15/01/2012 07:50:38 : INFO  : Run start: Sun Jan 15 07:50:37 GMT 2012
15/01/2012 07:50:43 : INFO  : Initialised job
15/01/2012 07:50:45 : INFO  : Renaming log file 'phyre2_20120115_075036.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/8340449e0b2aa36e/phyre_20120115_075036.log'
15/01/2012 07:50:46 : INFO  : Initialised job:
Sequence
>batch____
MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHAR
FAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRP
LADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFA
WMRFQF

15/01/2012 07:50:47 : INFO  : Checked sequence
15/01/2012 07:50:51 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 07:50:52 : INFO  : PSI-BLAST 3 iterations
15/01/2012 07:52:08 : INFO  : PSI-BLAST 5 iterations
15/01/2012 07:53:00 : INFO  : Finished PSI-BLAST
15/01/2012 07:53:03 : INFO  : Running Buildali to generate a3m file
15/01/2012 07:55:03 : INFO  : Converting to HMM
15/01/2012 07:55:05 : INFO  : Calibrating HMM
15/01/2012 07:55:17 : INFO  : Searching HMM database
15/01/2012 07:58:45 : INFO  : Finished buildali
15/01/2012 07:58:48 : INFO  : Predicting secondary structure
15/01/2012 07:58:54 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 07:58:56 : INFO  : Predicting Disordered regions
15/01/2012 07:58:59 : INFO  : Predicted Disorder (Disopred)
15/01/2012 07:59:00 : INFO  : Running memsat_svm check
15/01/2012 08:02:18 : INFO  : Globular protein
15/01/2012 08:02:19 : INFO  : Predicted Transmembrane (memsat_svm) ID '8340449e0b2aa36e'
15/01/2012 08:02:23 : INFO  : Initialising fold library search
15/01/2012 08:02:29 : INFO  : Initialised search input
15/01/2012 08:02:31 : INFO  : Building Ensemble models
15/01/2012 08:02:35 : INFO  : Building hh.d1thqa_.model.1.pdb
15/01/2012 08:02:53 : INFO  : Building d1thqa_.1.pdb
15/01/2012 08:03:08 : INFO  : Building d1c8na_.2.pdb
15/01/2012 08:03:23 : INFO  : Building c4sbvC_.3.pdb
15/01/2012 08:03:39 : INFO  : Building d4sbvc_.4.pdb
15/01/2012 08:03:53 : INFO  : Building d4sbva_.5.pdb
15/01/2012 08:04:07 : INFO  : Building d1f2nc_.6.pdb
15/01/2012 08:04:53 : INFO  : Building d2vq0a1.7.pdb
15/01/2012 08:06:16 : INFO  : Building c1x35C_.8.pdb
15/01/2012 08:06:32 : INFO  : Building d1smva_.9.pdb
15/01/2012 08:06:48 : INFO  : Building c2izwC_.10.pdb
15/01/2012 08:07:03 : INFO  : Building c1c8nC_.11.pdb
15/01/2012 08:07:21 : INFO  : Building d1c8nc_.12.pdb
15/01/2012 08:07:36 : INFO  : Building c1f2nA_.13.pdb
15/01/2012 08:07:52 : INFO  : Building d1f2na_.14.pdb
15/01/2012 08:08:06 : INFO  : Building d1ng0c_.15.pdb
15/01/2012 08:08:22 : INFO  : Building d1ng0a_.16.pdb
15/01/2012 08:08:38 : INFO  : Building c1ng0A_.17.pdb
15/01/2012 08:08:53 : INFO  : Building d1smvc_.18.pdb
15/01/2012 08:09:09 : INFO  : Building d2tbvc_.19.pdb
15/01/2012 08:09:26 : INFO  : Building d2axtz1.20.pdb
15/01/2012 08:10:03 : INFO  : Finished HH model building
15/01/2012 08:10:05 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 08:11:02 : INFO  : html domain output complete ID '8340449e0b2aa36e'
15/01/2012 08:16:34 : INFO  : Run end  : Sun Jan 15 08:16:33 GMT 2012
