30 c1vrdA_ Probab=99.95   E-value=1.2e-25  Score=162.31  Aligned_columns=228  Identities=21%

Q ss_pred             HHHHHCCCCHHCCCCCCCCCEEEECCE-ECCCCEEECC-CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEE
Q ss_conf             987315873100788898645897657-5189548678-99887899999996799789951268331245899829998
Q batch____        26 LRRITGTPFEALVRQKVPAKPVNCMGL-TFKNPLGLAA-GLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRL  103 (336)
Q Consensus        26 ~~~~~~~P~~~l~~~~~~~L~t~~~G~-~~~~Pigiaa-g~~~~~~~~~~~~~~G~g~v~~~tvt~~~~~g~~~pr~~~l  103 (336)
                      |+.+.++|-+.+++++++|++|+|++. ++++||++|+ ....+.+.++++++.|.-.+..++.+..+..          
T Consensus         7 fddv~l~P~~~~~~~~~vd~st~~~~~~~l~~Pi~~apM~g~s~~~la~a~a~~g~~g~i~~~~~~~~~~----------   76 (321)
T c1vrdA_           7 FDDVLLVPQYSEVLPKDVKIDTRLTRQIRINIPLVSAAMDTVTEAALAKALAREGGIGIIHKNLTPDEQA----------   76 (321)
T ss_dssp             GGGEEECCCCCCCCGGGSCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHTTTCEEEECSSSCHHHHH----------
T ss_pred             HHHEEEECCCCCCCHHHCCCEEEECCCCEECCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHH----------
T ss_conf             5652450787788844470248971586103345854876888989999999889717732679989999----------


Q ss_pred             ECCCCEEEEECCCCHHHHHHHHHHHHCCCC--------------EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf             167853885168866699999999964898--------------069996078888967888999999887644123340
Q batch____       104 VDAEGLINRMGFNNLGVDNLVENVKKAHYD--------------GVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYI  169 (336)
Q Consensus       104 ~~~~~~~~s~gl~~~g~~~~~~~~~~~~~~--------------~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~~~ad~i  169 (336)
                                        ..++..++....              ..+.+++.....        +...........++.+
T Consensus        77 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~  130 (321)
T c1vrdA_          77 ------------------RQVSIVKKTIMSVIEHPNAARDEKGRLLVGAAVGTSPE--------TMERVEKLVKAGVDVI  130 (321)
T ss_dssp             ------------------HHHHHHHTCCHHHHTCTTCCBCTTSCBCCEEEECSSTT--------HHHHHHHHHHTTCSEE
T ss_pred             ------------------HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHH--------HHHHHHHHHHCCCCEE
T ss_conf             ------------------99998897667655320125534452021142678975--------8999999973499848


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             11011745665544467678999999999999876540478982899943899977799999999967997999934855
Q batch____       170 AINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTL  249 (336)
Q Consensus       170 ~lN~~cp~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Pv~vKl~~~~~~~~~~~~a~~~~~~Gvdgi~v~n~~~  249 (336)
                      .+|.++.         .+....+.+.+++....        .+|+++|      ...+.++|+.+.++|+|+|+++|+++
T Consensus       131 ~i~~~~~---------~~~~~~~~i~~l~~~~~--------~~pvivk------~v~s~~~A~~a~~~Gad~I~v~g~gG  187 (321)
T c1vrdA_         131 VIDTAHG---------HSRRVIETLEMIKADYP--------DLPVVAG------NVATPEGTEALIKAGADAVKVGVGPG  187 (321)
T ss_dssp             EECCSCC---------SSHHHHHHHHHHHHHCT--------TSCEEEE------EECSHHHHHHHHHTTCSEEEECSSCS
T ss_pred             EECCCCC---------CCHHHHHHHHHHHHHCC--------CEEEEEC------CCCCHHHHHHHHHCCCCEEEEECCCC
T ss_conf             9717888---------82026889999997189--------1069975------77999999999976998999807788


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHH
Q ss_conf             6432233345566664155001468999999999851-8996599989889999999999739989998558882
Q batch____       250 DRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL-NGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF  323 (336)
Q Consensus       250 ~~~~~~~~~~~~~~gg~sG~~~~~~al~~i~~i~~~~-~~~ipIi~~GGI~~g~Dv~k~l~~GAd~V~i~t~~~~  323 (336)
                      +.............           .+..+..+++.. ..++|||++|||++|.|+.|+|++|||+|++||+|++
T Consensus       188 ~~~~~~~~~~~g~p-----------~~~~l~~v~~~~~~~~ipIia~GGI~~g~dv~kaLalGAdaV~iG~~fl~  251 (321)
T c1vrdA_         188 SICTTRVVAGVGVP-----------QLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAG  251 (321)
T ss_dssp             TTCHHHHHHCCCCC-----------HHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred             CCCCCCCCCCCCCC-----------HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHH
T ss_conf             76665433565677-----------38999999998301895899967868999999999738887676818762