227 d1yuba_ Probab=99.22   E-value=8.2e-13  Score=93.90  Aligned_columns=129  Identities=13%

Q ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHH
Q ss_conf             85799999999766206997699736670489999986599889999846068999998999719970523404637630
Q batch____        35 TTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL  114 (198)
Q Consensus        35 ~~~~v~e~~f~~l~~~~~g~~vLDl~~GtG~~~iea~srga~~v~~vD~~~~a~~~a~~N~~~~~l~~i~~i~~d~~~~l  114 (198)
                      +...+.+.+.+.++. .+|.+|||+|||+|.++.+++.++ .+|+++|+|+.+++.++++....  ++++++++|+.+ +
T Consensus        13 ~d~~i~~~iv~~~~~-~~~~~VLEIG~G~G~lT~~L~~~~-~~v~aiEid~~l~~~l~~~~~~~--~~~~ii~~D~l~-~   87 (245)
T d1yuba_          13 TSEKVLNQIIKQLNL-KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKLN--TRVTLIHQDILQ-F   87 (245)
T ss_dssp             CCTTTHHHHHHHCCC-CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTTC--SEEEECCSCCTT-T
T ss_pred             CCHHHHHHHHHHCCC-CCCCEEEEECCCCCHHHHHHHHHC-CCEEEEECCHHHHHHHHHHCCCC--CCEEEEECCHHC-C
T ss_conf             798999999996588-878889997798738999998613-95499935999999999742568--966999743210-8


Q ss_pred             HHHCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHCCCCC
Q ss_conf             111012452020683244206999999986588788819998526534520203794
Q batch____       115 AQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANW  171 (198)
Q Consensus       115 ~~~~~~fD~V~~dPPy~~~~~~~~l~~l~~~~~L~~~g~ivie~~~~~~~~~~~~~~  171 (198)
                      +..+..+|.|++|+||.  ..+.++..+...... .+.+++++......+....+.+
T Consensus        88 ~~~~~~~~~vv~NlPY~--iss~il~~~l~~~~~-~~~v~m~Qke~a~Rl~a~~g~l  141 (245)
T d1yuba_          88 QFPNKQRYKIVGNIPYH--LSTQIIKKVVFESRA-SDIYLIVEEGFYKRTLDIHRTL  141 (245)
T ss_dssp             TCCCSSEEEEEEECCSS--SCHHHHHHHHHHCCC-EEEEEEEESSHHHHHHCGGGSH
T ss_pred             CCCCCCCCEEEEECCHH--HHHHHHHHHHHCCCC-CEEEEEEEHHHHHHHHCCCCHH
T ss_conf             88877833798408500--013899999731793-2299985488877554488657