSRSTLE 120 Query: 110 ERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQH 169 ++++ + R G I + E+R L+A +L+ + +D Sbjct: 121 SDFKQIREFFNEHHVKIKRGANGIAIRASGEQRERLMAKILKTYWG--QNISVIQDANGQ 178 Query: 170 LSTACDNQHRWPLMQGDYL--------------SSLILAIYALRNQLTDEWPQYPGDEIK 215 +++ L S L L Y L L D++ Sbjct: 179 IASTLKLPDYLLNFFPADLVQAVLAGITDFMVTSRLELTDYDL-QSLAIHLIINTDDKVT 237 Query: 216 QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRV---------------- 259 VE G L + L + +++ V L+ + Sbjct: 238 NDVESLGPDLIPETSQLLNAIKKQRTINFSATGLQRVNRYLEVIVARQKNSYQASDVAQT 297 Query: 260 -PGIASLNII-------DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDM 311 + D L+ ++ HL + + +K P AFD+ Sbjct: 298 EKQYYQFLLDKLAELEPDEVLLRDLAIHLATAVDRLKKGIVIDNPYTDEIKMNLPIAFDV 357 Query: 312 SLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE--RQPIILLSDQNAIATINQLA 367 ++ + Q + L D++ + L+F ER + +++ S + + Sbjct: 358 AIQLGEAIETQYPVQLHDAELGYLALHFEAFFERCHLHAPIETVVVSSAGVGASQLLAQR 417 Query: 368 IERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQ 427 +E N + + R L ++ + ++++ + I V ++ I+Q Sbjct: 418 LEERFNN-SLKVTRILDLATVMKTNLSEKMVVSTI--PIYGLKQPVILVSPLLPPEDIQQ 474 Query: 428 IKHFLATAFIRQQPERFFSA-PGSFHYSNVRGESWQHITRQICAQLVAQHHI--TADEAQ 484 I H + + FF+ + +S+ + +I L Q+ + + Sbjct: 475 INHAIISLTKNNHSNSFFNLLDPQLIQIDSVKKSYVTVLEEIVGSLTKQNILVNNPKILE 534 Query: 485 RIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADA 544 ++ RE + N +AIPH ++ + Q V+ + V+ + Sbjct: 535 MLVEREKMSSTAL-NAVAIPHIAPNYVQKSAIALWLVPQGVQWLGNTVYVVIFLALTREQ 593 Query: 545 RHELKIFSYLASILCQHPA--EIIAGLTGYEAFMELLHK 581 + + + + ++ A + +A + ME + K Sbjct: 594 VAASREVYQILNRMVENTAFCQQLAQVATASEAMEHIQK 632 >UniRef50_C7WZJ5 Predicted protein n=7 Tax=Enterococcus RepID=C7WZJ5_ENTFA Length = 650 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 72/648 (11%), Positives = 192/648 (29%), Gaps = 70/648 (10%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA------ 53 +NERQ+K+ LL + +++ VS +T+ +D++ L + + Sbjct: 4 MNERQIKLARLLIEHDKFLPASFYSKKLSVSTKTVFQDLETLRLFIQPYSVEIERLPSLG 63 Query: 54 -------SGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 S + + E+ S QL + + ++ LA + +T Sbjct: 64 IHLSGEHSAKSNFLKELESELSQDQLSPVNRRVKIIQSVFFEEDNPTLESLAEQYLVSKT 123 Query: 107 WVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIP-------L 159 + L + + G E + + + L+ LI L Sbjct: 124 SLYNDLKIINEIIVSNGIEIISNNDGLTSQGAENEIQLAIKQLVTHFSNLIEEKSVNAKL 183 Query: 160 AGITRDNLQHL--STACDNQHRWPLMQGDYLSSLILAIYALRNQLT--------DEWPQY 209 L + N DY +L ++ + ++ + Sbjct: 184 YHFFEKQLVDIVSKILHKNFRELTENVSDYYMESLLTTLLVQCRRIQMGYHVEGEDDYLF 243 Query: 210 PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQA----------------QVISADNVQ 253 + + + T+ E D V Sbjct: 244 SSIRYMETFVVANDMSERLSQETVLNFSEADKDYLSRQLFAHRVTTEVKASDEKYVDLVY 303 Query: 254 GLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 L+ R+ I +++ D L ++ H+ + + N++ + F + Sbjct: 304 RLISRMSKIEKIDLTQDEHLFNSLLYHIPAMILRLKRGIHIENPLLENIRDQYSELFSIV 363 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIER 370 + + ++ +Q ++ L D + I ++F AL+R +I+ + A + + Sbjct: 364 WYALVIVEQQYNVILNDDEISFILIHFQIALDRQSKASNIVIICQYGMSSAQFIYSKVRK 423 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 + + +L +E L S + + ++ V +++ +I Sbjct: 424 FIPAHDNVEISTLERFNKSDKENIDL---IISSIDIPQSKTPFVKVTPLVSNQDYIKIME 480 Query: 431 FLATAFIR--------------QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQH 476 I+ + + +L + Sbjct: 481 AYTKYLIQGAPFGLSDSLDRNFEVDVLSKYVNLKLISLQNLFSDKADCLNSMIDELEKRK 540 Query: 477 HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL 536 + + + RE G + + +A+PH + + ++L + + + + ++ Sbjct: 541 LVLPTFRKSVFEREDIGNTNLESGVALPHADPTTILKSHIYIVSLKKSINWGDRTVKLII 600 Query: 537 IACAAADARHELK-IFSYLASILCQ-HPAEIIAGLTGYEAFMELLHKG 582 + + + E++ + L + + + + + +++ G Sbjct: 601 MVNLSEEDLQEIREVVEELYQFIDEKKKVDALVKVNDSVQMLQIFSTG 648 >UniRef50_Q63A16 Possible transcriptional antiterminator, bglG family n=15 Tax=Bacillus cereus group RepID=Q63A16_BACCZ Length = 701 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 92/701 (13%), Positives = 214/701 (30%), Gaps = 124/701 (17%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GS 56 +L+ R + I+ + + + +L VS RT+ DI ++ L + Sbjct: 2 ILDTRSINILQQIIQAEDYVSINQLIDLIQVSKRTLYYDIKKIDDWLQEEGLHSIEYIRH 61 Query: 57 AGYQLEIFER-----------RSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPE 105 GY L + + ++ K +L LL+ L + L + Sbjct: 62 LGYCLNKETKQMIVKKLNECMNNQYEYSPKERKIWLILYLLIQEKRILLKDLINLLQVSR 121 Query: 106 TWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILL-------------ANLLR 151 V L +LK + L S G+ I E+ + LL L+ Sbjct: 122 NTVLADLKKLKVELNKYNLSLHSFRKEGYQIVGNEQSKRNLLILSLSQIISQNGWEYLIS 181 Query: 152 KDPFLIPLAGITRDNLQHLSTACD-------NQHRWPLMQGDYLSSLILAIYALRNQLTD 204 + +++ G D L + + + L +L + +Y ++ Sbjct: 182 QVNYIMSDMGSETDTLARETLYIIKKILANCEEFLGVQYTDEVLENLSVYMYLFHRRILK 241 Query: 205 EWPQYPGDEIKQIVEHSGLFL------------------GDNAVRTLTGLIEKQHQQAQV 246 + K +++ S F D T L+ + + Sbjct: 242 GKCVEMEEAEKNVLKDSKQFEAAKYIAKQFERAFVVKFPIDEIYYITTHLLGAKVNYQEN 301 Query: 247 ISAD--------NVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSS 297 + V +++ A + D L ++ H+ + E Sbjct: 302 VYEKNNMDEIHSIVDCMIKDFQHYACVLFQDFNGLFTDLYLHMKPAFYRVKYGIEIENPL 361 Query: 298 MNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH----QNERQPI 351 N ++ + + ++ I E + + D + + ++F + + + + Sbjct: 362 RNTIQENYEEVYFLTKKVIHHFEEYVRKSVSDDEIAYVTMHFGAWMRKEGIVPNPRKTAL 421 Query: 352 ILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVN 411 ++ + + + Q +E+ N ++ A S E + +++ ++ ++ Sbjct: 422 LVCPNGIGTSRMLQYQLEKLFSNIDILNAISKREYESNTFDVDCIITTT----EIEKGNV 477 Query: 412 NYITVKNIITAAGIEQIKHFLA-------------------------------------- 433 V I++ + + + Sbjct: 478 PVFKVNPILSDSEKAALLRKVNGVLYGENQKDSVDLVMGIIQKYADVVDEESLKRELIEF 537 Query: 434 -------TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRI 486 + +P F R ++W+ R L+ +I + + Sbjct: 538 MSGPAYFEKEEKYKPMLNELLTREFIQLEDRVDNWKDAIRLAADPLLQNQYIFEEYINEM 597 Query: 487 I-AREGEGEN-LIVNRLAIPHCWSE-QERRFRGFFITLAQPVEVNNEVINHV--LIACAA 541 I E G +I ++AIPH E ++ + L + V + + + V +I AA Sbjct: 598 IVNVEKLGPYIVIAPKIAIPHARPEAGVKKLGMSLLQLKESVLFSEKQEHAVNLIIVLAA 657 Query: 542 ADARHELKIFSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 D LK + L+ +L E++ + ++++ K Sbjct: 658 IDNETHLKALAQLSEMLSDPKNVEMLIHSNSIDEMLKMIAK 698 >UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P4U6_9CLOT Length = 640 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 96/644 (14%), Positives = 222/644 (34%), Gaps = 71/644 (11%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA- 57 ML RQ++++ LE ++ T ELA++ +S RTI D+D + ++ Sbjct: 1 MLTTRQIELLKYLEKREEYTTTKELAEEFSISSRTIRNDLDAIEYSTKDLPIKIERTPRL 60 Query: 58 GYQLEIFERRSFFQLLQKHDNDDR--------LLALLLLNTFTPRAQLASALNLPETWVA 109 G +LE E+ +L +D + + +L+L T QLA + + + + Sbjct: 61 GIRLEFLEKVGLDSILYTNDMKEYSRDERAVVIAMMLILTDKTTIEQLADQMEVSKNTLV 120 Query: 110 ERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKD--------PFLIPLA 160 E L ++ +E L + G I EEK ++ N+ K +I Sbjct: 121 EDLNSVEALFEYYGITLERKSYYGLTISGDEEKIRNMVFNIYLKITKQKTINLDEIIKEY 180 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGD-------- 212 + ++ + + D + L I N+ D + Sbjct: 181 TVIKEEIPEEIIYKIEDNERIKYSDDSVKELKNMILITLNRAFDGFYMGADTGYLRGREK 240 Query: 213 -----EIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNV---------QGLLQR 258 I++I++ + + + + + L+ + + D + Q L+Q Sbjct: 241 PDNFQIIEEILKREEIQVTEGDILYMIMLLNASKKIKGISLEDTIEDRKIMMATQSLIQE 300 Query: 259 VPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 I +++ + I HL + E M ++K + ++++ + Sbjct: 301 FCRITKIDMKIGQDISTQIMMHLKVAIYRLKNHIEIENPLMEDIKYSSLFVYEITKKILR 360 Query: 318 LLREQLDIPLFDSD--LIGLYFACALERHQNER---QPIILLSDQNAIATINQLAIERDV 372 D+ +++ +YF + + N I++ + + A + + + V Sbjct: 361 EYEAMFDVVFPETEIAYTTMYFETLFQENYNMNFTVNVIVVCNSGLSTAVLLKQRLHMIV 420 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 VI +S+++ E I P II+ ++ I V ++ A + I+ L Sbjct: 421 PELNVISTCRVSDVIKEAENINPDFIISTVPLKMNQ--YKVIEVNPLLNAEDVNVIRRNL 478 Query: 433 ATAFIR-------------QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHIT 479 + N++ W+ + L+ ++I Sbjct: 479 TNLSYNRRNEHLAKQMEAIHKMPMEELFQKDCCKFNLKISDWKEAVQVAADPLIQYNYIQ 538 Query: 480 ADEAQRIIAREGE--GENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE---VINH 534 + II + + +A H E + LA+P+E + + Sbjct: 539 KEYVDDIIKIIQTIGNYMVFIPEIAFVHAPPEHVNEDHMSLLKLAKPIEFGTKSKVDVKV 598 Query: 535 VLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMEL 578 +++ + + ++ +++ L + + + +T Y+ E+ Sbjct: 599 IIVIASKEENKNLVELMQIL---MKEDNVAKLKNVTNYDDIREI 639 >UniRef50_A6QKC9 Transcriptional antiterminator BglG family protein n=61 Tax=Staphylococcus RepID=A6QKC9_STAAE Length = 624 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 102/625 (16%), Positives = 193/625 (30%), Gaps = 46/625 (7%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 + +R LK++ + P + E+A+ VS RT+ DI +N + G Sbjct: 1 MLDRHLKLLQFFIKNPSKHISSNEIAKHVNVSNRTVRNDIHVINSNFMDDIIVSIKS-KG 59 Query: 59 YQL--------EIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 YQL I ER + Q ++ LL+ N QL L +T + + Sbjct: 60 YQLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQTLQQLEQDYLLSKTVLND 119 Query: 111 RLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLR--------KDPFLIPLAG 161 R++Q ++ L + G +D T+ + +L + +D L L Sbjct: 120 YFVRIQQWCQKFNIALTIKKKQGIVVDGTDNDITNAIIHLNQLSSGHVHVEDLILNELPD 179 Query: 162 ITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ--------LTDEWPQYPGDE 213 + + H+ QH LI I ++ + L + Sbjct: 180 SHQRMISHIIQETLQQHSIETTDIQIQQLLIHLILIIKRKQSLSELDTLNHDSKLISQSC 239 Query: 214 IKQIVEHSGLFLGDNAVRTL-----TGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII 268 IKQI E G L + + + ++ + L++ + + Sbjct: 240 IKQINERLGYDLNEKVINMFSFFIAYHFNKLDIGIERIFIQSYIDRLIELMQQRIHVPFN 299 Query: 269 -DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPL 327 D+ L +N+ H + + +K +P F+ I L DI + Sbjct: 300 EDSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIKKLYPFVFNTLFEAIDKLAIDTDIEM 359 Query: 328 FDSD--LIGLYFACALERH-QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLS 384 + + + ++F A+ER + + +I ++ + I VI L Sbjct: 360 SEDEIAFLTIHFQAAIERRTKTQLNVVIACYYGLGVSNFLETKINNLSEELSVINTIKLE 419 Query: 385 ELVAIREEIEPLLIINNSHYLLDDAVNN----YITVKNIITAAGIEQIKHFLATAFIRQQ 440 + + LLI + + I V + + +I+H + Q Sbjct: 420 NITHYHFDNVDLLITTHDIPKQTLNILPKHLTTIKVAPLFSEDDRHKIRHVVKQKQNPVQ 479 Query: 441 PERFFSAPGSFHY-SNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVN 499 + + I + L A H I + + RE I N Sbjct: 480 AHHHMDTVNFLVVNTEQKSRHTVQIFEEAQKILQAHHAIVEGYIESALEREKSSSTYIGN 539 Query: 500 RLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILC 559 +AIPH E+ + + V + + K L + L Sbjct: 540 FMAIPHGDPEKVLQSHVLIFRTKDVFPWRQHDVKLVFFLAISHKDKAFTKQMMQLIANLD 599 Query: 560 QHPAEIIAGLTG---YEAFMELLHK 581 + L + E L + Sbjct: 600 DDSVNHLCSLDDHSLKQQLFEYLQE 624 >UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=Staphylococcus aureus RepID=A5IPR4_STAA9 Length = 651 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 80/641 (12%), Positives = 186/641 (29%), Gaps = 88/641 (13%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA- 57 ML+ RQ++I+ LL + +A Q GVS RTI DI Y+ + A Sbjct: 1 MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAA 60 Query: 58 GYQLEIFERRSFFQL---------LQKHDNDDRLLALLLLN-TFTPRAQLASALNLPETW 107 G ++ +L K + + L QLA +N+ Sbjct: 61 GIKVTTAHATLLNELEHNLTNQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRT 120 Query: 108 VAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLI------PLA 160 +A+ + ++ + + L G + E+ A+ + + + Sbjct: 121 IADDIKMIQAQLDQYHLKLNYVHNKGFNVIGEEDHYRKAYAHFIHQYMKQAAPFIEADIF 180 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDE--------------- 205 L + + + LI I +L + Sbjct: 181 NSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRH 240 Query: 206 ------------------WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI 247 +P EI I H Sbjct: 241 TNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTE-------HTASSITFEYHD 293 Query: 248 SADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWP 306 + N+ L+ V +++ D +L ++ H+ + + + +P Sbjct: 294 LSQNIHELITCVSQELGIDMSKDNKLHTSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYP 353 Query: 307 AAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER----QPIILLSDQNAI 360 + I+ + + I + + I ++FA ++ER + + ++L Sbjct: 354 QIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSMIKVVLLCGSGIGT 413 Query: 361 ATINQLAIERDVLNCRVIIARSLSELVA---IREEIEPLLIINNSHYLLDDAVNNYITVK 417 + + + + + A S+ +L +++ I+ ++ + + I V Sbjct: 414 SQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTV----PCEISAVPVIHVD 469 Query: 418 NIITAAGIEQIKHFLATAFIRQQPERFFS-------APGSFHYSNVRGESWQHITRQICA 470 I +++ + + ++ + P N + S + Sbjct: 470 PFINQQSRQKLNQIINDSREQRVMKMATDGKSLADLLPEHRIIINEQPLSIESAIAVAVQ 529 Query: 471 QLVAQHHITADEAQRIIAR-EGEGE-NLIVNRLAIPHCWSEQERR-FRGFFITLAQPVEV 527 L+ + ++ I+ + E G +I +A+ H ++ + + + Sbjct: 530 PLINDGIVYSNYTAAILKQFEQFGSYMVISPHIALIHAGTDYVQNGVGFALTYFTEGIIF 589 Query: 528 N---NEVINHVLIACAAADARHELKIFSYLASILCQHPAEI 565 N+ ++ V+ LK L+ L Sbjct: 590 GSKANDPVHLVITLATDHPNA-HLKALGQLSECLSNDLYRQ 629 >UniRef50_C4VSP6 Putative transcriptional antiterminator n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VSP6_9LACO Length = 609 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 91/610 (14%), Positives = 213/610 (34%), Gaps = 36/610 (5%) Query: 3 NERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 NE L I+ T L+ Q G++ RT+ I L + S GYQ Sbjct: 4 NEDILLILQKNSSSWITAKMLSVQLGITERTVKNKIKK----LRAQGVSIKSSVNGYQYR 59 Query: 63 IFERRSFFQLLQK---HDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRY 119 LL + L LL L+ L + E + + + L+ Sbjct: 60 GENTNQKKLLLPQTYSQRKSWLLRYLLQTKDDVNIYDLSQKLYINEVELRKEIQNLETEL 119 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKD-PFLIPLAGITRDNLQHLS------T 172 S+ G + + +E+ + LL+ L+ ++ + + +DN + + Sbjct: 120 SDFDLTLSKMGDNYKVLGSEQNKRKLLSALIYQELKGTLLTKKVIQDNFKLIKVDAVNQM 179 Query: 173 ACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIK-------------QIVE 219 ++ L D+ + +L + + +K I Sbjct: 180 LVLLLEKYELKIDDFDFNNLLLHIVIMIDRGSNNLKSVYSNLKIVNQIVKWIKSNENIDL 239 Query: 220 HSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGH 279 S + L + ++ + Q ++ V +LN+ + + H Sbjct: 240 SSNDVHQLEEMFLLLSDKGVELKKDDDKIQELFQEIVGFVRRTYNLNLNERLFKKRFLPH 299 Query: 280 LLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYF 337 L+R + A MNN+K + P ++ + + + I + + + I L+ Sbjct: 300 LIRLIERCKNNATIHNPLMNNIKQSSPTIYECACLIAYAIHKSYGIEISEEEIAFIALHV 359 Query: 338 ACAL-ERHQNERQPIILLSDQNAIATINQLAIE-RDVLNCRVIIARSLSELVAIREEIEP 395 ++ E+ QNE + I + N + +L + + +I+ ++S++ I + + Sbjct: 360 GNSVAEQIQNENKIICQMYMSNYHDNVQRLLNQINARFSNDLILLDAVSDVNDIMSQTQL 419 Query: 396 LLIINNSHYLLDDAVNNYITV--KNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHY 453 ++++++ ++ + N +T + L R + Y Sbjct: 420 VIVVDSEQQFVNFNTTYISSFFLSNDVTKLQRAIREMKLEIRAKRLKIGLKVFTTPDTFY 479 Query: 454 SNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERR 513 + + ++++ + ++ ++V + + + +++ RE +AIPH + Sbjct: 480 IDNKKKNYKQVISELSNKMVREGIVGPEFECKLLERENISSTAFG-LVAIPHAIDYDAKS 538 Query: 514 FRGFFITLAQPVEVNNEVINHVLIACAA-ADARHELKIFSYLASI-LCQHPAEIIAGLTG 571 + F + V+ N+ I V + + K+F L++I + + Sbjct: 539 SKWFIYINPKGVDWLNQRIYLVFVLAYNSRNDDEFRKVFDELSTIVIDDEKVVKLINSRS 598 Query: 572 YEAFMELLHK 581 Y+ F+E + K Sbjct: 599 YDDFIERITK 608 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 86/238 (36%), Gaps = 13/238 (5%) Query: 75 KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHF 134 +++ D L+ +++ L+ L + E V ++ +L+ + +S G + Sbjct: 2 QNNEDILLILQKNSSSWITAKMLSVQLGITERTVKNKIKKLRAQ--GVSIKSSVNGYQYR 59 Query: 135 IDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDN-QHRWPLMQGDYLSSLIL 193 + T +K+++L ++ +L+ T+D++ + + L + L Sbjct: 60 GENTNQKKLLLPQTYSQRKSWLLRYLLQTKDDVNIYDLSQKLYINEVELRKEIQNLETEL 119 Query: 194 AIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQ 253 + + L + + G E + S L + LT + + + ++I D V Sbjct: 120 SDFDLTLSKMGDNYKVLGSEQNKRKLLSALIYQELKGTLLTKKVIQDNF--KLIKVDAVN 177 Query: 254 GLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVW-------IAEHRQSSMNNLKAA 304 +L + L I D N+ H++ + + + +K+ Sbjct: 178 QMLVLLLEKYELKIDDFDF-NNLLLHIVIMIDRGSNNLKSVYSNLKIVNQIVKWIKSN 234 >UniRef50_C3RHR0 Predicted protein n=2 Tax=Bacteria RepID=C3RHR0_9MOLU Length = 636 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 89/629 (14%), Positives = 202/629 (32%), Gaps = 52/629 (8%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 L RQ I+ LL++ P + L++ +S RT+ DI +N + +S GY Sbjct: 7 LTSRQFLIIRLLQKNTVPLSANTLSRLLDISPRTLRNDIFQINKNIED--FHISSSKNGY 64 Query: 60 QLEIFERRSFF-----QLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 QL + + ++ ++ + + +L LL + +L+ + E+ VA + Sbjct: 65 QLTLLSENAHMLINDIKISEQSKSTNIILQYLLNHPSCHLLELSENCYMSESSVARCIKT 124 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLL-----------------RKDPFLI 157 +K + R + +E + L A+L+ +D L Sbjct: 125 IKPLLNKYHLTVERKNDIFSLHGSEYDKRALFAHLIGIEASQPITSLQHFQQYFQDFHLS 184 Query: 158 PLAGITRDNLQHLSTACDNQH-------------------RWPLMQGDYLSSLILAIYAL 198 + I L+ + D+ H + Y S I L Sbjct: 185 EVEAIIDSVLKKYNIRVDDIHYQNLVMNTSITLQRIFVGSDIEPLPFSYSLSNDEIICQL 244 Query: 199 RNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQR 258 L +Y Q L +++ E Q ++ +L Sbjct: 245 SKDLCHNLEEYFNLHFAQTDNEYMQVLCIGSIKINEENYETQILYNDYSFVYKIKEILDD 304 Query: 259 VPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 + SL + + + H+ R + NNLK P ++++++F Sbjct: 305 LVEHFSLQLNYQMSLNHFALHIHRLFFRNHSSLYFQNDFHNNLKNTHPFIYELAVYFAYK 364 Query: 319 LREQLDIP--LFDSDLIGLYFACAL---ERHQNERQPIILLSDQNAIATINQLAIERDVL 373 +E +I + + L+ ++ + E ++ + + + + N + + Sbjct: 365 FQESFNITVNINEIGLLAIHLGLMIQSNEENKQYLKALCICPEYNDLRKHFANQFLLNFG 424 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLA 433 + +I+ S+ + L+ N + D V + + + I ++ Sbjct: 425 DNVQLISFISSKKNIQDYHFDFLISTINDYESPDCMVISPLLLSQDIDKLNLKINLLKEK 484 Query: 434 TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 + E + NV + +C+Q++ D + RE Sbjct: 485 KKKDLLKKELSKYIDPKLFFRNVDFTCKKDAILFLCSQMLKHGDAKTDFVDSVFEREKIS 544 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIF-- 551 N+ A+PH + + R F+ + + + ++ V++ Sbjct: 545 TTSFFNKFAVPHAIHFGDVKTRITFLLNDKAIPWGDTSVHLVMLISINEKDIMTFNTIYS 604 Query: 552 SYLASILCQHPAEIIAGLTGYEAFMELLH 580 S + +L + + + ++ L Sbjct: 605 SIIDLLLDDESFDEMLKIKTFDELSVYLE 633 >UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9A5_9FIRM Length = 705 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 92/659 (13%), Positives = 198/659 (30%), Gaps = 109/659 (16%) Query: 2 LNERQLKIVDLLE---QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSA 57 L+ K+++ L Q T LA+ GVS RT+LR++ + + F + Sbjct: 46 LSANARKLIEQLLSLPQGWVTAAALAESIGVSRRTVLRELPAVEQWMQAAGAHFVRNPGK 105 Query: 58 GYQLE-----------IFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 G L+ +L + L LL A LA AL + E+ Sbjct: 106 GLLLDEAPERRDALRTQLNSGDRKELSRAERRQQLLTRLLSEQEPCKTAVLARALGVSES 165 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 ++ L L+ + + RPG+G ++ +++ LLR LA + Sbjct: 166 TLSADLDELETKLHPYRVEMFRRPGVGVWLQGDASSYRRVVSALLRSSMPEKELAEVLCG 225 Query: 166 NLQH-------LSTACDNQHRWPLMQGDYLSSLILA---IYALRNQLTDEWPQY------ 209 + L T + L Q + L L AL T Q Sbjct: 226 RMPENEIFSTLLDTKTAEKVWAALQQFEQEEQLHLPDAGFLALAIHCTLTIQQLRQGGDK 285 Query: 210 -----------------------------PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 P +E + + + +LG +E + Sbjct: 286 GSAPRGLRPAGNHAARLVAALNRAFGLTLPPEEAQYLELYLAAYLGAEDPWGSAQEMELR 345 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMN 299 + +A L++ + ++ L +++ HL L ++ Sbjct: 346 NLEA---------ALIREMEKALHTDLSGYTSLRDDLYCHLRPMLLRVEQNIRTENPQLD 396 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIP-LFDSD--LIGLYFACALERH---QNERQPIIL 353 ++ A+P + + +++Q +P + D + + ++F LE++ + + ++ Sbjct: 397 TIRTAYPGLWKATRAACDAVQQQFVLPAISDDEAAYLAMHFGAVLEQNAMFRLRLRVVVA 456 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSELV-AIREEIEPLLIINNSHYLLDDAVNN 412 + + + + +V S+ EL A + II+ LD Sbjct: 457 CPLGMGSSRFLASRLGNEFPSLQVEGCCSVRELNTADLRRRKIDFIISTVPLELDYPA-- 514 Query: 413 YITVKNIITAAGIEQIKHFLAT-------------------------AFIRQQPERFFSA 447 + + + +K + + + Sbjct: 515 -VCISPSLLEPDRAVLKDAITRYSQNRAEPEPAVQPVQDTACAGSKLQYYARLTRSMTGL 573 Query: 448 PGSF-HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLA-IPH 505 S + Q Q++ RE G+ I + A + H Sbjct: 574 LEHLTIQPVKVPGSRAALIHAAAQLFCPQEADARLVEQQLRRRETLGDTYIKSLYALLLH 633 Query: 506 CWSEQERRFRGFFITLAQPVEVNNEVIN-HVLIACAAADARHELKIFSYLASILCQHPA 563 C + + R ++ PV ++ +++ +++ ++ L + P Sbjct: 634 CRTSAVKDCRLGYLQAQPPVYEPGRIVLGALVLLAPDDGNGVPVEVMQNVSGQLIETPR 692 >UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03XN7_LEUMM Length = 663 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 95/650 (14%), Positives = 203/650 (31%), Gaps = 77/650 (11%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA- 57 + +++ ++ L T EL+ ++ RTI I L TL + + + + Sbjct: 1 MRKKERDLLIYLVDNSDRFVTSEELSTLLSLTPRTIRNYIKILKETLVSQGALLDAKPSL 60 Query: 58 GYQLEIFERRSFFQLLQKH-----------------DNDDRLLALLLLNTFTPRAQLASA 100 GY+L I +F L K+ L L++ N LA Sbjct: 61 GYRLHISHPVTFDLFLNKNYELSQWLINEDSNNISDRQKYILNKLIIENQKFLIDDLAEK 120 Query: 101 LNLPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRV-ILLANLLRKDPFLIP 158 L + T +++ L +++ + S+ +G FI E + +L I Sbjct: 121 LFVTRTTLSKDLSIIRKVLMPYRISVESKANIGVFITGLERDKRHFILDYFFSHSENSIQ 180 Query: 159 LAGITRDNLQHLS------TACDNQHRWPLMQGDYLSSLILAIYALRNQLTD-------- 204 + + +S D + D+ I+ AL Q Sbjct: 181 HYMKNKSFFKAISFDQITIIVLDECREAGIHLTDFTIQNIVLYIALSVQRLKCGFELQAA 240 Query: 205 ---------EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGL 255 +I L ++ V LT + Q + + + +Q Sbjct: 241 PVDINPEIRNVSDVARKIFSRIESGLALKFPESEVDYLTIQLMAQGKNINIQNDGPLQRD 300 Query: 256 LQRVPGIASLNI-----IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 L + L D L +NI HL + + + + +K + + F Sbjct: 301 LDMILQRIELETDYPVTKDYALKKNIIEHLKPMIVRLEQGIQLKNPLLQEIKTNYLSEFM 360 Query: 311 MSLHFITL--LREQLDIPLFDSDLIGLYFACALERHQ--NERQPIILLSDQNAIATINQL 366 + +I + DI + + L+ A E+++ N+ + +I+ + A + Sbjct: 361 DTKRYIKWSPYLSRFDINDDEVAYLALHLMAAAEKYKNLNKPRALIICATGYGSAQLLNN 420 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPL-LIINNSHYLLDDAVNNYITVKNIITAAGI 425 +E++ + I + + LII+ I V +T A + Sbjct: 421 RVEKEF-GMYLNIVDIKGYYEVDDTTLSNVNLIISAIDLSTRVFKVPVIQVSIFLTEADV 479 Query: 426 EQIKHFLATAF---------IRQQPERFFSAPGSFH-----YSNVRGESWQHITRQICAQ 471 ++I FL +Q + F + + +++ Sbjct: 480 QKINEFLDNEQVRNKYIAVEKKQPINSVLNHFDQFIDQSSFKIWQVSPHRKELLQELTNM 539 Query: 472 LVAQH--HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 L++ + + ++I RE + + +A+PH R + + V ++ Sbjct: 540 LMSNEPTELKHEFLEQIDQREQLSSIVFSDTIAVPHPAMPMSRVPKIAIGIIPNGVRWSD 599 Query: 530 E--VINHVLIACAAADARHELKIFSYLASILCQHPAEI--IAGLTGYEAF 575 E I V + + + L + ++ E + + F Sbjct: 600 EHPNIQLVFLLSPSYRSNKGLTETTQAIVKFTENTEEQGRLVASINFSEF 649 >UniRef50_UPI0001C35E6F mannitol operon transcriptional antiterminator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35E6F Length = 695 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 86/683 (12%), Positives = 201/683 (29%), Gaps = 105/683 (15%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR--IFASGSA 57 LNER KI+D++ ++ + E+A + VS RT+ ++D N L+ K I Sbjct: 6 LNERTKKIIDMILKRVGALSIQEIADELAVSTRTVYNELDRANDWLHTKHLPDIQIIRGK 65 Query: 58 GYQLEIFERRSFFQLLQKHDNDDRLL------------ALLLLNTFTPRAQLASALNLPE 105 E+ SF ++Q D + +++ L + + Sbjct: 66 IQPFTEEEKGSFEAVMQTEQPHDDYIFTPSERTRMIVCQIIVSREPVYVENLMNTCLVSR 125 Query: 106 TWVAERLPR-LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITR 164 + L + Q + L G++ID + + L+ + Sbjct: 126 NTIFVDLQAVISQLHAYQLGLGYEKKRGYWIDGDPIRIRAIFFLYFNMLEPLLSSGKLRF 185 Query: 165 DNLQHLSTACDNQHRWPLMQG-DYLSSLILAIYALRNQLTDEW----------PQYPGDE 213 L + + G Y+ + +LA+ A+ + + + Sbjct: 186 LYLDEMEFHLKQIEQVEKQLGVSYVRNDMLALAAMLPVMEKGEDSLYFTDVSTEKVKVSK 245 Query: 214 IKQIVEHSGLFLGDNAVRTLTGLI----------EKQHQQAQVISADNVQGLLQRVPGIA 263 Q+V L D L+ + + + + L+ A Sbjct: 246 EYQLVMEYFPTLSDMEKVYLSLHFLGGRLESYSRTEADTGDNEFALEITKNLITEFEREA 305 Query: 264 SLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQ 322 + + L+ N+ H+ L + + +++ +P FD + + L +Q Sbjct: 306 CVLFERKEDLIRNLYRHIAASLYRYRFGIQIGNPMAEDIRREYPYIFDTTRAVVKYLEQQ 365 Query: 323 LDIPLFDSD--LIGLYFACAL---ERHQNERQPIILLSDQNAIATINQLAIERDVLNCRV 377 + + + DS+ + L+F L ER + E + ++ + A + ++R + R+ Sbjct: 366 IGVLISDSEVAYLALHFGAHLEYAERDEKELRILVACMNGVATGNMISHELKRILPQARI 425 Query: 378 IIARSLSELVAIREEIEPLLII-------------NNSHYLLDDAVNNYITVKNIITAAG 424 + + SE+V + + ++ + + N+ +++ Sbjct: 426 VAVMAASEIVNPQNMCDIIITSVHVKAVVPVIVVNTILNDFDRKNILNHPLIRSRFGFID 485 Query: 425 IEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGES------------------------ 460 + + + Q F + Sbjct: 486 TDALFKVVKKYVDPQHHMELRRELEKFFARQKEEKQPVLKPDIWRLTDFLTEDRILFLDR 545 Query: 461 --------------------WQHITRQICAQLVAQHHITADEAQRIIAR--EGEGENLIV 498 W+ + L+ + ++ + + I+ R E I Sbjct: 546 NGRERTEEKREWSGDGYSTGWERALYTAASPLLERGSMSEEYVRCIVDRMVEAGPYMFIT 605 Query: 499 NRLAIPHCWSEQ-ERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASI 557 L + H E + A +E V+ D + + I + Sbjct: 606 RDLILAHARPENGVKHLDLSIGIAADGIEFEGGKTARVIFCLVVEDQQKHMGILQDIRKT 665 Query: 558 LCQ-HPAEIIAGLTGYEAFMELL 579 L + + + ++L Sbjct: 666 LAKPRQIDELVRAESAYEVCDIL 688 >UniRef50_Q721P5 PRD/PTS system IIA 2 domain protein n=15 Tax=Listeria RepID=Q721P5_LISMF Length = 632 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 93/625 (14%), Positives = 203/625 (32%), Gaps = 53/625 (8%) Query: 6 QLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 Q +I+ L +Q T ELA + RTI +I +N + S GYQ+ Sbjct: 4 QKEILAYLHKQENKWVTSNELAAFCECTTRTIRNNISKINEATPN---LIRSAKQGYQIN 60 Query: 63 IFERRSFFQLLQKHDNDDRLLALLLLNTF--TPRAQLASALNLPETWVAERLPRLKQRYE 120 + +LL L+ N+ +LA L + E + + + +LK + Sbjct: 61 QRIPFELQTESDVTERKSKLLLELIKNSTKGVDLFELADILYISEVTLKKDIQQLKNELK 120 Query: 121 RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW 180 + E + + +LL ++ I + + Q+ Sbjct: 121 EADVQIVTSKDRIKLIGKERAKRKYMISLLYEEGGYRESIKIRIQEMIEFVSIDKLQNIV 180 Query: 181 PLMQGDY--------LSSLILAIYALRNQLTDEWPQY---------------PGDEIKQI 217 + + + +++L ++ +I +I Sbjct: 181 KEVLTEESITTNQYSMMNIVLHYAISIVRIQQGNTLIETQKTLIRKHSKEYEISKKIAKI 240 Query: 218 VEHSGLFLGDNAVRTLTGLI--------------EKQHQQAQVISADNVQGLLQRVPGIA 263 + A GL+ + Q + ++ +L V Sbjct: 241 LSEEYQIHFSEAETKQLGLLYVGLQNEQSANANHGELDQFVDKKIIEALKSVLANVEETY 300 Query: 264 SLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 +++ + QL + H+ + A R S+ ++K ++P FD++++ +LL+E+L Sbjct: 301 LIDLQNEQLFIKLAIHVQSLYYRSRYKAYTRNLSLLDIKTSYPVTFDIAVYISSLLQEKL 360 Query: 324 DIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIAR 381 I + + I L+ LE + + + + +++ Sbjct: 361 AIDFNEDEISFIALHIGSFLESENRDYIRLEIGLLIEDYHDLRTNMLKKLRARFENEATI 420 Query: 382 SLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV----KNIITAAGIEQIKHFLATAFI 437 L E E + +L N L + + I+ K L Sbjct: 421 KLIENEDSEENFDIILTTNRDIALEKAGSIFIHPLLTTKDIKKISNRIQTKKKILENHLR 480 Query: 438 RQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI 497 QQ +R+ + + + I Q+ +++ Q +T + +++ RE Sbjct: 481 GQQIDRYIVRSLYANQIDPSELTPAKIREQMISKMEKQTFVTPEFKEKVEKRERMAPTSF 540 Query: 498 VNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASI 557 + +AIPH + +TL +P+ N+ I + + + E F Sbjct: 541 PSGIAIPHSIKNDALQSGVSIMTLQEPIYWNDVKIKIIALVAISKKDATEFNDFFEKFVE 600 Query: 558 LCQHPA--EIIAGLTGYEAFMELLH 580 + P + ++ +E F++ L Sbjct: 601 IVSEPINTKRLSMAESFEEFIQKLK 625 >UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JT03_LACRH Length = 598 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 73/544 (13%), Positives = 184/544 (33%), Gaps = 49/544 (9%) Query: 74 QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGH 133 +LA LL + +L+S + + +A + +K+ + + G Sbjct: 56 DSKSRKYAILAQLLNDKHLSYQRLSSDYLVSRSSIANDIAFIKRLLAKDNVALNFDNTGT 115 Query: 134 FIDETEEKRVILLANLL-------RKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGD 186 FI+ EE++ ++ ++ + L + + + + + Sbjct: 116 FIEGNEEEKQKIIKRVVATTLEGKHERSVLEMFVDPSLIRIIRKTLVSKVHDLDLEVPEN 175 Query: 187 YLSSLILA--IYALRNQLTDEWPQYPGD----------------EIKQIVEHSGLFLGDN 228 YL+ +IL+ + R Q+ E+ + VE +G++ Sbjct: 176 YLNDIILSTTVLISRGQVAKHLTPITASSLSRLLLDLDKYPVVYELLESVEQAGIYKFSK 235 Query: 229 AVRTLTGL--------IEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGH 279 Q + + L++ V +LN+ D QL +++ H Sbjct: 236 DELRYLSYVVLGNGLRFFMQDGTIPIPFERKIHALIETVSEKINLNLTKDVQLEGDLSLH 295 Query: 280 LLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYF 337 L + + ++++K +P+ F + + + + + + D + + ++F Sbjct: 296 LYQMVLRLQADTTVINPLLSDIKKNYPSLFGIVWYALVDFATENHLTISDDEISFVTIHF 355 Query: 338 ACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLL 397 A+ER + R+ + + + + + + + + + +I S + ++ ++ + L Sbjct: 356 QAAIERSKKRRRILFVCLNGIGTSALLSAQMRQILPDVSLIQIVS-RDALSQQDLSDVAL 414 Query: 398 IINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQ---------QPERFFSAP 448 II+ L T+ ++TA +++I + + Q + Sbjct: 415 IISTI--PLPKQSVPIATISPMLTADDMKKIMNKYIDVVMAQKPSLPAVCNPSMNKVLSI 472 Query: 449 GSFHYSNVRGESWQHITRQICAQLVAQHH-ITADEAQRIIAREGEGENLIVNRLAIPHCW 507 H E+ Q + + Q A + + RE + N AIPH Sbjct: 473 LRKHVYFSTVENQQEAVDYLLSTTPWQSVEAQASYKRSVFRREELQTTYLGNGFAIPHGD 532 Query: 508 SEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIA 567 + +P++ N + V++ + D + ++ L + I+ Sbjct: 533 PSLLETSHVSVLFPEKPIKWGNNKADVVIMLMVSMDDKQSMEPIMDLIMQGINNKDWFIS 592 Query: 568 GLTG 571 +T Sbjct: 593 KMTE 596 >UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbiobacterium thermophilum RepID=Q67LZ9_SYMTH Length = 634 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 88/625 (14%), Positives = 177/625 (28%), Gaps = 89/625 (14%) Query: 32 RTILRDIDYLNFTLNGKARIFASG-SAGYQLEIFE---RRSFFQLLQKHDNDDRLL---- 83 R++ D++ L + S GY LE RR +L+ + Sbjct: 6 RSVRYDLELLCDWVAAHGARLVSTAGVGYHLEGDTDRVRRHLDRLMTGGPPPSEYIPSPR 65 Query: 84 --------ALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFI 135 LL + + LA L + ++ V L + R +R G + Sbjct: 66 ERIRRLLLMLLSDDAPRRLSVLADRLGVGKSTVHTDLATAESWASRRGLALARGHAGICL 125 Query: 136 DETEEKRVIL-------------LANLLRKDPFLIPLAGITRDNLQH------------- 169 E LA LL + P PL + R + Sbjct: 126 RGAEPHWRRAIVDLVGELADEAQLAMLLEEHPDAAPLQALLRPLVPRVSWGRLGDLLREL 185 Query: 170 ------LSTACDNQHRWPLMQGDYLSSLIL---------AIYALRNQLTDEW-PQYPGDE 213 + A Y + A+ L + + P E Sbjct: 186 GAPELSICVAVMLSRLQAGHTLSYSPDQVSRGLSSPWGREAQAICRALESRFGVRIPNTE 245 Query: 214 IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQL 272 + T + + + V + + D + Sbjct: 246 AAWLALQL--------EATRAVNPAPGRDIVHPADLELAEQMAVLVETRLGIGLRQDREF 297 Query: 273 VENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD--IPLFDS 330 + + HL ++ ++A +PAA + L +P + Sbjct: 298 LMGLALHLRPIAERLRRGEAVENPLLDEVQAKYPAACLAAQDVGRALSAIWGLTVPEPEI 357 Query: 331 DLIGLYFACALERHQNERQPI----ILLSDQNAIATINQLAIERDVLNCRV-IIARSLSE 385 + ++ A ALER + R+ + I+ S + + I + + + + Sbjct: 358 GYLAIHIAAALEREKLRRRTVPRALIVCSSGVGTSALLVTRIRSLLPEIQPGRVVSAFRV 417 Query: 386 LVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH----FLATAFIRQQP 441 + E+ L++ V + V ++ + +++ + A+ +QP Sbjct: 418 REVLAEDPHDLVVATCQVPPCGLPV---VRVSPLLGEDDVARVRRTVMALQSEAWRGRQP 474 Query: 442 ERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII--AREGEGENLIVN 499 +V ++W+ R LV ++ ARE ++ Sbjct: 475 VLSELLTAETIALDVDAQNWEEAIRAGGDLLVRAGLAEPRYVDAMVRTAREYGPYIVLGP 534 Query: 500 RLAIPHCWS-EQERRFRGFFITLAQPVEV---NNEVINHVLIACAAADARHELKIFSYLA 