BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (429 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B2VK95 Ribosomal RNA small subunit methyltransferase B ... 660 0.0 UniRef50_Q2NQQ2 Ribosomal RNA small subunit methyltransferase B ... 594 e-168 UniRef50_B5FCW8 Ribosomal RNA small subunit methyltransferase B ... 521 e-146 UniRef50_Q12TA7 Sun protein n=8 Tax=Gammaproteobacteria RepID=Q1... 441 e-122 UniRef50_Q8EKR0 Ribosomal RNA small subunit methyltransferase B ... 419 e-115 UniRef50_Q88B41 Ribosomal RNA small subunit methyltransferase B ... 371 e-101 UniRef50_Q88RR3 Ribosomal RNA small subunit methyltransferase B ... 365 2e-99 UniRef50_A4BK87 Putative uncharacterized protein n=1 Tax=Reineke... 362 1e-98 UniRef50_Q31J86 Ribosomal RNA small subunit methyltransferase B ... 359 1e-97 UniRef50_B3PGY5 Ribosomal RNA small subunit methyltransferase B ... 356 9e-97 UniRef50_P45679 Ribosomal RNA small subunit methyltransferase B ... 352 1e-95 UniRef50_A1TWM9 Sun protein n=3 Tax=Marinobacter RepID=A1TWM9_MARAV 350 5e-95 UniRef50_Q2BQD6 Fmu, rRNA SAM-dependent methyltransferase n=1 Ta... 348 2e-94 UniRef50_B8KLT3 Ribosomal RNA small subunit methyltransferase B ... 345 3e-93 UniRef50_D1RHX8 Ribosomal RNA small subunit methyltransferase B ... 340 9e-92 UniRef50_Q603G1 Sun protein n=1 Tax=Methylococcus capsulatus Rep... 338 3e-91 UniRef50_A4BP82 Fmu, rRNA SAM-dependent methyltransferase n=1 Ta... 337 4e-91 UniRef50_Q5ZSC6 rRNA methyltransferase (SUN protein) n=5 Tax=Gam... 336 1e-90 UniRef50_C0N5F9 Ribosomal RNA small subunit methyltransferase B ... 329 1e-88 UniRef50_B5JST2 Ribosomal RNA small subunit methyltransferase B ... 327 7e-88 UniRef50_Q2SQX3 Sun protein n=1 Tax=Hahella chejuensis KCTC 2396... 325 2e-87 UniRef50_UPI0000E0DBE4 Putative Sun protein n=1 Tax=Rhodobactera... 325 3e-87 UniRef50_B9ZKR1 Sun protein n=2 Tax=Chromatiales RepID=B9ZKR1_9GAMM 324 4e-87 UniRef50_C7RA09 Sun protein n=1 Tax=Kangiella koreensis DSM 1606... 322 1e-86 UniRef50_A8PKU4 Ribosomal RNA small subunit methyltransferase B ... 320 5e-86 UniRef50_D1KD39 Ribosomal RNA small subunit methyltransferase B ... 317 7e-85 UniRef50_Q87AR1 Ribosomal RNA small subunit methyltransferase B ... 314 5e-84 UniRef50_A3MAA2 16S rRNA m5C967 SAM-dependent methyltransferase ... 313 7e-84 UniRef50_A6VR79 Sun protein n=2 Tax=Marinomonas RepID=A6VR79_MARMS 311 2e-83 UniRef50_C6P2V1 Sun protein n=1 Tax=Sideroxydans lithotrophicus ... 308 3e-82 UniRef50_A1WZH2 Sun protein n=1 Tax=Halorhodospira halophila SL1... 306 1e-81 UniRef50_Q2YC21 Sun protein n=7 Tax=Betaproteobacteria RepID=Q2Y... 305 2e-81 UniRef50_A1AVP0 Sun protein n=1 Tax=Candidatus Ruthia magnifica ... 304 5e-81 UniRef50_C5V0U6 Sun protein n=1 Tax=Gallionella ferruginea ES-2 ... 301 2e-80 UniRef50_A1KRE7 SUN-family protein n=32 Tax=Neisseriaceae RepID=... 300 6e-80 UniRef50_A0Z2Z6 Sun protein n=2 Tax=unclassified Gammaproteobact... 298 3e-79 UniRef50_Q5P4P8 tRNA and rRNA cytosine-C5-methylases sun n=8 Tax... 289 2e-76 UniRef50_A5EWM0 RRNA SAM-dependent methyltransferase, Fmu n=2 Ta... 288 2e-76 UniRef50_D2UG22 Putative trna and rrna cytosine-c5-methylase pro... 286 1e-75 UniRef50_B7J3C2 Sun protein n=2 Tax=Acidithiobacillus ferrooxida... 276 8e-73 UniRef50_Q0VTE3 tRNA and rRNA cytosine-C5-methylase, putative n=... 273 1e-71 UniRef50_C7I4U3 Sun protein n=1 Tax=Thiomonas intermedia K12 Rep... 267 5e-70 UniRef50_B3R820 16S rRNA m5C967 methyltransferase, S-adenosyl-L-... 265 2e-69 UniRef50_D0KVS1 Sun protein n=1 Tax=Halothiobacillus neapolitanu... 265 2e-69 UniRef50_C0AZZ3 Putative uncharacterized protein n=1 Tax=Proteus... 259 9e-68 UniRef50_C6NTF2 Ribosomal RNA small subunit methyltransferase B ... 258 4e-67 UniRef50_Q2T2A8 Sun protein n=76 Tax=Proteobacteria RepID=Q2T2A8... 257 5e-67 UniRef50_A1WK57 Sun protein n=17 Tax=cellular organisms RepID=A1... 255 2e-66 UniRef50_B2SFT3 tRNA and rRNA cytosine-C5-methylase, sun protein... 253 1e-65 UniRef50_UPI0000E87C3C sun; rRNA methylase n=1 Tax=Methylophilal... 241 5e-62 UniRef50_C8PZ41 Ribosomal RNA small subunit methyltransferase B ... 238 4e-61 UniRef50_A4T0M4 Sun protein n=2 Tax=Polynucleobacter necessarius... 236 1e-60 UniRef50_A6GKY6 Putative uncharacterized protein n=1 Tax=Limnoba... 235 3e-60 UniRef50_C0GIQ4 Sun protein n=1 Tax=Dethiobacter alkaliphilus AH... 234 4e-60 UniRef50_A5WI31 Fmu (Sun) domain protein n=3 Tax=Psychrobacter R... 229 1e-58 UniRef50_A8FD39 rRNA SAM-dependent methyltransferase RmsB n=3 Ta... 224 4e-57 UniRef50_Q6AS22 Related to SUN protein (FMU protein) n=1 Tax=Des... 224 7e-57 UniRef50_B4WR53 Ribosomal RNA small subunit methyltransferase B ... 221 4e-56 UniRef50_A0LDW0 Sun protein n=2 Tax=cellular organisms RepID=A0L... 219 1e-55 UniRef50_B7KB91 Sun protein n=19 Tax=Cyanobacteria RepID=B7KB91_... 219 2e-55 UniRef50_B3E3P1 Sun protein n=4 Tax=Desulfuromonadales RepID=B3E... 216 9e-55 UniRef50_P72943 Ribosomal RNA small subunit methyltransferase B ... 216 1e-54 UniRef50_A5D1B7 tRNA and rRNA cytosine-C5-methylases n=6 Tax=Clo... 216 2e-54 UniRef50_B9M341 Sun protein n=4 Tax=Geobacter RepID=B9M341_GEOSF 215 2e-54 UniRef50_B6BVG1 Sun protein n=1 Tax=beta proteobacterium KB13 Re... 215 3e-54 UniRef50_A5GRG8 Ribosomal RNA small subunit methyltransferase B ... 213 8e-54 UniRef50_C6D4F5 Sun protein n=87 Tax=Bacilli RepID=C6D4F5_PAESJ 213 9e-54 UniRef50_Q2JK83 Ribosomal RNA small subunit methyltransferase B ... 213 1e-53 UniRef50_C5CKF6 Sun protein n=5 Tax=Betaproteobacteria RepID=C5C... 213 1e-53 UniRef50_B9QVY4 Ribosomal RNA small subunit methyltransferase B ... 212 2e-53 UniRef50_A8G3E0 Sun protein (Fmu protein) n=7 Tax=Prochlorococcu... 212 2e-53 UniRef50_C9RZP8 Sun protein n=5 Tax=Bacillales RepID=C9RZP8_GEOSY 212 2e-53 UniRef50_A0LEK0 Sun protein n=1 Tax=Syntrophobacter fumaroxidans... 212 2e-53 UniRef50_B1HQE5 Ribosomal RNA small subunit methyltransferase B ... 211 3e-53 UniRef50_A3DCX8 Sun protein n=5 Tax=Clostridium RepID=A3DCX8_CLOTH 210 9e-53 UniRef50_Q2RK22 Sun protein n=3 Tax=Clostridia RepID=Q2RK22_MOOTA 209 1e-52 UniRef50_B9XT31 Sun protein n=1 Tax=bacterium Ellin514 RepID=B9X... 209 1e-52 UniRef50_C6MTY9 Sun protein n=1 Tax=Geobacter sp. M18 RepID=C6MT... 208 3e-52 UniRef50_B2A2K5 Sun protein n=1 Tax=Natranaerobius thermophilus ... 207 4e-52 UniRef50_A8MH88 Sun protein n=7 Tax=Clostridiaceae RepID=A8MH88_... 207 7e-52 UniRef50_Q3AC21 Sun protein n=1 Tax=Carboxydothermus hydrogenofo... 207 8e-52 UniRef50_B0KA07 Sun protein n=11 Tax=Thermoanaerobacterales RepI... 206 2e-51 UniRef50_P94464 Ribosomal RNA small subunit methyltransferase B ... 205 3e-51 UniRef50_B1YIQ1 Sun protein n=2 Tax=Exiguobacterium RepID=B1YIQ1... 205 3e-51 UniRef50_A0Q113 Sun protein n=35 Tax=Clostridium RepID=A0Q113_CLONN 204 6e-51 UniRef50_D1VSE3 Ribosomal RNA small subunit methyltransferase B ... 203 8e-51 UniRef50_B0A9Y2 Putative uncharacterized protein n=2 Tax=Clostri... 202 1e-50 UniRef50_Q2LRX5 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Syn... 202 3e-50 UniRef50_B4CZF1 Sun protein n=1 Tax=Chthoniobacter flavus Ellin4... 201 4e-50 UniRef50_A6NUS8 Putative uncharacterized protein n=1 Tax=Bactero... 200 7e-50 UniRef50_Q1DCG5 Ribosomal RNA small subunit methyltransferase B ... 200 8e-50 UniRef50_Q3A7Z0 Sun protein n=2 Tax=Desulfuromonadales RepID=Q3A... 199 2e-49 UniRef50_D0MH27 Sun protein n=1 Tax=Rhodothermus marinus DSM 425... 199 2e-49 UniRef50_B8FHH2 Sun protein n=1 Tax=Desulfatibacillum alkenivora... 197 4e-49 UniRef50_B6JAF7 SUN protein n=6 Tax=Alphaproteobacteria RepID=B6... 197 8e-49 UniRef50_C4V0R0 rRNA SAM-dependent methyltransferase RmsB n=1 Ta... 196 2e-48 UniRef50_B4RCX9 rRNA methyltransferase RsmB n=8 Tax=Alphaproteob... 196 2e-48 UniRef50_Q21DD2 Fmu (Sun) n=13 Tax=Rhizobiales RepID=Q21DD2_RHOPB 195 2e-48 UniRef50_C4ZEV6 Sun protein n=4 Tax=Clostridiales RepID=C4ZEV6_E... 195 2e-48 UniRef50_Q0AKI8 Fmu (Sun) domain protein n=1 Tax=Maricaulis mari... 195 3e-48 UniRef50_Q2S463 Ribosomal RNA small subunit methyltransferase B ... 194 4e-48 UniRef50_C4FT85 Putative uncharacterized protein n=1 Tax=Catonel... 194 5e-48 UniRef50_A8SLL0 Putative uncharacterized protein n=1 Tax=Parvimo... 194 6e-48 UniRef50_C0XM65 rRNA SAM-dependent methyltransferase RmsB n=3 Ta... 194 6e-48 UniRef50_A8ZUK3 Sun protein n=1 Tax=Desulfococcus oleovorans Hxd... 194 6e-48 UniRef50_B2IXU2 Sun protein n=1 Tax=Nostoc punctiforme PCC 73102... 194 6e-48 UniRef50_B8FS79 Sun protein n=2 Tax=Desulfitobacterium hafniense... 193 1e-47 UniRef50_Q2WB24 tRNA and rRNA cytosine-C5-methylase n=3 Tax=Alph... 192 1e-47 UniRef50_UPI0001C335A0 ribosomal RNA small subunit methyltransfe... 192 2e-47 UniRef50_B8CWT0 Sun protein n=1 Tax=Halothermothrix orenii H 168... 192 2e-47 UniRef50_D0BMY2 Ribosomal RNA small subunit methyltransferase B ... 191 3e-47 UniRef50_A6BZY6 Sun protein n=1 Tax=Planctomyces maris DSM 8797 ... 191 6e-47 UniRef50_A3UKE9 RRNA methyltransferase RsmB n=1 Tax=Oceanicaulis... 190 9e-47 UniRef50_A5VKQ4 Sun protein n=14 Tax=Lactobacillus RepID=A5VKQ4_... 190 9e-47 UniRef50_C5WIG1 16S rRNA m(5)C 967 methyltransferase n=44 Tax=St... 189 2e-46 UniRef50_C8WW78 Sun protein n=2 Tax=Alicyclobacillus acidocaldar... 188 3e-46 UniRef50_UPI000174635C RsmB n=1 Tax=Verrucomicrobium spinosum DS... 187 5e-46 UniRef50_Q1NQ57 Fmu, rRNA SAM-dependent methyltransferase n=2 Ta... 187 7e-46 UniRef50_C9LLK5 Ribosomal RNA small subunit methyltransferase B ... 186 1e-45 UniRef50_C5EIZ3 Putative uncharacterized protein n=2 Tax=Clostri... 186 1e-45 UniRef50_C8R080 Sun protein n=1 Tax=Desulfurivibrio alkaliphilus... 186 1e-45 UniRef50_C0QI57 RsmB n=1 Tax=Desulfobacterium autotrophicum HRM2... 186 1e-45 UniRef50_B9K874 Sun protein n=6 Tax=Thermotogaceae RepID=B9K874_... 186 2e-45 UniRef50_Q1Q7P9 Putative uncharacterized protein n=1 Tax=Candida... 186 2e-45 UniRef50_UPI00016C38F9 Fmu, rRNA SAM-dependent methyltransferase... 186 2e-45 UniRef50_Q0F395 Sun protein n=1 Tax=Mariprofundus ferrooxydans P... 186 2e-45 UniRef50_Q03FY2 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Pedi... 185 3e-45 UniRef50_A7IBA4 Sun protein n=6 Tax=Rhizobiales RepID=A7IBA4_XANP2 185 3e-45 UniRef50_D2RNU3 Sun protein n=3 Tax=Veillonellaceae RepID=D2RNU3... 184 6e-45 UniRef50_A7VUU4 Putative uncharacterized protein n=1 Tax=Clostri... 183 1e-44 UniRef50_C0WD86 SUN protein n=1 Tax=Acidaminococcus sp. D21 RepI... 182 2e-44 UniRef50_A4XL79 Sun protein n=2 Tax=Clostridia RepID=A4XL79_CALS8 182 2e-44 UniRef50_Q2RN41 tRNA and rRNA cytosine-C5-methylase n=1 Tax=Rhod... 182 3e-44 UniRef50_A8RWU3 Putative uncharacterized protein n=4 Tax=Clostri... 181 5e-44 UniRef50_D1BMC4 Sun protein n=3 Tax=Veillonella RepID=D1BMC4_VEIPT 181 5e-44 UniRef50_Q7A601 SA1060 protein n=63 Tax=Staphylococcaceae RepID=... 181 6e-44 UniRef50_C5RAE2 RNA methyltransferase n=3 Tax=Lactobacillales Re... 180 1e-43 UniRef50_Q16CE2 RRNA methyltransferase RsmB n=15 Tax=Rhodobacter... 179 1e-43 UniRef50_C0EFK3 Putative uncharacterized protein n=1 Tax=Clostri... 179 1e-43 UniRef50_UPI0001BC65B2 16S rRNA m(5)C 967 methyltransferase n=2 ... 179 2e-43 UniRef50_C5SHX2 Sun protein n=1 Tax=Asticcacaulis excentricus CB... 179 2e-43 UniRef50_B3QZ49 Sun protein n=1 Tax=Chloroherpeton thalassium AT... 179 2e-43 UniRef50_C4G2S0 Putative uncharacterized protein n=1 Tax=Abiotro... 177 5e-43 UniRef50_Q0AXL7 Putative uncharacterized protein n=1 Tax=Syntrop... 177 6e-43 UniRef50_A3VQU7 TRNA and rRNA cytosine-C5-methylase-like protein... 177 8e-43 UniRef50_A4U1B3 Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p:Antite... 177 9e-43 UniRef50_B0MPP7 Putative uncharacterized protein n=1 Tax=Eubacte... 177 9e-43 UniRef50_Q14PA1 Putative ribosomal rna small subunit methyltrans... 177 1e-42 UniRef50_A6UED5 Fmu (Sun) domain protein n=14 Tax=Rhizobiales Re... 176 1e-42 UniRef50_A6LN58 NusB/RsmB/TIM44 n=2 Tax=Thermosipho RepID=A6LN58... 175 4e-42 UniRef50_B0VHI6 Putative 16S rRNA m5C967 methyltransferase, S-ad... 174 5e-42 UniRef50_A2BK62 tRNA and rRNA cytosine-C5-methylase n=12 Tax=Arc... 174 5e-42 UniRef50_Q2SSR7 RRNA methyltransferase RsmB (Sun protein), putat... 174 8e-42 UniRef50_C1ZLP1 Ribosomal RNA small subunit methyltransferase Rs... 174 8e-42 UniRef50_C3RII4 SUN protein n=10 Tax=Bacteria RepID=C3RII4_9MOLU 173 1e-41 UniRef50_B2UP28 Sun protein n=1 Tax=Akkermansia muciniphila ATCC... 173 1e-41 UniRef50_B1C5S4 Putative uncharacterized protein n=1 Tax=Anaerof... 173 1e-41 UniRef50_C7RGU2 Fmu (Sun) domain protein n=4 Tax=Anaerococcus Re... 172 2e-41 UniRef50_A8ST69 Putative uncharacterized protein n=2 Tax=Clostri... 172 3e-41 UniRef50_Q0G330 Putative uncharacterized protein n=5 Tax=Rhizobi... 172 3e-41 UniRef50_B0PFT6 Putative uncharacterized protein n=1 Tax=Anaerot... 169 2e-40 UniRef50_C6XRR6 Fmu (Sun) domain protein n=1 Tax=Hirschia baltic... 169 2e-40 UniRef50_B0MGA0 Putative uncharacterized protein n=2 Tax=Clostri... 168 4e-40 UniRef50_C3WQ58 16S rRNA m(5)C 967 methyltransferase n=15 Tax=Fu... 168 5e-40 UniRef50_B3WEW8 RRNA methylase (Putative) n=77 Tax=Bacilli RepID... 166 1e-39 UniRef50_Q022D6 NusB/RsmB/TIM44 n=1 Tax=Candidatus Solibacter us... 166 1e-39 UniRef50_C6QJ47 Sun protein n=1 Tax=Hyphomicrobium denitrificans... 166 1e-39 UniRef50_A7IDU9 Fmu (Sun) domain protein n=2 Tax=Xanthobacterace... 166 2e-39 UniRef50_A7C6J3 Ribosomal RNA small subunit methyltransferase B ... 166 2e-39 UniRef50_Q0BRA0 16S rRNA m(5)C 967 methyltransferase n=12 Tax=Ac... 165 2e-39 UniRef50_A9IZD6 SUN-family protein n=5 Tax=Bartonella RepID=A9IZ... 165 3e-39 UniRef50_B3EF03 Sun protein n=11 Tax=Chlorobiaceae RepID=B3EF03_... 165 3e-39 UniRef50_C5X355 Putative uncharacterized protein Sb02g027560 n=1... 164 5e-39 UniRef50_C7GZX3 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Eub... 164 5e-39 UniRef50_UPI0001BC34B4 sun protein n=1 Tax=Butyrivibrio crossotu... 164 7e-39 UniRef50_A9KM96 Sun protein n=1 Tax=Clostridium phytofermentans ... 163 1e-38 UniRef50_Q8TGZ8 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 163 1e-38 UniRef50_C0EY63 Putative uncharacterized protein n=1 Tax=Eubacte... 162 3e-38 UniRef50_D1AKD9 Fmu (Sun) domain protein n=4 Tax=Fusobacteriacea... 161 4e-38 UniRef50_Q8TGY3 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 161 4e-38 UniRef50_Q03W17 tRNA and rRNA cytosine-C5-methylase n=11 Tax=Lac... 160 6e-38 UniRef50_B9GFY0 Predicted protein n=6 Tax=Spermatophyta RepID=B9... 160 6e-38 UniRef50_C9L6W4 Ribosomal RNA small subunit methyltransferase B ... 160 8e-38 UniRef50_D0GJC1 Putative ribosomal RNA small subunit methyltrans... 160 9e-38 UniRef50_Q651X9 Os09g0477900 protein n=3 Tax=Magnoliophyta RepID... 160 1e-37 UniRef50_A5KNU7 Putative uncharacterized protein n=4 Tax=Clostri... 159 1e-37 UniRef50_Q1IIS1 Sun protein n=1 Tax=Candidatus Koribacter versat... 159 2e-37 UniRef50_D0LLT9 Sun protein n=1 Tax=Haliangium ochraceum DSM 143... 159 2e-37 UniRef50_B6W6K6 Putative uncharacterized protein n=1 Tax=Anaeroc... 158 3e-37 UniRef50_B6IQ69 tRNA and rRNA cytosine-C5-methylase, putative n=... 158 3e-37 UniRef50_D0WMY6 Ribosomal RNA small subunit methyltransferase B ... 158 3e-37 UniRef50_Q0BWV2 Putative ribosomal RNA small subunit methyltrans... 158 4e-37 UniRef50_A8RCQ7 Putative uncharacterized protein n=1 Tax=Eubacte... 158 4e-37 UniRef50_Q9LK54 Similarity to SUN and FMU proteins n=3 Tax=Embry... 158 5e-37 UniRef50_B5YF43 Ribosomal RNA small subunit methyltransferase B ... 157 5e-37 UniRef50_A8YVW1 rRNA methylase n=27 Tax=Lactobacillus RepID=A8YV... 157 5e-37 UniRef50_B5YIL4 Sun protein n=1 Tax=Thermodesulfovibrio yellowst... 157 7e-37 UniRef50_C8WDB8 Fmu (Sun) domain protein n=3 Tax=Zymomonas mobil... 157 7e-37 UniRef50_C6XFI6 Fmu (Sun) domain protein n=1 Tax=Candidatus Libe... 155 3e-36 UniRef50_A1B5L0 Fmu (Sun) domain protein n=30 Tax=Alphaproteobac... 155 4e-36 UniRef50_C2HH21 Possible rRNA SAM-dependent methyltransferase Rm... 154 4e-36 UniRef50_A6DSU1 tRNA and rRNA cytosine-C5-methylase n=1 Tax=Lent... 154 4e-36 UniRef50_A7BCC1 Putative uncharacterized protein n=1 Tax=Actinom... 153 1e-35 UniRef50_C9RK88 Fmu (Sun) domain protein n=1 Tax=Fibrobacter suc... 153 1e-35 UniRef50_B9JUI9 Sun protein n=44 Tax=Rhizobiales RepID=B9JUI9_AGRVS 152 2e-35 UniRef50_C1F543 Putative ribosomal RNA small subunit methyltrans... 152 2e-35 UniRef50_UPI0001C36EDB sun protein n=1 Tax=Ruminococcus flavefac... 152 2e-35 UniRef50_Q8SSK0 NUCLEOLAR PROTEIN (NOL1/NOP2 family) n=2 Tax=Apa... 152 2e-35 UniRef50_C7N543 tRNA/rRNA cytosine-C5-methylase n=2 Tax=Slackia ... 152 2e-35 UniRef50_D0MX46 Ribosomal RNA methyltransferase nop2-like protei... 150 8e-35 UniRef50_C7M6W6 Fmu (Sun) domain protein n=22 Tax=Bacteria RepID... 150 8e-35 UniRef50_C7LUK3 Sun protein n=1 Tax=Desulfomicrobium baculatum D... 149 1e-34 UniRef50_D2RG94 RNA methylase, NOL1/NOP2/sun family n=1 Tax=Arch... 149 2e-34 UniRef50_Q2RXU7 tRNA/rRNA cytosine-C5-methylase n=8 Tax=Alphapro... 149 3e-34 UniRef50_C1SIP0 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Denitrov... 148 3e-34 UniRef50_B9Y7F7 Putative uncharacterized protein n=1 Tax=Holdema... 148 3e-34 UniRef50_B7CB38 Putative uncharacterized protein n=1 Tax=Eubacte... 148 4e-34 UniRef50_Q8TGY2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 147 6e-34 UniRef50_C6X123 Ribosomal RNA small subunit methyltransferase B ... 147 7e-34 UniRef50_UPI0000ECD55E Putative RNA methyltransferase NOL1 (EC 2... 147 7e-34 UniRef50_A6FYF2 Ribosomal RNA small subunit methyltransferase B ... 146 1e-33 UniRef50_Q0ADT5 Fmu (Sun) domain protein n=50 Tax=Betaproteobact... 146 2e-33 UniRef50_UPI000194B9ED PREDICTED: nucleolar protein 1, 120kDa n=... 145 2e-33 UniRef50_C5NYN0 Ribosomal RNA small subunit methyltransferase B ... 145 2e-33 UniRef50_C5A6U4 SAM-dependent tRNA/rRNA cytosine-C5 methylase n=... 145 3e-33 UniRef50_C1A605 Putative rRNA methyltransferase n=1 Tax=Gemmatim... 145 3e-33 UniRef50_C7H5H8 Ribosomal RNA small subunit methyltransferase B ... 144 5e-33 UniRef50_C1TRU2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Dethiosu... 144 6e-33 UniRef50_A9LZZ8 SUN-family protein n=29 Tax=Betaproteobacteria R... 144 8e-33 UniRef50_C8NZ84 rRNA methylase n=1 Tax=Erysipelothrix rhusiopath... 144 9e-33 UniRef50_D1PM68 Ribosomal RNA small subunit methyltransferase B ... 143 1e-32 UniRef50_A0CUX2 Chromosome undetermined scaffold_29, whole genom... 143 2e-32 UniRef50_A0KI43 tRNA and rRNA cytosine-C5-methylase n=27 Tax=Gam... 142 2e-32 UniRef50_P46087 Putative ribosomal RNA methyltransferase NOP2 n=... 142 3e-32 UniRef50_A0LDB1 Fmu (Sun) domain protein n=1 Tax=Magnetococcus s... 141 4e-32 UniRef50_D1N0M6 Fmu (Sun) domain protein n=1 Tax=Victivallis vad... 140 8e-32 UniRef50_C2KVE0 Possible rRNA (Cytosine-5-)-methyltransferase n=... 140 9e-32 UniRef50_D2NSI1 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Micr... 140 9e-32 UniRef50_B6R7S3 Putative sun protein n=1 Tax=Pseudovibrio sp. JE... 140 1e-31 UniRef50_Q1MPZ7 TRNA and rRNA cytosine-C5-methylases n=1 Tax=Law... 140 1e-31 UniRef50_C0BGG9 Fmu (Sun) domain protein n=1 Tax=Flavobacteria b... 139 2e-31 UniRef50_Q8TGZ4 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 139 3e-31 UniRef50_Q1IY91 rRNA methyltransferase, sun family protein n=3 T... 139 3e-31 UniRef50_UPI00015B4FE9 PREDICTED: similar to CG8545-PA n=2 Tax=N... 138 3e-31 UniRef50_C6R1D5 Ribosomal RNA small subunit methyltransferase B ... 137 6e-31 UniRef50_B3R6E3 Ribosomal RNA small subunit methyltransferase B ... 137 9e-31 UniRef50_Q16QI0 Ribosomal RNA small subunit methyltransferase b ... 137 1e-30 UniRef50_Q11YN8 tRNA/rRNA cytosine-C5-methylase (Sun family prot... 136 1e-30 UniRef50_Q0FEH7 Ribosomal RNA small subunit methyltransferase B,... 136 2e-30 UniRef50_D2L7S0 NusB/RsmB/TIM44 n=1 Tax=Desulfovibrio sp. FW1012... 136 2e-30 >UniRef50_B2VK95 Ribosomal RNA small subunit methyltransferase B n=3 Tax=Erwinia RepID=RSMB_ERWT9 Length = 429 Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/429 (72%), Positives = 365/429 (85%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MKK NLR +AAQ +E+VVEQGQSLSN+LP Q+ V DKD ALLQELC+GVLRTL QL+W Sbjct: 1 MKKMTNLRCIAAQTIEKVVEQGQSLSNVLPAAQKSVGDKDAALLQELCYGVLRTLPQLEW 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 +I +LM+RPMTGKQR VH+LIMVGLYQL++TRIP HAALAETVEGA+A+KRPQLKGLING Sbjct: 61 VIGRLMSRPMTGKQRAVHFLIMVGLYQLMFTRIPAHAALAETVEGAVALKRPQLKGLING 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLRQFQRQQ+EL+ + N D +YLHP WLL+RL++A+P QW+ IV+ANNQRPPMWLR+NR Sbjct: 121 VLRQFQRQQDELMQQMNDGDQQYLHPKWLLERLKRAWPAQWKQIVDANNQRPPMWLRVNR 180 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 HHSRD+WL LL+E+G + F H + DA+RLE+P V LPGF+ GW+TVQD SAQGC+ Sbjct: 181 QHHSRDAWLTLLEESGKQAFAHPQHGDALRLESPCAVGQLPGFDQGWITVQDVSAQGCVA 240 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 LAP++GE ILDLCAAPGGKTTHILE AP+A+V+AVD+D QRL+RV +NL+RL M+A VK Sbjct: 241 LLAPRDGEQILDLCAAPGGKTTHILEAAPQAKVMAVDVDAQRLARVSENLQRLTMQAEVK 300 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 QGDGR P+ WCG+ QFDRILLDAPCSATGVIRRHPDIKWLRRDRDI ELA LQ +ILDA+ Sbjct: 301 QGDGRTPAAWCGDTQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAALQQQILDAV 360 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 WPHLK GGTL+YATCSVLPEEN +QI FLQR ADA L ETG QPG Q P A+ GDG Sbjct: 361 WPHLKPGGTLLYATCSVLPEENHVQIGQFLQRHADATLIETGDLTQPGIQVFPQADGGDG 420 Query: 421 FFYAKLIKK 429 F+YAKL+K+ Sbjct: 421 FYYAKLVKQ 429 >UniRef50_Q2NQQ2 Ribosomal RNA small subunit methyltransferase B n=264 Tax=Bacteria RepID=RSMB_SODGM Length = 433 Score = 594 bits (1532), Expect = e-168, Method: Compositional matrix adjust. Identities = 291/429 (67%), Positives = 338/429 (78%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK NLR +AA+AV QV++QGQSL +LPPLQ +S+KD+ALLQELCFG++R L QL+W Sbjct: 1 MKTHYNLRVIAARAVAQVLDQGQSLGALLPPLQAPLSEKDRALLQELCFGIMRVLPQLEW 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L+ +LMA+P+TGKQR VHYL+MVGLYQL YTRIPPHAALAETVEGA+A+KRPQ KGLING Sbjct: 61 LLRQLMAKPLTGKQRPVHYLLMVGLYQLTYTRIPPHAALAETVEGAVAMKRPQFKGLING 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLRQFQRQQ LLA+ D R+LHPSWL KR+ A+P Q+ I++ANNQRPPMWLR+NR Sbjct: 121 VLRQFQRQQPALLADAERQDIRHLHPSWLQKRILAAWPAQYAQIIDANNQRPPMWLRVNR 180 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 HHSRD++LALL + H+ PDA+RLE P V LPGF+ GWVTVQDASAQGC Sbjct: 181 LHHSRDAYLALLAGTDIAAVAHSQLPDAIRLEMPCNVGRLPGFDRGWVTVQDASAQGCAL 240 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 LAPQN E ILDLCAAPGGKTTHILE+AP A+V+AVD+D QR +R++DNL+RLGM+A V Sbjct: 241 LLAPQNSETILDLCAAPGGKTTHILEIAPAARVMAVDVDGQRAARIHDNLQRLGMQAEVV 300 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 GDGR P W FDRILLDAPCSATGVIRRHPDIKWLRRD DI ELA+LQ +IL A Sbjct: 301 IGDGRTPDAWRSGMLFDRILLDAPCSATGVIRRHPDIKWLRRDGDIAELAELQRQILCAA 360 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 W LK GGTL+YATCS+LPEEN QI AFL DA L ETG PG Q LP GDG Sbjct: 361 WRVLKLGGTLLYATCSILPEENRGQIAAFLADHPDALLQETGDAAAPGLQCLPVPTSGDG 420 Query: 421 FFYAKLIKK 429 FFYAK+IK+ Sbjct: 421 FFYAKMIKE 429 >UniRef50_B5FCW8 Ribosomal RNA small subunit methyltransferase B n=14 Tax=Gammaproteobacteria RepID=B5FCW8_VIBFM Length = 451 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 251/424 (59%), Positives = 318/424 (75%), Gaps = 1/424 (0%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N+R+ AA+ + QVV+QG SLS+ LP Q ++ +D+ALLQE+C+GVLR L +L+ + L Sbjct: 27 NVRAAAAKVIYQVVDQGHSLSSALPKAQSEIKPRDQALLQEICYGVLRFLPRLESVAQSL 86 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 M +P+ GKQR H+LI+VG+YQL + RIP HAA+AETVEG +K P+L+GLIN VLR + Sbjct: 87 MDKPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVAETVEGTKNLKGPKLRGLINAVLRNY 146 Query: 126 QRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QR QEEL A+ + D+ +Y HP WLLK LQ+AYPEQW++IVEANN + PMWLR+N HH+ Sbjct: 147 QRSQEELDAKSVSHDSGKYGHPGWLLKMLQQAYPEQWETIVEANNSKAPMWLRVNSQHHT 206 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD ++ALL++ + PH+ DA+ L+ V+ LPGFE GWV+VQDA+AQ +L P Sbjct: 207 RDEYIALLEKEEISVTPHSQATDALLLDKARDVYTLPGFEQGWVSVQDAAAQLSAEYLQP 266 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 QNGE ILD CAAPGGKT HILE + VVA+D DE RL RVY+NL+RL +KA V GD Sbjct: 267 QNGELILDCCAAPGGKTAHILERTQDTNVVAIDCDETRLKRVYENLERLNLKAQVICGDA 326 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R+P +W +QFDRILLDAPCSATGVIRRHPDIKWLRR DI LA+LQSEI DA+W L Sbjct: 327 RHPEEWWKGEQFDRILLDAPCSATGVIRRHPDIKWLRRAEDIKALAELQSEIFDAMWLQL 386 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYA 424 K+GGT+VYATCS+ P EN Q+KAFL RT+DA L + PE+PG+Q LPG E DGF+YA Sbjct: 387 KSGGTMVYATCSITPLENCDQVKAFLARTSDATLIDNTDPEKPGRQILPGEENMDGFYYA 446 Query: 425 KLIK 428 L K Sbjct: 447 VLQK 450 >UniRef50_Q12TA7 Sun protein n=8 Tax=Gammaproteobacteria RepID=Q12TA7_SHEDO Length = 428 Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust. Identities = 230/427 (53%), Positives = 290/427 (67%), Gaps = 7/427 (1%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLDWLINK 64 NLR++AA+A+ V+E+G SLS LP QQ V + KDKALL ELC+GV+R L QLD ++ Sbjct: 3 NLRALAAKAIFDVLEKGLSLSVALPLQQQHVQNGKDKALLAELCYGVMRQLPQLDKCVSD 62 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 +A+P GKQR +H L++VG YQL +TRIP HAA++ET E +K L ++NGVLR Sbjct: 63 CLAKPFKGKQRILHQLLLVGCYQLYFTRIPSHAAVSETAEACRQLKFDGLVKVVNGVLRN 122 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QRQ+ EL ++ +Y P+WL+KRLQ+AYP+ WQ ++E +++RPPMWLR NR + Sbjct: 123 IQRQEPEL--NTDSDTLKYNTPAWLIKRLQQAYPQDWQQVIEQSHERPPMWLRNNRLVQT 180 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD++LA L ++ PDA+ LE+P V LPGF G +VQD +AQ T LAP Sbjct: 181 RDAYLASLTNENIEASAGLS-PDAILLESPTDVLQLPGFMSGSASVQDGAAQWAATLLAP 239 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q E +LD CAAPGGKT H+LE+AP + AVD D +RL RV NL RL + A V GD Sbjct: 240 QANEVVLDACAAPGGKTCHLLEIAPNISLTAVDFDLKRLERVQQNLDRLKLTAQVIHGDA 299 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 W +FDRILLDAPCSATGVIRRHPDIKWLR++ DI ELA LQ +ILD W L Sbjct: 300 ANIDSWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKNSDIDELATLQMQILDHCWQWL 359 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC---ETGTPEQPGKQNLPGAEEGDGF 421 K GGTL+YATCS+LPEENS QI AFL RTADA L E P G Q LPG + DGF Sbjct: 360 KPGGTLLYATCSILPEENSQQINAFLTRTADASLVAISEQKNPADIGWQILPGQDNMDGF 419 Query: 422 FYAKLIK 428 +YA+L+K Sbjct: 420 YYARLVK 426 >UniRef50_Q8EKR0 Ribosomal RNA small subunit methyltransferase B n=20 Tax=Gammaproteobacteria RepID=RSMB_SHEON Length = 428 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 221/427 (51%), Positives = 285/427 (66%), Gaps = 7/427 (1%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINK 64 NLR++AA+A+ V+E+G SLS LP Q+ + S KDKALL ELC+GV+RTL Q++ + Sbjct: 2 NLRALAAKAIFDVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRTAE 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 +A+P+ GKQR +H L++VG YQL +TRIP HAA++ET E +K + ++NGVLR Sbjct: 62 CLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLRN 121 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QRQ L E + Y P WL+KRL+ AYP WQ I++ +++RPPMWLR NR S Sbjct: 122 IQRQLTPLSNE--SETLSYNTPGWLIKRLKTAYPGNWQEIIQQSHERPPMWLRNNRLSQS 179 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD +LA LD+ + DA+ L P V LP F +G +VQD +AQ T LAP Sbjct: 180 RDEYLAALDKLEIDASAGLS-DDAILLAAPKDVATLPLFLEGAASVQDGAAQWAATLLAP 238 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q E ILD CAAPGGK+ H+LE+ P +++AVD D +RL RV NL RL +KA V GD Sbjct: 239 QANELILDACAAPGGKSCHLLELEPSIKLIAVDFDAKRLERVQQNLDRLSLKAEVIHGDA 298 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 W +QFDRILLDAPCSATGVIRRHPDIKWLR++ DI ELA+LQ +ILD W L Sbjct: 299 ANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWL 358 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAE---LCETGTPEQPGKQNLPGAEEGDGF 421 K GGTL+YATCS+LP+EN QI AFL RTADA+ L + + + G Q PG DGF Sbjct: 359 KPGGTLLYATCSILPQENRDQISAFLARTADAKLDTLVQQASSQDIGWQITPGQHNMDGF 418 Query: 422 FYAKLIK 428 +YA+L+K Sbjct: 419 YYARLLK 425 >UniRef50_Q88B41 Ribosomal RNA small subunit methyltransferase B n=23 Tax=Gammaproteobacteria RepID=RSMB_PSESM Length = 448 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 206/416 (49%), Positives = 258/416 (62%), Gaps = 11/416 (2%) Query: 24 SLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMV 83 SL++ LP KV +D+ L Q+L FG R +L L KL+ +P V L++V Sbjct: 20 SLNSSLPTQLDKVELRDRGLTQDLAFGTARWQPRLSALAAKLLQKPFKAADADVEALLLV 79 Query: 84 GLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDA-R 142 GLYQL Y+RIP HAA+ ETV A +K+P KGL+N VLR QR E LL E R Sbjct: 80 GLYQLFYSRIPAHAAIGETVGCADKLKKPWAKGLLNAVLRNAQRDGEALLIELEHDPVVR 139 Query: 143 YLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPH 202 HP WL K L+ A+PEQW++I ANN PPM LR+NR H RD +L LL AG++ Sbjct: 140 TAHPRWLQKALKAAWPEQWEAICAANNAHPPMILRVNRRHQRRDQYLELLKTAGLEASAC 199 Query: 203 ADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTT 262 D + L P V +LPGF +GW++VQD +AQ L G+ +LD C APGGKT Sbjct: 200 TFSQDGIVLAEPCDVRSLPGFAEGWISVQDEAAQLAADLLELAPGQRVLDACCAPGGKTC 259 Query: 263 HILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 321 H+LEV P+ + VVAVD++ +RL RV +NL+RLG+ A + D R +QW + F RILL Sbjct: 260 HLLEVQPQLSGVVAVDLEAKRLVRVRENLERLGLDAELIAADARETAQWWDGKPFQRILL 319 Query: 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEE 381 DAPCSATGVIRRHPDIK R+ DI LA LQ E+LDA+WP L+ GG LVYATCS LP E Sbjct: 320 DAPCSATGVIRRHPDIKLTRQLDDIAALATLQGELLDALWPTLQVGGMLVYATCSTLPTE 379 Query: 382 NSLQIKAFLQRTADA-ELCETGTPEQP--------GKQNLPGAEEGDGFFYAKLIK 428 N+ I+AFL RT+ A EL G QP G+Q L DGF+YAKLIK Sbjct: 380 NTDVIEAFLARTSGARELDIAGQAGQPPAGIKQPHGRQLLAQQGGHDGFYYAKLIK 435 >UniRef50_Q88RR3 Ribosomal RNA small subunit methyltransferase B n=10 Tax=Gammaproteobacteria RepID=RSMB_PSEPK Length = 436 Score = 365 bits (936), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 209/419 (49%), Positives = 264/419 (63%), Gaps = 10/419 (2%) Query: 18 VVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV 77 V+ SL++ LP KV ++D+ L Q+L FG R +LD L +L+ +P V Sbjct: 14 VLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQLLQKPFKAADADV 73 Query: 78 HYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFN 137 L++VGLYQL YTRIP HAA+ ETV A +K+P KGL+N VLR+ QR+ EELLA Sbjct: 74 QALLLVGLYQLFYTRIPAHAAIGETVGCADKLKKPWAKGLLNAVLRRAQREGEELLAGME 133 Query: 138 ASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAG 196 R HP WL K L+ +PEQW++I ANN PPM LR+NR HHSRD++LALL EAG Sbjct: 134 RDPVVRTAHPRWLQKALKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLALLAEAG 193 Query: 197 MKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAA 256 + D + L V LPGF +GWV+VQD +AQ L G+ +LD C A Sbjct: 194 IGASACQYSRDGIVLAEACDVRGLPGFAEGWVSVQDEAAQLSADLLELAPGQRVLDACCA 253 Query: 257 PGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ 315 PGGKT H+LE A A +VA+D++ +RL+RV +NL RL + A + D R + W + Sbjct: 254 PGGKTCHLLEAEAGLANMVAIDLEAKRLTRVRENLDRLQLDAELIACDARDTASWWDGKP 313 Query: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 F RILLDAPCSATGVIRRHPDIK R+ DIP LA LQ E+LDA+WP L+ GG L+YATC Sbjct: 314 FQRILLDAPCSATGVIRRHPDIKMTRQADDIPALATLQGELLDALWPTLEVGGMLLYATC 373 Query: 376 SVLPEENSLQIKAFLQRTADAE----LCETGTPEQPGKQNLPGAEEG--DGFFYAKLIK 428 S LP EN+ IKAFL RT A E G + G+Q L A+EG DGF+YAKLIK Sbjct: 374 STLPTENTEVIKAFLARTPGARELDLATEAGLRQPHGRQLL--AQEGGHDGFYYAKLIK 430 >UniRef50_A4BK87 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BK87_9GAMM Length = 427 Score = 362 bits (929), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 195/428 (45%), Positives = 275/428 (64%), Gaps = 8/428 (1%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R +AA+ + QVV++G+SL++ LP + + +A LQ+L +G R LD LIN L Sbjct: 3 NTRLIAAEILLQVVDEGRSLNDELPRRLKHIDPDQQAFLQQLVYGSTRYYFALDELINLL 62 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + +P+ GK+R VH L+ +GLYQL + + HAA+ ETVE + K+ K L+N LR+F Sbjct: 63 VEKPIRGKERLVHMLLAIGLYQLWHLDVAEHAAINETVEATLTAKKQWAKNLVNASLRRF 122 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 QR++E +L + +++ P WL KRL++AYPEQ+ I +NQ PM LRINR +R Sbjct: 123 QRERETILPQLRRTES---FPGWLNKRLRQAYPEQFADICVQSNQPGPMTLRINRRMMTR 179 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 ++WL L + G+ P L +PAPV ALPGFEDG ++VQD +AQ C T L Sbjct: 180 EAWLLLAIKEGLVAHSTNHSPVGATLASPAPVLALPGFEDGALSVQDEAAQMCATLLPVT 239 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 +G+ +LD C+APGGKT H+LE A + ++VA+DIDE RL RV +NL+R+G+ A + D Sbjct: 240 DGQRVLDACSAPGGKTGHLLEKA-DIELVAIDIDEHRLGRVQENLERIGVSAELIAEDAA 298 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 +W FD +LLDAPCS TGVIRRHPDIK LR+ DI L+Q+QS +LD +W +K Sbjct: 299 EIERWWDGVPFDAVLLDAPCSGTGVIRRHPDIKLLRKSADIKALSQVQSRLLDRLWGTVK 358 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTADAE----LCETGTPEQPGKQNLPGAEEGDGF 421 GG L+YATCSVLP+EN+ +I AFLQ +A+ + + G Q LP ++ DGF Sbjct: 359 PGGYLLYATCSVLPDENTDRIAAFLQAHPEAQEQPLALQADVDTEHGVQWLPQSDGHDGF 418 Query: 422 FYAKLIKK 429 +YA L K+ Sbjct: 419 YYALLKKQ 426 >UniRef50_Q31J86 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31J86_THICR Length = 436 Score = 359 bits (922), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 197/432 (45%), Positives = 277/432 (64%), Gaps = 9/432 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINK 64 N R +A + V+E G+SLS L + SD+ ++A Q L G LR +L+ + + Sbjct: 4 NSRYIALKICLTVIEHGRSLSQSLAEGLAQFSDRRERAFTQNLVLGTLRWQERLEAIRSH 63 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 L+ +P+ K V+ LI++GLYQ+LY P HAA++ETV ++K+P +GLINGVLR Sbjct: 64 LLKKPLKAKDEDVNQLILLGLYQILYMDTPEHAAVSETVNLTKSLKKPWARGLINGVLRT 123 Query: 125 FQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 F R ++ + E + A RY HP W K ++ AYP+ W+ I+ ANN+ P+ LR+N + Sbjct: 124 FLRDKDSICEEVDKKPAYRYSHPQWFTKTIRNAYPDHWEQILSANNEPAPLTLRVNPLYQ 183 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 +R+++LALL + ++ H P + L+ + LP +++G +VQDA+AQ LA Sbjct: 184 TREAFLALLSDQAVEADIHPKAPQGIVLKNSLDITQLPTYDEGGFSVQDAAAQQAAYLLA 243 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 PQ E ILD CAAPGGKTTH+LE++ +A+V A++ + +R+ R+ +NL RL + A ++ G Sbjct: 244 PQPNEFILDACAAPGGKTTHLLELSDNQAKVFALEKEPERIERLSENLYRLALTAEIEVG 303 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 D P QW E QFD+ILLDAPCSATG+IRRHPDIKW R DI L QLQ+ IL AIWP Sbjct: 304 DASQPDQWWPEIQFDKILLDAPCSATGIIRRHPDIKWHRTPEDITVLTQLQAAILQAIWP 363 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-----TPEQPGKQNLPGAEE 417 LK GG L+YATCSVLP+EN QI FLQ+T DA+ G T + PG+Q LPG + Sbjct: 364 RLKPGGKLLYATCSVLPQENRDQISQFLQQTPDAKEIPIGADWGITIDAPGRQILPGQDG 423 Query: 418 GDGFFYAKLIKK 429 DGF+Y LI+K Sbjct: 424 MDGFYYC-LIEK 434 >UniRef50_B3PGY5 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Gammaproteobacteria RepID=B3PGY5_CELJU Length = 432 Score = 356 bits (914), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 203/432 (46%), Positives = 278/432 (64%), Gaps = 13/432 (3%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +R+ A Q + Q++ Q SLS++LP + K++++D+ LLQ+LCFGV R QL + L+ Sbjct: 4 VRAAATQVLAQILRQQGSLSSLLPAMSVKIAEQDRPLLQQLCFGVCRYYPQLQAYTSLLL 63 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P+ K V L+++GLYQL++TRIP HAA+ ETVE IK+ L+NGVLRQFQ Sbjct: 64 DKPLRAKDSDVQALLLLGLYQLIHTRIPDHAAIGETVEVTRDIKKAWATKLVNGVLRQFQ 123 Query: 127 RQQEELLAEFNASDARYL--HPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 R Q+ L E ASD + HP WL L+K++P+Q S++ ANN+ PP LR+N H S Sbjct: 124 RDQQTL-GEKLASDRAFSSNHPDWLEGMLRKSWPQQTDSLLAANNEHPPFTLRLNTRHMS 182 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ--GCMTWL 242 RD +LA L + P + L +LPGF G ++VQD +AQ G + L Sbjct: 183 RDDYLAQLRALDIAAGATPFSPYGITLVQACDPRSLPGFAQGLISVQDEAAQLSGDLLQL 242 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 AP G +LD C APGGKT H+LE+ P +V A+D++E+RL RV DNL RLG+ A ++ G Sbjct: 243 AP--GLRVLDACCAPGGKTGHLLEIEPRMKVTAMDVEERRLQRVRDNLGRLGVTADIRCG 300 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 DG P W + +DRILLDAPCSATG+IRRHPDIK LR +I LAQLQ ++LD++WP Sbjct: 301 DGTRPEAWWDGEPYDRILLDAPCSATGIIRRHPDIKVLRTPEEIARLAQLQGQLLDSLWP 360 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-----GTPEQPGKQNLPGAEE 417 LK GG L+YATCSV+P EN+ ++AF+QR +A C+T G + G+Q LP E Sbjct: 361 LLKPGGILLYATCSVMPRENTRVVEAFIQRQPEAR-CDTLDVPWGLLQPCGRQLLPQPEG 419 Query: 418 GDGFFYAKLIKK 429 DGF+YA+L K Sbjct: 420 HDGFYYARLRKS 431 >UniRef50_P45679 Ribosomal RNA small subunit methyltransferase B n=6 Tax=Coxiella burnetii RepID=RSMB_COXBU Length = 430 Score = 352 bits (903), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 188/432 (43%), Positives = 268/432 (62%), Gaps = 14/432 (3%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R+ A V QVV++ SL+ +L + K+++L+QELC+G LR +L + KL Sbjct: 2 NTRATTAILVNQVVQKKCSLTALL-----SANKKNQSLIQELCYGTLRWYFKLKLIAEKL 56 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + P+ K + LI+ G YQL Y IP H + +TV A +K+P KGLIN +LR+F Sbjct: 57 LHAPLRDKDHDIFCLILTGFYQLNYLNIPTHTIVNQTVGAAEILKKPWAKGLINKLLRRF 116 Query: 126 QRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 +++ELL + + +Y HP W ++ ++KA+P+ W+SI+ ANN RPPM LR+N T S Sbjct: 117 IAEKDELLTFTEKTIEGQYAHPLWFIQHIKKAWPDHWESILIANNARPPMTLRVNLTKIS 176 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 R+ +L +LD+ + P P A++LE P VH LPGF +G+ +QDA+ Q L Sbjct: 177 REIYLEMLDQKNISAKPLDFLPAAIQLEKPCSVHQLPGFNEGYCYIQDAAGQFAAYLLKL 236 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQ-VVAVDIDEQRLSRVYDNLKRLGMKATVKQ-- 301 +N + +LD CAAPG KT+HILEV P + +VA+D ++QRL+R+ +N+ RLG++ Q Sbjct: 237 ENNQTVLDACAAPGSKTSHILEVNPHLKTLVAIDNNKQRLNRIKENITRLGLRQEHLQCL 296 Query: 302 -GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 D QW + FDRILLDAPCSATGVIRRHPDIK LR+ DI + Q + ++L+A+ Sbjct: 297 LADVSQIDQWSSGELFDRILLDAPCSATGVIRRHPDIKLLRQPGDISQYHQKKLQLLNAL 356 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAE 416 W LK GG L+Y+TCSVLP+EN I+ FL EL T G + G Q LPG + Sbjct: 357 WTVLKAGGFLLYSTCSVLPDENEKVIEEFLSTHDKVELSPTNVHGGLQLKYGVQQLPGQD 416 Query: 417 EGDGFFYAKLIK 428 DGF+Y+ L K Sbjct: 417 NKDGFYYSLLFK 428 >UniRef50_A1TWM9 Sun protein n=3 Tax=Marinobacter RepID=A1TWM9_MARAV Length = 433 Score = 350 bits (899), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 194/427 (45%), Positives = 260/427 (60%), Gaps = 9/427 (2%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R++AA V VEQGQSLS LPP ++ + + LQ +C+G R +L+ +N+ + Sbjct: 8 FRAIAAN-VLLAVEQGQSLSQCLPPALNQLPPEQRPQLQAICYGTCRWFHRLEGELNQRL 66 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P+ R +H+L++V L+QL Y+ +A L ETVE A+ +P L GL+NGVLR + Sbjct: 67 KKPLRKPDRIIHHLMLVALFQLRYSEQATYAVLNETVEACRALDKPHLTGLVNGVLRAAE 126 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 R E E R+ HP+W++++L+ +P WQ+I+EANNQ+ PM LR+N RD Sbjct: 127 R---EGAPEPKDDSGRFSHPAWMVEKLRHNWPGYWQTILEANNQQAPMTLRVNALRFKRD 183 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 +L LL EAG++ P+ ++LE P PV LP FEDG +VQD +AQ C T L Q Sbjct: 184 EYLKLLSEAGIEAHATRFAPNGIQLERPVPVDRLPWFEDGAASVQDEAAQLCTTLLDLQP 243 Query: 247 GEHILDLCAAPGGKTTHILEVAPEA-QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 G+ +LD CAAPGGKT ILE +VVA+D +RL RV +NL RL + AT+ Q D Sbjct: 244 GQRVLDACAAPGGKTCAILEACGALDEVVAIDESAERLPRVQENLDRLDLHATLTQADAA 303 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 W FDRILLD PCSATGVIRRHPDIK LRR+ DI LA +Q +L+A+W LK Sbjct: 304 DIDSWWDGTPFDRILLDVPCSATGVIRRHPDIKLLRRESDIVPLASIQLGLLEAMWSILK 363 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDGF 421 GG LVYATCSV P+EN I+ FL++ A L + G G+Q P + DGF Sbjct: 364 PGGRLVYATCSVFPQENHRIIQRFLKQQNQATLKCIEADWGRDMNTGRQLFPDPDSHDGF 423 Query: 422 FYAKLIK 428 FYA L K Sbjct: 424 FYAVLEK 430 >UniRef50_Q2BQD6 Fmu, rRNA SAM-dependent methyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQD6_9GAMM Length = 432 Score = 348 bits (893), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 186/430 (43%), Positives = 271/430 (63%), Gaps = 8/430 (1%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +N+R++AAQA+ +++ SL+ P ++++ +DKD+ LL+ELC+G LR QL+ ++ Sbjct: 3 KNIRTLAAQALTPLLQNKGSLNTKYPAIERRCADKDRGLLRELCYGTLRYYPQLNRVLQL 62 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 L RP K V L +VGLYQ+ +TRIP HAA+ ETVE + +P L+N +LR+ Sbjct: 63 LQNRPFKYKDIDVRALALVGLYQIQHTRIPAHAAIHETVEACKELNKPGAAKLLNAILRR 122 Query: 125 FQRQQEELLAEFNASDAR-YLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 FQR+Q+++ +E D+ Y H W++ +L+ +P+ WQ+I+EANN++ P+ LR+NR Sbjct: 123 FQREQDDITSELKGEDSYLYNHSEWMIAKLKNNWPDHWQAILEANNEQAPLTLRVNRRSI 182 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 SR+ + L+ + P +RL V +LPG++ G +VQD +AQ L Sbjct: 183 SREEFQQQLNPV-IDSDPTVFSDQGLRLAESVNVESLPGYQVGAFSVQDEAAQLSADLLD 241 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 + + +LD CAAPGGK HILE P+ A V AV+++ +R R+ +NLKRL +KAT+ G Sbjct: 242 LKPQQRVLDACAAPGGKLCHILESEPKLASVEAVELEAKRAERIEENLKRLRLKATLHIG 301 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 D S W G+ +DRILLDAPCSATGVIRR+PDIK+LR+ DI ELAQ+QS+IL W Sbjct: 302 DASEQSWWDGD-LYDRILLDAPCSATGVIRRNPDIKFLRKGEDIHELAQIQSDILANCWA 360 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAEEG 418 LK GG L+YATCS+ P+EN QIK F+ +DA+ G + G+Q P Sbjct: 361 MLKPGGKLLYATCSIFPQENERQIKRFISNNSDAKHLAIDASWGIEREFGRQLFPEKGGH 420 Query: 419 DGFFYAKLIK 428 DGF+YA L K Sbjct: 421 DGFYYALLEK 430 >UniRef50_B8KLT3 Ribosomal RNA small subunit methyltransferase B n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KLT3_9GAMM Length = 433 Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 197/435 (45%), Positives = 264/435 (60%), Gaps = 8/435 (1%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK +R+ AA+ + +V+ +G SL L + +D+ L +E+CFG LR +LD Sbjct: 1 MKPGAAVRACAARIIAEVL-RGDSLDRALESHLTILPGRDQPLCREICFGTLRQYPRLDA 59 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L+ +L+ +P+ K R VH L + GLYQL RIP HAA++ TV+ A +K+ QL GL+N Sbjct: 60 LLGQLLQKPLRAKDRDVHALALAGLYQLTSMRIPAHAAVSATVDAATVLKKRQLSGLLNA 119 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLR+FQR++E LLA + + A HP WL L + +PE + I ANN PPM LR+N Sbjct: 120 VLRRFQREEEALLAALSDAQASA-HPDWLWNALGQHWPEHREQIARANNSYPPMTLRVNL 178 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + RDS+L L +AG+ P P A+ LE V LPGF +G +VQD +AQ Sbjct: 179 SRVDRDSYLQQLADAGITAHPGRLSPAALTLEQAVDVTLLPGFAEGLCSVQDEAAQLAAQ 238 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 LAP+ GE ILD CAAPGGK+ HILE P +A + A+DI E+RL RV +NL RLG+ AT+ Sbjct: 239 LLAPRPGERILDACAAPGGKSCHILEQLPSDASLTAMDISEERLHRVQENLDRLGLAATL 298 Query: 300 KQGDGRY-PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 GDG + P+ FD +LLD PCSATGVIRRHPD+K LRR+ D A Q IL+ Sbjct: 299 IVGDGGHPPTALVDRGPFDAMLLDVPCSATGVIRRHPDVKVLRREEDAVSFAAQQRAILN 358 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA--ELCETGTPE--QPGKQNLPG 414 +WP L GG L+Y TCS+LPEENS + FL R +DA E + + G Q LP Sbjct: 359 GLWPLLAPGGRLLYVTCSLLPEENSQAVAEFLARQSDASEEALHVASAQACAQGLQLLPD 418 Query: 415 AEEGDGFFYAKLIKK 429 DG ++A L K+ Sbjct: 419 VSGTDGLYFAMLRKR 433 >UniRef50_D1RHX8 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Legionella longbeachae D-4968 RepID=D1RHX8_LEGLO Length = 458 Score = 340 bits (871), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 186/407 (45%), Positives = 248/407 (60%), Gaps = 12/407 (2%) Query: 31 PLQQKVSDKDKA--LLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQL 88 PL Q ++ + + +E+CFG R +L + N L+ + K+ + +++G+YQL Sbjct: 52 PLSQLMASSAEVSPMTKEICFGFCRHYFRLQAIANCLIHK--KPKEIELWVALLIGIYQL 109 Query: 89 LYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYL--HP 146 Y ++P +A + ETV IK+ KGL+N VLR F RQ +E+L N D +L HP Sbjct: 110 HYMKLPDYAVVKETVALLEKIKKGWAKGLVNAVLRNFCRQHDEILTRLN-KDPLFLYGHP 168 Query: 147 SWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYP 206 WLL+RLQK +P WQ+I +AN PPM LR+N S +L +L +A + PH+ Sbjct: 169 QWLLRRLQKDWPNNWQAITKANEAHPPMTLRVNLRKISVMEYLNVLKQANITATPHSIAA 228 Query: 207 DAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE 266 +A+ LETP VH LPGF G V+VQD +AQ + L+ + G +LD C APGGKT HILE Sbjct: 229 EAIVLETPCDVHQLPGFAQGLVSVQDGAAQLATSLLSLKPGLRVLDACCAPGGKTCHILE 288 Query: 267 VAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 P A+ VAVDID +RL RV +NL RL + AT+ QGD PSQW + FDRILLDAPC Sbjct: 289 KEPHLAECVAVDIDSKRLDRVRENLNRLHLHATLLQGDASNPSQWWDGKLFDRILLDAPC 348 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 SATGVIRRH DIK LR D +I + ++Q +L ++WP L GG LVYATCSV+ EN Q Sbjct: 349 SATGVIRRHSDIKLLRNDEEIATITKIQHTMLSSLWPLLTKGGLLVYATCSVMLAENEQQ 408 Query: 386 IKAFLQRTADAELCETGTP----EQPGKQNLPGAEEGDGFFYAKLIK 428 I F++ D L P + G+Q LPG + DGFFYA L K Sbjct: 409 IANFIKNNPDCNLITKSWPWGHTTKYGQQILPGEQCMDGFFYAVLFK 455 >UniRef50_Q603G1 Sun protein n=1 Tax=Methylococcus capsulatus RepID=Q603G1_METCA Length = 431 Score = 338 bits (866), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 193/428 (45%), Positives = 265/428 (61%), Gaps = 11/428 (2%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLDWLINKLM 66 R++AA A+ VV SL+ L + D +D+A +Q LC+GVLR LD+L+ +L Sbjct: 6 RTLAAAALHDVVVDRHSLTWALGKRLPSLPDARDRAFVQSLCYGVLRAFETLDFLLGRLA 65 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P+ + + L ++GL+QL + PHAA++ETVE A ++ K L+N +LR + Sbjct: 66 TKPIRDPE--IRLLALIGLHQLRSMNVKPHAAVSETVEAAG--RKSWAKPLLNAILRNYL 121 Query: 127 RQQEELLAE-FNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R++EEL + ++R HP+WL RL +PEQW+++V+ NN PPM LR+N + R Sbjct: 122 RRKEELESRALQDPESRDAHPAWLRDRLAADWPEQWETLVQQNNLPPPMTLRVNPLMNDR 181 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 +LA L EAG+ P P + L +P PV ALPGF +G V+VQD +AQ + + Sbjct: 182 AGYLARLTEAGIAARPCRHSPWGLTLGSPVPVDALPGFAEGRVSVQDEAAQLAAPLVGAE 241 Query: 246 NGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 GE +LDLCAAPGGKT H+LE++ + + VAVD D +R +R+ +NL+R + A V GD Sbjct: 242 PGERVLDLCAAPGGKTLHMLELSRGDIEAVAVDSDAERCARIRENLERERLSAAVVTGDA 301 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R P W + FDRILLDAPCSATGVIRRHPDIK LR+ D+ L +LQ+ IL A WP L Sbjct: 302 RSPESWWDGRPFDRILLDAPCSATGVIRRHPDIKLLRQAVDLDTLNELQAAILTAAWPLL 361 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AEL---CETGTPEQPGKQNLPGAEEGDG 420 K GG LVYATCSV+ EN Q+ FL+ D AEL G P + G+Q L G DG Sbjct: 362 KPGGILVYATCSVIRAENEAQMSRFLEAHDDAAELPLPAAWGIPLRHGRQILTGESGMDG 421 Query: 421 FFYAKLIK 428 F+YA L K Sbjct: 422 FYYALLRK 429 >UniRef50_A4BP82 Fmu, rRNA SAM-dependent methyltransferase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BP82_9GAMM Length = 423 Score = 337 bits (865), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 198/422 (46%), Positives = 267/422 (63%), Gaps = 7/422 (1%) Query: 13 QAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 Q ++ V+ G++L N L + D +D+AL QELC+GVLR S+L+ L+ L+ + Sbjct: 2 QTLQDVLAHGRTLPNALADSVAALQDSRDRALCQELCYGVLRWHSRLEALVLNLLEQRPR 61 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEE 131 + R + L+ +GLYQL+YT+IPPHAA++ TV+ A A+ + G +N VLR+FQR++ Sbjct: 62 NRDRDLTLLLELGLYQLMYTQIPPHAAVSATVDTARALGKSWAAGWVNAVLRRFQRERAN 121 Query: 132 LLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 L + A R+ P WLL+ L+ +P WQS+V+A+N R P+ +RINR RD+WLA Sbjct: 122 RLQAVDLDCATRHAMPPWLLQWLRADWPSDWQSLVQASNARAPLTVRINRRRRDRDAWLA 181 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 L + G + P A+ L PV LPGF DG V+VQDA+AQ LA + + + Sbjct: 182 QLSAVSLTGAHLTELPQAIMLSRALPVTELPGFADGEVSVQDAAAQFAAMLLALRPKQRV 241 Query: 251 LDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 LD CAAPGGKTTHILE A E + A+DID QRL+RV +NL RLG++A + GD P+ W Sbjct: 242 LDACAAPGGKTTHILEQA-EVTLTALDIDAQRLTRVAENLARLGLQANLLVGDATDPASW 300 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 FDRIL+DAPCS TGVIRRHPDIKWLRR D+P LA Q +L+ +WP L +GG L Sbjct: 301 WDGLTFDRILVDAPCSGTGVIRRHPDIKWLRRPSDLPALAATQQRLLNRLWPLLSSGGRL 360 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDGFFYAKL 426 +YATCSVL EN I++FL+ DA + G Q G Q LPG + DGF+YA L Sbjct: 361 IYATCSVLRAENDAVIESFLRGHGDALVRAPDIPLGRALQFGHQILPGERDMDGFYYACL 420 Query: 427 IK 428 K Sbjct: 421 EK 422 >UniRef50_Q5ZSC6 rRNA methyltransferase (SUN protein) n=5 Tax=Gammaproteobacteria RepID=Q5ZSC6_LEGPH Length = 427 Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 189/429 (44%), Positives = 257/429 (59%), Gaps = 14/429 (3%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R A + + ++E ++LS ++ P Q++S K + C R S D LINK Sbjct: 4 NDRFNALKILTALIESRKNLSYLMSP--QEISPMTKEICYGFCRHYFRLQSIADTLINK- 60 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 RP K + ++++G+YQL Y P +A + ETV +K+ KGL+N VLR F Sbjct: 61 --RP---KDNELWIVLLIGIYQLQYMNKPDYAVVKETVSLLGQVKKSWAKGLVNAVLRNF 115 Query: 126 QRQQEELLAEFNASDAR-YLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 R+++ +L + A Y P+WLL+RLQK +P WQ I AN++ PPM LR+N HS Sbjct: 116 CRRKDHILEKLAAEPVFIYGQPNWLLQRLQKDWPNDWQFIAAANDRHPPMTLRVNVLKHS 175 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 D +L LL ++G++ F H PD + L P V LPGF G V+VQDA+ Q L+ Sbjct: 176 VDEYLDLLKKSGIEAFKHPVAPDGITLAIPCDVMTLPGFAQGSVSVQDAAPQLAAYLLSL 235 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 + G+ +LD C APGGKT HILE P A VA+D+D QRL RV DNL RL ++ATV QGD Sbjct: 236 KPGQRVLDACCAPGGKTCHILEKEPGLASCVALDLDPQRLQRVRDNLNRLDLQATVVQGD 295 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 P W FDRILLDAPCSATGVIRRH DIK LR D +I ++Q+QS +L+++WP Sbjct: 296 VLEPRSWWDGHPFDRILLDAPCSATGVIRRHSDIKLLRTDEEISAISQVQSSMLNSLWPL 355 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAEEGD 419 L GG +VYATCS++ +EN LQI F+ +D ++ + G G+Q LPG D Sbjct: 356 LAPGGLMVYATCSIMSDENELQIAQFVAEHSDCQVSDGKWSWGRWTGHGQQILPGEHSMD 415 Query: 420 GFFYAKLIK 428 GFFY+ L K Sbjct: 416 GFFYSVLRK 424 >UniRef50_C0N5F9 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5F9_9GAMM Length = 406 Score = 329 bits (844), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 176/400 (44%), Positives = 238/400 (59%), Gaps = 5/400 (1%) Query: 35 KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIP 94 +++D +++ Q+LC+GVLR L +L N+L+ +P K + L + GLYQL R P Sbjct: 7 QLNDNERSFYQQLCYGVLRLHPTLIFLGNQLLKKPFKNKDADIAALFLTGLYQLRDLRTP 66 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASD-ARYLHPSWLLKRL 153 HAA++ETV A + + GL+N LR +QRQ EL A+ + A HP WLL++ Sbjct: 67 SHAAISETVNAAKKLGKQWATGLLNACLRNYQRQHTELEAQLQHNPVAGTAHPEWLLQQY 126 Query: 154 QKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET 213 Q +P+ WQ I +ANNQ+ PM LR+NR SR+++L L + + D D V L Sbjct: 127 QSDWPDHWQQITQANNQQAPMMLRVNRQQASRETYLQQLLQQDIGATALRDCDDGVLLSK 186 Query: 214 PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQV 273 V+ALP FE G +VQD +AQ + L Q +HILD CAAPGGK+ HILE P+ + Sbjct: 187 AYDVNALPNFETGMASVQDGAAQLVVKMLDIQPDQHILDACAAPGGKSCHILEQHPDNTL 246 Query: 274 VAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRR 333 VA+DI +RL ++ NL RL + A +K D W + FDRIL+DAPCS +GVIRR Sbjct: 247 VALDISAERLKQIEQNLSRLQLGAQLKAADASDTDAWWDGELFDRILIDAPCSGSGVIRR 306 Query: 334 HPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 HPDIK LRR DI LA Q ++LD +WP LK G +VY TCS +EN QI+AFLQR Sbjct: 307 HPDIKLLRRPEDITSLAHTQQQLLDKLWPLLKADGLMVYTTCSAFKKENEQQIEAFLQRH 366 Query: 394 ADAELCET----GTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 DA+ T G Q LPG + DGF+YA L ++ Sbjct: 367 PDAKELRFEQAPATARPYGYQRLPGDDVMDGFYYACLRRR 406 >UniRef50_B5JST2 Ribosomal RNA small subunit methyltransferase B n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JST2_9GAMM Length = 431 Score = 327 bits (837), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 190/432 (43%), Positives = 256/432 (59%), Gaps = 11/432 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R A +A+ V +QGQSLS LP L + +D+ L QEL +G LR + +WL +L Sbjct: 2 NARQQALRAITSV-QQGQSLSAALPDLLAPLPKRDRGLCQELSYGSLRYYHRYEWLSQQL 60 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + +P K + ++ +GLYQL RIP HAA++ TV +K+ KG+IN VLR Sbjct: 61 LKKPFKHKDSDLQAVLALGLYQLFEMRIPDHAAVSNTVALVNGLKKSWAKGVINAVLRNA 120 Query: 126 QRQQEELLAEF-NASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 RQ++E + + A++ P WLL L+ +P+QW I EA+ +PPM LRI + + Sbjct: 121 LRQRDEWRGKIADEEAAQHSLPRWLLNFLEGNWPDQWTGIAEASLAKPPMTLRI--SGGA 178 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD + L ++ A+ + P LPGF G +VQDA+AQ L P Sbjct: 179 RDQYRQRLSALDIECHAPERADWALTITPPVDTDVLPGFAKGEASVQDAAAQWAAPLLNP 238 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q GE +LD CAAPGGKT H+LE A +VA+D++ +RL+RV NL RLG A + D Sbjct: 239 QAGERVLDACAAPGGKTGHMLEWASALDLVALDLEPKRLARVEQNLTRLGRSAELLSADL 298 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R ++W Q FDRILLDAPCSA+GVIRRHPDIK LR+ DI L +LQ++ LDA W L Sbjct: 299 RDTARWWNGQAFDRILLDAPCSASGVIRRHPDIKLLRQPEDINALVELQAQCLDAAWSTL 358 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL---CETGTP---EQPGKQNLPGAE-E 417 K GGTL+YATCS+ EN Q++ FL+R +DA L ET P G+Q PG Sbjct: 359 KEGGTLLYATCSLFKAENQHQVREFLERHSDAALDAFSETALPGIDTGYGQQFFPGGPFN 418 Query: 418 GDGFFYAKLIKK 429 GDGFFYA+L K+ Sbjct: 419 GDGFFYARLRKR 430 >UniRef50_Q2SQX3 Sun protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQX3_HAHCH Length = 447 Score = 325 bits (833), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 183/437 (41%), Positives = 256/437 (58%), Gaps = 8/437 (1%) Query: 1 MKKQRNL--RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQL 58 MK+++ L R+ AA+ + V E+G+SL+ + P ++V + D++ LQ LC+G R L Sbjct: 1 MKRRKTLSARAAAAKTLRAVAEEGRSLTTAMAPALEQVEENDRSFLQALCYGACRHYLTL 60 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLI 118 + + +L+ +P+ K+R +H+L++ GL+QL + P H ++ ETV + + L+ Sbjct: 61 EHWLGQLLRQPIKAKERDIHFLLLSGLHQLAFMDKPAHVSINETVNVTKELNKLWATKLV 120 Query: 119 NGVLRQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLR 177 NGVLR FQR+++ELLA A + RY P WLL +L AYP Q ++ A+N + P+ LR Sbjct: 121 NGVLRSFQRRKDELLARSEADPSLRYAMPRWLLDKLSAAYPHQLDELLAASNAQAPLTLR 180 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFED-GWVTVQDASAQ 236 +N R+ +L L E + V+ E V LPGF D G +VQD +AQ Sbjct: 181 VNLQKVQREDYLNQLREVEVGAHSCEWAETGVQCEHAVDVSRLPGFFDAGLCSVQDEAAQ 240 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 + + PQ E +LD C APGGKT +LE P V AVD+D +R R D L+RL ++ Sbjct: 241 LSASLVDPQPNERVLDACCAPGGKTAALLERTPTISVTAVDVDPERQLRTRDTLQRLQLE 300 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 A V+ D QW FDRILLDAPCSATGVIRRHPDIK LRR DIP+LA+LQ ++ Sbjct: 301 ADVRTADIGDLQQWWDGTPFDRILLDAPCSATGVIRRHPDIKLLRRSEDIPQLAELQLKL 360 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNL 412 L +W LK G LVYATCS+L EEN I+ F+ DAE+ + G G Q L Sbjct: 361 LRTLWTTLKPEGLLVYATCSILKEENEHIIERFIADATDAEVIPIEGKYGIQSPFGVQLL 420 Query: 413 PGAEEGDGFFYAKLIKK 429 P DGFFYA+L K+ Sbjct: 421 PVTGGHDGFFYARLRKQ 437 >UniRef50_UPI0000E0DBE4 Putative Sun protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0DBE4 Length = 442 Score = 325 bits (832), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 182/433 (42%), Positives = 256/433 (59%), Gaps = 10/433 (2%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 + LR+ AA + Q++E+G S L + +D+A LQE+ FG LRTL L + + Sbjct: 7 QQLRADAAWVLFQILEKGVSSKQALAQRLEHYQGRDRAWLQEMVFGCLRTLPTLQFWLRG 66 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 L+ +P+ G+++ + +LI++GLYQ+ Y+R+ HAA++ETV A +K LK LIN +LR Sbjct: 67 LLDKPLKGRKKILEHLILIGLYQIAYSRVSEHAAVSETVGAADLLKGTTLKALINAILRT 126 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 F R+ A + + A+ P+W+ K + Y E Q +++ +NQ+ P+WLR+N H S Sbjct: 127 FIREDVANTAPESLA-AQAGMPNWIFKAINNHYAEHAQLVIDESNQKAPLWLRVNPAHIS 185 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 + L G+ +PDAV+ V PG++ GW VQD +AQ L Sbjct: 186 PEGMQTQLQAMGIDTELKNTHPDAVQCLKSGDVTQFPGYDKGWFAVQDGAAQLAAQLLDV 245 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 Q G +LD CAAPGGKT HIL PE + VA+D D RL RV +NL RLG +AT+ Sbjct: 246 QPGHRVLDCCAAPGGKTAHILASQPELEECVAIDNDPSRLVRVEENLARLGHEATLICAA 305 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 W G + FDRILLDAPCSATGVIRRHPDI+WLR+ DI L +Q+E+L +W Sbjct: 306 AEDVEGWYGGEPFDRILLDAPCSATGVIRRHPDIRWLRQASDIAPLVAIQAELLMQMWQI 365 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADA-------ELCE-TGTPEQPGKQNLPGA 415 L+ GG L+YATCS+LPEENS QI+ F+ + +A L E T ++ G Q LPG Sbjct: 366 LQPGGKLLYATCSILPEENSQQIQTFIAQHPEAVVLPIPTSLSELTTVNDEFGLQVLPGD 425 Query: 416 EEGDGFFYAKLIK 428 + DGF+Y L K Sbjct: 426 ADMDGFYYTLLQK 438 >UniRef50_B9ZKR1 Sun protein n=2 Tax=Chromatiales RepID=B9ZKR1_9GAMM Length = 451 Score = 324 bits (830), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 193/435 (44%), Positives = 253/435 (58%), Gaps = 10/435 (2%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 R+ R A +A E VV QG SL+ + + ++ +D A +Q L + LR QL L+N Sbjct: 16 SRSPRQRALEAAEGVVLQGHSLTRAVEHATEGLNARDAAWVQALAYTTLRWYPQLSALVN 75 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + RP+ K + L+ GL +L++ HAA+ ET E A AI RP GLIN VLR Sbjct: 76 GFLERPLRKKDAVIGVLLAQGLAELMHFSTRDHAAVRETAELARAIHRPGAVGLINAVLR 135 Query: 124 QFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 + QR+Q+ L A A R+ P WLL+ ++ ++P+ W++++EA + PM LR+N + Sbjct: 136 RAQREQDALEAAVREDPALRFAVPEWLLETIRASWPDDWETLLEAATRPAPMTLRVNLSR 195 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 SR+ L L AG H A+ L+ PA V LPGF +G ++VQDASAQ L Sbjct: 196 TSREEALQALVAAGHPAQAHPQLEAALTLDEPADVAQLPGFAEGRLSVQDASAQWAAVLL 255 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 PQ GE +LD CAAPGGKT H+LE A + Q+ A+D D +RL +V +NL RLG A + Sbjct: 256 DPQPGERVLDACAAPGGKTGHLLERAGGDLQLTALDSDAERLVQVRENLDRLGFAAQLTA 315 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 D P W + FD ILLD PCSATGVIRRHPDIK LRR DIP LA Q+ IL+A W Sbjct: 316 ADVADPDAWWDGRPFDAILLDVPCSATGVIRRHPDIKTLRRADDIPRLAAEQARILEAAW 375 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE-TGTPEQPGKQ------NLP- 413 L+ GG L+YATCS+L EEN + FL+R DA E G P G LP Sbjct: 376 GLLRPGGRLLYATCSLLSEENDAVVAGFLERMPDARALEPEGGPPIAGAHARSVGWALPL 435 Query: 414 GAEEGDGFFYAKLIK 428 G E GDGF+YA L K Sbjct: 436 GLEGGDGFYYALLTK 450 >UniRef50_C7RA09 Sun protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA09_KANKD Length = 443 Score = 322 bits (826), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 187/432 (43%), Positives = 258/432 (59%), Gaps = 16/432 (3%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 LR A A+ + +G+S +++L +Q + D +L + L G R +L+ + +L+ Sbjct: 15 LRQQACLALHAIAFEGRSANDVLNSIQFE-QGSDNSLFRALVLGSCRYFIRLESIAKQLL 73 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P K + + LI++GLYQL Y+R+P HAA++ETV +K+P L+NGVLR F Sbjct: 74 QKPFKPKDQDLLCLIIIGLYQLEYSRVPDHAAISETVSVCEQLKKPWATKLVNGVLRNFV 133 Query: 127 RQQEELLAEFNAS-DARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 RQQ ELL++ +++ D R+ P WL+ L+ Y Q +S++EA NQ+ PM LR+NR R Sbjct: 134 RQQPELLSQADSNWDTRFAMPDWLISVLKPYYKGQMESLMEAINQQAPMTLRVNRQRIGR 193 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 D +L LL E G+ H A+ LE P V LP F DG+V+VQDA+AQ LAP Sbjct: 194 DQYLELLLEQGLPASTHPIATSALVLEHPVSVEQLPHFSDGYVSVQDAAAQLAAGILAPP 253 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV---KQG 302 +LD CAAPGGKT H+LE+ + A D+D +R R+ +NL RL + A + Sbjct: 254 PHSIVLDACAAPGGKTCHLLELCDSIALTACDVDHERCQRISENLLRLDLSAKLDCQDLT 313 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 D YP + FD ILLDAPCSATGVIRRHPDIK LR DI +L QLQ +IL+ +W Sbjct: 314 DSNYP-----DNHFDAILLDAPCSATGVIRRHPDIKLLRHASDIDQLVQLQQQILEHLWC 368 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG------TPEQPGKQNLPGAE 416 LK GG L+YATCS+LP+EN QI FL+R DA+L + + G Q +PG Sbjct: 369 KLKAGGRLLYATCSILPQENEQQITHFLERHKDAKLVSLSEQIQNLSHTKTGCQLIPGQL 428 Query: 417 EGDGFFYAKLIK 428 DGF+YA L K Sbjct: 429 SMDGFYYALLEK 440 >UniRef50_A8PKU4 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Rickettsiella grylli RepID=A8PKU4_9COXI Length = 442 Score = 320 bits (821), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 189/437 (43%), Positives = 268/437 (61%), Gaps = 20/437 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNIL-PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 N R +AA + + +++ +L+ IL + + +D+A +QELC+GV+R L L + Sbjct: 3 NTRRIAAHIISRFLKKKIALNTILFAEVPSGIDVRDRAFIQELCYGVIRWYFPLKKLSSF 62 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 L+ + + + ++ L++VGLYQL Y I PHAA+ ETV+ A +++ LINGVLR Sbjct: 63 LLKKSLNRSDQDIYALVLVGLYQLNYLNISPHAAVYETVQAAKELRKRWAAPLINGVLRS 122 Query: 125 FQRQQEELLAEFNASDARYL-HPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 FQRQ+ LL + S +L HP WL+K+LQ A+P W+SI++ANN M LR+N+ Sbjct: 123 FQRQKTGLLKK--VSQITHLAHPDWLIKKLQHAWPNAWRSILDANNHLASMSLRVNQLEI 180 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 +R+S+L L+ + + L+T PV LPGF G +++Q+ SAQ + L Sbjct: 181 TRESYLQKLNNNNINATLSELSQSGIILDTSFPVDKLPGFRTGEISIQNISAQLSASLLL 240 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 ++G+H+LD CAAPGGKTTHILE PE A VAVD D RL+R+ DNLKRL + Q Sbjct: 241 LEDGQHVLDACAAPGGKTTHILETQPELACCVAVDADVVRLTRLKDNLKRLKLTEKKIQ- 299 Query: 303 DGRYPSQ-------WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 +P + W G + FDRILLD+PCS TGVIR+HPDIK LRR++D+ +LA Q + Sbjct: 300 --LFPMKVQDFKIFWKG-RMFDRILLDSPCSGTGVIRKHPDIKLLRREKDVIQLADQQYQ 356 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE---LCET-GTPEQPGKQN 411 +L ++W LK GG L+Y TCSVLPEEN+ +K FL DA + ET G G+Q Sbjct: 357 LLSSLWGLLKPGGILLYVTCSVLPEENANVLKRFLTHHFDAREEVIRETWGLACPIGRQI 416 Query: 412 LPGAEEGDGFFYAKLIK 428 LP DGF+YA+L K Sbjct: 417 LPEIHGADGFYYARLRK 433 >UniRef50_D1KD39 Ribosomal RNA small subunit methyltransferase B n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KD39_9GAMM Length = 423 Score = 317 bits (811), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 174/431 (40%), Positives = 257/431 (59%), Gaps = 19/431 (4%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 + N R++A A+ VV +SLS+ + P D+D AL + L FG +R QL+ ++ Sbjct: 5 NKSNTRAVALDAICSVVLDKRSLSSFVYP------DQDDALAKSLVFGTIRFYHQLNDIV 58 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 L+ + + +H L+++G YQ+LY+++ HA++ ETV+ + + KGL+N +L Sbjct: 59 TDLLNHSLEKEDLDIHCLMLLGAYQILYSKVAIHASIFETVDTLNFLDKTWAKGLVNAIL 118 Query: 123 RQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 RQ R ++ LLA+ Y HP+WL+K++++ YP+ ++ I NN + PM +R++ Sbjct: 119 RQIDRDKDSLLAQ-----THYSHPTWLVKKIKQNYPDDFEQIFTQNNTQAPMTIRVHPKS 173 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 D +L +E ++ P A+ L+ P V+ LP FE G VQDASAQ L Sbjct: 174 SVDDYQQSLANE-NVQSNKLEITPQALILDKPMSVYDLPDFESGSCYVQDASAQLAANLL 232 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQ 301 P+N + ILD C+APGGK TH+ E+AP A +VA+D +RL RV N +R + + + Sbjct: 233 DPKNNDVILDACSAPGGKATHLCELAPNATIVALDNSSERLERVKQNTQRFNIDNIEIIK 292 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 G+ + W GE F++ILLDAPCSATGVIRRHPDIK LR+ +DI L +LQ++IL +W Sbjct: 293 GNAQQQDWWDGEL-FNKILLDAPCSATGVIRRHPDIKLLRKPKDITNLVKLQAKILANLW 351 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAEE 417 LK G L+YATCS+L EN QI FL+ DAE +T G GKQ LP + E Sbjct: 352 SMLKPDGVLLYATCSILKSENEDQITHFLESHPDAEEIKTNLDWGIDSFVGKQQLP-SHE 410 Query: 418 GDGFFYAKLIK 428 DGF+YAK+ K Sbjct: 411 FDGFYYAKIRK 421 >UniRef50_Q87AR1 Ribosomal RNA small subunit methyltransferase B n=20 Tax=Gammaproteobacteria RepID=RSMB_XYLFT Length = 431 Score = 314 bits (804), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 177/428 (41%), Positives = 254/428 (59%), Gaps = 15/428 (3%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLDWLINKLM 66 R +AA+ + VV+QG+SL L + D +D+AL++ +CF VLR + + + + Sbjct: 8 RVVAARVLALVVDQGRSLKTELAAALPTLEDVRDRALVEAICFAVLRRRPVYEAALTRWL 67 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 ARP+ + L+MVG QL ++PP+AAL+ TV+ + P +N VLR+ Q Sbjct: 68 ARPLGRGDAQLRGLLMVGFAQLDVLKVPPYAALSATVDACRVLGWPHRVSFVNAVLRRAQ 127 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 R++ +++ SDA + P WL +R++ + EQ ++I +A+ + PMWLR+N + R Sbjct: 128 RERLPVVS----SDAAW--PRWLAERIRADWGEQAEAIFDASLKPAPMWLRVNLRYGDRH 181 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 +++ L AG++ P P+A+ L+ PV LPGF+ G V+VQD SAQ L+P Sbjct: 182 TYVQRLQAAGLEAVPSGLVPEALALDCSVPVVQLPGFQGGEVSVQDLSAQQVAALLSPAP 241 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 +LD CAAPGGK H+LE AP + A+D+D QRL RV + R+ +KA + D Sbjct: 242 HARLLDACAAPGGKAAHLLERAPTLCLTALDVDMQRLRRVAETCDRIHVKARLCVADATD 301 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 + W + FD +LLDAPCSATGV+RR PD+ RR D+ L +QS +LDA W L+ Sbjct: 302 LAAWWDGEPFDAVLLDAPCSATGVVRRQPDVLLHRRAEDLLPLLNIQSRLLDACWRTLRP 361 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCET------GTPEQPGKQNLPGAEEGDG 420 GG LVY TCSVL EN Q++AFL RTADA C G P G+Q LPG + GDG Sbjct: 362 GGVLVYVTCSVLRAENQTQLEAFLARTADA--CAEDPGDAYGQPAGLGRQRLPGEQGGDG 419 Query: 421 FFYAKLIK 428 FFYA+LIK Sbjct: 420 FFYARLIK 427 >UniRef50_A3MAA2 16S rRNA m5C967 SAM-dependent methyltransferase n=18 Tax=Acinetobacter RepID=A3MAA2_ACIBT Length = 434 Score = 313 bits (803), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 176/427 (41%), Positives = 253/427 (59%), Gaps = 10/427 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 NLR+ Q + +V +QGQSL++IL +V+++D+AL EL G LR L + L Sbjct: 12 NLRAQVVQTLLKV-QQGQSLASILNTQLNQVAERDRALFHELVLGTLRQWFALKSISLPL 70 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 +++P+ + TV + VGLYQ+L TRI HAA++ETV+ + P L G++N +LR+ Sbjct: 71 LSKPLNNE--TVETCLYVGLYQVLCTRIAAHAAISETVDATKQLGFPALSGIVNAILRRA 128 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R+ E+ E A L PSWL KRL+K + EQ +++ ++ Q P+ LR+N+ H R Sbjct: 129 TRETEDF--EQGLQQAHGL-PSWLFKRLKKDWGEQTEALCQSLKQVAPLTLRVNQRHIGR 185 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 D++LA L ++ + LE + LPGFE GW +VQD AQ C T L Sbjct: 186 DAYLAKLQSLDIQARACLFSEAGIVLEQSVQITQLPGFEQGWFSVQDEHAQLCATLLPDL 245 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 N + ++D CAAPGGKT H+LE AQ++A+D D RL RV +NL RL + + + Sbjct: 246 NNKTVIDACAAPGGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHTEILAA 305 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 ++W Q D I+LDAPCSATGVIRRHPDI+ LR+ DI + +LQ +IL+ +W LK Sbjct: 306 DATKWNPVQPVDCIVLDAPCSATGVIRRHPDIRLLRQSSDIAQTIELQKQILEHMWQQLK 365 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAEEGDGF 421 GGTL+Y TCS+L EN Q+ F DA+ + G + G+Q LP A+ GDGF Sbjct: 366 VGGTLLYITCSILKSENEQQMINFFTEHPDAKEVKIEADWGIEQVHGRQLLPEAQSGDGF 425 Query: 422 FYAKLIK 428 +Y K+ K Sbjct: 426 YYCKIQK 432 >UniRef50_A6VR79 Sun protein n=2 Tax=Marinomonas RepID=A6VR79_MARMS Length = 462 Score = 311 bits (798), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 171/442 (38%), Positives = 255/442 (57%), Gaps = 17/442 (3%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 Q++ R +A + + ++ Q SLS L Q V+ + +L+ELCFGV R +L+ + Sbjct: 20 QQSARQVAIKVITNILLQQGSLSTQLARHQLDVASEHAPMLKELCFGVCRQYPRLNSIAL 79 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+A P K ++ ++++GLYQL Y P HAA+ ETVE + + L+N VLR Sbjct: 80 HLLAHPFEEKDTDLYAVLLLGLYQLTYMNTPDHAAVNETVEACRILNKDWATKLMNAVLR 139 Query: 124 QFQRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 ++QR+ ++++ A + P WL+KR K +PE + I+EA+N PPM +R+N + Sbjct: 140 RYQREADDIVEILEAQPSVEFNMPKWLVKRFNKHWPEHLEEIIEASNTHPPMCIRVNESL 199 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 SR+++ L + G+ A+ L+ V LPGF+DG+V+VQD +AQ L Sbjct: 200 VSRETYKEQLLDLGINTEKGEFSDSALYLKNAVRVGELPGFDDGYVSVQDEAAQLSAHIL 259 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEA-----QVVAVDIDEQRLSRVYDNLKRLGMKA 297 +P+ GE +LD CAAPGGKT H+LE A A ++ AV+++ R+ ++ NL+RLG A Sbjct: 260 SPKAGEKVLDACAAPGGKTGHLLEKANSAGLSSMELTAVELESWRMEKIESNLERLGYSA 319 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + D W + FD+ILLD PC+ATGVIRR+PDIK R+ DI +L +Q EIL Sbjct: 320 QLICADASDLDAWWDGEHFDKILLDVPCTATGVIRRNPDIKINRKPADIDDLVIIQREIL 379 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE-----------LCETGTPEQ 406 + +W LK+GG ++YATCS++PEEN QI+ FL DA+ E G P Sbjct: 380 NKVWTTLKSGGFMLYATCSLMPEENEQQIQHFLANQEDAKEVALNSLAADLAVEWGIPVS 439 Query: 407 PGKQNLPGAEEGDGFFYAKLIK 428 G+Q P A DGF+Y L K Sbjct: 440 HGRQLFPQANGHDGFYYCLLQK 461 >UniRef50_C6P2V1 Sun protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2V1_9PROT Length = 424 Score = 308 bits (789), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 174/423 (41%), Positives = 247/423 (58%), Gaps = 11/423 (2%) Query: 11 AAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 AA+AV +VV G++L+ +L + K++ ++K LQ+LC+G LR S+L ++++ L+ Sbjct: 8 AAKAVHKVVHGGRNLTQVLSETLRKESKLTAQEKGALQDLCYGTLRYYSRLAYMLDSLLQ 67 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 RP+ ++ + L+MV +YQL +T+ H + + V A P GL+N VLR + R Sbjct: 68 RPV--REPLLGSLLMVAIYQLEHTKAGKHVIVDQAVHAAKNTN-PAASGLVNAVLRNYLR 124 Query: 128 QQEELLAEFN-ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 +Q L N ++ Y + W + L+ Y EQ I++A N+ PPM LR+N H + Sbjct: 125 RQSVLREAANQKEESHYAYRQWWINALKAQYGEQAAEIMQAGNRHPPMTLRVNARHTTAP 184 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 + +L A PDA+ LE P PV LP F +GWV+VQDA AQ +L + Sbjct: 185 GYQTVL--AAQDIAAQIVEPDALILECPVPVEKLPKFNEGWVSVQDAGAQYAAHFLDVHD 242 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 G +LD CAAPGGKT H+LE+A + +++AVD DE RL RV +NL+RL + A V GD Sbjct: 243 GMRVLDACAAPGGKTAHLLELA-DIELLAVDKDELRLGRVRENLQRLKLDAQVVCGDAAS 301 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 P W + F+RIL D PCSA+GV+RRHPDIKWLRR DI A Q+++L+++W L + Sbjct: 302 PEDWWDGKAFERILADVPCSASGVVRRHPDIKWLRRQEDIANFAVQQAQVLESLWSLLAS 361 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 G L+YATCSV EN + FL R DA E Q LP E DGFFYA L Sbjct: 362 DGKLLYATCSVFARENQQVVAEFLARHDDASKIELSATGMIDGQLLPD-REHDGFFYALL 420 Query: 427 IKK 429 K+ Sbjct: 421 HKQ 423 >UniRef50_A1WZH2 Sun protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZH2_HALHL Length = 429 Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 175/422 (41%), Positives = 239/422 (56%), Gaps = 6/422 (1%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R A +E+V+E+G++L L +VS+++++LLQ L +G LR L++L+ + L Sbjct: 6 RVAAVHVLERVLERGETLDEALEAQFSRVSERNRSLLQALVYGALRWLTRLEAQVATLTP 65 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 R + L+++G ++ P HAA++E V+ A ++R + G++N VLR+ + Sbjct: 66 RDDWRADPLLRGLLVIGAWEAQGLATPAHAAVSEAVDAARRLRRARAAGMVNAVLRKLHK 125 Query: 128 QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 A+ ARY P WLL L++A+PE W ++ EA N PPM LR +R SR++ Sbjct: 126 ATPPGPAD---EAARYALPPWLLDHLRRAWPEDWPAVAEAGNAHPPMTLRFDRNRISREA 182 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 L L E + P P A L P PV LPGF +GW++VQD +AQ L PQ G Sbjct: 183 CLQSLAEQEIPAHPGEVAPSAATLHAPVPVARLPGFAEGWLSVQDEAAQLAAPLLDPQPG 242 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP 307 + +LD CAAPGGKT H+LE P A V A+D +RL +V DNL R G +A D P Sbjct: 243 DRVLDACAAPGGKTLHLLEHTPTAAVTALDRSSRRLRQVRDNLARGGYEAQCLAADAADP 302 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 W + F RILLDAPC+ +GVIRRHPDIKWLR D +A Q +L A+W L G Sbjct: 303 EAWWDGEPFQRILLDAPCTGSGVIRRHPDIKWLRGVDDPARMAAAQRHLLAALWRVLAPG 362 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADAE---LCETGTPEQPGKQNLPGAEEGDGFFYA 424 G L+YATCS+ PEEN + FL ADA+ L G G Q LPG DGFFYA Sbjct: 363 GRLLYATCSIFPEENEQVVAGFLAEHADAKPGPLAPVGRCTGSGCQILPGEHGMDGFFYA 422 Query: 425 KL 426 L Sbjct: 423 CL 424 >UniRef50_Q2YC21 Sun protein n=7 Tax=Betaproteobacteria RepID=Q2YC21_NITMU Length = 442 Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 181/440 (41%), Positives = 265/440 (60%), Gaps = 26/440 (5%) Query: 10 MAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +AA VE+VV G SL+ +L +SD+ + +Q+L +GVLR QLD L+ L+ Sbjct: 7 LAATTVERVVS-GASLTTVLQETWRSHSGLSDQQRGAIQDLSYGVLRFYGQLDILLGLLL 65 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIA----------IKRPQ--- 113 +P+ K +++ YL++VGLYQL Y++ PH + V + + + P+ Sbjct: 66 NKPL--KDQSLRYLLLVGLYQLQYSKTAPHVVVDSAVSASCSPSIDGRNSRNMLDPRHAK 123 Query: 114 -LKGLINGVLRQFQRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQR 171 + GL+N +LR F R++ LL + A++ RY HP W + +L+ YP ++Q+++E N R Sbjct: 124 SIGGLVNAILRNFLRKRPALLEKTAATEVGRYSHPQWWIDKLRAQYPSRYQAVLETANIR 183 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGF-PHADYPD-AVRLETPAPVHALPGFEDGWVT 229 PPM LR+N+ + +++ LL AG+ P ++ + A+ L P PV LPGF G V+ Sbjct: 184 PPMALRVNQRRTNVEAYQKLLHNAGLNARRPENEWTEEALELFHPVPVEKLPGFGQGLVS 243 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN 289 VQD +AQ L PQ+G +LD CAAPGGK+ H+LE+ + ++ AVD D +RL R+ N Sbjct: 244 VQDVAAQMAAPLLCPQSGMRVLDACAAPGGKSAHLLELT-DLELTAVDNDGERLERLKQN 302 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 RLG+K + GD +P +W + FDRIL DAPCSA+GV+RRHPDIKWLRR+ D+ + Sbjct: 303 FTRLGLKPYRIIHGDATHPGEWWDGRPFDRILADAPCSASGVVRRHPDIKWLRRESDLAQ 362 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG 408 A++Q + LDA+W L GG L+Y TCS+ EEN LQ+++FL DA L PE Sbjct: 363 FAEIQRKTLDALWQTLVKGGKLLYVTCSIFAEENGLQVESFLNHHPDARLLPFSVPEIVE 422 Query: 409 KQNLPGAEEGDGFFYAKLIK 428 Q LP DGFFYA L K Sbjct: 423 GQLLPDLHH-DGFFYALLEK 441 >UniRef50_A1AVP0 Sun protein n=1 Tax=Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) RepID=A1AVP0_RUTMC Length = 421 Score = 304 bits (778), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 170/426 (39%), Positives = 249/426 (58%), Gaps = 18/426 (4%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R +A +A+ V+ +SLS P D D L++ L FG +R QL+ +++K + Sbjct: 7 RFIALEAIYSVIINKKSLSAFNYP-----KDNDTPLIKSLVFGTIRFYHQLNDIVSKRLK 61 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 + VH L+++G YQLLY++I HA++ ETV A+ +P K L+N +LR+ R Sbjct: 62 HSFKKEDLDVHCLMLLGAYQLLYSKIAIHASIFETVNVVNALNKPWAKALVNAILRKIDR 121 Query: 128 QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 ++ L + Y HPSWL+K++++ YP +++I + NN + PM +R++ T + D Sbjct: 122 DKKILQQQ-----VHYSHPSWLVKKIKRDYPNDFETIFKQNNTQAPMTIRVH-TSLNLDH 175 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 + L + G+ A P A+ L+ V L FE G VQDASAQ + L P+N Sbjct: 176 YQQQLQQEGISSQKLAITPQALVLDKATTVFNLVKFEQGACYVQDASAQLSVPLLNPKNT 235 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP 307 + ILD C+APGGK TH+ E+AP+ +V+A+D D +RL ++ N +RL + ++ G Sbjct: 236 DLILDACSAPGGKATHLCELAPQCKVIALDNDNKRLIKISQNAQRLKI-TNIQTILGSAQ 294 Query: 308 SQ-WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 +Q W Q FD+IL DAPCSATGVIRRHPDIK LR+ +DI L LQ IL+ +W LK Sbjct: 295 NQDWWDSQLFDKILFDAPCSATGVIRRHPDIKLLRKPKDITTLVVLQKNILENLWQMLKP 354 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAEEGDGFF 422 G L+YATCS+L EN QIK FL DA+ + G G+Q LP + DGF+ Sbjct: 355 SGILLYATCSILKVENEQQIKYFLNTHYDAKEIKIELDWGINTTVGRQQLP-TDNFDGFY 413 Query: 423 YAKLIK 428 YAK+IK Sbjct: 414 YAKIIK 419 >UniRef50_C5V0U6 Sun protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0U6_9PROT Length = 421 Score = 301 bits (772), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 186/427 (43%), Positives = 255/427 (59%), Gaps = 14/427 (3%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILP-PLQQKV--SDKDKALLQELCFGVLRTLSQLDWLI 62 N++ A Q V+QV+E G++L+ +L L++K + +A LQ+L +G LR QL+ ++ Sbjct: 3 NIQLAATQIVQQVMEDGRNLNQVLDESLRRKSVWTPAQRAALQDLSYGTLRFYGQLNAIL 62 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 L+ + MT + + YL++V LYQL Y+R HA + V A I P+++GL+N +L Sbjct: 63 ELLLHKHMTDHR--ISYLLLVALYQLQYSRAAQHAVVDHAVRSA-DILNPKIRGLVNAIL 119 Query: 123 RQFQRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 R F R Q +LL + D Y HP W + L+ Y + +I+ A N PPM LR+N Sbjct: 120 RNFLRNQADLLTQAALKDEGHYSHPQWWIDELRAQYGDAADAILIAGNGHPPMTLRVNAQ 179 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 S +LA L A +A++LE P V LPGF DG V+VQDA AQ Sbjct: 180 RGSTPDYLAQL--AAQDIPARLIGAEALQLEKPVSVDKLPGFFDGLVSVQDAGAQYAARL 237 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 L + G +LD CAAPGGKT HILE A + +++A+D D RLSRV +NL+RL + A + Sbjct: 238 LDAKAGMRVLDACAAPGGKTAHILERA-DVELLALDKDAARLSRVKENLQRLTLNAALLT 296 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 GD PS W + F+RIL D PCSATGV+RRHPDIKWLRR +D+ A+ Q EIL+A+W Sbjct: 297 GDAASPSDWWDGRLFERILADVPCSATGVVRRHPDIKWLRRKKDLASFAEQQFEILNALW 356 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 P L GG L+YATCSV +EN + FL +T A+ +TG PG LP +E DGF Sbjct: 357 PLLAPGGLLLYATCSVFKQENQQVVDKFLAQTPAAQQRDTGL---PGGMLLPD-DEHDGF 412 Query: 422 FYAKLIK 428 FYA L K Sbjct: 413 FYALLQK 419 >UniRef50_A1KRE7 SUN-family protein n=32 Tax=Neisseriaceae RepID=A1KRE7_NEIMF Length = 419 Score = 300 bits (768), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 176/425 (41%), Positives = 250/425 (58%), Gaps = 20/425 (4%) Query: 10 MAAQAVEQVVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQLDWLINKLM 66 +AA ++ V E G++L ++L ++ D ++ LQ++ +G R L L ++ +++ Sbjct: 9 LAADSIAAVAE-GRNLQDVLAQIRTAHPDLTAQENGALQDIAYGCQRYLGSLKHMLAQML 67 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P+ Q + L++ LYQL YTR PHA + E VE I R Q + N +LR+F Sbjct: 68 KKPIDNPQ--LESLLLAALYQLHYTRNAPHAVVNEAVESIAKIGRGQYRSFANAILRRFL 125 Query: 127 RQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R++++L A D A++ P W + L+ YP+ W +I A PPM LR+NR H + Sbjct: 126 RERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKHWHNITAALQSHPPMTLRVNRRHGNA 185 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 +S+L L G+ +Y AV LE PV+ LPGF DG V+VQD AQ L P+ Sbjct: 186 ESYLEKLAAEGIPARALDEY--AVTLEEAVPVNRLPGFSDGIVSVQDFGAQQAAYLLNPK 243 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDG 304 +GE ILD CAAPGGKT HILE+A + +V A+DID RL RV DN+ RLG + A+ D Sbjct: 244 DGERILDACAAPGGKTGHILELA-DCRVTALDIDAGRLKRVEDNIARLGFQTASAACADA 302 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R + W + FD IL D PC+A+GV RR+PD+KWLRR D + A+ Q +LDA+W L Sbjct: 303 RDLAAWYDGKPFDAILADVPCTASGVARRNPDVKWLRRPTDALKTARQQEALLDALWQTL 362 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYA 424 K GG ++ ATCSV EEN Q++ FL R ADAE E+ + LP + DGF+YA Sbjct: 363 KQGGRMLLATCSVFVEENDGQLQKFLNRHADAEPIES-------RVLLPNKHQ-DGFYYA 414 Query: 425 KLIKK 429 LI+K Sbjct: 415 -LIQK 418 >UniRef50_A0Z2Z6 Sun protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z2Z6_9GAMM Length = 438 Score = 298 bits (762), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 171/415 (41%), Positives = 240/415 (57%), Gaps = 6/415 (1%) Query: 19 VEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVH 78 V G+SL LP + +S +++ L+QEL +G LR +L+ + +L+ +P K V Sbjct: 18 VYNGESLVRALPKGLEPLSLENRPLVQELVYGTLREWPRLEGIALQLLRKPPRAKDADVL 77 Query: 79 YLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNA 138 LI+ G++QL +P HAA+ ETVE A ++ + GLING LR +QRQ+ L + Sbjct: 78 CLILTGIHQLSGLNVPSHAAVGETVEAAKSLGKSWAAGLINGCLRNYQRQKGALEDQLTE 137 Query: 139 SDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMK 198 S + L P WL + + K +P+Q I A+ + PPM LR+N SR +++ L A + Sbjct: 138 SQSNAL-PDWLWQAICKQWPDQASEIAGASREHPPMTLRVNLQRGSRADYVSTLQNADIP 196 Query: 199 GFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPG 258 + A+ L+TP PV ++PGF +GW +VQDASAQ +L P N E I D CAAPG Sbjct: 197 VAINPHIATAITLQTPRPVSSIPGFLEGWSSVQDASAQLAAQFLQPNNDESIFDACAAPG 256 Query: 259 GKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDR 318 GKT H+LE AP+A+V+A DI +QRL + +N RL + VK D S G +QFD Sbjct: 257 GKTCHVLECAPKAKVLAADISDQRLESLQENSTRLNLPLDVKVVDATQASVTLGPRQFDA 316 Query: 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 IL D PCSATGVIRR+PDIK R+ DI Q Q +IL+ +WP +K GG L+Y TCS+L Sbjct: 317 ILADVPCSATGVIRRNPDIKITRKAADIATFHQQQRDILEGLWPLVKPGGRLLYVTCSLL 376 Query: 379 PEENSLQIKAFLQRTADAEL--CETGT---PEQPGKQNLPGAEEGDGFFYAKLIK 428 EN I+A + E+ GT + G Q LP GDG +++ L K Sbjct: 377 EAENDNVIEAAQSQLPQCEVMPLAGGTLRFNTRFGLQTLPTLNNGDGLYFSLLKK 431 >UniRef50_Q5P4P8 tRNA and rRNA cytosine-C5-methylases sun n=8 Tax=Betaproteobacteria RepID=Q5P4P8_AZOSE Length = 447 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 166/393 (42%), Positives = 238/393 (60%), Gaps = 11/393 (2%) Query: 38 DKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHA 97 D + +++L +G LR + D ++ +L+ +P+ + + + ++L + H Sbjct: 64 DATRGAVRDLAWGTLRDYGRGDVVLRRLLHKPLPVALHALLLVAL---HRLEHRPDQAHT 120 Query: 98 ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKA 156 + + V+ A A+ P LKG++NGVLR+ R + EL A A +A RY HP+W + +++ A Sbjct: 121 VVDQAVDAA-AVLAPGLKGVVNGVLRKRLRDEHELAALVEADEAARYRHPAWWVAQVRAA 179 Query: 157 YPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAP 216 +P W++ +EA NQRPPM LR+NRT S ++ A L AG+ A+ DA+ L+ P P Sbjct: 180 WPGDWEAALEAGNQRPPMALRVNRTRASVEAVEAELRNAGIGSRRLAN--DALVLDKPVP 237 Query: 217 VHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV 276 V +LPGF G V+VQDA AQ WL G+ +LD CAAPGGK HILE P ++VA+ Sbjct: 238 VASLPGFATGRVSVQDAGAQWAARWLDLAPGQRVLDACAAPGGKAAHILETKP-VELVAL 296 Query: 277 DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPD 336 ++D +R+ R+ DNL+RLG+ A V + D R W + FDRIL D PCSA+GV RRHPD Sbjct: 297 ELDPKRVQRIRDNLERLGLDAQVLRADCRALDTWWDGRPFDRILADVPCSASGVARRHPD 356 Query: 337 IKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA 396 IKWLRR D+ A Q++I+DA+WP L GG ++Y TCSV EEN+ QI R D Sbjct: 357 IKWLRRREDVRRFAAQQADIVDALWPTLAPGGRMLYVTCSVFNEENTAQIARLSARHPDL 416 Query: 397 ELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 E E + +Q LP A + DGFFYA L K+ Sbjct: 417 ERLEIDGRLE--RQLLP-ATDHDGFFYALLGKR 446 >UniRef50_A5EWM0 RRNA SAM-dependent methyltransferase, Fmu n=2 Tax=Cardiobacteriaceae RepID=A5EWM0_DICNV Length = 418 Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 175/426 (41%), Positives = 240/426 (56%), Gaps = 17/426 (3%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R AA+ + V+EQ QSL+ +LP + ++ D D+AL QEL +G LR L +L N+L+ Sbjct: 4 REAAARTLFAVIEQRQSLNQLLPAFKNQLPDIDRALYQELVYGTLREYRSLSFLHNRLLH 63 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 +P+ K ++ +G+YQLL + H + ETVE ++ P + GL N VLR+ QR Sbjct: 64 QPLD-KNPLPAIILNLGIYQLLRLTLGDHGVVHETVELCKKLRCPAVSGLTNAVLRRVQR 122 Query: 128 QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 ++ L + AR + P+WLL QK V+A RPPM +R+ R + Sbjct: 123 ERSACLQILEENKARNI-PAWLLPAYQK------DGDVDAFIMRPPMTVRV-RLPQTATQ 174 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 W+A + G + + AV V LP F G V+VQDA AQ T L P+ G Sbjct: 175 WIA---QHGANARLNPLHQQAVTFNQAIGVEDLPDFASGGVSVQDAMAQWAATLLQPRAG 231 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP 307 E ILD CAAPGGKT H+LE+AP+ ++A+D RL RV +NLKRL + A + D Sbjct: 232 ERILDACAAPGGKTGHLLELAPQCTLIALDHAADRLERVQENLKRLHLNAHCQTADAADL 291 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 + W FD ILLDAPCS +GVIRRHPDI WLR D D+ +L + Q +LD +W LK G Sbjct: 292 ASWYDGHAFDAILLDAPCSGSGVIRRHPDIAWLRSDSDLKQLPKTQYRLLDTLWQTLKIG 351 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE----QPGKQNLPGAEEGDGFFY 423 G L+Y TCS+LP EN I+ FL +A+L P+ G + P A +GDGFFY Sbjct: 352 GRLLYTTCSILPRENQQLIEQFLYTHREAQLRPITLPKGLDTGHGWLHYPDA-DGDGFFY 410 Query: 424 AKLIKK 429 A L K+ Sbjct: 411 ALLEKR 416 >UniRef50_D2UG22 Putative trna and rrna cytosine-c5-methylase protein n=1 Tax=Xanthomonas albilineans RepID=D2UG22_XANAL Length = 437 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 172/417 (41%), Positives = 245/417 (58%), Gaps = 13/417 (3%) Query: 19 VEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV 77 +++G+SL L + D +D+AL++ +CF VLR + + + + + + + Sbjct: 25 IDRGRSLKAELAAALPGLPDARDRALVEAICFAVLRRRPAYEAALRLWLQKQLPQRDAEL 84 Query: 78 HYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFN 137 L++ G QL + PHAAL+ TVE A++RP+ GL+N +LR+ R + L E Sbjct: 85 RALLLAGFAQLDVLGLAPHAALSATVEATRALERPRQAGLVNALLRRALR---DGLPEVP 141 Query: 138 ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGM 197 A DA + P WL + +PEQ ++I A+ Q P+WLR+NR +R ++L L +AG+ Sbjct: 142 A-DAGW--PLWLRDAVCADWPEQAEAIFAASQQPAPLWLRVNRQRGTRATYLQALADAGI 198 Query: 198 KGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAP 257 + DAV L P V ALPGF +GWV+VQDASAQ LAP G +LD CAAP Sbjct: 199 AAQAASALADAVCLHVPMAVSALPGFAEGWVSVQDASAQQVADVLAPAPGARVLDACAAP 258 Query: 258 GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--GMKATVKQGDGRYPSQWCGEQQ 315 GGK+ H+LE P + A+D+D +RL RV + +R+ G +A ++ D P W Sbjct: 259 GGKSAHLLERDPTLCLTALDVDARRLQRVRETFERIGSGTQARLQVADAAQPQTWWDGVP 318 Query: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 FD +LLDAPCSATG++RR PD+ RR D+ L LQ+ +LDA W L+ GG LVYATC Sbjct: 319 FDAVLLDAPCSATGIVRRQPDVLLHRRGEDLIALQALQARLLDAGWQVLRPGGVLVYATC 378 Query: 376 SVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 S+L +EN+ Q++A L R ADA L G P G+Q LPG + DGFFYA+L K Sbjct: 379 SLLQDENARQLQALLARHADAALEDPGAACGHPSGGGRQRLPGEQHADGFFYARLRK 435 >UniRef50_B7J3C2 Sun protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J3C2_ACIF2 Length = 434 Score = 276 bits (707), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 169/421 (40%), Positives = 243/421 (57%), Gaps = 15/421 (3%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 AA V + V+ GQ++ L P+ ++ D+A LQ L G LR + L KL+ +P Sbjct: 22 AAITVLRGVDSGQTVDAALLPV--SLTGTDRATLQWLVLGTLREFLSVQALSAKLLRKPW 79 Query: 71 TGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE 130 + + +L+ + L++L + + P A + + VE A+K+P +GL+N VLR++ R++E Sbjct: 80 REEDADLGFLLSLALFELRHGQRPAFAVVNDWVEMTEAVKKPWARGLMNAVLRRYLRERE 139 Query: 131 ELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 L + D HP+WL RL+ AYP+ W +I ANN PP+WLR+N ++ Sbjct: 140 VL--DTALVDRDLGHPAWLAARLRAAYPQDWPAIAAANNSAPPLWLRVNTQRVDPGAYRR 197 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 LL E G + A+ L PV LPG++ GWV VQD +AQ LAP+ GE I Sbjct: 198 LLAEQGREAEGVTWSAAALCLPASVPVATLPGWDAGWVAVQDGAAQLAAHILAPREGERI 257 Query: 251 LDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 LD CAAPGGKT H+ + ++ A+D +RL+RV + L+R G + ++ D + W Sbjct: 258 LDACAAPGGKTAHLWALGA-TRLDALDRSAERLNRVRETLERQGGEVHLQAADAAETATW 316 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 + +D ILLDAPC+ TGVIRRHPDI+ R+ D+ E Q+ +L+ +WP L+ GG L Sbjct: 317 WNGETYDAILLDAPCTGTGVIRRHPDIRLRRQPEDVAEAVAQQARLLEGLWPCLRPGGRL 376 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAELCE---TGTPEQPGKQNLPGAEEGDGFFYAKLI 427 +YATCSVLPEEN QI AF+QR +DA TG Q LPG E+ DGF+YA L Sbjct: 377 LYATCSVLPEENEEQIAAFVQRHSDARRMAHPLTG-------QRLPGQEDMDGFYYALLE 429 Query: 428 K 428 K Sbjct: 430 K 430 >UniRef50_Q0VTE3 tRNA and rRNA cytosine-C5-methylase, putative n=2 Tax=Alcanivorax RepID=Q0VTE3_ALCBS Length = 447 Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 168/430 (39%), Positives = 236/430 (54%), Gaps = 14/430 (3%) Query: 8 RSMAAQAVEQVVE---QGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R A +A+ +V+ G+SL +L + SD + ++++CFGV R L L+ +N+ Sbjct: 17 RLSAVRALNRVLPGKGDGESLREVLRDFPLQGSDGGQ--MRDICFGVCRHLRPLNHWLNQ 74 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 +++P+ G + V ++ GLY+L ++ P HA + + +K P GL N VLR+ Sbjct: 75 QLSKPLKGSAQPVRLALLAGLYELWFSNRPAHAIVNAYPQLCRKLKAPWAAGLSNAVLRK 134 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 + E + + P WL KR +K +P ++ AN Q PP LR+NR Sbjct: 135 ASQITLEQAVADAPINIQLSLPDWLFKRWEKDWPNNADAMARANLQTPPFTLRVNRQQQQ 194 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL-A 243 R +A L E G+ P ++ L+ PV LPGFE G ++VQD +AQ L A Sbjct: 195 RADAIAALGEGARAGY---IAPYSIYLQPARPVLQLPGFEQGALSVQDEAAQLPAELLQA 251 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 P G ILD CAAPGGKT + E P A + A++++ +RL+R+ +NL RLG T+ QGD Sbjct: 252 PAKG-RILDACAAPGGKTGQLREKFPAADLSALELEGKRLARIRENLARLGTDVTLLQGD 310 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 P W FD ILLDAPCSATG++RR PD+KW R+ DI L LQ+ +LDA+WP Sbjct: 311 ASDPKTWWDGTPFDAILLDAPCSATGILRRQPDVKWHRKASDIGVLVDLQARMLDALWPL 370 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEEGD 419 LK GG LVYATCSVL +EN Q++ FLQR A E T G Q P D Sbjct: 371 LKPGGMLVYATCSVLRDENDHQVRNFLQRQPQARDVTPRPEGATMVDAGWQLFPEQHGPD 430 Query: 420 GFFYAKLIKK 429 GF+ A L K+ Sbjct: 431 GFYLACLRKE 440 >UniRef50_C7I4U3 Sun protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I4U3_THIIN Length = 457 Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 183/449 (40%), Positives = 243/449 (54%), Gaps = 32/449 (7%) Query: 4 QRNLRS--MAAQAVEQVVEQGQSLSNILP--PLQQKVSDKDKALLQELCFGVLRTLSQLD 59 QR LR +A + V+ G SLS LP + K + Q L F VLR L + Sbjct: 15 QRPLRRDLIACAQLIGAVQAGASLSTALPQAATRGKWDASQRGAAQALSFAVLRHLGTVR 74 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQ----LLYTRIPPHAALAETVEGAI-AIKR-PQ 113 L+ L +P +H ++ + Q LL P H A V A+ A KR P Sbjct: 75 ALLTDLQPKP-------IHPPLLRDVLQTALALLLPDAPAHYAAHTVVNQAVEACKRTPS 127 Query: 114 LK---GLINGVLRQFQRQQEELLA-EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANN 169 L+ G N +LR+F + ++ A +AR+ HP W ++ LQ AYP WQ ++E Sbjct: 128 LRHAQGFANALLRRFVSRTADIEAVRMRTLEARWNHPDWWVQALQSAYPADWQGVLEVAQ 187 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD--YPDAVRLETPAPVHALPGFEDGW 227 ++P M LR+N SR ++ A L G+ D A+ L+ V LPGFE GW Sbjct: 188 RQPAMTLRVNPRLQSRTAYQAALAACGLPCTAPDDPLLDQALILKQAVAVERLPGFERGW 247 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVY 287 V+VQDA+AQ L Q G+ +LD CAAPGGKT H+LE + ++A+D D QRL RV Sbjct: 248 VSVQDAAAQYAAALLDVQPGQRVLDACAAPGGKTAHLLERC-DCDLLALDKDAQRLRRVE 306 Query: 288 DNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 D L RLG++A D +P+ W Q FDRILLDAPCSA+G+ RRHPDI+WLRR DIP Sbjct: 307 DTLDRLGLQARTLAADAAHPATWWDGQPFDRILLDAPCSASGIARRHPDIRWLRRAADIP 366 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG---TP 404 LA Q+ +LDA+WP L+ GG L+Y TCSV P+E Q +AFL R ADA P Sbjct: 367 ALAATQAVLLDALWPLLRPGGKLLYVTCSVFPQEGVEQARAFLARHADAIASPAPGQLLP 426 Query: 405 EQPG---KQNLPGA--EEGDGFFYAKLIK 428 ++P ++ PGA DGFFYA K Sbjct: 427 QEPAFDQTRDDPGAARHSQDGFFYALFTK 455 >UniRef50_B3R820 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent n=2 Tax=Cupriavidus RepID=B3R820_CUPTR Length = 477 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 148/340 (43%), Positives = 198/340 (58%), Gaps = 23/340 (6%) Query: 110 KRPQLKGLINGVLRQFQRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEAN 168 K +GL+N VLR+F R+++ LLAE N + AR+ P W L+ L++AYP+QW ++ + Sbjct: 140 KTAHARGLVNAVLRRFLRERKALLAEVNRDEQARWNLPPWWLRLLREAYPDQWMALAASA 199 Query: 169 NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWV 228 N RPPM +R+N S + L AG+ G H P AVRL PV+ LPGF +G V Sbjct: 200 NVRPPMTVRVNTARVSVPQYRTDLANAGLAG--HVVGPQAVRLVRAVPVNQLPGFAEGVV 257 Query: 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYD 288 +VQDA AQ L +G +LD CAAPGGKT H+LE+A + +V AV+ D QR +R+ + Sbjct: 258 SVQDAGAQLAAPLLEVADGMRVLDACAAPGGKTGHLLELA-DIEVTAVESDPQRATRIGE 316 Query: 289 NLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 NL RLG A + GD P+ W Q FDRIL D PCSA+G++RRHPDI+WLRR+ DI Sbjct: 317 NLARLGKSAKIVVGDASRPADWWDGQPFDRILADVPCSASGIVRRHPDIRWLRRETDIAR 376 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG 408 L Q I+ +WP LK GG LVY TCS+ P E Q + F ++ ADA + PG Sbjct: 377 LITEQRRIVSQLWPLLKPGGILVYVTCSIFPTEGEEQARWFGEQLADAIRLQAPGQLLPG 436 Query: 409 ------------KQNLPGAEEG-------DGFFYAKLIKK 429 K L + +G DGFFYA+ K+ Sbjct: 437 THATLAAGADGDKATLDSSTDGTSLPSDHDGFFYARFQKR 476 >UniRef50_D0KVS1 Sun protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVS1_HALNC Length = 437 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 173/435 (39%), Positives = 235/435 (54%), Gaps = 19/435 (4%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 ++ AQ + VV QG SL L + + + L+Q + + VLR L + + L+ R Sbjct: 8 ALTAQLLLSVVGQGVSLDAALGRVLSQAQPVHRGLVQAMGYEVLRHYEALVFWRDSLLER 67 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 P+ K + L++VGL ++ R ++ V+ A + P GL+N VLR+ RQ Sbjct: 68 PIPAKSAIIALLLLVGLERIRGARREASRSVNSAVQAARELGHPWATGLLNAVLRRAVRQ 127 Query: 129 QEELLAEF----NASDARYLHPSWLLKRLQKAYPEQWQSIV-EANNQRPPMWLRINRTHH 183 EE + F +A+ AR P WL L + E S + A PPM LR+ Sbjct: 128 IEEGVDPFAQAPSAAGARL--PQWLFDALTVDWGEARASALGSALATHPPMTLRVA---G 182 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 R ++ L ++ P A + L P V LPGF +G V+VQD +AQ + L Sbjct: 183 DRAAYGEQLSSIEIEANPTAFSTRGLNLVHPMDVDRLPGFAEGQVSVQDEAAQWVVDLLD 242 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 G+H+LD C+APGGKT +L+ PE+ V AVDID R++RV +NL+R + A + GD Sbjct: 243 LAPGQHVLDACSAPGGKTLAMLQHQPESNVTAVDIDTTRMARVQENLERGQVFARLIVGD 302 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 P W Q FDRIL D PCSATGVIRRHPDIK LRR D+P L + Q+ ILDA+W Sbjct: 303 AGAPQDWWDGQPFDRILADVPCSATGVIRRHPDIKRLRRPEDLPVLVERQAVILDALWSL 362 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQP-----GKQNLPG 414 LK GG +VYATCS+L ENS Q+ AFL+R DA + G P Q G+Q P Sbjct: 363 LKPGGRMVYATCSILDRENSAQVAAFLRRHGDARALPLSVDWGEPRQIDGQFLGQQVFPV 422 Query: 415 AEEGDGFFYAKLIKK 429 +E DGFFYA L K Sbjct: 423 SEGHDGFFYAVLEKN 437 >UniRef50_C0AZZ3 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AZZ3_9ENTR Length = 194 Score = 259 bits (663), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 120/172 (69%), Positives = 147/172 (85%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK NLRS+AA+A+ QV++QG SLS ++P LQ+ +SDKDKALLQE+CFGVLRTL QL+W Sbjct: 1 MKTSYNLRSIAAKAINQVLDQGLSLSTVIPELQKNISDKDKALLQEICFGVLRTLPQLEW 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 +I +LM +P+ GKQR +HYLIMVGLYQLLYTRIP HAALAETV GA+A+K+PQLKGLING Sbjct: 61 IIQQLMDKPLKGKQRILHYLIMVGLYQLLYTRIPAHAALAETVNGAVALKKPQLKGLING 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRP 172 VLRQFQRQQ+ L F S+ R+LHPSWLL R++KAYPEQW +I+E NNQ+P Sbjct: 121 VLRQFQRQQDILNERFQNSENRFLHPSWLLARIKKAYPEQWMNIIEGNNQKP 172 >UniRef50_C6NTF2 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTF2_9GAMM Length = 443 Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 146/336 (43%), Positives = 197/336 (58%), Gaps = 8/336 (2%) Query: 94 PPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRL 153 P A + + V + + +GL+N +LR++ R++E L E DA + HP WL++RL Sbjct: 91 PDFAVVNDWVGACALLHKEWARGLVNALLRRYLREREPL--EEQIRDAHWNHPQWLVRRL 148 Query: 154 QKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET 213 Q+ YP QW I+ AN + P+WLR+N + ++ L EA + HA P+A+RL+T Sbjct: 149 QQVYPTQWPDILAANLREAPLWLRVNPQAITPAAYAERLAEASLPAQSHAGLPEALRLDT 208 Query: 214 PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQV 273 PV ALPG+E GWV++QD +AQ LAP+ E +LD CAAPGGKTTH+L Q+ Sbjct: 209 AVPVRALPGWERGWVSIQDGAAQRAAHILAPRPDERVLDACAAPGGKTTHLLSFGVR-QL 267 Query: 274 VAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIR 332 A+D + RL R+ L+RL + ++ D W FD ILLDAPC+A+GVIR Sbjct: 268 TALDRSQARLERLRRELQRLQLPLPSLHVADAADVDAWWDGMVFDAILLDAPCTASGVIR 327 Query: 333 RHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 RHPDI RR+ D+ + Q +L A+W LK GG L+Y TCSVLPEEN QI +FL+ Sbjct: 328 RHPDILLRRREDDVERVRHEQRRLLAALWRVLKPGGRLLYCTCSVLPEENGEQIASFLEE 387 Query: 393 TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 DA P Q LPG E DGFFYA L K Sbjct: 388 HDDAR----ALPHPQCGQRLPGEEGMDGFFYALLGK 419 >UniRef50_Q2T2A8 Sun protein n=76 Tax=Proteobacteria RepID=Q2T2A8_BURTA Length = 571 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 160/445 (35%), Positives = 237/445 (53%), Gaps = 38/445 (8%) Query: 11 AAQAVEQVVE---QGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 AAQAV+ V +L+ + L + +Q++ + +R DWLI +L+A Sbjct: 139 AAQAVDAVTRGAALPAALAAVHATLPANARAASRGAIQDIAYRAMRRRGTADWLIAQLVA 198 Query: 68 RPMTGKQRTVHYLIMVGLYQLL----YTRIPPHAALAETVEGAIAIKR--PQLKGLINGV 121 + VH L++ L+ + P + + V AI +R KGL+N V Sbjct: 199 KAPPAH---VHALLVCAFALLVDDDEHAAYAPFTVVDQAVT-AIGARRECSFAKGLVNAV 254 Query: 122 LRQFQRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 LR+F R++ L + AR+ + W + +++A+P+ W I+ + + P+ LR+N Sbjct: 255 LRRFLRERAVWLERLQSDRRARWNYEPWWIDAVERAWPDAWPRILASGDAPGPLTLRVNA 314 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + D++L +L + + A+RL + PV +PGF DG V+VQDA AQ Sbjct: 315 RRMTADAYLDVLRAERIDAEKVGRH--AIRLASALPVERIPGFADGIVSVQDAGAQLAAE 372 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 WL ++G +LD CAAPGGKT HILE+A A+VVA++ D R R+ +NL RL + A V+ Sbjct: 373 WLGARDGMRVLDACAAPGGKTGHILELA-HAEVVALESDPARAPRIGENLARLSLAADVR 431 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 GD PSQW + FDR+L D PCSA+G++RRHPDI+WLRR DIP L Q IL A+ Sbjct: 432 VGDAGDPSQWHDGRAFDRVLADVPCSASGIVRRHPDIRWLRRAADIPALVAEQRRILSAL 491 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----------------GTP 404 WP +K GG L+YATCS+ PEE LQ + F DA + G Sbjct: 492 WPLVKPGGELLYATCSIFPEEGELQARWFGDACQDAVRLDAPGQLLPQGATGGAPAAGGS 551 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIKK 429 ++PG+ + DGFFYA+ K+ Sbjct: 552 DEPGRH-----VDHDGFFYARFQKR 571 >UniRef50_A1WK57 Sun protein n=17 Tax=cellular organisms RepID=A1WK57_VEREI Length = 470 Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 170/434 (39%), Positives = 233/434 (53%), Gaps = 31/434 (7%) Query: 17 QVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRT 76 Q + GQS + +L + + +ALL F VLR + + L +L AR Sbjct: 43 QAIRSGQSGTAVLAAVDADLRPGVQALL----FQVLRQAGRAELLRRQLAAR---TPPPA 