Phyre 2 alignment of P0A8J2 with c3iz5W_

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Job Description | P0A8J2
Confidence | 4.24% | Date | Thu Jan 5 11:07:58 GMT 2012
Rank | 33 | Aligned Residues | 31
% Identity | 19% | Template | c3iz5W_
PDB info | PDB header:ribosome | Chain: W: PDB Molecule:60s ribosomal protein l22 (l22e); | PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution | 5.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . |  | . | . | . | . |  |  | . | . | 30 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | V | V | G | I | D | A | L | V | H | D | H | Q | T | V | . | L | A | K | A | . | . | E | G | G | V | V | A | V | F | A | N | N | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | I | A | S | L | E | K | F | L | Q | E | R | I | K | V | A | G | G | K | A | G | N | L | G | D | S | V | T | V | T | R | D | K | T
Template Known Secondary structure |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  | S | S | S |  |  |  |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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