555 A+PH + R + L +PV +N+ + V+ A D LK L+ Sbjct: 535 GFALPHARPGDGVLRLGMSLVRLRKPVPFGHPDNDPVRLVVCLGA-IDNETHLKALMELS 593 Query: 556 SILCQ-HPAEIIAGLTGYEAFMELL 579 +L E + + L+ Sbjct: 594 ELLANPQSVEALHTAADVAEVLRLI 618 >UniRef50_C9XL63 Putative transcriptional antiterminator n=9 Tax=Clostridium RepID=C9XL63_CLODC Length = 592 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 97/599 (16%), Positives = 220/599 (36%), Gaps = 31/599 (5%) Query: 2 LNERQLKIVDLLEQQPRTPG--ELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + RQ+ I+ +L T L+Q+ G S +TI +I +N L + GY Sbjct: 5 ITARQINIIKILLNSKDTISGIALSQEIGCSSKTIQNEIKDINKQLRNGKILSI-RGVGY 63 Query: 60 QLE--IFERRSFFQLLQKHDNDDRLLALLL-----LNTFTPRAQLASALNLPETWVAERL 112 +LE E L D + ++ +L LA ++ + + V L Sbjct: 64 KLEGSFDEVNLNSNLYDDVDRVEYIIRKILTLSNEEKNTIKLEDLADSMYVSVSTVKNDL 123 Query: 113 PRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLS 171 +K+ E+ + S+ G + E+E+K + + +L K + L D+++ Sbjct: 124 KEVKRILEKYSISVKSKHKQGICVLESEDKILNCIVDLSNKRDNQLSLNDFLNDDIKE-- 181 Query: 172 TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVR 231 + + D L+ L + + + K + +N Sbjct: 182 ----RKLLIKKLLLDILNENGLVLTDIEFKSVLNNILVMLSRHKYNEKEFIENYIENYRS 237 Query: 232 TLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVEN-ITGHLLRCLAAPVWI 290 + ++E + Q + I ++++ + + S++I + ++ E + H+ Sbjct: 238 KRSSILENE--QNKEIIINSIKTFCKNLKLATSIDISNDKVFEEFLYKHISSLCKKIKLG 295 Query: 291 AEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER 348 ++K +P AF+++ + + L I + + + I L+ A+ER Sbjct: 296 INQSPIMAQDIKIKYPFAFELANIAKKTIEKDLKIEINEDEVANIALHIGGAVERASYNN 355 Query: 349 Q-----PIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSH 403 + II+ + + + + +E I+ S LV + I+ +I+ Sbjct: 356 KDKVFKTIIVCTSGIGTSMLIKAKLENIFKEKLEILKIIPSYLVEYIKVIDVDFVISTVP 415 Query: 404 YLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQH 463 + D I + I++ I I+ ++ T I + ++++ + + Sbjct: 416 IEVGD--VPVINISPILSEKEIRLIEKYIETGNIYLDLDIKSLFDSELFFTDLVFKRKEE 473 Query: 464 ITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQ 523 + + ++LV + +I D + RE I N + IPH + + L + Sbjct: 474 VIDFMASKLVQKGYIDEDMKKSYFEREKIATTEIGNMVTIPHGAIGKIFDNKIAIGILKK 533 Query: 524 PVEVNNEVINHVLIACAAADARHELK-IFSYLASILCQ-HPAEIIAGLTGYEAFMELLH 580 P+ + +++ D + + IFS + + I + +E F+ L + Sbjct: 534 PISWEISDVRLIIMLALDKDKILDYEVIFSKIYKRVDSIAKVISICENSSFEKFVNLFN 592 >UniRef50_C9XQF7 Transcription antiterminator n=6 Tax=Clostridium difficile RepID=C9XQF7_CLODC Length = 664 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 69/634 (10%), Positives = 191/634 (30%), Gaps = 59/634 (9%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 M ++ ++ ++ LA VS R+I + ++ +N T S G Sbjct: 28 MKTSKKELFLNFIKTQHDWIDSSTLANYLNVSTRSIRKYVNEINST----GEFILSSKKG 83 Query: 59 YQLEIFER-----RSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLP 113 Y++ + S + + + L L++ + L+ L + + + Sbjct: 84 YKVNLNNNCQTKVDSSENISPDNRLNLILKELIVNSNGINIFDLSEELFVSPATIEGDIV 143 Query: 114 RLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTA 173 + + + + E + L+++++ K+ L+ + Sbjct: 144 KANKFIGSYNLKIKQSKFLLKLIGNESAKRKLMSSIIFKETGSDFLSLFDVQKIYQEYNL 203 Query: 174 CDNQHRWPLMQGDY--------LSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFL 225 + + Y +++++L + +++ + + I ++ + + Sbjct: 204 TKLKENIIYILKKYNLFINEYAINNILLHLMITIDRIKKNNYIESVEVVNYIDNNNDISI 263 Query: 226 GDNAVRTLTGLIE------------------------------KQHQQAQVISADNVQGL 255 + L + + Sbjct: 264 SRDISNFLESEYNLTLTSAELYYLVFQLTNKTTVLNYHEMDTKSLPNYIDEHFVKLTKKI 323 Query: 256 LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 ++ V + +++ D + V T H+ ++ R LK ++P +D+S++ Sbjct: 324 IKNVYDLYFIDLSDDEFVVKFTLHVKNLISRAKNNQVLRNQIPQKLKDSYPLIYDISVYI 383 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIE--RD 371 ++ +I + + + I L+ +R + I+ + + Sbjct: 384 CNQIQILENIEIDEDEISYISLHVGSFFDRQKLLEDKILCALITPNYYDLQFKIVRDLEK 443 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 N + I + S+ + + + ++I + + F Sbjct: 444 RFNESIEIIQIFSDTHNLDFDNKVDMVITTLPISDRCPIPFVYVNPYLNRKDYDNIQSKF 503 Query: 432 LATAFIRQ----QPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 + + Q S N+ +S + + + L ++ + ++ Sbjct: 504 IQIKDRKNILTVQNHLEMYFSESLFMKNIYLDSAKDYIKFMGNILYKNKYVKPNYIDDVL 563 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE 547 RE N +AIPH + I +PV+ E + + + + + Sbjct: 564 IREKMSSTAFNNNVAIPHSMKMDALKTGVCLIVNDKPVKWGEEKVQIIAMIPINEKEKEK 623 Query: 548 LK-IFSYLASILCQ-HPAEIIAGLTGYEAFMELL 579 IF IL + + + + Y +FM + Sbjct: 624 FNYIFESFIEILSEWNNVKELTKADNYSSFMNRI 657 >UniRef50_A8FDW3 PTS family L-ascorbate (L-asc) porter component IIA n=2 Tax=Bacillus pumilus RepID=A8FDW3_BACP2 Length = 678 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 90/676 (13%), Positives = 200/676 (29%), Gaps = 106/676 (15%) Query: 10 VDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGS--AGYQLEIFERR 67 + L + +L + VS RT+ +I +N L GY L E+ Sbjct: 1 MLLHTTSYLSIEDLQNRLNVSTRTVYSEIKRMNSWLETHQLSGVQRKDQLGYYLHPHEKE 60 Query: 68 SFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 Q K LL++ + L + + E + +L Sbjct: 61 VIIQKADTILVGHDYEPCVKERRAILLLSIACNEKYLKIDDLMKLTKVSRNTLLEDMKQL 120 Query: 116 KQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAG----------ITR 164 K+ + L + G+ I E + L + +I I+ Sbjct: 121 KEALSKQQLTLHYQAACGYLISGEERAIRLALKPYIHSIRTMIKNEKAFSSFWLKGPISY 180 Query: 165 DNLQHLSTACDNQHRWPLMQGDYLSSLIL--AIYALRNQLTDEWPQYPGDE--------- 213 + L+HL + + + D L L L Y R +L + ++ Sbjct: 181 NRLKHLLEQSEQELKL-EFADDMLDQLSLDLFFYFKRMKLGRDIHLSNEEKRTLQETDEC 239 Query: 214 ------IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQ--------AQVISADNVQGLLQRV 259 + +I + +GL + D+ + L+ L +Q + + + ++ Sbjct: 240 LAAIRFMARIQKETGLHVHDDEIYFLSTLWLSAKKQKLPSSQNPEEHLIRTIARQMIFDF 299 Query: 260 PGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 A ++ + + L +N+T HL+ ++ + ++K P FD++ + Sbjct: 300 QRYACISFEEYEALEQNLTMHLIPAYYRLIYHIDINNELTESIKKTQPEVFDITQKVVCH 359 Query: 319 LREQLDIPLFDSD--LIGLYFACALERHQ----NERQPIILLSDQNAIATINQLAIERDV 372 L + + + + + ++F + R R I+ + + + + + + Sbjct: 360 LEKATCSKISEHEMAYVAMHFGGWMRREGISPIVRRSVYIVCGEGIGTSHMLKTQLIELI 419 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 V S + ++ V+ + + Q Sbjct: 420 GYIEVRDLLSKRSYEEMSSIDVDFVVSTTPISFKGKPVHLVHPILTSYEKKTLLQYGEGA 479 Query: 433 ATAFIRQQPERFFS----------------------------------------APGSFH 452 T F + F+ + Sbjct: 480 ETRFDEKNVNALFNTIQQHTIVKNEKALLRDLKELLHPAYVSHQKGWKPVLNDLLTENTI 539 Query: 453 YSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR--EGEGENLIVNRLAIPHCWSE- 509 E+WQ + L+ Q+ + + +I + +I ++AIPH E Sbjct: 540 NLQQTAETWQEAITKAAQPLLDQNAVQKSYVEAMIQSVDQNGPYIVIAPQVAIPHARPED 599 Query: 510 QERRFRGFFITLAQPVEV---NNEVINHVLIACAAADARHELKIFSYLASILCQHP-AEI 565 +T QPV + + +++ A D+ LK L +L + Sbjct: 600 GVNELSMSLMTFEQPVFFSKDEKKQVRLIIVLAA-IDSITHLKALKQLTMLLSDEKRRKQ 658 Query: 566 IAGLTGYEAFMELLHK 581 + + +L+ + Sbjct: 659 LIEAKDLTSVQKLVDQ 674 >UniRef50_Q5WC76 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WC76_BACSK Length = 706 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 95/694 (13%), Positives = 195/694 (28%), Gaps = 119/694 (17%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + + +I + + L++ VS RTI ++ ++ L + + Sbjct: 1 MKRKHAEIFQEIVRHKGYVPVKSLSETFQVSARTIRYALEEIDDYLRDHQQPPLKRNRKK 60 Query: 60 QLEIF-ERRSFFQLLQKH---------DNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 + ++ +LL + A + L + ++ V Sbjct: 61 GVYYDCDQEVLHKLLGSDTLHFPDAADREAFLVFAFFYAEEKVTVPSICEHLLVSKSTVD 120 Query: 110 ERLPRLK-QRYERTCCLASRPGLGHFIDETEEKRVILL---------------------A 147 + + RL+ + + S P G + +E + L A Sbjct: 121 KDIQRLRTELLADNLRIDSLPKEGFAVVGSEFAKRRWLFRFLKRACRNRGLDMLKQSEAA 180 Query: 148 NLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ----LT 203 + A L + T + Q +L + A+ AL+ L Sbjct: 181 TFFEDYCCKLVEATALEQTLAWIRT-IEQQKNGRFTYETHLEIGLYALLALKRIKMGYLL 239 Query: 204 DEWPQYPGDEIKQIVEHSGLFLGD------NAVRTLTGLIEKQHQQAQVISADN------ 251 E P KQ + F N + L ++ Q + Sbjct: 240 TEKVMVPEQLDKQAFALAQTFDFQKPVTELNTEIYVLSLFLSTAKEEQFLFKMEGNWGQI 299 Query: 252 ---VQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 V + + L D + +I H+ + + +P Sbjct: 300 QVAVMDFVHSITKQTGLPFVNDQEYFSSIYAHIQTMARRLKNELPIENPIADVIVKQYPD 359 Query: 308 AFDMSLHFITLLRE--QLDIPLFDSDLIGLYFACALERHQNE---RQPIILLSDQNAIAT 362 F L QL IP+ + + ++ A ER + + + +I+ A Sbjct: 360 LFAACRMAGNELERTLQLTIPIDEIAYLTMHTCVASERLKRQTLVYRTVIICGHGITNAR 419 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + + ++ + V+ S E+ I++ ++ + Sbjct: 420 LIEESLYARFSSIEVLGTLSRYEVDVIQKLQVDFVLTTLPLSIKGVPCLQVSPFFKDEDT 479 Query: 423 AGIEQIKHFLATAFIRQQPERFFSAPGSF------------------------------- 451 A I+ +A + RQ+ + + F Sbjct: 480 ALIQTTIAQIAKSKQRQRQKHGATNEDFFRSIVEIAKANSKSFMLKPFMEELASLFKKHQ 539 Query: 452 --------------------HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA--R 489 NVR +WQ L IT + A+ +IA Sbjct: 540 LPVYEGVIQPLLAELMSEDHIELNVRAANWQEAIYAAAKPLERSGAITKNYAEAMIASVH 599 Query: 490 EGEGENLIVNRLAIPHCWSE-QERRFRGFFITLAQPVEV---NNEVINHVLIACAAADAR 545 E ++ +AI H E FI LA+P+ +N+ + V+ A+ D+ Sbjct: 600 EYGPYIVLAPGVAIAHARPEDGVNELSVSFIQLAEPIPFGNPDNDPVFLVICLAAS-DSF 658 Query: 546 HELKIFSYLASILCQHPA-EIIAGLTGYEAFMEL 578 LK F + ++ + I T ++ + Sbjct: 659 SHLKAFRSIVKLINDEQRLDAIKAATSKQSLTRI 692 >UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F792_LACPA Length = 651 Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 93/638 (14%), Positives = 185/638 (28%), Gaps = 66/638 (10%) Query: 7 LKIVDLLEQQPRT-PGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQLEIF 64 K + + T +L VS + I +D ++ L G + G E Sbjct: 12 RKTIAFIYTHQMTHYSDLVANLKVSRKKIAAYLDEIDRRLLGSKVQLVRKRNQGIYFEGD 71 Query: 65 ERRSFFQL--------LQKHDNDDRL-LALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 + L H + L L++ N+F LA + + + L + Sbjct: 72 TEQIAEIFHIPSNYDGLDVHGRRSIITLNLIMQNSFVKMDNLADDYFVSRSTLERDLRAI 131 Query: 116 KQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKD---------------PFLIPLA 160 K+ + S G I E+ + + ++ L Sbjct: 132 KREVSKFGLSVSSTVNGIAIVGNEQDKRNYASRIISNYWRESIKANRLVVHLPQDFDNLI 191 Query: 161 GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYA--LRNQLTDEWPQYPGDEIKQIV 218 G + + SL++ I +R Q + P + Sbjct: 192 GSETLRTAQAVLSELQRVTKIEFTEYQYQSLLIHICISTVRIQNAEYLPTWSSASQALSP 251 Query: 219 EHSGLFLGDNAVRTLTGLIEKQHQQAQVISA-------------DNVQGLLQRVPGIA-- 263 E S L + +Q I A V L + Sbjct: 252 ETSILTRLLEEAFNIQVPKSEQEYLNIHILAAKQSKLTPDDFKGQVVNRRLLNIADFLKT 311 Query: 264 SLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 ++ I D QL+ ++T HL + + + + +P AF+++ L ++ Sbjct: 312 NIQIYDDQLINDLTIHLGPAMHRFQVGLQASNPYTSEIMRLYPQAFELAFDLSRKLDDRY 371 Query: 324 DIPL--FDSDLIGLYFACALERH------QNERQPIILLSDQNAIATINQLAIERDVLNC 375 + + + + L+F +ER N+ ++ S A + ++ Sbjct: 372 LVTVDKNEIAYLALHFQSFMERTTKATVSNNKINVAVICSTGLGTARLLTQRLKASF-AD 430 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLD-DAVNNYITVKNIITAAGIEQIKHFLAT 434 ++ I R LS A + + +II+ L V + + + + Sbjct: 431 KINITRVLSVPNAFKAKFVEDMIISTIPLELPGQKVVVIKPLFEPKEERLVAKEITNIED 490 Query: 435 AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE 494 R Q + + + + I LV + A+ IARE Sbjct: 491 RRTRNQNSFLSLMSPTRILVSSKHLERDDAIKMIGQLLVDRDLAKIGVAESAIAREEVAS 550 Query: 495 NLI-VNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKI--- 550 LI +++A+PH SE ++ + V + V A + Sbjct: 551 TLIRQDQVAMPHAQSEYIKKSGITLLVATHGVTWGDGEAKFVFFIGLNQHAIKNTNLDAV 610 Query: 551 ---FSYLASILCQHPAEIIAGLTGYE----AFMELLHK 581 F+ L S ++A + ++ K Sbjct: 611 YHRFNQLVS--SDDALSLLAKANNPKAIWHQLIDFFQK 646 >UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQ92_CLOB8 Length = 641 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 93/628 (14%), Positives = 201/628 (32%), Gaps = 51/628 (8%) Query: 4 ERQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 R +I+ L+E+ + +A++ VS +T+ D+ LN L G A I Y++ Sbjct: 8 NRSTRILKLIERRHSISVDAIAEKFEVSSKTVKNDVKELNSLLKGSALIDNKQGI-YKIY 66 Query: 63 IFERRSFFQLLQKHDNDD------------RLLALLLLNTFTPRAQLASALNLPETWVAE 110 I + F ++ N L L+ LA +N+ T V Sbjct: 67 IIDNSKFEEIKTNIYNQKEFLNSPQRRMAFILYKLMNSEEPYLTDDLACEMNVGRTTVIS 126 Query: 111 RLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK--------DPFLIPLAG 161 L ++++ + + G + TE L+ L + D +I L Sbjct: 127 DLKKMREILNNYDLKIIGKTNNGLALKGTELNIRFLVLENLYEMIYGEYELDEDVIDLVK 186 Query: 162 ITRDNLQHLSTACDNQHRWPLMQGDYLS--SLILAIYALRNQLTDEWPQYPGDEIKQIVE 219 D Q +T ++ ++ D L I + +L W + I VE Sbjct: 187 EITDQYQFDTTTFESFIHSLVVTLDRLLNGHTINTLSEKYGELLRSWEFTLVNTISDAVE 246 Query: 220 HSGLFLGDNAVRTLTGLIE------------KQHQQAQVISADNVQGLLQRVPGIASLNI 267 R L H + ++ V +L+R+ LNI Sbjct: 247 KRLTISIPIKERIFLALPIIGMNTPTNIEGISPHVEITEEVSNLVNHILERIKYDMGLNI 306 Query: 268 IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPL 327 ++++ H+ + + ++ ++ + A+ M+ ++ + LD+ + Sbjct: 307 TLDDILKDFVYHMAFLVNRLKYGVHIHNPIVDEIRKKYKVAYKMAELARDVIEKSLDVKM 366 Query: 328 FDSD--LIGLYFACALERHQNERQPI----ILLSDQNAIATINQLAIERDVLNCRVIIAR 381 + I YF + Q E+ I ++ A + ++ VI Sbjct: 367 TQDEVGFIAAYFGVFISEQQIEKSKIYKVAVICGTGRVTARLVASQLKGIFDANTVIDLY 426 Query: 382 SLS-ELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQ 440 S S I ++ +L +++ V + + + ++ + Sbjct: 427 SDSTVTSEILDKYNLVLSTVQANFKTTATVIYLEKIFDEEALKKRIKSIKYIDKLDMPSM 486 Query: 441 PERF----FSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENL 496 + S+ + L ++ ++ +RI RE + + Sbjct: 487 QGMDSILLSILDEDTFFILDNQLSYLENVDHMIDNLYSKGYVDDGFKERIRKREEKSTMV 546 Query: 497 IVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA--ADARHELKIFSYL 554 +A PH + + + + NN+ L+ D +KI+ + Sbjct: 547 FNESIAFPHTINYENDEIVVSLGIIPEKAGENNQRKLVFLVGLPEQTKDDTLLVKIYDEI 606 Query: 555 ASILCQHP-AEIIAGLTGYEAFMELLHK 581 +I E ++ + Y+ + K Sbjct: 607 IAIANDKNTIEALSKVKSYKELILHFTK 634 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 77/272 (28%), Gaps = 17/272 (6%) Query: 71 QLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPG 130 + + R+L L+ +A + V + L + + + ++ G Sbjct: 2 KYFYTENRSTRILKLIERRHSISVDAIAEKFEVSSKTVKNDVKELNSLLKGSALIDNKQG 61 Query: 131 LGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSS 190 + K + N+ + FL L L + + P + D Sbjct: 62 IYKIYIIDNSKFEEIKTNIYNQKEFLNSPQRRMAFILYKLMNSEE-----PYLTDDLACE 116 Query: 191 LILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD 250 + + + + L ++K I + + + L+ + + + Sbjct: 117 MNVGRTTVISDLKKMREILNNYDLKIIGKTNNGLALKGTELNIRFLVLENLYEMIYGEYE 176 Query: 251 NVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA-- 308 + ++ V I D E+ L+ L + N L + Sbjct: 177 LDEDVIDLVKEITDQYQFDTTTFESFIHSLVVTLDRLLNGHTI-----NTLSEKYGELLR 231 Query: 309 ---FDMSLHFITLLREQLDIPLFDSD--LIGL 335 F + + ++L I + + + L Sbjct: 232 SWEFTLVNTISDAVEKRLTISIPIKERIFLAL 263 >UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EN85_OCEIH Length = 696 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 101/683 (14%), Positives = 231/683 (33%), Gaps = 108/683 (15%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG---- 55 L+ R+ I+ +L + + + E+A Q VS RTI R+I + L Sbjct: 3 LSSRERHILKILLEAEKHMSVKEIADQLDVSVRTIHREIKKIEKVLGDYQLNLVKKTGTG 62 Query: 56 --------SAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 + + E S +L ++ L LL LA+ LN+ Sbjct: 63 ISIQGSTENKKVFRQAMEELSSSELTEEERQVILLYTLLQFREPVKLFHLATELNVTIAM 122 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 V++ L +L+ + + L + G G I+ E ++ +L++L+ + ++ Sbjct: 123 VSQDLNKLESQVKSFGLSLIRKKGYGVQIEGDEGRKRSVLSHLISRHIDPFQYVEKLKER 182 Query: 167 LQHLSTACD--NQHRWPLMQGDYLSSLILAIYALRNQL---------------------- 202 +Q + D ++ L+ + L + I +RNQL Sbjct: 183 IQEDVSKSDTISERLLGLVDAEKLDKIEEQIQRMRNQLPYDLADSAYIGLVVHIALAMER 242 Query: 203 ------------------TDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLI------E 238 ++ + + I + E LF+ ++ + +T + E Sbjct: 243 LQKGDIIHFDDEYKEQIKDEQEYKIAAEVIGHLEEAFSLFIPEDEIGYITMHLMGAKLRE 302 Query: 239 KQHQQAQVISADNV---QGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHR 294 Q+ + S D + L++ V ++++ + + + ++T HL + Sbjct: 303 NQNYLLEESSMDIAYKAKELIRSVSNEMNIDVTHNNRFLNDLTTHLKPAVYRLKQQMNIN 362 Query: 295 QSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNER--QPII 352 ++ +K + F++ I + L P + I L+FA + ++ + ++ Sbjct: 363 NPMIDEIKKDYIELFEVVDKAIQHVFPNLAFPDEEIGYIVLHFAATFLQTDSQSNLKVLV 422 Query: 353 LLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNN 412 + S + + ++ + +SL +L +++ + +D + Sbjct: 423 ICSSGIGTSKMLASKLKNTFPEISIANHQSLFDLDKETLAGYDVIVSTVALEDID---RS 479 Query: 413 YITVKNIITAAGIEQIKHFLAT----AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQI 468 Y+ + ++T +IK L + I++Q + + F + + Q+ Sbjct: 480 YVLISPLLTDEEARKIKVELRKSKITSPIKKQQMKSRNGQDDFVAKLYSMQLYSKAMLQL 539 Query: 469 CAQLVAQHHITADE------------------------AQRIIAREGEGENLIV-NRLAI 503 L + + ++++ RE +G I + LA+ Sbjct: 540 INNLTVTNLAKETDMLSYLHLIGKDIEQAKIVTHADVILEKLVEREQQGGLGIPSSELAL 599 Query: 504 PHCWSEQERRFRGFFITLAQPVEVNNEV------INHVLIACAAADARHELKIFSYLASI 557 H SE L QP+ + +L+ L I S+++ + Sbjct: 600 FHTRSEWVPGPYLRVYELEQPIYLKGMDNIPMMIKRILLMLAPQRTESEVLDILSFISGL 659 Query: 558 -LCQHPAEIIAGLTGYEAFMELL 579 + + I E + L Sbjct: 660 FIQEEENIRIVAYGTEEEIQQFL 682 >UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Anaerococcus RepID=C7REJ5_ANAPD Length = 625 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 91/632 (14%), Positives = 212/632 (33%), Gaps = 57/632 (9%) Query: 1 MLNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARI-FASGSA 57 M+ R +I D L + E+ ++ +S +T+ ++I LN + K I + Sbjct: 1 MIETRTKEIFDYLTSDYGFHSSEEIGEELELSSKTVQKEIGILNSFIKDKGAIVESESGK 60 Query: 58 GYQLEIFERRSFFQLLQKH----------------DNDDRLLALLLLNTFTPRAQLASAL 101 GYQ I + F L+ + + L N+F + +LA Sbjct: 61 GYQFRILDEDKFKNFLKHDWFKYAYFHQENPNKDFRIESIMKLFLFSNSFIKQQELADMF 120 Query: 102 NLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + + + + + ++++ + L S+P G I E+ + + N + +DP + Sbjct: 121 YVSLSQINKDIKKVRKLLKAYNIELISKPYYGMKIKGREKDIRLAIRNEIGEDPAIFARD 180 Query: 161 GITRDNLQHLSTACDNQH-RWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEI----- 214 + + D M +L++ IY ++ + DE+ Sbjct: 181 SDEELFTRIQAIIADIDFPESFYMPYANFKNLVVHIYISILRIKEGKYIDLSDELSKRVI 240 Query: 215 ------------KQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI-----SADNVQGLLQ 257 K++ + L ++ + LT + ++ ++ Q ++ Sbjct: 241 SYDEFNIANKVVKELSKKLDLTFPEDEILYLTMHLISKNAVTNYEKVSPEISELAQKMID 300 Query: 258 RVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 + ++ + + L + HL + + + +N++K AF ++ Sbjct: 301 EIYKVSKYDFRSNIDLFFALALHLGPLIERLRYGLTMKNPILNDIKDN-QIAFMLATVAT 359 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI-ILLSDQNAIATINQLAIERDVL 373 + E + D + I L+ A A+E + ++ I ++ N+ A I + IER Sbjct: 360 NPINETYKTRVCDDEIGYIALHIASAMENNTYLKRTILVVCGSGNSSAQIMKTQIERKYK 419 Query: 374 NCRVIIARSLSELVAIR-EEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 I + +L++L + ++ I +S + + V I +I Sbjct: 420 EQ--IDSLTLTDLSKVDLYNLDKFDFIVSSVPIKQKTDTPIVYVDVIFKQKDFMKINDIF 477 Query: 433 ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQR-IIAREG 491 + E S ++ + + + A+ I + + RE Sbjct: 478 N---VDNFTEINRIFDNSILRRDIDIKDMDAALDILSDIVSAKTGIDKGNIKEQYLKREE 534 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIF 551 N +A+PH + + + V+ N++ + + + Sbjct: 535 MAFTSYGN-VALPHILDQVKGESFSIVLIPKNKVKWNDDRVKVIYSLIIGNIRGDLSLYY 593 Query: 552 SYLASILC-QHPAEIIAGLTGYEAFMELLHKG 582 L L + E + F ++ +G Sbjct: 594 DKLGDYLNSEDLIEKSSEAKNIGEFKKIFWEG 625 >UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVY0_ALKMQ Length = 705 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 89/682 (13%), Positives = 202/682 (29%), Gaps = 110/682 (16%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 + R+ I+ L E T +AQ VS RT+LR+++ + L + G Sbjct: 6 MTTRKKDILYRLCKENDYVTISNVAQDLNVSSRTVLRELEEIGKWLEKEGVFLDKKTGVG 65 Query: 59 YQL------------EIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 L I S + LL N L LN+ E Sbjct: 66 IHLPCSLEKKEELLELIEHANSIKIFTPQERQTIIASELLQANEPIKFYYLTKILNVSEG 125 Query: 107 WVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRK---DPFLIPLAGI 162 ++ L +L++ + L +PGLG +I E+ + + NL+ + + L+ Sbjct: 126 TISHDLDKLEEWVDIYNLQLIRKPGLGVYIAGREKHKRRAIINLIYENVEEKQLLSFIQE 185 Query: 163 TRDN---------------------------------------------------LQHLS 171 + HL+ Sbjct: 186 NITKSPEISGSIEIKTRNRLLNLIDKETIRTLEGLIYIAEEEMGYKLADSAYVGLIVHLA 245 Query: 172 TACDNQHR--WPLMQGDYLSS-LILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDN 228 A +M ++L+ + + +L + +I + Sbjct: 246 LAIKRIKNNEIIIMDKEFLNELNQNPEFIIARKLALNLSDFFNIDIHEDEIGYITMHLMG 305 Query: 229 AVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAP 287 + + + +++ I + +L+ + HL + Sbjct: 306 SKNRGNVTKNETSTIGSFELVKLAREMIKIAEAETGSFIGNNEKLLTGLVNHLEPAIKRI 365 Query: 288 VWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ 345 + R + +K +P +S +L + L + +S+ I ++ +E+ + Sbjct: 366 KMKMDIRNPLLQEIKTRYPHLIKVSSKCAKVLEDYLGQKMPESEIAYIAMHLGAVIEKKE 425 Query: 346 ----NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINN 401 + + + + IE++ N V+ S L + E + I + Sbjct: 426 IMPQIRFRVAVACPSGIGTSKLLATRIEKEYDNMHVVGIISSFRLEESWLKQEEIDFIIS 485 Query: 402 SHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPG------------ 449 ++ + I V ++ I + + Sbjct: 486 -TIPIEKSSIPVIKVNPLLLDEDKYHIHQSMKKISKTSIKPKEKRKANVSLKDKLIQMHN 544 Query: 450 ----------SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI-V 498 + E + + + A LV + Q +++RE +G LI Sbjct: 545 YSGAIIEVLDNLFLETYYVEDIEELIHIVSAMLVKEKVGQDKLTQDLLSREKKGGTLISG 604 Query: 499 NRLAIPHCWSEQERRFRGFFITLAQPVEV-----NNEVINHVLIACAAADARH-ELKIFS 552 ++ HC + + + L +P+ E I+ V++ A +++ L++ S Sbjct: 605 KGFSLLHCRTSSVEKLYFGAVRLIKPIYYLNSRGEEEAIDLVIVMIAPENSKQAYLEVIS 664 Query: 553 YLASILCQHPAEIIAGLTGYEA 574 ++ ++ P ++ + Sbjct: 665 EVSKMIIDKPNFLVLLRGNAKE 686 >UniRef50_D0BMI3 PRD domain/PTS system IIA domain protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BMI3_9LACT Length = 627 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 83/629 (13%), Positives = 214/629 (34%), Gaps = 56/629 (8%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML +RQLK+V++L + +T +A GVS RT+ ++ + +I G Sbjct: 1 MLTKRQLKLVEILSNLETYQTVARVANCLGVSERTLHTELKVIES---EGFKIDRKRGLG 57 Query: 59 YQLEIFERR----SFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 +L+ + F K+ + + ++ LA T + + Sbjct: 58 IRLKELNQEYDISDFEIDNIKNRRIEIMKKIIFDQQSITFFGLAEEYFTSTTSIQNDIRV 117 Query: 115 LKQRYERTCCLAS-RPGLGHFIDE--------------------------TEEKRVILLA 147 + R + LG +D+ + +++LL+ Sbjct: 118 ISNILFRDTNVNLVSDYLGTRLDKCSTEEMIKVMVNFNSFIISEMEDRNLDDNNKLVLLS 177 Query: 148 NLLRKDPFLI---PLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQL-- 202 +D + L + N+ +S A L+ Y I + N + Sbjct: 178 EYYSRDVVFVCNSILYSFVKKNVNAISDAYIEYFLRYLIVLVYQLKNDRHITLVENSVDY 237 Query: 203 --TDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQA---QVISADNVQGLLQ 257 + + + + V+ L+ L+ + + + + + L++ Sbjct: 238 FQHSFYIDSAVKILHKASLRLNFKYTNEDVQYLSLLLLNYKFEELPQEKVDNNFINDLVK 297 Query: 258 RVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 +V ++N D L++ + H+ L+ + + +K + +++ + Sbjct: 298 QVSKAMNINFFKDDVLLKQLHQHIPAMLSRLKYQTVVKNPFSEQIKLEYSITYNILWIIL 357 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLN 374 + Q + + + + LYF ++E+ + R+ +++ + + I+ + Sbjct: 358 EEILPQNISKINEDENAFLTLYFQLSIEKLKKGRKILVICPTGIVTSELLINKIKTVSPS 417 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE--QIKHFL 432 I S+SE + L++ + + N V +I+ ++ K Sbjct: 418 FDRIEIASISEAFELDLNSYDLILST---VKIPKKLKNLYFVSPLISDEDLKLLFNKSKS 474 Query: 433 ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGE 492 + N + +++ + +L+ + ++ + RE Sbjct: 475 LNKKKTNFSCLKEYIKQDLIFVNEMMNNRENLFQMTGKKLIEKGYVNDFFLTSLSEREVL 534 Query: 493 GENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHE-LKIF 551 G + +A+PH ++ R+ + L + + + IN V + A + H +I Sbjct: 535 GGTDLPIGVAVPHGKTKDVRKSFITIVKLDKKIHWKDYKINLVFMIGIAQEDIHLTKQII 594 Query: 552 SYLASIL-CQHPAEIIAGLTGYEAFMELL 579 S + +++ + + + + ++L Sbjct: 595 SNIYNLISDEQILTQLRQVKTSKEVEDIL 623 >UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQV6_ALIAD Length = 674 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 101/668 (15%), Positives = 201/668 (30%), Gaps = 97/668 (14%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 L +RQ ++ L ++P P E A++ VS RT+ RD+ + L S Sbjct: 5 LTDRQKLLLFELVRRPEGVDPSEAARRLDVSRRTLQRDLRAVAGWLRPFRARIESQGGRL 64 Query: 60 QLEI--FERRSFFQLL-----------QKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 L E L + L LL A L L+ Sbjct: 65 CLLASPQELGRIEAALGPVTARSAAVTPRQRAALLALWLLAEPGPLKLAYLGKVLDAAPA 124 Query: 107 WVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITR- 164 ++ L L R L R G G ++ +E R +A+++ + LA +T Sbjct: 125 SLSGDLNDLAPWLRARHLTLVRRQGFGVLVEGSEVARREAMADIVYEQISPYQLARMTTR 184 Query: 165 -------------------------DNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALR 199 D ++ + A + +L ++I + A R Sbjct: 185 EGDLSHPVARWLVQFVQDPVLRAVADVVEAVLGAAEPPVEEADRFEVWLYAVIQCLRAAR 244 Query: 200 NQLTDEW----------PQYPGDEIKQIVEHSGLFLG--DNAVRTLTGLIEKQHQQAQVI 247 L + + + + +GL + +R + + + Sbjct: 245 RGLVRGTDLDEGARPGDVALAKELLSSVAKATGLPALSTEPEIRYMARHLAGLRVRLDDD 304 Query: 248 S---------ADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSS 297 D ++ V I L D LV + HL L R Sbjct: 305 FRLLPSNVTALDLAHRFVRAVEDITRLPFASDHLLVSGLAQHLAPALDRVRAGLPIRNPL 364 Query: 298 MNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERH--QNERQPIIL 353 + +KA +P F + + + L D + + ++ + ER + + + +I+ Sbjct: 365 LETVKARYPELFAAAESASREVFAPHGLRLPDEEIGFLAMHLGASRERRLAEEKWRAVIV 424 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNY 413 + A + + +++ V S A + +L L +A Sbjct: 425 CPHGLSSARLLASRVRKELPEISVQEVASAK--SAAHLNADLVLSTV----SLPEADVPV 478 Query: 414 ITVKNIITAAGIEQIKHFLATAFIRQQPERF------------FSAPGSFHYSNVRGESW 461 + V +T + ++ LA + S S++R ++ Sbjct: 479 VVVSPFLTEEDLRAVRFVLAKLERPARTSPEPGEALPGASTWALRLASSARTSSIRAQTM 538 Query: 462 QHITRQICAQLVAQHHITA--DEAQRIIAREGEGENLI-VNRLAIPHCWSEQERRFRGFF 518 + + + LV Q + I RE G ++ +LA+ H ++ Sbjct: 539 DDVIQLVGLDLVRQGRASDAGPIVAAIERRERLGSVVLPGRQLAVLHARTDGIDGPFVGV 598 Query: 519 ITLAQPVEV-----NNEVINHVLIACAA-ADARHELKIFSYLASILCQ-HPAEIIAGLTG 571 L +P+ +E + VL+ A + + +++ L + Sbjct: 599 YRLERPM-WTRGVGEDEPVAVVLVLLARVQEDPGAIDGLGRISAALVESEALVEALKSAD 657 Query: 572 YEAFMELL 579 E L Sbjct: 658 EEEVRRRL 665 >UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Clostridium difficile RepID=C9XLJ8_CLODC Length = 679 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 84/645 (13%), Positives = 209/645 (32%), Gaps = 65/645 (10%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTL-NGKARIFASGSAGY 59 ++ + KI+ + ++ + +A + V+ R++ I LN L N A I GY Sbjct: 32 IDRKIFKILIMCSKKEFVSINSIANELNVTTRSVRTYIKQLNKDLGNDIAVIKYIKGQGY 91 Query: 60 QLEIFERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 +LEI + + +++ + + L L+ L+ F LA + + T Sbjct: 92 KLEIKDEQILNKIIDMNRKNVFSLNSKEDRVEFILNYLIELDGFITLDSLADEMCVGRTT 151 Query: 108 VAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 + +++ L + G ++ E + + N L K+ Sbjct: 152 LVNDFQYVEKVLASYNLNLIKKQNTGMKLNGNELDIRLFILNQLYKNSRKDFSNSKYFKG 211 Query: 167 LQHLSTACDNQHRWPLMQG-------DYLSSLILAIYALRNQLTDE---------WPQYP 210 ++ + L + + L +I I L ++ +E + Sbjct: 212 IKKEEIINLEEKLLTLFKENNFYVTDEMLREVINYIVVLVYRVKEEKKVKDYDVKFDLLK 271 Query: 211 GDEIKQIVEHSGLFLGDNAVRTLT------------------GLIEKQHQQAQVISADNV 252 + I + TL + + + Sbjct: 272 SYDEYFIAREIKHIISGMFECTLNDEEIIYLTIPLVSGNAPASECALNSSRISKNIDELM 331 Query: 253 QGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 + + ++ + I + +L + HL L ++ + + + +K + F ++ Sbjct: 332 ENIFNQIYVDMGIFINEDELRVGLGYHLSFTLNRLLFNIKLKNVLLEEIKQNYILPFKLA 391 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE----RQPIILLSDQNAIATINQL 366 ++ ++ ++ + + + I ++F+ LER+ + ++ I+ S A + ++ Sbjct: 392 QIAGKVIEKKYNLEVSEDEIGYIAIHFSGYLERNSSRFYSIKKIAIICSTGLGTAKLLKI 451 Query: 367 AIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIE 426 +E+ + N I S L I + ++ + E Sbjct: 452 RVEKLIGNNPKIDTLSSFNLRNINLDEYDIVFTTIDLDTSNINTIVLKINTIFDENKLRE 511 Query: 427 QIKHFL-----ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 Q+K L + + + ++ ++ L+ I Sbjct: 512 QLKTVLCLREGNIDTTNSTNLLINNLLDEDKFMILNEKTILASLEKMMDHLMDLGCIDDK 571 Query: 482 EAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAA 541 + I+ RE + + L PH +E+ +F L +P+E N I +L+ Sbjct: 572 FRKNIVNREEKSPTVFDKGLLFPHSVNEKSDKFLMAVGILEEPIEYANRSIKIILMTMFP 631 Query: 542 ADARHELKIFSYLASILCQ-----HPAEIIAGLTGYEAFMELLHK 581 + + + + + + + I+ + F ++L K Sbjct: 632 CENKIDSDLLVKIYEEVLKIGQDVKLTNKISKCRTFLEFKKVLLK 676 >UniRef50_C8ZX11 Predicted protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZX11_ENTGA Length = 661 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 84/616 (13%), Positives = 208/616 (33%), Gaps = 61/616 (9%) Query: 7 LKIVDLLEQQPRT-PGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE-IF 64 +I+ L++ P T ++A+ G S ++I R I ++ L G + + Sbjct: 11 REILRFLQKNPETSIKKIAEYVGKSEKSIRRKIAQIDDLLVENKLGRIDTKPGRGILFVL 70 Query: 65 ERRSFFQLLQ-----------KHDNDDRLLALLLL---NTFTPRAQLASALNLPETWVAE 110 QLL+ +++ L+ LLL N F + +LA L + + Sbjct: 71 YPNKQNQLLKHFSDFSIPEGISQNDEWTLICLLLERASNHFITQVELAEKLYVSIPTFRK 130 Query: 111 RLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLL---RKDPFLIPLA----GI 162 + +K+ + + + PG G + E + + + + + + + L GI Sbjct: 131 LMSHVKEWFADHHIMIQTIPGKGLTLVGDEYSKRVAIRDAILLQEDEKQTVVLQRFARGI 190 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYAL-RNQLTDEWPQYPGDEIKQIVEHS 221 + + + + ++ + ++ I+ I ++ R + P E + E+S Sbjct: 191 SVEEISEIIRKAESDWKIKFSNTSFIKIRIMLILSIGRFSYASDMPTIDDFEREYTNEYS 250 Query: 222 GLFLG---------------DNAVRTLTGLIEKQ------------HQQAQVISADNVQG 254 + D + T L+ + Q + V Sbjct: 251 FVETLYRGLEKRGFGTFNEVDKRILTAEILVSNKLRWKDSAALTNLKNQYDNDLLEFVHT 310 Query: 255 LLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 ++ + I + D L E +T HL + + ++ +LK + F Sbjct: 311 IISSISEILQQPLTEDKILEEELTNHLRSAIFRMKYGHKNSSELTRDLKKLYGRVFLSVW 370 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERD 371 L + ++ L + + I LY A+ R+Q++ ++ + + I+++ Sbjct: 371 STSQLFEDYYNVQLTEDEIAYIVLYIEAAILRNQSQVDAYLVTDRGRSQSLFATEYIKKN 430 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 + + I E+ + R+++ L + + ++ + K+++ Sbjct: 431 IPEIKEIHIIREEEIDSTRKDV-LYLTMVPVDSVTAVPISYLPSNKDLVNIRTALSRWGI 489 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + + + N + + + + QL + ++ + + RE Sbjct: 490 VPGSISIFSDASKPLLDPRLIFVNQTYTNKEEVVTFLSNQLESLGFVSPNFYLTVWKREQ 549 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIAC----AAADARH 546 + I + AIPH + + + L +P+ +E+++ V + + R Sbjct: 550 KTTTCIGHHTAIPHGSMTEVFEPKVAIMVLKEPILWYEDEMVDTVFLLATRMQTPIEIRQ 609 Query: 547 ELKIFSYLASILCQHP 562 + L Sbjct: 610 NKHFYRELTDFTENDS 625 >UniRef50_B0NYU6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYU6_9CLOT Length = 640 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 93/628 (14%), Positives = 201/628 (32%), Gaps = 52/628 (8%) Query: 4 ERQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLE 62 R I+ +E Q + LA + VS +TI DI LN L G A I + +L Sbjct: 9 NRIAVILRNIEMQSVCSVESLAAKLDVSQKTIRNDIKELNCLLGGYACIGNNKGI-CKLI 67 Query: 63 IFERRSFFQLLQKHDNDDRLL------------ALLLLNTFTPRAQLASALNLPETWVAE 110 +F + F ++ K + L L+ L+ + + T Sbjct: 68 VFAPKGFTEIRNKIYKQEDLFNSSHTRMAYMFWQLMHAEEPYLTDDLSEEMKVARTTTIS 127 Query: 111 RLPRLKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGITRDNLQ 168 L RL++ E+ + + G + E K R+ +L N+ + PL I R+ L Sbjct: 128 DLNRLRKAIEKYDLKIKGKANTGLALCGDEYKIRLFILENIYEQLYLNFPLGQIIREKLY 187 Query: 169 H---------------------LSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWP 207 + ++ H ++ Y + Y + ++ +E Sbjct: 188 DFQERLSMDALGFGFFYRFFVVMIQRMESGHTIKKLEPKYEELYGSSAYMIVDEFLNEIE 247 Query: 208 QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNI 267 Q G +I + +Q AD + +L R+ ++ + Sbjct: 248 QVKGYKISKEERLFLSISVAGMRTPANTAEIEQKISISEGVADLIIEILDRIKAELNVTV 307 Query: 268 IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPL 327 + +L ++ H+ + + +++ K + A+ M+ +L E++ I + Sbjct: 308 VANELFDDFVYHVFFMINRLKYGFHIYNPMVDDFKNKYSVAYKMAEIAKGVLEERVGIEM 367 Query: 328 FDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSE 385 + + + YF L + E + + + I +L + V Sbjct: 368 TEDEMGFLAAYFGVFLLEQEPEEKRCKIAIVCGSGKIIGRLIENQLKKVFDVEPEFEFFY 427 Query: 386 LVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL-------ATAFIR 438 + + I + L D I + + I++ + T Sbjct: 428 GIFDENRKDDFDYIVTTTELHMDTKTPVIFMDEVFDREYIQRKFENMRYLSEAGRTIRKG 487 Query: 439 QQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV 498 + + + S+ ++ L Q + A AQR+ RE ++ Sbjct: 488 IDSLFMNLLDETRFFVLDQESSYDENVDRMARALTNQGELDAGFAQRVREREKYSTMVLD 547 Query: 499 NRLAIPHCWSEQERRFRGFFITLAQPVEVNNE-VINHVLIACAA---ADARHELKIFSYL 554 +A PH + ++ + I +++ D ++++ + Sbjct: 548 QNIAFPHTK-NMLSKLTLAMGVFPDMLKDDKYGNIRIIILLGIPESMEDDTVLVRLYDDI 606 Query: 555 ASILCQ-HPAEIIAGLTGYEAFMELLHK 581 SI + I + Y F+ + + Sbjct: 607 LSIGKKPDVIPKIQKMESYREFLLYIAE 634 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/314 (8%), Positives = 84/314 (26%), Gaps = 6/314 (1%) Query: 69 FFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASR 128 QL + +L + + + LA+ L++ + + + L C+ + Sbjct: 1 MKQLFNNENRIAVILRNIEMQSVCSVESLAAKLDVSQKTIRNDIKELNCLLGGYACIGNN 60 Query: 129 PGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYL 188 G+ I + + + +++ L A + + + Sbjct: 61 KGICKLIVFAPKGFTEIRNKIYKQEDLFNSSHTRMAYMFWQLMHA--EEPYLTDDLSEEM 118 Query: 189 SSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS 248 + N+L +Y + L + +R + Sbjct: 119 KVARTTTISDLNRLRKAIEKYDLKIKGKANTGLALCGDEYKIRLFILENIYEQLYLNFPL 178 Query: 249 ADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 ++ L S++ + + + ++ + +A Sbjct: 179 GQIIREKLYDFQERLSMDALGFGFFYRFF---VVMIQRMESGHTIKKLEPKYEELYGSSA 235 Query: 309 FDMSLHFITLLREQLDIPLFDSDLIGLYF-ACALERHQNERQPIILLSDQNAIATINQLA 367 + + F+ + + + + + L + N + +S +A + Sbjct: 236 YMIVDEFLNEIEQVKGYKISKEERLFLSISVAGMRTPANTAEIEQKISISEGVADLIIEI 295 Query: 368 IERDVLNCRVIIAR 381 ++R V + Sbjct: 296 LDRIKAELNVTVVA 309 >UniRef50_C3RJI5 Transcriptional antiterminator n=2 Tax=Bacteria RepID=C3RJI5_9MOLU Length = 638 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 78/634 (12%), Positives = 185/634 (29%), Gaps = 58/634 (9%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + +Q ++++ L T L++ +S RTI I LN + +S + GY Sbjct: 1 MRRKQEELINYLYTHNEKVTANILSKALNLSIRTIKSYIAELN---MNYPSLISSSNRGY 57 Query: 60 QLEIFERRSFFQLLQKHDNDD-------RLLALLLLNTFTPRAQLASALNLPETWVAERL 112 ++ + S Q D LL + L L + + + + + Sbjct: 58 VIDKVKANSLLQYKDDIPQDYESRCIYIIKKTLLEKQDYIDIFDLCEELFISYSTLKKDI 117 Query: 113 PRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDP--FLIPLAGITRDNLQH- 169 ++ + S + +E+ + L+++++ ++ + L + + Sbjct: 118 YKMNTSFANFKITFSSENNKLHVGGSEQNKRKLISHVMSEEVSGNFLNLTLLQESFPDYD 177 Query: 170 LSTACDNQHRWPLMQGDYLSSL-----ILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLF 224 L AC YL+ IL + + +++ +E+ Q+ + Sbjct: 178 LDDACTLIKDICKQHHYYLNDFSCVNFILHVTIMVSRINHGNHIINNNELIQVTNKNDEK 237 Query: 225 LGDNAVRTLTGLIEKQHQ---------------------------QAQVISADNVQGLLQ 257 + L + + +++ Sbjct: 238 IAKELCLALEQVFNVSFNSSEILEIYILFKNNANYINNENENVSLLVSDEIIQITKNIIK 297 Query: 258 RVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 V +N+ + HL + + ++++K + P +D+S Sbjct: 298 NVDEHFFINLDSDNFITPFMLHLKNLKNRLIKNNLLKNPMLDSIKISCPTIYDISTFIAY 357 Query: 318 LLREQLDIPLFDSD--LIGLYFACALERHQNERQPI---ILLSDQNAIATINQLAIERDV 372 L + + + I L+ +ER + E + +L + I + I D Sbjct: 358 QLTLSFHENVNEDEIAFIALHVGTEIERQKKEETKVSCLLLCPEYLNITSTLHKKIMMDF 417 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 + I E + + L+ + I + Sbjct: 418 GDQLTIQKSISFENEILGNNFDLLITTVPVLESTNYFTVLLPPFPMSYEKNKILDAIIRI 477 Query: 433 ATAFIRQQPER--FFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE 490 Q F YS S + ++ +++ ++ + + I RE Sbjct: 478 ENTKKSQILTNNLNFYFNEKLFYSMNEDISKSAVINELAERMINLGYVEENFKEEIWKRE 537 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV-INHVLIACAAADARHELK 549 +N +AIPH + + + ++ N+ +N V + Sbjct: 538 TASSTAFMN-IAIPHPMKMSAYKTSIGVVISHKGIDWGNQHFVNVVFMIAFNKIDNKHFH 596 Query: 550 IFSYLASILCQHPAE--IIAGLTGYEAFMELLHK 581 +L P I + F +++ K Sbjct: 597 ALYESLVLLFNEPIVISEIKKCKNFNDFKDIVIK 630 >UniRef50_A5ZAB6 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAB6_9FIRM Length = 631 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 80/628 (12%), Positives = 198/628 (31%), Gaps = 54/628 (8%) Query: 3 NERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 +RQ KI+ + T L+ VS RTI ++ +N L+ + S + GY+ Sbjct: 5 TDRQKKIIKEIHNSNTFITGKSLSLILNVSLRTIQSEVSAINKVLH----LILSTNRGYK 60 Query: 61 LE--IFERRSFFQLLQKHDNDDRLLAL-LLLNTFTPRAQLASALNLPETWVAERLPRLKQ 117 ++ +++ F + ++ + + ++ N LA L + T + + ++ Sbjct: 61 IDDNLYKTMDFTAIEKEQNLEHIIVKKVFFHNPHYNIDDLAEVLYISTTTLEKYFKKIND 120 Query: 118 RYERTCCLASRPGLGHFIDETEEKRVILLANLLRKD--------PFLIPLAGITRDNLQH 169 R F+ E + L ++ + L + Sbjct: 121 TLSDFDLKIVRTNNTVFVSGNELNKRKYLNKIIFDEINPAFNSIDNLNNYFEGIDVDKIK 180 Query: 170 LSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ-----------------YPGD 212 + + Y +++I+ I ++ + + Sbjct: 181 IIILNSINKYHYYVDNAYYNNIIVNITIALYRMRTDHYVSEPLRNISDKAETVESKIATE 240 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ------------QAQVISADNVQGLLQRVP 260 Q H + ++ + ++ L+E + + ++ +L V Sbjct: 241 ICTQYSAHCNIDPSEDDIFYISSLLEGIIKPISNDAQSVSQDILTSDFIEEIREILLNVF 300 Query: 261 GIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 L I + + + H+ + I +NN+K P +D+S+ L Sbjct: 301 SSYMLEINFDEYLYSFALHIHGLIKRANSIQSSGNDFLNNIKKNCPFIYDVSVSIAQKLN 360 Query: 321 EQLDIPL--FDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVI 378 ++ +I + + I ++ +E ++ + +L + IN ++ + N + Sbjct: 361 KKYNISIADSEIGYISIHIGYLIESSNSDSDKVSVLLLCHDYHHINSNIEKKLLDNYQNF 420 Query: 379 IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL-----A 433 I L I + + L+ I V T + + + Sbjct: 421 ITLKLFTTDNRSALINAYSDLIVTTKPLNLIGKEVIVVSPFFTMMDQINVDNAIHKCLEN 480 Query: 434 TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 I++ + + + + + R + ++ + ++ RE Sbjct: 481 KQKIKRNNILSSFFDEKLFFKSNDFGNKEDVIRFLGQNVIDYGLCEEGFVESVLEREQLS 540 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY 553 + AIPH +T ++ ++ VI+ VL+ + R + Sbjct: 541 STCFFDTFAIPHALDMNATHTMICVLTSESGIQWDDHVIHIVLMLAVQQNDRKKFMELYN 600 Query: 554 LASILCQHPAEIIAGLTGYEAFMELLHK 581 + P E + L + M+ L++ Sbjct: 601 GIVQTLEKP-EKVNKLVLSDNLMDFLNQ 627 >UniRef50_B1CAC3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAC3_9FIRM Length = 650 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 90/645 (13%), Positives = 218/645 (33%), Gaps = 73/645 (11%) Query: 10 VDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKA-RIFASGSAGYQLEIFERRS 68 + + + T EL+ + GVS RTI D+ LN+ L ++ + GY L+ + Sbjct: 4 LLISSEGYITGPELSNKLGVSDRTIRNDVGILNYVLEQYNCQVISKRGKGYILKSENKEL 63 Query: 69 FFQLL---------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRY 119 +L +K D ++ LL ++ +L + T + + +K+ Sbjct: 64 LNSILSQYSGYKNQKKERVYDIIIMLLCEKNNVDLYEIEDSLFISRTTLENEIQNIKEML 123 Query: 120 ERTC--CLASRPGLGHFIDETEEKRVILLAN-------------LLRKDPFLIPLAGITR 164 + R + E LL ++ F + R Sbjct: 124 KSFYPSIDLRREKGKIELIGNETTLRFLLNEILMLKYDSKKQKLFIQNKYFKKESFEVIR 183 Query: 165 DNLQHLSTACD----------------------NQHRWPLMQGDYLSSLILAIYALRNQL 202 DN+ ++ ++ + D ++ +Y + +L Sbjct: 184 DNVSKIALKYHLDIDDSAVADIAVYLLIAKVRLKLNKRIIKLKDEVNKDNDILYKIGEEL 243 Query: 203 TDEWPQYPGDEIKQIVEHSGLFLGDNAVRT---LTGLIEKQHQQAQVISADNVQGLLQRV 259 E + + + E + + + + V L E+ +Q + V+ L+ + Sbjct: 244 YKEILEDKSENDYKQNEINQIAVKLSFVNLFTPLNLTREEAKRQMPSQIIEIVESLISNI 303 Query: 260 PGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 L++ D +L + H+ + + ++ +K + F++SLH + Sbjct: 304 KDDYDLDLSMDDELFMGLIFHVRALINRVKYQQLVESPILDMIKKQYTFIFELSLHIYEI 363 Query: 319 LREQLDIPLFDSD--LIGLYFACALERHQNER-----QPIILLSDQNAIATINQLAIERD 371 ++ L I L +S+ I + A A+ER + + I+ + + ++ Sbjct: 364 FKKVLGIKLTESELSYIAAHIAAAIERMRLHYGKAGVKIAIISHMAPSYTKLLVSNLKNI 423 Query: 372 VL-NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 N +I + + ++ EE +++ L+ N +++ + +QI Sbjct: 424 FSQNIEIIGSYPVYKIDEALEENPSIILSTCKIENLNIPANIKHMEISLVLSNEEQQILA 483 Query: 431 FLATAFIRQQPERFFSA------------PGSFHYSNVRGESWQHITRQICAQLVAQHHI 478 L + + S + N+ + + I ++ + ++ Sbjct: 484 SLIEDVRSEFVYKKSSKAENIDESIINKFNKDLFFPNLNVNTKEEALSLISNVMLLKGYV 543 Query: 479 TADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA 538 D +++ RE ++ N +AIPH + I+L + + + + + + Sbjct: 544 NNDFLDKVLEREKLSNTVLDNMIAIPHPVEACANKTIIGVISLPKAITWGDYKVKLIFVL 603 Query: 539 CAAADARHELKIFSYLASILCQHPAE--IIAGLTGYEAFMELLHK 581 D + ++ S L + + ++ F+E + K Sbjct: 604 AVRKDEKAYMRNVFKFISRLMDDKNKVDKLVNSKTFKEFIESVKK 648 >UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E24 Length = 691 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 101/684 (14%), Positives = 220/684 (32%), Gaps = 117/684 (17%) Query: 10 VDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSF 69 + L ++ T ++A++ +S RT+ R++ + L+ + LE+ + Sbjct: 1 MLLHREESITVEQIAKELDISPRTVHRELKAIETILDSYRLKLRKKTR-VGLELEGSKEH 59 Query: 70 FQLLQK-------------HDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLK 116 L + L LL + L++ L + V+ L +L Sbjct: 60 KDKLTQALLFTPVQEYTVPERKVYLLSMLLESSEPIKLFTLSNELKVTAATVSNDLNQLA 119 Query: 117 QRYERT-CCLASRPGLGHFIDETEEKRVILLANLL---RKDPFLIPLAG----------- 161 +++ L R G G + +EE + + +L+ D L L Sbjct: 120 DWFKQYKLRLIRRRGYGILLTGSEEAKRKAILSLIIGHFTDAELFMLIQGYPALRDRQAR 179 Query: 162 -----------ITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIY-------------- 196 I RD L+ + +A + + S L +Y Sbjct: 180 ISPVSNKLLDLIARDKLEMIDSALGEIDKELMAPFADTSYLYFMVYLALMLKRLELGQEL 239 Query: 197 ---ALRNQLTDEWPQYPGDEIK--QIVEHSGLFLGDNAVRTLTGLI---------EKQHQ 242 A + P+Y E I E G+ L ++ T I E+ Sbjct: 240 SLDATSKEAAKRAPEYNVAEKIFRHIAETFGVELPEDEACGFTPYIKSGKLRKPSEEWID 299 Query: 243 QAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 + + V L+ ++ D L++ + HL + + ++ + Sbjct: 300 AENIELSTLVYELVSYCEQKLHADLLSDRNLMQGLVSHLEPSIYRIRENIIVQNPYLDQI 359 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERH---QNERQPIILLSDQN 358 ++ + + + + + Q+ +P + + ++ A +L+ + ++ + Sbjct: 360 RSDYAHVYQIVEEAVHQVMPQVKVPDDEIGFLVMHIAASLDNKHLLHKTFKGLVFCASGI 419 Query: 359 AIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKN 418 + + I + +V+ S+ EL I L+I L + Y+ V Sbjct: 420 GTSKMLATRIRNKIPELQVLKNVSIFELDQIDPGAFDLIIST---VKLPIDASQYVLVSP 476 Query: 419 IITAAGIEQIKHFLATAFIRQQPER---------------------------------FF 445 ++T +E I+ L ++ ++ Sbjct: 477 LLTDGEVEMIRRLLEQKEAVRKGKKEKVREGLSDKEMRATVKSLQVMEQGKAYLEESLHL 536 Query: 446 SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEA--QRIIAREGEGENLI-VNRLA 502 S Y V G S + + +IC L + + EA R++ RE +G I ++LA Sbjct: 537 SRQFRLEYLRVNGRSLEEVLLEICTGLSKEGVLGDAEAVTARLLEREKQGGLGIPGSKLA 596 Query: 503 IPHCWSEQERRFRGFFITLAQP---VEVNNEVI---NHVLIACAAADARHELKIFSYLAS 556 HC E L++ + ++ + I +L+ +L++ S+++S Sbjct: 597 FFHCRHESVYTTSFTMYDLSEEKNLIAMDQQWIGISRLMLLLSPVKVKEEKLEVLSFVSS 656 Query: 557 ILCQHPAEIIAGLTGYEAFMELLH 580 + + I L Sbjct: 657 LFVEREPVDIFSSGNQARLNAYLS 680 >UniRef50_A6LWY3 Transcriptional antiterminator, BglG n=2 Tax=Firmicutes RepID=A6LWY3_CLOB8 Length = 635 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 80/618 (12%), Positives = 197/618 (31%), Gaps = 52/618 (8%) Query: 14 EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAGYQLEIFERRSFFQL 72 + + + VS RTI DI YL K I GY LE+ + F + Sbjct: 13 NEDYCSIEYFIHKYKVSKRTIQSDISYLMRISTSKGFEIHTKRGVGYLLEVKDDELFEKF 72 Query: 73 LQ----------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE-R 121 L+ K L L + N + ++A + +T + + +++ + Sbjct: 73 LKTLDENIVFKIKERPSQILAFLSVQNEYISMDKVADTFQVSKTLIKHDIKEVEELAKGY 132 Query: 122 TCCLASRPGLGHFIDETEEKRVILLANLLRK-------------------DPFLIPLAGI 162 L + G I ++ L + + LI Sbjct: 133 HLALEKKSHHGIRIVSSDRNLKKYLCQEYQTKNVFVRMAVDGVVIDFSHVESQLIRQMNK 192 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSG 222 + N+ + + + M L + ++ + I + + Sbjct: 193 EKLNI-NYNELLNMIVYLKSMVYISLKGNKQPVQDYEFHESNPIEKIVESLIHTMEKKYK 251 Query: 223 LFLGDNAVRTL------TGLIEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVEN 275 + ++V L + + D+++ L++ + D L Sbjct: 252 VCFDKDSVEELIEVMQKNIHRKDTYVSFTDNLTDDIEVFLKKTDETYDTHFFEDQDLKRL 311 Query: 276 ITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD--IPLFDSDLI 333 + H+ + ++ + N L +P F++++ F +L E+ + + + Sbjct: 312 LLSHISLLVDRLHNKISYKNALANELSITYPMIFNIAIQFCDILHEKYNVEFTFDEIGFV 371 Query: 334 GLYFACALERHQNER-----QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVA 388 ++FA + + + + + ++ S A + ++ +E V L + Sbjct: 372 AMHFAAHMVKEKQLKLQSYNKICVICSSGGGSAYMIKMQLESVFPKSEVKTFSFLQQDEM 431 Query: 389 IREEIEPLLIINNSHYLLDDAVNNYITV---KNIITAAGIEQIKHFLATAFIRQQPERFF 445 I + + + + Y + + K++ I + + I + P + Sbjct: 432 ISYKPDIIFTVIPISYDAHIPIIYIKELLDDKDLYRIRQILECDDYDPYTLINENPIYYS 491 Query: 446 SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPH 505 F ++++H+ R++ L + + A ++ RE + +N + IPH Sbjct: 492 YFSKEFFNI-TEEDNYEHLIRKMAEDLEKKGYGKEGYADLVMEREAFISTIYLNGVCIPH 550 Query: 506 CWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARH-ELKIFSYLASILCQ-HPA 563 R L +P + + + + C + I L ++ + Sbjct: 551 PIETDALRNVISVSILKKPFIWLEKEVRIIFMICLKKEQVEVYKDITKKLYQLMREPKYL 610 Query: 564 EIIAGLTGYEAFMELLHK 581 E + + +E M ++ + Sbjct: 611 ERVIRVKSFEELMAVMKE 628 >UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C483_LISGR Length = 691 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 93/683 (13%), Positives = 215/683 (31%), Gaps = 105/683 (15%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ++ R I++ + ++ T LA VS RTI RD+ + TL G + Sbjct: 3 MSARARLIMEYILTSKEAITTSALADYMSVSERTIRRDLKEIETTLQGFHLELQRENTIL 62 Query: 60 QLEIFERRS-----------FFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 +E E + + L +L + LA+ L + V Sbjct: 63 TIEGNEADKQAFKWQLLDLSYNEYTPLERQQYILKTILKSDEAVKLIALANDLGVTVATV 122 Query: 109 AERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRK---------------- 152 + L ++++ + + + + G G + TE + LL NLL + Sbjct: 123 SNDLTKMEEELDESVRIERKRGSGVRLIGTETAKRTLLTNLLGEQFSEANLFRLMQEQPE 182 Query: 153 ---------DPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILA--------- 194 + L + ++ + Q + + Y+S +I Sbjct: 183 EEGAKQAASERLLHLIDRKLIQKVEKVLRNWRQQLEYQITDDAYISLVIHIVISIDRMLA 242 Query: 195 ---IYALRNQLTDEWPQY--PGDEIKQ-IVEHSGLFLGDNAVRTLTGLIEKQHQQAQ--- 245 IY LRN+ +P++ + I + + + + A + + Sbjct: 243 GHFIYELRNENAKRYPEFQTAKEIIAECLEMEADVVPDGEAGLVTMHIRGAKALHYDSGD 302 Query: 246 ------VISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMN 299 + + + L+ V + L++ +T HL L + Sbjct: 303 FTGNEHIQAVTVAKQLITSVEAKIDRRLDQQTLLKGLTAHLRPTLRRLHENMRIHNPLVK 362 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQP--IILLSDQ 357 ++K +P FD+ T + + ++P + + L+F A+ + E+ I++ + Sbjct: 363 SIKQDYPELFDIVKAAFTEIYQSGNVPDEEIGYLVLHFGAAILQGNEEKVYSGIVVCASG 422 Query: 358 NAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVK 417 + + + + + + + SL EL ++ +II+ D Y V Sbjct: 423 IGTSRMLVTRLRQAIPALKKLQTVSLFELPLQMKKENYDVIISTIDLGNVDF--PYFFVS 480 Query: 418 NIITAAGIEQIKHFLATAFIRQQPERFFSAPG---------------------------- 449 ++T + +I+ FL Sbjct: 481 PMLTEREVSEIEVFLNEKQANYHRHADEEEINRQTTILETVHRLENKQYYISTIIDLLNN 540 Query: 450 -SFHYSNVRGESWQHITRQICAQLVAQHHI--TADEAQRIIAREGEGENLI-VNRLAIPH 505 + R +C +++ + + +++RE I LA+ H Sbjct: 541 FQVSRIEGNSSDLEDTLRALCMRIMEKDREMNVEMLIKSLLSREKWSGFGITGTNLALFH 600 Query: 506 CWSEQERRFRGFFITLAQPVE---VNNEVIN---HVLIACAAADARHELKIFSYLASILC 559 + + + L + + + ++ V++ A+ L++ SY++++L Sbjct: 601 ARNSEVKTPIFQIFPLENKMTVPAMGGDNMDASTFVVLLAPEKFAQQGLEVMSYISAMLI 660 Query: 560 Q-HPAEIIAGLTGYEAFMELLHK 581 + I + + Sbjct: 661 ESEQTTRILESADSSLITSFIIQ 683 >UniRef50_B0KCW5 Transcriptional antiterminator, BglG n=9 Tax=Thermoanaerobacter RepID=B0KCW5_THEP3 Length = 680 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 100/667 (14%), Positives = 233/667 (34%), Gaps = 93/667 (13%) Query: 2 LNERQLKIVD-LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L RQ I+ LLE+ P +L++ VSGRTI+R+I +N L + + Sbjct: 4 LTVRQKFILKTLLEKGPSNREDLSKLMDVSGRTIMREIASINNNLKKYKAVIVEDNGQII 63 Query: 61 LEIFERRS-----------FFQLLQKHDNDDRL-LALLLLNTFTPRAQLASALNLPETWV 108 L+ E LL + + LLL A + N+ E + Sbjct: 64 LKGEEEALDKIHASLGAIPLQWLLTPEQRQILMTIQLLLSEEPIKAAYFSYQFNVVEGTI 123 Query: 109 AERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN- 166 + L ++++ + R L R G G ++ +E + + L + L ++ Sbjct: 124 SLYLDKIEEWLKMRNLSLIRRRGYGIKVEGSELDKRNAIVELFYNYKPIEELLAFVYNDE 183 Query: 167 --------------------LQHLSTACDNQHRWPLMQGDYL---SSLILAIYALR---- 199 ++ ++ N L +Y L+++IY + Sbjct: 184 KDNYVYTFFSTVFDNELVQLVKRIAQQIKNVIHGHLSDLNYFGMFVHLLVSIYRTKIDKP 243 Query: 200 --------NQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIE--------KQHQQ 243 + ++++I++ + ++L D + L + + ++ Sbjct: 244 IQLNDEFVKDILLSNEFIFMKDVEKILKENEVYLPDAELAYLALHLSPKKYVYKQNRFEE 303 Query: 244 AQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLK 302 + D + +++ V + ++ I D QL+ ++ H L + + +K Sbjct: 304 LGISLQDLSKEVVEEVSRLLNIKINCDEQLIVGLSQHFEPALYRLTMGLQTTNPLVEEIK 363 Query: 303 AAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ---NERQPIILLSDQ 357 + F L+ + ++ + + + I ++ A+ER Q + + ++ + Sbjct: 364 NYYGDLFKAVNKACKLIFSKYNLMIPEEEIGYITMHIGAAIERQQALSKKLRVFVICPNG 423 Query: 358 NAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVK 417 A I ++ I ++ E + + ++ L+D +N I V Sbjct: 424 IGTARILSAKLKTLFREVDAIDIGAIWEYKKKGDNYDLIISTV----KLEDLKDNVIVVS 479 Query: 418 NIITAAGIEQIKHFLATAFIRQQPERFFSAP---------------GSFHYSNVRGESWQ 462 +T I++++ F+ ++++ E + P + V ++ + Sbjct: 480 PFLTEEDIKKVEEFIEKYVVKKEKELPGNLPMVERRRNFEIADEILRNLQLKYVEAKTIE 539 Query: 463 HITRQICAQLVAQHHITA--DEAQRIIAREGEGENLIVN-RLAIPHCWSEQERRFRGFFI 519 + + I L + + I RE G +I N +A+ H S++ Sbjct: 540 DLIKFIAKDLYDLMLTEDAKEIEELIKKREAMGNVVIPNTHIALIHTRSDKMVMPFVGVY 599 Query: 520 TLAQPVE-----VNNEVINHVL-IACAAADARHELKIFSYLA-SILCQHPAEIIAGLTGY 572 L P++ + E ++ L + A++ L++ ++ S++ I L Sbjct: 600 KLKTPLKMKSAGFSYEEVDTFLVMLARKAESSEILEMLGKISISLIEDKAFNEILRLGDI 659 Query: 573 EAFMELL 579 + L Sbjct: 660 KDIRNSL 666 >UniRef50_C0X3N3 Regulator of sorbitol operon n=23 Tax=Enterococcus RepID=C0X3N3_ENTFA Length = 620 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 92/625 (14%), Positives = 209/625 (33%), Gaps = 57/625 (9%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L R +++ LL + EL ++ S +T+ ++ID LN L G A+I + +Q Sbjct: 3 LVNRWYQVIKLLVDHKGMSLQELQEKLAASPQTVRKNIDTLNDELIGIAQIIQKENL-FQ 61 Query: 61 LEIFERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 LEI F ++L + L+ + F L+ L + V Sbjct: 62 LEINNFEGFEEVLSGRLKRESDFNSSSKRVSYIIKRLIEEDQFISTYDLSEELAVSRGTV 121 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 + + R+K+ + P G ++ E +L N +++ L T+ + Sbjct: 122 NKDIKRMKELIAPWQVAVVGTPNRGIHLEGKEFDLRLLHVNYVQEYFEEQFLHETTKQMI 181 Query: 168 QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYP------------GDEIK 215 Q + + Q +L +++I R + P +E+ Sbjct: 182 QKII-----KETRLAKQDSFLLRRVVSIVLQRVLAGKLITELPPEYVDYVRHNEQIEELM 236 Query: 216 QIVEHSGLFLGDNAVRTLTGLIEKQHQQA--------QVISADNVQGLLQRVPGIASLNI 267 +E + R+ + + + AD Q +++++ + Sbjct: 237 YHLEITYNVTLSQWERSFISFPFNINTNHIRNSLLTDEGLLADYFQKMMKKIHHSVVVEF 296 Query: 268 IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPL 327 + L + HL + V+ E ++ +P A++++ + L L+ + Sbjct: 297 DEDFLFSEMKDHLRNVMNRLVFHVECHDLFYGEIERQYPLAYELAKIGLQELGRLLNRCV 356 Query: 328 F--DSDLIGLYFACALERHQ---NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARS 382 + + LYF AL + +++ ++ S + A I Q +E+ + V IA Sbjct: 357 PTVEFGYLALYFELALRGNYEAGAKKEIAVICSTGHGTALIIQRQLEKVLGP-DVQIAHF 415 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE 442 E RE + I I + N+ + + Sbjct: 416 SEEEAERRELNQYFAIFTTIPLKNIRPQTPMIHLTNLFNDTWLRNEWQRAKEIRSVESQN 475 Query: 443 RFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLA 502 + + + ++ +++ A L A+ + +RI RE + + + +A Sbjct: 476 IHMT-----YQLLENTQGYRANIQKMIADLEAEKLVDPQFIERIFTREDQQTTIFESGIA 530 Query: 503 IPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD-----ARHELKIFSYLASI 557 PH ++ + + ++ +L+ + L+++ L +I Sbjct: 531 FPHTINQALSTIILSIGVFEESLVTPEGKVDVILLLGIPEELTATVEAELLQLYDRLFTI 590 Query: 558 L-CQHPAEIIAGLTGYEAFMELLHK 581 + + A E + + Sbjct: 591 AGDERLRNELRKQRDVLAVKEWMQR 615 >UniRef50_Q5WJ14 BglG family transcriptional antiterminator n=2 Tax=Bacilli RepID=Q5WJ14_BACSK Length = 678 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 86/675 (12%), Positives = 193/675 (28%), Gaps = 93/675 (13%) Query: 1 MLNERQLKIVDLLEQQ-PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ML+ER ++ + Q T E+ + VS R D D LN+ L Sbjct: 1 MLDERSYTLLKTITQHRQVTKPEVLRMMQVSERQFGYDFDKLNYALKNLHLPPIQLKNNT 60 Query: 60 QLEIFE-------------RRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 + + + ++ L + + L + + Sbjct: 61 FILEENLIQAVESGELYEMNPALVTISKEDRVYLLYLYTFIRKEPISNFHYQTFLGVSKN 120 Query: 107 WVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRV--------ILLANLLRKDPFLI 157 E + R ++ E + G+++ E + ILL + + + Sbjct: 121 TALEDVKRTREICEEWNLSMIYSRKDGYYLIGDEFDKRRLALYAVNILLDSPFGNELIHL 180 Query: 158 PLAGITRDNLQHLSTACDNQ---HRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEI 214 PL D+ + + + ++ + ++ + LR + +P + Sbjct: 181 PLNDWGYDDFIEETESVFAEVVKKHSIMLVKSRKNEILPFLTYLRARKKYANLNFPEYQE 240 Query: 215 KQIVEHSGLFLGDNAVRTLTG---------------LIEKQHQQAQVISADNVQGLLQRV 259 I + G T G + ++ + + + +++ Sbjct: 241 HIIERQNAFLAGKEMAETFFGKEAVSEQYFVSLMLLISMQESKYENALLEQLAERIIEEF 300 Query: 260 PGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 + L + + + L +++ HL+ + +N +K +P F+ + Sbjct: 301 ERVTLLPLENRETLKKSLYDHLVPAFFRISFKIPLVNPLINRIKEEYPELFEFVKIALAP 360 Query: 319 LREQLDIPLFDSD--LIGLYFACALE---RHQNERQPIILLSDQNAIATINQLAIERDVL 373 L + + + L+F LE R+ + +I+ S+ + + + + ++ Sbjct: 361 LSMWTGQVISEEEIGYFTLHFGGYLEKDKRNHSTVNGLIVCSNGVSSSLMLKAQLKEMFP 420 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLA 433 N + S+ ++ I + L+ + + I++I Sbjct: 421 NIHFLNVHSIDQMTEIPKSSYDLIFSTVRVPSTKPVYLVKPLLSQVEKNYLIQEIAKEFP 480 Query: 434 TAFIRQ----------------------------------------QPERFFSAPGSFHY 453 + R P Sbjct: 481 SLNYRNISVDQIIEVIRKYADIRDEERLFSELVHVLYFEGFKKGRYSPMLSELLTKDMIS 540 Query: 454 SNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EGEGENL-IVNRLAIPHCWSE-Q 510 W+ R L I +I E G + I +AIPH + Sbjct: 541 FTDERLDWKEAIRLAAKPLSDTGKIEDSYVDAMINNVEELGAYIHIGKGIAIPHARPQAG 600 Query: 511 ERRFRGFFITLAQPVEVNNEVINH--VLIACAAADARHELKIFSYLASIL-CQHPAEIIA 567 + F+ PV + + + + I AA D LK S L IL + + Sbjct: 601 VNQVGMSFLRTKTPVLLLGQEQHKIDIFICIAAVDNETHLKALSQLTKILADNDKLKELK 660 Query: 568 GLTGYEAFMELLHKG 582 E + + ++G Sbjct: 661 QAKTVEEIVNINNEG 675 >UniRef50_A8RA27 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RA27_9FIRM Length = 638 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 95/634 (14%), Positives = 210/634 (33%), Gaps = 58/634 (9%) Query: 1 MLNERQLKIVDLLEQQ---PRTPGELAQQTGVSGRTILRDIDYLNFT---LNGKARIFAS 54 ML +RQ+ I+ + Q + + VS RT+ D+ + I + Sbjct: 1 MLIKRQISILLEMSNQVGEYYKANHFSDKFNVSLRTVQNDLKAIKEETLMYKNDFIIESK 60 Query: 55 GSAGYQLEIFERRSFFQLLQK----------HDNDDRLLALLL----LNTFTPRAQLASA 100 G ++ + F Q + +D DDR+ LL + A Sbjct: 61 VPFGTRIIVMHNEKFKQFINDLKLQSDEFNTNDRDDRIYKLLNFLLDQRKSISITKCADY 120 Query: 101 LNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + + ++ + L L+ + + +ID E + I L + ++P Sbjct: 121 IFVSKSTLMLDLKELETIISKYSLRLIQSKGYLWIDGLERDKRICLMDNNYAYLSVLPTN 180 Query: 161 GITRDNLQHLSTACD----------------NQHRWPLMQGDYLSSLILAIYALRNQLTD 204 IT H+S + L + + Y + D Sbjct: 181 LITGSETGHISFIHNLLINELLHKQYPISDVEFQNLILWLNISIRRIGSFFYLNEEDIND 240 Query: 205 EWPQYPGDEIKQ-----IVEHSGLFLGDNAVRTLTGLIEK-----QHQQAQVISADNVQG 254 + EI + I L + + L I + + Sbjct: 241 DITHSVEIEIARNIFERIETKYLLRVPQTEINFLAMYINNHSNFRNTDYISEDLNEFILY 300 Query: 255 LLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 L+++ + D L ++ HL+ ++ + + ++ +K ++P AFD++ Sbjct: 301 ALEKIKESYPTDFLHDVNLRMSLALHLVPLISRAKNNVQIKNEMLDYIKQSFPYAFDIAT 360 Query: 314 HFITLLREQLDIPLFDSD--LIGLYFACALERHQNER--QPIILLSDQNAIATINQLAIE 369 +F LL E+ + + +S+ + +YF ++ + + + + ++++ + Sbjct: 361 YFSYLLSERYNCLIKESETAFLAIYFNKSINDYAVLKGNKRLCIITNLKRSEYFLLEQLL 420 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 D + +S + +++ + ++ V + A+ +++IK Sbjct: 421 YDQFRKYIADITFVSSQELEKIDLDAFDLFFSTEDNKATEVGLATKLTFFPDASELQKIK 480 Query: 430 HFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 + + R F F E Q + +QL + + + I R Sbjct: 481 VRIEGFKNVEDIIRLFDPRLFFRAEIPAKEKVQKKLVKTASQL----YQIENLYEEIELR 536 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN--EVINHVLIACAAADARHE 547 E G N +AI H I L +P+ +N +N V + C + Sbjct: 537 EEFGSTYFGNGVAILHPMHLITNESFIGEIVLKKPIPWDNDGNYVNLVFLVCIQKNNLEA 596 Query: 548 LKIFSYLASIL-CQHPAEIIAGLTGYEAFMELLH 580 + + YL+ +L + + + YE F ++L Sbjct: 597 FRAWDYLSPLLFNNQFKQEVLEVENYEHFKQVLE 630 >UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLZ0_CLODC Length = 661 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 85/654 (12%), Positives = 217/654 (33%), Gaps = 74/654 (11%) Query: 2 LNERQLKIVDLLEQQPR-TPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG-Y 59 ++ R I++++ ++ T + + GVS RTI I+ +N L G G Y Sbjct: 6 MDPRVFLILEMVLEEDTNTLEQFSNVLGVSTRTIRNYINQINRELKGGIAKIVKNEKGTY 65 Query: 60 QLEIFE-----------RRSFFQLLQKHDNDDRLLALL----LLNTFTPRAQLASALNLP 104 + I + R + + D+R+ +L + N LA + + Sbjct: 66 SIRIEDESKLIEIVNFNRGKLSNFINLNSPDERINYVLDILTMTNNPITIDDLAEEICIG 125 Query: 105 ETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT 163 T + + L + + E L +P +G + E +L+ + L ++ + Sbjct: 126 RTTLIKDLKKADRILAEYDLELKRKPNIGMILVGEEMDIRLLILDRLYENYIDVLENVNQ 185 Query: 164 RDNLQHLSTACDNQHRWPLMQGDYLS---------SLILAIYALRNQLTDEWPQYPG--- 211 + ++ C L + + L + + LRN ++ + Sbjct: 186 INLVKDYDIECLRDELKKLFKKEELYITEQVLRDVERYIIMSVLRNLNGYKFEKIDKRFE 245 Query: 212 ------------------DEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQ 253 ++I IV + + + + + D+V+ Sbjct: 246 VIRCSDEYTLGLKLKALLEKIFNIVLNEKETIFLTMPLIGRKAPSTKLALSSIKINDSVK 305 Query: 254 GLLQRVPGIA----SLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 ++ V ++ D +L+EN+ HL L + + + +K + Sbjct: 306 EVVDEVTSFLLETSGIDFKEDKKLIENLEYHLYFALNRMRFNIRVKNPLLQEIKERYTFP 365 Query: 309 FDMSLHFITLLREQLDIPL--FDSDLIGLYFACALERHQNE----RQPIILLSDQNAIAT 362 + ++ ++ E+ D+ + + I L+F E++ + + ++ A Sbjct: 366 YSVAKIAAMIIEEKFDLKICDHEIGYIALHFGSYFEKNSRKVLNVNRVAVVCGTGLGTAQ 425 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + ++ I + + + S E A + ++ ++ + D V + Sbjct: 426 LIRIKIGKILGESVEVNTFSDIEAKANLDLLKYYDLVFTTVDFKTDLDVPIFRVNALFNE 485 Query: 423 AGIEQIKH----------FLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQL 472 I++ + I + + + ++ + +L Sbjct: 486 ESIKKEIENAILLKNSINLKSIKKIEKNIPFIGKLIEEDKFFILNKSTFMENLEDMLEKL 545 Query: 473 VAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVI 532 V + I + ++++ RE + + N +A+PH + F L +PV + + I Sbjct: 546 VHKGIIDIEFKKKVLKREKKSSTALDNYIALPHSVNTNGENLYLSFGILEKPVVWDTKEI 605 Query: 533 NHVLIACAAADARHELKIFSYLASILCQ-----HPAEIIAGLTGYEAFMELLHK 581 +++ + + + E +A + ++ F +++ K Sbjct: 606 RIIILMIIPDKNVDSTDLIIKSYEEVLEVGRDKKMIEELAKVKSFDEFYKIITK 659 >UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9M5_9FIRM Length = 698 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 98/694 (14%), Positives = 212/694 (30%), Gaps = 123/694 (17%) Query: 1 MLNERQLKIVDLLE--QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSA 57 +L R I+ LL + P ++A Q GVS RT+ R+++YL+ L + Sbjct: 2 LLTNRIRGILLLLMDAEGPLKEDDIADQVGVSRRTVQREVEYLDGALREYGLLLHRKKGV 61 Query: 58 GYQLEIFE--RRSFFQLLQKHD---------NDDRLLALLLLNT-FTPRAQLASALNLPE 105 G + E + L++ + +RLL L+ + + L + E Sbjct: 62 GISVTGSEQAKERLRGELEEKEAGEPTDVAGRRNRLLFELIRDKVPRKIYYYSQLLGVSE 121 Query: 106 TWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKD----------- 153 + + + L E L R G G + +E + + ++ Sbjct: 122 ATINKDMSALGPWLEQNHLKLVKRQGFGVALSGSERDLRAAMRRYVSENMSLPWAGIEGL 181 Query: 154 ----------------------------PFLIPLAGITRDNLQ------------HLSTA 173 ++ L+ HL+ A Sbjct: 182 KESAAGALIHTRDQNLYALLATDTVSRVYEVLARMRKEETRLKGLAESAYTNLIFHLAIA 241 Query: 174 CDNQHRWPLMQGDYLSSLIL---AIYALRNQLTDEW-----PQYPGDEIKQIVEHSGLFL 225 + + +++ D L YAL ++ E P E+ I+ H L Sbjct: 242 VERVKKGAIVEEDPGLVNKLGTWDEYALAGKIRGEIEREFSIHMPDQELSYILLH----L 297 Query: 226 GDNAVRTLTGLIEKQHQQA-QVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRC 283 + + E + + + + ++ + + ++ D + + + HL Sbjct: 298 LGSKMAYHETEAENRQFLFPEEDLLEIIDRMIDQFDTEMANSLKCDEEFIRGLIMHLQPA 357 Query: 284 LAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACAL 341 + + +K +P + S ++R++ + D + + ++F A+ Sbjct: 358 MFRMSEKMSIYNPVLPEIKREYPEIYAKSRRAAEVIRDETAFEVSDDEIGFLSMHFGAAV 417 Query: 342 ERHQNERQPI------ILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEP 395 ER + I+ S +A + + R + A +LS+L E Sbjct: 418 ERVRKREGKRRRVSIGIICSSGFGVAQLMIARLTRVFGQEAELSAYALSDLTEHVERRTD 477 Query: 396 LLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSN 455 + + + I V ++ + +E+I++ + ++ +N Sbjct: 478 FFVTTFDWCADE---IDSIRVSPMVPESDLEKIRNKIEEYAYVKRESENQVFDRQLDQAN 534 Query: 456 VRG------------------ESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI 497 S+ + Q+ ++ + A +I RE + Sbjct: 535 EMIIEIRGLIRRYCDYETDPKISFPDLVYQLADRVTESQAVAEKIAGKIQRREHLNSQIF 594 Query: 498 VNR-LAIPHCWSEQERRFRGFFIT------LAQPVEVNNEVINHVLIACAAADA--RHEL 548 LA+ HC S R A P + + I V+ D R + Sbjct: 595 PELDLALLHCRSRMIREPVFISCRPSGDRSFADP---DFKGIRAVIFMVMPEDEQLRMHM 651 Query: 549 KIFSYLA-SILCQHPAEIIAGLTGYEAFMELLHK 581 +I ++ S++ E + L K Sbjct: 652 QILGQISASVIRDEAFVGAILHGDEELVKKELKK 685 >UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A0_9FIRM Length = 654 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 76/653 (11%), Positives = 189/653 (28%), Gaps = 77/653 (11%) Query: 2 LNERQLKIVDLLE------QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG 55 ++ + I++ L + L++ VS I + +D +N L Sbjct: 6 MSRKNELILNQLSSALMKNDDFLSALSLSKMLNVSETVIRKKVDEMNEMLVQAHLGSIEK 65 Query: 56 S--AGYQLEIFERRSFFQLLQKHDNDDRLLALLLLN--------------TFTPRAQLAS 99 G +L I++ ++ ++ N + + +L+ Sbjct: 66 KPRKGIRL-IYDPQNAQKIADLFSNYEYIDITAGEELLYVYLRVLLSSNVERITVTRLSE 124 Query: 100 ALNLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANL--------- 149 + + L Q L+ + G + +EE + + + +L Sbjct: 125 MVYQSVPVCSRHLETCTQWLSLFNIQLSIKRNYGISLQGSEENKRLAIKHLVINDPIHSV 184 Query: 150 ----------------------LRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDY 187 + K+ + L + + A L + Sbjct: 185 EQSIQQFAKGINLELLKSCIADIEKEWNFTFAEESYKSILLYAALAITRSDFSVLHLSES 244 Query: 188 LSSLILAIY-------ALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ 240 +++ R + P E+K L + T +++ Sbjct: 245 EEEIVVKYNEYNLAQSIFRIINKKFYVNIPESEVKYFAIQL---LCSKMIHTQEIPAKEE 301 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMN 299 V ++ + I ++++ D +L + H+ + + + N Sbjct: 302 LTSYDKKLKQFVHKIISVISDIMNVDLMDDNELYYGLLNHIRPAIFRMKFEKHSTKELTN 361 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIPL--FDSDLIGLYFACALERHQNERQPIILLSDQ 357 ++ + + +S L E DI + + I LY +LER + ++ Sbjct: 362 FIQQEYKQTYRVSWALSALFEEYYDIKITSTELSYITLYIQTSLERRMRPLKIALVTELG 421 Query: 358 NAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVK 417 + + I + I S E+ L++ + + V ++ Sbjct: 422 MGLNQMFCNKIRMSIPKIDEIAIFSYHEVKIDVVGKYDLIVTTSKLDFDQEKVVQIKSLL 481 Query: 418 NIITAAGIEQIKHFLATAFIRQQPERFFSAPGSF----HYSNVRGESWQHITRQICAQLV 473 + ++Q + T + Q + F + + + +++ L Sbjct: 482 SNTGVEELKQKIEIIRTQQLMDQRKFDPRCHNLFDPKLILIHPMVSDKEELLQRMNQVLN 541 Query: 474 AQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN-EVI 532 A ++T + ++ RE I N +AIPH + + L +P+ N+ + + Sbjct: 542 AGGYVTEHYIKSVLDREKTVSTYIGNGVAIPHGFQTYVNESKVVIAVLKEPLAWNSTDEV 601 Query: 533 NHVLIACAAADARHELK----IFSYLASILCQHPAEIIAGLTGYEAFMELLHK 581 V + + +E K + ++ L + Sbjct: 602 RLVFMLALRINNAYESKRTQAFYQGFLKLIDTDYDVEKLTEMDQNELYRYLMR 654 >UniRef50_C2KEC2 Transcriptional antiterminator n=1 Tax=Lactobacillus crispatus JV-V01 RepID=C2KEC2_9LACO Length = 594 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 91/602 (15%), Positives = 220/602 (36%), Gaps = 48/602 (7%) Query: 18 RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQ--- 74 T L+ Q GV+ RTI I +L S S GY+ E ++ SF Q Sbjct: 1 MTAKMLSMQLGVTERTIKNKIK----SLREAGIKIKSSSQGYRYE-GDKASFEQNSTIIL 55 Query: 75 ----KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPG 130 L LL ++ L+ L + E + + + L+ +R G Sbjct: 56 PQTYSQRKVWLLRHLLQADSSVNIYDLSETLYINEVELRKEIQNLEVELSDFSLTLNRMG 115 Query: 131 LGHFIDETEEKRVILLANLLRKD-PFLIPLAGITRDNLQHLST------ACDNQHRWPLM 183 + + TE + LL+ L+ ++ + I ++N + + + Sbjct: 116 DNYEVIGTERNKRKLLSALIYRELKGTLLTEKIIQNNFKTIDVRSVKKALNKYLEKNNFK 175 Query: 184 QGDYLSSLILAIYALRNQLTDEWP-------QYPGDEIKQIVEHSGLFLGDNAVRTLT-G 235 D+ + +L + ++ + D + I + L ++ VR L Sbjct: 176 IDDFDFNNLLLHTIIMIDRGNDNLSITTSNLEIVNDIVNWIKNKQKVVLSNSDVRQLEEM 235 Query: 236 LIEKQHQQAQVISADNVQGLLQRV----PGIASLNIIDAQLVENITGHLLRCLAAPVWIA 291 + +Q+ ++ D ++ L +++ +LN+ + + HL+R + + Sbjct: 236 FLLLSNQKIELKDDDKIEDLFRKIVGFVRRTYNLNLDEKLFKKRFLPHLIRLIERYKSSS 295 Query: 292 EHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ 349 MNN+K + P ++ + + E I + + + I L+ ++ + Sbjct: 296 SIHNPLMNNIKQSSPTIYECACLIAYAINEAYGIEINEEEIAFIALHVGNSVAEQIQKEN 355 Query: 350 PIIL---LSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLL 406 II +SD + I N +++ ++S++ I + + +++++++ Sbjct: 356 KIICQLFMSDYHGNVQRLVSQINSSFGN-DLLLLDTVSDVNEILRQTQLIIVVDSNQ--- 411 Query: 407 DDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSF-----HYSNVRGESW 461 N + V + + + +++ + + + +R F Y + + +++ Sbjct: 412 QFPQFNTVYVSSFFLSNDVTKLQKVIREIKLVLRSQRLRIGLKQFTSENNFYIDNKHKNY 471 Query: 462 QHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITL 521 + + ++ ++ + D +++ RE +AIPH + + F Sbjct: 472 KAVIAELSTKMSKSGIVGKDFENKLLEREKISSTAFG-LVAIPHAIDYDSKFSQWFIYIN 530 Query: 522 AQPVEVNNEVINHVLIAC-AAADARHELKIFSYLASI-LCQHPAEIIAGLTGYEAFMELL 579 + V+ + I V + ++ D K+F L++I + + Y F+ + Sbjct: 531 PKGVDWLGQKIYLVFVLAYSSKDDDEFRKVFDDLSTIVIDDKRVADLINSKNYNDFVNRI 590 Query: 580 HK 581 K Sbjct: 591 TK 592 >UniRef50_B9DPY6 Putative transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DPY6_STACT Length = 623 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 84/620 (13%), Positives = 193/620 (31%), Gaps = 42/620 (6%) Query: 2 LNERQLKIVDLLEQQP---RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 + ERQ+K++ L T E+A VS RTI DI Y+N + G Sbjct: 1 MIERQIKLIQLFLNNEYQFLTSDEVASFLDVSNRTIRNDIKYINSSFLKDVIKSIKSR-G 59 Query: 59 YQLEIFERR---SFFQLLQKHDNDDRLLA-----LLLLNTFTPRAQLASALNLPETWVAE 110 Y L+ L D D+++L LL+ +L +L + + + Sbjct: 60 YHLDTDRYSVEYIESSLKDYTDKDNKILLTLAYQLLMHEEQLTLIKLEKEYHLTKNEMLD 119 Query: 111 RLPRLKQRYERTCCLAS-RPGLGHFIDETEEKRVILLANLLR-----KDPFLIPLAGITR 164 L R+K E+ + + + G + +E + +L + + L + + Sbjct: 120 YLNRIKAWCEKFDVIINMKQRKGLEVIGSETDINNAILHLNQLSSHENSVETLILNELPK 179 Query: 165 DNLQHLSTACDNQ--HRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSG 222 ++Q + + LI+ + + + + + + S Sbjct: 180 AHVQIIKEIIKRTLGEFGVKTSDIQIEQLIIHLILIMKRRQSQNELISEEVNDEAFNISK 239 Query: 223 LFLGDNAVRTLTGLIEKQHQQA----------------QVISADNVQGLLQRVPGIASLN 266 + + + + + Q Q+ + L++++ S+ Sbjct: 240 RIVDEINGKLGYDINTETIQLFSFFIGYHFDKFDLGVQQLFIESYINLLIEKMENRISVQ 299 Query: 267 II-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 D L EN+ H R + +K +P F++ + + + + Sbjct: 300 FTKDKTLKENLYSHFSRTYLRIMKDVYLNNPLTKEIKTLYPFVFNVLYEIVQRMSDDSGV 359 Query: 326 PLFDSD--LIGLYFACALERHQNERQPIILLS-DQNAIATINQLAIERDVLNCRVIIARS 382 L + + + ++F +++R++ + +++ I+ + I + VI Sbjct: 360 ELTEDEIAFLTIHFQSSIDRNEQDVIKVVIACFYGIGISQLLATKISKFSNRIEVIDTLK 419 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE 442 L E+ LL+ + + + + + ++ Sbjct: 420 LEEIEQYDFSHIDLLMTTHQPENNKIPNHLELLQVTPLFNDNDQHQLQQFMNRKLKPTMH 479 Query: 443 RFFSAPGSFHY--SNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNR 500 A +F + + + I ++ L H + + + RE I Sbjct: 480 IDEMAEVNFIVGSTEDQEITMPLIFQKADEILNHNHALIDGYIETALEREKMSSTYIGKE 539 Query: 501 LAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQ 560 +AIPH E+ + + + V A K + + + Sbjct: 540 IAIPHGDPEKVSKSHVIIFRSNKGFYWKENKVKLVFFLAIAQRDIELTKRIIQTIAHIDE 599 Query: 561 HPAEIIAGLTGYEAFMELLH 580 + L + ELL+ Sbjct: 600 KKINELIYLDDTKFKAELLN 619 >UniRef50_B2TIY2 Putative transcription antiterminator n=3 Tax=Clostridium botulinum RepID=B2TIY2_CLOBB Length = 654 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 87/648 (13%), Positives = 222/648 (34%), Gaps = 72/648 (11%) Query: 2 LNERQLKIVDLLEQQPRTP-GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG-Y 59 L + I+++L + + + GVS R+I + L + + + Y Sbjct: 6 LERKLFTILEMLADSKGNALKDFSDELGVSTRSIRTYLKQLQEEIPKEVVEIVKTNNSEY 65 Query: 60 QLEIFERRSFFQLLQKHDNDDR---------------LLALLLLNTFTPRAQLASALNLP 104 +L I + F QLL+ + + + L+ LN LA +N+ Sbjct: 66 KLNIKDDEKFKQLLELNRRQKQKFCQLNNPEERIDYLINRLVELNEIVTIDDLAEEMNVG 125 Query: 105 ETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGI 162 T + + L ++ Q+ E L + G I+ E R+I+L ++ + I L Sbjct: 126 RTTLVKDLKKVDQKLDEYGLVLKRKTNSGIKIEGDEINLRLIILEHICKTYNDSIILLES 185 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDY------LSSLILAIYALRNQLTDEWPQYPGDEIKQ 216 + Q L + + +++LI I + +L ++ + Sbjct: 186 NNILTKKEVIKLQEQIVLNLKENKFSVTEALINNLIRYITVMLMRLKNDKNITSLQSQYK 245 Query: 217 IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNV------------------------ 252 I++ S + +++ ++ + I + Sbjct: 246 IIKESEEYEIGKTIKSTIEALKDKKIDDLEIIFIVMPLLGRNAPLYHEVLRNLTIGENIT 305 Query: 253 ---QGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 + + +V L++ D QL++ + HL L V +++ + +K + Sbjct: 306 LLRKQIFDKVFEFTGLSLEEDEQLIQGLEYHLYYALNRIVLNIKYKNPMLKEIKEKYKLP 365 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI----ILLSDQNAIAT 362 ++++ +++ ++ + + D + + L+F +ER I I+ A Sbjct: 366 YEVAKIAASVIEDKYQVQVEDDEVGYLALHFGTYVERAGKSFIKIENAAIICGTGLGTAK 425 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + + +++ + I +S S+L E +I L + + + +I Sbjct: 426 LLIIKLKKILGEE--INFKSFSDLDFTEEMASNYDMIFTLVDLDINTEIQIVKITSIFDE 483 Query: 423 A------GIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQH 476 + + + + + ++ + L+ + Sbjct: 484 SQLKGEIESQIFLNKTNEKRNDTEQYILNGMLDKKLVFYLNKNNFMDNLEYMLDSLIKSN 543 Query: 477 HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL 536 ++ + +R+IARE + +A+PH E+ + L + + V+ + + ++ Sbjct: 544 IVSNEYKERVIAREQKAGTAFGGYIALPHAVDEKVNNVIVSYGILDKLIMVDGKEVGLII 603 Query: 537 IACAAADARHELKIFSYLASILCQ-----HPAEIIAGLTGYEAFMELL 579 + +++++ I + + + Y+ F E+L Sbjct: 604 LLVIPSESQNSQDIIVKTYQEIIDLSSDKKIVQKLIKSKNYKEFKEVL 651 >UniRef50_B0NY60 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY60_9CLOT Length = 543 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 73/543 (13%), Positives = 178/543 (32%), Gaps = 53/543 (9%) Query: 92 TPRAQLASALNLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLL 150 +LA L L + + L ++ E L + G G+ + E + + L NL+ Sbjct: 1 MTTQKLAEKLFLSVPTMLKVLKECEEWLEVYHISLVNERGKGYRLKSEENEYRVALKNLI 60 Query: 151 --------RKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQ- 201 K+ + I ++ +N+ + + LI A + + Sbjct: 61 MMKKPGEEIKENIDYFFSNIDVSAIRKCIIQTENEWDYHFTDESFYEILIYCCIAYKRKE 120 Query: 202 -----LTDEWPQYPGDEIKQ--------IVEHSGLFLGDNAVRTLTGLIE---------- 238 ++D +P+ K I E + + + Sbjct: 121 LALPLVSDYFPEELKILKKYNEYAFTVAIFEKLEEVFHVHFLIEDVLFLSIQILCSKFIG 180 Query: 239 --------KQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVW 289 Q ++ D V +L+ + I +++ D ++ E++ HL + + Sbjct: 181 ISDVDVTLSQVKKYDNKLVDFVDRMLKVIRDILDVDLTSDEKVKESLIIHLRPTIFRLRY 240 Query: 290 IAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNE 347 + + ++ +K + F S L E + + + + I LY A+ER +++ Sbjct: 241 GTPQKNALIDFIKKEYKNVFRASWAISILFEEYYGLQITEDEIGYIVLYIQAAIERKKHQ 300 Query: 348 RQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLD 407 + +++ + + + I++ V I S+ + E ++I D Sbjct: 301 YRTVMVSNFNMGHTQLVKEKIKKSVPEIDEIKFVSIHDFKIADYEDYDIIISTEERKEKD 360 Query: 408 DAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAP----GSFHYSNVRGESWQH 463 + + N + + + I F ++++ ++ + Sbjct: 361 KRIVVIPNILNETGISTLRAHLDNMNFIMIENATPFSPECFILFSPEFIFTDLEVKTKEE 420 Query: 464 ITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQ 523 + + + +H +T D ++ RE + I N +++PH + L Sbjct: 421 CLKIMSQAMEEKHVVTEDFYDSVMDRESKTTTTIGNGVSLPHGSPTAVNESKVGIAILKN 480 Query: 524 PVEVNNEVINHVLIACAA---ADARHELKIFSYLASIL--CQHPAEIIAGLTGYEAFMEL 578 P+ +NE + V + D +++F L + E + + + Sbjct: 481 PIMWDNEQVQVVFLLAFRLSTRDEISRIQMFYKEYVTLIDSEEKLEKLKSMKSNIELYKY 540 Query: 579 LHK 581 L + Sbjct: 541 LIQ 543 >UniRef50_A9QSG5 Transcriptional antiterminator, BglG family/Fructose-specific PTS system, component IIA n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSG5_LACLK Length = 648 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 94/635 (14%), Positives = 214/635 (33%), Gaps = 63/635 (9%) Query: 4 ERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAGYQ 60 +R I++ L + P T L++ T VSGRT+ DI +N ++ + +F GY Sbjct: 17 QRLDDILNYLITQSSPVTLDALSKLTKVSGRTVRSDIKSINELISKQGAEVFLIRKKGYL 76 Query: 61 LEIFERRSFFQLLQKHDN------------DDRLLALLLLNTFTPRAQLASALNLPETWV 108 L ++ F D L L ++F + L S L + + Sbjct: 77 LSYHNKKIFEDFWNNKDTGTFLFTSSESRIQYLLRLFLTSDSFITQDFLLSVLFVSTNTL 136 Query: 109 AERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 +K + ++ LG+ ++ E + + L+ ++ L + Sbjct: 137 YNDFRTVKHLLADYQLSIVNKSNLGYRLEGEEIDIRMAINQLIFQE-NLTDFITASNTRE 195 Query: 168 QHLSTACDNQH----------RWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQI 217 + L D Q + DY + L E ++ Sbjct: 196 KDLCLNIDFQKFSFFFEKYLNKIVQKDSDYFHKNAFSGILLSFSRIKEKKIINNFDLNPS 255 Query: 218 VEHS----------------GLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQR--- 258 ++ + + + R + L+ + + + LL + Sbjct: 256 LKEKVKKAILDFLRASEDEFKIVIPEVERRYIIYLLTENFPSLLFDNNNKENMLLAKQIV 315 Query: 259 ---VPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHR----QSSMNNLKAAWPAAFDM 311 + L L E + L+ + I + + ++ +K +P F++ Sbjct: 316 SDVTFDLFQLTKSRWTLDEGLKLSLIDHFNRLLNIHQIKSTRNNPILDVVKNDFPYPFEL 375 Query: 312 SLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPI-ILLSDQNAIATINQLAI 368 ++ + + ++ D+ L + + I LYFA A+E + I ++ +++I + I Sbjct: 376 AISQVQKIEKRYDVSLTEDEVSYIALYFASAIENSNDNVLTIAVVCGTGKILSSIIEGRI 435 Query: 369 ERDVL-NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQ 427 + I S E + + + +++ + A N I N + Sbjct: 436 RKKFPYTFSEIKKLSYLEYEELENKNKYQIVVTTIQNK-NLAQKNVIFFDNSNLNKSFKN 494 Query: 428 IKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 I+ + + R F+ S +S + + +I L +T D ++ Sbjct: 495 IEKRIKEINLITISNRHFNP--SHFMVIEEKKSKETVLEEISNILYKDKSVTIDFFNDLL 552 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNE-VINHVLIACAAADARH 546 ARE +I + +A+PH ++ + F + + +E + + + + ++ Sbjct: 553 AREELSSTVINDSIALPHPLNDSVIKSTIFVAVVPRGLEWDENTNVKFIFLLAIKSNEVE 612 Query: 547 ELK-IFSYLASIL-CQHPAEIIAGLTGYEAFMELL 579 EL+ ++ L + E + Y + + Sbjct: 613 ELQNVYDTLLDFIYSNDKQESLIKNPNYNNLLNIF 647 >UniRef50_B4U065 Transcriptional regulator, BglG family n=5 Tax=Lactobacillales RepID=B4U065_STREM Length = 680 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 103/682 (15%), Positives = 204/682 (29%), Gaps = 105/682 (15%) Query: 1 MLNERQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAG 58 M++ + + I+ L Q + EL+ +T + R I ID LN L +G Sbjct: 1 MVDSKAVVILMTLMTYQDLSLYELSVKTKFTIREIKDRIDELNDFLAQHELSELQATRSG 60 Query: 59 YQLEIFERRSFFQLL-----------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 Y++ + L Q + L F + L + + Sbjct: 61 YRISQQLKAESDHLFTLINAEQVYLSQAERINLIYLYTFCRRDFVSNSHYQDFLKVSKNT 120 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVI----LLANLLRKDPFLIPLAGI 162 + L+Q+ L G+ + E + ++A LL+ L L I Sbjct: 121 ALTDIKALRQKLADVDLELRYTRASGYTLVGDELDKHRLALAMIATLLKSPIGLWALDYI 180 Query: 163 TRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYA------------------------- 197 +S + Q +S ++ + A Sbjct: 181 LASWHYQVSFEALEKRVSHFYQTFQMSPILDRLQACLYAFIFILCRYQRRVDRVKQRPVV 240 Query: 198 LRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTL--TGLIEKQHQQAQVISADNVQGL 255 + QL + ++Q+ LF D A L G E + + + Sbjct: 241 VSEQLDQLTALLVSEIMQQLSLRYQLFEADEAYFQLLLAGCFEGEGTVSDDFFESLTAAI 300 Query: 256 LQRVPGIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 + ++ G+A L+ QL E++ HL+ + +K ++ FD+ Sbjct: 301 VDQMQGVALLSFSQSDQLKEDLKRHLIPAYYRLRYGLPSDNDYTLRVKDSYSELFDLVKQ 360 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERH-----QNERQPIILLSDQNAIATINQLA 367 + L ++LD P+ DS+ L+F L++ + + +I+ + + + + + Sbjct: 361 SLEPLAKELDSPIPDSEIAYFVLHFGGYLKQQGKDFHRQAYRAVIVCPNGVSSSLMIKEH 420 Query: 368 IERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQ 427 ++ + L +L + E L+ + V I+T Q Sbjct: 421 LKLLFPDIAFRGLSRLDQLGQLDESCYDLVFSTIRLETDK----PFYLVPMIMTDEQAFQ 476 Query: 428 IKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQ------------------------- 462 + + F S + Sbjct: 477 LVSLVNRDFPDIGYRLEVEELLHLISSYAVIHQKEKLRFALQQYLRQDVKRKDIRPVLQD 536 Query: 463 -----------------HITRQICAQLVAQHHITADEAQRIIAR-EGEGE-NLIVNRLAI 503 L+ I A + +IA+ E G + +AI Sbjct: 537 LITKKTYQSTSEQLGWREAIYLAAQPLLESGQIQASYPEAMIAKVEEFGPFINLGKGIAI 596 Query: 504 PHCWSE-QERRFRGFFITLAQPVEVNNEVINHV--LIACAAADARHELKIFSYLASILCQ 560 PH E + + L P+ + ++ + LI AA D LK S L +IL Sbjct: 597 PHARPEDGVNQVGMSMLVLEHPIYLLDDPKQEIRLLICIAAIDNETHLKALSRLTTILRD 656 Query: 561 HPAEI-IAGLTGYEAFMELLHK 581 + + +E ++ + Sbjct: 657 NEQVKALLASKSFEDIKTIIAE 678 >UniRef50_B0MGN0 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGN0_9FIRM Length = 679 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 90/674 (13%), Positives = 205/674 (30%), Gaps = 96/674 (14%) Query: 2 LNERQLKIV-DLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGY 59 +++R +I+ LL E++++ +S R + + I LN LN S G Sbjct: 1 MDKRSNQILNQLLAGGRLQLAEISEKYQISERIVRKKIRELNDELNESGLPSVSINGEGI 60 Query: 60 -QLEIFERRSFFQL-------------LQKHDNDDRLLALLLLNT-FTPRAQLASALNLP 104 + E+ E Q+ L K++ L LLL + A ++ ++ Sbjct: 61 LRFEVREEGLLEQIQTFIMNNDFYTYHLSKNERKTILAMLLLNQEKYVTAAWISEYISTS 120 Query: 105 ETWVAERLPRLKQR-YERTCCLASRPGLGHFIDETEEKRV----ILLANLLRKDPF---- 155 V L LK + L S+ G+ ++ +E LL L ++ + Sbjct: 121 RNTVISDLNDLKDWFLKHNMKLVSQVQKGYIVEASEGDIRSGMLKLLELNLDEEKYGAMG 180 Query: 156 ---------LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW 206 L + R + + S + + L ++ Sbjct: 181 AFHVFGHLLLKEIQYQGRYETIQKVLREEELRHDCFLSDFSFSVAVYELLILAERVKKGK 240 Query: 207 PQ------------------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQA---- 244 + ++ E L + + ++ Sbjct: 241 TLEQERQPDWENASLSSKYPLSRAVLDRLAEEFSLDIPAAEAENFVFCLRRKSYLKSGTN 300 Query: 245 ---QVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNN 300 Q++ + ++ R+ +N D L + + H+ + Sbjct: 301 NVDQLVIPVLIGEVIYRIISRFRINFYLDFALYDLLVDHMKSSVYRMSSGEVLENPFRGE 360 Query: 301 LKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQP------II 352 ++ +P F + L + L + + + + +YFA LER + ER ++ Sbjct: 361 IEKGYPEVFCTVEECLKPLEDYLGVKVPRDEVSFLVMYFASMLERDKLERMRERKVPAVL 420 Query: 353 LLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNN 412 + + + +++ + RS EL + + L+I + D + N Sbjct: 421 VCAMGRGTVQLMLAKLKQLEDVLEITDVRSSHELKDMGNINDQLVISTVAFP--DGEIKN 478 Query: 413 YITVKNIITAAGIEQIK-------------------HFLATAFIRQQPERFFSAPGSFHY 453 + V ++ I +I+ FL ++ Sbjct: 479 ILMVSPLLEQEDIYRIRRKATKLRENWSGGQTAETGKFLKKQKKAERNSLGAMLSADRIA 538 Query: 454 SNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGE--GENLIVNRLAIPHC-WSEQ 510 +SW+ R L +T + + ++ +I + +A PH + Sbjct: 539 LKQEAQSWEEGVRAAGRLLYESGAVTYEYIEAMVENIKVNGSYVVIYSGIAAPHAEQEKG 598 Query: 511 ERRFRGFFITLAQPVEVN---NEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIA 567 R ++L +PV N+ +++++ I++ + + I Sbjct: 599 AVREAASLVSLKKPVVFGNSENDPVSYIIGLSILNSNSINCAIYNLVRLFSQEEAKSRIE 658 Query: 568 GLTGYEAFMELLHK 581 E +E + + Sbjct: 659 AQQSPEELLETIRR 672 >UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42D0A Length = 713 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 99/710 (13%), Positives = 207/710 (29%), Gaps = 141/710 (19%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAG 58 L+ R+ I+ L + Q T E+A + VS RTI RDI + L + G Sbjct: 3 LSARERHIIQYLIEAEQGITIKEIADRLNVSTRTIHRDIQGIEQMLTQYELTLERQSGVG 62 Query: 59 YQLEIFERRSFF--QLLQKHDNDDR---------LLALLLLNTFTPRAQLASALNLPETW 107 +L + + +L+ + + ++ L LL LA + + Sbjct: 63 LKLTGRDTKKIELKELITESEPNEYTPWERQQLLLSILLQEREPVKLFTLAKEIGVTIAT 122 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 ++ L ++ + + + G I E K+ + L L+ L I Sbjct: 123 ISNDLNKINDWLQSFDLEMVRKRSYGIEIQGDEPKKRMALRRLITDKVSEEELVSILESY 182 Query: 167 L------------------------------------------------QHLSTACDNQH 178 HLS A D Sbjct: 183 RLKSELGEQASEKLLYLIDLNVILKVLETLHELRRDGEPIADVSYVGLAVHLSLAVDRIK 242 Query: 179 ---RWPLMQGDYLSSLILAIYALRNQLTDEWPQ-----YPGDEIKQIVEHSGLFLGDNAV 230 + + L Y +L + + P E+ + H + Sbjct: 243 RGEKIEKHSEGFEKVLKTNEYEAAKRLVKKLEETFSIDIPQIEVAYVAMHLLGAKQGDDG 302 Query: 231 RTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLN-IIDAQLVENITGHLLRCLAAPVW 289 Q+ + A + L++ V + I D L+E + HL L Sbjct: 303 SFFF-------QETSLDIAMRAKKLIEAVGVRTEVALINDHSLLEGLISHLKPALFRMEQ 355 Query: 290 IAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNE-- 347 + S + +K + F+ + + P + + ++F A+ER + + Sbjct: 356 GMKIYNSMLPAIKEGYAPLFNTIKECVVEIFPTWSFPDEEIGYLVMHFGSAIERSKKKAV 415 Query: 348 RQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLD 407 + I++ S + + +E+++ + I S ++ + ++I +D Sbjct: 416 IKAIVICSSGIGTSKLLATRLEKEIPEIQGITHMSAFDITQDQIPDHTVVISTVPLMSID 475 Query: 408 DAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPG------------------ 449 Y V ++ +++I+ ++ + + A Sbjct: 476 ----PYFLVNPFLSKKEVDRIRQYIHSYNWNPNNKTKEQAADAKEVSKMEHQIDAESASD 531 Query: 450 ----------------------------SFHYSNVRGESWQHITRQICAQLVAQHHITAD 481 S ES + Q+ + Sbjct: 532 DKWAKETVLSELGHIEQLSSLINSVLSHFKLKSWPVCESLNELIIQLAKDQEDSSLVRNS 591 Query: 482 EA--QRIIAREGEGENLI-VNRLAIPHCWSEQERRFRGFFITLAQPVEV------NNEVI 532 E ++ RE G I LA+ H S+ L + + + + EV Sbjct: 592 ELVADALMKREELGGLAIPGTTLALFHTRSDAVDIATFTVHELEESMLLRGMDNEDTEVK 651 Query: 533 NHVLIACAAADARHELKIFSYLASILCQHPAEIIA-GLTGYEAFMELLHK 581 +L+ R L++ S++++++ + I + LL K Sbjct: 652 RILLMLAPLEWNREGLELMSFISALVIESSESIRQFETGDEQEIFTLLEK 701 >UniRef50_B7C836 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C836_9FIRM Length = 633 Score = 201 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 85/628 (13%), Positives = 224/628 (35%), Gaps = 51/628 (8%) Query: 1 MLNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ML RQLKI+ L+ P E+++ VS RTI +I ++N I +S GY Sbjct: 1 MLTARQLKIIKLIMNNPGIHGKEISENLNVSTRTIRSEITFMNDV-TNCILIRSSTKQGY 59 Query: 60 QLEIFERRSFFQLLQKHDND--------DRLLALLLLNTFTPRAQLASALNLPETWVAER 111 + ++ + + + +++ +L L+ L L ++ + + Sbjct: 60 MINDEHLDIIRNIVNQDNENVDLAVYRIYKIIGKILFFEDCSIYDLSELLGLSDSVIRKE 119 Query: 112 LPRLKQRY--ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDP--------FLIPLAG 161 + ++ Q L I E + LL +++ ++ + Sbjct: 120 INKVIQFLLKNYNVELFKLKKDECVILLEESEIRELLFKIVKDMALENPDALMDILYMLL 179 Query: 162 ITRDNLQHLSTACDNQHRWPLMQGDYLSS----------LILAIYALRNQLTDEWPQYPG 211 +++ + ++ + + YLS LI + L ++ Sbjct: 180 SDSWVMKYYKSTKEDVIKIMNGEQVYLSETDLSIFAACILICRVRNLNGYNLEDNQISSP 239 Query: 212 DEIKQ-----------IVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVP 260 D++ +E + + + N + T + + + V Sbjct: 240 DDLYTRVITKLCMQSSYLEQADIPILYNLLHTFKIKSTDEVPKITDFTVLVFDEFCNEVF 299 Query: 261 GIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 S+N+ +++ L + H+ + E + ++++K +P AF++S+ + +L Sbjct: 300 DKYSINLKESEALSSKMLLHIEFMNRRVIGGYELKNPIVDDVKTKFPFAFEISMMIVPIL 359 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRV 377 + + + + + + +Y A LE + + I++ S ++++ + +E N Sbjct: 360 FKYKRVYVTEDEISYLTVYVAQFLENENVKLKTIVVTSQRHSVKQLLTQWLEMYFKNQIA 419 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFI 437 I+ E + + L+I +L+ V ++ + IE++ + + Sbjct: 420 IVDIINKEALKKMDLTPIDLVITLDSFLILKDV-EVFSMDKLPEIKDIERLNSMIHMIRM 478 Query: 438 RQQPERFFSAPGSFHYSNVRGESWQ--HITRQICAQLVAQHHI--TADEAQRIIAREGEG 493 ++ + + V ++ + + +++ +L I T + ++ RE Sbjct: 479 NKRVSKILDCYIQKEHVKVYPDTKELSELLQEMSQKLHESGFISDTKGFYEDVLLREKNY 538 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY 553 + +++ +PH + L +P+E + + V + E+ + Sbjct: 539 PTNLGSQMMVPHALFTFADKTGIEVALLKKPLEHDGNQVQLVFLLALEKKRNDEMNLLFQ 598 Query: 554 LASILC--QHPAEIIAGLTGYEAFMELL 579 + + + + +AF++ L Sbjct: 599 FFNQIVSHKKYMHELLQSEDSDAFIKNL 626 >UniRef50_B2TRB2 Putative phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Clostridium botulinum RepID=B2TRB2_CLOBB Length = 628 Score = 201 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 81/626 (12%), Positives = 209/626 (33%), Gaps = 51/626 (8%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-G 58 LN+RQ I++ L + + T +A+ VS RTI D+D + + I G Sbjct: 4 LNKRQKDIINFLESKDEYVTIDCIAKFFEVSSRTIRNDLDSIEDLIKESNIILERKPRVG 63 Query: 59 YQLEIFERRSFFQLLQKHD--------NDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 +L + + +++ + D ++ L++ +LA +++ + + + Sbjct: 64 IKLILKNGQDIQEVINEQDYKVYSSDDRITVIILSLIIKGKVTIEELAKDVDVSKNTLVQ 123 Query: 111 RLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGI------- 162 + + E ++ + G I + EEK + ++ K + Sbjct: 124 DFKLVTAKLEEYDIQVSKKTYYGITIKDNEEKIRNVFFSIYSKLSDELKHDIKERLTQET 183 Query: 163 -TRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVE-- 219 +D++ ++ + + + L + I N+ + + + K + Sbjct: 184 NLKDSVIKEKIEKIEKNIGTVYSEESIEELEIIILLSINRYNNNFKIDYSEREKNSLIRR 243 Query: 220 ------HSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDA-QL 272 L L D + L + + + + Q +L + +++ + + Sbjct: 244 REFSVLKEILSLDDLEICYLLKISDGSRRAVGGKVNNITQEILDELCKTLNIDCSNDLEF 303 Query: 273 VENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD- 331 I HL + + +K + ++ ++ + + + + + Sbjct: 304 TSQIAMHLKVAIHRIKNNLVIENPMLEEIKYKMSFIYQITETILSSKEDIIGVKFPEEEI 363 Query: 332 -LIGLYFACALERHQNER---QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELV 387 + +YF ER+ + + +++ + A +++ ++ I + + L +L Sbjct: 364 AYMAMYFDAIFERNIKSKFTYKILLVCNGGLATSSLLKVRIGAMLPELEIKNVCRLKDLD 423 Query: 388 AIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSA 447 E + I++ D I V ++ + +++IK + + E Sbjct: 424 KELENTDIDFIVSTIPVKADK--YKVIKVNPLLDNSDVDKIKTEIYNKRYEKNCEYLIDL 481 Query: 448 PG-------------SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EGEG 493 +V + W+ LV ++ IT D ++ II E G Sbjct: 482 VKSDNESEIIKLLPQDVTQLDVDIDDWKEAIEIATKPLVNKNKITKDYSKEIIKVIENLG 541 Query: 494 -ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFS 552 + + ++A H + +TL ++ ++ V A+ + + + Sbjct: 542 NYMVFIPKVAFVHATPDNVLENSMALLTLKSEIQFGSKNKVPVKAMVVLANKTENMNLVN 601 Query: 553 YLASILCQHPAEIIAGLTGYEAFMEL 578 L I E Y+ + Sbjct: 602 LLEIITKGDNIEKFKNAANYDEIKSI 627 >UniRef50_B6FXG1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FXG1_9CLOT Length = 641 Score = 201 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 85/633 (13%), Positives = 199/633 (31%), Gaps = 64/633 (10%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 LNERQ I+ L ++ T E++++ VS RTI D+D + + L +I + Y Sbjct: 4 LNERQNSILKYLYNKKDYTTINEISKEFKVSVRTIRYDLDNIEYMLKDNDKISLVRTPRY 63 Query: 60 QLEIFERRSFFQL----------LQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 +++ + L + ++ +A+ LL + +LA+ L++ + V Sbjct: 64 GIKLEFKGKRDILTFSSIFDCVEINSPEDRVIFIAINLLIGNSKVEELANMLSISKNTVV 123 Query: 110 ERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK-----DPFLIPLAGIT 163 L + K+ + S+ +G I+ EE NL K + L+ + Sbjct: 124 SDLKKAKEILNNLRINVISKAYVGTCIEGDEEDVRYAFINLYYKISNADNYKLLKMIIDD 183 Query: 164 RDNLQ---HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEH 220 D+++ LI+ I ++ + +E E Sbjct: 184 FDSVKNDIEERIHKVENKLSLEYSDTSFKELIIIIMYCFMRMGEYSNFNYSEEYIHEKEQ 243 Query: 221 SGLFLGDNAVR--------------------TLTGLIEKQHQQAQVISADNVQGLLQRVP 260 F + I + + +++ + Sbjct: 244 EEEFEAIQYAFADKTEDKKEICYLMKWFKSAKVMSFINDKSDVKMDGNKYLAMRIIEDME 303 Query: 261 GIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 ++ D V ++ H + + ++K + ++ + Sbjct: 304 KYTGIDYSNDFDFVNSVVMHFSVAMYRMQNNFKIENPLKEDIKMRLGIIYQITEDVMKKY 363 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQNER---QPIILLSDQNAIATINQLAIERDVLN 374 ++ + D + + ++F A ER E + +I+ + A A + +E + Sbjct: 364 ESEIGVEFPDDEVSYMAMHFGAAFERKTQEIFDTKALIVCNSGLATAGLLSARMEVMLPQ 423 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 +V L+ L + + +II+ + + Y+ V ++ + ++K Sbjct: 424 IQVEGVCRLNNLEEELKNKDVDIIISTV--PIRNTDIEYVEVNPMLNIDDVLKLKKLAFN 481 Query: 435 AFIRQQPERFFSAPGSFHYSN-------------VRGESWQHITRQICAQLVAQHHITAD 481 + E S S+ ++W+ + L+ I + Sbjct: 482 NVYEKSSEYLVSKYKGDKVSSVAEIIKKSNAAFLYDADNWRDTIAEASKPLIKSGAIKEE 541 Query: 482 EAQRIIA-REGEG-ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIAC 539 +I E G + + +A H ++ +TL + + + Sbjct: 542 YVDDMIKAIEDLGTYMVFIPEIAFVHASNKNVVNNAVSMLTLKNEIYFGDNSEVRIKSIV 601 Query: 540 AAADARHELKIFSYLASILCQHPAEIIAGLTGY 572 A+ + + + + AE Y Sbjct: 602 VLANKDENKNLIELINILTKNNNAEKFKNAEKY 634 >UniRef50_Q180U6 Putative transcription antiterminator n=5 Tax=Clostridium difficile RepID=Q180U6_CLOD6 Length = 633 Score = 201 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 83/627 (13%), Positives = 197/627 (31%), Gaps = 51/627 (8%) Query: 5 RQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGSAGYQL 61 R+ I++ L+ A + GVS RTI +I + GY L Sbjct: 2 RERIILETLKNSSGYLNIDYFADKLGVSTRTIRNEIKKIETIKECNGFKLEYKSKLGYIL 61 Query: 62 EIFERRSFFQLLQ----------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAER 111 I ++ F L+ + + ++ LL+ + QL+ + + + Sbjct: 62 NIKDQDKFEHYLRNLPSDLVENPEQRLESIIVELLVNEGYKTIEQLSKKFLVSSSQIKND 121 Query: 112 LPRLKQRYERT-CCLASRPGLGHFIDETEEKRV-ILLANLLRKDPFLIPLAGITRDNLQ- 168 L ++ ++ + T L + G I+ + ++ IL+ + R + + DNL+ Sbjct: 122 LKKIDEKIKDTELKLERKAHYGIKIEGSIKEIQSILVDSYFRGNRNITEYRNKFIDNLKL 181 Query: 169 -HLSTACDNQHRWPLMQ------GDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHS 221 ++ + N ++ + L+ +I+ + ++ I++ Sbjct: 182 ANIRSTIKNVLNEHDLEANLTELEEILAQIIILYIRVSMRVAGNASDLKLYTEDLIIDKL 241 Query: 222 GLFLGDNAVRTLTGLIEKQ----------------HQQAQVISADNVQGLLQRVPGIASL 265 + + L + + D + + + + Sbjct: 242 LDKIFRDKKYNLNYDEKYYLKELIKLKTKDKKATIKNIDKNKLQDIMFEFFREIDKKYNS 301 Query: 266 NI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD 324 N D + H+ + + + +P F++S+ F ++ + Sbjct: 302 NFLEDKEFFNLFYLHIACLIERIKKNHKIINPFSVKISQQYPTVFNLSIQFSKIIENEYH 361 Query: 325 IPLFDSD--LIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIERDVLNCRV 377 I + + I + A E+ + + I+ S A + L ++ N + Sbjct: 362 IKISQDEIGFIATHIAVPFEKREEANFNKKYKIAIICSSGGGSAFLINLRLKEIFPNAEI 421 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFI 437 L E I + + I N + ++ V + + + I++ F Sbjct: 422 RNFSLLEEKAVIEFAPDLIFSITNLLFEINAPVILINEILDELDYLDIKESVRFADHIGN 481 Query: 438 RQQPERFFS--APGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 P+++ + ++ I + +V + + + + RE Sbjct: 482 ISSPKQYILGLFDKNHFRCIKDKAKYKDILDSMSKCIVDEGACSPTYPKDVWERESYLST 541 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIA-CAAADARHELKIFSYL 554 + N +AIPH + + + N V + + + +I YL Sbjct: 542 IYTNGVAIPHPIEMTGNKNIISVALIQTDIIYENRVPKIIFMISLIKGNLELHKQISKYL 601 Query: 555 ASILCQHPAEI-IAGLTGYEAFMELLH 580 + I+ + YE FM L Sbjct: 602 SKIMANKDMVDMLNKSQSYEEFMYKLK 628 >UniRef50_C0CZN4 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZN4_9CLOT Length = 339 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 103/326 (31%), Gaps = 8/326 (2%) Query: 263 ASLNIIDAQLVENITG--HLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 L+ L+ H + E + ++K +PA F +++ Sbjct: 12 IGLDFTGDTLLRQTLNWYH-RSSALRCRYGIELENPFLEDVKKTYPAVFSACFAAGSVIY 70 Query: 321 EQ-LDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRV 377 + L +++ + L A+ R + + +++ + + I + + + Sbjct: 71 PRVTGEELSENEVSYLSLLIGGAIVRSEKKISAVVICNGGVGTSQILARKLRDRLPQLMI 130 Query: 378 IIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFI 437 + ++ L+I S V + + + T Sbjct: 131 LGIFGSEQVREAARLRPQLVITTVSGIQTPCPSVLISPVLGERDLKLLNRACAEVYTKAE 190 Query: 438 RQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI 497 + + +G + R + L + ++T + ++ARE G + Sbjct: 191 TCRNGLAGLLDEDLIVLDYQGRDKDQVLRFMAEGLEQKGYVTEQFLEDVMARESRGSTAL 250 Query: 498 VNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY-LAS 556 +AIPH S R + L + ++ E ++ + + + F Sbjct: 251 GFGVAIPHGVSGYVNRPAVSVVRLEESMDWAGEPVSLIFMLALNFKDIESTRAFFNGFYH 310 Query: 557 ILCQ-HPAEIIAGLTGYEAFMELLHK 581 + C+ E++ G+T + ++ + Sbjct: 311 LTCEVKIVELLRGVTSPGELIRVISE 336 >UniRef50_C0QXV4 Transcriptional antiterminator , BglB n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QXV4_BRAHW Length = 620 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 80/614 (13%), Positives = 208/614 (33%), Gaps = 44/614 (7%) Query: 7 LKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-GYQLEIF 64 +I+ L T L++Q VS +TI + +N+ L S GY+L Sbjct: 7 KEILSSLSADSYITAEALSKQLNVSEKTIRTKVREINYELQKLNIKIESKPRYGYKLICD 66 Query: 65 ERRSFFQLLQKHDNDDRLLALL---------LLNTFTPRAQLASALNLPETWVAERLPRL 115 +F + + ++ + + + + + + +L++ +T + L + Sbjct: 67 NYDNFKSMDFLSNINNDMDYRIRIIFKYLIEINSEYIKADDICDSLDISKTTLTNILKIM 126 Query: 116 KQRYE-RTCCLASRPGLGHFIDETEEKRVIL-----LANLLRKDPFLIPLAGITRDNLQH 169 + + L RP G + E L + L ++ L GI + L Sbjct: 127 EYNLKYHNLKLERRPNYGIRLIGNEFDIRNFIICNYLNDFLYENNMNEKLIGIIINFLNK 186 Query: 170 LSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNA 229 + +Q +S + + + +EI+ E + Sbjct: 187 YEIKFSEINLENFIQYINVSISRIKNNNFICSYEKDIIKDISEEIRLSEELIKQIQNEID 246 Query: 230 V----------------RTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLV 273 + + L + E + Q +D + +L V +++ + + Sbjct: 247 IEFNDTEIIFIAIHIASKNLFSINENYNSVIQDKFSDIIDKMLDMVYKNLKIDLRNNFNL 306 Query: 274 ENIT-GHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD- 331 + H++ + + +N++K + +F ++ + +L++ + + + + Sbjct: 307 ILLLNQHMIPLDIRIKYNIFQKNPMLNDIKNNYSLSFLLASESVAILKDYYNKDISEDEI 366 Query: 332 -LIGLYFACALERHQ---NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELV 387 + L F LE N+ +I+ + + ++ N I + Sbjct: 367 GYLALLFQIGLEETVESINKMNILIVCGSGKTTSNLLVTKYRKEFNNYIENIYAEDLMGL 426 Query: 388 AIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSA 447 + + + + + + + + N + + I +K+ + E + Sbjct: 427 KDFDFSKVDYVFSTVPINVKLPI-PIVYISNFLKSDDIINVKNTFESLNRNIILEYYK-- 483 Query: 448 PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCW 507 + ++G++ + I + IC+++ +I + + ++ RE E I N +AIPH Sbjct: 484 -EEMFTTYIKGDTKEEIIKNICSEIKKYKNIPDNFYELVMKREQLAETDIGNLVAIPHPI 542 Query: 508 SEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLAS-ILCQHPAEII 566 + + L +P+ + V + + + Y + +L + + + Sbjct: 543 EVVTKDTFVYVAVLDKPILWQKNNVQVVFLISVSNKNDDLKNFYQYTTNFLLNESSVKKL 602 Query: 567 AGLTGYEAFMELLH 580 +E + LL Sbjct: 603 IENKTFENLIFLLK 616 >UniRef50_Q9KGB4 BH0193 protein n=3 Tax=Bacillus halodurans RepID=Q9KGB4_BACHD Length = 683 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 79/676 (11%), Positives = 193/676 (28%), Gaps = 96/676 (14%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAGY 59 LNER KI + P +L + ++ R + + +N L G+ Sbjct: 3 LNERSQKIFKKILNNPDINSKQLKKAFHLTRRQLSYSLTKINEWLREHQLPEIERTRQGF 62 Query: 60 QL-----------EIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 