327 c1nu5A_ Probab=75.24   E-value=5.5  Score=18.78  Aligned_columns=113  Identities=12%

Q ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             99999999876540478982899943899977799999999967997999934855643223334556666415500146
Q batch____       194 LTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQL  273 (336)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~Pv~vKl~~~~~~~~~~~~a~~~~~~Gvdgi~v~n~~~~~~~~~~~~~~~~~gg~sG~~~~~  273 (336)
                      .....+.....+.....+.++.+-.....+..+..+.++.+++.++..|-                         .|+.+
T Consensus       171 ~~~d~~~i~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~iE-------------------------eP~~~  225 (369)
T c1nu5A_         171 PAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELVE-------------------------QPVPR  225 (369)
T ss_dssp             HHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEEE-------------------------CCSCT
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEE-------------------------CCCCC
T ss_conf             89999999999997399969999879898999999998620007737998-------------------------79981


Q ss_pred             HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEECHHHHHCCHHHHHHHHH
Q ss_conf             89999999998518996599989889999999999739-98999855888268017999884
Q batch____       274 KSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAG-ASLVQIYSGFIFKGPPLIKEIVT  334 (336)
Q Consensus       274 ~al~~i~~i~~~~~~~ipIi~~GGI~~g~Dv~k~l~~G-Ad~V~i~t~~~~~gp~~~~~i~~  334 (336)
                      .-++...++++..  .+||.++=-+.+.+|..+++..| +|.+|+--. ..+|..-..++.+
T Consensus       226 ~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~~~~k~~-~~GGi~~~~~~~~  284 (369)
T c1nu5A_         226 ANFGALRRLTEQN--GVAILADESLSSLSSAFELARDHAVDAFSLKLC-NMGGIANTLKVAA  284 (369)
T ss_dssp             TCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHHTTCCSEEEECHH-HHTSHHHHHHHHH
T ss_pred             CCHHHHHHHHHHC--CCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEC-CCCCHHHHHHHHH
T ss_conf             4888899999874--994984887688999999998289988952125-3275789999999