95 Query: 77 VHYLIMVGLYQLLYTRIPPHAALA---ETVEGAIAIKRPQLK-GLINGVLRQFQRQQEEL 132 V L+ V L P+A + VE A + + IN LR+F R++E L Sbjct: 96 VDALLCVALALCWNPEDAPYAPFTLVNQAVEAAKHSAAARAQSAFINACLRRFLREREAL 155 Query: 133 LAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLAL 191 LA + AR+ HP W +++L++ +P WQ I++ANN+ PM LR+N+ S +L Sbjct: 156 LAATDDDPLARWNHPRWWIRQLRQDHPRHWQQILQANNRHAPMVLRVNQRKCSLAQYLRA 215 Query: 192 LDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC----MTWLAPQNG 247 LD M+ AD A+R P PV ALPGF GWV+VQDA+AQ + L + Sbjct: 216 LDAIDMQATVVADMGLALR--QPVPVQALPGFAQGWVSVQDAAAQKAAPLLLQGLDLRQP 273 Query: 248 EHILDLCAAPGGKTTHILEVA---PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 +LD CAAPGGKT H+LE+A QV A++ID R +R+ +L+RLG+ A V D Sbjct: 274 LRVLDACAAPGGKTAHLLELAGADAPLQVTALEIDATRSARIDASLQRLGLGAQVLVADA 333 Query: 305 RYPSQW----CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 P W CG FD ILLDAPCSA+G++RRHPD++WLRR DI LA LQ+ +L A+ Sbjct: 334 TRPQDWWQPHCGGAPFDAILLDAPCSASGIVRRHPDVRWLRRATDIAPLAALQARLLRAL 393 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGA----- 415 WP L+ GG L+Y +CSV E ++AFL DA L + PG + GA Sbjct: 394 WPLLRPGGRLLYCSCSVFRAEGDAPVQAFLAHHTDARLLPSPGHLLPGNADKDGAVPDNA 453 Query: 416 -EEGDGFFYAKLIK 428 + DGFFYA L K Sbjct: 454 GGDHDGFFYALLHK 467 >UniRef50_B2SFT3 tRNA and rRNA cytosine-C5-methylase, sun protein n=17 Tax=Francisella RepID=B2SFT3_FRATM Length = 426 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 153/431 (35%), Positives = 237/431 (54%), Gaps = 17/431 (3%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQ-KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 N R++AA+ + +++ SL I L + + ++DK+ ++ LC+ R L+ K Sbjct: 2 NTRAIAAKTILDILDNKYSLLTIEQKLVKLNLLEQDKSFIKLLCYEFFRHYYSLE----K 57 Query: 65 LMARPMTGKQRT-VHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 ++A +T K + LIM+G Q+ + P +A + ETV +K K L+N +LR Sbjct: 58 IIALYLTQKTKVKAKVLIMLGALQIFEIKQPYYATINETVAACKVLKIIWAKKLVNRILR 117 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 + R E++ + + + A + P WL L+K YP I +A N + M++R+N+ Sbjct: 118 EMTRNIEDITSIYTQNKAIDM-PEWLCDTLKKQYPNDHLVIAQAINAKADMFIRLNQNKD 176 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 ++ L D+ + G+ + D ++L+ V F+ G+ T+QD SAQ + Sbjct: 177 NK-KVLDYFDKNNI-GYSFTNLKDCIKLDQAIDVKYNQPFQQGYFTIQDISAQYAGHIIK 234 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 N + ILD CAAPGGKT+HILE AP+A + A+DI ++RL + +NL+RL V Sbjct: 235 AANNDKILDACAAPGGKTSHILECAPQADITAIDIIDKRLELLRENLERLSENHNVNVFK 294 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW-P 362 G +F++I+LDAPCSA G IRR+PDIK LR DI + LQS+IL +W Sbjct: 295 HDLTLPLAG--KFNKIILDAPCSALGTIRRNPDIKVLRTPNDIQAIKSLQSKILANLWNN 352 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ----PGKQNLPGAEEG 418 +L G L+Y TCS+L EEN QIK FL + +AE+ E E+ G Q LP ++G Sbjct: 353 NLTDNGYLLYITCSILAEENQQQIKEFLAKNNNAEIIEIDILEKYKTSYGYQLLPSQQDG 412 Query: 419 DGFFYAKLIKK 429 DGF+Y L+KK Sbjct: 413 DGFYYC-LLKK 422 >UniRef50_UPI0000E87C3C sun; rRNA methylase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C3C Length = 423 Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 142/423 (33%), Positives = 233/423 (55%), Gaps = 11/423 (2%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINKLMARP 69 AA ++ V++ G +L ++ + + D ++ ++ + +G LR + Q ++LI KL+ Sbjct: 8 AAIIIDGVLD-GNNLDHVFEKILKNPDDSVQQSQVKAITYGTLRYMGQSNYLIGKLIKNK 66 Query: 70 MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ 129 + + R + LI V +YQL + + V A I + L+N VLR F R + Sbjct: 67 I--ENRVLESLIHVAIYQLTQEAHTDFTVVDQAVRAAKKIDFRK-SNLVNAVLRTFLRNK 123 Query: 130 EELLAEFNA-SDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSW 188 E+L+ F S+++Y +P W + ++++ Y E W+ ++ N PPM +R+N+ + + + Sbjct: 124 EKLIQGFAGQSESKYNYPLWWVDKMKEQYVEHWEDVLRIGNVHPPMTIRVNKKKITVEKY 183 Query: 189 LALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGE 248 +L + + +A+ ++TP V +PGF +G+ +VQD AQ +L ++G Sbjct: 184 SDILRSNNINHV--LIHGNALIIDTPINVMDVPGFVEGYFSVQDYGAQLASEYLDLEDGH 241 Query: 249 HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS 308 +LD CAAPGGKTT ILE + + ++V+++ + R R+ +NL RLG++A V + + Sbjct: 242 WVLDACAAPGGKTTSILE-SHDVRLVSLEKNPLRALRIEENLLRLGLQAKVIKEPLDNDN 300 Query: 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGG 368 +W Q FDRILLD PCSA+G++RRH DIKWLRR D + Q E+L+ WP LK G Sbjct: 301 KWWDRQAFDRILLDVPCSASGIVRRHIDIKWLRRPSDFVNYGKSQLELLNNAWPLLKKNG 360 Query: 369 TLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ--PGKQNLPGAEEGDGFFYAKL 426 L+Y TCSV EEN I AF + DA + PE K + ++ DG +Y L Sbjct: 361 KLLYVTCSVFQEENCDVIAAFCENHKDAIRGDIKFPEHVVSMKNQMLPSKHHDGLYYEIL 420 Query: 427 IKK 429 K Sbjct: 421 EKN 423 >UniRef50_C8PZ41 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZ41_9GAMM Length = 450 Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 163/453 (35%), Positives = 243/453 (53%), Gaps = 31/453 (6%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 + Q N R+ +E++ +QG+SLS++L PL +VS+KDK EL G LR L Sbjct: 4 LHSQLNTRAKVVATLERI-QQGESLSSLLDPLLNQVSEKDKGFAHELLLGTLRQWWALAR 62 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 + L+ +T K V + +GLYQLLY P +AA+ ETVE + + GLIN Sbjct: 63 IGESLIEHEVTDK--GVWAALNIGLYQLLYMDTPDYAAIGETVEAVKQLDKGYGAGLINA 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 +LR+ Q+ + + + + P+WL K+L++ + E + + +A Q P++LR+NR Sbjct: 121 ILRKVQKNPAKFAKKIEKNHSL---PNWLAKQLKQDWGEYYAELGQALRQPAPIFLRVNR 177 Query: 181 THHSRDSWLALLDEAGMKGFPHA----DYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 S + + +L + G+ GF + ++L + LP F +GWV+VQD AQ Sbjct: 178 KFCSVEDYADILTQQGI-GFALVSIGFEKVQTIQLTDAIRITDLPKFAEGWVSVQDRHAQ 236 Query: 237 ---GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE----------AQVVAVDIDEQRL 283 + LA +LD C APGGK H+LE+ A V+A+D DE+RL Sbjct: 237 LSAHILASLALDKSLTVLDACTAPGGKLAHLLELDESKTFHVKHQNIAHVIALDNDEKRL 296 Query: 284 SRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 RV NL+RL + Q + + + QFD I+LDAPC+ATGVIRRHPDI LR + Sbjct: 297 QRVSQNLERLQLNQENVQLVCDDATTFQADTQFDVIVLDAPCTATGVIRRHPDIALLRTE 356 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG- 402 +D+ + A LQ+ IL W +L T G L+Y TCS+L EN Q++AFL A++ + Sbjct: 357 QDVGQTAALQARILANCWHNLATNGYLLYITCSMLKAENENQLQAFLATHKAAQIVDFSL 416 Query: 403 -----TPEQPGKQNLP-GAEEGDGFFYAKLIKK 429 + G Q LP +GDGF+YA L K+ Sbjct: 417 NLPNQIKQNIGYQCLPLHQNDGDGFYYALLQKR 449 >UniRef50_A4T0M4 Sun protein n=2 Tax=Polynucleobacter necessarius RepID=A4T0M4_POLSQ Length = 438 Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 166/436 (38%), Positives = 238/436 (54%), Gaps = 32/436 (7%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 ++AAQA+ +V+ G+SL+ +L ++ ++ ++Q L F LR + LI + + Sbjct: 17 TIAAQAISEVMS-GRSLTEVL----DELDAHERPIVQSLTFDALRKWVRSHELIKQFV-- 69 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAI-----KRPQLKGLINGVLR 123 P T H L + + A+ V+ A+ + KGL+N VLR Sbjct: 70 PKTPPPEVDHLLSVAIALFIRNDADDKGYAVHTVVDQAVRACGEYDQTLYAKGLVNAVLR 129 Query: 124 QFQRQQEELLAE-FNASDARYLH-PSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 + + + + F D + P W L++ Y + WQ+I+ A +R P+ LR+N+ Sbjct: 130 KVSLALQPVADKPFYPPDPIAMFVPPWWRASLKRNYSKDWQAILFAQAKRAPLILRVNQK 189 Query: 182 HHSRDSWLALLDEAGMKGFP-----HADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 +SRD + ALL E+G++ P P A+ L PV LPGF G V+VQDA AQ Sbjct: 190 QYSRDEYRALLTESGIQSKPINAIAGISLPSALLLPDAVPVSDLPGFYSGAVSVQDAGAQ 249 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM- 295 T L PQ E ILD CAAPGGKT H+LE+A + Q+ A+++D +RL ++ NL RL + Sbjct: 250 LAATLLNPQADELILDACAAPGGKTAHLLELA-DCQMRALELDGKRLGKIGGNLDRLRLH 308 Query: 296 --KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 KA V +GD + W G FD+IL+DAPCSA+G++ RHPDI +LRR+ DIP L Q Q Sbjct: 309 SEKAKVLRGDASKSAWWDG-VPFDKILIDAPCSASGIVARHPDIPFLRRESDIPVLQQRQ 367 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLP 413 EIL W LK+GG L+Y TCSV PEE Q F Q ++A + PG Q LP Sbjct: 368 REILTQAWKMLKSGGILLYVTCSVFPEEGEDQAVWFAQEHSNALRLDA-----PG-QLLP 421 Query: 414 GAEEGDGFFYAKLIKK 429 + DGF+YA L KK Sbjct: 422 -TDANDGFYYA-LFKK 435 >UniRef50_A6GKY6 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GKY6_9BURK Length = 455 Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 155/443 (34%), Positives = 236/443 (53%), Gaps = 45/443 (10%) Query: 15 VEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGK 73 + +V+ +G+SL L + V + + +Q+L + +R L + +++ R ++GK Sbjct: 27 MTRVLREGRSLDQALAAETKGVKTPQALGAIQDLAYFGMRNLGR-----GQVLTRLISGK 81 Query: 74 Q----RTVHYLIMVGLYQLLYT----RIPPHAALAETVEGAIAIKR-PQLKGLINGVLRQ 124 ++ L+ +G + LL+ + P H + + V ++ + KGL N LR Sbjct: 82 TLLNPEPLNELMALG-FGLLWDDKNPKYPAHTVVDQMVYACTGSEQFARAKGLANACLRN 140 Query: 125 FQRQQ--------EELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWL 176 F R E+ LA+ N P+W +++L+ ++P+ W++++ PP+ + Sbjct: 141 FLRDSNTWRNKAMEDPLAQHNL-------PAWWIEKLKASHPQHWETMLAQAQSHPPLVV 193 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 R+N S ++ L+ AGM+ + AV L P PV ALPGF+ G V+VQD++AQ Sbjct: 194 RVNTRSSSASAYAEQLNAAGMQASVIGE--QAVLLAKPVPVSALPGFDLGQVSVQDSAAQ 251 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L PQNG+ ILD CAAPGGKT H+LE+A + ++VA+D QRL RV DN++R+ Sbjct: 252 LASQLLNPQNGQRILDACAAPGGKTGHLLELA-DIELVALDSSPQRLGRVEDNIRRIAPT 310 Query: 297 AT------VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 +K W FD IL D PC+ +GV+RRHPDI WLRR DI +L+ Sbjct: 311 LNGQWDLRLKVAQAELLDTWWDGVPFDGILADVPCTGSGVVRRHPDIPWLRRPDDIAKLS 370 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG----TPEQ 406 Q+Q +IL+A+W LK GGTL+ TCS+ PEE L KAFL +DA L + P Sbjct: 371 QIQHKILNALWSTLKPGGTLLLVTCSIFPEEGPLLAKAFLDNHSDA-LAQNAPGWVLPVA 429 Query: 407 PGKQNLPGAEEGDGFFYAKLIKK 429 P + DGFFYAK K Sbjct: 430 PANPDQGFDASPDGFFYAKFEKS 452 >UniRef50_C0GIQ4 Sun protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIQ4_9FIRM Length = 451 Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 149/410 (36%), Positives = 215/410 (52%), Gaps = 22/410 (5%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHA 97 +DK L E+ +GV+ LDWLI K+ RP+ + +H ++ +G YQL Y R+PP A Sbjct: 43 RDKRLAAEITYGVITYKLTLDWLIEKVSGRPIKKLDKPIHQILRIGFYQLFYLDRVPPAA 102 Query: 98 ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL------LAEFNASDARYLHPSWLLK 151 A+ TVE K+ L +NGV+R R+++ L N RY HP WL++ Sbjct: 103 AVHATVELVKKGKKRGLAPFVNGVMRGALRKKDHLPWPDKKKDSANYLSVRYSHPLWLVR 162 Query: 152 R-LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVR 210 R L + PE+ + +V ANNQ P+ +R+N RD+ L+ L AG++ P P+ Sbjct: 163 RWLNRYGPEEAEKLVAANNQAAPLSIRVNTLRTDRDTLLSELTAAGVEAVPSTVVPEGAL 222 Query: 211 LETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE 270 L + L + +G VQ SA L PQ G+ +LD C+APGGKTTH+ ++ Sbjct: 223 LTRSGRLTELAPYREGRFQVQGESAMLTSRVLDPQAGDAVLDGCSAPGGKTTHLAQLMNN 282 Query: 271 A-QVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSAT 328 + ++A+DI RL V N +R+G+ Q D R ++ FD ILLD PCS Sbjct: 283 SGDILALDIHPHRLELVKANCRRMGVDIVRTQCLDAREIAKE-NPDSFDCILLDVPCSGF 341 Query: 329 GVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKA 388 GVIRR PD+KW R + DI +LA +Q ++L A LK GGTLVY+TC+ PEE ++ Sbjct: 342 GVIRRKPDLKWRRSEDDIRKLAHVQCDMLKAAAAVLKPGGTLVYSTCTNEPEETDEVVEE 401 Query: 389 FLQRTADAELCETGTPEQP----------GKQNLPGAEEGDGFFYAKLIK 428 L+ D + + P P G LP DGFF ++L K Sbjct: 402 LLKNQDDM-VPDDLRPYLPQDWQQDAGKTGIHLLPHIHGVDGFFISRLKK 450 >UniRef50_A5WI31 Fmu (Sun) domain protein n=3 Tax=Psychrobacter RepID=A5WI31_PSYWF Length = 528 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 167/505 (33%), Positives = 238/505 (47%), Gaps = 99/505 (19%) Query: 19 VEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVH 78 ++QGQSLS +L PL ++ DK L LR L++ L P+ + V Sbjct: 25 IQQGQSLSGLLDPLLNSLNGDDKGFAHALLLTTLRHWHATARLLDSLADNPI--DEIEVR 82 Query: 79 YLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNA 138 I +G+ QLLY + HAA+ ETVE I + GL+N VLR+ + + + N Sbjct: 83 TTIQLGITQLLYLNVADHAAIHETVEAVKHIDYARASGLVNAVLRKVAKNPNKFRKKANK 142 Query: 139 SDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMK 198 + + P+WL ++L+ + E + + ++ Q PM+LR+N S+LA L EA + Sbjct: 143 NHSL---PNWLAQQLKVDWREHYDELTQSLRQSAPMFLRVNGLQTDSQSYLAQLTEADIA 199 Query: 199 GFPHA-----DYPD----------AVRLETPAPVHALPGFEDGWVTVQDASAQ------- 236 A PD A+ L PV LP FE+G +VQDA AQ Sbjct: 200 AELIALETSLKMPDTGETIGIKQQAIELIDSVPVSRLPEFEEGIASVQDAHAQLAAPIID 259 Query: 237 GCMTWLAPQN-GEHI--LDLCAAPGGKTTHILEV-----------------------APE 270 + + N EHI LD CAAPGGK H LE+ + Sbjct: 260 ALLQQVMSANPAEHIRLLDACAAPGGKLAHWLELLGNQEKQQTGLFHVKQSDSQESTIDK 319 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY------PSQW------CGEQQFDR 318 ++ A+D + R++R+++NL+RL + A + + W FD Sbjct: 320 VKLTAIDNEAPRITRIFENLERLQLPAPIVNSKLHLDIECVDATTWQAKAVSADSSGFDA 379 Query: 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 ILLDAPC+ATGVIRRHPDI LR + D+ QLQ +ILD +WP LKTGG L+Y TCS+L Sbjct: 380 ILLDAPCTATGVIRRHPDITLLRNEEDVQHTVQLQEQILDNLWPQLKTGGYLLYVTCSIL 439 Query: 379 PEENSLQIKAFLQRTADAEL----CET--GTPEQPGKQNLP-----------GAEE---- 417 +EN Q++AFL R DA ET G ++ G+Q LP A++ Sbjct: 440 KQENVEQMQAFLSRHKDAVAIAFDSETNWGIEQEVGRQCLPIYKMTEALAPIAAQDDTPE 499 Query: 418 -------------GDGFFYAKLIKK 429 GDGF+YA L K+ Sbjct: 500 AAKVQVNAQAPAGGDGFYYAVLKKQ 524 >UniRef50_A8FD39 rRNA SAM-dependent methyltransferase RmsB n=3 Tax=Bacillaceae RepID=A8FD39_BACP2 Length = 447 Score = 224 bits (571), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 164/453 (36%), Positives = 236/453 (52%), Gaps = 34/453 (7%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ-----QKVSDKDKALLQELCFGVLRTLSQ 57 K+ N+R +A A+ ++ EQ Q+ SN+L LQ + ++D+DK LL EL +G L+ Sbjct: 2 KKSNVREVALDALIKL-EQNQAYSNLL--LQSVMKDKDLADQDKPLLTELVYGTLQNKLA 58 Query: 58 LDWLINKLMARPMTGKQRT---VHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQ 113 LD+++ + +P Q+ V L+ + LYQ++Y +IP AA+ E VE Sbjct: 59 LDYMLAPFVKKP----QKVAPWVMQLLRMSLYQMVYLEKIPDRAAIHEAVELTKKRGHKG 114 Query: 114 LKGLINGVLRQFQRQQEELLAEFNASDARYL----HPSWLLKRLQKAYP-EQWQSIVEAN 168 + L+NGVLR QR+ + R HP WL++ ++Y E +S+ + Sbjct: 115 ISSLVNGVLRSVQREGVPAFDDIKDPVKRLSIETSHPLWLVQEWVQSYGFEATESMCRIH 174 Query: 169 NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWV 228 P LR+NR R + L +AG++ DA++L + + P F++G+V Sbjct: 175 LVPPKQTLRVNRIKTDRAALKQKLLDAGIETELGDLSEDALKL-MKGSIVSTPSFQEGYV 233 Query: 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVY 287 T+QD S+ L PQ GE +LD CAAPGGK+THI E + E Q+V++D+ E ++ + Sbjct: 234 TIQDESSMLVARALDPQPGETVLDACAAPGGKSTHIAERMNDEGQIVSLDLHEHKVKLIK 293 Query: 288 DNLKRLGM-KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 KRL + + K D R E FDRIL+DAPCS GVIRR PD+K+ + D Sbjct: 294 QAAKRLNLTQIEAKALDARKAKDDYSEASFDRILIDAPCSGFGVIRRKPDMKYTKSPEDS 353 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE---LCETGT 403 LA +Q IL P LK GGTLVY+TC++ P EN I AFLQ D E Sbjct: 354 ARLAIIQQAILKETAPLLKPGGTLVYSTCTMDPSENQQVIHAFLQEHQDFEPDLSLNERL 413 Query: 404 PEQ--PGKQN-----LPGAEEGDGFFYAKLIKK 429 PEQ P QN LP DGFF + KK Sbjct: 414 PEQVAPFVQNGSVQILPHYFGTDGFFICSMRKK 446 >UniRef50_Q6AS22 Related to SUN protein (FMU protein) n=1 Tax=Desulfotalea psychrophila RepID=Q6AS22_DESPS Length = 454 Score = 224 bits (570), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 161/439 (36%), Positives = 236/439 (53%), Gaps = 23/439 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R +AA+ + QV ++ Q + IL L Q++++ ++++L + FGVLR LD L+ KL Sbjct: 6 RYIAAETLCQVYKKQQPVKPILEKLCQQKQLNPRERSLAMNMVFGVLRKRQYLDILLRKL 65 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIK-RPQLKGLINGVLR 123 + VH + VGLYQL + IP A + E V K +L G +NG+LR Sbjct: 66 STVRLKKLDPFVHQALTVGLYQLFFLDSIPESAIVNEAVNSCKTAKVHKRLHGFVNGILR 125 Query: 124 QFQRQQEELLAEFNASDAR-YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRT 181 RQ+E L + + PS L KR Q+ + E+ + I E N + PP+ LR+N T Sbjct: 126 NATRQKEALANGMKEQEQEIHTTPSGLFKRWQERFGLEKARYICEINGEEPPLTLRVNST 185 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCMT 240 S D + ALL G+ G P+++ +E + +PG++DG VQD++AQ Sbjct: 186 KTSIDDFEALLTREGITG-TRGPAPESLIIEDYQGLIGDIPGYKDGLFQVQDSAAQLASL 244 Query: 241 WLAP-QNGEHILDLCAAPGGKTTHILEVAP--EAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 L P ++G H LD CA GGKT+HI+++ E +V+AV+ D +R + N++RL Sbjct: 245 LLLPIKSGGHYLDACAGLGGKTSHIIQLGADKEIKVIAVEPDAKRKEKFITNIERLFTHH 304 Query: 298 TVKQGDGRYPS-----QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 V+ +P+ + Q FD IL+DAPCS TGVIRR PDI+W R++ D + + Sbjct: 305 EVE----LHPTSLQEFKASNTQAFDGILVDAPCSGTGVIRRQPDIRWNRKEEDFLQKQII 360 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL--CETGTPEQPGKQ 410 Q EIL L G LVYATCS+ EEN IK FL D L C+ PE+ G+ Sbjct: 361 QLEILSLAAEMLAPTGILVYATCSLEIEENEDLIKKFLLLFPDFYLTDCQNYLPEEVGEH 420 Query: 411 NLPGAEEGDGFFYAKLIKK 429 P A++GDG F+A L K Sbjct: 421 IRP-AKDGDGSFFAPLPSK 438 >UniRef50_B4WR53 Ribosomal RNA small subunit methyltransferase B n=4 Tax=Cyanobacteria RepID=B4WR53_9SYNE Length = 491 Score = 221 bits (563), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 152/416 (36%), Positives = 219/416 (52%), Gaps = 28/416 (6%) Query: 35 KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRI 93 ++S +DK L+ EL +G +R LD LI++ RP + + R + ++ +G YQL Y + Sbjct: 75 QLSSQDKGLVTELVYGSVRRRRTLDALIDQFGKRPASKQHRDLLQILRLGFYQLRYLDHV 134 Query: 94 PPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL---------LAEFNASDARYL 144 P HA + TV+ A + + +L G++N +LRQ+ R+ L E L Sbjct: 135 PVHAVVDTTVQLAKSQRLGKLSGVVNAMLRQYAREAMPAANVIADPLKLPEERTRRLGIL 194 Query: 145 H--PSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFP 201 H P W++ + P+ Q +++ E N+ P + LRIN S + +AL +AG++ P Sbjct: 195 HSYPDWIIDVWRSMLPDDQVEALCEYFNRSPYLELRINLQRQSLSAAIALFADAGIEALP 254 Query: 202 HADYPDAVRLETPA-PVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGK 260 P A+RL T A V LPG+ +GW VQD+SAQ L PQ GE I+D CAAPGGK Sbjct: 255 IEGVPSALRLTTHAGAVTQLPGYAEGWWAVQDSSAQLVSYLLDPQPGEVIIDACAAPGGK 314 Query: 261 TTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ---GDGRYPSQWCGEQQF 316 + HI E+ E V + D R ++ N+ RLG AT+ + GD R + G Q Sbjct: 315 SLHIAELMRNEGTVWSCDRTSSRTKKIQQNIDRLG--ATIVRPIMGDSRNQPTFLG--QG 370 Query: 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 DR+LLD PCS G + RH D +W + + L LQ EIL +K GG LVYATC+ Sbjct: 371 DRVLLDVPCSGLGTLNRHADARWRQTPDSVDSLVTLQQEILMHASTWVKPGGVLVYATCT 430 Query: 377 VLPEENSLQIKAFLQRTA----DAELCETGT-PEQPGKQNL-PGAEEGDGFFYAKL 426 + P+EN QIK FL + A +A G P + G + P + DGFF KL Sbjct: 431 LHPQENEAQIKTFLSQNAGWTIEAPPPSFGIEPTEAGWIKVWPHIQHMDGFFIVKL 486 >UniRef50_A0LDW0 Sun protein n=2 Tax=cellular organisms RepID=A0LDW0_MAGSM Length = 452 Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 157/454 (34%), Positives = 237/454 (52%), Gaps = 35/454 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQL 58 K + R+MAA AV ++ + L L Q S + + E+ G +R ++ L Sbjct: 3 KSHVSERTMAAAAVSAMLSEHLPLETALEQQIHQQSGTSPEMRGRAHEIVVGTIRHMALL 62 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ---LK 115 + + + M + + K V +++ LYQ + R P H+A+ E V+ + ++P+ L Sbjct: 63 EATLTRFMQKDLKAKHHYVRAVLLTALYQAQFMRTPIHSAVDEAVK--LVKQQPRDHNLS 120 Query: 116 GLINGVLRQFQRQQEELLAEFNASD-------ARYLHPSWLLKRLQKAYP-EQWQSIVEA 167 G +N VLR+ + EL ++A RY HP WL+KR +K E ++ + A Sbjct: 121 GFVNAVLRR--STEVELSTTWSAVKDPLKRLATRYSHPLWLVKRWEKRLGMEATEARLAA 178 Query: 168 NNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGW 227 N + P+ LRI+ + +LA +A ++ + + + L A V LPG+ +GW Sbjct: 179 ANAQAPLTLRIHTPKVTVADYLAAAKQAEIEVTVCPEAEETLMLPQGAKVATLPGYSNGW 238 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRV 286 VQD +AQ LAPQ GE ILD CAAPGGK+ H++ + V+ A+D +QRL R+ Sbjct: 239 FAVQDRAAQAVARLLAPQAGEAILDACAAPGGKSAHLVALGGAGVVITALDSAQQRLERM 298 Query: 287 YDNLKRLGMKATVKQ--GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 +N+ RLG+++ VK D P E FDR L+DAPC+ TGVIRRHPDIKW R Sbjct: 299 GENMARLGIRSQVKLRCADATQPI----EGLFDRALVDAPCTGTGVIRRHPDIKWRRNPS 354 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ-----RTADAELC 399 + E+ + Q +IL ++ +K GG LVYATCS+ P+EN Q+ FL+ + E Sbjct: 355 GLAEVVKQQQQILQSVAAAVKPGGLLVYATCSLEPDENEQQVARFLKEHPQWKRLPLEAG 414 Query: 400 ETGT-PE---QPGKQNLPGAEEG-DGFFYAKLIK 428 G PE G A G DGF+ A+LIK Sbjct: 415 MAGILPEWIDSAGDLRTEPATHGVDGFYAARLIK 448 >UniRef50_B7KB91 Sun protein n=19 Tax=Cyanobacteria RepID=B7KB91_CYAP7 Length = 452 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 146/410 (35%), Positives = 226/410 (55%), Gaps = 24/410 (5%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAA 98 D+ L+ EL +G++R LD +I++L + + + ++ +GLYQL Y +IPP AA Sbjct: 43 DRGLVTELVYGIVRRQRTLDEIISQLGTKKANQQPPDLRLILHIGLYQLRYLDQIPPSAA 102 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELL--AEFNASDARYL-----HPSWLLK 151 + +VE A K +L G++NG+LRQ+ R +E+ +F + +L P+W+++ Sbjct: 103 VNTSVELAKKNKLGKLSGVVNGILRQYDRIKEQGKDPLKFPSDPVNHLGVLHSFPNWIIQ 162 Query: 152 R-LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVR 210 L + EQ + + E NQ + +R+N + + ++ + G+K P P ++R Sbjct: 163 LWLDEFGQEQTEQLCEWFNQPAMIDIRVNLLKTTVEKVASIFSDVGVKVKPIPHLPQSLR 222 Query: 211 L-ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP 269 L + LPGFE+GW TVQD+SAQ L PQ E I+D CAAPGGKTTHI ++ Sbjct: 223 LIGGTRSIQQLPGFEEGWWTVQDSSAQLVTHLLDPQPDEIIIDACAAPGGKTTHIAQLMG 282 Query: 270 EAQVV-AVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSA 327 + + A D RL +V N +RL + + + +GD R+ +Q+ + DR+LLDAPCS Sbjct: 283 DRGTIWACDRVPSRLRKVQQNAERLQLNSIRICEGDSRHLTQF--RETADRVLLDAPCSG 340 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 G + + PDI+W + I EL+QLQ+E+L+ +K G LVYATC++ P EN I Sbjct: 341 LGTLHKRPDIRWRQTPEKIAELSQLQTELLEETATWVKPKGILVYATCTLNPLENERVIA 400 Query: 388 AFLQR---------TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 AFL R ++D + TP K LP + DGFF KL+K Sbjct: 401 AFLDRHPSWHIQTPSSDNTVAAFATPSGWIKV-LPHQHQMDGFFMVKLVK 449 >UniRef50_B3E3P1 Sun protein n=4 Tax=Desulfuromonadales RepID=B3E3P1_GEOLS Length = 464 Score = 216 bits (551), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 153/406 (37%), Positives = 213/406 (52%), Gaps = 21/406 (5%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAA 98 D+ L EL FGVLR LD + +L+ +P+ + V L+ +GLYQL Y R+P HAA Sbjct: 53 DRGLFAELVFGVLRRQGTLDHYLKQLVQQPLERLELPVLLLLRLGLYQLRYLDRVPSHAA 112 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASD------ARYLHPSWLLKR 152 + TVE I P+ KGLINGVLR + R+QE L A A Y P WL ++ Sbjct: 113 VHATVELTNEIL-PRAKGLINGVLRSYLRRQESLTLPDPARQPAAWLAAAYSLPGWLAEQ 171 Query: 153 -LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 LQ+ + + A+ + PP+ LR+N SR + L A + P P+ ++L Sbjct: 172 WLQQFSQNEAAGLAAASTEIPPLTLRVNTLRISRSALLERFHAAELAAEPCRFAPEGIQL 231 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE- 270 + LPGF++G VQD ++Q LAPQ GE ILD+CAAPGGK TH+ ++ + Sbjct: 232 LQRCQITGLPGFDEGLFMVQDEASQLVAHLLAPQTGEQILDMCAAPGGKATHLAQLMNDR 291 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 + A D++ +R+ R+ ++ +RLG+ + S + QFDRILLDAPCS GV Sbjct: 292 GCITATDLNARRIRRICESAQRLGLTSIQAVAADALTSDYLEGLQFDRILLDAPCSGLGV 351 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 IRR+P+ KW +I A Q ++DA LK G LVYATCS EE+ IK FL Sbjct: 352 IRRNPEAKWRLTPAEISRCAARQHLLIDAAAARLKPAGVLVYATCSTAMEEDETVIKDFL 411 Query: 391 QRTADAELCETGTPEQPGKQNL----------PGAEEGDGFFYAKL 426 R + + E G P +L P DGFF A+L Sbjct: 412 SRHPEF-VVENGAQFFPAWTDLFDCSGYLRAWPHRHGTDGFFAARL 456 >UniRef50_P72943 Ribosomal RNA small subunit methyltransferase B n=4 Tax=Chroococcales RepID=RSMB_SYNY3 Length = 446 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 152/413 (36%), Positives = 218/413 (52%), Gaps = 22/413 (5%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIP 94 +S D+ EL +GV+R LD LI +L RP+ + + ++ +GLYQL Y ++P Sbjct: 35 LSPPDRRFCTELVYGVVRRQRTLDCLIEQLGDRPIGKQPPDLRRIVQLGLYQLRYLDQVP 94 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEE----LLAEFNASDARYLHPSWLL 150 AA+ V+ A A L ++NG+LR++QR +E+ L E + +Y P WL+ Sbjct: 95 ASAAVNTGVDLAKANGLKGLSKVVNGMLRRYQRAEEQGKNILDQEKISLGEQYSFPDWLM 154 Query: 151 KRLQKAYPE-QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAV 209 + ++ + + + +S+ NQ P + LRIN SR L E + A P + Sbjct: 155 ELFEQTWGKAETESLCAYFNQNPSLDLRINPLKTSRVEVAQSLAELNLTTTAMAGLPQGL 214 Query: 210 RLE-TPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV- 267 RL + LPGF +GW TVQDASAQ L PQ E I D+CAAPGGKTTHI E+ Sbjct: 215 RLGGKTGAITQLPGFAEGWWTVQDASAQWVAQILNPQPEETIFDVCAAPGGKTTHIAELM 274 Query: 268 APEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCS 326 + Q+ A D RL ++ +RLG+ + + +GD P + DR LLD PCS Sbjct: 275 GDQGQIYAGDRHGWRLQKLAVTQQRLGLTSIKIWEGDLTQPGVKPPVELVDRALLDVPCS 334 Query: 327 ATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQI 386 G + R+PD++W + I L LQ +L AI P +K+GGTLVY+TC++ P EN QI Sbjct: 335 GLGTLHRNPDLRWRQTPATIATLLPLQQALLKAIAPLVKSGGTLVYSTCTLNPAENEAQI 394 Query: 387 KAFLQRTAD--AELCETGTPEQPGKQN---------LPGAEEGDGFFYAKLIK 428 + FLQ D +E E +P+ G+ N LP DGFF A L K Sbjct: 395 ERFLQDHEDWRSEPFEWTSPQ--GQTNSVTSGMLTILPHHHHQDGFFIANLKK 445 >UniRef50_A5D1B7 tRNA and rRNA cytosine-C5-methylases n=6 Tax=Clostridia RepID=A5D1B7_PELTS Length = 456 Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 141/449 (31%), Positives = 225/449 (50%), Gaps = 32/449 (7%) Query: 8 RSMAAQAVEQVVEQGQ----SLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 R +A + V V E+G +L+ +L + + D+A EL +G LR+L+ LDW++ Sbjct: 10 RELALKVVNAVEEEGAYANLALNQVLE--KHRPGKLDRAFATELAYGTLRSLNTLDWVLE 67 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + +P++ + RTV ++ +G+YQL++ R+PP A E E A +NGVL Sbjct: 68 QFIKQPLSSQSRTVLNILRLGVYQLMFMDRVPPSAVCNEGAELARKYGHAGTVKFVNGVL 127 Query: 123 RQFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 R R+ E+ D RY HP W++KR K + + ++ ANN P Sbjct: 128 RNISRRLNEISFPALEDDPVKHISLRYSHPVWMVKRWLKEFGLDHTVALCRANNGPAPNT 187 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R N +RD L G+ P+ ++++ + +L F++G +QD S+ Sbjct: 188 VRTNTLKITRDGLAERLRNEGLTVSETEFAPEGLKIDGFFSIGSLQSFKEGLFQIQDESS 247 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLG 294 L P G ++D C+APGGKTTH+ ++ +++AVDI +L + +N RLG Sbjct: 248 MLAGRALMPAPGAFVIDACSAPGGKTTHLAQLMENRGRILAVDIHPHKLVLIKENCSRLG 307 Query: 295 MKATVK-QGDGR-YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + GD R P + F IL+DAPCS GV+RR PD +W + +P + QL Sbjct: 308 INIVEGLAGDARELPENLYNKADF--ILVDAPCSGLGVLRRRPDARWRKEPGQLPAIIQL 365 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412 Q EIL+ + LK G +VY+TC++ EEN Q++ FL + L E +P P + Sbjct: 366 QREILEGVARCLKKNGVIVYSTCTITREENLRQVEWFLDKHPQFVL-EDLSPFLPAGLDF 424 Query: 413 PGAEEG------------DGFFYAKLIKK 429 G +G DGFF A++ KK Sbjct: 425 EGTLKGGFLQVLPYRHGMDGFFIARMRKK 453 >UniRef50_B9M341 Sun protein n=4 Tax=Geobacter RepID=B9M341_GEOSF Length = 448 Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 145/411 (35%), Positives = 219/411 (53%), Gaps = 24/411 (5%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAA 98 D+ LL EL +GVLR + LD +I + ++ + +R+V L+ +GLYQ+ Y R+P AA Sbjct: 41 DRGLLTELVYGVLRRQATLDHIIRRFSSQRLERLERSVLLLLRIGLYQMFYLDRVPVSAA 100 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASD-ARYL-----HPSWLLKR 152 + ETV+ A + P+ G IN VLR R+++ + D A YL HP WL Sbjct: 101 VNETVKLAKVLV-PRASGFINAVLRNADRERDHISYPDREKDPAAYLATVYSHPVWLAAA 159 Query: 153 -LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 + + ++ + + A + P + +R N +R + +L G++ P A+R+ Sbjct: 160 WIGQLGLDEAEMLARAMAEPPAITVRTNTLKTTRQQLMEILSAEGVQCETGRFSPMAIRI 219 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE- 270 V L F DG VQD S+Q +L PQ GE +LD CAAPGGK+T + ++ + Sbjct: 220 NLSGSVSRLKSFRDGLFFVQDESSQLAAMFLGPQAGERVLDACAAPGGKSTQLAQLMGDR 279 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKA--TVKQGDGRYPSQWCGEQQFDRILLDAPCSAT 328 +++A D+ ++L V +N RLG+ + TV R P + DRILLDAPCS Sbjct: 280 GEILACDVIGRKLKLVDENAARLGISSIRTVLLDTAR-PLKSLERSPLDRILLDAPCSGL 338 Query: 329 GVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKA 388 GVIRR+P+ KW + D+ +LA+ Q +L+ + HL++GG+L+YATCS EEN I+A Sbjct: 339 GVIRRNPEGKWWKSAADVIDLAKGQRALLENLAGHLRSGGSLLYATCSTAVEENEAVIEA 398 Query: 389 FLQRTADA----------ELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 FL R + +L E TP + P DGFF A+L KK Sbjct: 399 FLSRHDEFVIEDLRLLFPDLAELFTPAGFFRA-WPHRHGMDGFFAARLKKK 448 >UniRef50_B6BVG1 Sun protein n=1 Tax=beta proteobacterium KB13 RepID=B6BVG1_9PROT Length = 412 Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 120/388 (30%), Positives = 208/388 (53%), Gaps = 15/388 (3%) Query: 38 DKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHA 97 + +K ++++ +G +R D+++ K + + + + YL+M +YQ+ + Sbjct: 32 ENNKNFIKDIVYGGIRDFYLNDYILKKFVKKDIN--DHLIKYLLMNTIYQINHQSKAEFT 89 Query: 98 ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAY 157 + E V+ A I L+N VLR + R++++L+ RY +P W + L K Y Sbjct: 90 VVNEAVKAAKKINN-NFYNLVNAVLRNYLREKDKLVTP-EEMYIRYSYPQWWVSDLMKEY 147 Query: 158 PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPV 217 P +++I+ N R +RIN+ S + ++ LL++A + + +++ + Sbjct: 148 PNDYEAILAIGNTRAKTVIRINQRQISLNDYIDLLEQANI-DYELTLEDKYIQISNVKDI 206 Query: 218 HALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVD 277 LPG+E G VQD +AQ +L QNG +ILDLC+APGGK THILE + + D Sbjct: 207 TMLPGYERGHFYVQDPAAQLACDFLDIQNGMNILDLCSAPGGKATHILE-RFDVDLDCYD 265 Query: 278 IDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDI 337 I ++R++ + N+KRL +K+ + + + +++DRIL+DAPCS +GV+RR+ DI Sbjct: 266 ISKERINLIRSNMKRLQLKSNIIE-------KIDINKRYDRILIDAPCSGSGVVRRNIDI 318 Query: 338 KWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE 397 K +R+ +DI + + Q ++L+ W LK+GG L+Y TCS+ EN + FL + DA Sbjct: 319 KLMRKQQDIEKFSNQQLQLLEEGWKILKSGGKLLYVTCSIFKHENENVVMKFLSKNKDAA 378 Query: 398 LCETGTPEQPGKQN--LPGAEEGDGFFY 423 + P QN L + DG F+ Sbjct: 379 SQDLIIPNGFKYQNTQLIPNQFHDGLFF 406 >UniRef50_A5GRG8 Ribosomal RNA small subunit methyltransferase B n=19 Tax=cellular organisms RepID=A5GRG8_SYNR3 Length = 454 Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 148/405 (36%), Positives = 217/405 (53%), Gaps = 23/405 (5%) Query: 33 QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQ-LLYT 91 + K+S +D+ L EL +G +R +LD ++ L P + + +L+ VGL Q LL Sbjct: 58 RSKLSPRDRGLATELAYGAIRQRRRLDGWLDLLGKVPAAKQPPRLRWLLHVGLQQILLMD 117 Query: 92 RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDAR------YLH 145 R+P AA++ VE A + +L ++NGVLR R E + SD + + Sbjct: 118 RVPASAAVSTAVELAKRERLQRLAPVVNGVLRAAVRAVEAGESLPVPSDPQKRLALEHSL 177 Query: 146 PSWLLKRL-QKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD 204 P WL+ L + PE+ +++ A+N+ PP+ LR NR SR++ L L + A+ Sbjct: 178 PDWLVAELWGQIGPERTEALAAASNRIPPLDLRCNRLRSSREALLENLPAVAL-----AE 232 Query: 205 YPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTH 263 PD + L + P P+ L GF +G VQD +AQ L P+ G+ +LD CAAPGGKTTH Sbjct: 233 LPDGLTLTSRPGPLPQLAGFSEGQWCVQDRAAQRIAPLLDPKPGQRVLDACAAPGGKTTH 292 Query: 264 ILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILL 321 I E+ + +VVAVD+ +RL +V N +RLG+ + D + W E FDR+LL Sbjct: 293 IAELMGDQGEVVAVDVAPRRLQQVSANAERLGLSCIRTEAADATDLTDWEAES-FDRVLL 351 Query: 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEE 381 D PCS G + RH D +W + I EL LQ ++L+ LK G LVYATC+V P E Sbjct: 352 DVPCSGLGTLARHADARWNLKPDGIEELVGLQHQLLEQGARLLKPDGRLVYATCTVHPAE 411 Query: 382 NSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 N+ ++AF++ D + E P Q P + GDGFF A L Sbjct: 412 NTGVVEAFVEENPDWQFSE------PPMQLWPDPQGGDGFFAAVL 450 >UniRef50_C6D4F5 Sun protein n=87 Tax=Bacilli RepID=C6D4F5_PAESJ Length = 491 Score = 213 bits (543), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 151/456 (33%), Positives = 226/456 (49%), Gaps = 34/456 (7%) Query: 5 RNLRSMAAQAVEQVVEQGQ----SLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 R R +A + +V E G L+ +L Q + D AL+ EL +G ++ LD Sbjct: 38 RTPRELALDTLVKVAETGAYSNLQLNRVLQEAQ--LQRADAALVTELVYGTIQRQLTLDH 95 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLIN 119 + K A+ + + VH L+ + YQLLY RIP HAA+ E V A + G++N Sbjct: 96 WLGKFAAKGLRKLEPWVHQLLRMSAYQLLYLDRIPAHAAVNEAVTIAKRRGHQGISGMVN 155 Query: 120 GVLRQFQRQQEELLAEFNAS-------DARYLHPSWLLKRLQKAY-PEQWQSIVEANNQR 171 G+LR R + EL + A RY +P WL++R KAY E ++I + N+ Sbjct: 156 GILRSIDRNRAELTVDAIADKNPVVQISVRYSYPEWLVERWVKAYGAETAEAICASGNEP 215 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P +R+N SR+ L+LL E G P + + + GF DG T+Q Sbjct: 216 PHASVRVNPLRSSRNEVLSLLTEQGGDAEASRLAPAGIVVRRGGNLADTEGFRDGLWTMQ 275 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNL 290 D S+ +AP+ G +LD CAAPGGKTTH+ E+ + + +V A D+ + + D Sbjct: 276 DESSMLVAEVVAPKAGMQVLDCCAAPGGKTTHMAELMSGKGKVYANDLHPHKRQLIVDQA 335 Query: 291 KRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 RLG++ + + G+ ++ D +LLDAPCS GVIRR P+IKW + D+ E Sbjct: 336 VRLGLQNIEAITEDAGKLGERFA-PASIDAVLLDAPCSGFGVIRRKPEIKWTKTAGDVAE 394 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ------------RTADA 396 +A +Q +L A+ +K GGTLVY+TC++ EN Q+ FL+ A A Sbjct: 395 IAAIQRRLLGAVAGLVKPGGTLVYSTCTIESTENEEQVAVFLKEHPEFQLDAEWPEEALA 454 Query: 397 ELCETGTPEQP---GKQNLPGAEEGDGFFYAKLIKK 429 L E G + Q LP DGFF A+L ++ Sbjct: 455 PLREKGIIDSSFDGQAQLLPHHYGSDGFFIARLRRR 490 >UniRef50_Q2JK83 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JK83_SYNJB Length = 457 Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 155/457 (33%), Positives = 230/457 (50%), Gaps = 42/457 (9%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVS--DKDKALLQELCFGVLRTLSQLDWLIN 63 N R +A A++++ Q +L L S D+ L+ EL +G+ R LD LI+ Sbjct: 2 NARQLALLALQKIERQNAYADLVLGHLLANSSLIPADRHLVSELVYGITRRRRTLDALID 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 L RP + + ++ +GLYQL + +IP AA+ +VE A + L G++NG+L Sbjct: 62 CLAQRPAHKQPPDLRLILHLGLYQLAFLDQIPASAAIHTSVELARQMGLGSLTGVVNGIL 121 Query: 123 RQFQRQ-------------QEELLAE-FNASDARYLHPSWLLKRL-QKAYPEQWQSIVEA 167 R +QRQ ++ L A+ A R+ P WL+ ++ P + + + Sbjct: 122 RAYQRQVLDQPEKDPLKPLEDTLPADPIQALGIRHSFPDWLVSLWWERLGPVETEQLCAW 181 Query: 168 NNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPA-PVHALPGFEDG 226 NQ P + LR+N + + L AG+ P ++ P A+RL+ A + ALPGF G Sbjct: 182 FNQPPHLDLRVNPLRADVNKVIQALAAAGIPALPISEVPGALRLQDHAGDITALPGFAQG 241 Query: 227 WVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSR 285 W +VQDASAQ + WL PQ GE ++D CAAPGGKTT I + + ++ A+D RL R Sbjct: 242 WWSVQDASAQQVVHWLDPQPGERVIDCCAAPGGKTTQIAQHMQDRGEIWALDRHPHRLRR 301 Query: 286 VYDNLKRLGMKAT----------------VKQGDGRYPSQWCGEQQFDRILLDAPCSATG 329 + +N +RLG+ + V + P+ Q DR+LLDAPCS G Sbjct: 302 LEENRQRLGLSSIRPLAIDLLSLSAAADRVSGTESLPPAPLPPWQSADRVLLDAPCSGLG 361 Query: 330 VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAF 389 + RH D +W + IPELA LQ+++L LK GG LVYATC++ P EN I+AF Sbjct: 362 TLHRHADARWRQTPERIPELAHLQAQLLQVAARWLKPGGVLVYATCTLHPAENEEIIQAF 421 Query: 390 LQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 L + G P P ++ DGFF +L Sbjct: 422 LD--SHPNWAAEGDP----LLIWPHRQDRDGFFIQRL 452 >UniRef50_C5CKF6 Sun protein n=5 Tax=Betaproteobacteria RepID=C5CKF6_VARPS Length = 442 Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 149/407 (36%), Positives = 215/407 (52%), Gaps = 27/407 (6%) Query: 44 LQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETV 103 +Q L F VLR L + + L L R + + + + P + + V Sbjct: 40 VQALGFQVLRWLGRAEALRRHLAKRTPPPLPDALLCTALALAWDAQHAPYEPFTLVDQAV 99 Query: 104 EGAIAIKRPQLKG---LINGVLRQFQRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPE 159 E A + P + IN LR+F R+++EL+A + A++ HP W ++RL++ +P Sbjct: 100 EAAK--RNPATRAQASFINACLRRFLRERDELVAATDHEPVAQWNHPRWWIERLKRDHPR 157 Query: 160 QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHA 219 WQ ++ A+N +PPM LR+N + S+ L G+ + ++L PV Sbjct: 158 DWQRVLAADNAQPPMTLRVNLRKTTVASYQLALQAVGLTAVRVGEA--GLQLARARPVQQ 215 Query: 220 LPGFEDGWVTVQDASAQGCMTW----LAPQNGE---HILDLCAAPGGKTTHILEVAPEA- 271 LPGF DG +VQDA+AQ L P G +LD CAAPGGKT H+LE A A Sbjct: 216 LPGFADGECSVQDAAAQLAAPLLLEGLLPAAGAAPLRVLDACAAPGGKTAHLLEFAGPAA 275 Query: 272 -QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 +V A+++D R R+ + L RLG+ A V D P+ W FD ILLDAPC+A+G+ Sbjct: 276 IEVTALEVDAARSRRIDETLGRLGLSARVVVADAARPAAWWDGTPFDAILLDAPCTASGI 335 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 +RRHPD++WLRR+ D +LA Q+ +L A+WP ++ GG L+Y TCSV EE S QI AFL Sbjct: 336 VRRHPDVRWLRRESDTAQLAVQQAALLAALWPLVRPGGRLLYCTCSVFREEGSQQIDAFL 395 Query: 391 QRTADAELC--------ETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 DA L ++G + N G + DGFFYA L K+ Sbjct: 396 AHNTDARLGASPGHLLPQSGANARAVPDNPSG--DHDGFFYALLEKR 440 >UniRef50_B9QVY4 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Alphaproteobacteria RepID=B9QVY4_9RHOB Length = 468 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 150/445 (33%), Positives = 232/445 (52%), Gaps = 43/445 (9%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQ-----QKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R +AA + VV + + L L + ++ D+AL++ + LR ++ ++ Sbjct: 38 RKVAADILGNVVHKKRPLDGELDMASGHSGFRALAANDRALVRAIAGAALRHRGEITEIL 97 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGLINGV 121 +L+ R + K V ++ V + Q+ + IP AA++ V+ A +R + KGL+NGV Sbjct: 98 GRLLDRDIPEKTGRVLDILHVAIAQMQFLDIPDRAAVSLAVDHASMDRRARPYKGLVNGV 157 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINR 180 LR+ R+++E+ ++ +A R P WL + Q AY E+ ++I +A+ + + L + Sbjct: 158 LRRLGRERDEITSDLDAP--RLNTPDWLWESWQAAYGEEGARAIAKAHEREAALDLTVKA 215 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + W LD + +VRL V AL GFEDG VQDA+A Sbjct: 216 DAAA---WAEKLDGVVVGA-------GSVRLTKKGAVDALEGFEDGAWWVQDAAASLPAK 265 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 L +G+ + DLCAAPGGKT + V A++ A+DI + RL R+ +N+ RLG+ T Sbjct: 266 LLGDVSGKQVADLCAAPGGKTAQLAAVG--AEITAIDISKARLKRLAENMTRLGLSVTTV 323 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 D R ++ E FD ILLDAPCSATG IRRHPD+ W+++ DI +L+++Q+ +LD + Sbjct: 324 AADLR---EFEPEVLFDAILLDAPCSATGTIRRHPDVPWIKKPYDIEKLSEIQTALLDRV 380 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD------------AELCETGTPE--- 405 LK GG LVY TCS+ E Q +AFL+R D L E+ TPE Sbjct: 381 MSWLKPGGVLVYCTCSLERAEGEGQAEAFLERNKDRVSLVPVDASEIGGLAESVTPEGYL 440 Query: 406 --QPGKQNLP--GAEEGDGFFYAKL 426 +P + P G DGFF A+ Sbjct: 441 RCRPDQSAGPETGLFGMDGFFAARF 465 >UniRef50_A8G3E0 Sun protein (Fmu protein) n=7 Tax=Prochlorococcus marinus RepID=A8G3E0_PROM2 Length = 438 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 140/399 (35%), Positives = 216/399 (54%), Gaps = 21/399 (5%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLL-YTRIPPHAA 98 D A + EL FG +R LD + + + +L+ +GLYQLL +IP AA Sbjct: 41 DIAFITELSFGCIRYRKFLDLWTDHTSKITHKKQPPKLRWLLHIGLYQLLKMDKIPFPAA 100 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDAR----YLH--PSWLLKR 152 ++ TVE A L G +N +LR R+ E+ + +SD + YL P WL+K Sbjct: 101 ISTTVEVAKKTDLNGLAGTVNAILRNASRKLEQKIFPELSSDKKERISYLESFPLWLVKD 160 Query: 153 LQK-AYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 L K + ++I++A N++P + LRIN+ + D +L +L E + D + + L Sbjct: 161 LYKWVGNSEGENIIKAFNKKPSIDLRINQLKTNLDKFLIVLYENKIDAEIIKDLHNGITL 220 Query: 212 ET-PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE 270 ++ P + LPG+ DG T+QD S+Q L P+ GE ILD CAAPG K+TH+ E+ + Sbjct: 221 KSNPRSIKNLPGYSDGLWTIQDRSSQWIAPLLNPKEGEKILDACAAPGSKSTHLAELTND 280 Query: 271 -AQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGE--QQFDRILLDAPCS 326 A+++AVD E+RL + NL RL +K+ + D + + FD+ILLDAPCS Sbjct: 281 SAEILAVDRSEKRLKILQSNLVRLNLKSVNTLKADATSLIELNPKFISYFDKILLDAPCS 340 Query: 327 ATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQI 386 G + R+PD +W I L LQ ++L+ I+P LK G +VY+TC++ P+EN+L I Sbjct: 341 GIGTLSRNPDSRWSLSKEKIKSLTLLQEKLLEKIFPLLKKDGIMVYSTCTICPDENNLLI 400 Query: 387 KAFLQRTADAELCETGTPEQPGKQNLPGAEE-GDGFFYA 424 + F+++ +L KQ LP + GDGF+ A Sbjct: 401 EKFIEKNKGLKLVSQ-------KQILPRLDYPGDGFYSA 432 >UniRef50_C9RZP8 Sun protein n=5 Tax=Bacillales RepID=C9RZP8_GEOSY Length = 444 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 157/448 (35%), Positives = 222/448 (49%), Gaps = 30/448 (6%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R +A + + ++G L QK + +D ALL E+ +G ++ LD+ + Sbjct: 2 NVRELALDTLLAIEQKGAYSHLQLNEAIQKGRLDGRDAALLTEIVYGTVQRRDTLDYYLA 61 Query: 64 KLMARPMTGKQRT----VHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 P K R V L+ + LYQ++Y R+P AA+ E VE A + L+ Sbjct: 62 -----PFLRKARRLEPWVRVLLRLTLYQMVYLDRVPDRAAVFEAVEIAKRRGHRGIASLV 116 Query: 119 NGVLRQFQRQQEELLAEFNASDARYL----HPSWLLKR-LQKAYPEQWQSIVEANNQRPP 173 NGVLR R+ + + + R HP WL++R +Q+ E+ + E N + P Sbjct: 117 NGVLRAIGREGLPSIEAVDDAGKRLALATSHPEWLVRRWIQQYGYEEAARMCETNLRPPQ 176 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 R+NR + + L L GM+ P P+A+R E H F GW+T+QD Sbjct: 177 STARVNRLRATVEEALERLRAEGMQVIPGHVAPEAIRAEKGNLAHT-ETFRAGWLTIQDE 235 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKR 292 S+ L P GE +LD CAAPGGKTTHI E + +VVAVDI E ++ + KR Sbjct: 236 SSMLVARALDPAPGERVLDCCAAPGGKTTHIAERMDGRGEVVAVDIHEHKVMLIEQQAKR 295 Query: 293 LGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+ D R + + FDR+L+DAPC+ GVIRR P+IK+ + I L + Sbjct: 296 LGLDNVATLSLDSRRLGERFAPESFDRVLVDAPCTGFGVIRRKPEIKYTKGKDAIAALVE 355 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR----TADAELCE-TGTPEQ 406 +Q IL A P LK GGTLVY+TC+V EEN I FL DA L E P + Sbjct: 356 IQQAILRAAAPLLKKGGTLVYSTCTVEREENEEAIARFLADHPDFFLDASLAERMPKPVR 415 Query: 407 PGK-----QNLPGAEEGDGFFYAKLIKK 429 P Q LP + DGFF A+L K+ Sbjct: 416 PHVKGGMLQLLPHHFDSDGFFIARLRKR 443 >UniRef50_A0LEK0 Sun protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEK0_SYNFM Length = 449 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 143/414 (34%), Positives = 208/414 (50%), Gaps = 21/414 (5%) Query: 33 QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQ-LLYT 91 +++ ++D+ALL EL +GVLR +LDW I++L V L+ + LYQ L+ Sbjct: 33 HERLEERDRALLTELVYGVLRWQGRLDWHIDQLSRTRPEKIDPAVRILLRLALYQILMLD 92 Query: 92 RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ-FQRQQEELLAEFNASDARYL-----H 145 RIP HAA+ E V A + L +NGVLR+ +R+ + E +Y+ H Sbjct: 93 RIPDHAAVNEAVNMAKTTQPAYLVKFVNGVLREALRRRSRWIWPEAGEEPGKYIAVTTAH 152 Query: 146 PSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD 204 P W ++RL + E+ I ANN PM LR+N S D+ L E G+ P Sbjct: 153 PIWYVERLLHEFGFEETLDICNANNTVAPMTLRVNALKTSIDTILQWCAEHGIDAEPSGV 212 Query: 205 YPDAVRLE-TPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTH 263 P AVRL + + DG V VQD ++Q T +AP+ GE +LDLCA GGK+TH Sbjct: 213 VPTAVRLSGLRRDLAETSIYRDGLVQVQDEASQIVSTLVAPRAGERVLDLCAGFGGKSTH 272 Query: 264 I-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD 322 + + + +VVAVD +L + N +R G++ + + E FDR+LLD Sbjct: 273 LGILMGDRGEVVAVDNSAWKLEELRKNARRQGLRIIKPRTADLFEFSPGTEDLFDRVLLD 332 Query: 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 APCS G +RR+PDIKW R +D ++Q E+LD +K GG LVY+ C++ EEN Sbjct: 333 APCSGFGTLRRNPDIKWRRHLKDPRRFGRIQKEMLDHAARFVKPGGALVYSACTLFQEEN 392 Query: 383 SLQIKAFLQRTADAEL----------CETGTPEQPGKQNLPGAEEGDGFFYAKL 426 + F D ++ C G P + P + DGFF A+L Sbjct: 393 DAVAEHFAASHPDWQIEPVGPDLPDACR-GMASGPFFRTWPHRHQVDGFFAARL 445 >UniRef50_B1HQE5 Ribosomal RNA small subunit methyltransferase B n=5 Tax=Bacillaceae RepID=B1HQE5_LYSSC Length = 453 Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 149/446 (33%), Positives = 225/446 (50%), Gaps = 30/446 (6%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNIL---PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 N+R AA ++ V++ Q+ SN+L + K+ KD+ALL EL +G L+ LD+ + Sbjct: 12 NVRD-AALSILLAVDKNQAYSNLLLNETIKRHKIEAKDRALLTELTYGTLQHKMTLDYYL 70 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL---I 118 + + V +L+ + LYQ+ Y TRIP HAA+ E VE A KR +G+ + Sbjct: 71 EPFIRGSI---DHWVRWLLRISLYQMQYLTRIPAHAAVNEAVEIA---KRRGHRGIASTV 124 Query: 119 NGVLRQFQRQQEELLAEFNASDARYL----HPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 NG+LR RQ + + R HP WL++R Y E ++ NN P Sbjct: 125 NGILRSVLRQGVPSINDIENPIERLAIETSHPIWLVQRFVNNYGLEVATGMLHENNVPPI 184 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 +R+N T + + +A L+E G+ P+ + + P F++G +T+QD Sbjct: 185 QTVRVNTTKVTVEQAMAELEEEGLTAKQSDVIPECLHVTNGQPART-NAFKEGHITIQDE 243 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKR 292 S+ L P G +LD+CAAPGGKTTH+ E+ E ++A D+ +L + N +R Sbjct: 244 SSMIPANVLKPSPGMRVLDMCAAPGGKTTHLAEIMKNEGSILATDLHPHKLDLIDHNTER 303 Query: 293 LGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+ DGR ++ + +D IL+DAPCS GV+RR PDIK+ +R+ D+ L Sbjct: 304 LGLDIIETAPIDGRKAPEFLQAESYDAILVDAPCSGLGVMRRKPDIKYTKREEDLENLQT 363 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE-----TGTPEQ 406 +Q +LDA LK G LVY+TC+V +EN + AFL + E + T E+ Sbjct: 364 IQLALLDAATKVLKIKGKLVYSTCTVDKQENEGTVNAFLAAHPEMEAIQLESLPTKLAEK 423 Query: 407 PGK---QNLPGAEEGDGFFYAKLIKK 429 Q P DGFF A KK Sbjct: 424 QANGMLQVFPQDFGSDGFFVAAFRKK 449 >UniRef50_A3DCX8 Sun protein n=5 Tax=Clostridium RepID=A3DCX8_CLOTH Length = 455 Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 139/457 (30%), Positives = 231/457 (50%), Gaps = 39/457 (8%) Query: 3 KQRNLRSMAAQAVEQVVEQGQ----SLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQL 58 K +R A + + + E+G SL+ L Q+ D+A + ++ +G L+ + Sbjct: 6 KVDKVRETALKILYDINEKGAYSNISLNKYLNG--QEFESIDRAFITDIVYGTLKWQYTI 63 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 D+LI K + + + ++ +G+YQL+YT +IP AA E+V+ A Sbjct: 64 DYLIEKFSSVKIKKISPWIFNILRMGIYQLIYTDKIPFFAACNESVKLAAKYGHAASSKY 123 Query: 118 INGVLRQFQRQQEEL-LAEFNASDARYL-----HPSWLLKRLQKAYPEQW-QSIVEANNQ 170 +N VLR R +E L + N A YL HP W++K + E++ + +++ANN+ Sbjct: 124 VNAVLRNIARNKENLPYPDRNNDTAHYLSVKYSHPVWMVKDWLDCFGEEFTEGLLKANNE 183 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD-AVRLETPAPVHALPGFEDGWVT 229 P +R+N S+ + +L + G + + Y D A+ + P+ V + F G+ Sbjct: 184 VAPFTVRVNDLKISKKELVDILTKDGFE-VENGKYLDEALIIRNPSAVQKMDAFAKGYFQ 242 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYD 288 VQD S+ L P+ GE ILD+C+APGGK+THI ++ V++ DI E ++ + Sbjct: 243 VQDESSMLVAKVLDPKPGETILDVCSAPGGKSTHIAQIMKNRGTVISRDIHEHKIKLIEQ 302 Query: 289 NLKRLGMKATVKQG------DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRR 342 +RLG++ + DG+ ++ DR+L+DAPC+ G+IRR PDIKW + Sbjct: 303 AKERLGLEIIKTEVFDAAVLDGKLI------EKIDRVLVDAPCTGFGIIRRKPDIKWSKN 356 Query: 343 DRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG 402 D E+ LQ +IL ++K GG LVY+TC++ PEEN ++ F++ D L + Sbjct: 357 SEDKAEIVSLQHKILSTASKYVKDGGVLVYSTCTLEPEENEKAVERFIEENKDFYLEDIT 416 Query: 403 T-------PEQPGK---QNLPGAEEGDGFFYAKLIKK 429 E GK Q P + DGFF A++ K+ Sbjct: 417 EFLPDALRKESAGKGYIQLYPNIDGIDGFFIARMRKR 453 >UniRef50_Q2RK22 Sun protein n=3 Tax=Clostridia RepID=Q2RK22_MOOTA Length = 457 Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 148/459 (32%), Positives = 225/459 (49%), Gaps = 39/459 (8%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQ----SLSNILPPLQQKVSDKDKALLQELCFGVLRTLS 56 +K + R A Q + +V E+G +L +L + +++AL EL + ++ Sbjct: 4 IKPAVSAREAALQVIYRVTEEGAYAGLALDEVLK--SAGLDGRERALATELAYSAIKAWG 61 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLK 115 LDW + + +P+ + ++ +G QLLY RIPP AA+ ETVE A Sbjct: 62 TLDWALGLFLRQPLEKLPPWIRCVLRLGATQLLYVPRIPPRAAIYETVELAKKYGHRGTT 121 Query: 116 GLINGVLRQFQRQQEELLAEFNASDA------RYLHPSWLLKR-LQKAYPEQWQSIVEAN 168 GL+NGVLR RQ++ L +D RY HP WL++R L++ ++ + + A+ Sbjct: 122 GLVNGVLRHLDRQKDALPYPDWKTDPAGYLALRYYHPRWLVERWLEEFGYQETEYLCRAD 181 Query: 169 NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWV 228 N+ PP R+N +D A L G P P+ + +E + A P F++G Sbjct: 182 NEPPPTIARVNTLKTRKDVLAARLQAEGATVRPARYAPEGLVVEGLGALEASPSFQEGLF 241 Query: 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVY 287 VQD +Q L P +G ++D AAPGGKTTH+ ++ A ++A D+ RL + Sbjct: 242 YVQDEGSQLVSHALHPDSGAWVIDASAAPGGKTTHLAQLMADRGTILACDVHRGRLDLIA 301 Query: 288 DNLKRLGMKAT------VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR 341 N +RLG+ ++ RYP+ D +L+DAPCS GV+RR PD +W + Sbjct: 302 ANCRRLGVTCVRTVLVDARELGERYPAA------ADYLLIDAPCSGLGVLRRRPDARWRK 355 Query: 342 RDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD--AELC 399 ELA+LQ IL LK GG LVY+TC++LPEEN ++ FL+R + + Sbjct: 356 EAPRTRELARLQLAILMGARQALKPGGVLVYSTCTLLPEENQEVVREFLERAGEFRPDSL 415 Query: 400 ETGTPEQPGK----------QNLPGAEEGDGFFYAKLIK 428 E P P Q LP DGFF A++ K Sbjct: 416 EPWLPVLPPDLMVTARQGWVQFLPQRHGTDGFFIARIKK 454 >UniRef50_B9XT31 Sun protein n=1 Tax=bacterium Ellin514 RepID=B9XT31_9BACT Length = 444 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 148/439 (33%), Positives = 230/439 (52%), Gaps = 32/439 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R +A + + + + Q + N+L + ++S D+ L QEL +G++R L+WLI+ Sbjct: 16 RQIAVRVLTERLSQEEYTENLLEIELSRARLSAPDRGLCQELVYGIVRWQETLNWLID-- 73 Query: 66 MARPMTGKQRT--VHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 R G+++ + L+ +GLYQ+ + RIP HAA+ ETVE A + G +N VL Sbjct: 74 --RKTEGRRQKPEMQVLLQLGLYQMFWLDRIPNHAAVHETVEIAKELGFVAQSGFVNAVL 131 Query: 123 RQFQRQQ---EELLAEFNASDAR--YLHPSWLLKR-LQKAYPEQWQSIVEANNQRPPMWL 176 R + R++ E+LL E + + Y HP W+ +R L++ E ++E NN + Sbjct: 132 RGYLRERVETEKLLEEVKIAQPQIGYSHPEWVYQRWLERYGAEHTAKLMEWNNTPARTYA 191 Query: 177 RINRTHHSRDSWLALLDEAGMKGFP-HADYPD---AVRLETPAPVHALPGFEDGWVTVQD 232 RIN A + G+K P D+ + LE+ P+ L F+DG+ +QD Sbjct: 192 RINTLKADAAKVTAQWETEGVKFIPRQYDWIEDGLIFELESHPPLAGLKSFKDGFFYIQD 251 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLK 291 S + L + +LDLCAAPGGKTT I + + Q+VA DI + RL+ + +N Sbjct: 252 PSTLLSVRELDVKAAHSVLDLCAAPGGKTTMIAQQMQNRGQIVAQDISDDRLALLRENYV 311 Query: 292 RLGMKATVKQGDGRYPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 RLG+ V P+ Q+FDR+L+DAPCS TGV+RR D++W + ++ L Sbjct: 312 RLGVTCVVA---SIAPNAVIANPAQRFDRVLIDAPCSNTGVMRRRVDLRWRIQPEEVERL 368 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK 409 + Q E+L P LK G +VY+TCS+ PEENS ++ FL D EL + + Sbjct: 369 RETQLELLRRAAPRLKPNGIMVYSTCSLEPEENSQVVQQFLSENPDFEL-------KSER 421 Query: 410 QNLPGAEEGDGFFYAKLIK 428 Q P + DG + AKLI+ Sbjct: 422 QLTPFGNDVDGAYTAKLIR 440 >UniRef50_C6MTY9 Sun protein n=1 Tax=Geobacter sp. M18 RepID=C6MTY9_9DELT Length = 449 Score = 208 bits (530), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 144/432 (33%), Positives = 225/432 (52%), Gaps = 23/432 (5%) Query: 19 VEQGQSLSNILPP---LQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQR 75 +E+ +S ++IL + + D+ LL EL +GVLR LD +I + + + Sbjct: 17 IEKEKSFADILIDHELSKDMIKGADRGLLTELVYGVLRRQGTLDHIIGQFSKQRTDKLEL 76 Query: 76 TVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLA 134 V L+ +GLYQ + R+P AA+ ETV+ A + P+ G IN +LR R ++ + Sbjct: 77 YVLLLLRLGLYQCFFLDRVPVSAAVNETVKLAKELA-PRASGFINAILRNADRNRDNISY 135 Query: 135 EFNASD------ARYLHPSWLLKR-LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 A + RY HP+WL + ++ E +++ A ++ PP +R+N SR++ Sbjct: 136 PDRAENPVGYLAVRYSHPAWLTSQWCEQLGVEGAEALAAAMSEPPPFTIRVNTLRISREA 195 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 +A L E G+ PD +RL + LP F DG TVQD S+Q +L+P+ G Sbjct: 196 LMARLAEEGISCSETRWSPDGIRLNQSGQITRLPSFRDGLFTVQDESSQLAPLFLSPEKG 255 Query: 248 EHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGR 305 + +LD C+APGGKTT I + + ++ A D++ ++L + + RLG+ + D Sbjct: 256 DRVLDACSAPGGKTTQIAQLMGNSGEIYACDVNHKKLRLIKETCDRLGITSVRTFTMDAT 315 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 PS E F RIL+DAPCS GVIRR+P+ KW + D+ + A+ Q IL+ + +L Sbjct: 316 SPSPAIKEVTFQRILVDAPCSGLGVIRRNPEGKWSKSPDDLLQQARTQVTILENLCKYLD 375 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTAD--AELCETGTP-------EQPGKQNLPGAE 416 GTL+YATCS +EN I FL+ + AE T P E+ ++ P + Sbjct: 376 KSGTLLYATCSTSVQENEYVIDTFLREHPEFVAEDLRTLFPEFAPLFTERGFFRSWPHRD 435 Query: 417 EGDGFFYAKLIK 428 DGFF A+L K Sbjct: 436 GMDGFFAARLKK 447 >UniRef50_B2A2K5 Sun protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2K5_NATTJ Length = 462 Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 143/458 (31%), Positives = 236/458 (51%), Gaps = 33/458 (7%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSN-ILPPLQQKVS--DKDKALLQELCFGVLRTLSQLD 59 K ++ R +A A +++ Q Q+ SN +L L K +DKAL + +G L+ +D Sbjct: 2 KIKSSRELAFVAYTRII-QDQAYSNLVLNQLLGKTDLLAQDKALASRITYGTLQWQGLID 60 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 + + L RP++ +L+ +G YQ+L+ R+PP A++ ETV+ A + + Sbjct: 61 YYLKTLSHRPLSKLSNKALFLLRMGAYQILFLDRVPPSASVNETVKVAHRRTHKGIANFV 120 Query: 119 NGVLRQFQRQQEELLAE------FNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 NG+LR R+++++L N +Y HP W++K Y ++ SI++ NN Sbjct: 121 NGILRNLIRKKDQILLPSRDQDLLNYLSVKYSHPYWMVKLWYDKYGLDKTISIMDQNNST 180 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P +R+N+ S ++ L+ G++ + DA+ ++ ++ F G+ VQ Sbjct: 181 PEEAIRVNKLLTSLENLKNELEMTGIQSRLSSKIDDALLVDNLGDLNNNTLFNCGYFQVQ 240 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNL 290 D ++ PQ G++I+DLC+APG KTTH+++ + + ++AVDI E RL V + Sbjct: 241 DINSMVVSHLCDPQQGDNIIDLCSAPGSKTTHLVQLIDGQGSILAVDIHEHRLKLVKEAC 300 Query: 291 KRLGMK-ATVKQGDG----RYPSQWCGEQ---QFDRILLDAPCSATGVIRRHPDIKWLRR 342 +RL + VKQ DG Q +Q QFD L+DAPCS G +R+ P++KW Sbjct: 301 RRLQVNNVNVKQADGTKLISRDQQENNKQLKGQFDLCLIDAPCSGLGTLRKRPELKWTIS 360 Query: 343 DRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD------- 395 ++D+ L+ LQ ++L A +K GGTLVY+TC++ P+EN QI FL+ D Sbjct: 361 EQDLNSLSTLQGKLLKAGSQLVKPGGTLVYSTCTINPQENEDQINDFLKNHPDFVMESPR 420 Query: 396 AELCETGTP-----EQPGKQNLPGAEEGDGFFYAKLIK 428 A L E Q P GDGF+ A++ K Sbjct: 421 AILKEDTLQGGMILSNNSLQYFPELNLGDGFYGARMKK 458 >UniRef50_A8MH88 Sun protein n=7 Tax=Clostridiaceae RepID=A8MH88_ALKOO Length = 445 Score = 207 bits (527), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 125/408 (30%), Positives = 209/408 (51%), Gaps = 25/408 (6%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAA 98 D+ LL EL +GVL +D ++++ + L+ +G+YQLL+ R+P AA Sbjct: 38 DRNLLTELVYGVLENQIYIDHVLSQFSNFQLDKMNPYTLNLLRLGIYQLLFLDRVPSFAA 97 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLA------EFNASDARYLHPSWLLKR 152 + ETV + + + G INGVLR QR + + RY HP WL++ Sbjct: 98 VNETVNLSKKYCK-KTTGFINGVLRNVQRNRNNIKMPKPEKNRIKYLSIRYSHPEWLVQL 156 Query: 153 LQKAYPEQW-QSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 K + + + +++ANN++P ++LRIN S + LL+ G +A+ + Sbjct: 157 FLKHFDVNFVEELLKANNKKPDLYLRINTLKISVADCIQLLEAEGYVVEQSKIVEEAIVV 216 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-E 270 + + ++ G++ +QD S+ LAP+ GE ++D+C+APGGKTTHI ++ + Sbjct: 217 KGIHNIEKTDFYKKGYIQIQDISSMLVAKALAPKEGELVMDICSAPGGKTTHIAQLMNNK 276 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGE---QQFDRILLDAPCSA 327 +++A DI E +L + KRLG+ + ++ E + D++L+DAPCS Sbjct: 277 GKIIARDIHEHKLKLIDRTAKRLGIHIIQTE---KFSGDHLDESFIHKADKVLVDAPCSG 333 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 G+IRR P+IK+ + +DI + +LQ +IL ++K GTLVY+TC++ PEEN ++ Sbjct: 334 LGIIRRKPEIKYRKEAQDITSIVELQYKILKTAAQYVKIEGTLVYSTCTINPEENDHIVQ 393 Query: 388 AFLQRTADAELCETGT---------PEQPGKQNLPGAEEGDGFFYAKL 426 FL++ + L P + Q P DGFF AK Sbjct: 394 KFLEQHQNYTLVHLNNEYQDIILQEPNKATIQLYPNINGTDGFFIAKF 441 >UniRef50_Q3AC21 Sun protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AC21_CARHZ Length = 440 Score = 207 bits (526), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 146/446 (32%), Positives = 228/446 (51%), Gaps = 44/446 (9%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINK 64 NLR + + + +V + ++ +LP L ++ K DK + EL +GVL+ L LD++ K Sbjct: 2 NLRELVIKTLVEVEKNNSYVNLLLPKLIANLAKKEDKDFVVELTYGVLKQLKLLDYMAGK 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQ--LKGLINGV 121 L+ + ++ I VGLYQL + ++P +AA+ ETVE A+KR G++NGV Sbjct: 62 LLKKRSKLPPFVIN-AIRVGLYQLYFLDKVPTYAAINETVE---AVKRNYRGFTGVVNGV 117 Query: 122 LRQFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 LR F R++EE+ + + SD Y HP W++KR Y + I++ NN +P + Sbjct: 118 LRNFIRRREEI-TKIDVSDEVEYLAIAYSHPEWMVKRWLNQYGYTKTVEILKYNNHQPNL 176 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADY-PDAVRLETPAPVHALPGFEDGWVTVQDA 233 LRIN S ++ LL+E + F Y P+ V + V LPG+++G +QD Sbjct: 177 TLRINTLKISPKAYCDLLNEKNI-NFKQLPYLPEGVVILDKVGVKELPGYDEGLFYIQDT 235 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKR 292 + + P+ +D CAAPGGK+TH+ ++ ++ A D+ RL + +N R Sbjct: 236 GSMFIAYLINPEPNSVGIDACAAPGGKSTHLAQLMGNKGIIYAFDVHPGRLKLIEENAHR 295 Query: 293 LGMKAT---------VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 LG+ +K DG P+ W IL D PCS TGV+ R PD +W + + Sbjct: 296 LGINIIRCLLGDATRLKLPDGVNPN-W--------ILADVPCSGTGVLARKPDARWQKSE 346 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE--- 400 +I +L+Q Q EIL + L G LVY+TCS+ PEEN ++ FL++ + L + Sbjct: 347 EEIIKLSQYQLEILTNLSKLLPPEGILVYSTCSIEPEENEGVVENFLRKNPNFVLVKPPE 406 Query: 401 ----TGTPEQPGKQNLPGAEEGDGFF 422 G + L E GDGFF Sbjct: 407 WFFNLGIVKNNYYLRLLPGEIGDGFF 432 >UniRef50_B0KA07 Sun protein n=11 Tax=Thermoanaerobacterales RepID=B0KA07_THEP3 Length = 444 Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 137/421 (32%), Positives = 228/421 (54%), Gaps = 40/421 (9%) Query: 34 QKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-R 92 Q++ + D+ +EL FGV+ LD++++ + + +T+ +L M GLYQLLY + Sbjct: 32 QELKEIDRGFTKELVFGVIERKYTLDFILSFFVKK--APDLKTMIFLEM-GLYQLLYMDK 88 Query: 93 IPPHAALAETVEGA---IAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDAR------Y 143 +P +AA+ ETV A + IKR IN VLR + R++E ++ D + Y Sbjct: 89 VPSYAAINETVNIAKKVLGIKRA---NFINAVLRNYDREKERVIFPDKERDLKQYLKVTY 145 Query: 144 LHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGM---KG 199 +P W+++RL Y E+ ++++++ N+RP + R+N + LLD G+ KG Sbjct: 146 SYPDWIVERLLNNYDEEKAEALLKSLNERPEICYRVNTLKIDIEDLKRLLDSDGIAYKKG 205 Query: 200 FPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGG 259 + + + + ++ P H L +++G++ +QD ++ L P+ GE ++D+CAAPGG Sbjct: 206 Y-YLEEALYIYIKNPES-HQL--YKEGFIYIQDEASMLVSKILNPKEGETVIDVCAAPGG 261 Query: 260 KTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQQFD 317 KTTHI ++ +VVA D+ RL + +N KRLG+ + D + ++ E+ D Sbjct: 262 KTTHIAQLMKNNGKVVAFDLHPHRLELIKENCKRLGITNVKTEAFDSTFVNKKYLEKA-D 320 Query: 318 RILLDAPCSATGVIRRHPDIKWLRRDR-DIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 ++L D PC+ G+IR+ PDIK R +I EL + Q +ILD+ ++K GG LVY+TC+ Sbjct: 321 KVLADVPCTGIGIIRKKPDIKLKNYTRKEISELIETQYKILDSSSKYVKKGGFLVYSTCT 380 Query: 377 VLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEG-----------DGFFYAK 425 + EEN I FL+ D +L + E P N+ A G DGFF +K Sbjct: 381 IGKEENQNVIMKFLKEHPDFKLVDI-KAEMPSGLNIETASLGYVQTTPLEHEIDGFFISK 439 Query: 426 L 426 L Sbjct: 440 L 440 >UniRef50_P94464 Ribosomal RNA small subunit methyltransferase B n=24 Tax=Bacillales RepID=RSMB_BACSU Length = 447 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 155/453 (34%), Positives = 235/453 (51%), Gaps = 34/453 (7%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLD 59 K+ ++R +A +A+ ++ EQ Q+ SN+L ++SD+++ LL EL +G L+ LD Sbjct: 2 KKTSVRDIALEALIKL-EQNQAYSNLLLKSVIKSNELSDQNRGLLTELVYGTLQNKIALD 60 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 +++ + +P K + L+ + LYQ+ Y +IP AA+ E VE A + + Sbjct: 61 YMLKPFINKPQKVKPWVIQ-LLRLSLYQMEYLEKIPDRAAIHEAVEIAKIRGHKGIASFV 119 Query: 119 NGVLRQFQRQQEELLAEFNASD--ARYL-----HPSWLLKRLQKAYP-EQWQSIVEANNQ 170 NGVLR QR E + F+A + R L HP WL+K AY E + I + Sbjct: 120 NGVLRSIQR---EGVPSFDAIEDPVRRLATETSHPEWLVKEWADAYGFEAAEKICRIHLI 176 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL--ETPAPVHALPGFEDGWV 228 P LR+N+ R L + G++ DAV+L T A H F++G V Sbjct: 177 PPKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGTIAGTHF---FQNGEV 233 Query: 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVY 287 ++QD S+ L P++ E +LD CAAPGGK+ HI E+ + V ++D+ + ++ + Sbjct: 234 SIQDESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVKLIK 293 Query: 288 DNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 + RLG+ + D R + +QFDRIL+DAPCS GVIRR PD+K+ ++ D Sbjct: 294 EAADRLGLTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPDMKYTKKPDDS 353 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE---LCETGT 403 LA++Q IL I P +K GGTLVY+TC++ EN I AF+Q D E E Sbjct: 354 ARLAEIQLSILREIAPLVKKGGTLVYSTCTMDRTENDEVIHAFIQEHPDFEPDLSLEKRL 413 Query: 404 PEQ------PGK-QNLPGAEEGDGFFYAKLIKK 429 PE+ G+ Q LP DGFF + KK Sbjct: 414 PEKVRPFVRDGRLQILPHYFGTDGFFICSMRKK 446 >UniRef50_B1YIQ1 Sun protein n=2 Tax=Exiguobacterium RepID=B1YIQ1_EXIS2 Length = 446 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 135/417 (32%), Positives = 207/417 (49%), Gaps = 28/417 (6%) Query: 33 QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV----HYLIMVGLYQL 88 ++ +S D L EL +G L LD+++ P KQ+ + L+ + +YQL Sbjct: 31 KRAISKADVGLYTELVYGTLSRELTLDYILE-----PFLTKQKKLDPFMRPLLRMSVYQL 85 Query: 89 LY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYL--- 144 Y RIP HA + E VE A +P + ++NGVLR R + + ++ R Sbjct: 86 FYLDRIPDHAVINEAVEIAKTRGKPHIAKVVNGVLRNVLRTGKPDFSAIPSTVDRISIET 145 Query: 145 -HPSWLLKRLQKAYPEQ--WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFP 201 HP WL+KR + + E+ W+ + NN+ P+ +R+NRT + + LL+E G+ P Sbjct: 146 SHPVWLVKRWLELFGEEETWK-MCRLNNEPAPVTVRVNRTRTDQQEAIVLLEEQGVIAKP 204 Query: 202 HADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKT 261 PD + + V E G++++QD S+ L Q +H+LD CAAPGGK Sbjct: 205 AHAAPDGLEI-VSGSVQQTDLLERGYLSLQDESSMLVAAALGAQPTDHVLDSCAAPGGKA 263 Query: 262 THILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQQFDRIL 320 HI E +VA+D+ ++ + RLG+ + D R FDRIL Sbjct: 264 MHIAEGLATGSLVALDLHPHKVKLLEKQATRLGLHNVQAEALDARQAGTRFETASFDRIL 323 Query: 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE 380 +DAPCS GVIRR PDIKW +R D+ +L +Q +IL+A+ P +K GT VY+TC++ P Sbjct: 324 VDAPCSGLGVIRRKPDIKWTKRPEDLTQLPVIQRQILEAVLPLVKPDGTFVYSTCTMDPL 383 Query: 381 ENSLQIKAFLQ---------RTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 EN Q + L +T E ++ E+ + LP + DGF+ A K Sbjct: 384 ENEQQTEFILSQGFVFDETFKTRMPEAVQSLIGERAELKLLPTSLGTDGFYIAAFKK 440 >UniRef50_A0Q113 Sun protein n=35 Tax=Clostridium RepID=A0Q113_CLONN Length = 443 Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 131/437 (29%), Positives = 221/437 (50%), Gaps = 33/437 (7%) Query: 17 QVVEQGQSLSNIL---PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGK 73 +VV + SNI+ + K+ DKDK L+ E+ +G ++ +D ++N + + + Sbjct: 13 EVVFNKNAYSNIVLRQTLNKNKIDDKDKGLITEIVYGTIKYKYTIDTILNNFLKKGIKSL 72 Query: 74 QRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL 132 V ++ + +YQ+ + +IP AA+ E VE A K L+NGVLR + R ++ Sbjct: 73 DSYVLNILRITVYQIKFLDKIPNFAAVNEAVEIAKKEKSVGASKLVNGVLRNYLRNLDK- 131 Query: 133 LAEFNASDA------RYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSR 185 +N + +Y + WL+ L K Y E + I++ N+RP + +R+N Sbjct: 132 -KYYNDKNLVETLCFKYSYDKWLVNMLIKQYGNEIAEDILKGLNERPAVTVRVNNLKTDH 190 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 D + L+E G P+A+ + + P F++G +TVQD SA + + Sbjct: 191 DEAFSNLEEYGYDVEEGYICPEAIVINKGKSIEKNPLFKEGKITVQDESAMLVAPSIDAK 250 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKRLGMK--ATVKQG 302 G +LDLC+APGGKTTHI E+ +V A DI E +LS V +N KRLG+ + + Sbjct: 251 EGATVLDLCSAPGGKTTHISEIMNNTGIVKAFDIHENKLSLVKENAKRLGIDNISCAEMD 310 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 ++ + E D +L+D PCS G+IR+ P+IK+ + + ++ +Q +I++ Sbjct: 311 ASKFNKEL--ENSADMVLIDVPCSGLGIIRKKPEIKYTKDIKSTKDIVAIQKKIMENAAK 368 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK-QNLPGAEEG--- 418 ++K GTL+Y+TC++ EEN I F+++ + ++ P G N+ E G Sbjct: 369 YVKKEGTLLYSTCTINKEENEKNINWFIKKFPEYKV----EPLFYGNMSNIIYNENGTVT 424 Query: 419 -------DGFFYAKLIK 428 DGFF AKL K Sbjct: 425 ILPNKYMDGFFIAKLKK 441 >UniRef50_D1VSE3 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE3_9FIRM Length = 430 Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 134/436 (30%), Positives = 214/436 (49%), Gaps = 25/436 (5%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQ-KVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R A ++ V +G L L ++Q +SD+D ++ + GV+R + LD++I Sbjct: 2 NNIRQKALFIIDNVYNKGAFLEEQLNIIKQSNISDRDFTFIKNITTGVIRNRTYLDYVIK 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + ++ + +YQ + +IP ++ + E+V+ A +N +L Sbjct: 62 INSKIRFKKIHKIIAIILEMAIYQYYFLDKIPNYSIVDESVKLAKLYGNKGSSSFVNAIL 121 Query: 123 RQFQRQQEELLA---EFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRI 178 R + +E++ Y HP + K + Y E +++++ANNQ P +R+ Sbjct: 122 RNIVSKDKEVVKIEDSIENLSVYYSHPKFYTKYFYENYGVELTKNLLKANNQEPDFVIRV 181 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHAD--YPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 N +D LL + + F D PD++ +E P + F +G+ QD S+ Sbjct: 182 NTLKTKKDHLYKLLKD---ENFNVIDGLVPDSLIIENPKNIFDTQAFREGFFYAQDFSSI 238 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTH---ILEVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 L P+ ILDLCAAPGGK+TH ILE Q+VA D +L + DN KRL Sbjct: 239 KVSQILNPKKNSTILDLCAAPGGKSTHLGAILE--NTGQIVACDKSLYKLDLIKDNAKRL 296 Query: 294 G---MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 G +K ++ +Y + + E +FD L+DAPCSA G+ R+ PDIKW R DI LA Sbjct: 297 GVSNIKVSINDA-SKYNNDF--EDKFDYCLVDAPCSAIGLYRKKPDIKWNRSLEDIKNLA 353 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQ 410 Q+Q I++ ++K GG L+Y+TCS+ EN IK FL R + ++ T E Sbjct: 354 QIQKNIINNAGRYVKKGGVLIYSTCSLSYSENEGVIKEFLDRNKNYKIL---TIEGKDIL 410 Query: 411 NLPGAEEGDGFFYAKL 426 L + DGF KL Sbjct: 411 KLFPFDNYDGFSICKL 426 >UniRef50_B0A9Y2 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0A9Y2_9CLOT Length = 441 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 133/445 (29%), Positives = 225/445 (50%), Gaps = 30/445 (6%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLD 59 K RNL A V +E+ Q+ SN+ K + ++D+ E+ +GV+ LD Sbjct: 2 KSRNL----AYKVLFDIEKNQNYSNMAINKHFKDCNLDNRDRGFATEIIYGVVENKIYLD 57 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 ++I+KL V L+ +G+YQ+L+ + +AA+ ETV + G + Sbjct: 58 YIIDKLSKIKSNKLNLKVKILLRMGIYQILFLDSVSDYAAVNETVNLTKKLDNRS-AGFV 116 Query: 119 NGVLRQFQRQQEELLAEFNASDA------RYLHPSWLLKRLQKAYPEQW-QSIVEANNQR 171 N VLR RQ+E++ E D +Y + W+++ + ++ + ++EAN +R Sbjct: 117 NAVLRNVIRQKEDI-GEVKIKDTVDNLATKYSYNKWIVRNWISNFGREFTEDLLEANTER 175 Query: 172 PPMWLRINRTHHSRDSWLALLDE--AGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 P ++LR+N +RD + LL+E + P D +A+++ + ++ G T Sbjct: 176 PSIYLRVNTLKTTRDELIKLLEEQEVNCEKVPFMD--EAIKVNNLKNIENNELYKKGLFT 233 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEA-QVVAVDIDEQRLSRVYD 288 VQD S+ L PQ +LD+C+APGGKTTHI + + QV++ DI E ++ + + Sbjct: 234 VQDISSMLVGKILNPQKDTKVLDVCSAPGGKTTHIATLMENSGQVISRDIFEHKIKLIQN 293 Query: 289 NLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 ++ RLG+K Q +FD +L D PCS G+I+R P+IK+ + +I + Sbjct: 294 SVNRLGLKNVDVQLFDALNLDKDSIDKFDSVLADVPCSGLGIIKRKPEIKY-KEKEEIKD 352 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT----- 403 L +LQ +IL ++K GGTL+Y+TC++ +EN +++FLQ +L + Sbjct: 353 LPKLQKQILQNAAKYVKVGGTLIYSTCTIQDDENIEVVESFLQSNKRFKLEKIENINIDL 412 Query: 404 -PEQPGKQNL-PGAEEGDGFFYAKL 426 E G + P DGFF AKL Sbjct: 413 ENEDKGYLKIYPNVHGMDGFFIAKL 437 >UniRef50_Q2LRX5 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRX5_SYNAS Length = 471 Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 142/449 (31%), Positives = 225/449 (50%), Gaps = 29/449 (6%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPP-LQQKVSDK--DKALLQELCFGVLRTLSQLDWLINK 64 RS+A + ++++ G +L L+ + D D+ LL L +G LR +LDW+I + Sbjct: 25 RSLAVEILDRIDTTGAFAEPLLDAFLRDHLLDSAPDRHLLTSLVYGTLRMRGRLDWIIQQ 84 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L + Q + ++ LYQ L+ RIP A + E VE A ++ P + L+N +LR Sbjct: 85 LYQGRFSSMQGGIRNILRTALYQFLFMERIPAFALVDEAVELA-KLRYPGREKLVNALLR 143 Query: 124 QFQRQ---QEELLAEFNASDARYL-----HPSWLLKRLQKAY-PEQWQSIVEANNQRPPM 174 R+ E +F + ++ HP WL++R Y E+ +S+ ANNQ PP+ Sbjct: 144 NAVRKVSANELSYPDFQKTPVEHIAVMHSHPPWLVRRWLSVYGTERCRSLCMANNQVPPV 203 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHA--LPGFEDGWVTVQD 232 +R+N R + +L+ G + PDA+ + P P H +G +QD Sbjct: 204 AIRVNSLKADRSTLKEILEHEGFTVSESSFSPDALLITDP-PRHLRLTSTSREGLFILQD 262 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLK 291 ++Q +AP GE ILD+C G KTTH+ + + + +++AVD+ +L + Sbjct: 263 EASQLIGRLVAPAAGEAILDVCCGTGVKTTHLASLMSNQGRILAVDLYPAKLEALNRLSS 322 Query: 292 RLGMKAT-VKQGDGR-YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 R+G+ ++Q D + FDRIL+DAPCS G +RR+P+IKW + R +P Sbjct: 323 RMGISNIEIRQADASTMEDETAFRNMFDRILVDAPCSGLGTLRRNPEIKWRLQPRALPSY 382 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ--------RTADAELCET 401 ++LQ +IL+ L GG LVY+TC++LPEEN L I FL R +DA Sbjct: 383 SRLQEQILNRAAAFLHRGGCLVYSTCTILPEENELLIGKFLSRHDEFRQIRLSDASFAYP 442 Query: 402 GTPEQPG-KQNLPGAEEGDGFFYAKLIKK 429 ++ G + P DGFF A L K+ Sbjct: 443 TLVDENGFFRTAPDTSGMDGFFAALLTKE 471 >UniRef50_B4CZF1 Sun protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZF1_9BACT Length = 410 Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 138/397 (34%), Positives = 208/397 (52%), Gaps = 32/397 (8%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAAL 99 D+A E FGVLR LS+LD+LI +L + + R V + +GLYQ+ + R PHAA+ Sbjct: 38 DRAFFMETFFGVLRNLSRLDFLIGQLREGRIDPQTRAV---LRLGLYQIFHMRTAPHAAV 94 Query: 100 AETVE-GAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNA--SDARYLHPSWLLKRLQKA 156 E+V G A +GL+N +LR+ R++E L ++ A S R HP +L+ R ++ Sbjct: 95 NESVALGGRA------RGLVNAILRRALREKEALESDLLAASSAVRTSHPEFLIARWEEV 148 Query: 157 Y-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPA 215 + PE + + E NN+ + +R N + L + P +P A+++E Sbjct: 149 FGPEATRILCEWNNEPADVHVRANGLRVTVGELL----RSSTSAMPSPVHPLAIKVE--- 201 Query: 216 PVHALPG-FEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQV 273 H P G VQD S LAPQ GE +LD CAAPGGKTT++ ++ + ++ Sbjct: 202 --HIPPSWIAMGLCYVQDPSTLLSCDLLAPQPGETVLDACAAPGGKTTYLAQLMHDQGRI 259 Query: 274 VAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIR 332 +A D+ + R++R+ +NLKRLG+ A + D FDRIL+DAPCS TGVIR Sbjct: 260 IACDLYDSRVARLRENLKRLGVTIARAIRHDCMQAGPPLDPDSFDRILVDAPCSNTGVIR 319 Query: 333 RHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 R D++W + D + Q +L LK GGTLVY+TCS+ PEEN L ++ Sbjct: 320 RRVDVRWRLTEEDFIRMPAQQLALLRRTATLLKPGGTLVYSTCSLEPEENDLLVEKVCAA 379 Query: 393 TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 E+ ++ LP + DG F AK +++ Sbjct: 380 IPSLRFVES-------RRALPFVDRIDGAFAAKFVRE 409 >UniRef50_A6NUS8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUS8_9BACE Length = 447 Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 133/409 (32%), Positives = 206/409 (50%), Gaps = 22/409 (5%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIP 94 + +D AL LCFGVL+ LD+ I K + V + +G+YQ+ + T+IP Sbjct: 39 LDSRDAALATRLCFGVLQNRLLLDFYIGKFSTTRPEKMEIKVRNALRLGVYQMAFMTKIP 98 Query: 95 PHAALAETVE-GAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNAS-----DARYLHPSW 148 +AA+ E+VE K P+ G++NGVLR R + L + S RY HP W Sbjct: 99 HNAAVNESVELTKKHCKNPRAAGMVNGVLRNVSRNIDRLPVIESGSREEYLSIRYSHPLW 158 Query: 149 LLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD 207 L++ E+ ++++EA+N +PP+ +IN + + L L EAG++ PH D Sbjct: 159 LVREFTALLGSEEAEALLEADNGQPPITAQINTCRATMEQTLERLAEAGVEAQPHPWLAD 218 Query: 208 AVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKT-THILE 266 + L + L F +G +QD +A+ + P+ G +LD CAAPGGKT + Sbjct: 219 CLVLSGTGNLEHLTAFREGLFYIQDPAARLAVEVADPKPGMKVLDACAAPGGKTFASAIR 278 Query: 267 VAPEAQVVAVDIDEQRLSRVYDNLKRLG---MKATVKQGDGRYPSQWCGEQQFDRILLDA 323 + E ++ + DI + + +RLG +K V G P+ E FD ++ D Sbjct: 279 MGGEGEIQSCDIHAHKEKLIQAGAERLGFNCIKTAVMDGKKHRPAF---ENAFDVVIADV 335 Query: 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 PCS G+IR+ PDI++ + + L +QS ILD + ++K GG L+YATC++L EN Sbjct: 336 PCSGLGIIRKKPDIRY-KDPEPLEGLPAVQSAILDNVATYVKPGGVLLYATCTLLERENG 394 Query: 384 LQIKAFLQRTADAELCETGTPEQPGKQN------LPGAEEGDGFFYAKL 426 ++ FL R D L + PE G+ + P DGFF AKL Sbjct: 395 DVVRGFLDRNKDFTLEKFQLPEPLGRADNGMFTFWPQRHGTDGFFIAKL 443 >UniRef50_Q1DCG5 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Cystobacterineae RepID=Q1DCG5_MYXXD Length = 438 Score = 200 bits (509), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 143/448 (31%), Positives = 219/448 (48%), Gaps = 38/448 (8%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNIL-------PPLQQKVSDKDKALLQELCFGVLRTLSQL 58 N R++A Q + +V L+ +L PP +D AL+ EL +G R L Sbjct: 2 NARALAIQVLARVRATDAYLNVVLDTQLSESPP----KDPRDAALVTELTYGATRRQLAL 57 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLI 118 D+ I + R + + V + +G YQ+ +TR+P AA+AETV+ + + G Sbjct: 58 DYAITRFADRKLDALEDKVLAALRIGAYQIFHTRVPARAAVAETVQALKEVGLTRAAGFT 117 Query: 119 NGVLRQFQRQQEELLAEFNAS----DARYLHPSWLLKR-LQKAYPEQWQSIVEANNQRPP 173 N +LR+ L + R HP WL++R L++ E+ ++++ A+NQ P Sbjct: 118 NAILRKLAALPAPPLPPASDVALHLSVRESHPQWLVERWLRQFGRERAEAMLVADNQAPA 177 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 + +R N +RD+ LA L E G+ P + L + V + G+ +G VQD Sbjct: 178 VVVRANTAKVTRDALLAQLQEMGVDAKATTVSPVGITLPSVGRVEDVYGYAEGLWQVQDE 237 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 +AQ + A +LD CAAPGGK+ H A VVAVD+ +L ++ +RL Sbjct: 238 AAQLVGVYGAIPETARVLDACAAPGGKSCH---QAQSHDVVAVDLHAHKLRKIEAEARRL 294 Query: 294 GM----KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 G+ KA +P +W GE F L+DAPCS G +RRHP++++ R++ DI L Sbjct: 295 GLQPRLKAYAHDAAEPFPEEW-GE--FHAFLVDAPCSGLGTLRRHPELRYRRKEEDISRL 351 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK 409 A LQ IL+ + GG LVYA C++ P+E Q++ FL+ + P PG Sbjct: 352 ATLQRRILENCQDAVPPGGLLVYAVCTMEPQEGQDQVEMFLRSHPE---WTAEPPVLPGL 408 Query: 410 Q---------NLPGAEEGDGFFYAKLIK 428 + LPG E DGFF A+L K Sbjct: 409 KLPMSQAYLRTLPGPEGFDGFFAARLRK 436 >UniRef50_Q3A7Z0 Sun protein n=2 Tax=Desulfuromonadales RepID=Q3A7Z0_PELCD Length = 451 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 132/372 (35%), Positives = 195/372 (52%), Gaps = 11/372 (2%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLL-YTRIPPHA 97 +D+AL EL +GVLR +LD+ + +L +P+ + V L+ +G YQ+L RIP HA Sbjct: 40 RDRALATELVYGVLRYRGRLDFALQQLCRKPLAKVEPAVLNLLRLGCYQILQLDRIPNHA 99 Query: 98 ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDA-RYLH-----PSWLLK 151 A+ ETVE A +K + G ING+LR RQ +L D YL P WL Sbjct: 100 AVFETVELARRLKLQRATGFINGILRGLVRQAAQLPWPDRQRDPLDYLEHVLSLPRWLAA 159 Query: 152 R-LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVR 210 R L + E+ ++ +A + P +R N R++ LA L+ + P P+ + Sbjct: 160 RWLDEFGAEEACALAQAMLKPAPYAIRTNTLKIQREALLATLNASDCDAVPTRFVPEGIY 219 Query: 211 LETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE 270 + H L G +G +QD ++ L PQ GE ILD CAAPGGKTTH+ + Sbjct: 220 IRQGETRH-LSGHTEGIFQLQDQASMLISHLLNPQPGERILDACAAPGGKTTHMAALTDN 278 Query: 271 -AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSAT 328 A++VA+D+ QR+ + RLG + D + FDRIL+DAPCS Sbjct: 279 RARIVALDLHPQRVDLITRGANRLGCQGIEGHAWDLTGVPDFLEPASFDRILVDAPCSGL 338 Query: 329 GVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKA 388 GV+RR+P+I+W R+ D+ E+A++Q IL + P L+ GG LVY+ C+ PEE I+A Sbjct: 339 GVLRRNPEIRWRRKPADLKEMARIQRAILGNVAPLLRPGGRLVYSLCTFSPEETQNVIRA 398 Query: 389 FLQRTADAELCE 400 F + C+ Sbjct: 399 FTNEHPEFTRCD 410 >UniRef50_D0MH27 Sun protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MH27_RHOM4 Length = 453 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 133/397 (33%), Positives = 207/397 (52%), Gaps = 17/397 (4%) Query: 46 ELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEG 105 E GV R LD+L+ + + + ++ +GLY+LL+T PP+AAL E VE Sbjct: 54 EYVAGVTRWRRWLDFLLAQNYRGRYDSMEPRLRQILRLGLYELLFTDTPPYAALNEAVEL 113 Query: 106 AIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASD------ARYLHPSWLLKR-LQKAYP 158 A + RPQ ++N VLR RQ++ L + D RY HP+W+++R L + P Sbjct: 114 ARRLVRPQAGAVVNAVLRSLLRQRD-FLPQPQTGDPVEDLAIRYSHPTWIVQRWLARYGP 172 Query: 159 EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH 218 ++++ NN+RP +R+ SR L L + G++ P D +R++ P+ Sbjct: 173 ADTEALLRYNNERPWFGVRVRTDRISRHVVLHRLADRGLEAEPSPVLDDFIRVQRLGPLL 232 Query: 219 ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVD 277 E G + VQD SA + L P E I+D CAAPGGKTT+I + +V+A D Sbjct: 233 EDRLIEKGLLAVQDESAGLAVRLLDPHPDETIVDACAAPGGKTTYIATRMRDHGRVLAFD 292 Query: 278 IDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPD 336 + +R + + G+ + V + D R S+ E Q DR+LLD PCS GV+ + D Sbjct: 293 VHPKRTELIRRAALQQGLTSIVAEALDLRQVSERYPELQADRVLLDVPCSGLGVLAKRAD 352 Query: 337 IKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR---- 392 ++W RR ++ EL +LQ E+L+A ++ GG LVY+TC++ PEEN +++AFL R Sbjct: 353 LRWHRRPEELDELVRLQDELLEAAARLMRPGGILVYSTCTIEPEENEARVRAFLARHPEF 412 Query: 393 ---TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 ADA + ++ P + DG F A+L Sbjct: 413 TVERADAWVPAEMVTDEGFFATWPPRDRMDGAFAARL 449 >UniRef50_B8FHH2 Sun protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHH2_DESAA Length = 455 Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 137/446 (30%), Positives = 233/446 (52%), Gaps = 26/446 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R AA+ ++++ Q L +L K ++ KD+AL+ L +GVLR ++DW+I+ Sbjct: 11 RITAARILDRLESGDQVLDVVLDRALDKEPGLTRKDRALVMALVYGVLRNRGRIDWIISS 70 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + Q + ++ +G++QLL+ R+PP A+ +VE A + +NG+LR Sbjct: 71 FSKTKLKKIQPEILNILRMGVFQLLFLDRVPPALAVDSSVEMAKKAAPVFVSKFVNGLLR 130 Query: 124 QFQRQQEEL-LAEFNASDARYL-----HPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWL 176 +R+ L L +F + + +P W++KR K + E+ + +A N+ P+ + Sbjct: 131 NVERKGRGLQLPDFAKDPLKAICVAESYPEWMVKRWIKRFGAEETLELCKAGNRIAPITI 190 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPD-AVRLETP-APVHALPGFEDGWVTVQDAS 234 R+N +RD + + +K D+P A+ P PV LPGF +G +VQDA+ Sbjct: 191 RVNSLAATRDEAADEIRDQ-VKNLELHDWPPMALSFSAPLVPVFELPGFSEGKFSVQDAA 249 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRL 293 +Q L P+ GE +LD CA G KT+HI ++ +++A D++ +L ++ + + RL Sbjct: 250 SQMTALCLDPRPGEKVLDACAGLGSKTSHIAQLMENTGEILAADLEPGKLKKLEEEMARL 309 Query: 294 GMKATVKQGDGRYPSQWCGE-QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + + VK + + E Q FD++L+DAPC+ GVIRR+PD KW + I + A+L Sbjct: 310 KV-SIVKTHALDFTRELSLEPQGFDKVLVDAPCTGLGVIRRNPDSKWSKTLNSIHKHAKL 368 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-------- 404 Q IL ++ GG ++Y+ CS+ PEE IKAFL+ D L + P Sbjct: 369 QGMILSRAAELVRPGGLILYSVCSMEPEETDGVIKAFLRNNEDFTLEPSPLPKDGDQTML 428 Query: 405 -EQPGKQNLPGAEEGDGFFYAKLIKK 429 EQ + P + DGFF A++ ++ Sbjct: 429 DEQGCMRTFPHRQGMDGFFAARMRRR 454 >UniRef50_B6JAF7 SUN protein n=6 Tax=Alphaproteobacteria RepID=B6JAF7_OLICO Length = 446 Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 148/446 (33%), Positives = 218/446 (48%), Gaps = 43/446 (9%) Query: 8 RSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R +AA ++ V+ + ++L + L P + +SD+D+AL++ L VLR L +L+ Sbjct: 18 RRIAADIIDGVLHKRRTLDDQLEGAAQHPALKSLSDRDRALMRRLVATVLRRRGTLAYLL 77 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP-QLKGLINGV 121 ++L+ R + +M+G Q+L+ +P HAA+ +V A +R + GL+N V Sbjct: 78 SRLLDRGVPSDAPRAQSALMIGAAQILWMDVPDHAAVDLSVRLVQADRRAAKYAGLVNAV 137 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINR 180 LR+ R+ L+ E ++D P WL R KAY E +++ A PP+ L + Sbjct: 138 LRRCAREGIPLIDE--STDEMIDLPPWLATRWIKAYGEDTARAMARAIGHEPPLDLTVK- 194 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 ++W L + P VR V LPGF +G VQDA+A Sbjct: 195 --SDSENWATRLHG---ETLPTG----TVRTLLHGSVTMLPGFSEGAWWVQDAAAALPAR 245 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 G+ + DLCAAPGGKT + + A+V AVD RL+R+ +N RLG++AT Sbjct: 246 LFGDIAGKPVADLCAAPGGKTAQLAQAG--AKVTAVDRSAGRLARLKENFARLGLEATYV 303 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 D ++W FD ILLDAPC ATG IRRHPD+ WL+ + D+ L+ LQ+ +L Sbjct: 304 AADA---TEW-EAGPFDAILLDAPCMATGTIRRHPDVAWLKNEADLDALSALQARLLRKS 359 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL-------- 412 LK GGTLVY TCS+ PEE I A L+ + E G L Sbjct: 360 VTLLKPGGTLVYCTCSLEPEEGEQAIAALLEAEPQMKRRPVEASELAGLSELISPMGDVR 419 Query: 413 ----------PGAEEGDGFFYAKLIK 428 P DGF+ A+L+K Sbjct: 420 TLPCHLQHDDPKLSGLDGFYAARLVK 445 >UniRef50_C4V0R0 rRNA SAM-dependent methyltransferase RmsB n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0R0_9FIRM Length = 449 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 134/410 (32%), Positives = 209/410 (50%), Gaps = 18/410 (4%) Query: 35 KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RI 93 +++++D+ L EL +G ++ LD++I + +A + Q + L+ +G YQ+ + +I Sbjct: 43 QMTERDRRFLTELVYGTVKAGETLDYMIRRYVA-DLKKAQPPIRELLRLGFYQIFFMDKI 101 Query: 94 PPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYL-----HPSW 148 P A VE A +NGVLR R+ + A DAR L HP W Sbjct: 102 PSSAVCHTAVELAKKHGGKGAASFVNGVLRTALREPKRA-ALPQGHDARSLALRMQHPVW 160 Query: 149 LLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD 207 +++R + Y E+ +++ +N+ P+ LR N SR + + L AG++ P+ Sbjct: 161 MVERWLRDYGSERTETLCRCDNESAPLTLRTNTLRTSRTALIERLTAAGVRAEASLRVPE 220 Query: 208 AVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE- 266 +V L + AL +G VQD S+ L + G ++D CAAPGGKTTHI + Sbjct: 221 SVLLHAHGALDALAPLREGLAQVQDESSMLVAHVLGAEPGMTVIDACAAPGGKTTHIAQR 280 Query: 267 VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPC 325 + ++ A DI E++L R+ N +RLG+ Q D R G DR+L+DAPC Sbjct: 281 MENRGRIWAFDIHEEKLRRIMRNAERLGISIIETQLLDAREVGAHYGVCA-DRVLVDAPC 339 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 S GV+RR PD +W + D+ L LQ IL + +K GG LVY+TC++ EN+ Sbjct: 340 SGLGVLRRKPDARWRKTPSDVKTLPPLQLAILASAARTVKQGGVLVYSTCTMERSENTAV 399 Query: 386 IKAFLQRTADAELCETGT--PEQPGK----QNLPGAEEGDGFFYAKLIKK 429 ++AFL+ D L ETG PEQ Q +P DGFF A++ ++ Sbjct: 400 VEAFLRGHEDFVLEETGAFLPEQKTAERMVQIMPETGGPDGFFIARMRRR 449 >UniRef50_B4RCX9 rRNA methyltransferase RsmB n=8 Tax=Alphaproteobacteria RepID=B4RCX9_PHEZH Length = 598 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 140/360 (38%), Positives = 187/360 (51%), Gaps = 31/360 (8%) Query: 80 LIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGLINGVLRQFQRQQEELLAEFNA 138 ++ +G QLL + P HAA++ TV+ A + K Q KGL+N VLR R+ +L Sbjct: 254 VLRLGAAQLLVLKTPAHAAVSATVDLAASQKGGQAFKGLVNAVLRGLSREPPDL------ 307 Query: 139 SDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMK 198 SD L P WL R + A+ + + A P + ++ +L+ + Sbjct: 308 SDPDLLAPQWLAARWRAAFGPEAARAMAAMVADEPATDVTPKDSADAEALGQMLEGRVLP 367 Query: 199 GFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPG 258 G +VR V A PGF +G VQDASA LA + E LDLCAAPG Sbjct: 368 G-------GSVRAGLKGEVQAWPGFAEGRWWVQDASAAIPARLLAVKADETALDLCAAPG 420 Query: 259 GKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDR 318 GKT + A A+V AVD RL RV +NL R G+ A V Q D ++W ++FD Sbjct: 421 GKTLQL--AAAGARVTAVDKAAGRLKRVSENLARTGLSAEVVQADA---AEWPDRRRFDA 475 Query: 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 +LLDAPCSATG RRHPD+ W+ DIP+LA LQ+ +LDA +K GG LVY CS+ Sbjct: 476 VLLDAPCSATGTYRRHPDVLWVASPADIPKLATLQARLLDAAARRVKAGGRLVYCVCSLE 535 Query: 379 PEENSLQIKAFLQRTAD-----AELCETGTPEQPGKQN-----LPGAEEG--DGFFYAKL 426 PEE Q++AFL+R+ + E E G PE N LP +G DGFF A+L Sbjct: 536 PEEGEAQVEAFLKRSPEFAPEPVEPGEGGAPEASRLPNGTLRILPHHLDGGTDGFFIARL 595 >UniRef50_Q21DD2 Fmu (Sun) n=13 Tax=Rhizobiales RepID=Q21DD2_RHOPB Length = 450 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 142/450 (31%), Positives = 219/450 (48%), Gaps = 48/450 (10%) Query: 8 RSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R +AA ++ V+ + ++L + L P + +SD+D+AL++ L +LR L L ++ Sbjct: 18 RRIAADILDGVLHKHRTLDDQLEGAAAHPGLKTLSDRDRALMRRLVATILRRLGTLGHVL 77 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP-QLKGLINGV 121 ++++ R + +++G Q+L+ +P HAA+ +V + +R + GL+N V Sbjct: 78 SRMLDRGLPTDAPRAQSALLIGAAQILWMEVPDHAAVDLSVRLVQSDRRAAKYAGLVNAV 137 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINR 180 LR+ R+ + L+ E P WLL R Y + ++I A + P + L + Sbjct: 138 LRRCAREGQPLIDEVQGQSLDV--PPWLLARWSAHYGADTARAIARAIGEEPSLDLSVK- 194 Query: 181 THHSRDSWLALLDEAGMKGFPHADY--PDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 ++W + L H + VR V LPGF+DG VQDA+A Sbjct: 195 --SDAEAWASRL---------HGEVLPTGTVRTLLQGSVKMLPGFDDGQWWVQDAAAALP 243 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 G+ + DLCAAPGGKT + A V A+D + R++R+ +NL RLG+ A Sbjct: 244 ARLFGDLTGKSVADLCAAPGGKTAQLCNAG--AWVTAIDRSQSRVARLRENLGRLGLPAE 301 Query: 299 VKQGDGRYPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 D ++W G FD +LLDAPCS+TG IRRHPD+ WL+++ DI LA Q + Sbjct: 302 TAVADA---AEWPGNGGDGFDAVLLDAPCSSTGTIRRHPDVAWLKQEADIGALAAQQQRL 358 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL---- 412 L LK GGTLVY TCS+ PEE + I A L + + E G +L Sbjct: 359 LHKAVSLLKPGGTLVYCTCSLEPEEGEVAIAALLAGNSGMRRAPVDSSEVAGLGDLITPD 418 Query: 413 ------------PGAEEG--DGFFYAKLIK 428 P G DGF+ A+L+K Sbjct: 419 GALRTLPCHLPHPDPRLGGLDGFYAARLVK 448 >UniRef50_C4ZEV6 Sun protein n=4 Tax=Clostridiales RepID=C4ZEV6_EUBR3 Length = 469 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 127/437 (29%), Positives = 215/437 (49%), Gaps = 24/437 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 + R +A + + ++ E+G +L + Q +S +D+A + L G + + QLD++I Sbjct: 40 DTRELALEMLIEINERGAFSHIVLRSVLDKYQYLSKQDRAFMTRLVDGTIEYMLQLDYII 99 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGV 121 + + + + L+ + +YQ+ Y +P A E V+ A K QL G +NGV Sbjct: 100 DSFSKTKVRKMKPFIRNLLRMSVYQIKYMDAVPDSAVCNEAVKLAKRHKFAQLSGFVNGV 159 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINR 180 LR R + + +F+ RY P W++ R AY E+ + I +A + + + +R N Sbjct: 160 LRNIARNIDSV--QFDTLSIRYSMPQWIVDRFVAAYGEKKAEEIFKAFHNKSTISIRTNL 217 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 T + D A L+ G+ + A + ++ L F DG VQD S+ Sbjct: 218 TRCTPDELRATLEAEGVTVTAVDELNYAFVISGFDYLNGLQSFRDGLFYVQDISSMLVAQ 277 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMK--- 296 AP+ G++++D+CAAPGGK+THI E+ V A D+ + ++ + +N+ R G+ Sbjct: 278 TAAPKKGDYVIDVCAAPGGKSTHIAELLQGSGHVFARDLTDNKVDMIEENIDRHGLNNMS 337 Query: 297 -----ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 ATV D + D ++ D PCS GV+ R DI++ + EL Sbjct: 338 AEVWDATVFDADS--------AGKADILICDLPCSGLGVLGRKKDIRYKMTPGSVDELVV 389 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQN 411 LQ +ILD + ++K G LVY+TC++ EN ++ F+++ + EL ++ KQ Sbjct: 390 LQRQILDTVHTYVKPNGVLVYSTCTIDEAENEDNVRWFIEKHPEFELDKSFAEGTGMKQI 449 Query: 412 LPGAEEGDGFFYAKLIK 428 LPG DGFF A+ IK Sbjct: 450 LPGEHGSDGFFIARFIK 466 >UniRef50_Q0AKI8 Fmu (Sun) domain protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKI8_MARMM Length = 433 Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 152/436 (34%), Positives = 215/436 (49%), Gaps = 46/436 (10%) Query: 18 VVEQGQSLSNIL--PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQR 75 V++Q ++L L P +SD+D+A + + R L Q ++N L++RP+ Sbjct: 18 VMKQRRTLEAALEHTPEFAAMSDRDRAFARAITATTFRRLGQTRTVLNGLLSRPLHETSE 77 Query: 76 TVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP-QLKGLINGVLRQFQRQQEELLA 134 L++ G QLL+ PHA ++ TVE A A +LKGLIN VLR+ R+ E L Sbjct: 78 GAQALLITGATQLLWMDGAPHAVVSSTVELADARSDARKLKGLINAVLRRVDREGRERLK 137 Query: 135 EFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLD 193 D P WL + AY P + A PP+ L + + +R+ W LD Sbjct: 138 PTLPRDN---LPDWLRDSWRAAYGPGTLSRMANAITVAPPLDLTV-KDPDTREHWARALD 193 Query: 194 EAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDL 253 + P+ ++R +T V ALPG+ +G QDA+A T L G ++DL Sbjct: 194 ATIL---PNG----SLRRDTVGDVRALPGYREGAWWAQDAAAAIPATLLTLGPGSSVIDL 246 Query: 254 CAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGE 313 CAAPGGKT + A A V A+D+ E+RL RV +NL R G+ AT+ GD + Sbjct: 247 CAAPGGKTMQL--AATGADVTALDLSEKRLERVRENLGRTGLSATLVAGDA---LTYKPA 301 Query: 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 373 Q D +LLDAPC+ATG +RRHP+ W++R D +A+LQ E++ A LK GG LV Sbjct: 302 QPVDAVLLDAPCTATGTLRRHPEAAWIKRADDTGRMARLQDEMIKAAAAMLKPGGQLVLC 361 Query: 374 TCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPG------------------A 415 TCS+ PEE +A R A +P QP L G A Sbjct: 362 TCSLQPEEG----EALAGRVAGRHRQLKESPIQP--DELAGVESALTPAGWVRLTPALWA 415 Query: 416 EEG--DGFFYAKLIKK 429 E+G DGFF A+ K+ Sbjct: 416 EQGGMDGFFIARFTKR 431 >UniRef50_Q2S463 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S463_SALRD Length = 427 Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 136/399 (34%), Positives = 196/399 (49%), Gaps = 18/399 (4%) Query: 45 QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVE 104 +EL GV R LD+++ + + + ++ +GLY+LL+ P HAA+ E VE Sbjct: 25 RELVAGVTRQRRWLDFVLGEAYHGDYDSMEHRLQEILRLGLYELLFQSTPTHAAVDEYVE 84 Query: 105 GAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDA-----RYLHPSWLLKR-LQKAYP 158 A RP L+NGVLR R +E + DA RY HP+W+++R L + Sbjct: 85 LAKQALRPGAGNLVNGVLRTIDRDREHIPTPDTGDDANDLALRYSHPTWMVQRWLDRFGL 144 Query: 159 EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH 218 ++ ++ ANN+RP +RIN S A LDE + +RL+ + Sbjct: 145 DETTELLRANNRRPMYSVRINPLRTSEADVAAWLDEHDVVNVDSPYLDRYLRLKRLQALI 204 Query: 219 ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVD 277 A +DG V VQD SA + L PQ GE ++D CAAPGGK H + + AVD Sbjct: 205 AGDLLDDGHVAVQDESAGLVVQLLDPQPGETLIDGCAAPGGKAMHAAARMEGTGTIYAVD 264 Query: 278 IDEQRLSRVYDNLKRLGMKATVK--QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHP 335 DEQRL RV + G V+ D R + Q DR+LLD PC+ GV+ + Sbjct: 265 RDEQRLERVETAAEAQGASEMVEAETADLRAWAARPEPPQGDRVLLDVPCTGMGVLAKRA 324 Query: 336 DIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD 395 ++W R D+ E+A+LQ E+LDA ++ GG LVY+TC+ PEEN +++AFL R D Sbjct: 325 GLRWRRSMEDLEEMAELQDELLDAAAQLVRPGGLLVYSTCTTEPEENERRVEAFLARH-D 383 Query: 396 AELCETGTPEQPGKQ--------NLPGAEEGDGFFYAKL 426 E+ P + P DG F A+L Sbjct: 384 GFAVESAEGHVPDEMVSDAGFLATFPHRHRMDGAFAARL 422 >UniRef50_C4FT85 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT85_9FIRM Length = 457 Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 140/423 (33%), Positives = 211/423 (49%), Gaps = 35/423 (8%) Query: 33 QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRT--VHYLIMVGLYQLLY 90 Q ++ D+ LL L +G ++ LD+ + + GK+ + L+ + YQ+LY Sbjct: 43 QSELKPVDQGLLVNLVYGSIQHRLTLDFYLEPFI----KGKKLEPWIRSLLRMTAYQMLY 98 Query: 91 T-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ----EELLAEFNASDARYLH 145 RIP HAA+ E V A L GL+NGVLR F+RQ+ + + A +Y Sbjct: 99 LERIPDHAAINEAVNIAKLNGHAGLAGLVNGVLRNFRRQELRSLDSVTDPIEALSIQYSV 158 Query: 146 PSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD 204 W++ LQK Y + ++ + NQRP + RI + RD LA L AG + Sbjct: 159 APWIVALLQKQYDQASLADLLASLNQRPRLTARIQAHPNERDQILAQLRAAGYQVEAGNL 218 Query: 205 YPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI 264 P A+ + P F+ G +T+QD S+ P G+ +LD C+APGGK TH+ Sbjct: 219 SPYAIE-SLDGRIIESPAFQAGRLTIQDESSMLVAPIGRPVAGQRLLDACSAPGGKATHM 277 Query: 265 LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGE---------QQ 315 + + A+DI + +L V +++RLG+ Q +G S + Sbjct: 278 AFLLQNGHLDALDISQAKLDLVAGHMERLGLS----QQEGLTISLHATDALDFMPPSGTL 333 Query: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 +D I LDAPCS G++RR P+IK+ ++ DI L+ LQS++LD + LK GGTLVY+TC Sbjct: 334 YDIIYLDAPCSGLGLMRRKPEIKYTKQASDIEALSMLQSQLLDHVASLLKPGGTLVYSTC 393 Query: 376 SVLPEENSLQIKAFLQRTADAELCETGTPEQPGK---------QNLPGAEEGDGFFYAKL 426 ++ EN Q+KAFL R +D +L G E G + LP DGFF A++ Sbjct: 394 TLAQAENQDQVKAFLARQSDFQLSPIGPEEVQGASVLTADGMIEVLPQDYLTDGFFIARM 453 Query: 427 IKK 429 K Sbjct: 454 TKS 456 >UniRef50_A8SLL0 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLL0_9FIRM Length = 434 Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 121/435 (27%), Positives = 215/435 (49%), Gaps = 16/435 (3%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +R +A + + ++ ++ + +N+L + +SD D L+E+ +G L LD++I KL Sbjct: 1 MRKLAIEILCEIKDENSNSTNLLNKSTKNISDLDSKFLREIVYGTLENRIYLDYIIKKLC 60 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + + ++ + +YQ+++ +IP A + E V K + +NG LR F Sbjct: 61 KLRIKKFNPYILNILRISIYQIIFMDKIPEFAIINEAVNLTKVFKLKKFSSFVNGSLRNF 120 Query: 126 QRQQEELL-----AEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRIN 179 R +E+ + +E A +Y ++K L Y E+ I+E + +P +RI+ Sbjct: 121 LRNKEDFMKIKVESEEEAISIKYSANMDIVKLLLGDYGREETIKILENSMTKPHFAIRIS 180 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 + + + L++ G K +E P + F+ G TVQD + Sbjct: 181 SFEKTEEKVVKDLEKDGYKLKKSEISKLTYFVENPTNILETESFKSGDFTVQDVGSILTG 240 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 LAP+ +LD+C+APGGKT H+ ++ ++ A DI + +L ++ +N KRL ++ Sbjct: 241 EILAPKENSKVLDICSAPGGKTCHLAFQMKNSGEIFANDIVKSKLKKIEENCKRLNVQNV 300 Query: 299 --VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 + Y ++ ++QF IL D CS GV+ R P+IK R I E+ +LQ +I Sbjct: 301 KLLNFDASIYKEEY--KEQFGYILCDVICSGIGVMDRKPEIKLFRSQETIDEIIELQRKI 358 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET---GTPEQPGKQNLP 413 D +LK G +VY+TCSVL EN +K FL++ + ++ + G E+ K LP Sbjct: 359 FDNAVEYLKDKGEIVYSTCSVLKCENEENVKYFLEKHKNLKIKDVEFLGKSEKFIKL-LP 417 Query: 414 GAEEGDGFFYAKLIK 428 ++ +GFF K +K Sbjct: 418 EKQKHNGFFIIKFVK 432 >UniRef50_C0XM65 rRNA SAM-dependent methyltransferase RmsB n=3 Tax=Lactobacillus RepID=C0XM65_LACHI Length = 444 Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 123/408 (30%), Positives = 212/408 (51%), Gaps = 16/408 (3%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIP 94 +SD DKAL + +GV++ L++ + + + + V L+ +YQL Y R+P Sbjct: 38 MSDVDKALFTNIVYGVIQHRMTLEYQLVPFL-KDSEKTEDWVKELLYTAMYQLEYLDRVP 96 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ----EELLAEFNASDARYLHPSWLL 150 A E+++ A ++ + + G+L Q R+ +++ +Y P WL+ Sbjct: 97 KRAIFDESIKIAKSMGHDGTRRFVTGILHQMDRKGVREPDKIKDPVKKISIKYSVPEWLV 156 Query: 151 KRLQKAYPEQ-WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAV 209 ++ +Q + ++ NQ P +R N+ ++ L +AG + + + Sbjct: 157 SLIEGQLGKQKADQVFKSLNQTPKQSVRFNKAKTTKSKLTDQLTQAGFQTEDSLVAGEGI 216 Query: 210 RLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP 269 ++ VH+ FE+G +T+QD SA + ++ Q + ILD C+APGGKTT I Sbjct: 217 IVDKGQVVHS-AFFENGLLTIQDESAMLPVESMSIQPDDLILDACSAPGGKTTQIAANLK 275 Query: 270 EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG--DGRYPSQWCGEQQFDRILLDAPCSA 327 +V+A+DI + +L V N KRLG+ V+ D R + ++ FD IL+DAPCS Sbjct: 276 NGRVIALDIHQNKLKNVIRNAKRLGVDGVVETQALDARKVDEKFSDEMFDHILVDAPCSG 335 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 G++RR P+I++ + DI L+Q+Q +IL+A+ P +KTGGT+ Y+TC+++ +EN IK Sbjct: 336 FGLMRRKPEIRYDKTLADINHLSQIQLQILEAVAPKVKTGGTITYSTCTIVQQENQEVIK 395 Query: 388 AFLQRTADAELCETG-----TPEQPGKQNL-PGAEEGDGFFYAKLIKK 429 FL D ++ T T ++ G N+ P DGFF L++K Sbjct: 396 QFLDAHPDFQIEPTKTDLNLTTDENGMINIYPDDFGSDGFFVCSLVRK 443 >UniRef50_A8ZUK3 Sun protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUK3_DESOH Length = 468 Score = 194 bits (492), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 131/412 (31%), Positives = 198/412 (48%), Gaps = 21/412 (5%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHA 97 +D+AL+ L +GVLR + LD+ I P+ V ++ +GL+QL + RIP A Sbjct: 56 RDRALVTTLVYGVLRWRNTLDYTIVHFSRTPLQRMDPAVLNILRLGLFQLRFLDRIPDFA 115 Query: 98 ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAE------FNASDARYLHPSWLLK 151 A+ +V+ + +L G +NG+LR R E A P W+++ Sbjct: 116 AINSSVDLSKQAGLGRLSGFVNGLLRSSTRHPGEPDPPDMDKDPVQALCVTKSFPEWMIR 175 Query: 152 R-LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVR 210 R + + E+ + + N PP+ +R+N + + A L + P P+AV Sbjct: 176 RWIARFGIEETVQLCDFLNTVPPITVRVNGLRAAPEQVAASLAQEAAGVTPGRHAPEAVS 235 Query: 211 LETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP 269 +P PVH + F GW VQD +AQ P+ G+ +LD CA GGKT H+ + Sbjct: 236 FSSPKVPVHEMTAFGAGWFQVQDEAAQLIGLLTDPRPGQRVLDACAGLGGKTGHLARLME 295 Query: 270 -EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSA 327 + ++VA D D +L R+ + RLG+ D P Q FDR+L D PCS Sbjct: 296 NQGRIVAADRDTAKLERLAGEMTRLGITNVRPMTLDMLVPEQLKDAGGFDRVLADCPCSG 355 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 TGVIRR+PD KW ++D+ L Q +L + H++ GG LVYA CS+ PEEN ++ Sbjct: 356 TGVIRRNPDTKWRLSEQDLARLQNDQIAMLTNLADHVRDGGLLVYAVCSMEPEENDAVVQ 415 Query: 388 AFLQRTADAEL---------CETGTPEQPG-KQNLPGAEEGDGFFYAKLIKK 429 +FL+R D + G + PG + P DGFF +L K Sbjct: 416 SFLKRRPDFAIDTGVAADVPAVAGFTDDPGFFRTFPWRHGMDGFFGVRLKKN 467 >UniRef50_B2IXU2 Sun protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IXU2_NOSP7 Length = 487 Score = 194 bits (492), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 155/488 (31%), Positives = 232/488 (47%), Gaps = 66/488 (13%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVS--DKDKALLQELCFGVLRTLSQL 58 M R L +A + V + +L +L QKV+ D+D+ L+ EL +G +R L Sbjct: 1 MTNPRQLAFIALRDVHKGAYADVALDRVL----QKVNLPDRDRRLVTELVYGSVRRQRTL 56 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 D LI++ + + + ++ +G YQL Y RIP AA+ TV+ A L G Sbjct: 57 DTLIDQFAKNKSHQQPQDLRTILHLGFYQLRYQERIPASAAVNTTVQLAKENGFSGLTGF 116 Query: 118 INGVLRQFQR-------------------QQEELLA-----------------------E 135 +NG+LRQ+ R +++ LL E Sbjct: 117 VNGLLRQYLRKAGEQGGRGAGGQRSRGAEEKDSLLVPVPQPPVPSTQAPVLNFDPLQLPE 176 Query: 136 FNASDARYLH--PSWLLKR-LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALL 192 LH P W+++ L++ + + + E NQ P + LRIN S + A L Sbjct: 177 NPVERLGILHSFPDWIIQVWLEQLGLTETEQLCEWMNQSPTIDLRINPLCTSIEEVEAAL 236 Query: 193 DEAGMKGFPHADYPDAVR-LETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHIL 251 G+ D P A+R + + LPGF++GW TVQDASAQ L PQ GE ++ Sbjct: 237 QSVGLLVRRIPDLPQALRFMGNTGSIQKLPGFKEGWWTVQDASAQLVSHLLDPQPGEVVI 296 Query: 252 DLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQ 309 D+CAAPGGKTTHI E+ A ++ A D RL ++ +N +RL +++ + GD R+ +Q Sbjct: 297 DVCAAPGGKTTHIAELMADSGKIWACDRTASRLRKLQENSQRLNLQSIQIYTGDSRHSNQ 356 Query: 310 WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGT 369 + + DR+LLDAPCS G + RH D +W + + EL+ LQ E+L +K GG Sbjct: 357 F--QNTADRVLLDAPCSGLGTMHRHADARWRQTPESVRELSVLQKELLTHTSTFVKAGGV 414 Query: 370 LVYATCSVLPEENSLQIKAFLQRTAD--------AELCETGTPEQPGKQNL-PGAEEGDG 420 LVYATC++ P EN I AFL + EL + G + P ++ DG Sbjct: 415 LVYATCTLHPAENEEVISAFLAESPHWQIEPPRGIELAASAYSTPQGWFKVWPHRQDMDG 474 Query: 421 FFYAKLIK 428 F +L K Sbjct: 475 FLMVRLRK 482 >UniRef50_B8FS79 Sun protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FS79_DESHD Length = 453 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 141/446 (31%), Positives = 226/446 (50%), Gaps = 31/446 (6%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLDWLINKLM 66 R++A Q + ++ E+ + ++ +SD +++ L L G L+ LD+ + + + Sbjct: 7 RALAVQILRRIEEEKAYANLVMQKALHDLSDPRERQLATLLVNGTLKHRLTLDYALRRHL 66 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLK--GLINGVLR 123 +P++ V +++ + Q+LY +RIP A+ E VE K+ Q K L+N VLR Sbjct: 67 RKPLSQLPHEVRWILRISALQILYLSRIPAAVAINEGVE---LTKKQQGKYTSLVNSVLR 123 Query: 124 QFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWL 176 + ++L + RY HP W++KR K Y +++ +ANN+ P+W+ Sbjct: 124 RVLETGWDMLWPSKEKEPVRFLSLRYSHPEWMVKRWLKRYGMADTEALCQANNEPAPVWI 183 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 R N SR A L+ G+K P+++ +E + LP F++G TVQD S+Q Sbjct: 184 RTNTLKISRADLQARLEGEGVKVTIGERVPESLVIEDFGSLDKLPSFQEGHFTVQDESSQ 243 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGM 295 L PQ G+ +LD C APGGKTTH+ + + + +++A DI ++ + D RLG+ Sbjct: 244 LIAHVLNPQAGQKVLDACGAPGGKTTHLAQRMENQGEILAFDIHPHKVKLIEDLAARLGI 303 Query: 296 KATVKQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 Q GD R + + ++L+DAPCS GV+RR D++W + + +I L LQ Sbjct: 304 TIIRAQAGDARELAG-VKDASCHKVLVDAPCSGLGVLRRRADMRWHKEEDEIKTLPALQL 362 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR-----TAD--AELCETGTPEQP 407 IL+ + GG LVY+TC++ PEEN +KAF T D EL + EQ Sbjct: 363 AILERAAQCVAAGGELVYSTCTIEPEENFEVVKAFRANHPEFITVDFSGELPYSLASEQD 422 Query: 408 GKQN-------LPGAEEGDGFFYAKL 426 KQ LP + DGFF AK Sbjct: 423 RKQAAKGFLQILPHKQGMDGFFLAKF 448 >UniRef50_Q2WB24 tRNA and rRNA cytosine-C5-methylase n=3 Tax=Alphaproteobacteria RepID=Q2WB24_MAGSA Length = 431 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 152/438 (34%), Positives = 219/438 (50%), Gaps = 35/438 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQ-QKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R++A + V+++G+ L ++L + ++ D+D+ ++ L LR L Q+D LI + Sbjct: 10 RAIAVDLLSMVLDKGRLLDDVLDDSRLSRLEDRDRGFVRMLLGTTLRRLGQIDTLIEHCL 69 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +PM + + +G+ QLL+ + PHAA++ TV+ K L+N VLR+ Sbjct: 70 DKPMRAGAAGAEHALRLGICQLLFLDVAPHAAISTTVDLVKGSKLAGFAKLLNAVLRRLD 129 Query: 127 RQQEELLAEFNASDARYLH-PSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R+ +L A A DA L+ P WL + KAY E + A + ++ T + Sbjct: 130 REGRDLAA---AQDAGLLNTPEWLWRSWVKAYGEDGAHAIAAAHLIEA---PVDITVAAD 183 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 + A EA + P ++R V ALPGF+DG +QDA+A L Sbjct: 184 SALWAERLEASV--LPTG----SLRRAAGGSVAALPGFDDGAWWIQDAAAALPARLLGDV 237 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 G+ + DLCAAPGGK + A + A+D +RL R NLKRLG+KA V + D Sbjct: 238 RGKAVADLCAAPGGKALQL--AVAGADLTALDRSAKRLVRFTANLKRLGLKAKVVEADA- 294 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 W FD ILLDAPCSATG +RRHPD+ + ++ +LA +Q+ +L A P LK Sbjct: 295 --GAWTPPAPFDAILLDAPCSATGTLRRHPDVARHKNPAEVMKLAGVQARLLQAAIPMLK 352 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTAD-----------AELCETGTPEQPGKQNLPG 414 GGTLVY TCS+ EE QI A L A L E TPE + LP Sbjct: 353 PGGTLVYCTCSLEAEEGPEQIAALLAGGAPLRRVPIRPEEVGGLAELITPEGD-LRTLPC 411 Query: 415 --AEEG--DGFFYAKLIK 428 A +G D FF A+L K Sbjct: 412 HLASQGGMDAFFAARLEK 429 >UniRef50_UPI0001C335A0 ribosomal RNA small subunit methyltransferase RsmB n=3 Tax=Cyanobacteria RepID=UPI0001C335A0 Length = 453 Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 134/423 (31%), Positives = 218/423 (51%), Gaps = 36/423 (8%) Query: 33 QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-T 91 ++S +D+ L EL +G++R LD LI++L + + + ++ +GLYQLLY Sbjct: 34 HNELSRQDRGLCTELVYGIIRCQRTLDSLIDQLGNKKSQKQSPVLRRILHIGLYQLLYLD 93 Query: 92 RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEE------LLAEF-NASDARYL 144 +P AA+ +V+ A L ++N +LR++ R +++ L +F N + +Y Sbjct: 94 HVPLSAAVNTSVDLAKNNNLNVLSKVVNAILREYIRVKKKENCKLILSKDFVNTTAIKYS 153 Query: 145 HPSWLLKRLQKAYPEQWQSIVEAN-----NQRPPMWLRIN---RTHHSRDSWLALLDEAG 196 P+W++K + +QW NQ P + +R+N +T + L ++ Sbjct: 154 FPNWIVKN----WYQQWGGDTSVKLCYWFNQSPTIDIRVNVLGKTTQEIKNEL-IMANVN 208 Query: 197 MKGFPHADYPDAVRLE-TPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCA 255 ++ PH P ++RL+ + LPGF G TVQD SAQ L P+ GE ++D CA Sbjct: 209 VEYLPH--LPCSLRLKGQTGDIKNLPGFIKGDWTVQDISAQLVSYLLDPKIGETVIDACA 266 Query: 256 APGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGE 313 APGGKTTHI E+ + ++A D RL+++ N++RL +++ + +GD RY Q+ Sbjct: 267 APGGKTTHIAELMRDKGLILACDRISSRLTKIQQNIERLKLRSIKLVKGDSRYLQQF--N 324 Query: 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 373 DR+L+DAPCS G + R+PDI+W + I +L+ +Q EILD +K G LVY+ Sbjct: 325 NFADRVLVDAPCSGLGTLHRNPDIRWRQTPEKIKQLSIIQQEILDKASKWVKPNGVLVYS 384 Query: 374 TCSVLPEENSLQIKAFLQRTAD--------AELCETGTPEQPGKQNLPGAEEGDGFFYAK 425 TC++ EN + FL+ + ++L Q LP DGFF K Sbjct: 385 TCTLNVSENETIVCNFLKNNPEWNIEKPLFSKLFSPFITSSGWLQTLPHEHNMDGFFMVK 444 Query: 426 LIK 428 L K Sbjct: 445 LRK 447 >UniRef50_B8CWT0 Sun protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWT0_HALOH Length = 440 Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 117/387 (30%), Positives = 200/387 (51%), Gaps = 17/387 (4%) Query: 19 VEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV 77 +++G + +L KVSDK D+A + EL +GVLR +LD++++ RP+ V Sbjct: 15 IDKGAYSNLVLNKELNKVSDKRDRAFITELVYGVLRQKKRLDYMLSCFSKRPLRKMDNEV 74 Query: 78 HYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELL--- 133 + V LYQ+ YT +P AA+ ETVE + NGVLR + R +++++ Sbjct: 75 LSALRVALYQIEYTDSVPARAAVYETVEALKSFTGHGAVKFTNGVLRSYLRNKDKIIFPD 134 Query: 134 ---AEFNASDARYLHPSWLLKR-LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWL 189 N Y +P W++K + K + + + + N PP+ +R NR + +L Sbjct: 135 RNQNPVNFLANYYSYPEWIIKEWINKYGFKDTERLCQYLNDSPPVTVRYNRLQVDQKRFL 194 Query: 190 ALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEH 249 + + ++ PD + + LP F+DG VQ +A L P G Sbjct: 195 EVFKKYNIE-VESTTVPDCYVVNNFNTIKDLPLFKDGGFIVQGPAATLAGFVLGPDPGNR 253 Query: 250 ILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRY 306 +LD+ A PGGKTTH+ E+ +++A+DI E +L + +N RLG+ T+K DGR Sbjct: 254 VLDMSAGPGGKTTHLAELMNNRGEIIALDIYEHKLKLIEENCNRLGVNIVKTIKV-DGR- 311 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 + +++FD +L+DAPC+ G++ P+IKW R + D+ +L ++Q +L ++ Sbjct: 312 --DYTSQEKFDMVLVDAPCTGLGLVAHKPEIKWNRTENDVKKLQEIQKSLLHNALSLVRD 369 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRT 393 GG ++Y+TC++ EN + LQ+T Sbjct: 370 GGFVLYSTCTLTRAENEEVVNQVLQQT 396 >UniRef50_D0BMY2 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Granulicatella RepID=D0BMY2_9LACT Length = 441 Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 141/432 (32%), Positives = 221/432 (51%), Gaps = 27/432 (6%) Query: 19 VEQGQSLSNI-LPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQR 75 VEQ QS S I L + QQK + KDK LL EL +G ++ +D+ + + + Q Sbjct: 15 VEQDQSYSTISLKKVIEQQKWTAKDKGLLTELFYGTIQRKMTIDFYLAPYIQKA-KKIQP 73 Query: 76 TVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQ--LKGLINGVLRQFQRQQEEL 132 V L+ + +YQ+++ +IP HAA+ E V+ IA KR + +NGVLR FQR Sbjct: 74 WVKQLLRISIYQMVFLDKIPDHAAIFEAVQ--IAKKRGHQGIAKFVNGVLRNFQRNDLRS 131 Query: 133 LAEFNASDAR----YLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 E +D R Y P W+ + ++ Y EQ Q I E+ P + +RI H +++ Sbjct: 132 FEEIKDTDERMSVQYSIPKWMYQLFKQQYGVEQAQQISESILTAPSVSVRIQPNHLNQEQ 191 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD--ASAQGCMTWLAPQ 245 LL E G++ + + + V FE G +T+QD +S + L P Sbjct: 192 VKQLLLEEGVQT-RESTLSNRCLIVEEGNVFLSKTFEKGIITIQDEASSLVAQVANLKPT 250 Query: 246 NGEHILDLCAAPGGKTTHI---LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 N +LD CAAPGGKTTHI L+ + +V A+D+ E +L ++ +N KRL + + Sbjct: 251 N--KVLDTCAAPGGKTTHIASYLDPSKGGRVDALDLYEHKLKKIQENAKRLQVDDCISMR 308 Query: 303 --DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 D R + + FD + +DAPCS G++RR PDIK+ + +D+ L ++Q +IL + Sbjct: 309 ILDARNAQEAYPTESFDAVFVDAPCSGLGLVRRKPDIKYTKSLKDLKSLEKIQLDILLSA 368 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQN---LPGAEE 417 +K+ G+LVY+TC++ EN + FL+ E+ G ++ LP Sbjct: 369 SKMVKSKGSLVYSTCTINKAENRELVNQFLEENPAFEIEPIGKWIHKDTEDITILPNDFN 428 Query: 418 GDGFFYAKLIKK 429 DGF+ KL+KK Sbjct: 429 SDGFYICKLVKK 440 >UniRef50_A6BZY6 Sun protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZY6_9PLAN Length = 477 Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 139/451 (30%), Positives = 222/451 (49%), Gaps = 43/451 (9%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKV--SDKDKALLQELCFGVLRTLSQLDWLI 62 R+ R +A +E+ Q +S+ + ++++ S D L E+ GV+R LD +I Sbjct: 31 RSARQLAFFLLEEYRRTDQFISDSMQQWERRIDLSSADWRLAMEISIGVVRRQLTLDTII 90 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQL-LYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + RP + + L+ +G YQL + +IP HAA++ETVE A ++R + K ++N + Sbjct: 91 ESQLTRPREKVEAPLWTLLQIGAYQLVMLDQIPDHAAVSETVELAGKLQRVRWKKMVNAI 150 Query: 122 LRQFQRQQEELLAEFNASDA------RY------LHPS-------WLLKRLQKAYP---- 158 LR R + +A S+ RY L P+ +L K P Sbjct: 151 LRSISRLTADDIATEPQSNTIPLSADRYRSFSIGLFPNPIADPAGYLSKAFSFPLPVIRD 210 Query: 159 -------EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 +Q + + NQR ++LRIN R+ L L G++ P D P A+RL Sbjct: 211 WLTRFSVQQTMQMAQWFNQRNNLYLRINALQTGREQLLEELQAEGIQVSP-GDEPQAIRL 269 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PE 270 E P + L GF G T+QD SA L PQ E + D+CAAPG KTTH+ E+ Sbjct: 270 EEPVAMENLVGFSAGKFTIQDQSAMAAGNLLNPQPEETVWDMCAAPGTKTTHLAELMYNR 329 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 ++A D+ RL ++ N RLG+ ++ P + +QFD IL+DAPCS +GV Sbjct: 330 GTLIATDVSCDRLEKIEQNASRLGL-TCIETHLVNQPDEIWSTKQFDAILVDAPCSNSGV 388 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 + + P+ +W + + EL Q+Q ++L+ + HLK+ G LVY+TCS P EN ++ L Sbjct: 389 LGKRPEARWRLDEVSLKELNQIQRDLLEQAFQHLKSSGRLVYSTCSFDPRENEDLLQDVL 448 Query: 391 QRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 + + +L ++LPG+ G+ Sbjct: 449 RDHPERKLVREN-------RHLPGSPCDGGY 472 >UniRef50_A3UKE9 RRNA methyltransferase RsmB n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UKE9_9RHOB Length = 450 Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 153/446 (34%), Positives = 214/446 (47%), Gaps = 48/446 (10%) Query: 8 RSMAAQAVEQVVEQGQSLSNILP--PLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R++A AVE V+ + L L P +++ +D+A + + V+R LD + ++ Sbjct: 27 RAVALGAVEGVLAKAVPLDGALAGRPEWKRMEPRDRAFARAIASAVIRRPIALDAALMQV 86 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR--PQLKGLINGVLR 123 + +P+ ++ H ++ G + L P HAA+ V +A R + K L N VLR Sbjct: 87 LDKPLPDEEVRAHLILRCGAAERLILDTPAHAAVDAWVS-LMAQDRHTARFKNLANAVLR 145 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 + Q ++ F SD P WL +R + Y E + PP Sbjct: 146 RVVDQGKD---AFLDSDPLEDLPDWLAERWVETYGEPTARAIAIARSVPPT--------- 193 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETP-------APVHALPGFEDGWVTVQDASAQ 236 L L + G A+ A LET V LPGFE+G VQDA+A Sbjct: 194 -----LDLTAKPGFDAQSFAEEIGASVLETGTIRRPDIGAVDGLPGFENGDWWVQDAAAA 248 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L + GE + DLCAAPGGKT + A A V+AVD +RL R+ DNL+R +K Sbjct: 249 LPAKLLGVKAGETVADLCAAPGGKTLQL--AATGASVIAVDASPKRLKRLEDNLERTKLK 306 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 A + D + W + D ILLDAPCSATG +RR PD W ++ DI LA +Q + Sbjct: 307 AEIVAAD---VADWTAPEPLDAILLDAPCSATGTLRRRPDAAWAKQPGDIANLADIQRRL 363 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL---P 413 LDA + LK GG LVY TCS+ EE QI+AFL+RT DA L E PG + Sbjct: 364 LDASFNQLKPGGRLVYCTCSLEREEGEDQIEAFLKRTPDARLDPVTADELPGLKAAITPD 423 Query: 414 GA---------EEG--DGFFYAKLIK 428 GA E G DGF+ A+++K Sbjct: 424 GAVRTRPDLWSERGGLDGFYIARIVK 449 >UniRef50_A5VKQ4 Sun protein n=14 Tax=Lactobacillus RepID=A5VKQ4_LACRD Length = 449 Score = 190 bits (482), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 137/446 (30%), Positives = 227/446 (50%), Gaps = 28/446 (6%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNI-LPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWL 61 +N R +A A+E VVE G + SN+ + L +K ++DKD+ L + +GVL+ L++ Sbjct: 8 QNARELALVALEGVVENG-AYSNLQVDQLLKKYPLADKDRRLATNIIYGVLQHKLTLEYW 66 Query: 62 INKLMARPMTGKQRT--VHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 +N + GK+ V L++ LYQ Y R+P A E++E A P ++ + Sbjct: 67 LNGFIQ----GKRLDPWVKTLLLSALYQYHYLERVPDWAVTDESIEIAKRRGNPGIRKFV 122 Query: 119 NGVLRQFQRQQEELLAEFNASDARYL----HPSWLLKRLQKAYPEQ-WQSIVEANNQRPP 173 GVL R+ L + N D R P WL+ L Y E+ + I+++ N+ Sbjct: 123 TGVLHAILRKGLPDLRQINERDLRLSIENSVPRWLVNELTGEYGEEDTEKILQSINEPAH 182 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 +R+N + LD AG++ + + T + + F++G +T+QD Sbjct: 183 QVIRVNTAKTDLPTVKQTLDAAGIE-YQEGQVAQNALVITKGEIISSDLFKNGEITIQDE 241 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE--AQVVAVDIDEQRLSRVYDNLK 291 SA + + + G+ +LD CAAPGGKT I E + V A+DI + ++ + N + Sbjct: 242 SAMLAVESMHIEPGDKVLDACAAPGGKTVQIAETLADEDGHVDALDIHQHKVRLIEKNAR 301 Query: 292 RLGM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 RLG+ + T D R Q ++ FD+IL+DAPCS G++RR P+I++ + D +L Sbjct: 302 RLGVEKRVTAHALDAREVDQLFDDESFDKILVDAPCSGIGLLRRKPEIRYTKTLNDSKQL 361 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ--- 406 ++Q IL+A+ +K GG + Y+TC++L +EN ++AFL + EL +T T + Sbjct: 362 HKIQLAILNAVAAKVKKGGIITYSTCTILRQENDDTVQAFLAEHPEFELVKTTTARKVKD 421 Query: 407 ----PGKQNLPGAEEGDGFFYAKLIK 428 P LP + DGFF + L K Sbjct: 422 NRHSPTLTILPSDFDSDGFFISSLKK 447 >UniRef50_C5WIG1 16S rRNA m(5)C 967 methyltransferase n=44 Tax=Streptococcaceae RepID=C5WIG1_STRDG Length = 452 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 134/452 (29%), Positives = 224/452 (49%), Gaps = 54/452 (11%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK-----DKALLQELCFGVLRTLSQLDW 60 ++R A +E + +QG + +NI L Q++S+K D+ALL E+ +G + L+W Sbjct: 20 SIRGKALLTLEHIFDQG-AYTNI--ALNQQLSNKALSTKDRALLTEIVYGTVSRKISLEW 76 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKG--- 116 + + + + V+YL+M+ LYQL+Y ++P HA + + V IA R KG Sbjct: 77 YLAHYV-KDRDKLDKWVYYLLMLSLYQLIYLDKLPAHAIVNDAV--GIAKNRGNKKGAEK 133 Query: 117 LINGVLRQFQRQQEELLAEFNASD----ARYLHPSWLLKRLQKAY-PEQWQSIVEANNQR 171 +N +LRQF + + +Y P WL+K+L+ + ++ +I+E+ R Sbjct: 134 FVNAILRQFTSHPLPDMGTIKRRNKYYSVKYSLPVWLVKKLEDQFGSDRSVAIMESLFVR 193 Query: 172 PPMWLRIN------RTHHSRDSWLALLDEAGMKG----FPHADYPDAVRLETPAPVHALP 221 +R+ + D+ +LL G+ F +DY Sbjct: 194 SKASIRVTDPLKLEKIAEDLDAERSLLSATGLTKASGHFAASDY---------------- 237 Query: 222 GFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQ 281 F +G +T+QD S+Q L E ILD C+APGGKT+HI +V+A+D+ + Sbjct: 238 -FTNGDITIQDESSQLVAPTLNIDGDEIILDACSAPGGKTSHIASYLKTGKVIALDLYDH 296 Query: 282 RLSRVYDNLKRLGMKATV--KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKW 339 +L V +N RLG+ + ++ D R + + FD+IL+DAPCS G+IRR PDIK+ Sbjct: 297 KLELVKENANRLGVADNIETRKLDAREVHRHFEKDSFDKILVDAPCSGIGLIRRKPDIKY 356 Query: 340 LRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC 399 + +D L +Q EIL ++ L+ GG + Y+TC++ EEN I+AFLQ + E Sbjct: 357 NKESQDFNALQAIQLEILSSVCQTLRKGGIITYSTCTIFDEENRQVIEAFLQSHPNFEQV 416 Query: 400 ETGTPEQPGKQN-----LPGAEEGDGFFYAKL 426 + + ++ P + DGFF ++ Sbjct: 417 KLNHTQADIVKDGYLIITPEQYQTDGFFIGQV 448 >UniRef50_C8WW78 Sun protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW78_ALIAD Length = 451 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 151/447 (33%), Positives = 233/447 (52%), Gaps = 32/447 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R A QA+ +V G L+ L V ++D+AL E+ +G LR LD L++ L Sbjct: 6 RRRAYQALIRVERDGAFLNAALQEALAGAGVDERDRALATEIAYGTLRRQITLDRLLSPL 65 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + RPM+ V ++ +G YQ+ + R+P +AA + VE A RPQ L+N VLR+ Sbjct: 66 VRRPMSKLDPEVRVILRMGAYQMTWLNRVPAYAAANDAVELA-KRHRPQAAALVNAVLRR 124 Query: 125 F-QRQQ--EELL--AEFNASDAR-----YLHPSWLLKRLQKAY-PEQWQSIVEANNQRPP 173 + +R Q E+LL A A D Y P+W+++RL + ++ + + + N+ P Sbjct: 125 YAERAQDWEDLLNKAVAGAKDVERWSVMYSVPAWIVERLVADHGADRVLAALASMNEPAP 184 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 M LR NR SR+ +A L G P A D +R++ V L + DG+VT+QD Sbjct: 185 MSLRANRLRGSREEAIARLGAEGAVARPAALAEDGLRVQGQVDVTRLQAYRDGYVTIQDE 244 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKR 292 A L P+ G ++DLCAAPGGKTTH+ E+ + ++ A D+ ++ + +R Sbjct: 245 GAMLVAPLLRPEPGMRVVDLCAAPGGKTTHLAELMGDRGEIDAYDVTVAKVRAIRQQAER 304 Query: 293 LGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+++ + GDGR Q E +D L+DAPC+ GV+RR PD+++ RR D+ +LAQ Sbjct: 305 LGLQSVHPRLGDGR---QVTPEGLYDAALVDAPCTGLGVMRRRPDLRYRRRPEDVAQLAQ 361 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ------RTADA------ELC 399 LQ +L +++GG +VY+TC++L EEN ++ R D L Sbjct: 362 LQRALLRRACAIVRSGGCVVYSTCTLLKEENESVVRDVASDPSVGVRIEDIGGDLAPTLA 421 Query: 400 ETGTPEQPGKQNLPGAEEGDGFFYAKL 426 + PG P E DGFF A+L Sbjct: 422 VSVGERSPGFLLWPDWHETDGFFMARL 448 >UniRef50_UPI000174635C RsmB n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174635C Length = 414 Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 143/405 (35%), Positives = 211/405 (52%), Gaps = 36/405 (8%) Query: 34 QKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRI 93 ++ +D ALLQ L G LR + LD + ++ + +VH+L+ +G+ QLL + Sbjct: 37 HRLDHRDTALLQTLVMGTLRNIDLLDIWLERVCDN--QHLETSVHWLLRLGIAQLLLLEM 94 Query: 94 PPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFN--ASDARYLHPSWLLK 151 P HA + ETV A + +GL+N VLR+ R++ LLA + R HPSWL + Sbjct: 95 PAHAVVNETVNQA-----GKARGLVNAVLRRVDRERIPLLARMDRLPIAERTSHPSWLAE 149 Query: 152 RLQKAYPEQW-QSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVR 210 R K + + +++ E + Q ++R+N+ H L E + P +P R Sbjct: 150 RWTKQFGKSAAEALCEWDQQPASTYVRVNQLHPQ-----PLTPEEVLPLEP-ISFPGFFR 203 Query: 211 LETPAPVHALPG--FEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-V 267 +T LP G QD S LAPQ GE ILD CAAPGGK+ ++ + + Sbjct: 204 ADT------LPREWLASGRCYAQDPSTVIACDLLAPQPGETILDACAAPGGKSAYLAQKM 257 Query: 268 APEAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGR--YPSQWCGEQQFDRILLDAP 324 + +++ D +RL R+ NL+RL + A +Q D P W G Q DRILLDAP Sbjct: 258 QNQGRILTCDSVPRRLQRMQQNLERLNVTIAENRQVDWTKPLPPIWKG-VQVDRILLDAP 316 Query: 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSL 384 CS TGV+RR D++W E+AQLQ++IL + P LK+GG+LVY+TCS+ EEN Sbjct: 317 CSNTGVMRRRVDVRWRLDPEVFVEMAQLQTKILSTLSPLLKSGGSLVYSTCSLDREENED 376 Query: 385 QIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 I +FL + +L ET + +LP + DG F A L+K Sbjct: 377 IIASFLVAHPEFKLVET-------RSSLPWRDGFDGAFAALLLKS 414 >UniRef50_Q1NQ57 Fmu, rRNA SAM-dependent methyltransferase n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ57_9DELT Length = 487 Score = 187 bits (474), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 157/490 (32%), Positives = 229/490 (46%), Gaps = 66/490 (13%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSD-KDKALLQELCFGVLRTLSQ 57 M N+R +A Q + + GQ + +L + ++D +D+ LL+ L +GVLR Sbjct: 1 MTPTANIRQVALQLLLAQEQSGQPVEQLLEHQLREHPLADGRDRRLLEALVYGVLRWRGL 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQ-LK 115 LD ++ P+ + + +G+ QLL R+P AA+ ET++ A ++P+ L Sbjct: 61 LDQVVAGYARHPLAKMKPLTLAALRLGILQLLILERLPASAAINETIKALRAARQPRWLT 120 Query: 116 GLINGVLRQ-------FQRQQ--EELLAEFNASDARYL--------------HPSWLLKR 152 G +N VLR+ RQQ L+AE A +Y HP WL +R Sbjct: 121 GFVNAVLRKAAADIERLGRQQYLAGLVAEGTAPTGQYASPDPLPMAVAAWLSHPPWLRQR 180 Query: 153 LQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 ++ Y E + + NN PP+ LR+N + LA L +AG+ DY A + Sbjct: 181 WEQRYGLELCRELCHINNCLPPLVLRVNLHRLTASELLAQLQKAGIAAT-AGDYAPAAVV 239 Query: 212 ETPAP--VHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV-A 268 P V LPG+ GW VQD +AQ LA H LD CA GGKT H+ E+ Sbjct: 240 LPPGSGRVEDLPGYALGWFAVQDEAAQLVTMLLAGAGPGHYLDACAGLGGKTAHLAELLP 299 Query: 269 PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD---------------------GRYP 307 PEA + A++ +R + NL RLG+ A + QG+ P Sbjct: 300 PEATITALEPQSRRALLLTANLHRLGVTARLIQGELAAHLPAAELEAAGASHDKKGDTIP 359 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 S + G + IL+DAPCS GVIRRHPDI+W RR ++ + Q E+L L+ G Sbjct: 360 SPFLGF--YRGILVDAPCSGLGVIRRHPDIRWNRRAAELKNYQRRQLELLSTAAELLQPG 417 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP--GKQNLPG-------AEEG 418 G LVY CS PEEN I+ L+R + L P P +Q + G ++ Sbjct: 418 GVLVYVVCSFEPEENEEVIQLLLKRRPELRLSAP-APYLPVAARQLVRGDFFRSLPSDGL 476 Query: 419 DGFFYAKLIK 428 DGFF A+L+ Sbjct: 477 DGFFAARLVS 486 >UniRef50_C9LLK5 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK5_9FIRM Length = 454 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 134/448 (29%), Positives = 221/448 (49%), Gaps = 26/448 (5%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQ----SLSNIL--PPLQQKVSDKDKALLQELCFGVLRTL 55 +K ++ R++A +A+ ++ E+ ++ +IL PL+++ ++ LL EL +GV R Sbjct: 7 EKIKSARTLAFEALYEIFEKNAYANLTIQSILRWCPLKKE----ERHLLTELIYGVCRKY 62 Query: 56 SQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQL 114 + W+I+ + RPM V L+ +G+YQ+++ RIP AA+ ETV+ A + Sbjct: 63 NYCLWMISLISDRPMFKIHPAVRILLALGIYQIVFLDRIPESAAVNETVKIAKKVTHIGN 122 Query: 115 KGLINGVLRQFQRQQEELLAEFNASDAR------YLHPSWLLKRLQKAYPE-QWQSIVEA 167 INGVLR F R++ L S+ Y P WL++ +K Y Q + I++A Sbjct: 123 VKFINGVLRNFLRRRGSLTLPDRTSNRVFYESLIYNQPEWLIRFFEKEYGMGQSEKILKA 182 Query: 168 NNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGW 227 N +R+N D L + + P+A+ ++ + + G Sbjct: 183 FNTISDTCIRVNTLKIETDDIKKQLKLRNISVGDISYMPEALAIKAGTDILFSEFLQTGL 242 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRV 286 + +Q AS+ L P G+H+LD+CAAPG KTTHI + + A D+ ++ + Sbjct: 243 IYIQTASSMIPAKVLGPDAGDHVLDMCAAPGSKTTHIAALMGNRGSIDAWDVYPHKVKLI 302 Query: 287 YDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 DN KRLG+ + D P + E +D++LLDAPCS GV+ +++W R++ D Sbjct: 303 KDNAKRLGISIIHTEVRDSVKPLPFLYET-YDKVLLDAPCSGLGVLGHKVELRWRRKESD 361 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE 405 + LQ ++++ + KTGG LVY+TC++ P+EN I FL ++ E P Sbjct: 362 LSVFPPLQKQLIEQAAKYTKTGGVLVYSTCTLNPDENEHIINEFLSLHSEFAPEEFNFPV 421 Query: 406 QPGKQN-----LPGAEEGDGFFYAKLIK 428 N P DGFF AKL K Sbjct: 422 LGKSLNGMMTLYPDLVRSDGFFVAKLRK 449 >UniRef50_C5EIZ3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EIZ3_9FIRM Length = 447 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 131/441 (29%), Positives = 218/441 (49%), Gaps = 35/441 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R + + +V+++G + +L QK + D+A + + G L L Q+D +INK Sbjct: 13 RGIVLDILSEVLDKGSFVHLVLNQALQKYQYLDKSDRAFITRVTEGTLEYLLQIDHIINK 72 Query: 65 LMARPMTGKQR-TVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 +R T K + + L+ + +YQ+LY R+P A E V+ A+ + LKG +NGVL Sbjct: 73 Y-SRTKTDKMKPLIRNLLRMSVYQILYMDRVPDSAVCNEAVKLAVKRRFTGLKGFVNGVL 131 Query: 123 RQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANN-QRPPMWLRINRT 181 R R++ L+ F++ Y P W+ +K Y ++ A+ + P W+R N + Sbjct: 132 RTISREKASLV--FDSPSLAYSIPQWMYDMWEKEYGSAKAEMIAASFLEDRPTWVRCNLS 189 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 R++ L LD G+ P + + + L F++GW+ VQDA++ Sbjct: 190 RALREAILKSLDSQGVMVKELDCLPSVLAISGYDYMEGLECFQNGWIQVQDATSAFVGEL 249 Query: 242 LAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLG---MKA 297 P+ G++I+D+CAAPGGK+ H+ + + V A D+ Q+ + + +N+ R G +KA Sbjct: 250 ADPKEGDYIIDVCAAPGGKSLHLADKMKGTGMVEARDLSYQKTALIEENVARSGAANIKA 309 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 V D P + E+ D ++ D PCS G+I + PDIK+ + EL++LQ +IL Sbjct: 310 VV--WDALVPDEDAREKA-DIVIADLPCSGLGIIGKKPDIKYNMTMDKMRELSRLQRDIL 366 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENS--------------LQIKAFLQRTADAELCETGT 403 +W ++K GGTLVY+TC++ P EN + + L D + G Sbjct: 367 SVVWQYVKPGGTLVYSTCTIDPMENEGNAMWLSENFPLEPVDLSGRLGEDFDEPSLKDGR 426 Query: 404 PEQPGKQNLPGAEEGDGFFYA 424 Q LPG DGFF + Sbjct: 427 I-----QFLPGIHPFDGFFIS 442 >UniRef50_C8R080 Sun protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R080_9DELT Length = 501 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 155/473 (32%), Positives = 226/473 (47%), Gaps = 56/473 (11%) Query: 8 RSMAAQAVEQVVEQGQSLSNILP--PLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINK 64 R +A + + Q +Q + L +L P ++ SD+ D+ L++ L + VLR LD ++ + Sbjct: 19 RQVALEILLQQEQQNRPLDQVLAEYPARRWPSDRRDRQLVRALVYEVLRRRGFLDHVVAR 78 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQ-LKGLINGVL 122 P+ + + +GL QLLY R+PP AA+ ET+ A ++P+ + G +NG+L Sbjct: 79 YAKHPLAKMKPLTLAALRLGLAQLLYFDRLPPAAAIDETIRALKAARQPRWITGFVNGLL 138 Query: 123 RQFQRQQEELLAEFNASDARYLH-PSWLL-KRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 R R++ ELL A +L P+WL +R Q+ E+ A NQ PP+ LR+N Sbjct: 139 RNAARERAELL-RLAAEQCDWLSVPAWLRQRREQQLGQERAYHRSRAENQPPPLVLRVNT 197 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCM 239 + + L G++ P A+RL + V LPGF +GW VQD +AQ Sbjct: 198 AKINCATLAEQLQHNGIEVEESTFAPAALRLPSYHGRVEELPGFNEGWFAVQDEAAQLVT 257 Query: 240 TWLA----PQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLG 294 L P+ G LD CA GGKT H+ E+ P E+++VA++ R + + +NL RLG Sbjct: 258 MLLQKEPDPEPGALFLDACAGLGGKTAHLAELLPAESRLVALEPHTGRFALLAENLARLG 317 Query: 295 MKATVKQGDG-------RYPSQWCGE------------------------QQFDRILLDA 323 K DG R + G+ F ILLDA Sbjct: 318 HKFFKLPPDGPPEELARRLQTAAAGKPAPLLLCPQTLASFARLLDSASVAPAFQGILLDA 377 Query: 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 PCS GV+RRHPDI+W R+ D+P + Q +LD L GG LVYA CS PEEN Sbjct: 378 PCSGLGVVRRHPDIRWNRQPEDLPRYCKQQIALLDQAAKLLAPGGVLVYAVCSNEPEENR 437 Query: 384 LQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEG----------DGFFYAKL 426 I+A R + E+ + P P +EG DGFF A+L Sbjct: 438 EVIQALTSRHPELEVTDP-RPWLPPPAATLVDDEGYLRSTPETGLDGFFAARL 489 >UniRef50_C0QI57 RsmB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI57_DESAH Length = 455 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 135/410 (32%), Positives = 200/410 (48%), Gaps = 14/410 (3%) Query: 34 QKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-R 92 + ++ +D+AL + +G LR LDWLI RP+ + + Y + LYQ ++ + Sbjct: 46 ESLAHRDRALANAIIYGTLRWKEHLDWLITPFSKRPLDQIEPAICYTLRTALYQTVFMDK 105 Query: 93 IPPHAALAETVEGAIAIKRPQLKGLINGVLRQ-FQRQQEELLAEFNASDARYLH-----P 146 IP AA+ V A + G +N VLR+ R + + + A ++ P Sbjct: 106 IPVSAAVNTAVNAAKKLSNTGAAGFVNAVLRKATTRYMDVAMPDSKKDPALFISKSQSIP 165 Query: 147 SWLLKR-LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADY 205 WL +R +++ + ++++A N PP+ LR N R S L+ P Sbjct: 166 LWLSRRWIRRFGLDASIALLDAINTIPPITLRANTLRTDRASLATALEPHVETIVPTFHT 225 Query: 206 PDAVRLETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI 264 PD + + P P+H F++G VQD + Q T LAPQ GE ILD CA GGKT H+ Sbjct: 226 PDGLSVTRPRTPLHLTTAFKEGLFQVQDEATQIVTTLLAPQPGERILDACAGLGGKTGHM 285 Query: 265 LEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQFDRILLD 322 ++ + ++ A D+D ++L+ + + +KRLG+ T KQ D FDR+L+D Sbjct: 286 GQIMNNQGKIEAWDLDARKLAVLGNEMKRLGITNVTTKQMDALDIDPAECNTPFDRVLVD 345 Query: 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 APC+ GV+RR+PD +W R DI LA LQ IL+ + +K GG LVYA CS PEEN Sbjct: 346 APCTGLGVLRRNPDARWRRTLGDIKRLADLQKRILNNLADLVKPGGILVYAVCSCEPEEN 405 Query: 383 SLQIKAFLQRTADAELC--ETGTPEQPGK-QNLPGAEEGDGFFYAKLIKK 429 I FL L Q G + P DGFF A + K Sbjct: 406 EGVIDWFLNNQKSFALVPQSHDLASQDGIFKTYPHPLGMDGFFAATMKKN 455 >UniRef50_B9K874 Sun protein n=6 Tax=Thermotogaceae RepID=B9K874_THENN Length = 431 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/372 (32%), Positives = 200/372 (53%), Gaps = 20/372 (5%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IP 94 ++D+D+ L+EL +GV+R LDW IN+L+ P V + +G+YQLL+ +P Sbjct: 34 LNDRDRRFLKELVWGVMRKEELLDWYINQLLRNPDIPP--AVRVALRMGVYQLLFMDGVP 91 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDAR--YLHPSWLLKR 152 +AA++ETV+ +K K L+N VLR+ + SD Y HP WL+ Sbjct: 92 DYAAVSETVK---LVKNENFKKLVNAVLRRVKSVPP-------PSDLHLVYSHPKWLVDY 141 Query: 153 LQKAYPEQWQSIVEANNQRP-PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 + PE+ + Q+P P LR+N +R+ + +L + G + P +V + Sbjct: 142 WRSFLPEEVVLRIMEWYQKPLPTVLRVNSLVTTREEVIEILSKEGTEAIYGKHSPFSVVI 201 Query: 212 ET-PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE 270 + P++ +G TVQ S+Q + + +LD C+APGGKTT I E+ + Sbjct: 202 KKLGVPLNDSKVITEGLATVQGESSQIVPLLMDLEPNMKVLDTCSAPGGKTTFIAELMKD 261 Query: 271 -AQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSAT 328 +++A D+ +RL V +++RL + + +K D +++ + +FDRIL+DAPCS+ Sbjct: 262 KGEILATDVSMERLQLVEKHVRRLKLSSVKIKLADAERLTEFI-QDEFDRILVDAPCSSL 320 Query: 329 GVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKA 388 G R HP++ + + EL++ Q IL W LK GG L+Y+TC++ EEN+ IKA Sbjct: 321 GTARNHPEVLRRAKKEEFKELSEKQFRILSQSWKLLKKGGILLYSTCTITKEENTEVIKA 380 Query: 389 FLQRTADAELCE 400 F ++T D E+ + Sbjct: 381 FAEQTPDVEVID 392 >UniRef50_Q1Q7P9 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7P9_9BACT Length = 462 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 137/446 (30%), Positives = 212/446 (47%), Gaps = 67/446 (15%) Query: 33 QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR 92 Q VS +DK LL EL G+ R LD +++ P + + Y + +G+YQ+++ Sbjct: 31 QTNVSRRDKHLLLELVNGITRHRLSLDTILSFFSKIPPQKIEPWLLYALRLGIYQMIFLD 90 Query: 93 IPPHAALAETVEGAIA--IKRPQLKGLINGVLRQFQR--------------------QQE 130 PH+A T + I+RP N +LR R ++E Sbjct: 91 KIPHSAAVNTSVELVKNLIRRPDAARFANAILRAVDRTIKNKYSVNHKNVNQQKLLYKKE 150 Query: 131 ELLAEFNAS-------------DARYLHPSWLLKR-LQKAYPEQWQSIVEANNQRPPMWL 176 + EF+ Y HP WL+KR L + ++ I +ANN P + L Sbjct: 151 NVWCEFSEPIFPDPGENLTSYIAKNYSHPEWLIKRWLTRYGIDKTIEICKANNHIPTLSL 210 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 RIN S + + +LL++ G+ + + + V +PGF +G +VQD ++ Sbjct: 211 RINHNKTSINEFASLLEQNGILA---RVIDNNALIINKSVVSDIPGFSNGLFSVQDITSM 267 Query: 237 GCMTWL---APQNGE-HILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLK 291 T+L P G +LD+CAAPGGKTTHI E+ + + A+DI +RL RV +N + Sbjct: 268 KVGTFLIAETPTAGAITLLDMCAAPGGKTTHIAEIIQNKGSIYALDISLKRLHRVKENCQ 327 Query: 292 RLGMKATV----KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 RLG+K +G+ P + +FDR+L D PCS TGV+ R + +W +++I Sbjct: 328 RLGIKNITIICCDASEGKIPFR----GKFDRVLADVPCSNTGVLSRRVEARWRITEKNIK 383 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL----QRTADAELCETGT 403 +LA LQ +L LK G LVY+TCS+ PEEN ++ FL Q D E C + Sbjct: 384 QLAALQYSLLKTGSTMLKQDGILVYSTCSIEPEENQEVVQKFLKNEPQFYLDKEDCYS-- 441 Query: 404 PEQPGKQNLPGAEEGDGFFYAKLIKK 429 P +GDG + A++ K+ Sbjct: 442 ---------PEINKGDGGYMARIRKR 458 >UniRef50_UPI00016C38F9 Fmu, rRNA SAM-dependent methyltransferase:Nop2p n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C38F9 Length = 465 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 139/476 (29%), Positives = 222/476 (46%), Gaps = 74/476 (15%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 + + R+ AA+ V+ V +S +D+ + +L FGV+R LD Sbjct: 13 LNRSRSRDGFAAELVDDAVNAAN------------LSPQDRRFVTQLVFGVIRRGGTLDA 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLIN 119 L+ + P Q V L+ +G +QL + T +P HAA+ ETVE A + P+ KG +N Sbjct: 61 LLKPFIHLPTHAVQDRVWDLLRLGAFQLTFLTHVPKHAAVHETVELAEHVGAPKAKGFVN 120 Query: 120 GVLRQ-------------------------------------FQRQQEELLAEFNASDAR 142 GVLR+ ++R + +L + A Sbjct: 121 GVLRRIAELTTDEFTDAPGAAAVPFALVESAPTPSEGGGRGSYRRLTKPVLPDPATDPAP 180 Query: 143 YL-----HPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAG 196 Y P WL R K Y ++ + N PP+W+R+N+ SR+S+ L Sbjct: 181 YFAAAFSFPQWLANRWLKRYGVDECVRLGFWFNAAPPLWVRVNKLRASRESYRIQLAAQT 240 Query: 197 MKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAA 256 ++ P ++P A+R + LPG+ +G VQD S+ + L Q G ILD CAA Sbjct: 241 IEVEP-GEHPQALRFSQHHSIRDLPGYAEGDFAVQDHSSMLVASALGVQPGMRILDACAA 299 Query: 257 PGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRL---GMKATVKQGDGRYPSQWCG 312 PGGKTTH++E+ + A DID +RL V +R+ G++ + + + +P+ Sbjct: 300 PGGKTTHLMELMDGRGHITACDIDPKRLETVAALAQRMRLTGIETVLLKDNEEFPAG--- 356 Query: 313 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVY 372 FD L+D PCS TGVI R P+++W + + L +LQ+ +L +K GG +VY Sbjct: 357 --PFDAALVDVPCSNTGVIGRRPEVRWRLKPNEFEYLIRLQTRLLILAADRVKPGGAVVY 414 Query: 373 ATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 +TCS+ P+EN +KA L+ G + ++PG DG ++A+L K Sbjct: 415 STCSIEPDENEGVVKAVLRGM-------RGLTLEAEHHSVPG-RPSDGGYWARLRK 462 >UniRef50_Q0F395 Sun protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F395_9PROT Length = 404 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 126/357 (35%), Positives = 187/357 (52%), Gaps = 27/357 (7%) Query: 35 KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIP 94 ++ + + LL EL +GVLR L+ ++ + T +++G YQL Y R+P Sbjct: 31 RLDARGRGLLHELVYGVLRRFYSLEADYSRFC---RSKPDDTARMALLIGTYQLRYMRVP 87 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ--EELLAEFNASDARYLHPSWLLKR 152 HAAL+ETV A+ P+ G +N VLR+ + ++L A R+++ W Sbjct: 88 AHAALSETV-AAVMQSNPKAGGFVNAVLRRVSEHEPPQKLKPNQRAELPRWIYAGW---- 142 Query: 153 LQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 + A+ EQ + EA P + L + RD WL + G+ P AV L Sbjct: 143 -RDAFGAEQVTACSEALKTVPQLSLAL---FTDRDKWLEQVTGMGIDAVAGELTPCAVLL 198 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP--QNGEHILDLCAAPGGKTTHILEVAP 269 V LPG+E+G TV D +AQ + L P +NG ILD+CAAPGGKT + P Sbjct: 199 PAGTDVTTLPGYEEGAFTVIDQAAQAAVMALEPVCRNGV-ILDICAAPGGKTAMLSHRFP 257 Query: 270 EAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGR---YPSQWCGEQQFDRILLDAPC 325 EA ++A++++ +R+ R+ +NL+RLG V Q DG PS D +LLDAPC Sbjct: 258 EATILAIELNARRIPRLNENLQRLGCSNVQVIQADGLNLPLPSL-----SVDALLLDAPC 312 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 SA+G++RRHPD K+L ++ + LA LQ +L LK +VYA CS+ P+EN Sbjct: 313 SASGILRRHPDAKFLHDEQAVETLAALQRRLLSESLRVLKPDAAMVYAVCSIHPQEN 369 >UniRef50_Q03FY2 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Pediococcus RepID=Q03FY2_PEDPA Length = 444 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 144/450 (32%), Positives = 227/450 (50%), Gaps = 30/450 (6%) Query: 1 MKKQRN-LRSMAAQAVEQVVEQGQSLSNILPPLQQKVS-----DKDKALLQELCFGVLRT 54 M Q N R++A +E++ E S SNI L Q + D DK LL E+ +GVL+ Sbjct: 1 MTNQNNSARNLAVDILEKIDEG--SFSNI--QLNQDIKSSSLIDIDKNLLTEIVYGVLQH 56 Query: 55 LSQLDWLINKLMARP-MTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRP 112 LD+ + + +P MT R V L+ ++Q+ + R+P A E++E A Sbjct: 57 RLTLDFYLADYIRKPEMT--PRWVINLLRTAVFQMEFLDRVPDFAIFNESIEIAKLRGND 114 Query: 113 QLKGLINGVLRQFQRQQ----EELLAEFNASDARYLHPSWLLKR-LQKAYPEQWQSIVEA 167 ++ ++ GVLR +QR + + +Y W++ + L + E+ SI+++ Sbjct: 115 GIRKMVTGVLRSYQRNGKPSFDSIKNPVEKLSTQYSVAPWIVDQMLYELGEEKCISILKS 174 Query: 168 NNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGW 227 NQ + +RINR + + + L E A D +RL A + + DG Sbjct: 175 INQPSHLAVRINRWNKTHADIIKDL-EYEYTVTTSAIAKDGLRLSKGASISDTRSYIDGD 233 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEA-QVVAVDIDEQRLSRV 286 +TVQD SA + + G+ +LD CAAPGGKTT I + E +V DI ++R+ + Sbjct: 234 LTVQDESAMLVAETMHLEKGQKVLDACAAPGGKTTQIAAMIGETGEVTGWDIYQKRVQLI 293 Query: 287 YDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 DN +R+ ++ + + ++ FDRIL+DAPCS G++RR P+I++L+ +D Sbjct: 294 QDNAQRMHLENVKTEVQDAIAPREDLDESFDRILVDAPCSGIGLMRRKPEIRYLKSKKDS 353 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ 406 +L QLQ +ILD I LK GG L Y+TC++L +EN I+ FL + E + T ++ Sbjct: 354 SDLHQLQLKILDNIAKMLKVGGVLTYSTCTILRKENQETIEKFLAIHPEFEQLKVETAKK 413 Query: 407 PGKQN--------LPGAEEGDGFFYAKLIK 428 KQN P E DGFF A L K Sbjct: 414 I-KQNRDELSLNIYPDDFESDGFFIANLKK 442 >UniRef50_A7IBA4 Sun protein n=6 Tax=Rhizobiales RepID=A7IBA4_XANP2 Length = 471 Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 138/390 (35%), Positives = 199/390 (51%), Gaps = 21/390 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R +A +EQV+ G +L + L + +D+AL + LR + L LI KLM Sbjct: 48 RILAVDGLEQVLRHGAALEDALD-ADVALDPRDRALAYRILATSLRRIGTLRALIAKLME 106 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGLINGVLRQFQ 126 R + + +++ G Q+L+ +P HAA+ V+ A A + GL+N VLR+ Sbjct: 107 RGLPKSAPRLESVLLAGATQILFMDVPNHAAVGLCVDVARADRNTAGFAGLVNAVLRRLT 166 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSR 185 R+ + L+ + A P W+ +R KAY E ++I + PP+ + + Sbjct: 167 READALMVGISPDFADT--PEWMGQRWIKAYGLETTRAIAAMHKVEPPLDITVKADPAL- 223 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 W L + P +VR+ PV ALPGF +G VQDA+A L Sbjct: 224 --WAERLSG---EVLPTG----SVRILQAGPVRALPGFAEGDWWVQDAAAALPARLLGDV 274 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 G + DLCAAPGGKT + A A V AVD RL+R+ +NL+RL + A V GD Sbjct: 275 KGLKVADLCAAPGGKTAQL--AAAGAIVTAVDRSSSRLTRLKENLERLKLSAQVVAGDA- 331 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 + + G FD +LLDAPCSATG +RRHPDI +R D+ LA LQ+ ++ LK Sbjct: 332 --ADFSG-GPFDAVLLDAPCSATGTLRRHPDIAVNKRPGDLVTLAGLQARLIAHAADLLK 388 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTAD 395 GGTLVY+TCS+ PEE Q++ L +D Sbjct: 389 PGGTLVYSTCSLEPEEGEQQVERLLAARSD 418 >UniRef50_D2RNU3 Sun protein n=3 Tax=Veillonellaceae RepID=D2RNU3_ACIFE Length = 446 Score = 184 bits (466), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 127/404 (31%), Positives = 211/404 (52%), Gaps = 23/404 (5%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQ-----KVSDKDKALLQELCFGVLRTLSQLD 59 +N R A +EQ+ +G + +N+ L Q +S D+ L EL +G ++T+ LD Sbjct: 6 KNPREAALLILEQIFLRG-AYANL--ALDQGLRGATLSPLDRKLTTELVYGTVKTMGTLD 62 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 W +++++ RP+ V ++ +G YQLLY RIP AA E+V+ A L+ Sbjct: 63 WYLSRVVNRPLRKLDPLVLVILRLGAYQLLYLDRIPASAACNESVKLAKKWVHEGAGKLV 122 Query: 119 NGVLRQFQRQQEELLA------EFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 NG LRQ R +++ E Y HP WL++R + Y E+ + +N R Sbjct: 123 NGALRQLARTRDQWKFPQGPDHELERIALEYYHPEWLVRRWKFRYGLEEAVKLCAFDNAR 182 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTV 230 P R+N +R+ L E G++ P PD + ++ P+ + GF + + Sbjct: 183 PAFSFRVNTLRDTREGLQEKLAEKGIRTRPSQWSPDGLLCDSLPSLDDLVEGFGPD-IYI 241 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDN 289 QD S+ L PQ GE +LDLC+APGGKTTH+ + + + +++A+D+ + +L V +N Sbjct: 242 QDESSMLDAAVLDPQPGERVLDLCSAPGGKTTHLAQKMQDQGEILALDLYDHKLDLVREN 301 Query: 290 LKRLGMKA--TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 +RLG+ T KQ + +W E R+L+DAPCS GV+ R + +W + +R + Sbjct: 302 ARRLGIHCIRTEKQDGTVFVPEW--ENTAHRVLVDAPCSGLGVLNRRAEARWTKEERSLS 359 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ 391 + LQ +IL ++ GG L+Y+TC++ +EN+ K FL+ Sbjct: 360 QFPPLQKKILANGARYVMPGGRLLYSTCTLEQDENTRVRKWFLE 403 >UniRef50_A7VUU4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUU4_9CLOT Length = 446 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 128/444 (28%), Positives = 216/444 (48%), Gaps = 24/444 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPP---LQQKVSDKDKALLQELCFGVLRTLSQ 57 M +N R A +A+ +V E+G+ SN++ + +D A L +GVL Sbjct: 1 MSAGKNARLTALKALLRV-EEGKGYSNLVLDHGLAASGLDGRDAAFASALFYGVLERRIT 59 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKG 116 LD+ I++ P++ V ++ +G YQLLY ++P AA+ E+V+ A+K+ + G Sbjct: 60 LDYQISRYSKMPLSQMAAPVREILRLGFYQLLYMDKVPQSAAVNESVKLTRAVKKDKASG 119 Query: 117 LINGVLRQFQRQQEELLAEFNASD----ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 +NG+LR F R +D +Y P W++ +Y E+ +VE R Sbjct: 120 FVNGILRSFIRDGCPCRLPAETADDYLMVKYACPQWIIDLWITSYGRERALELVENLTGR 179 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 PP+ +R+N +R++ L E G++ A+ LE + +L F+DG+ VQ Sbjct: 180 PPLAVRVNSCKTTREALTERLKEEGVETKEVPGVEQALTLERSGSIESLSSFQDGFFHVQ 239 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNL 290 D ++Q C L+P+ GE + D+CAAPGGKT + E+ + ++ + D+ ++ + Sbjct: 240 DLASQLCCQALSPKPGERVYDVCAAPGGKTFTMAELMENQGELSSFDLYPAKVKLIQQGA 299 Query: 291 KRLGMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 KRLG+ + D +P + D++L D PCS G+IRR P+I++ ++ + L Sbjct: 300 KRLGLSVVNARIRDAAHPEEMLPPG--DKVLCDVPCSGLGIIRRKPEIRYKNKNM-LDSL 356 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK 409 LQ IL K G L+Y+TC++ P EN+ + FL D E PE + Sbjct: 357 PDLQYLILCISANLTKKHGVLLYSTCTLNPGENNQVARRFLLEHPDFEPYPVSLPEGYER 416 Query: 410 QNLPGAEEG---------DGFFYA 424 + E DGFF++ Sbjct: 417 NSFDRENEATLFVKKNGTDGFFFS 440 >UniRef50_C0WD86 SUN protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD86_9FIRM Length = 445 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 133/443 (30%), Positives = 216/443 (48%), Gaps = 23/443 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQL 58 M +N R +A ++++ E+G + L + +S D+ L EL +G ++T L Sbjct: 1 MHDAQNPRELALLVLDEIYERGAYANLALNKALRGNGLSSLDRKLCTELVYGTVKTTGTL 60 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 DW + +++ RP + ++ +G YQ+LY RIP AA+ E A L Sbjct: 61 DWYLCRVINRPFRKMAPRLRTILRMGAYQILYLERIPDSAAVNECANLARYYVNENSVKL 120 Query: 118 INGVLRQFQRQQEELLAEFNASDAR------YLHPSWLLKR--LQKAYPEQWQSIVEANN 169 +NGVLRQ R + DA Y HP WL++R + PE +++ +N Sbjct: 121 VNGVLRQLSRTKATWQFPQKEEDATLRLALTYYHPEWLVRRWKFRFGLPEA-EAMCAYDN 179 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 P + LR+N SR + L L G + P PD + + L ++ Sbjct: 180 AVPSLCLRVNTLFISRKTLLERLQADGCEVEPSKWSPDGIVCRHLPSLETLMKEWGRFLY 239 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYD 288 +QD S+ LAP+ G+ +LD CAAPGGKTTH+ + + + +++A+DI + RL+ + + Sbjct: 240 IQDESSMLDADVLAPKPGDLVLDFCAAPGGKTTHLAQKMENKGKIIAMDIHDHRLTLIEE 299 Query: 289 NLKRLGM---KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 N RLG+ +A + G P E + D +L+DAPCS GV+ R + +W +++R Sbjct: 300 NATRLGITNIRALLHDGTKPLPG---FENRADAVLVDAPCSGLGVLNRRAEARWTKKERT 356 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR----TADAELCET 401 + + LQ +IL +K GG L+Y+TC++ +ENS AFL+ + A L Sbjct: 357 LSQFPPLQKKILAQAAACVKPGGRLLYSTCTLERDENSRVRTAFLESHPEFRSKAFLHPV 416 Query: 402 GTPEQPGKQNLPGAEEGDGFFYA 424 Q LP + DGF+ A Sbjct: 417 TGERVEELQILPWRDGIDGFYLA 439 >UniRef50_A4XL79 Sun protein n=2 Tax=Clostridia RepID=A4XL79_CALS8 Length = 433 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 123/404 (30%), Positives = 204/404 (50%), Gaps = 29/404 (7%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAA 98 D+AL EL GVLR + LD+ IN + + + K + + ++ + Y+LL+ +IP +A Sbjct: 40 DRALFVELVHGVLRYKNILDYYINFVAKKGV--KDKKILNILRIATYELLFLDKIPDYAT 97 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL------LAEFNASD---ARYLHPSWL 149 + E E A + + Q K +N +LR R+++E+ + E N D + +P +L Sbjct: 98 VNEACELAKNVNKNQ-KDFVNAILRNIIRRKDEIEKALERVKEVNIKDFLSIKLSYPKFL 156 Query: 150 LKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDA 208 + L+K+Y ++ I+E N +P ++IN S+ +L L+ G + + + Sbjct: 157 IDYLEKSYGFDKTVKILEFLNTKPLQSIKINTKKISQAEFLKKLEACGYE-YKVPELNRE 215 Query: 209 VRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP--QNGEHILDLCAAPGGKTTHILE 266 + + + DG+ QD ++ + W + ILDLCAAPGGKT + E Sbjct: 216 IVYIVKGNIKESELYRDGYFYYQDLASSFIVKWNRDDFEKASSILDLCAAPGGKTFNCAE 275 Query: 267 VAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQ-WCGEQQFDRILLDAP 324 V VV+ D+++ ++ R+ +NL RLG V + D ++ + G +FD ++ D P Sbjct: 276 VT-RGFVVSCDVNKSKIERLRENLLRLGFDNVVVAENDALTLNEDFVG--KFDIVIADLP 332 Query: 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSL 384 CS G IR+ PDIKW + DI L +LQ ++LD +LK GG + Y+TC++ EN Sbjct: 333 CSGFGTIRKKPDIKWNKTKEDIENLHELQLKMLDNAAQYLKEGGIIFYSTCTLGHRENED 392 Query: 385 QIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + FL++ D L T P + DGFF AKL K Sbjct: 393 TVLKFLEKHKDFSLISQNTI-------FPDEYKCDGFFIAKLKK 429 >UniRef50_Q2RN41 tRNA and rRNA cytosine-C5-methylase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RN41_RHORT Length = 438 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 143/432 (33%), Positives = 210/432 (48%), Gaps = 32/432 (7%) Query: 15 VEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQ 74 + V++ G+ L ++ +K+ +D+A + L LR + +L+ +I + RP+ + Sbjct: 16 LSAVLDHGRPLDDVFDAATRKLEPRDRAFARLLAATTLRRMGRLEKVIKTFLDRPLPRRA 75 Query: 75 RTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLA 134 +++ +G Q+L+ PPHAA+A +V+ A + GLIN VLR+ LA Sbjct: 76 VGAKHILRLGAAQMLFLDTPPHAAVATSVDVARVRRLAPYAGLINAVLRKVADHGAARLA 135 Query: 135 EFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLD 193 F+ D P WL + AY E + EA + P+ L T D AL + Sbjct: 136 GFD--DPLADLPRWLGQSWIAAYGAETAARLAEACGREAPLDL----TPRDGDGG-ALAE 188 Query: 194 EAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA-PQNGEHILD 252 G P +VRL T V L GF +G VQDA+A + P G ++D Sbjct: 189 LVGGLALPGG----SVRLPTATAVRELAGFTEGQWWVQDAAAALPVLLAGVPLKGARVVD 244 Query: 253 LCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQW 310 CAAPGGKT + A AQV AVD RL+R+ +NL+R G+ V +GD + Sbjct: 245 FCAAPGGKTLQL--AAAGAQVWAVDRSATRLARLRENLERTGLGDAVNVVEGDALTFTLT 302 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 G QQ D +L+DAPC+ATG RRHPD WL+R D LA LQ +LDA ++ GG + Sbjct: 303 DG-QQADVVLVDAPCTATGTFRRHPDAPWLKRPGDAAALAALQDSLLDAAVRLVRPGGVI 361 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEG------------ 418 VY CS+ PEE + +I+A L R+ + E + AE Sbjct: 362 VYCVCSLQPEEAAPRIEALLARSPEISRKPITAGEGGVSDEMITAEGDVRLFPFHLDAVG 421 Query: 419 --DGFFYAKLIK 428 DGFF A+L++ Sbjct: 422 GLDGFFIARLVR 433 >UniRef50_A8RWU3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8RWU3_9CLOT Length = 455 Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 123/432 (28%), Positives = 200/432 (46%), Gaps = 17/432 (3%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R + + +V+EQG + +L QK + D++ + G L L Q+D +IN+ Sbjct: 12 REIVLDILTEVLEQGAFVHLVLNQALQKYQYLGKADRSFITRAVEGTLEYLIQIDEVINR 71 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + + L+ + +YQ+LY R+P A E V+ A+ LKG +NGVLR Sbjct: 72 YSKTKINKMKPFIRSLLRMSVYQILYMDRVPDSAVCNEAVKMAVKRHFSGLKGFVNGVLR 131 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTH 182 R++E L F+ RY P W+ +K + E+ + I + + P W+R N Sbjct: 132 TISREKENL--TFDTPSLRYSIPEWMYAMWEKEFGKEKAEKIAASFLEDKPTWVRCNLHR 189 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R+S LA L G + ++ + L F GW+ VQD ++ Sbjct: 190 ADRESILASLKAQGTSVRELPFMESMIAIDGYDYLEGLDAFRKGWIQVQDVTSAFVGEIA 249 Query: 243 APQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 +P+ +I+D+CAAPGGK+ H+ + + V A D+ Q+ + + +N+ R G+ Sbjct: 250 SPEKDSYIIDVCAAPGGKSLHLADKLEGTGMVEARDLTYQKTALIEENMARCGVTNMKTL 309 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 + + D ++ D PCS G+I R PDIK+ + ELA LQ EIL +W Sbjct: 310 VWDALETDLSAMAKADIVIADLPCSGLGIIGRKPDIKYNMTPEKLEELAGLQREILSVVW 369 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRT----ADAELCETGTPEQPGKQN-----L 412 ++K GG L Y+TC++ EN R D G P++P ++ L Sbjct: 370 QYVKPGGLLCYSTCTIDRLENQDNAAWLRDRFPLVPVDLTDRFGGLPQEPSLKDGWIQFL 429 Query: 413 PGAEEGDGFFYA 424 PG DGFF + Sbjct: 430 PGVHPYDGFFIS 441 >UniRef50_D1BMC4 Sun protein n=3 Tax=Veillonella RepID=D1BMC4_VEIPT Length = 451 Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 135/449 (30%), Positives = 224/449 (49%), Gaps = 34/449 (7%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDW 60 +Q+N+R +A +A+ ++ G + L QK +SD D+ EL +GV+R + LD Sbjct: 8 QQQNIRLLAVKALSEINRNGAYANIKLQEYLQKYHLSDLDRRFFTELVYGVIRRKNYLDA 67 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I RP+ V ++ +G+YQ++Y ++P AA+ E+V+ A + R L G +N Sbjct: 68 IIVFFAKRPIKKLSSMVLEILRLGIYQIIYMDKVPESAAVNESVKLAKKLTRG-LSGFVN 126 Query: 120 GVLRQFQRQQEEL-LAEFNASDAR-----YLHPSWLLKR-LQKAYPEQWQSIVEANNQRP 172 VLR R+ + + + E S+A Y P WL+ +++ ++ + N++P Sbjct: 127 AVLRSVLRESDSISIGELAKSEAEEISFIYNQPLWLVNFWIKEMGKDKTVDLCAWFNEQP 186 Query: 173 PMWLRINRTHHSRDSWLALLDEAGM-----KGFPHADYPDAVR--LETPAPVHALPGFED 225 + RIN S + L L++ P Y D + LE PV D Sbjct: 187 RLTSRINTVKVSIEDCLKELEDLDWIVEQDTYIPEVVYIDGHQGHLEKAKPVL------D 240 Query: 226 GWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLS 284 G +T D ++ + PQ GE ILD CAAPGGK+ H+ + +++ DI + +L Sbjct: 241 GHITFMDKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDHKLE 300 Query: 285 RVYDNLKRLGMKA-TVKQGDGRY-PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRR 342 + N +RLG+ + K DGRY P W ++QFDR+L+DAPCS G++++ D++W + Sbjct: 301 LINQNAERLGVSIISTKLQDGRYLPDNW--KEQFDRVLVDAPCSGLGILQKKLDMRWRKT 358 Query: 343 DRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL---QRTADAELC 399 + + EL LQ EIL+ +K G LVY+TC++ EN + FL + + Sbjct: 359 ESLLIELPPLQLEILEKASKMVKVNGYLVYSTCTMNSGENEAVLNKFLAIHKNFIIDPVS 418 Query: 400 ETGTPEQPGKQ--NLPGAEEGDGFFYAKL 426 G P+ P + DGFF A++ Sbjct: 419 YKGAPQAIDGMITTYPPRDHMDGFFMARM 447 >UniRef50_Q7A601 SA1060 protein n=63 Tax=Staphylococcaceae RepID=Q7A601_STAAN Length = 461 Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 127/444 (28%), Positives = 220/444 (49%), Gaps = 34/444 (7%) Query: 6 NLRSMAAQAVEQVVEQGQ----SLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 N+RS+A ++ ++ +G ++ +L + +++ DKAL E+ +G ++ LD+ Sbjct: 30 NVRSLAFDTIQDILNEGAYSNLRINEVLS--ENELNAMDKALFTEIVYGTVKRKYTLDFY 87 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLING 120 + + + R L+ + +YQ +Y ++P HA + E VE A ++NG Sbjct: 88 LKPFVKTKIKAWVRQ---LLWMSIYQYVYLDKVPNHAIINEAVEIAKERGGYHNGNVVNG 144 Query: 121 VLRQFQRQQEELLAEFN-ASDAR------YLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 +LR R L +FN +D + Y P W++ Y E+ ++I+++ + Sbjct: 145 ILRTMMRSD---LPDFNEIADPKKRMAIEYSMPKWIIDHWATHYGLEETETILQSFLETT 201 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 +R N T S D + L + G D P + + +H+ F+DG+V++QD Sbjct: 202 STTVRANLTRASLDDIIEKLQDEGYDVEKDHDLPYCLHIGGQPIIHS-RSFKDGFVSIQD 260 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLK 291 S+ + +H+LD C+APGGK HI EV PE QV A DI + ++ + N+K Sbjct: 261 KSSMFVAHIMNVDRHDHVLDACSAPGGKACHIAEVLMPEGQVDASDIHDHKIDLINFNIK 320 Query: 292 RLGMKATVK--QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 +L + +K Q D P ++ +D+IL+DAPCS GV+R P+IK+ + + I L Sbjct: 321 KLRL-TNIKAFQHDATKPY----DKTYDKILVDAPCSGLGVMRHKPEIKYTQSKQHIESL 375 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ--- 406 +LQ EIL+ + ++K GG ++Y+TC++ EN I FL+ + E P Sbjct: 376 VELQLEILENVKNNVKIGGEIIYSTCTIEQLENENVIYTFLKNNKNFEFEPFQHPITGEL 435 Query: 407 -PGKQNLPGAEEGDGFFYAKLIKK 429 Q +P DGFF K+ +K Sbjct: 436 VKTLQIMPQDFNSDGFFITKIKRK 459 >UniRef50_C5RAE2 RNA methyltransferase n=3 Tax=Lactobacillales RepID=C5RAE2_WEIPA Length = 456 Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 140/446 (31%), Positives = 219/446 (49%), Gaps = 27/446 (6%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNI-LPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 N R+++ + +E+V Q + SN+ L + Q +S+K+ L+ + +GV++ L++ + Sbjct: 16 NPRALSVRVLEKV--QNGAYSNLQLDSMIKQADLSEKNVHLMTTMVYGVIQHRLTLEYWL 73 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + +P + V L+ + ++Q+ Y +IP HA E + A + + GV Sbjct: 74 IPFIKQPQK-LESWVRELLYISIFQMQYLDKIPDHAIFDEAINIAKRRGHDGTRKFVTGV 132 Query: 122 LRQFQRQQ----EELLAEFNASDARYLHPSWLLKRL--QKAYPEQWQSIVEANNQRPPMW 175 L QRQ E++ E + P WL++ L Q +P+ SI N P Sbjct: 133 LHAIQRQGLPDFEDIKDETKRLSIKTSLPLWLIETLNGQLGWPKTV-SIASTINAAPSQS 191 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R+NR S + LL+ G + P PDA+ L + V F DG +T+QD SA Sbjct: 192 VRVNRELISPTDLIKLLENDGYQVTPSEVTPDAL-LVSGGHVAGSQAFHDGLLTLQDESA 250 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHI---LEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 + L G+ +LD AAPGGKTT I LE VVA+DI + + + +N R Sbjct: 251 MLMVPSLDVHPGDKVLDAAAAPGGKTTQIATYLEKTQGGHVVALDIHDHKAKLIKENATR 310 Query: 293 LGMKATVKQG--DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 L + ++ D R + ++ FDRIL+DAPCS G++RR P+I++ + +D +L Sbjct: 311 LQVADRIETQVLDARKVDEKFKDETFDRILVDAPCSGFGLLRRKPEIRYEKSLKDSYQLQ 370 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE----- 405 ++Q ILDA+ LK GG LVY TC++L EN I FL D +L T T Sbjct: 371 KIQLSILDAVANKLKKGGRLVYGTCTILSTENEDVINEFLAAHNDFKLVPTKTVNNLDVL 430 Query: 406 --QPGKQNLPGAEEGDGFFYAKLIKK 429 Q P DGFF A L+K+ Sbjct: 431 DTQGMLHVYPDDFGSDGFFIATLVKQ 456 >UniRef50_Q16CE2 RRNA methyltransferase RsmB n=15 Tax=Rhodobacterales RepID=Q16CE2_ROSDO Length = 423 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 144/393 (36%), Positives = 201/393 (51%), Gaps = 32/393 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPP-LQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R A ++Q++ +G+ +S +L K+ +D+A L LR L + D ++ K + Sbjct: 9 RRSAVYLLDQILGEGRLMSELLTAGTLDKLEPEDRARAARLAQDTLRGLERADRILQKHL 68 Query: 67 AR--PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLKGLINGVLR 123 ++ P+T V + VG +L T H + VE K LKGL N VLR Sbjct: 69 SKYPPLT-----VRNALRVGAVELC-TGTAAHGVVNAMVELVSRHKHYSHLKGLTNAVLR 122 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVE-ANNQRPPMWLRINRTH 182 + A ++A A L P WL L +A+ + +E A+ P+ L T Sbjct: 123 KVAADGP---AAWDALRAPRL-PKWLRGPLVEAWGADAMARMEIAHFAGAPLDL----TA 174 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 S S +A L G P +VR+E V A+PGF DG VQDA+A + L Sbjct: 175 KSDASAIAAL--TGGTVLPTG----SVRVENAGQVSAMPGFSDGTWWVQDAAAALPVRIL 228 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 APQ GE +LDLCAAPGGKT + A A+V AVD R+ RV +NL R G+KA V Sbjct: 229 APQPGETVLDLCAAPGGKTMQL--AAAGARVTAVDDSSVRMGRVAENLARTGLKAEVLVQ 286 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 D R S FD +LLDAPCSATG IRRHPD+ + + +L +QSE++D W Sbjct: 287 DARATSG-----TFDAVLLDAPCSATGTIRRHPDLPHAKDGSEFGDLIAMQSELIDHAWD 341 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD 395 +K GG LV+ TCS+LP+E +Q+ L+R D Sbjct: 342 RVKPGGRLVFCTCSLLPDEGEVQVDEALERHED 374 >UniRef50_C0EFK3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFK3_9CLOT Length = 441 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 131/440 (29%), Positives = 206/440 (46%), Gaps = 26/440 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQ----SLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLD 59 R R +A A+ ++ +QG + +L +S +D+ +L +GVL T LD Sbjct: 3 NRTARDLALSALLKMDKQGAYSNLAFDGMLS--SSSLSPRDRDFAAKLFYGVLETKITLD 60 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 ++I V ++ +GLYQ+ Y + AA+ E+V + G +N Sbjct: 61 YIIASYATMKPEKISSDVRNILRLGLYQIKYLDLEDFAAVNESVNLVKLRGKKSASGFVN 120 Query: 120 GVLRQFQRQQEELLAEFNASD---ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 +LR F R + + + + R+ P WL++ Y E + I+E+ RPP+ Sbjct: 121 AILRAFLRDGKNIPLPEDPDERLSVRFSCPVWLVRSFVGEYGRETAERILESQLGRPPLT 180 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 LR+N S ++ ALL + G++ PH V + + F +G VQD S+ Sbjct: 181 LRVNTLKTSAETLCALLQQEGIEAVPHPQEQTCVEVLGGGALTGTKAFAEGLFHVQDISS 240 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 Q C +A +LD+CAAPGGKT I E+ A++ A D+ ++R+ + RLG Sbjct: 241 QLCARTVASYAPRTLLDVCAAPGGKTFTIAEELGDAAEITACDLHKKRVGLIKQGAARLG 300 Query: 295 MKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + + + D + G QFD +L D PCS GVIRR P+IK+ + + L +Q Sbjct: 301 LCSVDAVESDASKANDRFG--QFDAVLCDVPCSGFGVIRRKPEIKY-KPQESLQGLPAIQ 357 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT---ADAELCETGTPEQ--PG 408 IL ++K GG L+Y+TC++ EN + FL+R A+L G Q P Sbjct: 358 GNILQTSASYVKEGGMLIYSTCTIAKRENEQVVDEFLRRNPAFVPAKL--PGFLHQWVPD 415 Query: 409 KQN----LPGAEEGDGFFYA 424 N LPG DGFF A Sbjct: 416 AVNRVTFLPGVHNSDGFFLA 435 >UniRef50_UPI0001BC65B2 16S rRNA m(5)C 967 methyltransferase n=2 Tax=Fusobacterium RepID=UPI0001BC65B2 Length = 440 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 127/421 (30%), Positives = 220/421 (52%), Gaps = 30/421 (7%) Query: 14 AVEQVVEQGQSLSNILPPL-QQKVSDK-DKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 A+ Q V+QG+ + L L +KV K +K + E+ +GV+R LD++I++ + Sbjct: 9 ALLQEVDQGKYSNIALNELFHRKVFKKGEKNFITEVFYGVIRNKIYLDYMISQKVKEV-- 66 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR---Q 128 K+ + L + YQ+ + + + E VE A + +NGVLR FQR + Sbjct: 67 -KKDWLQQLFRLSFYQIRFMKSDDKGVIWEGVELAKKKYGVSVSRFVNGVLRNFQRSFIE 125 Query: 129 QEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSW 188 +EE L + + +P W ++++K PE++ I+++ + P + +R+N +S + + Sbjct: 126 EEENLKREGREEVLFSYPKWFFEQIKKESPERYIEILKSLKRTPLLSVRVNLLKYSCEEF 185 Query: 189 LALLDEAGMKGFPHAD---YPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 L + ++ + Y A L + F++G + VQDA++ L + Sbjct: 186 EEYLRKEEIEIIKKVETIYYTKAGNLLNSSE------FQEGKIIVQDAASYLAAKNLGAK 239 Query: 246 NGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-- 302 GE +LD C+APGGKT+ + E + E Q++++DI ++ + +N K+LG+ T+ Q Sbjct: 240 PGEIVLDTCSAPGGKTSVLAEAMKNEGQILSLDIHTHKIKLIQENCKKLGI--TIVQAVK 297 Query: 303 -DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 D R+ S ++FDRIL+DAPCS GV+ + P+ + +++ +I EL LQ EIL A Sbjct: 298 LDARHLS--LQGKKFDRILVDAPCSGYGVLAKKPEGLYNKKEENIKELVTLQREILMAAA 355 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 LK GG +VY+TC++LP EN K FL+ + E + PE N+ G + G Sbjct: 356 EVLKVGGEMVYSTCTILPAENQENAKWFLETHPNFESIQLQIPE-----NVAGTYDDCGG 410 Query: 422 F 422 F Sbjct: 411 F 411 >UniRef50_C5SHX2 Sun protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SHX2_9CAUL Length = 464 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 141/406 (34%), Positives = 203/406 (50%), Gaps = 34/406 (8%) Query: 35 KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIP 94 K+S+ ++A L VLR L QLD +I+K + V L+ +G+ Q+ + ++P Sbjct: 74 KLSETERAFAGALALLVLRRLGQLDHVIHK---KTQKMPPEAVRQLLRIGMAQIFFMQVP 130 Query: 95 PHAALAETVEGAIAIKRPQ-LKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRL 153 AA++ TV+ A + + KGLIN +LR R + L++ N + L P WL +R Sbjct: 131 DFAAVSTTVKIAERENKTRPFKGLINAILRGLIRDGK--LSDVNP---KRLVPDWLWQRW 185 Query: 154 QKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET 213 + Y E+ + + + P R RD L EA ++G A P +R Sbjct: 186 VQTYGEENAAGMASVLTEEPATDLSFRNPTDRDG----LAEA-LQG--EAVGPVNLRSSL 238 Query: 214 PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQV 273 + ++ G VQD +A + L NG+ LD+CAAPGGKT + +A AQ Sbjct: 239 RGDLRQWADYDAGKWWVQDIAAATPVNLLGDLNGKTALDVCAAPGGKTLQL--IAKGAQT 296 Query: 274 VAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRR 333 VA+D + RL RV DNLKR+GM A + D S + + FD +L+DAPCSATG RR Sbjct: 297 VAIDRSKNRLKRVEDNLKRIGMSAEIHNADA---STFDDPRAFDVVLVDAPCSATGTYRR 353 Query: 334 HPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 PD+ W R D+ +LA +Q +LDA+ P +K GG +Y TCS+ EE QI AFL+R Sbjct: 354 QPDVLWATRPADVAKLADVQHRLLDALAPRVKPGGDFLYCTCSLEREEGETQILAFLRRN 413 Query: 394 ADAELCETGTPEQPGKQNLPGAEEG-------------DGFFYAKL 426 D L + + P A EG DGFF A L Sbjct: 414 KDFTLVKHTADQHPDIPAASFAPEGWLRLLPHQRKGGQDGFFVAHL 459 >UniRef50_B3QZ49 Sun protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QZ49_CHLT3 Length = 443 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 132/416 (31%), Positives = 212/416 (50%), Gaps = 38/416 (9%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAA 98 D+A ++ +G LR ++D +I + V ++ +G YQLL+ +++P AA Sbjct: 39 DRAFTMQIVYGTLREKMKIDHVIKQFYRHDYDKMDIDVKNILRIGAYQLLFLSKVPRWAA 98 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDA--------RYLHPSWLL 150 + E+VE A +K L L+NGVLR E + +F+ +Y HP WLL Sbjct: 99 VNESVELAKKLKGQFLGNLVNGVLRNISNNLESV--DFSIQGGTFADQIALKYSHPRWLL 156 Query: 151 KRLQKAYPE-QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAV 209 +R Y + Q+I+EANN P + RINR ++ + + L + F + PD V Sbjct: 157 ERWISTYGFLEAQNIMEANNLIPRIAFRINRLKNAPEKFQQKLLAENVT-FRKSILPDFV 215 Query: 210 RLETPAPVHAL-PGFEDGWVTVQ-DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV 267 P L P G V+VQ +A A C L PQ G+ +LD+CAAPGGK+T++ E+ Sbjct: 216 ---IPDRFFDLEPFLSTGEVSVQSEAQALAC-RLLNPQPGQKVLDMCAAPGGKSTYLAEM 271 Query: 268 APEA-QVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAP 324 A Q+ ++D+ + +L + LG+ +T+K R+ E+ FD ILLDAP Sbjct: 272 MANAGQITSLDLYDNKLEDIDRLASALGIDIISTIKHDATRFSH----EEGFDAILLDAP 327 Query: 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSL 384 C+ TGV+ R +++W + D+ L+ LQ ++L+ K +VY+TCS+ PEEN + Sbjct: 328 CTGTGVLSRRAELRWRLSEADLAALSNLQYQLLENAAKMAKPDAAIVYSTCSIEPEENQV 387 Query: 385 QIKAFLQRTADAELCETGTPEQPGKQN-----------LPGAEEGDGFFYAKLIKK 429 I+ FL + +L ++ P + + LPG DG F A+L++K Sbjct: 388 LIEKFLNAHPEWQL-QSAIEILPDEFHEVVHDKGYISLLPGKNGFDGAFSARLVRK 442 >UniRef50_C4G2S0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S0_ABIDE Length = 455 Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 113/358 (31%), Positives = 186/358 (51%), Gaps = 14/358 (3%) Query: 41 KALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAAL 99 + + L G + + LD++IN P+ + + L+ +YQ+ + R+P AA+ Sbjct: 41 RGFITRLYEGSIEKMIYLDFVINSFSKTPVKKLKPIIKILMETAVYQIFFMDRVPDSAAI 100 Query: 100 AETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL-LAEFNASDARYLH-----PSWLLKRL 153 E V+ A L G +NGVLR R +E + L + + RYL P + + Sbjct: 101 NEAVKLAKKRGLAGLSGFVNGVLRNIARNRENIALPDKDKEYIRYLEVKYSMPKEVTEHF 160 Query: 154 QKAYPE-QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE 212 K Y Q + I+EA ++ P+ R+N T +R+ + L E +K +P+++++ Sbjct: 161 IKEYGNVQAEEILEAFEKKQPIVARVNGTRLTREELVKKLTEEDVKVSTDTVFPESLKIL 220 Query: 213 TPAPVHALPGFEDGWVTVQDASAQ--GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE 270 ++ L FE+G +QD S+Q G + L PQN + +LD+CAAPGGKT + E PE Sbjct: 221 ELDSLNFLESFENGDFVIQDESSQFIGKIAEL-PQNAK-VLDICAAPGGKTLLMAE-KPE 277 Query: 271 AQ-VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATG 329 A+ + A DI E++ + +N+ R+G+K + + E+ FD ++ D PCS G Sbjct: 278 AERITACDISEKKTGLIEENINRMGIKKVITMVNDATVFNKKFEEDFDLVICDLPCSGLG 337 Query: 330 VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 VI R DIK+ I ELA+LQ EIL+ ++K GG L+++TC++ EN K Sbjct: 338 VIGRKRDIKYNITGNKIKELAKLQREILENAGKYVKKGGYLIFSTCTMSKLENEENFK 395 >UniRef50_Q0AXL7 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXL7_SYNWW Length = 456 Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 127/446 (28%), Positives = 217/446 (48%), Gaps = 26/446 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQLDWLINK 64 R MAA+ V +V+E+G + +N+ + SD D+ LL E+ G +R + LDW++ Sbjct: 13 RIMAAEIVYEVMERG-AFANLALAKALRNSDLSAADRHLLTEIVNGTVRMIKHLDWVLEL 71 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + P+ + + ++ LYQL++ ++P +A + + VE + ++ G+ N VLR Sbjct: 72 FLHSPIKKQNPYLLSILRTALYQLMFLAKVPDYALVNDAVEISRQKMGAKMAGVSNAVLR 131 Query: 124 QFQRQQEELLAE---FNASDARYLHPSWLLKR-LQKAYPEQWQSIVEANNQRPPMWLRIN 179 R+ +++ + Y HP WL+K L + ++++ NN R + LR N Sbjct: 132 NIIRKLDKIKYPDDPVSFYSIYYSHPDWLVKLWLDTLGTQACETLLAYNNSRSRVVLRCN 191 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE-TPAPVHALPGFEDGWVTVQDASAQGC 238 SR+ + L+E G+K P + +E P P+ F+ G+ +Q+ ++ Sbjct: 192 PLKCSREELIDKLEEEGVKAQLSPLTPWGIVVEDNPQPIAETASFKKGYFYIQNEASMLA 251 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 L P GE +LDLC GGKTTH+ E + + +V+AV+ Q+L + N +RLG+ Sbjct: 252 AAILNPPAGERVLDLCCGVGGKTTHLAEYMNNQGEVLAVEFYAQKLELLRQNCQRLGL-G 310 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 VK + + E + +LLDAPCS GV+ R D +W + +I EL QLQ++ + Sbjct: 311 IVKDLEKDIRTLNSKEVKARYLLLDAPCSGWGVLNRRADARWRKNQEEINELTQLQAQFI 370 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT---------ADAELCETGTPEQPG 408 ++ G L+YATC++ EN I+ FL+ + P++ Sbjct: 371 SHAATMVEKQGYLLYATCTINQAENEEIIEGFLEENQHFVLEGFLSKLSFFPLDKPDKAS 430 Query: 409 KQN-----LPGAEEGDGFFYAKLIKK 429 +PG DG FYA L +K Sbjct: 431 ANRGMLTLMPGKYGTDGMFYALLRRK 456 >UniRef50_A3VQU7 TRNA and rRNA cytosine-C5-methylase-like protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQU7_9PROT Length = 455 Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 134/443 (30%), Positives = 215/443 (48%), Gaps = 45/443 (10%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 AA + + +GQ+L + + + + D+ + L VLR + LD + R Sbjct: 33 AALDILLAIRRGQALDMAMAESEAFEDLEGADRGFARTLIMAVLRRQNTLDEAYGTFLDR 92 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKG---LINGVLRQF 125 P+ Q TV L+ + Q+L +PPHAA A TV+ +A +R G L+N + R+ Sbjct: 93 PLKSTQGTVITLLRLAAAQILLLGVPPHAATATTVD--LAKERRDSAGFAKLLNALCRRM 150 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 + L+ ++ R P WL +RL++ Y + + A + P + R Sbjct: 151 VEKGPSLIEDYPP---RTDVPGWLWRRLERHYGAKTARRLAAAFVQEPALDLTPKDPKER 207 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 + L+ H P ++R + LPG+ +G +QD +A ++ L Sbjct: 208 ERLATALEA-------HPLGPVSLRRTAGGRIEDLPGYTEGDWWIQDLAAALPISLLGDL 260 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD-- 303 G+ + DLCAAPGGKT + A A V AVDI +RL R+ DNL RLG++A GD Sbjct: 261 TGQRVYDLCAAPGGKTAQL--AAAGAHVTAVDISAKRLRRLEDNLARLGLRADTFVGDVL 318 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 G P ++ D ++LDAPC+ATG +RRHPD+ W +++ D+ EL+ LQ ++L Sbjct: 319 GFSP-----DEPADLVVLDAPCTATGTVRRHPDLLWSKKEEDVAELSALQDQMLHHAARL 373 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTA--DAELCETGTPEQPGKQNLPGAEEG--- 418 ++ GG L++ TCS+L EE + +AFL R + AE E+ G N A++G Sbjct: 374 VRPGGRLMFITCSLLAEEGEDRSRAFLSRHSQFTAEPLSDDEKERLGPLN--AAKDGHLR 431 Query: 419 ------------DGFFYAKLIKK 429 DGF+ A+ ++ Sbjct: 432 TRPDLIADAGGMDGFYAARFTRQ 454 >UniRef50_A4U1B3 Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p:Antitermination protein NusB n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1B3_9PROT Length = 437 Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 146/436 (33%), Positives = 210/436 (48%), Gaps = 34/436 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNIL--PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 RS+ +E V+ Q + L L P K++++D+A + L LR L Q+D +I + Sbjct: 15 RSIVLDLLECVLAQKRLLDETLDSEPRLTKLAERDRAFTRMLVATTLRRLGQIDAVIARC 74 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + RP+ K V ++ +G QLL+ PPHAA++ TV+ A LIN VLR+ Sbjct: 75 IDRPLPAKAGRVRNMLRLGAAQLLFLDTPPHAAISTTVDLAKNSPLAGFAKLINAVLRRL 134 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHS 184 R+ +AE +A P+W+ + Y P+ + I +A+ P+ + + Sbjct: 135 DREGRAWVAEQDAGPLNT--PAWMWQSWLDTYGPDTARLIAQAHQTEAPVDISVA---GD 189 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 W L+ M +R + V LPGF +G VQD +A + Sbjct: 190 PALWAERLEADIMPT-------GTLRRQAGGDVTQLPGFAEGAWWVQDLAASLPAKLMGA 242 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 G+ + DLCAAPGGK L VA EA+V AVD +R+ R NL+RL + AT+ + D Sbjct: 243 VKGKRVADLCAAPGGKALQ-LAVA-EAEVTAVDRSAKRMVRFRRNLERLKLAATIVETD- 299 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 + W FD +LLDAPC+ATG +RRHPD L+ D+ LA Q +L A + Sbjct: 300 --VAGWQPPAPFDAVLLDAPCTATGTLRRHPDGVHLKGPGDVAYLADQQHALLKAAAAMV 357 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG------KQ----NLPG 414 K GG LVY CS+ P+E QI L+ A E PG KQ LP Sbjct: 358 KPGGILVYCVCSLEPQEGEAQIIRLLESGAPLVRDPIEPSEIPGLDFVLTKQGEIRTLPH 417 Query: 415 --AEEG--DGFFYAKL 426 AE+G D FF A+L Sbjct: 418 YLAEKGGMDAFFIARL 433 >UniRef50_B0MPP7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPP7_9FIRM Length = 439 Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 118/410 (28%), Positives = 199/410 (48%), Gaps = 18/410 (4%) Query: 33 QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-T 91 Q +DKA L +GVL LD+LI + V ++ +G YQLL+ Sbjct: 32 QNDADRRDKAFSAALFYGVLERRMTLDYLIRYYSGIEFDKIKTAVVEILRMGFYQLLFMN 91 Query: 92 RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDAR----YLHPS 147 +P AA+ E+V + KG +N +LR F R ++++ +A+ Y P Sbjct: 92 SVPDSAAVNESVALCDYCNSTKAKGYVNAILRTFLRNEKQIDYGNLTGEAKLSIEYSCPK 151 Query: 148 WLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYP 206 WL+K+ EQ ++ + RPP++ R+N ++ D + L+ G+ ++ Sbjct: 152 WLVKKWNSELGEQRAMQMINSCFGRPPIYARVNTVRYTVDDVIGELESEGISAAKNSLID 211 Query: 207 DAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE 266 + L + ++ G +QD S+Q C AP E ++DLC+APGGKT E Sbjct: 212 ACIELANTKGIEQSSAYKKGMFHIQDISSQICCKIAAPVFNETVVDLCSAPGGKTFTCAE 271 Query: 267 VAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCGE-QQFDRILLDA 323 + + ++ + D+ + ++S + + KRLG+ T + D +++ + + DR++ D Sbjct: 272 IMNDRGRIYSYDLYDGKVSVIANTAKRLGLTIITAAENDA---TKFNPDIPKADRVICDV 328 Query: 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 PCS GVIRR P+IK+ + + + L Q +I++ ++K GGTLVY+TC+V EN Sbjct: 329 PCSGLGVIRRKPEIKY-KPMKQLETLPDTQRKIINNAAEYVKPGGTLVYSTCTVSRTEND 387 Query: 384 LQIKAFLQRTAD-----AELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + FL+ +D L G + + LP GDGFF A L K Sbjct: 388 DIVDEFLKEHSDFVPVVVPLNIKGLEDSYKRTMLPCDVNGDGFFTATLRK 437 >UniRef50_Q14PA1 Putative ribosomal rna small subunit methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PA1_SPICI Length = 423 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 122/417 (29%), Positives = 209/417 (50%), Gaps = 32/417 (7%) Query: 25 LSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVG 84 LSNI+ D+DK L+ + +G L+ L+++ N+ + T ++ + L+ + Sbjct: 25 LSNIVEQ-NDNFIDQDKTLIYRIVYGTLKNKLYLEYIANQFIESKKTNQKLQI--LLWMS 81 Query: 85 LYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASD--- 140 +YQ + RIP +A + E V + ++ P+ G IN L++ ++E+ E N +D Sbjct: 82 IYQFRFLDRIPNYAIVNEAVNISKSVS-PKYAGFINTTLKKIFDSKDEIF-EINIADETK 139 Query: 141 ---ARYLHPSWLLKRLQKAYPEQWQSIVEANNQR-PPMWLRINRTHHSRDSWLALLDEAG 196 +Y PS L L+ Y E V ++ P + R+N SRD L+ Sbjct: 140 KLSIKYSFPSSLYLILRNEYSEDIARQVMIDSLTIPKLSFRVNTLKISRDELLSKYSNYN 199 Query: 197 MKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAA 256 + +V + PV F+ G + +QD + L PQ + +LD+C+A Sbjct: 200 LT----KSLVSSVGVIADKPVVNSEMFKKGLIFIQDEMSMRIAEILDPQETDRVLDMCSA 255 Query: 257 PGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQ 314 PGGK TH+ ++ ++ A DI E++++ + N RLG+ D R + E Sbjct: 256 PGGKATHLSQIINNKGIIDAYDISEKKINLIKMNASRLGITNIYPHLLDAR---KINSEI 312 Query: 315 QFDRILLDAPCSATGVIRRHPDIKW-LRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 373 Q+D+IL DAPCS GVI+R P+IK+ ++++ L ++Q ++L+ + LK GG LVY+ Sbjct: 313 QYDKILCDAPCSGLGVIKRKPEIKYHTLTNQELANLVEIQEQLLEKAYQLLKPGGILVYS 372 Query: 374 TCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEG-DGFFYAKLIKK 429 TC+ EN +QI+ FL + +D ++ T + + G E DGF+Y K+ KK Sbjct: 373 TCTFGGYENIVQIRNFLAKHSDLKIITT--------EQIFGYENNTDGFYYCKIRKK 421 >UniRef50_A6UED5 Fmu (Sun) domain protein n=14 Tax=Rhizobiales RepID=A6UED5_SINMW Length = 470 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 125/383 (32%), Positives = 196/383 (51%), Gaps = 26/383 (6%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPP-----LQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R AA+ + VV++ L +L P + ++++D D+AL++ + LR L ++ I Sbjct: 40 RQAAAKILAAVVDRKTPLDGMLDPERGNPVYRELNDADRALVRAILNSALRHLPRIRAAI 99 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGLINGV 121 + L+ P+ R + +++ V Q+LY +P H+A+ VE A + R + L+N V Sbjct: 100 DSLLQTPLPEGARALEHVLTVAAAQILYLDVPDHSAVDLAVEQAQSDPRNRRFASLVNAV 159 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINR 180 LR+ R++E +L A P W RL Y +Q + I +A Q P + + Sbjct: 160 LRRLSREKEAILERLQQVPA---MPGWFFDRLVTCYGRDQAERISDA--QLVPAAIDVT- 213 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCM 239 SW D P +VRL+ + +LPGF +G VQDA+A Sbjct: 214 VKSDAASWA---DRLNGTVLPTG----SVRLQDFDGSIPSLPGFSEGGWWVQDAAASIPA 266 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 +G ++DLCAAPGGKT + V A+V+A+D RL R+ NL+RLG+++ Sbjct: 267 RLFGDISGRKVVDLCAAPGGKTAQL--VLAGAKVIALDQSSSRLRRLKANLERLGLESAT 324 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 K+ D + + E+ FD LLDAPCS+TG RRHPD+ W + D+ +LA LQ +L Sbjct: 325 KEADM---ADFRPEELFDAALLDAPCSSTGTTRRHPDVLWTKGPDDVEKLAGLQERLLRH 381 Query: 360 IWPHLKTGGTLVYATCSVLPEEN 382 +K GG LV++ CS+ P E Sbjct: 382 ALTLVKPGGLLVFSNCSLDPREG 404 >UniRef50_A6LN58 NusB/RsmB/TIM44 n=2 Tax=Thermosipho RepID=A6LN58_THEM4 Length = 416 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 106/355 (29%), Positives = 188/355 (52%), Gaps = 29/355 (8%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAAL 99 +KA + L FGVLR LDW+IN L+ + ++ ++ +G YQLL+T P ++ + Sbjct: 34 EKAFFKNLIFGVLRKQEYLDWVINSLLKKKDIPP--SIRTILRIGTYQLLFTNKPSYSIV 91 Query: 100 AETVEGAIAIKRPQLKGLINGVLRQFQR----QQEELLAEFNASDARYLHPSWLLKRLQK 155 ETVE +++ KGL+N +LR+ + + +EL +Y HP WL++ +K Sbjct: 92 NETVE---LVEKKSFKGLVNAILRKISKIGYTEPKELYL-------KYSHPKWLIEYWKK 141 Query: 156 AYPEQWQSIVEANNQRP-PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE-T 213 P + + NQ P R+N+ RD L + PH+ P + E Sbjct: 142 FLPLDYIYKILEYNQYPLKTTARVNKRKIDRDK----LKIENIFPTPHS--PVGIYFEKI 195 Query: 214 PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQV 273 L + +G++T Q S+Q + + E + D CAAPGGK THILE+ + + Sbjct: 196 EENPWKLDKYINGYITYQSESSQIIPLLVDFEKDELVFDACAAPGGKATHILELC-DVNL 254 Query: 274 VAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIR 332 V D+++Q++ + + KRL ++ + D + + + +FD+I +DAPCS+ G+ R Sbjct: 255 VINDVEKQKIKILENQFKRLNLRPKKILNFDAQ---KITLKDKFDKIFIDAPCSSLGIAR 311 Query: 333 RHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 R+P++ ++ + +L+++Q I+ +W +LK G ++Y+TC+V EEN+ +K Sbjct: 312 RNPEVLRRQKKENFKKLSEIQINIISNLWKYLKKHGIMIYSTCTVTIEENTNTVK 366 >UniRef50_B0VHI6 Putative 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHI6_9BACT Length = 438 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 135/438 (30%), Positives = 213/438 (48%), Gaps = 22/438 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD--KDKALLQELCFGVLRTLSQLDWLIN 63 N RS A + +V++ + +L +K+ + +D AL L GV++ +LD+++ Sbjct: 2 NFRSEAYTTILKVLKDKEYSDTLLHQRAKKLKNAGEDPALFYNLVKGVIKLYLKLDYILQ 61 Query: 64 KLM-ARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + + + T + L+ +GLYQLLY IP +AA+ ETVE A + PQ+ +N V Sbjct: 62 QYVDKKKYTDTDIKIKVLLYMGLYQLLYLNSIPDYAAVNETVELAKTLFNPQVADFVNAV 121 Query: 122 LRQFQRQQEELLAEFNASDARYLH--PSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRI 178 LR + R E A Y H P L+K+ + E+ + + N+ P + +R+ Sbjct: 122 LRNYLRNPEVSYPNEPALRIAYEHSFPPELIKQWLDLWGEENTEYLAMFFNENPELHIRV 181 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N T + + A + + P P A V F +G+ +VQD SA Sbjct: 182 NSTATTPEKLKAYFAKRNIVITPSQASPMMFHTAQTAEVLEDVAFSEGYFSVQDTSAALI 241 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQR---LSRVYDNLKRLG 294 + L PQ E +LDL AAPGGK ++I E + +V+AVD + L + + L+ Sbjct: 242 VELLDPQKEESVLDLFAAPGGKCSYIAERMDNTGEVIAVDKIPSKMKLLKQAANRLQLTN 301 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 +K V P F R+L+D PCS GV R D++W + ++IPEL +LQ Sbjct: 302 IKMVVTDAFKYGPVA----PAFHRVLVDVPCSGWGVFGRKSDLRW-QAHQNIPELIKLQE 356 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL--CETGTPEQPGK--- 409 + LD + GG LVY+TC++ P+EN QI AFL++ + EL + PE+ Sbjct: 357 KALDYAANFVTPGGFLVYSTCTMNPKENEDQISAFLKKNRNFELIPADAFIPERYTSAGY 416 Query: 410 -QNLPGAEEGDGFFYAKL 426 + +P DG F AKL Sbjct: 417 LKTIPFKHNMDGAFAAKL 434 >UniRef50_A2BK62 tRNA and rRNA cytosine-C5-methylase n=12 Tax=Archaea RepID=A2BK62_HYPBU Length = 472 Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 101/301 (33%), Positives = 164/301 (54%), Gaps = 9/301 (2%) Query: 138 ASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAG 196 A + +YL P+WL++R++ E+ + + EA N+RP + +R+N + + + L G Sbjct: 169 ALEWKYLLPAWLIRRMRSLLGEEESEKLFEALNKRPLISIRVNTLKTTVEEVVEELKREG 228 Query: 197 MKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAA 256 P V+ E P + +G +Q+ ++ L P+ G ++DL AA Sbjct: 229 KNPIVSTRVPVIVKFEGPYDFDRSRLYREGKFVIQEEASAAASIILDPKPGMTVVDLAAA 288 Query: 257 PGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQ 314 PGGKT+HI E+ ++ A DID R+ R+ L+R+G+ + + D R + GE+ Sbjct: 289 PGGKTSHIAELMKNHGRIYAFDIDRVRIKRMRMILRRMGITIVRIFEKDAREAPRILGEE 348 Query: 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 DR+LLDAPC++TG I ++P+++W R+ + E+ +LQ E+L+A +K GG L+Y T Sbjct: 349 IADRVLLDAPCTSTGTIAKNPELRWRVREEGLEEIVKLQREMLEAAAKLVKPGGRLLYTT 408 Query: 375 CSVLPEENSLQIKAFLQRTADAELCETGTPEQPG------KQNLPGAEEGDGFFYAKLIK 428 CS+LPEEN IK FL+R ++ +L P P + P + GFFYA L K Sbjct: 409 CSLLPEENEDNIKWFLKRHSEFKLVPLNGPYDPSPLLHGTMRAWPHRHDTIGFFYALLEK 468 Query: 429 K 429 K Sbjct: 469 K 469 >UniRef50_Q2SSR7 RRNA methyltransferase RsmB (Sun protein), putative n=4 Tax=Mollicutes RepID=Q2SSR7_MYCCT Length = 428 Score = 174 bits (440), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 136/448 (30%), Positives = 221/448 (49%), Gaps = 55/448 (12%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNIL--PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N RS+A +++V ++ SN+L ++ ++ +DK + L GV+ LD+L+ Sbjct: 11 NSRSIAFDILKKVFV-NKAYSNVLLNKISKKNLNQQDKDFVFNLVHGVISNKIHLDYLLA 69 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 KL+ T V ++++ LYQ++Y IP +A + E+V I + IN +L Sbjct: 70 KLIDVKKTSIDLQV--ILLISLYQMIYLNSIPNYAIVNESV-NLIKTTSQKQANFINAIL 126 Query: 123 RQFQRQQEELLAEFNASDAR----YLHP-SW-LLKRLQKAY-PEQWQSIVEANNQRPPMW 175 +F R +++ L E N + LH S+ L L K Y E IV N+Q P ++ Sbjct: 127 NKFLRFKDKYL-EINLDNKDLELCILHSFSYELYLMLIKQYDKEIVNQIVVNNHQIPKLY 185 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPG---------FEDG 226 +R+N + D Y D LE L +++G Sbjct: 186 IRVNTLKITSDQLFN-------------KYKDIYLLEKTNVNDCLIANKTIINSDLYKNG 232 Query: 227 WVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSR 285 ++T+QD ++ L P +LD+C+APGGK TH+ + + +VA +I+E ++ Sbjct: 233 FITIQDKASILVSQILNPSLNTKVLDMCSAPGGKLTHLSMILKNTGNIVANEINESKIKL 292 Query: 286 VYDNLKRLG-MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 + +N+ RL + +V D R Q Q+FD ILLDAPCS GV +R P+IK LR D+ Sbjct: 293 IKENITRLNCLNISVINMDARKIKQ---RQEFDYILLDAPCSGFGVFKRKPEIK-LRFDQ 348 Query: 345 -DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA-ELCETG 402 + + LQ E+L++ + +LK G +VY+TC++ +EN QI FL + D +L E Sbjct: 349 IQVNSIINLQEELLESAYYNLKNNGEMVYSTCTINQDENQNQINKFLNKHKDMIKLYE-- 406 Query: 403 TPEQPGKQNLPGAEEG-DGFFYAKLIKK 429 Q + G EE DGF+ KL K+ Sbjct: 407 -------QQIFGFEENTDGFYICKLKKQ 427 >UniRef50_C1ZLP1 Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLP1_PLALI Length = 754 Score = 174 bits (440), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 135/399 (33%), Positives = 201/399 (50%), Gaps = 47/399 (11%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IP 94 +S D+ L EL G++R S L L+ L+ R M +R + +I +GLYQ+ + IP Sbjct: 334 LSPSDRRLAYELICGIVRRQSTLQALLMSLVHRQMETLERPLQTIIKIGLYQIFLCQGIP 393 Query: 95 PHAALAETVEGAIAIKRPQLK--GLINGVLRQFQRQQEELLAEFNASDA------RY--- 143 HAA+ ETVE A KR L+ G +NGVLR + E + +S A +Y Sbjct: 394 QHAAVHETVELA---KRANLRWGGFVNGVLRSAIQLMTENILTAPSSKALPIGHHQYREL 450 Query: 144 ---LHPSWLLK-----RLQKAYP----EQW--QSIVEAN-------NQRPPMWLRINRTH 182 L PS L ++P E+W Q VEA NQ LR+N Sbjct: 451 TTDLFPSPTLTPGSYIAAAFSFPHDLVERWVGQYGVEATIRMAFWFNQVTETALRVNLLK 510 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R+++ L A D P+ +RL + + LPGF +G +VQD SAQ L Sbjct: 511 TDRETFRQKLFAADFVAE-AGDLPETIRLLSTVRISTLPGFPEGEFSVQDLSAQHAARRL 569 Query: 243 APQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKA---- 297 PQ GE +LDLCAAPG KT H+ E+ + +++A D R+ +VY+N +RLG+ Sbjct: 570 NPQPGEVVLDLCAAPGSKTCHMAELMQNQGEIIAADTHGGRIRQVYENAERLGLSIIRTI 629 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 T+ PS +FD++L D PCS TGV+ + P+ +W + EL ++Q+ IL Sbjct: 630 TIGPRGENLPSM-----EFDKVLADVPCSNTGVLGKRPEARWKYSPAHLDELREMQATIL 684 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA 396 ++ GG ++Y+TCS+ P EN ++ FL T++A Sbjct: 685 RTAAGKVRIGGRILYSTCSIEPLENEEIVQQFLAATSEA 723 >UniRef50_C3RII4 SUN protein n=10 Tax=Bacteria RepID=C3RII4_9MOLU Length = 417 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 126/408 (30%), Positives = 204/408 (50%), Gaps = 40/408 (9%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDW-LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRI 93 +S DK L + +G ++ L++ L + + + +++ + +++ LYQL++ ++ Sbjct: 33 LSRNDKDLATRIVYGTIQNKLYLEYQLAPYIQGKKIKNREKMI---LLMSLYQLIFLDKV 89 Query: 94 PPHAALAETVEGAIAIKRPQLKG-LINGVLRQFQRQQEELLAEFNASD------ARYLHP 146 P +A + E V +A KR G +N +LR F R + E + D HP Sbjct: 90 PDYAVIDEAVR--LAKKRDNFAGKFVNAILRNFLRNGK---CEIDEKDELKRISIETSHP 144 Query: 147 SWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADY 205 W++K L K Y + I + +N P R+N ++ L DE G Sbjct: 145 LWIVKMLSKQYDLNIAKKICQHDNTPPTRAARVNILKTTKAQLLT--DENFEVGNLS--- 199 Query: 206 PDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL 265 PD + L + F++G VT+QD S+Q L PQ + +LD+C APG KTTH+ Sbjct: 200 PDGL-LYRAGNIANTDYFKNGLVTIQDESSQLIAPLLDPQPTDLVLDMCCAPGSKTTHLA 258 Query: 266 EVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDA 323 + + +++A D+ E ++ V NLKRLG+ + GD + E+ FD+ILLDA Sbjct: 259 AIMNNQGKIIAYDLFEHKIKLVEANLKRLGVNNVELHVGDATLLKEKYSEESFDKILLDA 318 Query: 324 PCSATGVIRRHPDIKWLRR---DRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE 380 PCS GV++R P+IK+ D IP LQ+++LD + LK G +VY+TC++ + Sbjct: 319 PCSGLGVMKRKPEIKYHDSGAMDTIIP----LQAKLLDNAYYLLKKNGKMVYSTCTINKK 374 Query: 381 ENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 EN IK FL + D ++ E K+ LP + DGF+ KL K Sbjct: 375 ENEQMIKQFLDKYPDMKIIEE-------KKILPYVYDSDGFYMCKLEK 415 >UniRef50_B2UP28 Sun protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UP28_AKKM8 Length = 412 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 136/397 (34%), Positives = 201/397 (50%), Gaps = 38/397 (9%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAAL 99 D+ L+Q L F VLR + LD +I L + + R + + +GL QL + HAA+ Sbjct: 43 DRHLVQALVFSVLRNQTWLDHVIGTLRKGRLDVEARLI---LQLGLSQLFLLGMADHAAV 99 Query: 100 AETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNAS--DARYLHPSWLLKR-LQKA 156 ETV A +L+GL+N +LR R+++ +L E Y P+WL++R ++ Sbjct: 100 YETVNLASV----RLRGLVNAILRNALRREKTILEEREKLPLSIHYSTPAWLVRRWTEQM 155 Query: 157 YPEQWQSIVEANNQRPPMWLRINRTHHSRD--SWLALLDEAGMKGFPHADYPDAVRLETP 214 P+ + ++ NN P +++R N ++ + LA LD A P +E Sbjct: 156 GPQMARDLLRWNNTTPRLYVRANPLMPMKNIPASLAPLDRA----------PGWFSVEGL 205 Query: 215 APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQV 273 P+ + + G + V D S + + LAPQ GE ILD CAAPGGK+ I+ +A + Sbjct: 206 LPLEEI---KTGSLYVADPSTRYSIDLLAPQPGEEILDACAAPGGKSAAIIAATGGKAHL 262 Query: 274 VAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYP--SQWCGEQQFDRILLDAPCSATGV 330 A D+ E RL + +NL R G Q D P ++W G +FD +LLD PCS TGV Sbjct: 263 TATDLHEHRLPTLKENLDRQGSSFVRTAQADWSLPCRTEWKG--RFDAVLLDVPCSNTGV 320 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 I+R D++W +I L LQ IL+ +K GG LVY+TCS+ EE+ L I+ FL Sbjct: 321 IQRRVDVRWRLTPEEIRRLTALQKTILENASRAVKPGGRLVYSTCSIDAEEDGLLIRDFL 380 Query: 391 QRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLI 427 Q + L E K LP E+ DG + A LI Sbjct: 381 QNHPEWTLKEE-------KLILPHEEKSDGAYAALLI 410 >UniRef50_B1C5S4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S4_9FIRM Length = 450 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 119/411 (28%), Positives = 203/411 (49%), Gaps = 27/411 (6%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAA 98 D+ L + GV++ +++L+++++ L P+ V + +GLYQ++Y +IP +A Sbjct: 44 DRRLCTNIVHGVIKKINKLEYVLSTLSNTPVNELDERVKISLYIGLYQIIYLNKIPEYAI 103 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASD------ARYLHPSWLLKR 152 + ++V + G +NG+LR R++ EL E SD Y L ++ Sbjct: 104 VNDSVNLVKMFVGKKASGFVNGILRNALRKKHEL-KEIEFSDFFDIMYYEYGFKRALSEK 162 Query: 153 LQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD--YPDAV 209 L +Y E+ + + P + LR+N+ +R+ E KGF D P+ + Sbjct: 163 LLLSYSKEELIEYAKYSILPPNVTLRVNKLKTNREELKNRFKE---KGFEVRDTFVPEGI 219 Query: 210 RLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP 269 + + V L ++ G ++QD + L + +LD+CAAPGGK+ H E+ Sbjct: 220 EVLSHLNVTLLEEYKKGLFSIQDCAGMVVAHSLDVKEDMKVLDMCAAPGGKSMHTSELMN 279 Query: 270 EA-QVVAVDIDEQRLSRVYDNLKRLGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSA 327 + +V+ DI ++L + +K+LG+ + K+ DG ++ C FDRI+ D PCS Sbjct: 280 NSGDIVSCDIYTKKLEIMNFRMKQLGINNIMTKKLDGTIFNE-CYMNTFDRIICDVPCSG 338 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 GVIRR P+I + I EL ++Q +IL+ +LK GG L+Y+TC++ EEN + Sbjct: 339 LGVIRRKPEILIYYSNEKIEELKKVQRQILENGIRYLKKGGVLIYSTCTINKEENEDIVY 398 Query: 388 AFLQRTADAELCETGTP---------EQPGKQNLPGAEEG-DGFFYAKLIK 428 + L+ D +L E P + G N+ G + D FF AKL K Sbjct: 399 SILKEHEDIKLNEINLPFEFDYDKAKAKEGILNISGDKNNIDSFFIAKLTK 449 >UniRef50_C7RGU2 Fmu (Sun) domain protein n=4 Tax=Anaerococcus RepID=C7RGU2_ANAPD Length = 430 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 119/397 (29%), Positives = 205/397 (51%), Gaps = 23/397 (5%) Query: 46 ELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEG 105 ++ +GVL +D++I KL + + V ++ +G+Y + + +A + + VE Sbjct: 40 KVIYGVLENKIYIDYMIGKLSKIKLKKIHKNVLTILEIGIYNIHFLETKDYATVDKLVE- 98 Query: 106 AIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAYPE 159 K + G +N +LR F R ++E+ A+ SD RY P + + + Y Sbjct: 99 LTKRKNRRSSGFVNAILRNFIRDEKEI-AKIKISDDIKSLSVRYSMPEEITRYIFDNYGM 157 Query: 160 QW-QSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH 218 + + + +N + +RINR +D+ + L G + +A+ ++ P+ + Sbjct: 158 DYTKDFLRYSNNEAVLSIRINRLKTDKDNLIKKLKAKGFEIEVSKISENALLVKNPSGLV 217 Query: 219 ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEA-QVVAVD 277 A F++G T+Q ++ + L PQ ILDLCAAPG KT+++ E + +++A D Sbjct: 218 ATSEFKEGLFTIQQEASMKTVEVLDPQKDSKILDLCAAPGTKTSYLAEYTRNSGKIIAND 277 Query: 278 IDEQRLSRVYDNLKRLGMKAT-VKQGDGR-YPSQWCGEQQFDRILLDAPCSATGVIRRHP 335 I + +L+ + +N++RLG+ + D Y S + E++FD +L+DAPCS GV+ R P Sbjct: 278 ISKNKLNLIRENIERLGLSNIELDSFDASVYRSDF--EEKFDYVLVDAPCSGLGVMARKP 335 Query: 336 DIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD 395 +I++ R DI LA+LQ +IL +LK G LVY+TC++ EN L FL+ AD Sbjct: 336 EIRYNRTISDIKVLAELQRKILANAIRYLKPAGILVYSTCTLGNIEN-LDNYNFLK--AD 392 Query: 396 AELCETGTPEQPGKQNLPGA---EEGDGFFYAKLIKK 429 L + E GK+ L ++ DGFF +K KK Sbjct: 393 ERLT---SLEIDGKKYLEFVSFLDKTDGFFISKFKKK 426 >UniRef50_A8ST69 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8ST69_9FIRM Length = 452 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 119/429 (27%), Positives = 208/429 (48%), Gaps = 24/429 (5%) Query: 19 VEQGQSLSNILPPL----QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQ 74 +E+ + SN Q +S +D+A + + GV +LD+++N+ + + Sbjct: 16 IEKNHTFSNTALGTALRANQFMSKQDRAYITRMVEGVTEKRMRLDYIVNQFSKTKINKCK 75 Query: 75 RTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELL 133 + ++ +G Y++ Y + H A V+ A L+G +NGVLR R ++ ++ Sbjct: 76 PLIRCVLRMGTYEIFYMDSVQDHTACNLCVKLAADHGFGSLRGFVNGVLRNIARNKDSIV 135 Query: 134 AEFNASDAR------YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRD 186 D R Y P LL+ L++ Y E I+ + + P +R+N S Sbjct: 136 FPDQEKDKRAYYSVMYSVPEELLEILERDYDYETIDRILASGDSDRPTAIRVNTEKISVT 195 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 ++ L + G+ + ++ + + +PGF DG VQD S+ + Sbjct: 196 AFSEKLRQNGITVERGSMNDTSLLISGYDYIRKVPGFFDGEFVVQDQSSCLAVKAAGINE 255 Query: 247 GEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDG 304 G+ ++D+CAAPGGKT + + E V++ D+ +++ + +N++RLG+ TV+ D Sbjct: 256 GDLVVDVCAAPGGKTMYAAMLTGSEGHVISRDLTDKKTELIEENIERLGLSNVTVQVHDA 315 Query: 305 R-YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 R + + G+ D ++ D PCS G++ R DIK+ + ELAQLQ EILD + + Sbjct: 316 REFDEELTGKA--DVVIADLPCSGLGIMGRKNDIKYHVSMESVKELAQLQREILDTVCRY 373 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC--ETGTPEQPGKQNL----PGAEE 417 +K GGTLVY+TC++ EN + + T D LC + PE G++ G +E Sbjct: 374 VKPGGTLVYSTCTIDSIEND-ENAVWFADTHDFSLCGIDDVVPEHGGERGFVTLHQGIDE 432 Query: 418 GDGFFYAKL 426 DGFF +K Sbjct: 433 CDGFFISKF 441 >UniRef50_Q0G330 Putative uncharacterized protein n=5 Tax=Rhizobiales RepID=Q0G330_9RHIZ Length = 473 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 129/398 (32%), Positives = 198/398 (49%), Gaps = 29/398 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQ-----QKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R +AA+ + V+EQ SL + P +++ +D+ L++ + LR L I Sbjct: 46 RQVAAKLLGAVIEQQTSLDGLTDPDHGHPHFRQLEARDQGLVKAILLTALRFRGTLTQEI 105 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGLINGV 121 + RP+ +++L+ V Q+ + +P AA+ V A A R + KG++N V Sbjct: 106 AARLDRPLPSNATALNHLLHVAAAQIRFLDVPDSAAVDLAVTAAEADPRTRRFKGVVNAV 165 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRP-PMWLRINR 180 LR+ R EL ++ P+WLL+RL AY E + A ++ P P+ L + Sbjct: 166 LRRMTR---ELGGAEVTTEPAIDCPNWLLERLIAAYGEPRAKAIAAAHRMPAPIDLTVK- 221 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLE--TPAPVHALPGFEDGWVTVQDASAQGC 238 ++W L + G ++RL+ T + +L GF +G VQDASA Sbjct: 222 --TDPEAWAERLGGQVVSG-------PSIRLDATTQGSIASLDGFAEGKWWVQDASAALP 272 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 + G+ DLCAAPGGKT + V +A V A + + R R+ NL RL A Sbjct: 273 VRLFGDLTGKTAADLCAAPGGKTAQL--VLSDATVTACEASKSRAKRLVANLTRLAHDAE 330 Query: 299 VKQGDGRYPSQ-WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 G P Q G++ FD +LLDAPCS+TG +RRHPD+ + D+ LA++Q ++L Sbjct: 331 TLIG----PFQETLGDRTFDAVLLDAPCSSTGTLRRHPDVGHTKSLDDVRRLAEVQRKLL 386 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD 395 DA H+ GGTLV++ CS+ P E +KAFL D Sbjct: 387 DAAANHVAPGGTLVFSNCSIDPIEGEELVKAFLAERKD 424 >UniRef50_B0PFT6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFT6_9FIRM Length = 450 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 136/438 (31%), Positives = 213/438 (48%), Gaps = 25/438 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWL 61 +++ R AAQA+ ++ G + + L +K + ++ A L + VL +D + Sbjct: 26 KKDARYTAAQALLRMESAGAYSNLTIDSLIEKNGLDAREGAFAAALFYTVLERRLTIDHV 85 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLING 120 + AR + + V + +G+ QL++ + +AA++E+V A+ + G +NG Sbjct: 86 LAAYCARGLASLSKPVLQTLRLGVCQLVWMDGVDDYAAVSESVNLTRALGCAKASGFVNG 145 Query: 121 VLRQFQRQQEELLAEFNASDAR----YLHPSWLLKRLQKAYPEQWQ-SIVEANNQRPPMW 175 VLR F R + +L + R Y P WL++ AY E ++ A+ RPP++ Sbjct: 146 VLRAFLRADKAVLPVKGGTAERLSVEYSCPVWLVEAWLSAYGEAAALRVLRASLGRPPIY 205 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH--ALPGFEDGWVTVQDA 233 LR N S L G+ P A L V +L F +G VQD Sbjct: 206 LRANTLRVSAQQLCERLAAEGVAA--QLAEPPAGCLLARGRVEPESLASFGEGLFHVQDR 263 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKR 292 ++Q C L GE +LD+CAAPGGK+ I E + ++VA D+ ++R V KR Sbjct: 264 ASQLCAAALGALPGERVLDVCAAPGGKSFTIAEHMENSGELVARDLHQKRARMVQCGAKR 323 Query: 293 LGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+ GD G FDR+L D PCS GVIRR P+IK+ + + + L + Sbjct: 324 LGLSIIHASAGDAAVYDASLG--SFDRVLCDVPCSGFGVIRRKPEIKY-KPQKSVEGLPE 380 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQN 411 +Q +IL +LK+GGTLVY+TC++LP EN + +QR D ET +Q Sbjct: 381 IQYKILKTSTHYLKSGGTLVYSTCTLLPAEN----ERVVQRLLD----ETNGAFNIVEQR 432 Query: 412 LPGAEEGDGFFYAKLIKK 429 + E+ DGFF + L K+ Sbjct: 433 VYTGEDTDGFFVSVLKKR 450 >UniRef50_C6XRR6 Fmu (Sun) domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRR6_HIRBI Length = 487 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 118/384 (30%), Positives = 189/384 (49%), Gaps = 23/384 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R AA + ++V +G + L + ++ D+ + + LR ++D + Sbjct: 64 RRAAADILMRIVHEGADMDEALASSKFFDELEGPDRGFARAIASAALRAFGRIDDALETY 123 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIK-RPQLKGLINGVLRQ 124 + RP+ V L+ VG QL + P +AA+ TVE A K + G++N +LR+ Sbjct: 124 LDRPLEKIDPAVLSLLRVGCAQLWVLKAPSYAAVDATVEAARQWKPASRGGGMVNAILRR 183 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 R+ E + + A + P WL +R A E+ + P RI+ T S Sbjct: 184 AGREPEA----YESLPASRIWPDWLSERFSSALGEETTQNIAMMQMLEP---RIDLTVKS 236 Query: 185 R-DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 ++W L+ + +VRL T A + L G+ +G VQD +A Sbjct: 237 DPEAWAQKLEGTALPS-------GSVRLPTGASLTELEGYVEGEWWVQDVAATLPAQLFG 289 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 G I DLCAAPGGKT + + A+V A+D+ EQR+ +V +NL+R G+KA + D Sbjct: 290 DVKGLSIGDLCAAPGGKTMQL--ASKGAKVTAIDLSEQRIEKVRENLERTGLKAKTQVTD 347 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 R+ W + FD +LLDAPCSA G +RRHP+ W R D+ + + LQ +++ A + Sbjct: 348 ARH---WRPAEPFDAVLLDAPCSALGTLRRHPEGAWRRNDKGLDRYSGLQIKLVQAAYDM 404 Query: 364 LKTGGTLVYATCSVLPEENSLQIK 387 +K+GGT++Y C+ LP E +K Sbjct: 405 MKSGGTMLYCVCTPLPAEGIEVVK 428 >UniRef50_B0MGA0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MGA0_9FIRM Length = 448 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 120/412 (29%), Positives = 199/412 (48%), Gaps = 30/412 (7%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHA 97 KD+A LC G L +D++I+ + + V L+ +G Q+L+ IP A Sbjct: 39 KDRAFFTRLCQGTLERRLTIDYVIDLYSKTKVRKMKPLVRSLLRMGACQILFMDHIPDSA 98 Query: 98 ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL-LAEFNASDARYLH-----PSWLLK 151 A E V+ A +L G +NGVLR RQ++E+ + N +YL P W+++ Sbjct: 99 ACNECVKLAKKRGFSKLSGFVNGVLRTISRQKQEIPFPDRNKDFEKYLSVACSMPEWIIR 158 Query: 152 RLQKAYPE-QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVR 210 ++Y E + ++IV + + + + SR+ +A L++ G K P+A+R Sbjct: 159 HFLRSYSEAETETIVSSFLEPKKTTVSWMESSGSREELIASLEKDGAKVEDGKLLPEALR 218 Query: 211 LETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAP 269 + + L F +G VQD S+ P+ G+ ILD+C+APGGK + + + Sbjct: 219 ISHYDFLRRLTSFREGRFIVQDESSMLAGKAADPKEGQKILDMCSAPGGKALYAADKLHG 278 Query: 270 EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSAT 328 QV+A D+ E + + +N++R+G + Q D R P + E D +L D PCS Sbjct: 279 TGQVLARDLTEYKEELLKENIERVGFENIRTQIWDARIPDERLAES-MDVVLCDVPCSGL 337 Query: 329 GVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK- 387 G++ + DIK+ + + +L +LQ EIL ++K GG+L+++TC++ P+EN + Sbjct: 338 GIMGKKQDIKYNLEESALEDLVKLQREILKTALTYVKPGGSLLFSTCTINPKENEENFRW 397 Query: 388 -------------AFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 FL T D + + G Q LPG DGFF KL Sbjct: 398 LAGQTGFEPEDLTPFLPETLDIKTVKEGYI-----QLLPGIHPCDGFFIGKL 444 >UniRef50_C3WQ58 16S rRNA m(5)C 967 methyltransferase n=15 Tax=Fusobacterium RepID=C3WQ58_9FUSO Length = 435 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 126/442 (28%), Positives = 219/442 (49%), Gaps = 31/442 (7%) Query: 6 NLRSMAAQAVEQVVEQGQS---LSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 N++ +A + QV + S L+ L ++ K+KA + E+ +GV+R LD++I Sbjct: 2 NVKQVAINLISQVDKGAYSNIALNETFKTLN--INSKEKAFITEIFYGVIRNKKFLDYII 59 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 K K+ + L+ + +YQ+ + + E E A + ING L Sbjct: 60 EK---NTKEIKKEWIRNLLRISIYQITFMDSDNKGVVWEATELAKKKYGVPISKFINGTL 116 Query: 123 RQFQRQQE-EL--LAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRI 178 R + R ++ EL LA+ + Y P W L+K Y E + + + + P + +R+ Sbjct: 117 RNYLRNKDSELKSLADEKNYEVLYSIPKWFCDMLEKQYGNENLKQAITSLKKIPYLSVRV 176 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N+ ++ + L E ++ D V + F+ G + QDAS+ Sbjct: 177 NKLKYTEKEFEEFLKEKDIQIIKKID---TVYYINSGLIINSEEFKTGKIIAQDASSYLA 233 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGM-- 295 L E +LD+CAAPGGKT + E + +++A+DI + ++ + N+K+LG+ Sbjct: 234 AKNLGVMPNELVLDICAAPGGKTAVLTENMENRGEIIAIDIHQHKIKLIETNMKKLGIDI 293 Query: 296 -KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 KA V D R ++ ++FD+IL+D PCS GVIR+ P+I + + +I ELA+LQ Sbjct: 294 VKAIVM--DARNVNKQG--RKFDKILVDVPCSGYGVIRKKPEILYSKNRENIEELAKLQL 349 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE-------TGTPEQP 407 EIL++ LK GG L+Y+TC++ EEN+ I+ FL+ + ++ + +G ++ Sbjct: 350 EILNSAADILKDGGELIYSTCTITDEENTNNIEKFLKEREEFKVEKLYILENVSGDYDKL 409 Query: 408 GKQNLPGAEE-GDGFFYAKLIK 428 G + EE D F+ KL+K Sbjct: 410 GGFCINYKEEIMDNFYIIKLVK 431 >UniRef50_B3WEW8 RRNA methylase (Putative) n=77 Tax=Bacilli RepID=B3WEW8_LACCB Length = 446 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 138/455 (30%), Positives = 213/455 (46%), Gaps = 43/455 (9%) Query: 5 RNLRSMAAQAVEQVVEQGQ----SLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 N R +A + + +V QG +L +++ K++ +D LL + +GV++ LD+ Sbjct: 4 NNPRLLAVETLSRVTGQGGYSNLTLDHVIN--SHKLTPRDAGLLTNIVYGVIQHQLTLDF 61 Query: 61 LINKLMARPMTGKQRT--VHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 +A + G++ + L+ + +YQL Y ++P A ++ E A + + Sbjct: 62 Y----LAPFIKGRKLDNWIRCLLDIAVYQLQYLDKVPARAVFFDSTEIAKKLGHQGIAKF 117 Query: 118 INGVLRQFQRQQEELLAEFNASDARYLH-----PSWLLKRLQKAYPE-QWQSIVEANNQR 171 + GVLR QR A A + L P WL+++L E + ++I+ N Sbjct: 118 VTGVLRNAQRTGFPDPAAI-ADPVKRLSIESSTPVWLVEKLTAQLGEPKTRAILNVINVP 176 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPG---FEDGWV 228 LR+N T + + LA L FP + AP L G F G Sbjct: 177 AHASLRVNTTKITPAALLASLKPE----FPDLKESPLTPIGLIAPSGHLAGTSAFVKGEY 232 Query: 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI---LEVAPEAQVVAVDIDEQRLSR 285 T+QD S+ L Q G+ +LD CAAPGGKTTHI L+ QV A+D+ ++ Sbjct: 233 TMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHANKVRL 292 Query: 286 VYDNLKRLGMKATVKQG--DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 + N KRLG+ + D R + FD+IL+DAPCS G+IRR P+IK+ + Sbjct: 293 INKNAKRLGLTDRIHAQVLDARKVATTFPANSFDKILVDAPCSGLGLIRRKPEIKYTKTP 352 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT 403 D L Q+Q IL+++ P LK GG L Y+TC+++ EEN + FL A E + Sbjct: 353 EDPAHLQQIQLAILNSVAPTLKIGGRLTYSTCTMVKEENQDVVAQFL--AAHPEFEQVSV 410 Query: 404 P---------EQPGKQNLPGAEEGDGFFYAKLIKK 429 P P Q P + DGFF A LI++ Sbjct: 411 PTLKPLHKAHNAPALQLFPDDYDTDGFFIASLIRR 445 >UniRef50_Q022D6 NusB/RsmB/TIM44 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022D6_SOLUE Length = 360 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 