L ++ + L K + +D LL +L+ + S L + + + Sbjct: 63 FLVDQKVYSSVTGDVNNPPAPQPYLSKAEREDLLLLMLVSSDDLSLHHFTSELAVSQNTI 122 Query: 109 AERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRK--------------- 152 L +K + G+++ E L+ +L K Sbjct: 123 LSDLKTVKTFLAECDLTIRYSRKFGYYLHGNEFNIRRLIFHLTCKWLTMGDGASRIQRVA 182 Query: 153 ---DPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQY 209 + L Q L+ +++ + L + + L N+ + + + Sbjct: 183 GITKEEVGELKRRIHTLEQKLNLTFTDENIQSMPYTLLLILKRIKLGRLINRFSIHYEEL 242 Query: 210 PGDEIKQIVEHSG----LFLGDNAVRTLTGLIEKQHQQAQVISADNV-------QGLLQR 258 + E + + L+ ++ + V +L+ Sbjct: 243 SDTKQYHATEELLSGFEEIPREERLFITLYLLTTNVYWSKTSTEGQVPNLLPALVDMLRL 302 Query: 259 VPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 A + + + + L+ + H+ + + + + + + Sbjct: 303 FEKRACIALQEKEQLLTKLLLHVNPAYYRIKYQLTEMSKTSTKISEEYKELHHLVKQSMK 362 Query: 318 LLREQLDIPLFDSD--LIGLYFACALERH----QNERQPIILLSDQNAIATINQLAIERD 371 L + + + +++ + L L R Q + + I++ S +I+ ++ Sbjct: 363 PLETLIGVEIPENESSYLTLLIGGWLTRQGDSIQKKTKAIVVCSKGVSISRFLLSELKEL 422 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAV--------------------- 410 + + + SL E + + + Sbjct: 423 FPDFIFLDSLSLREFAIYPLNYDLVFSTIPLDTTKKLFLTSSILEREEKKRLKEQVMFYL 482 Query: 411 ----NNYITVKNIIT--------------AAGIEQIKHFLATAFIRQQPERFFSAPGSFH 452 I V +I+ A + + + A + P + Sbjct: 483 RGYSPPDIKVDDILEIVNNYAVITNEQELANDLYRYIYRDQKAPTKSGPINTLATLPDLI 542 Query: 453 YSNVR-----GESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCW 507 SW+ L+ + I+ + ++ E + +I AIPH Sbjct: 543 TVRHITMRDAVASWEEALHIASQPLIDEQKISPTYVEAMVDNERDPYIIISPHWAIPHAA 602 Query: 508 S-EQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASIL-CQHPAEI 565 + + L + V + H+++ AA D + LK L + + + Sbjct: 603 PDKGVYDVGMSLLHLQKGVSFTADEKVHLMVVIAAVDKQKHLKALMQLMKLAGSKEARKA 662 Query: 566 IAGLTGYEAFMELLHK 581 I T + +++ + Sbjct: 663 IEQSTSEDEIFKIIKQ 678 >UniRef50_B6G892 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G892_9ACTN Length = 499 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 61/498 (12%), Positives = 149/498 (29%), Gaps = 26/498 (5%) Query: 94 RAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKD 153 LAS L + E + + R + + G+ + + + L Sbjct: 3 LVDLASELAVSERTIQRHITRTNEELSDLAHIERLNQGGYRLVIEDG---EAFSRYLDGH 59 Query: 154 PFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE 213 + + + +L + W L +L A++ R ++++ + Sbjct: 60 ATSPAMPESPDERVYYLLNDLCTREDWVT-----LDTLAGALFVSRRTVSNDLREVEKRL 114 Query: 214 I-KQIVEHSGLFLGDNAVRTLTG--LIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDA 270 ++ S + G T L + V G+L V + + Sbjct: 115 ASFRLTLESKPYRGIRVTGTELDKRLCLASTPLITDGVWNVVAGMLDAVYQAYRFDFRND 174 Query: 271 -QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF- 328 +L N+ H+ L + +++ +P A+ M++ L++ + Sbjct: 175 LELRMNLARHVAPLLVRLSYGLSVDNPLTEDIRMRFPLAWSMAVDASQALQQMSGATVDM 234 Query: 329 -DSDLIGLYFACALER---HQNERQPIILLSDQNAIATINQLAIERDVLNC--RVIIARS 382 ++ I L FA A+ER +++ +++ + A + + ++ V+ Sbjct: 235 AETGYIALAFALAIERAGSSPSKKNILVVCASGAGSARLLEYRFKQQFGRYLNEVLTCDI 294 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE 442 + I+ + + V + + A + L T Sbjct: 295 AAVASCDWSAIDYVFTTVPLEAEIPVPVCQ---ISAFLDANDAGYVLEMLQTPAASCLLP 351 Query: 443 RFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLA 502 F + +V G S + ++ + + + + RE N +A Sbjct: 352 YFSP---ELFWPHVEGSSKDEVLTKMLDAVGVVKGMGDEFKASVRERERIAPTAFGNLVA 408 Query: 503 IPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQ-H 561 +PH L + + N + V + + + +A++L Sbjct: 409 MPHPVRACSDEPFVAVGLLDERIMWNAHEVQAVFLISFSDSIVDPDSFNAGMATLLTNAD 468 Query: 562 PAEIIAGLTGYEAFMELL 579 + +E +L Sbjct: 469 AIAELLRTRAFETLQAIL 486 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Query: 22 ELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQ------- 74 +LA + VS RTI R I N L+ A I GY+L I + +F + L Sbjct: 5 DLASELAVSERTIQRHITRTNEELSDLAHIERLNQGGYRLVIEDGEAFSRYLDGHATSPA 64 Query: 75 -KHDNDDRLLALL----LLNTFTPRAQLASALNLPETWVAERLPRLKQRYERT-CCLASR 128 D+R+ LL + LA AL + V+ L +++R L S+ Sbjct: 65 MPESPDERVYYLLNDLCTREDWVTLDTLAGALFVSRRTVSNDLREVEKRLASFRLTLESK 124 Query: 129 PGLGHFIDETEEKRVILLAN 148 P G + TE + + LA+ Sbjct: 125 PYRGIRVTGTELDKRLCLAS 144 Score = 44.6 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 3/69 (4%) Query: 3 NERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGS-AGY 59 +ER +++ L + T LA VS RT+ D+ + L S G Sbjct: 70 DERVYYLLNDLCTREDWVTLDTLAGALFVSRRTVSNDLREVEKRLASFRLTLESKPYRGI 129 Query: 60 QLEIFERRS 68 ++ E Sbjct: 130 RVTGTELDK 138 >UniRef50_B0MH65 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MH65_9FIRM Length = 693 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 102/693 (14%), Positives = 225/693 (32%), Gaps = 119/693 (17%) Query: 2 LNERQLKIVDLLEQ-----QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGS 56 +N+R +I+ L Q Q ELA+Q GVS RTI D++ +N L+ S Sbjct: 1 MNKRSREILSTLIQKKEYGQAAQMKELAEQFGVSVRTIRNDLEQINEFLSKNELSGVSLG 60 Query: 57 AGYQLEIFE----------RRSFFQLLQKHDNDDRLL--ALLLLNTFTPRAQLASALNLP 104 +E + R +F+ + + + L+ N + + LA + + Sbjct: 61 KQGVIETGKDINMARQYLFRDNFYSYKLEKNERKIFMATLLICENDYRTLSDLADCMYVS 120 Query: 105 ETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT 163 + V + L LK+ + + + S G ++ E+ + +LL ++++ + A + Sbjct: 121 RSTVIQDLESLKKFFRKHRLYVVSHSNKGLMLEGEEKNKRLLLFSMVKSSESVYREAPVF 180 Query: 164 RDNLQHLSTACDNQHRWPLMQGDYLS--------------------SLILAIYALRNQLT 203 + L C ++ L+L++Y +R ++ Sbjct: 181 ERLIGSLKEECRVDMEDLKTMEKVINLAEHFSGRFLTDTSFTDLKYFLLLSLYRMRLKIY 240 Query: 204 DE-------WPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGL- 255 E + G +KQ+ + +G+ + ++ V+ L ++ + + S + + Sbjct: 241 AEQDGKKNSKYEMAGYILKQLSDFAGIEVVEDEVKFLGRILNEMRYIKKTTSNQEIVKMQ 300 Query: 256 ------LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAA 308 ++ V LN+ D EN+ HL ++ + S + + +P Sbjct: 301 VITRTFIEHVSIDIDLNLQGDYIFYENLINHLESMFSSAIRD-NTVSSVVTEVLERYPKI 359 Query: 309 FDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSDQNAIATI 363 + + +L + + L + + I ++ A+ER++N I++ + + + Sbjct: 360 QKAVQNNVFVLEDYIGRKLNEVEISYIVVHICAAIERNRNSAERYSVILVCNGGIGTSQL 419 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 +++ N V +L + + +++ + D YI V ++ Sbjct: 420 LLARLKK-YFNFHVADIIPAHDLKNVAVDEADVILSTVAL----DTDLEYIQVDPLLNDG 474 Query: 424 GIEQIKHFLATA------------------------------------------------ 435 + L+ Sbjct: 475 DCINVGKKLSRLKGNRSTGKKQTKKEKPEAVHMKRIKEILTSDTDPEKMIFKIEEVVNEF 534 Query: 436 -FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EGEG 493 P NV ++WQ RQ L+ I +I E G Sbjct: 535 FHKEVSLPLAEMLPKQAIRLNVSCKTWQEAVRQSAQYLLENDCIEERYISSMIKNVEQNG 594 Query: 494 ENLIV-NRLAIPH-CWSEQERRFRGFFITLAQPVEVNN---EVINHVLIACAAADARHEL 548 ++V A+PH + ++ I L +PV + + V A H Sbjct: 595 PYILVAPGFALPHEALNAGAKKVGMSLIRLDEPVVFGKPEFDPVEWVCCLSAINKETHLK 654 Query: 549 KIFSYLASILCQHPAEIIAGLTGYEAFMELLHK 581 +F + + I + + + Sbjct: 655 AMFHLVNLFHNEKFRNKIRPAQSRDEVYNAIKR 687 >UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4E8_9FIRM Length = 654 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 80/645 (12%), Positives = 194/645 (30%), Gaps = 75/645 (11%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 +++R +I+ L QP T +LA++ VS RT+ +DI LN L + G Sbjct: 19 ISDRLEQILIALGEASQPLTSAQLAEKVKVSARTVKKDIGELNAILKDYDAAILARTGVG 78 Query: 59 YQLEIFERRSFFQLLQKHDN-----------------DDRLLALLLLNTFTPRAQLASAL 101 YQL + + + Q L + + + LL ++ + L L Sbjct: 79 YQLSVGDEFLYNQFLTELKRRELRTAQTVPKYRYERVNYIVKKLLTVDYYLTIEDLVDEL 138 Query: 102 NLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLR--------- 151 + + + L +++ ++ L SRP G + E + + +A Sbjct: 139 YISRSTLTADLKEVREIFKDYNLELISRPNYGILLVGEEIAKRLCIAEYFFHANVSTGYF 198 Query: 152 --KDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQY 209 + + + M L + ++ I + Sbjct: 199 AADNAMFVSSTNQDEIRFVRGLLEEIMEKYGIHMSDQSLQNFVIHIIIAIRRWKFYNYVK 258 Query: 210 PGDE-------------------IKQIVEHSGLFLGDNAVRTLTGLIEKQH-QQAQVISA 249 DE ++++ + + L + + +H + I++ Sbjct: 259 IEDENLGELRSSVAREWPAAQDLVRRLQDKLEILLPQEEILYFALHFKSKHITELDEITS 318 Query: 250 DNVQGLLQRVPGIAS--------LNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL 301 + ++ + + + I + I + E + H+ +A R + + Sbjct: 319 EEIEQVEKTLYDIYRMLQKRFGVIAINKDRYEEYLRMHIPAMVARLRSGLVMRNPMIYDF 378 Query: 302 KAAWPAAFDMSLHFITLLREQLDIPL--FDSDLIGLYFACAL---ERHQNERQPIILLSD 356 + + +++ +L + ++ + + + LY R + ++ Sbjct: 379 LNKYLFSTHITMMISDILEQNFNVRMNKNEFAYLVLYTNLLFSTESRPHGAKILVVCGRG 438 Query: 357 QNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV 416 + T+ E +I + EL + + LI++ V + Sbjct: 439 RPETITLINEINENHAALANMIEICDVGELE-NHDLHQAELILSTVPLQASYPVPSIYMD 497 Query: 417 KNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQH 476 + I+Q + + +++G + R++ Sbjct: 498 GRLSYGEQIQQS----IKHNRLSFRKLARYFSPRYFNGSLKGSVRDEVFREVAKAFDNWK 553 Query: 477 HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL 536 I A + E + + H + L +P+ N V+ Sbjct: 554 EILAMFWEA----EHILSHETTKGVVFLHTLKP-LPESFIYIGFLKKPIIWNKLWAQAVI 608 Query: 537 IACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHK 581 D + +++ ++ +T YE +E+L K Sbjct: 609 FVNINGDLDSLRLGYDFISEMINDPREPFSGKITEYEDLIEVLSK 653 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 54/406 (13%), Positives = 122/406 (30%), Gaps = 25/406 (6%) Query: 62 EIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYER 121 + + L+AL + AQLA + + V + + L + Sbjct: 7 ILLREEGKRMEYISDRLEQILIALGEASQPLTSAQLAEKVKVSARTVKKDIGELNAILKD 66 Query: 122 TC-CLASRPGLGHFID-ETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHR 179 + +R G+G+ + E L L R++ R + Sbjct: 67 YDAAILARTGVGYQLSVGDEFLYNQFLTELKRRELRTAQTVPKYRYERVNYIVKKLLTVD 126 Query: 180 WPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEK 239 + L D + L ++ L L + + ++ I + L I + Sbjct: 127 YYLTIEDLVDELYISRSTLTADLKEVREIFKDYNLELISRPNYGILLVGEEIAKRLCIAE 186 Query: 240 QHQQAQVIS------------------ADNVQGLLQRVPGIASLNIIDAQLVENITGHLL 281 A V + V+GLL+ + +++ D L +N H++ Sbjct: 187 YFFHANVSTGYFAADNAMFVSSTNQDEIRFVRGLLEEIMEKYGIHMSDQSL-QNFVIHII 245 Query: 282 RCLAAPV--WIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFAC 339 + + ++ L+++ + + + L+++L+I L +++ YFA Sbjct: 246 IAIRRWKFYNYVKIEDENLGELRSSVAREWPAAQDLVRRLQDKLEILLPQEEIL--YFAL 303 Query: 340 ALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLII 399 + I + + VI +R I ++ Sbjct: 304 HFKSKHITELDEITSEEIEQVEKTLYDIYRMLQKRFGVIAINKDRYEEYLRMHIPAMVAR 363 Query: 400 NNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFF 445 S ++ + + K + + I L F + + F Sbjct: 364 LRSGLVMRNPMIYDFLNKYLFSTHITMMISDILEQNFNVRMNKNEF 409 >UniRef50_Q03GK2 Transcriptional antiterminator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GK2_PEDPA Length = 625 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 76/626 (12%), Positives = 205/626 (32%), Gaps = 50/626 (7%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYL--NFTLNGKARIFASGS 56 M +++ K+++LL+ + EL+ VS RT+ + L N + + Sbjct: 1 MSEKKERKMLNLLKSDTDWHSVQELSIFLDVSDRTVKKYYKTLAENQPVISSKYGYKYNG 60 Query: 57 AGYQLEIFERRSFFQLLQKHDND--DRLLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 Y+ I E ++ L L+ +N+ L++ + E+ + Sbjct: 61 PSYREIINESNDDEKIPNTKQERIFYVLNKLISVNSPINIYDLSAEIFTSESNLKLVFGD 120 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF--LIPLAGITR-------D 165 + ++ + G I +E + +L+++L K+ I I D Sbjct: 121 AENYVKKFDLEIKKQGDYFSILGSESDKRHMLSDMLYKESDGNFINKVAIQENFPEVNLD 180 Query: 166 NLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEW-------------PQYPGD 212 +L ++ ++ L D L+++IL I ++ + + ++ + Sbjct: 181 SLYAITQKFAKKNEIYLNTFD-LNNIILHITIAIQRIRNGYQFQTRDNRFNWKSSKFAQE 239 Query: 213 EIKQIVEHSGLFLGDNAVRTLTGLIEK---------QHQQAQVISADNVQGLLQRVPGIA 263 + ++ + F + GL+ + + ++ +L V I Sbjct: 240 LLNEVEKSQKNFKFPDEDLVSLGLVIDGSVSRWTIDMKDNISKETLNLIKSILSYVRSIY 299 Query: 264 SLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 +++ + + H+ R + + +KA P ++ ++ + Q+ Sbjct: 300 RIDLTGPEFLNQFAIHVSRLIQRLKSGKSIQNPMATQMKAQSPTVYECAVLISHKIASQV 359 Query: 324 DIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIAR 381 + + D++ I ++ A+ + + + + ++ +++ N ++ Sbjct: 360 GVEVPDNEIAYIAMHIGNAIAKQIEDNERLKVIIVVPDYQDKFLSIVDQIDKNFNNELSI 419 Query: 382 SLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQ-- 439 + +I + + D ++ + +T I++ + + Sbjct: 420 LKVVTEETDLSEKVDFLITLKNKINID--LPFVQISPFLTRTDNGNIRNKIEKIVNTKKQ 477 Query: 440 ---QPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENL 496 + F N + +++ I ++ D + + RE Sbjct: 478 LTFDHQIGSFFDERFFKINRNLKDKENVINYISDVFYEENITKKDYREDLFERERMSSTA 537 Query: 497 IVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELK-IFSYLA 555 ++AIPH + +GF + + V + IF L+ Sbjct: 538 FG-KIAIPHSLEMKALNTKGFIYINPHGITWGANKVYLVFALAVKKQDSKMFRNIFDRLS 596 Query: 556 SILCQ-HPAEIIAGLTGYEAFMELLH 580 ++ + + T Y+ F+ L Sbjct: 597 DVMTEGKNIATLVQSTSYDDFLNKLK 622 >UniRef50_B8DAY8 Transcriptional antiterminator, BglG n=24 Tax=Listeria RepID=B8DAY8_LISMH Length = 688 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 89/685 (12%), Positives = 217/685 (31%), Gaps = 112/685 (16%) Query: 3 NERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR--IFASGSAG 58 + R + +++ L P +L ++ G+S RT+ D++ +N L+ I + G Sbjct: 5 DARNMALLESLVVANVYLAPEKLQEELGISKRTLQYDVEKINKELDNIGLDGIQSVRGQG 64 Query: 59 YQLEIFERRSFFQLLQ-----------KHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 Y L E+ + ++L+ L LL+ + + + Sbjct: 65 YYLLEEEKPTIKEILENREASHKVFSASERRIRILFFLLVTDARVIIDTINECNEVSRNT 124 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDP------FLIPLA 160 + + +LK ++ L G+ + E + + L+ L Sbjct: 125 SLQDIKQLKLALKQFNLELVYDRKNGNMVLGDERSIRQFFIHYCMNNEEIATADQLLDLM 184 Query: 161 GIT----------RDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTD------ 204 I + + A + + L + + I+ + ++ Sbjct: 185 KINPMIKNQELFPKLDTIFEILAVTEKKIGIRYTDEVLERIGIMIFFFKERMKRNCYLNE 244 Query: 205 ------EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD-----NVQ 253 E + + +Q+ + + + L L+ + +A+ V+ Sbjct: 245 QEEHEVESFEIAQEIYQQLQQSENFKMNHAEITYLGKLLLGASRLNDDAAAEGKLDLIVE 304 Query: 254 GLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMS 312 ++ +A +N D + L +++ HL + E ++K ++ ++++ Sbjct: 305 KIIAEFERLACVNFEDHRNLKKDLLLHLQPAYYRLKFQIEWINPLRTDIKQSYSDVYEIT 364 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQN----ERQPIILLSDQNAIATINQL 366 + L + L + + + + + F L R N ++ +I+ S + + + Sbjct: 365 KKSLEPLEDLLGETIPEDEIAYVTILFGGYLSRKNNTLVERKKLLIVCSKGVGTSRMIER 424 Query: 367 AIERDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGI 425 + + + ++ S+ E + ++ + + V I+T A Sbjct: 425 QLSQLLGERVEILEPISIREFEKGLYAPDFIVST----LPIMEPKAPVFIVSPILTEAQK 480 Query: 426 EQIKHFL---------------------------------------------ATAFIRQQ 440 +Q+ + + + + + Sbjct: 481 QQLMKAIAPHILQKDSDARMLSSVLDVVDQYAKVEDREKLAAKLKSVLFQVQSDSQLEKS 540 Query: 441 PERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR-EGEGEN-LIV 498 P P W+ L + +I+ + +I E G +I Sbjct: 541 PTLEELLPKERITFKESVADWREAILVASKSLQQEGYISRNYQHAMIENIEKLGPYIVIA 600 Query: 499 NRLAIPHC-WSEQERRFRGFFITLAQPVEVNNEVINHV--LIACAAADARHELKIFSYLA 555 +A+PH + R + L QPV +++ + V +I A+ D+ + S L Sbjct: 601 PGIALPHASVDDGAYRVGMSLLRLNQPVSFSSKAKDQVKLIIVLASIDSYTHINALSQLT 660 Query: 556 S-ILCQHPAEIIAGLTGYEAFMELL 579 + I+ H E I T +L Sbjct: 661 NLIMKHHLLEQIEQATSAAEIAAML 685 >UniRef50_UPI0001C425D1 mannitol operon transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C425D1 Length = 689 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 92/669 (13%), Positives = 204/669 (30%), Gaps = 102/669 (15%) Query: 15 QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA--GYQLEIFERRSFFQL 72 + P + EL++ VS RTI +++ +N L G + ++ +L Sbjct: 18 EAPVSILELSKSLRVSRRTIYYNLEKVNDWLKDNKLDQVQQVKSVGIFITTSTKKKIPEL 77 Query: 73 LQ-----------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYER 121 L+ L+ L + L + L +KQ+ ++ Sbjct: 78 LKLNSDIQYEYTAHERQKLILILLFTSHEPIYVKDLITVTKASRNSCLNDLKAIKQQSKQ 137 Query: 122 T-CCLASRPGLGHFIDETEEKRVILLANLL---RKDPFLIPLAGITRDNLQHLSTACDNQ 177 + G++I E + N + + F L + ++ L ++ Sbjct: 138 YRLEINYERSSGYYIHGPEFELRKWFVNAFTFQKDNDFSTELMSLWKEANPSLLETVEHN 197 Query: 178 HRWPLMQGDYLSSLILAIYALR------------------------NQLTDEWPQYPGDE 213 + + + L + Q + Y G E Sbjct: 198 VQLLQVLQNDLDVQLNPESIEELTWHIAFFLERMKLGEYVFLTKDEKQALENNRAYKGAE 257 Query: 214 I--KQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISA------DNVQGLLQRVPGIASL 265 + +++ + L + ++ + LT + + + D V+ ++ A + Sbjct: 258 LLSQELFNSNQLSVPEDEIYYLTIFLLSLRSLSDSPMSTVNGLEDVVRKMVIDFQRYACI 317 Query: 266 NIIDAQLVE-NITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD 324 + VE N+ H+ + + ++K + F+++ + L + Sbjct: 318 EFEHFRAVEENLLIHIRPAFYRLKYGISAKNPLTKSIKEKYGDVFELTKKVLPHLERFVG 377 Query: 325 IPLFDSD--LIGLYFACALERHQNE----RQPIILLSDQNAIATINQLAIERDVLNCRVI 378 + D + I ++F + + ++ + +I+ S + I + +E Sbjct: 378 AAINDDEAAYITMHFGGWMRKEGSQPAARKHALIVCSSGIGTSQILKSQLETLFSTLDFE 437 Query: 379 IARSLSE-----------------------LVAIREEIEPLLIINNSHYLLD-------- 407 + S+ E + AI ++E ++ N + LL Sbjct: 438 VVTSIEESKTKADLIFTTVSLQKQMLPTFHVNAILNDVEKERLLTNVNRLLHQKESSSRT 497 Query: 408 ---------DAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRG 458 + I + + + + +P S Sbjct: 498 GQLNEILQAIEKHADIHNEKQLLEEIEYILSNKQLKIKELYKPMLNEIIDKSSIQIVDNV 557 Query: 459 ESWQHITRQICAQLVAQHHITADEAQRIIAR--EGEGENLIVNRLAIPHCWSE-QERRFR 515 SWQ A L+ + I+ +I+ E +I ++AIPH E R Sbjct: 558 SSWQEAVEMASAPLLDNNSISQSYVDAMISNIVELGPYVIIAPQVAIPHARPEKGVNRLS 617 Query: 516 GFFITLAQPVEVNNEVINH--VLIACAAADARHELKIFSYLASILCQHPA-EIIAGLTGY 572 + L +P+ + E + +L AA D LK S L ++L + E + Sbjct: 618 MSLLKLNEPIAFSEEERHQASLLFVLAATDNETHLKALSQLTTMLSEEENIEKLRQSEDV 677 Query: 573 EAFMELLHK 581 L+ K Sbjct: 678 TDIQVLIDK 686 >UniRef50_Q928S7 Lin2455 protein n=4 Tax=Listeria RepID=Q928S7_LISIN Length = 638 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 92/632 (14%), Positives = 218/632 (34%), Gaps = 53/632 (8%) Query: 1 MLNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 MLN+RQ I+ L E +LA +S RTI DI + + G+ IF S G Sbjct: 1 MLNQRQKNILSTLYNENNWLLGKKLADLFQISDRTIRNDIRVIKENI-GEDFIFTSKKLG 59 Query: 59 YQLEIFERRSFFQLLQ---KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 Y + + + + + +L+ LL++ + A+ E+ + + L Sbjct: 60 YAYNMEKPFPVDVEEEAGFEQNRMAQLIKKLLVDDGVDIYEYATETYTSESTIQRDIQWL 119 Query: 116 KQRYER--TCCLASRPGLGHF-IDETEEKRVILLANLLRKDPFLIPLA------GITRDN 166 + +E+ + G + I T ++ LL + + D L + I + Sbjct: 120 RGYFEQLLGLDVVIHSSDGIYAISATPTTKMELLNRIAKLDESLKTILITNCFPEINNEK 179 Query: 167 LQHLSTACDNQHRWPLMQGDY---LSSLILAIYALRNQ-------------LTDEWPQYP 210 + + + N+H+ L D L+ +I + L+ L + + Sbjct: 180 IHQILSKIINKHKIVLKYFDETILLTQIIYSSGFLKKHPEQSTVTEIDNPFLRELFDAIE 239 Query: 211 GDEIKQIVEHSGLFLGDNAVRTLTGLIEKQ----HQQAQVISADNVQGLLQRVPGIASLN 266 + I F+ + + + + + +L+ + + ++ Sbjct: 240 QEAGYGISAEMKQFILTEYEKIVAMNNFENQVTTKMVLEGELYQEILLILEEIKHVYLID 299 Query: 267 II-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 D ++ ++T H+ L + + + + D+++ L E+L + Sbjct: 300 FTTDLEVTSDMTKHIFIALERAKRGIVIKNQVTHIITQQYSYLLDIAIFIGEKLLERLGV 359 Query: 326 PLFDSDLI--GLYFACALERHQNER------QPIILLSDQNAIATINQLAI---ERDVLN 374 L ++I +Y + + + + ++ + A + + R V Sbjct: 360 ILNQEEIILLVMYLYQYYRKIEAKHQLNQVVRIAFIVLEGKAAMYYLREQLAEVLRPVNV 419 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 + I + + + E ++ L I+ L V + NI + K AT Sbjct: 420 EVIEITDNTQCQLLLSENVDVDLCISTKKIDLPAEVPCIVLSNNIGLIEEVTIKKQLSAT 479 Query: 435 AFIRQQPERFF----SAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE 490 + + + +N + + + +++ ++ +++ +RE Sbjct: 480 IEANKMKKFAYIKEKYLHEDLFLTNYEYDQKYNAIDFLSEYCISKGYVPTSFTEKLFSRE 539 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKI 550 I +A+PH + F + +P+ +N ++ ++I E + Sbjct: 540 QLFSTAIPTGIALPHPIKNVAIKSGIFICIMKKPITWDNHKVSLIMIPMIEELDGTEAPL 599 Query: 551 FSYLASIL--CQHPAEIIAGLTGYEAFMELLH 580 + S++ + E I+ + Y +ELL Sbjct: 600 INDFLSLIASNKSYVEQISKCSTYRECVELLQ 631 >UniRef50_UPI0001C369FF probable licABCH operon regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C369FF Length = 648 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 70/624 (11%), Positives = 180/624 (28%), Gaps = 72/624 (11%) Query: 14 EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAGYQLEIFERRSFFQL 72 + T LA+ GVS RT+ D+ L L I + S GY+L + + L Sbjct: 18 RKTYVTSAALAEAAGVSVRTVKYDLKELQSFLKEYGVEIESKRSYGYRLLVGDGSDMEGL 77 Query: 73 LQKHDND-----------------DRLLALLLLNTFTPRAQLASALNLPETWVAERLPRL 115 + + + LL+ + +L + + + + L R Sbjct: 78 SKALRANLRKHKGEVFRYNFQRVIYIINKLLIGKPYYKAEELMDTFYISRSTLTQDLNRA 137 Query: 116 KQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA------------GI 162 + + + G + E + + +A + + + Sbjct: 138 RTLLAKFRLEIDVNLRRGIGVTGDELDKRLCIAEYFFRYDDKLQVMVQRRADGGKYDWDA 197 Query: 163 TRDNLQHLSTACDNQHRWPLMQG---DYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVE 219 RD L + ++ L D S + +++ ++ ++ + E Sbjct: 198 QRDTLVRIVWEACRANKIRLSPFLAVDLASHMYVSVLRMKAGCGIGELPGHTMTVEYVRE 257 Query: 220 HS---GLFLGDNAVRTLTGLIEKQHQQAQVISADN------------------VQGLLQR 258 + + +++ +++ A I + V +++ Sbjct: 258 RYAAGEVADQLEKLYSVSISEKEREYFALHILSKKMPDSGPVGSGEHATLKQCVTEIMRE 317 Query: 259 VPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 V L+ + ++ + + + R + + A ++ Sbjct: 318 VKDNFELDFTNDPVFLDFLYSSIEPMVLRLRTHLIVRNPLLFENLRRYLFATKVAHSASG 377 Query: 318 LLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIAT--INQLAIERDVL 373 ++ + + + +++ + F + H+ ++ I ++ I + + Sbjct: 378 IIEKLFGVQMDNNEFAYLVPAFNMIISTHEKRKKFKIGFCGDLGLSEALIYYNELSESLP 437 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLA 433 + LI + + L + I + + ++ L Sbjct: 438 RDGYELVWLDRYHNTGYLNQLQYLIYVSDYRLPSELPYYEIQDGDSTSEVCSAIAEYKLE 497 Query: 434 TAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG 493 I Q + F G + G+S + + + L A+ I A + + Sbjct: 498 QVQIEQYLKPEFGIFG------LEGKSREEVMENLYRCLAARGLI----ATELDWKNAFR 547 Query: 494 ENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY 553 N + N +A + + L P+ ++I +++ D L + Sbjct: 548 ANEVGNGIAHIQDLGRILKNAGCYVCILKTPILWEQDIIKVLVMIKTKRDGDKNLSLLCR 607 Query: 554 LASILCQ--HPAEIIAGLTGYEAF 575 + S E Y+ F Sbjct: 608 IVSNWASSPEKVEHFLKSQSYDVF 631 >UniRef50_C1QBY4 PTS system IIA component; transcriptional antiterminator, BglG family n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBY4_9SPIR Length = 621 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 83/622 (13%), Positives = 207/622 (33%), Gaps = 47/622 (7%) Query: 1 MLNERQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-G 58 M N+ +I+ +L + T +LA++ VS +TI I LN L S G Sbjct: 1 MKNKYIKEILSILSAESYITAEKLAKELNVSEKTIRIKIQELNNDLEKTGVKIVSKPRYG 60 Query: 59 YQLEIFERRS------FFQLLQKHDNDDRLLALLLLN--TFTPRAQLASALNLPETWVAE 110 Y L + F + + L+ N + L+ AL++ +T + Sbjct: 61 YTLLCDDNNKDIKAISFNTVNDFEYRVKYIFEYLINNNDEYIKSDTLSEALDISKTTLTN 120 Query: 111 RLPRLKQRYERT-CCLASRPGLGHFIDETEEKRV-ILLANLLRKDPFLIPLAGITRDNLQ 168 L ++ + + RP G I E ++ L++ + + Sbjct: 121 TLKIIEDNIKYYNIKIERRPNYGIRIIGNEFDIRNCIIDYYLKQYIHDEKYINKSIEKFV 180 Query: 169 HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLT-----DEWPQYPGDEIKQIVEHSGL 223 ++ + +++ ++++I ++ + + +E ++ Sbjct: 181 IDFIKDNDIKLSEINLENFILYILVSIERIKMGKVIDCYDKDILKDIKEEELKLANQLAE 240 Query: 224 FLGDN-----------------AVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLN 266 L A ++L E + Q + VQ +L V ++ Sbjct: 241 ILEKESNIKFNEAEKIFIAIHIASKSLLISSENSNFIIQNKLDNIVQEILDLVYSNLKID 300 Query: 267 IIDAQLVENITGH-LLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDI 325 + + + + H ++ + + + ++K+ + ++ ++ T+L+ Sbjct: 301 LRNNLNLRLLLNHHMIPLDIRIRYNVLQKNPMLCDIKSNYGLSYLIASEANTVLKSYYKK 360 Query: 326 PLFDSD--LIGLYFACALERH----QNERQPIILLSDQNAIATINQLAIERDVLNCRVII 379 + D + + L F ALE + +N+ +I+ + + +++ + I Sbjct: 361 EISDDEIGYLALLFQIALEENSNEEKNKINILIVCGSGKTTSKLLMYKYKKEFADYIDNI 420 Query: 380 ARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQ 439 + ++ + + I + + + + I +K+ L + + Sbjct: 421 YTTDLIMLKDFDFSKVNYIFSTVPINFRVP-LPIVQIGLFLENTDIINVKNALE---LSK 476 Query: 440 QPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVN 499 +++G S I + IC + I + ++ RE E N Sbjct: 477 NDFLNDYYNKDLFSLDIKGNSRDEIIKNICINIKKYIDIPDNFYDSVMKREDLSETDFGN 536 Query: 500 RLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLAS--I 557 +AIPH + + + L +P+ + + + + + L+ F + Sbjct: 537 LVAIPHPFDILTEKTFVYVAVLEKPIIWYKNNVQVIFLVSISNNKDDNLQKFYQYTVDFL 596 Query: 558 LCQHPAEIIAGLTGYEAFMELL 579 L + + ++ M LL Sbjct: 597 LNEESVIKLIENKTFDNLMYLL 618 >UniRef50_B0P2P0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P2P0_9CLOT Length = 698 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 99/694 (14%), Positives = 204/694 (29%), Gaps = 116/694 (16%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + +R +I+DLL + T LA + VS RTI DI +N L + + Sbjct: 1 MKKRSKEILDLLGRRENDHTISTLAAKFEVSERTIRNDIKDINDYLKEQEIKPIRFGSNG 60 Query: 60 QLEIFE----------RRSFFQLLQKHDNDDRLLALLLLN--TFTPRAQLASALNLPETW 107 + + E + F+ + L A +L+N +Q+A L + Sbjct: 61 LIVMEEDISQARETTQQEDFYTYKLSKEERRMLAAAILINTKDHITLSQIADILYVSRAT 120 Query: 108 VAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 + L +K+ E + S G ++ E + + L L+ I R Sbjct: 121 IINDLDEVKRMLESGKLKVISYSNKGLRLEGLEGDKRLFLLRLMSVGSNGIKENSTIRSF 180 Query: 167 LQHLSTACD---------------NQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQY-- 209 + L+ +H + D +L L + Sbjct: 181 FKGLNMEIKMSEDEQRNLQKIINEQEHAYGRFMTDDSFDYLLQYLMLSIERIRNGNVMTE 240 Query: 210 -----------PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNV------ 252 D K I ++ L V L G+++ + + Sbjct: 241 PIEGNKSKYAMAKDIQKYICQYWDLEDAKGEVDFLCGVLDSMSYVKRQRREQKIIGLQLV 300 Query: 253 -QGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFD 310 + ++ + +N+ D EN+T HL + + R + P + Sbjct: 301 TRKFIEHISKDLGVNLNRDFAFYENLTDHLESIIMR-SFNVTQRDDFLKQYVEKNPKVLE 359 Query: 311 MSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNER---QPIILLSDQNAIATINQ 365 + + +L +D + + + I ++ ALER + + + +I+ + + Sbjct: 360 VVQKYKDMLSNFMDREISEIEIDYIVIHICAALERRKKKEVEFRVLIVCGGGIGTSQLLL 419 Query: 366 LAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV--------- 416 + + V+ S L + + L+I + V Sbjct: 420 AKMRNRF-DFHVVDVVSAHLLDNEKYQNIDLVISTIPLRDYEGEYILVSPVFSDEDYLRV 478 Query: 417 -----------------------------------------KNIITAAGIEQIKHFLATA 435 + +++ F Sbjct: 479 NGKIEEIQEKHKIEPIPIQERVALPQKDAQKLIDELSQIIKDPSLMNQVTRKVQEFFGIE 538 Query: 436 FIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA--REGEG 493 Q+P + ++ W+ + L+ Q I +I +E Sbjct: 539 VEIQEPFLCELLTAADIQLDIECSDWRDAIIRSAQPLLDQGKIEDKYIDAMIDNVKENGA 598 Query: 494 ENLIVNRLAIPH-CWSEQERRFRGFFITLAQPV---EVNNEVINHVLIACAA-ADARHEL 548 +I A+PH + I L +PV +++ E+ C + D + + Sbjct: 599 YIIISPEFALPHEGFDRGCNEVGMNLIRLKEPVTIEDIDGEIAKVRFFCCMSTEDHKKHM 658 Query: 549 KIFSYLASILCQH-PAEIIAGLTGYEAFMELLHK 581 K F +L ++L E +A E + + K Sbjct: 659 KAFFHLVNMLTNRGFKEELAAAKTPEEAADTIRK 692 >UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWK7_STRM9 Length = 628 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 85/627 (13%), Positives = 204/627 (32%), Gaps = 52/627 (8%) Query: 2 LNERQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-GY 59 + I +L T EL+ +S +T + I L+ L S + GY Sbjct: 1 MENELKLIYRILFDGNFHTSTELSAHLKLSDKTCRKYIKELSEILKKHDITIISKTRFGY 60 Query: 60 QL--------EIFERRSFFQLLQKHDNDDRLLALLLLNT-FTPRAQLASALNLPETWVAE 110 +L EIF S+ + + L+ L+ + +A + + ++ Sbjct: 61 RLSGNILKENEIFNSDSYKIPITSEERQIYLIDRLISEEGYIKLEDIAEKIYISVKTLSN 120 Query: 111 RLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRK----DPFLIPLAGITRD 165 + ++++ +P G + E L ++L K + F + Sbjct: 121 DIKKIEKIIRTYNLEFERKPYYGLKLVGEELNIRNFLIDVLEKRLNENKFFDSKDRYDIN 180 Query: 166 NLQHLSTACDNQHRWPLMQ---GDYLSSLILAIYALRNQLTDEWPQYPGDE--------- 213 ++ L+ + + ++++ + Y + + +E Sbjct: 181 SIAKLTYTFLRDKNVKISDISLQNLVAAIYVTFYRVEANKRIKSIDIEKNELFLSKKTHI 240 Query: 214 ------IKQIVEHSGLFLGDNAVRTLTGLIEKQ-------HQQAQVISADNVQGLLQRVP 260 I + H+ ++ + + + D +Q L+ V Sbjct: 241 LECMKYIYNELSHNVDLDSNDIEYITIHFLTSETLTYKSLKTEDINEVNDIIQELIYYVK 300 Query: 261 GIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 +++ D +L +N+ H+L + + + + ++K P ++++ + L+ Sbjct: 301 LTFKIDLYNDEELYKNLYTHILALCIRIRFGIKIKNPLLEDIKKNMPLEYNVATYVCNLI 360 Query: 320 REQLD---IPLFDSDLIG--LYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLN 374 ++ + + + I L+ + + + + ++ ++++ + + + + Sbjct: 361 SKRFNKRSLSEAEIGFIAVILHMSKGININMSNKKNVLIVCPSGRGVSKFLIYTYSNFFS 420 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 I S + ++ + II + L + + I +IK+ L Sbjct: 421 EYTNIISSCGANELVDMDLGNVDIIFSLIDLDMKIDKPVYKINYFLNDEDILRIKNILK- 479 Query: 435 AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE 494 P S ++ I + + +L+ ++ D I RE G Sbjct: 480 ---DNNNYLKEIIPKSLFIYLDEIKNKDEIIKLVSDKLMKIPNMNNDIEALIHKREKLGM 536 Query: 495 NLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYL 554 I N +AIPH E PV+ N +N +L C KI+ Sbjct: 537 TEISNEVAIPHPIGVIEGVNVIGVCISKNPVKWINNEVNIILFLCLDNKNNKNEKIYEAF 596 Query: 555 ASIL-CQHPAEIIAGLTGYEAFMELLH 580 I+ + I Y+ F+ +L Sbjct: 597 TKIVGNKEIINDILLNPTYDNFINILE 623 >UniRef50_D0BLL7 PRD domain-containing protein n=2 Tax=Granulicatella RepID=D0BLL7_9LACT Length = 650 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 85/647 (13%), Positives = 212/647 (32%), Gaps = 71/647 (10%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR--------- 50 +N+RQ+ +++ L + + +LA + VS +T+ +DID +N L G + Sbjct: 1 MNKRQVLLLEYLMKNIEYLSANQLADRYKVSTKTVYQDIDKINDFLKGNSIETEVIKIPR 60 Query: 51 -------IFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNL 103 + ++ ++ + + L + + + + + + Sbjct: 61 KGIKLLSQLENKKIHTKIIKLNGEMKESFSPEYREKELIRKLFITHEKVDLYEFSEEMFV 120 Query: 104 PETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLL----------RKD 153 ++ + + +L + + E L + K+ Sbjct: 121 TDSTIHRLIDKLNSIFISFDVKLKIKRDEIILKGNERNIRKALEIFIVKFVSNDRDRFKN 180 Query: 154 PFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE 213 L + + + + + Y L I+ RN+ + + Sbjct: 181 LELFFSKEDINNCQKSIVKLSEKYQFHFTDEYLYSLLLDCLIFKKRNEANEILTNRLSNL 240 Query: 214 IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVI---------------------SADNV 252 + + F + T+ ++ ++ + V Sbjct: 241 VNDVNHLEVYFFAGELLETILNFTLEKISPYEIEAMAYNLLAFGFNIQSVEYMKNVNEQV 300 Query: 253 QGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDM 311 + L+Q+V + SLN+ D L ++ H+ + + ++ +K + + F++ Sbjct: 301 KTLIQKVSNLLSLNLTTDEHLQMMLSAHISKMIIRLRNQNFISNPALEEIKKQYSSLFNV 360 Query: 312 SLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIE 369 I L + ++ + + + I ++F A+E+ +++ + A + + + Sbjct: 361 IWLSIRTLSQYYELSIPNEELAFIVIHFQVAIEKIMKPLNIVVICQNGIATSELIMNKLR 420 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 R + + SL EL L+I L+ V I V IIT + I+ Sbjct: 421 RIFSSNEKLTTISLRELDFYDLRNIDLVISTIGLPELNIPV---IEVSPIITKEELRMIQ 477 Query: 430 HFLATAFIRQQPERFFSAPGSFH-------------YSNVRGESWQHITRQICAQLVAQH 476 F A S G + ++ Q ++ + + Sbjct: 478 QFYAEQSTDNYRMMKTSLNGREFNVASLNTLLKEPKLIKINVKNKQECIERLIIE-CSIG 536 Query: 477 HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL 536 + T + I RE G + +A+PHC + ++ ++L +P+E ++ VL Sbjct: 537 NQTEEFRDSINQRELLGSTSVYTGIALPHCDPKVVKQSELILMSLDKPIEWGKNQVSLVL 596 Query: 537 IACAAADARHELK--IFSYLASILCQHPAEIIAGLTGYEAFMELLHK 581 + A K + + + I Q+ + ++ + + + Sbjct: 597 LIAIAEQDIPVFKDSLIALYSVIENQNLMSELMLMSDGKKIKNKILE 643 >UniRef50_A8RAH0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAH0_9FIRM Length = 639 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 91/629 (14%), Positives = 207/629 (32%), Gaps = 59/629 (9%) Query: 2 LNERQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L RQ KIV + Q T EL+ S RTI +I +N + I S + GY Sbjct: 19 LTTRQSKIVQEINTHQSLTGKELSILLNCSVRTIQNEIMAINRSHK----IIESSNKGYT 74 