Phyre 2 alignment of P0A8J2 with c2xzm8_

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Job Description | P0A8J2
Confidence | 2.01% | Date | Thu Jan 5 11:07:58 GMT 2012
Rank | 96 | Aligned Residues | 25
% Identity | 28% | Template | c2xzm8_
PDB info | PDB header:ribosome | Chain: 8: PDB Molecule:rps25e,; | PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
Resolution | 3.93 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 38 | . | 40 | . | . |  | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | .
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Query Sequence |  | N | A | P | A | F | . | Y | A | V | T | P | A | R | L | A | E | L | L | A | L | E | E | K | L | A | R
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Template Sequence |  | N | P | S | K | V | G | K | V | L | T | V | S | T | V | V | E | K | L | K | V | N | G | S | L | A | R
Template Known Secondary structure |  |  |  | T | T | S |  | S |  |  |  |  |  |  |  |  |  |  |  |  | B |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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