120 c1ni4D_ Probab=96.01   E-value=0.11  Score=29.23  Aligned_columns=238  Identities=11%

Q ss_pred             HHHHHHHHHHCCCCEEEEC---CCCCHHHHHHHHHHC--CCEEEECC-CHHHHHHHHHHHHHHHCCEEEEEECCCHHHHH
Q ss_conf             9999999998699899984---897328999999867--98899919-86899999999998628839999838337888
Q batch____        11 MHIIVEALKQNNIDTIYGV---VGIPVTDMARHAQAE--GIRYIGFR-HEQSAGYAAAASGFLTQKPGICLTVSAPGFLN   84 (564)
Q Consensus        11 ~~~l~~~L~~~GV~~vfg~---pG~~~~~l~~~l~~~--~i~~i~~~-~E~~A~~~A~G~ar~tg~~~vv~~t~Gpg~~n   84 (564)
                      .++|.+.+++.-=-.+++-   .++....+.+.+.+.  +-|++.+- .|+++..+|.|+|.. |.-.++.+....-+.-
T Consensus        11 ~~al~~~~~~d~~v~~~~~D~~~~~g~~~~t~~l~~~~~p~R~~d~gIaEq~~vg~AaGlA~~-G~~pvv~~~~~~f~~r   89 (330)
T c1ni4D_          11 NQGXDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEXGFAGIAVGAAXA-GLRPICEFXTFNFSXQ   89 (330)
T ss_dssp             HHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHT-TCEEEEECSSGGGGGG
T ss_pred             HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCC-CCEEEEEEECHHHHHH
T ss_conf             999999986379699997520467840000066898738450898786579999998765238-9877999410455444


Q ss_pred             HHHHHHHHHH---------CCCCEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHH-CEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             8999998876---------089889997689846621688864311178787723-102653598999999999999999
Q batch____        85 GLTALANATV---------NGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPY-AKAAFRVNQPQDLGIALARAIRVS  154 (564)
Q Consensus        85 ~l~~l~~A~~---------~~~Pli~i~g~~~~~~~~~~~~~~q~~dq~~l~~~~-~k~~~~v~~~~~~~~~l~~A~~~a  154 (564)
                      ++--+...-.         ..+|+++..+...    ..+-+.+|......+++.+ --..+.+.++.++...++.|++  
T Consensus        90 a~dqi~~~~a~~~~~~~~~~~~~v~~~~~~~~----~~~g~~~h~~~~~a~l~~iPnl~V~~Psd~~e~~~~l~~a~~--  163 (330)
T c1ni4D_          90 AIDQVINSAAKTYYXSGGLQPVPIVFRGPNGA----SAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIR--  163 (330)
T ss_dssp             THHHHHHTTTTHHHHTTSSCCCCCEEEEECSC----CSSCCGGGCCCCHHHHHTSTTCEEECCCSHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC----CCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH--
T ss_conf             68999999752332123568735999787666----899867442106889832899599843998999999999984--


Q ss_pred             HCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH-------------HHHHHHHHHHHHCCCEEEEECCC
Q ss_conf             61899739998134253164781112345555556665568998-------------99999999997279829998898
Q batch____       155 VSGRPGGVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCP-------------KSVTSAISLLAKAERPLIILGKG  221 (564)
Q Consensus       155 ~~~~~GPV~l~ip~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~i~~~~~~l~~ak~pvii~G~~  221 (564)
                         ..||+|+..|+..+......+............-......+             ...-++++.|.+..--+-++.-.
T Consensus       164 ---~~~P~~ir~~k~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~G~dvtiva~G~~v~~al~Aa~~L~~~gi~~~Vid~~  240 (330)
T c1ni4D_         164 ---DNNPVVVLENELXYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINXR  240 (330)
T ss_dssp             ---SSSCEEEEECTTTTTCEEEECHHHHSTTCCCCTTCCEEEECCSSEEEEECSTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             ---CCCCEEEEECHHHCCCCCCCCCCCCCCCCCEECCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             ---69978999322222656677864566884020276217525994899951389999999999998639938999630


Q ss_pred             CCCHHHHHHHHHHHHHHCCEEEECHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf             6777899999999998389297252107435588841245887888
Q batch____       222 AAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFA  267 (564)
Q Consensus       222 ~~~~~a~~~l~~lae~~~~pv~~t~~~~g~~~~~~~~~~g~~~~~~  267 (564)
                      ...+-..+.+.+++.+.+-.++.         ++|....|....-+
T Consensus       241 ~i~P~D~~~l~~~~~~~~~vvvv---------eE~~~~gG~g~~v~  277 (330)
T c1ni4D_         241 TIRPXDXETIEASVXKTNHLVTV---------EGGWPQFGVGAEIC  277 (330)
T ss_dssp             EEETCCHHHHHHHHHHHSCEEEE---------CSSCSTTSHHHHHH
T ss_pred             CCCCCCHHHHHHHHHCCCCEEEE---------ECCCCCCCHHHHHH
T ss_conf             23778989999984038958999---------63985687279999