Query: 61 LEIFERRSFFQLLQKHDNDDR-LLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRY 119 L + +Q + D+ L LL N+ LA L + T + + L + Sbjct: 75 LNTSAYEAIYQSSKYPQKDNEALKILLFSNSSIHIYDLADQLYVSITTLEKHLKTYQDIL 134 Query: 120 ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF-----------LIPLAGITRDNLQ 168 + R I+ E + L+ NL+ + +++ Sbjct: 135 KEYSLSIIRNKGYLHIEGNEIYKRQLIKNLIINETQGSFINIESFSPYFDNIELSKTKSF 194 Query: 169 HLSTACDNQHRWPLMQGDYLS-------------SLILAIYALRNQLTDEWPQYPGDEIK 215 D+ + + + L+ I + + + ++ Sbjct: 195 LEKIIHDHDYSIDRVYANTLTVSLSVALYRMQTHHYIDSEIIYQCTKDSIEYKIATKILE 254 Query: 216 QIVEHSGLFLGDNAVRTLTGLIEKQ-----------HQQAQVISADNVQGLLQRVPGIAS 264 E L N ++ ++ LI Q N+ +L+ Sbjct: 255 YYKEKYQLTPTKNDIQYISSLIIGQIKPNDTVTNPIDSLLDTDFIQNIHNILKSAFRHYM 314 Query: 265 LNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLD 324 L+I + + + + H+ + + ++ +LK+ P ++++++ +++ + Sbjct: 315 LDIDFSDNIYSFSMHVDGLIKRSKAMQPAYNYAVRSLKSDHPFIYEVAVYIANNIKKAYN 374 Query: 325 IPLFDSD--LIGLYFACALERH--QNERQPIILLSDQNAIATINQLAIERDVLNCRVIIA 380 I + DS+ I +Y +E + + L + + + + + + + +I Sbjct: 375 IQINDSEIGFICIYIGSLVENAIYRTQIYCFFLCENYHQVKQYLYNKLRKILPDTIQLIQ 434 Query: 381 RSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAF---- 436 + L + L+I + + I V +T A I++I ++ Sbjct: 435 GTFENL----QNQSVDLVITTDN--IVHLPIPVIEVSPFLTLADIDKINKVISNLTGLYT 488 Query: 437 -IRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 ++ F Y + I + ++V + + RE Sbjct: 489 SMKASTLFFEFFQSDLFYICDDFQDKYEILDFLAKEMVHHKIADTNFPDSVKNREQLSST 548 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEV-INHVLIACA-AADARHELKIFSY 553 + AIPH + + + + + E +N VL+ D + ++++ Sbjct: 549 CFSGKYAIPHAIELNANKTMVSVLISHKGIHWDQENIVNIVLMISVRREDRKRFIELYES 608 Query: 554 LASILCQ-HPAEIIAGLTGYEAFMELLHK 581 + IL + + + ++ F +L + Sbjct: 609 MIQILENPYKLSRLTNVNSFDEFKTILLQ 637 >UniRef50_A6CNR6 MtlR n=2 Tax=Bacillus RepID=A6CNR6_9BACI Length = 695 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 93/675 (13%), Positives = 209/675 (30%), Gaps = 105/675 (15%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ++ R+ I+DL+ + T LA VSGRTI R++ + L + Sbjct: 2 IITSREKSIIDLIIRTSGKHTVSTLADYLNVSGRTIQRNLKSVEKILEEYQLKLKRTTNE 61 Query: 59 YQLEIFERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPET 106 ++L+Q + L+ LL + + LA+ L + Sbjct: 62 GLFIDGRNDQIYKLIQKLTDAVPTDETPEERKLSLLVTLLHEGPYFKKQVLANHLGISPA 121 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 + L L + L + G+G + E + LAN + + + Sbjct: 122 TLTVYLDELTDWLSKFSVLLTRKRGVGVEVSADEASKRHALANFFLVYFYEEIIESLYLL 181 Query: 166 N--------------------LQHLSTACDNQHRWPLMQGDYL---SSLILAIYALRNQL 202 + +Q + L DY+ + L+I + L Sbjct: 182 QKGTHLNEPVLGYFSPENMLAVDQTVNRIFHQEQTKLTDSDYIGLVVYICLSIQRTGSNL 241 Query: 203 TDEWPQYPGDEI-----------KQIVEHSGLFLGDNAVRTLTGLIEKQHQQA------- 244 E P + ++ L + + L+ +++ QA Sbjct: 242 LLEEPAVSPSDYSAEYRLVERIGAELDHRISTSLMKSDIHYLSVILKGSKVQAADSIDYD 301 Query: 245 QVISADNVQGLLQRVPGIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKA 303 +I ++ +++ V +++ D L + + H+ + E +++K Sbjct: 302 SIILGQLIKKVIEDVSTKLHVDLSDDFSLYQGLLAHMEPSIFRLKQKMELFNPLTDDIKK 361 Query: 304 AWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACAL--ERHQNERQPIILLSDQNAIA 361 +P F + + + P + + L+F AL + + +++ + Sbjct: 362 KYPVLFMAVRDSLENEFKDIHFPEDEVAFVVLHFGSALLMHEEKVKINAVVVCPTGIGTS 421 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + I++++ + SL + + + ++I L +Y V +++ Sbjct: 422 KMLASRIQKEITEINSVEILSLKDFQSASLKEYDIVISTVR---LPFTDIDYTLVSPLLS 478 Query: 422 AAGIEQIKHFLATA----------------------------------FIRQQPERFFSA 447 I I+++L Sbjct: 479 DKDIGSIRNYLQNNLEKLTRDERYLRTAVKASEPGKEKRPKVRDLLQEMKDVHTSIESIL 538 Query: 448 PGSFHYSNVRGESWQHITRQICAQLVAQHHITA--DEAQRIIAREGEGENLIVN-RLAIP 504 Y + S + ++ Q +T D + RE +G I N + + Sbjct: 539 DNFRVYRSQHAGSHFTVLNEMVEQAEKDGLLTDSKDVLHELGEREKKGGLGIPNTNMGLY 598 Query: 505 HCWSEQERRFRGFFITLAQPVEVNNEV------INHVLIACAAADARHELKIFSYLASIL 558 HC SE L+QP+ + + +L+ A ++ E +I S +++ L Sbjct: 599 HCRSECIGELIFQVSHLSQPLVIKGMDGREMPMKSLLLMLAPANMSKREQEILSIISTSL 658 Query: 559 CQHPAEIIAGLTGYE 573 + ++ + E Sbjct: 659 IEDNISMMIFSSSNE 673 >UniRef50_Q04I39 Transcriptional regulator, BglG family protein n=39 Tax=Streptococcus RepID=Q04I39_STRP2 Length = 676 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 96/675 (14%), Positives = 206/675 (30%), Gaps = 95/675 (14%) Query: 1 MLNERQLKIVDLLEQQ-PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 M + R L I+ L + EL+ + + + + IDYL L K + Y Sbjct: 1 MFDYRALVILMTLMDHCELSLYELSVKVSLPIKEVKEGIDYLVPYLANKGIVLDKKQGRY 60 Query: 60 QLEIFERRSFFQLLQKHDN--------DDRLLALLLLNTFTPRAQLASALNLPETWVAER 111 L ++S +++ + L F L + + Sbjct: 61 SLSNRTKQSLTDIIKSDELVLPKSTRLALIYLYTFCRLDFISNNHYQDFLKVSKNTTLSD 120 Query: 112 LPRLKQ-RYERTCCLASRPGLGHFIDETEEKRVILLANLLRK------------------ 152 + L++ + L G+ + +E + L ++ + Sbjct: 121 IQSLRKIMLDNDLELGYSRAKGYTLHGSEWNKHRLAFQMVSELLESSIGIWDLDYVLSSW 180 Query: 153 -DPFLIPLAGIT-RDNLQHLSTA-CDNQHRWPLMQGDYLS-------SLILAIYALRNQL 202 L +D + L NQ + L ++ + L + + Sbjct: 181 GYSLTYDLINQVVKDYYEKLQLVPIVNQLKVCLFGLVFILCRYQRDVERVCLSETLVSPV 240 Query: 203 TDEWPQYPGDEIKQIVEHSGLFLGDNAVRT---LTGLIEKQHQQAQVISADNVQGLLQRV 259 + D + + +F D+ L+ E + A V + ++ R+ Sbjct: 241 IQDITTILLDTVVDLGIIDTVFSEDDYRYITVLLSSCFEGEVDVAPVYFNQLTEAIISRM 300 Query: 260 PGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 I+ L+ + L EN+ HL+ + + ++K +P F++ + Sbjct: 301 EDISLLHFKQREGLRENLRRHLIPAYYRLKFGLPSSNEYVLHVKEHYPDLFELVKDSLMP 360 Query: 319 LREQLDIPLFDSD--LIGLYFACALERHQNERQPI----ILLSDQNAIATINQLAIERDV 372 L + +D P+ DS+ ++F L++ Q I+ + + + + + + Sbjct: 361 LMDAIDNPIPDSETAYFVIHFGGYLKKADTLPQKCYKAAIICPNGVSSSLMLKENLLALF 420 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA---------- 422 I + +L ++ + ++ + + + A Sbjct: 421 PQIEFIGTSKIDDLQ-VKASSDYDMVFSTIKVETEKPNYLVSVMMTEEQAIQLVELVLKD 479 Query: 423 ---------AGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGES------------- 460 + + I Q+ E + + N R E Sbjct: 480 FPNLEYGDFEIEQILNIVKRYGIITQELELRLALKNYLYQKNDRKEIVPVLEQLITKETY 539 Query: 461 --------WQHITRQICAQLVAQHHITADEAQRIIAR-EGEGE-NLIVNRLAIPHCWS-E 509 W+ R L+ Q IT + + +I + E G + +AIPH E Sbjct: 540 QVSSQKLGWKEAIRLAAKPLLDQDKITENYPEAMIQKVEEFGPFINLGKGVAIPHARPDE 599 Query: 510 QERRFRGFFITLAQPVEVNNEVINHV--LIACAAADARHELKIFSYLASILCQHPAEI-I 566 + L +P+ + + V LI AA D LK S+L +IL + Sbjct: 600 GVNEIGMSMLVLEEPIYLLDNPEQEVRLLICIAAIDNESHLKALSHLTTILRDKNHVQTL 659 Query: 567 AGLTGYEAFMELLHK 581 Y+ ++ + Sbjct: 660 ISSKNYDDIKMIIKQ 674 >UniRef50_C0CN20 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CN20_9FIRM Length = 649 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 83/644 (12%), Positives = 192/644 (29%), Gaps = 73/644 (11%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-G 58 L+ RQ K++ ++ Q T ELA VS RTI D+ +N L G S + G Sbjct: 6 LSLRQRKLLHYIQDQHSYVTGTELANHLQVSARTIRSDVAEINENLQGTGISIISKRSLG 65 Query: 59 YQLEIFERRSF-------FQLLQKHDNDDRLLALL-LLNTFTPRAQLASALNLPETWVAE 110 Y L++ +++ L + D + L L L + + T + Sbjct: 66 YLLKVEDKKLLKELNQVSNTFLTRDDRTRHMAFCLCLAEEPINLYTLEDEMFISRTTLEH 125 Query: 111 RLPRLKQR--YERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL- 167 L L+++ R F ++ E KR I+L L ++ Sbjct: 126 DLAALRKKYVLPYPHINYCRSKNHIFFEDNERKRRIILNTLFSENWNYNARGNAFYQYQY 185 Query: 168 ---QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQL---------------------- 202 + + + G L + + + L + Sbjct: 186 LDEELVDLIMLESQFYLRKYGIVLEDINMIVLNLAIAIACCRMNDGHFLESRKEPLPLDP 245 Query: 203 -----TDEWPQ---------YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVIS 248 D+ + +P E ++I H ++ G +E + Sbjct: 246 ACVHAADDLLESLEKKLGCIFPDSERQEIYLHLSCARLLDSSALSFGTLELYFAPETIAF 305 Query: 249 ADNVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 A++ L++ L+ D + + +L + Q+ + +++ Sbjct: 306 ANDYLALIR---EKFQLSFSDNEDFYITLLQYLRYLSMPLHY-LNTIQTHTDIVRSNLLI 361 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALE---RHQNERQPIILLSDQNAIAT 362 +++++ L +++ + + ALE R + + +I+ + Sbjct: 362 EYEIAILIQPLALSYTGDYWDETELMYLAFCISGALEAANRTYPKLKTVIMAHLNMPASW 421 Query: 363 INQLAIERDVLN-CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + + + + + L+I + L D + + T Sbjct: 422 HLKQKLLSAFHDYLELTALLPVYSKDTYDFSKTDLIITTANKTLTCDPHCKTLLISPFFT 481 Query: 422 AAGIEQIKHFLATAFIRQQPERFFS-----APGSFHYSNVRGESWQHITRQICAQLVAQH 476 ++ + I + + +F + + +S I + + Sbjct: 482 KTDQMNLEKHIFQIHINRLYGQKLPSLFQLLQEAFWHEAILTDSRVSIIELLSRDFLDAG 541 Query: 477 HITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVL 536 ++ D + ++ RE +A ++ TL ++ N+ I V+ Sbjct: 542 YVELDYVEDLLRREAILPFAFQPGVAFLSSLVPS-KKTCLSVATLEHRIKWNSYKIRTVI 600 Query: 537 IACA-AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 +A D+ K+ + L + E + Sbjct: 601 LAAVCPGDSTLVFKLLNELYYSSRNYEDAKFLKTK--EELLNFF 642 >UniRef50_C0EX25 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX25_9FIRM Length = 658 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 86/622 (13%), Positives = 213/622 (34%), Gaps = 66/622 (10%) Query: 3 NERQLKIVDLLEQQPRT-PGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQL 61 R +K+++ L +++ GVS +T+ + L+ TL + Q+ Sbjct: 25 TRRDMKMIEYLRDYEVVELKAMSEYLGVSVKTLKNQLKELSETLKEFGVD-VQFVSSNQI 83 Query: 62 EIFERRSFFQLLQKHDNDDR-------LLALLLLNTFTPRAQLASALNLPETWVAERLPR 114 + F +++ LL L+L + F ++A L + +++ + L Sbjct: 84 LVKGHEKFAEVMSVSIPRFEMEFERRFLLLLVLHDNFLTIQEIADELLVSKSYAEKHLAA 143 Query: 115 LKQRYERTCCLASRPGLGHFIDETEEKRV----ILLANLLRKDPFLIPLAGITRDNLQHL 170 + ++Y + ++ G ++ KR +L L + +++ L + Sbjct: 144 IMKKYPED--IQAQRHYGIRYAASQNKRREVFVKILFPYLFGEDYIVALEQFDSLHFPLF 201 Query: 171 STACDNQH-------------RWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQI 217 Q W + + L L L I L E + P + Sbjct: 202 HYFTKEQMLRTRGAIQALQRLEWFQLTDESLQQLFLYILFLTRHADSENTEKPVAVQEDF 261 Query: 218 V----------------EHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN-------VQG 254 + + L +R + L+ +Q ++ Sbjct: 262 INTQEFDGLYEWILGWCQEFRLPDSKEELRYMYTLLLSLRKQKIACQDQIMDKMRHPIKE 321 Query: 255 LLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVW-IAEHRQSSMNNLKAAWPAAFDMS 312 +L+ + S + D L+E ++ H+ + E + + ++K +P F+M+ Sbjct: 322 ILKGISERLSADFSEDEDLIEGLSSHIYTTILRGNHLDVETDEYMLKSMKRQYPFGFEMA 381 Query: 313 LHFITLLREQLDIPLFDSD--LIGLYFACALERHQ---NERQPIILLSDQNAIATINQLA 367 + + ++ + ++D + ++F A+ER + + + II+ A A I + Sbjct: 382 AIAADYIADIYNLSMKENDLIYLAIHFQAAIERMKDAGEKTKIIIVCHFGAAAARIIRSK 441 Query: 368 IERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQ 427 IER ++ V SL E ++ ++ D I + + +++ Sbjct: 442 IERKLVGVEVTGMYSLQEFKQLKNPDCDYIVTTERILKADFP---IIYISMALPEREMQK 498 Query: 428 IKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII 487 IK + + E + ++ + + + L+ + +T Q ++ Sbjct: 499 IKEGIKEIQVNHLLELNI---LEAIILPIEEKNMESAVKAMVQPLLEEDFVTEKYLQSVL 555 Query: 488 AREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD-ARH 546 RE + N +A+PH + R + P+ ++ ++ + +++ + Sbjct: 556 EREEMSSTSL-NHIALPHGNPAMVQNTRLVIGRMNHPILWDDSKVSCAFLFAVSSEMLKE 614 Query: 547 ELKIFSYLASILCQHPAEIIAG 568 + +F+ + E Sbjct: 615 KPMLFNTFYRTMADPEVEESIK 636 >UniRef50_C6J1G7 PTS system IIA 2 domain-containing protein n=2 Tax=Bacillales RepID=C6J1G7_9BACL Length = 697 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 85/676 (12%), Positives = 186/676 (27%), Gaps = 99/676 (14%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L+ R +++ L P +L + G+S R + + +N L S Q Sbjct: 3 LDARSSQLLRELLTNPGIKNKDLEHKYGLSRRQVEYSLSKINDWLKANYLPEIKRSRTGQ 62 Query: 61 LEIF-------------ERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETW 107 I + + L + + +L +L N AL + + Sbjct: 63 FLIGKALFTALSMDRERNTKGNYNLSAEERANLIILMMLSKNEELSLFHFTHALGVSKNT 122 Query: 108 VAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRK-------DPFLIPL 159 + L + + G++I+ E + L +++ K + +L L Sbjct: 123 ILRDLKNAQDAISPLHLEIKYSRMHGYYIEGNEFNQRQALIDIVHKTLETYGGENWLREL 182 Query: 160 AGITRDNLQHLSTACD-NQHRWPLMQGDYLSSLILAIYALRNQLTDEWP----------- 207 AG + L + + + L D + I L + + Sbjct: 183 AGAAPSQVAALRRKIEAVESKLNLKFTDEKLESMPYILLLLLRRVKQGRVVEGFHIHYDE 242 Query: 208 ----------QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQ 257 + E++ I +F+ + + T + + +L Sbjct: 243 LSDTKEYRAVEELLSELEPIPMEERMFITLHLLTTNISSTDYLSDDTLPELNRALSEMLS 302 Query: 258 RVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 + A + + D + L I HL + ++ + + Sbjct: 303 QFERNACVTLQDKEQLHNKILLHLKPAYYRIKYRLSITNPLQESVSKEFKELHHLVKKSC 362 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERH----QNERQPIILLSDQNAIATINQLAIER 370 L E + + +S+ + + R + + + +++ ++ + + + Sbjct: 363 GPLVELIGAEIPESETTYLTMLIGGWCTRQGDSIRQKIRALVVCPKGVCVSRLLESTLRE 422 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT--------------- 415 A S+ E E + + + Sbjct: 423 LFPEFVFFDALSVREFHNYALEYDVVFSTVYLPTDKKLFLIKTFLGKEDRYRLRKQVMEE 482 Query: 416 -------------VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSF----------- 451 + II + Q L + F Sbjct: 483 LHGYVPSEFNMDRIMEIIGKYAVIQNSQSLLLELRQYLMPEREPRHNPFMAPEMPDLSDL 542 Query: 452 -----HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA-REGEGEN-LIVNRLAIP 504 +SW+ R L+ + ITA Q ++ E +I +++AIP Sbjct: 543 IVPDTITLARCAKSWEEAVRMAAEPLLRRGSITAGYVQAMLEASESRDPYIIIGHQVAIP 602 Query: 505 HCWSEQ-ERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPA 563 H E + L +PV + HV++ AA D L+ + L + Sbjct: 603 HADPECGVHEVSMSLLRLEEPVCYAEGYMIHVIVVIAAKDKYRHLRSLNQLMKLAGNQEE 662 Query: 564 EI-IAGLTGYEAFMEL 578 + + E E+ Sbjct: 663 VMALIEADTPEKIHEI 678 >UniRef50_B9Y7U3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7U3_9FIRM Length = 639 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 94/642 (14%), Positives = 210/642 (32%), Gaps = 68/642 (10%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 + +RQ +++ + + P + ++ +S RT+ DI+ +N++L A AG Sbjct: 1 MKKRQSELIRWILRSPGLPFETVLEKLKISKRTLYYDIEEINYSLRHCA--QLKKVAGQL 58 Query: 61 LEIFERRSFFQLLQK--------HDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERL 112 + + + + Q+L + + +L +L + F + Q+ L + + + + Sbjct: 59 VMVGDLQRVSQMLANQELTQQGTEEKLEFILYKILCDDFPRQEQMEQKLQISHSTMTYLM 118 Query: 113 PRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLS 171 L+ + + L G + I E + L D LI I+ + L Sbjct: 119 NELRDQLDAQGIELRYDEGT-YQIRGDENQIRDRFLYCLYNDNNLIN--RISDEILSFNQ 175 Query: 172 TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQ--IVEHSGLFLGDNA 229 + + + I A + ++ +W Q + + E + A Sbjct: 176 KNELGLADYSMALLSAMLRFIRLRMARQCRIRSDWTQETQAFRYRQSVAEDLNIADPLEA 235 Query: 230 VR---TLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLV-ENITGHLLRCLA 285 ++ L + Q I V L+ ++ I D +++ +I HLL Sbjct: 236 AYLTAFISSLTTLDAGEKQTIVDQGVTRLITCFESRMAVVIEDREMIRRSIAQHLLASYY 295 Query: 286 APVWIAEHRQSSMNNLKAAWPAAFDMSLHFI---TLLREQLDIPLFDSDLIGLYFACALE 342 + R ++ +K+ + F M + + E I + + YF L Sbjct: 296 RIQFQFPIRNFCLDEIKSRYFELFTMIRLILEDEQIFPEFKGIREEEIAFLTAYFGGVLR 355 Query: 343 RHQNER----QPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLI 398 ++ R + +++ ++ + Q+ IE+ V +++ SL L I + ++ Sbjct: 356 SQESHRRMRSRILLVCPQGLMVSKMLQIQIEQSVPLIQIVDQVSLQRLPQITAAYDYIVS 415 Query: 399 INNSHYLLDDAVNNYIT---------------VKNIITAAGIEQIKHFLATAFIRQQ--- 440 D + + + ++ + + Q Sbjct: 416 TMPIAGYDDKLIQVNPLLNRQDVCLLMEKCTGISMPDSVPEVQPLLQIIEKYCEIQNRPA 475 Query: 441 ------------------PERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADE 482 P +SWQ + LV I + Sbjct: 476 LVRELEALLYKHKEERGSPMLKELITSDKIRVLNHVDSWQSAIAEAAQPLVLDGSIDPEY 535 Query: 483 AQRIIAR-EGEGENLIV-NRLAIPHCWSE-QERRFRGFFITLAQPVEVNNEVINHVLIAC 539 Q +IA E G +++ +R A+PH R + + + V++ + +N Sbjct: 536 IQEMIASIEKYGPYIVLADRFALPHASGALHVHRLGMAILAVKEAVDLLGKPVNL-FAVL 594 Query: 540 AAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHK 581 A D+ ++ + L IL E + L+ + Sbjct: 595 ATVDSTSHIRALAELTEILYDQANIDKLCQGSAEEILRLIRQ 636 >UniRef50_C9ASX5 Transcriptional antiterminator n=18 Tax=Enterococcus RepID=C9ASX5_ENTFC Length = 549 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 68/547 (12%), Positives = 167/547 (30%), Gaps = 38/547 (6%) Query: 66 RRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCL 125 S Q + +L L QL+ + + +A + +K + + Sbjct: 3 EMSVIQYQESKLRRVAILNRLSNFEHVSYQQLSEEYYVSRSSIANDISYIKYVFAKEGLN 62 Query: 126 ASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN----LQHLSTACDNQHRWP 181 S G + + E + +L ++ + + D + S + Sbjct: 63 LSFDRFGTYFEGNEIQVQKVLKRMILNHFDELEIVREIVDRKLLAIVERSFRESIADKQI 122 Query: 182 LMQGDYLSSLILAIYALRNQLTDEWPQYPG-------------------DEIKQIVEHSG 222 + Y SS+I++I + +L + + + Q+ E Sbjct: 123 ELPESYFSSIIVSILLMIQRLREGKKISLKGKNQYGKYFLEFNKYPLVCELLHQLEEQRI 182 Query: 223 LFLGDNAVRTLTGL-------IEKQHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVE 274 V+ LT + +++ ++ + ++ L+Q+V +++ D++L E Sbjct: 183 YQFSQEEVQYLTYVIVGSGLRFFMKNETIPLVFREKIRQLIQKVSRGIQIDLTQDSRLEE 242 Query: 275 NITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--L 332 ++ HL + L ++ +K +P+ + + + R + L + + Sbjct: 243 DLLVHLYQLLLRIEAQTTIVNPLIDEIKQNYPSLYGVVWFALNDFRWPYQVSLSEDEVGF 302 Query: 333 IGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREE 392 + ++F A+ER + + + + + ++ I R + + I S+ +L + Sbjct: 303 VAIHFQAAIERVKRLNRLLFVCPNGMGTSSFVSAKIRRILPDIDSIETASVDKLNRLDLF 362 Query: 393 IEPLLIINNSHYLLDDAVNNYIT-VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSF 451 L+I V V + + Sbjct: 363 DVDLIISTVDIPKQIRPVVRISPMVTARDMKRIMNHYIDLVIDNEQINIEGSIAEKVKPL 422 Query: 452 HYSN---VRGESWQHITRQICAQLV-AQHHITADEAQRIIAREGEGENLIVNRLAIPHCW 507 SN +S + R + Q I RE + N AIPH Sbjct: 423 ISSNVYFDHFDSKEAAIRFLVDQQQFENEESKQRFLYSIFEREEIQSTYLENGFAIPHGN 482 Query: 508 SEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIA 567 ++ + +P + + V++ + E++ + + I+ Sbjct: 483 PNVVKQTSVAVLIADKPFSWGYQKADIVVLLMIREEDVKEVEPVMKMVMQGIEDKNWFIS 542 Query: 568 GLTGYEA 574 + Sbjct: 543 KMLEVRE 549 >UniRef50_C8P116 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P116_ERYRH Length = 625 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 81/631 (12%), Positives = 189/631 (29%), Gaps = 66/631 (10%) Query: 3 NERQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS-GSAGYQ 60 RQL I+ L Q T ELA + VS RTI ++I L L +S GY+ Sbjct: 4 TNRQLIIMHHLAQGNTVTAQELALSSNVSIRTIKKEIQILREILKSYQIEVSSIPGHGYR 63 Query: 61 LEIFERRSFFQLLQK-----------------HDNDDRLLALLLL-NTFTPRAQLASALN 102 L + ++ + + L+ LL + + LA + Sbjct: 64 LNPLDEDQEEKIFENIGSISLIRRMNSFSRNNSERVSYLIRTLLEASDYLKIEDLAERMF 123 Query: 103 LPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAG 161 + T + L ++ + R L SRP G + +E + A + + + Sbjct: 124 VSRTTIHNDLKDVRLQLRRFQLELKSRPAYGLKLTGSEFNLRLAFAEYFFHNTLSLVESK 183 Query: 162 ITRDNLQHLSTACDNQHRW--------PLMQGDYLSSLILAIYALRNQLTD----EWPQY 209 + + T + L+ L ++ + I L + + + + Sbjct: 184 EKEPFILNKDTLFKTEEIVKESCFKVNILLSDFSLQNIAVHILILFKRRREGHRIDIHKT 243 Query: 210 PGDEIKQIV---------EHSGLFLGDNAVRTLTGLIEKQHQQA-----QVISADNVQGL 255 + + + + L + L ++ + A + + Sbjct: 244 TDSLLLPLARTIANAVSTLLNEVVLEKPELLYLAIHLDSKQIIAHSGKTDAQDEALIYDI 303 Query: 256 LQRVPGIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 + ++N +D +L + H+ + + R ++ + A +++ Sbjct: 304 FTEIDNNFAINFLDNHELFRYLLLHIPQMIKRIQNGLTIRNPLIHRNLREFLFAAKVTIS 363 Query: 315 FITLLREQL---DIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQL-AIER 370 ++++ I L + + LYF AL ++++ I N + R Sbjct: 364 AVSVIEANYPDISINLDEFGYLLLYFQGALMTRRHQQTLNIGFIGGNGRSETIVYGQTLR 423 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 + I L I ++++ + + V Sbjct: 424 EYFKNDHITVSVYGSLQEITQDLDIGVSMAKMSIPQAREVVAI-------EDGNYLTHIE 476 Query: 431 FLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIARE 490 F + + + N+ G + + + + + + + A Sbjct: 477 QKIKQFDLAEADLDHYLKPQYVIYNLPGNNKEQVLHNLTDTMNTMNLLKPHYDSNPFATH 536 Query: 491 GEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKI 550 I + L + R F L +P+ + ++ + + D H+L Sbjct: 537 E-----IGHNLVHLQDLKKHVDRALCFVAVLEKPIIWDKSEVHVLFLIKTKRDGDHDLFY 591 Query: 551 FSYLASI--LCQHPAEIIAGLTGYEAFMELL 579 S + + + + ++ F + L Sbjct: 592 LCDRFSKWSMDRFKVQQLIEGQSFDDFKQAL 622 Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 28/287 (9%), Positives = 93/287 (32%), Gaps = 29/287 (10%) Query: 73 LQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE-RTCCLASRPGL 131 ++ + ++ L +LA + N+ + + + L++ + ++S PG Sbjct: 1 MEFTNRQLIIMHHLAQGNTVTAQELALSSNVSIRTIKKEIQILREILKSYQIEVSSIPGH 60 Query: 132 GHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACD---------NQHRWPL 182 G+ ++ +E + + + + + +R+N + +S Sbjct: 61 GYRLNPLDEDQEEKIFENIGSISLIRRMNSFSRNNSERVSYLIRTLLEASDYLKIEDLAE 120 Query: 183 MQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLG-----DNAVRTLTGLI 237 +++ + +R QL + + F + L+ Sbjct: 121 RMFVSRTTIHNDLKDVRLQLRRFQLELKSRPAYGLKLTGSEFNLRLAFAEYFFHNTLSLV 180 Query: 238 EKQHQQAQVISADNV---QGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHR 294 E + ++ +++ D + + +++ ++ + D L +NI H+L Sbjct: 181 ESKEKEPFILNKDTLFKTEEIVKESCFKVNILLSDFSL-QNIAVHILILFKRRREGHRI- 238 Query: 295 QSSMNNL-KAAWPAAFDMSLHFITLLREQLD---IPLFDSDLIGLYF 337 ++ K ++ + L+ + + + ++ Sbjct: 239 -----DIHKTTDSLLLPLARTIANAVSTLLNEVVLEKPELLYLAIHL 280 >UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D455_9CLOT Length = 639 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 88/648 (13%), Positives = 207/648 (31%), Gaps = 84/648 (12%) Query: 2 LNERQLKIVDLLEQ--QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR-IFASGSAG 58 L +R+ I++ L + T +LA G S RTI DI LN + I + + G Sbjct: 4 LEKRKAVILNTLLEREDYITAQQLAAIAGASVRTIKSDIAALNKLVENCGVQIHSVPNRG 63 Query: 59 YQLEIFERRSFFQL----------------LQKHDNDDRLLALLLLNTF-TPRAQLASAL 101 Y+LE E +L ++ L+ LL+ + +LA + Sbjct: 64 YRLEQGEDADLSELSLLMDDSELRRFYKVPQDANERIYYLIRKLLVVDYPLETGELADEI 123 Query: 102 NLPETWVAERLPRLKQRYER-TCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + E V L + + + L ++ +E + + ++ + I Sbjct: 124 YVSEPTVVRDLQKARIILAKRNLKLVMEKKGNVRLEGSELNKRLAISEFFFHNEKHIGKE 183 Query: 161 ------GITRDNLQHLSTACDN--QHRWPLMQGDYLSSLILAIYA--------------- 197 G+ R ++ + + ++ LS+L++ ++ Sbjct: 184 ENVFRDGLNRQEVEGIRIILRLVCREFSIVLSDASLSNLVIHVFIALTRYRFYNFIEADE 243 Query: 198 -------------LRNQLTDEWPQ-----YPGDEIKQIVEHSGLFLGDNAVRTLTGLIEK 239 +LT+ + P DE+ H + + + Sbjct: 244 ALQAEYRDAVEYAAAKRLTEALEEAYDFVIPDDEVIYYAMHLRVKRIYDEIPL------- 296 Query: 240 QHQQAQVISADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSM 298 Q +V + + ++ D +L + H+ + R + Sbjct: 297 -TDQERVRINQCISQCFWEIYEEYGVDFSQDQELRHYLYQHIPLMIIRLKNHMSFRYPQV 355 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLF--DSDLIGLYFACALERHQNERQPIILLSD 356 + +++ + ++ ++ + + + + + +YF AL + ++ ++ I + + Sbjct: 356 LDKPSSYLFSIKLTYIVTDVIGRFYQVGVNAQEFEYLAIYFCFALLKSRSGKRICIGVYN 415 Query: 357 QNA-IATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYIT 415 T+ R R + + E + I ++ L + + Sbjct: 416 GGGRAETVMYFNAVRGAFLEEDYEVRIVDYGDLFQRERGTVDICVSTCSLEEPTGAEVVM 475 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQ 475 +++ I++I+ + R + PG ++G I R + L + Sbjct: 476 IRD---RTYIQEIRRAIYRHKTRSLDWGTYFPPG-CVTPCLKGREPAKILRNLRDILAER 531 Query: 476 HHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHV 535 G + N + + H + R+ F L +PV + EV + Sbjct: 532 DI----FPAEGPEEPGFKCLEVGNGVILVHDPGHRCRKGFFFLGVLERPVIWDMEVAKIL 587 Query: 536 LIACAAADARHELKIFSYLAS--ILCQHPAEIIAGLTGYEAFMELLHK 581 ++A A L+ Y+ S + +I+ +M + + Sbjct: 588 VMADTADRRDPGLQTLCYILSKWMTNCKGEDIMEKQWDDREWMRFMSE 635 >UniRef50_C3WDH7 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH7_FUSMR Length = 675 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 93/673 (13%), Positives = 217/673 (32%), Gaps = 94/673 (13%) Query: 1 MLNERQLKIVDLLEQQPRTP--GELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML R KI+ L Q + ++A+ VS RTI ++D +N LN + +I + Sbjct: 3 MLTSRSTKILKFLLSQDKKIFLKDIAEYFKVSERTIRYELDKINEELNKENQILLNKGEC 62 Query: 59 YQLEIFERRSFFQ-----LLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLP 113 + I E + + + +L + L ++ L+ L++ + V L Sbjct: 63 FIENIEEIEKILNENTPYIPSSKERELFILLNICLIRKIKQSTLSDFLDISISTVKAHLR 122 Query: 114 RLKQRYE-RTCCLASRPGLGHFIDETEEKRVI--LLANLLRKDPFLIPLAGITRDNLQHL 170 +++ + L P G I+ +EE+ L A L K L I + L + Sbjct: 123 DIRKVLDVYGLKLEILPKKGLVIEGSEEQIRQCTLKAITLCKREKSKFLDNIIYEYLGDI 182 Query: 171 S------TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLF 224 + Q + D +IL L + + +E++ + Sbjct: 183 NQEGIKLFINYCQKLMEKIISDEAYDIILKYITLVIYFNKNDNKIKNIKNSNFLENTKEY 242 Query: 225 -------------------------LGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRV 259 + D + + T I + + V V+ +++V Sbjct: 243 EAIIQSKALLEGFYEMEFSKEEYLKITDYFLGSHTYNITYSYYENWVEIEIMVKSFIEQV 302 Query: 260 PGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 ++I D L+ + H+ + E S + ++P F + + Sbjct: 303 NKELEVDIANDETLILGLINHIKPTIYRIKNGIELENSIYGEVVESYPNLFSIIKKAVEK 362 Query: 319 LREQLDIPLFDSD--LIGLYFACALERH----QNERQPIILLSDQNAIATINQLAIERDV 372 L + I + + + ++F A++R+ + + + +I+ + + I +D+ Sbjct: 363 LENFIGITFTNDEIAFLTIHFKAAIDRNIKIKKEKLKVLIVCGSGYGSSKLLAQQI-KDI 421 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF- 431 ++ A L + + LI+ + + I V I++ I+ + ++ Sbjct: 422 YRVEIVDAIPRYLLEKVERRKDIDLILTTVPLDNFNTNRDVIRVNPILSKEDIQSLDNYP 481 Query: 432 ----------------------------------------LATAFIRQQPERFFSAPGSF 451 L +++ F P S Sbjct: 482 VPRDNKKILFSQLIKVLEDNSNIVVTEKLLKSLKNFLDTKLIDDICQKKNTIFDLLPESR 541 Query: 452 HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA--REGEGENLIVNRLAIPHCWSE 509 + ++W+ + L+ I D ++ +E L V + PH ++ Sbjct: 542 IIIKGKAKNWEEAIIETGNLLLRDGCIKEDYIDEMVKIVKEFGNYILFVPGVIFPHAKAK 601 Query: 510 Q-ERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIA 567 + + ++ + IN V+ C+ H + + + + + Sbjct: 602 SKVSKTGFSLAIYEEGIDFIDGNKINVVISFCSQDGREHLDSLVEIIENFEENELLKKLK 661 Query: 568 GLTGYEAFMELLH 580 + ++ ++ Sbjct: 662 RCKNSKDVLKCIN 674 >UniRef50_C6DIT7 Transcriptional antiterminator, BglG n=5 Tax=Pectobacterium RepID=C6DIT7_PECCP Length = 516 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 73/514 (14%), Positives = 174/514 (33%), Gaps = 74/514 (14%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAG 58 L RQ +++ L Q T ++A VS +T+ RD+ ++ L+ AG Sbjct: 5 LTSRQNRLLKYLLQHQGYVTVKDIAHYLDVSEKTVYRDMQFVEAFLSVWNIYPDKKVGAG 64 Query: 59 YQLEIFERRSFFQLLQK-------------HDNDDRLLALLLLNTF--TPRAQLASALNL 103 L + R L Q+ + ++ + LL +T T ++L+ + Sbjct: 65 IMLTTDDDRHLTLLEQQIVVDDGETDALINNARRVKIASQLLSDTPHETSISKLSERYFI 124 Query: 104 PETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRK----------- 152 + L ++ R G I+ +E + +A+L+ Sbjct: 125 SSASIVNDLKIIESWLHPLGLALVRSQSGTHIEGSENQVRHAMASLINDVMHHKEPGPLN 184 Query: 153 -----------------DPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYL------- 188 + + + + +D + LS + + + Sbjct: 185 HSRLDPGSYKALINYFGEEDVSFVESLLQDMERQLSYPLGEPYYINIFTHTLIMMHRIAQ 244 Query: 189 -SSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEK-------- 239 +L++A ++ Q+ + + + QI + L + V + I Sbjct: 245 GKALMMAEESVHQQVDNRIFSIAQNMVSQIEQRVESTLPSDEVWFIYQYIISSGIVMEER 304 Query: 240 ------QHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAE 292 ++Q + S L Q + ++++ D L E + H+ L + Sbjct: 305 ADNQLLRYQFSNGESRRITHALTQIFSDLINIDLRTDKLLHEGLLIHIKPLLNRLKYQIH 364 Query: 293 HRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIP---LFDSDLIGLYFACALERHQNERQ 349 R ++++K+ + +DM+ + + ++ + + + ++F ALER ++ Sbjct: 365 IRNPLLDDIKSEFIDIYDMTQQAMDEVCQRFQLKPVAEDEIGYLTIHFQAALERQIAHKR 424 Query: 350 PIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDA 409 +++ S + + + I R + ++ S S + ++ E LII+ H Sbjct: 425 ILVVCSSGVGTSHLLKNRILRAFPDWIIVGVVSASNMQRFCQQEEIELIISTIHLEEQH- 483 Query: 410 VNNYITVKNIITAAGIEQIKHFLATAFIRQQPER 443 + V I+++ + + Q Sbjct: 484 -IPVVYVSAFFNDDDIKRVTEKVIANQLHQAVPH 516 >UniRef50_C1IA41 Transcriptional antiterminator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IA41_9CLOT Length = 632 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 84/633 (13%), Positives = 201/633 (31%), Gaps = 61/633 (9%) Query: 5 RQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIF-ASGSAGYQL 61 R KI++ L A VS +TI ++ YL + GY + Sbjct: 2 RNRKILEQLFNSDTYLNLDYFADFFKVSTKTISNNMKYLIKDGKNNGFDIRLKRARGYYI 61 Query: 62 EIFERRSFFQLLQ----------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAER 111 EI + +F ++ ++ ++ LLL F LA +++ ++ + Sbjct: 62 EINNKDAFNSYIEKISFNETFSPEYRTSYIIVLLLLNRDFITMDYLAEKISVSKSIIKSD 121 Query: 112 LPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHL 170 + +++ + R L + G I + R + I + L+ Sbjct: 122 MRKVELELDSRNITLEKKAHYGIKIQCDDYTRKKFILMYYEDGNEFIN--NYIENGLKER 179 Query: 171 STACDNQHRWPLMQGDYLSSLILAIYALRNQLT--------------------------D 204 + L++ + L++ + + + + + Sbjct: 180 NFKVIENKLIELLKENSLNTNYIELEQINSFIKITICIHNEVYNNYFNYEKEKSTYFRVA 239 Query: 205 EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIAS 264 + +EI I + + ++ +++ +Q + Sbjct: 240 DELSNTIEEIYDIKLNENELIDLKKYLIKKTKKFTYNEIYIEDLRKDIERFVQEIDCEYD 299 Query: 265 LNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL 323 N D + +N+ H+ + + + +P FD+++ F + + Sbjct: 300 TNFYEDEEFKKNLLYHISLLINRLQKETSFSNPLVKEISIKYPTIFDIAIKFSNEIEGKY 359 Query: 324 DIPLFDSD--LIGLYFACALERH-----QNERQPIILLSDQNAIATINQLAIERDVLNCR 376 I + + I +FA LE+ +N + I+ S A + +L +E + Sbjct: 360 KISISQDEIGFIATHFAAHLEKEIYNKIRNYNKIAIICSSGKGSALLMKLKLEMLFSSSD 419 Query: 377 VIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAF 436 + R+ S L E II + L + V +I I +I++ + Sbjct: 420 I---RTYSLLDEDEVENFNPDIIFTNWQLSRGFKMPVVYVDELIDDLDILRIRNIIKMKR 476 Query: 437 IRQQPERFFSAPGSFHYSNVRG-----ESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + + ++ + ++ + A ++ + A II RE Sbjct: 477 TSNSFIKTNKEFMNLFKKETFRVVTKNNNYMELLEEMAKGVEALGYVDENYASYIIEREE 536 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLA-QPVEVNNEVINHVLIACAAADARHELKI 550 + N +AIPH + + + N + + + + L + Sbjct: 537 YMSTIYDNGVAIPHPINICGKDNLLSVAIIKNNNFTHNKKPVKIIFMVALEKGNMDYLGM 596 Query: 551 FSYLASIL--CQHPAEIIAGLTGYEAFMELLHK 581 + + + ++ E + G +E F+ L++ Sbjct: 597 VTQILFEIMKDEYLVEKLRGSETFEDFLINLNE 629 Score = 41.9 bits (97), Expect = 0.067, Method: Composition-based stats. Identities = 51/522 (9%), Positives = 144/522 (27%), Gaps = 23/522 (4%) Query: 77 DNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPR-LKQRYERTCCLASRPGLGHFI 135 N L L +T+ A + ++ + +K + + G++I Sbjct: 2 RNRKILEQLFNSDTYLNLDYFADFFKVSTKTISNNMKYLIKDGKNNGFDIRLKRARGYYI 61 Query: 136 DETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAI 195 + + + + P + + L D L + +S I+ Sbjct: 62 EINNKDAFNSYIEKISFNETFSPEYRTSY-IIVLLLLNRDFITMDYLAEKISVSKSIIKS 120 Query: 196 YALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGL 255 + +L + ++ L + I + Sbjct: 121 DMRKVELELDSRNITLEKKAHYGIKIQCDDYTRKKFILMYYEDGNEFINNYIENGLKERN 180 Query: 256 LQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNL---KAAWPAAFDMS 312 + + + + L N L + + NN + F ++ Sbjct: 181 FKVIENKLIELLKENSLNTN-YIELEQINSFIKITICIHNEVYNNYFNYEKEKSTYFRVA 239 Query: 313 LHFITLLREQLDIPLFDSDLIGL------------YFACALERHQNERQPIILLSDQNAI 360 + E DI L +++LI L Y +E + + + + D Sbjct: 240 DELSNTIEEIYDIKLNENELIDLKKYLIKKTKKFTYNEIYIEDLRKDIERFVQEIDCEYD 299 Query: 361 ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII 420 + + L + + + + I + D A+ ++ Sbjct: 300 TNFYEDEEFKKNLLYHISLLINRLQKETSFSNPLVKEISIKYPTIFDIAIKFSNEIEGKY 359 Query: 421 TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA 480 + + F+AT F + ++ +++ + S + + +L + Sbjct: 360 KISISQDEIGFIATHFAAHLEKEIYNKIRNYNKIAIICSSGKGSALLMKLKLEMLFSSSD 419 Query: 481 DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA 540 ++ + + + R F+ + + + ++ + +++ I Sbjct: 420 IRTYSLLDEDEVEN--FNPDIIF--TNWQLSRGFKMPVVYVDELID-DLDILRIRNIIKM 474 Query: 541 AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG 582 + +K ++ + ++ Y +E + KG Sbjct: 475 KRTSNSFIKTNKEFMNLFKKETFRVVTKNNNYMELLEEMAKG 