142/424 (33%), Positives = 197/424 (46%), Gaps = 83/424 (19%) Query: 10 MAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM--A 67 +AA + Q+VE G S++L + +D L E+ FGVLR +QLD+LI + Sbjct: 8 IAAFDILQLVESGGYASDLLLARTADLDSRDAGLASEIVFGVLRYRAQLDFLIIHYAGRS 67 Query: 68 RPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 R + + RT + + +YQ+ Y R+PPHAA+ E+VE ++ G +N +LRQ Sbjct: 68 RKLDPEVRTA---LRMAIYQIRYLERVPPHAAVKESVELVKRARKTSAAGFVNAILRQVD 124 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQ-SIVEANNQRPPMWLRINRTHHSR 185 R + A + Y P WLL R ++ Y E I +A + P ++RI Sbjct: 125 RDP----VIWPAREIEYSCPEWLLARWEREYGETAALGIAQAALREPEKYVRIG------ 174 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 AG + QD AQ + L Q Sbjct: 175 --------TAGER-------------------------------TQDIGAQSIVPLLDLQ 195 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 G+ LDLCAAPG KT LE Q VA D+ RL + LK L V DG Sbjct: 196 PGQRFLDLCAAPGNKTAQALEAG--VQAVACDLHFHRLVQ----LKPLTPNLVVV--DGT 247 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 P + +FDRIL+DAPCS TG + R+P+IKW D+ +L QS +L L Sbjct: 248 RPLPFAA--RFDRILVDAPCSGTGTLGRNPEIKWRLTPADLADLHARQSALLANALSLLA 305 Query: 366 TGGTLVYATCSVLPEEN-SLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYA 424 GGTLVY+TCS+ PEEN + ++A ++RT +Q LPG E GDG FYA Sbjct: 306 PGGTLVYSTCSLEPEENEGVAVQARVERT---------------EQRLPGREAGDG-FYA 349 Query: 425 KLIK 428 +IK Sbjct: 350 AVIK 353 >UniRef50_C6QJ47 Sun protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QJ47_9RHIZ Length = 468 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 140/447 (31%), Positives = 216/447 (48%), Gaps = 47/447 (10%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R +A A+ V+ + + ++ + ++ +D+A + + VLR L ++ Sbjct: 40 RDVAVSALFSVLVEKRPFDDVFAKAAAARNLAPRDRAFARLIATTVLRNRGSLQAVLRTY 99 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKG-LINGVLRQ 124 + +P+ + +++ QLL + PPHAA++ V+ A + + G L+N VLR+ Sbjct: 100 LEKPLPEHLGRLEQILLAAAAQLLLIKTPPHAAISLAVDQCRADRVGKRFGNLVNAVLRR 159 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHH 183 LA + + P WL+ R + Y + + I A+ P + + + Sbjct: 160 LSESGSGRLASLD--NVMLTFPDWLMARWSRTYGAAEARQIARASLSEPSLDITVK---S 214 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 D+W + L+ + ++R V L G+ DG VQDA+A + L Sbjct: 215 DADAWASRLNGVALP-------TGSIRCSHVGRVEELDGYNDGAWWVQDAAAALPVKLLG 267 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 +G LDLCAAPGGKT + A A+VVAVD RL+R+ +NL+RLG+ A + D Sbjct: 268 DVSGLSALDLCAAPGGKTAQL--AAGGARVVAVDKSAGRLARLQENLQRLGLSAEISVAD 325 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 + + E FD +LLDAPC+ATG IRRHPDI +L+R D+ LA LQ+++L Sbjct: 326 AQ---SFSSETAFDVVLLDAPCTATGTIRRHPDILYLKRPEDVAALAALQAKLLRQAAGL 382 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQ---------------------RTADAELCETG 402 +K+GGTL+Y TCS+ PEE QI AFL RTAD +L Sbjct: 383 VKSGGTLLYCTCSLEPEEGEEQIAAFLSEHRDFRRRPIALDETVIPLLWRTADGDL--RT 440 Query: 403 TPEQPGKQNLPGAEEG-DGFFYAKLIK 428 P LP G DGF+ A L+K Sbjct: 441 LPSY--FSELPEGFRGLDGFYAAMLVK 465 >UniRef50_A7IDU9 Fmu (Sun) domain protein n=2 Tax=Xanthobacteraceae RepID=A7IDU9_XANP2 Length = 478 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 123/429 (28%), Positives = 205/429 (47%), Gaps = 41/429 (9%) Query: 33 QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQL---- 88 ++++ D+D+ + +L + +LR +++ W + K RP + R + +L + G L Sbjct: 47 RRQIGDRDRGQIYDLLYALLRHHARIVWWLAK-HGRPDVPRNRLLAWLALDGGTALGGKT 105 Query: 89 LYTRIPPHAALAETVEG--AIAIKRP-QLKGLING------VLRQFQRQQEELLAEFNA- 138 + + G K P Q+ GL +G VL +R LL + Sbjct: 106 SGNKTSGNKTSGNKTSGNKTSGSKTPDQIHGLFSGGKFAPAVLTDHERA---LLLKLQGC 162 Query: 139 --------SDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 + R+ PSW ++ L++ + + ++ + A PP+ LR+N +R++ L Sbjct: 163 TIDHPAMPDEVRFECPSWAVEPLRRRFDDTFEREMAALLTPPPLDLRVNPVKSTREAMLR 222 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 L + G+K P P +R++ + +LP + G V +QD +Q + + GE + Sbjct: 223 ALRDLGLKAEPSRLAPFGIRVKERPSLASLPMLKSGEVEIQDEGSQLVAMLVDARPGERV 282 Query: 251 LDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ 309 +D CA GGKT I ++A + V+A D+ + RL R + +R G+ + + Sbjct: 283 VDFCAGAGGKTLAIAAQMANKGHVIACDVSDGRLKRAAERFRRAGLHNIETRPLASETDR 342 Query: 310 WCGEQQ--FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 W + FDR+L+DAPCS TG RR+PD +W +++ + L LQ+ IL + +K G Sbjct: 343 WVKRHKGGFDRVLVDAPCSGTGTWRRNPDARWRQQEAGLDHLLPLQARILASAARLVKPG 402 Query: 368 GTLVYATCSVLPEENSLQIKAFLQ----------RTADAELCETGTPEQPGKQNLPGAEE 417 G LVYATCS+LPEEN Q+ AFL R A +L + P+ P E Sbjct: 403 GRLVYATCSMLPEENEAQVAAFLAAYPAFHVMPVREAAPQLTGSAHPDH--LSLTPARHE 460 Query: 418 GDGFFYAKL 426 DGFF A L Sbjct: 461 TDGFFAAVL 469 >UniRef50_A7C6J3 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Beggiatoa sp. PS RepID=A7C6J3_9GAMM Length = 207 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 85/189 (44%), Positives = 113/189 (59%), Gaps = 4/189 (2%) Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q G +LD CAAPGGK H+LE +VA+D R+S + + L+RL + A V + Sbjct: 2 QEGMRVLDACAAPGGKMAHLLECCKIDTLVALDNQSARVSMLTNTLQRLNLSAKVCCANA 61 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 P W FDRILLD PCS +GVIRRHPDIK+LR+ DI +LA+ Q+ +L +WP L Sbjct: 62 TKPKTWWDGHPFDRILLDVPCSGSGVIRRHPDIKYLRQPSDIAKLAEGQARLLSTLWPLL 121 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----LCETGTPEQPGKQNLPGAEEGDG 420 GG L+Y TCSV EEN+LQI+ FL DA+ + G ++ G+Q LPG DG Sbjct: 122 APGGKLLYITCSVFAEENNLQIQQFLATYVDADEFVLTADWGHAQKYGRQILPGENNLDG 181 Query: 421 FFYAKLIKK 429 F ++K Sbjct: 182 FIMRVFLRK 190 >UniRef50_Q0BRA0 16S rRNA m(5)C 967 methyltransferase n=12 Tax=Acetobacteraceae RepID=Q0BRA0_GRABC Length = 452 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 137/420 (32%), Positives = 196/420 (46%), Gaps = 39/420 (9%) Query: 8 RSMAAQAVEQVVEQGQSLS---NILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R A + + V+EQ +SL N LPP++ + L LR L +D ++ Sbjct: 36 RDAACRLLNAVLEQHRSLEEALNALPPMEPRDRAAAHRLAAA----TLRRLGTIDAVLEP 91 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + R R + + +G LL+ PPHAA+ V+ A ++ GLIN VLR+ Sbjct: 92 FLRREPPAPVRDI---LRLGAAGLLFLDTPPHAAVGTAVDLARQLRLAPFTGLINAVLRK 148 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 +E+L ++ R P WL A+ ++I A+ P+ L + Sbjct: 149 VATGGQEMLNGLDSP--RLDTPGWL----WTAWGRDARAIALAHQTEAPLDLTLRPGITP 202 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 + L + +RL V LPGFE+G VQDA+A LA Sbjct: 203 PAEGILLPN-------------GTIRLPPGTRVSILPGFEEGAFWVQDAAASLPARLLAA 249 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 + GE I+DLCAAPGGKT + A+V+AV+ + R+ R+ +NL RL + V D Sbjct: 250 REGEKIVDLCAAPGGKTAQLAMSG--AEVIAVEREAVRVPRLRENLARLRLDVQVAVADA 307 Query: 305 RYPSQWCGEQQF--DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 ++W F D ILLDAPCSATG IRRHPD+ L+R RDI L Q +L A Sbjct: 308 ---AEWTPPAGFVPDAILLDAPCSATGTIRRHPDVPHLKRQRDITALTAQQDRLLAAALA 364 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFF 422 L+ GG L+YA CS+ PEE +I+ L+ L E LPGA +G+ Sbjct: 365 MLRPGGRLIYAVCSMQPEEGRQRIEHALKTLPSVTLSPFTVEEL---AFLPGARTAEGYL 421 >UniRef50_A9IZD6 SUN-family protein n=5 Tax=Bartonella RepID=A9IZD6_BART1 Length = 454 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 134/456 (29%), Positives = 217/456 (47%), Gaps = 56/456 (12%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 +R + + + VV++ LS + P K+S +D+ L + + LR Q+ Sbjct: 19 VRQVCVRLLGAVVDRYTPLSGLTDNEHGHPQYLKLSQRDRLLCRAILTTSLRHRGQITAA 78 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLK---GLI 118 ++ + RP+ + ++ +L+ + + Q+LY IP HAA+ V +A P+++ G++ Sbjct: 79 LSCFLERPLPSQALSLQHLLHISVAQILYLDIPDHAAIDLAVR--VAKFDPRMRRFSGVV 136 Query: 119 NGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 N +LR R+ L + + P+W + L AY E+ Q I+E + PP+ L Sbjct: 137 NALLRNVAREAAPLRQQVPTIEGV---PAWFSQLLVSAYGIEKAQQIIELQSVEPPLDLT 193 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE-TPAPVHALPGFEDGWVTVQDASAQ 236 + + + + G P+ +VRL V LPG+ +G VQD +A Sbjct: 194 V------KSDSIGWAERLGGVVLPNG----SVRLNRLECSVSDLPGYREGAWWVQDFAAA 243 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L G+ + DLCA+PGGKT + A+V A+++ R+ R+ +N++RL Sbjct: 244 LPACLLGELRGKRVADLCASPGGKTAQL--ALQGAEVTAIELSANRVKRLKENMERLYFS 301 Query: 297 ATVKQGDGR--YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + QGD R +P+Q FD +LLDAPCS+TG IRRHPDI W + D+ +LA LQ Sbjct: 302 VHIWQGDVRNFHPTQL-----FDAVLLDAPCSSTGTIRRHPDILWTKSRDDVIKLAALQY 356 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD--------------AELCE 400 ++L A +K GG +V++ CS+ EE I+ L D A L Sbjct: 357 DLLVAAIALVKKGGRIVFSNCSLAREEGEDLIEKILSIRNDIVLDPIYPEEMGALAHLLS 416 Query: 401 TG----TPEQPGKQNLPGAEEG----DGFFYAKLIK 428 G TP +N + DGFF A+L K Sbjct: 417 EGMVRTTPADFCHKNFDAEKTAPLGMDGFFAARLRK 452 >UniRef50_B3EF03 Sun protein n=11 Tax=Chlorobiaceae RepID=B3EF03_CHLL2 Length = 451 Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 151/470 (32%), Positives = 219/470 (46%), Gaps = 64/470 (13%) Query: 1 MKKQRNLRSMA-AQAVEQVVEQGQSLSNILPPLQQKVS-----DKDKALLQELCFGVLRT 54 M K+ ++ S A V Q +E G+ S L +++S D+AL EL GVLR Sbjct: 1 MTKKESMTSRELALKVLQNIESGEKKSGT--ALHEQLSHTSLNQNDRALATELVNGVLRR 58 Query: 55 LSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQ 113 LD I + + ++ +G YQL+Y RIP AA+ E+V A K Sbjct: 59 RLTLDTFIGRYYHHRYEKAAPVLKNILRIGAYQLIYLDRIPHWAAVNESVSLARRYKGEH 118 Query: 114 LKGLINGVLRQFQRQQEELLAEFNAS---------DARYLHPSWLLKRLQKAY-PEQWQS 163 + L+N VLR E + A+ + S HP WLL+R Y E+ ++ Sbjct: 119 MAKLVNAVLRNIT--PETISADLDPSGKMKEIQRLSITASHPEWLLERWIARYGKERAEA 176 Query: 164 IVEANNQRPPMWLRINRTHHSRDSWLAL-------LDEAGMKGF----PHADYPDAVRLE 212 I+ NN+ P RIN + +LA + ++G++ F + Y A++ Sbjct: 177 ILAYNNRTPLTGFRINPLKTTPQEFLATENSKTARIGKSGLENFFLSTEFSCYESAIK-- 234 Query: 213 TPAPVHALPGFEDGWVTVQDASAQGCMTWLA-PQNGEHILDLCAAPGGKTTHILEVAPE- 270 G +TVQ+ + QG L PQ G +LDLCAAPGGK+T E+ Sbjct: 235 ------------QGLLTVQNPT-QGLACLLCDPQPGSTLLDLCAAPGGKSTFCGELMQNT 281 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKA-TVKQGDGRYPSQWCGEQQFDRILLDAPCSATG 329 + AVD+ Q+L ++ ++ LG+ + + D R + EQ ILLDAPCS TG Sbjct: 282 GNITAVDLYSQKLQKLSEHAGELGITIISTAEADAR---TYLPEQPPAVILLDAPCSGTG 338 Query: 330 VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAF 389 V+ R +++W I ELA LQ E+LD L GTL+YATCS+ P+EN QI+AF Sbjct: 339 VLARRAELRWKLTSETITELALLQVELLDHAASLLAENGTLLYATCSIEPKENEQQIEAF 398 Query: 390 LQRTAD--AELCETGTPEQPGKQ--------NLPGAEEG-DGFFYAKLIK 428 L R + + PE + LPG EG DG F +L K Sbjct: 399 LIRHPEFMRDPASGALPEPFASKAVPNGTLLTLPGEHEGFDGGFAQRLKK 448 >UniRef50_C5X355 Putative uncharacterized protein Sb02g027560 n=1 Tax=Sorghum bicolor RepID=C5X355_SORBI Length = 574 Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 127/427 (29%), Positives = 213/427 (49%), Gaps = 44/427 (10%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRT--VHYLIMVGLYQLLYTRI 93 + D+D L+ + G +R LD+LI L + ++ + ++ +G +++L + Sbjct: 155 LDDRDIRLVTVIVAGTVRWKRYLDYLIMSLCSEEKVFREMEPLLLQILRIGFFEILKLDV 214 Query: 94 PPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE-----------ELLAEFNASDAR 142 P +AA+ E V+ A RP ++N +LR+ +E + A+ A Sbjct: 215 PAYAAVDENVKLAKVALRPGAGNMVNAILRKLVLLKETDSLPLPKIEGDDRAQARALSII 274 Query: 143 YLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLD------- 193 Y HP W+++R + + ++ ++ NN P LR+N + ++R + L+ Sbjct: 275 YSHPVWMVRRWIRFHGKDEALRLMNWNNSDPHFSLRVNTSKGYTRADLVKRLESLQVHYE 334 Query: 194 EAGMKGFPHADYPDAVRLETPAPVHALPGF-EDGWVTVQDASAQGCMTWLAPQNGEHILD 252 E+ M GF VR++ G +DG VQD SA ++ + PQ GE I+D Sbjct: 335 ESVMDGF--------VRIQEGMQAVLQAGLLKDGICAVQDESAGLVVSVVDPQPGETIVD 386 Query: 253 LCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK--QGDGRYPSQ 309 CAAPGGKT + ++ E ++ A+DI++ RL + D K G+ + D R ++ Sbjct: 387 CCAAPGGKTLFMASRLSGEGKIQALDINKGRLRILMDAAKLHGLDDIITDIHADLRLYAK 446 Query: 310 WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGT 369 ++D++LLDAPCS GV+ + D++W R+ D+ EL LQ E+LD+ ++ GG Sbjct: 447 ET-TAKYDKVLLDAPCSGLGVLSKRADLRWNRQFEDLEELICLQDELLDSASMLVRPGGI 505 Query: 370 LVYATCSVLPEENSLQIKAFLQR---TADAELC-----ETGTPEQPGKQNLPGAEEGDGF 421 L+Y+TCS+ PEEN +I AF+QR A +C E T E N P DG Sbjct: 506 LIYSTCSIDPEENEKRIAAFVQRHPEFAPQSVCGYVPTEFITDEGFYSSN-PTKHSMDGA 564 Query: 422 FYAKLIK 428 F A+L++ Sbjct: 565 FAARLVR 571 >UniRef50_C7GZX3 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZX3_9FIRM Length = 461 Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 124/458 (27%), Positives = 222/458 (48%), Gaps = 71/458 (15%) Query: 19 VEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVH 78 +E+G+ + + +S ++ A ++EL FG L+ +LD +N L + K + Sbjct: 21 IEKGKYSNVAFEESTKGLSAREAAFVRELVFGTLKLNIKLDHAMNHLKDKKARIKLKD-R 79 Query: 79 YLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLK-GLINGVLRQFQRQQEEL---- 132 L+ +GLYQL Y +P +AA+ ET+ AIA K + K GLIN +LR + R+++E+ Sbjct: 80 ILLRLGLYQLDYMDSVPDYAAVNETI--AIAKKLVKNKVGLINAILRGYIRKRQEIEDSI 137 Query: 133 --LAEFNASDARYLHPSWLLKRL-------------------QKAYPEQ----------- 160 L+ +Y +P W ++ + QKA ++ Sbjct: 138 NDLSYIERLSVKYSYPLWFVREITNDEANNSCNKKLPANLSVQKAINDRDTADQVPEYGA 197 Query: 161 WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHAL 220 +S+++ N++ P+ +R N + + + ++E G++ P A+ ++ + + Sbjct: 198 EESVLQCGNEKAPLCIRTNLKKITGEELVEKINELGIEALP-GRAEGAINVK-GSGIFDT 255 Query: 221 PGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDE 280 ++ G+ +VQD S+Q + L ++ + +LDLC GGKT I+E +V+++D E Sbjct: 256 ELYKKGYFSVQDESSQLAIEALDIKDCK-VLDLCCGRGGKTFAIIEQCKNVEVISMDKYE 314 Query: 281 QRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDR----------ILLDAPCSATGV 330 ++ ++ D KRLG K + D E D+ ++LD PC+ +G Sbjct: 315 HKILQLKDEAKRLGHKVNIGVND------LFDENNLDKHCRLYDTIKYVILDVPCTGSGT 368 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 +RR P+IK+ D + +L +LQ +LD + LVY TCS+ +EN I AFL Sbjct: 369 VRRRPEIKYAGEDTKLADLVKLQRTLLDRGAELMNDEDHLVYMTCSIFQKENMDNIDAFL 428 Query: 391 QRTADAELCETG--TPEQPGKQNLPGAEEGDGFFYAKL 426 +R ++ +L + TPE+ G DGFF+A L Sbjct: 429 KRHSEFKLLQYRQYTPEKDGT---------DGFFFADL 457 >UniRef50_UPI0001BC34B4 sun protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC34B4 Length = 443 Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 120/451 (26%), Positives = 214/451 (47%), Gaps = 30/451 (6%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M + N R++ A+ ++ E+ + +LP + +K + + D++ + G + Sbjct: 1 MNQNVNTRNIILDALIEINEKDRFTHIVLPEVLKKYQYLDNIDRSFISRTILGTVERKIT 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKG 116 LD++IN P+ + + ++ + YQL+Y + A E V ++ LKG Sbjct: 61 LDYIINLFSKTPVNKMKPVIRNILRMSTYQLIYMEGVKDFAVCNEAVRLSVKKGFTALKG 120 Query: 117 LINGVLRQFQRQQE--ELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPP 173 +NGVLR R++ E+ E +Y P W++ + K Y E ++I++A + P Sbjct: 121 FVNGVLRTIAREKNKIEMPQELWL---KYSTPGWIVDKWLKEYGKENTEAILKAQYSKRP 177 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD-AVRLETPAPVHALPGFEDGWVTVQD 232 + +R N H +R+ + L ++ + PD A+ +E ++ L F +G VQD Sbjct: 178 LTVRCNFNHCTREELVKRLTAENVRA-KVIEEPDCALEIEGFDYLNKLNTFANGDFFVQD 236 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLK 291 S+ + P+ +++DLCAAPGGK+ HI E V A D+ + ++ + +N+ Sbjct: 237 LSSMMVCYAINPEKDSYVIDLCAAPGGKSLHIAEFMDNTGFVEARDVSDNKVMMINENID 296 Query: 292 RLGM---KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 RL + KA VK ++ ++ D ++ D PCS G++ + PDIK+ + E Sbjct: 297 RLNLCNIKAVVKDATVKWEDSV---EKADVVIADLPCSGLGILNKKPDIKYHASEEKCHE 353 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC--ETGTPEQ 406 L++LQ +ILD ++K GG ++TC++ EEN ++ L D L E P+ Sbjct: 354 LSELQKKILDNSKEYVKHGGKFCFSTCTLNYEENMGNVEHILS-YGDYVLVDFEDRVPDN 412 Query: 407 PGKQNLPGAEE--------GDGFFYAKLIKK 429 K G E DGFF A +K Sbjct: 413 MKKYYKKGILEIIPDENNNFDGFFIALFRRK 443 >UniRef50_A9KM96 Sun protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM96_CLOPH Length = 453 Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 124/423 (29%), Positives = 206/423 (48%), Gaps = 31/423 (7%) Query: 34 QKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-R 92 + +S +D+A + LC GVL +LD+ + + + + + ++ + YQ+ + + Sbjct: 33 KDLSKQDRAFISRLCLGVLEQKLRLDYDLERFSKIKVKKMKPVIRNVLRIAAYQIEFMEQ 92 Query: 93 IPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL-------LAEFNASDARYLH 145 IP AA E V+ L G +NG+LR R+ ++ L E +Y Sbjct: 93 IPDSAACDEAVKLVKKRGLGGLSGFVNGILRNLSREFQKANGFDISKLNEIERLSYQYSM 152 Query: 146 PSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD 204 P L++ K++ EQ + +++A + +RIN + + D + L + G++ A Sbjct: 153 PKELVEFWLKSFRREQVEEMLQAFLEPKDTSIRINESKITIDELVDNLVKDGVEVRDGAY 212 Query: 205 YPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTH- 263 +A R+ + + L F+ G+ VQD S+ + G++I+D+CAAPGGKT H Sbjct: 213 LTNAKRITSYNSLPVLDSFQKGYFQVQDESSMMVGLIAGIKAGDYIIDVCAAPGGKTLHA 272 Query: 264 --ILEVA----PEAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCGEQQF 316 +L VA V A D +++++ + NL+R+G + +VK D P E+ Sbjct: 273 ADLLLVAGGEKNPGHVDARDKTDRKVALIEQNLERIGYQNVSVKVFDALVPDDSVKEKA- 331 Query: 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 D IL D PCS GVI + PDIK+ + ELA+LQ IL + +LK GG L+++TC+ Sbjct: 332 DIILADLPCSGLGVIGKKPDIKYNMTKEMMSELAKLQRNILTVVVSYLKPGGVLIFSTCT 391 Query: 377 VLPEENSLQIKAFLQ------RTADAEL-----CETGTPEQPGKQNLPGAEEGDGFFYAK 425 + PEEN I+ + + D L CET +Q Q LP DGFF ++ Sbjct: 392 INPEENEDNIRFITETLKLQPESIDTYLPENLQCETS--KQGYLQLLPNKSGVDGFFISR 449 Query: 426 LIK 428 K Sbjct: 450 FRK 452 >UniRef50_Q8TGZ8 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGZ8_METKA Length = 449 Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 120/400 (30%), Positives = 208/400 (52%), Gaps = 28/400 (7%) Query: 9 SMAAQAVEQVVE-QGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 ++AA+++ +V+ + + +L + DK +++ + + + VLR L+ ++ + Sbjct: 10 ALAAKSLIEVMRTKSYPIQYVLRKTLSEYDDKTQSVTRSMVYDVLRRYGTLERVVEDVSR 69 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGA--IAIKRPQLKGLINGVLRQF 125 + +R L+MV ++LY P A + + ++ G++ L ++ Sbjct: 70 SELPPLERA---LVMVAANEVLYEGKHPAPVTDSATRAAKELGLNHRRVHGVVAD-LEEY 125 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMW-LRINRTHH 183 +R + E E + Y HP W +++ E + + ++E +N+ P + R+N T Sbjct: 126 ERPEPE--DEIDRLCLEYHHPRWFVEKFGALLDEDELKELMEVHNEPPEYYTFRVNTTAA 183 Query: 184 SRDSWLALLDEAG--MKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 + L +E G ++ + DY V+ P + L + +G + QD +A Sbjct: 184 DVEDVLREFEEHGFEVERGEYVDYCIRVKKGQPLRLEELECWREGHIVPQDEAAALVTEI 243 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSR--------VYDNLKR 292 L PQ GE I DLCAAPGGKTTHI ++ EA+++AVD+ RL R V++N++ Sbjct: 244 LNPQPGERIADLCAAPGGKTTHIAQLTEDEAEILAVDVSRVRLRRLERFAERMVFENIEV 303 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 L +A V++ GR P ++ G +FDR+LLD PCS+ G +R PD+KW RDI ELA Sbjct: 304 L--RADVRRL-GRNP-RYVG--KFDRVLLDPPCSSLGTLRSDPDVKWKIGPRDIRELALK 357 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 Q +++ A LK GG LVY+TC++ PEEN L + ++R Sbjct: 358 QRQLIRAAARLLKPGGVLVYSTCTITPEENELVVSEAIKR 397 >UniRef50_C0EY63 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY63_9FIRM Length = 466 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 126/447 (28%), Positives = 213/447 (47%), Gaps = 23/447 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNIL--PPLQQKVSDK--DKALLQELCFGVLRTLS 56 M+K+ ++R+ A + + E+ + LS+I L + +K D+A LC GV Sbjct: 16 MEKRTDMRAEALDTLIDI-ERNKKLSHIAIGETLMRNQFEKKADRAFYTRLCEGVTERKI 74 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKG 116 LD++++ PM + + L+ +G YQ+L+ + AA +E V A +L G Sbjct: 75 YLDYILDHYSKTPMKKCKPLIRSLLRMGAYQILFMDVRDAAACSEAVSLAKKRGFGRLSG 134 Query: 117 LINGVLRQFQRQQEELLAEFNASDARYLH-----PSWLLKRLQKAY-PEQWQSIVEANNQ 170 +NGVLR R++E L D +Y+ P WL K + + Y E + I + + Sbjct: 135 FVNGVLRTLVREKENLPVPDKKDDVKYVSIIYSVPEWLSKLIIEQYGKESAEKIFASFLE 194 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P+ +R N + + + L+EAG+K P A + + + F G V Sbjct: 195 ARPLTIRTNLSKTTPEELEKELEEAGVKVEKGNYLPYAFTISNLNYLGKIAAFRQGKFAV 254 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDN 289 QD S+Q + G+ +LD+CAAPGGKT H + + +V++ D+ E + + +N Sbjct: 255 QDESSQLAVAIADINEGDFVLDVCAAPGGKTFHAADRLKGAGKVLSRDLTEYKTELIEEN 314 Query: 290 LKRLGMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 R+ + V+Q D + E D +L D PCS G++ R DIK+ + + E Sbjct: 315 KDRMHYENVEVQQWDALEEDESLLES-VDVLLADLPCSGLGIMGRKNDIKYQMTEEQLGE 373 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT-----ADAELCETGT 403 LA LQ +IL +W ++K GG ++++TC++ EN+ IK + T + E Sbjct: 374 LAALQRQILSVVWKYVKPGGQMIFSTCTLNKGENAENIKWIEENTPLHLVSIEEYLPQNL 433 Query: 404 PEQPGKQN----LPGAEEGDGFFYAKL 426 + G Q +PG + DGFF +K Sbjct: 434 KNRTGSQGYLQLIPGEDTCDGFFISKF 460 >UniRef50_D1AKD9 Fmu (Sun) domain protein n=4 Tax=Fusobacteriaceae RepID=D1AKD9_SEBTE Length = 437 Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 109/404 (26%), Positives = 195/404 (48%), Gaps = 22/404 (5%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAA 98 K+K+ + + L+ L +D+LI K K+R + L+ + + Q L + ++ Sbjct: 38 KEKSFITNIIHTTLKNLIFIDYLIEK---NASNIKKRKIKQLLRISVAQFLLNKESDYSG 94 Query: 99 LA-ETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEF---NASDARYLHPSWLLKRLQ 154 + E VE A I + Q G +N +LR ++ ++L++E +P W++ ++ Sbjct: 95 IVFEAVETAKIINKHQ-TGFVNVILRNIFQKYDQLVSEIPPTKKYSVELSYPQWIINKIA 153 Query: 155 KAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP 214 YPE + I+++ + + RIN SR+ ++ L AG + V + Sbjct: 154 SDYPENYVRILQSYKTKSYLSFRINPRKFSREDFIKL---AGKHESKILFEIENVFYMSN 210 Query: 215 APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV 274 + + F++ +VQDAS+ + L Q+ + +LD C+APGGK + IL+ VV Sbjct: 211 SALLDTKEFKENCFSVQDASSYLAVKALDVQDDDIVLDACSAPGGKMSAILQEYNPDLVV 270 Query: 275 AVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRR 333 A DI E ++ + + K+ + D R + ++FD+ILLD PCS GV+R+ Sbjct: 271 ASDIHEHKIGMLKEIKKKNNFTNLKIVLNDAREIGEL--NEKFDKILLDVPCSGLGVLRK 328 Query: 334 HPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 P+ + + DI +L ++Q I D+ + LK G ++Y+TC+ EEN+ IK F ++ Sbjct: 329 KPEKIYTLENSDIKKLKKIQKAIFDSAYHSLKENGVIIYSTCTFTREENTNNIKYFTEKY 388 Query: 394 ADAELCETGTPEQP--GKQNLPGA------EEGDGFFYAKLIKK 429 D + P+ K G+ + DGF+ AK KK Sbjct: 389 PDLVIENVIFPDNVFISKDEFGGSFIDYRNKYLDGFYIAKFRKK 432 >UniRef50_Q8TGY3 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGY3_METKA Length = 450 Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 159/294 (54%), Gaps = 13/294 (4%) Query: 143 YLHPSWLLKRLQKAY--PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGF 200 Y HP WL++R + + P++ +++EANN+RPP+ +R+N + L Sbjct: 152 YYHPRWLIERWMEMFGDPDEVVALLEANNRRPPLTIRVNTLKVDPEELAERLQRKYRVTV 211 Query: 201 PHADYPDAVRLETPA--PVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPG 258 + D + L+ P P+ +P +E+G +QD +A L P+ GE ++DLCAAPG Sbjct: 212 EPGRFLDEI-LKIPEGLPIGEMPEWEEGLFVIQDEAAALASAVLNPKPGEVVVDLCAAPG 270 Query: 259 GKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG--DGRYPSQWCGEQQ 315 GKTTH+ ++ E ++VA+D+DE R+ R+ + +R+G+ ++ DGR + G + Sbjct: 271 GKTTHMAQLMGGEGKIVAIDVDEVRMERLREIAERMGVLDCIETHLMDGREAPEKLGREF 330 Query: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 D +L+D PCSA G I ++P+ +W ++ L + Q E+L A +K GG L+Y+TC Sbjct: 331 ADAVLVDPPCSADGTIPKNPERRWRITPDELERLPKFQYELLKAGAEMVKPGGRLLYSTC 390 Query: 376 SVLPEENSLQIKAFLQRTADAELCETGTPEQ-----PGKQNLPGAEEGDGFFYA 424 S+ PEE+ ++ FL + EL E +Q + P E GFF A Sbjct: 391 SMFPEEDEEVVRRFLDEHPEFELLEVKVGDQGFDMPEACRLFPHRHETCGFFIA 444 >UniRef50_Q03W17 tRNA and rRNA cytosine-C5-methylase n=11 Tax=Lactobacillales RepID=Q03W17_LEUMM Length = 448 Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 134/451 (29%), Positives = 223/451 (49%), Gaps = 40/451 (8%) Query: 6 NLRSMAAQAVEQVVEQGQS---LSNILPPLQQKVSDKDKALLQELCFGVLR-TLSQLDWL 61 N R +A Q + ++ S L+ ++ Q K+ + D LL L +GV++ L+ WL Sbjct: 10 NPRVLAVQTLAKIKNGAYSNLQLNQVIK--QHKLGEADTRLLTTLVYGVIQHRLTFEYWL 67 Query: 62 INKLMARPMTGKQRT---VHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 P G ++ V L+ ++Q+ Y +IP HA E++E A + Sbjct: 68 ------EPFVGSKKIDPWVRELLYTAIFQMEYLDKIPQHAIFNESIEVAKILGHVGTGKF 121 Query: 118 INGVLRQFQRQQEELLAEFNASDARYLH-----PSWLLKRLQKAY-PEQWQSIVEANNQR 171 + +L R+ +A+ D + L P WL++ L K E+ + I+ N Sbjct: 122 VTAILHNISRKGLRSVADI-GDDIQRLSIEASLPVWLVEELIKQNGDERARQIIATINDA 180 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P +R+N T + D + E+ + L + V + + DGW+T+Q Sbjct: 181 PKQSIRVN-TLLATDQEVVTALESENFTITASSVAAHAFLVSGGHVASSKAYHDGWLTLQ 239 Query: 232 DASAQGCMT--WLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYD 288 D SA + L P+ + ILD AAPGGKTT + + AP+A + A+D+ E ++ + + Sbjct: 240 DESAMLPVESLHLTPE-VKSILDAAAAPGGKTTQLAQYSAPDAVITALDVHEHKIKLINN 298 Query: 289 NLKRLGM--KATVKQGDGR-YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 N +RL + K + D R P Q +++FDRIL+DAPCS G++RR P+I++ + D Sbjct: 299 NAERLHVADKIHARVLDARKVPEQI--DKKFDRILVDAPCSGFGLLRRKPEIRYDKTLED 356 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE 405 + LA+LQ++ILD++ +L G +VY+TC++L +EN + FL+ + EL T T Sbjct: 357 VESLARLQTQILDSVSQNLAKNGIMVYSTCTILRQENDDVVTNFLEDHPNFELIPTETTY 416 Query: 406 Q----PGKQNL---PGAEEGDGFFYAKLIKK 429 + G++ L P DGFF A L K Sbjct: 417 KLKLDHGEKALHVYPDDYHTDGFFVATLRKN 447 >UniRef50_B9GFY0 Predicted protein n=6 Tax=Spermatophyta RepID=B9GFY0_POPTR Length = 527 Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 124/425 (29%), Positives = 206/425 (48%), Gaps = 35/425 (8%) Query: 34 QKVSDKDKALLQELCFGVLRTLSQLDWLINKLM--ARPMTGKQRTVHYLIMVGLYQLLYT 91 + + D+D L+ ++ G +R LD+LI L + + + ++ +G Y+++ Sbjct: 106 KDLDDRDLRLVTDIVGGTIRWRRYLDYLIGSLCHDEKAFRSMEPLLLQILRIGFYEIVKL 165 Query: 92 RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE-----------ELLAEFNASD 140 +P +A + E V A RP ++NG+LR+ +E + A+ A Sbjct: 166 DMPSYAVVDENVRLAKVSLRPGAGNMVNGILRKLVLLKESNSLPLPKLEGDDRAQARALA 225 Query: 141 ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKG 199 Y HP W+++R K E+ ++ NN P LR N + L + + M Sbjct: 226 TLYSHPVWMVRRWTKLLGQEKAIKLMMWNNDNPSFSLRANSGKGVTRADLVM--QFNMLK 283 Query: 200 FPHA---DYPDAVRLETPAPVHALPGF-EDGWVTVQDASAQGCMTWLAPQNGEHILDLCA 255 PH VR++T + G + G VQD SA ++ + PQ G+ I+D CA Sbjct: 284 VPHELSLHLDHFVRVKTGLQIVIQAGLLKQGLCAVQDESAGLIVSVVNPQPGDSIIDCCA 343 Query: 256 APGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRL----GMKATVKQGDGRYPSQW 310 APGGKT ++ ++ + + A+DI++ RL R+ +L G+ T+ + + Sbjct: 344 APGGKTLYMASQMHGQGMLYAIDINKGRL-RIVKETAKLHQVDGVITTIPSDLRTFAESY 402 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 + + D++LLDAPCS GV+ + D++W RR D+ EL +LQ E+LDA +K GG L Sbjct: 403 --QLKSDKVLLDAPCSGLGVLSKRADLRWNRRLEDLEELKKLQEELLDAASILVKPGGVL 460 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAELCETGT---PEQPGKQNL----PGAEEGDGFFY 423 VY+TCS+ PEEN ++ AFL R + + P+ K+ P DG F Sbjct: 461 VYSTCSIDPEENEERVDAFLLRHPEFRIDPVDRYVPPDFVTKRGFYSSDPVKHSMDGAFA 520 Query: 424 AKLIK 428 A+LI+ Sbjct: 521 ARLIR 525 >UniRef50_C9L6W4 Ribosomal RNA small subunit methyltransferase B n=12 Tax=Clostridiales RepID=C9L6W4_RUMHA Length = 454 Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 123/452 (27%), Positives = 216/452 (47%), Gaps = 26/452 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M + NLR + + ++ ++GQ ++ +K + +++A L +C G L + Sbjct: 1 MVNKVNLRELVLGILLEINKEGQHSHLVIRSTLEKYQYLEKQERAFLTRVCEGTLEYKLR 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKG 116 LD+++++ + P+ + + ++ +YQLLY +P A E V+ A L G Sbjct: 61 LDYILDQYSSVPVEKMKPVIREILRSSVYQLLYMDNVPDSAVCDEAVKLARKKGFYNLTG 120 Query: 117 LINGVLRQFQRQQEELLAEFNASD-------ARYLHPSWLLKRLQKAYP-EQWQSIVEAN 168 +NGVLR+ R+ + F D Y P WL+++ Y E+ + ++EA Sbjct: 121 FVNGVLRKVAREYGSI--HFPEKDQPVEYLSVLYSMPKWLVEKFLGEYGFEKTEKMLEAF 178 Query: 169 NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWV 228 P +RI + + + L L + P +A ++ + AL F G + Sbjct: 179 LTEKPTTIRIRQHLVDKGAVLDSLKRQKVTVEPAPYVENAYYIKDYDYLPALEAFRMGNI 238 Query: 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVY 287 VQD S+ P+ G++++DLCAAPGGKT I + + ++ A DI + + Sbjct: 239 QVQDVSSMLVGEVADPKEGDYVIDLCAAPGGKTLCIADKLKGTGRIDARDISRTKTDLIR 298 Query: 288 DN-LKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 +N +++ + V + D E+ D ++ D PCS GVI + DIK+ I Sbjct: 299 ENAIRQNFLNVVVTEKDATQLDSESFEKA-DILIADVPCSGLGVIGKKTDIKYNITQNGI 357 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR------TADAELCE 400 EL LQ +IL+ ++K GGTL+Y+TC++ EEN ++ F++ + D LCE Sbjct: 358 AELVNLQRKILEQASTYVKPGGTLIYSTCTINKEENIENVRWFVENYPYELESIDDYLCE 417 Query: 401 ---TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + T ++ Q L G + DGFF A+L +K Sbjct: 418 ELRSDTTKEGYLQLLSGVHDCDGFFIARLKRK 449 >UniRef50_D0GJC1 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GJC1_9FUSO Length = 442 Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 106/388 (27%), Positives = 185/388 (47%), Gaps = 19/388 (4%) Query: 53 RTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP 112 + L +D+L+ K + ++R + L+ + + QL +T L E VE A I Sbjct: 61 KNLIYIDYLLEKTVKNI---QKRKIKQLLRISVAQLFFTEADNAGVLYEAVEVAKIINNH 117 Query: 113 QLKGLINGVLRQFQRQQEELLAEF---NASDARYLHPSWLLKRLQKAYPEQWQSIVEANN 169 Q G +N L+ R ++E++ Y +P W + +++ YPE + I+++ Sbjct: 118 Q-SGFVNATLQSVLRNKDEIIENIPKDRKDGILYSYPQWFVNKMKVDYPEDYIDIMKSYK 176 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 R + +R N ++D + +L E AD V + + + +++G + Sbjct: 177 SRSYLSVRYNSKKLTKDRFEKILSEVKSGILFSAD---EVYYLSNSNIFDTEEYKNGNII 233 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN 289 +QDAS+ + L + G+ +LD CAAPGGK+ IL+ +VA DI E ++ ++ +N Sbjct: 234 IQDASSYLAVKNLNVEKGDVVLDACAAPGGKSLAILQNFEPELLVAEDIHEHKI-KILEN 292 Query: 290 LKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 +K+ + +K +FD+ILLD PCS GV+R+ P+ + I L Sbjct: 293 MKKKYNFSNLKVVLNDATQIESLNMKFDKILLDVPCSGLGVLRKKPEKIYDLTGEQIKSL 352 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG- 408 +LQ +I D+ + LK G ++Y+TC+ EN+ ++ FL++ D + E PE Sbjct: 353 KKLQKKIFDSAYNSLKENGIILYSTCTFSINENTNNLEYFLEKYRDLVIEEVVIPENVDI 412 Query: 409 -KQNLPGAE------EGDGFFYAKLIKK 429 K G DGF+ AKL KK Sbjct: 413 RKDQWGGVYITHKNIYNDGFYIAKLRKK 440 >UniRef50_Q651X9 Os09g0477900 protein n=3 Tax=Magnoliophyta RepID=Q651X9_ORYSJ Length = 570 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 119/419 (28%), Positives = 209/419 (49%), Gaps = 28/419 (6%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRT--VHYLIMVGLYQLLYTRI 93 + ++D L+ + G +R LD+LI L + ++ + ++ +G +++L + Sbjct: 151 LDNRDIRLVTVIVAGTVRWKRYLDYLIMSLCSEEKVFREMEPLLLQILRIGFFEILKLNV 210 Query: 94 PPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE-----------ELLAEFNASDAR 142 P +AA+ E V A RP L+N +LR+ +E + A+ A Sbjct: 211 PAYAAVDENVRLAKVALRPGAGNLVNAILRKLLLLKEANSLPLPKIEGDDRAQARALSII 270 Query: 143 YLHPSWLLKR-LQKAYPEQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGMKGF 200 Y HP W+++R ++ E+ +++ NN P +R+N + ++R + L+ + + Sbjct: 271 YSHPVWMVRRWIRFLGKEEALKLMKWNNSDPHFSIRVNTANGYTRADLIDRLESLQVH-Y 329 Query: 201 PHADYPDAVRLETPAPVHALPGF-EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGG 259 + + VR++ G ++G VQD SA ++ + PQ GE I+D CAAPGG Sbjct: 330 EKSTMDEFVRIQEGMQTVLQAGLLKEGMCAVQDESAGLVVSVVDPQPGETIIDCCAAPGG 389 Query: 260 KTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK--QGDGRYPSQWCGEQQF 316 KT + ++ + ++ A+DI++ RL + + K + A + D R ++ F Sbjct: 390 KTLFMAARLSGQGKIWALDINKGRLRILMEAAKLHNLDAMISDIHADLRLYAKET-TATF 448 Query: 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 D++LLDAPCS GV+ + D++W R+ D+ EL LQ E+LD+ +K GG LVY+TCS Sbjct: 449 DKVLLDAPCSGLGVLSKRADLRWNRQFEDLEELMCLQDELLDSASMLVKPGGILVYSTCS 508 Query: 377 VLPEENSLQIKAFLQRTADAELCETG-------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 + PEEN +I AF+QR D L ++ + P DG F A+L++ Sbjct: 509 IDPEENEHRIAAFVQRHPDFVLQSVHGYVPAEFVTDEGFYSSSPTKHSIDGAFAARLVR 567 >UniRef50_A5KNU7 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5KNU7_9FIRM Length = 456 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 124/458 (27%), Positives = 218/458 (47%), Gaps = 33/458 (7%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQ 57 M K N R + A + +V E G+ +L + Q + +++A + + G L +++ Sbjct: 1 MAKAINEREIVAAILMEVTENGRYSHIVLREVLTKYQYLEKRERAFITRVTEGTLEHMTE 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKG 116 +D++++ + + + ++ +YQ+ Y IP HA +E+V+ A+ L+G Sbjct: 61 IDYILDCFSKVKVKKMKPLIRAILRSAVYQIKYMDSIPDHAVCSESVKLAVKKGFSGLRG 120 Query: 117 LINGVLRQFQRQQEELLAEFNAS-----DARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +NGVLR + +E+ E+ + RY P W+++ ++ Y +++++ Sbjct: 121 YVNGVLRSVVKGIDEV--EYPSDPIKRLSVRYSCPEWIIRLWKETYDLSLIETMLKDFQT 178 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P +R R+ + + L+E + H DA+ + + +L F +G V Sbjct: 179 EKPTTIRRCRSRITMEQLKKRLEEEHVLVENHPYLKDALLISKYDYLESLETFREGLFVV 238 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQ------VVAVDIDEQRL 283 QD S+ Q G ++DLCAAPGGK + E + E Q V A D+ E ++ Sbjct: 239 QDISSMLVGELAHVQAGAQVIDLCAAPGGKALDVAERILMEGQAGCSGHVEARDLTEYKV 298 Query: 284 SRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR 341 S + +N++R+G+ V Q Y + G+ D ++ D PCS GV+ + D+K+ Sbjct: 299 SLIEENIERMGLCNVTAVCQDASVYDEKSAGKA--DIVIADLPCSGLGVLGKKTDLKYKA 356 Query: 342 RDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR----TAD-- 395 I L +LQ +IL ++K GG L+Y+TC+V P+EN + FL+ AD Sbjct: 357 SPEGIVSLVKLQRKILSCAASYVKPGGELLYSTCTVNPKENIENVHWFLKEFPEFYADDI 416 Query: 396 -AELC---ETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 +LC E Q LPG + DGFF A+L KK Sbjct: 417 REDLCLELRESVTENGCIQLLPGVHKSDGFFIARLRKK 454 >UniRef50_Q1IIS1 Sun protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIS1_ACIBL Length = 432 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 125/414 (30%), Positives = 195/414 (47%), Gaps = 38/414 (9%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIP 94 +S D+ L EL G LR S LD L+ ++P+ V + + YQL + RIP Sbjct: 36 LSAPDRGLATELVMGTLRWQSTLDALVATQSSQPLRKLDIEVLIALRLAAYQLQFLDRIP 95 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQ 154 +AA+ E+VE ++ N VLR+ + E+ + HP+WL+ R + Sbjct: 96 ANAAVNESVELVKRARKRSAVPFANAVLRKISKLPREIHGDLA-------HPAWLVARWR 148 Query: 155 KAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET 213 Y + +SI + P LR+ R A L E G++ P +A R Sbjct: 149 DNYGGDAAESISKYGQTTPETALRLPFDAEKRAKVEAELQENGVELAP-GRLLNAARRLV 207 Query: 214 PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQV 273 + F+ G V +QD ++Q + L +G+ ILD CAAPGGKT+ + E P +++ Sbjct: 208 SGDLSGTAAFQRGDVWIQDEASQ--LVALLTGHGDRILDCCAAPGGKTSVLAERNPSSKI 265 Query: 274 VAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRR 333 VA+++ EQR + + ++ V+ D + + E FD +L D PCS TG + R Sbjct: 266 VALELHEQRARLLRERVR--ASNVDVQTADA---TNFRAETAFDCVLADVPCSGTGTLAR 320 Query: 334 HPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 +P+IKW + D+ +L Q Q IL A L GG LVY+TCS+ PEE ++A L T Sbjct: 321 NPEIKWRLKPEDLADLQQRQIAILRAALSQLAPGGRLVYSTCSLEPEEGEAVVEASL--T 378 Query: 394 ADAELCETGTPE------------------QPGKQNLPGAEEGDGFFYAKLIKK 429 + EL + PE P + +PG +GFF A + ++ Sbjct: 379 DEFEL-QPAAPELEQFAPAFAIPDPQTLVRGPYLRTIPGIHPCEGFFAAVITRR 431 >UniRef50_D0LLT9 Sun protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLT9_HALO1 Length = 501 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 137/459 (29%), Positives = 203/459 (44%), Gaps = 38/459 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +R +A + + QV ++G + L + +D+AL+ ELC+G LR +LD + Sbjct: 44 VRDVAHRVLRQVAKEGAFATLALGAALKSSGLDARDRALVTELCYGSLRQQMRLDRALAA 103 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L R + ++ V Y++L+ R+P HA++ V A + + G NGVLR Sbjct: 104 LTPRGLGKLDAATLSILRVAAYEILFLERVPAHASVNSAVRAARRLGGQRFAGFANGVLR 163 Query: 124 QFQRQQEELLAEFNASDAR----YLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRI 178 R+ E L + A + P W+L L + P + V A NQ P+ LR Sbjct: 164 TLAREGEPALPPESEPRAHLAIAWSTPGWILDALSEMVPAAELSEAVAAFNQPAPLTLRA 223 Query: 179 N--RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 + + AL + G P A P A+ E F +G VQD AQ Sbjct: 224 HGVSVEALAERLRALHPQGGFSLSPLA--PQALLAEGLGDPELSQAFAEGQFAVQDLGAQ 281 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGM 295 LAP G +LD CA GGK+ H+ V PE +V A D +L + RLG Sbjct: 282 LAAHLLAPAAGARVLDACAGVGGKSAHLAALVGPEGRVDAADRSAGKLRLCAEGAARLGA 341 Query: 296 KAT------VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 + D +Q + +D +LLDAPCS GV+RRHP+ K + D+ E+ Sbjct: 342 DNVHTAALDLASDDAVAWAQAGLAEAYDAVLLDAPCSGMGVLRRHPEAKLRLQPGDVGEM 401 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG- 408 A LQ+ +LDA+ ++ GG LVY+ C+ E QI AFL R + L +P + G Sbjct: 402 AALQARLLDAVSARVRPGGVLVYSVCTFTRAEGPAQIAAFLDRRDEFALEAPPSPAESGV 461 Query: 409 -------KQNLPGAEEG-----------DGFFYAKLIKK 429 GA G DGFF A+L ++ Sbjct: 462 DWAAAGLTSEAAGAGAGTIRTWPHRHGADGFFLARLRRR 500 >UniRef50_B6W6K6 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W6K6_9FIRM Length = 426 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 110/419 (26%), Positives = 210/419 (50%), Gaps = 17/419 (4%) Query: 17 QVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRT 76 ++ + + ++I+ + ++VSD + + + +GVL L+++I KL + + Sbjct: 13 RICYKNEKSTDIINDIAREVSDI--SYITKNIYGVLENKLYLEYIIGKLSKIKIKKLDKK 70 Query: 77 VHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEF 136 V ++ +G+Y + + +A + E V + K +N VLR + R +E L ++ Sbjct: 71 VLLILEIGIYNIHFLDRKNYAIVNELVNLTKKVSYKS-KSFVNAVLRSYIRDEENL-SKI 128 Query: 137 NASDA------RYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINRTHHSRDSWL 189 A + +Y P W++K L ++Y + + + + N++ + +R+N ++ Sbjct: 129 KAKNKDQFQSIKYSIPLWIIKYLNESYGYDYTEKFLNSLNKKRKLSIRVNENKIYKNKLK 188 Query: 190 ALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEH 249 LL++ G + ++ ++ P+ + F+ G T+Q ++ L+P+ Sbjct: 189 NLLEDKGYQLAESKISSRSLIVKNPSSLADTEEFKKGLFTIQSEASIKVCEVLSPEKNSQ 248 Query: 250 ILDLCAAPGGKTTHILEVAPEA-QVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYP 307 ILDLCAAPG KT+ + E+ + ++VA DI +LS++ +N+KRLG+K + D Sbjct: 249 ILDLCAAPGTKTSFLAELCENSSRIVANDISFNKLSKINENIKRLGLKNIEITNFDASIV 308 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 E+ FD IL D PCS GV+ R P+I++ R D+ L++LQ ILD + +LK G Sbjct: 309 KDEYKEK-FDYILCDLPCSGLGVMDRKPEIRYNRTMEDVINLSKLQKNILDRAFLYLKKG 367 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 G +V++TC++ EN ++ + + G E+ + N +E DGFF K Sbjct: 368 GIMVFSTCTIGNIENKDNFTYLSKKKSLKNIKING--EEYLEYN-TFEDETDGFFLTKF 423 >UniRef50_B6IQ69 tRNA and rRNA cytosine-C5-methylase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IQ69_RHOCS Length = 456 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 100/296 (33%), Positives = 148/296 (50%), Gaps = 13/296 (4%) Query: 146 PSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADY 205 P W L+ A+ +++ + + A P+ LR N +R+ A L EAG+ P Sbjct: 136 PEWAEAPLRAAFGDRFHAEMAAMLGEAPLDLRANPLKAAREQVQAALAEAGVTAAPTGLS 195 Query: 206 PDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL 265 P +R++ APV ALP F +G +QD +Q P+ G ++D CA GGKT I Sbjct: 196 PLGLRVQGRAPVSALPAFREGLFEIQDEGSQLVALLADPRPGMQVVDFCAGAGGKTLAIA 255 Query: 266 EVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ--FDRILLD 322 + + +VVA D+ E RL+R + +R G+ + W + FDR+++D Sbjct: 256 AMMDNKGRVVASDVLEGRLTRAKERFRRAGLHNIETRALSSERDPWVKRHKGKFDRVVVD 315 Query: 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 APCS TG RR+PD +W + EL LQ+ ILD+ ++ GG LVYATCS+LPEEN Sbjct: 316 APCSGTGTWRRNPDSRWRPLGPGLAELLPLQAAILDSAARLVRPGGRLVYATCSLLPEEN 375 Query: 383 SLQIKAFLQRTADAELCETGT--PEQPGKQNL--------PGAEEGDGFFYAKLIK 428 Q++AFL L PE G + P + DGFF A +++ Sbjct: 376 ERQVEAFLANHPAFRLLPVAEAWPENLGAAPVTGDTLRLTPARHDTDGFFAAVMVR 431 >UniRef50_D0WMY6 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMY6_9ACTO Length = 534 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 129/428 (30%), Positives = 210/428 (49%), Gaps = 34/428 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ---QKVSDKDKALLQELCFGVLRTLSQL 58 +++ N + A V + V++ + +N++ P++ ++ D A LC+G LR + Sbjct: 63 RQEANAARLVAFEVLRAVDEDDAYANLVLPVEIARAGLNKLDAAYATNLCYGTLRMRGRW 122 Query: 59 DWLINKLM-ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGL 117 D +I++ R + V L+ +G QLL PPHAA+ ETV A G Sbjct: 123 DAIISRCAKGRRIYDIDPPVLDLLRMGCEQLLAMETPPHAAIHETVVIARNFFGQGTGGF 182 Query: 118 INGVLRQFQR---QQEELLAEFNASDARYL-----HPSWLLKRLQKAYP------EQWQS 163 +N VLR+ Q E++ AS +L HP W+++ L+++ + +S Sbjct: 183 VNAVLRRISEKAGQWPEIVRSSTASRTEFLSLWHSHPRWIVEALEESLEASGRSRDDVES 242 Query: 164 IVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGF 223 ++ A+N P + + S ++ ++ A M+ FP P+AV L P H L Sbjct: 243 VLAAHNA--PAKVALVARAISPEALAERVEAAKMEAFPGYLMPNAVLLGRGDP-HRLHPV 299 Query: 224 EDGWVTVQDASAQ--GCMTWLAPQNG--EHILDLCAAPGGKTTHILEVAPE--AQVVAVD 277 DG VQD +Q + AP G E LD+CA PGGKT + +A A++ A + Sbjct: 300 RDGLAGVQDEGSQLIAALFAAAPIEGKDELWLDMCAGPGGKTATLAAIAQGRGARIHANE 359 Query: 278 IDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ---FDRILLDAPCSATGVIRRH 334 E RL V +++ ++ GDGR G Q+ +DR+L+DAPCS G +RR Sbjct: 360 PQEHRLDLVAASVEPWEDTVALRLGDGRE----LGTQEPDAYDRVLVDAPCSGLGALRRR 415 Query: 335 PDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 P+ +W + +DIP LA+LQ ++L + + L+ GG LVY+TCS E ++ FL Sbjct: 416 PEARWRKDPKDIPGLAKLQRQLLASAFKALRPGGALVYSTCSPALAETRDVVRDFLAAHG 475 Query: 395 DAELCETG 402 A+L + G Sbjct: 476 RAKLLDAG 483 >UniRef50_Q0BWV2 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BWV2_HYPNA Length = 423 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 138/440 (31%), Positives = 204/440 (46%), Gaps = 42/440 (9%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +R A + + V+++ ++L + L + D+A + + LR L +D ++ Sbjct: 6 IRLAAGRLLNLVLDKKRTLDDALATDDAYNNLDGSDRAFARAIASSALRHLGWIDRGVSP 65 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 ++RP++ + LI G Q+ + +P HAA++ETVE A + P G G L Sbjct: 66 FLSRPLSATGAEIRALIRAGAAQIWFMDVPHHAAVSETVEAA-RLWSPARSG--GGFLNA 122 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHH 183 R+ E + L P WL RL AY E +++ + + P + H Sbjct: 123 ALRRVTESESPAATISPLALWPDWLASRLGSAYGREAAEALALSQLEEPSL-------HL 175 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 S A + EA PD V LPG+ G VQDA+A+ L+ Sbjct: 176 SPKGDGARVAEATGGTL----LPDGAIDIVSGAVETLPGYAAGDWWVQDAAARIPAQLLS 231 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 PQ GE ILDLCAAPGGKT + A A V A+D RL R+ +NL R G+ A V D Sbjct: 232 PQTGERILDLCAAPGGKTLQL--AAAGADVTALDRSRPRLERLKENLARTGLHAEVIIAD 289 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 G W F +ILLDAPCSA G +RRHP+ W++ + D+ +Q+ +L A Sbjct: 290 GE---AWAPPALFPKILLDAPCSALGTLRRHPESAWIKTEDDVARFPGVQARLLAAAAGM 346 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP----EQPGKQ--------- 410 L GGTLVY C+ +P E ++A + + T +P E PG + Sbjct: 347 LAPGGTLVYCVCTPVPAEGVDIVEAAIGKG-----ILTRSPVKAEEIPGFEAALTPAGDV 401 Query: 411 -NLPG-AEEGDGFFYAKLIK 428 LPG + D F+ A+LIK Sbjct: 402 LTLPGTGGKHDAFYIARLIK 421 >UniRef50_A8RCQ7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCQ7_9FIRM Length = 415 Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 213/433 (49%), Gaps = 35/433 (8%) Query: 6 NLRSMAAQAVEQV-VEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRT--LSQLDWLI 62 N R+ A ++++ +++G S + +L Q V KDKAL+ ++ +G L+ L + W Sbjct: 2 NARAYAFALLKEICIDEGYS-NLLLRNKLQSVDPKDKALVTQIVYGTLQNYRLVRYQW-- 58 Query: 63 NKLMARPMTGKQ--RTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 + K+ + V L+ + +YQLLY ++P +A + E V P+ L+N Sbjct: 59 -----QSYVKKEPCKEVALLLDMSVYQLLYMDKMPAYAVIDEAVRITKKNIHPRFSALVN 113 Query: 120 GVLRQFQRQQEELLAEFNASDARYL---HPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 VLRQ +R + L E NA + L HP+WL+ + Y ++ + I ++ + Sbjct: 114 AVLRQVERNGKREL-EGNAIEQLALETSHPTWLVAMWKAQYGWQECEKICHSDLEIRKQC 172 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R+N S + LA + HA Y + +H+ ++ G V++QD ++ Sbjct: 173 VRVNTMKASVEELLASGEFVKGNLAEHALYYLGNDI-----IHS-NYYKQGLVSIQDEAS 226 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 Q ++ PQ E ILD+C+APG K HI E + + +V DI R+ + + +RL Sbjct: 227 QLVAQYVDPQPQERILDVCSAPGTKACHIAERMGDKGSIVCGDIHAHRVELIKNGARRLQ 286 Query: 295 MKATVKQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 +++ Q D + GE FDR+L D PCS GV+ R DIK+ + D+ L LQ Sbjct: 287 LQSIQAQVMDATSLKEIEGEM-FDRVLCDVPCSGYGVLARKSDIKYHAKSTDMDTLIPLQ 345 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLP 413 +IL + H+ G LVY+TC++ +EN Q+ AFL + + E + T P Sbjct: 346 QQILQSASKHVVKDGILVYSTCTLNKKENEKQVAAFLAQHEEFECLQQQTI-------FP 398 Query: 414 GAEEGDGFFYAKL 426 DGF+ AKL Sbjct: 399 YTHHSDGFYIAKL 411 >UniRef50_Q9LK54 Similarity to SUN and FMU proteins n=3 Tax=Embryophyta RepID=Q9LK54_ARATH Length = 531 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 120/377 (31%), Positives = 188/377 (49%), Gaps = 38/377 (10%) Query: 44 LQELCFGVLRTLSQLDWLINKLM--ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAE 101 + ++ G +R LD LI L R + + ++ +G+Y+++ +PP+A + E Sbjct: 120 VTDVVGGTIRWRRYLDHLIGSLCHNERTFRNMEPLLLQILRIGVYEIIKRDMPPYAVVDE 179 Query: 102 TVEGAIAIKRPQLKGLINGVLRQFQRQQEEL---LAEFNASD---ARYL-----HPSWLL 150 V A RP +NG+LR+ +E+ L + D AR L HP W++ Sbjct: 180 NVRLAKVALRPGAGDFVNGILRKLVSLKEKDALPLPKVEGDDRAQARALATLHSHPVWMV 239 Query: 151 KRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLA-LLDEAGMKGFPHA---DY 205 +R K ++ ++ NN P LR N RD A L++ PH Sbjct: 240 RRWVKYLGLDEATKLMIWNNNDPGFSLRANT---GRDITRADLVERLNSLKVPHELSLHL 296 Query: 206 PDAVRLETPAPVHALPGF-EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI 264 + VR++T G ++G +VQD SA ++ + PQ GE I+D CAAPGGKT + Sbjct: 297 EEFVRIKTGLQTVVQAGLLKEGICSVQDESAGLIVSVVKPQPGERIMDACAAPGGKTLFM 356 Query: 265 LE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS--------QWCGEQQ 315 + + + A+D++E RL + LG A Q DG + E Q Sbjct: 357 ASCLKGQGMIYAMDVNEGRL-------RILGETAKSHQVDGLITTIHSDLRVFAETNEVQ 409 Query: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 +D++LLDAPCS GV+ + D++W R+ D+ EL +LQ E+LD+ +K GG LVY+TC Sbjct: 410 YDKVLLDAPCSGLGVLSKRADLRWNRKLEDMLELTKLQDELLDSASKLVKHGGVLVYSTC 469 Query: 376 SVLPEENSLQIKAFLQR 392 S+ PEEN +++AFL R Sbjct: 470 SIDPEENEGRVEAFLLR 486 >UniRef50_B5YF43 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Dictyoglomus RepID=B5YF43_DICT6 Length = 430 Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 119/405 (29%), Positives = 200/405 (49%), Gaps = 29/405 (7%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARP-MTGKQRTVHYLIMVGLYQLLYTRIP 94 +S K+K + EL +GV R + LD++ ++ + R ++ R + L+ +Y L T +P Sbjct: 34 LSLKEKHFITELVYGVTRWKTTLDYIWSRFVKRDNLSLFGRILLRLVAYHIYFLKDTILP 93 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQ 154 A+ E VE A K P+ LIN V R+ +++ L RY P ++ Sbjct: 94 --IAVNEIVEIA-KRKVPKEAKLINAVSRRMVKERNNLDLNLIPFHIRYAIPEFIF---- 146 Query: 155 KAYPEQWQSIVEAN---------NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADY 205 E+WQ + N+ + +R+N S + L E G+K Sbjct: 147 ----EEWQDYIGKGEAVKILGWLNKAHNIAIRVNTLKISVEDLKEKLKERGIKFKDGNLV 202 Query: 206 PDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL 265 A+ +E F +G+ +Q ++ L P+ G ++DLC+APG K+TH+ Sbjct: 203 TQALLIEDGFDFEKSDLFHNGYFVIQSEASMLPALILNPEPGSRVIDLCSAPGLKSTHLA 262 Query: 266 EVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKA--TVKQGDGRYPSQWCGEQQFDRILLD 322 E+ + ++V+VDI++ R+ V +N KRLG+ T+ + P G FDR+LLD Sbjct: 263 ELMNNKGKIVSVDINKNRVKLVEENAKRLGISIIETLAEDVLNLPDSLNG--TFDRVLLD 320 Query: 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 APCS GVI P+IKW + DI +L+++Q ++L+ LK GG +VY+TC++ EN Sbjct: 321 APCSGLGVISHKPEIKWRLKREDIYKLSEMQIKMLERAGKLLKKGGRMVYSTCTITWHEN 380 Query: 383 SLQIKAFLQRTADAELCETGTPEQ--PG-KQNLPGAEEGDGFFYA 424 + FL+R + +L + + PG + +P + DGFF + Sbjct: 381 ENVVLYFLERNPEFKLIDFFYKGEKFPGIMRVIPYKYKTDGFFIS 425 >UniRef50_A8YVW1 rRNA methylase n=27 Tax=Lactobacillus RepID=A8YVW1_LACH4 Length = 454 Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 132/446 (29%), Positives = 220/446 (49%), Gaps = 28/446 (6%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQ 57 + ++ R+++ + + +V++ G S SNI K SD D+ L + +G ++ Sbjct: 13 LSTNKSARAISLETLIKVLQNG-SYSNISLNNSLKHSDLSIADQNLATRIVYGTIQYRLF 71 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKG 116 L++ + L+ +T ++ + L+++ LYQ+++ ++P A L E + A + G Sbjct: 72 LEYQLTGLLKTKIT--EKYLKPLLLMSLYQIIFLDKVPNRAVLDEANKLAKQFGKHHSSG 129 Query: 117 --LINGVLRQFQRQQEELLAEFNASDARYLH-----PSWLLKRLQKAYPEQ-WQSIVEAN 168 ++NG+LR F R+ L E + +YL P WL+K L + Q QS++ + Sbjct: 130 YRVVNGILRAFIRRGVILPDEKDT--IKYLSIKESVPEWLVKYLIDNWGMQKAQSVLSSI 187 Query: 169 NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWV 228 N +RI+ + L E + + DAV + + FE G + Sbjct: 188 NDPAKNSVRISSLADRNKVFDQLKKEGYQPEWSNLSLNDAVL--SHGGISESDLFEQGKL 245 Query: 229 TVQDASAQGCM-TWLAPQN-GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRV 286 +QD +A + + QN EH+LD C+APGGKT I E V A+DI E++L V Sbjct: 246 IIQDEAASLVVEAFDFDQNQTEHVLDACSAPGGKTVQIAE-NIHGDVTALDIHEKKLRLV 304 Query: 287 YDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 +N +R+ + K T K D R + +F +IL+DAPCS G++RR P+I++ + + Sbjct: 305 KENARRMHVLDKVTTKACDARKAHEIFKAGEFTKILVDAPCSGLGLLRRKPEIRYTKSLQ 364 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP 404 D+ L ++Q ILD+I LK G LVY+TCS+ EEN +K FL+ EL Sbjct: 365 DLRNLQKIQLTILDSISKLLKAEGELVYSTCSISMEENEEVVKRFLRIHPGFELKPFSLS 424 Query: 405 EQPGKQN----LPGAEEGDGFFYAKL 426 + K +P + DGFF AK Sbjct: 425 KLESKTGMLKIMPDQDGNDGFFIAKF 450 >UniRef50_B5YIL4 Sun protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIL4_THEYD Length = 441 Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 124/447 (27%), Positives = 212/447 (47%), Gaps = 40/447 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINKLM 66 R +A + + VV + L L + DK D+A L E+ +GVLR L +DWL+ Sbjct: 7 RKVAVEVLNNVVGTKKPLKFALTENILSMFDKADRAFLLEVIYGVLRNLYYIDWLLEDFY 66 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETV--EGAIAIKRPQLKGLINGVLRQ 124 T++ L +YQL++ IP +A ETV E + K + ++ LR+ Sbjct: 67 KSREKLSMYTINNL-RCAIYQLVFMHIPAYAVANETVNVEKSFNGKPNVVNAILRNFLRK 125 Query: 125 FQ-----RQQEELLAEFNASDARYLHPSWLLKR-LQKAYPEQWQSIVEANNQRPPMWLRI 178 +Q R E++ + Y HP WL+ R L++ + +++++ANN++PP+ + + Sbjct: 126 YQADEIFRITEQMQTDNKNLSVVYSHPEWLITRWLKRFQLNEVKALLKANNEKPPITIAV 185 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE-----TPAPVHALPGFEDGWVTVQDA 233 R + G K + +E + P F W+ VQD Sbjct: 186 K--PEERQMIGEYFTQKGFKVSFSKHVASGLIIEGQGYEIRKTLKESPFF---WI-VQDE 239 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 ++Q L P G ILD CA+PGGKT + + ++ ++ +++RL + +N+ R+ Sbjct: 240 ASQLVCFLLEPFEGACILDACASPGGKTLLTAALIKKGTIICIENNKKRLENLQENIARV 299 Query: 294 G----------MKATVKQGDGR--YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR 341 + A + Q + S +FDRI+LDAPCS+TGVIRR+PD+++ Sbjct: 300 KKFLPDVEIQPILADICQISLKKHLDSLGFNTHKFDRIILDAPCSSTGVIRRNPDVRYRV 359 Query: 342 RDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET 401 +++I L++ Q +L+ + L G LVY+ CS PEE I++FLQ+ + + Sbjct: 360 NEQEIKRLSKTQKLMLENVSQFLVKNGILVYSVCSTEPEEGEEVIESFLQKHDEFSSIKK 419 Query: 402 GTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + P + DGFF KL++ Sbjct: 420 -------LRTYPHIDGMDGFFMGKLLR 439 >UniRef50_C8WDB8 Fmu (Sun) domain protein n=3 Tax=Zymomonas mobilis RepID=C8WDB8_ZYMMN Length = 468 Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 144/442 (32%), Positives = 210/442 (47%), Gaps = 48/442 (10%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVS-DKDKALLQELCFGVLRTLSQLDWLINKL 65 +R A Q +E V+ QG L ++ + Q + + D+AL+ L VLR LD LI+ Sbjct: 48 VRKAALQLLEAVLRQGLPLEQVIGRITQGLKQNADRALVHALAAAVLRWCHDLDQLIDSA 107 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKG----LINGV 121 A+P+ + L M L Q L + P H A+A + P + G L++GV Sbjct: 108 TAKPLAPDVKARMVLRMA-LAQKLVLKQPAHVAIATVL--------PLVDGGPRRLVHGV 158 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINR 180 R++ L E+ P R +KA+ E + A ++PP+ L + Sbjct: 159 YGSLDRREGVALPEYPTL------PDETAYRWEKAWGEPMLAAASRALAEQPPVDLTLKN 212 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + L E+ G H P E P+ L G++DG VQD SA Sbjct: 213 PEETAFWQEKLSGESLFAG--HIRLP-----EGHPPIAELAGYQDGAWWVQDISASLAAR 265 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEA-QVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L ILDLCAAPGGKT +++A + QV AVDI +RL+R++DNLKR+G+ A V Sbjct: 266 LLGKGENRTILDLCAAPGGKT---MQLASQGWQVTAVDIAAKRLTRLHDNLKRMGLSAEV 322 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 D + + ++ D ILLDAPCSA+G+ RRHPD+ + R I ++A+ Q ++L Sbjct: 323 VTAD---LADYTPKEAVDAILLDAPCSASGIFRRHPDVLYRVSSRIITDMAEQQKKLLHR 379 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-------AELCETG-TPEQPG--- 408 +K GG LVYA CS+ PEE I+ FL +D E G +P + G Sbjct: 380 ASQWVKKGGKLVYAVCSLEPEEGEAVIRDFLAHHSDYRIDSLEKETLPAGLSPSEEGWLR 439 Query: 409 --KQNLPGAEEGDGFFYAKLIK 428 +NL DGFF A + Sbjct: 440 ILPENLAEKGGNDGFFIAYFTR 461 >UniRef50_C6XFI6 Fmu (Sun) domain protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFI6_LIBAP Length = 445 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 111/385 (28%), Positives = 199/385 (51%), Gaps = 25/385 (6%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTL 55 MK N R +++ + V+ + SL+ +L + +S +D+ L++ + LR L Sbjct: 1 MKSGMNARLVSSHLLSCVMRKRISLTCLLDLEYGDSAFRLLSQRDQILVRAIVNVTLRFL 60 Query: 56 SQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-L 114 ++D +++ ++ + K+ ++ L+ V + Q+LY + +A + VE A K + Sbjct: 61 PRIDAVLDFVLISSLPRKKYSLQQLLRVSVAQILYLDVADYAVVDLAVEQAKRDKENRHF 120 Query: 115 KGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPM 174 L+N +LR+ R++ ELL + P W +RL+ Y ++ + + ++ P+ Sbjct: 121 AKLVNSILRRVSREKIELLQRIAGIS---IIPEWFKERLENFYGKE-RVLAISDACISPL 176 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL-ETPAPVHALPGFEDGWVTVQDA 233 ++ + ++W L+ + +RL E P + +LPGF +G VQDA Sbjct: 177 YIDLT-VKFDIETWAHKLNAVMLP-------TGGIRLKELPESIVSLPGFAEGVWWVQDA 228 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 SA + N +LDLCAAPGGKT + + A+V A+D+ ++RL ++ NL RL Sbjct: 229 SASIPVQLFGTLNNLSVLDLCAAPGGKTAQL--IVSGAKVTALDVSKRRLEKLRCNLDRL 286 Query: 294 GMKA-TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + A + + D +C ++ FD +L+DAPCS+TG IRRHPD+ W R DI + A Sbjct: 287 HLYAEDIIEMDA---FDYCPKKLFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSACF 343 Query: 353 QSEILDAIWPHLKTGGTLVYATCSV 377 Q ++L +K GG +V++ CS+ Sbjct: 344 QRKLLLQGISFVKPGGIVVFSNCSL 368 >UniRef50_A1B5L0 Fmu (Sun) domain protein n=30 Tax=Alphaproteobacteria RepID=A1B5L0_PARDP Length = 535 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 120/348 (34%), Positives = 173/348 (49%), Gaps = 38/348 (10%) Query: 51 VLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIK 110 VLR ++D L+ ++AR + + ++ + ++L PH A V A+A+ Sbjct: 167 VLRRADRVDLLLAPMLARR---PRPEIMRILRLAAVEMLALGEAPHGA----VNAAVALA 219 Query: 111 RPQLK------GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSI 164 R + G++N VLR+ AE A + P WL + A+ E Sbjct: 220 RASGRKGQAAAGMVNAVLRKIAGA-----AEAWARLSPQKMPFWLRAPVVAAWGEDAARA 274 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 +EA ++ + ++ T D + P + RL V ALPG+ Sbjct: 275 IEAAHEAGAV---LDLTPKGADC--------PGEALPTGSH----RLPAGTRVSALPGYA 319 Query: 225 DGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLS 284 +G VQDA+A + L PQ GE + DLCAAPGGKT + A A+V AVDI E RL+ Sbjct: 320 EGDWWVQDAAAALAVRVLDPQPGERVADLCAAPGGKTLQL--AAAGAEVTAVDISELRLA 377 Query: 285 RVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 RV +NL R G++A + D W +Q D +LLDAPCSATG IRRHP++ +R Sbjct: 378 RVAENLARCGLQARLVAADA---LDWRPDQPLDAVLLDAPCSATGTIRRHPELPRIRDGA 434 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 + EL LQ+ ++D LK GG L+YATCS+LP E Q+ A L R Sbjct: 435 GLAELTGLQARLIDHALDLLKPGGRLIYATCSLLPAEGEDQLAAVLAR 482 >UniRef50_C2HH21 Possible rRNA SAM-dependent methyltransferase RmsB n=2 Tax=Finegoldia magna RepID=C2HH21_PEPMA Length = 423 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 108/403 (26%), Positives = 194/403 (48%), Gaps = 29/403 (7%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAA 98 +D A ++ F + +D++I+K + + V ++ + ++L+ + +A Sbjct: 36 RDIAYIKRCVFTEIENRFFIDYVISKCSDLELNKLDKIVLEILRMATTEILFMKTADYAV 95 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQR---QQEELLAEFNASDARYLHPSWLLKRLQK 155 + E VE +A K +N VLR+ R +E+L + ++ LLK L K Sbjct: 96 VDEAVE--LANNLTHYKDYVNAVLREVCRINLDEEDL-----GDEIKFSINKELLKMLNK 148 Query: 156 AYPEQW-QSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYP---DAVRL 211 +Y ++ + ++++ + ++ N+ + L +GF ++P D+ + Sbjct: 149 SYSKKTVKKLLKSFFYKSDFVIKQNKLKENN-----LKTNLENQGFVLEEHPFLKDSFIV 203 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEA 271 P + F++G +QD S C L P +LD+CAAPG K+ +I E+ Sbjct: 204 RNPESIIDTNEFKEGKFIIQDGSCSLCAEVLEPMENSVVLDICAAPGSKSCNIQELTNNQ 263 Query: 272 QVVAV-DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 ++ DI+ ++ R+ +N+ + G++ Q +FDRIL+DAPCSATGV Sbjct: 264 SIIYCNDINNNKIDRIKENVYKCGVENVQYLNFDANILQEGLINKFDRILVDAPCSATGV 323 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS-----LQ 385 I ++P+IK R +D+ L + Q IL+ +LK GG LVY+TCS+L EEN ++ Sbjct: 324 INKNPEIKLFRTKKDVENLVETQRRILENCEKYLKKGGVLVYSTCSLLKEENEENVDYIE 383 Query: 386 IKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 K L+R D + G + K +P + GFF +K +K Sbjct: 384 DKLNLKR-EDIDF--YGDKNEFIKL-MPFQKGTQGFFISKFVK 422 >UniRef50_A6DSU1 tRNA and rRNA cytosine-C5-methylase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSU1_9BACT Length = 407 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 128/390 (32%), Positives = 182/390 (46%), Gaps = 36/390 (9%) Query: 46 ELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVE 104 +LC V R L+ ++ KL + G+ V +L++ + +LY +I P VE Sbjct: 48 QLCLCVFRKKESLEKIVKKLSQKRPRGR---VMHLLLPSMAAMLYMDKITPQGFADSAVE 104 Query: 105 GAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQS 163 A I +N + Q+E LL E A + L S L K +K++ EQ QS Sbjct: 105 AAKKILSKHEANFLNSFFHKLVDQKENLLRE--AQNDLNL-GSELEKNWKKSFSAEQVQS 161 Query: 164 IVEANNQRPPMWLR-INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPG 222 + + R IN +H D L D A F DA + + P Sbjct: 162 FASTLSLEAELNCRLINYDNH--DLLSPLEDLAWDSPFQFYKINDAAKFISQTPQENF-- 217 Query: 223 FEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKT---THILEVAPEAQVVAVDID 279 +QD + C++ L PQ E I DLC+APGGKT +H+LE QV A DI Sbjct: 218 ------YIQDPATSLCISLLKPQKDEVIADLCSAPGGKTLMISHLLE--GTGQVFASDIS 269 Query: 280 EQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKW 339 E+RL R+ +NL TV+ D R ++FD ILLD PCS TGV+RR PD +W Sbjct: 270 EKRLERLRENLAHQS-NVTVQCLDARSSDY---SEKFDAILLDVPCSNTGVLRRKPDARW 325 Query: 340 LRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC 399 + + EL +LQ+EIL LK GG + Y+TCS+ EN Q++ F++ D EL Sbjct: 326 SFSQKKVNELVELQAEILAQAAKMLKAGGRICYSTCSIEAAENIQQVENFIKSHPDFELS 385 Query: 400 ETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 E+ + L + DG F A L +K Sbjct: 386 ES--------RQLYPCPQHDGAFAATLQRK 407 >UniRef50_A7BCC1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCC1_9ACTO Length = 490 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 140/442 (31%), Positives = 206/442 (46%), Gaps = 54/442 (12%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILP-PLQQK-----VSDKDKALLQELCFGVLRT 54 ++K R +A + +V QG + ILP L+Q SD+D A EL G LR Sbjct: 13 LRKADEPRRIAYDVLHEVETQGAFTNIILPKALRQARRDGHFSDRDAAFTSELVHGTLRA 72 Query: 55 LSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQL 114 + +LDW+I++ + RP+ ++ +G +QLL R+P HAA++ TV+ + R L Sbjct: 73 IGRLDWVISRHIDRPLADLDPRALVVLRMGAHQLLDMRVPDHAAVSATVD----VAREHL 128 Query: 115 KG----LINGVLRQFQRQQ--------EELLAEFNASDARYLHPSWLLKRLQKA-----Y 157 +N VLR R+ + + E A RY HP+W++ + A Y Sbjct: 129 TDGPVRFVNAVLRSITREDPSEREAAMDAIADEDQALGVRYSHPAWMVTAFRDALKAHGY 188 Query: 158 PE-QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEA----GMKGFPHADYPDAVRLE 212 PE + ++ A+N+ P + L + S D L DEA + A P AV LE Sbjct: 189 PEDELLDVLVADNEVPTVTLVARPSLMSVDE---LADEAEDILDTRVALGAVSPYAVLLE 245 Query: 213 TPAPVHALPGFEDGWVTVQDASAQ--GCMTWLAP---QNGEHILDLCAAPGGKTTHILEV 267 + P LP DG QD +Q + AP N E LDLCA PGGK + + Sbjct: 246 SGDPAR-LPSIRDGRAGAQDEGSQLAALIAASAPLEGDNDERWLDLCAGPGGKAALLAGL 304 Query: 268 APEA--QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ------FDRI 319 A +V A ++ R +R+ + R V GDGR + G Q FDR+ Sbjct: 305 AAGVGARVTANEVHPHR-ARLVERTTRQFDSIEVVSGDGR---TFGGGQSAWRLGSFDRV 360 Query: 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 ++DAPCS G +RR P+ +W R D+ EL LQ E+LD + GG L Y TCS Sbjct: 361 VVDAPCSGMGSMRRRPESRWNRTPADVEELTVLQRELLDRAVALTRPGGVLTYITCSPHA 420 Query: 380 EENSLQIKAFLQRTADAELCET 401 E Q++ L + + EL +T Sbjct: 421 AETREQVERLL-KAGEVELLDT 441 >UniRef50_C9RK88 Fmu (Sun) domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RK88_FIBSS Length = 419 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 121/394 (30%), Positives = 186/394 (47%), Gaps = 32/394 (8%) Query: 46 ELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEG 105 EL GV R L++ + L + + + R + + +GL+Q+ + +P +AA+ ++VE Sbjct: 33 ELALGVCRRHLYLEYFVKSLTKKLPSLEARVI---LEMGLFQMFFMDVPDYAAINDSVEL 89 Query: 106 AIAIKRPQLKG-LINGVLRQFQRQQEELLA--EFNASDARYLHPSWLLKRLQKAYP-EQW 161 A + + L+N VLR +RQ E L P WL++R Y ++ Sbjct: 90 AKSANLGESTARLVNAVLRTARRQGEPALPPQRVRRVSVENSVPEWLVRRWFDVYGGDRA 149 Query: 162 QSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH--- 218 +++ +A +RP W+R+N + S L ++ G+ G A +E P V Sbjct: 150 EALAKATLERPTEWIRVN---LQKTSAPVLAEKIGITG---ASILYDRFIEIPRDVGVKL 203 Query: 219 --ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV 276 ALP F G + Q+ SA + L + G + D CAAPGGKT + E+ +++A Sbjct: 204 LLALPEFVKGQFSFQNPSAFEVVKLLDLKPGLKVWDACAAPGGKTALMAEMDSSLEILAS 263 Query: 277 DIDEQRLSRVYDNLKRLGMKATVKQGDGRYP--------SQWCGEQQFDRILLDAPCSAT 328 D RL ++ D + RLG+ + P S E +FDRILLD PCS Sbjct: 264 DSSASRLEKMQDLMNRLGLTNIKTEVIDLAPASATSPQQSTLSSEAKFDRILLDVPCSNM 323 Query: 329 GVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKA 388 GVI R P+ + I E+A+LQ +IL+ L GG LVYATCS P E + I Sbjct: 324 GVIARRPESVYRMTPESINEVAELQFKILENASTALAPGGRLVYATCSPDPTETTRVIAR 383 Query: 389 FLQRTADAELCETGTPEQPGKQNLPGAEEGDGFF 422 F++ E + G P PG ++ DGFF Sbjct: 384 FVK--VHPEFVKVGEPVLPGLKD----SRLDGFF 411 >UniRef50_B9JUI9 Sun protein n=44 Tax=Rhizobiales RepID=B9JUI9_AGRVS Length = 493 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 120/411 (29%), Positives = 201/411 (48%), Gaps = 21/411 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R A++ + V+++ SL ++ P +S+ D+ L++ + LR L +++ ++ Sbjct: 55 RMAASRLLAAVIDRKTSLDGMMDGDHGNPAYAALSEADRGLVRAILNTSLRFLPRIEAML 114 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGLINGV 121 +L+ P+ R +++ ++V Q++Y +P H+A+ VE A R + L+N V Sbjct: 115 ARLLDAPLPDGARALYHSLIVAAAQMVYLDVPDHSAVDLAVEQANRDPRSRRFAKLVNAV 174 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 LR+ R+++ LLA+ + P W +RL Y E+ + A Q P + + Sbjct: 175 LRRLGREKQALLADV---EDVICMPDWFFERLIAVYGEEEARRI-AQAQLTPAAIDLT-V 229 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPA-PVHALPGFEDGWVTVQDASAQGCMT 240 W L+ + ++RL + A V ALPGFE+G VQDA+A + Sbjct: 230 KADPAVWAEKLNGVVLP-------TGSIRLASFAGAVSALPGFEEGAWWVQDAAAALPVR 282 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 G+ +DLCAAPGGKT + A V AV+ RL R+ NL+RLG A + Sbjct: 283 MFGSLEGKRAVDLCAAPGGKTAQLAAAG--AVVTAVEQSANRLKRLNGNLQRLGFSAQLV 340 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 D + FD +LLDAPCS+TG RRHPD+ + + +DI +LA +Q +L Sbjct: 341 HQDLMEFNLGEDHPGFDAVLLDAPCSSTGTTRRHPDVFYTKGPQDIVKLAGVQERLLRHA 400 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQN 411 L GG++V++ CS+ P+E + L + E + PG ++ Sbjct: 401 VTLLAPGGSIVFSNCSLDPQEGEDVVARVLADHPELERVAMQVADWPGLED 451 >UniRef50_C1F543 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F543_ACIC5 Length = 440 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 130/416 (31%), Positives = 193/416 (46%), Gaps = 39/416 (9%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIP 94 ++ +D+ L+ L G LR LD ++ + + RP V + +G +QLL+ R+P Sbjct: 35 LAAQDRNLVTTLVLGTLRWQPALDQILLQFLTRPDQRLSEPVRAALRLGAFQLLHLDRVP 94 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQ 154 PHA L ++VE GL+N VLR+ + DA HP+WL R + Sbjct: 95 PHAVLNDSVELVKLSNEAYATGLVNAVLRKVMH-----MPRGAGMDAAAAHPAWLAARWR 149 Query: 155 KAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET 213 + + E Q+I E + Q P+ LR+ + + + L G++ P DA R+ Sbjct: 150 RHFGAEAAQAICEYDQQASPVALRVQSANPAEE-----LTGEGVECAPGEWLNDACRV-L 203 Query: 214 PAPVHALPGFEDGWVTVQDASAQ--GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEA 271 V F +G V VQD +Q + A + +LD CAAPGGKT + E EA Sbjct: 204 RGDVARTQAFAEGRVRVQDEGSQLVAELAAAAMPEAKRVLDACAAPGGKTAVLAERLAEA 263 Query: 272 QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVI 331 ++VA++I E+R ++ NLK + GD S E ++D IL DAPCS TG + Sbjct: 264 RIVALEISERRREQMKRNLKAYEGRVECVAGDA---SALPAEPEYDLILCDAPCSGTGTM 320 Query: 332 RRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ 391 R+P+I+ D+ Q IL + LK GG +VYATCS+ PEEN ++A Sbjct: 321 ARNPEIRLRVYPEDLTRQQARQVAILRGVAGALKPGGRVVYATCSLEPEENEDVVRAVAA 380 Query: 392 RTA---------DAELCETGTPEQPGKQN------------LPGAEEGDGFFYAKL 426 R +L G + G++N LPG DGFF A L Sbjct: 381 RVGLRVVEMTPLVEQLAARGVLTERGRENVLAAITNDQLRTLPGVHPCDGFFAAVL 436 >UniRef50_UPI0001C36EDB sun protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EDB Length = 443 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 122/443 (27%), Positives = 209/443 (47%), Gaps = 25/443 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQLDWLINK 64 R A + +++ G S SNI K SD +DK L +GV+ LD ++ Sbjct: 5 RYTAVKLLDKTFRSG-SYSNIQLDAGLKNSDLSPQDKRFCTALYYGVIERKITLDHILTG 63 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L +RP++ + ++ G+YQLLY +P +AA+ E+V+ A + G++N VLR Sbjct: 64 LSSRPLSKLDSIIITILRCGIYQLLYMENVPDNAAVNESVKLAKKFGKTSASGMVNAVLR 123 Query: 124 QFQRQQEEL---LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 F R+ ++ E Y P+ L++ + Y E + + + P ++R+N Sbjct: 124 NFIRKGKKYDMSKNEIERMSVEYSIPAELIESVVNDYGMENAKDLFVDSLGEAPTFIRVN 183 Query: 180 RTHHSR-DSWLALLDEAGMKGFPHAD--YPDAVRLETPAPVHALPG---FEDGWVTVQDA 233 D L++ G + F P ++ ++ L F G VQD Sbjct: 184 NIGDDEADEDREFLEKWGDRSFFEKSPLLPHCYKVNDKVGLYNLESNDMFIMGLFHVQDL 243 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKR 292 ++Q C +AP + +LD+CAAPGGKT + E+ + Q+ A D+ + R+ + + R Sbjct: 244 ASQLCCAAVAPTENDIVLDMCAAPGGKTFTMAEMMDGKGQIYAFDLHKHRVGLIEEGAAR 303 Query: 293 LGMKATVKQGDGRYPSQWCGE-QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 L + + + R +++ + + +IL D PCS GVIR+ P+I++ + D L + Sbjct: 304 LELSNV--KAEARDATKYYDDIPKATKILCDVPCSGYGVIRKKPEIRY-KSISDFERLPE 360 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE----TGTPEQP 407 +Q +I + +L GG +VY+TC+V EN ++ L + EL E G+ Sbjct: 361 IQYKIAENALNYLADGGEMVYSTCTVRKAENEDVVQRLLANHPELELAELPQPLGSVFSG 420 Query: 408 GKQNL-PGAEEGDGFFYAKLIKK 429 G + P DGFF AKL +K Sbjct: 421 GMAAIFPHHFGSDGFFIAKLRRK 443 >UniRef50_Q8SSK0 NUCLEOLAR PROTEIN (NOL1/NOP2 family) n=2 Tax=Apansporoblastina RepID=Q8SSK0_ENCCU Length = 370 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 101/327 (30%), Positives = 167/327 (51%), Gaps = 36/327 (11%) Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHH 183 F R+ L+ +N +LL+++ + +P ++ ++ +E + ++ PM +RIN Sbjct: 57 FCRKNCPLMETYN---------EYLLEKICEIFPRKEVEAFIEESEKQRPMTIRINTLLK 107 Query: 184 SRDSWLALLDEAGMKGFPHADYPDA--VRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 R L LL G+ + D+ V ++ P+ A P + G+ +Q A++ + Sbjct: 108 GRKDVLKLLSGRGVD-LDALSWTDSGCVVFKSSVPIGATPEYLAGYYCLQGAASMLPVLN 166 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKRLGMK-ATV 299 + + G ++DLCAAPGGKTTHI + V+ A D++E+R++ + N++R+G++ V Sbjct: 167 MDLKEGLTVVDLCAAPGGKTTHIAALMENTGVIYANDVNEERIAGLKSNIQRMGVRNCIV 226 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 DGR + + DR+LLDAPCS TGVI + P +K R +I + LQ E++ Sbjct: 227 MNMDGRKVNVG----RVDRVLLDAPCSGTGVISKDPSVKTSRTRSEIDRMVTLQKELILH 282 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-------GTPEQPGKQN- 411 + LK GG L+Y+TCSVL +EN + L + A++ E G GK Sbjct: 283 GFGMLKPGGILMYSTCSVLVKENEEVVNYLLSKCPSAKMAECEIDIGKDGFMSFKGKNYN 342 Query: 412 ---------LPGAEEGDGFFYAKLIKK 429 P DGFFYAK++KK Sbjct: 343 GSLKMARRIYPHVHNMDGFFYAKILKK 369 >UniRef50_C7N543 tRNA/rRNA cytosine-C5-methylase n=2 Tax=Slackia RepID=C7N543_SLAHD Length = 531 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 113/395 (28%), Positives = 191/395 (48%), Gaps = 25/395 (6%) Query: 18 VVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQ 74 V E+ +S ++P + ++ +D A L GV+ T LD IN+ + P Q Sbjct: 107 VRERDAFVSEVVPGVVSRMGPMKPEDVAFATRLARGVVATSGALDDFINRNLYSP-ADIQ 165 Query: 75 RTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE---- 130 V + V Y+LLY + + A+ + VE +A P+ + L N VLR+ R Sbjct: 166 PNVRDALRVSAYELLYLKKDDYVAVDQGVE-LVAYVEPKARALANAVLRKMARTASRWPF 224 Query: 131 -ELLAEFNASDARYLHPSWLLKRL-QKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSW 188 ++ + A + PSW+ KRL ++ EQ + +EA+N P+ +N + + Sbjct: 225 GDVGTDVVALSRKVAFPSWMAKRLVEEMGREQAAAFMEASNGDAPVHAAVNAIRATDEEV 284 Query: 189 LALLDEAGMKGFPHADYPDAVRLETPAPVHA---LPGFEDGWVTVQDASAQGCMTWLAPQ 245 LA+L E G P +R+ TP + + FEDG V + D SAQ ++ P Sbjct: 285 LAVLQEQGADPNLVEGIPGCIRIGTPKAIRSDVVTKLFEDGKVLISDPSAQKVASFALP- 343 Query: 246 NGE---HILDLCAAPGGKT-----THILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 GE +++ + G KT + + + +V+VD + + + + G+ + Sbjct: 344 -GEPPSAFIEVGSGRGTKTVLMQSNAMRKYGKQFPIVSVDDHPFKAKLLRNRAREYGLTS 402 Query: 298 T-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 K DGR + + FD + +DAPCS G +RRHP+I+W +RD+ ++A +Q +I Sbjct: 403 VQTKVADGRKLTSLYEKGSFDAVFVDAPCSGVGTLRRHPEIRWRLTERDVAKMADVQLDI 462 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ 391 L +KTGG +VY+TC+V EEN ++ FL+ Sbjct: 463 LIDAASLVKTGGQVVYSTCTVFREENERVVERFLK 497 >UniRef50_D0MX46 Ribosomal RNA methyltransferase nop2-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MX46_PHYIN Length = 645 Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 106/297 (35%), Positives = 154/297 (51%), Gaps = 30/297 (10%) Query: 158 PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD-AVRL-ETPA 215 P + VEAN Q P+ +R N R L + G+ P A + +++ ++P Sbjct: 223 PAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPV 282 Query: 216 PVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVV 274 P+ A P + G +Q AS+ + LAPQ E +LD+ APGGKTT+I ++ V+ Sbjct: 283 PIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTVI 342 Query: 275 AVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGR-YPSQWCGEQQFDRILLDAPCSATGVIR 332 A D+ +QRL NL RLG+K T V DGR PS + G FDR+LLDAPC+ GVI Sbjct: 343 ANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKG---FDRVLLDAPCTGMGVIA 399 Query: 333 RHPDIKWLRRDRDIPELAQLQSEIL----DAIWPHLKTGGTLVYATCSVLPEENSLQIKA 388 R P IK + ++D+ LA LQ E+L DA+ KTGG ++Y+TCSV+ +EN + Sbjct: 400 RDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDY 459 Query: 389 FLQRTADAELCETGTPE-QPG----------------KQNLPGAEEGDGFFYAKLIK 428 L++ +L +TG +PG ++ P DGF+ AK K Sbjct: 460 ALRKRC-VKLVDTGLDHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKK 515 >UniRef50_C7M6W6 Fmu (Sun) domain protein n=22 Tax=Bacteria RepID=C7M6W6_CAPOD Length = 412 Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 94/272 (34%), Positives = 142/272 (52%), Gaps = 14/272 (5%) Query: 161 WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHAL 220 W + A N P+ LR+N S + L + G++ +P DYPDA++L + + Sbjct: 148 WTDELHALNSLAPVVLRVNTLKTSLEHLQQFLRQEGVETYPLRDYPDALQLVERSNIFKT 207 Query: 221 PGFEDGWVTVQDASAQGCMTWLAPQNG-EHILDLCAAPGGKTTHILEVA-PEAQVVAVDI 278 F DG VQDAS+Q ++ + + ++D CA GGKT H+ + + Q++A+DI Sbjct: 208 QAFADGLFEVQDASSQKVAPFMQIDDKVKRVIDTCAGAGGKTLHLATLMQNKGQIIAMDI 267 Query: 279 DEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDI 337 EQ+L + +R G+ K + + + G FDR+L+DAPCS GV+RR+PD Sbjct: 268 YEQKLQELKRRARRNGVFNIETKLIEPKQLKRMHG--TFDRVLIDAPCSGLGVLRRNPDA 325 Query: 338 KWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE 397 KW + + E+ Q EIL LK GG LVYATCS+LP EN Q++ FL Sbjct: 326 KWKLQPEFLDEIRTTQQEILQQYSKLLKKGGKLVYATCSILPSENHQQVQTFLA------ 379 Query: 398 LCETGTPEQPGKQNLPGAEEG--DGFFYAKLI 427 E G + + + A + DGF+ A+LI Sbjct: 380 -SEVGKEYRLEAEEVIFAHQSGYDGFYMARLI 410 >UniRef50_C7LUK3 Sun protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUK3_DESBD Length = 424 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 140/450 (31%), Positives = 211/450 (46%), Gaps = 61/450 (13%) Query: 8 RSMAAQAVEQVVEQGQSL----SNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 R +A + + ++ Q L +L P+Q + DK L EL +G LR ++D+L++ Sbjct: 7 RRLALDILRRTLDHKQDLQAAVDEVLNPVQ---AGPDKGLATELAYGYLRMRGRIDFLLS 63 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLK----GLI 118 +L+ P+ + ++ V +Y+LL+ +RIP +A T++ A+ + R +L + Sbjct: 64 QLLKNPVQ-TSPIMKRILGVAMYELLFLSRIPDYA----TLDWAVTLVRERLDQTMGKVA 118 Query: 119 NGV----------LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEA 167 NGV +R + Q + A Y P WL + +Y EQ Q+ ++A Sbjct: 119 NGVLRSLLRLGLSVRFEEYYQTKTAGHDQFLSAWYSCPQWLARMWLGSYGKEQTQAFLQA 178 Query: 168 NNQRPPMWLRINRTHHS----RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGF 223 PP+ +RINRTH R++ L ++ GF +P+ ++ HA+ Sbjct: 179 TLSAPPLGVRINRTHAQAETLRENLQPLQQDSSNWGFALTQWPEFLQ-------HAV--- 228 Query: 224 EDGWVTVQDASAQGCMTWLAPQNGEH-ILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQR 282 +G T Q +AQ M L ++ +LD CA GGKT + E V A D++ R Sbjct: 229 AEGAATRQSLAAQKIMDALGVEHWPSPVLDACAGRGGKTYLMSEQG--KNVWASDVNVFR 286 Query: 283 LSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL 340 L ++ RLG A QG G YP + Q I LD PCS GV+ R PDIKW Sbjct: 287 LRQLKAEGARLGFDIPAFRSQGQGPYPLR----QTPRTIFLDVPCSGLGVLSRRPDIKWK 342 Query: 341 RRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE 400 R D L +LQ EIL A L +GG LVY TC++ PEEN QI F + E Sbjct: 343 RTAADCAGLVKLQEEILRAAADLLTSGGCLVYVTCTLNPEENEKQIDRFA--SLHPEFSR 400 Query: 401 TGTPEQPGKQNLPGAEEGDG-FFYAKLIKK 429 +Q G EG G FFY +++K Sbjct: 401 L-------RQAQSGPAEGLGEFFYGAVLRK 423 >UniRef50_D2RG94 RNA methylase, NOL1/NOP2/sun family n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG94_ARCPR Length = 445 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/301 (29%), Positives = 152/301 (50%), Gaps = 7/301 (2%) Query: 135 EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDE 194 E + YL P+W ++++++ E+ + + +A N+ P + +R+N + + L Sbjct: 143 EIERLEFEYLLPAWYIRKMKELLGEEAEELFKAFNREPMISIRVNTLKATVKEVIDHLRR 202 Query: 195 AGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLC 254 G + + P ++ E P + G VQ+ ++ L P+ E ++DLC Sbjct: 203 QGKEVIVSSVVPTVLKFEGPYDFDKSKLYRKGKFVVQEEASALASILLDPKPNETVVDLC 262 Query: 255 AAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCG 312 AAPGGKT H+ E+ V+ A D+DE RL R+ + +KR G+K + + D R G Sbjct: 263 AAPGGKTIHMAELMRNRGVIHAFDVDELRLKRMEELIKRCGVKIVKIYKMDARKAVDVLG 322 Query: 313 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVY 372 E D+++LDAPC++ G + ++P+++W R+ I E+AQLQ E+L+ LK G ++Y Sbjct: 323 ESIADKVMLDAPCTSDGTLMKNPELRWRIREEKIEEIAQLQYELLNTGIDLLKPKGRILY 382 Query: 373 ATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG-----KQNLPGAEEGDGFFYAKLI 427 TCS+ EEN ++ L+ D +L G + P GFFYA L Sbjct: 383 CTCSIFREENEDVVERVLKERDDVKLVPLEGYYSEGFLKVTIRAFPHKHNTIGFFYALLE 442 Query: 428 K 428 K Sbjct: 443 K 443 >UniRef50_Q2RXU7 tRNA/rRNA cytosine-C5-methylase n=8 Tax=Alphaproteobacteria RepID=Q2RXU7_RHORT Length = 454 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 125/412 (30%), Positives = 180/412 (43%), Gaps = 37/412 (8%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMV-----GLYQLLY 90 + KD+ + L + LR ++L WLI++ P H L++ + L Sbjct: 38 MGSKDRRAVTALAWSTLRHRARLSWLIDRFGGTPKARALVIAHLLVVERQSAEDVRMLFI 97 Query: 91 TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLL 150 TR A+ + +L + G +F+ +D R P WL Sbjct: 98 TR-------AQHAPQPLTDAEERLVDGLAGKPLEFREMP---------ADVRLEVPDWLP 141 Query: 151 KRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVR 210 L+ + E+ + + A P+ LR+N R+S L + P A P A+R Sbjct: 142 PLLEPLFGERLEDELRALQAEAPLDLRVNALKSDRESARLALAREQVDTRPGALSPCALR 201 Query: 211 LETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAP 269 E V F DG V VQD +Q A G +LDLCA GGKT + + Sbjct: 202 AEGRPNVAITAPFCDGLVEVQDEGSQMVALLCAVAPGMSVLDLCAGAGGKTLALAAGMEN 261 Query: 270 EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ--FDRILLDAPCSA 327 + +VA DI E RL+R L+R G+ ++ +W ++ FD +L+DAPCS Sbjct: 262 KGTLVATDISEGRLARAQTRLQRAGVHNVTRKVLDPETRKWLKRRKASFDVVLVDAPCSG 321 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 TG RR+PD +W I L QS +LD +K GG LVYATCS+LP EN QI Sbjct: 322 TGTWRRNPDARWKLTPDTISALNAEQSALLDRAAALVKPGGRLVYATCSLLPAENEAQIA 381 Query: 388 AFLQRTAD------AELCETGTPE-QPGKQNL------PGAEEGDGFFYAKL 426 AFL+R D AE +P PG ++ P + DGFF + L Sbjct: 382 AFLERRDDYRALPVAETWAKVSPAPYPGAADVSWLRLTPASHGTDGFFVSIL 433 >UniRef50_C1SIP0 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIP0_9BACT Length = 379 Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 111/397 (27%), Positives = 189/397 (47%), Gaps = 63/397 (15%) Query: 43 LLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAE 101 L +++ F R L ++ ++KL M G + + + +G Q+L+ IP +AA+ E Sbjct: 34 LYRKIYFETFRHLGFIEKCLDKLYTE-MPGPE--LRAALALGTCQILFMDDIPDYAAVNE 90 Query: 102 TVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQW 161 +V I ++ + + +N VLR R++EE L+E+N R P W +KR + ++ Sbjct: 91 SV---ILVQMNK-RSFVNAVLRNVGRRKEEFLSEYNV---REDFPEWFVKRWETKLGDEL 143 Query: 162 QSIVEANNQRPPMW------LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPA 215 + NQ+P + ++I++ D ++D A Sbjct: 144 DVFLTDLNQKPSFYGVDTDTMKIDKLEEKSDDHY-IMDRASY------------------ 184 Query: 216 PVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVA 275 V L G C+ P + ILD CAAPGGKT + + P+A++ A Sbjct: 185 SVAKLAG--------------ECL----PMS---ILDCCAAPGGKTFVLAKTYPDARIFA 223 Query: 276 VDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHP 335 V+ +R ++ +N+ LG+ + + + E +FD I+LDAPCSA G I+RHP Sbjct: 224 VEKYYKRFEKLKENMTELGLGNVDCIKNDIFEME--TEAEFDLIMLDAPCSALGTIKRHP 281 Query: 336 DIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD 395 +++W R ++DI E A+ Q IL + L GG ++Y+ CS+ EE IK F++ + Sbjct: 282 EVRWFRNEKDIKENARRQFGILKKVSKFLSKGGKIIYSVCSMEDEETVDVIKEFMEWDSS 341 Query: 396 AEL----CETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 +L C+ + ++LP + DGFF A L K Sbjct: 342 FKLVTPSCDEDFKDGDFFRSLPYKNDADGFFGAVLTK 378 >UniRef50_B9Y7F7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7F7_9FIRM Length = 412 Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 127/433 (29%), Positives = 206/433 (47%), Gaps = 37/433 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R A Q + ++ +GQ + L Q +S+++K + + +GVLR L W L+ Sbjct: 5 RKRAWQGLNAILNEGQYANLWLRQHGQTLSEEEKRWVTAVIYGVLRHREPLRWQWRDLV- 63 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 + +V L+ + +YQL Y A+ V A+ + KGL+N VLRQ R Sbjct: 64 --RNVPEPSVAVLLDMSVYQLFYLDKGAEYAI---VNDAVELCPRSKKGLVNAVLRQLLR 118 Query: 128 Q------QEELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINR 180 + + E +A+ + HP WLL+ + Y E+ + I A+ + + +RIN Sbjct: 119 RGPKPLPKPESIADLALVTS---HPQWLLQLWKAHYGEEKMRRIALADLEEAAVSVRINP 175 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 SR++ LA + ++ + + T + P ++G + +QD S+Q Sbjct: 176 LKLSREA-LAQRPDWALES-------NGWTIRTAGNPVSDPWLKEGKIVIQDRSSQQVAL 227 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L P+ + + D C+APG KTT + + E ++A D+ RL+ V + +R G AT+ Sbjct: 228 MLDPKPNDTVFDACSAPGTKTTQLAAMMNNEGSILACDLHAHRLALVEEAAQRCG--ATI 285 Query: 300 KQG---DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 Q D Q +QFDR+LLD PCS GV+R P+I + E+ LQ+ I Sbjct: 286 IQTRTLDAAQADQQLAGRQFDRVLLDVPCSGLGVLRHKPEILLRLTPDSLDEIVALQAAI 345 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAE 416 L P K GGTLVY+TC++ +EN Q+ AFL + + EL T P Sbjct: 346 LSHCAPLCKPGGTLVYSTCTLNRKENDKQVAAFLLQHPEFELMAEQTI-------FPDEG 398 Query: 417 EGDGFFYAKLIKK 429 DGF+ AK+ ++ Sbjct: 399 AQDGFYIAKMTRR 411 >UniRef50_B7CB38 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB38_9FIRM Length = 397 Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 118/434 (27%), Positives = 202/434 (46%), Gaps = 48/434 (11%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +R +A+++VV + + L +V +KD+AL + +G ++ +K + Sbjct: 1 MRKWIWKALDEVVNKDVYSNLYLRNHLHEVDEKDRALATRIFYGTIQNYRYCKACWSKYV 60 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + K L+ + YQLL+ ++P +A + + V A I + GL N VL + Sbjct: 61 KNKLNPKMDV---LLTMSTYQLLFLDKVPSYAIVNDAVNIAKKINM-KYAGLTNAVLHKV 116 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLR-----IN 179 + + + +A +Y P WL K Y E+ + +A+ PM++R N Sbjct: 117 KPIETDNMA------LKYSLPDWLYKMWTSQYGQEKALVMAKASVNILPMYVRRNVLNTN 170 Query: 180 RTHHSRDSWLALLDEAGM-KG--FPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 + D ++ + D + KG + H DY ++ G+++ QD + Sbjct: 171 ESDFDLDMFVRVQDALYIYKGNDYFHHDY-----------------YQKGYMSAQDEGSF 213 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGM 295 ++ PQ E ILD CAAPG K+ + E+ + + A D+ R + ++ KRLG+ Sbjct: 214 EIAKFVDPQENERILDCCAAPGTKSMAMAEMMHNKGHIDAYDLHAHRKDLIENDAKRLGI 273 Query: 296 KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 + + +++ +DRIL D PCS GV+ R PDIK D+ L LQ Sbjct: 274 --DIIHAGVQDATEFKSSNMYDRILCDVPCSGYGVLSRKPDIKLHMVPEDMDTLIPLQYS 331 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGA 415 IL+ + ++K GGTLVY+TC++ +EN QI+ FL+ + L E T Q Sbjct: 332 ILNNVCQYVKVGGTLVYSTCTMNKKENEKQIEKFLKAHKEFSLVEEKTIFSNATQ----- 386 Query: 416 EEGDGFFYAKLIKK 429 DGF+ AKL++K Sbjct: 387 ---DGFYMAKLVRK 397 >UniRef50_Q8TGY2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGY2_METKA Length = 431 Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 111/427 (25%), Positives = 198/427 (46%), Gaps = 20/427 (4%) Query: 20 EQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM-ARPMTGKQRTVH 78 E+G SL L + + + +Q L ++R L +D ++N+++ + + Sbjct: 3 ERGHSLKAALRNALRGIGGRRHRFVQALAHELVRVLGNVDLVLNRVLRGSTVEDLHPYLR 62 Query: 79 YLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR-QQEELLAEFN 137 + VG +++ + R P V+ P+ N +LRQ +R EE+++ Sbjct: 63 NALRVGTWEIHWRREHPGPVTKAVVDVVKERVGPKHARFANAILRQVERVNPEEVISSIR 122 Query: 138 ASDAR----YLHPSWLLKRLQKAYP--EQWQSIVEANNQRPPMWLRINRTHHSRDSWLAL 191 AR Y P W ++ ++ A+ ++ + +EA N+RP ++R+N + + Sbjct: 123 DPTARFAARYNFPKWYVELVRSAFDSMDELRKFLEACNRRPARYVRVNTLVSDPEEVVRR 182 Query: 192 LDEAGMKGFPHADYPDAVRLETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 L G++ D PD +R+ + PV P F+ G V Q ++ P+ G + Sbjct: 183 LKRRGIEAERDPDVPDVLRIRSAETPVIKTPEFKKGEVYPQTKASAAVAHAAEPEPGMTV 242 Query: 251 LDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ--GDGRYP 307 +DLCAAPGGKTTH+ ++ +++A+D+ +R + +++ V+ D R Sbjct: 243 VDLCAAPGGKTTHLAQLMEGRGEIIAIDMHPKRFGTLKKRVRQFHADDIVETLCMDARDA 302 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP-ELAQLQSEILDAIWPHLKT 366 GE D +L+D PC+ TG + P+ +W R P + AQLQ E+L LK Sbjct: 303 PDQLGEGIADLVLVDPPCTGTGSVYSKPEKRWDRETTGEPTKWAQLQWELLKVAVRLLKP 362 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-------GTPEQPGKQNLPGAEEGD 419 GG +VY+TCS+ EN I+ ++R EL + G ++ P + D Sbjct: 363 GGRIVYSTCSITLTENERLIERLVRRYRGLELVDVPLEWASPGVRMPEARRIWPHRHDTD 422 Query: 420 GFFYAKL 426 GFF A++ Sbjct: 423 GFFVARV 429 >UniRef50_C6X123 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Flavobacteriaceae RepID=C6X123_FLAB3 Length = 401 Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 93/283 (32%), Positives = 145/283 (51%), Gaps = 15/283 (5%) Query: 146 PSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADY 205 P WL + ++K W+ + A N++ P LR N + ++ L + ++ +Y Sbjct: 124 PEWLAETMEKELGPTWEREMNALNEQAPTILRANTLKTTTKELISDLKDENVESSTIRNY 183 Query: 206 PDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL 265 PDAV+L V F+DG VQDAS+Q L Q G ++D CA GGKT H+ Sbjct: 184 PDAVQLVEKKNVFLTSAFKDGLFEVQDASSQKIGELLDVQEGMRVIDACAGAGGKTLHLA 243 Query: 266 EVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ--GDGRYPSQWCGEQQFDRILLD 322 + + Q++A+DI +L+ + KR G + D + + G DR+L+D Sbjct: 244 ALMINKGQIIALDIYAWKLAELKRRAKRAGAHNIEARLIDDNKVIKRLHGTA--DRVLID 301 Query: 323 APCSATGVIRRHPDIKWLRRDRD-IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEE 381 APCS GV++R+PD KW + D+D I + + Q +IL LK GG +VYATCS+LP E Sbjct: 302 APCSGLGVLKRNPDSKW-KIDQDFIDRIKKEQQQILQDYSKMLKKGGKMVYATCSILPSE 360 Query: 382 NSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYA 424 NS Q+ FL+ + L ++ + ++ DGF+ A Sbjct: 361 NSEQVGIFLKNNEEFTLIR--------EEKVMPSDGFDGFYMA 395 >UniRef50_UPI0000ECD55E Putative RNA methyltransferase NOL1 (EC 2.1.1.