Phyre 2 alignment of P27844 with c2kluA_

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Job Description | P27844
Confidence | 4.34% | Date | Thu Jan 5 11:44:19 GMT 2012
Rank | 16 | Aligned Residues | 26
% Identity | 23% | Template | c2kluA_
PDB info | PDB header:immune system, membrane protein | Chain: A: PDB Molecule:t-cell surface glycoprotein cd4; | PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | V | T | F | A | F | I | W | V | A | L | A | I | F | V | M | D | A | I | Y | T | Q | R | R | T | S | K
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Template Sequence |  | V | A | G | L | L | L | F | I | G | L | G | I | F | F | S | V | R | S | R | H | R | R | R | Q | A | E
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  | S | S | S |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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