Phyre 2 Results for P0A8J2

Email | l.a.kelley@imperial.ac.uk
Description | P0A8J2
Date | Thu Jan 5 11:07:58 GMT 2012
Unique Job ID | 84020cea99e85bf1

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3bjqA_ |
|  | 25.0 | 23 | PDB header:viral protein Chain: A: PDB Molecule:phage-related protein; PDBTitle: crystal structure of a phage-related protein (bb3626) from bordetella2 bronchiseptica rb50 at 2.05 a resolution
2 | c2e52A_ |
|  | 20.4 | 26 | PDB header:hydrolase/dna Chain: A: PDB Molecule:type ii restriction enzyme hindiii; PDBTitle: crystal structural analysis of hindiii restriction endonuclease in2 complex with cognate dna at 2.0 angstrom resolution
3 | d1m9za_ |
|  | 18.2 | 12 | Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Extracellular domain of cell surface receptors
4 | d1ks6a_ |
|  | 18.0 | 29 | Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Extracellular domain of cell surface receptors
5 | d2pjyb1 |
|  | 17.7 | 12 | Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Extracellular domain of cell surface receptors
6 | d1ploa_ |
|  | 16.7 | 12 | Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Extracellular domain of cell surface receptors
7 | c2kgmA_ |
|  | 14.9 | 41 | PDB header:signaling protein Chain: A: PDB Molecule:protein ste5; PDBTitle: solution structure of ste5pm24 in sds micelle
8 | c2l4uA_ |
|  | 11.8 | 41 | PDB header:signaling protein Chain: A: PDB Molecule:24mer peptide from protein ste5; PDBTitle: solution structure of ste5pm24 in the presence of sds micelle
9 | c1xk5A_ |
|  | 9.3 | 38 | PDB header:transport protein Chain: A: PDB Molecule:snurportin-1; PDBTitle: crystal structure of the m3g-cap-binding domain of2 snurportin1 in complex with a m3gpppg-cap dinucleotide
10 | d1ukfa_ |
|  | 9.0 | 19 | Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Avirulence protein Avrpph3
11 | d2fcwa1 |
|  | 8.9 | 32 | Fold:RAP domain-like Superfamily:RAP domain-like Family:RAP domain
12 | c3gb8B_ |
|  | 8.0 | 38 | PDB header:transport protein Chain: B: PDB Molecule:snurportin-1; PDBTitle: crystal structure of crm1/snurportin-1 complex
13 | c3gjxE_ |
|  | 7.6 | 38 | PDB header:protein transport Chain: E: PDB Molecule:snurportin-1; PDBTitle: crystal structure of the nuclear export complex crm1-2 snurportin1-rangtp
14 | c3h7hA_ |
|  | 7.3 | 41 | PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt4; PDBTitle: crystal structure of the human transcription elongation factor dsif,2 hspt4/hspt5 (176-273)
15 | c2zxrA_ |
|  | 6.3 | 44 | PDB header:hydrolase Chain: A: PDB Molecule:single-stranded dna specific exonuclease recj; PDBTitle: crystal structure of recj in complex with mg2+ from thermus2 thermophilus hb8
16 | d2foka1 |
|  | 6.2 | 16 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Restriction endonuclease FokI, N-terminal (recognition) domain
17 | c1txkA_ |
|  | 6.2 | 28 | PDB header:biosynthetic protein Chain: A: PDB Molecule:glucans biosynthesis protein g; PDBTitle: crystal structure of escherichia coli opgg
18 | d1f44a1 |
|  | 6.1 | 21 | Fold:SAM domain-like Superfamily:lambda integrase-like, N-terminal domain Family:lambda integrase-like, N-terminal domain
19 | d1j0sa_ |
|  | 6.1 | 12 | Fold:beta-Trefoil Superfamily:Cytokine Family:Interleukin-1 (IL-1)
20 | d1txka2 |
|  | 6.1 | 28 | Fold:Supersandwich Superfamily:Galactose mutarotase-like Family:MdoG-like
21 | d2ftua1 |
| not modelled | 6.0 | 32 | Fold:RAP domain-like Superfamily:RAP domain-like Family:RAP domain
22 | c2kgnA_ |
| not modelled | 6.0 | 41 | PDB header:signaling protein Chain: A: PDB Molecule:protein ste5; PDBTitle: solution structure of ste5pm24 in the zwitterionic dpc2 micelle
23 | c2hyiJ_ |
| not modelled | 5.7 | 29 | PDB header:hydrolase/rna binding protein/rna Chain: J: PDB Molecule:protein casc3; PDBTitle: structure of the human exon junction complex with a trapped2 dead-box helicase bound to rna