-) (Proliferating-cell nucleolar antigen p120) (Proliferation-associated nucleolar protein p120). n=1 Tax=Gallus gallus RepID=UPI0000ECD55E Length = 722 Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 116/339 (34%), Positives = 163/339 (48%), Gaps = 36/339 (10%) Query: 120 GVLRQFQRQQEELLAEFNASDARYL-HPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 GV R+ R ++E LA A Y + +LLK L +P + + +EAN P+ +R Sbjct: 295 GVKREEGRTRQEYLALLRRDMAAYYSYSDFLLKMLMDIFPLPELINFLEANEVPRPVTIR 354 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDA--VRLETPAPVHALPGFEDGWVTVQDASA 235 N R L G+ P + V ++ P+ A P + G +Q AS+ Sbjct: 355 TNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSSVPIGATPEYLAGHYMLQGASS 414 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLG 294 + LAPQ E ILD+C APGGKT++I ++ ++A D + +RL V NL RLG Sbjct: 415 LLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSNAERLRSVVGNLHRLG 474 Query: 295 M-KATVKQGDGR-YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + A V DGR +P G FDR+LLDAPCS TGVI + P IK + ++DI A L Sbjct: 475 VTNAVVSNCDGRQFPKVLGG---FDRVLLDAPCSGTGVISKDPAIKTNKDEKDILRCAHL 531 Query: 353 QSEIL----DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG 408 Q E+L D++ +TGG +VY TCS+ EEN + L++ + L TG G Sbjct: 532 QKELLLSAIDSVNATSETGGYIVYCTCSITVEENEWVVDYALKKR-NVRLVATGL--DFG 588 Query: 409 KQNL-------------------PGAEEGDGFFYAKLIK 428 K+ P DGFF AKL K Sbjct: 589 KEGFTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKLKK 627 >UniRef50_A6FYF2 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYF2_9DELT Length = 453 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 134/449 (29%), Positives = 211/449 (46%), Gaps = 39/449 (8%) Query: 6 NLRSMAAQAVEQVVEQGQSLSN-ILPPLQQKVSD---KDKALLQELCFGVLRTLSQLDWL 61 N R +A + + ++ EQ Q SN IL ++ D +D+ L+ L +GVLR +LD Sbjct: 12 NPRRLAVRTLREI-EQRQGFSNRILSEQLERFPDLDPRDRGLITTLVYGVLRHRGRLDAH 70 Query: 62 INKLMARP--MTGKQRTVHYLIMVGLYQLLYTRIP-PHAALAETVEGAIAIKRPQLKGLI 118 ++ +P + G+ RT+ + V Y++L P P A+ + R +LKG+I Sbjct: 71 LDAAADKPHKLKGELRTI---LRVAAYEVLELDRPLPIASAEASKAAKRIDPRGRLKGMI 127 Query: 119 NGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLR 177 +L + + + +L A R+ P+WL++R E ++ A + P + LR Sbjct: 128 AKILAKVAKDKADLDARLRPGQ-RWSLPAWLVERWSAQLGAEGLEARARALTEVPSVDLR 186 Query: 178 INRTHHSRDSWLALL--DEAGMK--GFPHA--DYPDAVRLETPAPVHALPGFEDGWVTVQ 231 ++ + +RD+ L D ++ P A D P +R+ + P FEDG + +Q Sbjct: 187 VDLSRSTRDAVREQLVADHPSVRFVELPEAAGDQPQCLRVRGGGDLFHGPLFEDGLIAIQ 246 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRL------S 284 +Q + L PQ GE LD CA G KT I E + +VA D +RL + Sbjct: 247 SLGSQQAVRVLDPQPGERTLDACAGMGTKTIQIAEHMGRRGALVASDASAERLDELERSA 306 Query: 285 RVYDNLKRLGMKATVKQGDGRYPSQWC------GEQQFDRILLDAPCSATGVIRRHPDIK 338 R L G+ V D P E FD +LLDAPC+ G + RHP+++ Sbjct: 307 RARIELDADGIALQVVHADLAGPELPAELDAPPDEAGFDAVLLDAPCTGLGNLARHPELR 366 Query: 339 WLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL 398 W + D+ E A LQ+ +L+ ++ GG LVYA CS+ PEE + AFL A A Sbjct: 367 WTSQASDVLERAGLQASLLERCAAWVRPGGRLVYAVCSLEPEEGPAIVDAFLATEAGAAF 426 Query: 399 CETGTPEQPGKQN-LPGAEEGDGFFYAKL 426 EQ ++ P A+ DGF+ A+L Sbjct: 427 ------EQTKREAWTPEAQRSDGFWLARL 449 >UniRef50_Q0ADT5 Fmu (Sun) domain protein n=50 Tax=Betaproteobacteria RepID=Q0ADT5_NITEC Length = 424 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 120/413 (29%), Positives = 183/413 (44%), Gaps = 56/413 (13%) Query: 35 KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIP 94 ++ ++++ E FG+LR L+ L K AR + L + +Q + R Sbjct: 38 QLGQNGRSMIAETVFGILRHRFFLEVLTGKATARELV--------LAYLARFQGMNLR-- 87 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQ 154 +L LI V ++ +Q + + E R P WL+ +LQ Sbjct: 88 ------------------ELTPLIREVESKWIQQIKAVKLEEQPQFIRAEFPEWLVGKLQ 129 Query: 155 KAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET 213 +++ E + + Q P+ +R+N R+ +A+L + G++ P +RL Sbjct: 130 QSWSDEDILRLGQVLQQPAPLDIRVNSLLAKREEVIAVLKQEGIEAQSTPFSPVGIRLTG 189 Query: 214 PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQ 272 ++ F G + VQD +Q LAP+ GE ++D CA GGKT + + + Sbjct: 190 NPAINRNALFLSGKIEVQDEGSQILGFLLAPKRGEMVVDFCAGAGGKTLLLGALMHSRGR 249 Query: 273 VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQ---------QFDRILLDA 323 + A DI E+RL+ + LKR G+ +P E+ + DR+L+DA Sbjct: 250 LYAFDISEKRLNNLKPRLKRSGLSNV-------HPQHIDSEKDIKLKRLAGKIDRVLVDA 302 Query: 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 PCS G +RR+PD+KW + I EL + Q IL A LK GG LVYATCS+LPEEN Sbjct: 303 PCSGLGTLRRNPDLKWRQSPESINELQKKQIAILTAAAKLLKPGGRLVYATCSLLPEENQ 362 Query: 384 LQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE----------GDGFFYAKL 426 I+ FL + G K NLP E DGFF A L Sbjct: 363 QVIERFLADHPQFSILNCGELLAQQKINLPDTGEFLQLSPLYHNTDGFFAAVL 415 >UniRef50_UPI000194B9ED PREDICTED: nucleolar protein 1, 120kDa n=1 Tax=Taeniopygia guttata RepID=UPI000194B9ED Length = 778 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 112/339 (33%), Positives = 162/339 (47%), Gaps = 36/339 (10%) Query: 120 GVLRQFQRQQEELLAEFNASDARYL-HPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 GV R+ R ++E LA A Y + +LL +L +P + + +EAN P+ +R Sbjct: 350 GVRREEGRSRQEYLALLRRDMAAYYSYSDFLLAKLMDIFPLPELINFLEANEVPRPVTIR 409 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDA--VRLETPAPVHALPGFEDGWVTVQDASA 235 N R L G+ P + V ++ P+ A P + G +Q AS+ Sbjct: 410 TNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSTVPIGATPEYLAGHYMLQGASS 469 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLG 294 + LAPQ E ILD+C APGGKT++I ++ ++A D +RL V NL RLG Sbjct: 470 LLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSSAERLRSVVGNLHRLG 529 Query: 295 M-KATVKQGDGR-YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + A V DGR +P G FDR+LLDAPCS TGVI + P +K + ++DI A L Sbjct: 530 VTNAVVSNCDGRQFPKVIGG---FDRVLLDAPCSGTGVISKDPAVKTNKDEKDIQRCAHL 586 Query: 353 QSEI----LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG 408 Q E+ +D++ +TGG +VY TCS++ EEN + L++ + L TG G Sbjct: 587 QKELILSAIDSVNAASETGGYIVYCTCSIMVEENECVVDYALKKR-NVRLVATGL--DFG 643 Query: 409 KQNL-------------------PGAEEGDGFFYAKLIK 428 K+ P DGFF AK K Sbjct: 644 KEGFTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKFKK 682 >UniRef50_C5NYN0 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN0_9BACL Length = 441 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 121/442 (27%), Positives = 205/442 (46%), Gaps = 29/442 (6%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 N R +A + + ++ Q SNI Q KV ++DK + E+ +G ++ L+ ++ Sbjct: 5 NARHIAYEVLYTII-QEDGYSNITLNKYFNQYKVEEQDKRFISEVVYGSIKNKLYLEHIL 63 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + K V ++++ +YQLLY + P A + E V+ I +NG+ Sbjct: 64 KSYSKGRVKPK---VKVILLMSIYQLLYMDKTPNFAVIDEAVKLGKKIAGNITGKFVNGI 120 Query: 122 LRQFQRQQEELLAEFNASDARYL----HPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWL 176 LR +R L ++ + ++ PS L L+ Y E+ Q IV + N++ + Sbjct: 121 LRNIERNASNLDLKYKNATEKFCIENSCPSELYNILKIQYGVEKAQKIVISFNEKSKNSI 180 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD-ASA 235 R N ++ + L A + D +L + + F G+ VQD ASA Sbjct: 181 RYNPLKITKKDLIEKLGSAVSESEICEDSLVLNKLNLDSSL-----FTKGYYIVQDEASA 235 Query: 236 QGCMTWLAPQNGEH-ILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 + P + ++ ILD CAAPGGK+ HI + +++ D +L + DN ++LG Sbjct: 236 LVASSIGLPIDKKYKILDTCAAPGGKSLHIASKYFNSSLISCDKYIHKLKLIEDNKEKLG 295 Query: 295 M-KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + VK+ D + +FD ++ D PCS GVI+ P+IK+ + + ++A+LQ Sbjct: 296 ITNIEVKEQDATL-NNTSFNNKFDIVICDVPCSGIGVIKNKPEIKYKITNSYVEDIAKLQ 354 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-------TPEQ 406 ++LD ++K G L+Y+TC++ EN I+ FL+ D L T E Sbjct: 355 YDVLDNSKHYVKQEGILMYSTCTIDKRENIKNIEKFLKENKDFSLESISLKNSIVKTREN 414 Query: 407 PGKQNLPGAEEGDGFFYAKLIK 428 + LP DGFF AKL K Sbjct: 415 GVLEILPDEYSCDGFFIAKLKK 436 >UniRef50_C5A6U4 SAM-dependent tRNA/rRNA cytosine-C5 methylase n=6 Tax=Thermococcus RepID=C5A6U4_THEGJ Length = 451 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 104/397 (26%), Positives = 198/397 (49%), Gaps = 28/397 (7%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDK----ALLQELCFGVLRTLSQLDWL 61 + + + A A+ V E+ S + L + +KV+ KD+ L F + + +++D++ Sbjct: 8 SFQEVVADALSLVEERELSSKHALERVFRKVAGKDREKARGLAHAYVFEIEKWRAKIDFI 67 Query: 62 INKLM-ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAA---LAETVEGAIAIKRPQLKGL 117 IN ++ + + L+ +G +++ + ++PP A + V+ R + Sbjct: 68 INSVLKGSKVEDLDPYLANLLRIGTFEIHFRKVPPAIATDSIIRVVKERFDFSRAKF--- 124 Query: 118 INGVLRQFQR-QQEELLAEFNASD------ARYLHPSWLLKRLQK--AYPEQWQSIVEAN 168 +N ++ ++ E L D R+ HP W ++ + + Y E + ++ +N Sbjct: 125 VNALMHSIEKFDVERALKRLKERDRIEWLSVRFSHPRWYVEYVIELLGYDEAVRLLL-SN 183 Query: 169 NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVR-LETPAPVHALPGFEDGW 227 N+ ++R N DS L+E G++ PD ++ L+ PV L +++G Sbjct: 184 NRPQRYYVRANTLKTDMDSLRDYLEENGVRT-ALTPVPDVLKVLDYKTPVTRLDWYKEGK 242 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRV 286 +QD ++ L P+ GE +LDL AAPG KT H + + ++VAVD RL R+ Sbjct: 243 FVIQDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAASLMENKGEIVAVDYSYDRLMRM 302 Query: 287 YDNLKRLGMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 + +K LG+K + DG+ + + +FDRI+LDAPCS++G R+ P++KW +R Sbjct: 303 KEKMKILGIKNVKLVHADGQ---SFRDKAKFDRIILDAPCSSSGTYRQFPEVKWRFDERK 359 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 I + +Q +L + +L+ GG + Y+TCS+ +E+ Sbjct: 360 IKRIISVQRNMLRNAYENLRDGGVMTYSTCSIRIDED 396 >UniRef50_C1A605 Putative rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A605_GEMAT Length = 428 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 117/376 (31%), Positives = 179/376 (47%), Gaps = 32/376 (8%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLL-YTRIPPHA 97 +D+ +QEL +GVLR +LD ++ + ++ V ++ +G YQLL +PP+A Sbjct: 21 RDRRWVQELVWGVLRHRERLDAILATRIRGGLSVLDDGVLDILRLGTYQLLSMDSVPPYA 80 Query: 98 ALAETVEGAIAIKRPQLKG---LINGVLRQFQRQQEELLAEFNAS--DARYL---HPSWL 149 A+ ++VE A+KR G L+N VLR+ R++ + A DA L HPSW+ Sbjct: 81 AIGQSVE---AVKRKHGIGAGKLVNAVLRRIDRERATIEPALPADPVDALALQHSHPSWV 137 Query: 150 LKR--LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD 207 + R Q E Q ++ NN P+ +R + D+ L ++ + P+ Sbjct: 138 VGRWVSQFGIAETAQ-LLALNNTPAPVVVRPHGVQA--DALAESLTQSDVSTRRVPLVPE 194 Query: 208 AVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV 267 ++ + P + + F G VQD +A + G + DLCAAPG K LE+ Sbjct: 195 SLEITGPVALTEVDAFRRGQFYVQDPAATLVAQYAHVPEGSVVADLCAAPGSKA---LEM 251 Query: 268 APEAQ-VVAVDIDEQRLSRVYDNLKRLGMKATVKQ-------GDGRYPSQWCGEQQFDRI 319 A A+ V+A D E R+ R+ RLG+ T D PS D + Sbjct: 252 ARRARLVIAADRSESRVDRMRSGFDRLGIDTTSSNRAMVTLVADATQPSI----DPVDAV 307 Query: 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 L+D PC+ TG RRHPD +W + D L LQ +IL A ++ G L+Y+TCS+ Sbjct: 308 LVDVPCTGTGTFRRHPDARWRLQASDFAVLGALQRQILTAAAAVVRPNGLLIYSTCSLEA 367 Query: 380 EENSLQIKAFLQRTAD 395 EEN + AFL D Sbjct: 368 EENDEVVDAFLASHPD 383 >UniRef50_C7H5H8 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Faecalibacterium prausnitzii RepID=C7H5H8_9FIRM Length = 440 Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 115/418 (27%), Positives = 187/418 (44%), Gaps = 33/418 (7%) Query: 33 QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR 92 +QK+ +DKA + + VL LD+++ + + + + V ++ L Q Y + Sbjct: 32 RQKLEGRDKAFAGAIFYTVLEHQGTLDFILEQFLPKGLARLDPQVREILRAALAQARYMQ 91 Query: 93 IPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKR 152 +P AA+ E V+ K+ GL+N VLR+ ++ AR+ + + L Sbjct: 92 VPVSAAVNEAVKLTRTFKKASASGLVNAVLRK--------ACNYDLETARFRNETQRLMV 143 Query: 153 LQKA-----------YPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFP 201 L A YPE+ I+ LR N + L E+G+K Sbjct: 144 LGSAGQDVAEFLRTHYPEEALGILTHTADGGCTSLRANCLKMDAAALCEKLLESGVKSAQ 203 Query: 202 HADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKT 261 P +V + P F++G V+ ++Q + + G+ ++DLCAAPGGKT Sbjct: 204 PGLVPGSVLAKFEGSPAEHPLFKEGCFHVEGQASQLAALCVEAKPGDTVIDLCAAPGGKT 263 Query: 262 THIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCGEQQFDRI 319 + E+ + + + D+ E R+ + ++R+G T D P+ DRI Sbjct: 264 LLLAEEMQGQGALYSCDVAEHRVGLIRSAVERMGFAHVTALCNDATRPNPKL--PAADRI 321 Query: 320 LLDAPCSATGVIRRHPDIKW--LRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 L+DAPCS G++ + PDI++ L + R EL QS ILD LK GG LVY+TC++ Sbjct: 322 LVDAPCSGLGILAKKPDIRYKTLEKARH-DELLATQSSILDTAAALLKAGGRLVYSTCTI 380 Query: 378 LPEENSLQIKAFLQRTADAELCETG-------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 P EN Q+ AFL R + + T + G ++P DGFF + K Sbjct: 381 DPAENEEQVAAFLARHPEFRVVRPAVAFPDGMTVGEHGALSVPTRTGMDGFFLCAMQK 438 >UniRef50_C1TRU2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRU2_9BACT Length = 479 Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 120/436 (27%), Positives = 196/436 (44%), Gaps = 26/436 (5%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 AA V + V +G+ S L + +VS+KD+ L L + ++R S ++ + + Sbjct: 46 AALEVWREVRRGRFASESLRAISDRVSEKDRPLAATLVYSLIRRESLWKEIVGRFLKTGS 105 Query: 71 TGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE 130 +G V +MVG L R L + + + ++N VLR+ Sbjct: 106 SGVSPAVRDALMVGAAGSLELRTFEPRVLVNALVEWTKCRDERGSRVVNAVLRRIVEGGP 165 Query: 131 ELLAEFNASDA------RYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINRTHH 183 E+LAE S A R P W K + ++ + ++++E ++Q + LR++ T Sbjct: 166 EILAEIERSVAFSDLAMRSGVPLWAAKSWESSFGRIEGRALIELHSQPVSLALRVS-TGV 224 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC-MTWL 242 R + L+E G+ D P ++RLE A LPG+++G +T Q S+ + + Sbjct: 225 DRSEMVQRLEEGGVPAVESPDLPFSIRLEGTALPTILPGYDEGKITPQSESSMLVPLAFT 284 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 +LD+CA GGKT + + PEA + D+ R+ ++RLG+ VK Sbjct: 285 GRGKFSRLLDMCAGRGGKTGQLAQAFPEACLEGWDLSGPRIKAALKEMERLGISDRVKLS 344 Query: 303 DGRYPSQWCGEQQF--DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 G + F D +LLDAPCS +G RRHP+ KW ++ +Q+++L Sbjct: 345 VGDSMEL---DPSFLPDGVLLDAPCSGSGTWRRHPESKWRLSQDELARYGAMQAKLLGRA 401 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AEL---------CETGTPEQPGKQ 410 + TGGT++Y TCS+ EEN + + +D EL C G P G Sbjct: 402 LDLVSTGGTVLYCTCSLFREENEQVVAKVMSGRSDVVELEPPHELVSRCRKGRPW--GYY 459 Query: 411 NLPGAEEGDGFFYAKL 426 P DGF+ A L Sbjct: 460 TWPDNPWTDGFYMALL 475 >UniRef50_A9LZZ8 SUN-family protein n=29 Tax=Betaproteobacteria RepID=A9LZZ8_NEIM0 Length = 419 Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 113/366 (30%), Positives = 174/366 (47%), Gaps = 47/366 (12%) Query: 94 PPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLH-------- 145 P AALA V G + Q+K L++ ++ E L A + Sbjct: 71 PRKAALAALVLGR-STNISQIKDLLD-------EEETEFLGNLKARKTEFSDGLNTAAEL 122 Query: 146 PSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALL--DEAGMKGFPH 202 P WL+++LQ+ + E+ + + NQ P+ +R+N RD L LL + A + P+ Sbjct: 123 PQWLVEQLQQHWNEEEILAFGRSINQAAPLDIRVNTLKGKRDKVLPLLQAESADAEATPY 182 Query: 203 ADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTT 262 + P +RL+ ++ F DG + VQD +Q + + GE I+D CA GGKT Sbjct: 183 S--PWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALLVGAKRGEIIVDFCAGAGGKTL 240 Query: 263 HI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQ------- 314 I ++A + ++ A DI E+RL+ + + R G+ +P + E Sbjct: 241 AIGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI-------HPERISSEHDTRIARL 293 Query: 315 --QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVY 372 + DR+L+DAPCS G +RR+PD+K+ + + L + Q ILDA +K G LVY Sbjct: 294 AGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQHSILDAASKLVKPQGRLVY 353 Query: 373 ATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAE---------EGDGFFY 423 ATCSVLPEEN LQ++ FL + E Q K +L + + DGFF Sbjct: 354 ATCSVLPEENELQVERFLSEHPEFEPVNCAELLQSLKVDLDTGKYLRLDSARHQTDGFFA 413 Query: 424 AKLIKK 429 A L +K Sbjct: 414 AVLQRK 419 >UniRef50_C8NZ84 rRNA methylase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ84_ERYRH Length = 404 Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 106/394 (26%), Positives = 188/394 (47%), Gaps = 31/394 (7%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLL-YTRIPPHA 97 +D+A + + L+ LD+ L+ + + + R V I +G Q +IP +A Sbjct: 32 QDQAFVSAFVYATLQNSLFLDYQYEDLVDKKLPKEVRLV---IKMGCAQYFKMDKIPDYA 88 Query: 98 ALAETVEGAIAIKRPQLKGLINGVLRQ-FQRQQEELL-AEFNASDARYLHPSWLLKRLQK 155 ++ETV+ AI + + G++N VL++ +R + E+ ++ + +Y P W++K L K Sbjct: 89 LVSETVDLCKAIGKHRYSGVVNAVLKKVIERNEREISGSDLEVASIQYSMPLWIMKLLSK 148 Query: 156 AYPEQWQ-SIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP 214 Y E + + + P ++R N + D + + K L P Sbjct: 149 QYSESFSLAYAQYCQDIKPTYVRFNALKPTTDDLSDFILDDQDK-----------HLAKP 197 Query: 215 APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQV 273 A + ++G+V VQD ++Q + W+ + +LD C PG KT I + + Sbjct: 198 ALFKS-KYLQEGYVLVQDINSQEVVRWMDLEPSLSVLDCCCGPGTKTVQIANYLENSGTI 256 Query: 274 VAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIR 332 V++ E R L+R + A + D Q+ +Q++DRIL+DAPCS GV+ Sbjct: 257 TGVELHESRAEATRALLERCNVVNANIITSD---VLQFQTDQKYDRILVDAPCSGLGVLS 313 Query: 333 RHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 D+++ +D+ EL ++Q E+L +K G LVY+TC++ +EN Q++ FL Sbjct: 314 HKHDLRYHIFPQDLDELVKIQQEMLIHTSQFVKKDGILVYSTCTLNRKENEKQVQTFLDH 373 Query: 393 TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 ++ EL + T P +GDGF+ AKL Sbjct: 374 HSNFELIKEVTLN-------PVETKGDGFYIAKL 400 >UniRef50_D1PM68 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM68_9FIRM Length = 437 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 123/427 (28%), Positives = 196/427 (45%), Gaps = 43/427 (10%) Query: 25 LSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVG 84 L PPL+ +D A + + VL LD+L+++ +P+ V ++ G Sbjct: 28 LKKCTPPLE----GRDAAFAARIFYTVLEYQPLLDFLLDRFSKKPVARLDAPVRAILRAG 83 Query: 85 LYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYL 144 L Q + +P AA+ E+V+ A+ + G++N VLR+ A + + + Sbjct: 84 LAQARFMEVPLPAAVNESVKLTKAMGKTSAAGMVNAVLRR--------AAVYPVKEKDFA 135 Query: 145 HPSWLLKRLQ--------------KAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 P L+RLQ + Y E+ + A RP +R+N + ++ + Sbjct: 136 DP---LERLQIYDCLSRPVAALLYQEYGEETFDLAAAFRNRPVSAVRVNTLRTTDEALIQ 192 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 L G P +P A+ +E A F +G VQ ++Q LA + G+ + Sbjct: 193 ALQAEGHTVRP-GPWPHALLVEFQGSPAAGNSFAEGHYHVQGLASQFAALSLAVRPGQKV 251 Query: 251 LDLCAAPGGKT-THILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPS 308 LDLCAAPGGK+ T E+ ++++ ++ R+S + +R G++ A Q D P Sbjct: 252 LDLCAAPGGKSLTLAEEMQNTGELISGEVLPGRVSLIQKAFERCGIRCARAVQNDATVPR 311 Query: 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD-IPELAQLQSEILDAIWPHLKTG 367 + G FDR+L D PCS GVI + PDI++ +D D + L +Q +IL L Sbjct: 312 KEWG--TFDRVLCDVPCSGLGVIAKKPDIRY--KDLDGMENLCAIQQKILQNGADSLAEN 367 Query: 368 GTLVYATCSVLPEENSLQIKAFLQ-----RTADAELCETGTPEQP-GKQNLPGAEEGDGF 421 G LVY+TC++ +EN Q++ FL R EL G + P G LP DGF Sbjct: 368 GRLVYSTCTINVQENQKQVENFLCDHPEFRVVAPELTLPGMEQGPFGTLFLPHKTGTDGF 427 Query: 422 FYAKLIK 428 F A L K Sbjct: 428 FVAILEK 434 >UniRef50_A0CUX2 Chromosome undetermined scaffold_29, whole genome shotgun sequence n=2 Tax=Oligohymenophorea RepID=A0CUX2_PARTE Length = 554 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 109/329 (33%), Positives = 161/329 (48%), Gaps = 30/329 (9%) Query: 124 QFQRQQEELLAEFNASDARYL-HPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRT 181 +F R EELL E Y + S L+ + P + + ++AN+ P+ +R+N Sbjct: 183 KFSR--EELLNELKKHLCTYYGYNSDLMSHFSSMFKPAELVAFLDANDAPRPITIRVNTL 240 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDA--VRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 R L + G+ D+ V E+ P+ A P + G +Q AS+ + Sbjct: 241 RTRRKELAQTLVQRGVNLDSVGDWTKVGLVIYESKVPIGATPEYLSGHYMLQSASSFLPV 300 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKRLGM-KA 297 LAPQ E ILD+ AAPGGKTT+I ++ + V+ A D + R ++ NL+R+G+ Sbjct: 301 LALAPQMNERILDMAAAPGGKTTYIAQLMKNSGVIFANDTSKDREKALFYNLQRMGVTNC 360 Query: 298 TVKQGDGR-YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 V DGR +P + FDR+LLDAPC+ G+I + P IK ++ RDI + + LQ E+ Sbjct: 361 IVTNYDGRKFPKVM---KNFDRVLLDAPCTGLGIISKDPSIKAQKQMRDILKHSHLQKEL 417 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-EQPG------- 408 + + K GG +VY+TCSV EN + ++ L +L ETG PG Sbjct: 418 ILSAIDCCKKGGIVVYSTCSVSVHENEVVLQYALN-NRHVKLIETGLEVGNPGLLKFDDK 476 Query: 409 ----KQNL-----PGAEEGDGFFYAKLIK 428 NL P DGFFYAKL K Sbjct: 477 KFHPSMNLARRIYPHVHNMDGFFYAKLKK 505 >UniRef50_A0KI43 tRNA and rRNA cytosine-C5-methylase n=27 Tax=Gammaproteobacteria RepID=A0KI43_AERHH Length = 437 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 16/286 (5%) Query: 146 PSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADY 205 P+WL K + E W + A P +LR+N +R+ A L + + P Sbjct: 159 PTWLEKLGSEQLGEAWPAERAALAWMPKRYLRVNSLKCTREELQAALAKEQVTTIPVEGV 218 Query: 206 PDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL 265 A+++ + A + F DGW QDA +Q L G ++D CA GGKT H+ Sbjct: 219 DSALQVTSDAALFRTKAFADGWFEQQDAGSQQVAAALEVSPGMRVIDACAGAGGKTLHLA 278 Query: 266 EVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQF----DRIL 320 + + +++A+D++E +L +NLK+ +A + R + ++ DR+L Sbjct: 279 AMMEGKGRLLAMDVEEWKL----ENLKQRARRAGAHNVETRVITSSKTVKRLKESADRVL 334 Query: 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE 380 LD PCS GV++R+PD KW +P L LQ+EIL +K GG LVYATCS+LPE Sbjct: 335 LDVPCSGLGVLKRNPDAKWRDTAERLPVLVALQAEILQRYSQMVKVGGLLVYATCSILPE 394 Query: 381 ENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 EN Q+ FL + L + T P A DGF+ A++ Sbjct: 395 ENRQQVDKFLAANENYRLRDDHTVS-------PAATGFDGFYMARI 433 >UniRef50_P46087 Putative ribosomal RNA methyltransferase NOP2 n=28 Tax=Euteleostomi RepID=NOP2_HUMAN Length = 812 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 107/302 (35%), Positives = 151/302 (50%), Gaps = 21/302 (6%) Query: 118 INGVLRQFQRQQEE------LLAEFNASDA-RYLHPSWLLKRLQKAYP-EQWQSIVEANN 169 I G+LR F Q+EE L A Y + +LL +L +P + +EAN Sbjct: 246 IVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEANE 305 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDA--VRLETPAPVHALPGFEDGW 227 P+ LR N R L G+ P + V ++ P+ A P + G Sbjct: 306 VPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGH 365 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRV 286 +Q AS+ + LAPQ E ILD+C APGGKT+++ ++ V+ A D + +RL V Sbjct: 366 YMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSV 425 Query: 287 YDNLKRLGMKATV-KQGDGR-YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 NL RLG+ T+ DGR +P G FDR+LLDAPCS TGVI + P +K + ++ Sbjct: 426 VGNLHRLGVTNTIISHYDGRQFPKVVGG---FDRVLLDAPCSGTGVISKDPAVKTNKDEK 482 Query: 345 DIPELAQLQSEIL----DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE 400 DI A LQ E+L D++ KTGG LVY TCS+ EEN + L++ + L Sbjct: 483 DILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR-NVRLVP 541 Query: 401 TG 402 TG Sbjct: 542 TG 543 >UniRef50_A0LDB1 Fmu (Sun) domain protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDB1_MAGSM Length = 404 Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 93/270 (34%), Positives = 143/270 (52%), Gaps = 13/270 (4%) Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 ++ P+ LR+NR SR+ L E+G++ P A D +RL + P F +G Sbjct: 136 EQAPVDLRVNRQRASREGVAQRLLESGVESAPLAISADGLRLTKRHLLRDHPVFLEGLAE 195 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYD 288 +QD +Q L P G+ ++D CA GGKT H+ + + +++A+D E RL R+ Sbjct: 196 IQDGGSQCIAPLLQPVAGQLLVDFCAGGGGKTVHLAALMQNKGRILALDTQEHRLKRLAP 255 Query: 289 NLKRLGMKA----TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 LKR +K T++ + S+W G+ D +L+DAPCS +G +RRHP+IKW Sbjct: 256 RLKRNQIKMVQSHTIRHERDPWLSRWYGKA--DGVLVDAPCSGSGTLRRHPEIKWQLEPG 313 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET--- 401 + LA Q +L+ +K GG LVYATCS+L +EN ++AFL+ L E Sbjct: 314 QVGSLAIQQGALLEGAAHLVKRGGRLVYATCSLLAQENEEVVEAFLRTNRGFRLEEIQGL 373 Query: 402 GTPEQ---PGKQNLPGAEEGDGFFYAKLIK 428 G ++ P + +P + DGFF A LI+ Sbjct: 374 GDLQRLATPYLKVMPQQAQTDGFFSAVLIR 403 >UniRef50_D1N0M6 Fmu (Sun) domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0M6_9BACT Length = 450 Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 90/266 (33%), Positives = 134/266 (50%), Gaps = 10/266 (3%) Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 RPPMWLR+ D +A L AG+ H DAV + + L F +G V Sbjct: 180 RPPMWLRMQTAET--DHLVADLSAAGLSVSRHGKIADAVAVTGRVNLFTLDAFRNGLFEV 237 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDN 289 QD ++Q AP++GE LD CA GGKT + + VVA DI +L + Sbjct: 238 QDLASQCIGLAAAPKSGERWLDACAGAGGKTLQLAALMNRTGTVVATDIRSYKLDDLRTR 297 Query: 290 LKRLGM-KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 +R G ++ DG+ P Q +FD +L+DAPCS +GV RR+PD +W + ++ + Sbjct: 298 ARRAGFPNIRTREWDGK-PYQGKQAARFDGVLVDAPCSCSGVWRRNPDGRWTLKAEELTD 356 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE-----TGT 403 + ++Q E+L A P +K GG L+YATCS+ PEEN ++ FL + L + TG Sbjct: 357 ITRVQFEVLTAAAPAVKPGGVLIYATCSLFPEENGGVLERFLAAHPEYTLEDFPNPLTGE 416 Query: 404 PEQPGKQNLPGAEEGDGFFYAKLIKK 429 P Q + D F A++ ++ Sbjct: 417 PTGGTLQVFSYDGDCDSMFVARMRRQ 442 >UniRef50_C2KVE0 Possible rRNA (Cytosine-5-)-methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KVE0_9FIRM Length = 449 Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 108/362 (29%), Positives = 173/362 (47%), Gaps = 45/362 (12%) Query: 36 VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIP 94 + +++KA L G+L QLD++I+ + + + V + + +YQLL+ +IP Sbjct: 77 LGNREKAFLTRSSHGILERYLQLDYVISLYSSVKLKKLKPVVLLSLRIAIYQLLFMDKIP 136 Query: 95 PHAALAETVEGAIAIKRPQLKGLI---NGVLRQFQRQQEELLAEFNASDARYLHPSWLLK 151 HA + E V+ +IK+ +L+GL+ N VLR+ ++EE+ K Sbjct: 137 EHAIVDEAVK---SIKKRKLQGLVPFVNAVLRKIVGEKEEIK-----------------K 176 Query: 152 RLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 +L E S+ PP L + + R+ +A+ + F +D +R Sbjct: 177 KLASLPKEDAVSLC-----LPPDILEVFLKDYGRERTIAMAE-----AFLQSDGGFYIRN 226 Query: 212 ET------PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL 265 E+ + F G VT+QD S+Q L + G +LD C+APGGK HI Sbjct: 227 ESGEGERVSGNILEEERFRSGAVTIQDFSSQAVGKSLKLKEGALVLDCCSAPGGKACHIA 286 Query: 266 EVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWC---GEQQFDRIL 320 + +V A D + +L + +N KRLG++ ++ D R + GE D +L Sbjct: 287 SLLKGSGKVYARDAQKDKLRYIVENQKRLGLENMEIEHWDARVLDERFIQEGEGILDAVL 346 Query: 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE 380 DAPCS GVI R PDI+ + EL LQ EIL + ++K GG L+Y+TCS+ + Sbjct: 347 CDAPCSGLGVIGRKPDIRLHFTKEALEELQSLQREILSTVQAYVKKGGQLLYSTCSLSFK 406 Query: 381 EN 382 EN Sbjct: 407 EN 408 >UniRef50_D2NSI1 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Micrococcaceae RepID=D2NSI1_9MICC Length = 697 Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 116/405 (28%), Positives = 179/405 (44%), Gaps = 43/405 (10%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R+ + + V E + +LP ++ +D EL +G LR D ++ Sbjct: 204 RATVFEVLRSVAESDAYANLVLPKAIRSHRLDHRDAGFATELTYGTLRHQGTYDAILRHC 263 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + RP+ T ++ +G++QLL R+P HAAL ++V A IN VLR+ Sbjct: 264 VDRPLEKVGTTTLIVLRMGVHQLLNMRVPAHAALNQSVSLAREKIGAGPASFINAVLRRV 323 Query: 126 QRQQEELLAEFNASDAR---------YLHPSWLLKRLQKAY------PEQWQSIVEANNQ 170 + E E DA+ HP+W+++ +++A + + ++EA+N Sbjct: 324 SERTPEEWYELIIKDAKDDTERMALLASHPAWIVRSMRQALVAHGRPASEIEQLLEADNL 383 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P + L L LDEA +G + + L T + L +G V Sbjct: 384 APVVNLVAL-------PGLGSLDEAREQGAVDGELVEGSALYTSGDLARLESVREGTVRA 436 Query: 231 QDASAQGCMTWLA--PQNGEHI--LDLCAAPGGKTTHI--LEVAPEAQVVAVDIDEQRLS 284 QDA +Q LA P +G LDLCA PGGK + L + A +VA + R Sbjct: 437 QDAGSQLVARALAAAPLDGTDTAWLDLCAGPGGKAALLGALGIQRGASLVANEAAPHRAQ 496 Query: 285 RVYDNLKRLGMKA-TVKQGDGR------------YPSQWCGEQQFDRILLDAPCSATGVI 331 V +++ L + TV GDGR P Q FDR+++D PCS G + Sbjct: 497 LVESSMRPLPEDSYTVLTGDGRQIRETLRKNASDLPESIEPGQLFDRVMVDVPCSGLGAL 556 Query: 332 RRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 RR P+ +W + RDI EL LQ ++LDA + GG + Y TCS Sbjct: 557 RRRPEARWRKSPRDIAELLPLQRQLLDAAIEATRPGGVIAYVTCS 601 >UniRef50_B6R7S3 Putative sun protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7S3_9RHOB Length = 430 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/264 (32%), Positives = 141/264 (53%), Gaps = 14/264 (5%) Query: 146 PSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD- 204 P WL Q+ + + ++ + ++R P+ +R+N S+D L L P A Sbjct: 127 PEWLWPHFQENFGDDALAVGRSLSERAPIDMRVNTVKSSQDKVLKRLSHL----HPEASG 182 Query: 205 -YPDAVRLE-----TPAP-VHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAP 257 P VRLE +P V A F GW +QD ++Q Q GE +LDLCA Sbjct: 183 LSPVGVRLEPVVGPRKSPHVQAEESFRKGWFELQDEASQIASILSGAQPGEQVLDLCAGG 242 Query: 258 GGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQF 316 GGK+ + ++ + Q+ A D + RL+ +YD + R G++ ++ D + S + + Sbjct: 243 GGKSLALAAQMQNKGQIYAYDAHKTRLAPLYDRMARAGVR-NIQTIDPQTGSLDICDGKM 301 Query: 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 DR+ +DAPCS TGV RR PD KW + + + Q+++L+ +++GG L+YATCS Sbjct: 302 DRVFVDAPCSGTGVWRRRPDTKWRVTENALNGRIEDQAQVLETATRFVRSGGKLIYATCS 361 Query: 377 VLPEENSLQIKAFLQRTADAELCE 400 ++P EN LQ++AFL++ D +L + Sbjct: 362 LVPAENQLQVQAFLEKHTDFKLVD 385 >UniRef50_Q1MPZ7 TRNA and rRNA cytosine-C5-methylases n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MPZ7_LAWIP Length = 447 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 131/452 (28%), Positives = 199/452 (44%), Gaps = 60/452 (13%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQS----LSNILPPLQQKVSDKDKALLQELCFGVLRTLSQ 57 KK + R +A A++++ E GQ L+NIL L +S +D AL+ EL +G LR + Sbjct: 13 KKTKTAREIATIALQKIKE-GQPIQVLLNNIL--LTYPLSKQDIALVTELVYGYLRLEIR 69 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKG 116 + W++ + + + V +I + Y+LL+ +IPP+A + V + L G Sbjct: 70 IVWILEQFLKKS-EHLPYEVKLIIGLATYELLFLDKIPPYATIHTAVSTIKSKFGKILAG 128 Query: 117 LINGVLRQ-FQRQQEELLAEFNA-------SDARYLH-----PSWLLKRLQKAYPEQWQS 163 + N L+ F++ + ++N D YL P W++K Y Q Sbjct: 129 VANASLQTIFRKSKHNDGPKYNTFYKQRLPEDIHYLSIWYSIPLWIIKLWISNYGTQKTL 188 Query: 164 IVEANN-QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPG 222 + A++ QRP +R+N + D+W L + G P Sbjct: 189 KLAASSLQRPYFCIRVNPIY---DNWRELYENLCQNGGIPIGRSGIYFKPNRKPKELQYY 245 Query: 223 FEDGWVTVQDASAQGCM------TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV 276 E G++++Q A +Q M TW P I D CA GGKT+ +LE A Sbjct: 246 LEQGYISIQGAGSQIVMDALDIQTWKIP-----IWDACAGRGGKTSLLLEWGIPI-FAAS 299 Query: 277 DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQ-----------QFDRILLDAPC 325 DI +L + KRL + PS +C Q ILLD PC Sbjct: 300 DISLSKLQGLIAETKRLKLLT---------PSIFCSSSTQPALKNVLCSQLKTILLDVPC 350 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 S G + RHPDIK R +D+ +L QLQ +IL+ W L G L+Y TC+V P EN Q Sbjct: 351 SGLGTLSRHPDIKKFRTPKDVDKLIQLQKKILNTAWEFLPPQGELIYITCTVNPSENEQQ 410 Query: 386 IKAFLQRTADAELCE--TGTPEQPGKQNLPGA 415 + FL+ A L + G P++ G + GA Sbjct: 411 VIQFLKDYPQASLKKQWEGIPDRFGTDIMFGA 442 >UniRef50_C0BGG9 Fmu (Sun) domain protein n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGG9_9BACT Length = 403 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 91/290 (31%), Positives = 145/290 (50%), Gaps = 12/290 (4%) Query: 142 RYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEA-GMKG 199 R+ P WL K A+ E W+ + N+ P+ LR+N + + LL++ G+ Sbjct: 118 RHSIPDWLDKVGMDAFGEVIWEKELSKQNEGGPLVLRVNTLKTTPEKLQKLLEKKFGILS 177 Query: 200 FPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGG 259 + YP+A+ LE + + L ++ G +QDA++Q W+ P+ G I+D CA GG Sbjct: 178 NLNESYPEALILEKHSKLTHLEPYQKGLFEIQDANSQLVSHWVNPKPGMKIIDACAGAGG 237 Query: 260 KTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDR 318 KT H+ + + ++A+D ++L ++ R + ++ D Sbjct: 238 KTLHMAALMENKGNIIAIDNYPKKLEQLIKRAHRNRINIIQTNDASEITVFESNLEKADV 297 Query: 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 +L+DAPCS G++RR+P KW + EL +LQ +IL P +K GG L+YATCS+ Sbjct: 298 VLIDAPCSGLGILRRNPAAKWHMTPERMEELQKLQLQILKKNAPLVKKGGRLIYATCSIF 357 Query: 379 PEENSLQIKAFLQRTADAELCETGTPEQPGKQN--LPGAEEGDGFFYAKL 426 P ENSLQI++FL E+G K+ L DGFF A+L Sbjct: 358 PSENSLQIQSFLN-------TESGKRFNLKKEETFLAYKTGFDGFFIAEL 400 >UniRef50_Q8TGZ4 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGZ4_METKA Length = 452 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 107/411 (26%), Positives = 191/411 (46%), Gaps = 31/411 (7%) Query: 44 LQELCFGVLRTLSQLDWLINKLMARP-MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET 102 + CF +++ L +D + + + V + VG +++ + + P A E Sbjct: 46 IHAYCFELMKRLRTVDAFLEATIRNAKLFDLDPWVRNALRVGTFEMKFNDVKPAIATNEA 105 Query: 103 VEGAIAIKRPQLKGLINGVLRQFQRQQ-EELLAEFNASDAR----YLHPSWLLKRLQKAY 157 V+ + +N VL +R + ++L + R Y HP W +K L Sbjct: 106 VKIVVECVGEGPARFVNAVLYDVERLELSDVLNRAKDTVERLAIEYSHPEWFVKHLMDLL 165 Query: 158 PE-QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL---ET 213 E + +++ANN+ P +LR++ D + L++ G+ D P +R+ + Sbjct: 166 GENELTKLMDANNREPERYLRVHAHMVDPDKAILALEDDGVAVEEDPDLPFMLRVVDHDV 225 Query: 214 PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQ 272 P PV P + GWV QD ++ L P+ G+ +LD CAAPGGK+ ++ + E + Sbjct: 226 P-PVRTEP-YRRGWVAYQDKASAAAAYALRPEPGDRVLDACAAPGGKSAYLYALTEGEIE 283 Query: 273 VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIR 332 + VD++ +RL + N +R G++A +++ D + E FD L+D PCS++G Sbjct: 284 LTCVDVNPRRLREMRRNFRRWGIEARLRRADSSRLYRETDE-TFDLALVDPPCSSSGAYV 342 Query: 333 RHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 R P+ KW + R + A+ Q IL + P ++ TLVY+TCSV E+ ++ FL+ Sbjct: 343 RAPEAKWTVKWRHVKRYARGQLSILRGVAPLVER--TLVYSTCSVTVVEDESVVRRFLRE 400 Query: 393 TADAELCETGTPEQPG---------------KQNLPGAEEGDGFFYAKLIK 428 + E+ E PG ++ P +GFF A+L++ Sbjct: 401 FDEFEVEEPFGFGSPGFDSWMNERYPWADRVRRFWPHRHRTEGFFVARLVR 451 >UniRef50_Q1IY91 rRNA methyltransferase, sun family protein n=3 Tax=Deinococcus RepID=Q1IY91_DEIGD Length = 427 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 116/393 (29%), Positives = 177/393 (45%), Gaps = 29/393 (7%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAA 98 +D L L +G LR L+ + L+ K R L++ G ++ L PPHAA Sbjct: 45 RDAGLATHLVYGTLRFAPMLEAALAPLLREKTHSKTRA---LLLAGAFEKLVLGTPPHAA 101 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP 158 L+E V A + R GL+N VLR+ +R E + RY P WL+ + AY Sbjct: 102 LSEYVNVA-RMARLAPPGLVNAVLRRVERPAE-------TEETRYALPRWLIDIFRAAYG 153 Query: 159 EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH 218 + +++ Q P+WL ++ D + L+ G P + D V L P + Sbjct: 154 PRADAVLADQLQPQPLWLSLS------DEGVRRLEAEGSVVEPGPNGVDRVTLARP--LR 205 Query: 219 ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDI 278 + G + ++ + L G+ +LDL G K + A A V +VD+ Sbjct: 206 DTAAYRQGQAQPINPASLSVVDALGEVKGQRVLDLAGGAGVKAAML--AARGAHVTSVDL 263 Query: 279 DEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIK 338 ++ NLKRLG+ A D P + +LLDAPC+ TG +R HP+IK Sbjct: 264 LARKHDAARANLKRLGLHADFLTHDLTRPLEV---PPAPLVLLDAPCTGTGTLRAHPEIK 320 Query: 339 WLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD--- 395 + E+A LQ+ +L ++ GG LVY+ CSV P+E ++AFL + Sbjct: 321 LRLTPAAVEEMAALQARLLPNAAAVVEPGGLLVYSVCSVTPQEGQEVVRAFLAEHPEFMS 380 Query: 396 AELCETGTPE-QPGKQNLPGAEEG-DGFFYAKL 426 L + G P G+ L E+G DGFF A+L Sbjct: 381 EPLSDLGLPTVSAGEGVLTVPEDGVDGFFIARL 413 >UniRef50_UPI00015B4FE9 PREDICTED: similar to CG8545-PA n=2 Tax=Neoptera RepID=UPI00015B4FE9 Length = 796 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 106/335 (31%), Positives = 163/335 (48%), Gaps = 32/335 (9%) Query: 122 LRQFQRQQEELLAEFNASDARYL-HPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 LRQ R + E L Y + S+L+++L + +P + +E++ + PM +R N Sbjct: 418 LRQPDRSRSEYLELLKTDLCTYFSYNSFLMEKLMQMFPLSELLEFLESSEVQRPMTIRTN 477 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDA--VRLETPAPVHALPGFEDGWVTVQDASAQG 237 R L G+ P + + V + P+ A P + G +Q AS+ Sbjct: 478 TLKTRRRDLAHALINRGVNLDPIGKWTNVGLVVYSSQVPMGATPEYLAGHYILQGASSFL 537 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKRLGMK 296 + L P+ E ILD+CAAPGGK++HI + V+ + D+++ R+ V N RLG+ Sbjct: 538 PVMALEPKINERILDMCAAPGGKSSHIAALMKNTGVLFSNDVNKDRIKAVIGNFHRLGIT 597 Query: 297 ATVK-QGDGR-YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 +V DGR PS G FDR+LLDAPC+ TGV+ + P +K + + DI LQ Sbjct: 598 NSVICSYDGRKLPSVIKG---FDRVLLDAPCTGTGVVAKDPSVKTNKDEVDIQRCCTLQR 654 Query: 355 EIL----DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT------- 403 E+L D++ ++GG +VY+TCS+LPEEN I + R D ++ TG Sbjct: 655 ELLLAAIDSVNARSESGGIIVYSTCSILPEENEW-IVDYALRKRDVKVVPTGLEFGADGF 713 Query: 404 ---------PE-QPGKQNLPGAEEGDGFFYAKLIK 428 P + K+ P DGF+ AKL K Sbjct: 714 TNYRQHRFHPSLKLTKRFYPHMHNMDGFYVAKLKK 748 >UniRef50_C6R1D5 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R1D5_9MICC Length = 659 Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 113/399 (28%), Positives = 179/399 (44%), Gaps = 44/399 (11%) Query: 15 VEQVVEQGQSLSNILPP---LQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 V + V + + +N++ P ++ +D EL +G LR D ++++ + RP+ Sbjct: 172 VLRSVAESDAYANLVLPKAIRSHRLDHRDAGFATELTYGTLRHQGTYDAILSRCVDRPIE 231 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEE 131 T ++ +G++QLL R+P HAAL ++V A IN VLR+ + E Sbjct: 232 KVGTTTLIVLRMGVHQLLNMRVPAHAALNQSVSLAREKIGAGPASFINAVLRRVSERTPE 291 Query: 132 LLAEFNASDAR---------YLHPSWLLKRLQKAY------PEQWQSIVEANNQRPPMWL 176 E DA+ HP W+++ +++A + + ++EA+N P + L Sbjct: 292 EWYELIIEDAKDDTERMALLASHPGWIVRSMRQALVAHGRPASEIEQLLEADNLAPVVNL 351 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 L L+EA +G + + L + L +G V QDA +Q Sbjct: 352 VAL-------PGLGSLEEAREQGAIDGELVEGSALYASGDLARLESVHEGTVRAQDAGSQ 404 Query: 237 GCMTWLA--PQNGEHI--LDLCAAPGGKTTHI--LEVAPEAQVVAVDIDEQRLSRVYDNL 290 LA P +G LDLCA PGGK + L + A +VA + R V ++ Sbjct: 405 LVARALAAAPLDGTDTAWLDLCAGPGGKAALLGALGIQRGASLVANEAAPHRAQLVESSM 464 Query: 291 KRLGMKA-TVKQGDGR------------YPSQWCGEQQFDRILLDAPCSATGVIRRHPDI 337 + L + TV GDGR P Q FDR+++D PCS G +RR P+ Sbjct: 465 RPLPEDSYTVLTGDGRQIRETLRKNASDLPGSIEPGQLFDRVMVDVPCSGLGALRRRPEA 524 Query: 338 KWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 +W + RDI EL LQ ++LDA + GG + Y TCS Sbjct: 525 RWRKSPRDIAELLPLQRQLLDAAIEATRPGGVIAYVTCS 563 >UniRef50_B3R6E3 Ribosomal RNA small subunit methyltransferase B (RRNA (Cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase) n=53 Tax=Betaproteobacteria RepID=B3R6E3_CUPTR Length = 467 Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 150/307 (48%), Gaps = 36/307 (11%) Query: 146 PSWLLKRLQKAYPEQWQSIVEANNQRP-PMWLRINRTHHSRDSWLALLDEAGMKGFPHAD 204 P WL L + + E + + + RP P+ LR+N SR++ LA L AG+ P Sbjct: 167 PEWLYDELVRQHGEAFAAALGDAWLRPAPLDLRVNLGKTSREAALAELQAAGLGAEPTPM 226 Query: 205 YPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI 264 P +R+ ++ LP F +G V VQD +Q + +AP+ GE ++D CA GGKT + Sbjct: 227 APAGIRMTGKPALNQLPIFVNGLVEVQDEGSQLLCSLVAPRRGEMVVDFCAGAGGKTLAL 286 Query: 265 -LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK------------ATVKQGDGRYPSQWC 311 + ++ A D+ E+RL+ + L R G+ A +K+ G+ Sbjct: 287 GAAMRSTGRLYAFDVSEKRLANLKPRLARSGLSNVHPVLIDSERDAKIKRLAGKA----- 341 Query: 312 GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLV 371 DR+L+DAPCS G +RR+PD+KW + + EL QS ILD+ +K GG +V Sbjct: 342 -----DRVLVDAPCSGLGTLRRNPDLKWRQSPESVLELTAKQSAILDSAARLVKGGGRVV 396 Query: 372 YATCSVLPEENSLQIKAFL------------QRTADAELCETGTPEQPGKQNLPGAEEGD 419 YATCSVL EN ++ FL + AD ++ G P+ P + D Sbjct: 397 YATCSVLEAENEQIVRDFLAAHPNFRLVPAAEVLADQKIEVPGLPDNGMFALYPHLHQTD 456 Query: 420 GFFYAKL 426 GFF A L Sbjct: 457 GFFAAVL 463 >UniRef50_Q16QI0 Ribosomal RNA small subunit methyltransferase b (Sun) n=2 Tax=Culicini RepID=Q16QI0_AEDAE Length = 812 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/313 (32%), Positives = 150/313 (47%), Gaps = 31/313 (9%) Query: 143 YLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFP 201 Y + + ++ L K + P + +EA+ + P+ +R N R L G+ P Sbjct: 308 YSYNEFFMQLLLKLFSPNELLEFLEASEVQRPLTIRTNSLKTRRRDLAQALINRGVNLDP 367 Query: 202 HADYPDA--VRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGG 259 + V + P+ A P + G +Q AS+ + L P+ E ILDLCAAPGG Sbjct: 368 IGKWSKEGLVVYTSQVPLGATPEYLAGHYMIQGASSMLPVIALGPEENERILDLCAAPGG 427 Query: 260 KTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKRLGMK-ATVKQGDG-RYPSQWCGEQQF 316 K++HI + V+ A D+++ RL V N RLG++ A V DG +Y G F Sbjct: 428 KSSHIAALMKNTGVLFANDVNKDRLQAVVGNFHRLGIQNAIVTSIDGTKYRDVMTG---F 484 Query: 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL----DAIWPHLKTGGTLVY 372 DR+LLDAPC+ +GVI + P +K + D DI LQ ++L D + + +TGG LVY Sbjct: 485 DRVLLDAPCTGSGVISKDPSVKTTKTDVDIQRCYNLQRKLLLTAIDCLSANSETGGYLVY 544 Query: 373 ATCSVLPEENSLQIKAFLQRTADAELCETGTP-EQPGKQNLPGAE--------------- 416 +TCS+LP+EN + L R + L TG G N G + Sbjct: 545 STCSILPQENEWVVDYAL-RKRNVRLVSTGLDFGNEGFVNFAGQKYHPSMKLTRRFYPHT 603 Query: 417 -EGDGFFYAKLIK 428 DGFF AKL K Sbjct: 604 FNMDGFFVAKLQK 616 >UniRef50_Q11YN8 tRNA/rRNA cytosine-C5-methylase (Sun family protein) n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YN8_CYTH3 Length = 416 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 147/289 (50%), Gaps = 17/289 (5%) Query: 146 PSWL----LKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFP 201 P W+ +K L K E W+ + +N +++R+N H+ + L+ G++ Sbjct: 140 PDWMDALGVKELGK---ELWERELHFSNLEADVFIRVNTLKHTSAEIIKQLNAEGIEATQ 196 Query: 202 HADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKT 261 YP+ ++L P+ L + +G +QD+ +Q +L P ++D CA GGKT Sbjct: 197 FGPYPETLKLAERKPLQRLHSYLNGGYEIQDSGSQVIAHYLKPSPNAFVIDACAGAGGKT 256 Query: 262 THILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRIL 320 H+ + + ++V++DI+ +L + +R G ++ R + + D +L Sbjct: 257 LHLSALMGNKGKIVSMDIEAFKLKELERRAERAGT-TIIQTKVIREGVITSLKNKADYLL 315 Query: 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE 380 LD PCS GV+RR+PD KW I EL Q+Q +IL +K GG LVYATCS+LP Sbjct: 316 LDVPCSGIGVLRRNPDDKWKLSAERIQELTQIQQQILQEYSSMVKPGGVLVYATCSILPI 375 Query: 381 ENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 EN QI+ FL+ +L KQ + +E GDG+F A+LIKK Sbjct: 376 ENDNQIEQFLKSNTGFQL--------EKKQTIYPSEGGDGYFMARLIKK 416 >UniRef50_Q0FEH7 Ribosomal RNA small subunit methyltransferase B, putative n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FEH7_9RHOB Length = 430 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 117/407 (28%), Positives = 187/407 (45%), Gaps = 44/407 (10%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAAL 99 ++A Q L LR L +D+++ K + + + ++ V ++L I HAA Sbjct: 44 ERARAQSLAMTTLRNLGPIDFVLQKYLTKQTP---FALLNILRVSAAEMLVDGIAAHAA- 99 Query: 100 AETVEGAIAI-----KRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQ 154 V+ A+ + K LK L N VLR+ + ++ + S + K + Sbjct: 100 ---VDSAVTMAKRRHKTAHLKDLANAVLRKVASEGMDIFEGLEPQELPKAFRSQMAKIVT 156 Query: 155 KAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP 214 K E+ SI ++ P+ L + A ++ + P+ +VRL+ Sbjct: 157 K---EEMTSIERSHQAGAPVDLSFKDIKKAN----AFIENSNGIMMPNG----SVRLKRA 205 Query: 215 APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV 274 + + GF DG VQD +A +G+ +LDLCAAPGGKT + + A V Sbjct: 206 GQITEMNGFLDGDWWVQDLAASIPAKCFGDLSGKKVLDLCAAPGGKTMQLASMG--ATVT 263 Query: 275 AVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH 334 A+DI +RL RV NL+R +KA D +W ++FD ILLDAPCSA+G IRRH Sbjct: 264 ALDISSKRLERVKQNLERTKLKANCIAADAL---KWKPVERFDAILLDAPCSASGTIRRH 320 Query: 335 PDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 PD+ + + + D+ EL +LQ +L L GG L+Y+TCS+ E Q++ ++ Sbjct: 321 PDLPFAKENFDLGELLKLQRALLLKASNWLVPGGILIYSTCSIFSAEGEGQVQWLAKQNN 380 Query: 395 DAELCETGTPEQPGKQNLPGAEEG---------------DGFFYAKL 426 D + + P+ G + ++G DGFF AK Sbjct: 381 DL-IPQKIDPKLIGLSDYMANKDGQIRLRPDFFADLGGMDGFFVAKF 426 >UniRef50_D2L7S0 NusB/RsmB/TIM44 n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7S0_9DELT Length = 451 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 121/389 (31%), Positives = 180/389 (46%), Gaps = 31/389 (7%) Query: 39 KDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHA 97 +D+ L EL +G LR ++DW++++ + +P V ++ + +Y++LY +R+P +A Sbjct: 58 RDRGLATELVYGYLRLCGRIDWMLSRFLKKP-EAVPLPVRRVLGLAVYEILYCSRVPAYA 116 Query: 98 ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELL-AEFNASD----ARYLH-----PS 147 ++ V + L G+ N VLR+ + L EF D A YL P Sbjct: 117 SVDWAVSAVRRLSGKGLGGMANAVLRRVAADPKALDDPEFYCPDRCDEATYLSRYYSCPE 176 Query: 148 WLLKR-LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDE-AGMKGFPHADY 205 W++ L+ P + + A + P+ LR+NR SR AL D A + G AD+ Sbjct: 177 WIVGLWLRDFGPTDTRLYLAAQVEAAPLGLRVNR---SRPDARALFDALAALPGVRLADF 233 Query: 206 PD-AVRLET---PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN-GEHILDLCAAPGGK 260 P AV T A V +G ++ Q A AQ ++ L + E + D CA GGK Sbjct: 234 PTLAVPAGTDLAAAGVDMGAALAEGRLSRQSAGAQQILSRLGLADWPEPVFDACAGRGGK 293 Query: 261 TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDR 318 + E +V A D+ +L+ + RLG+ A + R P Sbjct: 294 ALFLAEAG--KRVFAGDMHATKLAGLRKETLRLGLPPVAAFRASATRMPLL----SPPGT 347 Query: 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 ILLDAPCS GV+ R PD KW R D+ L +LQ +L+A + L GG LVY TC+V Sbjct: 348 ILLDAPCSGLGVLSRRPDAKWRREPEDLAGLVRLQGAMLEAAYAALPPGGRLVYVTCTVN 407 Query: 379 PEENSLQIKAFLQRTADAELCETGTPEQP 407 P EN I R + L ET P P Sbjct: 408 PAENEQAIDRLGNRHRNL-LLETEAPVAP 435 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B2VK95 Ribosomal RNA small subunit methyltransferase B ... 585 e-165 UniRef50_B5FCW8 Ribosomal RNA small subunit methyltransferase B ... 561 e-158 UniRef50_Q2NQQ2 Ribosomal RNA small subunit methyltransferase B ... 554 e-156 UniRef50_Q12TA7 Sun protein n=8 Tax=Gammaproteobacteria RepID=Q1... 514 e-144 UniRef50_Q31J86 Ribosomal RNA small subunit methyltransferase B ... 508 e-142 UniRef50_Q8EKR0 Ribosomal RNA small subunit methyltransferase B ... 496 e-139 UniRef50_A5D1B7 tRNA and rRNA cytosine-C5-methylases n=6 Tax=Clo... 488 e-136 UniRef50_C6D4F5 Sun protein n=87 Tax=Bacilli RepID=C6D4F5_PAESJ 486 e-136 UniRef50_A3DCX8 Sun protein n=5 Tax=Clostridium RepID=A3DCX8_CLOTH 486 e-136 UniRef50_A8FD39 rRNA SAM-dependent methyltransferase RmsB n=3 Ta... 485 e-135 UniRef50_A6VR79 Sun protein n=2 Tax=Marinomonas RepID=A6VR79_MARMS 484 e-135 UniRef50_B7KB91 Sun protein n=19 Tax=Cyanobacteria RepID=B7KB91_... 480 e-134 UniRef50_A4BK87 Putative uncharacterized protein n=1 Tax=Reineke... 476 e-133 UniRef50_Q2BQD6 Fmu, rRNA SAM-dependent methyltransferase n=1 Ta... 475 e-132 UniRef50_A1TWM9 Sun protein n=3 Tax=Marinobacter RepID=A1TWM9_MARAV 474 e-132 UniRef50_C0GIQ4 Sun protein n=1 Tax=Dethiobacter alkaliphilus AH... 474 e-132 UniRef50_Q2SQX3 Sun protein n=1 Tax=Hahella chejuensis KCTC 2396... 473 e-132 UniRef50_C6MTY9 Sun protein n=1 Tax=Geobacter sp. M18 RepID=C6MT... 471 e-131 UniRef50_A8MH88 Sun protein n=7 Tax=Clostridiaceae RepID=A8MH88_... 471 e-131 UniRef50_C4ZEV6 Sun protein n=4 Tax=Clostridiales RepID=C4ZEV6_E... 470 e-131 UniRef50_Q88B41 Ribosomal RNA small subunit methyltransferase B ... 469 e-130 UniRef50_P94464 Ribosomal RNA small subunit methyltransferase B ... 468 e-130 UniRef50_Q603G1 Sun protein n=1 Tax=Methylococcus capsulatus Rep... 468 e-130 UniRef50_D1RHX8 Ribosomal RNA small subunit methyltransferase B ... 467 e-130 UniRef50_D1KD39 Ribosomal RNA small subunit methyltransferase B ... 467 e-130 UniRef50_Q5ZSC6 rRNA methyltransferase (SUN protein) n=5 Tax=Gam... 465 e-129 UniRef50_C9RZP8 Sun protein n=5 Tax=Bacillales RepID=C9RZP8_GEOSY 464 e-129 UniRef50_B3PGY5 Ribosomal RNA small subunit methyltransferase B ... 464 e-129 UniRef50_B5JST2 Ribosomal RNA small subunit methyltransferase B ... 463 e-129 UniRef50_B9M341 Sun protein n=4 Tax=Geobacter RepID=B9M341_GEOSF 463 e-129 UniRef50_B1HQE5 Ribosomal RNA small subunit methyltransferase B ... 462 e-128 UniRef50_P72943 Ribosomal RNA small subunit methyltransferase B ... 458 e-127 UniRef50_A1WZH2 Sun protein n=1 Tax=Halorhodospira halophila SL1... 457 e-127 UniRef50_B0KA07 Sun protein n=11 Tax=Thermoanaerobacterales RepI... 457 e-127 UniRef50_P45679 Ribosomal RNA small subunit methyltransferase B ... 456 e-127 UniRef50_Q2RK22 Sun protein n=3 Tax=Clostridia RepID=Q2RK22_MOOTA 455 e-126 UniRef50_B0A9Y2 Putative uncharacterized protein n=2 Tax=Clostri... 455 e-126 UniRef50_UPI0001C335A0 ribosomal RNA small subunit methyltransfe... 454 e-126 UniRef50_Q2JK83 Ribosomal RNA small subunit methyltransferase B ... 454 e-126 UniRef50_A0Q113 Sun protein n=35 Tax=Clostridium RepID=A0Q113_CLONN 453 e-126 UniRef50_C0N5F9 Ribosomal RNA small subunit methyltransferase B ... 453 e-126 UniRef50_Q88RR3 Ribosomal RNA small subunit methyltransferase B ... 453 e-126 UniRef50_D1BMC4 Sun protein n=3 Tax=Veillonella RepID=D1BMC4_VEIPT 452 e-126 UniRef50_UPI0000E0DBE4 Putative Sun protein n=1 Tax=Rhodobactera... 452 e-125 UniRef50_A0LEK0 Sun protein n=1 Tax=Syntrophobacter fumaroxidans... 452 e-125 UniRef50_B8FS79 Sun protein n=2 Tax=Desulfitobacterium hafniense... 452 e-125 UniRef50_B1YIQ1 Sun protein n=2 Tax=Exiguobacterium RepID=B1YIQ1... 451 e-125 UniRef50_B8KLT3 Ribosomal RNA small subunit methyltransferase B ... 449 e-125 UniRef50_C0WD86 SUN protein n=1 Tax=Acidaminococcus sp. D21 RepI... 448 e-124 UniRef50_B4WR53 Ribosomal RNA small subunit methyltransferase B ... 447 e-124 UniRef50_C7RA09 Sun protein n=1 Tax=Kangiella koreensis DSM 1606... 447 e-124 UniRef50_C4V0R0 rRNA SAM-dependent methyltransferase RmsB n=1 Ta... 446 e-124 UniRef50_B2IXU2 Sun protein n=1 Tax=Nostoc punctiforme PCC 73102... 446 e-124 UniRef50_Q3AC21 Sun protein n=1 Tax=Carboxydothermus hydrogenofo... 445 e-123 UniRef50_B2A2K5 Sun protein n=1 Tax=Natranaerobius thermophilus ... 445 e-123 UniRef50_A6NUS8 Putative uncharacterized protein n=1 Tax=Bactero... 445 e-123 UniRef50_B8FHH2 Sun protein n=1 Tax=Desulfatibacillum alkenivora... 444 e-123 UniRef50_Q3A7Z0 Sun protein n=2 Tax=Desulfuromonadales RepID=Q3A... 442 e-122 UniRef50_B9ZKR1 Sun protein n=2 Tax=Chromatiales RepID=B9ZKR1_9GAMM 441 e-122 UniRef50_A1AVP0 Sun protein n=1 Tax=Candidatus Ruthia magnifica ... 440 e-122 UniRef50_C9LLK5 Ribosomal RNA small subunit methyltransferase B ... 440 e-122 UniRef50_D2RNU3 Sun protein n=3 Tax=Veillonellaceae RepID=D2RNU3... 438 e-121 UniRef50_Q2LRX5 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Syn... 437 e-121 UniRef50_A8PKU4 Ribosomal RNA small subunit methyltransferase B ... 435 e-120 UniRef50_A3MAA2 16S rRNA m5C967 SAM-dependent methyltransferase ... 435 e-120 UniRef50_B8CWT0 Sun protein n=1 Tax=Halothermothrix orenii H 168... 434 e-120 UniRef50_A8ZUK3 Sun protein n=1 Tax=Desulfococcus oleovorans Hxd... 433 e-120 UniRef50_A7VUU4 Putative uncharacterized protein n=1 Tax=Clostri... 432 e-120 UniRef50_A4BP82 Fmu, rRNA SAM-dependent methyltransferase n=1 Ta... 432 e-119 UniRef50_Q87AR1 Ribosomal RNA small subunit methyltransferase B ... 432 e-119 UniRef50_B3WEW8 RRNA methylase (Putative) n=77 Tax=Bacilli RepID... 431 e-119 UniRef50_D0BMY2 Ribosomal RNA small subunit methyltransferase B ... 429 e-119 UniRef50_Q0AXL7 Putative uncharacterized protein n=1 Tax=Syntrop... 428 e-118 UniRef50_A8RWU3 Putative uncharacterized protein n=4 Tax=Clostri... 428 e-118 UniRef50_C0QI57 RsmB n=1 Tax=Desulfobacterium autotrophicum HRM2... 427 e-118 UniRef50_C0EFK3 Putative uncharacterized protein n=1 Tax=Clostri... 427 e-118 UniRef50_A5GRG8 Ribosomal RNA small subunit methyltransferase B ... 426 e-118 UniRef50_Q7A601 SA1060 protein n=63 Tax=Staphylococcaceae RepID=... 426 e-118 UniRef50_C9L6W4 Ribosomal RNA small subunit methyltransferase B ... 426 e-118 UniRef50_A0Z2Z6 Sun protein n=2 Tax=unclassified Gammaproteobact... 425 e-117 UniRef50_C5EIZ3 Putative uncharacterized protein n=2 Tax=Clostri... 424 e-117 UniRef50_B3E3P1 Sun protein n=4 Tax=Desulfuromonadales RepID=B3E... 423 e-117 UniRef50_A5VKQ4 Sun protein n=14 Tax=Lactobacillus RepID=A5VKQ4_... 422 e-117 UniRef50_C6P2V1 Sun protein n=1 Tax=Sideroxydans lithotrophicus ... 421 e-116 UniRef50_A5KNU7 Putative uncharacterized protein n=4 Tax=Clostri... 418 e-115 UniRef50_UPI0001C36EDB sun protein n=1 Tax=Ruminococcus flavefac... 418 e-115 UniRef50_A8SLL0 Putative uncharacterized protein n=1 Tax=Parvimo... 416 e-115 UniRef50_A0LDW0 Sun protein n=2 Tax=cellular organisms RepID=A0L... 416 e-115 UniRef50_B5YF43 Ribosomal RNA small subunit methyltransferase B ... 416 e-115 UniRef50_A5EWM0 RRNA SAM-dependent methyltransferase, Fmu n=2 Ta... 416 e-115 UniRef50_Q0VTE3 tRNA and rRNA cytosine-C5-methylase, putative n=... 416 e-114 UniRef50_B0MPP7 Putative uncharacterized protein n=1 Tax=Eubacte... 416 e-114 UniRef50_B0MGA0 Putative uncharacterized protein n=2 Tax=Clostri... 415 e-114 UniRef50_C5RAE2 RNA methyltransferase n=3 Tax=Lactobacillales Re... 414 e-114 UniRef50_B9XT31 Sun protein n=1 Tax=bacterium Ellin514 RepID=B9X... 414 e-114 UniRef50_Q2YC21 Sun protein n=7 Tax=Betaproteobacteria RepID=Q2Y... 413 e-114 UniRef50_C3RII4 SUN protein n=10 Tax=Bacteria RepID=C3RII4_9MOLU 412 e-113 UniRef50_C4FT85 Putative uncharacterized protein n=1 Tax=Catonel... 412 e-113 UniRef50_Q03FY2 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Pedi... 411 e-113 UniRef50_Q1DCG5 Ribosomal RNA small subunit methyltransferase B ... 411 e-113 UniRef50_C0XM65 rRNA SAM-dependent methyltransferase RmsB n=3 Ta... 411 e-113 UniRef50_UPI0001BC34B4 sun protein n=1 Tax=Butyrivibrio crossotu... 411 e-113 UniRef50_D1VSE3 Ribosomal RNA small subunit methyltransferase B ... 406 e-111 UniRef50_A9KM96 Sun protein n=1 Tax=Clostridium phytofermentans ... 405 e-111 UniRef50_C8WW78 Sun protein n=2 Tax=Alicyclobacillus acidocaldar... 404 e-111 UniRef50_D0MH27 Sun protein n=1 Tax=Rhodothermus marinus DSM 425... 403 e-111 UniRef50_C5V0U6 Sun protein n=1 Tax=Gallionella ferruginea ES-2 ... 403 e-111 UniRef50_A1KRE7 SUN-family protein n=32 Tax=Neisseriaceae RepID=... 403 e-111 UniRef50_B3QZ49 Sun protein n=1 Tax=Chloroherpeton thalassium AT... 403 e-111 UniRef50_A4XL79 Sun protein n=2 Tax=Clostridia RepID=A4XL79_CALS8 401 e-110 UniRef50_A8RCQ7 Putative uncharacterized protein n=1 Tax=Eubacte... 400 e-110 UniRef50_C0EY63 Putative uncharacterized protein n=1 Tax=Eubacte... 399 e-109 UniRef50_B0VHI6 Putative 16S rRNA m5C967 methyltransferase, S-ad... 399 e-109 UniRef50_C4G2S0 Putative uncharacterized protein n=1 Tax=Abiotro... 398 e-109 UniRef50_UPI00016C38F9 Fmu, rRNA SAM-dependent methyltransferase... 398 e-109 UniRef50_B7J3C2 Sun protein n=2 Tax=Acidithiobacillus ferrooxida... 398 e-109 UniRef50_Q03W17 tRNA and rRNA cytosine-C5-methylase n=11 Tax=Lac... 397 e-109 UniRef50_D0KVS1 Sun protein n=1 Tax=Halothiobacillus neapolitanu... 397 e-109 UniRef50_A8ST69 Putative uncharacterized protein n=2 Tax=Clostri... 397 e-109 UniRef50_Q1Q7P9 Putative uncharacterized protein n=1 Tax=Candida... 397 e-109 UniRef50_A8G3E0 Sun protein (Fmu protein) n=7 Tax=Prochlorococcu... 396 e-109 UniRef50_D1PM68 Ribosomal RNA small subunit methyltransferase B ... 396 e-108 UniRef50_B9K874 Sun protein n=6 Tax=Thermotogaceae RepID=B9K874_... 396 e-108 UniRef50_D2UG22 Putative trna and rrna cytosine-c5-methylase pro... 395 e-108 UniRef50_UPI0001BC65B2 16S rRNA m(5)C 967 methyltransferase n=2 ... 395 e-108 UniRef50_B9QVY4 Ribosomal RNA small subunit methyltransferase B ... 394 e-108 UniRef50_B4CZF1 Sun protein n=1 Tax=Chthoniobacter flavus Ellin4... 392 e-107 UniRef50_C5WIG1 16S rRNA m(5)C 967 methyltransferase n=44 Tax=St... 391 e-107 UniRef50_B1C5S4 Putative uncharacterized protein n=1 Tax=Anaerof... 391 e-107 UniRef50_B0PFT6 Putative uncharacterized protein n=1 Tax=Anaerot... 390 e-107 UniRef50_Q6AS22 Related to SUN protein (FMU protein) n=1 Tax=Des... 388 e-106 UniRef50_B9Y7F7 Putative uncharacterized protein n=1 Tax=Holdema... 387 e-106 UniRef50_B2SFT3 tRNA and rRNA cytosine-C5-methylase, sun protein... 385 e-105 UniRef50_B6JAF7 SUN protein n=6 Tax=Alphaproteobacteria RepID=B6... 384 e-105 UniRef50_A6BZY6 Sun protein n=1 Tax=Planctomyces maris DSM 8797 ... 384 e-105 UniRef50_C8PZ41 Ribosomal RNA small subunit methyltransferase B ... 384 e-105 UniRef50_C7RGU2 Fmu (Sun) domain protein n=4 Tax=Anaerococcus Re... 384 e-105 UniRef50_C7H5H8 Ribosomal RNA small subunit methyltransferase B ... 383 e-105 UniRef50_Q2S463 Ribosomal RNA small subunit methyltransferase B ... 383 e-105 UniRef50_Q1IIS1 Sun protein n=1 Tax=Candidatus Koribacter versat... 382 e-105 UniRef50_Q651X9 Os09g0477900 protein n=3 Tax=Magnoliophyta RepID... 382 e-104 UniRef50_C8R080 Sun protein n=1 Tax=Desulfurivibrio alkaliphilus... 381 e-104 UniRef50_A8YVW1 rRNA methylase n=27 Tax=Lactobacillus RepID=A8YV... 380 e-104 UniRef50_B7CB38 Putative uncharacterized protein n=1 Tax=Eubacte... 379 e-103 UniRef50_C3WQ58 16S rRNA m(5)C 967 methyltransferase n=15 Tax=Fu... 378 e-103 UniRef50_C5X355 Putative uncharacterized protein Sb02g027560 n=1... 378 e-103 UniRef50_A4U1B3 Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p:Antite... 377 e-103 UniRef50_UPI000174635C RsmB n=1 Tax=Verrucomicrobium spinosum DS... 377 e-103 UniRef50_B9GFY0 Predicted protein n=6 Tax=Spermatophyta RepID=B9... 377 e-103 UniRef50_Q1NQ57 Fmu, rRNA SAM-dependent methyltransferase n=2 Ta... 376 e-103 UniRef50_UPI0000E87C3C sun; rRNA methylase n=1 Tax=Methylophilal... 376 e-102 UniRef50_Q14PA1 Putative ribosomal rna small subunit methyltrans... 375 e-102 UniRef50_B3EF03 Sun protein n=11 Tax=Chlorobiaceae RepID=B3EF03_... 374 e-102 UniRef50_C1A605 Putative rRNA methyltransferase n=1 Tax=Gemmatim... 374 e-102 UniRef50_Q5P4P8 tRNA and rRNA cytosine-C5-methylases sun n=8 Tax... 373 e-102 UniRef50_A7IBA4 Sun protein n=6 Tax=Rhizobiales RepID=A7IBA4_XANP2 373 e-102 UniRef50_Q21DD2 Fmu (Sun) n=13 Tax=Rhizobiales RepID=Q21DD2_RHOPB 372 e-101 UniRef50_D0WMY6 Ribosomal RNA small subunit methyltransferase B ... 367 e-100 UniRef50_C6NTF2 Ribosomal RNA small subunit methyltransferase B ... 365 1e-99 UniRef50_C5NYN0 Ribosomal RNA small subunit methyltransferase B ... 365 2e-99 UniRef50_C1ZLP1 Ribosomal RNA small subunit methyltransferase Rs... 363 7e-99 UniRef50_D0LLT9 Sun protein n=1 Tax=Haliangium ochraceum DSM 143... 362 1e-98 UniRef50_A5WI31 Fmu (Sun) domain protein n=3 Tax=Psychrobacter R... 362 2e-98 UniRef50_Q9LK54 Similarity to SUN and FMU proteins n=3 Tax=Embry... 362 2e-98 UniRef50_C6XRR6 Fmu (Sun) domain protein n=1 Tax=Hirschia baltic... 361 3e-98 UniRef50_B6BVG1 Sun protein n=1 Tax=beta proteobacterium KB13 Re... 361 3e-98 UniRef50_Q8TGY3 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 359 1e-97 UniRef50_A3UKE9 RRNA methyltransferase RsmB n=1 Tax=Oceanicaulis... 359 1e-97 UniRef50_C7GZX3 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Eub... 359 2e-97 UniRef50_C2HH21 Possible rRNA SAM-dependent methyltransferase Rm... 357 3e-97 UniRef50_Q2T2A8 Sun protein n=76 Tax=Proteobacteria RepID=Q2T2A8... 357 6e-97 UniRef50_Q2WB24 tRNA and rRNA cytosine-C5-methylase n=3 Tax=Alph... 356 7e-97 UniRef50_C7I4U3 Sun protein n=1 Tax=Thiomonas intermedia K12 Rep... 356 1e-96 UniRef50_Q2SSR7 RRNA methyltransferase RsmB (Sun protein), putat... 356 1e-96 UniRef50_B3R820 16S rRNA m5C967 methyltransferase, S-adenosyl-L-... 355 2e-96 UniRef50_A3VQU7 TRNA and rRNA cytosine-C5-methylase-like protein... 354 3e-96 UniRef50_Q9V089 Sun/NOL1/NOP nucleolar protein n=3 Tax=Pyrococcu... 352 1e-95 UniRef50_C8NZ84 rRNA methylase n=1 Tax=Erysipelothrix rhusiopath... 351 3e-95 UniRef50_A7IDU9 Fmu (Sun) domain protein n=2 Tax=Xanthobacterace... 351 3e-95 UniRef50_B5YIL4 Sun protein n=1 Tax=Thermodesulfovibrio yellowst... 350 5e-95 UniRef50_B2UP28 Sun protein n=1 Tax=Akkermansia muciniphila ATCC... 350 5e-95 UniRef50_A9IZD6 SUN-family protein n=5 Tax=Bartonella RepID=A9IZ... 349 1e-94 UniRef50_Q0G330 Putative uncharacterized protein n=5 Tax=Rhizobi... 348 2e-94 UniRef50_C5A6U4 SAM-dependent tRNA/rRNA cytosine-C5 methylase n=... 348 3e-94 UniRef50_Q8TGZ8 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 347 3e-94 UniRef50_B6W6K6 Putative uncharacterized protein n=1 Tax=Anaeroc... 347 4e-94 UniRef50_A6UED5 Fmu (Sun) domain protein n=14 Tax=Rhizobiales Re... 347 4e-94 UniRef50_D1AKD9 Fmu (Sun) domain protein n=4 Tax=Fusobacteriacea... 346 7e-94 UniRef50_D2MQI4 Putative ribosomal RNA small subunit methyltrans... 346 7e-94 UniRef50_C6R1D5 Ribosomal RNA small subunit methyltransferase B ... 346 8e-94 UniRef50_C5SHX2 Sun protein n=1 Tax=Asticcacaulis excentricus CB... 346 9e-94 UniRef50_A2BK62 tRNA and rRNA cytosine-C5-methylase n=12 Tax=Arc... 346 9e-94 UniRef50_D2NSI1 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Micr... 346 1e-93 UniRef50_Q8TGY2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 346 1e-93 UniRef50_A4T0M4 Sun protein n=2 Tax=Polynucleobacter necessarius... 345 2e-93 UniRef50_C2BWI2 Ribosomal RNA small subunit methyltransferase B ... 345 2e-93 UniRef50_B6IQ69 tRNA and rRNA cytosine-C5-methylase, putative n=... 344 4e-93 UniRef50_B9JUI9 Sun protein n=44 Tax=Rhizobiales RepID=B9JUI9_AGRVS 342 1e-92 UniRef50_Q2RN41 tRNA and rRNA cytosine-C5-methylase n=1 Tax=Rhod... 342 1e-92 UniRef50_C1F543 Putative ribosomal RNA small subunit methyltrans... 342 2e-92 UniRef50_B4RCX9 rRNA methyltransferase RsmB n=8 Tax=Alphaproteob... 342 2e-92 UniRef50_C9RK88 Fmu (Sun) domain protein n=1 Tax=Fibrobacter suc... 341 3e-92 UniRef50_A6GKY6 Putative uncharacterized protein n=1 Tax=Limnoba... 339 9e-92 UniRef50_A1WK57 Sun protein n=17 Tax=cellular organisms RepID=A1... 339 1e-91 UniRef50_P46087 Putative ribosomal RNA methyltransferase NOP2 n=... 339 1e-91 UniRef50_A6LN58 NusB/RsmB/TIM44 n=2 Tax=Thermosipho RepID=A6LN58... 338 3e-91 UniRef50_C6XFI6 Fmu (Sun) domain protein n=1 Tax=Candidatus Libe... 336 9e-91 UniRef50_C1TRU2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Dethiosu... 335 2e-90 UniRef50_C6QJ47 Sun protein n=1 Tax=Hyphomicrobium denitrificans... 335 3e-90 UniRef50_A7BCC1 Putative uncharacterized protein n=1 Tax=Actinom... 334 4e-90 UniRef50_Q0F395 Sun protein n=1 Tax=Mariprofundus ferrooxydans P... 332 1e-89 UniRef50_D0ME27 Fmu (Sun) domain protein n=1 Tax=Rhodothermus ma... 332 2e-89 UniRef50_D0GJC1 Putative ribosomal RNA small subunit methyltrans... 330 6e-89 UniRef50_P71675 Putative methyltransferase Rv1407/MT1451 n=56 Ta... 330 6e-89 UniRef50_C2KVE0 Possible rRNA (Cytosine-5-)-methyltransferase n=... 329 9e-89 UniRef50_Q16CE2 RRNA methyltransferase RsmB n=15 Tax=Rhodobacter... 329 1e-88 UniRef50_D2RG94 RNA methylase, NOL1/NOP2/sun family n=1 Tax=Arch... 329 1e-88 UniRef50_Q2RXU7 tRNA/rRNA cytosine-C5-methylase n=8 Tax=Alphapro... 329 1e-88 UniRef50_UPI0000ECD55E Putative RNA methyltransferase NOL1 (EC 2... 328 2e-88 UniRef50_Q8TGZ4 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 328 2e-88 UniRef50_Q0ADT5 Fmu (Sun) domain protein n=50 Tax=Betaproteobact... 327 4e-88 UniRef50_C4XT41 rRNA (Cytosine-C(5)-)-methyltransferase n=1 Tax=... 327 4e-88 UniRef50_C2GHU0 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Cor... 327 5e-88 UniRef50_D2RGI9 Fmu (Sun) domain protein n=2 Tax=Archaeoglobacea... 326 8e-88 UniRef50_UPI0001C31BDA sun protein n=1 Tax=Conexibacter woesei D... 326 8e-88 UniRef50_Q0AKI8 Fmu (Sun) domain protein n=1 Tax=Maricaulis mari... 325 1e-87 UniRef50_C7LUK3 Sun protein n=1 Tax=Desulfomicrobium baculatum D... 325 2e-87 UniRef50_C6BVK4 NusB/RsmB/TIM44 n=1 Tax=Desulfovibrio salexigens... 325 3e-87 UniRef50_Q1MPZ7 TRNA and rRNA cytosine-C5-methylases n=1 Tax=Law... 324 3e-87 UniRef50_C0W3L2 rRNA (Cytosine-C(5)-)-methyltransferase n=1 Tax=... 323 6e-87 UniRef50_C6WT60 Fmu (Sun) domain protein n=1 Tax=Methylotenera m... 323 9e-87 UniRef50_O27960 Fmu and fmv protein n=1 Tax=Archaeoglobus fulgid... 322 1e-86 UniRef50_A7HSA7 Fmu (Sun) domain protein n=1 Tax=Parvibaculum la... 322 2e-86 UniRef50_C0W1K3 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Act... 322 2e-86 UniRef50_C7N543 tRNA/rRNA cytosine-C5-methylase n=2 Tax=Slackia ... 322 2e-86 UniRef50_D1Y2M1 Fmu n=1 Tax=Pyramidobacter piscolens W5455 RepID... 322 2e-86 UniRef50_A6FYF2 Ribosomal RNA small subunit methyltransferase B ... 321 3e-86 UniRef50_A3TLN6 Putative RNA-binding Sun protein n=2 Tax=Actinob... 321 4e-86 UniRef50_A4IGA8 Si:dkey-91i17.1 protein (Fragment) n=21 Tax=Euka... 321 4e-86 UniRef50_Q0BWV2 Putative ribosomal RNA small subunit methyltrans... 320 6e-86 UniRef50_UPI000194B9ED PREDICTED: nucleolar protein 1, 120kDa n=... 320 8e-86 UniRef50_Q022D6 NusB/RsmB/TIM44 n=1 Tax=Candidatus Solibacter us... 319 1e-85 UniRef50_Q0BRA0 16S rRNA m(5)C 967 methyltransferase n=12 Tax=Ac... 318 2e-85 UniRef50_D2L7S0 NusB/RsmB/TIM44 n=1 Tax=Desulfovibrio sp. FW1012... 318 3e-85 UniRef50_Q6A8H0 TRNA/rRNA cytosine-C5-methylase n=3 Tax=Propioni... 317 4e-85 UniRef50_UPI00015B4FE9 PREDICTED: similar to CG8545-PA n=2 Tax=N... 317 4e-85 UniRef50_D2B6M0 Fmu, rRNA SAM-dependent methyltransferase:Nop2p ... 317 5e-85 UniRef50_A9LZZ8 SUN-family protein n=29 Tax=Betaproteobacteria R... 317 8e-85 UniRef50_Q16QI0 Ribosomal RNA small subunit methyltransferase b ... 316 8e-85 UniRef50_A9BNV4 Fmu (Sun) domain protein n=2 Tax=Comamonadaceae ... 316 1e-84 Sequences not found previously or not previously below threshold: >UniRef50_B2VK95 Ribosomal RNA small subunit methyltransferase B n=3 Tax=Erwinia RepID=RSMB_ERWT9 Length = 429 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 309/429 (72%), Positives = 365/429 (85%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MKK NLR +AAQ +E+VVEQGQSLSN+LP Q+ V DKD ALLQELC+GVLRTL QL+W Sbjct: 1 MKKMTNLRCIAAQTIEKVVEQGQSLSNVLPAAQKSVGDKDAALLQELCYGVLRTLPQLEW 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 +I +LM+RPMTGKQR VH+LIMVGLYQL++TRIP HAALAETVEGA+A+KRPQLKGLING Sbjct: 61 VIGRLMSRPMTGKQRAVHFLIMVGLYQLMFTRIPAHAALAETVEGAVALKRPQLKGLING 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLRQFQRQQ+EL+ + N D +YLHP WLL+RL++A+P QW+ IV+ANNQRPPMWLR+NR Sbjct: 121 VLRQFQRQQDELMQQMNDGDQQYLHPKWLLERLKRAWPAQWKQIVDANNQRPPMWLRVNR 180 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 HHSRD+WL LL+E+G + F H + DA+RLE+P V LPGF+ GW+TVQD SAQGC+ Sbjct: 181 QHHSRDAWLTLLEESGKQAFAHPQHGDALRLESPCAVGQLPGFDQGWITVQDVSAQGCVA 240 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 LAP++GE ILDLCAAPGGKTTHILE AP+A+V+AVD+D QRL+RV +NL+RL M+A VK Sbjct: 241 LLAPRDGEQILDLCAAPGGKTTHILEAAPQAKVMAVDVDAQRLARVSENLQRLTMQAEVK 300 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 QGDGR P+ WCG+ QFDRILLDAPCSATGVIRRHPDIKWLRRDRDI ELA LQ +ILDA+ Sbjct: 301 QGDGRTPAAWCGDTQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAALQQQILDAV 360 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 WPHLK GGTL+YATCSVLPEEN +QI FLQR ADA L ETG QPG Q P A+ GDG Sbjct: 361 WPHLKPGGTLLYATCSVLPEENHVQIGQFLQRHADATLIETGDLTQPGIQVFPQADGGDG 420 Query: 421 FFYAKLIKK 429 F+YAKL+K+ Sbjct: 421 FYYAKLVKQ 429 >UniRef50_B5FCW8 Ribosomal RNA small subunit methyltransferase B n=14 Tax=Gammaproteobacteria RepID=B5FCW8_VIBFM Length = 451 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 250/424 (58%), Positives = 316/424 (74%), Gaps = 1/424 (0%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N+R+ AA+ + QVV+QG SLS+ LP Q ++ +D+ALLQE+C+GVLR L +L+ + L Sbjct: 27 NVRAAAAKVIYQVVDQGHSLSSALPKAQSEIKPRDQALLQEICYGVLRFLPRLESVAQSL 86 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 M +P+ GKQR H+LI+VG+YQL + RIP HAA+AETVEG +K P+L+GLIN VLR + Sbjct: 87 MDKPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVAETVEGTKNLKGPKLRGLINAVLRNY 146 Query: 126 QRQQEELLAE-FNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QR QEEL A+ + +Y HP WLLK LQ+AYPEQW++IVEANN + PMWLR+N HH+ Sbjct: 147 QRSQEELDAKSVSHDSGKYGHPGWLLKMLQQAYPEQWETIVEANNSKAPMWLRVNSQHHT 206 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD ++ALL++ + PH+ DA+ L+ V+ LPGFE GWV+VQDA+AQ +L P Sbjct: 207 RDEYIALLEKEEISVTPHSQATDALLLDKARDVYTLPGFEQGWVSVQDAAAQLSAEYLQP 266 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 QNGE ILD CAAPGGKT HILE + VVA+D DE RL RVY+NL+RL +KA V GD Sbjct: 267 QNGELILDCCAAPGGKTAHILERTQDTNVVAIDCDETRLKRVYENLERLNLKAQVICGDA 326 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R+P +W +QFDRILLDAPCSATGVIRRHPDIKWLRR DI LA+LQSEI DA+W L Sbjct: 327 RHPEEWWKGEQFDRILLDAPCSATGVIRRHPDIKWLRRAEDIKALAELQSEIFDAMWLQL 386 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYA 424 K+GGT+VYATCS+ P EN Q+KAFL RT+DA L + PE+PG+Q LPG E DGF+YA Sbjct: 387 KSGGTMVYATCSITPLENCDQVKAFLARTSDATLIDNTDPEKPGRQILPGEENMDGFYYA 446 Query: 425 KLIK 428 L K Sbjct: 447 VLQK 450 >UniRef50_Q2NQQ2 Ribosomal RNA small subunit methyltransferase B n=264 Tax=Bacteria RepID=RSMB_SODGM Length = 433 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 291/428 (67%), Positives = 337/428 (78%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK NLR +AA+AV QV++QGQSL +LPPLQ +S+KD+ALLQELCFG++R L QL+W Sbjct: 1 MKTHYNLRVIAARAVAQVLDQGQSLGALLPPLQAPLSEKDRALLQELCFGIMRVLPQLEW 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L+ +LMA+P+TGKQR VHYL+MVGLYQL YTRIPPHAALAETVEGA+A+KRPQ KGLING Sbjct: 61 LLRQLMAKPLTGKQRPVHYLLMVGLYQLTYTRIPPHAALAETVEGAVAMKRPQFKGLING 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLRQFQRQQ LLA+ D R+LHPSWL KR+ A+P Q+ I++ANNQRPPMWLR+NR Sbjct: 121 VLRQFQRQQPALLADAERQDIRHLHPSWLQKRILAAWPAQYAQIIDANNQRPPMWLRVNR 180 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 HHSRD++LALL + H+ PDA+RLE P V LPGF+ GWVTVQDASAQGC Sbjct: 181 LHHSRDAYLALLAGTDIAAVAHSQLPDAIRLEMPCNVGRLPGFDRGWVTVQDASAQGCAL 240 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 LAPQN E ILDLCAAPGGKTTHILE+AP A+V+AVD+D QR +R++DNL+RLGM+A V Sbjct: 241 LLAPQNSETILDLCAAPGGKTTHILEIAPAARVMAVDVDGQRAARIHDNLQRLGMQAEVV 300 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 GDGR P W FDRILLDAPCSATGVIRRHPDIKWLRRD DI ELA+LQ +IL A Sbjct: 301 IGDGRTPDAWRSGMLFDRILLDAPCSATGVIRRHPDIKWLRRDGDIAELAELQRQILCAA 360 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 W LK GGTL+YATCS+LPEEN QI AFL DA L ETG PG Q LP GDG Sbjct: 361 WRVLKLGGTLLYATCSILPEENRGQIAAFLADHPDALLQETGDAAAPGLQCLPVPTSGDG 420 Query: 421 FFYAKLIK 428 FFYAK+IK Sbjct: 421 FFYAKMIK 428 >UniRef50_Q12TA7 Sun protein n=8 Tax=Gammaproteobacteria RepID=Q12TA7_SHEDO Length = 428 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 230/427 (53%), Positives = 290/427 (67%), Gaps = 7/427 (1%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINK 64 NLR++AA+A+ V+E+G SLS LP QQ V + KDKALL ELC+GV+R L QLD ++ Sbjct: 3 NLRALAAKAIFDVLEKGLSLSVALPLQQQHVQNGKDKALLAELCYGVMRQLPQLDKCVSD 62 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 +A+P GKQR +H L++VG YQL +TRIP HAA++ET E +K L ++NGVLR Sbjct: 63 CLAKPFKGKQRILHQLLLVGCYQLYFTRIPSHAAVSETAEACRQLKFDGLVKVVNGVLRN 122 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QRQ+ EL ++ +Y P+WL+KRLQ+AYP+ WQ ++E +++RPPMWLR NR + Sbjct: 123 IQRQEPEL--NTDSDTLKYNTPAWLIKRLQQAYPQDWQQVIEQSHERPPMWLRNNRLVQT 180 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD++LA L ++ PDA+ LE+P V LPGF G +VQD +AQ T LAP Sbjct: 181 RDAYLASLTNENIEASA-GLSPDAILLESPTDVLQLPGFMSGSASVQDGAAQWAATLLAP 239 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q E +LD CAAPGGKT H+LE+AP + AVD D +RL RV NL RL + A V GD Sbjct: 240 QANEVVLDACAAPGGKTCHLLEIAPNISLTAVDFDLKRLERVQQNLDRLKLTAQVIHGDA 299 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 W +FDRILLDAPCSATGVIRRHPDIKWLR++ DI ELA LQ +ILD W L Sbjct: 300 ANIDSWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKNSDIDELATLQMQILDHCWQWL 359 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC---ETGTPEQPGKQNLPGAEEGDGF 421 K GGTL+YATCS+LPEENS QI AFL RTADA L E P G Q LPG + DGF Sbjct: 360 KPGGTLLYATCSILPEENSQQINAFLTRTADASLVAISEQKNPADIGWQILPGQDNMDGF 419 Query: 422 FYAKLIK 428 +YA+L+K Sbjct: 420 YYARLVK 426 >UniRef50_Q31J86 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31J86_THICR Length = 436 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 194/433 (44%), Positives = 274/433 (63%), Gaps = 8/433 (1%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLI 62 N R +A + V+E G+SLS L + SD+ ++A Q L G LR +L+ + Sbjct: 2 AVNSRYIALKICLTVIEHGRSLSQSLAEGLAQFSDRRERAFTQNLVLGTLRWQERLEAIR 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + L+ +P+ K V+ LI++GLYQ+LY P HAA++ETV ++K+P +GLINGVL Sbjct: 62 SHLLKKPLKAKDEDVNQLILLGLYQILYMDTPEHAAVSETVNLTKSLKKPWARGLINGVL 121 Query: 123 RQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 R F R ++ + E + A RY HP W K ++ AYP+ W+ I+ ANN+ P+ LR+N Sbjct: 122 RTFLRDKDSICEEVDKKPAYRYSHPQWFTKTIRNAYPDHWEQILSANNEPAPLTLRVNPL 181 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 + +R+++LALL + ++ H P + L+ + LP +++G +VQDA+AQ Sbjct: 182 YQTREAFLALLSDQAVEADIHPKAPQGIVLKNSLDITQLPTYDEGGFSVQDAAAQQAAYL 241 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 LAPQ E ILD CAAPGGKTTH+LE++ +A+V A++ + +R+ R+ +NL RL + A ++ Sbjct: 242 LAPQPNEFILDACAAPGGKTTHLLELSDNQAKVFALEKEPERIERLSENLYRLALTAEIE 301 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 GD P QW E QFD+ILLDAPCSATG+IRRHPDIKW R DI L QLQ+ IL AI Sbjct: 302 VGDASQPDQWWPEIQFDKILLDAPCSATGIIRRHPDIKWHRTPEDITVLTQLQAAILQAI 361 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-----EQPGKQNLPGA 415 WP LK GG L+YATCSVLP+EN QI FLQ+T DA+ G + PG+Q LPG Sbjct: 362 WPRLKPGGKLLYATCSVLPQENRDQISQFLQQTPDAKEIPIGADWGITIDAPGRQILPGQ 421 Query: 416 EEGDGFFYAKLIK 428 + DGF+Y + K Sbjct: 422 DGMDGFYYCLIEK 434 >UniRef50_Q8EKR0 Ribosomal RNA small subunit methyltransferase B n=20 Tax=Gammaproteobacteria RepID=RSMB_SHEON Length = 428 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 221/427 (51%), Positives = 284/427 (66%), Gaps = 7/427 (1%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINK 64 NLR++AA+A+ V+E+G SLS LP Q+ + S KDKALL ELC+GV+RTL Q++ + Sbjct: 2 NLRALAAKAIFDVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRTAE 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 +A+P+ GKQR +H L++VG YQL +TRIP HAA++ET E +K + ++NGVLR Sbjct: 62 CLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLRN 121 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QRQ L E Y P WL+KRL+ AYP WQ I++ +++RPPMWLR NR S Sbjct: 122 IQRQLTPLSNESETLS--YNTPGWLIKRLKTAYPGNWQEIIQQSHERPPMWLRNNRLSQS 179 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD +LA LD+ + DA+ L P V LP F +G +VQD +AQ T LAP Sbjct: 180 RDEYLAALDKLEIDASA-GLSDDAILLAAPKDVATLPLFLEGAASVQDGAAQWAATLLAP 238 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q E ILD CAAPGGK+ H+LE+ P +++AVD D +RL RV NL RL +KA V GD Sbjct: 239 QANELILDACAAPGGKSCHLLELEPSIKLIAVDFDAKRLERVQQNLDRLSLKAEVIHGDA 298 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 W +QFDRILLDAPCSATGVIRRHPDIKWLR++ DI ELA+LQ +ILD W L Sbjct: 299 ANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWL 358 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAE---LCETGTPEQPGKQNLPGAEEGDGF 421 K GGTL+YATCS+LP+EN QI AFL RTADA+ L + + + G Q PG DGF Sbjct: 359 KPGGTLLYATCSILPQENRDQISAFLARTADAKLDTLVQQASSQDIGWQITPGQHNMDGF 418 Query: 422 FYAKLIK 428 +YA+L+K Sbjct: 419 YYARLLK 425 >UniRef50_A5D1B7 tRNA and rRNA cytosine-C5-methylases n=6 Tax=Clostridia RepID=A5D1B7_PELTS Length = 456 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 139/447 (31%), Positives = 222/447 (49%), Gaps = 24/447 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 + R +A + V V E+G + L + + D+A EL +G LR+L+ LDW++ Sbjct: 8 SARELALKVVNAVEEEGAYANLALNQVLEKHRPGKLDRAFATELAYGTLRSLNTLDWVLE 67 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + +P++ + RTV ++ +G+YQL++ R+PP A E E A +NGVL Sbjct: 68 QFIKQPLSSQSRTVLNILRLGVYQLMFMDRVPPSAVCNEGAELARKYGHAGTVKFVNGVL 127 Query: 123 RQFQRQQEELLAEFNASDA------RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 R R+ E+ D RY HP W++KR K + + ++ ANN P Sbjct: 128 RNISRRLNEISFPALEDDPVKHISLRYSHPVWMVKRWLKEFGLDHTVALCRANNGPAPNT 187 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R N +RD L G+ P+ ++++ + +L F++G +QD S+ Sbjct: 188 VRTNTLKITRDGLAERLRNEGLTVSETEFAPEGLKIDGFFSIGSLQSFKEGLFQIQDESS 247 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG 294 L P G ++D C+APGGKTTH+ ++ +++AVDI +L + +N RLG Sbjct: 248 MLAGRALMPAPGAFVIDACSAPGGKTTHLAQLMENRGRILAVDIHPHKLVLIKENCSRLG 307 Query: 295 MKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + GD R + + D IL+DAPCS GV+RR PD +W + +P + QLQ Sbjct: 308 INIVEGLAGDARELPENLY-NKADFILVDAPCSGLGVLRRRPDARWRKEPGQLPAIIQLQ 366 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-----------G 402 EIL+ + LK G +VY+TC++ EEN Q++ FL + L + G Sbjct: 367 REILEGVARCLKKNGVIVYSTCTITREENLRQVEWFLDKHPQFVLEDLSPFLPAGLDFEG 426 Query: 403 TPEQPGKQNLPGAEEGDGFFYAKLIKK 429 T + Q LP DGFF A++ KK Sbjct: 427 TLKGGFLQVLPYRHGMDGFFIARMRKK 453 >UniRef50_C6D4F5 Sun protein n=87 Tax=Bacilli RepID=C6D4F5_PAESJ Length = 491 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 148/456 (32%), Positives = 223/456 (48%), Gaps = 30/456 (6%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDW 60 + R R +A + +V E G + L + Q ++ D AL+ EL +G ++ LD Sbjct: 36 RVRTPRELALDTLVKVAETGAYSNLQLNRVLQEAQLQRADAALVTELVYGTIQRQLTLDH 95 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLIN 119 + K A+ + + VH L+ + YQLLY RIP HAA+ E V A + G++N Sbjct: 96 WLGKFAAKGLRKLEPWVHQLLRMSAYQLLYLDRIPAHAAVNEAVTIAKRRGHQGISGMVN 155 Query: 120 GVLRQFQRQQEELLAEFNAS-------DARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 G+LR R + EL + A RY +P WL++R KAY E ++I + N+ Sbjct: 156 GILRSIDRNRAELTVDAIADKNPVVQISVRYSYPEWLVERWVKAYGAETAEAICASGNEP 215 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P +R+N SR+ L+LL E G P + + + GF DG T+Q Sbjct: 216 PHASVRVNPLRSSRNEVLSLLTEQGGDAEASRLAPAGIVVRRGGNLADTEGFRDGLWTMQ 275 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 D S+ +AP+ G +LD CAAPGGKTTH+ E+ + +V A D+ + + D Sbjct: 276 DESSMLVAEVVAPKAGMQVLDCCAAPGGKTTHMAELMSGKGKVYANDLHPHKRQLIVDQA 335 Query: 291 KRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 RLG++ D + D +LLDAPCS GVIRR P+IKW + D+ E+ Sbjct: 336 VRLGLQNIEAITEDAGKLGERFAPASIDAVLLDAPCSGFGVIRRKPEIKWTKTAGDVAEI 395 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ--- 406 A +Q +L A+ +K GGTLVY+TC++ EN Q+ FL+ + +L + PE+ Sbjct: 396 AAIQRRLLGAVAGLVKPGGTLVYSTCTIESTENEEQVAVFLKEHPEFQL-DAEWPEEALA 454 Query: 407 -------------PGKQNLPGAEEGDGFFYAKLIKK 429 Q LP DGFF A+L ++ Sbjct: 455 PLREKGIIDSSFDGQAQLLPHHYGSDGFFIARLRRR 490 >UniRef50_A3DCX8 Sun protein n=5 Tax=Clostridium RepID=A3DCX8_CLOTH Length = 455 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 127/449 (28%), Positives = 220/449 (48%), Gaps = 21/449 (4%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLD 59 K +R A + + + E+G + L Q+ D+A + ++ +G L+ +D Sbjct: 5 TKVDKVRETALKILYDINEKGAYSNISLNKYLNGQEFESIDRAFITDIVYGTLKWQYTID 64 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 +LI K + + + ++ +G+YQL+Y +IP AA E+V+ A + Sbjct: 65 YLIEKFSSVKIKKISPWIFNILRMGIYQLIYTDKIPFFAACNESVKLAAKYGHAASSKYV 124 Query: 119 NGVLRQFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQR 171 N VLR R +E L +D +Y HP W++K + E+ + +++ANN+ Sbjct: 125 NAVLRNIARNKENLPYPDRNNDTAHYLSVKYSHPVWMVKDWLDCFGEEFTEGLLKANNEV 184 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P +R+N S+ + +L + G + +A+ + P+ V + F G+ VQ Sbjct: 185 APFTVRVNDLKISKKELVDILTKDGFEVENGKYLDEALIIRNPSAVQKMDAFAKGYFQVQ 244 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 D S+ L P+ GE ILD+C+APGGK+THI ++ V++ DI E ++ + Sbjct: 245 DESSMLVAKVLDPKPGETILDVCSAPGGKSTHIAQIMKNRGTVISRDIHEHKIKLIEQAK 304 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 +RLG++ + ++ DR+L+DAPC+ G+IRR PDIKW + D E+ Sbjct: 305 ERLGLEIIKTEVFDAAVLDGKLIEKIDRVLVDAPCTGFGIIRRKPDIKWSKNSEDKAEIV 364 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-------- 402 LQ +IL ++K GG LVY+TC++ PEEN ++ F++ D L + Sbjct: 365 SLQHKILSTASKYVKDGGVLVYSTCTLEPEENEKAVERFIEENKDFYLEDITEFLPDALR 424 Query: 403 --TPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + + Q P + DGFF A++ K+ Sbjct: 425 KESAGKGYIQLYPNIDGIDGFFIARMRKR 453 >UniRef50_A8FD39 rRNA SAM-dependent methyltransferase RmsB n=3 Tax=Bacillaceae RepID=A8FD39_BACP2 Length = 447 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 159/450 (35%), Positives = 231/450 (51%), Gaps = 25/450 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQ 57 MKK N+R +A A+ + +EQ Q+ SN+L + ++D+DK LL EL +G L+ Sbjct: 1 MKKS-NVREVALDALIK-LEQNQAYSNLLLQSVMKDKDLADQDKPLLTELVYGTLQNKLA 58 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKG 116 LD+++ + +P V L+ + LYQ++Y +IP AA+ E VE + Sbjct: 59 LDYMLAPFVKKP-QKVAPWVMQLLRMSLYQMVYLEKIPDRAAIHEAVELTKKRGHKGISS 117 Query: 117 LINGVLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 L+NGVLR QR+ +++ HP WL++ ++Y E +S+ + Sbjct: 118 LVNGVLRSVQREGVPAFDDIKDPVKRLSIETSHPLWLVQEWVQSYGFEATESMCRIHLVP 177 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P LR+NR R + L +AG++ DA++L + + P F++G+VT+Q Sbjct: 178 PKQTLRVNRIKTDRAALKQKLLDAGIETELGDLSEDALKL-MKGSIVSTPSFQEGYVTIQ 236 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNL 290 D S+ L PQ GE +LD CAAPGGK+THI E + Q+V++D+ E ++ + Sbjct: 237 DESSMLVARALDPQPGETVLDACAAPGGKSTHIAERMNDEGQIVSLDLHEHKVKLIKQAA 296 Query: 291 KRLGMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 KRL + K D R E FDRIL+DAPCS GVIRR PD+K+ + D L Sbjct: 297 KRLNLTQIEAKALDARKAKDDYSEASFDRILIDAPCSGFGVIRRKPDMKYTKSPEDSARL 356 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE--------LCET 401 A +Q IL P LK GGTLVY+TC++ P EN I AFLQ D E L E Sbjct: 357 AIIQQAILKETAPLLKPGGTLVYSTCTMDPSENQQVIHAFLQEHQDFEPDLSLNERLPEQ 416 Query: 402 GTP--EQPGKQNLPGAEEGDGFFYAKLIKK 429 P + Q LP DGFF + KK Sbjct: 417 VAPFVQNGSVQILPHYFGTDGFFICSMRKK 446 >UniRef50_A6VR79 Sun protein n=2 Tax=Marinomonas RepID=A6VR79_MARMS Length = 462 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 171/442 (38%), Positives = 255/442 (57%), Gaps = 17/442 (3%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 Q++ R +A + + ++ Q SLS L Q V+ + +L+ELCFGV R +L+ + Sbjct: 20 QQSARQVAIKVITNILLQQGSLSTQLARHQLDVASEHAPMLKELCFGVCRQYPRLNSIAL 79 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+A P K ++ ++++GLYQL Y P HAA+ ETVE + + L+N VLR Sbjct: 80 HLLAHPFEEKDTDLYAVLLLGLYQLTYMNTPDHAAVNETVEACRILNKDWATKLMNAVLR 139 Query: 124 QFQRQQEELLAEFNA-SDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 ++QR+ ++++ A + P WL+KR K +PE + I+EA+N PPM +R+N + Sbjct: 140 RYQREADDIVEILEAQPSVEFNMPKWLVKRFNKHWPEHLEEIIEASNTHPPMCIRVNESL 199 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 SR+++ L + G+ A+ L+ V LPGF+DG+V+VQD +AQ L Sbjct: 200 VSRETYKEQLLDLGINTEKGEFSDSALYLKNAVRVGELPGFDDGYVSVQDEAAQLSAHIL 259 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEA-----QVVAVDIDEQRLSRVYDNLKRLGMKA 297 +P+ GE +LD CAAPGGKT H+LE A A ++ AV+++ R+ ++ NL+RLG A Sbjct: 260 SPKAGEKVLDACAAPGGKTGHLLEKANSAGLSSMELTAVELESWRMEKIESNLERLGYSA 319 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + D W + FD+ILLD PC+ATGVIRR+PDIK R+ DI +L +Q EIL Sbjct: 320 QLICADASDLDAWWDGEHFDKILLDVPCTATGVIRRNPDIKINRKPADIDDLVIIQREIL 379 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE-----------LCETGTPEQ 406 + +W LK+GG ++YATCS++PEEN QI+ FL DA+ E G P Sbjct: 380 NKVWTTLKSGGFMLYATCSLMPEENEQQIQHFLANQEDAKEVALNSLAADLAVEWGIPVS 439 Query: 407 PGKQNLPGAEEGDGFFYAKLIK 428 G+Q P A DGF+Y L K Sbjct: 440 HGRQLFPQANGHDGFYYCLLQK 461 >UniRef50_B7KB91 Sun protein n=19 Tax=Cyanobacteria RepID=B7KB91_CYAP7 Length = 452 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 144/448 (32%), Positives = 230/448 (51%), Gaps = 24/448 (5%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDW 60 K++N R +A + + ++ L ++ + + D+ L+ EL +G++R LD Sbjct: 4 KEKNPRQLALIILRDIYQKEAYTDLALDQGIKRADLGNLDRGLVTELVYGIVRRQRTLDE 63 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLIN 119 +I++L + + + ++ +GLYQL Y IPP AA+ +VE A K +L G++N Sbjct: 64 IISQLGTKKANQQPPDLRLILHIGLYQLRYLDQIPPSAAVNTSVELAKKNKLGKLSGVVN 123 Query: 120 GVLRQFQRQQEELLAEFNASD-------ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 G+LRQ+ R +E+ + P+W+++ + EQ + + E NQ Sbjct: 124 GILRQYDRIKEQGKDPLKFPSDPVNHLGVLHSFPNWIIQLWLDEFGQEQTEQLCEWFNQP 183 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP-APVHALPGFEDGWVTV 230 + +R+N + + ++ + G+K P P ++RL + LPGFE+GW TV Sbjct: 184 AMIDIRVNLLKTTVEKVASIFSDVGVKVKPIPHLPQSLRLIGGTRSIQQLPGFEEGWWTV 243 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDN 289 QD+SAQ L PQ E I+D CAAPGGKTTHI ++ + A D RL +V N Sbjct: 244 QDSSAQLVTHLLDPQPDEIIIDACAAPGGKTTHIAQLMGDRGTIWACDRVPSRLRKVQQN 303 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 +RL + + + +GD R+ +Q+ + DR+LLDAPCS G + + PDI+W + I E Sbjct: 304 AERLQLNSIRICEGDSRHLTQF--RETADRVLLDAPCSGLGTLHKRPDIRWRQTPEKIAE 361 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL--------CE 400 L+QLQ+E+L+ +K G LVYATC++ P EN I AFL R + Sbjct: 362 LSQLQTELLEETATWVKPKGILVYATCTLNPLENERVIAAFLDRHPSWHIQTPSSDNTVA 421 Query: 401 TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + LP + DGFF KL+K Sbjct: 422 AFATPSGWIKVLPHQHQMDGFFMVKLVK 449 >UniRef50_A4BK87 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BK87_9GAMM Length = 427 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 274/428 (64%), Gaps = 8/428 (1%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R +AA+ + QVV++G+SL++ LP + + +A LQ+L +G R LD LIN L Sbjct: 3 NTRLIAAEILLQVVDEGRSLNDELPRRLKHIDPDQQAFLQQLVYGSTRYYFALDELINLL 62 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + +P+ GK+R VH L+ +GLYQL + + HAA+ ETVE + K+ K L+N LR+F Sbjct: 63 VEKPIRGKERLVHMLLAIGLYQLWHLDVAEHAAINETVEATLTAKKQWAKNLVNASLRRF 122 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 QR++E +L + ++ P WL KRL++AYPEQ+ I +NQ PM LRINR +R Sbjct: 123 QRERETILPQLRRTE---SFPGWLNKRLRQAYPEQFADICVQSNQPGPMTLRINRRMMTR 179 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 ++WL L + G+ P L +PAPV ALPGFEDG ++VQD +AQ C T L Sbjct: 180 EAWLLLAIKEGLVAHSTNHSPVGATLASPAPVLALPGFEDGALSVQDEAAQMCATLLPVT 239 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 +G+ +LD C+APGGKT H+LE A + ++VA+DIDE RL RV +NL+R+G+ A + D Sbjct: 240 DGQRVLDACSAPGGKTGHLLEKA-DIELVAIDIDEHRLGRVQENLERIGVSAELIAEDAA 298 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 +W FD +LLDAPCS TGVIRRHPDIK LR+ DI L+Q+QS +LD +W +K Sbjct: 299 EIERWWDGVPFDAVLLDAPCSGTGVIRRHPDIKLLRKSADIKALSQVQSRLLDRLWGTVK 358 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTADAE----LCETGTPEQPGKQNLPGAEEGDGF 421 GG L+YATCSVLP+EN+ +I AFLQ +A+ + + G Q LP ++ DGF Sbjct: 359 PGGYLLYATCSVLPDENTDRIAAFLQAHPEAQEQPLALQADVDTEHGVQWLPQSDGHDGF 418 Query: 422 FYAKLIKK 429 +YA L K+ Sbjct: 419 YYALLKKQ 426 >UniRef50_Q2BQD6 Fmu, rRNA SAM-dependent methyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQD6_9GAMM Length = 432 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 184/431 (42%), Positives = 268/431 (62%), Gaps = 8/431 (1%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 +N+R++AAQA+ +++ SL+ P ++++ +DKD+ LL+ELC+G LR QL+ ++ Sbjct: 2 TKNIRTLAAQALTPLLQNKGSLNTKYPAIERRCADKDRGLLRELCYGTLRYYPQLNRVLQ 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L RP K V L +VGLYQ+ +TRIP HAA+ ETVE + +P L+N +LR Sbjct: 62 LLQNRPFKYKDIDVRALALVGLYQIQHTRIPAHAAIHETVEACKELNKPGAAKLLNAILR 121 Query: 124 QFQRQQEELLAEFNASDAR-YLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 +FQR+Q+++ +E D+ Y H W++ +L+ +P+ WQ+I+EANN++ P+ LR+NR Sbjct: 122 RFQREQDDITSELKGEDSYLYNHSEWMIAKLKNNWPDHWQAILEANNEQAPLTLRVNRRS 181 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 SR+ + L+ + P +RL V +LPG++ G +VQD +AQ L Sbjct: 182 ISREEFQQQLNPV-IDSDPTVFSDQGLRLAESVNVESLPGYQVGAFSVQDEAAQLSADLL 240 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 + + +LD CAAPGGK HILE P+ A V AV+++ +R R+ +NLKRL +KAT+ Sbjct: 241 DLKPQQRVLDACAAPGGKLCHILESEPKLASVEAVELEAKRAERIEENLKRLRLKATLHI 300 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 GD W +DRILLDAPCSATGVIRR+PDIK+LR+ DI ELAQ+QS+IL W Sbjct: 301 GDASE-QSWWDGDLYDRILLDAPCSATGVIRRNPDIKFLRKGEDIHELAQIQSDILANCW 359 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEE 417 LK GG L+YATCS+ P+EN QIK F+ +DA+ G + G+Q P Sbjct: 360 AMLKPGGKLLYATCSIFPQENERQIKRFISNNSDAKHLAIDASWGIEREFGRQLFPEKGG 419 Query: 418 GDGFFYAKLIK 428 DGF+YA L K Sbjct: 420 HDGFYYALLEK 430 >UniRef50_A1TWM9 Sun protein n=3 Tax=Marinobacter RepID=A1TWM9_MARAV Length = 433 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 192/426 (45%), Positives = 260/426 (61%), Gaps = 9/426 (2%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R++AA + V EQGQSLS LPP ++ + + LQ +C+G R +L+ +N+ + Sbjct: 9 RAIAANVLLAV-EQGQSLSQCLPPALNQLPPEQRPQLQAICYGTCRWFHRLEGELNQRLK 67 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 +P+ R +H+L++V L+QL Y+ +A L ETVE A+ +P L GL+NGVLR +R Sbjct: 68 KPLRKPDRIIHHLMLVALFQLRYSEQATYAVLNETVEACRALDKPHLTGLVNGVLRAAER 127 Query: 128 QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 + E R+ HP+W++++L+ +P WQ+I+EANNQ+ PM LR+N RD Sbjct: 128 EGA---PEPKDDSGRFSHPAWMVEKLRHNWPGYWQTILEANNQQAPMTLRVNALRFKRDE 184 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 +L LL EAG++ P+ ++LE P PV LP FEDG +VQD +AQ C T L Q G Sbjct: 185 YLKLLSEAGIEAHATRFAPNGIQLERPVPVDRLPWFEDGAASVQDEAAQLCTTLLDLQPG 244 Query: 248 EHILDLCAAPGGKTTHILEVAPEA-QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 + +LD CAAPGGKT ILE +VVA+D +RL RV +NL RL + AT+ Q D Sbjct: 245 QRVLDACAAPGGKTCAILEACGALDEVVAIDESAERLPRVQENLDRLDLHATLTQADAAD 304 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 W FDRILLD PCSATGVIRRHPDIK LRR+ DI LA +Q +L+A+W LK Sbjct: 305 IDSWWDGTPFDRILLDVPCSATGVIRRHPDIKLLRRESDIVPLASIQLGLLEAMWSILKP 364 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDGFF 422 GG LVYATCSV P+EN I+ FL++ A L + G G+Q P + DGFF Sbjct: 365 GGRLVYATCSVFPQENHRIIQRFLKQQNQATLKCIEADWGRDMNTGRQLFPDPDSHDGFF 424 Query: 423 YAKLIK 428 YA L K Sbjct: 425 YAVLEK 430 >UniRef50_C0GIQ4 Sun protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIQ4_9FIRM Length = 451 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 152/448 (33%), Positives = 225/448 (50%), Gaps = 22/448 (4%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLD 59 K++ + R + A+++V ++ L + + +DK L E+ +GV+ LD Sbjct: 4 KRKIDAREASLLALQRVEADDAYVNLALDEVLSSHSLDPRDKRLAAEITYGVITYKLTLD 63 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 WLI K+ RP+ + +H ++ +G YQL Y R+PP AA+ TVE K+ L + Sbjct: 64 WLIEKVSGRPIKKLDKPIHQILRIGFYQLFYLDRVPPAAAVHATVELVKKGKKRGLAPFV 123 Query: 119 NGVLRQFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAY-PEQWQSIVEANNQR 171 NGV+R R+++ L D RY HP WL++R Y PE+ + +V ANNQ Sbjct: 124 NGVMRGALRKKDHLPWPDKKKDSANYLSVRYSHPLWLVRRWLNRYGPEEAEKLVAANNQA 183 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P+ +R+N RD+ L+ L AG++ P P+ L + L + +G VQ Sbjct: 184 APLSIRVNTLRTDRDTLLSELTAAGVEAVPSTVVPEGALLTRSGRLTELAPYREGRFQVQ 243 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNL 290 SA L PQ G+ +LD C+APGGKTTH+ ++ ++A+DI RL V N Sbjct: 244 GESAMLTSRVLDPQAGDAVLDGCSAPGGKTTHLAQLMNNSGDILALDIHPHRLELVKANC 303 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 +R+G+ Q FD ILLD PCS GVIRR PD+KW R + DI +LA Sbjct: 304 RRMGVDIVRTQCLDAREIAKENPDSFDCILLDVPCSGFGVIRRKPDLKWRRSEDDIRKLA 363 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP--- 407 +Q ++L A LK GGTLVY+TC+ PEE ++ L+ D + + P P Sbjct: 364 HVQCDMLKAAAAVLKPGGTLVYSTCTNEPEETDEVVEELLKNQDDM-VPDDLRPYLPQDW 422 Query: 408 -------GKQNLPGAEEGDGFFYAKLIK 428 G LP DGFF ++L K Sbjct: 423 QQDAGKTGIHLLPHIHGVDGFFISRLKK 450 >UniRef50_Q2SQX3 Sun protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQX3_HAHCH Length = 447 Score = 473 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 182/437 (41%), Positives = 254/437 (58%), Gaps = 8/437 (1%) Query: 1 MKKQR--NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQL 58 MK+++ + R+ AA+ + V E+G+SL+ + P ++V + D++ LQ LC+G R L Sbjct: 1 MKRRKTLSARAAAAKTLRAVAEEGRSLTTAMAPALEQVEENDRSFLQALCYGACRHYLTL 60 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLI 118 + + +L+ +P+ K+R +H+L++ GL+QL + P H ++ ETV + + L+ Sbjct: 61 EHWLGQLLRQPIKAKERDIHFLLLSGLHQLAFMDKPAHVSINETVNVTKELNKLWATKLV 120 Query: 119 NGVLRQFQRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLR 177 NGVLR FQR+++ELLA A RY P WLL +L AYP Q ++ A+N + P+ LR Sbjct: 121 NGVLRSFQRRKDELLARSEADPSLRYAMPRWLLDKLSAAYPHQLDELLAASNAQAPLTLR 180 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFED-GWVTVQDASAQ 236 +N R+ +L L E + V+ E V LPGF D G +VQD +AQ Sbjct: 181 VNLQKVQREDYLNQLREVEVGAHSCEWAETGVQCEHAVDVSRLPGFFDAGLCSVQDEAAQ 240 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 + + PQ E +LD C APGGKT +LE P V AVD+D +R R D L+RL ++ Sbjct: 241 LSASLVDPQPNERVLDACCAPGGKTAALLERTPTISVTAVDVDPERQLRTRDTLQRLQLE 300 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 A V+ D QW FDRILLDAPCSATGVIRRHPDIK LRR DIP+LA+LQ ++ Sbjct: 301 ADVRTADIGDLQQWWDGTPFDRILLDAPCSATGVIRRHPDIKLLRRSEDIPQLAELQLKL 360 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNL 412 L +W LK G LVYATCS+L EEN I+ F+ DAE+ G G Q L Sbjct: 361 LRTLWTTLKPEGLLVYATCSILKEENEHIIERFIADATDAEVIPIEGKYGIQSPFGVQLL 420 Query: 413 PGAEEGDGFFYAKLIKK 429 P DGFFYA+L K+ Sbjct: 421 PVTGGHDGFFYARLRKQ 437 >UniRef50_C6MTY9 Sun protein n=1 Tax=Geobacter sp. M18 RepID=C6MTY9_9DELT Length = 449 Score = 471 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 141/447 (31%), Positives = 224/447 (50%), Gaps = 22/447 (4%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDW 60 +N R A + ++ ++ ++ K + D+ LL EL +GVLR LD Sbjct: 2 SSKNPRRAAFDILLRIEKEKSFADILIDHELSKDMIKGADRGLLTELVYGVLRRQGTLDH 61 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I + + + V L+ +GLYQ + R+P AA+ ETV+ A + P+ G IN Sbjct: 62 IIGQFSKQRTDKLELYVLLLLRLGLYQCFFLDRVPVSAAVNETVKLAKELA-PRASGFIN 120 Query: 120 GVLRQFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 +LR R ++ + A + RY HP+WL + + E +++ A ++ P Sbjct: 121 AILRNADRNRDNISYPDRAENPVGYLAVRYSHPAWLTSQWCEQLGVEGAEALAAAMSEPP 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P +R+N SR++ +A L E G+ PD +RL + LP F DG TVQD Sbjct: 181 PFTIRVNTLRISREALMARLAEEGISCSETRWSPDGIRLNQSGQITRLPSFRDGLFTVQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLK 291 S+Q +L+P+ G+ +LD C+APGGKTT I ++ ++ A D++ ++L + + Sbjct: 241 ESSQLAPLFLSPEKGDRVLDACSAPGGKTTQIAQLMGNSGEIYACDVNHKKLRLIKETCD 300 Query: 292 RLGMKATVK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ + D PS E F RIL+DAPCS GVIRR+P+ KW + D+ + A Sbjct: 301 RLGITSVRTFTMDATSPSPAIKEVTFQRILVDAPCSGLGVIRRNPEGKWSKSPDDLLQQA 360 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT------- 403 + Q IL+ + +L GTL+YATCS +EN I FL+ + + T Sbjct: 361 RTQVTILENLCKYLDKSGTLLYATCSTSVQENEYVIDTFLREHPEFVAEDLRTLFPEFAP 420 Query: 404 --PEQPGKQNLPGAEEGDGFFYAKLIK 428 E+ ++ P + DGFF A+L K Sbjct: 421 LFTERGFFRSWPHRDGMDGFFAARLKK 447 >UniRef50_A8MH88 Sun protein n=7 Tax=Clostridiaceae RepID=A8MH88_ALKOO Length = 445 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 129/443 (29%), Positives = 216/443 (48%), Gaps = 21/443 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK--DKALLQELCFGVLRTLSQLDWLIN 63 N R A + + ++ + L S D+ LL EL +GVL +D +++ Sbjct: 2 NPREGALKVLYEINVNEAFSNIALNKELNNESYNLLDRNLLTELVYGVLENQIYIDHVLS 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + L+ +G+YQLL+ R+P AA+ ETV + + + G INGVL Sbjct: 62 QFSNFQLDKMNPYTLNLLRLGIYQLLFLDRVPSFAAVNETVNLSKKYCK-KTTGFINGVL 120 Query: 123 RQFQRQQEELL------AEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMW 175 R QR + + RY HP WL++ K + + + +++ANN++P ++ Sbjct: 121 RNVQRNRNNIKMPKPEKNRIKYLSIRYSHPEWLVQLFLKHFDVNFVEELLKANNKKPDLY 180 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 LRIN S + LL+ G +A+ ++ + ++ G++ +QD S+ Sbjct: 181 LRINTLKISVADCIQLLEAEGYVVEQSKIVEEAIVVKGIHNIEKTDFYKKGYIQIQDISS 240 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLG 294 LAP+ GE ++D+C+APGGKTTHI ++ +++A DI E +L + KRLG Sbjct: 241 MLVAKALAPKEGELVMDICSAPGGKTTHIAQLMNNKGKIIARDIHEHKLKLIDRTAKRLG 300 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + + + D++L+DAPCS G+IRR P+IK+ + +DI + +LQ Sbjct: 301 IHIIQTEKFSGDHLDESFIHKADKVLVDAPCSGLGIIRRKPEIKYRKEAQDITSIVELQY 360 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT---------PE 405 +IL ++K GTLVY+TC++ PEEN ++ FL++ + L P Sbjct: 361 KILKTAAQYVKIEGTLVYSTCTINPEENDHIVQKFLEQHQNYTLVHLNNEYQDIILQEPN 420 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 + Q P DGFF AK + Sbjct: 421 KATIQLYPNINGTDGFFIAKFKR 443 >UniRef50_C4ZEV6 Sun protein n=4 Tax=Clostridiales RepID=C4ZEV6_EUBR3 Length = 469 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 123/431 (28%), Positives = 212/431 (49%), Gaps = 8/431 (1%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDW 60 + R +A + + ++ E+G +L + K +S +D+A + L G + + QLD+ Sbjct: 38 SVDTRELALEMLIEINERGAFSHIVLRSVLDKYQYLSKQDRAFMTRLVDGTIEYMLQLDY 97 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLIN 119 +I+ + + + L+ + +YQ+ Y +P A E V+ A K QL G +N Sbjct: 98 IIDSFSKTKVRKMKPFIRNLLRMSVYQIKYMDAVPDSAVCNEAVKLAKRHKFAQLSGFVN 157 Query: 120 GVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRI 178 GVLR R + + +F+ RY P W++ R AY E+ + I +A + + + +R Sbjct: 158 GVLRNIARNIDSV--QFDTLSIRYSMPQWIVDRFVAAYGEKKAEEIFKAFHNKSTISIRT 215 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N T + D A L+ G+ + A + ++ L F DG VQD S+ Sbjct: 216 NLTRCTPDELRATLEAEGVTVTAVDELNYAFVISGFDYLNGLQSFRDGLFYVQDISSMLV 275 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 AP+ G++++D+CAAPGGK+THI E+ V A D+ + ++ + +N+ R G+ Sbjct: 276 AQTAAPKKGDYVIDVCAAPGGKSTHIAELLQGSGHVFARDLTDNKVDMIEENIDRHGLNN 335 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + + D ++ D PCS GV+ R DI++ + EL LQ +IL Sbjct: 336 MSAEVWDATVFDADSAGKADILICDLPCSGLGVLGRKKDIRYKMTPGSVDELVVLQRQIL 395 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 D + ++K G LVY+TC++ EN ++ F+++ + EL ++ KQ LPG Sbjct: 396 DTVHTYVKPNGVLVYSTCTIDEAENEDNVRWFIEKHPEFELDKSFAEGTGMKQILPGEHG 455 Query: 418 GDGFFYAKLIK 428 DGFF A+ IK Sbjct: 456 SDGFFIARFIK 466 >UniRef50_Q88B41 Ribosomal RNA small subunit methyltransferase B n=23 Tax=Gammaproteobacteria RepID=RSMB_PSESM Length = 448 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 208/434 (47%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R AA+A+ V+ SL++ LP KV +D+ L Q+L FG R +L L KL Sbjct: 2 NPRLAAAKALAAVLSGKASLNSSLPTQLDKVELRDRGLTQDLAFGTARWQPRLSALAAKL 61 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + +P V L++VGLYQL Y+RIP HAA+ ETV A +K+P KGL+N VLR Sbjct: 62 LQKPFKAADADVEALLLVGLYQLFYSRIPAHAAIGETVGCADKLKKPWAKGLLNAVLRNA 121 Query: 126 QRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QR E LL E R HP WL K L+ A+PEQW++I ANN PPM LR+NR H Sbjct: 122 QRDGEALLIELEHDPVVRTAHPRWLQKALKAAWPEQWEAICAANNAHPPMILRVNRRHQR 181 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD +L LL AG++ D + L P V +LPGF +GW++VQD +AQ L Sbjct: 182 RDQYLELLKTAGLEASACTFSQDGIVLAEPCDVRSLPGFAEGWISVQDEAAQLAADLLEL 241 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 G+ +LD C APGGKT H+LEV P+ + VVAVD++ +RL RV +NL+RLG+ A + D Sbjct: 242 APGQRVLDACCAPGGKTCHLLEVQPQLSGVVAVDLEAKRLVRVRENLERLGLDAELIAAD 301 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 R +QW + F RILLDAPCSATGVIRRHPDIK R+ DI LA LQ E+LDA+WP Sbjct: 302 ARETAQWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQLDDIAALATLQGELLDALWPT 361 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET---------GTPEQPGKQNLPG 414 L+ GG LVYATCS LP EN+ I+AFL RT+ A + G + G+Q L Sbjct: 362 LQVGGMLVYATCSTLPTENTDVIEAFLARTSGARELDIAGQAGQPPAGIKQPHGRQLLAQ 421 Query: 415 AEEGDGFFYAKLIK 428 DGF+YAKLIK Sbjct: 422 QGGHDGFYYAKLIK 435 >UniRef50_P94464 Ribosomal RNA small subunit methyltransferase B n=24 Tax=Bacillales RepID=RSMB_BACSU Length = 447 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 148/450 (32%), Positives = 227/450 (50%), Gaps = 25/450 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQ 57 MKK ++R +A +A+ + +EQ Q+ SN+L ++SD+++ LL EL +G L+ Sbjct: 1 MKKT-SVRDIALEALIK-LEQNQAYSNLLLKSVIKSNELSDQNRGLLTELVYGTLQNKIA 58 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKG 116 LD+++ + +P + V L+ + LYQ+ Y +IP AA+ E VE A + Sbjct: 59 LDYMLKPFINKP-QKVKPWVIQLLRLSLYQMEYLEKIPDRAAIHEAVEIAKIRGHKGIAS 117 Query: 117 LINGVLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 +NGVLR QR+ + + HP WL+K AY E + I + Sbjct: 118 FVNGVLRSIQREGVPSFDAIEDPVRRLATETSHPEWLVKEWADAYGFEAAEKICRIHLIP 177 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P LR+N+ R L + G++ DAV+L + F++G V++Q Sbjct: 178 PKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGT-IAGTHFFQNGEVSIQ 236 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 D S+ L P++ E +LD CAAPGGK+ HI E+ + V ++D+ + ++ + + Sbjct: 237 DESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVKLIKEAA 296 Query: 291 KRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 RLG+ + D R + +QFDRIL+DAPCS GVIRR PD+K+ ++ D L Sbjct: 297 DRLGLTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPDMKYTKKPDDSARL 356 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL---CETGTPEQ 406 A++Q IL I P +K GGTLVY+TC++ EN I AF+Q D E E PE+ Sbjct: 357 AEIQLSILREIAPLVKKGGTLVYSTCTMDRTENDEVIHAFIQEHPDFEPDLSLEKRLPEK 416 Query: 407 -------PGKQNLPGAEEGDGFFYAKLIKK 429 Q LP DGFF + KK Sbjct: 417 VRPFVRDGRLQILPHYFGTDGFFICSMRKK 446 >UniRef50_Q603G1 Sun protein n=1 Tax=Methylococcus capsulatus RepID=Q603G1_METCA Length = 431 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 190/428 (44%), Positives = 261/428 (60%), Gaps = 11/428 (2%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R++AA A+ VV SL+ L + +D+A +Q LC+GVLR LD+L+ +L Sbjct: 6 RTLAAAALHDVVVDRHSLTWALGKRLPSLPDARDRAFVQSLCYGVLRAFETLDFLLGRLA 65 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P+ + L ++GL+QL + PHAA++ETVE A ++ K L+N +LR + Sbjct: 66 TKPIR--DPEIRLLALIGLHQLRSMNVKPHAAVSETVEAAG--RKSWAKPLLNAILRNYL 121 Query: 127 RQQEELLAE-FNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R++EEL + ++R HP+WL RL +PEQW+++V+ NN PPM LR+N + R Sbjct: 122 RRKEELESRALQDPESRDAHPAWLRDRLAADWPEQWETLVQQNNLPPPMTLRVNPLMNDR 181 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 +LA L EAG+ P P + L +P PV ALPGF +G V+VQD +AQ + + Sbjct: 182 AGYLARLTEAGIAARPCRHSPWGLTLGSPVPVDALPGFAEGRVSVQDEAAQLAAPLVGAE 241 Query: 246 NGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 GE +LDLCAAPGGKT H+LE++ + + VAVD D +R +R+ +NL+R + A V GD Sbjct: 242 PGERVLDLCAAPGGKTLHMLELSRGDIEAVAVDSDAERCARIRENLERERLSAAVVTGDA 301 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R P W + FDRILLDAPCSATGVIRRHPDIK LR+ D+ L +LQ+ IL A WP L Sbjct: 302 RSPESWWDGRPFDRILLDAPCSATGVIRRHPDIKLLRQAVDLDTLNELQAAILTAAWPLL 361 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAEEGDG 420 K GG LVYATCSV+ EN Q+ FL+ DA G P + G+Q L G DG Sbjct: 362 KPGGILVYATCSVIRAENEAQMSRFLEAHDDAAELPLPAAWGIPLRHGRQILTGESGMDG 421 Query: 421 FFYAKLIK 428 F+YA L K Sbjct: 422 FYYALLRK 429 >UniRef50_D1RHX8 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Legionella longbeachae D-4968 RepID=D1RHX8_LEGLO Length = 458 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 192/433 (44%), Positives = 254/433 (58%), Gaps = 13/433 (3%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 +K+ N R A + ++ + LS L +VS K E+CFG R +L + Sbjct: 30 RKKPNERLHALYILTHLLVEKTPLSQ-LMASSAEVSPMTK----EICFGFCRHYFRLQAI 84 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 N L+ + + V +++G+YQL Y ++P +A + ETV IK+ KGL+N V Sbjct: 85 ANCLIHKKPKEIELWV--ALLIGIYQLHYMKLPDYAVVKETVALLEKIKKGWAKGLVNAV 142 Query: 122 LRQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 LR F RQ +E+L N Y HP WLL+RLQK +P WQ+I +AN PPM LR+N Sbjct: 143 LRNFCRQHDEILTRLNKDPLFLYGHPQWLLRRLQKDWPNNWQAITKANEAHPPMTLRVNL 202 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 S +L +L +A + PH+ +A+ LETP VH LPGF G V+VQD +AQ + Sbjct: 203 RKISVMEYLNVLKQANITATPHSIAAEAIVLETPCDVHQLPGFAQGLVSVQDGAAQLATS 262 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L+ + G +LD C APGGKT HILE P A+ VAVDID +RL RV +NL RL + AT+ Sbjct: 263 LLSLKPGLRVLDACCAPGGKTCHILEKEPHLAECVAVDIDSKRLDRVRENLNRLHLHATL 322 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 QGD PSQW + FDRILLDAPCSATGVIRRH DIK LR D +I + ++Q +L + Sbjct: 323 LQGDASNPSQWWDGKLFDRILLDAPCSATGVIRRHSDIKLLRNDEEIATITKIQHTMLSS 382 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGA 415 +WP L GG LVYATCSV+ EN QI F++ D L G + G+Q LPG Sbjct: 383 LWPLLTKGGLLVYATCSVMLAENEQQIANFIKNNPDCNLITKSWPWGHTTKYGQQILPGE 442 Query: 416 EEGDGFFYAKLIK 428 + DGFFYA L K Sbjct: 443 QCMDGFFYAVLFK 455 >UniRef50_D1KD39 Ribosomal RNA small subunit methyltransferase B n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KD39_9GAMM Length = 423 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 170/431 (39%), Positives = 249/431 (57%), Gaps = 17/431 (3%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 + N R++A A+ VV +SLS+ + P D+D AL + L FG +R QL+ + Sbjct: 4 TNKSNTRAVALDAICSVVLDKRSLSSFVYP------DQDDALAKSLVFGTIRFYHQLNDI 57 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + L+ + + +H L+++G YQ+LY+++ HA++ ETV+ + + KGL+N + Sbjct: 58 VTDLLNHSLEKEDLDIHCLMLLGAYQILYSKVAIHASIFETVDTLNFLDKTWAKGLVNAI 117 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 LRQ R ++ LLA+ Y HP+WL+K++++ YP+ ++ I NN + PM +R++ Sbjct: 118 LRQIDRDKDSLLAQ-----THYSHPTWLVKKIKQNYPDDFEQIFTQNNTQAPMTIRVHP- 171 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 S D + L ++ P A+ L+ P V+ LP FE G VQDASAQ Sbjct: 172 KSSVDDYQQSLANENVQSNKLEITPQALILDKPMSVYDLPDFESGSCYVQDASAQLAANL 231 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 L P+N + ILD C+APGGK TH+ E+AP A +VA+D +RL RV N +R + Sbjct: 232 LDPKNNDVILDACSAPGGKATHLCELAPNATIVALDNSSERLERVKQNTQRFNIDNIEII 291 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 W + F++ILLDAPCSATGVIRRHPDIK LR+ +DI L +LQ++IL +W Sbjct: 292 KGNAQQQDWWDGELFNKILLDAPCSATGVIRRHPDIKLLRKPKDITNLVKLQAKILANLW 351 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEE 417 LK G L+YATCS+L EN QI FL+ DAE + G GKQ LP + E Sbjct: 352 SMLKPDGVLLYATCSILKSENEDQITHFLESHPDAEEIKTNLDWGIDSFVGKQQLP-SHE 410 Query: 418 GDGFFYAKLIK 428 DGF+YAK+ K Sbjct: 411 FDGFYYAKIRK 421 >UniRef50_Q5ZSC6 rRNA methyltransferase (SUN protein) n=5 Tax=Gammaproteobacteria RepID=Q5ZSC6_LEGPH Length = 427 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 184/431 (42%), Positives = 260/431 (60%), Gaps = 14/431 (3%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 + N R A + + ++E ++LS ++ P Q++S K E+C+G R +L + + Sbjct: 2 KVNDRFNALKILTALIESRKNLSYLMSP--QEISPMTK----EICYGFCRHYFRLQSIAD 55 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+ + + + ++++G+YQL Y P +A + ETV +K+ KGL+N VLR Sbjct: 56 TLINKRPKDNELWI--VLLIGIYQLQYMNKPDYAVVKETVSLLGQVKKSWAKGLVNAVLR 113 Query: 124 QFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 F R+++ +L + A Y P+WLL+RLQK +P WQ I AN++ PPM LR+N Sbjct: 114 NFCRRKDHILEKLAAEPVFIYGQPNWLLQRLQKDWPNDWQFIAAANDRHPPMTLRVNVLK 173 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 HS D +L LL ++G++ F H PD + L P V LPGF G V+VQDA+ Q L Sbjct: 174 HSVDEYLDLLKKSGIEAFKHPVAPDGITLAIPCDVMTLPGFAQGSVSVQDAAPQLAAYLL 233 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 + + G+ +LD C APGGKT HILE P A VA+D+D QRL RV DNL RL ++ATV Q Sbjct: 234 SLKPGQRVLDACCAPGGKTCHILEKEPGLASCVALDLDPQRLQRVRDNLNRLDLQATVVQ 293 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 GD P W FDRILLDAPCSATGVIRRH DIK LR D +I ++Q+QS +L+++W Sbjct: 294 GDVLEPRSWWDGHPFDRILLDAPCSATGVIRRHSDIKLLRTDEEISAISQVQSSMLNSLW 353 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE----TGTPEQPGKQNLPGAEE 417 P L GG +VYATCS++ +EN LQI F+ +D ++ + G G+Q LPG Sbjct: 354 PLLAPGGLMVYATCSIMSDENELQIAQFVAEHSDCQVSDGKWSWGRWTGHGQQILPGEHS 413 Query: 418 GDGFFYAKLIK 428 DGFFY+ L K Sbjct: 414 MDGFFYSVLRK 424 >UniRef50_C9RZP8 Sun protein n=5 Tax=Bacillales RepID=C9RZP8_GEOSY Length = 444 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 151/444 (34%), Positives = 217/444 (48%), Gaps = 22/444 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R +A + + ++G L QK + +D ALL E+ +G ++ LD+ + Sbjct: 2 NVRELALDTLLAIEQKGAYSHLQLNEAIQKGRLDGRDAALLTEIVYGTVQRRDTLDYYLA 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + R + V L+ + LYQ++Y R+P AA+ E VE A + L+NGVL Sbjct: 62 PFL-RKARRLEPWVRVLLRLTLYQMVYLDRVPDRAAVFEAVEIAKRRGHRGIASLVNGVL 120 Query: 123 RQFQRQQEELLAEFNASDARY----LHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 R R+ + + + R HP WL++R + Y E+ + E N + P R Sbjct: 121 RAIGREGLPSIEAVDDAGKRLALATSHPEWLVRRWIQQYGYEEAARMCETNLRPPQSTAR 180 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 +NR + + L L GM+ P P+A+R E + F GW+T+QD S+ Sbjct: 181 VNRLRATVEEALERLRAEGMQVIPGHVAPEAIRAEKG-NLAHTETFRAGWLTIQDESSML 239 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L P GE +LD CAAPGGKTTHI E +VVAVDI E ++ + KRLG+ Sbjct: 240 VARALDPAPGERVLDCCAAPGGKTTHIAERMDGRGEVVAVDIHEHKVMLIEQQAKRLGLD 299 Query: 297 ATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 D R + + FDR+L+DAPC+ GVIRR P+IK+ + I L ++Q Sbjct: 300 NVATLSLDSRRLGERFAPESFDRVLVDAPCTGFGVIRRKPEIKYTKGKDAIAALVEIQQA 359 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP-------- 407 IL A P LK GGTLVY+TC+V EEN I FL D L + P Sbjct: 360 ILRAAAPLLKKGGTLVYSTCTVEREENEEAIARFLADHPDFFLDASLAERMPKPVRPHVK 419 Query: 408 --GKQNLPGAEEGDGFFYAKLIKK 429 Q LP + DGFF A+L K+ Sbjct: 420 GGMLQLLPHHFDSDGFFIARLRKR 443 >UniRef50_B3PGY5 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Gammaproteobacteria RepID=B3PGY5_CELJU Length = 432 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 269/427 (62%), Gaps = 5/427 (1%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +R+ A Q + Q++ Q SLS++LP + K++++D+ LLQ+LCFGV R QL + L+ Sbjct: 4 VRAAATQVLAQILRQQGSLSSLLPAMSVKIAEQDRPLLQQLCFGVCRYYPQLQAYTSLLL 63 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P+ K V L+++GLYQL++TRIP HAA+ ETVE IK+ L+NGVLRQFQ Sbjct: 64 DKPLRAKDSDVQALLLLGLYQLIHTRIPDHAAIGETVEVTRDIKKAWATKLVNGVLRQFQ 123 Query: 127 RQQEELLAEFNASDARYL-HPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R Q+ L + + A HP WL L+K++P+Q S++ ANN+ PP LR+N H SR Sbjct: 124 RDQQTLGEKLASDRAFSSNHPDWLEGMLRKSWPQQTDSLLAANNEHPPFTLRLNTRHMSR 183 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 D +LA L + P + L +LPGF G ++VQD +AQ L Sbjct: 184 DDYLAQLRALDIAAGATPFSPYGITLVQACDPRSLPGFAQGLISVQDEAAQLSGDLLQLA 243 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 G +LD C APGGKT H+LE+ P +V A+D++E+RL RV DNL RLG+ A ++ GDG Sbjct: 244 PGLRVLDACCAPGGKTGHLLEIEPRMKVTAMDVEERRLQRVRDNLGRLGVTADIRCGDGT 303 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 P W + +DRILLDAPCSATG+IRRHPDIK LR +I LAQLQ ++LD++WP LK Sbjct: 304 RPEAWWDGEPYDRILLDAPCSATGIIRRHPDIKVLRTPEEIARLAQLQGQLLDSLWPLLK 363 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDGF 421 GG L+YATCSV+P EN+ ++AF+QR +A G + G+Q LP E DGF Sbjct: 364 PGGILLYATCSVMPRENTRVVEAFIQRQPEARCDTLDVPWGLLQPCGRQLLPQPEGHDGF 423 Query: 422 FYAKLIK 428 +YA+L K Sbjct: 424 YYARLRK 430 >UniRef50_B5JST2 Ribosomal RNA small subunit methyltransferase B n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JST2_9GAMM Length = 431 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 188/432 (43%), Positives = 254/432 (58%), Gaps = 11/432 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R A +A+ V +QGQSLS LP L + +D+ L QEL +G LR + +WL +L Sbjct: 2 NARQQALRAITSV-QQGQSLSAALPDLLAPLPKRDRGLCQELSYGSLRYYHRYEWLSQQL 60 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + +P K + ++ +GLYQL RIP HAA++ TV +K+ KG+IN VLR Sbjct: 61 LKKPFKHKDSDLQAVLALGLYQLFEMRIPDHAAVSNTVALVNGLKKSWAKGVINAVLRNA 120 Query: 126 QRQQEELLAEF-NASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 RQ++E + + A++ P WLL L+ +P+QW I EA+ +PPM LRI + + Sbjct: 121 LRQRDEWRGKIADEEAAQHSLPRWLLNFLEGNWPDQWTGIAEASLAKPPMTLRI--SGGA 178 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD + L ++ A+ + P LPGF G +VQDA+AQ L P Sbjct: 179 RDQYRQRLSALDIECHAPERADWALTITPPVDTDVLPGFAKGEASVQDAAAQWAAPLLNP 238 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q GE +LD CAAPGGKT H+LE A +VA+D++ +RL+RV NL RLG A + D Sbjct: 239 QAGERVLDACAAPGGKTGHMLEWASALDLVALDLEPKRLARVEQNLTRLGRSAELLSADL 298 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R ++W Q FDRILLDAPCSA+GVIRRHPDIK LR+ DI L +LQ++ LDA W L Sbjct: 299 RDTARWWNGQAFDRILLDAPCSASGVIRRHPDIKLLRQPEDINALVELQAQCLDAAWSTL 358 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE------TGTPEQPGKQNLP-GAEE 417 K GGTL+YATCS+ EN Q++ FL+R +DA L G G+Q P G Sbjct: 359 KEGGTLLYATCSLFKAENQHQVREFLERHSDAALDAFSETALPGIDTGYGQQFFPGGPFN 418 Query: 418 GDGFFYAKLIKK 429 GDGFFYA+L K+ Sbjct: 419 GDGFFYARLRKR 430 >UniRef50_B9M341 Sun protein n=4 Tax=Geobacter RepID=B9M341_GEOSF Length = 448 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 141/448 (31%), Positives = 222/448 (49%), Gaps = 22/448 (4%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDW 60 N RS A + + ++ ++ ++ + D+ LL EL +GVLR + LD Sbjct: 2 SSSNPRSAAFEILLRIDKERSYADILIDRELSAGALQGPDRGLLTELVYGVLRRQATLDH 61 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I + ++ + +R+V L+ +GLYQ+ Y R+P AA+ ETV+ A + P+ G IN Sbjct: 62 IIRRFSSQRLERLERSVLLLLRIGLYQMFYLDRVPVSAAVNETVKLAKVLV-PRASGFIN 120 Query: 120 GVLRQFQRQQEELLAEFNASDAR------YLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 VLR R+++ + D Y HP WL ++ + + A + P Sbjct: 121 AVLRNADRERDHISYPDREKDPAAYLATVYSHPVWLAAAWIGQLGLDEAEMLARAMAEPP 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 + +R N +R + +L G++ P A+R+ V L F DG VQD Sbjct: 181 AITVRTNTLKTTRQQLMEILSAEGVQCETGRFSPMAIRINLSGSVSRLKSFRDGLFFVQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLK 291 S+Q +L PQ GE +LD CAAPGGK+T + ++ +++A D+ ++L V +N Sbjct: 241 ESSQLAAMFLGPQAGERVLDACAAPGGKSTQLAQLMGDRGEILACDVIGRKLKLVDENAA 300 Query: 292 RLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ + D P + DRILLDAPCS GVIRR+P+ KW + D+ +LA Sbjct: 301 RLGISSIRTVLLDTARPLKSLERSPLDRILLDAPCSGLGVIRRNPEGKWWKSAADVIDLA 360 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE----- 405 + Q +L+ + HL++GG+L+YATCS EEN I+AFL R + + + Sbjct: 361 KGQRALLENLAGHLRSGGSLLYATCSTAVEENEAVIEAFLSRHDEFVIEDLRLLFPDLAE 420 Query: 406 ----QPGKQNLPGAEEGDGFFYAKLIKK 429 + P DGFF A+L KK Sbjct: 421 LFTPAGFFRAWPHRHGMDGFFAARLKKK 448 >UniRef50_B1HQE5 Ribosomal RNA small subunit methyltransferase B n=5 Tax=Bacillaceae RepID=B1HQE5_LYSSC Length = 453 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 138/442 (31%), Positives = 211/442 (47%), Gaps = 22/442 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R A + V + + +L + K+ KD+ALL EL +G L+ LD+ + Sbjct: 12 NVRDAALSILLAVDKNQAYSNLLLNETIKRHKIEAKDRALLTELTYGTLQHKMTLDYYLE 71 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + V +L+ + LYQ+ Y RIP HAA+ E VE A + +NG+L Sbjct: 72 PFIRGSI---DHWVRWLLRISLYQMQYLTRIPAHAAVNEAVEIAKRRGHRGIASTVNGIL 128 Query: 123 RQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 R RQ ++ HP WL++R Y E ++ NN P +R Sbjct: 129 RSVLRQGVPSINDIENPIERLAIETSHPIWLVQRFVNNYGLEVATGMLHENNVPPIQTVR 188 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 +N T + + +A L+E G+ P+ + + P F++G +T+QD S+ Sbjct: 189 VNTTKVTVEQAMAELEEEGLTAKQSDVIPECLHVTNGQP-ARTNAFKEGHITIQDESSMI 247 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L P G +LD+CAAPGGKTTH+ E+ E ++A D+ +L + N +RLG+ Sbjct: 248 PANVLKPSPGMRVLDMCAAPGGKTTHLAEIMKNEGSILATDLHPHKLDLIDHNTERLGLD 307 Query: 297 ATVKQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 DGR ++ + +D IL+DAPCS GV+RR PDIK+ +R+ D+ L +Q Sbjct: 308 IIETAPIDGRKAPEFLQAESYDAILVDAPCSGLGVMRRKPDIKYTKREEDLENLQTIQLA 367 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT--------PEQP 407 +LDA LK G LVY+TC+V +EN + AFL + E + + Sbjct: 368 LLDAATKVLKIKGKLVYSTCTVDKQENEGTVNAFLAAHPEMEAIQLESLPTKLAEKQANG 427 Query: 408 GKQNLPGAEEGDGFFYAKLIKK 429 Q P DGFF A KK Sbjct: 428 MLQVFPQDFGSDGFFVAAFRKK 449 >UniRef50_P72943 Ribosomal RNA small subunit methyltransferase B n=4 Tax=Chroococcales RepID=RSMB_SYNY3 Length = 446 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 152/443 (34%), Positives = 219/443 (49%), Gaps = 20/443 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 + R +A + + + + QK +S D+ EL +GV+R LD LI Sbjct: 3 SARQLAFLILRDINRRDSYTDVAIDRALQKHPLSPPDRRFCTELVYGVVRRQRTLDCLIE 62 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVL 122 +L RP+ + + ++ +GLYQL Y +P AA+ V+ A A L ++NG+L Sbjct: 63 QLGDRPIGKQPPDLRRIVQLGLYQLRYLDQVPASAAVNTGVDLAKANGLKGLSKVVNGML 122 Query: 123 RQFQRQQEE----LLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLR 177 R++QR +E+ L E + +Y P WL++ ++ + + + +S+ NQ P + LR Sbjct: 123 RRYQRAEEQGKNILDQEKISLGEQYSFPDWLMELFEQTWGKAETESLCAYFNQNPSLDLR 182 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP-APVHALPGFEDGWVTVQDASAQ 236 IN SR L E + A P +RL + LPGF +GW TVQDASAQ Sbjct: 183 INPLKTSRVEVAQSLAELNLTTTAMAGLPQGLRLGGKTGAITQLPGFAEGWWTVQDASAQ 242 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM 295 L PQ E I D+CAAPGGKTTHI E+ + Q+ A D RL ++ +RLG+ Sbjct: 243 WVAQILNPQPEETIFDVCAAPGGKTTHIAELMGDQGQIYAGDRHGWRLQKLAVTQQRLGL 302 Query: 296 KAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + + +GD P + DR LLD PCS G + R+PD++W + I L LQ Sbjct: 303 TSIKIWEGDLTQPGVKPPVELVDRALLDVPCSGLGTLHRNPDLRWRQTPATIATLLPLQQ 362 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG------ 408 +L AI P +K+GGTLVY+TC++ P EN QI+ FLQ D G Sbjct: 363 ALLKAIAPLVKSGGTLVYSTCTLNPAENEAQIERFLQDHEDWRSEPFEWTSPQGQTNSVT 422 Query: 409 ---KQNLPGAEEGDGFFYAKLIK 428 LP DGFF A L K Sbjct: 423 SGMLTILPHHHHQDGFFIANLKK 445 >UniRef50_A1WZH2 Sun protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZH2_HALHL Length = 429 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 175/428 (40%), Positives = 240/428 (56%), Gaps = 6/428 (1%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 R A +E+V+E+G++L L +VS+++++LLQ L +G LR L++L+ + Sbjct: 2 STPPRVAAVHVLERVLERGETLDEALEAQFSRVSERNRSLLQALVYGALRWLTRLEAQVA 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L R + L+++G ++ P HAA++E V+ A ++R + G++N VLR Sbjct: 62 TLTPRDDWRADPLLRGLLVIGAWEAQGLATPAHAAVSEAVDAARRLRRARAAGMVNAVLR 121 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 + + A+ ARY P WLL L++A+PE W ++ EA N PPM LR +R Sbjct: 122 KLHKATPPGPAD---EAARYALPPWLLDHLRRAWPEDWPAVAEAGNAHPPMTLRFDRNRI 178 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 SR++ L L E + P P A L P PV LPGF +GW++VQD +AQ L Sbjct: 179 SREACLQSLAEQEIPAHPGEVAPSAATLHAPVPVARLPGFAEGWLSVQDEAAQLAAPLLD 238 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 PQ G+ +LD CAAPGGKT H+LE P A V A+D +RL +V DNL R G +A D Sbjct: 239 PQPGDRVLDACAAPGGKTLHLLEHTPTAAVTALDRSSRRLRQVRDNLARGGYEAQCLAAD 298 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 P W + F RILLDAPC+ +GVIRRHPDIKWLR D +A Q +L A+W Sbjct: 299 AADPEAWWDGEPFQRILLDAPCTGSGVIRRHPDIKWLRGVDDPARMAAAQRHLLAALWRV 358 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE---LCETGTPEQPGKQNLPGAEEGDG 420 L GG L+YATCS+ PEEN + FL ADA+ L G G Q LPG DG Sbjct: 359 LAPGGRLLYATCSIFPEENEQVVAGFLAEHADAKPGPLAPVGRCTGSGCQILPGEHGMDG 418 Query: 421 FFYAKLIK 428 FFYA L + Sbjct: 419 FFYACLER 426 >UniRef50_B0KA07 Sun protein n=11 Tax=Thermoanaerobacterales RepID=B0KA07_THEP3 Length = 444 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 129/445 (28%), Positives = 227/445 (51%), Gaps = 28/445 (6%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A + +++V+ + + Q++ + D+ +EL FGV+ LD++++ Sbjct: 3 PREIAYKILQEVLSKEAYANISFNKHLKGQELKEIDRGFTKELVFGVIERKYTLDFILSF 62 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + + +GLYQLLY ++P +AA+ ETV A + + IN VLR Sbjct: 63 FVKK---APDLKTMIFLEMGLYQLLYMDKVPSYAAINETVNIAKKVLGIKRANFINAVLR 119 Query: 124 QFQRQQEELLAEFNASDAR------YLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWL 176 + R++E ++ D + Y +P W+++RL Y E+ ++++++ N+RP + Sbjct: 120 NYDREKERVIFPDKERDLKQYLKVTYSYPDWIVERLLNNYDEEKAEALLKSLNERPEICY 179 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 R+N + LLD G+ +A+ + P + +++G++ +QD ++ Sbjct: 180 RVNTLKIDIEDLKRLLDSDGIAYKKGYYLEEALYIYIKNP-ESHQLYKEGFIYIQDEASM 238 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGM 295 L P+ GE ++D+CAAPGGKTTHI ++ +VVA D+ RL + +N KRLG+ Sbjct: 239 LVSKILNPKEGETVIDVCAAPGGKTTHIAQLMKNNGKVVAFDLHPHRLELIKENCKRLGI 298 Query: 296 KATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKW-LRRDRDIPELAQLQ 353 + D + ++ E+ D++L D PC+ G+IR+ PDIK ++I EL + Q Sbjct: 299 TNVKTEAFDSTFVNKKYLEK-ADKVLADVPCTGIGIIRKKPDIKLKNYTRKEISELIETQ 357 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK---- 409 +ILD+ ++K GG LVY+TC++ EEN I FL+ D +L + G Sbjct: 358 YKILDSSSKYVKKGGFLVYSTCTIGKEENQNVIMKFLKEHPDFKLVDIKAEMPSGLNIET 417 Query: 410 ------QNLPGAEEGDGFFYAKLIK 428 Q P E DGFF +KL + Sbjct: 418 ASLGYVQTTPLEHEIDGFFISKLRR 442 >UniRef50_P45679 Ribosomal RNA small subunit methyltransferase B n=6 Tax=Coxiella burnetii RepID=RSMB_COXBU Length = 430 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 188/433 (43%), Positives = 266/433 (61%), Gaps = 14/433 (3%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R+ A V QVV++ SL+ +L + K+++L+QELC+G LR +L + KL Sbjct: 2 NTRATTAILVNQVVQKKCSLTALLSA-----NKKNQSLIQELCYGTLRWYFKLKLIAEKL 56 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + P+ K + LI+ G YQL Y IP H + +TV A +K+P KGLIN +LR+F Sbjct: 57 LHAPLRDKDHDIFCLILTGFYQLNYLNIPTHTIVNQTVGAAEILKKPWAKGLINKLLRRF 116 Query: 126 QRQQEELLA-EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 +++ELL + +Y HP W ++ ++KA+P+ W+SI+ ANN RPPM LR+N T S Sbjct: 117 IAEKDELLTFTEKTIEGQYAHPLWFIQHIKKAWPDHWESILIANNARPPMTLRVNLTKIS 176 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 R+ +L +LD+ + P P A++LE P VH LPGF +G+ +QDA+ Q L Sbjct: 177 REIYLEMLDQKNISAKPLDFLPAAIQLEKPCSVHQLPGFNEGYCYIQDAAGQFAAYLLKL 236 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ-- 301 +N + +LD CAAPG KT+HILEV P +VA+D ++QRL+R+ +N+ RLG++ Q Sbjct: 237 ENNQTVLDACAAPGSKTSHILEVNPHLKTLVAIDNNKQRLNRIKENITRLGLRQEHLQCL 296 Query: 302 -GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 D QW + FDRILLDAPCSATGVIRRHPDIK LR+ DI + Q + ++L+A+ Sbjct: 297 LADVSQIDQWSSGELFDRILLDAPCSATGVIRRHPDIKLLRQPGDISQYHQKKLQLLNAL 356 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAE 416 W LK GG L+Y+TCSVLP+EN I+ FL EL T G + G Q LPG + Sbjct: 357 WTVLKAGGFLLYSTCSVLPDENEKVIEEFLSTHDKVELSPTNVHGGLQLKYGVQQLPGQD 416 Query: 417 EGDGFFYAKLIKK 429 DGF+Y+ L K Sbjct: 417 NKDGFYYSLLFKN 429 >UniRef50_Q2RK22 Sun protein n=3 Tax=Clostridia RepID=Q2RK22_MOOTA Length = 457 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 144/452 (31%), Positives = 218/452 (48%), Gaps = 25/452 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQL 58 +K + R A Q + +V E+G L + + + +++AL EL + ++ L Sbjct: 4 IKPAVSAREAALQVIYRVTEEGAYAGLALDEVLKSAGLDGRERALATELAYSAIKAWGTL 63 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 DW + + +P+ + ++ +G QLLY RIPP AA+ ETVE A GL Sbjct: 64 DWALGLFLRQPLEKLPPWIRCVLRLGATQLLYVPRIPPRAAIYETVELAKKYGHRGTTGL 123 Query: 118 INGVLRQFQRQQEELLAEFNASDA------RYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +NGVLR RQ++ L +D RY HP WL++R + + ++ + + A+N+ Sbjct: 124 VNGVLRHLDRQKDALPYPDWKTDPAGYLALRYYHPRWLVERWLEEFGYQETEYLCRADNE 183 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 PP R+N +D A L G P P+ + +E + A P F++G V Sbjct: 184 PPPTIARVNTLKTRKDVLAARLQAEGATVRPARYAPEGLVVEGLGALEASPSFQEGLFYV 243 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 QD +Q L P +G ++D AAPGGKTTH+ ++ ++A D+ RL + N Sbjct: 244 QDEGSQLVSHALHPDSGAWVIDASAAPGGKTTHLAQLMADRGTILACDVHRGRLDLIAAN 303 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 +RLG+ D R + D +L+DAPCS GV+RR PD +W + E Sbjct: 304 CRRLGVTCVRTVLVDARELGERYP-AAADYLLIDAPCSGLGVLRRRPDARWRKEAPRTRE 362 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL--CETGTPEQ 406 LA+LQ IL LK GG LVY+TC++LPEEN ++ FL+R + E P Sbjct: 363 LARLQLAILMGARQALKPGGVLVYSTCTLLPEENQEVVREFLERAGEFRPDSLEPWLPVL 422 Query: 407 P----------GKQNLPGAEEGDGFFYAKLIK 428 P Q LP DGFF A++ K Sbjct: 423 PPDLMVTARQGWVQFLPQRHGTDGFFIARIKK 454 >UniRef50_B0A9Y2 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0A9Y2_9CLOT Length = 441 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 118/438 (26%), Positives = 218/438 (49%), Gaps = 19/438 (4%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R++A + + + + + + + + ++D+ E+ +GV+ LD++I+KL Sbjct: 4 RNLAYKVLFDIEKNQNYSNMAINKHFKDCNLDNRDRGFATEIIYGVVENKIYLDYIIDKL 63 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 V L+ +G+YQ+L+ + +AA+ ETV + + G +N VLR Sbjct: 64 SKIKSNKLNLKVKILLRMGIYQILFLDSVSDYAAVNETVNLTKKLDN-RSAGFVNAVLRN 122 Query: 125 FQRQQEEL-----LAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRI 178 RQ+E++ + +Y + W+++ + + + ++EAN +RP ++LR+ Sbjct: 123 VIRQKEDIGEVKIKDTVDNLATKYSYNKWIVRNWISNFGREFTEDLLEANTERPSIYLRV 182 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N +RD + LL+E + +A+++ + ++ G TVQD S+ Sbjct: 183 NTLKTTRDELIKLLEEQEVNCEKVPFMDEAIKVNNLKNIENNELYKKGLFTVQDISSMLV 242 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKA 297 L PQ +LD+C+APGGKTTHI + QV++ DI E ++ + +++ RLG+K Sbjct: 243 GKILNPQKDTKVLDVCSAPGGKTTHIATLMENSGQVISRDIFEHKIKLIQNSVNRLGLKN 302 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 Q +FD +L D PCS G+I+R P+IK+ + +I +L +LQ +IL Sbjct: 303 VDVQLFDALNLDKDSIDKFDSVLADVPCSGLGIIKRKPEIKY-KEKEEIKDLPKLQKQIL 361 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL-------CETGTPEQPGKQ 410 ++K GGTL+Y+TC++ +EN +++FLQ +L + ++ + Sbjct: 362 QNAAKYVKVGGTLIYSTCTIQDDENIEVVESFLQSNKRFKLEKIENINIDLENEDKGYLK 421 Query: 411 NLPGAEEGDGFFYAKLIK 428 P DGFF AKL + Sbjct: 422 IYPNVHGMDGFFIAKLKR 439 >UniRef50_UPI0001C335A0 ribosomal RNA small subunit methyltransferase RsmB n=3 Tax=Cyanobacteria RepID=UPI0001C335A0 Length = 453 Score = 454 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 133/449 (29%), Positives = 223/449 (49%), Gaps = 24/449 (5%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDW 60 K N R + + + ++ + ++ L ++S +D+ L EL +G++R LD Sbjct: 2 KVSNARQLVLKILREIDKNNSFINISLDSAFKHNELSRQDRGLCTELVYGIIRCQRTLDS 61 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLIN 119 LI++L + + + ++ +GLYQLLY +P AA+ +V+ A L ++N Sbjct: 62 LIDQLGNKKSQKQSPVLRRILHIGLYQLLYLDHVPLSAAVNTSVDLAKNNNLNVLSKVVN 121 Query: 120 GVLRQFQRQQEE-----LLAE--FNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQR 171 +LR++ R +++ +L++ N + +Y P+W++K + + + NQ Sbjct: 122 AILREYIRVKKKENCKLILSKDFVNTTAIKYSFPNWIVKNWYQQWGGDTSVKLCYWFNQS 181 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP-APVHALPGFEDGWVTV 230 P + +R+N + L A + P ++RL+ + LPGF G TV Sbjct: 182 PTIDIRVNVLGKTTQEIKNELIMANVNVEYLPHLPCSLRLKGQTGDIKNLPGFIKGDWTV 241 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 QD SAQ L P+ GE ++D CAAPGGKTTHI E+ + ++A D RL+++ N Sbjct: 242 QDISAQLVSYLLDPKIGETVIDACAAPGGKTTHIAELMRDKGLILACDRISSRLTKIQQN 301 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 ++RL +++ + +GD RY Q+ DR+L+DAPCS G + R+PDI+W + I + Sbjct: 302 IERLKLRSIKLVKGDSRYLQQF--NNFADRVLVDAPCSGLGTLHRNPDIRWRQTPEKIKQ 359 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA--------ELCE 400 L+ +Q EILD +K G LVY+TC++ EN + FL+ + +L Sbjct: 360 LSIIQQEILDKASKWVKPNGVLVYSTCTLNVSENETIVCNFLKNNPEWNIEKPLFSKLFS 419 Query: 401 TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 Q LP DGFF KL K Sbjct: 420 PFITSSGWLQTLPHEHNMDGFFMVKLRKN 448 >UniRef50_Q2JK83 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JK83_SYNJB Length = 457 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 150/459 (32%), Positives = 226/459 (49%), Gaps = 42/459 (9%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R +A A++++ Q +L L + D+ L+ EL +G+ R LD LI+ Sbjct: 2 NARQLALLALQKIERQNAYADLVLGHLLANSSLIPADRHLVSELVYGITRRRRTLDALID 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVL 122 L RP + + ++ +GLYQL + IP AA+ +VE A + L G++NG+L Sbjct: 62 CLAQRPAHKQPPDLRLILHLGLYQLAFLDQIPASAAIHTSVELARQMGLGSLTGVVNGIL 121 Query: 123 RQFQR------QQEELLA--------EFNASDARYLHPSWLLKRL-QKAYPEQWQSIVEA 167 R +QR +++ L A R+ P WL+ ++ P + + + Sbjct: 122 RAYQRQVLDQPEKDPLKPLEDTLPADPIQALGIRHSFPDWLVSLWWERLGPVETEQLCAW 181 Query: 168 NNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL-ETPAPVHALPGFEDG 226 NQ P + LR+N + + L AG+ P ++ P A+RL + + ALPGF G Sbjct: 182 FNQPPHLDLRVNPLRADVNKVIQALAAAGIPALPISEVPGALRLQDHAGDITALPGFAQG 241 Query: 227 WVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSR 285 W +VQDASAQ + WL PQ GE ++D CAAPGGKTT I + + ++ A+D RL R Sbjct: 242 WWSVQDASAQQVVHWLDPQPGERVIDCCAAPGGKTTQIAQHMQDRGEIWALDRHPHRLRR 301 Query: 286 VYDNLKRLGMKAT----------------VKQGDGRYPSQWCGEQQFDRILLDAPCSATG 329 + +N +RLG+ + V + P+ Q DR+LLDAPCS G Sbjct: 302 LEENRQRLGLSSIRPLAIDLLSLSAAADRVSGTESLPPAPLPPWQSADRVLLDAPCSGLG 361 Query: 330 VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAF 389 + RH D +W + IPELA LQ+++L LK GG LVYATC++ P EN I+AF Sbjct: 362 TLHRHADARWRQTPERIPELAHLQAQLLQVAARWLKPGGVLVYATCTLHPAENEEIIQAF 421 Query: 390 LQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 L + E P ++ DGFF +L + Sbjct: 422 LDSHPNW------AAEGDPLLIWPHRQDRDGFFIQRLRR 454 >UniRef50_A0Q113 Sun protein n=35 Tax=Clostridium RepID=A0Q113_CLONN Length = 443 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 129/446 (28%), Positives = 216/446 (48%), Gaps = 23/446 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQL 58 M+K R + +E V + + +L K + DKDK L+ E+ +G ++ + Sbjct: 1 MEK---ARKICVDILEVVFNKNAYSNIVLRQTLNKNKIDDKDKGLITEIVYGTIKYKYTI 57 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 D ++N + + + V ++ + +YQ+ + +IP AA+ E VE A K L Sbjct: 58 DTILNNFLKKGIKSLDSYVLNILRITVYQIKFLDKIPNFAAVNEAVEIAKKEKSVGASKL 117 Query: 118 INGVLRQFQRQQE----ELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRP 172 +NGVLR + R + +Y + WL+ L K Y + + I++ N+RP Sbjct: 118 VNGVLRNYLRNLDKKYYNDKNLVETLCFKYSYDKWLVNMLIKQYGNEIAEDILKGLNERP 177 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 + +R+N D + L+E G P+A+ + + P F++G +TVQD Sbjct: 178 AVTVRVNNLKTDHDEAFSNLEEYGYDVEEGYICPEAIVINKGKSIEKNPLFKEGKITVQD 237 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLK 291 SA + + G +LDLC+APGGKTTHI E+ +V A DI E +LS V +N K Sbjct: 238 ESAMLVAPSIDAKEGATVLDLCSAPGGKTTHISEIMNNTGIVKAFDIHENKLSLVKENAK 297 Query: 292 RLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ + D ++ E D +L+D PCS G+IR+ P+IK+ + + ++ Sbjct: 298 RLGIDNISCAEMDASKFNKEL-ENSADMVLIDVPCSGLGIIRKKPEIKYTKDIKSTKDIV 356 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------ 404 +Q +I++ ++K GTL+Y+TC++ EEN I F+++ + ++ Sbjct: 357 AIQKKIMENAAKYVKKEGTLLYSTCTINKEENEKNINWFIKKFPEYKVEPLFYGNMSNII 416 Query: 405 --EQPGKQNLPGAEEGDGFFYAKLIK 428 E LP DGFF AKL K Sbjct: 417 YNENGTVTILPNKY-MDGFFIAKLKK 441 >UniRef50_C0N5F9 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5F9_9GAMM Length = 406 Score = 453 bits (1165), Expect = e-126, Method: Composition-based stats. Identities = 176/406 (43%), Positives = 239/406 (58%), Gaps = 5/406 (1%) Query: 29 LPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQL 88 + +++D +++ Q+LC+GVLR L +L N+L+ +P K + L + GLYQL Sbjct: 1 MAAFLPQLNDNERSFYQQLCYGVLRLHPTLIFLGNQLLKKPFKNKDADIAALFLTGLYQL 60 Query: 89 LYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASD-ARYLHPS 147 R P HAA++ETV A + + GL+N LR +QRQ EL A+ + A HP Sbjct: 61 RDLRTPSHAAISETVNAAKKLGKQWATGLLNACLRNYQRQHTELEAQLQHNPVAGTAHPE 120 Query: 148 WLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD 207 WLL++ Q +P+ WQ I +ANNQ+ PM LR+NR SR+++L L + + D D Sbjct: 121 WLLQQYQSDWPDHWQQITQANNQQAPMMLRVNRQQASRETYLQQLLQQDIGATALRDCDD 180 Query: 208 AVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV 267 V L V+ALP FE G +VQD +AQ + L Q +HILD CAAPGGK+ HILE Sbjct: 181 GVLLSKAYDVNALPNFETGMASVQDGAAQLVVKMLDIQPDQHILDACAAPGGKSCHILEQ 240 Query: 268 APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSA 327 P+ +VA+DI +RL ++ NL RL + A +K D W + FDRIL+DAPCS Sbjct: 241 HPDNTLVALDISAERLKQIEQNLSRLQLGAQLKAADASDTDAWWDGELFDRILIDAPCSG 300 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 +GVIRRHPDIK LRR DI LA Q ++LD +WP LK G +VY TCS +EN QI+ Sbjct: 301 SGVIRRHPDIKLLRRPEDITSLAHTQQQLLDKLWPLLKADGLMVYTTCSAFKKENEQQIE 360 Query: 388 AFLQRTADAELCE----TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 AFLQR DA+ T G Q LPG + DGF+YA L ++ Sbjct: 361 AFLQRHPDAKELRFEQAPATARPYGYQRLPGDDVMDGFYYACLRRR 406 >UniRef50_Q88RR3 Ribosomal RNA small subunit methyltransferase B n=10 Tax=Gammaproteobacteria RepID=RSMB_PSEPK Length = 436 Score = 453 bits (1165), Expect = e-126, Method: Composition-based stats. Identities = 206/417 (49%), Positives = 260/417 (62%), Gaps = 6/417 (1%) Query: 18 VVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV 77 V+ SL++ LP KV ++D+ L Q+L FG R +LD L +L+ +P V Sbjct: 14 VLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQLLQKPFKAADADV 73 Query: 78 HYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFN 137 L++VGLYQL YTRIP HAA+ ETV A +K+P KGL+N VLR+ QR+ EELLA Sbjct: 74 QALLLVGLYQLFYTRIPAHAAIGETVGCADKLKKPWAKGLLNAVLRRAQREGEELLAGME 133 Query: 138 ASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAG 196 R HP WL K L+ +PEQW++I ANN PPM LR+NR HHSRD++LALL EAG Sbjct: 134 RDPVVRTAHPRWLQKALKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLALLAEAG 193 Query: 197 MKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAA 256 + D + L V LPGF +GWV+VQD +AQ L G+ +LD C A Sbjct: 194 IGASACQYSRDGIVLAEACDVRGLPGFAEGWVSVQDEAAQLSADLLELAPGQRVLDACCA 253 Query: 257 PGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ 315 PGGKT H+LE A A +VA+D++ +RL+RV +NL RL + A + D R + W + Sbjct: 254 PGGKTCHLLEAEAGLANMVAIDLEAKRLTRVRENLDRLQLDAELIACDARDTASWWDGKP 313 Query: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 F RILLDAPCSATGVIRRHPDIK R+ DIP LA LQ E+LDA+WP L+ GG L+YATC Sbjct: 314 FQRILLDAPCSATGVIRRHPDIKMTRQADDIPALATLQGELLDALWPTLEVGGMLLYATC 373 Query: 376 SVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 S LP EN+ IKAFL RT A E G + G+Q L DGF+YAKLIK Sbjct: 374 STLPTENTEVIKAFLARTPGARELDLATEAGLRQPHGRQLLAQEGGHDGFYYAKLIK 430 >UniRef50_D1BMC4 Sun protein n=3 Tax=Veillonella RepID=D1BMC4_VEIPT Length = 451 Score = 452 bits (1164), Expect = e-126, Method: Composition-based stats. Identities = 129/445 (28%), Positives = 215/445 (48%), Gaps = 20/445 (4%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLD 59 +Q+N+R +A +A+ ++ G + L QK +SD D+ EL +GV+R + LD Sbjct: 7 NQQQNIRLLAVKALSEINRNGAYANIKLQEYLQKYHLSDLDRRFFTELVYGVIRRKNYLD 66 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLI 118 +I RP+ V ++ +G+YQ++Y ++P AA+ E+V+ A + R L G + Sbjct: 67 AIIVFFAKRPIKKLSSMVLEILRLGIYQIIYMDKVPESAAVNESVKLAKKLTR-GLSGFV 125 Query: 119 NGVLRQFQRQQEEL-LAEFNASDAR-----YLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 N VLR R+ + + + E S+A Y P WL+ K ++ + N++ Sbjct: 126 NAVLRSVLRESDSISIGELAKSEAEEISFIYNQPLWLVNFWIKEMGKDKTVDLCAWFNEQ 185 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTV 230 P + RIN S + L L++ P+ V ++ + DG +T Sbjct: 186 PRLTSRINTVKVSIEDCLKELEDLDWIVEQDTYIPEVVYIDGHQGHLEKAKPVLDGHITF 245 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDN 289 D ++ + PQ GE ILD CAAPGGK+ H+ + +++ DI + +L + N Sbjct: 246 MDKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDHKLELINQN 305 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 +RLG+ K DGRY EQ FDR+L+DAPCS G++++ D++W + + + E Sbjct: 306 AERLGVSIISTKLQDGRYLPDNWKEQ-FDRVLVDAPCSGLGILQKKLDMRWRKTESLLIE 364 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP- 407 L LQ EIL+ +K G LVY+TC++ EN + FL + + P Sbjct: 365 LPPLQLEILEKASKMVKVNGYLVYSTCTMNSGENEAVLNKFLAIHKNFIIDPVSYKGAPQ 424 Query: 408 ----GKQNLPGAEEGDGFFYAKLIK 428 P + DGFF A++ + Sbjct: 425 AIDGMITTYPPRDHMDGFFMARMKR 449 >UniRef50_UPI0000E0DBE4 Putative Sun protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0DBE4 Length = 442 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 180/434 (41%), Positives = 254/434 (58%), Gaps = 10/434 (2%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 + LR+ AA + Q++E+G S L + +D+A LQE+ FG LRTL L + + Sbjct: 6 GQQLRADAAWVLFQILEKGVSSKQALAQRLEHYQGRDRAWLQEMVFGCLRTLPTLQFWLR 65 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+ +P+ G+++ + +LI++GLYQ+ Y+R+ HAA++ETV A +K LK LIN +LR Sbjct: 66 GLLDKPLKGRKKILEHLILIGLYQIAYSRVSEHAAVSETVGAADLLKGTTLKALINAILR 125 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 F R+ A + A+ P+W+ K + Y E Q +++ +NQ+ P+WLR+N H Sbjct: 126 TFIREDVANTAP-ESLAAQAGMPNWIFKAINNHYAEHAQLVIDESNQKAPLWLRVNPAHI 184 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 S + L G+ +PDAV+ V PG++ GW VQD +AQ L Sbjct: 185 SPEGMQTQLQAMGIDTELKNTHPDAVQCLKSGDVTQFPGYDKGWFAVQDGAAQLAAQLLD 244 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQ-VVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 Q G +LD CAAPGGKT HIL PE + VA+D D RL RV +NL RLG +AT+ Sbjct: 245 VQPGHRVLDCCAAPGGKTAHILASQPELEECVAIDNDPSRLVRVEENLARLGHEATLICA 304 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 W G + FDRILLDAPCSATGVIRRHPDI+WLR+ DI L +Q+E+L +W Sbjct: 305 AAEDVEGWYGGEPFDRILLDAPCSATGVIRRHPDIRWLRQASDIAPLVAIQAELLMQMWQ 364 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE--------TGTPEQPGKQNLPG 414 L+ GG L+YATCS+LPEENS QI+ F+ + +A + T ++ G Q LPG Sbjct: 365 ILQPGGKLLYATCSILPEENSQQIQTFIAQHPEAVVLPIPTSLSELTTVNDEFGLQVLPG 424 Query: 415 AEEGDGFFYAKLIK 428 + DGF+Y L K Sbjct: 425 DADMDGFYYTLLQK 438 >UniRef50_A0LEK0 Sun protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEK0_SYNFM Length = 449 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 146/445 (32%), Positives = 216/445 (48%), Gaps = 22/445 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 N R +A Q + + ++ + +++ ++D+ALL EL +GVLR +LDW I Sbjct: 3 NARVLAFQILLHMDRDASHPDRLIRGMLGRHERLEERDRALLTELVYGVLRWQGRLDWHI 62 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 ++L V L+ + LYQ+L RIP HAA+ E V A + L +NGV Sbjct: 63 DQLSRTRPEKIDPAVRILLRLALYQILMLDRIPDHAAVNEAVNMAKTTQPAYLVKFVNGV 122 Query: 122 LRQFQRQQEE-LLAEFNASDARY-----LHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 LR+ R++ + E +Y HP W ++RL + E+ I ANN PM Sbjct: 123 LREALRRRSRWIWPEAGEEPGKYIAVTTAHPIWYVERLLHEFGFEETLDICNANNTVAPM 182 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDA 233 LR+N S D+ L E G+ P P AVRL + + DG V VQD Sbjct: 183 TLRVNALKTSIDTILQWCAEHGIDAEPSGVVPTAVRLSGLRRDLAETSIYRDGLVQVQDE 242 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKR 292 ++Q T +AP+ GE +LDLCA GGK+TH+ + +VVAVD +L + N +R Sbjct: 243 ASQIVSTLVAPRAGERVLDLCAGFGGKSTHLGILMGDRGEVVAVDNSAWKLEELRKNARR 302 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 G++ + + E FDR+LLDAPCS G +RR+PDIKW R +D ++ Sbjct: 303 QGLRIIKPRTADLFEFSPGTEDLFDRVLLDAPCSGFGTLRRNPDIKWRRHLKDPRRFGRI 362 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-------- 404 Q E+LD +K GG LVY+ C++ EEN + F D ++ G Sbjct: 363 QKEMLDHAARFVKPGGALVYSACTLFQEENDAVAEHFAASHPDWQIEPVGPDLPDACRGM 422 Query: 405 -EQPGKQNLPGAEEGDGFFYAKLIK 428 P + P + DGFF A+L + Sbjct: 423 ASGPFFRTWPHRHQVDGFFAARLKR 447 >UniRef50_B8FS79 Sun protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FS79_DESHD Length = 453 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 130/452 (28%), Positives = 217/452 (48%), Gaps = 26/452 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLD 59 M K + R++A Q + ++ E+ + ++ +SD +++ L L G L+ LD Sbjct: 1 MDKITS-RALAVQILRRIEEEKAYANLVMQKALHDLSDPRERQLATLLVNGTLKHRLTLD 59 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLI 118 + + + + +P++ V +++ + Q+LY RIP A+ E VE + + L+ Sbjct: 60 YALRRHLRKPLSQLPHEVRWILRISALQILYLSRIPAAVAINEGVELTKKQQG-KYTSLV 118 Query: 119 NGVLRQFQRQQEELLAEFNASDA------RYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 N VLR+ ++L + RY HP W++KR K Y +++ +ANN+ Sbjct: 119 NSVLRRVLETGWDMLWPSKEKEPVRFLSLRYSHPEWMVKRWLKRYGMADTEALCQANNEP 178 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P+W+R N SR A L+ G+K P+++ +E + LP F++G TVQ Sbjct: 179 APVWIRTNTLKISRADLQARLEGEGVKVTIGERVPESLVIEDFGSLDKLPSFQEGHFTVQ 238 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 D S+Q L PQ G+ +LD C APGGKTTH+ + + +++A DI ++ + D Sbjct: 239 DESSQLIAHVLNPQAGQKVLDACGAPGGKTTHLAQRMENQGEILAFDIHPHKVKLIEDLA 298 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ Q + ++L+DAPCS GV+RR D++W + + +I L Sbjct: 299 ARLGITIIRAQAGDARELAGVKDASCHKVLVDAPCSGLGVLRRRADMRWHKEEDEIKTLP 358 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT------- 403 LQ IL+ + GG LVY+TC++ PEEN +KAF + + Sbjct: 359 ALQLAILERAAQCVAAGGELVYSTCTIEPEENFEVVKAFRANHPEFITVDFSGELPYSLA 418 Query: 404 -------PEQPGKQNLPGAEEGDGFFYAKLIK 428 + Q LP + DGFF AK + Sbjct: 419 SEQDRKQAAKGFLQILPHKQGMDGFFLAKFRR 450 >UniRef50_B1YIQ1 Sun protein n=2 Tax=Exiguobacterium RepID=B1YIQ1_EXIS2 Length = 446 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 135/441 (30%), Positives = 215/441 (48%), Gaps = 20/441 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R A + ++ + G + + + +K +S D L EL +G L LD+++ Sbjct: 2 NVRDAAVTTLLKIGQGGAFSTISVHQMLEKRAISKADVGLYTELVYGTLSRELTLDYILE 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + + L+ + +YQL Y RIP HA + E VE A +P + ++NGVL Sbjct: 62 PFLTKQ-KKLDPFMRPLLRMSVYQLFYLDRIPDHAVINEAVEIAKTRGKPHIAKVVNGVL 120 Query: 123 RQFQRQQEE----LLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLR 177 R R + + + + HP WL+KR + + E+ + NN+ P+ +R Sbjct: 121 RNVLRTGKPDFSAIPSTVDRISIETSHPVWLVKRWLELFGEEETWKMCRLNNEPAPVTVR 180 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 +NRT + + LL+E G+ P PD + + + V E G++++QD S+ Sbjct: 181 VNRTRTDQQEAIVLLEEQGVIAKPAHAAPDGLEIVSG-SVQQTDLLERGYLSLQDESSML 239 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 L Q +H+LD CAAPGGK HI E +VA+D+ ++ + RLG+ Sbjct: 240 VAAALGAQPTDHVLDSCAAPGGKAMHIAEGLATGSLVALDLHPHKVKLLEKQATRLGLHN 299 Query: 298 TVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 + D R FDRIL+DAPCS GVIRR PDIKW +R D+ +L +Q +I Sbjct: 300 VQAEALDARQAGTRFETASFDRILVDAPCSGLGVIRRKPDIKWTKRPEDLTQLPVIQRQI 359 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ---------RTADAELCETGTPEQP 407 L+A+ P +K GT VY+TC++ P EN Q + L +T E ++ E+ Sbjct: 360 LEAVLPLVKPDGTFVYSTCTMDPLENEQQTEFILSQGFVFDETFKTRMPEAVQSLIGERA 419 Query: 408 GKQNLPGAEEGDGFFYAKLIK 428 + LP + DGF+ A K Sbjct: 420 ELKLLPTSLGTDGFYIAAFKK 440 >UniRef50_B8KLT3 Ribosomal RNA small subunit methyltransferase B n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KLT3_9GAMM Length = 433 Score = 449 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 196/435 (45%), Positives = 262/435 (60%), Gaps = 8/435 (1%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK +R+ AA+ + +V+ +G SL L + +D+ L +E+CFG LR +LD Sbjct: 1 MKPGAAVRACAARIIAEVL-RGDSLDRALESHLTILPGRDQPLCREICFGTLRQYPRLDA 59 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L+ +L+ +P+ K R VH L + GLYQL RIP HAA++ TV+ A +K+ QL GL+N Sbjct: 60 LLGQLLQKPLRAKDRDVHALALAGLYQLTSMRIPAHAAVSATVDAATVLKKRQLSGLLNA 119 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLR+FQR++E LLA + + A HP WL L + +PE + I ANN PPM LR+N Sbjct: 120 VLRRFQREEEALLAALSDAQAS-AHPDWLWNALGQHWPEHREQIARANNSYPPMTLRVNL 178 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + RDS+L L +AG+ P P A+ LE V LPGF +G +VQD +AQ Sbjct: 179 SRVDRDSYLQQLADAGITAHPGRLSPAALTLEQAVDVTLLPGFAEGLCSVQDEAAQLAAQ 238 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 LAP+ GE ILD CAAPGGK+ HILE P +A + A+DI E+RL RV +NL RLG+ AT+ Sbjct: 239 LLAPRPGERILDACAAPGGKSCHILEQLPSDASLTAMDISEERLHRVQENLDRLGLAATL 298 Query: 300 KQGDGRY-PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 GDG + P+ FD +LLD PCSATGVIRRHPD+K LRR+ D A Q IL+ Sbjct: 299 IVGDGGHPPTALVDRGPFDAMLLDVPCSATGVIRRHPDVKVLRREEDAVSFAAQQRAILN 358 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----LCETGTPEQPGKQNLPG 414 +WP L GG L+Y TCS+LPEENS + FL R +DA + G Q LP Sbjct: 359 GLWPLLAPGGRLLYVTCSLLPEENSQAVAEFLARQSDASEEALHVASAQACAQGLQLLPD 418 Query: 415 AEEGDGFFYAKLIKK 429 DG ++A L K+ Sbjct: 419 VSGTDGLYFAMLRKR 433 >UniRef50_C0WD86 SUN protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD86_9FIRM Length = 445 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 131/444 (29%), Positives = 214/444 (48%), Gaps = 17/444 (3%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQL 58 M +N R +A ++++ E+G + L + +S D+ L EL +G ++T L Sbjct: 1 MHDAQNPRELALLVLDEIYERGAYANLALNKALRGNGLSSLDRKLCTELVYGTVKTTGTL 60 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 DW + +++ RP + ++ +G YQ+LY RIP AA+ E A L Sbjct: 61 DWYLCRVINRPFRKMAPRLRTILRMGAYQILYLERIPDSAAVNECANLARYYVNENSVKL 120 Query: 118 INGVLRQFQRQQEELLAEFNASDAR------YLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +NGVLRQ R + DA Y HP WL++R + + + +++ +N Sbjct: 121 VNGVLRQLSRTKATWQFPQKEEDATLRLALTYYHPEWLVRRWKFRFGLPEAEAMCAYDNA 180 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P + LR+N SR + L L G + P PD + + L ++ + Sbjct: 181 VPSLCLRVNTLFISRKTLLERLQADGCEVEPSKWSPDGIVCRHLPSLETLMKEWGRFLYI 240 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDN 289 QD S+ LAP+ G+ +LD CAAPGGKTTH+ + + + +++A+DI + RL+ + +N Sbjct: 241 QDESSMLDADVLAPKPGDLVLDFCAAPGGKTTHLAQKMENKGKIIAMDIHDHRLTLIEEN 300 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 RLG+ DG P E + D +L+DAPCS GV+ R + +W +++R + + Sbjct: 301 ATRLGITNIRALLHDGTKPLP-GFENRADAVLVDAPCSGLGVLNRRAEARWTKKERTLSQ 359 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----LCETGTP 404 LQ +IL +K GG L+Y+TC++ +ENS AFL+ + L Sbjct: 360 FPPLQKKILAQAAACVKPGGRLLYSTCTLERDENSRVRTAFLESHPEFRSKAFLHPVTGE 419 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIK 428 Q LP + DGF+ A K Sbjct: 420 RVEELQILPWRDGIDGFYLALFEK 443 >UniRef50_B4WR53 Ribosomal RNA small subunit methyltransferase B n=4 Tax=Cyanobacteria RepID=B4WR53_9SYNE Length = 491 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 147/458 (32%), Positives = 227/458 (49%), Gaps = 35/458 (7%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ----------KVSDKDKALLQELCFGVL 52 K + R +A +A+ + ++QG ++ + ++S +DK L+ EL +G + Sbjct: 34 KPKTARQIAFEAL-RAIDQGAFADVVIDRKLKGTQTGTQLGIQLSSQDKGLVTELVYGSV 92 Query: 53 RTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKR 111 R LD LI++ RP + + R + ++ +G YQL Y +P HA + TV+ A + + Sbjct: 93 RRRRTLDALIDQFGKRPASKQHRDLLQILRLGFYQLRYLDHVPVHAVVDTTVQLAKSQRL 152 Query: 112 PQLKGLINGVLRQFQRQQEE----LLAEFNASDAR-------YLHPSWLLKRLQKAYPEQ 160 +L G++N +LRQ+ R+ + + R + +P W++ + P+ Sbjct: 153 GKLSGVVNAMLRQYAREAMPAANVIADPLKLPEERTRRLGILHSYPDWIIDVWRSMLPDD 212 Query: 161 -WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVH 218 +++ E N+ P + LRIN S + +AL +AG++ P P A+RL T V Sbjct: 213 QVEALCEYFNRSPYLELRINLQRQSLSAAIALFADAGIEALPIEGVPSALRLTTHAGAVT 272 Query: 219 ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVD 277 LPG+ +GW VQD+SAQ L PQ GE I+D CAAPGGK+ HI E+ E V + D Sbjct: 273 QLPGYAEGWWAVQDSSAQLVSYLLDPQPGEVIIDACAAPGGKSLHIAELMRNEGTVWSCD 332 Query: 278 IDEQRLSRVYDNLKRLGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPD 336 R ++ N+ RLG GD R + G+ DR+LLD PCS G + RH D Sbjct: 333 RTSSRTKKIQQNIDRLGATIVRPIMGDSRNQPTFLGQG--DRVLLDVPCSGLGTLNRHAD 390 Query: 337 IKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA 396 +W + + L LQ EIL +K GG LVYATC++ P+EN QIK FL + A Sbjct: 391 ARWRQTPDSVDSLVTLQQEILMHASTWVKPGGVLVYATCTLHPQENEAQIKTFLSQNAGW 450 Query: 397 ELCE------TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + E + P + DGFF KL + Sbjct: 451 TIEAPPPSFGIEPTEAGWIKVWPHIQHMDGFFIVKLRR 488 >UniRef50_C7RA09 Sun protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA09_KANKD Length = 443 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 185/433 (42%), Positives = 258/433 (59%), Gaps = 10/433 (2%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 + LR A A+ + +G+S +++L +Q + D +L + L G R +L+ + Sbjct: 11 NSQQLRQQACLALHAIAFEGRSANDVLNSIQFE-QGSDNSLFRALVLGSCRYFIRLESIA 69 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 +L+ +P K + + LI++GLYQL Y+R+P HAA++ETV +K+P L+NGVL Sbjct: 70 KQLLQKPFKPKDQDLLCLIIIGLYQLEYSRVPDHAAISETVSVCEQLKKPWATKLVNGVL 129 Query: 123 RQFQRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 R F RQQ ELL++ +++ D R+ P WL+ L+ Y Q +S++EA NQ+ PM LR+NR Sbjct: 130 RNFVRQQPELLSQADSNWDTRFAMPDWLISVLKPYYKGQMESLMEAINQQAPMTLRVNRQ 189 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 RD +L LL E G+ H A+ LE P V LP F DG+V+VQDA+AQ Sbjct: 190 RIGRDQYLELLLEQGLPASTHPIATSALVLEHPVSVEQLPHFSDGYVSVQDAAAQLAAGI 249 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 LAP +LD CAAPGGKT H+LE+ + A D+D +R R+ +NL RL + A + Sbjct: 250 LAPPPHSIVLDACAAPGGKTCHLLELCDSIALTACDVDHERCQRISENLLRLDLSAKLDC 309 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 D + + FD ILLDAPCSATGVIRRHPDIK LR DI +L QLQ +IL+ +W Sbjct: 310 QDLTDSN--YPDNHFDAILLDAPCSATGVIRRHPDIKLLRHASDIDQLVQLQQQILEHLW 367 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG------TPEQPGKQNLPGA 415 LK GG L+YATCS+LP+EN QI FL+R DA+L + + G Q +PG Sbjct: 368 CKLKAGGRLLYATCSILPQENEQQITHFLERHKDAKLVSLSEQIQNLSHTKTGCQLIPGQ 427 Query: 416 EEGDGFFYAKLIK 428 DGF+YA L K Sbjct: 428 LSMDGFYYALLEK 440 >UniRef50_C4V0R0 rRNA SAM-dependent methyltransferase RmsB n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0R0_9FIRM Length = 449 Score = 446 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 136/444 (30%), Positives = 219/444 (49%), Gaps = 18/444 (4%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLD 59 K +R A Q + ++ +G + L + +++++D+ L EL +G ++ LD Sbjct: 8 NKIDRIREQAMQVLLRIHSEGAYANVALAEELRIAQMTERDRRFLTELVYGTVKAGETLD 67 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLI 118 ++I + +A + Q + L+ +G YQ+ + +IP A VE A + Sbjct: 68 YMIRRYVA-DLKKAQPPIRELLRLGFYQIFFMDKIPSSAVCHTAVELAKKHGGKGAASFV 126 Query: 119 NGVLRQFQRQQEELLA----EFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 NGVLR R+ + + + R HP W+++R + Y E+ +++ +N+ P Sbjct: 127 NGVLRTALREPKRAALPQGHDARSLALRMQHPVWMVERWLRDYGSERTETLCRCDNESAP 186 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 + LR N SR + + L AG++ P++V L + AL +G VQD Sbjct: 187 LTLRTNTLRTSRTALIERLTAAGVRAEASLRVPESVLLHAHGALDALAPLREGLAQVQDE 246 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKR 292 S+ L + G ++D CAAPGGKTTHI + ++ A DI E++L R+ N +R Sbjct: 247 SSMLVAHVLGAEPGMTVIDACAAPGGKTTHIAQRMENRGRIWAFDIHEEKLRRIMRNAER 306 Query: 293 LGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+ Q D R G DR+L+DAPCS GV+RR PD +W + D+ L Sbjct: 307 LGISIIETQLLDAREVGAHYG-VCADRVLVDAPCSGLGVLRRKPDARWRKTPSDVKTLPP 365 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG--TPEQP-- 407 LQ IL + +K GG LVY+TC++ EN+ ++AFL+ D L ETG PEQ Sbjct: 366 LQLAILASAARTVKQGGVLVYSTCTMERSENTAVVEAFLRGHEDFVLEETGAFLPEQKTA 425 Query: 408 --GKQNLPGAEEGDGFFYAKLIKK 429 Q +P DGFF A++ ++ Sbjct: 426 ERMVQIMPETGGPDGFFIARMRRR 449 >UniRef50_B2IXU2 Sun protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IXU2_NOSP7 Length = 487 Score = 446 bits (1148), Expect = e-124, Method: Composition-based stats. Identities = 148/483 (30%), Positives = 225/483 (46%), Gaps = 63/483 (13%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R +A A+ V +G L + QK + D+D+ L+ EL +G +R LD LI+ Sbjct: 3 NPRQLAFIALRDV-HKGAYADVALDRVLQKVNLPDRDRRLVTELVYGSVRRQRTLDTLID 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + + + ++ +G YQL Y RIP AA+ TV+ A L G +NG+L Sbjct: 62 QFAKNKSHQQPQDLRTILHLGFYQLRYQERIPASAAVNTTVQLAKENGFSGLTGFVNGLL 121 Query: 123 RQFQR-------------------QQEELL-------------------------AEFNA 138 RQ+ R +++ LL Sbjct: 122 RQYLRKAGEQGGRGAGGQRSRGAEEKDSLLVPVPQPPVPSTQAPVLNFDPLQLPENPVER 181 Query: 139 SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGM 197 + P W+++ + + + + E NQ P + LRIN S + A L G+ Sbjct: 182 LGILHSFPDWIIQVWLEQLGLTETEQLCEWMNQSPTIDLRINPLCTSIEEVEAALQSVGL 241 Query: 198 KGFPHADYPDAVRLETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAA 256 D P A+R + LPGF++GW TVQDASAQ L PQ GE ++D+CAA Sbjct: 242 LVRRIPDLPQALRFMGNTGSIQKLPGFKEGWWTVQDASAQLVSHLLDPQPGEVVIDVCAA 301 Query: 257 PGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQ 314 PGGKTTHI E+ + ++ A D RL ++ +N +RL +++ + GD R+ +Q+ + Sbjct: 302 PGGKTTHIAELMADSGKIWACDRTASRLRKLQENSQRLNLQSIQIYTGDSRHSNQF--QN 359 Query: 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 DR+LLDAPCS G + RH D +W + + EL+ LQ E+L +K GG LVYAT Sbjct: 360 TADRVLLDAPCSGLGTMHRHADARWRQTPESVRELSVLQKELLTHTSTFVKAGGVLVYAT 419 Query: 375 CSVLPEENSLQIKAFLQRTADAELCETGTPE---------QPGKQNLPGAEEGDGFFYAK 425 C++ P EN I AFL + ++ E Q + P ++ DGF + Sbjct: 420 CTLHPAENEEVISAFLAESPHWQIEPPRGIELAASAYSTPQGWFKVWPHRQDMDGFLMVR 479 Query: 426 LIK 428 L K Sbjct: 480 LRK 482 >UniRef50_Q3AC21 Sun protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AC21_CARHZ Length = 440 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 139/440 (31%), Positives = 217/440 (49%), Gaps = 20/440 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINK 64 NLR + + + +V + ++ +LP L ++ K DK + EL +GVL+ L LD++ K Sbjct: 2 NLRELVIKTLVEVEKNNSYVNLLLPKLIANLAKKEDKDFVVELTYGVLKQLKLLDYMAGK 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+ + + V I VGLYQL + ++P +AA+ ETVE R G++NGVLR Sbjct: 62 LLKKR-SKLPPFVINAIRVGLYQLYFLDKVPTYAAINETVEAVKRNYR-GFTGVVNGVLR 119 Query: 124 QFQRQQEELL-----AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 F R++EE+ E Y HP W++KR Y + I++ NN +P + LR Sbjct: 120 NFIRRREEITKIDVSDEVEYLAIAYSHPEWMVKRWLNQYGYTKTVEILKYNNHQPNLTLR 179 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 IN S ++ LL+E + P+ V + V LPG+++G +QD + Sbjct: 180 INTLKISPKAYCDLLNEKNINFKQLPYLPEGVVILDKVGVKELPGYDEGLFYIQDTGSMF 239 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 + P+ +D CAAPGGK+TH+ ++ + + A D+ RL + +N RLG+ Sbjct: 240 IAYLINPEPNSVGIDACAAPGGKSTHLAQLMGNKGIIYAFDVHPGRLKLIEENAHRLGIN 299 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 + + IL D PCS TGV+ R PD +W + + +I +L+Q Q EI Sbjct: 300 IIRCLLGDATRLKLPDGVNPNWILADVPCSGTGVLARKPDARWQKSEEEIIKLSQYQLEI 359 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG--------TPEQPG 408 L + L G LVY+TCS+ PEEN ++ FL++ + L + Sbjct: 360 LTNLSKLLPPEGILVYSTCSIEPEENEGVVENFLRKNPNFVLVKPPEWFFNLGIVKNNYY 419 Query: 409 KQNLPGAEEGDGFFYAKLIK 428 + LPG GDGFF L K Sbjct: 420 LRLLPGEI-GDGFFGVILKK 438 >UniRef50_B2A2K5 Sun protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2K5_NATTJ Length = 462 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 134/457 (29%), Positives = 231/457 (50%), Gaps = 31/457 (6%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDW 60 K ++ R +A A ++++ + +L L K + +DKAL + +G L+ +D+ Sbjct: 2 KIKSSRELAFVAYTRIIQDQAYSNLVLNQLLGKTDLLAQDKALASRITYGTLQWQGLIDY 61 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLIN 119 + L RP++ +L+ +G YQ+L+ R+PP A++ ETV+ A + +N Sbjct: 62 YLKTLSHRPLSKLSNKALFLLRMGAYQILFLDRVPPSASVNETVKVAHRRTHKGIANFVN 121 Query: 120 GVLRQFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 G+LR R+++++L D +Y HP W++K Y ++ SI++ NN P Sbjct: 122 GILRNLIRKKDQILLPSRDQDLLNYLSVKYSHPYWMVKLWYDKYGLDKTISIMDQNNSTP 181 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 +R+N+ S ++ L+ G++ + DA+ ++ ++ F G+ VQD Sbjct: 182 EEAIRVNKLLTSLENLKNELEMTGIQSRLSSKIDDALLVDNLGDLNNNTLFNCGYFQVQD 241 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLK 291 ++ PQ G++I+DLC+APG KTTH++++ + ++AVDI E RL V + + Sbjct: 242 INSMVVSHLCDPQQGDNIIDLCSAPGSKTTHLVQLIDGQGSILAVDIHEHRLKLVKEACR 301 Query: 292 RLGMKAT-VKQGDGR-------YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 RL + VKQ DG + + QFD L+DAPCS G +R+ P++KW + Sbjct: 302 RLQVNNVNVKQADGTKLISRDQQENNKQLKGQFDLCLIDAPCSGLGTLRKRPELKWTISE 361 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT 403 +D+ L+ LQ ++L A +K GGTLVY+TC++ P+EN QI FL+ D + Sbjct: 362 QDLNSLSTLQGKLLKAGSQLVKPGGTLVYSTCTINPQENEDQINDFLKNHPDFVMESPRA 421 Query: 404 P------------EQPGKQNLPGAEEGDGFFYAKLIK 428 Q P GDGF+ A++ K Sbjct: 422 ILKEDTLQGGMILSNNSLQYFPELNLGDGFYGARMKK 458 >UniRef50_A6NUS8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUS8_9BACE Length = 447 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 133/442 (30%), Positives = 208/442 (47%), Gaps = 18/442 (4%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLI 62 + R A A+ QG L ++ + +D AL LCFGVL+ LD+ I Sbjct: 6 QTARETALLALSACERQGAWSDGFLKKTLREAGLDSRDAALATRLCFGVLQNRLLLDFYI 65 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIA-IKRPQLKGLING 120 K + V + +G+YQ+ + +IP +AA+ E+VE K P+ G++NG Sbjct: 66 GKFSTTRPEKMEIKVRNALRLGVYQMAFMTKIPHNAAVNESVELTKKHCKNPRAAGMVNG 125 Query: 121 VLRQFQRQQEELL-----AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 VLR R + L + RY HP WL++ E+ ++++EA+N +PP+ Sbjct: 126 VLRNVSRNIDRLPVIESGSREEYLSIRYSHPLWLVREFTALLGSEEAEALLEADNGQPPI 185 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 +IN + + L L EAG++ PH D + L + L F +G +QD + Sbjct: 186 TAQINTCRATMEQTLERLAEAGVEAQPHPWLADCLVLSGTGNLEHLTAFREGLFYIQDPA 245 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 A+ + P+ G +LD CAAPGGKT + E ++ + DI + + +RL Sbjct: 246 ARLAVEVADPKPGMKVLDACAAPGGKTFASAIRMGGEGEIQSCDIHAHKEKLIQAGAERL 305 Query: 294 GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 G + E FD ++ D PCS G+IR+ PDI++ + + L +Q Sbjct: 306 GFNCIKTAVMDGKKHRPAFENAFDVVIADVPCSGLGIIRKKPDIRY-KDPEPLEGLPAVQ 364 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK---- 409 S ILD + ++K GG L+YATC++L EN ++ FL R D L + PE G+ Sbjct: 365 SAILDNVATYVKPGGVLLYATCTLLERENGDVVRGFLDRNKDFTLEKFQLPEPLGRADNG 424 Query: 410 --QNLPGAEEGDGFFYAKLIKK 429 P DGFF AKL + Sbjct: 425 MFTFWPQRHGTDGFFIAKLRRN 446 >UniRef50_B8FHH2 Sun protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHH2_DESAA Length = 455 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 134/454 (29%), Positives = 223/454 (49%), Gaps = 25/454 (5%) Query: 1 MKK---QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRT 54 MK + R AA+ ++++ Q L +L K ++ KD+AL+ L +GVLR Sbjct: 1 MKPPAGKDKSRITAARILDRLESGDQVLDVVLDRALDKEPGLTRKDRALVMALVYGVLRN 60 Query: 55 LSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQ 113 ++DW+I+ + Q + ++ +G++QLL+ R+PP A+ +VE A Sbjct: 61 RGRIDWIISSFSKTKLKKIQPEILNILRMGVFQLLFLDRVPPALAVDSSVEMAKKAAPVF 120 Query: 114 LKGLINGVLRQFQRQQEEL------LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVE 166 + +NG+LR +R+ L A +P W++KR K + E+ + + Sbjct: 121 VSKFVNGLLRNVERKGRGLQLPDFAKDPLKAICVAESYPEWMVKRWIKRFGAEETLELCK 180 Query: 167 ANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP-APVHALPGFED 225 A N+ P+ +R+N +RD + + H P A+ P PV LPGF + Sbjct: 181 AGNRIAPITIRVNSLAATRDEAADEIRDQVKNLELHDWPPMALSFSAPLVPVFELPGFSE 240 Query: 226 GWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLS 284 G +VQDA++Q L P+ GE +LD CA G KT+HI ++ +++A D++ +L Sbjct: 241 GKFSVQDAASQMTALCLDPRPGEKVLDACAGLGSKTSHIAQLMENTGEILAADLEPGKLK 300 Query: 285 RVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 ++ + + RL + Q FD++L+DAPC+ GVIRR+PD KW + Sbjct: 301 KLEEEMARLKVSIVKTHALDFTRELSLEPQGFDKVLVDAPCTGLGVIRRNPDSKWSKTLN 360 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP 404 I + A+LQ IL ++ GG ++Y+ CS+ PEE IKAFL+ D L + P Sbjct: 361 SIHKHAKLQGMILSRAAELVRPGGLILYSVCSMEPEETDGVIKAFLRNNEDFTLEPSPLP 420 Query: 405 ---------EQPGKQNLPGAEEGDGFFYAKLIKK 429 EQ + P + DGFF A++ ++ Sbjct: 421 KDGDQTMLDEQGCMRTFPHRQGMDGFFAARMRRR 454 >UniRef50_Q3A7Z0 Sun protein n=2 Tax=Desulfuromonadales RepID=Q3A7Z0_PELCD Length = 451 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 143/449 (31%), Positives = 217/449 (48%), Gaps = 26/449 (5%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQLDWL 61 ++ R +A +++V G L Q + D +D+AL EL +GVLR +LD+ Sbjct: 4 QDPRHIAFDILDKV-HNGAFADLALDSALQALPDMDVRDRALATELVYGVLRYRGRLDFA 62 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLL-YTRIPPHAALAETVEGAIAIKRPQLKGLING 120 + +L +P+ + V L+ +G YQ+L RIP HAA+ ETVE A +K + G ING Sbjct: 63 LQQLCRKPLAKVEPAVLNLLRLGCYQILQLDRIPNHAAVFETVELARRLKLQRATGFING 122 Query: 121 VLRQFQRQQEELLAEFNASDAR------YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 +LR RQ +L D P WL R + E+ ++ +A + P Sbjct: 123 ILRGLVRQAAQLPWPDRQRDPLDYLEHVLSLPRWLAARWLDEFGAEEACALAQAMLKPAP 182 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 +R N R++ LA L+ + P P+ + + H L G +G +QD Sbjct: 183 YAIRTNTLKIQREALLATLNASDCDAVPTRFVPEGIYIRQGETRH-LSGHTEGIFQLQDQ 241 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKR 292 ++ L PQ GE ILD CAAPGGKTTH+ + A++VA+D+ QR+ + R Sbjct: 242 ASMLISHLLNPQPGERILDACAAPGGKTTHMAALTDNRARIVALDLHPQRVDLITRGANR 301 Query: 293 LGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG + D + FDRIL+DAPCS GV+RR+P+I+W R+ D+ E+A+ Sbjct: 302 LGCQGIEGHAWDLTGVPDFLEPASFDRILVDAPCSGLGVLRRNPEIRWRRKPADLKEMAR 361 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG--------- 402 +Q IL + P L+ GG LVY+ C+ PEE I+AF + C+ Sbjct: 362 IQRAILGNVAPLLRPGGRLVYSLCTFSPEETQNVIRAFTNEHPEFTRCDLRNETPAAWHA 421 Query: 403 -TPEQPGKQNLP-GAEEGDGFFYAKLIKK 429 Q + LP ++ D FF K+ Sbjct: 422 LFDRQGALRTLPQHHDDMDAFFAVAFEKQ 450 >UniRef50_B9ZKR1 Sun protein n=2 Tax=Chromatiales RepID=B9ZKR1_9GAMM Length = 451 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 192/435 (44%), Positives = 252/435 (57%), Gaps = 10/435 (2%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 R+ R A +A E VV QG SL+ + + ++ +D A +Q L + LR QL L+N Sbjct: 16 SRSPRQRALEAAEGVVLQGHSLTRAVEHATEGLNARDAAWVQALAYTTLRWYPQLSALVN 75 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + RP+ K + L+ GL +L++ HAA+ ET E A AI RP GLIN VLR Sbjct: 76 GFLERPLRKKDAVIGVLLAQGLAELMHFSTRDHAAVRETAELARAIHRPGAVGLINAVLR 135 Query: 124 QFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 + QR+Q+ L A A R+ P WLL+ ++ ++P+ W++++EA + PM LR+N + Sbjct: 136 RAQREQDALEAAVREDPALRFAVPEWLLETIRASWPDDWETLLEAATRPAPMTLRVNLSR 195 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 SR+ L L AG H A+ L+ PA V LPGF +G ++VQDASAQ L Sbjct: 196 TSREEALQALVAAGHPAQAHPQLEAALTLDEPADVAQLPGFAEGRLSVQDASAQWAAVLL 255 Query: 243 APQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 PQ GE +LD CAAPGGKT H+LE + Q+ A+D D +RL +V +NL RLG A + Sbjct: 256 DPQPGERVLDACAAPGGKTGHLLERAGGDLQLTALDSDAERLVQVRENLDRLGFAAQLTA 315 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 D P W + FD ILLD PCSATGVIRRHPDIK LRR DIP LA Q+ IL+A W Sbjct: 316 ADVADPDAWWDGRPFDAILLDVPCSATGVIRRHPDIKTLRRADDIPRLAAEQARILEAAW 375 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE-LCETGTPEQPGKQ------NLP- 413 L+ GG L+YATCS+L EEN + FL+R DA L G P G LP Sbjct: 376 GLLRPGGRLLYATCSLLSEENDAVVAGFLERMPDARALEPEGGPPIAGAHARSVGWALPL 435 Query: 414 GAEEGDGFFYAKLIK 428 G E GDGF+YA L K Sbjct: 436 GLEGGDGFYYALLTK 450 >UniRef50_A1AVP0 Sun protein n=1 Tax=Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) RepID=A1AVP0_RUTMC Length = 421 Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats. Identities = 166/426 (38%), Positives = 242/426 (56%), Gaps = 16/426 (3%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R +A +A+ V+ +SLS D D L++ L FG +R QL+ +++K + Sbjct: 6 TRFIALEAIYSVIINKKSLS-----AFNYPKDNDTPLIKSLVFGTIRFYHQLNDIVSKRL 60 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 + VH L+++G YQLLY++I HA++ ETV A+ +P K L+N +LR+ Sbjct: 61 KHSFKKEDLDVHCLMLLGAYQLLYSKIAIHASIFETVNVVNALNKPWAKALVNAILRKID 120 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 R ++ L Y HPSWL+K++++ YP +++I + NN + PM +R++ + + D Sbjct: 121 RDKKIL-----QQQVHYSHPSWLVKKIKRDYPNDFETIFKQNNTQAPMTIRVHTS-LNLD 174 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 + L + G+ A P A+ L+ V L FE G VQDASAQ + L P+N Sbjct: 175 HYQQQLQQEGISSQKLAITPQALVLDKATTVFNLVKFEQGACYVQDASAQLSVPLLNPKN 234 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 + ILD C+APGGK TH+ E+AP+ +V+A+D D +RL ++ N +RL + Sbjct: 235 TDLILDACSAPGGKATHLCELAPQCKVIALDNDNKRLIKISQNAQRLKITNIQTILGSAQ 294 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 W Q FD+IL DAPCSATGVIRRHPDIK LR+ +DI L LQ IL+ +W LK Sbjct: 295 NQDWWDSQLFDKILFDAPCSATGVIRRHPDIKLLRKPKDITTLVVLQKNILENLWQMLKP 354 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEEGDGFF 422 G L+YATCS+L EN QIK FL DA+ + G G+Q LP + DGF+ Sbjct: 355 SGILLYATCSILKVENEQQIKYFLNTHYDAKEIKIELDWGINTTVGRQQLP-TDNFDGFY 413 Query: 423 YAKLIK 428 YAK+IK Sbjct: 414 YAKIIK 419 >UniRef50_C9LLK5 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK5_9FIRM Length = 454 Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats. Identities = 129/444 (29%), Positives = 215/444 (48%), Gaps = 18/444 (4%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLD 59 +K ++ R++A +A+ ++ E+ + + + + + +++ LL EL +GV R + Sbjct: 7 EKIKSARTLAFEALYEIFEKNAYANLTIQSILRWCPLKKEERHLLTELIYGVCRKYNYCL 66 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 W+I+ + RPM V L+ +G+YQ+++ RIP AA+ ETV+ A + I Sbjct: 67 WMISLISDRPMFKIHPAVRILLALGIYQIVFLDRIPESAAVNETVKIAKKVTHIGNVKFI 126 Query: 119 NGVLRQFQRQQEELLAEFNAS------DARYLHPSWLLKRLQKAYPE-QWQSIVEANNQR 171 NGVLR F R++ L S Y P WL++ +K Y Q + I++A N Sbjct: 127 NGVLRNFLRRRGSLTLPDRTSNRVFYESLIYNQPEWLIRFFEKEYGMGQSEKILKAFNTI 186 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 +R+N D L + + P+A+ ++ + + G + +Q Sbjct: 187 SDTCIRVNTLKIETDDIKKQLKLRNISVGDISYMPEALAIKAGTDILFSEFLQTGLIYIQ 246 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 AS+ L P G+H+LD+CAAPG KTTHI + + A D+ ++ + DN Sbjct: 247 TASSMIPAKVLGPDAGDHVLDMCAAPGSKTTHIAALMGNRGSIDAWDVYPHKVKLIKDNA 306 Query: 291 KRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 KRLG+ + D P + E +D++LLDAPCS GV+ +++W R++ D+ Sbjct: 307 KRLGISIIHTEVRDSVKPLPFLYE-TYDKVLLDAPCSGLGVLGHKVELRWRRKESDLSVF 365 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP----- 404 LQ ++++ + KTGG LVY+TC++ P+EN I FL ++ E P Sbjct: 366 PPLQKQLIEQAAKYTKTGGVLVYSTCTLNPDENEHIINEFLSLHSEFAPEEFNFPVLGKS 425 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIK 428 P DGFF AKL K Sbjct: 426 LNGMMTLYPDLVRSDGFFVAKLRK 449 >UniRef50_D2RNU3 Sun protein n=3 Tax=Veillonellaceae RepID=D2RNU3_ACIFE Length = 446 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 130/446 (29%), Positives = 216/446 (48%), Gaps = 18/446 (4%) Query: 1 MK-KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQ 57 MK +N R A +EQ+ +G + L + +S D+ L EL +G ++T+ Sbjct: 1 MKGTAKNPREAALLILEQIFLRGAYANLALDQGLRGATLSPLDRKLTTELVYGTVKTMGT 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKG 116 LDW +++++ RP+ V ++ +G YQLLY RIP AA E+V+ A Sbjct: 61 LDWYLSRVVNRPLRKLDPLVLVILRLGAYQLLYLDRIPASAACNESVKLAKKWVHEGAGK 120 Query: 117 LINGVLRQFQRQQEELLA------EFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANN 169 L+NG LRQ R +++ E Y HP WL++R + Y E+ + +N Sbjct: 121 LVNGALRQLARTRDQWKFPQGPDHELERIALEYYHPEWLVRRWKFRYGLEEAVKLCAFDN 180 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 RP R+N +R+ L E G++ P PD + ++ + L + Sbjct: 181 ARPAFSFRVNTLRDTREGLQEKLAEKGIRTRPSQWSPDGLLCDSLPSLDDLVEGFGPDIY 240 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYD 288 +QD S+ L PQ GE +LDLC+APGGKTTH+ + + + +++A+D+ + +L V + Sbjct: 241 IQDESSMLDAAVLDPQPGERVLDLCSAPGGKTTHLAQKMQDQGEILALDLYDHKLDLVRE 300 Query: 289 NLKRLGMKATVKQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 N +RLG+ + DG E R+L+DAPCS GV+ R + +W + +R + Sbjct: 301 NARRLGIHCIRTEKQDGTVFVPEW-ENTAHRVLVDAPCSGLGVLNRRAEARWTKEERSLS 359 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP 407 + LQ +IL ++ GG L+Y+TC++ +EN+ K FL+ + P Sbjct: 360 QFPPLQKKILANGARYVMPGGRLLYSTCTLEQDENTRVRKWFLENHPEFAPAAFPHPLTG 419 Query: 408 ----GKQNLPGAEEGDGFFYAKLIKK 429 Q LP + +GF+ K+ Sbjct: 420 EPVEELQILPQRDGINGFYLCLFEKR 445 >UniRef50_Q2LRX5 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRX5_SYNAS Length = 471 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 136/451 (30%), Positives = 215/451 (47%), Gaps = 27/451 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKV---SDKDKALLQELCFGVLRTLSQLDW 60 + + RS+A + ++++ G +L + S D+ LL L +G LR +LDW Sbjct: 21 KISPRSLAVEILDRIDTTGAFAEPLLDAFLRDHLLDSAPDRHLLTSLVYGTLRMRGRLDW 80 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I +L + Q + ++ LYQ L+ RIP A + E VE A ++ P + L+N Sbjct: 81 IIQQLYQGRFSSMQGGIRNILRTALYQFLFMERIPAFALVDEAVELAK-LRYPGREKLVN 139 Query: 120 GVLRQFQRQ--------QEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +LR R+ + + HP WL++R Y E+ +S+ ANNQ Sbjct: 140 ALLRNAVRKVSANELSYPDFQKTPVEHIAVMHSHPPWLVRRWLSVYGTERCRSLCMANNQ 199 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAP-VHALPGFEDGWVT 229 PP+ +R+N R + +L+ G + PDA+ + P + +G Sbjct: 200 VPPVAIRVNSLKADRSTLKEILEHEGFTVSESSFSPDALLITDPPRHLRLTSTSREGLFI 259 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYD 288 +QD ++Q +AP GE ILD+C G KTTH+ + + +++AVD+ +L + Sbjct: 260 LQDEASQLIGRLVAPAAGEAILDVCCGTGVKTTHLASLMSNQGRILAVDLYPAKLEALNR 319 Query: 289 NLKRLGMKAT-VKQGDG-RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 R+G+ ++Q D + FDRIL+DAPCS G +RR+P+IKW + R + Sbjct: 320 LSSRMGISNIEIRQADASTMEDETAFRNMFDRILVDAPCSGLGTLRRNPEIKWRLQPRAL 379 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC------- 399 P ++LQ +IL+ L GG LVY+TC++LPEEN L I FL R + Sbjct: 380 PSYSRLQEQILNRAAAFLHRGGCLVYSTCTILPEENELLIGKFLSRHDEFRQIRLSDASF 439 Query: 400 --ETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 T E + P DGFF A L K Sbjct: 440 AYPTLVDENGFFRTAPDTSGMDGFFAALLTK 470 >UniRef50_A8PKU4 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Rickettsiella grylli RepID=A8PKU4_9COXI Length = 442 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 182/433 (42%), Positives = 260/433 (60%), Gaps = 10/433 (2%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNIL-PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R +AA + + +++ +L+ IL + + +D+A +QELC+GV+R L L + Sbjct: 2 SNTRRIAAHIISRFLKKKIALNTILFAEVPSGIDVRDRAFIQELCYGVIRWYFPLKKLSS 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+ + + + ++ L++VGLYQL Y I PHAA+ ETV+ A +++ LINGVLR Sbjct: 62 FLLKKSLNRSDQDIYALVLVGLYQLNYLNISPHAAVYETVQAAKELRKRWAAPLINGVLR 121 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 FQRQ+ LL + + HP WL+K+LQ A+P W+SI++ANN M LR+N+ Sbjct: 122 SFQRQKTGLLKKVSQIT-HLAHPDWLIKKLQHAWPNAWRSILDANNHLASMSLRVNQLEI 180 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 +R+S+L L+ + + L+T PV LPGF G +++Q+ SAQ + L Sbjct: 181 TRESYLQKLNNNNINATLSELSQSGIILDTSFPVDKLPGFRTGEISIQNISAQLSASLLL 240 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ- 301 ++G+H+LD CAAPGGKTTHILE PE A VAVD D RL+R+ DNLKRL + Q Sbjct: 241 LEDGQHVLDACAAPGGKTTHILETQPELACCVAVDADVVRLTRLKDNLKRLKLTEKKIQL 300 Query: 302 --GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 + + + FDRILLD+PCS TGVIR+HPDIK LRR++D+ +LA Q ++L + Sbjct: 301 FPMKVQDFKIFWKGRMFDRILLDSPCSGTGVIRKHPDIKLLRREKDVIQLADQQYQLLSS 360 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----LCETGTPEQPGKQNLPGA 415 +W LK GG L+Y TCSVLPEEN+ +K FL DA G G+Q LP Sbjct: 361 LWGLLKPGGILLYVTCSVLPEENANVLKRFLTHHFDAREEVIRETWGLACPIGRQILPEI 420 Query: 416 EEGDGFFYAKLIK 428 DGF+YA+L K Sbjct: 421 HGADGFYYARLRK 433 >UniRef50_A3MAA2 16S rRNA m5C967 SAM-dependent methyltransferase n=18 Tax=Acinetobacter RepID=A3MAA2_ACIBT Length = 434 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 173/427 (40%), Positives = 251/427 (58%), Gaps = 10/427 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 NLR+ Q + +V +QGQSL++IL +V+++D+AL EL G LR L + L Sbjct: 12 NLRAQVVQTLLKV-QQGQSLASILNTQLNQVAERDRALFHELVLGTLRQWFALKSISLPL 70 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 +++P+ TV + VGLYQ+L TRI HAA++ETV+ + P L G++N +LR+ Sbjct: 71 LSKPLN--NETVETCLYVGLYQVLCTRIAAHAAISETVDATKQLGFPALSGIVNAILRRA 128 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R+ E+ + + PSWL KRL+K + EQ +++ ++ Q P+ LR+N+ H R Sbjct: 129 TRETEDFEQGLQQA---HGLPSWLFKRLKKDWGEQTEALCQSLKQVAPLTLRVNQRHIGR 185 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 D++LA L ++ + LE + LPGFE GW +VQD AQ C T L Sbjct: 186 DAYLAKLQSLDIQARACLFSEAGIVLEQSVQITQLPGFEQGWFSVQDEHAQLCATLLPDL 245 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 N + ++D CAAPGGKT H+LE AQ++A+D D RL RV +NL RL + + + Sbjct: 246 NNKTVIDACAAPGGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHTEILAA 305 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 ++W Q D I+LDAPCSATGVIRRHPDI+ LR+ DI + +LQ +IL+ +W LK Sbjct: 306 DATKWNPVQPVDCIVLDAPCSATGVIRRHPDIRLLRQSSDIAQTIELQKQILEHMWQQLK 365 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEEGDGF 421 GGTL+Y TCS+L EN Q+ F DA+ + G + G+Q LP A+ GDGF Sbjct: 366 VGGTLLYITCSILKSENEQQMINFFTEHPDAKEVKIEADWGIEQVHGRQLLPEAQSGDGF 425 Query: 422 FYAKLIK 428 +Y K+ K Sbjct: 426 YYCKIQK 432 >UniRef50_B8CWT0 Sun protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWT0_HALOH Length = 440 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 120/440 (27%), Positives = 214/440 (48%), Gaps = 30/440 (6%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLDWLINKLM 66 R +A + + ++ ++G + +L KVSD +D+A + EL +GVLR +LD++++ Sbjct: 5 RKVAIKVLIEI-DKGAYSNLVLNKELNKVSDKRDRAFITELVYGVLRQKKRLDYMLSCFS 63 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 RP+ V + V LYQ+ YT +P AA+ ETVE + NGVLR + Sbjct: 64 KRPLRKMDNEVLSALRVALYQIEYTDSVPARAAVYETVEALKSFTGHGAVKFTNGVLRSY 123 Query: 126 QRQQEELLAEFNASDA------RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRI 178 R +++++ + Y +P W++K Y + + + + N PP+ +R Sbjct: 124 LRNKDKIIFPDRNQNPVNFLANYYSYPEWIIKEWINKYGFKDTERLCQYLNDSPPVTVRY 183 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 NR + +L + + ++ PD + + LP F+DG VQ +A Sbjct: 184 NRLQVDQKRFLEVFKKYNIEVE-STTVPDCYVVNNFNTIKDLPLFKDGGFIVQGPAATLA 242 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKA 297 L P G +LD+ A PGGKTTH+ E+ +++A+DI E +L + +N RLG+ Sbjct: 243 GFVLGPDPGNRVLDMSAGPGGKTTHLAELMNNRGEIIALDIYEHKLKLIEENCNRLGVNI 302 Query: 298 T-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 + DGR + +++FD +L+DAPC+ G++ P+IKW R + D+ +L ++Q + Sbjct: 303 VKTIKVDGR---DYTSQEKFDMVLVDAPCTGLGLVAHKPEIKWNRTENDVKKLQEIQKSL 359 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR--------TADAELCETGTPE--- 405 L ++ GG ++Y+TC++ EN + LQ+ + L E G Sbjct: 360 LHNALSLVRDGGFVLYSTCTLTRAENEEVVNQVLQQTDFVVSPVNMEKRLSEIGFSGKFK 419 Query: 406 ---QPGKQNLPGAEEGDGFF 422 + + P + +GF+ Sbjct: 420 ITPEGYLEFFPPESKTEGFY 439 >UniRef50_A8ZUK3 Sun protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUK3_DESOH Length = 468 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 136/451 (30%), Positives = 215/451 (47%), Gaps = 24/451 (5%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVS---DKDKALLQELCFGVLRTLSQLD 59 ++ + R++A + + + + ++L + +VS +D+AL+ L +GVLR + LD Sbjct: 17 RKSDPRAVALRILTALEKGHRTLDQVADEALARVSFPEKRDRALVTTLVYGVLRWRNTLD 76 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 + I P+ V ++ +GL+QL + RIP AA+ +V+ + +L G + Sbjct: 77 YTIVHFSRTPLQRMDPAVLNILRLGLFQLRFLDRIPDFAAINSSVDLSKQAGLGRLSGFV 136 Query: 119 NGVLRQFQRQQEELLAE------FNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 NG+LR R E A P W+++R + E+ + + N Sbjct: 137 NGLLRSSTRHPGEPDPPDMDKDPVQALCVTKSFPEWMIRRWIARFGIEETVQLCDFLNTV 196 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPA-PVHALPGFEDGWVTV 230 PP+ +R+N + + A L + P P+AV +P PVH + F GW V Sbjct: 197 PPITVRVNGLRAAPEQVAASLAQEAAGVTPGRHAPEAVSFSSPKVPVHEMTAFGAGWFQV 256 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 QD +AQ P+ G+ +LD CA GGKT H+ + + ++VA D D +L R+ Sbjct: 257 QDEAAQLIGLLTDPRPGQRVLDACAGLGGKTGHLARLMENQGRIVAADRDTAKLERLAGE 316 Query: 290 LKRLGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 + RLG+ D P Q FDR+L D PCS TGVIRR+PD KW ++D+ Sbjct: 317 MTRLGITNVRPMTLDMLVPEQLKDAGGFDRVLADCPCSGTGVIRRNPDTKWRLSEQDLAR 376 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL---------C 399 L Q +L + H++ GG LVYA CS+ PEEN +++FL+R D + Sbjct: 377 LQNDQIAMLTNLADHVRDGGLLVYAVCSMEPEENDAVVQSFLKRRPDFAIDTGVAADVPA 436 Query: 400 ETGTPEQPG-KQNLPGAEEGDGFFYAKLIKK 429 G + PG + P DGFF +L K Sbjct: 437 VAGFTDDPGFFRTFPWRHGMDGFFGVRLKKN 467 >UniRef50_A7VUU4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUU4_9CLOT Length = 446 Score = 432 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 125/447 (27%), Positives = 211/447 (47%), Gaps = 22/447 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQL 58 M +N R A +A+ +V E + +L + +D A L +GVL L Sbjct: 1 MSAGKNARLTALKALLRVEEGKGYSNLVLDHGLAASGLDGRDAAFASALFYGVLERRITL 60 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 D+ I++ P++ V ++ +G YQLLY ++P AA+ E+V+ A+K+ + G Sbjct: 61 DYQISRYSKMPLSQMAAPVREILRLGFYQLLYMDKVPQSAAVNESVKLTRAVKKDKASGF 120 Query: 118 INGVLRQFQRQQEELLAEFNASD----ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 +NG+LR F R +D +Y P W++ +Y E+ +VE RP Sbjct: 121 VNGILRSFIRDGCPCRLPAETADDYLMVKYACPQWIIDLWITSYGRERALELVENLTGRP 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P+ +R+N +R++ L E G++ A+ LE + +L F+DG+ VQD Sbjct: 181 PLAVRVNSCKTTREALTERLKEEGVETKEVPGVEQALTLERSGSIESLSSFQDGFFHVQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLK 291 ++Q C L+P+ GE + D+CAAPGGKT + E+ + ++ + D+ ++ + K Sbjct: 241 LASQLCCQALSPKPGERVYDVCAAPGGKTFTMAELMENQGELSSFDLYPAKVKLIQQGAK 300 Query: 292 RLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ + D +P + D++L D PCS G+IRR P+I++ + + L Sbjct: 301 RLGLSVVNARIRDAAHPEEMLPPG--DKVLCDVPCSGLGIIRRKPEIRY-KNKNMLDSLP 357 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQ 410 LQ IL K G L+Y+TC++ P EN+ + FL D E PE + Sbjct: 358 DLQYLILCISANLTKKHGVLLYSTCTLNPGENNQVARRFLLEHPDFEPYPVSLPEGYERN 417 Query: 411 NLP---------GAEEGDGFFYAKLIK 428 + DGFF++ + Sbjct: 418 SFDRENEATLFVKKNGTDGFFFSGFRR 444 >UniRef50_A4BP82 Fmu, rRNA SAM-dependent methyltransferase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BP82_9GAMM Length = 423 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 197/422 (46%), Positives = 266/422 (63%), Gaps = 7/422 (1%) Query: 13 QAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 Q ++ V+ G++L N L + +D+AL QELC+GVLR S+L+ L+ L+ + Sbjct: 2 QTLQDVLAHGRTLPNALADSVAALQDSRDRALCQELCYGVLRWHSRLEALVLNLLEQRPR 61 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEE 131 + R + L+ +GLYQL+YT+IPPHAA++ TV+ A A+ + G +N VLR+FQR++ Sbjct: 62 NRDRDLTLLLELGLYQLMYTQIPPHAAVSATVDTARALGKSWAAGWVNAVLRRFQRERAN 121 Query: 132 LLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 L + A R+ P WLL+ L+ +P WQS+V+A+N R P+ +RINR RD+WLA Sbjct: 122 RLQAVDLDCATRHAMPPWLLQWLRADWPSDWQSLVQASNARAPLTVRINRRRRDRDAWLA 181 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 L + G + P A+ L PV LPGF DG V+VQDA+AQ LA + + + Sbjct: 182 QLSAVSLTGAHLTELPQAIMLSRALPVTELPGFADGEVSVQDAAAQFAAMLLALRPKQRV 241 Query: 251 LDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 LD CAAPGGKTTHILE A E + A+DID QRL+RV +NL RLG++A + GD P+ W Sbjct: 242 LDACAAPGGKTTHILEQA-EVTLTALDIDAQRLTRVAENLARLGLQANLLVGDATDPASW 300 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 FDRIL+DAPCS TGVIRRHPDIKWLRR D+P LA Q +L+ +WP L +GG L Sbjct: 301 WDGLTFDRILVDAPCSGTGVIRRHPDIKWLRRPSDLPALAATQQRLLNRLWPLLSSGGRL 360 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDGFFYAKL 426 +YATCSVL EN I++FL+ DA + G Q G Q LPG + DGF+YA L Sbjct: 361 IYATCSVLRAENDAVIESFLRGHGDALVRAPDIPLGRALQFGHQILPGERDMDGFYYACL 420 Query: 427 IK 428 K Sbjct: 421 EK 422 >UniRef50_Q87AR1 Ribosomal RNA small subunit methyltransferase B n=20 Tax=Gammaproteobacteria RepID=RSMB_XYLFT Length = 431 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 175/433 (40%), Positives = 252/433 (58%), Gaps = 11/433 (2%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLD 59 M R +AA+ + VV+QG+SL L + D +D+AL++ +CF VLR + Sbjct: 1 MSDGIAPRVVAARVLALVVDQGRSLKTELAAALPTLEDVRDRALVEAICFAVLRRRPVYE 60 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 + + +ARP+ + L+MVG QL ++PP+AAL+ TV+ + P +N Sbjct: 61 AALTRWLARPLGRGDAQLRGLLMVGFAQLDVLKVPPYAALSATVDACRVLGWPHRVSFVN 120 Query: 120 GVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRIN 179 VLR+ QR++ +++ A P WL +R++ + EQ ++I +A+ + PMWLR+N Sbjct: 121 AVLRRAQRERLPVVSSDAA------WPRWLAERIRADWGEQAEAIFDASLKPAPMWLRVN 174 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 + R +++ L AG++ P P+A+ L+ PV LPGF+ G V+VQD SAQ Sbjct: 175 LRYGDRHTYVQRLQAAGLEAVPSGLVPEALALDCSVPVVQLPGFQGGEVSVQDLSAQQVA 234 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L+P +LD CAAPGGK H+LE AP + A+D+D QRL RV + R+ +KA + Sbjct: 235 ALLSPAPHARLLDACAAPGGKAAHLLERAPTLCLTALDVDMQRLRRVAETCDRIHVKARL 294 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 D + W + FD +LLDAPCSATGV+RR PD+ RR D+ L +QS +LDA Sbjct: 295 CVADATDLAAWWDGEPFDAVLLDAPCSATGVVRRQPDVLLHRRAEDLLPLLNIQSRLLDA 354 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT----PEQPGKQNLPGA 415 W L+ GG LVY TCSVL EN Q++AFL RTADA + G P G+Q LPG Sbjct: 355 CWRTLRPGGVLVYVTCSVLRAENQTQLEAFLARTADACAEDPGDAYGQPAGLGRQRLPGE 414 Query: 416 EEGDGFFYAKLIK 428 + GDGFFYA+LIK Sbjct: 415 QGGDGFFYARLIK 427 >UniRef50_B3WEW8 RRNA methylase (Putative) n=77 Tax=Bacilli RepID=B3WEW8_LACCB Length = 446 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 127/449 (28%), Positives = 200/449 (44%), Gaps = 24/449 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQL 58 M N R +A + + +V QG + L + K++ +D LL + +GV++ L Sbjct: 1 MTP-NNPRLLAVETLSRVTGQGGYSNLTLDHVINSHKLTPRDAGLLTNIVYGVIQHQLTL 59 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 D+ + + + L+ + +YQL Y ++P A ++ E A + + Sbjct: 60 DFYLAPFIKG--RKLDNWIRCLLDIAVYQLQYLDKVPARAVFFDSTEIAKKLGHQGIAKF 117 Query: 118 INGVLRQFQR----QQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRP 172 + GVLR QR + P WL+++L E + ++I+ N Sbjct: 118 VTGVLRNAQRTGFPDPAAIADPVKRLSIESSTPVWLVEKLTAQLGEPKTRAILNVINVPA 177 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 LR+N T + + LA L P + + + F G T+QD Sbjct: 178 HASLRVNTTKITPAALLASLKPEFPDLKESPLTPIGLIAPSGH-LAGTSAFVKGEYTMQD 236 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP---EAQVVAVDIDEQRLSRVYDN 289 S+ L Q G+ +LD CAAPGGKTTHI + QV A+D+ ++ + N Sbjct: 237 ESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHANKVRLINKN 296 Query: 290 LKRLGMKATVK--QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 KRLG+ + D R + FD+IL+DAPCS G+IRR P+IK+ + D Sbjct: 297 AKRLGLTDRIHAQVLDARKVATTFPANSFDKILVDAPCSGLGLIRRKPEIKYTKTPEDPA 356 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT---- 403 L Q+Q IL+++ P LK GG L Y+TC+++ EEN + FL + E T Sbjct: 357 HLQQIQLAILNSVAPTLKIGGRLTYSTCTMVKEENQDVVAQFLAAHPEFEQVSVPTLKPL 416 Query: 404 ---PEQPGKQNLPGAEEGDGFFYAKLIKK 429 P Q P + DGFF A LI++ Sbjct: 417 HKAHNAPALQLFPDDYDTDGFFIASLIRR 445 >UniRef50_D0BMY2 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Granulicatella RepID=D0BMY2_9LACT Length = 441 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 129/439 (29%), Positives = 213/439 (48%), Gaps = 18/439 (4%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +R+ + QV + + L + QQK + KDK LL EL +G ++ +D+ + Sbjct: 4 VRNAVVDLLVQVEQDQSYSTISLKKVIEQQKWTAKDKGLLTELFYGTIQRKMTIDFYLAP 63 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + Q V L+ + +YQ+++ +IP HAA+ E V+ A + +NGVLR Sbjct: 64 YIQK-AKKIQPWVKQLLRISIYQMVFLDKIPDHAAIFEAVQIAKKRGHQGIAKFVNGVLR 122 Query: 124 QFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRI 178 FQR EE+ +Y P W+ + ++ Y EQ Q I E+ P + +RI Sbjct: 123 NFQRNDLRSFEEIKDTDERMSVQYSIPKWMYQLFKQQYGVEQAQQISESILTAPSVSVRI 182 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 H +++ LL E G++ + +E V FE G +T+QD ++ Sbjct: 183 QPNHLNQEQVKQLLLEEGVQTRESTLSNRCLIVEEG-NVFLSKTFEKGIITIQDEASSLV 241 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVA---PEAQVVAVDIDEQRLSRVYDNLKRLGM 295 + +LD CAAPGGKTTHI +V A+D+ E +L ++ +N KRL + Sbjct: 242 AQVANLKPTNKVLDTCAAPGGKTTHIASYLDPSKGGRVDALDLYEHKLKKIQENAKRLQV 301 Query: 296 KATV--KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + + D R + + FD + +DAPCS G++RR PDIK+ + +D+ L ++Q Sbjct: 302 DDCISMRILDARNAQEAYPTESFDAVFVDAPCSGLGLVRRKPDIKYTKSLKDLKSLEKIQ 361 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG---TPEQPGKQ 410 +IL + +K+ G+LVY+TC++ EN + FL+ E+ G + Sbjct: 362 LDILLSASKMVKSKGSLVYSTCTINKAENRELVNQFLEENPAFEIEPIGKWIHKDTEDIT 421 Query: 411 NLPGAEEGDGFFYAKLIKK 429 LP DGF+ KL+KK Sbjct: 422 ILPNDFNSDGFYICKLVKK 440 >UniRef50_Q0AXL7 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXL7_SYNWW Length = 456 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 127/451 (28%), Positives = 213/451 (47%), Gaps = 24/451 (5%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLD 59 K R MAA+ V +V+E+G + L + +S D+ LL E+ G +R + LD Sbjct: 7 KAVNKARIMAAEIVYEVMERGAFANLALAKALRNSDLSAADRHLLTEIVNGTVRMIKHLD 66 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLI 118 W++ + P+ + + ++ LYQL++ ++P +A + + VE + ++ G+ Sbjct: 67 WVLELFLHSPIKKQNPYLLSILRTALYQLMFLAKVPDYALVNDAVEISRQKMGAKMAGVS 126 Query: 119 NGVLRQFQRQQEELLAEFNASD---ARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPM 174 N VLR R+ +++ + Y HP WL+K Q ++++ NN R + Sbjct: 127 NAVLRNIIRKLDKIKYPDDPVSFYSIYYSHPDWLVKLWLDTLGTQACETLLAYNNSRSRV 186 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE-TPAPVHALPGFEDGWVTVQDA 233 LR N SR+ + L+E G+K P + +E P P+ F+ G+ +Q+ Sbjct: 187 VLRCNPLKCSREELIDKLEEEGVKAQLSPLTPWGIVVEDNPQPIAETASFKKGYFYIQNE 246 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKR 292 ++ L P GE +LDLC GGKTTH+ E +V+AV+ Q+L + N +R Sbjct: 247 ASMLAAAILNPPAGERVLDLCCGVGGKTTHLAEYMNNQGEVLAVEFYAQKLELLRQNCQR 306 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 LG+ VK + + E + +LLDAPCS GV+ R D +W + +I EL QL Sbjct: 307 LGL-GIVKDLEKDIRTLNSKEVKARYLLLDAPCSGWGVLNRRADARWRKNQEEINELTQL 365 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC------------- 399 Q++ + ++ G L+YATC++ EN I+ FL+ L Sbjct: 366 QAQFISHAATMVEKQGYLLYATCTINQAENEEIIEGFLEENQHFVLEGFLSKLSFFPLDK 425 Query: 400 -ETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + + + +PG DG FYA L +K Sbjct: 426 PDKASANRGMLTLMPGKYGTDGMFYALLRRK 456 >UniRef50_A8RWU3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8RWU3_9CLOT Length = 455 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 124/436 (28%), Positives = 200/436 (45%), Gaps = 17/436 (3%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R + + +V+EQG + +L QK + D++ + G L L Q+D +IN+ Sbjct: 12 REIVLDILTEVLEQGAFVHLVLNQALQKYQYLGKADRSFITRAVEGTLEYLIQIDEVINR 71 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + + L+ + +YQ+LY R+P A E V+ A+ LKG +NGVLR Sbjct: 72 YSKTKINKMKPFIRSLLRMSVYQILYMDRVPDSAVCNEAVKMAVKRHFSGLKGFVNGVLR 131 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH 182 R++E L F+ RY P W+ +K + E+ + I + + P W+R N Sbjct: 132 TISREKENLT--FDTPSLRYSIPEWMYAMWEKEFGKEKAEKIAASFLEDKPTWVRCNLHR 189 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R+S LA L G + ++ + L F GW+ VQD ++ Sbjct: 190 ADRESILASLKAQGTSVRELPFMESMIAIDGYDYLEGLDAFRKGWIQVQDVTSAFVGEIA 249 Query: 243 APQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 +P+ +I+D+CAAPGGK+ H+ + + V A D+ Q+ + + +N+ R G+ Sbjct: 250 SPEKDSYIIDVCAAPGGKSLHLADKLEGTGMVEARDLTYQKTALIEENMARCGVTNMKTL 309 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 + + D ++ D PCS G+I R PDIK+ + ELA LQ EIL +W Sbjct: 310 VWDALETDLSAMAKADIVIADLPCSGLGIIGRKPDIKYNMTPEKLEELAGLQREILSVVW 369 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA----DAELCETGTPEQPGK-----QNL 412 ++K GG L Y+TC++ EN R D G P++P Q L Sbjct: 370 QYVKPGGLLCYSTCTIDRLENQDNAAWLRDRFPLVPVDLTDRFGGLPQEPSLKDGWIQFL 429 Query: 413 PGAEEGDGFFYAKLIK 428 PG DGFF + + Sbjct: 430 PGVHPYDGFFISVFRR 445 >UniRef50_C0QI57 RsmB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI57_DESAH Length = 455 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 136/445 (30%), Positives = 204/445 (45%), Gaps = 17/445 (3%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQL 58 + ++ R +A + + +L IL ++ +D+AL + +G LR L Sbjct: 11 EPIKDPRFLALTILIENESSKFTLDKILERYSAQLESLAHRDRALANAIIYGTLRWKEHL 70 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 DWLI RP+ + + Y + LYQ ++ +IP AA+ V A + G Sbjct: 71 DWLITPFSKRPLDQIEPAICYTLRTALYQTVFMDKIPVSAAVNTAVNAAKKLSNTGAAGF 130 Query: 118 INGVLRQFQ-RQQEELLAEFNASDARY-----LHPSWLLKRLQKAYPEQW-QSIVEANNQ 170 +N VLR+ R + + + A + P WL +R + + ++++A N Sbjct: 131 VNAVLRKATTRYMDVAMPDSKKDPALFISKSQSIPLWLSRRWIRRFGLDASIALLDAINT 190 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPA-PVHALPGFEDGWVT 229 PP+ LR N R S L+ P PD + + P P+H F++G Sbjct: 191 IPPITLRANTLRTDRASLATALEPHVETIVPTFHTPDGLSVTRPRTPLHLTTAFKEGLFQ 250 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYD 288 VQD + Q T LAPQ GE ILD CA GGKT H+ ++ ++ A D+D ++L+ + + Sbjct: 251 VQDEATQIVTTLLAPQPGERILDACAGLGGKTGHMGQIMNNQGKIEAWDLDARKLAVLGN 310 Query: 289 NLKRLGMKATVK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 +KRLG+ Q D FDR+L+DAPC+ GV+RR+PD +W R DI Sbjct: 311 EMKRLGITNVTTKQMDALDIDPAECNTPFDRVLVDAPCTGLGVLRRNPDARWRRTLGDIK 370 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP--- 404 LA LQ IL+ + +K GG LVYA CS PEEN I FL L Sbjct: 371 RLADLQKRILNNLADLVKPGGILVYAVCSCEPEENEGVIDWFLNNQKSFALVPQSHDLAS 430 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIKK 429 + + P DGFF A + K Sbjct: 431 QDGIFKTYPHPLGMDGFFAATMKKN 455 >UniRef50_C0EFK3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFK3_9CLOT Length = 441 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 126/440 (28%), Positives = 200/440 (45%), Gaps = 18/440 (4%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWL 61 R R +A A+ ++ +QG + + +S +D+ +L +GVL T LD++ Sbjct: 3 NRTARDLALSALLKMDKQGAYSNLAFDGMLSSSSLSPRDRDFAAKLFYGVLETKITLDYI 62 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 I V ++ +GLYQ+ Y + AA+ E+V + G +N + Sbjct: 63 IASYATMKPEKISSDVRNILRLGLYQIKYLDLEDFAAVNESVNLVKLRGKKSASGFVNAI 122 Query: 122 LRQFQRQQEELLAEFNASD---ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 LR F R + + + + R+ P WL++ Y E + I+E+ RPP+ LR Sbjct: 123 LRAFLRDGKNIPLPEDPDERLSVRFSCPVWLVRSFVGEYGRETAERILESQLGRPPLTLR 182 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 +N S ++ ALL + G++ PH V + + F +G VQD S+Q Sbjct: 183 VNTLKTSAETLCALLQQEGIEAVPHPQEQTCVEVLGGGALTGTKAFAEGLFHVQDISSQL 242 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGM- 295 C +A +LD+CAAPGGKT I E+ A++ A D+ ++R+ + RLG+ Sbjct: 243 CARTVASYAPRTLLDVCAAPGGKTFTIAEELGDAAEITACDLHKKRVGLIKQGAARLGLC 302 Query: 296 KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 + D + G QFD +L D PCS GVIRR P+IK+ + + L +Q Sbjct: 303 SVDAVESDASKANDRFG--QFDAVLCDVPCSGFGVIRRKPEIKY-KPQESLQGLPAIQGN 359 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE-------LCETGTPEQPG 408 IL ++K GG L+Y+TC++ EN + FL+R L + Sbjct: 360 ILQTSASYVKEGGMLIYSTCTIAKRENEQVVDEFLRRNPAFVPAKLPGFLHQWVPDAVNR 419 Query: 409 KQNLPGAEEGDGFFYAKLIK 428 LPG DGFF A K Sbjct: 420 VTFLPGVHNSDGFFLAVFQK 439 >UniRef50_A5GRG8 Ribosomal RNA small subunit methyltransferase B n=19 Tax=cellular organisms RepID=A5GRG8_SYNR3 Length = 454 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 147/432 (34%), Positives = 219/432 (50%), Gaps = 24/432 (5%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A + +E V + G L + K+S +D+ L EL +G +R +LD ++ Sbjct: 31 PRLVAWRVLEAVGD-GAYADLALERELKRSKLSPRDRGLATELAYGAIRQRRRLDGWLDL 89 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L P + + +L+ VGL Q+L R+P AA++ VE A + +L ++NGVLR Sbjct: 90 LGKVPAAKQPPRLRWLLHVGLQQILLMDRVPASAAVSTAVELAKRERLQRLAPVVNGVLR 149 Query: 124 QFQRQQEE------LLAEFNASDARYLHPSWLL-KRLQKAYPEQWQSIVEANNQRPPMWL 176 R E + P WL+ + + PE+ +++ A+N+ PP+ L Sbjct: 150 AAVRAVEAGESLPVPSDPQKRLALEHSLPDWLVAELWGQIGPERTEALAAASNRIPPLDL 209 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASA 235 R NR SR++ L L A+ PD + L + P P+ L GF +G VQD +A Sbjct: 210 RCNRLRSSREALLENL-----PAVALAELPDGLTLTSRPGPLPQLAGFSEGQWCVQDRAA 264 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLG 294 Q L P+ G+ +LD CAAPGGKTTHI E+ + +VVAVD+ +RL +V N +RLG Sbjct: 265 QRIAPLLDPKPGQRVLDACAAPGGKTTHIAELMGDQGEVVAVDVAPRRLQQVSANAERLG 324 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + + + FDR+LLD PCS G + RH D +W + I EL LQ Sbjct: 325 LSCIRTEAADATDLTDWEAESFDRVLLDVPCSGLGTLARHADARWNLKPDGIEELVGLQH 384 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPG 414 ++L+ LK G LVYATC+V P EN+ ++AF++ D + E P Q P Sbjct: 385 QLLEQGARLLKPDGRLVYATCTVHPAENTGVVEAFVEENPDWQFSE------PPMQLWPD 438 Query: 415 AEEGDGFFYAKL 426 + GDGFF A L Sbjct: 439 PQGGDGFFAAVL 450 >UniRef50_Q7A601 SA1060 protein n=63 Tax=Staphylococcaceae RepID=Q7A601_STAAN Length = 461 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 121/438 (27%), Positives = 208/438 (47%), Gaps = 22/438 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+RS+A ++ ++ +G + + + +++ DKAL E+ +G ++ LD+ + Sbjct: 30 NVRSLAFDTIQDILNEGAYSNLRINEVLSENELNAMDKALFTEIVYGTVKRKYTLDFYLK 89 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + V L+ + +YQ +Y ++P HA + E VE A ++NG+L Sbjct: 90 PFVKTKIKA---WVRQLLWMSIYQYVYLDKVPNHAIINEAVEIAKERGGYHNGNVVNGIL 146 Query: 123 RQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 R R E+ Y P W++ Y E+ ++I+++ + +R Sbjct: 147 RTMMRSDLPDFNEIADPKKRMAIEYSMPKWIIDHWATHYGLEETETILQSFLETTSTTVR 206 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 N T S D + L + G D P + + P+ F+DG+V++QD S+ Sbjct: 207 ANLTRASLDDIIEKLQDEGYDVEKDHDLPYCLHI-GGQPIIHSRSFKDGFVSIQDKSSMF 265 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 + +H+LD C+APGGK HI E + PE QV A DI + ++ + N+K+L + Sbjct: 266 VAHIMNVDRHDHVLDACSAPGGKACHIAEVLMPEGQVDASDIHDHKIDLINFNIKKLRLT 325 Query: 297 ATVK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 Q D P +D+IL+DAPCS GV+R P+IK+ + + I L +LQ E Sbjct: 326 NIKAFQHDATKPYDKT----YDKILVDAPCSGLGVMRHKPEIKYTQSKQHIESLVELQLE 381 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG----KQN 411 IL+ + ++K GG ++Y+TC++ EN I FL+ + E P Q Sbjct: 382 ILENVKNNVKIGGEIIYSTCTIEQLENENVIYTFLKNNKNFEFEPFQHPITGELVKTLQI 441 Query: 412 LPGAEEGDGFFYAKLIKK 429 +P DGFF K+ +K Sbjct: 442 MPQDFNSDGFFITKIKRK 459 >UniRef50_C9L6W4 Ribosomal RNA small subunit methyltransferase B n=12 Tax=Clostridiales RepID=C9L6W4_RUMHA Length = 454 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 123/450 (27%), Positives = 211/450 (46%), Gaps = 22/450 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M + NLR + + ++ ++GQ ++ +K + +++A L +C G L + Sbjct: 1 MVNKVNLRELVLGILLEINKEGQHSHLVIRSTLEKYQYLEKQERAFLTRVCEGTLEYKLR 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKG 116 LD+++++ + P+ + + ++ +YQLLY +P A E V+ A L G Sbjct: 61 LDYILDQYSSVPVEKMKPVIREILRSSVYQLLYMDNVPDSAVCDEAVKLARKKGFYNLTG 120 Query: 117 LINGVLRQFQRQQ-----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +NGVLR+ R+ E Y P WL+++ Y E+ + ++EA Sbjct: 121 FVNGVLRKVAREYGSIHFPEKDQPVEYLSVLYSMPKWLVEKFLGEYGFEKTEKMLEAFLT 180 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P +RI + + + L L + P +A ++ + AL F G + V Sbjct: 181 EKPTTIRIRQHLVDKGAVLDSLKRQKVTVEPAPYVENAYYIKDYDYLPALEAFRMGNIQV 240 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDN 289 QD S+ P+ G++++DLCAAPGGKT I + + ++ A DI + + +N Sbjct: 241 QDVSSMLVGEVADPKEGDYVIDLCAAPGGKTLCIADKLKGTGRIDARDISRTKTDLIREN 300 Query: 290 LKRLG-MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 R + V + D E+ D ++ D PCS GVI + DIK+ I E Sbjct: 301 AIRQNFLNVVVTEKDATQLDSESFEK-ADILIADVPCSGLGVIGKKTDIKYNITQNGIAE 359 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA------DAELCE-- 400 L LQ +IL+ ++K GGTL+Y+TC++ EEN ++ F++ D LCE Sbjct: 360 LVNLQRKILEQASTYVKPGGTLIYSTCTINKEENIENVRWFVENYPYELESIDDYLCEEL 419 Query: 401 -TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + T ++ Q L G + DGFF A+L +K Sbjct: 420 RSDTTKEGYLQLLSGVHDCDGFFIARLKRK 449 >UniRef50_A0Z2Z6 Sun protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z2Z6_9GAMM Length = 438 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 169/415 (40%), Positives = 238/415 (57%), Gaps = 6/415 (1%) Query: 19 VEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVH 78 V G+SL LP + +S +++ L+QEL +G LR +L+ + +L+ +P K V Sbjct: 18 VYNGESLVRALPKGLEPLSLENRPLVQELVYGTLREWPRLEGIALQLLRKPPRAKDADVL 77 Query: 79 YLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNA 138 LI+ G++QL +P HAA+ ETVE A ++ + GLING LR +QRQ+ L + Sbjct: 78 CLILTGIHQLSGLNVPSHAAVGETVEAAKSLGKSWAAGLINGCLRNYQRQKGALEDQLTE 137 Query: 139 SDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMK 198 S + L P WL + + K +P+Q I A+ + PPM LR+N SR +++ L A + Sbjct: 138 SQSNAL-PDWLWQAICKQWPDQASEIAGASREHPPMTLRVNLQRGSRADYVSTLQNADIP 196 Query: 199 GFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPG 258 + A+ L+TP PV ++PGF +GW +VQDASAQ +L P N E I D CAAPG Sbjct: 197 VAINPHIATAITLQTPRPVSSIPGFLEGWSSVQDASAQLAAQFLQPNNDESIFDACAAPG 256 Query: 259 GKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDR 318 GKT H+LE AP+A+V+A DI +QRL + +N RL + VK D S G +QFD Sbjct: 257 GKTCHVLECAPKAKVLAADISDQRLESLQENSTRLNLPLDVKVVDATQASVTLGPRQFDA 316 Query: 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 IL D PCSATGVIRR+PDIK R+ DI Q Q +IL+ +WP +K GG L+Y TCS+L Sbjct: 317 ILADVPCSATGVIRRNPDIKITRKAADIATFHQQQRDILEGLWPLVKPGGRLLYVTCSLL 376 Query: 379 PEENSLQIKAFLQRTADAELCETG-----TPEQPGKQNLPGAEEGDGFFYAKLIK 428 EN I+A + E+ + G Q LP GDG +++ L K Sbjct: 377 EAENDNVIEAAQSQLPQCEVMPLAGGTLRFNTRFGLQTLPTLNNGDGLYFSLLKK 431 >UniRef50_C5EIZ3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EIZ3_9FIRM Length = 447 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 121/439 (27%), Positives = 207/439 (47%), Gaps = 23/439 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R + + +V+++G + +L QK + D+A + + G L L Q+D +INK Sbjct: 13 RGIVLDILSEVLDKGSFVHLVLNQALQKYQYLDKSDRAFITRVTEGTLEYLLQIDHIINK 72 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + L+ + +YQ+LY R+P A E V+ A+ + LKG +NGVLR Sbjct: 73 YSRTKTDKMKPLIRNLLRMSVYQILYMDRVPDSAVCNEAVKLAVKRRFTGLKGFVNGVLR 132 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINRTH 182 R++ L+ F++ Y P W+ +K Y + + I + + P W+R N + Sbjct: 133 TISREKASLV--FDSPSLAYSIPQWMYDMWEKEYGSAKAEMIAASFLEDRPTWVRCNLSR 190 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R++ L LD G+ P + + + L F++GW+ VQDA++ Sbjct: 191 ALREAILKSLDSQGVMVKELDCLPSVLAISGYDYMEGLECFQNGWIQVQDATSAFVGELA 250 Query: 243 APQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 P+ G++I+D+CAAPGGK+ H+ + + V A D+ Q+ + + +N+ R G Sbjct: 251 DPKEGDYIIDVCAAPGGKSLHLADKMKGTGMVEARDLSYQKTALIEENVARSGAANIKAV 310 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 ++ D ++ D PCS G+I + PDIK+ + EL++LQ +IL +W Sbjct: 311 VWDALVPDEDAREKADIVIADLPCSGLGIIGKKPDIKYNMTMDKMRELSRLQRDILSVVW 370 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK------------ 409 ++K GGTLVY+TC++ P EN + L + G+ Sbjct: 371 QYVKPGGTLVYSTCTIDPMENEGNAMWLSENFP---LEPVDLSGRLGEDFDEPSLKDGRI 427 Query: 410 QNLPGAEEGDGFFYAKLIK 428 Q LPG DGFF + + Sbjct: 428 QFLPGIHPFDGFFISVFRR 446 >UniRef50_B3E3P1 Sun protein n=4 Tax=Desulfuromonadales RepID=B3E3P1_GEOLS Length = 464 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 152/444 (34%), Positives = 225/444 (50%), Gaps = 23/444 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 + R A ++++ +++ + ++ D+ L EL FGVLR LD + Sbjct: 17 SPRQAAYTTLQRLSGSDLHADDLIDQELSRNQLQGPDRGLFAELVFGVLRRQGTLDHYLK 76 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 +L+ +P+ + V L+ +GLYQL Y R+P HAA+ TVE I P+ KGLINGVL Sbjct: 77 QLVQQPLERLELPVLLLLRLGLYQLRYLDRVPSHAAVHATVELTNEI-LPRAKGLINGVL 135 Query: 123 RQFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMW 175 R + R+QE L A A Y P WL ++ + + + + + A+ + PP+ Sbjct: 136 RSYLRRQESLTLPDPARQPAAWLAAAYSLPGWLAEQWLQQFSQNEAAGLAAASTEIPPLT 195 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 LR+N SR + L A + P P+ ++L + LPGF++G VQD ++ Sbjct: 196 LRVNTLRISRSALLERFHAAELAAEPCRFAPEGIQLLQRCQITGLPGFDEGLFMVQDEAS 255 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLG 294 Q LAPQ GE ILD+CAAPGGK TH+ ++ + A D++ +R+ R+ ++ +RLG Sbjct: 256 QLVAHLLAPQTGEQILDMCAAPGGKATHLAQLMNDRGCITATDLNARRIRRICESAQRLG 315 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + + S + QFDRILLDAPCS GVIRR+P+ KW +I A Q Sbjct: 316 LTSIQAVAADALTSDYLEGLQFDRILLDAPCSGLGVIRRNPEAKWRLTPAEISRCAARQH 375 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK----- 409 ++DA LK G LVYATCS EE+ IK FL R + + E G P Sbjct: 376 LLIDAAAARLKPAGVLVYATCSTAMEEDETVIKDFLSRHPEF-VVENGAQFFPAWTDLFD 434 Query: 410 -----QNLPGAEEGDGFFYAKLIK 428 + P DGFF A+L + Sbjct: 435 CSGYLRAWPHRHGTDGFFAARLRR 458 >UniRef50_A5VKQ4 Sun protein n=14 Tax=Lactobacillus RepID=A5VKQ4_LACRD Length = 449 Score = 422 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 135/450 (30%), Positives = 225/450 (50%), Gaps = 25/450 (5%) Query: 1 MKKQ---RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTL 55 MK + +N R +A A+E VVE G + + L +K ++DKD+ L + +GVL+ Sbjct: 1 MKTKFQPQNARELALVALEGVVENGAYSNLQVDQLLKKYPLADKDRRLATNIIYGVLQHK 60 Query: 56 SQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQL 114 L++ +N + V L++ LYQ Y R+P A E++E A P + Sbjct: 61 LTLEYWLNGFIQG--KRLDPWVKTLLLSALYQYHYLERVPDWAVTDESIEIAKRRGNPGI 118 Query: 115 KGLINGVLRQFQRQQEELLAEFNASDARYLH----PSWLLKRLQKAYPEQ-WQSIVEANN 169 + + GVL R+ L + N D R P WL+ L Y E+ + I+++ N Sbjct: 119 RKFVTGVLHAILRKGLPDLRQINERDLRLSIENSVPRWLVNELTGEYGEEDTEKILQSIN 178 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 + +R+N + LD AG++ +A+ + + + F++G +T Sbjct: 179 EPAHQVIRVNTAKTDLPTVKQTLDAAGIEYQEGQVAQNALVITKGE-IISSDLFKNGEIT 237 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA--PEAQVVAVDIDEQRLSRVY 287 +QD SA + + + G+ +LD CAAPGGKT I E + V A+DI + ++ + Sbjct: 238 IQDESAMLAVESMHIEPGDKVLDACAAPGGKTVQIAETLADEDGHVDALDIHQHKVRLIE 297 Query: 288 DNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 N +RLG+ + T D R Q ++ FD+IL+DAPCS G++RR P+I++ + D Sbjct: 298 KNARRLGVEKRVTAHALDAREVDQLFDDESFDKILVDAPCSGIGLLRRKPEIRYTKTLND 357 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE 405 +L ++Q IL+A+ +K GG + Y+TC++L +EN ++AFL + EL +T T Sbjct: 358 SKQLHKIQLAILNAVAAKVKKGGIITYSTCTILRQENDDTVQAFLAEHPEFELVKTTTAR 417 Query: 406 Q-------PGKQNLPGAEEGDGFFYAKLIK 428 + P LP + DGFF + L K Sbjct: 418 KVKDNRHSPTLTILPSDFDSDGFFISSLKK 447 >UniRef50_C6P2V1 Sun protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2V1_9PROT Length = 424 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 173/423 (40%), Positives = 246/423 (58%), Gaps = 11/423 (2%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 AA+AV +VV G++L+ +L +K ++ ++K LQ+LC+G LR S+L ++++ L+ Sbjct: 8 AAKAVHKVVHGGRNLTQVLSETLRKESKLTAQEKGALQDLCYGTLRYYSRLAYMLDSLLQ 67 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 RP+ + + L+MV +YQL +T+ H + + V A P GL+N VLR + R Sbjct: 68 RPVR--EPLLGSLLMVAIYQLEHTKAGKHVIVDQAVHAAKNTN-PAASGLVNAVLRNYLR 124 Query: 128 QQEELLAEFN-ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 +Q L N ++ Y + W + L+ Y EQ I++A N+ PPM LR+N H + Sbjct: 125 RQSVLREAANQKEESHYAYRQWWINALKAQYGEQAAEIMQAGNRHPPMTLRVNARHTTAP 184 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 + +L + PDA+ LE P PV LP F +GWV+VQDA AQ +L + Sbjct: 185 GYQTVLAAQDIAAQIVE--PDALILECPVPVEKLPKFNEGWVSVQDAGAQYAAHFLDVHD 242 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 G +LD CAAPGGKT H+LE+A + +++AVD DE RL RV +NL+RL + A V GD Sbjct: 243 GMRVLDACAAPGGKTAHLLELA-DIELLAVDKDELRLGRVRENLQRLKLDAQVVCGDAAS 301 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 P W + F+RIL D PCSA+GV+RRHPDIKWLRR DI A Q+++L+++W L + Sbjct: 302 PEDWWDGKAFERILADVPCSASGVVRRHPDIKWLRRQEDIANFAVQQAQVLESLWSLLAS 361 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 G L+YATCSV EN + FL R DA E Q LP E DGFFYA L Sbjct: 362 DGKLLYATCSVFARENQQVVAEFLARHDDASKIELSATGMIDGQLLPDRE-HDGFFYALL 420 Query: 427 IKK 429 K+ Sbjct: 421 HKQ 423 >UniRef50_A5KNU7 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5KNU7_9FIRM Length = 456 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 117/455 (25%), Positives = 209/455 (45%), Gaps = 27/455 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M K N R + A + +V E G+ +L + K + +++A + + G L +++ Sbjct: 1 MAKAINEREIVAAILMEVTENGRYSHIVLREVLTKYQYLEKRERAFITRVTEGTLEHMTE 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKG 116 +D++++ + + + ++ +YQ+ Y IP HA +E+V+ A+ L+G Sbjct: 61 IDYILDCFSKVKVKKMKPLIRAILRSAVYQIKYMDSIPDHAVCSESVKLAVKKGFSGLRG 120 Query: 117 LINGVLRQFQRQQEEL---LAEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRP 172 +NGVLR + +E+ RY P W+++ ++ Y +++++ Sbjct: 121 YVNGVLRSVVKGIDEVEYPSDPIKRLSVRYSCPEWIIRLWKETYDLSLIETMLKDFQTEK 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P +R R+ + + L+E + H DA+ + + +L F +G VQD Sbjct: 181 PTTIRRCRSRITMEQLKKRLEEEHVLVENHPYLKDALLISKYDYLESLETFREGLFVVQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE--VAPE-----AQVVAVDIDEQRLSR 285 S+ Q G ++DLCAAPGGK + E + V A D+ E ++S Sbjct: 241 ISSMLVGELAHVQAGAQVIDLCAAPGGKALDVAERILMEGQAGCSGHVEARDLTEYKVSL 300 Query: 286 VYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 + +N++R+G+ + D ++ D PCS GV+ + D+K+ Sbjct: 301 IEENIERMGLCNVTAVCQDASVYDEKSAGKADIVIADLPCSGLGVLGKKTDLKYKASPEG 360 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA--------- 396 I L +LQ +IL ++K GG L+Y+TC+V P+EN + FL+ + Sbjct: 361 IVSLVKLQRKILSCAASYVKPGGELLYSTCTVNPKENIENVHWFLKEFPEFYADDIREDL 420 Query: 397 --ELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 EL E+ T E Q LPG + DGFF A+L KK Sbjct: 421 CLELRESVT-ENGCIQLLPGVHKSDGFFIARLRKK 454 >UniRef50_UPI0001C36EDB sun protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EDB Length = 443 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 116/444 (26%), Positives = 205/444 (46%), Gaps = 23/444 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 + R A + +++ G + L + +S +DK L +GV+ LD ++ Sbjct: 3 DPRYTAVKLLDKTFRSGSYSNIQLDAGLKNSDLSPQDKRFCTALYYGVIERKITLDHILT 62 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 L +RP++ + ++ G+YQLLY +P +AA+ E+V+ A + G++N VL Sbjct: 63 GLSSRPLSKLDSIIITILRCGIYQLLYMENVPDNAAVNESVKLAKKFGKTSASGMVNAVL 122 Query: 123 RQFQRQQEEL---LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRI 178 R F R+ ++ E Y P+ L++ + Y E + + + P ++R+ Sbjct: 123 RNFIRKGKKYDMSKNEIERMSVEYSIPAELIESVVNDYGMENAKDLFVDSLGEAPTFIRV 182 Query: 179 NRTHHS-RDSWLALLDEAGMKGF--PHADYPDAVRLETPAPVHALPG---FEDGWVTVQD 232 N D L++ G + F P ++ ++ L F G VQD Sbjct: 183 NNIGDDEADEDREFLEKWGDRSFFEKSPLLPHCYKVNDKVGLYNLESNDMFIMGLFHVQD 242 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLK 291 ++Q C +AP + +LD+CAAPGGKT + E+ + Q+ A D+ + R+ + + Sbjct: 243 LASQLCCAAVAPTENDIVLDMCAAPGGKTFTMAEMMDGKGQIYAFDLHKHRVGLIEEGAA 302 Query: 292 RLGMKATVKQGDGRYPSQWCGE-QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RL + + + R +++ + + +IL D PCS GVIR+ P+I++ + D L Sbjct: 303 RLELSN--VKAEARDATKYYDDIPKATKILCDVPCSGYGVIRKKPEIRY-KSISDFERLP 359 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-----E 405 ++Q +I + +L GG +VY+TC+V EN ++ L + EL E P Sbjct: 360 EIQYKIAENALNYLADGGEMVYSTCTVRKAENEDVVQRLLANHPELELAELPQPLGSVFS 419 Query: 406 QPGKQNLPGAEEGDGFFYAKLIKK 429 P DGFF AKL +K Sbjct: 420 GGMAAIFPHHFGSDGFFIAKLRRK 443 >UniRef50_A8SLL0 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLL0_9FIRM Length = 434 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 118/432 (27%), Positives = 210/432 (48%), Gaps = 10/432 (2%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +R +A + + ++ ++ + +N+L + +SD D L+E+ +G L LD++I KL Sbjct: 1 MRKLAIEILCEIKDENSNSTNLLNKSTKNISDLDSKFLREIVYGTLENRIYLDYIIKKLC 60 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + + ++ + +YQ+++ +IP A + E V K + +NG LR F Sbjct: 61 KLRIKKFNPYILNILRISIYQIIFMDKIPEFAIINEAVNLTKVFKLKKFSSFVNGSLRNF 120 Query: 126 QRQQEELL-----AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 R +E+ + +E A +Y ++K L Y E+ I+E + +P +RI+ Sbjct: 121 LRNKEDFMKIKVESEEEAISIKYSANMDIVKLLLGDYGREETIKILENSMTKPHFAIRIS 180 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 + + + L++ G K +E P + F+ G TVQD + Sbjct: 181 SFEKTEEKVVKDLEKDGYKLKKSEISKLTYFVENPTNILETESFKSGDFTVQDVGSILTG 240 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 LAP+ +LD+C+APGGKT H+ ++ ++ A DI + +L ++ +N KRL ++ Sbjct: 241 EILAPKENSKVLDICSAPGGKTCHLAFQMKNSGEIFANDIVKSKLKKIEENCKRLNVQNV 300 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + ++QF IL D CS GV+ R P+IK R I E+ +LQ +I D Sbjct: 301 KLLNFDASIYKEEYKEQFGYILCDVICSGIGVMDRKPEIKLFRSQETIDEIIELQRKIFD 360 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL--CETGTPEQPGKQNLPGAE 416 +LK G +VY+TCSVL EN +K FL++ + ++ E + + LP + Sbjct: 361 NAVEYLKDKGEIVYSTCSVLKCENEENVKYFLEKHKNLKIKDVEFLGKSEKFIKLLPEKQ 420 Query: 417 EGDGFFYAKLIK 428 + +GFF K +K Sbjct: 421 KHNGFFIIKFVK 432 >UniRef50_A0LDW0 Sun protein n=2 Tax=cellular organisms RepID=A0LDW0_MAGSM Length = 452 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 147/450 (32%), Positives = 224/450 (49%), Gaps = 27/450 (6%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQL 58 K + R+MAA AV ++ + L L Q S + + E+ G +R ++ L Sbjct: 3 KSHVSERTMAAAAVSAMLSEHLPLETALEQQIHQQSGTSPEMRGRAHEIVVGTIRHMALL 62 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGL 117 + + + M + + K V +++ LYQ + R P H+A+ E V+ R L G Sbjct: 63 EATLTRFMQKDLKAKHHYVRAVLLTALYQAQFMRTPIHSAVDEAVKLVKQQPRDHNLSGF 122 Query: 118 INGVLRQ-----FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 +N VLR+ + RY HP WL+KR +K E ++ + A N + Sbjct: 123 VNAVLRRSTEVELSTTWSAVKDPLKRLATRYSHPLWLVKRWEKRLGMEATEARLAAANAQ 182 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P+ LRI+ + +LA +A ++ + + + L A V LPG+ +GW VQ Sbjct: 183 APLTLRIHTPKVTVADYLAAAKQAEIEVTVCPEAEETLMLPQGAKVATLPGYSNGWFAVQ 242 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNL 290 D +AQ LAPQ GE ILD CAAPGGK+ H++ + V+ A+D +QRL R+ +N+ Sbjct: 243 DRAAQAVARLLAPQAGEAILDACAAPGGKSAHLVALGGAGVVITALDSAQQRLERMGENM 302 Query: 291 KRLGMKATV--KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 RLG+++ V + D P E FDR L+DAPC+ TGVIRRHPDIKW R + E Sbjct: 303 ARLGIRSQVKLRCADATQP----IEGLFDRALVDAPCTGTGVIRRHPDIKWRRNPSGLAE 358 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----------L 398 + + Q +IL ++ +K GG LVYATCS+ P+EN Q+ FL+ + + Sbjct: 359 VVKQQQQILQSVAAAVKPGGLLVYATCSLEPDENEQQVARFLKEHPQWKRLPLEAGMAGI 418 Query: 399 CETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + P DGF+ A+LIK Sbjct: 419 LPEWIDSAGDLRTEPATHGVDGFYAARLIK 448 >UniRef50_B5YF43 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Dictyoglomus RepID=B5YF43_DICT6 Length = 430 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 116/430 (26%), Positives = 205/430 (47%), Gaps = 15/430 (3%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +R AA+ + + ++ L+ +L +S K+K + EL +GV R + LD++ ++ Sbjct: 3 VRLKAAEILYDLEKREAYLNLLLRSRLPSYNLSLKEKHFITELVYGVTRWKTTLDYIWSR 62 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTR---IPPHAALAETVEGAIAIKRPQLKGLINGV 121 + R L+ + Y + + + +P A+ E VE A K P+ LIN V Sbjct: 63 FVKR--DNLSLFGRILLRLVAYHIYFLKDTILP--IAVNEIVEIAKR-KVPKEAKLINAV 117 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINR 180 R+ +++ L RY P ++ + Q + + I+ N+ + +R+N Sbjct: 118 SRRMVKERNNLDLNLIPFHIRYAIPEFIFEEWQDYIGKGEAVKILGWLNKAHNIAIRVNT 177 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 S + L E G+K A+ +E F +G+ +Q ++ Sbjct: 178 LKISVEDLKEKLKERGIKFKDGNLVTQALLIEDGFDFEKSDLFHNGYFVIQSEASMLPAL 237 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L P+ G ++DLC+APG K+TH+ E+ ++V+VDI++ R+ V +N KRLG+ Sbjct: 238 ILNPEPGSRVIDLCSAPGLKSTHLAELMNNKGKIVSVDINKNRVKLVEENAKRLGISIIE 297 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 + FDR+LLDAPCS GVI P+IKW + DI +L+++Q ++L+ Sbjct: 298 TLAEDVLNLPDSLNGTFDRVLLDAPCSGLGVISHKPEIKWRLKREDIYKLSEMQIKMLER 357 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET---GTPEQPGKQNLPGAE 416 LK GG +VY+TC++ EN + FL+R + +L + G + +P Sbjct: 358 AGKLLKKGGRMVYSTCTITWHENENVVLYFLERNPEFKLIDFFYKGEKFPGIMRVIPYKY 417 Query: 417 EGDGFFYAKL 426 + DGFF + + Sbjct: 418 KTDGFFISLI 427 >UniRef50_A5EWM0 RRNA SAM-dependent methyltransferase, Fmu n=2 Tax=Cardiobacteriaceae RepID=A5EWM0_DICNV Length = 418 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 174/427 (40%), Positives = 236/427 (55%), Gaps = 17/427 (3%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R AA+ + V+EQ QSL+ +LP + ++ D D+AL QEL +G LR L +L N+L+ Sbjct: 3 AREAAARTLFAVIEQRQSLNQLLPAFKNQLPDIDRALYQELVYGTLREYRSLSFLHNRLL 62 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P+ ++ +G+YQLL + H + ETVE ++ P + GL N VLR+ Q Sbjct: 63 HQPLDK-NPLPAIILNLGIYQLLRLTLGDHGVVHETVELCKKLRCPAVSGLTNAVLRRVQ 121 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 R++ L + AR P+WLL QK V+A RPPM +R+ R + Sbjct: 122 RERSACLQILEENKAR-NIPAWLLPAYQKDGD------VDAFIMRPPMTVRV-RLPQTAT 173 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 W+A G + + AV V LP F G V+VQDA AQ T L P+ Sbjct: 174 QWIAQ---HGANARLNPLHQQAVTFNQAIGVEDLPDFASGGVSVQDAMAQWAATLLQPRA 230 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 GE ILD CAAPGGKT H+LE+AP+ ++A+D RL RV +NLKRL + A + D Sbjct: 231 GERILDACAAPGGKTGHLLELAPQCTLIALDHAADRLERVQENLKRLHLNAHCQTADAAD 290 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 + W FD ILLDAPCS +GVIRRHPDI WLR D D+ +L + Q +LD +W LK Sbjct: 291 LASWYDGHAFDAILLDAPCSGSGVIRRHPDIAWLRSDSDLKQLPKTQYRLLDTLWQTLKI 350 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDGFF 422 GG L+Y TCS+LP EN I+ FL +A+L G G + P A +GDGFF Sbjct: 351 GGRLLYTTCSILPRENQQLIEQFLYTHREAQLRPITLPKGLDTGHGWLHYPDA-DGDGFF 409 Query: 423 YAKLIKK 429 YA L K+ Sbjct: 410 YALLEKR 416 >UniRef50_Q0VTE3 tRNA and rRNA cytosine-C5-methylase, putative n=2 Tax=Alcanivorax RepID=Q0VTE3_ALCBS Length = 447 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 163/430 (37%), Positives = 229/430 (53%), Gaps = 12/430 (2%) Query: 6 NLRSMAAQAVEQVV---EQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 + R A +A+ +V+ G+SL +L + D ++++CFGV R L L+ + Sbjct: 15 DPRLSAVRALNRVLPGKGDGESLREVLRDF--PLQGSDGGQMRDICFGVCRHLRPLNHWL 72 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 N+ +++P+ G + V ++ GLY+L ++ P HA + + +K P GL N VL Sbjct: 73 NQQLSKPLKGSAQPVRLALLAGLYELWFSNRPAHAIVNAYPQLCRKLKAPWAAGLSNAVL 132 Query: 123 RQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 R+ + E + + P WL KR +K +P ++ AN Q PP LR+NR Sbjct: 133 RKASQITLEQAVADAPINIQLSLPDWLFKRWEKDWPNNADAMARANLQTPPFTLRVNRQQ 192 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R +A L G P ++ L+ PV LPGFE G ++VQD +AQ L Sbjct: 193 QQRADAIAAL---GEGARAGYIAPYSIYLQPARPVLQLPGFEQGALSVQDEAAQLPAELL 249 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 ILD CAAPGGKT + E P A + A++++ +RL+R+ +NL RLG T+ QG Sbjct: 250 QAPAKGRILDACAAPGGKTGQLREKFPAADLSALELEGKRLARIRENLARLGTDVTLLQG 309 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 D P W FD ILLDAPCSATG++RR PD+KW R+ DI L LQ+ +LDA+WP Sbjct: 310 DASDPKTWWDGTPFDAILLDAPCSATGILRRQPDVKWHRKASDIGVLVDLQARMLDALWP 369 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEEG 418 LK GG LVYATCSVL +EN Q++ FLQR A E T G Q P Sbjct: 370 LLKPGGMLVYATCSVLRDENDHQVRNFLQRQPQARDVTPRPEGATMVDAGWQLFPEQHGP 429 Query: 419 DGFFYAKLIK 428 DGF+ A L K Sbjct: 430 DGFYLACLRK 439 >UniRef50_B0MPP7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPP7_9FIRM Length = 439 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 121/439 (27%), Positives = 202/439 (46%), Gaps = 18/439 (4%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 + R + + ++ QG + IL Q +DKA L +GVL LD+LI Sbjct: 2 KTARQITLDLLIRMDTQGAYSNIILDHAFTQNDADRRDKAFSAALFYGVLERRMTLDYLI 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + V ++ +G YQLL+ +P AA+ E+V + KG +N + Sbjct: 62 RYYSGIEFDKIKTAVVEILRMGFYQLLFMNSVPDSAAVNESVALCDYCNSTKAKGYVNAI 121 Query: 122 LRQFQRQQEEL----LAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWL 176 LR F R ++++ L Y P WL+K+ EQ ++ + RPP++ Sbjct: 122 LRTFLRNEKQIDYGNLTGEAKLSIEYSCPKWLVKKWNSELGEQRAMQMINSCFGRPPIYA 181 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 R+N ++ D + L+ G+ ++ + L + ++ G +QD S+Q Sbjct: 182 RVNTVRYTVDDVIGELESEGISAAKNSLIDACIELANTKGIEQSSAYKKGMFHIQDISSQ 241 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM 295 C AP E ++DLC+APGGKT E+ ++ + D+ + ++S + + KRLG+ Sbjct: 242 ICCKIAAPVFNETVVDLCSAPGGKTFTCAEIMNDRGRIYSYDLYDGKVSVIANTAKRLGL 301 Query: 296 KATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + D + + DR++ D PCS GVIRR P+IK+ + + + L Q Sbjct: 302 TIITAAENDATKFNPDIPKA--DRVICDVPCSGLGVIRRKPEIKY-KPMKQLETLPDTQR 358 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-----GTPEQPGK 409 +I++ ++K GGTLVY+TC+V EN + FL+ +D G + + Sbjct: 359 KIINNAAEYVKPGGTLVYSTCTVSRTENDDIVDEFLKEHSDFVPVVVPLNIKGLEDSYKR 418 Query: 410 QNLPGAEEGDGFFYAKLIK 428 LP GDGFF A L K Sbjct: 419 TMLPCDVNGDGFFTATLRK 437 >UniRef50_B0MGA0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MGA0_9FIRM Length = 448 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 123/451 (27%), Positives = 212/451 (47%), Gaps = 33/451 (7%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKV---SDKDKALLQELCFGVLRTLSQLDWL 61 +N R +A + ++ ++ + + +K KD+A LC G L +D++ Sbjct: 2 QNPRELALDVLMKIDKKEELSHIAIGETLEKYQFSEKKDRAFFTRLCQGTLERRLTIDYV 61 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLING 120 I+ + + V L+ +G Q+L+ IP AA E V+ A +L G +NG Sbjct: 62 IDLYSKTKVRKMKPLVRSLLRMGACQILFMDHIPDSAACNECVKLAKKRGFSKLSGFVNG 121 Query: 121 VLRQFQRQQEELLAEFNASD-ARY-----LHPSWLLKRLQKAYPE-QWQSIVEANNQRPP 173 VLR RQ++E+ D +Y P W+++ ++Y E + ++IV + + Sbjct: 122 VLRTISRQKQEIPFPDRNKDFEKYLSVACSMPEWIIRHFLRSYSEAETETIVSSFLEPKK 181 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 + + SR+ +A L++ G K P+A+R+ + L F +G VQD Sbjct: 182 TTVSWMESSGSREELIASLEKDGAKVEDGKLLPEALRISHYDFLRRLTSFREGRFIVQDE 241 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKR 292 S+ P+ G+ ILD+C+APGGK + + + QV+A D+ E + + +N++R Sbjct: 242 SSMLAGKAADPKEGQKILDMCSAPGGKALYAADKLHGTGQVLARDLTEYKEELLKENIER 301 Query: 293 LGMKATVKQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 +G + Q D R P + E D +L D PCS G++ + DIK+ + + +L + Sbjct: 302 VGFENIRTQIWDARIPDERLAESM-DVVLCDVPCSGLGIMGKKQDIKYNLEESALEDLVK 360 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKA--------------FLQRTADAE 397 LQ EIL ++K GG+L+++TC++ P+EN + FL T D + Sbjct: 361 LQREILKTALTYVKPGGSLLFSTCTINPKENEENFRWLAGQTGFEPEDLTPFLPETLDIK 420 Query: 398 LCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + G Q LPG DGFF KL + Sbjct: 421 TVKEGY-----IQLLPGIHPCDGFFIGKLRR 446 >UniRef50_C5RAE2 RNA methyltransferase n=3 Tax=Lactobacillales RepID=C5RAE2_WEIPA Length = 456 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 132/444 (29%), Positives = 212/444 (47%), Gaps = 23/444 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R+++ + +E+V + G + L + ++ +S+K+ L+ + +GV++ L++ + Sbjct: 16 NPRALSVRVLEKV-QNGAYSNLQLDSMIKQADLSEKNVHLMTTMVYGVIQHRLTLEYWLI 74 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + +P + V L+ + ++Q+ Y +IP HA E + A + + GVL Sbjct: 75 PFIKQP-QKLESWVRELLYISIFQMQYLDKIPDHAIFDEAINIAKRRGHDGTRKFVTGVL 133 Query: 123 RQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 QRQ E++ E + P WL++ L + SI N P +R Sbjct: 134 HAIQRQGLPDFEDIKDETKRLSIKTSLPLWLIETLNGQLGWPKTVSIASTINAAPSQSVR 193 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 +NR S + LL+ G + P PDA+ + V F DG +T+QD SA Sbjct: 194 VNRELISPTDLIKLLENDGYQVTPSEVTPDALLVSGGH-VAGSQAFHDGLLTLQDESAML 252 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHIL---EVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 + L G+ +LD AAPGGKTT I E VVA+DI + + + +N RL Sbjct: 253 MVPSLDVHPGDKVLDAAAAPGGKTTQIATYLEKTQGGHVVALDIHDHKAKLIKENATRLQ 312 Query: 295 M--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + + + D R + ++ FDRIL+DAPCS G++RR P+I++ + +D +L ++ Sbjct: 313 VADRIETQVLDARKVDEKFKDETFDRILVDAPCSGFGLLRRKPEIRYEKSLKDSYQLQKI 372 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-------TPE 405 Q ILDA+ LK GG LVY TC++L EN I FL D +L T Sbjct: 373 QLSILDAVANKLKKGGRLVYGTCTILSTENEDVINEFLAAHNDFKLVPTKTVNNLDVLDT 432 Query: 406 QPGKQNLPGAEEGDGFFYAKLIKK 429 Q P DGFF A L+K+ Sbjct: 433 QGMLHVYPDDFGSDGFFIATLVKQ 456 >UniRef50_B9XT31 Sun protein n=1 Tax=bacterium Ellin514 RepID=B9XT31_9BACT Length = 444 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 145/436 (33%), Positives = 222/436 (50%), Gaps = 24/436 (5%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A + + + + Q + N+L + ++S D+ L QEL +G++R L+WLI++ Sbjct: 15 PRQIAVRVLTERLSQEEYTENLLEIELSRARLSAPDRGLCQELVYGIVRWQETLNWLIDR 74 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 ++ + L+ +GLYQ+ + RIP HAA+ ETVE A + G +N VLR Sbjct: 75 --KTEGRRQKPEMQVLLQLGLYQMFWLDRIPNHAAVHETVEIAKELGFVAQSGFVNAVLR 132 Query: 124 QFQRQQ---EELLAEFN--ASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 + R++ E+LL E Y HP W+ +R + Y E ++E NN + R Sbjct: 133 GYLRERVETEKLLEEVKIAQPQIGYSHPEWVYQRWLERYGAEHTAKLMEWNNTPARTYAR 192 Query: 178 INRTHHSRDSWLALLDEAGMKGFP--HADYPDAVR--LETPAPVHALPGFEDGWVTVQDA 233 IN A + G+K P + D + LE+ P+ L F+DG+ +QD Sbjct: 193 INTLKADAAKVTAQWETEGVKFIPRQYDWIEDGLIFELESHPPLAGLKSFKDGFFYIQDP 252 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKR 292 S + L + +LDLCAAPGGKTT I + + Q+VA DI + RL+ + +N R Sbjct: 253 STLLSVRELDVKAAHSVLDLCAAPGGKTTMIAQQMQNRGQIVAQDISDDRLALLRENYVR 312 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 LG+ V Q+FDR+L+DAPCS TGV+RR D++W + ++ L + Sbjct: 313 LGVTCVVASI-APNAVIANPAQRFDRVLIDAPCSNTGVMRRRVDLRWRIQPEEVERLRET 371 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412 Q E+L P LK G +VY+TCS+ PEENS ++ FL D EL +Q Sbjct: 372 QLELLRRAAPRLKPNGIMVYSTCSLEPEENSQVVQQFLSENPDFELKSE-------RQLT 424 Query: 413 PGAEEGDGFFYAKLIK 428 P + DG + AKLI+ Sbjct: 425 PFGNDVDGAYTAKLIR 440 >UniRef50_Q2YC21 Sun protein n=7 Tax=Betaproteobacteria RepID=Q2YC21_NITMU Length = 442 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 179/441 (40%), Positives = 258/441 (58%), Gaps = 26/441 (5%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 +AA VE+VV G SL+ +L +SD+ + +Q+L +GVLR QLD L+ L Sbjct: 6 RLAATTVERVV-SGASLTTVLQETWRSHSGLSDQQRGAIQDLSYGVLRFYGQLDILLGLL 64 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGA----------IAIKRPQ-- 113 + +P+ +++ YL++VGLYQL Y++ PH + V + + P+ Sbjct: 65 LNKPLK--DQSLRYLLLVGLYQLQYSKTAPHVVVDSAVSASCSPSIDGRNSRNMLDPRHA 122 Query: 114 --LKGLINGVLRQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQ 170 + GL+N +LR F R++ LL + A++ RY HP W + +L+ YP ++Q+++E N Sbjct: 123 KSIGGLVNAILRNFLRKRPALLEKTAATEVGRYSHPQWWIDKLRAQYPSRYQAVLETANI 182 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGF--PHADYPDAVRLETPAPVHALPGFEDGWV 228 RPPM LR+N+ + +++ LL AG+ + +A+ L P PV LPGF G V Sbjct: 183 RPPMALRVNQRRTNVEAYQKLLHNAGLNARRPENEWTEEALELFHPVPVEKLPGFGQGLV 242 Query: 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYD 288 +VQD +AQ L PQ+G +LD CAAPGGK+ H+LE+ AVD D +RL R+ Sbjct: 243 SVQDVAAQMAAPLLCPQSGMRVLDACAAPGGKSAHLLELTDLEL-TAVDNDGERLERLKQ 301 Query: 289 NLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 N RLG+K + GD +P +W + FDRIL DAPCSA+GV+RRHPDIKWLRR+ D+ Sbjct: 302 NFTRLGLKPYRIIHGDATHPGEWWDGRPFDRILADAPCSASGVVRRHPDIKWLRRESDLA 361 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP 407 + A++Q + LDA+W L GG L+Y TCS+ EEN LQ+++FL DA L PE Sbjct: 362 QFAEIQRKTLDALWQTLVKGGKLLYVTCSIFAEENGLQVESFLNHHPDARLLPFSVPEIV 421 Query: 408 GKQNLPGAEEGDGFFYAKLIK 428 Q LP DGFFYA L K Sbjct: 422 EGQLLPDLH-HDGFFYALLEK 441 >UniRef50_C3RII4 SUN protein n=10 Tax=Bacteria RepID=C3RII4_9MOLU Length = 417 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 121/431 (28%), Positives = 204/431 (47%), Gaps = 26/431 (6%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R+ A + + + L+ L +K +S DK L + +G ++ L++ + Sbjct: 2 ARTTALDVLIKYQNEQSYLNITLNDYLEKSLLSRNDKDLATRIVYGTIQNKLYLEYQLAP 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + ++++ LYQL++ ++P +A + E V A +N +LR Sbjct: 62 YIQG--KKIKNREKMILLMSLYQLIFLDKVPDYAVIDEAVRLAKKRDNF-AGKFVNAILR 118 Query: 124 QFQRQQE---ELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRIN 179 F R + + E HP W++K L K Y + I + +N P R+N Sbjct: 119 NFLRNGKCEIDEKDELKRISIETSHPLWIVKMLSKQYDLNIAKKICQHDNTPPTRAARVN 178 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 ++ LL + + PD + L + F++G VT+QD S+Q Sbjct: 179 ILKTTK---AQLLTDENFEV--GNLSPDGL-LYRAGNIANTDYFKNGLVTIQDESSQLIA 232 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L PQ + +LD+C APG KTTH+ + +++A D+ E ++ V NLKRLG+ Sbjct: 233 PLLDPQPTDLVLDMCCAPGSKTTHLAAIMNNQGKIIAYDLFEHKIKLVEANLKRLGVNNV 292 Query: 299 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + GD + E+ FD+ILLDAPCS GV++R P+IK+ + + LQ+++L Sbjct: 293 ELHVGDATLLKEKYSEESFDKILLDAPCSGLGVMKRKPEIKYHDSGA-MDTIIPLQAKLL 351 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 D + LK G +VY+TC++ +EN IK FL + D ++ E K+ LP + Sbjct: 352 DNAYYLLKKNGKMVYSTCTINKKENEQMIKQFLDKYPDMKIIEE-------KKILPYVYD 404 Query: 418 GDGFFYAKLIK 428 DGF+ KL K Sbjct: 405 SDGFYMCKLEK 415 >UniRef50_C4FT85 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT85_9FIRM Length = 457 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 143/448 (31%), Positives = 221/448 (49%), Gaps = 27/448 (6%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWL 61 + N+R A Q + ++ Q + +L Q ++ D+ LL L +G ++ LD+ Sbjct: 12 KHNVRFQALQLLVEIDWHDQYSNVLLNRALSQSELKPVDQGLLVNLVYGSIQHRLTLDFY 71 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLING 120 + + + + L+ + YQ+LY RIP HAA+ E V A L GL+NG Sbjct: 72 LEPFIKG--KKLEPWIRSLLRMTAYQMLYLERIPDHAAINEAVNIAKLNGHAGLAGLVNG 129 Query: 121 VLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMW 175 VLR F+RQ+ + + A +Y W++ LQK Y + ++ + NQRP + Sbjct: 130 VLRNFRRQELRSLDSVTDPIEALSIQYSVAPWIVALLQKQYDQASLADLLASLNQRPRLT 189 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 RI + RD LA L AG + P A+ + P F+ G +T+QD S+ Sbjct: 190 ARIQAHPNERDQILAQLRAAGYQVEAGNLSPYAIE-SLDGRIIESPAFQAGRLTIQDESS 248 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM 295 P G+ +LD C+APGGK TH+ + + A+DI + +L V +++RLG+ Sbjct: 249 MLVAPIGRPVAGQRLLDACSAPGGKATHMAFLLQNGHLDALDISQAKLDLVAGHMERLGL 308 Query: 296 ------KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 ++ D G +D I LDAPCS G++RR P+IK+ ++ DI L Sbjct: 309 SQQEGLTISLHATDALDFMPPSGT-LYDIIYLDAPCSGLGLMRRKPEIKYTKQASDIEAL 367 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG- 408 + LQS++LD + LK GGTLVY+TC++ EN Q+KAFL R +D +L G E G Sbjct: 368 SMLQSQLLDHVASLLKPGGTLVYSTCTLAQAENQDQVKAFLARQSDFQLSPIGPEEVQGA 427 Query: 409 --------KQNLPGAEEGDGFFYAKLIK 428 + LP DGFF A++ K Sbjct: 428 SVLTADGMIEVLPQDYLTDGFFIARMTK 455 >UniRef50_Q03FY2 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Pediococcus RepID=Q03FY2_PEDPA Length = 444 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 131/445 (29%), Positives = 218/445 (48%), Gaps = 20/445 (4%) Query: 1 MKKQRN-LRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQ 57 M Q N R++A +E++ ++G + L + D DK LL E+ +GVL+ Sbjct: 1 MTNQNNSARNLAVDILEKI-DEGSFSNIQLNQDIKSSSLIDIDKNLLTEIVYGVLQHRLT 59 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKG 116 LD+ + + +P R V L+ ++Q+ + R+P A E++E A ++ Sbjct: 60 LDFYLADYIRKP-EMTPRWVINLLRTAVFQMEFLDRVPDFAIFNESIEIAKLRGNDGIRK 118 Query: 117 LINGVLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQR 171 ++ GVLR +QR + + +Y W++ ++ E+ SI+++ NQ Sbjct: 119 MVTGVLRSYQRNGKPSFDSIKNPVEKLSTQYSVAPWIVDQMLYELGEEKCISILKSINQP 178 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 + +RINR + + + L+ A D +RL A + + DG +TVQ Sbjct: 179 SHLAVRINRWNKTHADIIKDLEYE-YTVTTSAIAKDGLRLSKGASISDTRSYIDGDLTVQ 237 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNL 290 D SA + + G+ +LD CAAPGGKTT I + +V DI ++R+ + DN Sbjct: 238 DESAMLVAETMHLEKGQKVLDACAAPGGKTTQIAAMIGETGEVTGWDIYQKRVQLIQDNA 297 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 +R+ ++ + + ++ FDRIL+DAPCS G++RR P+I++L+ +D +L Sbjct: 298 QRMHLENVKTEVQDAIAPREDLDESFDRILVDAPCSGIGLMRRKPEIRYLKSKKDSSDLH 357 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------ 404 QLQ +ILD I LK GG L Y+TC++L +EN I+ FL + E + T Sbjct: 358 QLQLKILDNIAKMLKVGGVLTYSTCTILRKENQETIEKFLAIHPEFEQLKVETAKKIKQN 417 Query: 405 -EQPGKQNLPGAEEGDGFFYAKLIK 428 ++ P E DGFF A L K Sbjct: 418 RDELSLNIYPDDFESDGFFIANLKK 442 >UniRef50_Q1DCG5 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Cystobacterineae RepID=Q1DCG5_MYXXD Length = 438 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 136/441 (30%), Positives = 215/441 (48%), Gaps = 24/441 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKV---SDKDKALLQELCFGVLRTLSQLDWLI 62 N R++A Q + +V L+ +L + +D AL+ EL +G R LD+ I Sbjct: 2 NARALAIQVLARVRATDAYLNVVLDTQLSESPPKDPRDAALVTELTYGATRRQLALDYAI 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + R + + V + +G YQ+ +TR+P AA+AETV+ + + G N +L Sbjct: 62 TRFADRKLDALEDKVLAALRIGAYQIFHTRVPARAAVAETVQALKEVGLTRAAGFTNAIL 121 Query: 123 RQFQRQQEELLAEFNA----SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 R+ L + R HP WL++R + + E+ ++++ A+NQ P + +R Sbjct: 122 RKLAALPAPPLPPASDVALHLSVRESHPQWLVERWLRQFGRERAEAMLVADNQAPAVVVR 181 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 N +RD+ LA L E G+ P + L + V + G+ +G VQD +AQ Sbjct: 182 ANTAKVTRDALLAQLQEMGVDAKATTVSPVGITLPSVGRVEDVYGYAEGLWQVQDEAAQL 241 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-- 295 + A +LD CAAPGGK+ H + VVAVD+ +L ++ +RLG+ Sbjct: 242 VGVYGAIPETARVLDACAAPGGKSCHQAQ---SHDVVAVDLHAHKLRKIEAEARRLGLQP 298 Query: 296 --KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 KA +P +W +F L+DAPCS G +RRHP++++ R++ DI LA LQ Sbjct: 299 RLKAYAHDAAEPFPEEW---GEFHAFLVDAPCSGLGTLRRHPELRYRRKEEDISRLATLQ 355 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE------QP 407 IL+ + GG LVYA C++ P+E Q++ FL+ + P Q Sbjct: 356 RRILENCQDAVPPGGLLVYAVCTMEPQEGQDQVEMFLRSHPEWTAEPPVLPGLKLPMSQA 415 Query: 408 GKQNLPGAEEGDGFFYAKLIK 428 + LPG E DGFF A+L K Sbjct: 416 YLRTLPGPEGFDGFFAARLRK 436 >UniRef50_C0XM65 rRNA SAM-dependent methyltransferase RmsB n=3 Tax=Lactobacillus RepID=C0XM65_LACHI Length = 444 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 130/447 (29%), Positives = 224/447 (50%), Gaps = 22/447 (4%) Query: 1 MK-KQRNLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLS 56 MK + N R +A + + + G S SN+ +SD DKAL + +GV++ Sbjct: 1 MKYQTNNPRELAVRTLLRT--SGGSYSNLQINAVIESTSMSDVDKALFTNIVYGVIQHRM 58 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLK 115 L++ + + + + V L+ +YQL Y R+P A E+++ A ++ + Sbjct: 59 TLEYQLVPFL-KDSEKTEDWVKELLYTAMYQLEYLDRVPKRAIFDESIKIAKSMGHDGTR 117 Query: 116 GLINGVL----RQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 + G+L R+ R+ +++ +Y P WL+ ++ ++ + ++ NQ Sbjct: 118 RFVTGILHQMDRKGVREPDKIKDPVKKISIKYSVPEWLVSLIEGQLGKQKADQVFKSLNQ 177 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P +R N+ ++ L +AG + + + ++ VH+ FE+G +T+ Sbjct: 178 TPKQSVRFNKAKTTKSKLTDQLTQAGFQTEDSLVAGEGIIVDKGQVVHS-AFFENGLLTI 236 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNL 290 QD SA + ++ Q + ILD C+APGGKTT I +V+A+DI + +L V N Sbjct: 237 QDESAMLPVESMSIQPDDLILDACSAPGGKTTQIAANLKNGRVIALDIHQNKLKNVIRNA 296 Query: 291 KRLGMKATVKQG--DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 KRLG+ V+ D R + ++ FD IL+DAPCS G++RR P+I++ + DI Sbjct: 297 KRLGVDGVVETQALDARKVDEKFSDEMFDHILVDAPCSGFGLMRRKPEIRYDKTLADINH 356 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET------G 402 L+Q+Q +IL+A+ P +KTGGT+ Y+TC+++ +EN IK FL D ++ T Sbjct: 357 LSQIQLQILEAVAPKVKTGGTITYSTCTIVQQENQEVIKQFLDAHPDFQIEPTKTDLNLT 416 Query: 403 TPEQPGKQNLPGAEEGDGFFYAKLIKK 429 T E P DGFF L++K Sbjct: 417 TDENGMINIYPDDFGSDGFFVCSLVRK 443 >UniRef50_UPI0001BC34B4 sun protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC34B4 Length = 443 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 109/445 (24%), Positives = 206/445 (46%), Gaps = 18/445 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M + N R++ A+ ++ E+ + +LP + +K + + D++ + G + Sbjct: 1 MNQNVNTRNIILDALIEINEKDRFTHIVLPEVLKKYQYLDNIDRSFISRTILGTVERKIT 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKG 116 LD++IN P+ + + ++ + YQL+Y + A E V ++ LKG Sbjct: 61 LDYIINLFSKTPVNKMKPVIRNILRMSTYQLIYMEGVKDFAVCNEAVRLSVKKGFTALKG 120 Query: 117 LINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 +NGVLR R++ ++ +Y P W++ + K Y E ++I++A + P+ Sbjct: 121 FVNGVLRTIAREKNKIEMP-QELWLKYSTPGWIVDKWLKEYGKENTEAILKAQYSKRPLT 179 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R N H +R+ + L ++ + A+ +E ++ L F +G VQD S+ Sbjct: 180 VRCNFNHCTREELVKRLTAENVRAKVIEEPDCALEIEGFDYLNKLNTFANGDFFVQDLSS 239 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG 294 + P+ +++DLCAAPGGK+ HI E V A D+ + ++ + +N+ RL Sbjct: 240 MMVCYAINPEKDSYVIDLCAAPGGKSLHIAEFMDNTGFVEARDVSDNKVMMINENIDRLN 299 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + ++ D ++ D PCS G++ + PDIK+ + EL++LQ Sbjct: 300 LCNIKAVVKDATVKWEDSVEKADVVIADLPCSGLGILNKKPDIKYHASEEKCHELSELQK 359 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG--TPE------- 405 +ILD ++K GG ++TC++ EEN ++ L D L + P+ Sbjct: 360 KILDNSKEYVKHGGKFCFSTCTLNYEENMGNVEHILS-YGDYVLVDFEDRVPDNMKKYYK 418 Query: 406 QPGKQNLPGA-EEGDGFFYAKLIKK 429 + + +P DGFF A +K Sbjct: 419 KGILEIIPDENNNFDGFFIALFRRK 443 >UniRef50_D1VSE3 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE3_9FIRM Length = 430 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 125/431 (29%), Positives = 204/431 (47%), Gaps = 11/431 (2%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQ-KVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R A ++ V +G L L ++Q +SD+D ++ + GV+R + LD++I Sbjct: 2 NNIRQKALFIIDNVYNKGAFLEEQLNIIKQSNISDRDFTFIKNITTGVIRNRTYLDYVIK 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + ++ + +YQ + +IP ++ + E+V+ A +N +L Sbjct: 62 INSKIRFKKIHKIIAIILEMAIYQYYFLDKIPNYSIVDESVKLAKLYGNKGSSSFVNAIL 121 Query: 123 RQFQRQQEE---LLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRI 178 R + +E + Y HP + K + Y E +++++ANNQ P +R+ Sbjct: 122 RNIVSKDKEVVKIEDSIENLSVYYSHPKFYTKYFYENYGVELTKNLLKANNQEPDFVIRV 181 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N +D LL + PD++ +E P + F +G+ QD S+ Sbjct: 182 NTLKTKKDHLYKLLKDENFNVI-DGLVPDSLIIENPKNIFDTQAFREGFFYAQDFSSIKV 240 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 L P+ ILDLCAAPGGK+TH+ + Q+VA D +L + DN KRLG+ Sbjct: 241 SQILNPKKNSTILDLCAAPGGKSTHLGAILENTGQIVACDKSLYKLDLIKDNAKRLGVSN 300 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + E +FD L+DAPCSA G+ R+ PDIKW R DI LAQ+Q I+ Sbjct: 301 IKVSINDASKYNNDFEDKFDYCLVDAPCSAIGLYRKKPDIKWNRSLEDIKNLAQIQKNII 360 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 + ++K GG L+Y+TCS+ EN IK FL R + ++ + + P + Sbjct: 361 NNAGRYVKKGGVLIYSTCSLSYSENEGVIKEFLDRNKNYKIL--TIEGKDILKLFPF-DN 417 Query: 418 GDGFFYAKLIK 428 DGF KL + Sbjct: 418 YDGFSICKLQR 428 >UniRef50_A9KM96 Sun protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM96_CLOPH Length = 453 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 122/452 (26%), Positives = 210/452 (46%), Gaps = 30/452 (6%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLI 62 N R + ++ E ++ + +S +D+A + LC GVL +LD+ + Sbjct: 2 NAREIVLTMCLKINEDKLPSHVVINETLKNYKDLSKQDRAFISRLCLGVLEQKLRLDYDL 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + + + + ++ + YQ+ + +IP AA E V+ L G +NG+ Sbjct: 62 ERFSKIKVKKMKPVIRNVLRIAAYQIEFMEQIPDSAACDEAVKLVKKRGLGGLSGFVNGI 121 Query: 122 LRQFQRQQEEL-------LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 LR R+ ++ L E +Y P L++ K++ EQ + +++A + Sbjct: 122 LRNLSREFQKANGFDISKLNEIERLSYQYSMPKELVEFWLKSFRREQVEEMLQAFLEPKD 181 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 +RIN + + D + L + G++ A +A R+ + + L F+ G+ VQD Sbjct: 182 TSIRINESKITIDELVDNLVKDGVEVRDGAYLTNAKRITSYNSLPVLDSFQKGYFQVQDE 241 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-------PEAQVVAVDIDEQRLSRV 286 S+ + G++I+D+CAAPGGKT H ++ V A D +++++ + Sbjct: 242 SSMMVGLIAGIKAGDYIIDVCAAPGGKTLHAADLLLVAGGEKNPGHVDARDKTDRKVALI 301 Query: 287 YDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 NL+R+G + VK D P E+ D IL D PCS GVI + PDIK+ Sbjct: 302 EQNLERIGYQNVSVKVFDALVPDDSVKEK-ADIILADLPCSGLGVIGKKPDIKYNMTKEM 360 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAF---LQRTAD------A 396 + ELA+LQ IL + +LK GG L+++TC++ PEEN I+ L+ + Sbjct: 361 MSELAKLQRNILTVVVSYLKPGGVLIFSTCTINPEENEDNIRFITETLKLQPESIDTYLP 420 Query: 397 ELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 E + T +Q Q LP DGFF ++ K Sbjct: 421 ENLQCETSKQGYLQLLPNKSGVDGFFISRFRK 452 >UniRef50_C8WW78 Sun protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW78_ALIAD Length = 451 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 140/449 (31%), Positives = 227/449 (50%), Gaps = 32/449 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R A QA+ +V G L+ L V ++D+AL E+ +G LR LD L++ L Sbjct: 6 RRRAYQALIRVERDGAFLNAALQEALAGAGVDERDRALATEIAYGTLRRQITLDRLLSPL 65 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + RPM+ V ++ +G YQ+ + R+P +AA + VE A RPQ L+N VLR+ Sbjct: 66 VRRPMSKLDPEVRVILRMGAYQMTWLNRVPAYAAANDAVELAKRH-RPQAAALVNAVLRR 124 Query: 125 FQRQQEEL----------LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 + + ++ + Y P+W+++RL + ++ + + + N+ P Sbjct: 125 YAERAQDWEDLLNKAVAGAKDVERWSVMYSVPAWIVERLVADHGADRVLAALASMNEPAP 184 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 M LR NR SR+ +A L G P A D +R++ V L + DG+VT+QD Sbjct: 185 MSLRANRLRGSREEAIARLGAEGAVARPAALAEDGLRVQGQVDVTRLQAYRDGYVTIQDE 244 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKR 292 A L P+ G ++DLCAAPGGKTTH+ E+ ++ A D+ ++ + +R Sbjct: 245 GAMLVAPLLRPEPGMRVVDLCAAPGGKTTHLAELMGDRGEIDAYDVTVAKVRAIRQQAER 304 Query: 293 LGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+++ + GDGR + E +D L+DAPC+ GV+RR PD+++ RR D+ +LAQ Sbjct: 305 LGLQSVHPRLGDGRQVT---PEGLYDAALVDAPCTGLGVMRRRPDLRYRRRPEDVAQLAQ 361 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR-TADAELCETGTP------ 404 LQ +L +++GG +VY+TC++L EEN ++ + + + G Sbjct: 362 LQRALLRRACAIVRSGGCVVYSTCTLLKEENESVVRDVASDPSVGVRIEDIGGDLAPTLA 421 Query: 405 -----EQPGKQNLPGAEEGDGFFYAKLIK 428 PG P E DGFF A+L + Sbjct: 422 VSVGERSPGFLLWPDWHETDGFFMARLRR 450 >UniRef50_D0MH27 Sun protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MH27_RHOM4 Length = 453 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 134/443 (30%), Positives = 220/443 (49%), Gaps = 16/443 (3%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPP-LQQKVSDKDKALLQELCFGVLRTLSQLDW 60 K+ R A + +E++ ++ ++ L ++ + E GV R LD+ Sbjct: 9 KRLDPARREAVRLLERIENDQAYVNRLMSAGLTDELEPEAGRRATEYVAGVTRWRRWLDF 68 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L+ + + + ++ +GLY+LL+T PP+AAL E VE A + RPQ ++N Sbjct: 69 LLAQNYRGRYDSMEPRLRQILRLGLYELLFTDTPPYAALNEAVELARRLVRPQAGAVVNA 128 Query: 121 VLRQFQRQQEELL-----AEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPM 174 VLR RQ++ L RY HP+W+++R Y P ++++ NN+RP Sbjct: 129 VLRSLLRQRDFLPQPQTGDPVEDLAIRYSHPTWIVQRWLARYGPADTEALLRYNNERPWF 188 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 +R+ SR L L + G++ P D +R++ P+ E G + VQD S Sbjct: 189 GVRVRTDRISRHVVLHRLADRGLEAEPSPVLDDFIRVQRLGPLLEDRLIEKGLLAVQDES 248 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRL 293 A + L P E I+D CAAPGGKTT+I + +V+A D+ +R + + Sbjct: 249 AGLAVRLLDPHPDETIVDACAAPGGKTTYIATRMRDHGRVLAFDVHPKRTELIRRAALQQ 308 Query: 294 GMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 G+ + V + D R S+ E Q DR+LLD PCS GV+ + D++W RR ++ EL +L Sbjct: 309 GLTSIVAEALDLRQVSERYPELQADRVLLDVPCSGLGVLAKRADLRWHRRPEELDELVRL 368 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-------TPE 405 Q E+L+A ++ GG LVY+TC++ PEEN +++AFL R + + + Sbjct: 369 QDELLEAAARLMRPGGILVYSTCTIEPEENEARVRAFLARHPEFTVERADAWVPAEMVTD 428 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 + P + DG F A+L + Sbjct: 429 EGFFATWPPRDRMDGAFAARLRR 451 >UniRef50_C5V0U6 Sun protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0U6_9PROT Length = 421 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 181/427 (42%), Positives = 252/427 (59%), Gaps = 14/427 (3%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLI 62 N++ A Q V+QV+E G++L+ +L ++ + +A LQ+L +G LR QL+ ++ Sbjct: 3 NIQLAATQIVQQVMEDGRNLNQVLDESLRRKSVWTPAQRAALQDLSYGTLRFYGQLNAIL 62 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 L+ + MT + YL++V LYQL Y+R HA + V A + P+++GL+N +L Sbjct: 63 ELLLHKHMT--DHRISYLLLVALYQLQYSRAAQHAVVDHAVRSADILN-PKIRGLVNAIL 119 Query: 123 RQFQRQQEELLAEFN-ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 R F R Q +LL + + Y HP W + L+ Y + +I+ A N PPM LR+N Sbjct: 120 RNFLRNQADLLTQAALKDEGHYSHPQWWIDELRAQYGDAADAILIAGNGHPPMTLRVNAQ 179 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 S +LA L + +A++LE P V LPGF DG V+VQDA AQ Sbjct: 180 RGSTPDYLAQLAAQDIPARLIGA--EALQLEKPVSVDKLPGFFDGLVSVQDAGAQYAARL 237 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 L + G +LD CAAPGGKT HILE A + +++A+D D RLSRV +NL+RL + A + Sbjct: 238 LDAKAGMRVLDACAAPGGKTAHILERA-DVELLALDKDAARLSRVKENLQRLTLNAALLT 296 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 GD PS W + F+RIL D PCSATGV+RRHPDIKWLRR +D+ A+ Q EIL+A+W Sbjct: 297 GDAASPSDWWDGRLFERILADVPCSATGVVRRHPDIKWLRRKKDLASFAEQQFEILNALW 356 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 P L GG L+YATCSV +EN + FL +T A+ +TG P G LP +E DGF Sbjct: 357 PLLAPGGLLLYATCSVFKQENQQVVDKFLAQTPAAQQRDTGLP---GGMLLPD-DEHDGF 412 Query: 422 FYAKLIK 428 FYA L K Sbjct: 413 FYALLQK 419 >UniRef50_A1KRE7 SUN-family protein n=32 Tax=Neisseriaceae RepID=A1KRE7_NEIMF Length = 419 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 172/427 (40%), Positives = 246/427 (57%), Gaps = 19/427 (4%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPP---LQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 + +AA ++ V E G++L ++L ++ ++ LQ++ +G R L L ++ Sbjct: 6 AQKLAADSIAAVAE-GRNLQDVLAQIRTAHPDLTAQENGALQDIAYGCQRYLGSLKHMLA 64 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 +++ +P+ + L++ LYQL YTR PHA + E VE I R Q + N +LR Sbjct: 65 QMLKKPID--NPQLESLLLAALYQLHYTRNAPHAVVNEAVESIAKIGRGQYRSFANAILR 122 Query: 124 QFQRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 +F R++++L A D A++ P W + L+ YP+ W +I A PPM LR+NR H Sbjct: 123 RFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKHWHNITAALQSHPPMTLRVNRRH 182 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 + +S+L L G+ +Y AV LE PV+ LPGF DG V+VQD AQ L Sbjct: 183 GNAESYLEKLAAEGIPARALDEY--AVTLEEAVPVNRLPGFSDGIVSVQDFGAQQAAYLL 240 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQ 301 P++GE ILD CAAPGGKT HILE+A + +V A+DID RL RV DN+ RLG A+ Sbjct: 241 NPKDGERILDACAAPGGKTGHILELA-DCRVTALDIDAGRLKRVEDNIARLGFQTASAAC 299 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 D R + W + FD IL D PC+A+GV RR+PD+KWLRR D + A+ Q +LDA+W Sbjct: 300 ADARDLAAWYDGKPFDAILADVPCTASGVARRNPDVKWLRRPTDALKTARQQEALLDALW 359 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 LK GG ++ ATCSV EEN Q++ FL R ADAE E+ + LP + DGF Sbjct: 360 QTLKQGGRMLLATCSVFVEENDGQLQKFLNRHADAEPIES-------RVLLPNKHQ-DGF 411 Query: 422 FYAKLIK 428 +YA + K Sbjct: 412 YYALIQK 418 >UniRef50_B3QZ49 Sun protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QZ49_CHLT3 Length = 443 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 127/445 (28%), Positives = 208/445 (46%), Gaps = 28/445 (6%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A QA+ +V L + D+A ++ +G LR ++D +I + Sbjct: 4 AREIAVQALREVEVNHAKSDTALNHFFSITALEPVDRAFTMQIVYGTLREKMKIDHVIKQ 63 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 V ++ +G YQLL+ ++P AA+ E+VE A +K L L+NGVLR Sbjct: 64 FYRHDYDKMDIDVKNILRIGAYQLLFLSKVPRWAAVNESVELAKKLKGQFLGNLVNGVLR 123 Query: 124 QFQRQQEELLAEF------NASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWL 176 E + + +Y HP WLL+R Y + Q+I+EANN P + Sbjct: 124 NISNNLESVDFSIQGGTFADQIALKYSHPRWLLERWISTYGFLEAQNIMEANNLIPRIAF 183 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 RINR ++ + + L + PD V + + P G V+VQ + Sbjct: 184 RINRLKNAPEKFQQKLLAENVTFRKS-ILPDFVIPDRFFDLE--PFLSTGEVSVQSEAQA 240 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM 295 L PQ G+ +LD+CAAPGGK+T++ E+ Q+ ++D+ + +L + LG+ Sbjct: 241 LACRLLNPQPGQKVLDMCAAPGGKSTYLAEMMANAGQITSLDLYDNKLEDIDRLASALGI 300 Query: 296 KAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + D ++ E+ FD ILLDAPC+ TGV+ R +++W + D+ L+ LQ Sbjct: 301 DIISTIKHDAT---RFSHEEGFDAILLDAPCTGTGVLSRRAELRWRLSEADLAALSNLQY 357 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----------GTP 404 ++L+ K +VY+TCS+ PEEN + I+ FL + +L Sbjct: 358 QLLENAAKMAKPDAAIVYSTCSIEPEENQVLIEKFLNAHPEWQLQSAIEILPDEFHEVVH 417 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIKK 429 ++ LPG DG F A+L++K Sbjct: 418 DKGYISLLPGKNGFDGAFSARLVRK 442 >UniRef50_A4XL79 Sun protein n=2 Tax=Clostridia RepID=A4XL79_CALS8 Length = 433 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 121/440 (27%), Positives = 208/440 (47%), Gaps = 27/440 (6%) Query: 4 QRNLRSMAAQAVEQVV-EQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLDWL 61 + N R A + ++ + + ++ K+ +D+AL EL GVLR + LD+ Sbjct: 2 KINTRRAAFLVIFEIESRKNVNADALMEKYHHKLKKTEDRALFVELVHGVLRYKNILDYY 61 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLING 120 IN + + + + + ++ + Y+LL+ +IP +A + E E A + + Q K +N Sbjct: 62 INFVAKKGVK--DKKILNILRIATYELLFLDKIPDYATVNEACELAKNVNKNQ-KDFVNA 118 Query: 121 VLRQFQRQQEELLAEFNA---------SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +LR R+++E+ + +P +L+ L+K+Y ++ I+E N Sbjct: 119 ILRNIIRRKDEIEKALERVKEVNIKDFLSIKLSYPKFLIDYLEKSYGFDKTVKILEFLNT 178 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 +P ++IN S+ +L L+ G + + + + + + DG+ Sbjct: 179 KPLQSIKINTKKISQAEFLKKLEACGYE-YKVPELNREIVYIVKGNIKESELYRDGYFYY 237 Query: 231 QDASAQGCMTW--LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYD 288 QD ++ + W + ILDLCAAPGGKT + EV VV+ D+++ ++ R+ + Sbjct: 238 QDLASSFIVKWNRDDFEKASSILDLCAAPGGKTFNCAEVT-RGFVVSCDVNKSKIERLRE 296 Query: 289 NLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 NL RLG V + +FD ++ D PCS G IR+ PDIKW + DI Sbjct: 297 NLLRLGFDNVVVAENDALTLNEDFVGKFDIVIADLPCSGFGTIRKKPDIKWNKTKEDIEN 356 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG 408 L +LQ ++LD +LK GG + Y+TC++ EN + FL++ D L T Sbjct: 357 LHELQLKMLDNAAQYLKEGGIIFYSTCTLGHRENEDTVLKFLEKHKDFSLISQNT----- 411 Query: 409 KQNLPGAEEGDGFFYAKLIK 428 P + DGFF AKL K Sbjct: 412 --IFPDEYKCDGFFIAKLKK 429 >UniRef50_A8RCQ7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCQ7_9FIRM Length = 415 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 115/428 (26%), Positives = 196/428 (45%), Gaps = 21/428 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R+ A ++++ + +L Q V KDKAL+ ++ +G L+ + + Sbjct: 2 NARAYAFALLKEICIDEGYSNLLLRNKLQSVDPKDKALVTQIVYGTLQNYRLVRYQWQSY 61 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + + V L+ + +YQLLY ++P +A + E V P+ L+N VLRQ Sbjct: 62 VKKEPCK---EVALLLDMSVYQLLYMDKMPAYAVIDEAVRITKKNIHPRFSALVNAVLRQ 118 Query: 125 FQRQQEELLA--EFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRT 181 +R + L HP+WL+ + Y ++ + I ++ + +R+N Sbjct: 119 VERNGKRELEGNAIEQLALETSHPTWLVAMWKAQYGWQECEKICHSDLEIRKQCVRVNTM 178 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 S + LA + HA Y + ++ G V++QD ++Q + Sbjct: 179 KASVEELLASGEFVKGNLAEHALYYLG------NDIIHSNYYKQGLVSIQDEASQLVAQY 232 Query: 242 LAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 + PQ E ILD+C+APG K HI E + + +V DI R+ + + +RL +++ Sbjct: 233 VDPQPQERILDVCSAPGTKACHIAERMGDKGSIVCGDIHAHRVELIKNGARRLQLQSIQA 292 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 Q + + FDR+L D PCS GV+ R DIK+ + D+ L LQ +IL + Sbjct: 293 QVMDATSLKEIEGEMFDRVLCDVPCSGYGVLARKSDIKYHAKSTDMDTLIPLQQQILQSA 352 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 H+ G LVY+TC++ +EN Q+ AFL + + E + T P DG Sbjct: 353 SKHVVKDGILVYSTCTLNKKENEKQVAAFLAQHEEFECLQQQT-------IFPYTHHSDG 405 Query: 421 FFYAKLIK 428 F+ AKL + Sbjct: 406 FYIAKLKR 413 >UniRef50_C0EY63 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY63_9FIRM Length = 466 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 118/448 (26%), Positives = 203/448 (45%), Gaps = 21/448 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDK-DKALLQELCFGVLRTLSQ 57 M+K+ ++R+ A + + + + ++ + K D+A LC GV Sbjct: 16 MEKRTDMRAEALDTLIDIERNKKLSHIAIGETLMRNQFEKKADRAFYTRLCEGVTERKIY 75 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGL 117 LD++++ PM + + L+ +G YQ+L+ + AA +E V A +L G Sbjct: 76 LDYILDHYSKTPMKKCKPLIRSLLRMGAYQILFMDVRDAAACSEAVSLAKKRGFGRLSGF 135 Query: 118 INGVLRQFQRQQEELLAEFNASDAR-----YLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 +NGVLR R++E L D + Y P WL K + + Y E + I + + Sbjct: 136 VNGVLRTLVREKENLPVPDKKDDVKYVSIIYSVPEWLSKLIIEQYGKESAEKIFASFLEA 195 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P+ +R N + + + L+EAG+K P A + + + F G VQ Sbjct: 196 RPLTIRTNLSKTTPEELEKELEEAGVKVEKGNYLPYAFTISNLNYLGKIAAFRQGKFAVQ 255 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNL 290 D S+Q + G+ +LD+CAAPGGKT H + + +V++ D+ E + + +N Sbjct: 256 DESSQLAVAIADINEGDFVLDVCAAPGGKTFHAADRLKGAGKVLSRDLTEYKTELIEENK 315 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 R+ + Q + D +L D PCS G++ R DIK+ + + ELA Sbjct: 316 DRMHYENVEVQQWDALEEDESLLESVDVLLADLPCSGLGIMGRKNDIKYQMTEEQLGELA 375 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-------- 402 LQ +IL +W ++K GG ++++TC++ EN+ IK ++ L Sbjct: 376 ALQRQILSVVWKYVKPGGQMIFSTCTLNKGENAENIKW-IEENTPLHLVSIEEYLPQNLK 434 Query: 403 --TPEQPGKQNLPGAEEGDGFFYAKLIK 428 T Q Q +PG + DGFF +K + Sbjct: 435 NRTGSQGYLQLIPGEDTCDGFFISKFKR 462 >UniRef50_B0VHI6 Putative 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHI6_9BACT Length = 438 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 131/438 (29%), Positives = 209/438 (47%), Gaps = 16/438 (3%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKV--SDKDKALLQELCFGVLRTLSQLDWLIN 63 N RS A + +V++ + +L +K+ + +D AL L GV++ +LD+++ Sbjct: 2 NFRSEAYTTILKVLKDKEYSDTLLHQRAKKLKNAGEDPALFYNLVKGVIKLYLKLDYILQ 61 Query: 64 KLM-ARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + + + T + L+ +GLYQLLY IP +AA+ ETVE A + PQ+ +N V Sbjct: 62 QYVDKKKYTDTDIKIKVLLYMGLYQLLYLNSIPDYAAVNETVELAKTLFNPQVADFVNAV 121 Query: 122 LRQFQRQQEELLAEFNASDARY--LHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRI 178 LR + R E A Y P L+K+ + E+ + + N+ P + +R+ Sbjct: 122 LRNYLRNPEVSYPNEPALRIAYEHSFPPELIKQWLDLWGEENTEYLAMFFNENPELHIRV 181 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N T + + A + + P P A V F +G+ +VQD SA Sbjct: 182 NSTATTPEKLKAYFAKRNIVITPSQASPMMFHTAQTAEVLEDVAFSEGYFSVQDTSAALI 241 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 + L PQ E +LDL AAPGGK ++I E +V+AVD ++ + RL + Sbjct: 242 VELLDPQKEESVLDLFAAPGGKCSYIAERMDNTGEVIAVDKIPSKMKLLKQAANRLQLTN 301 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + F R+L+D PCS GV R D++W + ++IPEL +LQ + L Sbjct: 302 IKMVVTDAFKYGPVAPA-FHRVLVDVPCSGWGVFGRKSDLRW-QAHQNIPELIKLQEKAL 359 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG--TPEQP----GKQN 411 D + GG LVY+TC++ P+EN QI AFL++ + EL PE+ + Sbjct: 360 DYAANFVTPGGFLVYSTCTMNPKENEDQISAFLKKNRNFELIPADAFIPERYTSAGYLKT 419 Query: 412 LPGAEEGDGFFYAKLIKK 429 +P DG F AKL ++ Sbjct: 420 IPFKHNMDGAFAAKLQRR 437 >UniRef50_C4G2S0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S0_ABIDE Length = 455 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 115/454 (25%), Positives = 201/454 (44%), Gaps = 31/454 (6%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDW 60 N R + ++ G+ +L + + + L G + + LD+ Sbjct: 2 AVNEREIVLDMFLS-LKDGKPGHIVLKDTLDNYLYLDKASRGFITRLYEGSIEKMIYLDF 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 +IN P+ + + L+ +YQ+ + R+P AA+ E V+ A L G +N Sbjct: 61 VINSFSKTPVKKLKPIIKILMETAVYQIFFMDRVPDSAAINEAVKLAKKRGLAGLSGFVN 120 Query: 120 GVLRQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRP 172 GVLR R +E + + +Y P + + K Y Q + I+EA ++ Sbjct: 121 GVLRNIARNRENIALPDKDKEYIRYLEVKYSMPKEVTEHFIKEYGNVQAEEILEAFEKKQ 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P+ R+N T +R+ + L E +K +P+++++ ++ L FE+G +QD Sbjct: 181 PIVARVNGTRLTREELVKKLTEEDVKVSTDTVFPESLKILELDSLNFLESFENGDFVIQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 S+Q +LD+CAAPGGKT + E ++ A DI E++ + +N+ R Sbjct: 241 ESSQFIGKIAELPQNAKVLDICAAPGGKTLLMAEKPEAERITACDISEKKTGLIEENINR 300 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 +G+K + + E+ FD ++ D PCS GVI R DIK+ I ELA+L Sbjct: 301 MGIKKVITMVNDATVFNKKFEEDFDLVICDLPCSGLGVIGRKRDIKYNITGNKIKELAKL 360 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE------------ 400 Q EIL+ ++K GG L+++TC++ EN K F+ + + Sbjct: 361 QREILENAGKYVKKGGYLIFSTCTMSKLENEENFK-FISEFSGFSPVDFSDKIKDSVVRY 419 Query: 401 ------TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 E+ + LPG DGFF ++ ++ Sbjct: 420 KAGGRLISEAEKGYIRLLPGELGTDGFFISEFMR 453 >UniRef50_UPI00016C38F9 Fmu, rRNA SAM-dependent methyltransferase:Nop2p n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C38F9 Length = 465 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 135/469 (28%), Positives = 212/469 (45%), Gaps = 58/469 (12%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +AA + + + + ++ +S +D+ + +L FGV+R LD L+ Sbjct: 5 ARQVAADVLNRSRSRDGFAAELVDDAVNAANLSPQDRRFVTQLVFGVIRRGGTLDALLKP 64 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + P Q V L+ +G +QL + +P HAA+ ETVE A + P+ KG +NGVLR Sbjct: 65 FIHLPTHAVQDRVWDLLRLGAFQLTFLTHVPKHAAVHETVELAEHVGAPKAKGFVNGVLR 124 Query: 124 QFQ-------------------------------------RQQEELLAEFNASDARY--- 143 + R + +L + A Y Sbjct: 125 RIAELTTDEFTDAPGAAAVPFALVESAPTPSEGGGRGSYRRLTKPVLPDPATDPAPYFAA 184 Query: 144 --LHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGF 200 P WL R K Y ++ + N PP+W+R+N+ SR+S+ L ++ Sbjct: 185 AFSFPQWLANRWLKRYGVDECVRLGFWFNAAPPLWVRVNKLRASRESYRIQLAAQTIEVE 244 Query: 201 PHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGK 260 P ++P A+R + LPG+ +G VQD S+ + L Q G ILD CAAPGGK Sbjct: 245 P-GEHPQALRFSQHHSIRDLPGYAEGDFAVQDHSSMLVASALGVQPGMRILDACAAPGGK 303 Query: 261 TTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRI 319 TTH++E+ + A DID +RL V +R+ + ++ FD Sbjct: 304 TTHLMELMDGRGHITACDIDPKRLETVAALAQRMRLTGIETV--LLKDNEEFPAGPFDAA 361 Query: 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 L+D PCS TGVI R P+++W + + L +LQ+ +L +K GG +VY+TCS+ P Sbjct: 362 LVDVPCSNTGVIGRRPEVRWRLKPNEFEYLIRLQTRLLILAADRVKPGGAVVYSTCSIEP 421 Query: 380 EENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 +EN +KA L+ L E PG+ DG ++A+L K Sbjct: 422 DENEGVVKAVLRGMRGLTL-EAEHHSVPGRP-------SDGGYWARLRK 462 >UniRef50_B7J3C2 Sun protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J3C2_ACIF2 Length = 434 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 167/418 (39%), Positives = 240/418 (57%), Gaps = 9/418 (2%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 AA V + V+ GQ++ L P+ ++ D+A LQ L G LR + L KL+ +P Sbjct: 22 AAITVLRGVDSGQTVDAALLPVS--LTGTDRATLQWLVLGTLREFLSVQALSAKLLRKPW 79 Query: 71 TGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE 130 + + +L+ + L++L + + P A + + VE A+K+P +GL+N VLR++ R++E Sbjct: 80 REEDADLGFLLSLALFELRHGQRPAFAVVNDWVEMTEAVKKPWARGLMNAVLRRYLRERE 139 Query: 131 ELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 L D HP+WL RL+ AYP+ W +I ANN PP+WLR+N ++ Sbjct: 140 VLDTALVDRDL--GHPAWLAARLRAAYPQDWPAIAAANNSAPPLWLRVNTQRVDPGAYRR 197 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 LL E G + A+ L PV LPG++ GWV VQD +AQ LAP+ GE I Sbjct: 198 LLAEQGREAEGVTWSAAALCLPASVPVATLPGWDAGWVAVQDGAAQLAAHILAPREGERI 257 Query: 251 LDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 LD CAAPGGKT H+ + ++ A+D +RL+RV + L+R G + ++ D + W Sbjct: 258 LDACAAPGGKTAHLWALGAT-RLDALDRSAERLNRVRETLERQGGEVHLQAADAAETATW 316 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 + +D ILLDAPC+ TGVIRRHPDI+ R+ D+ E Q+ +L+ +WP L+ GG L Sbjct: 317 WNGETYDAILLDAPCTGTGVIRRHPDIRLRRQPEDVAEAVAQQARLLEGLWPCLRPGGRL 376 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 +YATCSVLPEEN QI AF+QR +DA Q LPG E+ DGF+YA L K Sbjct: 377 LYATCSVLPEENEEQIAAFVQRHSDARRMAHPLTG----QRLPGQEDMDGFYYALLEK 430 >UniRef50_Q03W17 tRNA and rRNA cytosine-C5-methylase n=11 Tax=Lactobacillales RepID=Q03W17_LEUMM Length = 448 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 118/445 (26%), Positives = 206/445 (46%), Gaps = 24/445 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWL 61 N R +A Q + ++ + G + L + Q K+ + D LL L +GV++ ++ Sbjct: 8 SDNPRVLAVQTLAKI-KNGAYSNLQLNQVIKQHKLGEADTRLLTTLVYGVIQHRLTFEYW 66 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLING 120 + + V L+ ++Q+ Y +IP HA E++E A + + Sbjct: 67 LEPFVGS--KKIDPWVRELLYTAIFQMEYLDKIPQHAIFNESIEVAKILGHVGTGKFVTA 124 Query: 121 VLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMW 175 +L R+ ++ + P WL++ L K ++ + I+ N P Sbjct: 125 ILHNISRKGLRSVADIGDDIQRLSIEASLPVWLVEELIKQNGDERARQIIATINDAPKQS 184 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R+N + + L+ + A + V + + DGW+T+QD SA Sbjct: 185 IRVNTLLATDQEVVTALESENFTITASSVAAHAFLVSGGH-VASSKAYHDGWLTLQDESA 243 Query: 236 QGCMTWLAPQNG-EHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRL 293 + L + ILD AAPGGKTT + + AP+A + A+D+ E ++ + +N +RL Sbjct: 244 MLPVESLHLTPEVKSILDAAAAPGGKTTQLAQYSAPDAVITALDVHEHKIKLINNNAERL 303 Query: 294 GM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 + K + D R + ++ FDRIL+DAPCS G++RR P+I++ + D+ LA+ Sbjct: 304 HVADKIHARVLDARKVPEQIDKK-FDRILVDAPCSGFGLLRRKPEIRYDKTLEDVESLAR 362 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------- 404 LQ++ILD++ +L G +VY+TC++L +EN + FL+ + EL T T Sbjct: 363 LQTQILDSVSQNLAKNGIMVYSTCTILRQENDDVVTNFLEDHPNFELIPTETTYKLKLDH 422 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIKK 429 + P DGFF A L K Sbjct: 423 GEKALHVYPDDYHTDGFFVATLRKN 447 >UniRef50_D0KVS1 Sun protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVS1_HALNC Length = 437 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 168/439 (38%), Positives = 231/439 (52%), Gaps = 15/439 (3%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 + + ++ AQ + VV QG SL L + + + L+Q + + VLR L + Sbjct: 2 PRLSPEALTAQLLLSVVGQGVSLDAALGRVLSQAQPVHRGLVQAMGYEVLRHYEALVFWR 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + L+ RP+ K + L++VGL ++ R ++ V+ A + P GL+N VL Sbjct: 62 DSLLERPIPAKSAIIALLLLVGLERIRGARREASRSVNSAVQAARELGHPWATGLLNAVL 121 Query: 123 RQFQRQQEELLAEFN--ASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRIN 179 R+ RQ EE + F S A P WL L + E + ++ A PPM LR+ Sbjct: 122 RRAVRQIEEGVDPFAQAPSAAGARLPQWLFDALTVDWGEARASALGSALATHPPMTLRV- 180 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 R ++ L ++ P A + L P V LPGF +G V+VQD +AQ + Sbjct: 181 --AGDRAAYGEQLSSIEIEANPTAFSTRGLNLVHPMDVDRLPGFAEGQVSVQDEAAQWVV 238 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L G+H+LD C+APGGKT +L+ PE+ V AVDID R++RV +NL+R + A + Sbjct: 239 DLLDLAPGQHVLDACSAPGGKTLAMLQHQPESNVTAVDIDTTRMARVQENLERGQVFARL 298 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 GD P W Q FDRIL D PCSATGVIRRHPDIK LRR D+P L + Q+ ILDA Sbjct: 299 IVGDAGAPQDWWDGQPFDRILADVPCSATGVIRRHPDIKRLRRPEDLPVLVERQAVILDA 358 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP---------GKQ 410 +W LK GG +VYATCS+L ENS Q+ AFL+R DA G+Q Sbjct: 359 LWSLLKPGGRMVYATCSILDRENSAQVAAFLRRHGDARALPLSVDWGEPRQIDGQFLGQQ 418 Query: 411 NLPGAEEGDGFFYAKLIKK 429 P +E DGFFYA L K Sbjct: 419 VFPVSEGHDGFFYAVLEKN 437 >UniRef50_A8ST69 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8ST69_9FIRM Length = 452 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 116/442 (26%), Positives = 205/442 (46%), Gaps = 21/442 (4%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWL 61 +N R + + + + + L + +S +D+A + + GV +LD++ Sbjct: 3 KNTREVVLSILLDIEKNHTFSNTALGTALRANQFMSKQDRAYITRMVEGVTEKRMRLDYI 62 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLING 120 +N+ + + + ++ +G Y++ Y + H A V+ A L+G +NG Sbjct: 63 VNQFSKTKINKCKPLIRCVLRMGTYEIFYMDSVQDHTACNLCVKLAADHGFGSLRGFVNG 122 Query: 121 VLRQFQRQQEELLAEFNASDAR------YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 VLR R ++ ++ D R Y P LL+ L++ Y E I+ + + P Sbjct: 123 VLRNIARNKDSIVFPDQEKDKRAYYSVMYSVPEELLEILERDYDYETIDRILASGDSDRP 182 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 +R+N S ++ L + G+ + ++ + + +PGF DG VQD Sbjct: 183 TAIRVNTEKISVTAFSEKLRQNGITVERGSMNDTSLLISGYDYIRKVPGFFDGEFVVQDQ 242 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKR 292 S+ + G+ ++D+CAAPGGKT + + E V++ D+ +++ + +N++R Sbjct: 243 SSCLAVKAAGINEGDLVVDVCAAPGGKTMYAAMLTGSEGHVISRDLTDKKTELIEENIER 302 Query: 293 LGMKATVKQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+ Q D R + + D ++ D PCS G++ R DIK+ + ELAQ Sbjct: 303 LGLSNVTVQVHDAREFDEEL-TGKADVVIADLPCSGLGIMGRKNDIKYHVSMESVKELAQ 361 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC--ETGTPEQPGK 409 LQ EILD + ++K GGTLVY+TC++ EN F D LC + PE G+ Sbjct: 362 LQREILDTVCRYVKPGGTLVYSTCTIDSIENDENAVWFADTH-DFSLCGIDDVVPEHGGE 420 Query: 410 QNLP----GAEEGDGFFYAKLI 427 + G +E DGFF +K Sbjct: 421 RGFVTLHQGIDECDGFFISKFR 442 >UniRef50_Q1Q7P9 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7P9_9BACT Length = 462 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 137/467 (29%), Positives = 222/467 (47%), Gaps = 53/467 (11%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 ++R + + + +V E+ ++ Q VS +DK LL EL G+ R LD +++ Sbjct: 2 DVRLESIRILRKVDEKDVLAQELVEERCQQTNVSRRDKHLLLELVNGITRHRLSLDTILS 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAI-KRPQLKGLINGV 121 P + + Y + +G+YQ+++ +IP AA+ +VE + +RP N + Sbjct: 62 FFSKIPPQKIEPWLLYALRLGIYQMIFLDKIPHSAAVNTSVELVKNLIRRPDAARFANAI 121 Query: 122 LRQFQR--------------------QQEELLAEFNAS-------------DARYLHPSW 148 LR R ++E + EF+ Y HP W Sbjct: 122 LRAVDRTIKNKYSVNHKNVNQQKLLYKKENVWCEFSEPIFPDPGENLTSYIAKNYSHPEW 181 Query: 149 LLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD 207 L+KR Y ++ I +ANN P + LRIN S + + +LL++ G+ + + Sbjct: 182 LIKRWLTRYGIDKTIEICKANNHIPTLSLRINHNKTSINEFASLLEQNGILARVIDN--N 239 Query: 208 AVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL---APQNGE-HILDLCAAPGGKTTH 263 A+ + V +PGF +G +VQD ++ T+L P G +LD+CAAPGGKTTH Sbjct: 240 ALIINKSV-VSDIPGFSNGLFSVQDITSMKVGTFLIAETPTAGAITLLDMCAAPGGKTTH 298 Query: 264 ILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD 322 I E+ + + A+DI +RL RV +N +RLG+K + +FDR+L D Sbjct: 299 IAEIIQNKGSIYALDISLKRLHRVKENCQRLGIKNITIICCDASEGKIPFRGKFDRVLAD 358 Query: 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 PCS TGV+ R + +W +++I +LA LQ +L LK G LVY+TCS+ PEEN Sbjct: 359 VPCSNTGVLSRRVEARWRITEKNIKQLAALQYSLLKTGSTMLKQDGILVYSTCSIEPEEN 418 Query: 383 SLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 ++ FL+ L + P +GDG + A++ K+ Sbjct: 419 QEVVQKFLKNEPQFYLDKEDC-------YSPEINKGDGGYMARIRKR 458 >UniRef50_A8G3E0 Sun protein (Fmu protein) n=7 Tax=Prochlorococcus marinus RepID=A8G3E0_PROM2 Length = 438 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 143/433 (33%), Positives = 227/433 (52%), Gaps = 24/433 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R A + + +V G + L + + + + D A + EL FG +R LD + Sbjct: 8 RKAAWEILLKV-SSGDFSDHALEKVLKNYQFNSLDIAFITELSFGCIRYRKFLDLWTDHT 66 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + + +L+ +GLYQLL +IP AA++ TVE A L G +N +LR Sbjct: 67 SKITHKKQPPKLRWLLHIGLYQLLKMDKIPFPAAISTTVEVAKKTDLNGLAGTVNAILRN 126 Query: 125 FQRQQEELLAEFNASDARY------LHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLR 177 R+ E+ + +SD + P WL+K L K + ++I++A N++P + LR Sbjct: 127 ASRKLEQKIFPELSSDKKERISYLESFPLWLVKDLYKWVGNSEGENIIKAFNKKPSIDLR 186 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQ 236 IN+ + D +L +L E + D + + L++ P + LPG+ DG T+QD S+Q Sbjct: 187 INQLKTNLDKFLIVLYENKIDAEIIKDLHNGITLKSNPRSIKNLPGYSDGLWTIQDRSSQ 246 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM 295 L P+ GE ILD CAAPG K+TH+ E+ + A+++AVD E+RL + NL RL + Sbjct: 247 WIAPLLNPKEGEKILDACAAPGSKSTHLAELTNDSAEILAVDRSEKRLKILQSNLVRLNL 306 Query: 296 KAT-VKQGDGRYPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 K+ + D + + FD+ILLDAPCS G + R+PD +W I L L Sbjct: 307 KSVNTLKADATSLIELNPKFISYFDKILLDAPCSGIGTLSRNPDSRWSLSKEKIKSLTLL 366 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412 Q ++L+ I+P LK G +VY+TC++ P+EN+L I+ F+++ +L KQ L Sbjct: 367 QEKLLEKIFPLLKKDGIMVYSTCTICPDENNLLIEKFIEKNKGLKLVSQ-------KQIL 419 Query: 413 PGAEE-GDGFFYA 424 P + GDGF+ A Sbjct: 420 PRLDYPGDGFYSA 432 >UniRef50_D1PM68 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM68_9FIRM Length = 437 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 112/437 (25%), Positives = 195/437 (44%), Gaps = 20/437 (4%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQK----VSDKDKALLQELCFGVLRTLSQLDWLI 62 R +A +A+ + G + +L +K + +D A + + VL LD+L+ Sbjct: 3 PRRLAVKALLHQEQAG-YANLVLDAELKKCTPPLEGRDAAFAARIFYTVLEYQPLLDFLL 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 ++ +P+ V ++ GL Q + +P AA+ E+V+ A+ + G++N VL Sbjct: 62 DRFSKKPVARLDAPVRAILRAGLAQARFMEVPLPAAVNESVKLTKAMGKTSAAGMVNAVL 121 Query: 123 RQFQ---RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRIN 179 R+ ++++ + L + Y E+ + A RP +R+N Sbjct: 122 RRAAVYPVKEKDFADPLERLQIYDCLSRPVAALLYQEYGEETFDLAAAFRNRPVSAVRVN 181 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 + ++ + L G P +P A+ +E A F +G VQ ++Q Sbjct: 182 TLRTTDEALIQALQAEGHTVRPGP-WPHALLVEFQGSPAAGNSFAEGHYHVQGLASQFAA 240 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-A 297 LA + G+ +LDLCAAPGGK+ + E+ ++++ ++ R+S + +R G++ A Sbjct: 241 LSLAVRPGQKVLDLCAAPGGKSLTLAEEMQNTGELISGEVLPGRVSLIQKAFERCGIRCA 300 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 Q D P + G FDR+L D PCS GVI + PDI++ + + L +Q +IL Sbjct: 301 RAVQNDATVPRKEWG--TFDRVLCDVPCSGLGVIAKKPDIRY-KDLDGMENLCAIQQKIL 357 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------EQPGKQN 411 L G LVY+TC++ +EN Q++ FL + + G Sbjct: 358 QNGADSLAENGRLVYSTCTINVQENQKQVENFLCDHPEFRVVAPELTLPGMEQGPFGTLF 417 Query: 412 LPGAEEGDGFFYAKLIK 428 LP DGFF A L K Sbjct: 418 LPHKTGTDGFFVAILEK 434 >UniRef50_B9K874 Sun protein n=6 Tax=Thermotogaceae RepID=B9K874_THENN Length = 431 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 129/441 (29%), Positives = 223/441 (50%), Gaps = 29/441 (6%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNI-LPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 + N+R +A + + + E+ + L + + ++D+D+ L+EL +GV+R LDW I Sbjct: 2 RTNVRLLAYRLLRK-YEKEKFLDREDVDSVLSVLNDRDRRFLKELVWGVMRKEELLDWYI 60 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGV 121 N+L+ P V + +G+YQLL+ +P +AA++ETV+ K L+N V Sbjct: 61 NQLLRNP--DIPPAVRVALRMGVYQLLFMDGVPDYAAVSETVKLVK---NENFKKLVNAV 115 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINR 180 LR+ + + + Y HP WL+ + PE+ I+E + P LR+N Sbjct: 116 LRRV-----KSVPPPSDLHLVYSHPKWLVDYWRSFLPEEVVLRIMEWYQKPLPTVLRVNS 170 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCM 239 +R+ + +L + G + P +V ++ P++ +G TVQ S+Q Sbjct: 171 LVTTREEVIEILSKEGTEAIYGKHSPFSVVIKKLGVPLNDSKVITEGLATVQGESSQIVP 230 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 + + +LD C+APGGKTT I E+ + +++A D+ +RL V +++RL + + Sbjct: 231 LLMDLEPNMKVLDTCSAPGGKTTFIAELMKDKGEILATDVSMERLQLVEKHVRRLKLSSV 290 Query: 299 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 +K D +++ ++ FDRIL+DAPCS+ G R HP++ + + EL++ Q IL Sbjct: 291 KIKLADAERLTEFIQDE-FDRILVDAPCSSLGTARNHPEVLRRAKKEEFKELSEKQFRIL 349 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----------GTPEQP 407 W LK GG L+Y+TC++ EEN+ IKAF ++T D E+ + G + Sbjct: 350 SQSWKLLKKGGILLYSTCTITKEENTEVIKAFAEQTPDVEVIDLRKRLEDYGVEGLWDGF 409 Query: 408 GKQNLPGAEEGDGFFYAKLIK 428 G LP F+ + L K Sbjct: 410 GFLMLPDETLTP-FYVSALKK 429 >UniRef50_D2UG22 Putative trna and rrna cytosine-c5-methylase protein n=1 Tax=Xanthomonas albilineans RepID=D2UG22_XANAL Length = 437 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 167/417 (40%), Positives = 239/417 (57%), Gaps = 13/417 (3%) Query: 19 VEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV 77 +++G+SL L + +D+AL++ +CF VLR + + + + + + + Sbjct: 25 IDRGRSLKAELAAALPGLPDARDRALVEAICFAVLRRRPAYEAALRLWLQKQLPQRDAEL 84 Query: 78 HYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFN 137 L++ G QL + PHAAL+ TVE A++RP+ GL+N +LR+ R Sbjct: 85 RALLLAGFAQLDVLGLAPHAALSATVEATRALERPRQAGLVNALLRRALRDG------LP 138 Query: 138 ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGM 197 A P WL + +PEQ ++I A+ Q P+WLR+NR +R ++L L +AG+ Sbjct: 139 EVPADAGWPLWLRDAVCADWPEQAEAIFAASQQPAPLWLRVNRQRGTRATYLQALADAGI 198 Query: 198 KGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAP 257 + DAV L P V ALPGF +GWV+VQDASAQ LAP G +LD CAAP Sbjct: 199 AAQAASALADAVCLHVPMAVSALPGFAEGWVSVQDASAQQVADVLAPAPGARVLDACAAP 258 Query: 258 GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--GMKATVKQGDGRYPSQWCGEQQ 315 GGK+ H+LE P + A+D+D +RL RV + +R+ G +A ++ D P W Sbjct: 259 GGKSAHLLERDPTLCLTALDVDARRLQRVRETFERIGSGTQARLQVADAAQPQTWWDGVP 318 Query: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 FD +LLDAPCSATG++RR PD+ RR D+ L LQ+ +LDA W L+ GG LVYATC Sbjct: 319 FDAVLLDAPCSATGIVRRQPDVLLHRRGEDLIALQALQARLLDAGWQVLRPGGVLVYATC 378 Query: 376 SVLPEENSLQIKAFLQRTADAELCE----TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 S+L +EN+ Q++A L R ADA L + G P G+Q LPG + DGFFYA+L K Sbjct: 379 SLLQDENARQLQALLARHADAALEDPGAACGHPSGGGRQRLPGEQHADGFFYARLRK 435 >UniRef50_UPI0001BC65B2 16S rRNA m(5)C 967 methyltransferase n=2 Tax=Fusobacterium RepID=UPI0001BC65B2 Length = 440 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 121/431 (28%), Positives = 213/431 (49%), Gaps = 23/431 (5%) Query: 14 AVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 A+ Q V+QG+ + L L + +K + E+ +GV+R LD++I++ + Sbjct: 9 ALLQEVDQGKYSNIALNELFHRKVFKKGEKNFITEVFYGVIRNKIYLDYMISQ---KVKE 65 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR---Q 128 K+ + L + YQ+ + + + E VE A + +NGVLR FQR + Sbjct: 66 VKKDWLQQLFRLSFYQIRFMKSDDKGVIWEGVELAKKKYGVSVSRFVNGVLRNFQRSFIE 125 Query: 129 QEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSW 188 +EE L + + +P W ++++K PE++ I+++ + P + +R+N +S + + Sbjct: 126 EEENLKREGREEVLFSYPKWFFEQIKKESPERYIEILKSLKRTPLLSVRVNLLKYSCEEF 185 Query: 189 LALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGE 248 L + ++ + + + F++G + VQDA++ L + GE Sbjct: 186 EEYLRKEEIEIIKKV---ETIYYTKAGNLLNSSEFQEGKIIVQDAASYLAAKNLGAKPGE 242 Query: 249 HILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATV-KQGDGRY 306 +LD C+APGGKT+ + E E Q++++DI ++ + +N K+LG+ + D R+ Sbjct: 243 IVLDTCSAPGGKTSVLAEAMKNEGQILSLDIHTHKIKLIQENCKKLGITIVQAVKLDARH 302 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 S ++FDRIL+DAPCS GV+ + P+ + +++ +I EL LQ EIL A LK Sbjct: 303 LS--LQGKKFDRILVDAPCSGYGVLAKKPEGLYNKKEENIKELVTLQREILMAAAEVLKV 360 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ--------PGKQNLPGAEEG 418 GG +VY+TC++LP EN K FL+ + E + PE G E Sbjct: 361 GGEMVYSTCTILPAENQENAKWFLETHPNFESIQLQIPENVAGTYDDCGGFSIDYQEEVV 420 Query: 419 DGFFYAKLIKK 429 D F+ K K Sbjct: 421 DSFYMIKWRKN 431 >UniRef50_B9QVY4 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Alphaproteobacteria RepID=B9QVY4_9RHOB Length = 468 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 148/452 (32%), Positives = 228/452 (50%), Gaps = 43/452 (9%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ-----QKVSDKDKALLQELCFGVLRTLS 56 K R +AA + VV + + L L + ++ D+AL++ + LR Sbjct: 32 KPGFAARKVAADILGNVVHKKRPLDGELDMASGHSGFRALAANDRALVRAIAGAALRHRG 91 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LK 115 ++ ++ +L+ R + K V ++ V + Q+ + IP AA++ V+ A +R + K Sbjct: 92 EITEILGRLLDRDIPEKTGRVLDILHVAIAQMQFLDIPDRAAVSLAVDHASMDRRARPYK 151 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPM 174 GL+NGVLR+ R+++E+ ++ +A R P WL + Q AY E+ ++I +A+ + + Sbjct: 152 GLVNGVLRRLGRERDEITSDLDAP--RLNTPDWLWESWQAAYGEEGARAIAKAHEREAAL 209 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 L + +W LD + +VRL V AL GFEDG VQDA+ Sbjct: 210 DLTV---KADAAAWAEKLDGVVVGA-------GSVRLTKKGAVDALEGFEDGAWWVQDAA 259 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 A L +G+ + DLCAAPGGKT + V A++ A+DI + RL R+ +N+ RLG Sbjct: 260 ASLPAKLLGDVSGKQVADLCAAPGGKTAQLAAVG--AEITAIDISKARLKRLAENMTRLG 317 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + T D R ++ E FD ILLDAPCSATG IRRHPD+ W+++ DI +L+++Q+ Sbjct: 318 LSVTTVAADLR---EFEPEVLFDAILLDAPCSATGTIRRHPDVPWIKKPYDIEKLSEIQT 374 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AELCETGTPEQPG----- 408 +LD + LK GG LVY TCS+ E Q +AFL+R D L E G Sbjct: 375 ALLDRVMSWLKPGGVLVYCTCSLERAEGEGQAEAFLERNKDRVSLVPVDASEIGGLAESV 434 Query: 409 -----KQNLP--------GAEEGDGFFYAKLI 427 + P G DGFF A+ Sbjct: 435 TPEGYLRCRPDQSAGPETGLFGMDGFFAARFR 466 >UniRef50_B4CZF1 Sun protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZF1_9BACT Length = 410 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 137/430 (31%), Positives = 212/430 (49%), Gaps = 30/430 (6%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R A+ + + IL +K + D+A E FGVLR LS+LD+LI Sbjct: 2 NPRQSCVLALLEWEKGKYFSDEILHTSLEKNPMQPLDRAFFMETFFGVLRNLSRLDFLIG 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 +L + ++ +GLYQ+ + R PHAA+ E+V + +GL+N +LR Sbjct: 62 QLREGRI---DPQTRAVLRLGLYQIFHMRTAPHAAVNESVAL-----GGRARGLVNAILR 113 Query: 124 QFQRQQEELLAEFNASD--ARYLHPSWLLKRLQKAYPEQWQSI-VEANNQRPPMWLRINR 180 + R++E L ++ A+ R HP +L+ R ++ + + I E NN+ + +R N Sbjct: 114 RALREKEALESDLLAASSAVRTSHPEFLIARWEEVFGPEATRILCEWNNEPADVHVRANG 173 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + L + P +P A+++E P G VQD S Sbjct: 174 LRVTVGELL----RSSTSAMPSPVHPLAIKVEHIPP----SWIAMGLCYVQDPSTLLSCD 225 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK-AT 298 LAPQ GE +LD CAAPGGKTT++ ++ + +++A D+ + R++R+ +NLKRLG+ A Sbjct: 226 LLAPQPGETVLDACAAPGGKTTYLAQLMHDQGRIIACDLYDSRVARLRENLKRLGVTIAR 285 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + D FDRIL+DAPCS TGVIRR D++W + D + Q +L Sbjct: 286 AIRHDCMQAGPPLDPDSFDRILVDAPCSNTGVIRRRVDVRWRLTEEDFIRMPAQQLALLR 345 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEG 418 LK GGTLVY+TCS+ PEEN L ++ E+ ++ LP + Sbjct: 346 RTATLLKPGGTLVYSTCSLEPEENDLLVEKVCAAIPSLRFVES-------RRALPFVDRI 398 Query: 419 DGFFYAKLIK 428 DG F AK ++ Sbjct: 399 DGAFAAKFVR 408 >UniRef50_C5WIG1 16S rRNA m(5)C 967 methyltransferase n=44 Tax=Streptococcaceae RepID=C5WIG1_STRDG Length = 452 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 122/441 (27%), Positives = 210/441 (47%), Gaps = 24/441 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWL 61 + ++R A +E + +QG + L +S KD+ALL E+ +G + L+W Sbjct: 18 KISIRGKALLTLEHIFDQGAYTNIALNQQLSNKALSTKDRALLTEIVYGTVSRKISLEWY 77 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIK-RPQLKGLIN 119 + + + + V+YL+M+ LYQL+Y ++P HA + + V A + + +N Sbjct: 78 LAHYV-KDRDKLDKWVYYLLMLSLYQLIYLDKLPAHAIVNDAVGIAKNRGNKKGAEKFVN 136 Query: 120 GVLRQFQRQQEELLAEFNAS----DARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 +LRQF + +Y P WL+K+L+ + ++ +I+E+ R Sbjct: 137 AILRQFTSHPLPDMGTIKRRNKYYSVKYSLPVWLVKKLEDQFGSDRSVAIMESLFVRSKA 196 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 +R+ + + + + A F +G +T+QD S Sbjct: 197 SIRV----TDPLKLEKI--AEDLDAERSLLSATGLT-KASGHFAASDYFTNGDITIQDES 249 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 +Q L E ILD C+APGGKT+HI +V+A+D+ + +L V +N RLG Sbjct: 250 SQLVAPTLNIDGDEIILDACSAPGGKTSHIASYLKTGKVIALDLYDHKLELVKENANRLG 309 Query: 295 M--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + ++ D R + + FD+IL+DAPCS G+IRR PDIK+ + +D L + Sbjct: 310 VADNIETRKLDAREVHRHFEKDSFDKILVDAPCSGIGLIRRKPDIKYNKESQDFNALQAI 369 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE----QPG 408 Q EIL ++ L+ GG + Y+TC++ EEN I+AFLQ + E + + + G Sbjct: 370 QLEILSSVCQTLRKGGIITYSTCTIFDEENRQVIEAFLQSHPNFEQVKLNHTQADIVKDG 429 Query: 409 KQNL-PGAEEGDGFFYAKLIK 428 + P + DGFF ++ + Sbjct: 430 YLIITPEQYQTDGFFIGQVRR 450 >UniRef50_B1C5S4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S4_9FIRM Length = 450 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 119/446 (26%), Positives = 207/446 (46%), Gaps = 22/446 (4%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVS-DKDKALLQELCFGVLRTLSQLDWL 61 K R A + + +V+ G + L + + D+ L + GV++ +++L+++ Sbjct: 6 KISPSRVSAYKVLSEVLMTGAYSNIALTKHLASIKIEADRRLCTNIVHGVIKKINKLEYV 65 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLING 120 ++ L P+ V + +GLYQ++Y +IP +A + ++V + G +NG Sbjct: 66 LSTLSNTPVNELDERVKISLYIGLYQIIYLNKIPEYAIVNDSVNLVKMFVGKKASGFVNG 125 Query: 121 VLRQFQRQQEELLAEFNASD------ARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 +LR R++ EL E SD Y L ++L +Y E+ + + P Sbjct: 126 ILRNALRKKHEL-KEIEFSDFFDIMYYEYGFKRALSEKLLLSYSKEELIEYAKYSILPPN 184 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 + LR+N+ +R+ E G + P+ + + + V L ++ G ++QD Sbjct: 185 VTLRVNKLKTNREELKNRFKEKGFEVR-DTFVPEGIEVLSHLNVTLLEEYKKGLFSIQDC 243 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKR 292 + L + +LD+CAAPGGK+ H E+ +V+ DI ++L + +K+ Sbjct: 244 AGMVVAHSLDVKEDMKVLDMCAAPGGKSMHTSELMNNSGDIVSCDIYTKKLEIMNFRMKQ 303 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 LG+ + + C FDRI+ D PCS GVIRR P+I + I EL ++ Sbjct: 304 LGINNIMTKKLDGTIFNECYMNTFDRIICDVPCSGLGVIRRKPEILIYYSNEKIEELKKV 363 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP----- 407 Q +IL+ +LK GG L+Y+TC++ EEN + + L+ D +L E P + Sbjct: 364 QRQILENGIRYLKKGGVLIYSTCTINKEENEDIVYSILKEHEDIKLNEINLPFEFDYDKA 423 Query: 408 ----GKQNLPG-AEEGDGFFYAKLIK 428 G N+ G D FF AKL K Sbjct: 424 KAKEGILNISGDKNNIDSFFIAKLTK 449 >UniRef50_B0PFT6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFT6_9FIRM Length = 450 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 132/439 (30%), Positives = 207/439 (47%), Gaps = 23/439 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQL 58 MKK + R AAQA+ ++ G + + L +K + ++ A L + VL + Sbjct: 25 MKK--DARYTAAQALLRMESAGAYSNLTIDSLIEKNGLDAREGAFAAALFYTVLERRLTI 82 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGL 117 D ++ AR + + V + +G+ QL++ + +AA++E+V A+ + G Sbjct: 83 DHVLAAYCARGLASLSKPVLQTLRLGVCQLVWMDGVDDYAAVSESVNLTRALGCAKASGF 142 Query: 118 INGVLRQFQRQQEELLA----EFNASDARYLHPSWLLKRLQKAYPEQWQ-SIVEANNQRP 172 +NGVLR F R + +L Y P WL++ AY E ++ A+ RP Sbjct: 143 VNGVLRAFLRADKAVLPVKGGTAERLSVEYSCPVWLVEAWLSAYGEAAALRVLRASLGRP 202 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P++LR N S L G+ + +L F +G VQD Sbjct: 203 PIYLRANTLRVSAQQLCERLAAEGVAAQLAEPPAGCLLARGRVEPESLASFGEGLFHVQD 262 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLK 291 ++Q C L GE +LD+CAAPGGK+ I E + ++VA D+ ++R V K Sbjct: 263 RASQLCAAALGALPGERVLDVCAAPGGKSFTIAEHMENSGELVARDLHQKRARMVQCGAK 322 Query: 292 RLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ GD G FDR+L D PCS GVIRR P+IK+ + + + L Sbjct: 323 RLGLSIIHASAGDAAVYDASLG--SFDRVLCDVPCSGFGVIRRKPEIKY-KPQKSVEGLP 379 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQ 410 ++Q +IL +LK+GGTLVY+TC++LP EN ++ L ET +Q Sbjct: 380 EIQYKILKTSTHYLKSGGTLVYSTCTLLPAENERVVQRLLD--------ETNGAFNIVEQ 431 Query: 411 NLPGAEEGDGFFYAKLIKK 429 + E+ DGFF + L K+ Sbjct: 432 RVYTGEDTDGFFVSVLKKR 450 >UniRef50_Q6AS22 Related to SUN protein (FMU protein) n=1 Tax=Desulfotalea psychrophila RepID=Q6AS22_DESPS Length = 454 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 155/450 (34%), Positives = 229/450 (50%), Gaps = 24/450 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWL 61 + + R +AA+ + QV ++ Q + IL L Q++++ ++++L + FGVLR LD L Sbjct: 2 KTSSRYIAAETLCQVYKKQQPVKPILEKLCQQKQLNPRERSLAMNMVFGVLRKRQYLDIL 61 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIK-RPQLKGLIN 119 + KL + VH + VGLYQL + IP A + E V K +L G +N Sbjct: 62 LRKLSTVRLKKLDPFVHQALTVGLYQLFFLDSIPESAIVNEAVNSCKTAKVHKRLHGFVN 121 Query: 120 GVLRQFQRQQEELLAEFNASDAR-YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 G+LR RQ+E L + + PS L KR Q+ + E+ + I E N + PP+ LR Sbjct: 122 GILRNATRQKEALANGMKEQEQEIHTTPSGLFKRWQERFGLEKARYICEINGEEPPLTLR 181 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 +N T S D + ALL G+ G + + + +PG++DG VQD++AQ Sbjct: 182 VNSTKTSIDDFEALLTREGITGTRGPAPESLIIEDYQGLIGDIPGYKDGLFQVQDSAAQL 241 Query: 238 CMTWLAP-QNGEHILDLCAAPGGKTTHILEVA--PEAQVVAVDIDEQRLSRVYDNLKRLG 294 L P ++G H LD CA GGKT+HI+++ E +V+AV+ D +R + N++RL Sbjct: 242 ASLLLLPIKSGGHYLDACAGLGGKTSHIIQLGADKEIKVIAVEPDAKRKEKFITNIERLF 301 Query: 295 MKATVKQGD-GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 V+ + Q FD IL+DAPCS TGVIRR PDI+W R++ D + +Q Sbjct: 302 THHEVELHPTSLQEFKASNTQAFDGILVDAPCSGTGVIRRQPDIRWNRKEEDFLQKQIIQ 361 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG--TPEQPGKQN 411 EIL L G LVYATCS+ EEN IK FL D L + PE+ G+ Sbjct: 362 LEILSLAAEMLAPTGILVYATCSLEIEENEDLIKKFLLLFPDFYLTDCQNYLPEEVGEHI 421 Query: 412 LPGAEE------------GDGFFYAKLIKK 429 P + DGFF A+L ++ Sbjct: 422 RPAKDGDGSFFAPLPSKRLDGFFAARLARR 451 >UniRef50_B9Y7F7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7F7_9FIRM Length = 412 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 123/432 (28%), Positives = 197/432 (45%), Gaps = 29/432 (6%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R A Q + ++ +GQ + L Q +S+++K + + +GVLR L W Sbjct: 2 NTTRKRAWQGLNAILNEGQYANLWLRQHGQTLSEEEKRWVTAVIYGVLRHREPLRWQWRD 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRI-PPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+ + +V L+ + +YQL Y +A + + VE K KGL+N VLR Sbjct: 62 LVR---NVPEPSVAVLLDMSVYQLFYLDKGAEYAIVNDAVELCPRSK----KGLVNAVLR 114 Query: 124 QFQRQQEELLAE---FNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRIN 179 Q R+ + L + HP WLL+ + Y E+ + I A+ + + +RIN Sbjct: 115 QLLRRGPKPLPKPESIADLALVTSHPQWLLQLWKAHYGEEKMRRIALADLEEAAVSVRIN 174 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 SR++ D A + + T + P ++G + +QD S+Q Sbjct: 175 PLKLSREALAQRPD--------WALESNGWTIRTAGNPVSDPWLKEGKIVIQDRSSQQVA 226 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L P+ + + D C+APG KTT + + ++A D+ RL+ V + +R G Sbjct: 227 LMLDPKPNDTVFDACSAPGTKTTQLAAMMNNEGSILACDLHAHRLALVEEAAQRCGATII 286 Query: 299 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + D Q +QFDR+LLD PCS GV+R P+I + E+ LQ+ IL Sbjct: 287 QTRTLDAAQADQQLAGRQFDRVLLDVPCSGLGVLRHKPEILLRLTPDSLDEIVALQAAIL 346 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 P K GGTLVY+TC++ +EN Q+ AFL + + EL T P Sbjct: 347 SHCAPLCKPGGTLVYSTCTLNRKENDKQVAAFLLQHPEFELMAEQT-------IFPDEGA 399 Query: 418 GDGFFYAKLIKK 429 DGF+ AK+ ++ Sbjct: 400 QDGFYIAKMTRR 411 >UniRef50_B2SFT3 tRNA and rRNA cytosine-C5-methylase, sun protein n=17 Tax=Francisella RepID=B2SFT3_FRATM Length = 426 Score = 385 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 150/432 (34%), Positives = 230/432 (53%), Gaps = 18/432 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQ-KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 N R++AA+ + +++ SL I L + + ++DK+ ++ LC+ R L+ +I Sbjct: 2 NTRAIAAKTILDILDNKYSLLTIEQKLVKLNLLEQDKSFIKLLCYEFFRHYYSLEKIIAL 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + + K + LIM+G Q+ + P +A + ETV +K K L+N +LR+ Sbjct: 62 YLTQKTKVKAKV---LIMLGALQIFEIKQPYYATINETVAACKVLKIIWAKKLVNRILRE 118 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 R E++ + + P WL L+K YP I +A N + M++R+N+ Sbjct: 119 MTRNIEDITS-IYTQNKAIDMPEWLCDTLKKQYPNDHLVIAQAINAKADMFIRLNQNK-D 176 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 L D+ + G+ + D ++L+ V F+ G+ T+QD SAQ + Sbjct: 177 NKKVLDYFDKNNI-GYSFTNLKDCIKLDQAIDVKYNQPFQQGYFTIQDISAQYAGHIIKA 235 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--GMKATVKQG 302 N + ILD CAAPGGKT+HILE AP+A + A+DI ++RL + +NL+RL V + Sbjct: 236 ANNDKILDACAAPGGKTSHILECAPQADITAIDIIDKRLELLRENLERLSENHNVNVFKH 295 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW- 361 D P +F++I+LDAPCSA G IRR+PDIK LR DI + LQS+IL +W Sbjct: 296 DLTLPLA----GKFNKIILDAPCSALGTIRRNPDIKVLRTPNDIQAIKSLQSKILANLWN 351 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ----PGKQNLPGAEE 417 +L G L+Y TCS+L EEN QIK FL + +AE+ E E+ G Q LP ++ Sbjct: 352 NNLTDNGYLLYITCSILAEENQQQIKEFLAKNNNAEIIEIDILEKYKTSYGYQLLPSQQD 411 Query: 418 GDGFFYAKLIKK 429 GDGF+Y L K Sbjct: 412 GDGFYYCLLKKN 423 >UniRef50_B6JAF7 SUN protein n=6 Tax=Alphaproteobacteria RepID=B6JAF7_OLICO Length = 446 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 146/447 (32%), Positives = 214/447 (47%), Gaps = 43/447 (9%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 R +AA ++ V+ + ++L + L P + +SD+D+AL++ L VLR L +L Sbjct: 17 ARRIAADIIDGVLHKRRTLDDQLEGAAQHPALKSLSDRDRALMRRLVATVLRRRGTLAYL 76 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP-QLKGLING 120 +++L+ R + +M+G Q+L+ +P HAA+ +V A +R + GL+N Sbjct: 77 LSRLLDRGVPSDAPRAQSALMIGAAQILWMDVPDHAAVDLSVRLVQADRRAAKYAGLVNA 136 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRIN 179 VLR+ R+ L+ E ++D P WL R KAY E +++ A PP+ L + Sbjct: 137 VLRRCAREGIPLIDE--STDEMIDLPPWLATRWIKAYGEDTARAMARAIGHEPPLDLTV- 193 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 ++W L + VR V LPGF +G VQDA+A Sbjct: 194 --KSDSENWATRLHGETLPT-------GTVRTLLHGSVTMLPGFSEGAWWVQDAAAALPA 244 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 G+ + DLCAAPGGKT + + A+V AVD RL+R+ +N RLG++AT Sbjct: 245 RLFGDIAGKPVADLCAAPGGKTAQLAQAG--AKVTAVDRSAGRLARLKENFARLGLEATY 302 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 D FD ILLDAPC ATG IRRHPD+ WL+ + D+ L+ LQ+ +L Sbjct: 303 VAADATE----WEAGPFDAILLDAPCMATGTIRRHPDVAWLKNEADLDALSALQARLLRK 358 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL------- 412 LK GGTLVY TCS+ PEE I A L+ + E G L Sbjct: 359 SVTLLKPGGTLVYCTCSLEPEEGEQAIAALLEAEPQMKRRPVEASELAGLSELISPMGDV 418 Query: 413 -----------PGAEEGDGFFYAKLIK 428 P DGF+ A+L+K Sbjct: 419 RTLPCHLQHDDPKLSGLDGFYAARLVK 445 >UniRef50_A6BZY6 Sun protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZY6_9PLAN Length = 477 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 137/457 (29%), Positives = 221/457 (48%), Gaps = 44/457 (9%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLI 62 R+ R +A +E+ Q +S+ + +++ +S D L E+ GV+R LD +I Sbjct: 31 RSARQLAFFLLEEYRRTDQFISDSMQQWERRIDLSSADWRLAMEISIGVVRRQLTLDTII 90 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQL-LYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + RP + + L+ +G YQL + +IP HAA++ETVE A ++R + K ++N + Sbjct: 91 ESQLTRPREKVEAPLWTLLQIGAYQLVMLDQIPDHAAVSETVELAGKLQRVRWKKMVNAI 150 Query: 122 LRQFQRQQEE------------------------LLAEFNASDARY-----LHPSWLLKR 152 LR R + L A A Y P +++ Sbjct: 151 LRSISRLTADDIATEPQSNTIPLSADRYRSFSIGLFPNPIADPAGYLSKAFSFPLPVIRD 210 Query: 153 LQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 + +Q + + NQR ++LRIN R+ L L G++ P D P A+RL Sbjct: 211 WLTRFSVQQTMQMAQWFNQRNNLYLRINALQTGREQLLEELQAEGIQVSP-GDEPQAIRL 269 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PE 270 E P + L GF G T+QD SA L PQ E + D+CAAPG KTTH+ E+ Sbjct: 270 EEPVAMENLVGFSAGKFTIQDQSAMAAGNLLNPQPEETVWDMCAAPGTKTTHLAELMYNR 329 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 ++A D+ RL ++ N RLG+ ++ P + +QFD IL+DAPCS +GV Sbjct: 330 GTLIATDVSCDRLEKIEQNASRLGLTC-IETHLVNQPDEIWSTKQFDAILVDAPCSNSGV 388 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 + + P+ +W + + EL Q+Q ++L+ + HLK+ G LVY+TCS P EN ++ L Sbjct: 389 LGKRPEARWRLDEVSLKELNQIQRDLLEQAFQHLKSSGRLVYSTCSFDPRENEDLLQDVL 448 Query: 391 QRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLI 427 + + +L ++LPG+ DG + A + Sbjct: 449 RDHPERKLVREN-------RHLPGS-PCDGGYQALIE 477 >UniRef50_C8PZ41 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZ41_9GAMM Length = 450 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 160/452 (35%), Positives = 241/452 (53%), Gaps = 29/452 (6%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 + Q N R+ +E++ +QG+SLS++L PL +VS+KDK EL G LR L Sbjct: 4 LHSQLNTRAKVVATLERI-QQGESLSSLLDPLLNQVSEKDKGFAHELLLGTLRQWWALAR 62 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 + L+ +T + V + +GLYQLLY P +AA+ ETVE + + GLIN Sbjct: 63 IGESLIEHEVT--DKGVWAALNIGLYQLLYMDTPDYAAIGETVEAVKQLDKGYGAGLINA 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 +LR+ Q+ + + + + P+WL K+L++ + E + + +A Q P++LR+NR Sbjct: 121 ILRKVQKNPAKFAKKIEKN---HSLPNWLAKQLKQDWGEYYAELGQALRQPAPIFLRVNR 177 Query: 181 THHSRDSWLALLDEAGMKGFPHA---DYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 S + + +L + G+ + + ++L + LP F +GWV+VQD AQ Sbjct: 178 KFCSVEDYADILTQQGIGFALVSIGFEKVQTIQLTDAIRITDLPKFAEGWVSVQDRHAQL 237 Query: 238 CMTWLAP---QNGEHILDLCAAPGGKTTHILEV----------APEAQVVAVDIDEQRLS 284 LA +LD C APGGK H+LE+ A V+A+D DE+RL Sbjct: 238 SAHILASLALDKSLTVLDACTAPGGKLAHLLELDESKTFHVKHQNIAHVIALDNDEKRLQ 297 Query: 285 RVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 RV NL+RL + Q + + + QFD I+LDAPC+ATGVIRRHPDI LR ++ Sbjct: 298 RVSQNLERLQLNQENVQLVCDDATTFQADTQFDVIVLDAPCTATGVIRRHPDIALLRTEQ 357 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT- 403 D+ + A LQ+ IL W +L T G L+Y TCS+L EN Q++AFL A++ + Sbjct: 358 DVGQTAALQARILANCWHNLATNGYLLYITCSMLKAENENQLQAFLATHKAAQIVDFSLN 417 Query: 404 -----PEQPGKQNLP-GAEEGDGFFYAKLIKK 429 + G Q LP +GDGF+YA L K+ Sbjct: 418 LPNQIKQNIGYQCLPLHQNDGDGFYYALLQKR 449 >UniRef50_C7RGU2 Fmu (Sun) domain protein n=4 Tax=Anaerococcus RepID=C7RGU2_ANAPD Length = 430 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 110/428 (25%), Positives = 210/428 (49%), Gaps = 13/428 (3%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 + ++ +++ + + + + L+++V + ++ +GVL +D++I KL Sbjct: 5 ELILNSLVRIICEDKKSNEEINYLEKRVGNL--PYATKVIYGVLENKIYIDYMIGKLSKI 62 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 + + V ++ +G+Y + + +A + + VE R + G +N +LR F R Sbjct: 63 KLKKIHKNVLTILEIGIYNIHFLETKDYATVDKLVELTKRKNR-RSSGFVNAILRNFIRD 121 Query: 129 QEELL-----AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH 182 ++E+ + + RY P + + + Y + + + +N + +RINR Sbjct: 122 EKEIAKIKISDDIKSLSVRYSMPEEITRYIFDNYGMDYTKDFLRYSNNEAVLSIRINRLK 181 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 +D+ + L G + +A+ ++ P+ + A F++G T+Q ++ + L Sbjct: 182 TDKDNLIKKLKAKGFEIEVSKISENALLVKNPSGLVATSEFKEGLFTIQQEASMKTVEVL 241 Query: 243 APQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 PQ ILDLCAAPG KT+++ E +++A DI + +L+ + +N++RLG+ Sbjct: 242 DPQKDSKILDLCAAPGTKTSYLAEYTRNSGKIIANDISKNKLNLIRENIERLGLSNIELD 301 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 + E++FD +L+DAPCS GV+ R P+I++ R DI LA+LQ +IL Sbjct: 302 SFDASVYRSDFEEKFDYVLVDAPCSGLGVMARKPEIRYNRTISDIKVLAELQRKILANAI 361 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 +LK G LVY+TC++ EN FL+ AD L + + + ++ DGF Sbjct: 362 RYLKPAGILVYSTCTLGNIENLDN-YNFLK--ADERLTSLEIDGKKYLEFVSFLDKTDGF 418 Query: 422 FYAKLIKK 429 F +K KK Sbjct: 419 FISKFKKK 426 >UniRef50_C7H5H8 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Faecalibacterium prausnitzii RepID=C7H5H8_9FIRM Length = 440 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 112/424 (26%), Positives = 184/424 (43%), Gaps = 17/424 (4%) Query: 20 EQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV 77 EQ + +L +QK+ +DKA + + VL LD+++ + + + + V Sbjct: 17 EQDGFSNLVLDAELRRQKLEGRDKAFAGAIFYTVLEHQGTLDFILEQFLPKGLARLDPQV 76 Query: 78 HYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR---QFQRQQEELLA 134 ++ L Q Y ++P AA+ E V+ K+ GL+N VLR + + Sbjct: 77 REILRAALAQARYMQVPVSAAVNEAVKLTRTFKKASASGLVNAVLRKACNYDLETARFRN 136 Query: 135 EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDE 194 E + + L+ YPE+ I+ LR N + L E Sbjct: 137 ETQRLMVLGSAGQDVAEFLRTHYPEEALGILTHTADGGCTSLRANCLKMDAAALCEKLLE 196 Query: 195 AGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLC 254 +G+K P +V + P F++G V+ ++Q + + G+ ++DLC Sbjct: 197 SGVKSAQPGLVPGSVLAKFEGSPAEHPLFKEGCFHVEGQASQLAALCVEAKPGDTVIDLC 256 Query: 255 AAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCG 312 AAPGGKT + E+ + + + D+ E R+ + ++R+G T D P+ Sbjct: 257 AAPGGKTLLLAEEMQGQGALYSCDVAEHRVGLIRSAVERMGFAHVTALCNDATRPNPKLP 316 Query: 313 EQQFDRILLDAPCSATGVIRRHPDIKW-LRRDRDIPELAQLQSEILDAIWPHLKTGGTLV 371 DRIL+DAPCS G++ + PDI++ EL QS ILD LK GG LV Sbjct: 317 --AADRILVDAPCSGLGILAKKPDIRYKTLEKARHDELLATQSSILDTAAALLKAGGRLV 374 Query: 372 YATCSVLPEENSLQIKAFLQRTADAELCETGTP-------EQPGKQNLPGAEEGDGFFYA 424 Y+TC++ P EN Q+ AFL R + + + G ++P DGFF Sbjct: 375 YSTCTIDPAENEEQVAAFLARHPEFRVVRPAVAFPDGMTVGEHGALSVPTRTGMDGFFLC 434 Query: 425 KLIK 428 + K Sbjct: 435 AMQK 438 >UniRef50_Q2S463 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S463_SALRD Length = 427 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 131/408 (32%), Positives = 194/408 (47%), Gaps = 16/408 (3%) Query: 37 SDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPH 96 + + +EL GV R LD+++ + + + ++ +GLY+LL+ P H Sbjct: 17 DARTRRQARELVAGVTRQRRWLDFVLGEAYHGDYDSMEHRLQEILRLGLYELLFQSTPTH 76 Query: 97 AALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDA-----RYLHPSWLLK 151 AA+ E VE A RP L+NGVLR R +E + DA RY HP+W+++ Sbjct: 77 AAVDEYVELAKQALRPGAGNLVNGVLRTIDRDREHIPTPDTGDDANDLALRYSHPTWMVQ 136 Query: 152 RLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVR 210 R + ++ ++ ANN+RP +RIN S A LDE + +R Sbjct: 137 RWLDRFGLDETTELLRANNRRPMYSVRINPLRTSEADVAAWLDEHDVVNVDSPYLDRYLR 196 Query: 211 LETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-P 269 L+ + A +DG V VQD SA + L PQ GE ++D CAAPGGK H Sbjct: 197 LKRLQALIAGDLLDDGHVAVQDESAGLVVQLLDPQPGETLIDGCAAPGGKAMHAAARMEG 256 Query: 270 EAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAPCSA 327 + AVD DEQRL RV + G + D R + Q DR+LLD PC+ Sbjct: 257 TGTIYAVDRDEQRLERVETAAEAQGASEMVEAETADLRAWAARPEPPQGDRVLLDVPCTG 316 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 GV+ + ++W R D+ E+A+LQ E+LDA ++ GG LVY+TC+ PEEN +++ Sbjct: 317 MGVLAKRAGLRWRRSMEDLEEMAELQDELLDAAAQLVRPGGLLVYSTCTTEPEENERRVE 376 Query: 388 AFLQRTADAELC-------ETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 AFL R + + + P DG F A+L + Sbjct: 377 AFLARHDGFAVESAEGHVPDEMVSDAGFLATFPHRHRMDGAFAARLRR 424 >UniRef50_Q1IIS1 Sun protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIS1_ACIBL Length = 432 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 125/445 (28%), Positives = 199/445 (44%), Gaps = 33/445 (7%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNIL-PPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 + R+ A + +V S +L +S D+ L EL G LR S LD L Sbjct: 2 SKNPSRATAFDILLRVERDQAFASELLHSDRLNDLSAPDRGLATELVMGTLRWQSTLDAL 61 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLING 120 + ++P+ V + + YQL + RIP +AA+ E+VE ++ N Sbjct: 62 VATQSSQPLRKLDIEVLIALRLAAYQLQFLDRIPANAAVNESVELVKRARKRSAVPFANA 121 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 VLR+ + E+ + HP+WL+ R + Y + +SI + P LR+ Sbjct: 122 VLRKISKLPREIHGDL-------AHPAWLVARWRDNYGGDAAESISKYGQTTPETALRLP 174 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 R A L E G++ P A RL + + F+ G V +QD ++Q Sbjct: 175 FDAEKRAKVEAELQENGVELAPGRLLNAARRLVSG-DLSGTAAFQRGDVWIQDEASQLVA 233 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 +G+ ILD CAAPGGKT+ + E P +++VA+++ EQR + + ++ + V Sbjct: 234 LLTG--HGDRILDCCAAPGGKTSVLAERNPSSKIVALELHEQRARLLRERVRASNVD--V 289 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 + D + E FD +L D PCS TG + R+P+IKW + D+ +L Q Q IL A Sbjct: 290 QTADATN---FRAETAFDCVLADVPCSGTGTLARNPEIKWRLKPEDLADLQQRQIAILRA 346 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC---------------ETGTP 404 L GG LVY+TCS+ PEE ++A L + + Sbjct: 347 ALSQLAPGGRLVYSTCSLEPEEGEAVVEASLTDEFELQPAAPELEQFAPAFAIPDPQTLV 406 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIKK 429 P + +PG +GFF A + ++ Sbjct: 407 RGPYLRTIPGIHPCEGFFAAVITRR 431 >UniRef50_Q651X9 Os09g0477900 protein n=3 Tax=Magnoliophyta RepID=Q651X9_ORYSJ Length = 570 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 121/464 (26%), Positives = 213/464 (45%), Gaps = 44/464 (9%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK------------------VSDKDKALLQELCF 49 R++AA + ++ + + + + ++D L+ + Sbjct: 105 RAVAAVRLLRIEKGKAFVDLLNEKGNSSGENEMSYVERTLGFSIRCLDNRDIRLVTVIVA 164 Query: 50 GVLRTLSQLDWLINKLMA--RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAI 107 G +R LD+LI L + + + + ++ +G +++L +P +AA+ E V A Sbjct: 165 GTVRWKRYLDYLIMSLCSEEKVFREMEPLLLQILRIGFFEILKLNVPAYAAVDENVRLAK 224 Query: 108 AIKRPQLKGLINGVLRQFQRQQE-----------ELLAEFNASDARYLHPSWLLKRLQKA 156 RP L+N +LR+ +E + A+ A Y HP W+++R + Sbjct: 225 VALRPGAGNLVNAILRKLLLLKEANSLPLPKIEGDDRAQARALSIIYSHPVWMVRRWIRF 284 Query: 157 YP-EQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGMKGFPHADYPDAVRLETP 214 E+ +++ NN P +R+N + ++R + L+ + E Sbjct: 285 LGKEEALKLMKWNNSDPHFSIRVNTANGYTRADLIDRLESLQVHYEKSTMDEFVRIQEGM 344 Query: 215 APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQV 273 V ++G VQD SA ++ + PQ GE I+D CAAPGGKT + ++ + ++ Sbjct: 345 QTVLQAGLLKEGMCAVQDESAGLVVSVVDPQPGETIIDCCAAPGGKTLFMAARLSGQGKI 404 Query: 274 VAVDIDEQRLSRVYDNLKRLGMKATV--KQGDGRYPSQWCGEQQFDRILLDAPCSATGVI 331 A+DI++ RL + + K + A + D R ++ FD++LLDAPCS GV+ Sbjct: 405 WALDINKGRLRILMEAAKLHNLDAMISDIHADLRLYAKET-TATFDKVLLDAPCSGLGVL 463 Query: 332 RRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ 391 + D++W R+ D+ EL LQ E+LD+ +K GG LVY+TCS+ PEEN +I AF+Q Sbjct: 464 SKRADLRWNRQFEDLEELMCLQDELLDSASMLVKPGGILVYSTCSIDPEENEHRIAAFVQ 523 Query: 392 RTADAELCET-------GTPEQPGKQNLPGAEEGDGFFYAKLIK 428 R D L ++ + P DG F A+L++ Sbjct: 524 RHPDFVLQSVHGYVPAEFVTDEGFYSSSPTKHSIDGAFAARLVR 567 >UniRef50_C8R080 Sun protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R080_9DELT Length = 501 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 149/491 (30%), Positives = 217/491 (44%), Gaps = 63/491 (12%) Query: 1 MKKQRN-----------LRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQE 46 MKK R+ R +A + + Q +Q + L +L + +D+ L++ Sbjct: 1 MKKNRSSSPTAAGEGLRPRQVALEILLQQEQQNRPLDQVLAEYPARRWPSDRRDRQLVRA 60 Query: 47 LCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEG 105 L + VLR LD ++ + P+ + + +GL QLLY R+PP AA+ ET+ Sbjct: 61 LVYEVLRRRGFLDHVVARYAKHPLAKMKPLTLAALRLGLAQLLYFDRLPPAAAIDETIRA 120 Query: 106 AIAIKRP-QLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQS 163 A ++P + G +NG+LR R++ ELL P+WL +R ++ E+ Sbjct: 121 LKAARQPRWITGFVNGLLRNAARERAELLRLAAEQCDWLSVPAWLRQRREQQLGQERAYH 180 Query: 164 IVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPG 222 A NQ PP+ LR+N + + L G++ P A+RL + V LPG Sbjct: 181 RSRAENQPPPLVLRVNTAKINCATLAEQLQHNGIEVEESTFAPAALRLPSYHGRVEELPG 240 Query: 223 FEDGWVTVQDASAQGCMTWL----APQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVD 277 F +GW VQD +AQ L P+ G LD CA GGKT H+ E+ P E+++VA++ Sbjct: 241 FNEGWFAVQDEAAQLVTMLLQKEPDPEPGALFLDACAGLGGKTAHLAELLPAESRLVALE 300 Query: 278 IDEQRLSRVYDNLKRLGMKATVKQGD-------------------------------GRY 306 R + + +NL RLG K D R Sbjct: 301 PHTGRFALLAENLARLGHKFFKLPPDGPPEELARRLQTAAAGKPAPLLLCPQTLASFARL 360 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 F ILLDAPCS GV+RRHPDI+W R+ D+P + Q +LD L Sbjct: 361 LDSASVAPAFQGILLDAPCSGLGVVRRHPDIRWNRQPEDLPRYCKQQIALLDQAAKLLAP 420 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP---------GKQNLPGAEE 417 GG LVYA CS PEEN I+A R + E+ + P G Sbjct: 421 GGVLVYAVCSNEPEENREVIQALTSRHPELEVTDPRPWLPPPAATLVDDEGYLRSTPETG 480 Query: 418 GDGFFYAKLIK 428 DGFF A+L + Sbjct: 481 LDGFFAARLQR 491 >UniRef50_A8YVW1 rRNA methylase n=27 Tax=Lactobacillus RepID=A8YVW1_LACH4 Length = 454 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 123/445 (27%), Positives = 217/445 (48%), Gaps = 24/445 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQL 58 + ++ R+++ + + +V++ G + L + +S D+ L + +G ++ L Sbjct: 13 LSTNKSARAISLETLIKVLQNGSYSNISLNNSLKHSDLSIADQNLATRIVYGTIQYRLFL 72 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKG- 116 ++ + L+ +T ++ + L+++ LYQ+++ ++P A L E + A + G Sbjct: 73 EYQLTGLLKTKIT--EKYLKPLLLMSLYQIIFLDKVPNRAVLDEANKLAKQFGKHHSSGY 130 Query: 117 -LINGVLRQFQRQQEELLAEFNA---SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 ++NG+LR F R+ L E + + P WL+K L + ++ QS++ + N Sbjct: 131 RVVNGILRAFIRRGVILPDEKDTIKYLSIKESVPEWLVKYLIDNWGMQKAQSVLSSINDP 190 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGF-PHADYPDAVRLETPAPVHALPGFEDGWVTV 230 +RI+ R+ L + G + + DAV + + FE G + + Sbjct: 191 AKNSVRISSL-ADRNKVFDQLKKEGYQPEWSNLSLNDAVL--SHGGISESDLFEQGKLII 247 Query: 231 QDASAQGCMTWLAPQNG--EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYD 288 QD +A + EH+LD C+APGGKT I E V A+DI E++L V + Sbjct: 248 QDEAASLVVEAFDFDQNQTEHVLDACSAPGGKTVQIAE-NIHGDVTALDIHEKKLRLVKE 306 Query: 289 NLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 N +R+ + K T K D R + +F +IL+DAPCS G++RR P+I++ + +D+ Sbjct: 307 NARRMHVLDKVTTKACDARKAHEIFKAGEFTKILVDAPCSGLGLLRRKPEIRYTKSLQDL 366 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ 406 L ++Q ILD+I LK G LVY+TCS+ EEN +K FL+ EL + Sbjct: 367 RNLQKIQLTILDSISKLLKAEGELVYSTCSISMEENEEVVKRFLRIHPGFELKPFSLSKL 426 Query: 407 PGK----QNLPGAEEGDGFFYAKLI 427 K + +P + DGFF AK Sbjct: 427 ESKTGMLKIMPDQDGNDGFFIAKFR 451 >UniRef50_B7CB38 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB38_9FIRM Length = 397 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 113/426 (26%), Positives = 194/426 (45%), Gaps = 32/426 (7%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +R +A+++VV + + L +V +KD+AL + +G ++ +K + Sbjct: 1 MRKWIWKALDEVVNKDVYSNLYLRNHLHEVDEKDRALATRIFYGTIQNYRYCKACWSKYV 60 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + L+ + YQLL+ ++P +A + + V A I + GL N VL + Sbjct: 61 K---NKLNPKMDVLLTMSTYQLLFLDKVPSYAIVNDAVNIAKKINM-KYAGLTNAVLHKV 116 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHS 184 + E + +Y P WL K Y E+ + +A+ PM++R N + Sbjct: 117 K------PIETDNMALKYSLPDWLYKMWTSQYGQEKALVMAKASVNILPMYVRRNVLNT- 169 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 +E+ DA+ + ++ G+++ QD + ++ P Sbjct: 170 --------NESDFDLDMFVRVQDALYIYKGNDYFHHDYYQKGYMSAQDEGSFEIAKFVDP 221 Query: 245 QNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 Q E ILD CAAPG K+ + E+ + + A D+ R + ++ KRLG+ + Sbjct: 222 QENERILDCCAAPGTKSMAMAEMMHNKGHIDAYDLHAHRKDLIENDAKRLGID--IIHAG 279 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 + +++ +DRIL D PCS GV+ R PDIK D+ L LQ IL+ + + Sbjct: 280 VQDATEFKSSNMYDRILCDVPCSGYGVLSRKPDIKLHMVPEDMDTLIPLQYSILNNVCQY 339 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFY 423 +K GGTLVY+TC++ +EN QI+ FL+ + L E T Q DGF+ Sbjct: 340 VKVGGTLVYSTCTMNKKENEKQIEKFLKAHKEFSLVEEKTIFSNATQ--------DGFYM 391 Query: 424 AKLIKK 429 AKL++K Sbjct: 392 AKLVRK 397 >UniRef50_C3WQ58 16S rRNA m(5)C 967 methyltransferase n=15 Tax=Fusobacterium RepID=C3WQ58_9FUSO Length = 435 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 117/439 (26%), Positives = 209/439 (47%), Gaps = 25/439 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N++ +A + QV ++G + L + ++ K+KA + E+ +GV+R LD++I Sbjct: 2 NVKQVAINLISQV-DKGAYSNIALNETFKTLNINSKEKAFITEIFYGVIRNKKFLDYIIE 60 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 K+ + L+ + +YQ+ + + E E A + ING LR Sbjct: 61 ---KNTKEIKKEWIRNLLRISIYQITFMDSDNKGVVWEATELAKKKYGVPISKFINGTLR 117 Query: 124 QFQRQQE---ELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 + R ++ + LA+ + Y P W L+K Y E + + + + P + +R+N Sbjct: 118 NYLRNKDSELKSLADEKNYEVLYSIPKWFCDMLEKQYGNENLKQAITSLKKIPYLSVRVN 177 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 + ++ + L E ++ D V + F+ G + QDAS+ Sbjct: 178 KLKYTEKEFEEFLKEKDIQIIKKI---DTVYYINSGLIINSEEFKTGKIIAQDASSYLAA 234 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L E +LD+CAAPGGKT + E + +++A+DI + ++ + N+K+LG+ Sbjct: 235 KNLGVMPNELVLDICAAPGGKTAVLTENMENRGEIIAIDIHQHKIKLIETNMKKLGIDIV 294 Query: 299 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 D R ++ ++FD+IL+D PCS GVIR+ P+I + + +I ELA+LQ EIL Sbjct: 295 KAIVMDARNVNK--QGRKFDKILVDVPCSGYGVIRKKPEILYSKNRENIEELAKLQLEIL 352 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL--------CETGTPEQPGK 409 ++ LK GG L+Y+TC++ EEN+ I+ FL+ + ++ + G Sbjct: 353 NSAADILKDGGELIYSTCTITDEENTNNIEKFLKEREEFKVEKLYILENVSGDYDKLGGF 412 Query: 410 QNLPGAEEGDGFFYAKLIK 428 E D F+ KL+K Sbjct: 413 CINYKEEIMDNFYIIKLVK 431 >UniRef50_C5X355 Putative uncharacterized protein Sb02g027560 n=1 Tax=Sorghum bicolor RepID=C5X355_SORBI Length = 574 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 120/465 (25%), Positives = 219/465 (47%), Gaps = 46/465 (9%) Query: 8 RSMAAQAVEQVVEQGQSLSNI------------------LPPLQQKVSDKDKALLQELCF 49 R++A + ++ + + + L + + D+D L+ + Sbjct: 109 RAVAVVRLLRIEKGKAFVDLLNEKANDSGEKEIGYVERTLGFSTRYLDDRDIRLVTVIVA 168 Query: 50 GVLRTLSQLDWLINKLMA--RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAI 