Phyre 2 alignment of P37001 with c2inyA_

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Job Description | P37001
Confidence | 6.01% | Date | Thu Jan 5 11:54:10 GMT 2012
Rank | 39 | Aligned Residues | 42
% Identity | 26% | Template | c2inyA_
PDB info | PDB header:viral protein | Chain: A: PDB Molecule:hexon protein; | PDBTitle: nanoporous crystals of chicken embryo lethal orphan (celo) adenovirus2 major coat protein, hexon
Resolution | 3.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |  | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | G | W | E | S | T | W | R | P | L | A | D | E | N | F | H | L | G | L | G | F | T | A | G | V | T | A | R | . | D | N | W | N | Y | I | P | L | P | V | L | L | P | L | A | S | V | G | Y | G | P | V | T | F | Q | M | T | Y | I | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | T | Y | E | . | . | W | V | . | . | L | R | K | D | P | N | M | I | L | Q | S | S | L | G | N | D | L | R | A | D | G | . | . | . | . | . | . | . | . | . | . | . | . | A | Q | I | V | Y | T | E | V | N | L | M | A | N | F | M | P
Template Known Secondary structure |  |  |  |  |  | . | . |  |  | . | . |  |  |  |  | T | T | T | S |  |  |  | S | S |  |  |  | S | T | T | T | T | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  | B |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 548 | . | 550 | . |  |  | . | . |  |  | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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