277 c3sqsA_ Probab=88.19   E-value=1.7  Score=21.67  Aligned_columns=123  Identities=15%

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             46767899999999999987654047898289994389997779999999996799799993485564322333455666
Q batch____       184 LQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQT  263 (336)
Q Consensus       184 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Pv~vKl~~~~~~~~~~~~a~~~~~~Gvdgi~v~n~~~~~~~~~~~~~~~~~  263 (336)
                      ...+......+....+.....+.....+..+.+--....+-.+..+.++.+.+.++..+-                    
T Consensus       177 G~~~~~~~~~~~~d~~~i~air~~~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--------------------  236 (386)
T c3sqsA_         177 GYGPKDGPAGMRENLKRVEALREVLGYDVDLMLECYMGWNLDYTKRMLPKLERFEPRWLE--------------------  236 (386)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE--------------------
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEE--------------------
T ss_conf             567865436989999999999997599978999558888999999999985445626996--------------------


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEECHHHHHCCHHHHHHHHH
Q ss_conf             641550014689999999998518996599989889999999999739-98999855888268017999884
Q batch____       264 GGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAG-ASLVQIYSGFIFKGPPLIKEIVT  334 (336)
Q Consensus       264 gg~sG~~~~~~al~~i~~i~~~~~~~ipIi~~GGI~~g~Dv~k~l~~G-Ad~V~i~t~~~~~gp~~~~~i~~  334 (336)
                           .|+.+..++..+++++.+  .+||.++-.+.+..|+.+++..| +|.+|+--.. .+|..-..+|.+
T Consensus       237 -----eP~~~~d~~~~~~l~~~~--~ipIa~dEs~~~~~~~~~~i~~~~~d~i~~d~~~-~GGit~~~~i~~  300 (386)
T c3sqsA_         237 -----EPVIADDVAGYAELNAMG--IVPISGGEHEFSVMGCAELINRKAVSVLQYDTNR-VGGITAAQKINA  300 (386)
T ss_dssp             -----CCSCTTCHHHHHHHHHTC--SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHH-HTCHHHHHHHHH
T ss_pred             -----CCCCCCCHHHHHHHHHHC--CCEEEECCCCCCHHHHHHHHHCCCCCEEEECCCC-CCCHHHHHHHHH
T ss_conf             -----357806989999999862--9909808764889999999973899699504042-486799999999