Phyre 2 alignment of P0A8J2 with c3h5jA_

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Job Description | P0A8J2
Confidence | 2.49% | Date | Thu Jan 5 11:07:58 GMT 2012
Rank | 68 | Aligned Residues | 38
% Identity | 16% | Template | c3h5jA_
PDB info | PDB header:lyase | Chain: A: PDB Molecule:3-isopropylmalate dehydratase small subunit; | PDBTitle: leud_1-168 small subunit of isopropylmalate isomerase (rv2987c) from2 mycobacterium tuberculosis
Resolution | 1.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | G | S | D | V | A | L | D | D | Q | L | Y | Q | E | P | Q | A | A | P | V | A | V | P | M | G | K | F | A | M | Y | P | D | W | Q | P | D | A | D | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template Sequence |  | R | R | S | N | V | D | T | D | Q | I | I | P | A | V | F | L | K | R | V | T | R | T | G | F | E | D | G | L | F | A | G | . | W | R | S | D | P | A | F
Template Known Secondary structure |  |  |  |  | S |  |  |  |  |  |  | S |  | G | G | G | T | T |  |  | S |  | S |  |  | G | G | G | T | T | T | T | . | G | G | G | S | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |  | . | . | . | . | 50 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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