>ss_pred
CCCCCCCCCCHHHHHHCCCCCHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>ss_conf
98520012200011220185011011007657865378975587559999999976764400234321123211311220110257766688888989889999998474557436999979999998218873320218999999999998740466655577545787558987689
>batch____
MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTVSEPDSQIPPGFRG
>UniRef50_B5XSL9(157-250:327) Conserved domain protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5XSL9_KLEP3  E=3e-20 s/c=1.06 id=50% cov=49%
------------------------------------------------------------------------FPQQPKYLPgVDIPIGKFTMHDLWLPSQDWPRLAATWGIALPEPAyLPTELAEFTAYWKSEGKVFTQIQWEQKFARSVISARAKSKPQP--------------------
>UniRef50_A1AE33(181-256:282) Putative uncharacterized protein n=1 Tax=Escherichia coli APEC O1 RepID=A1AE33_ECOK1  E=2e-16 s/c=1.15 id=57% cov=41%
------------------------------------------------------------------------------------PIGKFPMTDGWLPSPDFRRRAALWGTALPEPeFTPAELAAFRDYWMAEGKVFTQVQWEQKFARHVNhiRGKSKNAG----------------------
>UniRef50_A4WB53(126-229:310) Pyocin large subunit-like protein n=2 Tax=root RepID=A4WB53_ENT38   E=7e-16 s/c=0.82 id=49% cov=39%
------------------------------------------------------------------------------------PIGKFTMTSNWLPSFDFRQRAAQWGIQLPDPdYLDSELAEFAAYWNSEGKVFTQIQWEQKFARHVVLVRS--------------------------
>UniRef50_B4TGX9(1-179:179) Primosomal protein 1 n=112 Tax=Enterobacteriaceae RepID=DNAT_SALHS   E=2e-73 s/c=1.55 id=81% cov=101%
MSSRILTSDVIGIDVLLHDHHAVLAKSTGGAVAVFANNAPAFYAVTPARMAELLALEEKLSRPGSDVALDAQFYEEPEAAPVAIPCGKFAMYPAWQPDADFQRQAALWGVALREPVTAEELAAFIAYWQAEGKVFHHIQWQQKLARSVQISRSSNGGMPQRDINSVSEPDNHIPPGFRG
>UniRef50_B8D8I5(2-163:164) Primosomal protein 1 n=4 Tax=Buchnera aphidicola RepID=DNAT_BUCA5   E=7e-59 s/c=1.41 id=46% cov=91%
---KILISDNISLELFCKNPIKILEKSNKGIIGVLKNKSPIFYVITPYILKKIFDLECNL------LDLDKTKQQISK---------KFSMHPQWTPDKDFIRQAALWGITLTEEILESELASFISYWQAEGCFFHHIQWQQKLARSLQKSRSiSYMSQKKRDITYIPTPDQTVPNGFRG
>UniRef50_B5R8P0(169-271:332) Predicted phage protein n=9 Tax=Salmonella enterica subsp. enterica RepID=B5R8P0_SALG2  E=5e-32 s/c=1.35 id=45% cov=50%
------------------------------------------------------------------------------------PIGKFSMMDDWHPSLDFRQRAAHWGVALPEPeYLPTELVAFRDYWTSEGKVFTQIQWEQKFARHVNHVRAKAKPASRGESHAEIQPDST-------
>UniRef50_C8TPK4(187-281:345) Replication protein n=42 Tax=Escherichia RepID=C8TPK4_ECO26   E=8e-31 s/c=1.42 id=55% cov=47%
------------------------------------------------------------------------------------PIGKFPMTGVWQPSPDFRQRAAVWGMALPEPeFTPAELAAFRDYWMAEGKVFTQVQWEQKFARHVQHVRAQ--------VKPVSKGVSHAAPG---
>UniRef50_B7UGT1(177-263:268) Predicted primosomal protein n=2 Tax=root RepID=B7UGT1_ECO27   E=1e-30 s/c=1.54 id=47% cov=47%
--------------------------------------------------------------------------------------GKFVMHELWSPSDDFLRVSSLQGINLDCQPTPQELAEFRVYWMAEGKAFHHAQWEQKLARRLQISRQNKLTSPENNVPHWNSPE---------
>UniRef50_A4SJ92(38-202:232) Putative uncharacterized protein n=2 Tax=Aeromonas RepID=A4SJ92_AERS4  E=5e-28 s/c=0.76 id=38% cov=39%
-----------------------------------------------------------------------------------LPERPFQMHLQWRPDEELPALARLCGV-IDASYNEEDLGEFIAYWLGRPEVFdSQHQWMLKFIRALKTRR---------------------------
>UniRef50_B7NQU2(180-264:277) Putative primosomal protein from phage n=1 Tax=Escherichia coli IAI39 RepID=B7NQU2_ECO7I  E=1e-27 s/c=1.46 id=48% cov=42%
--------------------------------------------------------------------------------------GKFVMHEQWQPSDDFLRKSSLQGIYLDSLPTAQELAEFRIYWMAEGKAYHQAQWEQKLARRIQFCRQKSGEVRK-------------------
>UniRef50_C8SYQ2(1-88:91) Primosomal protein 1 n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8SYQ2_KLEPR  E=1e-26 s/c=1.38 id=38% cov=49%
------------------------------------------------------------------------------------------MHENWQPSEDFVMRARTWGHALPaDGYKKSDLIEFITYWMAEGNVMQHVQWEQKFAR-LLMNRKKRAAGKRGESSDDEVPHWNSPEGWK-
>UniRef50_A1AE33(178-268:282) Putative uncharacterized protein n=1 Tax=Escherichia coli APEC O1 RepID=A1AE33_ECOK1  E=8e-30 s/c=1.44 id=53% cov=44%
------------------------------------------------------------------------------------PIGKFPMTDGWLPSPDFRRRAALWGTALPEPeFTPAELAAFRDYWMAEGKVFTQVQWEQKFARHVNHIRGKSKNAGKSD-----------------
>UniRef50_B1LPY0(194-285:346) Conserved domain protein n=21 Tax=Escherichia coli RepID=B1LPY0_ECOSM  E=7e-29 s/c=1.39 id=56% cov=39%
------------------------------------------------------------------------------------PIGKFPMTDSWYPSRDFRRRAALWGMALPEtEFTPAELAAFRDYWAAEGKVFTQIQWEQKFARHVNHVRA--------------------------
>UniRef50_Q2NTN9(187-262:328) Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NTN9_SODGM  E=7e-25 s/c=1.51 id=48% cov=43%
------------------------------------------------------------------------------------PIDKFTMHDDWLLDEEFSRKAATWGIVLDEPPTATELAEFITFWKAEGKAKHHAQWEQALTKSIRRSREFTGKRGK-------------------
>UniRef50_Q15MT1(33-182:224) Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15MT1_PSEA6  E=5e-24 s/c=0.75 id=29% cov=56%
-------------------------------------------------IKELLHVE--LVSFVEEVDLNKSFNGKILTLPLLMikPDDYSQLHLQWQkmsanwtPNATLYQdLAKLVGI-IDSDFSDHELGDFVAYWLGRPQTqFTQFQWTQKFVFNVKQKR---------------------------
>UniRef50_B6XEX0(176-250:317) Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=B6XEX0_9ENTR  E=2e-23 s/c=1.47 id=49% cov=39%
---------------------------------------------------------------------------------------KFVMYHGWEPGQDFTQKAAYWGTILKEPLQPHELAEFITYWGAEGKAKTHEQWELALAKGLKHSRLKN------------------------
>UniRef50_B4RS94(76-194:222) Flavodoxin n=2 Tax=Alteromonas macleodii RepID=B4RS94_ALTMD   E=5e-22 s/c=0.89 id=34% cov=42%
-----------------------------------------------------------------------------------------AMTATWAPNKAlFEEMASLLGI-IDKTYDDNEVGEFIAYWLGRPsSVFSEFQWTQKFANNIKRKRLASGYAPTKVVGT--------------
>UniRef50_UPI0000E0EB69(33-202:220) flavodoxin n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0EB69  E=4e-18 s/c=0.55 id=35% cov=35%
-----------------------------------------------------------------------------------------SMHLKWLPDQlLYKELAAMVGL-LATDYDLEDVGEFITYWMGRPQsRFTPFQWTQKFV--LQRKQAA-------------------------
>UniRef50_A4BGB5(124-226:249) Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGB5_9GAMM  E=5e-13 s/c=0.74 id=28% cov=34%
---------------------------------------------------------------------------------------KTAMHSDWEPSEDFPRLLEF--HDIPLQFALSELGKFRQYYLATDR--KEISWDVRYLNWVQRA----------------------------
>UniRef50_B3PDS0(161-271:367) Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDS0_CELJU  E=3e-06 s/c=0.48 id=28% cov=32%
-----------------------------------------------------------------------------------------AMHSHWRPSRDALEvLVKHAGISL--AFVEDAIPEFVVYWQERGDVGR--TWNSKFIQHVK------------------------------
>UniRef50_B8KWA0(260-342:359) Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KWA0_9GAMM  E=0.0002 s/c=0.58 id=23% cov=31%
------------------------------------------------------------------------------------------MPEQWQPDENVYDILRMAGV--DREFAVALVPEFALYWRDSNEL--HTSWNSKFLQHVK------------------------------
>UniRef50_C4LC81(33-204:225) Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LC81_TOLAT  E=1e-39 s/c=0.95 id=29% cov=88%
-----------------HQPVPINYPELGRALAVEDPQVPGgfSYQVTARQLTQLFDelIQAGLIQLQAATASSDHYHQQYVTLPLLISqvaplaQQAFAMHTEWQPDNQFTGLCQLCGL-IDPHYDEEERGEFIAYWLGRPERFsTQHQWMMKFVkmlksRRYQRRQTENIGYQQTTVATAAQNISTEP-----
>UniRef50_B0KHD4(160-249:303) Putative uncharacterized protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KHD4_PSEPG  E=2e-13 s/c=0.86 id=25% cov=36%
---------------------------------------------------------------------------------------RFAMTADWQPSQKTFQAVLLQMGITQQAVDQDQFLEFRSFWLASPdDHRTQAKWEHALASHLKRN----------------------------
>UniRef50_C5BTM7(278-358:444) Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTM7_TERTT  E=3e-12 s/c=0.90 id=21% cov=32%
------------------------------------------------------------------------------------------MHDNWRPSPDAMEMLTVHSG-VRSEFCEDAIPEFVFYWKDVGDA--HKNWNAKFVQHVRL-----------------------------
>UniRef50_C5BTM7(133-186:444) Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTM7_TERTT  E=5e-11 s/c=1.29 id=36% cov=22%
--------------------------------------------------------------------------------------------PQWQPDHHT--LAQLAQHNIPENFARQQVPEFITYWRERG-----------------------------------------------
>UniRef50_B3PDS0(69-155:367) Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDS0_CELJU  E=2e-09 s/c=0.74 id=33% cov=24%
--------------------------------------------------------------------------------------------PHWQPDTELLKRIAE--HNIPEYFIRQQLPEFITYWRERGEISH-------------------------------------------
>UniRef50_Q1YQT9(146-230:398) Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQT9_9GAMM  E=1e-11 s/c=0.84 id=24% cov=35%
-----------------------------------------------------------------------------------IPTSAKTMGNSWQPSQDAMRQLSQLGVT--QLFAQQQIPQFVTYWRERNVPRH--SWESKFIKEV-------------------------------
>UniRef50_Q1YQT9(232-297:398) Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQT9_9GAMM  E=3e-06 s/c=0.81 id=20% cov=25%
---------------------------------------------------------------------------------------------------------------------EDSIPEFILYWRDRGDLSS--TWDSKFIQHIRRQWQFFSGMMEQD-----------------
>UniRef50_Q21NR3(215-296:384) Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21NR3_SACD2  E=2e-11 s/c=0.87 id=19% cov=46%
-----------------------------------------------------------------------------------------AMHAAWQPSLDAMDVLTVHAG-ISRGFVEDAIPEFVLYWQERGDVLK--TWNSKFIQHVRLQWKKYNSAVEHSTDPKPIPENWQP-----
>UniRef50_B7RW88(131-182:376) Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RW88_9GAMM  E=6e-10 s/c=1.27 id=32% cov=26%
----------------------------------------------------------------------------------------------WSPSEDLLQLMAL-NHNIPRQFALDQLEDFIFYWRERGETSH--AWENK------------------------------------
