Phyre 2 alignment of P0A8J2 with d1mwpa_

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Job Description | P0A8J2
Confidence | 5.06% | Date | Thu Jan 5 11:07:58 GMT 2012
Rank | 24 | Aligned Residues | 23
% Identity | 30% | Template | d1mwpa_
SCOP info | SRCR-like | A heparin-binding domain | A heparin-binding domain
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
Query SS confidence |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
Query Sequence |  | Q | A | A | P | . | V | A | V | P | M | G | K | F | A | M | Y | P | D | . | . | . | . | . | W | Q | P | D | A | D
Query Conservation |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | A | E | P | Q | I | A | M | F | C | G | R | L | N | M | H | M | N | V | Q | N | G | K | W | D | S | D | P | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | T | S | B |  |  |  |  |  | T | T | T |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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