516 >UniRef50_B0MBK6 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MBK6_9FIRM Length = 697 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 101/693 (14%), Positives = 218/693 (31%), Gaps = 115/693 (16%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +N+R +IV LL ++ T A+ VS +TI D+ +N LN R +G Sbjct: 1 MNQRSTEIVQLLSKEKDEITVSGFAEYFQVSQKTIRNDLKEINTILNQNQREEVLIQSGG 60 Query: 60 QLEIFE--RRSFFQLLQKHDNDDRLLA----------LLLLNTFTPRAQLASALNLPETW 107 ++ E + S LL+ + +L ++ + A +A L + Sbjct: 61 RINPPENFKESLSLLLEGDFYNYKLSRKERRQAASAMIVNSADYITLATIADHLFVSRAT 120 Query: 108 VAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGIT--- 163 V L +K E + S G I+ E ++ L NLLR + Sbjct: 121 VINDLKDIKAFIREGNLNVISHANKGLRIEGAESEKRNFLLNLLRPSLSIYENHKNVVAE 180 Query: 164 -------RDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQL------------TD 204 ++ Q + +IL + + N+ Sbjct: 181 HVSVQAGDSSVIQKILGEQEQRYKKYLDDSSFREIILYLRIMVNRNQMGEFLEPQPDTNS 240 Query: 205 EWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLI-------EKQHQQAQVISADNVQGLLQ 257 E + D +K I ++ + ++ ++ + + + + VI + + Sbjct: 241 ENYMFALDTLKYISQYCDVVTTEDDIKYFSRFLDGVRYMNNSRFSKNTVIIQMITRQYIS 300 Query: 258 RVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFI 316 + +++ D EN++ HL +AP + +N + + + + Sbjct: 301 GISSELGIDLNADYDFFENLSNHLGSIFSAPPIDYQEVD-VINEVLEDNQDVLEAVNNQM 359 Query: 317 TLLREQLDIPLFDSD--LIGLYFACALERHQNER---QPIILLSDQNAIATINQLAIERD 371 ++ + + L + + I ++ A+ER +N+ + I+ + + ++R Sbjct: 360 FVIYQYTERQLNEIEIKYIAVHVCAAIERKKNKEVAFRVIVACHAGIGTSRLLLEKLKRH 419 Query: 372 VLNCRVIIARSLSELVAIREEIEPLLIINNS----------------------------- 402 RV+ S E ++I +I Sbjct: 420 FK-FRVVDVISAHEAMSIEPNAADFVISTVPLEGCSLEYVVVSAAFNDADYIRVGNRIDA 478 Query: 403 --------------------HYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE 442 + + +++++ + F + Sbjct: 479 LRNCRNFPVRMEEDGLSAKGLIDEIHPLVYSMIEPEEKAKTFMKELRRVIRDYFKQSVEN 538 Query: 443 RFFSAPGSFHYS--------NVRGESWQHITRQICAQLVAQHHITADEAQRIIA--REGE 492 H+ +V E W+ R+ +LV + +I + +I E Sbjct: 539 ETEVLSPYLHHLLPAMNIEVDVECEDWKDAVRKSGEKLVERGYIESRYIDAMIHSIEEYG 598 Query: 493 GENLIVNRLAIPHCW-SEQERRFRGFFITLAQPVEVNNEVINHV--LIACAAADARHELK 549 ++ A+PH E R I L PV E ++ + + +A D + LK Sbjct: 599 SYVVLSKGFAMPHAKVEEGSIRLGMHLIRLKNPVPFGVEELDPIEFVCCLSAIDHKSYLK 658 Query: 550 IFSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 F L ++L +++ E ++ K Sbjct: 659 AFFSLVNMLRDAEYRQMLHEAECPEEMAGIIEK 691 >UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 Tax=Anaerococcus RepID=C2BGB6_9FIRM Length = 698 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 83/654 (12%), Positives = 195/654 (29%), Gaps = 75/654 (11%) Query: 1 MLNERQLKIVDLLEQQ---PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFA-SGS 56 ML++R+++I+ L + T E+ G S +TI +I+ ++ + Sbjct: 41 MLSDREIRIIKFLYKNKDKYCTSTEIGYNVGFSEKTIRTNINLISENVPKNIFEIVAKKG 100 Query: 57 AGYQLEIFERRSFFQLLQKH---------------DNDDRLLALLLLNTFTPRAQLASAL 101 +G++L I + + + K L LLL N L L Sbjct: 101 SGFKLVIGDHDKYIDYIYKSKASMSNLDQIYDKKGREKYILENLLLENKALTFDDLLEIL 160 Query: 102 NLPETWVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA 160 + E+ + + L+ + + + I E ++ + + + Sbjct: 161 FVSESTLQRDIYSLRNKLKDYGLDIVKDDNSYLSISGKELEKRHFILDFFFSSIYSNSFI 220 Query: 161 GITRD--------NLQHLSTACDNQHRWPLMQGDYLSSLILAIYA--------------- 197 D Q L D + + DY ++ +A Sbjct: 221 NELEDLNLFHKATISQLLIILLDEIREYGISVNDYAIQNLVIHFALVIERVKINCLIDNY 280 Query: 198 ---LRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQG 254 + DE+ + I++I + + L + + + + + + S + + Sbjct: 281 DKDIAKGEGDEFLDFAKSVIRRISKSFAIDLPIEEKKYIYLQLLSKTKLSSENSIKSFKD 340 Query: 255 ------LLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 LL+ + ++N++D + N HL + +K + + Sbjct: 341 YNQVIDLLRYLSKKLNINLLDDNVFMNNFIEHLKALENRVASGLYISNPLTDKIKTQYTS 400 Query: 308 AFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQ--NERQPIILLSDQNAIATI 363 FD+ + ++ + D + + +Y ALER++ + +++ + + + Sbjct: 401 YFDLVVDSFKKFSIFENMDITDDERSYLVIYILSALERNKFNKKINVLVVCASGFSTGLM 460 Query: 364 NQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAA 423 + I+ + N I + + + LII++ + V + Sbjct: 461 LKNRIQNEYTNTINIKNVIGYYEITPKNLDDVDLIISSVDLEGLVIAVPSVKVSVFLDED 520 Query: 424 GIEQIKHFLAT--------------AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQIC 469 I + N + + I Sbjct: 521 DCALIDKEVEKLIKSYQDLRSDEQIVPNTNLTLFEKYFSEKNFLINKNPCTKDEVLNLIY 580 Query: 470 AQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNN 529 L + + + RE G + +AIPH S + + F + + Sbjct: 581 KSLALTPEMEEIFRDQTLLRENFGSIVFKTLVAIPHPISPIKDKAEIFTVISKADISWGK 640 Query: 530 EVINHVLIACAA---ADARHELKIFSYLASILCQHPAEI-IAGLTGYEAFMELL 579 + ++ + + KI IL + + + F EL+ Sbjct: 641 DSDKLKIVFYISPPGKNDPDFEKIIKVFTKILKDDSLIQALINIENFIDFKELI 694 >UniRef50_Q18CM3 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=Q18CM3_CLOD6 Length = 637 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 83/633 (13%), Positives = 199/633 (31%), Gaps = 55/633 (8%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 LN+RQ ++ L +++ ++A S RTI D Y++ L+ + Sbjct: 4 LNKRQENLLTTLLLKEEFINVNKIANDFECSERTIRNDCKYIDEWLSTFCNAYIKRKPNI 63 Query: 60 QLEIFERRSFFQLLQKHDN-------------DDRLLALLLLNTFTPRAQLASALNLPET 106 ++ + L+ + + L LL N L++ L + + Sbjct: 64 GIKFSGDGTDKILVNQKLRGEVKRVNSELHKQVEILNLLLCNNKKVTLNDLSNKLYINKN 123 Query: 107 WVAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRD 165 V E + +L ++++ G G +I+ E+ I+L + L K L + Sbjct: 124 IVREEISKLSVALNNYNLNISTKKGSGIYIEGDEKDIRIMLVSFLFKYIDKYRLNIDEIE 183 Query: 166 NLQHLSTACDNQHRWPLMQGDYL-------SSLILAIYALRNQLTDEWPQYPGDEIKQIV 218 + + + + L+L + ++ + K++ Sbjct: 184 YFHIVDIIIVKNIMLTIEEDMDIRLTDISFKQLMLFLLINIIRIRLGNSLKVSNTKKELK 243 Query: 219 EHSGLFLGDNAVRT------------------------LTGLIEKQHQQAQVISADNVQG 254 + ++ +++ + K+ A + Sbjct: 244 LKMLILDIEDELKSNLSIVLNYEEKLFIESLILGMNKQINSNNIKKSLYLNEELASYTKK 303 Query: 255 LLQRVPGIASLNIIDAQL-VENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSL 313 ++ V + +N + L E + HL + ++N+K + F + Sbjct: 304 IINLVSEESGINFNNDILLYEQLICHLNVTMHQMKSNVYLENPLLDNIKTKFCFLFTVIS 363 Query: 314 HFITLLREQLDIPLFDSDLIGLYFACALER----HQNERQPIILLSDQNAIATINQLAIE 369 I + + I + + L+F +LER ++ ++ I+ ++ + ++ IE Sbjct: 364 SSIEIELKGKQITEGEIGYLTLHFQTSLERKYSKRESNKKASIVCPFSFGVSMLLKVKIE 423 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIK 429 + N ++I +L II Y T + Sbjct: 424 KRFDNIKIIETLREEDLKRDNFNKTIDFIIAFQEYENIQKPIFITTPLFTDEDENKLKEF 483 Query: 430 HFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAR 489 + + + + L+ +H+ + Q II R Sbjct: 484 TNKIKEKDTSYKLMNRLMMSDYLIRELEHDDIYEAITYLTNLLIEKHYAEKEYLQSIITR 543 Query: 490 EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHEL 548 E + + PH + ++ F L P+++ N + I +L+ D ++ Sbjct: 544 EKSYPTNVGKGILFPHGDMKYIKQSVLCFARLKTPIKIRNGKDIKIILLLAYKKDDDRKV 603 Query: 549 --KIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 ++F ++++ I E ++L Sbjct: 604 FRELFKEISNLTEDENMLDILSKCDIEKVKDIL 636 >UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETM8_9FIRM Length = 711 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 104/689 (15%), Positives = 216/689 (31%), Gaps = 113/689 (16%) Query: 2 LNERQLKIVDLLEQ----QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA 57 L R KI+ +L + P T G ++++ GVS R++ R++ + + F + Sbjct: 3 LTPRADKIIRILLRFSPDSPVTIGIISEELGVSDRSVQRELPTVEKWMKHNGFCFVRKRS 62 Query: 58 GYQLEIFERRSFFQ---LLQKHDNDD-------------RLLALLLLNTFTPRAQLASAL 101 L + LL + D + LLL Sbjct: 63 VGLLIDETPERLKELAALLDEKDTNSSAPADNRPERLTLLCHDLLLAEEPIKSYYFTEKF 122 Query: 102 NLPETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLL---------- 150 + E + L +L+ + + L RPGLG FI+ TE R L + + Sbjct: 123 EISEGTLTADLNQLETWFTKYQLKLVRRPGLGVFIEGTEIARRQALTSFICKQVNEHHSI 182 Query: 151 ---------RKDPFLIPLAGITRDNLQHLSTACDNQ------------------------ 177 F+ + G + H+ C Q Sbjct: 183 GNLQDKKFLSDRNFINEIDGEVMAEVNHILGGCQKQLGMQLSDNGYLHLLVYTSLCVQRM 242 Query: 178 ---HRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLT 234 ++ Y I YA+ + E Q+ I + E + + + R Sbjct: 243 QKGRFIKELKQSYAEISIQPEYAVSEYIMKELRQFFHLSIS-VDETIYMAVFISGQRIWP 301 Query: 235 GLIEKQHQQAQVISADNVQGLLQRVPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEH 293 + ++++V I +N D++L+ ++GH+ +A Sbjct: 302 SGSRDLTDIKNLDVHQITLSIIKKVNEILHINFMRDSRLLTELSGHIQPTIARLRAGIPV 361 Query: 294 RQSSMNNLKAAWPAAFDMSLHFITLLREQLDI---PLFDSDLIGLYFACALERHQNERQP 350 + + ++P+ + ++LL L I P + I LYF A+ER + E + Sbjct: 362 ENPLLKEFQESYPSVYKACEEGLSLLCPILGIKKVPASEIGFITLYFTMAMERIEKEIKK 421 Query: 351 I---ILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIE-PLLIINNSHYLL 406 + I+ + + +++++ + + S EL IR + E L+I+ + Sbjct: 422 LSVMIVCPTGIGSSRLLTESLKKEYPDLDIRGITSAFELDNIRLQEEGVDLVISTVKLEI 481 Query: 407 DDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPER----------------------- 443 YI V I+T + + +++ + Sbjct: 482 AYP---YIHVNPILTRQDKILLDSRIKVIQEQKRQAQEKEIKEPEVPSDSSICRKDVEFL 538 Query: 444 -------FFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENL 496 + + ++ I + + A + + R+ + Sbjct: 539 SAIGSEIYELLGNIYINQAPILKNRDEIISYCSSLYADTSDMQAHLYKILKDRDNLADTY 598 Query: 497 IVNRLA-IPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELK--IFSY 553 I A + H S + ++ L P+ +I +++ + E+ + S Sbjct: 599 IKPFQALLLHGRSTEISTSCFGYVRLEPPIYERGHIIRGAIVSLIPSGPASEVAAPVTSE 658 Query: 554 LASILCQHPA-EIIAGLTGYEAFMELLHK 581 + L + PA E F + L + Sbjct: 659 VIGALLEEPALLKALQSLNKENFTKQLEE 687 >UniRef50_B0MAW6 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAW6_9FIRM Length = 688 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 83/674 (12%), Positives = 195/674 (28%), Gaps = 96/674 (14%) Query: 2 LNERQLKIVDLLE---QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 +N R KI+ L + L ++ + RTI DI LN L + Sbjct: 1 MNRRSNKILKDLILGIHADVSG--LEEKYHIQERTIRADIKELNKDLEAYELPVIASDLD 58 Query: 59 YQLEIF---------------ERRSFFQLLQKHDNDDRLLALLLL-NTFTPRAQLASALN 102 +L I E + L K + L +LL + + QL + Sbjct: 59 GKLWIDTDKKVDIRAYEKFISEYDFYTYYLSKKERSTILAMILLNASGYVTVDQLKEKIG 118 Query: 103 LPETWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF------ 155 + + + L LK + E L S+ G+ I+ +E + LL + Sbjct: 119 VSRNTLLQDLQELKIWFKENGMTLVSQVRRGYIIEASELDVRKGILKLLEVNGDDNYYKN 178 Query: 156 ----------LIPLAGITRDNLQHLSTACDNQHRWPLMQGDY-LSSLILAIYALRNQLTD 204 L+ A + + + + + DY + + + N++ Sbjct: 179 GYDLSVFWNLLLKEADSLEIYEKMKNCILEEEEETQIFFADYSFFEAVTELTIVANRIVR 238 Query: 205 EW------------------PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQV 246 + + +I + + + + + T + + Sbjct: 239 KHFLPGYFTNEWNYLKEGSKYTFSKGLFGKISDMFQMDVREVEILYYTECLNGKSYLKDD 298 Query: 247 ISADNVQGL-------LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSM 298 N L + ++ ++ D L + + H+ + Sbjct: 299 AQKTNALELRVMIAETIYQISSCFGIDFYLDFTLYDLLVAHMRSAVHRLKNSEVLVNPLK 358 Query: 299 NNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN------ERQP 350 + L +P F+ + L + + + + + LYFA +E+ + + + Sbjct: 359 DTLMQDYPEIFESVKQHLGSLEDYVGQKFSEDEMSFMVLYFASVMEKEKAETEKSRKVKV 418 Query: 351 IILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAV 410 ++ + A ++ ++ S + I + ++I ++ Sbjct: 419 ALVCATGRGTAQFMMAKLKTLDDMIEIVSISSFHNMREIEKNGTQMIISTIPLDDVNIPY 478 Query: 411 N-----------------NYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHY 453 + ++ G E+ + + Q + Sbjct: 479 VEVRSPMLEKDDILDIQRKVLEIREGDGGEGKEREPEITSPPDVNIQGAFYDLLNEQRIQ 538 Query: 454 SNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV--NRLAIPHCWSE-Q 510 + W+ RQ L + + ++ IV A+PH +E Sbjct: 539 VGYEAKDWEDAVRQSGNLLHSTGAVEPGYVDEMVMNIKRNGPYIVVCPETALPHASAEQG 598 Query: 511 ERRFRGFFITLAQPVEV---NNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIA 567 + L +P++ NN+ + +V+ + I+ + + I+ Sbjct: 599 VIEEAASILRLKEPIDFHSGNNDPVRYVIGMSIQSAKSINSAIYDLMMIFGNEQIRRILD 658 Query: 568 GLTGYEAFMELLHK 581 L EA + + + Sbjct: 659 SLPDAEAVLNTIKR 672 >UniRef50_B0A8M3 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8M3_9CLOT Length = 643 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 85/632 (13%), Positives = 208/632 (32%), Gaps = 55/632 (8%) Query: 3 NERQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQL 61 + R K++ +LE ++ + L ++ VS ++I DI LN +G A I Y+L Sbjct: 8 DNRICKVLQILEHKRSASLEYLEKKLNVSTKSIKNDIKELNEIFDGNALIQFKLGK-YKL 66 Query: 62 EIFERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 + E + F + + K + L+ LA +++ T + Sbjct: 67 YVLEYKQFEKTKENLYLHDDFFNSPKKRMAYVISRLMNDENPVLTEDLAFEMSIGRTTLV 126 Query: 110 ERLPRLKQRYERT-CCLASRPGLGHFIDETEEK-RVILLANLLRKDPFLIPLAGITRDNL 167 L ++++ ++ + + G + E R+ +L NL + L ++ L Sbjct: 127 GDLKKIREALKKYNIEIVGKTNTGLKLQGEEIDLRLFVLENLYEEIYKDHELDYDVKEEL 186 Query: 168 QHLSTACDNQ---------------------HRWPLMQGDYLSSLILAIYALRNQLTDEW 206 + + + + H + Y + + N ++D Sbjct: 187 EKIFSDLKLEGSTRKQIIKFLTVLIDRLVNGHSIAELNETYEDLIYTDQINVSNNISDRI 246 Query: 207 PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLN 266 G +I E + L +RT + ++ + D V +++ + + Sbjct: 247 ENIFGVKIPD-NERVFMTLPIVGMRTPMDIDRVKNIEITEEVIDLVLDIIKLIKLEMDIT 305 Query: 267 IIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIP 326 I L++ T H+ L + + + ++ +K + + ++ L+ ++ Sbjct: 306 ITPGNLLDEFTYHISFMLNRLKYGIKIKNPVLDEIKEKYMVPYKLAELTKMLIEDRTKKK 365 Query: 327 LFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIAR--S 382 + + + +YF+ + + ER + ++ I I + I + Sbjct: 366 VSKDELGFLAVYFSVFISENSYERNKLCSIAIICGTGKITARLIAAQLRKIVDIDTKLEM 425 Query: 383 LSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPE 442 S+ +E ++ ++ ++ D V I +K I ++ P Sbjct: 426 FSDSQVNKELLDQFDLVLSTIKFECDTVTPIIYLKEIFDENQLKNKIESARYTEKLNIPM 485 Query: 443 RFFS-------APGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGEN 495 + +S+ + +L ++ +RI RE + Sbjct: 486 LQGMESLVLSLLDEEKFFILHSDKSYMENVDYMIDKLYDLSYVDEGFKERIHTRESKSTM 545 Query: 496 LIVNRLAIPHCWSEQERRFRGFFITL-AQPVEVNNEVINHVLIACAAA----DARHELKI 550 + +A+PH +++ + + + + + D +KI Sbjct: 546 VFDEYIALPHAINKETDKIVFSIGVFSDDKKHEKDSKLKVIFLLAIPDIEEKDDDILVKI 605 Query: 551 FSYLASILCQ-HPAEIIAGLTGYEAFMELLHK 581 + + +I E IA + Y + K Sbjct: 606 YDEIIAISKDKQVVENIAKVKNYRELLLYFIK 637 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 37/383 (9%), Positives = 102/383 (26%), Gaps = 18/383 (4%) Query: 69 FFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASR 128 + ++L +L L LN+ + + L + ++ + + Sbjct: 1 MSDYFNNDNRICKVLQILEHKRSASLEYLEKKLNVSTKSIKNDIKELNEIFDGNALIQFK 60 Query: 129 PGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYL 188 G ++ NL D F + L + L + Sbjct: 61 LGKYKLYVLEYKQFEKTKENLYLHDDFFNSPKKRMAYVISRLMNDENPVLTEDLAFEMSI 120 Query: 189 --SSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQV 246 ++L+ + +R L + G + V + + Sbjct: 121 GRTTLVGDLKKIREALKKYNIEIVGKTNTGLKLQGEEIDLRLFVLENLYEEIYKDHELDY 180 Query: 247 ISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHR--QSSMNNLKAA 304 + ++ + + ++ + I L + V + +L Sbjct: 181 DVKEELEKIFSDLK-------LEGSTRKQIIKFLTVLIDRLVNGHSIAELNETYEDLI-- 231 Query: 305 WPAAFDMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIAT 362 + ++S + + + + D++ + L R + + + + Sbjct: 232 YTDQINVSNNISDRIENIFGVKIPDNERVFMTLPIVGM--RTPMDIDRVKNIEITEEVID 289 Query: 363 INQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITA 422 + I+ L + I + L I +L + + V + I K ++ Sbjct: 290 LVLDIIKLIKLEMDITIT-PGNLLDEFTYHISFMLNRLKYGIKIKNPVLDEIKEKYMVPY 348 Query: 423 AGIEQIKHFLATAFIRQQPERFF 445 E K + ++ + Sbjct: 349 KLAELTKMLIEDRTKKKVSKDEL 371 >UniRef50_C6JIT2 Predicted protein n=2 Tax=Fusobacterium RepID=C6JIT2_FUSVA Length = 676 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 85/674 (12%), Positives = 207/674 (30%), Gaps = 95/674 (14%) Query: 1 MLNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG 58 ML+ + + ++ L ++ EL++ VS R+I +ID + L+ K S G Sbjct: 1 MLSRKSIDLLHFLLKEKRNIPLRELSEHFEVSERSIRYEIDKIQKELSEKDGFEFIISKG 60 Query: 59 YQL--------EIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 + + + + +L + + ++ L+ + + Sbjct: 61 ECFVDNYTTLEKYLNDSRQDYIFSPKEREIYILLKICFEREINQNVISEELDTSRSTIKV 120 Query: 111 RLPRLKQRYERT---CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 L +K+ + L + GLG +E + ++ L + K L I D L Sbjct: 121 HLRDIKKVLDEYNLELELLHKKGLGVSGEEEKIRQCTLKIMSMVKKSNSSFLKNILDDYL 180 Query: 168 QHLST------ACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIK------ 215 + + Q + D +I L + + + Sbjct: 181 EEIEIEGVKLFINYCQKLMNKIVSDEAFDIISKYLILAIYFNKKGYKITSIKNYNFLKNT 240 Query: 216 -------------------QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLL 256 ++ E L + D + + T I + + V V+ + Sbjct: 241 SEFECVEKSRALLEGFYEIELSEEEYLKITDYFLGSHTYNISYSYYENWVEIEMIVKNFI 300 Query: 257 QRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHF 315 R+ ++I D L+ + H+ + E + + ++P F M Sbjct: 301 NRINEKLDVDISADETLMTGLVNHIKPTIYRLKNGIELENTIYEEVVESYPNLFSMIKGS 360 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALERHQNERQ---PIILLSDQNAIATINQLAIER 370 + L + +D + + I ++F A++R+ +++ ++++ ++ + Sbjct: 361 VGELEDFIDNKFTNDEIAFITIHFKAAIDRNIKKKREKVKVLVVCGSGYGSSKLLAQQLK 420 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 D+ +I L + + + LI+ D I V I+T + ++ + Sbjct: 421 DMYRVEIIDTIPRYLLEKVNKRTDIDLILTTIPLDDFDTDKTIIKVNPILTKEDMAKLDN 480 Query: 431 FLATAFIRQQPERFFSAPGSF--------------------------------------- 451 + + ++ Sbjct: 481 YPISRDSKKIIFSELVEVIEKNSKIKADEKLLGALKTFLDSKLIDDLFHKKITISDLLSE 540 Query: 452 --HYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLI--VNRLAIPHCW 507 + W+ R+ L+ I + + +I + N I + + PH Sbjct: 541 KRIKLKGKAIDWRGAIREAGELLLRDECIEEEYIENMIKLVDDFGNYIMLIPNVIFPHTK 600 Query: 508 SEQ-ERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHELKIFSYLASILCQHPAEI 565 S+ ++ +T + ++ + I V+ C + H + + I + E Sbjct: 601 SKDLVKKTAFSIVTYDKRIDFLDEGKIGIVICFCVKDEREHLDSLIEIVEKIEENNLEEK 660 Query: 566 IAGLTGYEAFMELL 579 I + ++ L Sbjct: 661 IRKSKTAKDVIKYL 674 >UniRef50_A8S5N7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S5N7_9CLOT Length = 665 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 78/642 (12%), Positives = 202/642 (31%), Gaps = 69/642 (10%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +++R L++++ L +++ + EL G+S RT++ + LN I S + GY Sbjct: 26 MDKR-LELLEYLFAQKRNVSNRELQTALGISKRTVINYVKDLNSLAPN---IIHSSNQGY 81 Query: 60 QL--------EIFERRSFFQLLQKHDNDDRLLA-LLLLNTFTPRAQLASALNLPETWVAE 110 I + +S D L LLL T +LA + + + Sbjct: 82 FCPNPSAIQGTIAKLQSTQLFDTYSKRRDYLFKELLLKATHPSFEELAEQMYISTVTLNN 141 Query: 111 RLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKD---------PFLIPLAG 161 L RL+ + FI + + LL ++ Sbjct: 142 ELVRLRNELKEHSLYLKTKNNRLFIIGQDRDKRRFTMLLLNQELRQSHFKLENMQKFFQN 201 Query: 162 ITRDNLQHLSTACDNQHRWPLMQGDYLSSLIL---------------------------- 193 +T +++ + H + L +L+ ++ Sbjct: 202 VTINDISDMVRQTLRNHSYFLDDFSFLNYVLHLAICIETTLSRREVPDTINSVMDNYSFT 261 Query: 194 -AIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTG---LIEKQHQQAQVISA 249 I + + +I L +R++ E+ H Sbjct: 262 PHILEIVKDIHKNLTDIYHTDISFTQVLDASVLMTTRIRSVNLSSLNFEQIHTILPAQVC 321 Query: 250 DNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAF 309 + ++ V I +++ + HL + ++ +K +P + Sbjct: 322 GILFKIITAVHSIYGIDLKADNFMVRFAFHLKNLMDRAANSLVVPENYFITIKDDYPFLY 381 Query: 310 DMSLHFITLLREQLDIPLFDSD--LIGLYFACALERHQN---ERQPIILLSDQNAIATIN 364 ++ + +++ +++ L +++ I L+ +E N + +++L D + Sbjct: 382 VIAEYIASIIGQEIHAALPENEISYIALHLGVLMEEKNNAATKINCVMVLYDYYNMGVTI 441 Query: 365 QLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVK-NIITAA 423 I++ + + E + ++ ++ L + + Sbjct: 442 FEHIKQMAAPINLYGIVTSYEQIQNLSSVDLIITTLPEESDLGIPTIKIHLLPTRQDYES 501 Query: 424 GIEQIKHFLATAFIRQQPERFFSAP-GSFHYSNVRGESWQHITRQICAQLVAQHHITADE 482 + + R+ + + + S + + + +C ++ A +++ Sbjct: 502 ILLKATELTQNIHHRELARQIQQLFKKELFFPHTNFLSREEVIQFLCERMEASNYVDKAF 561 Query: 483 AQRIIAREGEGENLIVNRLAIPHCWSEQ---ERRFRGFFITLAQPVEVNNEVINHVLIAC 539 Q I+ E + N +A+PH + R P+ + ++ + + Sbjct: 562 HQEILYHEQVAPSAYRN-VALPHPLTADESLTRVSSIAVAINDHPIPWDTNQVDFIFLLS 620 Query: 540 AAADARHELK-IFSYLASILCQHPAEIIAGLTG-YEAFMELL 579 + R K +F+ ++S L + ++ F+ L+ Sbjct: 621 LRGEDRQLFKDVFTIISSFLQSDSNCRLLKSCDSFDTFVNLI 662 >UniRef50_C7T7M7 Transcription antiterminator, BglG family / PTS system, IIAB component n=2 Tax=Lactobacillus rhamnosus RepID=C7T7M7_LACRG Length = 680 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 110/677 (16%), Positives = 209/677 (30%), Gaps = 105/677 (15%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAGY 59 + +R L+I+ + + P G+L +Q ++ R + + +N L + + G Sbjct: 1 MKKRNLQILSEIIRHPNLRSGDLEKQFKITRRQLTYALAQINQELVDRQLPKITRTPRGE 60 Query: 60 QLEIFERRSFFQLLQKH--------DNDDRLLA----LLLLNTFTPRAQLASALNLPETW 107 + E FF L + D+R+L LL+ + L + T Sbjct: 61 FVTPSEVAEFFNLQNGETAAPYVYREEDERVLLICLYLLVSDEQLSLVHLYDFSGVSRTT 120 Query: 108 VAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN 166 + L + E R L G+FI +E+ LL L+ + R + Sbjct: 121 TSADLKIVAHFLERRQLALKYTRQAGYFIAGSEQIIRNLLNYLV----TQLLKYDDGRGS 176 Query: 167 LQHLST-----ACDNQHRWPLMQGDYLSSLILAIYALR---------NQLTDEWPQY--- 209 ++ LST H+ ++ S + L +Q T + + Sbjct: 177 IEQLSTVPPEQVIHFIHKIESVRHVTYSDESFSFLMLAVLMNVTRNLSQRTRDNHYFVHQ 236 Query: 210 -----PGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN-----VQGLLQRV 259 +K ++ L +A + L+ + +V AD ++ ++ + Sbjct: 237 INDTKEFSLLKPLIPKKWLVCDSDAEWIVMLLLSANTIRGEVGVADTDLVAAIRTMVSKF 296 Query: 260 PGIASLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLKA---AWPAAFDMSLHF 315 + I D V + HL + + + + A D Sbjct: 297 EQQTFIKIDDQKDFVNRLLAHLRPAIFRVRYGLHLHDIGIGQVMAADPRHQFLVDTINAI 356 Query: 316 ITLLREQLDIPLFDSD--LIGLYFACALER----HQNERQPIILLSDQNAIATINQLAIE 369 + L + P+ + + LI YF LE+ H N+ + ++ ++ ++ + + Sbjct: 357 VAPLEKLTGKPIPEDERNLIAFYFDGELEKSADLHANKERAAVVCTNGLIVSKLMIQNLR 416 Query: 370 RDVLNCRVIIARSLSELVAIREEIEPLLIINN-----------------SHYLLDDAVNN 412 R + A S E + + + L V N Sbjct: 417 RLFPEISFLSATSAREFEHFSGDYDLVFTTVPLKTSARQYIIHPLLSEDEQMQLRYRVLN 476 Query: 413 YITVKNI-----------------------ITAAGIEQIKHFLATAFIRQQPERFFSAPG 449 I VKNI A + T QQP+ Sbjct: 477 DIGVKNIQTGIAALTAIVRKHAKITDSEGLDQALRRFLADQGVETLPETQQPQLSAMTAS 536 Query: 450 SFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE---NLIVNRLAIPHC 506 S + + W+ RQ L ++T Q ++ E + I +AIPH Sbjct: 537 SLIQI-GQSDDWETALRQAIRPLEQLKYVTEPFRQTLMN-ETVAPDNYSFIGTEVAIPHT 594 Query: 507 WSEQ-ERRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHELKIFSYLASILCQHPA- 563 E R F L PV N I ++ L+ L+ ++ PA Sbjct: 595 VPENGVLRNGFAFYILKHPVTYPNGFRIRMIVPIAVKNTD-QHLRAIQELSELIADEPAL 653 Query: 564 EIIAGLTGYEAFMELLH 580 + + + E+L Sbjct: 654 KQLLKSKTNQQAYEVLQ 670 >UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-binding protein n=3 Tax=Staphylococcus RepID=B9CU63_STACP Length = 675 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 100/662 (15%), Positives = 217/662 (32%), Gaps = 84/662 (12%) Query: 1 MLNERQLKIVDLLEQ---QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA 57 +L+ R+ +I+++L + Q T ++AQQ VS RTI R++ + L+ + + Sbjct: 2 LLSTREKEIIEILIKYHGQYVTIYDIAQQLAVSSRTIHRELKQIESYLSTFSIQLERANK 61 Query: 58 GYQLEIFERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPE 105 E + +L + + L AL+ + LA + + Sbjct: 62 KGIRLSGEANNIRRLKEAVTTQQTLDLSIEEQKVIILYALIQAKHAIKQFSLAHEIGVSI 121 Query: 106 TWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITR 164 +A+ L L++ L+ + G G ++ E K+ L+ L+ + + + Sbjct: 122 QALAKLLDDLEEELLSYQLSLSRKRGEGVYLKGPESKKREFLSQLMVNNLNSTSVYSVIE 181 Query: 165 D---------------------NLQHLSTACDNQHRWPLMQGDYLS---SLILAIYALRN 200 + ++ + Q + L + YL+ ++L+I ++N Sbjct: 182 NHFVYQSLNHSQQSLVDLDRIFKIERILMDYLGQLPYTLTESSYLTLTIHIVLSITRMQN 241 Query: 201 ------------QLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGL--------IEKQ 240 + D + EI + +E + A T + K Sbjct: 242 GEYVSLNKDIYETVKDTFEHEVATEIAKRLEEIHNVEFNQAEITFITIHLRGAKRKGTKD 301 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMN 299 + S+ ++ + V I+ + D + L+E +T H+ + E Sbjct: 302 SNSEEDNSSKKIRQFVNTVTRISGQHFKDKENLIEGLTLHINPAINRLKSNIETYNPLTE 361 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNE-RQPIILLSDQN 358 +K +P F+ + ++ L P + I L+F +++ N +++ S Sbjct: 362 MIKFKYPRLFETIHKALHMVWSDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGI 421 Query: 359 AIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNY----- 413 + + +E+ I S+S+L + +I + + + Sbjct: 422 GTSRLLANRLEQVFSEIERITQASVSDLNVLDLNNYDGIISTVNLDIEAPFLIVNPLLPE 481 Query: 414 ----------ITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQH 463 T N A + F Q S ++W+ Sbjct: 482 HEVSYVASFLSTNSNQTLLAENDNSNTFTNPEETIQDMRIGLEVLDSVKIEYKLVDNWKQ 541 Query: 464 ITRQ--ICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITL 521 + ++ H AD Q + L +AIPH ++ L Sbjct: 542 YLETYLLNENIIEDRHSFADLLQSKFE-QNPNWVLHPYPVAIPHLKDNMFKKPSILITIL 600 Query: 522 AQPVEVNNEVINH----VLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFME 577 +P+++ + LI+ D + + S L+ L +H +I + F Sbjct: 601 EEPIQLQRNQNDLNSVHYLISMFTPDNQKMAQFVSALSEALSEHLNDIEEFMQNPYEFKT 660 Query: 578 LL 579 +L Sbjct: 661 IL 662 >UniRef50_C9BPG8 Transcriptional antiterminator bglG n=7 Tax=Enterococcus faecium RepID=C9BPG8_ENTFC Length = 622 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 73/618 (11%), Positives = 192/618 (31%), Gaps = 45/618 (7%) Query: 2 LNERQLKIVDLL-EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 L R +++ LL + + E+ ++ S +TI +DI LN + + ++ Sbjct: 3 LVNRWYQLLKLLVTHKKVSIQEVQKEIKTSNQTIKKDIGELNEEI-AGIAKIIQKNKHFE 61 Query: 61 LEIFERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 LEI++ F +++Q L L+ F L+ + + V Sbjct: 62 LEIYDFDFFDEIMQGKLKTASDFNSASKRIAYLLNRLIETEDFLRMDDLSEEVGVSRGTV 121 Query: 109 AERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDN- 166 + L LK+ + P G I E + +LL + + Sbjct: 122 VKDLKTLKEMINDFDVKITGTPNKGLRIIGDELELRLLLFYFVSPYFSETKTEQFLEEKQ 181 Query: 167 ----LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYP-----------G 211 Q + A + + I + Y L+ + + Sbjct: 182 AIKHFQKKTNASKQEITLLTKVIGISLNRISSNYLLKKPINRYSGCFEYIQEFNELINQL 241 Query: 212 DEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQ 271 +EI ++ + + ++A ++ R+ + +++ ++ Sbjct: 242 EEIYELTLSQYEKDFISFPLNIINTSITMIRKANSDLRLYFDPMMMRIRRLDLIDLDESF 301 Query: 272 LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF--D 329 L + + HL + ++ ++ +P ++ ++ I L L + + Sbjct: 302 LYQEMKQHLSLLINRVIFRYRLTDLFYGEIEKKYPFSYQIASECIQALEAILQHKISKVE 361 Query: 330 SDLIGLYFACALERHQNE--RQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELV 387 + LY A + + + ++ + + +L + I E Sbjct: 362 ISYLTLYLELAFRYQKEHFSSKKVAIVHTTGKGTALMIQRQIKRILGRDIQITHVSEEQY 421 Query: 388 AIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSA 447 + + + + I + N+ + + + F + Sbjct: 422 EKVDLNKYFAVFTTIPLKNVNEETPVIHLTNLFDDSWLRAQWQKAKKKRL-----AGFHS 476 Query: 448 PGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCW 507 F+ +++Q +++ A L+ +++ + +RI+ RE + + A PH Sbjct: 477 TVFFYQIWKEKKTYQEYLKKLVAPLIRGYYVDEEFEKRILKREYQQSTFVNKEFAFPHTT 536 Query: 508 SEQERRFRGFFITLAQPVEVNNEVINHVLIACAAAD-----ARHELKIFSYLASILCQHP 562 ++ + + + + + +++ L ++ Sbjct: 537 NQLSQHIVLSVGLITDQGLAETGGNGVIFLFAIPEEMTAEVENELFELYDILFELIKMGI 596 Query: 563 AEIIAGLTGYEAFMELLH 580 E I E+F++L+ Sbjct: 597 DEFIELAPTQESFLKLIK 614 >UniRef50_C7TGA7 Transcriptional antiterminator, BglG family n=3 Tax=Lactobacillus rhamnosus RepID=C7TGA7_LACRL Length = 622 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 88/629 (13%), Positives = 199/629 (31%), Gaps = 64/629 (10%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 +NE+ +++D+L QQ T +L++ GV+ R+I + LN + + + S + GY Sbjct: 1 MNEKIKQLLDILLQQKDYLTALQLSEMLGVTERSIRNYVRTLNSS-ETQGPLIISSNKGY 59 Query: 60 QL--EIFERRSFFQLLQKHDND--DRLLALLLLN-TFTPRAQLASALNLPETWVAERLPR 114 ++ +++ +L + D + R+ +L+ + +F LA LN + ++ Sbjct: 60 RIQRDLYNESIENRLFAEDDAELLFRIAFILVSHVSFITFDDLAMQLNYSVESIRSKVQV 119 Query: 115 LKQRYER---TCCLASRPGLGHFIDETEEKRVILLANLL---------RKDPFLIPLAGI 162 L + L SR G I E ++ +LL L+ D L G+ Sbjct: 120 LFSKIHDMNLNVALESRIFTGIRILGAENQKRLLLEQLIPIGKIVKGDLTDSTFKLLNGV 179 Query: 163 TRDNL--QHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQ---- 216 + + + + + + I+ + E E+K Sbjct: 180 CDKQTIEKEIVSIDTVFSQHHTTMDFIVYAKIICHMVIAISRYRENHPINSSEVKDSNKD 239 Query: 217 -----------------IVEHSGLFLGDNA-VRTLTGLIEKQHQQAQVISADNVQGLLQR 258 I + + N + V+ ++ L+R Sbjct: 240 HPEFQLASSLLARAPTAISNKAEIMALTNYLIAMPLNTPGSFVPNMNVLQRGQLESSLKR 299 Query: 259 VPGIASLNI-IDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFIT 317 + + + I H++R L K + A+ ++ Sbjct: 300 AESYYGIPLYSNESYRNQIINHIMRLLDPIEESIPVFNPYSQKTKREYLFAYSIACFLYD 359 Query: 318 LLREQLDIPLFDSD--LIGLYFACAL-ERHQNERQPIILLSDQNAIATINQLAIERDVLN 374 L+ DI +S+ + ++ L E ++ + ++ + A + + I+ Sbjct: 360 ELQNDFDIQAPESEIAYLAIHIQLVLTEETKSTIRTELVFQGKKAEGELFRYKIQTYFPR 419 Query: 375 CRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLAT 434 + + + +L I + L+I D + I + + I +I++F+ T Sbjct: 420 IDIGVVTTAMDLADISK--YQLIIRCGFQESDDQVNDKIIEISKALNTNDIARIQNFIET 477 Query: 435 AFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGE 494 + + I L + RE Sbjct: 478 ----------VGTMSLIQKLDYHHMNESSSMDAIAYLLKKSGYFN--LFPYFKKRESMSS 525 Query: 495 NLIVNRLAIPHCWSEQERRFR-GFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSY 553 I + +A+PH + + + + + V+I AAD + F+ Sbjct: 526 TDIGHLVAMPHPFLKGSETAAKVIVGINKTAISWGRQKVRLVVIYIPAADLKTNKNFFND 585 Query: 554 LASILCQHPAEI-IAGLTGYEAFMELLHK 581 + + F+E+ ++ Sbjct: 586 VYEHTNNLAEVHALLETKTKREFIEVWNR 614 >UniRef50_A8AVC7 Phosphotransferase system mannitol/fructose-specific IIA domain, putative n=1 Tax=Streptococcus gordonii str. Challis RepID=A8AVC7_STRGC Length = 680 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 95/680 (13%), Positives = 210/680 (30%), Gaps = 103/680 (15%) Query: 2 LNERQLKIVDLL--EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAG- 58 + R ++ + +Q T +L++ VS RTIL DI+ +N L Sbjct: 1 MESRLSELFQRVCTTEQLTTIDDLSRLFKVSNRTILNDIEKVNGYLKQHDFPPIQVKNKR 60 Query: 59 --YQLEIF--------ERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 Y L+++ + L ++ LL +LL + L + Sbjct: 61 ISYPLKLYLTFSDLLVNKSELLLLDEEIRRKQLLLDMLLDMDHFSITAAIAKYGLSRNTI 120 Query: 109 AERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNL 167 + + ++ + L +G+ + E L+A+L I + L Sbjct: 121 IKEIKTIRAALSTQGIELIPISFVGYHLSGDEAVIRRLVASLFPVAKINIFASSEFVAQL 180 Query: 168 QHLS--TACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFL 225 + LS + + + L+ + ++ + + ++Q++ + Sbjct: 181 EELSQLLSVLLEKLNRRISQTAFERLLAYFWVSYSRFQQQHFMPKKETVEQLILEELILQ 240 Query: 226 GDNAVR----TLTGLIEKQHQQAQVISAD------------------NVQGLLQRVPGIA 263 T++ E A ++ V + V + Sbjct: 241 SIPLFHQLFATISHHPEDLKYLADRVAEASLLDPEERLSDDWLSWNVIVLDFINSVSKLT 300 Query: 264 --SLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLRE 321 S +D L E I HL + E + + + + + L + L Sbjct: 301 EESYFCVDTDLFEGILTHLRPATKRLLNGEELLNPLYDEVISHFKELHEAVLESLPALER 360 Query: 322 QLDIPLF--DSDLIGLYFACALERHQNERQP----IILLSDQNAIATINQLAIERDVLNC 375 +L + +S + L+F +L+R + +++ II+ ++ + + + ++R V Sbjct: 361 KLGVTFTLQESSFLTLFFESSLQRKRFQKRVLNDIIIVCNEGISTSQMLNSRLQR-VFAF 419 Query: 376 RVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATA 435 ++ S E +A ++ LII + +A I V ++ + IE+I+ + Sbjct: 420 NILGTFSKREALAWQQTHHADLIITTVD--IPEARFPTIKVNALLLSEDIERIQKISNQS 477 Query: 436 FIRQQPERFFSAPGSFHYS----------------------------------------- 454 + + + Sbjct: 478 LKEIHADEILTVIKRRIHLTKEQESAIFSDLTFLLQGTIFKQKQKKEEKKEPMLMEVLTQ 537 Query: 455 -----NVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIV--NRLAIPHCW 507 N + + R+ LV + ++ IV +A+PH Sbjct: 538 ATIEANYPAKDREDAVRECGRLLVQSGAARESYVEGMLENVQVNGTYIVIAPGIAMPHAR 597 Query: 508 SE-QERRFRGFFITLAQPVEVN---NEVINHVLIACAAADARHELKIFSYLASILCQHPA 563 E + +TL P++ + N+ + V+ CA D + LK S L L Sbjct: 598 PEKGAIKIGFSLLTLQDPIKFDHPTNDPVKLVIGLCAT-DHQTHLKALSELVETLSHQEI 