Job Description Q46858 Confidence 32.89% Date Thu Jan 5 12:35:18 GMT 2012 Rank 31 Aligned Residues 65 % Identity 14% Template d1twfc2 SCOP info Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit Resolution 2.30

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.														.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Q	I	E	R	Q	F	I	Y	D	N	P	I	C	F	G	E	E	S	L	F	S	R	V	D	E	I	R	V	L	E	K	T	A	D	S	A	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	R	F	T	L	T	N	G	N	N	E	E	Q	E	L	V	L	Q	R	R	E	G	K	W	E
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	I	D	S	V	E	V	E	T	N	T	T	V	L	A	D	E	F	I	A	H	R	L	G	L	I	P	L	Q	S	M	D	I	E	Q	L	E	Y	S	R	D	C	F	C	E	D	H	C	D	K	C	S	V	V	L	T	L	Q	A	F	G	E	S	E	S	T	T	N	V	Y	S	K	D	L	V	I	V
Template Known Secondary structure														S	S	S											T	S					T	T	G	G	G	S			T	T	T	S	S	S	S	S			T	T	T												S	S	S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions