16/01/2012 17:12:30 : INFO  : Run start: Mon Jan 16 17:12:29 GMT 2012
16/01/2012 17:12:34 : INFO  : Initialised job
16/01/2012 17:12:35 : INFO  : Renaming log file 'phyre2_20120116_171229.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/84020cea99e85bf1/phyre_20120116_171229.log'
16/01/2012 17:12:36 : INFO  : Initialised job:
Sequence
>batch____
MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKL
ARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEE
LASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTVSEPDSQIPPGFRG

16/01/2012 17:12:36 : INFO  : Checked sequence
16/01/2012 17:12:38 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 17:12:39 : INFO  : PSI-BLAST 3 iterations
16/01/2012 17:13:37 : INFO  : PSI-BLAST 5 iterations
16/01/2012 17:14:32 : INFO  : Finished PSI-BLAST
16/01/2012 17:14:33 : INFO  : Running Buildali to generate a3m file
16/01/2012 17:16:50 : INFO  : Converting to HMM
16/01/2012 17:16:51 : INFO  : Calibrating HMM
16/01/2012 17:17:00 : INFO  : Searching HMM database
16/01/2012 17:21:17 : INFO  : Finished buildali
16/01/2012 17:21:17 : INFO  : Predicting secondary structure
16/01/2012 17:21:22 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 17:21:23 : INFO  : Predicting Disordered regions
16/01/2012 17:21:26 : INFO  : Predicted Disorder (Disopred)
16/01/2012 17:21:27 : INFO  : Running memsat_svm check
16/01/2012 17:23:20 : INFO  : Globular protein
16/01/2012 17:23:21 : INFO  : Predicted Transmembrane (memsat_svm) ID '84020cea99e85bf1'
16/01/2012 17:23:22 : INFO  : Initialising fold library search
16/01/2012 17:23:24 : INFO  : Initialised search input
16/01/2012 17:23:25 : INFO  : Building Ensemble models
16/01/2012 17:23:27 : INFO  : Building hh.c3bjqA_.model.1.pdb
16/01/2012 17:23:37 : INFO  : Building c3bjqA_.1.pdb
16/01/2012 17:23:46 : INFO  : Building c2e52A_.2.pdb
16/01/2012 17:23:55 : INFO  : Building d1m9za_.3.pdb
16/01/2012 17:24:04 : INFO  : Building d1ks6a_.4.pdb
16/01/2012 17:24:13 : INFO  : Building d2pjyb1.5.pdb
16/01/2012 17:24:22 : INFO  : Building d1ploa_.6.pdb
16/01/2012 17:24:31 : INFO  : Building c2kgmA_.7.pdb
16/01/2012 17:24:40 : INFO  : Building c2l4uA_.8.pdb
16/01/2012 17:24:49 : INFO  : Building c1xk5A_.9.pdb
16/01/2012 17:24:58 : INFO  : Building d1ukfa_.10.pdb
16/01/2012 17:25:08 : INFO  : Building d2fcwa1.11.pdb
16/01/2012 17:25:20 : INFO  : Building c3gb8B_.12.pdb
16/01/2012 17:25:31 : INFO  : Building c3gjxE_.13.pdb
16/01/2012 17:25:43 : INFO  : Building c3h7hA_.14.pdb
16/01/2012 17:25:52 : INFO  : Building c2zxrA_.15.pdb
16/01/2012 17:26:03 : INFO  : Building d2foka1.16.pdb
16/01/2012 17:26:14 : INFO  : Building c1txkA_.17.pdb
16/01/2012 17:26:21 : INFO  : Building d1f44a1.18.pdb
16/01/2012 17:26:30 : INFO  : Building d1j0sa_.19.pdb
16/01/2012 17:26:40 : INFO  : Building d1txka2.20.pdb
16/01/2012 17:27:02 : INFO  : Finished HH model building
16/01/2012 17:27:04 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 17:28:37 : INFO  : html domain output complete ID '84020cea99e85bf1'
16/01/2012 17:34:43 : INFO  : Run end  : Mon Jan 16 17:34:42 GMT 2012
