457 c1vliA_ Probab=27.98   E-value=39  Score=13.97  Aligned_columns=99  Identities=11%

Q ss_pred             HHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             87654047898289994389997779999999996799799993485564322333455666641550014689999999
Q batch____       202 NDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRR  281 (336)
Q Consensus       202 ~~~~~~~~~~~Pv~vKl~~~~~~~~~~~~a~~~~~~Gvdgi~v~n~~~~~~~~~~~~~~~~~gg~sG~~~~~~al~~i~~  281 (336)
                      ...+....+.+||++...... ..++.+.+..+.+.|..-+++-.-+...+                .+.....|..+..
T Consensus       127 pLL~~~A~~gkPvilSTGmat-l~Ei~~Av~~i~~~g~~~i~llhC~s~YP----------------~p~~~~nL~~i~~  189 (358)
T c1vliA_         127 PLLKYVARLNRPXIFSTAGAE-ISDVHEAWRTIRAEGNNQIAIXHCVAKYP----------------APPEYSNLSVIPX  189 (358)
T ss_dssp             HHHHHHHTTCSCEEEECTTCC-HHHHHHHHHHHHTTTCCCEEEEEECSSSS----------------CCGGGCCTTHHHH
T ss_pred             HHHHHHHHCCCCEEEECCCCC-HHHHHHHHHHHHHCCCCCEEEEECCCCCC----------------CCHHHCCHHHHHH
T ss_conf             999999631897185135468-89999999999967998489995588889----------------8866737467899


Q ss_pred             HHHHCCCCCEEEEECCCCCHHHH-HHHHHCCCCEEEEC
Q ss_conf             99851899659998988999999-99997399899985
Q batch____       282 LSLELNGRLPIIGVGGIDSVIAA-REKIAAGASLVQIY  318 (336)
Q Consensus       282 i~~~~~~~ipIi~~GGI~~g~Dv-~k~l~~GAd~V~i~  318 (336)
                      +++..+ ++||-.++==..+..+ +-+.++||..+.-+
T Consensus       190 L~~~f~-~~~vG~SDHt~g~~~~~~aAvalGA~vIEKH  226 (358)
T c1vliA_         190 LAAAFP-EAVIGFSDHSEHPTEAPCAAVRLGAKLIEKH  226 (358)
T ss_dssp             HHHHST-TSEEEEEECCSSSSHHHHHHHHTTCSEEEEE
T ss_pred             HHHHCC-CCEECCCCCCCCCCHHHHHHHHCCCEEEEEE
T ss_conf             997517-8602147766554035688863030000224