656 Query: 564 E-IIAGLTGYEAFMELLHKG 582 + + ++ G Sbjct: 657 ITQLYSAKTSQEIYSIIKGG 676 >UniRef50_Q88S25 Sorbitol operon transcription regulator n=1 Tax=Lactobacillus plantarum RepID=Q88S25_LACPL Length = 618 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 78/596 (13%), Positives = 186/596 (31%), Gaps = 46/596 (7%) Query: 2 LNERQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 +N + L++++ T +L VS RT+ + I LN L G A+I Y Sbjct: 1 MNNQYLRLLNFFVVNDSVTMDDLVAFAHVSERTMCKYIQRLNDDLAGVAQIQEQRHR-YY 59 Query: 61 LEIFERRSFFQLL------------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWV 108 L++ + ++ + L LL + + LA L + +T + Sbjct: 60 LQVTDYSRLTKIQMGHLKKELDFNSTDKRDAYILKTLLECHDYVTLDSLAEQLMISKTTL 119 Query: 109 AERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVI-LLANLLRKDPFLIPLAGITRDN 166 L RL+++ + S G + + V ++ + + L L ++ Sbjct: 120 NRDLKRLREQLVTYHAEIKSMTNNGIKLVASRTYEVFAVIDHFIYDYFELSKLLSKKQEE 179 Query: 167 LQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIK----------- 215 L+ + S++ + + ++ + I Sbjct: 180 QLKLTLLNNGVDNETSRLILKNISVLKFAFPIGYRIEQPITNFSNYLIDDQPMDDIRSSV 239 Query: 216 ------QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIID 269 +I +F+ +T L+ ++ + Q+ + + + + Sbjct: 240 VACFSTEISMDELVFVLAPLAFKMTSLLSRKRMKEQIDNNRMLFLSMGNHSSH-QIPFDF 298 Query: 270 AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLF- 328 L E I HL + + Q N +P A+D++ + L LD + Sbjct: 299 EHLYEQIKYHLFFLINRTILHVPTAQLLPENQLTKYPLAYDLAHTILGFLETHLDFKITT 358 Query: 329 -DSDLIGLYFACALERHQNE-RQPIILLSDQNAIATINQLAIER--DVLNCRVIIARSLS 384 + + LY LE N + +++ + + ++ + +A + Sbjct: 359 AEFGYLVLYVEMELEDQDNIVNHKFEIAIVGQVGSSVIKFIRRQLVEMFQDDITVAVFDN 418 Query: 385 ELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERF 444 E ++ LLI ++ + D + + + Sbjct: 419 EWQLNQDNGRYLLIFSDQPIVYHDETTPVVRISAAFRTNELRGKLQVSLVEKAISNATCQ 478 Query: 445 FSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIP 504 F + + ++ H+ + R + RE G ++ +AIP Sbjct: 479 FDLWKF-----NHDTDYLTAVETMIDARISDGHVDSRFKSRWLEREQRGISVFEKGIAIP 533 Query: 505 H-CWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL-KIFSYLASIL 558 H + QP++ + + + + + EL ++ + + ++ Sbjct: 534 HVVNEKDTPEILLQVGVYDQPIKYLDRTVQMIFLIGTPNNLDQELGQVLTQIYDLV 589 >UniRef50_Q5WCM9 Transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCM9_BACSK Length = 686 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 79/679 (11%), Positives = 194/679 (28%), Gaps = 100/679 (14%) Query: 2 LNERQLKIVDLL-EQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ 60 LN R +I++ + + T +A++ G++ R I I+ +N L + + Sbjct: 3 LNGRSQQILNEIASNRRVTSATIAKKYGLTRRQISYAIEKINEWLQREHIPEIERTRQGH 62 Query: 61 LEIFER-------------RSFFQLLQKHDN-DDRLLALLLLNTFTPRAQLASALNLPET 106 + + + L + LL LL S L + Sbjct: 63 FIVDQSVFSKITGKQDCLHSNGQGFLTEEQRVHFILLMLLAKKEELSLLHFHSQLGYSKN 122 Query: 107 WVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLL---------RKDPFL 156 + L ++++ + G+ ++ E + LL +L R+ + Sbjct: 123 TILNDLKKVQEFVTPFQLVVRYSRKYGYLLEGKELQIRKLLIHLTEVVVQTQTGRRQLEI 182 Query: 157 IPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSL--ILAIYALRNQLTDEWPQYPGDE- 213 G + H Q + L ++ IL + R + P +P + Sbjct: 183 GTDIGKHEISEVHACIEKVEQKLGIQFTDEKLMAMPYILTLVLKRISIGHVLPPFPIEYD 242 Query: 214 ----------IKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADN--------VQGL 255 ++I H + L+ + ++A+ + + Sbjct: 243 ELSDTKEYQATEEIFRHLKDVPKQERLFVTLYLLTTSRYWTEWVNAEEELPDLMPALADV 302 Query: 256 LQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 L+ A + + + L++ + H+ + +++ L + + Sbjct: 303 LRLFEKSACIYLQERDLLLKKLIQHIKPAYYRMKYELTAVEAAKPILPDEYKELHHIVKR 362 Query: 315 FITLLREQLDIPLFDSD--LIGLYFACALERH----QNERQPIILLSDQNAIATINQLAI 368 + L QL + +++ + + + R + + I++ +++ + Sbjct: 363 SLGPLERQLGKRMPEAEKMYVTMLIGSWMMRQGESINKKIKAIVVCPQGVSVSGFMLKEL 422 Query: 369 ERDVLNCRVIIARSLSELVAIREEIEPLLIINNSH------------------------- 403 + + S+ E + + Sbjct: 423 SELFPEFVFLDSLSVREFQTCDLAFDLVFSQTPLETNKRLYMTSSLLRKEDRARLRRQVM 482 Query: 404 ------YLLDDAVNNYITV-------------KNIITAAGIEQIKHFLATAFIRQQPERF 444 ++ VN I + + + + + ++ Sbjct: 483 EDVYGYAPVEFNVNAVIEIVRNHALITDESGLQKQLQQYFFPNREERMPDGQAEEKQNLQ 542 Query: 445 FSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRII-AREGEGENLIVNRLAI 503 SW+ L+ Q I + ++ +E + +I +AI Sbjct: 543 SFIKPDSITFAPEAPSWEEALSLAAQPLLDQGKIEQRYVEALMSNKERDPYIIIGPYIAI 602 Query: 504 PHCWS-EQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASIL-CQH 561 PH E + L +PV ++ HV++ AA D ++ L + + Sbjct: 603 PHASPEEGAIEAGMSLLHLRKPVLFSDGEWVHVMVVIAAIDKHQHIRALRQLIKLAGSKE 662 Query: 562 PAEIIAGLTGYEAFMELLH 580 E + MEL+ Sbjct: 663 ARERLIAAKTETEIMELVS 681 >UniRef50_B0P1K3 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1K3_9CLOT Length = 694 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 84/658 (12%), Positives = 195/658 (29%), Gaps = 94/658 (14%) Query: 2 LNERQLKIVDLLE----QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA 57 L +RQ I+++L P T ++++ +S RT+LR++ +N Sbjct: 7 LTKRQKLIIEMLAAFNADDPITIQAISEKLKLSSRTVLREMPRINEWFEENDFKLVKKPR 66 Query: 58 ------------GYQLEIFERRSFFQLLQKHDNDDRLLA-LLLLNTFTPRAQLASALNLP 104 Y E+ + + K D +L LL +N S ++ Sbjct: 67 IGMYVDEDAETRNYIKELVDMDENKPVYSKADRQMIILLELLTINEPLKYFYFTSLFHIS 126 Query: 105 ETWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVIL-------------LANLL 150 + ++ L ++ + L RPG+G + + EE L L Sbjct: 127 DATLSNDLEEVETWLDHYNLTLYRRPGMGIYWEGKEEDYRQAVTMVLRQKLRGHSLKVLF 186 Query: 151 RKDPFLIPLA--GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQ 208 K+ L +T++ L N ++ S L++Y L Q Sbjct: 187 DKEKKLKERMFPNLTQEVLDDTRDIIKNMQGVLDIEYTDHSIRHLSLYLLITQNRVRTGH 246 Query: 209 YPGDE----------IKQIVEHSGLFLGDNAVRTLT------------------GLIEKQ 240 +E QI + G L + L+ E + Sbjct: 247 EIKEEKDVKSITHLPEYQIAKWLGGKLSNFERHQLSQGEVYNIAMQLLAAKIWKNKSENK 306 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIIDAQ-LVENITGHLLRCLAAPVWIAEHRQSSMN 299 + V ++ + + + + L++ + H+ + ++ Sbjct: 307 IDEESFKVRQLVMRIIAEMEILLEMEFFENAVLIDGLCNHMKPAINRMKQGVFTENQYID 366 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDI---PLFDSDLIGLYFACALERHQNERQPI---IL 353 L+ + + ++ L+E+L I P + I LYF A+E+ +++ + + + Sbjct: 367 FLEEKYSKVYVATIKACEFLKEELHIKKLPEGEMGFIALYFCVAVEQQKDKEEKLSVYVA 426 Query: 354 LSDQNAIATINQLAIERDVLNCRVIIARSL-SELVAIREEIEPLLIINNSHYLLDDAVNN 412 + + + ++++ V S E I++ + L Sbjct: 427 CPHGVGTSHMLAVHLKKEFPQLMVQKIISTAEIKEEELIEEGIDFIVSTAKLNLTFPNVY 486 Query: 413 YITVKNIITAAGIEQIKHFLATAFIRQQPERFFS----------------------APGS 450 ++ I + + + + Sbjct: 487 VNSILTETDKKMINAMIKNIDKKKRKNPIKTVKPVKRIGREDIEYMTLLGEEILQVLDNI 546 Query: 451 FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAI-PHCWSE 509 + ++ + + + + RE I + A+ HC ++ Sbjct: 547 KISTGENIKNKKQLIEYAGELFARNETTATEITFALNKRENIASTFIPSMNALFLHCETK 606 Query: 510 QERRFRGFFITLAQPVEVNNEVINHVLIACAAADA--RHELKIFSYLASILCQHPAEI 565 R R F+ L + + + I ++ + ++ S ++ L + I Sbjct: 607 GIRHCRFGFVYLNDEIIEDGKPIKGAILMLVPQGDGSKVYREVMSEISGALAEKDQII 664 >UniRef50_C5F6Y5 Predicted protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=C5F6Y5_LACPA Length = 693 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 101/672 (15%), Positives = 204/672 (30%), Gaps = 93/672 (13%) Query: 2 LNERQLKIVDLLEQQP-RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASG-SAGY 59 L +R L+I+ + + P G+L ++ G++ R + + +N L + G Sbjct: 15 LKKRNLQILSEIIRHPNLKSGDLEKKFGITRRQLAYALSQINEELVDHQLPKITRTPRGE 74 Query: 60 QLEIFERRSFFQLLQKHDN--------DDRLLA----LLLLNTFTPRAQLASALNLPETW 107 + E FF L + ++R+L LL+ + + + T Sbjct: 75 FVTSSEIAEFFNLQATEEPQPYVYREEEERILLICLYLLVSDELLSLVHIYDFSGVSRTT 134 Query: 108 VAERLPRLKQRYE-RTCCLASRPGLGHFIDETEEKRVILLANLLRKD-------PFLIPL 159 + L + R L G+FI+ +E LL L+ + + L Sbjct: 135 ASADLKAATRFLSTRQLKLKYTRQAGYFIEGSELAIRNLLNYLVTQLLKYDDGRSSMEQL 194 Query: 160 AGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDE-------WPQYPGD 212 + + + H +N + ++ + + L+ Q Sbjct: 195 GKLPTEQVIHFVREVENARNVTYSDESFSFLMLAVLMNVTRNLSHRVSDHHYFEHQISDT 254 Query: 213 EIKQIVE----HSGLFLGDNAVRTLTGLIEKQHQQAQVISAD-----NVQGLLQRVPGIA 263 E + + L +A + L+ + V AD +Q ++ + Sbjct: 255 EEFSALRPLMPKAWLTNDSDAEWLVILLLSANTIRGDVGVADADLVKAIQTMVAKFEQQT 314 Query: 264 SLNIIDA-QLVENITGHLLRCLAAPVWIAEHRQSSMNNLK---AAWPAAFDMSLHFITLL 319 + I D V+ + HL + + + + + D I L Sbjct: 315 FIKITDQDDFVKRLLAHLRPAIFRVRYGLHLHDIGIGQVMAADSRHRFLVDTINAIIEPL 374 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQ----NERQPIILLSDQNAIATINQLAIERDVL 373 + + + + LI YF LE+ ++ + ++ ++ ++ + + R Sbjct: 375 EKLTGKTIPEDERNLIAFYFDGELEKSADLHVSKERAAVVCTNGLIVSKLMIQNLRRLFP 434 Query: 374 NCRVIIARSLSELVAIREEIEPLLIINN-----------------SHYLLDDAVNNYITV 416 + A S E + + + L V N I V Sbjct: 435 EISFLSATSAREFEHFSGDYDLVFTTVPLKTSARQYIIHPLLSGDEQVQLRYRVLNDIGV 494 Query: 417 KNIITAAG------------------IEQIKHFLATAFIRQQPERFFSAPGSFH----YS 454 KNI T ++ FLA + + P F Sbjct: 495 KNIQTGISALTAIVRKHAKVTDAVGLDHALRRFLADQTVEELPVVDQPRLTDFTEPDLIQ 554 Query: 455 NVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEG--ENLIVNRLAIPHCWSEQ-E 511 +W+ +Q L ++T Q ++A + I ++AIPH E Sbjct: 555 VGSSRNWEQALQQAIRPLERLDYVTDPFRQTLMAETAAADNYSFIGTQVAIPHTVPENGV 614 Query: 512 RRFRGFFITLAQPVEV-NNEVINHVLIACAAADARHELKIFSYLASILCQHPAEI-IAGL 569 R F L QPV N I ++ D L+ L+ I+ + Sbjct: 615 LRNGFGFYILKQPVVYPNGFRIRMIVPIAVK-DTDQHLRAIQELSEIIADEATLKALFKA 673 Query: 570 TGYEAFMELLHK 581 + ++L + Sbjct: 674 ENGQQAYDILRR 685 >UniRef50_D0BN54 PRD domain-containing protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BN54_9LACT Length = 643 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 81/633 (12%), Positives = 193/633 (30%), Gaps = 55/633 (8%) Query: 2 LNERQLKIVDLLEQQ--PRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA-G 58 +N RQ+ +++ L Q+ P T LAQQ VS +TI DI +N L + + G Sbjct: 1 MNNRQMDLLNRLIQENEPVTGKVLAQQYLVSTKTIYNDISVINQYLKAFSSEIKKKPSMG 60 Query: 59 YQLEIFERRSFF--------QLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAE 110 +EI E+ Q K + + +LL+ +L + E+ + Sbjct: 61 IYIEIDEKYKEQLKKTFQTSQKTNKQNEECKLLSTFMLKNEVDILDCSIENFTSESTIRR 120 Query: 111 RLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLL-----------------RKD 153 + L++ + + +D E+ N L Sbjct: 121 EVHELEKEINKNGIKLIKHQGKISLDGLEDNIRKFFRNKLLSGLIHFNLAGLSNYGCINQ 180 Query: 154 PFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDE 213 + + I L+ + ++R L+ + + Q D P Sbjct: 181 NRVQEIIQIMNHLLEKYKFSVCYEYRHYLLMDLIIFDIRWKNGYFIEQQNDLDSNNPKII 240 Query: 214 IKQIVEH------------SGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPG 261 ++ + + G E + ++ V + V Sbjct: 241 ETYLLARDLLNEVSGKEVAEKEIISLSQSLITIGNYENTYLESNAQIEKTVDEFIALVGE 300 Query: 262 IASLNIIDAQLVEN-ITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR 320 +A ++ + + H+ + + M +K + ++ + + Sbjct: 301 LAGIHFEQDDYLRGMLINHIPAMIMRLRNKIHLKSDLMEEIKYQYGVLYNFVWLSGKVFK 360 Query: 321 EQLDIPLFDSD--LIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVI 378 ++ L D++ L+ ++ ++E+ + ++ A + + + + I Sbjct: 361 NNFNVELTDNEAALLTIHLEISVEKIKKPMNIYVICPHSLATSELLLNQVRKITGQFEHI 420 Query: 379 IARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITV----------KNIITAAGIEQI 428 S+ ++ L+I + + + T+ + + + + Sbjct: 421 HKVEYSKASSLDVRENDLVISSVELENISFPYIHVGTIMKEEDLLKIQRKFLASTMEQTQ 480 Query: 429 KHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA 488 +FL G Y + S +I ++ + + I Sbjct: 481 YNFLTKNDEEYTNHLIKKLLGKSIYIREKVSSVDKCLSKIIQLANEKNLENINFEKTIRH 540 Query: 489 REGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHEL 548 RE G +A+PH ++ +TL +P+ ++ V++ Sbjct: 541 RENLGITSTYTGIALPHANPKEVHTSELIMMTLDKPIYWGQNLVKVVMLIAITEKDLELY 600 Query: 549 K-IFSYLASILCQHP-AEIIAGLTGYEAFMELL 579 K + S + + + +E+F+ L Sbjct: 601 KDALKVIYSKIDSSSYIQNLWESENHESFITAL 633 >UniRef50_Q8NVE5 MW2083 protein n=56 Tax=Staphylococcus RepID=Q8NVE5_STAAW Length = 710 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 100/701 (14%), Positives = 205/701 (29%), Gaps = 127/701 (18%) Query: 1 MLNERQLKIVDLLEQ---QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSA 57 +L+ R+ +++ LL + Q T ++AQQ VS RTI R++ + L + + Sbjct: 2 LLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKGVEAYLTSFSLTLERANK 61 Query: 58 GYQLEIFERRSFFQLLQ------------KHDNDDRLLALLLLNTFTPRAQLASALNLPE 105 L Q + + AL+ + LA + + Sbjct: 62 KGLRIAGTDSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSV 121 Query: 106 TWVAERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITR 164 +A+ L L+ + L+ + G G ++ TE K+ L+ L+ + + + Sbjct: 122 QTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIE 181 Query: 165 D--------NLQHLSTACDNQHRWPLMQGDYLS----------------SLILAIYALRN 200 + + + + DYLS ++L+I ++N Sbjct: 182 NHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKN 241 Query: 201 Q----LTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIE----------------KQ 240 L D+ + + V E Sbjct: 242 GEYVALNDDIYDSVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAKRKNLND 301 Query: 241 HQQAQVISADNVQGLLQRVPGIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMN 299 + ++ + +V I+ + D LV+ +T HL + E + Sbjct: 302 TSLNNRCEENKIKAFVNKVEMISGMTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTD 361 Query: 300 NLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNE-RQPIILLSDQN 358 +K +P F+ + L P + I L+F +++ N +++ S Sbjct: 362 MIKFKYPRLFENVRLALNDCWPDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGM 421 Query: 359 AIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKN 418 + + +E+ I S+S+L ++ +I + + Y+TV Sbjct: 422 GTSRLLSTRLEQVFSEIERITQASVSDLKSLDLSQYDGIISTVNLDIDS----PYLTVNP 477 Query: 419 IITAAGIEQIKHFLATAFIRQQPERFFSAPGSF--------------------------H 452 ++ + I + FL T Q+ S Sbjct: 478 LLPDSDISYVAQFLNTKSTFQETHDKSSNMIDKDDVHVETKDIDGNTSFENEQTSYLTSV 537 Query: 453 YSNVRGESWQHITR-------------------------QICAQLVAQHHITA--DEAQR 485 + + I L I A+ Sbjct: 538 FEKHLSDEKSEQLMHHMRSGLTLLDSVKIVSTEVKQWQTYIADYLYQCDAINDPTSFAEL 597 Query: 486 IIAR--EGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQP-----VEVNNEVINHVLIA 538 + R + G L +AIPH + L +P ++ +N+ I +++ Sbjct: 598 LEQRLIDNPGWILSPYPVAIPHLRDNMIKHPMVLITVLEEPLILPSIQNDNQTIKYMISM 657 Query: 539 CAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELL 579 D + S L+ L I + + LL Sbjct: 658 FIP-DNDFMASLVSDLSEFLSLKLESIDTFMENPQELETLL 697 >UniRef50_P96574 Putative phosphotransferase enzyme IIA component n=6 Tax=Bacillus RepID=MTLR_BACSU Length = 694 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 83/646 (12%), Positives = 198/646 (30%), Gaps = 103/646 (15%) Query: 15 QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQ 74 + T ELA+ VS RTI R++ + + + +LL Sbjct: 18 NRYITVTELAELMQVSTRTIHRELKSIKPLMETVGLTLDKQPGKGLKAVGSPEGKQKLLT 77 Query: 75 KHDNDD-----------RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYER-T 122 + L +LL LA L + V+ L L++ Sbjct: 78 DLSYEQHEYSADERKLLILCSLLESQEPVKLYTLAHDLQVTNATVSYDLDELEKWISPFG 137 Query: 123 CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQ-------------- 168 L + G G + E + ++ NL+ + N++ Sbjct: 138 LTLIRKRGFGIQLIGPENAKRKIVGNLIVNRLDIQMFLEAVELNIKGKTDSSEKMFGVVS 197 Query: 169 --------HLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIK----- 215 + + + L Y++ ++ YA+ E +E++ Sbjct: 198 KGELLKMERILFQLKEKIAFSLSDSSYIALVVHLTYAIERIKLGETITMEQNELEELMNA 257 Query: 216 -----------QIVEHSGLFLGDNAVRTLTGLI---------EKQHQQAQVISADNVQGL 255 ++ G+ + + V +T + E + Q+ ++ +A + L Sbjct: 258 KEYSSALEIAGELERAFGVTIPEAEVGYITIHLRSANRKYKTEYKAQEIELETALQTKRL 317 Query: 256 LQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLH 314 + + +++ + L E + HL ++ E +K + + Sbjct: 318 IAFISDKIRMDLTKNYSLYEGLIAHLEPAVSRIKENIEIYNPMKEQIKRDYFLLYMAIEE 377 Query: 315 FITLLREQLDIPLFDSDLIGLYFACALE--RHQNERQPIILLSDQNAIATINQLAIERDV 372 + + + I L+F ALE + + + + +++ S + + +++++ Sbjct: 378 GVEKYFPGMSFSDDEIAFIVLHFGSALEIKKEEAKVKALVVCSSGIGSSKMLASRLKKEL 437 Query: 373 LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFL 432 SL EL + +++ + +YI V ++ Q+K ++ Sbjct: 438 PEIESFDMSSLIELKGKDVQAYDMIVST---VPIPYENIDYIMVSPLLNEEDANQVKQYI 494 Query: 433 ATAF----------------------------IRQQPERFFSAPGSFHYSNVRGE-SWQH 463 I + E F + ++ Sbjct: 495 KRKIPLILNKKRSSKEEAQQADVPDMLEAAESIGRYMEVIQDVLRHFTLAQLKTNPDHSM 554 Query: 464 ITRQICAQLVAQHHITADEAQRI--IAREGEGENLI-VNRLAIPHCWSEQERRFRGFFIT 520 + ++ QL I E + RE +G I +A+ H +++ Sbjct: 555 LLLELFQQLKKDGLIRDPEKAAVCLAEREKQGGLGIPGTNMALYHLKNDEIVLPFFKMFD 614 Query: 521 LAQPVEVNN------EVINHVLIACAAADARHELKIFSYLASILCQ 560 L+ P EV+ + +++ + + +I S ++S + + Sbjct: 615 LSTPYEVDGMDGNTLRMTRILVMMAPGSLSAEGSEILSAISSAIIE 660 >UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5P5_9FIRM Length = 720 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 94/714 (13%), Positives = 216/714 (30%), Gaps = 139/714 (19%) Query: 2 LNERQLKIVD--LLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 L R+L I+ +L + L + VS R I DID +N+ L G Sbjct: 3 LKRRELLILKSLMLADKGIRISYLTNKFKVSERMIRYDIDNINYFLKSINAFIDKDRNGN 62 Query: 60 QLEIFERRSFFQLLQKHDN--------------DDRLLALLLLNTFTPRAQLASALNLPE 105 + + +L ++ +N + ++ LL N + +A L + Sbjct: 63 FILNIKEEDIAKLKEEINNFAVTDVYLTEEDRFNYIIIKLLTANNPITISSIAEELYVSR 122 Query: 106 TWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPF--------- 155 + + + + ++ + + E+ + S+ G ++ +E K + L Sbjct: 123 SSLNKTMKKVYEWFDEQGIDVISKTNYGILLNCSENKWRKAVIKLSNNKEHRGYFYSLLH 182 Query: 156 -------------------LIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLS--SLILA 194 L A ++L + + + D S SL++ Sbjct: 183 KASNDSDDNYLNPTNYILPLYKEALFDEEDLYKIIDSISYLEDLLETKFDDSSYVSLLIH 242 Query: 195 IYALRNQLTDEWPQYPGDE-----------------IKQIVEHSGLFLGDNAVRTLTGLI 237 + +L DE K + + + D + +T + Sbjct: 243 LAIAMKRLKKGNKILMSDEQLEQLKNEDEYSVSKSFAKYLNTIFDIDIPDEEIGYITIHL 302 Query: 238 EKQHQQAQVISAD-----NVQGLLQRVPGIASLNIID---AQLVENITGHLLRCLAAPVW 289 + + + D V ++ V I + +I + L++++T HL ++ Sbjct: 303 MGARRFFILANDDKELREVVIKIIDNVQKILNKSIDNKYIDDLIKDLTVHLKPAISRLKN 362 Query: 290 IAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQL---DIPLFDSDLIGLYFACALERHQ- 345 + +K + F +++E+ +IP + I ++ +LE+ + Sbjct: 363 SLMIENPILGTIKGKYMDIFSAVEKSCFIIKEKYYIENIPDDEIAYITMHIGASLEKSRV 422 Query: 346 ---NERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNS 402 + + I + + + + I+R+ +I S+ + R+ +I ++ Sbjct: 423 IKSKKIKAITMCASGLGTSKMLSSRIQREFPMIEIIGEISIFDASRYRKA----DVIIST 478 Query: 403 HYLLDDAVNNYITVKNIITAAGIEQIKHFL------------------------------ 432 I V ++ I++I+ FL Sbjct: 479 IDTYIKTEIPIIRVTPLLDNKDIKKIEDFLDIKRVVPNYEILGDLDNKIDIIVKAAKDNS 538 Query: 433 ------------------ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVA 474 + S ++W+ R+ LV Sbjct: 539 TDLDEIKFKDDLYKILINNNNTGEEILPMLSELIDEKRISFYDAKNWEDAVREAGRLLVN 598 Query: 475 QHHITADEAQRIIA--REGEGENLIVNRLAIPHCWSE-QERRFRGFFITLAQPVEVNNE- 530 +++ +E +I +A+PH E + + L P+ N+ Sbjct: 599 TKCAKNGYVDKMVDTVKELGSYIVITKGIALPHARPEDGALKVAMSLVILNNPINFGNKN 658 Query: 531 --VINHVLIACAAADARHELKIFSYLASI-LCQHPAEIIAGLTGYEAFMELLHK 581 + V CA D L+ S L + + + L + + + + Sbjct: 659 NDPVKAVFGLCA-VDNHTHLRALSDLGKFAVNEDNFSTLVSLKSKKEISKYIKQ 711 >UniRef50_Q1JEW2 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=13 Tax=Streptococcus RepID=Q1JEW2_STRPD Length = 720 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 94/676 (13%), Positives = 201/676 (29%), Gaps = 97/676 (14%) Query: 1 MLNERQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFAS--GSA 57 ML+ ++ L + + + S R IL DI +N TL+ + Sbjct: 35 MLSHELIRNYQLFSKYKGHSLEAFESILKTSKRHILADIAKINDTLSLYQLPLIALDRQL 94 Query: 58 GYQLEIFERRSFFQLL--------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVA 109 Y ++ E+ ++L Q D ++ +++ F L S L L V Sbjct: 95 VYPPDLTEKDLLNRMLPTLDDYLFQDERLDMIIIYIMMAKEFISINHLESLLRLSRNSVI 154 Query: 110 ERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQ 168 L ++ R + LA G+F + LL + + + + L Sbjct: 155 ADLNLVRDRVQAFQVTLAYNRQDGYFFEGESLALRRLLESAVSSLLQVTSGPWVFSYLLH 214 Query: 169 HL-----------STACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQI 217 L + ++ + L LI L ++ + + + Sbjct: 215 ELGLPDQTKVMAATLEELSRENHLTFISEKLRDLIYFFCLLAHRPFSRDVRVEAVDTFPL 274 Query: 218 VEHSGLFLGDNAVRTLTGLIEKQ---------------HQQAQVISADNVQGLLQRVPGI 262 + + D + L E++ Q D ++ ++ V Sbjct: 275 ASPAVETMVDQLLVNFPSLTEEKYLVQSRLLGCIQGDLDLVFQQPIYDIMEEIINSVAVN 334 Query: 263 ASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLRE 321 L+I D +L +N+ HLL + + +K + + F + ++ L + Sbjct: 335 TGLSITDTPELRQNLYSHLLPAYYRLYYDIDLTNPLKEQIKQDYESLFYLVKRSLSPLEK 394 Query: 322 QLDIPLFDSD--LIGLYFACALE----RHQNERQPIILLSDQNAIATINQLAIERDVLNC 375 QL + + + ++F L+ R N+ + + + + + + + ++ Sbjct: 395 QLGKLVNEDEVAYFTIHFGRWLQAPKKRPSNQLVALSVCPNGISSSLMLEATLKELFPQL 454 Query: 376 RVIIARSLSELVAIREEIEPLLIIN--------------------NSHYLLDDAVNNYIT 415 + I L ++ + L+ + ++ Sbjct: 455 QFIRIHQLDKIKLLDPASFDLIFSTVAFDCAKPVYVTQALMGPVEKMMLKKMVCDDFHLP 514 Query: 416 VKNIITAAGIEQIKHFLATAFIRQQPERFFSAPG--------------------SFHYSN 455 + + I H T ++ S F Sbjct: 515 LSEQFALDDLLSIIHKHTTITNKEGLVSDLSRYLIGNHLTIEKGGLGLLDLLTADFIRQA 574 Query: 456 VRGESWQHITRQICAQLVAQHHITADEAQRIIA--REGEGENLIVNRLAIPHCWSE-QER 512 WQ R L+ I +I E ++ ++A+PH E R Sbjct: 575 DAVSDWQEAIRLAAQPLLEHQMIETSYIDGMIDSVNELGAYIVLAPKVAVPHAAPEKGTR 634 Query: 513 RFRGFFITLAQPVEVN-------NEVINHVLIACAAADARHELKIFSYLASILCQHP-AE 564 + + L +PV + ++ + + + A D+ LK L+ IL E Sbjct: 635 QLGMSLLQLKEPVSFDLKQEGDPDKQVQLIFVLSA-VDSSSHLKALQELSLILDDDEHIE 693 Query: 565 IIAGLTGYEAFMELLH 580 + E M L+ Sbjct: 694 QLIEAKNTEEIMSLIS 709 >UniRef50_Q5WJH1 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WJH1_BACSK Length = 689 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 89/680 (13%), Positives = 198/680 (29%), Gaps = 100/680 (14%) Query: 1 MLNERQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ML +R L I++L+ T +L +T ++ R I D+ +N L Sbjct: 3 MLQQRSLNILELIMGNHNITMKDLEVKTLLTRRQINYDLTRINDWLLQNKFKEIKKQGKE 62 Query: 60 QLEIFE----------RRSFFQLLQKHDNDDRLLALL-LLNTFTPRAQLASALNLPETWV 108 + + +L + + + L + L++ + Sbjct: 63 GFLFQNDTNEVLKALLKENVKYILNEDERLMAIYLYLYVSREEISLFHFTEMLDVSRGTI 122 Query: 109 AERLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRK--------DPFLIPL 159 + L +L + E L+ G+ I+ E + L+ K F + + Sbjct: 123 NDDLKKLANQLEDYSLKLSYSRLRGYHIEGEESTIKYVALLLITKLIDDNRSHYIFHLIM 182 Query: 160 AGITRDNLQHLSTACD---NQHRWPLMQGDYLSSLILAIYALRNQ-------LTDEWPQY 209 L++ C + D L +A + L L + + Sbjct: 183 EEQGLSLFNKLTSVCKTCFYKANIHFSDNDLLKVTYIATFILMRGRGIKEDFLQENNFVF 242 Query: 210 PGDEIK----QIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISAD------NVQGLLQRV 259 G +I++ G+ ++ + L+ + + + D ++ ++ ++ Sbjct: 243 EGHNEYAVAGEILDKLGMDHNEHIEFLTSLLLAFSIGDSYLNTPDYPMLKKIIEKIMIKL 302 Query: 260 PGIASLNIID-AQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITL 318 + + +++E + H ++ + +K + A F + + Sbjct: 303 EVSYGIQLNSKEEVLEQVYAHFRPAYYRIIFQYPIVNPLKDKIKKQYNALFKLLKDILEP 362 Query: 319 LREQLDIPLFDSD--LIGLYFACALE------RHQNERQPIILLSDQNAIATINQLAIER 370 L +I + D + + ++FA ++ + I+ + I+ + ++ Sbjct: 363 LNLPNNITVSDDEIAYLTIHFATLIDIDVTTVNSTKMIKAAIVCPNGTGISLLLYKELKN 422 Query: 371 DVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKH 430 + +S+L ++R++I+ + V + I + Sbjct: 423 IFPKVYFLKPIPISKLDSLRDDIDIIFSTKLIKATQPILVVSPIMNNLEKATLIKNFYRK 482 Query: 431 FLATAFIRQQPERFFSA------------------------------------------P 448 T Sbjct: 483 IGKTVVTENYYVEDLLKVIIKHAVVKRPSELKEELNNLILNYSYVDGIEGRQPMLSEIVT 542 Query: 449 GSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA--REGEGENLIVNRLAIPHC 506 NV W+ ++ LV H IT + +I E +I +A+PH Sbjct: 543 KELIQLNVEAVDWKDAIKKSATSLVNHHKITEGYVKAMIDSAEESGPYIVITKHVALPHA 602 Query: 507 WSE-QERRFRGFFITLAQPVEVN---NEVINHVLIACAAADARHELKIFSYLASILCQHP 562 E TL +PVE N+ + +V A D L S L +L H Sbjct: 603 RPEDGANELAISITTLKKPVEFGNSENDPVKYVFCLSA-LDNITHLNALSELVGLLGDHA 661 Query: 563 A-EIIAGLTGYEAFMELLHK 581 E + + + K Sbjct: 662 FYETLEKAKEPSEIINFIEK 681 >UniRef50_C7HSJ2 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSJ2_9FIRM Length = 630 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 92/630 (14%), Positives = 216/630 (34%), Gaps = 59/630 (9%) Query: 2 LNERQLKIVDLLEQQP--RTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 + RQ KI+ +L + T E+A+ VS RT+L +++ +N L+ R+ + G Sbjct: 3 ITNRQKKIIGILLESKDTITCQEIAEIINVSDRTVLNEVNSINKKLSDGNRLTVAKGKGI 62 Query: 60 QLEIFERRSFFQLLQKHDNDDRLL-----ALLLLNTFTPRA----QLASALNLPETWVAE 110 +L L ++++ +L LL+N + + L + + + + Sbjct: 63 KLNRNTTIYELHKLYNSEDENEILIKRFINTLLINNYFKQKKYSIDFIEELYISQNTLKK 122 Query: 111 RLPRLKQRYERT-CCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIP--LAGITRDNL 167 + ++ +R L G FI E + ++N+L L I N+ Sbjct: 123 LIRDTREVLKRYQIDLIVNNKEGIFIKGRENNIRLCMSNILFSSSSDYEYFLDSINLFNI 182 Query: 168 QHLSTACDNQHRWPLMQGDYLS-------SLILAIYALRNQLTDEW-------------P 207 + + + L+ + + I +RNQ + Sbjct: 183 KEIDEIKRLTLKILNKYDLSLTGVAFNSFVIHILISIIRNQNEINYDKDLLKTMDKSVEK 242 Query: 208 QYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQ-------QAQVISADNVQGLLQRVP 260 + +K I E L + LI Q +A ++ R+ Sbjct: 243 DIVRELMKTIKEKLNYDLSSDYYYLTKHLITSQKFSKDDDKLEADEFVNIIYNNIINRIK 302 Query: 261 GIASLNIIDAQLVEN-ITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLL 319 S++ + +++ + HL + + + ++ +K+ +P A+DM + + Sbjct: 303 RDFSIDFSNDEILTGSLKIHLTTSINRYMLNSSINHIDLSEIKSQYPIAYDMGIVAAEEI 362 Query: 320 REQLDIPLFDSD--LIGLYFACALERHQNERQ-----PIILLSDQNAIATINQLAIERDV 372 + + D++ + L+ A R N+ + +I+ + A + ++ Sbjct: 363 HSVIKRDIDDTEILFLALHLGTAFNRVNNDGKESGSNILIVCGAGLSTARFLKYSLLEKF 422 Query: 373 -LNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHF 431 + I S S+ + L++ + ++ + + + N I ++ + Sbjct: 423 DKEIKNIDIISSSQYKDDMFDNYDLVLSSINNLINIEGSIKVNYILNNIEVNIVKNKLRY 482 Query: 432 LATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREG 491 + SF ES + + + L ++ + + + I RE Sbjct: 483 AKNLEHLKVFNNELFYKKSF-------ESKKEVLDYLTTDLSNKNILNKKQIESIYDREK 535 Query: 492 EGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIF 551 G + NR+AIPH S + + + + ++ +NE + V++ D + + Sbjct: 536 MGNTCLGNRIAIPHPLSYTAKEMKISVLINDKAIDWDNEEVFVVMLLLIPKDKIKDWDVL 595 Query: 552 SY--LASILCQHPAEIIAGLTGYEAFMELL 579 + + + F E+ Sbjct: 596 FKKMFKVFSSRKNVDKLINSNTLNEFKEVF 625 >UniRef50_C2BFG8 Transcriptional antiterminator n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFG8_9FIRM Length = 596 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 95/606 (15%), Positives = 213/606 (35%), Gaps = 38/606 (6%) Query: 1 MLNERQLKIVDLLEQ-QPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY 59 ML +R+++I+D+L + +L+ + VS RTILRD+ ++ L S GY Sbjct: 1 MLGDREIEILDVLINAEDVKSNDLSTKFNVSNRTILRDLRKISNFLEKYGDKINSSKDGY 60 Query: 60 QLEIFERRSFFQLL------QKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLP 113 +L ++ ++ Q +D +L ++ + + LA L E+ + ++L Sbjct: 61 KLISTDKNKLKSIIRIIKLKQYNDIYKQLFLFIVEHDNIKVSDLALKFYLSESSIKQKLN 120 Query: 114 RLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRK------DPFLIPLAGI-TRDN 166 LK++ ++ +ID E+ L + L+ L+GI + D Sbjct: 121 MLKKKIDKYNIKLLMVSGKIYIDGLEKDIRNYLVDNYMVVKNNILYHTLLELSGIPSIDI 180 Query: 167 LQHLSTACDNQHRWPLMQGDY--LSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLF 224 ++ L + + DY L SLIL Y Y I I + + Sbjct: 181 IKKLISKELIDRSITISDYDYSKLISLILVSYYRAEYSIYLSQSYINPIILDINKKLAIE 240 Query: 225 LGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIA--------SLNIIDAQLVENI 276 + I + + + D + + V ++ D + ++ I Sbjct: 241 HKIQLSKKDCAYITENSIFNKYMYDDLDYKINKIVDEALSKICKTSSNIYSFDDEFIKAI 300 Query: 277 TGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSD--LIG 334 HL + + + +N +K + + ++ ++ E +I + + + + Sbjct: 301 NFHLKILIHRMELNDKIKNPLVNEIKRKFILEMNDAMIIKDMIYEHFNIQIDEDEVSYLA 360 Query: 335 LYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIE 394 +Y + ++++ II+ + ++ I ++ IE+ N +I LS L + Sbjct: 361 IYLMSSKISSKDKKNVIIICNFGIGVSQIVKMKIEQQYKNLNIIGVYPLSNLDLAISKNP 420 Query: 395 PLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYS 454 +I + + + K I + + + + + A ++ Sbjct: 421 DYIISTVNIDVDTKGIPVVDGTKVIYSNEPLVFAERSIKDILNKNLFFDIDVASKEEFFN 480 Query: 455 NVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRF 514 S + I + + + + + I N +AIPH E + + Sbjct: 481 ----VSQKLILKNNSEMTDKKLDVVENYDYSV-------STDIGNLVAIPHAVLEGDFKS 529 Query: 515 RGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPA-EIIAGLTGYE 573 L + N E + V + + + YL + + + + Y+ Sbjct: 530 FVAIFRLKNQIIWNKENVKFVFLIVINKKEKFYIDELKYLYNYILDPSNLSFMINASNYD 589 Query: 574 AFMELL 579 F+E + Sbjct: 590 EFVERI 595 >UniRef50_C0CV60 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CV60_9CLOT Length = 699 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 100/698 (14%), Positives = 207/698 (29%), Gaps = 123/698 (17%) Query: 2 LNERQLKIVDLLE-QQPRTPGELAQQTGVSGRTILRDIDYLNFTLN----------GKAR 50 +N RQ + +L ++A+ ++ RT+ DI LN L Sbjct: 1 MNIRQKYELKMLAVDGYVNMTKVAEMFSINLRTVRYDIGILNEFLLRELGRECIFVTNKT 60 Query: 51 IFASGSAGYQL----EIFERRSFFQLLQKHDNDDRLLALLL-LNTFTPRAQLASALNLPE 105 G+ QL E+ + + L + ++ L N ++ +A + Sbjct: 61 AQVDGNVKEQLAGLAEVGVKDFYTDRLTGEERMLLIVFDLCWSNGYSTIQDIADKYFVSR 120 Query: 106 TWVAERLPRLKQRY-ERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFL-------- 156 T V + +K+ + L S+ G G ID E R L+ ++R L Sbjct: 121 TTVNADMVAVKEYCRKNGINLISQRGKGLCIDADEVGRRKYLSKVIRDFTALTGDRTDCD 180 Query: 157 --IPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSS----LILAIYALRNQLTDEW---- 206 I D L + + D ++ + +A+ R +L +E+ Sbjct: 181 RSIYAQWFEEDGLNKIKAIVTDVEEAFATYLDDIAYEALVIHIALSIKRFRLDEEYGEPK 240 Query: 207 -----------PQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQA-------QVIS 248 Q + ++++ E + L D + + + + V+ Sbjct: 241 AADRIERDSLQYQMALEIVRRVNECFRIRLPDAEISYVAVHMGAKSSAITKQEASGDVLL 300 Query: 249 ADNVQGLLQRVPGIASLNII-DAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPA 307 L+ V ++ D +L E + H+ C + L +P Sbjct: 301 EFYCIKLIAGVSKRIGYDLTSDDRLYEFLIQHISACTYRTKNGMLLENPLKDELIHNYPE 360 Query: 308 AFDMSLHFITLL--REQLDIPLFDSDLIGLYFACALERHQNE----RQPIILLSDQNAIA 361 + + + + I L+FA A+ R + +++ + A Sbjct: 361 LYGAIKDTFPAVGGLNLIVPTDDEIAYILLHFAAAINRRKQNAERLVNVVVVCATGIGTA 420 Query: 362 TINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIIT 421 + + R+ + + +L ++ + LII ++ V ++ Sbjct: 421 ELVVTGLNRNFK-LNIRGTVARHQLEKFLKKEDVDLIITTVPLQTRKT---FVKVSPLLK 476 Query: 422 AAGIEQIKHFL------------------------------------------------- 432 I ++ L Sbjct: 477 RDDIVRVSKQLLDMGFNIERSVTAREGESATAKRLRELLERYAAKEDEEILLGEIGRLLQ 536 Query: 433 --ATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIA-- 488 + + + V +W+ R+ LV IT + Q +I Sbjct: 537 DKNNNRVEGKYMLSELINETSIRLGVECGTWEDAVRESGKILVENGDITEEYIQAVIDNV 596 Query: 489 REGEGENLIVNRLAIPHCWSE-QERRFRGFFITLAQPVEVN---NEVINHVLIACAAADA 544 E +I +A+PH ++ R FI+L PV N+ + +V + DA Sbjct: 597 NEVGPYIVITKGVALPHATNKIGVNRTAMSFISLKTPVNFGSKANDPVKYVFMLAT-IDA 655 Query: 545 RHELKIFSYLASIL-CQHPAEIIAGLTGYEAFMELLHK 581 L LA L + E + + + + + Sbjct: 656 NSHLGALQDLAEFLGRKEFIETLGAARDAGSIVSYIKE 693 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.137 0.333 Lambda K H 0.267 0.0419 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,326,427,023 Number of Sequences: 3077464 Number of extensions: 84859442 Number of successful extensions: 403754 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1873 Number of HSP's successfully gapped in prelim test: 9815 Number of HSP's that attempted gapping in prelim test: 383727 Number of HSP's gapped (non-prelim): 22430 length of query: 582 length of database: 1,040,396,356 effective HSP length: 134 effective length of query: 448 effective length of database: 628,016,180 effective search space: 281351248640 effective search space used: 281351248640 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 96 (41.6 bits)