224 d1vr6a1 Probab=95.83   E-value=0.11  Score=28.17  Aligned_columns=209  Identities=22%

Q ss_pred             CCCCCCCCEEEECCEECCC--CEEECC-----CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf             7888986458976575189--548678-----998878999999967997899512683312458998299981678538
Q batch____        38 VRQKVPAKPVNCMGLTFKN--PLGLAA-----GLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLI  110 (336)
Q Consensus        38 ~~~~~~~L~t~~~G~~~~~--Pigiaa-----g~~~~~~~~~~~~~~G~g~v~~~tvt~~~~~g~~~pr~~~l~~~~~~~  110 (336)
                      +....-+..+++-|.++-.  |+.|++     ..+.-.+.++.+.+.|.                   ++.+.+..+...
T Consensus        74 r~~~~~~t~i~v~~~~iG~~~~~~IaGPCsies~e~~~~~A~~l~~~g~-------------------~~~r~~~~KpRT  134 (338)
T d1vr6a1          74 REFHPEDTVIDLGDVKIGNGYFTIIAGPCSVEGREMLMETAHFLSELGV-------------------KVLRGGAYKPRT  134 (338)
T ss_dssp             TTTCCSCCCEECSSCEESTTEEEEEEECSBCCCHHHHHHHHHHHHHTTC-------------------CEEECBSCCCCC
T ss_pred             HHCCCCCCEEEECCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCC-------------------CEEEEEEECCCC
T ss_conf             3104688789989999779756999981357998999999999986134-------------------355713525778


Q ss_pred             EEECCCCHHHH--HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCCCCCCCCCCHH
Q ss_conf             85168866699--9999999648980699960788889678889999998876441233401101174566554446767
Q batch____       111 NRMGFNNLGVD--NLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGE  188 (336)
Q Consensus       111 ~s~gl~~~g~~--~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~~~ad~i~lN~~cp~~~~~~~~~~~~  188 (336)
                      ..++|...|.+  .+++++++. +..++++-+.-...             ++.+.+.+|.+-+        +.+..++-.
T Consensus       135 s~~~f~G~g~~gl~~L~e~~~~-~Glpv~tev~d~~~-------------~~~v~~~vd~lqI--------GAr~~~n~~  192 (338)
T d1vr6a1         135 SPYSFQGLGEKGLEYLREAADK-YGMYVVTEALGEDD-------------LPKVAEYADIIQI--------GARNAQNFR  192 (338)
T ss_dssp             STTSCCCCTHHHHHHHHHHHHH-HTCEEEEECSSGGG-------------HHHHHHHCSEEEE--------CGGGTTCHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHH-HCCEEEEECCCHHH-------------HHHHHHHHHHHHC--------CCCCCCCHH
T ss_conf             8763367727889999999987-08908963069877-------------8888863214211--------733445999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             89999999999998765404789828999438999777999999999679979999348556432233345566664155
Q batch____       189 ALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSG  268 (336)
Q Consensus       189 ~l~~~~~~~~~~~~~~~~~~~~~~Pv~vKl~~~~~~~~~~~~a~~~~~~Gvdgi~v~n~~~~~~~~~~~~~~~~~gg~sG  268 (336)
                      .+...              ..+..||++|-....+..+....+..+...|-.-+.+.-++...              ..+
T Consensus       193 lL~~~--------------a~~gkPV~lk~G~~~ti~e~~~Ave~i~~~GN~~v~L~~RG~~t--------------~~~  244 (338)
T d1vr6a1         193 LLSKA--------------GSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRT--------------FEK  244 (338)
T ss_dssp             HHHHH--------------HTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCC--------------SCC
T ss_pred             HHHHH--------------HCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC--------------CCC
T ss_conf             99986--------------31798299958988999999999999996799849999506557--------------999


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCEEEE----ECCCCC--HHHHHHHHHCCCCEEEE
Q ss_conf             00146899999999985189965999----898899--99999999739989998
Q batch____       269 RPLQLKSTEIIRRLSLELNGRLPIIG----VGGIDS--VIAAREKIAAGASLVQI  317 (336)
Q Consensus       269 ~~~~~~al~~i~~i~~~~~~~ipIi~----~GGI~~--g~Dv~k~l~~GAd~V~i  317 (336)
                      .+....-+..+..+++..  .+|||.    .-|-++  ..-+..++++||+++++
T Consensus       245 ~~~~~~dl~~i~~lk~~~--~~PVi~D~sHg~s~~~~~~~~~~AAvA~Ga~G~iI  297 (338)
T d1vr6a1         245 ATRNTLDISAVPIIRKES--HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIV  297 (338)
T ss_dssp             SSSSBCCTTHHHHHHHHB--SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEE
T ss_pred             CCCCCCCHHHHHHHHHCC--CCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf             981013877899998316--99889962556787302468989999708987999