18/01/2012 12:22:31 : INFO  : Run start: Wed Jan 18 12:22:31 GMT 2012
18/01/2012 12:22:31 : INFO  : Initialised job
18/01/2012 12:22:31 : INFO  : Renaming log file 'phyre2_20120118_122231.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/83a8223a1e4eab78/phyre_20120118_122231.log'
18/01/2012 12:22:31 : INFO  : Initialised job:
Sequence
>batch____
MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQW
SYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF
LGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGML
IETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS
TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK

18/01/2012 12:22:31 : INFO  : Checked sequence
18/01/2012 12:22:31 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 12:22:32 : INFO  : PSI-BLAST 3 iterations
18/01/2012 12:25:59 : INFO  : PSI-BLAST 5 iterations
18/01/2012 12:32:23 : INFO  : Finished PSI-BLAST
18/01/2012 12:32:23 : INFO  : Running Buildali to generate a3m file
18/01/2012 13:17:37 : INFO  : Converting to HMM
18/01/2012 13:17:42 : INFO  : Calibrating HMM
18/01/2012 13:17:49 : INFO  : Searching HMM database
18/01/2012 13:23:09 : INFO  : Finished buildali
18/01/2012 13:23:09 : INFO  : Predicting secondary structure
18/01/2012 13:23:10 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 13:23:10 : INFO  : Predicting Disordered regions
18/01/2012 13:23:10 : INFO  : Predicted Disorder (Disopred)
18/01/2012 13:23:10 : INFO  : Running memsat_svm check
18/01/2012 13:26:04 : INFO  : Running memsat_svm full
18/01/2012 13:29:51 : INFO  : Predicted Transmembrane (memsat_svm) ID '83a8223a1e4eab78'
18/01/2012 13:29:51 : INFO  : Initialising fold library search
18/01/2012 13:29:52 : INFO  : Initialised search input
18/01/2012 13:29:52 : INFO  : Building Ensemble models
18/01/2012 13:29:52 : INFO  : Building hh.d1s7ba_.model.1.pdb
18/01/2012 13:29:52 : INFO  : Building d1s7ba_.1.pdb
18/01/2012 13:29:53 : INFO  : Building c2i68B_.2.pdb
18/01/2012 13:29:53 : INFO  : Building c3aqpB_.3.pdb
18/01/2012 13:29:53 : INFO  : Building d1iwga8.4.pdb
18/01/2012 13:29:54 : INFO  : Building c2jp3A_.5.pdb
18/01/2012 13:29:54 : INFO  : Building c3rkoF_.6.pdb
18/01/2012 13:29:55 : INFO  : Building c3giaA_.7.pdb
18/01/2012 13:29:55 : INFO  : Building c3lrcC_.8.pdb
18/01/2012 13:29:56 : INFO  : Building c2mltB_.9.pdb
18/01/2012 13:29:56 : INFO  : Building c2mltA_.10.pdb
18/01/2012 13:29:56 : INFO  : Building c3hd6A_.11.pdb
18/01/2012 13:29:57 : INFO  : Building c2hg5D_.12.pdb
18/01/2012 13:29:57 : INFO  : Building c2kncB_.13.pdb
18/01/2012 13:29:58 : INFO  : Building d1iwga7.14.pdb
18/01/2012 13:29:58 : INFO  : Building c2jo1A_.15.pdb
18/01/2012 13:29:59 : INFO  : Building c2kluA_.16.pdb
18/01/2012 13:29:59 : INFO  : Building c3b8eB_.17.pdb
18/01/2012 13:29:59 : INFO  : Building c3mk7K_.18.pdb
18/01/2012 13:30:00 : INFO  : Building d3dtua1.19.pdb
18/01/2012 13:30:01 : INFO  : Building d3dtub2.20.pdb
18/01/2012 13:30:02 : INFO  : Finished HH model building
18/01/2012 13:30:02 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 13:30:05 : INFO  : html domain output complete ID '83a8223a1e4eab78'
18/01/2012 13:34:26 : INFO  : Run end  : Wed Jan 18 13:34:26 GMT 2012