107 G +R LD+LI L + + + + ++ +G +++L +P +AA+ E V+ A Sbjct: 169 GTVRWKRYLDYLIMSLCSEEKVFREMEPLLLQILRIGFFEILKLDVPAYAAVDENVKLAK 228 Query: 108 AIKRPQLKGLINGVLRQFQRQQE-----------ELLAEFNASDARYLHPSWLLKRLQKA 156 RP ++N +LR+ +E + A+ A Y HP W+++R + Sbjct: 229 VALRPGAGNMVNAILRKLVLLKETDSLPLPKIEGDDRAQARALSIIYSHPVWMVRRWIRF 288 Query: 157 YP-EQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGMKGFPHADYPDAVRLETP 214 + ++ ++ NN P LR+N + ++R + L+ + VR++ Sbjct: 289 HGKDEALRLMNWNNSDPHFSLRVNTSKGYTRADLVKRLESLQVHYEES-VMDGFVRIQEG 347 Query: 215 APVHALPGF-EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQ 272 G +DG VQD SA ++ + PQ GE I+D CAAPGGKT + ++ E + Sbjct: 348 MQAVLQAGLLKDGICAVQDESAGLVVSVVDPQPGETIVDCCAAPGGKTLFMASRLSGEGK 407 Query: 273 VVAVDIDEQRLSRVYDNLKRLGMKATVK--QGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 + A+DI++ RL + D K G+ + D R ++ ++D++LLDAPCS GV Sbjct: 408 IQALDINKGRLRILMDAAKLHGLDDIITDIHADLRLYAKET-TAKYDKVLLDAPCSGLGV 466 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 + + D++W R+ D+ EL LQ E+LD+ ++ GG L+Y+TCS+ PEEN +I AF+ Sbjct: 467 LSKRADLRWNRQFEDLEELICLQDELLDSASMLVRPGGILIYSTCSIDPEENEKRIAAFV 526 Query: 391 QRTADAE-------LCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 QR + + ++ + P DG F A+L++ Sbjct: 527 QRHPEFAPQSVCGYVPTEFITDEGFYSSNPTKHSMDGAFAARLVR 571 >UniRef50_A4U1B3 Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p:Antitermination protein NusB n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1B3_9PROT Length = 437 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 138/444 (31%), Positives = 206/444 (46%), Gaps = 34/444 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILP--PLQQKVSDKDKALLQELCFGVLRTLSQLD 59 + + RS+ +E V+ Q + L L P K++++D+A + L LR L Q+D Sbjct: 9 SRTADPRSIVLDLLECVLAQKRLLDETLDSEPRLTKLAERDRAFTRMLVATTLRRLGQID 68 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I + + RP+ K V ++ +G QLL+ PPHAA++ TV+ A LIN Sbjct: 69 AVIARCIDRPLPAKAGRVRNMLRLGAAQLLFLDTPPHAAISTTVDLAKNSPLAGFAKLIN 128 Query: 120 GVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRI 178 VLR+ R+ +AE +A P+W+ + Y P+ + I +A+ P+ + + Sbjct: 129 AVLRRLDREGRAWVAEQDAGPL--NTPAWMWQSWLDTYGPDTARLIAQAHQTEAPVDISV 186 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 W L+ M +R + V LPGF +G VQD +A Sbjct: 187 ---AGDPALWAERLEADIMPT-------GTLRRQAGGDVTQLPGFAEGAWWVQDLAASLP 236 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 + G+ + DLCAAPGGK + EA+V AVD +R+ R NL+RL + AT Sbjct: 237 AKLMGAVKGKRVADLCAAPGGKALQLA--VAEAEVTAVDRSAKRMVRFRRNLERLKLAAT 294 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + + D + W FD +LLDAPC+ATG +RRHPD L+ D+ LA Q +L Sbjct: 295 IVETD---VAGWQPPAPFDAVLLDAPCTATGTLRRHPDGVHLKGPGDVAYLADQQHALLK 351 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK--------- 409 A +K GG LVY CS+ P+E QI L+ A E PG Sbjct: 352 AAAAMVKPGGILVYCVCSLEPQEGEAQIIRLLESGAPLVRDPIEPSEIPGLDFVLTKQGE 411 Query: 410 -QNLPG----AEEGDGFFYAKLIK 428 + LP D FF A+L + Sbjct: 412 IRTLPHYLAEKGGMDAFFIARLKR 435 >UniRef50_UPI000174635C RsmB n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174635C Length = 414 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 141/431 (32%), Positives = 216/431 (50%), Gaps = 32/431 (7%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R +A Q + + ++++ ++ +D ALLQ L G LR + LD + Sbjct: 7 NSRQLALQILVEWERSEIYAADLIEKAAATHRLDHRDTALLQTLVMGTLRNIDLLDIWLE 66 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 ++ + +VH+L+ +G+ QLL +P HA + ETV A + +GL+N VLR Sbjct: 67 RVCDN--QHLETSVHWLLRLGIAQLLLLEMPAHAVVNETVNQA-----GKARGLVNAVLR 119 Query: 124 QFQRQQEELLAEFNASDA--RYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINR 180 + R++ LLA + R HPSWL +R K + + +++ E + Q ++R+N+ Sbjct: 120 RVDRERIPLLARMDRLPIAERTSHPSWLAERWTKQFGKSAAEALCEWDQQPASTYVRVNQ 179 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 H L + +P R +T G QD S Sbjct: 180 LHPQP------LTPEEVLPLEPISFPGFFRADTLPR----EWLASGRCYAQDPSTVIACD 229 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-AT 298 LAPQ GE ILD CAAPGGK+ ++ + + + +++ D +RL R+ NL+RL + A Sbjct: 230 LLAPQPGETILDACAAPGGKSAYLAQKMQNQGRILTCDSVPRRLQRMQQNLERLNVTIAE 289 Query: 299 VKQGDGRYP-SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 +Q D P Q DRILLDAPCS TGV+RR D++W E+AQLQ++IL Sbjct: 290 NRQVDWTKPLPPIWKGVQVDRILLDAPCSNTGVMRRRVDVRWRLDPEVFVEMAQLQTKIL 349 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 + P LK+GG+LVY+TCS+ EEN I +FL + +L ET + +LP + Sbjct: 350 STLSPLLKSGGSLVYSTCSLDREENEDIIASFLVAHPEFKLVET-------RSSLPWRDG 402 Query: 418 GDGFFYAKLIK 428 DG F A L+K Sbjct: 403 FDGAFAALLLK 413 >UniRef50_B9GFY0 Predicted protein n=6 Tax=Spermatophyta RepID=B9GFY0_POPTR Length = 527 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 125/465 (26%), Positives = 213/465 (45%), Gaps = 45/465 (9%) Query: 8 RSMAAQAVEQVVEQGQSLSNI------------------LPPLQQKVSDKDKALLQELCF 49 R+++A + ++ G + L + + D+D L+ ++ Sbjct: 62 RAVSAVRLMRIEMGGAFADLLNDKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVG 121 Query: 50 GVLRTLSQLDWLINKLMA--RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAI 107 G +R LD+LI L + + + ++ +G Y+++ +P +A + E V A Sbjct: 122 GTIRWRRYLDYLIGSLCHDEKAFRSMEPLLLQILRIGFYEIVKLDMPSYAVVDENVRLAK 181 Query: 108 AIKRPQLKGLINGVLRQFQRQQE-----------ELLAEFNASDARYLHPSWLLKRLQKA 156 RP ++NG+LR+ +E + A+ A Y HP W+++R K Sbjct: 182 VSLRPGAGNMVNGILRKLVLLKESNSLPLPKLEGDDRAQARALATLYSHPVWMVRRWTKL 241 Query: 157 YP-EQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGMKGFPHADYPDAVRLETP 214 E+ ++ NN P LR N +R + + + VR++T Sbjct: 242 LGQEKAIKLMMWNNDNPSFSLRANSGKGVTRADLVMQFNMLKVPHELSLHLDHFVRVKTG 301 Query: 215 APVHALPGF-EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQ 272 + G + G VQD SA ++ + PQ G+ I+D CAAPGGKT ++ ++ + Sbjct: 302 LQIVIQAGLLKQGLCAVQDESAGLIVSVVNPQPGDSIIDCCAAPGGKTLYMASQMHGQGM 361 Query: 273 VVAVDIDEQRLSRVYDNLKRLGMKATVKQ--GDGRYPSQWCGEQQFDRILLDAPCSATGV 330 + A+DI++ RL V + K + + D R ++ + D++LLDAPCS GV Sbjct: 362 LYAIDINKGRLRIVKETAKLHQVDGVITTIPSDLRTFAESYQLKS-DKVLLDAPCSGLGV 420 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 + + D++W RR D+ EL +LQ E+LDA +K GG LVY+TCS+ PEEN ++ AFL Sbjct: 421 LSKRADLRWNRRLEDLEELKKLQEELLDAASILVKPGGVLVYSTCSIDPEENEERVDAFL 480 Query: 391 QRTADAELCETG---TPEQPGKQNL----PGAEEGDGFFYAKLIK 428 R + + P+ K+ P DG F A+LI+ Sbjct: 481 LRHPEFRIDPVDRYVPPDFVTKRGFYSSDPVKHSMDGAFAARLIR 525 >UniRef50_Q1NQ57 Fmu, rRNA SAM-dependent methyltransferase n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ57_9DELT Length = 487 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 152/488 (31%), Positives = 221/488 (45%), Gaps = 64/488 (13%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M N+R +A Q + + GQ + +L ++ +D+ LL+ L +GVLR Sbjct: 1 MTPTANIRQVALQLLLAQEQSGQPVEQLLEHQLREHPLADGRDRRLLEALVYGVLRWRGL 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRP-QLK 115 LD ++ P+ + + +G+ QLL R+P AA+ ET++ A ++P L Sbjct: 61 LDQVVAGYARHPLAKMKPLTLAALRLGILQLLILERLPASAAINETIKALRAARQPRWLT 120 Query: 116 GLINGVLRQFQRQQEEL---------LAEFNASDARY--------------LHPSWLLKR 152 G +N VLR+ E L +AE A +Y HP WL +R Sbjct: 121 GFVNAVLRKAAADIERLGRQQYLAGLVAEGTAPTGQYASPDPLPMAVAAWLSHPPWLRQR 180 Query: 153 LQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 ++ Y E + + NN PP+ LR+N + LA L +AG+ P AV L Sbjct: 181 WEQRYGLELCRELCHINNCLPPLVLRVNLHRLTASELLAQLQKAGIAATAGDYAPAAVVL 240 Query: 212 E-TPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP- 269 V LPG+ GW VQD +AQ LA H LD CA GGKT H+ E+ P Sbjct: 241 PPGSGRVEDLPGYALGWFAVQDEAAQLVTMLLAGAGPGHYLDACAGLGGKTAHLAELLPP 300 Query: 270 EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD---------------------GRYPS 308 EA + A++ +R + NL RLG+ A + QG+ PS Sbjct: 301 EATITALEPQSRRALLLTANLHRLGVTARLIQGELAAHLPAAELEAAGASHDKKGDTIPS 360 Query: 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGG 368 + G + IL+DAPCS GVIRRHPDI+W RR ++ + Q E+L L+ GG Sbjct: 361 PFLG--FYRGILVDAPCSGLGVIRRHPDIRWNRRAAELKNYQRRQLELLSTAAELLQPGG 418 Query: 369 TLVYATCSVLPEENSLQIKAFLQRTADAELCETG---------TPEQPGKQNLPGAEEGD 419 LVY CS PEEN I+ L+R + L ++LP ++ D Sbjct: 419 VLVYVVCSFEPEENEEVIQLLLKRRPELRLSAPAPYLPVAARQLVRGDFFRSLP-SDGLD 477 Query: 420 GFFYAKLI 427 GFF A+L+ Sbjct: 478 GFFAARLV 485 >UniRef50_UPI0000E87C3C sun; rRNA methylase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C3C Length = 423 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 144/424 (33%), Positives = 231/424 (54%), Gaps = 13/424 (3%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINKLMARP 69 AA ++ V++ G +L ++ + + D ++ ++ + +G LR + Q ++LI KL+ Sbjct: 8 AAIIIDGVLD-GNNLDHVFEKILKNPDDSVQQSQVKAITYGTLRYMGQSNYLIGKLIKNK 66 Query: 70 MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ 129 + R + LI V +YQL + + V A I + L+N VLR F R + Sbjct: 67 IE--NRVLESLIHVAIYQLTQEAHTDFTVVDQAVRAAKKIDFRK-SNLVNAVLRTFLRNK 123 Query: 130 EELLAEFN-ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSW 188 E+L+ F S+++Y +P W + ++++ Y E W+ ++ N PPM +R+N+ + + + Sbjct: 124 EKLIQGFAGQSESKYNYPLWWVDKMKEQYVEHWEDVLRIGNVHPPMTIRVNKKKITVEKY 183 Query: 189 LALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGE 248 +L + + +A+ ++TP V +PGF +G+ +VQD AQ +L ++G Sbjct: 184 SDILRSNNINHV--LIHGNALIIDTPINVMDVPGFVEGYFSVQDYGAQLASEYLDLEDGH 241 Query: 249 HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS 308 +LD CAAPGGKTT ILE + + ++V+++ + R R+ +NL RLG++A V + + Sbjct: 242 WVLDACAAPGGKTTSILE-SHDVRLVSLEKNPLRALRIEENLLRLGLQAKVIKEPLDNDN 300 Query: 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGG 368 +W Q FDRILLD PCSA+G++RRH DIKWLRR D + Q E+L+ WP LK G Sbjct: 301 KWWDRQAFDRILLDVPCSASGIVRRHIDIKWLRRPSDFVNYGKSQLELLNNAWPLLKKNG 360 Query: 369 TLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG---KQNLPGAEEGDGFFYAK 425 L+Y TCSV EEN I AF + DA + PE Q LP DG +Y Sbjct: 361 KLLYVTCSVFQEENCDVIAAFCENHKDAIRGDIKFPEHVVSMKNQMLPSKH-HDGLYYEI 419 Query: 426 LIKK 429 L K Sbjct: 420 LEKN 423 >UniRef50_Q14PA1 Putative ribosomal rna small subunit methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PA1_SPICI Length = 423 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 116/436 (26%), Positives = 212/436 (48%), Gaps = 30/436 (6%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVS---DKDKALLQELCFGVLRTLSQLDWLIN 63 R +A + ++ + + +++L + ++ D+DK L+ + +G L+ L+++ N Sbjct: 3 AREVAWNILWKIFAKNKFSNHLLSNIVEQNDNFIDQDKTLIYRIVYGTLKNKLYLEYIAN 62 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + + + L+ + +YQ + RIP +A + E V + ++ P+ G IN L Sbjct: 63 QFIES--KKTNQKLQILLWMSIYQFRFLDRIPNYAIVNEAVNISKSVS-PKYAGFINTTL 119 Query: 123 RQFQRQQEEL-----LAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWL 176 ++ ++E+ E +Y PS L L+ Y E + ++ + P + Sbjct: 120 KKIFDSKDEIFEINIADETKKLSIKYSFPSSLYLILRNEYSEDIARQVMIDSLTIPKLSF 179 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 R+N SRD L+ + +V + PV F+ G + +QD + Sbjct: 180 RVNTLKISRDELLSKYSNYNLT----KSLVSSVGVIADKPVVNSEMFKKGLIFIQDEMSM 235 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKRLGM 295 L PQ + +LD+C+APGGK TH+ ++ ++ A DI E++++ + N RLG+ Sbjct: 236 RIAEILDPQETDRVLDMCSAPGGKATHLSQIINNKGIIDAYDISEKKINLIKMNASRLGI 295 Query: 296 KATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL-RRDRDIPELAQLQ 353 D R + E Q+D+IL DAPCS GVI+R P+IK+ ++++ L ++Q Sbjct: 296 TNIYPHLLDARKINS---EIQYDKILCDAPCSGLGVIKRKPEIKYHTLTNQELANLVEIQ 352 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLP 413 ++L+ + LK GG LVY+TC+ EN +QI+ FL + +D ++ T Q Sbjct: 353 EQLLEKAYQLLKPGGILVYSTCTFGGYENIVQIRNFLAKHSDLKIITTE-------QIFG 405 Query: 414 GAEEGDGFFYAKLIKK 429 DGF+Y K+ KK Sbjct: 406 YENNTDGFYYCKIRKK 421 >UniRef50_B3EF03 Sun protein n=11 Tax=Chlorobiaceae RepID=B3EF03_CHLL2 Length = 451 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 137/454 (30%), Positives = 201/454 (44%), Gaps = 32/454 (7%) Query: 1 MKKQRNL--RSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLS 56 M K+ ++ R +A + ++ + + L ++ D+AL EL GVLR Sbjct: 1 MTKKESMTSRELALKVLQNIESGEKKSGTALHEQLSHTSLNQNDRALATELVNGVLRRRL 60 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLK 115 LD I + + ++ +G YQL+Y RIP AA+ E+V A K + Sbjct: 61 TLDTFIGRYYHHRYEKAAPVLKNILRIGAYQLIYLDRIPHWAAVNESVSLARRYKGEHMA 120 Query: 116 GLINGVLRQFQRQ-------QEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEA 167 L+N VLR + + E HP WLL+R Y E+ ++I+ Sbjct: 121 KLVNAVLRNITPETISADLDPSGKMKEIQRLSITASHPEWLLERWIARYGKERAEAILAY 180 Query: 168 NNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGW 227 NN+ P RIN + +LA + + + E + G Sbjct: 181 NNRTPLTGFRINPLKTTPQEFLATENSKTARIGKSGLENFFLSTEFSC---YESAIKQGL 237 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRV 286 +TVQ+ + PQ G +LDLCAAPGGK+T E+ + AVD+ Q+L ++ Sbjct: 238 LTVQNPTQGLACLLCDPQPGSTLLDLCAAPGGKSTFCGELMQNTGNITAVDLYSQKLQKL 297 Query: 287 YDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 ++ LG+ + D R + EQ ILLDAPCS TGV+ R +++W Sbjct: 298 SEHAGELGITIISTAEADAR---TYLPEQPPAVILLDAPCSGTGVLARRAELRWKLTSET 354 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA--ELCETGT 403 I ELA LQ E+LD L GTL+YATCS+ P+EN QI+AFL R + + Sbjct: 355 ITELALLQVELLDHAASLLAENGTLLYATCSIEPKENEQQIEAFLIRHPEFMRDPASGAL 414 Query: 404 PEQPG--------KQNLPGAEEG-DGFFYAKLIK 428 PE LPG EG DG F +L K Sbjct: 415 PEPFASKAVPNGTLLTLPGEHEGFDGGFAQRLKK 448 >UniRef50_C1A605 Putative rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A605_GEMAT Length = 428 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 113/432 (26%), Positives = 186/432 (43%), Gaps = 31/432 (7%) Query: 19 VEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVH 78 + G L + +D+ +QEL +GVLR +LD ++ + ++ V Sbjct: 1 MRAGHMLDQSFERRTPTLDARDRRWVQELVWGVLRHRERLDAILATRIRGGLSVLDDGVL 60 Query: 79 YLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFN 137 ++ +G YQLL +PP+AA+ ++VE L+N VLR+ R++ + Sbjct: 61 DILRLGTYQLLSMDSVPPYAAIGQSVEAVKRKHGIGAGKLVNAVLRRIDRERATIEPALP 120 Query: 138 ASDA-----RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLAL 191 A ++ HPSW++ R + + ++ NN P+ +R D+ Sbjct: 121 ADPVDALALQHSHPSWVVGRWVSQFGIAETAQLLALNNTPAPVVVR--PHGVQADALAES 178 Query: 192 LDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHIL 251 L ++ + P+++ + P + + F G VQD +A + G + Sbjct: 179 LTQSDVSTRRVPLVPESLEITGPVALTEVDAFRRGQFYVQDPAATLVAQYAHVPEGSVVA 238 Query: 252 DLCAAPGGKTTHILEVAPEAQ-VVAVDIDEQRLSRVYDNLKRLGMK-------ATVKQGD 303 DLCAAPG K LE+A A+ V+A D E R+ R+ RLG+ D Sbjct: 239 DLCAAPGSKA---LEMARRARLVIAADRSESRVDRMRSGFDRLGIDTTSSNRAMVTLVAD 295 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 PS D +L+D PC+ TG RRHPD +W + D L LQ +IL A Sbjct: 296 ATQPSI----DPVDAVLVDVPCTGTGTFRRHPDARWRLQASDFAVLGALQRQILTAAAAV 351 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-------GTPEQPGKQNLPGAE 416 ++ G L+Y+TCS+ EEN + AFL D + ++ + LP Sbjct: 352 VRPNGLLIYSTCSLEAEENDEVVDAFLASHPDFVVEPPPAGVVSDAVIDRGRLRVLPQQH 411 Query: 417 EGDGFFYAKLIK 428 DG F ++ + Sbjct: 412 GFDGAFAVRMRR 423 >UniRef50_Q5P4P8 tRNA and rRNA cytosine-C5-methylases sun n=8 Tax=Betaproteobacteria RepID=Q5P4P8_AZOSE Length = 447 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 171/422 (40%), Positives = 247/422 (58%), Gaps = 14/422 (3%) Query: 12 AQAVEQVVEQGQSLSNI---LPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 A ++ + V G +L+ L D + +++L +G LR + D ++ +L+ + Sbjct: 35 AASLVETVLGGANLTEAYERLLRANPGWPDATRGAVRDLAWGTLRDYGRGDVVLRRLLHK 94 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 P+ + + + +L + H + + V+ A A+ P LKG++NGVLR+ R Sbjct: 95 PLPVALHALLLVALH---RLEHRPDQAHTVVDQAVDAA-AVLAPGLKGVVNGVLRKRLRD 150 Query: 129 QEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 + EL A A +A RY HP+W + +++ A+P W++ +EA NQRPPM LR+NRT S ++ Sbjct: 151 EHELAALVEADEAARYRHPAWWVAQVRAAWPGDWEAALEAGNQRPPMALRVNRTRASVEA 210 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 A L AG+ A+ DA+ L+ P PV +LPGF G V+VQDA AQ WL G Sbjct: 211 VEAELRNAGIGSRRLAN--DALVLDKPVPVASLPGFATGRVSVQDAGAQWAARWLDLAPG 268 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP 307 + +LD CAAPGGK HILE P ++VA+++D +R+ R+ DNL+RLG+ A V + D R Sbjct: 269 QRVLDACAAPGGKAAHILETKP-VELVALELDPKRVQRIRDNLERLGLDAQVLRADCRAL 327 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 W + FDRIL D PCSA+GV RRHPDIKWLRR D+ A Q++I+DA+WP L G Sbjct: 328 DTWWDGRPFDRILADVPCSASGVARRHPDIKWLRRREDVRRFAAQQADIVDALWPTLAPG 387 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLI 427 G ++Y TCSV EEN+ QI R D E E + +Q LP A + DGFFYA L Sbjct: 388 GRMLYVTCSVFNEENTAQIARLSARHPDLERLEIDGRLE--RQLLP-ATDHDGFFYALLG 444 Query: 428 KK 429 K+ Sbjct: 445 KR 446 >UniRef50_A7IBA4 Sun protein n=6 Tax=Rhizobiales RepID=A7IBA4_XANP2 Length = 471 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 146/443 (32%), Positives = 209/443 (47%), Gaps = 39/443 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R +A +EQV+ G +L + L + +D+AL + LR + L LI KLM Sbjct: 47 ARILAVDGLEQVLRHGAALEDALDADVA-LDPRDRALAYRILATSLRRIGTLRALIAKLM 105 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLKGLINGVLRQF 125 R + + +++ G Q+L+ +P HAA+ V+ A A + GL+N VLR+ Sbjct: 106 ERGLPKSAPRLESVLLAGATQILFMDVPNHAAVGLCVDVARADRNTAGFAGLVNAVLRRL 165 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHS 184 R+ + L+ + A P W+ +R KAY E ++I + PP+ + + Sbjct: 166 TREADALMVGISPDFADT--PEWMGQRWIKAYGLETTRAIAAMHKVEPPLDITV---KAD 220 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 W L + +VR+ PV ALPGF +G VQDA+A L Sbjct: 221 PALWAERLSGEVLPT-------GSVRILQAGPVRALPGFAEGDWWVQDAAAALPARLLGD 273 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 G + DLCAAPGGKT + A V AVD RL+R+ +NL+RL + A V GD Sbjct: 274 VKGLKVADLCAAPGGKTAQLAAAG--AIVTAVDRSSSRLTRLKENLERLKLSAQVVAGDA 331 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 S FD +LLDAPCSATG +RRHPDI +R D+ LA LQ+ ++ L Sbjct: 332 ADFS----GGPFDAVLLDAPCSATGTLRRHPDIAVNKRPGDLVTLAGLQARLIAHAADLL 387 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG----------KQNLP- 413 K GGTLVY+TCS+ PEE Q++ L +D E G + LP Sbjct: 388 KPGGTLVYSTCSLEPEEGEQQVERLLAARSDIIRAPIVPGEVEGIDPFITPQGDVRTLPS 447 Query: 414 -------GAEEGDGFFYAKLIKK 429 DGFF A+L ++ Sbjct: 448 HWMRGEAERSGLDGFFAARLKRR 470 >UniRef50_Q21DD2 Fmu (Sun) n=13 Tax=Rhizobiales RepID=Q21DD2_RHOPB Length = 450 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 139/447 (31%), Positives = 215/447 (48%), Gaps = 40/447 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 R +AA ++ V+ + ++L + L P + +SD+D+AL++ L +LR L L + Sbjct: 17 ARRIAADILDGVLHKHRTLDDQLEGAAAHPGLKTLSDRDRALMRRLVATILRRLGTLGHV 76 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP-QLKGLING 120 +++++ R + +++G Q+L+ +P HAA+ +V + +R + GL+N Sbjct: 77 LSRMLDRGLPTDAPRAQSALLIGAAQILWMEVPDHAAVDLSVRLVQSDRRAAKYAGLVNA 136 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 VLR+ R+ + L+ E P WLL R Y + ++I A + P + L + Sbjct: 137 VLRRCAREGQPLIDEVQGQSLD--VPPWLLARWSAHYGADTARAIARAIGEEPSLDLSV- 193 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 ++W + L + VR V LPGF+DG VQDA+A Sbjct: 194 --KSDAEAWASRLHGEVLPT-------GTVRTLLQGSVKMLPGFDDGQWWVQDAAAALPA 244 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 G+ + DLCAAPGGKT + A V A+D + R++R+ +NL RLG+ A Sbjct: 245 RLFGDLTGKSVADLCAAPGGKTAQLCNAG--AWVTAIDRSQSRVARLRENLGRLGLPAET 302 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 D G FD +LLDAPCS+TG IRRHPD+ WL+++ DI LA Q +L Sbjct: 303 AVADAAEW-PGNGGDGFDAVLLDAPCSSTGTIRRHPDVAWLKQEADIGALAAQQQRLLHK 361 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQN-------- 411 LK GGTLVY TCS+ PEE + I A L + + E G + Sbjct: 362 AVSLLKPGGTLVYCTCSLEPEEGEVAIAALLAGNSGMRRAPVDSSEVAGLGDLITPDGAL 421 Query: 412 ------LPGAE----EGDGFFYAKLIK 428 LP + DGF+ A+L+K Sbjct: 422 RTLPCHLPHPDPRLGGLDGFYAARLVK 448 >UniRef50_D0WMY6 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMY6_9ACTO Length = 534 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 128/456 (28%), Positives = 204/456 (44%), Gaps = 38/456 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILP--PLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A + + V E + +LP + ++ D A LC+G LR + D +I++ Sbjct: 69 ARLVAFEVLRAVDEDDAYANLVLPVEIARAGLNKLDAAYATNLCYGTLRMRGRWDAIISR 128 Query: 65 LMA-RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 R + V L+ +G QLL PPHAA+ ETV A G +N VLR Sbjct: 129 CAKGRRIYDIDPPVLDLLRMGCEQLLAMETPPHAAIHETVVIARNFFGQGTGGFVNAVLR 188 Query: 124 QFQRQQEELLAEFNASDAR--------YLHPSWLLKRLQKAYP------EQWQSIVEANN 169 + + + +S A + HP W+++ L+++ + +S++ A+N Sbjct: 189 RISEKAGQWPEIVRSSTASRTEFLSLWHSHPRWIVEALEESLEASGRSRDDVESVLAAHN 248 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 + L S ++ ++ A M+ FP P+AV L H L DG Sbjct: 249 APAKVALVA--RAISPEALAERVEAAKMEAFPGYLMPNAVLL-GRGDPHRLHPVRDGLAG 305 Query: 230 VQDASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEVAPE--AQVVAVDIDEQRL 283 VQD +Q A E LD+CA PGGKT + +A A++ A + E RL Sbjct: 306 VQDEGSQLIAALFAAAPIEGKDELWLDMCAGPGGKTATLAAIAQGRGARIHANEPQEHRL 365 Query: 284 SRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 V +++ ++ GDGR + +DR+L+DAPCS G +RR P+ +W + Sbjct: 366 DLVAASVEPWEDTVALRLGDGRELGTQEPDA-YDRVLVDAPCSGLGALRRRPEARWRKDP 424 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG- 402 +DIP LA+LQ ++L + + L+ GG LVY+TCS E ++ FL A+L + G Sbjct: 425 KDIPGLAKLQRQLLASAFKALRPGGALVYSTCSPALAETRDVVRDFLAAHGRAKLLDAGE 484 Query: 403 ----------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 + Q A+ DG F A + K Sbjct: 485 VANRVAIRDVSARDGMVQLWADADCTDGMFIALITK 520 >UniRef50_C6NTF2 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTF2_9GAMM Length = 443 Score = 365 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 165/429 (38%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK R R +A +++ + G L ++L + + + + LQ L LR L Sbjct: 1 MKPARLDRGLAIAGLQR-LWAGTRLDDLLMEMAPEQAG--RGTLQWLWSACLRQHGSLRR 57 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L L+ + + + + L+ + L +L + P A + + V + + +GL+N Sbjct: 58 LTELLLRKALRPEDEDLSALLHLALEELRAGQRPDFAVVNDWVGACALLHKEWARGLVNA 117 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 +LR++ R++E L E DA + HP WL++RLQ+ YP QW I+ AN + P+WLR+N Sbjct: 118 LLRRYLREREPL--EEQIRDAHWNHPQWLVRRLQQVYPTQWPDILAANLREAPLWLRVNP 175 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + ++ L EA + HA P+A+RL+T PV ALPG+E GWV++QD +AQ Sbjct: 176 QAITPAAYAERLAEASLPAQSHAGLPEALRLDTAVPVRALPGWERGWVSIQDGAAQRAAH 235 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-ATV 299 LAP+ E +LD CAAPGGKTTH+L Q+ A+D + RL R+ L+RL + ++ Sbjct: 236 ILAPRPDERVLDACAAPGGKTTHLLSFGVR-QLTALDRSQARLERLRRELQRLQLPLPSL 294 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 D W FD ILLDAPC+A+GVIRRHPDI RR+ D+ + Q +L A Sbjct: 295 HVADAADVDAWWDGMVFDAILLDAPCTASGVIRRHPDILLRRREDDVERVRHEQRRLLAA 354 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGD 419 +W LK GG L+Y TCSVLPEEN QI +FL+ DA P Q LPG E D Sbjct: 355 LWRVLKPGGRLLYCTCSVLPEENGEQIASFLEEHDDAR----ALPHPQCGQRLPGEEGMD 410 Query: 420 GFFYAKLIK 428 GFFYA L K Sbjct: 411 GFFYALLGK 419 >UniRef50_C5NYN0 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN0_9BACL Length = 441 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 113/444 (25%), Positives = 198/444 (44%), Gaps = 27/444 (6%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDW 60 N R +A + + ++++ + L KV ++DK + E+ +G ++ L+ Sbjct: 2 SNINARHIAYEVLYTIIQEDGYSNITLNKYFNQYKVEEQDKRFISEVVYGSIKNKLYLEH 61 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 ++ + V ++++ +YQLLY + P A + E V+ I +N Sbjct: 62 ILKSYSKGRVK---PKVKVILLMSIYQLLYMDKTPNFAVIDEAVKLGKKIAGNITGKFVN 118 Query: 120 GVLRQFQRQQEELLAEFNASDARY----LHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 G+LR +R L ++ + ++ PS L L+ Y E+ Q IV + N++ Sbjct: 119 GILRNIERNASNLDLKYKNATEKFCIENSCPSELYNILKIQYGVEKAQKIVISFNEKSKN 178 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 +R N ++ + L G D++ L +L F G+ VQD + Sbjct: 179 SIRYNPLKITKKDLIEKL---GSAVSESEICEDSLVLNKLNLDSSL--FTKGYYIVQDEA 233 Query: 235 AQGCMTW--LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 + + L ILD CAAPGGK+ HI + +++ D +L + DN ++ Sbjct: 234 SALVASSIGLPIDKKYKILDTCAAPGGKSLHIASKYFNSSLISCDKYIHKLKLIEDNKEK 293 Query: 293 LGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+ VK+ D + +FD ++ D PCS GVI+ P+IK+ + + ++A+ Sbjct: 294 LGITNIEVKEQDATLNNT-SFNNKFDIVICDVPCSGIGVIKNKPEIKYKITNSYVEDIAK 352 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------- 404 LQ ++LD ++K G L+Y+TC++ EN I+ FL+ D L Sbjct: 353 LQYDVLDNSKHYVKQEGILMYSTCTIDKRENIKNIEKFLKENKDFSLESISLKNSIVKTR 412 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIK 428 E + LP DGFF AKL K Sbjct: 413 ENGVLEILPDEYSCDGFFIAKLKK 436 >UniRef50_C1ZLP1 Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLP1_PLALI Length = 754 Score = 363 bits (933), Expect = 7e-99, Method: Composition-based stats. Identities = 133/458 (29%), Positives = 210/458 (45%), Gaps = 40/458 (8%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLI 62 R R +A +E + + + + +S D+ L EL G++R S L L+ Sbjct: 301 RTARELAFNVLEAHHAGNKHIGEVFDQAVDRTTLSPSDRRLAYELICGIVRRQSTLQALL 360 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 L+ R M +R + +I +GLYQ+ IP HAA+ ETVE A G +NGV Sbjct: 361 MSLVHRQMETLERPLQTIIKIGLYQIFLCQGIPQHAAVHETVELAKRANLRW-GGFVNGV 419 Query: 122 LRQFQ-----------------------RQQEELLAEFNASD------ARYLHPSWLLKR 152 LR R+ L A + P L++R Sbjct: 420 LRSAIQLMTENILTAPSSKALPIGHHQYRELTTDLFPSPTLTPGSYIAAAFSFPHDLVER 479 Query: 153 LQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 Y E + NQ LR+N R+++ L A D P+ +RL Sbjct: 480 WVGQYGVEATIRMAFWFNQVTETALRVNLLKTDRETFRQKLFAADFVAEA-GDLPETIRL 538 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PE 270 + + LPGF +G +VQD SAQ L PQ GE +LDLCAAPG KT H+ E+ + Sbjct: 539 LSTVRISTLPGFPEGEFSVQDLSAQHAARRLNPQPGEVVLDLCAAPGSKTCHMAELMQNQ 598 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 +++A D R+ +VY+N +RLG+ G + +FD++L D PCS TGV Sbjct: 599 GEIIAADTHGGRIRQVYENAERLGLSIIRTITIGPR-GENLPSMEFDKVLADVPCSNTGV 657 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 + + P+ +W + EL ++Q+ IL ++ GG ++Y+TCS+ P EN ++ FL Sbjct: 658 LGKRPEARWKYSPAHLDELREMQATILRTAAGKVRIGGRILYSTCSIEPLENEEIVQQFL 717 Query: 391 QRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 T++A + E+ ++ +PG+ DG + A + + Sbjct: 718 AATSEAGGPQFRLVEE--QKFMPGS-PADGAYQALIER 752 >UniRef50_D0LLT9 Sun protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLT9_HALO1 Length = 501 Score = 362 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 132/459 (28%), Positives = 200/459 (43%), Gaps = 38/459 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +R +A + + QV ++G + L + + +D+AL+ ELC+G LR +LD + Sbjct: 44 VRDVAHRVLRQVAKEGAFATLALGAALKSSGLDARDRALVTELCYGSLRQQMRLDRALAA 103 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L R + ++ V Y++L+ R+P HA++ V A + + G NGVLR Sbjct: 104 LTPRGLGKLDAATLSILRVAAYEILFLERVPAHASVNSAVRAARRLGGQRFAGFANGVLR 163 Query: 124 QFQRQQEELLAEFNASDAR----YLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRI 178 R+ E L + A + P W+L L + P + V A NQ P+ LR Sbjct: 164 TLAREGEPALPPESEPRAHLAIAWSTPGWILDALSEMVPAAELSEAVAAFNQPAPLTLRA 223 Query: 179 NRTHHSRDSWLALLDEAGMKG--FPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 S ++ L +G P A+ E F +G VQD AQ Sbjct: 224 --HGVSVEALAERLRALHPQGGFSLSPLAPQALLAEGLGDPELSQAFAEGQFAVQDLGAQ 281 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGM 295 LAP G +LD CA GGK+ H+ + PE +V A D +L + RLG Sbjct: 282 LAAHLLAPAAGARVLDACAGVGGKSAHLAALVGPEGRVDAADRSAGKLRLCAEGAARLGA 341 Query: 296 KATVKQG------DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 D +Q + +D +LLDAPCS GV+RRHP+ K + D+ E+ Sbjct: 342 DNVHTAALDLASDDAVAWAQAGLAEAYDAVLLDAPCSGMGVLRRHPEAKLRLQPGDVGEM 401 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG- 408 A LQ+ +LDA+ ++ GG LVY+ C+ E QI AFL R + L +P + G Sbjct: 402 AALQARLLDAVSARVRPGGVLVYSVCTFTRAEGPAQIAAFLDRRDEFALEAPPSPAESGV 461 Query: 409 ------------------KQNLPGAEEGDGFFYAKLIKK 429 + P DGFF A+L ++ Sbjct: 462 DWAAAGLTSEAAGAGAGTIRTWPHRHGADGFFLARLRRR 500 >UniRef50_A5WI31 Fmu (Sun) domain protein n=3 Tax=Psychrobacter RepID=A5WI31_PSYWF Length = 528 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 163/522 (31%), Positives = 234/522 (44%), Gaps = 100/522 (19%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 + +N+R + + +QGQSLS +L PL ++ DK L LR L Sbjct: 9 TQNKNVRVAVINTLLSI-QQGQSLSGLLDPLLNSLNGDDKGFAHALLLTTLRHWHATARL 67 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 ++ L P+ + V I +G+ QLLY + HAA+ ETVE I + GL+N V Sbjct: 68 LDSLADNPIDEIE--VRTTIQLGITQLLYLNVADHAAIHETVEAVKHIDYARASGLVNAV 125 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 LR+ + + + N + + P+WL ++L+ + E + + ++ Q PM+LR+N Sbjct: 126 LRKVAKNPNKFRKKANKN---HSLPNWLAQQLKVDWREHYDELTQSLRQSAPMFLRVNGL 182 Query: 182 HHSRDSWLALLDEAGMKGFPHA-----DYPD----------AVRLETPAPVHALPGFEDG 226 S+LA L EA + A PD A+ L PV LP FE+G Sbjct: 183 QTDSQSYLAQLTEADIAAELIALETSLKMPDTGETIGIKQQAIELIDSVPVSRLPEFEEG 242 Query: 227 WVTVQDASAQGCMTWLA----------PQNGEHILDLCAAPGGKTTHILEVAPE------ 270 +VQDA AQ + P +LD CAAPGGK H LE+ Sbjct: 243 IASVQDAHAQLAAPIIDALLQQVMSANPAEHIRLLDACAAPGGKLAHWLELLGNQEKQQT 302 Query: 271 -----------------AQVVAVDIDEQRLSRVYDNLKRLGMKATVK---------QGDG 304 ++ A+D + R++R+++NL+RL + A + D Sbjct: 303 GLFHVKQSDSQESTIDKVKLTAIDNEAPRITRIFENLERLQLPAPIVNSKLHLDIECVDA 362 Query: 305 RYPSQWC---GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 FD ILLDAPC+ATGVIRRHPDI LR + D+ QLQ +ILD +W Sbjct: 363 TTWQAKAVSADSSGFDAILLDAPCTATGVIRRHPDITLLRNEEDVQHTVQLQEQILDNLW 422 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE------TGTPEQPGKQNLP-- 413 P LKTGG L+Y TCS+L +EN Q++AFL R DA G ++ G+Q LP Sbjct: 423 PQLKTGGYLLYVTCSILKQENVEQMQAFLSRHKDAVAIAFDSETNWGIEQEVGRQCLPIY 482 Query: 414 --------------------------GAEEGDGFFYAKLIKK 429 GDGF+YA L K+ Sbjct: 483 KMTEALAPIAAQDDTPEAAKVQVNAQAPAGGDGFYYAVLKKQ 524 >UniRef50_Q9LK54 Similarity to SUN and FMU proteins n=3 Tax=Embryophyta RepID=Q9LK54_ARATH Length = 531 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 117/411 (28%), Positives = 196/411 (47%), Gaps = 27/411 (6%) Query: 44 LQELCFGVLRTLSQLDWLINKLMA--RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAE 101 + ++ G +R LD LI L R + + ++ +G+Y+++ +PP+A + E Sbjct: 120 VTDVVGGTIRWRRYLDHLIGSLCHNERTFRNMEPLLLQILRIGVYEIIKRDMPPYAVVDE 179 Query: 102 TVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFN-----------ASDARYLHPSWLL 150 V A RP +NG+LR+ +E+ A + HP W++ Sbjct: 180 NVRLAKVALRPGAGDFVNGILRKLVSLKEKDALPLPKVEGDDRAQARALATLHSHPVWMV 239 Query: 151 KRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGMKGFPHADYPDA 208 +R K ++ ++ NN P LR N +R + L+ + + Sbjct: 240 RRWVKYLGLDEATKLMIWNNNDPGFSLRANTGRDITRADLVERLNSLKVPHELSLHLEEF 299 Query: 209 VRLETPAPVHALPGF-EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE- 266 VR++T G ++G +VQD SA ++ + PQ GE I+D CAAPGGKT + Sbjct: 300 VRIKTGLQTVVQAGLLKEGICSVQDESAGLIVSVVKPQPGERIMDACAAPGGKTLFMASC 359 Query: 267 VAPEAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAP 324 + + + A+D++E RL + + K + T D R ++ E Q+D++LLDAP Sbjct: 360 LKGQGMIYAMDVNEGRLRILGETAKSHQVDGLITTIHSDLRVFAE-TNEVQYDKVLLDAP 418 Query: 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSL 384 CS GV+ + D++W R+ D+ EL +LQ E+LD+ +K GG LVY+TCS+ PEEN Sbjct: 419 CSGLGVLSKRADLRWNRKLEDMLELTKLQDELLDSASKLVKHGGVLVYSTCSIDPEENEG 478 Query: 385 QIKAFLQRTADAELCETG-------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 +++AFL R + + Q + P DG F A+L++ Sbjct: 479 RVEAFLLRHPEFTIDPVTSFVPSSFVTSQGFFLSNPVKHSLDGAFAARLVR 529 >UniRef50_C6XRR6 Fmu (Sun) domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRR6_HIRBI Length = 487 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 126/442 (28%), Positives = 200/442 (45%), Gaps = 40/442 (9%) Query: 8 RSMAAQAVEQVVEQGQSLSNILP--PLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R AA + ++V +G + L ++ D+ + + LR ++D + Sbjct: 64 RRAAADILMRIVHEGADMDEALASSKFFDELEGPDRGFARAIASAALRAFGRIDDALETY 123 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP-QLKGLINGVLRQ 124 + RP+ V L+ VG QL + P +AA+ TVE A K + G++N +LR+ Sbjct: 124 LDRPLEKIDPAVLSLLRVGCAQLWVLKAPSYAAVDATVEAARQWKPASRGGGMVNAILRR 183 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRIN-RTHH 183 R+ E + + A + P WL +R A E+ + P RI+ Sbjct: 184 AGREPEA----YESLPASRIWPDWLSERFSSALGEETTQNIAMMQMLEP---RIDLTVKS 236 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 ++W L+ A +VRL T A + L G+ +G VQD +A Sbjct: 237 DPEAWAQKLEG-------TALPSGSVRLPTGASLTELEGYVEGEWWVQDVAATLPAQLFG 289 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 G I DLCAAPGGKT + A+V A+D+ EQR+ +V +NL+R G+KA + D Sbjct: 290 DVKGLSIGDLCAAPGGKTMQLAS--KGAKVTAIDLSEQRIEKVRENLERTGLKAKTQVTD 347 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 R+ W + FD +LLDAPCSA G +RRHP+ W R D+ + + LQ +++ A + Sbjct: 348 ARH---WRPAEPFDAVLLDAPCSALGTLRRHPEGAWRRNDKGLDRYSGLQIKLVQAAYDM 404 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTA---------DAELCETGTPEQPGKQNLP- 413 +K+GGT++Y C+ LP E +K + + E + G +LP Sbjct: 405 MKSGGTMLYCVCTPLPAEGIEVVKEAVDSGKWISKPITPEEVPGYEHAIDDFGGLLSLPK 464 Query: 414 -------GAEEGDGFFYAKLIK 428 D F+ A+L K Sbjct: 465 FDIENPEDLITSDVFYMARLEK 486 >UniRef50_B6BVG1 Sun protein n=1 Tax=beta proteobacterium KB13 RepID=B6BVG1_9PROT Length = 412 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 124/422 (29%), Positives = 222/422 (52%), Gaps = 20/422 (4%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 AA+ + +++ G+ + + ++ + +K ++++ +G +R D+++ K + + + Sbjct: 8 AAKILSELI-SGRKIDTLFNRFLKE--ENNKNFIKDIVYGGIRDFYLNDYILKKFVKKDI 64 Query: 71 TGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE 130 + YL+M +YQ+ + + E V+ A I L+N VLR + R+++ Sbjct: 65 N--DHLIKYLLMNTIYQINHQSKAEFTVVNEAVKAAKKINNN-FYNLVNAVLRNYLREKD 121 Query: 131 ELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 +L+ RY +P W + L K YP +++I+ N R +RIN+ S + ++ Sbjct: 122 KLVTP-EEMYIRYSYPQWWVSDLMKEYPNDYEAILAIGNTRAKTVIRINQRQISLNDYID 180 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 LL++A + + +++ + LPG+E G VQD +AQ +L QNG +I Sbjct: 181 LLEQANIDYELTLE-DKYIQISNVKDITMLPGYERGHFYVQDPAAQLACDFLDIQNGMNI 239 Query: 251 LDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 LDLC+APGGK THILE + + DI ++R++ + N+KRL +K+ + + + Sbjct: 240 LDLCSAPGGKATHILERF-DVDLDCYDISKERINLIRSNMKRLQLKSNIIE-------KI 291 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 +++DRIL+DAPCS +GV+RR+ DIK +R+ +DI + + Q ++L+ W LK+GG L Sbjct: 292 DINKRYDRILIDAPCSGSGVVRRNIDIKLMRKQQDIEKFSNQQLQLLEEGWKILKSGGKL 351 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQN---LPGAEEGDGFFYAKLI 427 +Y TCS+ EN + FL + DA + P QN +P DG F+ Sbjct: 352 LYVTCSIFKHENENVVMKFLSKNKDAASQDLIIPNGFKYQNTQLIPNQF-HDGLFFKIFS 410 Query: 428 KK 429 K Sbjct: 411 KN 412 >UniRef50_Q8TGY3 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGY3_METKA Length = 450 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 107/396 (27%), Positives = 189/396 (47%), Gaps = 18/396 (4%) Query: 47 LCFGVLRTLSQLDWLINKLMAR--PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVE 104 L + VL+ LD +I ++ +T V + + ++++ P Sbjct: 53 LLYSVLQKRGLLDEVIEDVLEITDDVTELDTWVRNAARIAVNEVVFEDGDPDEVADVLHG 112 Query: 105 GAIAIKRPQLKGLINGV---LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAY--PE 159 + P ++ L+ + + E E + Y HP WL++R + + P+ Sbjct: 113 LVRRLANPGAAAIVKAFTLDLKDY--EPPEPEDELDRLKWEYYHPRWLIERWMEMFGDPD 170 Query: 160 QWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAG-MKGFPHADYPDAVRLETPAPVH 218 + +++EANN+RPP+ +R+N + L + P + +++ P+ Sbjct: 171 EVVALLEANNRRPPLTIRVNTLKVDPEELAERLQRKYRVTVEPGRFLDEILKIPEGLPIG 230 Query: 219 ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVD 277 +P +E+G +QD +A L P+ GE ++DLCAAPGGKTTH+ ++ E ++VA+D Sbjct: 231 EMPEWEEGLFVIQDEAAALASAVLNPKPGEVVVDLCAAPGGKTTHMAQLMGGEGKIVAID 290 Query: 278 IDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHP 335 +DE R+ R+ + +R+G+ DGR + G + D +L+D PCSA G I ++P Sbjct: 291 VDEVRMERLREIAERMGVLDCIETHLMDGREAPEKLGREFADAVLVDPPCSADGTIPKNP 350 Query: 336 DIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD 395 + +W ++ L + Q E+L A +K GG L+Y+TCS+ PEE+ ++ FL + Sbjct: 351 ERRWRITPDELERLPKFQYELLKAGAEMVKPGGRLLYSTCSMFPEEDEEVVRRFLDEHPE 410 Query: 396 AELCET-----GTPEQPGKQNLPGAEEGDGFFYAKL 426 EL E G + P E GFF A + Sbjct: 411 FELLEVKVGDQGFDMPEACRLFPHRHETCGFFIALM 446 >UniRef50_A3UKE9 RRNA methyltransferase RsmB n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UKE9_9RHOB Length = 450 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 137/439 (31%), Positives = 206/439 (46%), Gaps = 32/439 (7%) Query: 7 LRSMAAQAVEQVVEQGQSLSNIL--PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R++A AVE V+ + L L P +++ +D+A + + V+R LD + + Sbjct: 26 PRAVALGAVEGVLAKAVPLDGALAGRPEWKRMEPRDRAFARAIASAVIRRPIALDAALMQ 85 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLKGLINGVLR 123 ++ +P+ ++ H ++ G + L P HAA+ V + + K L N VLR Sbjct: 86 VLDKPLPDEEVRAHLILRCGAAERLILDTPAHAAVDAWVSLMAQDRHTARFKNLANAVLR 145 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 + Q ++ + + + P WL +R + Y E + PP + Sbjct: 146 RVVDQGKDAFLDSDPLE---DLPDWLAERWVETYGEPTARAIAIARSVPPTLDLTAKPGF 202 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 S+ + + ++ +R V LPGFE+G VQDA+A L Sbjct: 203 DAQSFAEEIGASVLET-------GTIRRPDIGAVDGLPGFENGDWWVQDAAAALPAKLLG 255 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 + GE + DLCAAPGGKT + A V+AVD +RL R+ DNL+R +KA + D Sbjct: 256 VKAGETVADLCAAPGGKTLQLAATG--ASVIAVDASPKRLKRLEDNLERTKLKAEIVAAD 313 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 + W + D ILLDAPCSATG +RR PD W ++ DI LA +Q +LDA + Sbjct: 314 ---VADWTAPEPLDAILLDAPCSATGTLRRRPDAAWAKQPGDIANLADIQRRLLDASFNQ 370 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQ------------- 410 LK GG LVY TCS+ EE QI+AFL+RT DA L E PG + Sbjct: 371 LKPGGRLVYCTCSLEREEGEDQIEAFLKRTPDARLDPVTADELPGLKAAITPDGAVRTRP 430 Query: 411 -NLPGAEEGDGFFYAKLIK 428 DGF+ A+++K Sbjct: 431 DLWSERGGLDGFYIARIVK 449 >UniRef50_C7GZX3 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZX3_9FIRM Length = 461 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 119/470 (25%), Positives = 223/470 (47%), Gaps = 56/470 (11%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 M+ R A A+ + E+G+ + + +S ++ A ++EL FG L+ +LD Sbjct: 4 METHDKKRLAAFWALYNI-EKGKYSNVAFEESTKGLSAREAAFVRELVFGTLKLNIKLDH 62 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLIN 119 +N L + K + L+ +GLYQL Y +P +AA+ ET+ A + + ++ GLIN Sbjct: 63 AMNHLKDKKARIKLKD-RILLRLGLYQLDYMDSVPDYAAVNETIAIAKKLVKNKV-GLIN 120 Query: 120 GVLRQFQRQQEEL------LAEFNASDARYLHPSWLLKRLQKA----------------- 156 +LR + R+++E+ L+ +Y +P W ++ + Sbjct: 121 AILRGYIRKRQEIEDSINDLSYIERLSVKYSYPLWFVREITNDEANNSCNKKLPANLSVQ 180 Query: 157 --------------YPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPH 202 Y + +S+++ N++ P+ +R N + + + ++E G++ P Sbjct: 181 KAINDRDTADQVPEYGAE-ESVLQCGNEKAPLCIRTNLKKITGEELVEKINELGIEALP- 238 Query: 203 ADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTT 262 A+ ++ + ++ G+ +VQD S+Q + L ++ +LDLC GGKT Sbjct: 239 GRAEGAINVKGSG-IFDTELYKKGYFSVQDESSQLAIEALDIKDC-KVLDLCCGRGGKTF 296 Query: 263 HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ-FD---R 318 I+E +V+++D E ++ ++ D KRLG K + D + + +D Sbjct: 297 AIIEQCKNVEVISMDKYEHKILQLKDEAKRLGHKVNIGVNDLFDENNLDKHCRLYDTIKY 356 Query: 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 ++LD PC+ +G +RR P+IK+ D + +L +LQ +LD + LVY TCS+ Sbjct: 357 VILDVPCTGSGTVRRRPEIKYAGEDTKLADLVKLQRTLLDRGAELMNDEDHLVYMTCSIF 416 Query: 379 PEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 +EN I AFL+R ++ +L + +Q P + DGFF+A L + Sbjct: 417 QKENMDNIDAFLKRHSEFKLLQY-------RQYTPEKDGTDGFFFADLKR 459 >UniRef50_C2HH21 Possible rRNA SAM-dependent methyltransferase RmsB n=2 Tax=Finegoldia magna RepID=C2HH21_PEPMA Length = 423 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 106/427 (24%), Positives = 194/427 (45%), Gaps = 10/427 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPL-QQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 N+R+ + + S +L + +D A ++ F + +D++I+K Sbjct: 2 NIRNEIINITNSINNKSGYSSELLKTYDYGDLDKRDIAYIKRCVFTEIENRFFIDYVISK 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + + V ++ + ++L+ + +A + E VE A + K +N VLR+ Sbjct: 62 CSDLELNKLDKIVLEILRMATTEILFMKTADYAVVDEAVELANNL--THYKDYVNAVLRE 119 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQS-IVEANNQRPPMWLRINRTHH 183 R L E + ++ LLK L K+Y ++ ++++ + ++ N+ Sbjct: 120 VCRI--NLDEEDLGDEIKFSINKELLKMLNKSYSKKTVKKLLKSFFYKSDFVIKQNKLKE 177 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 ++ L+ G H D+ + P + F++G +QD S C L Sbjct: 178 --NNLKTNLENQGFVLEEHPFLKDSFIVRNPESIIDTNEFKEGKFIIQDGSCSLCAEVLE 235 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLKRLGMKATVKQG 302 P +LD+CAAPG K+ +I E+ ++ DI+ ++ R+ +N+ + G++ Sbjct: 236 PMENSVVLDICAAPGSKSCNIQELTNNQSIIYCNDINNNKIDRIKENVYKCGVENVQYLN 295 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 Q +FDRIL+DAPCSATGVI ++P+IK R +D+ L + Q IL+ Sbjct: 296 FDANILQEGLINKFDRILVDAPCSATGVINKNPEIKLFRTKKDVENLVETQRRILENCEK 355 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQR-TADAELCETGTPEQPGKQNLPGAEEGDGF 421 +LK GG LVY+TCS+L EEN + + E + + + +P + GF Sbjct: 356 YLKKGGVLVYSTCSLLKEENEENVDYIEDKLNLKREDIDFYGDKNEFIKLMPFQKGTQGF 415 Query: 422 FYAKLIK 428 F +K +K Sbjct: 416 FISKFVK 422 >UniRef50_Q2T2A8 Sun protein n=76 Tax=Proteobacteria RepID=Q2T2A8_BURTA Length = 571 Score = 357 bits (916), Expect = 6e-97, Method: Composition-based stats. Identities = 155/436 (35%), Positives = 228/436 (52%), Gaps = 23/436 (5%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 A AV + +L+ + L + +Q++ + +R DWLI +L+A+ Sbjct: 142 AVDAVTRGAALPAALAAVHATLPANARAASRGAIQDIAYRAMRRRGTADWLIAQLVAKAP 201 Query: 71 TGKQRTVHYLIMVGLYQLLYTR----IPPHAALAETVEGAIAIKR-PQLKGLINGVLRQF 125 VH L++ L+ P + + V A + KGL+N VLR+F Sbjct: 202 PAH---VHALLVCAFALLVDDDEHAAYAPFTVVDQAVTAIGARRECSFAKGLVNAVLRRF 258 Query: 126 QRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 R++ L + AR+ + W + +++A+P+ W I+ + + P+ LR+N + Sbjct: 259 LRERAVWLERLQSDRRARWNYEPWWIDAVERAWPDAWPRILASGDAPGPLTLRVNARRMT 318 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 D++L +L + + A+RL + PV +PGF DG V+VQDA AQ WL Sbjct: 319 ADAYLDVLRAERIDAEKVGRH--AIRLASALPVERIPGFADGIVSVQDAGAQLAAEWLGA 376 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 ++G +LD CAAPGGKT HILE+A A+VVA++ D R R+ +NL RL + A V+ GD Sbjct: 377 RDGMRVLDACAAPGGKTGHILELA-HAEVVALESDPARAPRIGENLARLSLAADVRVGDA 435 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 PSQW + FDR+L D PCSA+G++RRHPDI+WLRR DIP L Q IL A+WP + Sbjct: 436 GDPSQWHDGRAFDRVLADVPCSASGIVRRHPDIRWLRRAADIPALVAEQRRILSALWPLV 495 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL----------PG 414 K GG L+YATCS+ PEE LQ + F DA + P PG Sbjct: 496 KPGGELLYATCSIFPEEGELQARWFGDACQDAVRLDAPGQLLPQGATGGAPAAGGSDEPG 555 Query: 415 AE-EGDGFFYAKLIKK 429 + DGFFYA+ K+ Sbjct: 556 RHVDHDGFFYARFQKR 571 >UniRef50_Q2WB24 tRNA and rRNA cytosine-C5-methylase n=3 Tax=Alphaproteobacteria RepID=Q2WB24_MAGSA Length = 431 Score = 356 bits (915), Expect = 7e-97, Method: Composition-based stats. Identities = 144/446 (32%), Positives = 214/446 (47%), Gaps = 35/446 (7%) Query: 1 MKKQRN--LRSMAAQAVEQVVEQGQSLSNILPPLQ-QKVSDKDKALLQELCFGVLRTLSQ 57 MK+ + R++A + V+++G+ L ++L + ++ D+D+ ++ L LR L Q Sbjct: 1 MKRASSTSPRAIAVDLLSMVLDKGRLLDDVLDDSRLSRLEDRDRGFVRMLLGTTLRRLGQ 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGL 117 +D LI + +PM + + +G+ QLL+ + PHAA++ TV+ K L Sbjct: 61 IDTLIEHCLDKPMRAGAAGAEHALRLGICQLLFLDVAPHAAISTTVDLVKGSKLAGFAKL 120 Query: 118 INGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWL 176 +N VLR+ R+ +L A +A P WL + KAY E +I A+ P+ + Sbjct: 121 LNAVLRRLDREGRDLAAAQDA--GLLNTPEWLWRSWVKAYGEDGAHAIAAAHLIEAPVDI 178 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 + W L+ + + ++R V ALPGF+DG +QDA+A Sbjct: 179 TV---AADSALWAERLEASVLPT-------GSLRRAAGGSVAALPGFDDGAWWIQDAAAA 228 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L G+ + DLCAAPGGK + + + A+D +RL R NLKRLG+K Sbjct: 229 LPARLLGDVRGKAVADLCAAPGGKALQLAVAGAD--LTALDRSAKRLVRFTANLKRLGLK 286 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 A V + D W FD ILLDAPCSATG +RRHPD+ + ++ +LA +Q+ + Sbjct: 287 AKVVEADA---GAWTPPAPFDAILLDAPCSATGTLRRHPDVARHKNPAEVMKLAGVQARL 343 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG-------- 408 L A P LK GGTLVY TCS+ EE QI A L A E G Sbjct: 344 LQAAIPMLKPGGTLVYCTCSLEAEEGPEQIAALLAGGAPLRRVPIRPEEVGGLAELITPE 403 Query: 409 --KQNLP----GAEEGDGFFYAKLIK 428 + LP D FF A+L K Sbjct: 404 GDLRTLPCHLASQGGMDAFFAARLEK 429 >UniRef50_C7I4U3 Sun protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I4U3_THIIN Length = 457 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 173/444 (38%), Positives = 234/444 (52%), Gaps = 22/444 (4%) Query: 4 QRNLRS--MAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLD 59 QR LR +A + V+ G SLS LP + K + Q L F VLR L + Sbjct: 15 QRPLRRDLIACAQLIGAVQAGASLSTALPQAATRGKWDASQRGAAQALSFAVLRHLGTVR 74 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYT---RIPPHAALAETVEGAIAIK-RPQLK 115 L+ L +P+ + ++ L LL H + + VE + Sbjct: 75 ALLTDLQPKPIH--PPLLRDVLQTALALLLPDAPAHYAAHTVVNQAVEACKRTPSLRHAQ 132 Query: 116 GLINGVLRQFQRQQEELLA-EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPM 174 G N +LR+F + ++ A +AR+ HP W ++ LQ AYP WQ ++E ++P M Sbjct: 133 GFANALLRRFVSRTADIEAVRMRTLEARWNHPDWWVQALQSAYPADWQGVLEVAQRQPAM 192 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFP--HADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 LR+N SR ++ A L G+ A+ L+ V LPGFE GWV+VQD Sbjct: 193 TLRVNPRLQSRTAYQAALAACGLPCTAPDDPLLDQALILKQAVAVERLPGFERGWVSVQD 252 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 A+AQ L Q G+ +LD CAAPGGKT H+LE + ++A+D D QRL RV D L R Sbjct: 253 AAAQYAAALLDVQPGQRVLDACAAPGGKTAHLLERC-DCDLLALDKDAQRLRRVEDTLDR 311 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 LG++A D +P+ W Q FDRILLDAPCSA+G+ RRHPDI+WLRR DIP LA Sbjct: 312 LGLQARTLAADAAHPATWWDGQPFDRILLDAPCSASGIARRHPDIRWLRRAADIPALAAT 371 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG---TPEQPGK 409 Q+ +LDA+WP L+ GG L+Y TCSV P+E Q +AFL R ADA P++P Sbjct: 372 QAVLLDALWPLLRPGGKLLYVTCSVFPQEGVEQARAFLARHADAIASPAPGQLLPQEPAF 431 Query: 410 ---QNLPG--AEEGDGFFYAKLIK 428 ++ PG DGFFYA K Sbjct: 432 DQTRDDPGAARHSQDGFFYALFTK 455 >UniRef50_Q2SSR7 RRNA methyltransferase RsmB (Sun protein), putative n=4 Tax=Mollicutes RepID=Q2SSR7_MYCCT Length = 428 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 115/436 (26%), Positives = 208/436 (47%), Gaps = 27/436 (6%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK-VSDKDKALLQELCFGVLRTLSQLDWLI 62 N RS+A +++V + +L + +K ++ +DK + L GV+ LD+L+ Sbjct: 9 TMNSRSIAFDILKKVFVNKAYSNVLLNKISKKNLNQQDKDFVFNLVHGVISNKIHLDYLL 68 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGV 121 KL+ T + ++++ LYQ++Y IP +A + E+V + Q IN + Sbjct: 69 AKLIDVKKTSID--LQVILLISLYQMIYLNSIPNYAIVNESVNLIKTTSQKQ-ANFINAI 125 Query: 122 LRQFQRQQEELLA-----EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPP-MW 175 L +F R +++ L + + L L K Y ++ + + NN + P ++ Sbjct: 126 LNKFLRFKDKYLEINLDNKDLELCILHSFSYELYLMLIKQYDKEIVNQIVVNNHQIPKLY 185 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R+N + D + + + D + + +++G++T+QD ++ Sbjct: 186 IRVNTLKITSDQLFNKYKD--IYLLEKTNVNDCLI--ANKTIINSDLYKNGFITIQDKAS 241 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 L P +LD+C+APGGK TH+ + + +VA +I+E ++ + +N+ RL Sbjct: 242 ILVSQILNPSLNTKVLDMCSAPGGKLTHLSMILKNTGNIVANEINESKIKLIKENITRLN 301 Query: 295 -MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + +V D R Q Q+FD ILLDAPCS GV +R P+IK + + LQ Sbjct: 302 CLNISVINMDARKIKQ---RQEFDYILLDAPCSGFGVFKRKPEIKLRFDQIQVNSIINLQ 358 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLP 413 E+L++ + +LK G +VY+TC++ +EN QI FL + D + +Q Sbjct: 359 EELLESAYYNLKNNGEMVYSTCTINQDENQNQINKFLNKHKDM-------IKLYEQQIFG 411 Query: 414 GAEEGDGFFYAKLIKK 429 E DGF+ KL K+ Sbjct: 412 FEENTDGFYICKLKKQ 427 >UniRef50_B3R820 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent n=2 Tax=Cupriavidus RepID=B3R820_CUPTR Length = 477 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 166/469 (35%), Positives = 236/469 (50%), Gaps = 57/469 (12%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKV------SDKDKALLQELCFGVLRTLSQLDWLINK 64 AA AV V +G +L + ++ + LQ++ + +R L+ K Sbjct: 15 AATAVRAV-SEGTALPQAIEDAAAQLKLDRVRDAATRGALQDIAYRTMRQFGTARALVTK 73 Query: 65 LMARPMTGK------------------QRTVHYLIMVGLYQLLYTRIPPHA---ALAETV 103 L+ RP + R H ++ R P ++ + + V Sbjct: 74 LVTRPPGAQVDSLLAVALALLLEHGPGPRDRHDGADAARHEADAGR-PGYSTFTVVDQAV 132 Query: 104 EGAIAIKR-PQLKGLINGVLRQFQRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQW 161 A + + +GL+N VLR+F R+++ LLAE N + AR+ P W L+ L++AYP+QW Sbjct: 133 SAAASEPKTAHARGLVNAVLRRFLRERKALLAEVNRDEQARWNLPPWWLRLLREAYPDQW 192 Query: 162 QSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALP 221 ++ + N RPPM +R+N S + L AG+ G P AVRL PV+ LP Sbjct: 193 MALAASANVRPPMTVRVNTARVSVPQYRTDLANAGLAGHVVG--PQAVRLVRAVPVNQLP 250 Query: 222 GFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQ 281 GF +G V+VQDA AQ L +G +LD CAAPGGKT H+LE+A + +V AV+ D Q Sbjct: 251 GFAEGVVSVQDAGAQLAAPLLEVADGMRVLDACAAPGGKTGHLLELA-DIEVTAVESDPQ 309 Query: 282 RLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR 341 R +R+ +NL RLG A + GD P+ W Q FDRIL D PCSA+G++RRHPDI+WLR Sbjct: 310 RATRIGENLARLGKSAKIVVGDASRPADWWDGQPFDRILADVPCSASGIVRRHPDIRWLR 369 Query: 342 RDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET 401 R+ DI L Q I+ +WP LK GG LVY TCS+ P E Q + F ++ ADA + Sbjct: 370 RETDIARLITEQRRIVSQLWPLLKPGGILVYVTCSIFPTEGEEQARWFGEQLADAIRLQA 429 Query: 402 GTPEQPGKQ---------------------NLPGAEEGDGFFYAKLIKK 429 PG +LP DGFFYA+ K+ Sbjct: 430 PGQLLPGTHATLAAGADGDKATLDSSTDGTSLPSDH--DGFFYARFQKR 476 >UniRef50_A3VQU7 TRNA and rRNA cytosine-C5-methylase-like protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQU7_9PROT Length = 455 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 125/446 (28%), Positives = 205/446 (45%), Gaps = 34/446 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLD 59 + R A + + +GQ+L + + + D+ + L VLR + LD Sbjct: 25 EPGLPARRAALDILLAI-RRGQALDMAMAESEAFEDLEGADRGFARTLIMAVLRRQNTLD 83 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIK-RPQLKGLI 118 + RP+ Q TV L+ + Q+L +PPHAA A TV+ A + L+ Sbjct: 84 EAYGTFLDRPLKSTQGTVITLLRLAAAQILLLGVPPHAATATTVDLAKERRDSAGFAKLL 143 Query: 119 NGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRI 178 N + R+ + L+ ++ R P WL +RL++ Y + + A + P Sbjct: 144 NALCRRMVEKGPSLIEDYPP---RTDVPGWLWRRLERHYGAKTARRLAAAFVQEPALDLT 200 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 + R+ L+ H P ++R + LPG+ +G +QD +A Sbjct: 201 PKDPKERERLATALEA-------HPLGPVSLRRTAGGRIEDLPGYTEGDWWIQDLAAALP 253 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 ++ L G+ + DLCAAPGGKT + A V AVDI +RL R+ DNL RLG++A Sbjct: 254 ISLLGDLTGQRVYDLCAAPGGKTAQLAAAG--AHVTAVDISAKRLRRLEDNLARLGLRAD 311 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 GD + ++ D ++LDAPC+ATG +RRHPD+ W +++ D+ EL+ LQ ++L Sbjct: 312 TFVGD---VLGFSPDEPADLVVLDAPCTATGTVRRHPDLLWSKKEEDVAELSALQDQMLH 368 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA-----------ELCETGTPEQP 407 ++ GG L++ TCS+L EE + +AFL R + L + Sbjct: 369 HAARLVRPGGRLMFITCSLLAEEGEDRSRAFLSRHSQFTAEPLSDDEKERLGPLNAAKDG 428 Query: 408 GKQNLP----GAEEGDGFFYAKLIKK 429 + P A DGF+ A+ ++ Sbjct: 429 HLRTRPDLIADAGGMDGFYAARFTRQ 454 >UniRef50_Q9V089 Sun/NOL1/NOP nucleolar protein n=3 Tax=Pyrococcus RepID=Q9V089_PYRAB Length = 450 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 101/445 (22%), Positives = 202/445 (45%), Gaps = 25/445 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKD----KALLQELCFGVLRTLSQLDWL 61 +L + A A+ V E+ S + L + ++V KD + + F + + +++D++ Sbjct: 8 SLHEIIADALTLVEEKELSSKHALERIFKRVEGKDKETARGIAHAYVFEIEKWRAKIDFI 67 Query: 62 INKLMA-RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 +N ++ + + L+ +G +++ + + P A V N Sbjct: 68 LNSVLRGSKVEDLDLYLANLLRIGTFEMKFKGVNPAIATDSVVRVVKEKFDLTKAKFANA 127 Query: 121 VLRQFQR-------QQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 +LR+ ++ ++ + R+ HP W ++ + ++ ++ +N + Sbjct: 128 ILREVEKFNVEKALRKLKEKDRIEWLSVRFSHPRWYVEYIIDMLGYDEAVRLLLSNLRPQ 187 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 ++R+N D L+E G++ L+ PV L G+ +QD Sbjct: 188 RYYVRVNTLKADIDKVRRYLEENGVRVALTPVDDVLKVLDYEKPVTRLEWHRKGYFVIQD 247 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLK 291 ++ L P+ GE +LDL AAPG KT H + + ++VAVD RL ++ + +K Sbjct: 248 LASAYVAHVLNPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRLMKMKERMK 307 Query: 292 RLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+K + DG+ + + F++I+LDAPCS++G R+ P++KW + I + Sbjct: 308 RLGVKNVKLVHADGQ---SFIDREGFEKIILDAPCSSSGTYRQFPEVKWRFDEEKIKRVI 364 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-----AELCETGTPE 405 +Q +L + +L++GG + Y+TCS+ +EN + L++ + E + G E Sbjct: 365 SVQRNMLLNAYRNLRSGGEMTYSTCSIRIDENEENVIFALEKGFEIVDYPFEWGDKGFLE 424 Query: 406 --QPGKQNLPGAEEGDGFFYAKLIK 428 + + + + FF AKL K Sbjct: 425 IGEKVFRAWTHKHDCNSFFIAKLRK 449 >UniRef50_C8NZ84 rRNA methylase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ84_ERYRH Length = 404 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 108/428 (25%), Positives = 200/428 (46%), Gaps = 35/428 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R + + + +V +G+ +L L + +D+A + + L+ LD+ L+ Sbjct: 3 RIESYKVLSEVYFKGRHAHLVLKEL--DLPAQDQAFVSAFVYATLQNSLFLDYQYEDLVD 60 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF- 125 + + V +I +G Q +IP +A ++ETV+ AI + + G++N VL++ Sbjct: 61 KKLPK---EVRLVIKMGCAQYFKMDKIPDYALVSETVDLCKAIGKHRYSGVVNAVLKKVI 117 Query: 126 QRQQEELL-AEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINRTHH 183 +R + E+ ++ + +Y P W++K L K Y E + + + P ++R N Sbjct: 118 ERNEREISGSDLEVASIQYSMPLWIMKLLSKQYSESFSLAYAQYCQDIKPTYVRFNALKP 177 Query: 184 SRDSWLA-LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 + D +LD+ + + ++G+V VQD ++Q + W+ Sbjct: 178 TTDDLSDFILDDQD-------------KHLAKPALFKSKYLQEGYVLVQDINSQEVVRWM 224 Query: 243 APQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVK 300 + +LD C PG KT I + + V++ E R L+R + A + Sbjct: 225 DLEPSLSVLDCCCGPGTKTVQIANYLENSGTITGVELHESRAEATRALLERCNVVNANII 284 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 D Q+ +Q++DRIL+DAPCS GV+ D+++ +D+ EL ++Q E+L Sbjct: 285 TSD---VLQFQTDQKYDRILVDAPCSGLGVLSHKHDLRYHIFPQDLDELVKIQQEMLIHT 341 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 +K G LVY+TC++ +EN Q++ FL ++ EL + T P +GDG Sbjct: 342 SQFVKKDGILVYSTCTLNRKENEKQVQTFLDHHSNFELIKEVTLN-------PVETKGDG 394 Query: 421 FFYAKLIK 428 F+ AKL + Sbjct: 395 FYIAKLKR 402 >UniRef50_A7IDU9 Fmu (Sun) domain protein n=2 Tax=Xanthobacteraceae RepID=A7IDU9_XANP2 Length = 478 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 117/467 (25%), Positives = 203/467 (43%), Gaps = 57/467 (12%) Query: 7 LRSMA-AQAVEQVVEQGQSLSNILPP---LQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R A + + +V + ++ ++++ D+D+ + +L + +LR +++ W + Sbjct: 17 ARLQATLELMHEVDSVARPADAVVSAWFRARRQIGDRDRGQIYDLLYALLRHHARIVWWL 76 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQL------------------------LYTRIPPHAA 98 K RP + R + +L + G L ++ P Sbjct: 77 AKH-GRPDVPRNRLLAWLALDGGTALGGKTSGNKTSGNKTSGNKTSGNKTSGSKTPD--- 132 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQR------QQEELLAEFNASDARYLHPSWLLKR 152 VL +R Q + + R+ PSW ++ Sbjct: 133 --------QIHGLFSGGKFAPAVLTDHERALLLKLQGCTIDHPAMPDEVRFECPSWAVEP 184 Query: 153 LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE 212 L++ + + ++ + A PP+ LR+N +R++ L L + G+K P P +R++ Sbjct: 185 LRRRFDDTFEREMAALLTPPPLDLRVNPVKSTREAMLRALRDLGLKAEPSRLAPFGIRVK 244 Query: 213 TPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEA 271 + +LP + G V +QD +Q + + GE ++D CA GGKT I ++A + Sbjct: 245 ERPSLASLPMLKSGEVEIQDEGSQLVAMLVDARPGERVVDFCAGAGGKTLAIAAQMANKG 304 Query: 272 QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCG--EQQFDRILLDAPCSATG 329 V+A D+ + RL R + +R G+ + +W + FDR+L+DAPCS TG Sbjct: 305 HVIACDVSDGRLKRAAERFRRAGLHNIETRPLASETDRWVKRHKGGFDRVLVDAPCSGTG 364 Query: 330 VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAF 389 RR+PD +W +++ + L LQ+ IL + +K GG LVYATCS+LPEEN Q+ AF Sbjct: 365 TWRRNPDARWRQQEAGLDHLLPLQARILASAARLVKPGGRLVYATCSMLPEENEAQVAAF 424 Query: 390 LQRTADAELCE--------TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 L + TG+ P E DGFF A L + Sbjct: 425 LAAYPAFHVMPVREAAPQLTGSAHPDHLSLTPARHETDGFFAAVLQR 471 >UniRef50_B5YIL4 Sun protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIL4_THEYD Length = 441 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 117/448 (26%), Positives = 206/448 (45%), Gaps = 36/448 (8%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNIL-PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 ++ R +A + + VV + L L + D+A L E+ +GVLR L +DWL+ Sbjct: 4 KSPRKVAVEVLNNVVGTKKPLKFALTENILSMFDKADRAFLLEVIYGVLRNLYYIDWLLE 63 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 T++ + +YQL++ IP +A ETV + ++N +LR Sbjct: 64 DFYKSREKLSMYTINN-LRCAIYQLVFMHIPAYAVANETVNVEKSFNGK--PNVVNAILR 120 Query: 124 QFQRQ---------QEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 F R+ E++ + Y HP WL+ R K + + +++++ANN++PP Sbjct: 121 NFLRKYQADEIFRITEQMQTDNKNLSVVYSHPEWLITRWLKRFQLNEVKALLKANNEKPP 180 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAP-VHALPGFEDGWVTVQD 232 + + + R + G K + +E + + VQD Sbjct: 181 ITIAVKP--EERQMIGEYFTQKGFKVSFSKHVASGLIIEGQGYEIRKTLKESPFFWIVQD 238 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 ++Q L P G ILD CA+PGGKT + + ++ ++ +++RL + +N+ R Sbjct: 239 EASQLVCFLLEPFEGACILDACASPGGKTLLTAALIKKGTIICIENNKKRLENLQENIAR 298 Query: 293 LG----------MKATVKQGDGRYPSQWCG--EQQFDRILLDAPCSATGVIRRHPDIKWL 340 + + A + Q + G +FDRI+LDAPCS+TGVIRR+PD+++ Sbjct: 299 VKKFLPDVEIQPILADICQISLKKHLDSLGFNTHKFDRIILDAPCSSTGVIRRNPDVRYR 358 Query: 341 RRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE 400 +++I L++ Q +L+ + L G LVY+ CS PEE I++FLQ+ + + Sbjct: 359 VNEQEIKRLSKTQKLMLENVSQFLVKNGILVYSVCSTEPEEGEEVIESFLQKHDEFSSIK 418 Query: 401 TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + P + DGFF KL++ Sbjct: 419 K-------LRTYPHIDGMDGFFMGKLLR 439 >UniRef50_B2UP28 Sun protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UP28_AKKM8 Length = 412 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 134/435 (30%), Positives = 199/435 (45%), Gaps = 33/435 (7%) Query: 1 MKKQR-NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQ 57 MK + R A + ++ + + D+ L+Q L F VLR + Sbjct: 1 MKNNPPSPRQTALNCLRSWHAGRSFAETLVDRECSRTALPSADRHLVQALVFSVLRNQTW 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGL 117 LD +I L + ++ +GL QL + HAA+ ETV A +L+GL Sbjct: 61 LDHVIGTLRKGRL---DVEARLILQLGLSQLFLLGMADHAAVYETVNLASV----RLRGL 113 Query: 118 INGVLRQFQRQQEELLAEFN--ASDARYLHPSWLLKRL-QKAYPEQWQSIVEANNQRPPM 174 +N +LR R+++ +L E Y P+WL++R ++ P+ + ++ NN P + Sbjct: 114 VNAILRNALRREKTILEEREKLPLSIHYSTPAWLVRRWTEQMGPQMARDLLRWNNTTPRL 173 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 ++R N + P P +E P L + G + V D S Sbjct: 174 YVRANPLMP--------MKNIPASLAPLDRAPGWFSVEGLLP---LEEIKTGSLYVADPS 222 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 + + LAPQ GE ILD CAAPGGK+ I +A + A D+ E RL + +NL R Sbjct: 223 TRYSIDLLAPQPGEEILDACAAPGGKSAAIIAATGGKAHLTATDLHEHRLPTLKENLDRQ 282 Query: 294 GMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 G Q D P + + +FD +LLD PCS TGVI+R D++W +I L L Sbjct: 283 GSSFVRTAQADWSLPCRTEWKGRFDAVLLDVPCSNTGVIQRRVDVRWRLTPEEIRRLTAL 342 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412 Q IL+ +K GG LVY+TCS+ EE+ L I+ FLQ + L E K L Sbjct: 343 QKTILENASRAVKPGGRLVYSTCSIDAEEDGLLIRDFLQNHPEWTLKEE-------KLIL 395 Query: 413 PGAEEGDGFFYAKLI 427 P E+ DG + A LI Sbjct: 396 PHEEKSDGAYAALLI 410 >UniRef50_A9IZD6 SUN-family protein n=5 Tax=Bartonella RepID=A9IZD6_BART1 Length = 454 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 132/452 (29%), Positives = 207/452 (45%), Gaps = 48/452 (10%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 +R + + + VV++ LS + P K+S +D+ L + + LR Q+ Sbjct: 19 VRQVCVRLLGAVVDRYTPLSGLTDNEHGHPQYLKLSQRDRLLCRAILTTSLRHRGQITAA 78 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLKGLING 120 ++ + RP+ + ++ +L+ + + Q+LY IP HAA+ V A R + G++N Sbjct: 79 LSCFLERPLPSQALSLQHLLHISVAQILYLDIPDHAAIDLAVRVAKFDPRMRRFSGVVNA 138 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 +LR R+ L + + P+W + L AY E+ Q I+E + PP+ L + Sbjct: 139 LLRNVAREAAPLRQQVPTIE---GVPAWFSQLLVSAYGIEKAQQIIELQSVEPPLDLTV- 194 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGC 238 W L G P+ +VRL V LPG+ +G VQD +A Sbjct: 195 --KSDSIGWAERL---GGVVLPNG----SVRLNRLECSVSDLPGYREGAWWVQDFAAALP 245 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L G+ + DLCA+PGGKT + A+V A+++ R+ R+ +N++RL Sbjct: 246 ACLLGELRGKRVADLCASPGGKTAQLA--LQGAEVTAIELSANRVKRLKENMERLYFSVH 303 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + QGD R + Q FD +LLDAPCS+TG IRRHPDI W + D+ +LA LQ ++L Sbjct: 304 IWQGDVRN---FHPTQLFDAVLLDAPCSSTGTIRRHPDILWTKSRDDVIKLAALQYDLLV 360 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK--------- 409 A +K GG +V++ CS+ EE I+ L D L E Sbjct: 361 AAIALVKKGGRIVFSNCSLAREEGEDLIEKILSIRNDIVLDPIYPEEMGALAHLLSEGMV 420 Query: 410 QNLPGAE-------------EGDGFFYAKLIK 428 + P DGFF A+L K Sbjct: 421 RTTPADFCHKNFDAEKTAPLGMDGFFAARLRK 452 >UniRef50_Q0G330 Putative uncharacterized protein n=5 Tax=Rhizobiales RepID=Q0G330_9RHIZ Length = 473 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 136/450 (30%), Positives = 212/450 (47%), Gaps = 41/450 (9%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPP-----LQQKVSDKDKALLQELCFGVLRTLS 56 K R +AA+ + V+EQ SL + P +++ +D+ L++ + LR Sbjct: 40 KPGLKARQVAAKLLGAVIEQQTSLDGLTDPDHGHPHFRQLEARDQGLVKAILLTALRFRG 99 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LK 115 L I + RP+ +++L+ V Q+ + +P AA+ V A A R + K Sbjct: 100 TLTQEIAARLDRPLPSNATALNHLLHVAAAQIRFLDVPDSAAVDLAVTAAEADPRTRRFK 159 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPM 174 G++N VLR+ R EL ++ P+WLL+RL AY E + ++I A+ P+ Sbjct: 160 GVVNAVLRRMTR---ELGGAEVTTEPAIDCPNWLLERLIAAYGEPRAKAIAAAHRMPAPI 216 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE--TPAPVHALPGFEDGWVTVQD 232 L + ++W L + G ++RL+ T + +L GF +G VQD Sbjct: 217 DLTV---KTDPEAWAERLGGQVVSG-------PSIRLDATTQGSIASLDGFAEGKWWVQD 266 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 ASA + G+ DLCAAPGGKT + V +A V A + + R R+ NL R Sbjct: 267 ASAALPVRLFGDLTGKTAADLCAAPGGKTAQL--VLSDATVTACEASKSRAKRLVANLTR 324 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 L A G + G++ FD +LLDAPCS+TG +RRHPD+ + D+ LA++ Sbjct: 325 LAHDAETLIGP---FQETLGDRTFDAVLLDAPCSSTGTLRRHPDVGHTKSLDDVRRLAEV 381 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG---- 408 Q ++LDA H+ GGTLV++ CS+ P E +KAFL D E PG Sbjct: 382 QRKLLDAAANHVAPGGTLVFSNCSIDPIEGEELVKAFLAERKDFTRRPIEPTELPGFDKA 441 Query: 409 ------KQNLPG----AEEGDGFFYAKLIK 428 + P DGF+ ++L + Sbjct: 442 VTSDGDLRTTPEMLSAIGGIDGFYASRLQR 471 >UniRef50_C5A6U4 SAM-dependent tRNA/rRNA cytosine-C5 methylase n=6 Tax=Thermococcus RepID=C5A6U4_THEGJ Length = 451 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 102/449 (22%), Positives = 209/449 (46%), Gaps = 26/449 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDK----ALLQELCFGVLRTLSQLD 59 + + + + A A+ V E+ S + L + +KV+ KD+ L F + + +++D Sbjct: 6 KVSFQEVVADALSLVEERELSSKHALERVFRKVAGKDREKARGLAHAYVFEIEKWRAKID 65 Query: 60 WLINKLMA-RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLI 118 ++IN ++ + + L+ +G +++ + ++PP A + + Sbjct: 66 FIINSVLKGSKVEDLDPYLANLLRIGTFEIHFRKVPPAIATDSIIRVVKERFDFSRAKFV 125 Query: 119 NGVLRQFQR-------QQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 N ++ ++ ++ + R+ HP W ++ + + ++ ++ +NN+ Sbjct: 126 NALMHSIEKFDVERALKRLKERDRIEWLSVRFSHPRWYVEYVIELLGYDEAVRLLLSNNR 185 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 ++R N DS L+E G++ L+ PV L +++G + Sbjct: 186 PQRYYVRANTLKTDMDSLRDYLEENGVRTALTPVPDVLKVLDYKTPVTRLDWYKEGKFVI 245 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 QD ++ L P+ GE +LDL AAPG KT H + + ++VAVD RL R+ + Sbjct: 246 QDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAASLMENKGEIVAVDYSYDRLMRMKEK 305 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 +K LG+K + DG+ + + +FDRI+LDAPCS++G R+ P++KW +R I Sbjct: 306 MKILGIKNVKLVHADGQ---SFRDKAKFDRIILDAPCSSSGTYRQFPEVKWRFDERKIKR 362 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA------DAELCETG 402 + +Q +L + +L+ GG + Y+TCS+ +E+ + +++ D + G Sbjct: 363 IISVQRNMLRNAYENLRDGGVMTYSTCSIRIDEDEENVLFAVEKVGLELLPYDFSWGDRG 422 Query: 403 TPEQPGK--QNLPGAEEGDGFFYAKLIKK 429 E + + + + FF AK+ ++ Sbjct: 423 FLEIGDRVFRAWTHRHDCNSFFIAKMGRQ 451 >UniRef50_Q8TGZ8 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGZ8_METKA Length = 449 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 120/444 (27%), Positives = 208/444 (46%), Gaps = 30/444 (6%) Query: 9 SMAAQAVEQVVEQGQS-LSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 ++AA+++ +V+ + +L + DK +++ + + + VLR L+ ++ + Sbjct: 10 ALAAKSLIEVMRTKSYPIQYVLRKTLSEYDDKTQSVTRSMVYDVLRRYGTLERVVEDVSR 69 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIK--RPQLKGLINGVLRQF 125 + + L+MV ++LY P A + ++ G++ L ++ Sbjct: 70 SELPPLE---RALVMVAANEVLYEGKHPAPVTDSATRAAKELGLNHRRVHGVV-ADLEEY 125 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPM-WLRINRTHH 183 +R + E E + Y HP W +++ E + + ++E +N+ P R+N T Sbjct: 126 ERPEPE--DEIDRLCLEYHHPRWFVEKFGALLDEDELKELMEVHNEPPEYYTFRVNTTAA 183 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPV--HALPGFEDGWVTVQDASAQGCMTW 241 + L +E G + +R++ P+ L + +G + QD +A Sbjct: 184 DVEDVLREFEEHGFEVERGEYVDYCIRVKKGQPLRLEELECWREGHIVPQDEAAALVTEI 243 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT-V 299 L PQ GE I DLCAAPGGKTTHI ++ + A+++AVD+ RL R+ +R+ + V Sbjct: 244 LNPQPGERIADLCAAPGGKTTHIAQLTEDEAEILAVDVSRVRLRRLERFAERMVFENIEV 303 Query: 300 KQGDGRYPSQ-WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + D R + +FDR+LLD PCS+ G +R PD+KW RDI ELA Q +++ Sbjct: 304 LRADVRRLGRNPRYVGKFDRVLLDPPCSSLGTLRSDPDVKWKIGPRDIRELALKQRQLIR 363 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR--------TADAEL------CETGTP 404 A LK GG LVY+TC++ PEEN L + ++R ++ E + + Sbjct: 364 AAARLLKPGGVLVYSTCTITPEENELVVSEAIKRDRLRPVDVRSEFEFLHPPLRVDGVSS 423 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIK 428 + P GFF AKL K Sbjct: 424 SLEAGRMWPHVHGTTGFFVAKLKK 447 >UniRef50_B6W6K6 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W6K6_9FIRM Length = 426 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 107/427 (25%), Positives = 207/427 (48%), Gaps = 13/427 (3%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 + + ++ + + ++I+ + ++VS D + + + +GVL L+++I KL Sbjct: 5 KLILDGLYRICYKNEKSTDIINDIAREVS--DISYITKNIYGVLENKLYLEYIIGKLSKI 62 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 + + V ++ +G+Y + + +A + E V + + K +N VLR + R Sbjct: 63 KIKKLDKKVLLILEIGIYNIHFLDRKNYAIVNELVNLTKKVSY-KSKSFVNAVLRSYIRD 121 Query: 129 QEEL-----LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH 182 +E L + +Y P W++K L ++Y + + + + N++ + +R+N Sbjct: 122 EENLSKIKAKNKDQFQSIKYSIPLWIIKYLNESYGYDYTEKFLNSLNKKRKLSIRVNENK 181 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 ++ LL++ G + ++ ++ P+ + F+ G T+Q ++ L Sbjct: 182 IYKNKLKNLLEDKGYQLAESKISSRSLIVKNPSSLADTEEFKKGLFTIQSEASIKVCEVL 241 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEA-QVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 +P+ ILDLCAAPG KT+ + E+ + ++VA DI +LS++ +N+KRLG+K Sbjct: 242 SPEKNSQILDLCAAPGTKTSFLAELCENSSRIVANDISFNKLSKINENIKRLGLKNIEIT 301 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 + +++FD IL D PCS GV+ R P+I++ R D+ L++LQ ILD + Sbjct: 302 NFDASIVKDEYKEKFDYILCDLPCSGLGVMDRKPEIRYNRTMEDVINLSKLQKNILDRAF 361 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 +LK GG +V++TC++ EN L + + + E +E DGF Sbjct: 362 LYLKKGGIMVFSTCTIGNIENKDNFTY-LSKKKSLKNIKINGEEYLEYNTF--EDETDGF 418 Query: 422 FYAKLIK 428 F K K Sbjct: 419 FLTKFEK 425 >UniRef50_A6UED5 Fmu (Sun) domain protein n=14 Tax=Rhizobiales RepID=A6UED5_SINMW Length = 470 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 133/453 (29%), Positives = 212/453 (46%), Gaps = 45/453 (9%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPP-----LQQKVSDKDKALLQELCFGVLRTLS 56 K R AA+ + VV++ L +L P + ++++D D+AL++ + LR L Sbjct: 34 KPGLKSRQAAAKILAAVVDRKTPLDGMLDPERGNPVYRELNDADRALVRAILNSALRHLP 93 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLK 115 ++ I+ L+ P+ R + +++ V Q+LY +P H+A+ VE A + R + Sbjct: 94 RIRAAIDSLLQTPLPEGARALEHVLTVAAAQILYLDVPDHSAVDLAVEQAQSDPRNRRFA 153 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 L+N VLR+ R++E +L A P W RL Y +Q + I +A + Sbjct: 154 SLVNAVLRRLSREKEAILERLQQVPA---MPGWFFDRLVTCYGRDQAERISDAQLVPAAI 210 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDA 233 + + SW L+ + +VRL+ + +LPGF +G VQDA Sbjct: 211 DVTV---KSDAASWADRLNGTVLPT-------GSVRLQDFDGSIPSLPGFSEGGWWVQDA 260 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 +A +G ++DLCAAPGGKT + V A+V+A+D RL R+ NL+RL Sbjct: 261 AASIPARLFGDISGRKVVDLCAAPGGKTAQL--VLAGAKVIALDQSSSRLRRLKANLERL 318 Query: 294 GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 G+++ K+ D + + E+ FD LLDAPCS+TG RRHPD+ W + D+ +LA LQ Sbjct: 319 GLESATKEAD---MADFRPEELFDAALLDAPCSSTGTTRRHPDVLWTKGPDDVEKLAGLQ 375 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL- 412 +L +K GG LV++ CS+ P E + + E PG + Sbjct: 376 ERLLRHALTLVKPGGLLVFSNCSLDPREGEEVVARVVAD-GGCERVPIDAAAWPGLEQAI 434 Query: 413 -----------------PGAEEGDGFFYAKLIK 428 P A DGF+ A L + Sbjct: 435 TALGEFRTTPAMLSLGPPFASGLDGFYAAVLRR 467 >UniRef50_D1AKD9 Fmu (Sun) domain protein n=4 Tax=Fusobacteriaceae RepID=D1AKD9_SEBTE Length = 437 Score = 346 bits (889), Expect = 7e-94, Method: Composition-based stats. Identities = 109/431 (25%), Positives = 206/431 (47%), Gaps = 24/431 (5%) Query: 14 AVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 +++++ G+ + L + + K+K+ + + L+ L +D+LI Sbjct: 11 LLDEIIAGGKYSNLQLNYYFSTKGYNKKEKSFITNIIHTTLKNLIFIDYLIE---KNASN 67 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPHA-ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE 130 K+R + L+ + + Q L + ++ + E VE A I + Q G +N +LR ++ + Sbjct: 68 IKKRKIKQLLRISVAQFLLNKESDYSGIVFEAVETAKIINKHQ-TGFVNVILRNIFQKYD 126 Query: 131 ELLAEFNAS---DARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 +L++E + +P W++ ++ YPE + I+++ + + RIN SR+ Sbjct: 127 QLVSEIPPTKKYSVELSYPQWIINKIASDYPENYVRILQSYKTKSYLSFRINPRKFSRED 186 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 ++ L AG + V + + + F++ +VQDAS+ + L Q+ Sbjct: 187 FIKL---AGKHESKILFEIENVFYMSNSALLDTKEFKENCFSVQDASSYLAVKALDVQDD 243 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA-TVKQGDGRY 306 + +LD C+APGGK + IL+ VVA DI E ++ + + K+ + D R Sbjct: 244 DIVLDACSAPGGKMSAILQEYNPDLVVASDIHEHKIGMLKEIKKKNNFTNLKIVLNDARE 303 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 + ++FD+ILLD PCS GV+R+ P+ + + DI +L ++Q I D+ + LK Sbjct: 304 IGEL--NEKFDKILLDVPCSGLGVLRKKPEKIYTLENSDIKKLKKIQKAIFDSAYHSLKE 361 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-------EQPGKQNLPGAEEG- 418 G ++Y+TC+ EEN+ IK F ++ D + P ++ G + + Sbjct: 362 NGVIIYSTCTFTREENTNNIKYFTEKYPDLVIENVIFPDNVFISKDEFGGSFIDYRNKYL 421 Query: 419 DGFFYAKLIKK 429 DGF+ AK KK Sbjct: 422 DGFYIAKFRKK 432 >UniRef50_D2MQI4 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI4_9FIRM Length = 404 Score = 346 bits (889), Expect = 7e-94, Method: Composition-based stats. Identities = 110/426 (25%), Positives = 181/426 (42%), Gaps = 35/426 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R + +E V+ S L L+ + S + E+ +G LR L + Sbjct: 4 REAIVRILEHVLYDHAYASLSLKQLKIEGS---IGFVTEVVYGTLRHYKLLQEQYKPFVK 60 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF-- 125 + L+++ LYQ + ++P +A + TVE + Q KG +N VLR+ Sbjct: 61 KIKKKMD----VLLVMALYQHHFMKVPDYAIVNSTVELVKS----QEKGFVNAVLRKIFQ 112 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHS 184 E + RY HP WL++ Y + I+ N + ++ R N Sbjct: 113 SEWIEPMGNNPEDLAIRYSHPEWLIRLWLAQYGLNKTLEILAENQKPSKVYGRYNPFLAK 172 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 ++ G + + + + F + V VQD +Q + L Sbjct: 173 KEEL------TGFTFYENDCVSY------TGNLLSTEAFRNHKVLVQDRHSQMIVPQLDL 220 Query: 245 QNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 + G +LD CA+PG K+ I + + ++++ DI RL + + G K + Sbjct: 221 RRGLKVLDACASPGTKSQQIATYMCNDGEIISCDIYPHRLKLLDQLASQTGTKIIHSELQ 280 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 + +Q FDRILLD PCS G + P+I++ I E+ QLQS+IL+ + Sbjct: 281 DASCFRKDWQQAFDRILLDVPCSGLGDLSHKPEIRYHISPNSIDEIQQLQSKILEVNASY 340 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFY 423 LK G LVY+TC++ +EN QI+ FL + + L + K P DGF+Y Sbjct: 341 LKEEGILVYSTCTLNQKENHKQIQQFLNQYEEFILEKE-------KTFFP-KNGSDGFYY 392 Query: 424 AKLIKK 429 AKL +K Sbjct: 393 AKLRRK 398 >UniRef50_C6R1D5 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R1D5_9MICC Length = 659 Score = 346 bits (889), Expect = 8e-94, Method: Composition-based stats. Identities = 123/507 (24%), Positives = 191/507 (37%), Gaps = 86/507 (16%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLD 59 + R+ + V E + +LP ++ +D EL +G LR D Sbjct: 160 RTADTARATVFDVLRSVAESDAYANLVLPKAIRSHRLDHRDAGFATELTYGTLRHQGTYD 219 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 ++++ + RP+ T ++ +G++QLL R+P HAAL ++V A IN Sbjct: 220 AILSRCVDRPIEKVGTTTLIVLRMGVHQLLNMRVPAHAALNQSVSLAREKIGAGPASFIN 279 Query: 120 GVLRQFQRQQEELLAEFNASDAR---------YLHPSWLLKRLQKAY------PEQWQSI 164 VLR+ + E E DA+ HP W+++ +++A + + + Sbjct: 280 AVLRRVSERTPEEWYELIIEDAKDDTERMALLASHPGWIVRSMRQALVAHGRPASEIEQL 339 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 +EA+N P + L S L+EA +G + + L + L Sbjct: 340 LEADNLAPVVNLVALPGLGS-------LEEAREQGAIDGELVEGSALYASGDLARLESVH 392 Query: 225 DGWVTVQDASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEVA--PEAQVVAVDI 278 +G V QDA +Q LA LDLCA PGGK + + A +VA + Sbjct: 393 EGTVRAQDAGSQLVARALAAAPLDGTDTAWLDLCAGPGGKAALLGALGIQRGASLVANEA 452 Query: 279 DEQRLSRVYDNLKRLGMKA-TVKQGDGR------------YPSQWCGEQQFDRILLDAPC 325 R V +++ L + TV GDGR P Q FDR+++D PC Sbjct: 453 APHRAQLVESSMRPLPEDSYTVLTGDGRQIRETLRKNASDLPGSIEPGQLFDRVMVDVPC 512 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 S G +RR P+ +W + RDI EL LQ ++LDA + GG + Y TCS E Sbjct: 513 SGLGALRRRPEARWRKSPRDIAELLPLQRQLLDAAIEATRPGGVIAYVTCSPHAAETQNI 572 Query: 386 IKAFLQR-----------TADAELCETGTPEQPG-------------------------- 408 + L+ + L G +P Sbjct: 573 VAEVLESGAVSLLDSAAALREVALHTEGANGEPVSVLAGEKDPGHTPEIKVKKGAPVVKA 632 Query: 409 ------KQNLPGAEEGDGFFYAKLIKK 429 Q P D F A L K Sbjct: 633 SENPTTAQLWPHVHGTDAMFLALLRKN 659 >UniRef50_C5SHX2 Sun protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SHX2_9CAUL Length = 464 Score = 346 bits (889), Expect = 9e-94, Method: Composition-based stats. Identities = 139/438 (31%), Positives = 204/438 (46%), Gaps = 35/438 (7%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL-QQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R A VE +E+ K+S+ ++A L VLR L QLD +I Sbjct: 45 ARVAAITLVEAALEKRSGFDEAAASADFLKLSETERAFAGALALLVLRRLGQLDHVI--- 101 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGLINGVLRQ 124 + V L+ +G+ Q+ + ++P AA++ TV+ A + + KGLIN +LR Sbjct: 102 HKKTQKMPPEAVRQLLRIGMAQIFFMQVPDFAAVSTTVKIAERENKTRPFKGLINAILRG 161 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 R + + + + L P WL +R + Y E+ + + + P R Sbjct: 162 LIRDG-----KLSDVNPKRLVPDWLWQRWVQTYGEENAAGMASVLTEEPATDLSFRNPTD 216 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD L + P +R + ++ G VQD +A + L Sbjct: 217 RDGLAEALQGEAVG-------PVNLRSSLRGDLRQWADYDAGKWWVQDIAAATPVNLLGD 269 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 NG+ LD+CAAPGGKT + +A AQ VA+D + RL RV DNLKR+GM A + D Sbjct: 270 LNGKTALDVCAAPGGKTLQL--IAKGAQTVAIDRSKNRLKRVEDNLKRIGMSAEIHNADA 327 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 S + + FD +L+DAPCSATG RR PD+ W R D+ +LA +Q +LDA+ P + Sbjct: 328 ---STFDDPRAFDVVLVDAPCSATGTYRRQPDVLWATRPADVAKLADVQHRLLDALAPRV 384 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP-----------GKQNLP 413 K GG +Y TCS+ EE QI AFL+R D L + + P + LP Sbjct: 385 KPGGDFLYCTCSLEREEGETQILAFLRRNKDFTLVKHTADQHPDIPAASFAPEGWLRLLP 444 Query: 414 GAEEG--DGFFYAKLIKK 429 +G DGFF A L + Sbjct: 445 HQRKGGQDGFFVAHLKRN 462 >UniRef50_A2BK62 tRNA and rRNA cytosine-C5-methylase n=12 Tax=Archaea RepID=A2BK62_HYPBU Length = 472 Score = 346 bits (889), Expect = 9e-94, Method: Composition-based stats. Identities = 111/412 (26%), Positives = 196/412 (47%), Gaps = 32/412 (7%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARP-MTGKQRTVHYLIMVGLYQLLYTRIPPHAA 98 D+ LL + + ++ + LD + +L P + + + + + ++ P Sbjct: 68 DR-LLTSIFYDTMKRMGLLDRVAAELANVPTVLILDPWLRAALRLAV-DIVLFHRPD--- 122 Query: 99 LAETVEGAIAIKRPQLKGLINGVLR------------QFQRQQEELLAEFNASDARYLHP 146 + + R + I+ + + + A + +YL P Sbjct: 123 -----KNTLHRLRWIVADFISAKTHPYVGMFYWQTFDKLLEYRPKPKTVEEALEWKYLLP 177 Query: 147 SWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADY 205 +WL++R++ E+ + + EA N+RP + +R+N + + + L G Sbjct: 178 AWLIRRMRSLLGEEESEKLFEALNKRPLISIRVNTLKTTVEEVVEELKREGKNPIVSTRV 237 Query: 206 PDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL 265 P V+ E P + +G +Q+ ++ L P+ G ++DL AAPGGKT+HI Sbjct: 238 PVIVKFEGPYDFDRSRLYREGKFVIQEEASAAASIILDPKPGMTVVDLAAAPGGKTSHIA 297 Query: 266 EVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDA 323 E+ ++ A DID R+ R+ L+R+G+ + + D R + GE+ DR+LLDA Sbjct: 298 ELMKNHGRIYAFDIDRVRIKRMRMILRRMGITIVRIFEKDAREAPRILGEEIADRVLLDA 357 Query: 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 PC++TG I ++P+++W R+ + E+ +LQ E+L+A +K GG L+Y TCS+LPEEN Sbjct: 358 PCTSTGTIAKNPELRWRVREEGLEEIVKLQREMLEAAAKLVKPGGRLLYTTCSLLPEENE 417 Query: 384 LQIKAFLQRTADAELCETGTPEQPG------KQNLPGAEEGDGFFYAKLIKK 429 IK FL+R ++ +L P P + P + GFFYA L KK Sbjct: 418 DNIKWFLKRHSEFKLVPLNGPYDPSPLLHGTMRAWPHRHDTIGFFYALLEKK 469 >UniRef50_D2NSI1 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Micrococcaceae RepID=D2NSI1_9MICC Length = 697 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 122/507 (24%), Positives = 188/507 (37%), Gaps = 86/507 (16%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLD 59 + R+ + + V E + +LP ++ +D EL +G LR D Sbjct: 198 RTADTARATVFEVLRSVAESDAYANLVLPKAIRSHRLDHRDAGFATELTYGTLRHQGTYD 257 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 ++ + RP+ T ++ +G++QLL R+P HAAL ++V A IN Sbjct: 258 AILRHCVDRPLEKVGTTTLIVLRMGVHQLLNMRVPAHAALNQSVSLAREKIGAGPASFIN 317 Query: 120 GVLRQFQRQQEELLAEFNASDAR---------YLHPSWLLKRLQKAY------PEQWQSI 164 VLR+ + E E DA+ HP+W+++ +++A + + + Sbjct: 318 AVLRRVSERTPEEWYELIIKDAKDDTERMALLASHPAWIVRSMRQALVAHGRPASEIEQL 377 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 +EA+N P + L S D G + + L T + L Sbjct: 378 LEADNLAPVVNLVALPGLGSLDEAREQ-------GAVDGELVEGSALYTSGDLARLESVR 430 Query: 225 DGWVTVQDASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEVA--PEAQVVAVDI 278 +G V QDA +Q LA LDLCA PGGK + + A +VA + Sbjct: 431 EGTVRAQDAGSQLVARALAAAPLDGTDTAWLDLCAGPGGKAALLGALGIQRGASLVANEA 490 Query: 279 DEQRLSRVYDNLKRLGMKA-TVKQGDGR------------YPSQWCGEQQFDRILLDAPC 325 R V +++ L + TV GDGR P Q FDR+++D PC Sbjct: 491 APHRAQLVESSMRPLPEDSYTVLTGDGRQIRETLRKNASDLPESIEPGQLFDRVMVDVPC 550 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 S G +RR P+ +W + RDI EL LQ ++LDA + GG + Y TCS E Sbjct: 551 SGLGALRRRPEARWRKSPRDIAELLPLQRQLLDAAIEATRPGGVIAYVTCSPHAAETQNI 610 Query: 386 IKAFLQR-----------TADAELCETGTPEQPG-------------------------- 408 + L+ + L G +P Sbjct: 611 VAEVLESGAVSLLDSAAALREVALHTEGANGEPVSVLAGEKDPGHTPEIKVKKGAPVVKA 670 Query: 409 ------KQNLPGAEEGDGFFYAKLIKK 429 Q P D F A L K Sbjct: 671 SENPTTAQLWPHVHGTDAMFLALLRKN 697 >UniRef50_Q8TGY2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGY2_METKA Length = 431 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 110/427 (25%), Positives = 196/427 (45%), Gaps = 20/427 (4%) Query: 19 VEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA-RPMTGKQRTV 77 E+G SL L + + + +Q L ++R L +D ++N+++ + + Sbjct: 2 EERGHSLKAALRNALRGIGGRRHRFVQALAHELVRVLGNVDLVLNRVLRGSTVEDLHPYL 61 Query: 78 HYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR-QQEELLAEF 136 + VG +++ + R P V+ P+ N +LRQ +R EE+++ Sbjct: 62 RNALRVGTWEIHWRREHPGPVTKAVVDVVKERVGPKHARFANAILRQVERVNPEEVISSI 121 Query: 137 NASDAR----YLHPSWLLKRLQKAYP--EQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 AR Y P W ++ ++ A+ ++ + +EA N+RP ++R+N + + Sbjct: 122 RDPTARFAARYNFPKWYVELVRSAFDSMDELRKFLEACNRRPARYVRVNTLVSDPEEVVR 181 Query: 191 LLDEAGMKGFPHADYPDAVRLETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEH 249 L G++ D PD +R+ + PV P F+ G V Q ++ P+ G Sbjct: 182 RLKRRGIEAERDPDVPDVLRIRSAETPVIKTPEFKKGEVYPQTKASAAVAHAAEPEPGMT 241 Query: 250 ILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATV--KQGDGRY 306 ++DLCAAPGGKTTH+ ++ +++A+D+ +R + +++ V D R Sbjct: 242 VVDLCAAPGGKTTHLAQLMEGRGEIIAIDMHPKRFGTLKKRVRQFHADDIVETLCMDARD 301 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR-RDRDIPELAQLQSEILDAIWPHLK 365 GE D +L+D PC+ TG + P+ +W R + + AQLQ E+L LK Sbjct: 302 APDQLGEGIADLVLVDPPCTGTGSVYSKPEKRWDRETTGEPTKWAQLQWELLKVAVRLLK 361 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-------GTPEQPGKQNLPGAEEG 418 GG +VY+TCS+ EN I+ ++R EL + G ++ P + Sbjct: 362 PGGRIVYSTCSITLTENERLIERLVRRYRGLELVDVPLEWASPGVRMPEARRIWPHRHDT 421 Query: 419 DGFFYAK 425 DGFF A+ Sbjct: 422 DGFFVAR 428 >UniRef50_A4T0M4 Sun protein n=2 Tax=Polynucleobacter necessarius RepID=A4T0M4_POLSQ Length = 438 Score = 345 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 160/436 (36%), Positives = 230/436 (52%), Gaps = 33/436 (7%) Query: 10 MAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARP 69 +AAQA+ +V+ G+SL+ +L ++ ++ ++Q L F LR + LI + + Sbjct: 18 IAAQAISEVM-SGRSLTEVLD----ELDAHERPIVQSLTFDALRKWVRSHELIKQFV--- 69 Query: 70 MTGKQRTVHYLIMVGLYQLLYTRIPP-----HAALAETVEGAIAIKRP-QLKGLINGVLR 123 V +L+ V + + H + + V + KGL+N VLR Sbjct: 70 PKTPPPEVDHLLSVAIALFIRNDADDKGYAVHTVVDQAVRACGEYDQTLYAKGLVNAVLR 129 Query: 124 QFQRQQEELLAE--FNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 + + + + + P W L++ Y + WQ+I+ A +R P+ LR+N+ Sbjct: 130 KVSLALQPVADKPFYPPDPIAMFVPPWWRASLKRNYSKDWQAILFAQAKRAPLILRVNQK 189 Query: 182 HHSRDSWLALLDEAGMKGFP-----HADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 +SRD + ALL E+G++ P P A+ L PV LPGF G V+VQDA AQ Sbjct: 190 QYSRDEYRALLTESGIQSKPINAIAGISLPSALLLPDAVPVSDLPGFYSGAVSVQDAGAQ 249 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM- 295 T L PQ E ILD CAAPGGKT H+LE+A + Q+ A+++D +RL ++ NL RL + Sbjct: 250 LAATLLNPQADELILDACAAPGGKTAHLLELA-DCQMRALELDGKRLGKIGGNLDRLRLH 308 Query: 296 --KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 KA V +GD S W FD+IL+DAPCSA+G++ RHPDI +LRR+ DIP L Q Q Sbjct: 309 SEKAKVLRGDASK-SAWWDGVPFDKILIDAPCSASGIVARHPDIPFLRRESDIPVLQQRQ 367 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLP 413 EIL W LK+GG L+Y TCSV PEE Q F Q ++A + PG Q LP Sbjct: 368 REILTQAWKMLKSGGILLYVTCSVFPEEGEDQAVWFAQEHSNALRLDA-----PG-QLLP 421 Query: 414 GAEEGDGFFYAKLIKK 429 DGF+YA K Sbjct: 422 TDAN-DGFYYALFKKN 436 >UniRef50_C2BWI2 Ribosomal RNA small subunit methyltransferase B n=3 Tax=Mobiluncus RepID=C2BWI2_9ACTO Length = 523 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 110/464 (23%), Positives = 188/464 (40%), Gaps = 37/464 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLD 59 ++ R +A QA+ +V + + +LP L + ++ +D A EL +G LR + D Sbjct: 41 TRRDPARDVAFQALRRVDQDHAYANLVLPGLIERARLHRRDAAFATELVYGTLRLQGRYD 100 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I L R + + ++ +G++Q+L R+ +AA+ V+ A G++N Sbjct: 101 AIIGLLSDRDIAALDSELVTVLRMGIHQILQMRVEDYAAVDTMVDLARDRLSAGPAGMVN 160 Query: 120 GVLRQFQRQQEELLAE--------FNASDARYLHPSWLLKRLQKAY------PEQWQSIV 165 VLR+ + A + +P W++ L+ A + ++ Sbjct: 161 AVLRKVTEHDLSYWLDAITSGLTGEKALSRAFSYPEWIVWALRDALVATGRDAGELPGLL 220 Query: 166 EANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFED 225 A N+ + L S D + + D + + L E Sbjct: 221 HAQNRPAYVTLCARPGLISADELATAAETYLDADTRLGELSDCAVVLSGGDPRRLRAVER 280 Query: 226 GWVTVQDASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEVA--PEAQVVAVDID 279 G V+D +Q LA +DLCA PGGKT + +A + V+A ++ Sbjct: 281 GLAGVEDEGSQLVAKVLAAAPVTGVERTWVDLCAGPGGKTALLAGLARSRDVSVIANEVS 340 Query: 280 EQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIK 338 R V D+ K + V QGDGR + DR+L+DAPCS G +RR P+ + Sbjct: 341 PHRAELVRDSTKAFTDQIVQVLQGDGRDFG-GLHPGKADRVLVDAPCSGLGSLRRRPEAR 399 Query: 339 WLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL 398 W + D+ +L LQ ++L + +K GG + YATCS E ++ ++ AD + Sbjct: 400 WNKSATDLKDLTALQQDLLRSALETVKPGGVVGYATCSPHLAETRQVVETTVKNRADLRV 459 Query: 399 CET-------------GTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + P Q P + D F A + KK Sbjct: 460 LDAPAVAREIIVNSEHDLGPGPYLQLWPDRDGTDAMFLALIQKK 503 >UniRef50_B6IQ69 tRNA and rRNA cytosine-C5-methylase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IQ69_RHOCS Length = 456 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 119/448 (26%), Positives = 190/448 (42%), Gaps = 52/448 (11%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINKL 65 A + ++ + ++ + + KD+ + L + VLR +L W +++ Sbjct: 8 QAAIDLLSEIEATPRPADALVSQFFRNRRYIGAKDRQGVAGLVYSVLRHRGRLGWWLDRC 67 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL--- 122 T L++ AE V + + GL NG Sbjct: 68 ------NVMPTPRALLL-----------------AEAV-LVQGRRADSVSGLFNGAKFGP 103 Query: 123 -------RQFQR--QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPP 173 R+ + + P W L+ A+ +++ + + A P Sbjct: 104 EPLNDSERRLLKAVDTHTIDHPKQPEALALEVPEWAEAPLRAAFGDRFHAEMAAMLGEAP 163 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 + LR N +R+ A L EAG+ P P +R++ APV ALP F +G +QD Sbjct: 164 LDLRANPLKAAREQVQAALAEAGVTAAPTGLSPLGLRVQGRAPVSALPAFREGLFEIQDE 223 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKR 292 +Q P+ G ++D CA GGKT I + + +VVA D+ E RL+R + +R Sbjct: 224 GSQLVALLADPRPGMQVVDFCAGAGGKTLAIAAMMDNKGRVVASDVLEGRLTRAKERFRR 283 Query: 293 LGMKATVKQGDGRYPSQWCG--EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 G+ + W + +FDR+++DAPCS TG RR+PD +W + EL Sbjct: 284 AGLHNIETRALSSERDPWVKRHKGKFDRVVVDAPCSGTGTWRRNPDSRWRPLGPGLAELL 343 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT--PEQPG 408 LQ+ ILD+ ++ GG LVYATCS+LPEEN Q++AFL L PE G Sbjct: 344 PLQAAILDSAARLVRPGGRLVYATCSLLPEENERQVEAFLANHPAFRLLPVAEAWPENLG 403 Query: 409 --------KQNLPGAEEGDGFFYAKLIK 428 + P + DGFF A +++ Sbjct: 404 AAPVTGDTLRLTPARHDTDGFFAAVMVR 431 >UniRef50_B9JUI9 Sun protein n=44 Tax=Rhizobiales RepID=B9JUI9_AGRVS Length = 493 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 125/459 (27%), Positives = 209/459 (45%), Gaps = 47/459 (10%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLS 56 K R A++ + V+++ SL ++ P +S+ D+ L++ + LR L Sbjct: 49 KPGLEARMAASRLLAAVIDRKTSLDGMMDGDHGNPAYAALSEADRGLVRAILNTSLRFLP 108 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LK 115 +++ ++ +L+ P+ R +++ ++V Q++Y +P H+A+ VE A R + Sbjct: 109 RIEAMLARLLDAPLPDGARALYHSLIVAAAQMVYLDVPDHSAVDLAVEQANRDPRSRRFA 168 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPM 174 L+N VLR+ R+++ LLA+ P W +RL Y E+ + I +A + Sbjct: 169 KLVNAVLRRLGREKQALLADVEDV---ICMPDWFFERLIAVYGEEEARRIAQAQLTPAAI 225 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDA 233 L + W L+ + ++RL + V ALPGFE+G VQDA Sbjct: 226 DLTV---KADPAVWAEKLNGVVLPT-------GSIRLASFAGAVSALPGFEEGAWWVQDA 275 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 +A + G+ +DLCAAPGGKT + AV+ RL R+ NL+RL Sbjct: 276 AAALPVRMFGSLEGKRAVDLCAAPGGKTAQLAAAGAVVT--AVEQSANRLKRLNGNLQRL 333 Query: 294 GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 G A + D + FD +LLDAPCS+TG RRHPD+ + + +DI +LA +Q Sbjct: 334 GFSAQLVHQDLMEFNLGEDHPGFDAVLLDAPCSSTGTTRRHPDVFYTKGPQDIVKLAGVQ 393 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQN-- 411 +L L GG++V++ CS+ P+E + L + E + PG ++ Sbjct: 394 ERLLRHAVTLLAPGGSIVFSNCSLDPQEGEDVVARVLADHPELERVAMQVADWPGLEDAI 453 Query: 412 ------------LP----------GAEEGDGFFYAKLIK 428 LP A DGF+ +L + Sbjct: 454 TPLGEFRTTPAMLPGPAMLPGGDSHAGGLDGFYACRLRR 492 >UniRef50_Q2RN41 tRNA and rRNA cytosine-C5-methylase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RN41_RHORT Length = 438 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 206/435 (47%), Gaps = 32/435 (7%) Query: 12 AQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 + V++ G+ L ++ +K+ +D+A + L LR + +L+ +I + RP+ Sbjct: 13 LDLLSAVLDHGRPLDDVFDAATRKLEPRDRAFARLLAATTLRRMGRLEKVIKTFLDRPLP 72 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEE 131 + +++ +G Q+L+ PPHAA+A +V+ A + GLIN VLR+ Sbjct: 73 RRAVGAKHILRLGAAQMLFLDTPPHAAVATSVDVARVRRLAPYAGLINAVLRKVADHGAA 132 Query: 132 LLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 LA F+ D P WL + AY E + EA + P+ L + Sbjct: 133 RLAGFD--DPLADLPRWLGQSWIAAYGAETAARLAEACGREAPLDLT--PRDGDGGALAE 188 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA-PQNGEH 249 L+ + G +VRL T V L GF +G VQDA+A + P G Sbjct: 189 LVGGLALPG-------GSVRLPTATAVRELAGFTEGQWWVQDAAAALPVLLAGVPLKGAR 241 Query: 250 ILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYP 307 ++D CAAPGGKT + AQV AVD RL+R+ +NL+R G+ V +GD Sbjct: 242 VVDFCAAPGGKTLQLAAAG--AQVWAVDRSATRLARLRENLERTGLGDAVNVVEGDA-LT 298 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 QQ D +L+DAPC+ATG RRHPD WL+R D LA LQ +LDA ++ G Sbjct: 299 FTLTDGQQADVVLVDAPCTATGTFRRHPDAPWLKRPGDAAALAALQDSLLDAAVRLVRPG 358 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE----------QPGKQNLPGAEE 417 G +VY CS+ PEE + +I+A L R+ + E + + P + Sbjct: 359 GVIVYCVCSLQPEEAAPRIEALLARSPEISRKPITAGEGGVSDEMITAEGDVRLFPFHLD 418 Query: 418 G----DGFFYAKLIK 428 DGFF A+L++ Sbjct: 419 AVGGLDGFFIARLVR 433 >UniRef50_C1F543 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F543_ACIC5 Length = 440 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 131/448 (29%), Positives = 199/448 (44%), Gaps = 40/448 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQ-QKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R +A ++++ +L ++ ++ +D+ L+ L G LR LD ++ + Sbjct: 5 ARRVAFDLLQRMATSDAHSDELLRTMKVNALAAQDRNLVTTLVLGTLRWQPALDQILLQF 64 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + RP V + +G +QLL+ R+PPHA L ++VE GL+N VLR+ Sbjct: 65 LTRPDQRLSEPVRAALRLGAFQLLHLDRVPPHAVLNDSVELVKLSNEAYATGLVNAVLRK 124 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHH 183 + A+ +L R ++ + E Q+I E + Q P+ LR+ + Sbjct: 125 VMHMPRGAGMDAAAAHPAWL-----AARWRRHFGAEAAQAICEYDQQASPVALRVQSANP 179 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 L G++ P DA R+ V F +G V VQD +Q A Sbjct: 180 -----AEELTGEGVECAPGEWLNDACRVL-RGDVARTQAFAEGRVRVQDEGSQLVAELAA 233 Query: 244 PQNGE--HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 E +LD CAAPGGKT + E EA++VA++I E+R ++ NLK + Sbjct: 234 AAMPEAKRVLDACAAPGGKTAVLAERLAEARIVALEISERRREQMKRNLKAYEGRVECVA 293 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 GD S E ++D IL DAPCS TG + R+P+I+ D+ Q IL + Sbjct: 294 GDA---SALPAEPEYDLILCDAPCSGTGTMARNPEIRLRVYPEDLTRQQARQVAILRGVA 350 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQR--------TADAE-LCETGTPEQPGK--- 409 LK GG +VYATCS+ PEEN ++A R T E L G + G+ Sbjct: 351 GALKPGGRVVYATCSLEPEENEDVVRAVAARVGLRVVEMTPLVEQLAARGVLTERGRENV 410 Query: 410 ---------QNLPGAEEGDGFFYAKLIK 428 + LPG DGFF A L + Sbjct: 411 LAAITNDQLRTLPGVHPCDGFFAAVLER 438 >UniRef50_B4RCX9 rRNA methyltransferase RsmB n=8 Tax=Alphaproteobacteria RepID=B4RCX9_PHEZH Length = 598 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 139/388 (35%), Positives = 193/388 (49%), Gaps = 34/388 (8%) Query: 54 TLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ 113 L +D + + +P + + ++ +G QLL + P HAA++ TV+ A + K Q Sbjct: 231 HLGPIDAALQARLRKPPPDR---IVQVLRLGAAQLLVLKTPAHAAVSATVDLAASQKGGQ 287 Query: 114 L-KGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRP 172 KGL+N VLR R+ +L SD L P WL R + A+ + + A Sbjct: 288 AFKGLVNAVLRGLSREPPDL------SDPDLLAPQWLAARWRAAFGPEAARAMAAMVADE 341 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P + ++ +L+ + G +VR V A PGF +G VQD Sbjct: 342 PATDVTPKDSADAEALGQMLEGRVLPG-------GSVRAGLKGEVQAWPGFAEGRWWVQD 394 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 ASA LA + E LDLCAAPGGKT + A+V AVD RL RV +NL R Sbjct: 395 ASAAIPARLLAVKADETALDLCAAPGGKTLQLAAAG--ARVTAVDKAAGRLKRVSENLAR 452 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 G+ A V Q D ++W ++FD +LLDAPCSATG RRHPD+ W+ DIP+LA L Sbjct: 453 TGLSAEVVQADA---AEWPDRRRFDAVLLDAPCSATGTYRRHPDVLWVASPADIPKLATL 509 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA--ELCETGTPEQPG-- 408 Q+ +LDA +K GG LVY CS+ PEE Q++AFL+R+ + E E G P Sbjct: 510 QARLLDAAARRVKAGGRLVYCVCSLEPEEGEAQVEAFLKRSPEFAPEPVEPGEGGAPEAS 569 Query: 409 ------KQNLPG--AEEGDGFFYAKLIK 428 + LP DGFF A+L + Sbjct: 570 RLPNGTLRILPHHLDGGTDGFFIARLRR 597 >UniRef50_C9RK88 Fmu (Sun) domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RK88_FIBSS Length = 419 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 122/438 (27%), Positives = 189/438 (43%), Gaps = 39/438 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R A + + G + +S EL GV R L++ + L Sbjct: 5 REEAFRVLLLWQRDGSFIKE------SGLSP----FAMELALGVCRRHLYLEYFVKSLTK 54 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIK-RPQLKGLINGVLRQFQ 126 + ++ +GL+Q+ + +P +AA+ ++VE A + L+N VLR + Sbjct: 55 K---LPSLEARVILEMGLFQMFFMDVPDYAAINDSVELAKSANLGESTARLVNAVLRTAR 111 Query: 127 RQQEELLAE--FNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHH 183 RQ E L P WL++R Y ++ +++ +A +RP W+R+N Sbjct: 112 RQGEPALPPQRVRRVSVENSVPEWLVRRWFDVYGGDRAEALAKATLERPTEWIRVNLQKT 171 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH---ALPGFEDGWVTVQDASAQGCMT 240 S + G+ G Y + + V ALP F G + Q+ SA + Sbjct: 172 SAPVLAEKI---GITG-ASILYDRFIEIPRDVGVKLLLALPEFVKGQFSFQNPSAFEVVK 227 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 L + G + D CAAPGGKT + E+ +++A D RL ++ D + RLG+ Sbjct: 228 LLDLKPGLKVWDACAAPGGKTALMAEMDSSLEILASDSSASRLEKMQDLMNRLGLTNIKT 287 Query: 301 QGDGRYPSQ--------WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + P+ E +FDRILLD PCS GVI R P+ + I E+A+L Sbjct: 288 EVIDLAPASATSPQQSTLSSEAKFDRILLDVPCSNMGVIARRPESVYRMTPESINEVAEL 347 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412 Q +IL+ L GG LVYATCS P E + I F++ + + G P PG ++ Sbjct: 348 QFKILENASTALAPGGRLVYATCSPDPTETTRVIARFVKVHPEF--VKVGEPVLPGLKD- 404 Query: 413 PGAEEGDGFFYAKLI-KK 429 DGFF L KK Sbjct: 405 ---SRLDGFFAQALEYKK 419 >UniRef50_A6GKY6 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GKY6_9BURK Length = 455 Score = 339 bits (871), Expect = 9e-92, Method: Composition-based stats. Identities = 150/433 (34%), Positives = 231/433 (53%), Gaps = 25/433 (5%) Query: 14 AVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTG 72 + +V+ +G+SL L + V + + +Q+L + +R L + ++ +L++ Sbjct: 26 VMTRVLREGRSLDQALAAETKGVKTPQALGAIQDLAYFGMRNLGRGQ-VLTRLISGKTLL 84 Query: 73 KQRTVHYLIMVGLYQLLYT----RIPPHAALAETVEGAI-AIKRPQLKGLINGVLRQFQR 127 ++ L+ +G + LL+ + P H + + V + + + KGL N LR F R Sbjct: 85 NPEPLNELMALG-FGLLWDDKNPKYPAHTVVDQMVYACTGSEQFARAKGLANACLRNFLR 143 Query: 128 QQEELLAE-FNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 + A++ P+W +++L+ ++P+ W++++ PP+ +R+N S Sbjct: 144 DSNTWRNKAMEDPLAQHNLPAWWIEKLKASHPQHWETMLAQAQSHPPLVVRVNTRSSSAS 203 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 ++ L+ AGM+ + AV L P PV ALPGF+ G V+VQD++AQ L PQN Sbjct: 204 AYAEQLNAAGMQASVIGE--QAVLLAKPVPVSALPGFDLGQVSVQDSAAQLASQLLNPQN 261 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR--------LGMKAT 298 G+ ILD CAAPGGKT H+LE+A + ++VA+D QRL RV DN++R ++ Sbjct: 262 GQRILDACAAPGGKTGHLLELA-DIELVALDSSPQRLGRVEDNIRRIAPTLNGQWDLRLK 320 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 V Q + W FD IL D PC+ +GV+RRHPDI WLRR DI +L+Q+Q +IL+ Sbjct: 321 VAQAE--LLDTWWDGVPFDGILADVPCTGSGVVRRHPDIPWLRRPDDIAKLSQIQHKILN 378 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAE-- 416 A+W LK GGTL+ TCS+ PEE L KAFL +DA P P Sbjct: 379 ALWSTLKPGGTLLLVTCSIFPEEGPLLAKAFLDNHSDALAQNAPGWVLPVAPANPDQGFD 438 Query: 417 -EGDGFFYAKLIK 428 DGFFYAK K Sbjct: 439 ASPDGFFYAKFEK 451 >UniRef50_A1WK57 Sun protein n=17 Tax=cellular organisms RepID=A1WK57_VEREI Length = 470 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 168/440 (38%), Positives = 231/440 (52%), Gaps = 31/440 (7%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 A Q + GQS + +L + + + +Q L F VLR + + L +L AR Sbjct: 37 AVAVALQAIRSGQSGTAVLAAVDADL----RPGVQALLFQVLRQAGRAELLRRQLAAR-- 90 Query: 71 TGKQRTVHYLIMVGLYQLLYTRIPPHAA---LAETVEGAIAIKRPQL-KGLINGVLRQFQ 126 V L+ V L P+A + + VE A + IN LR+F Sbjct: 91 -TPPPAVDALLCVALALCWNPEDAPYAPFTLVNQAVEAAKHSAAARAQSAFINACLRRFL 149 Query: 127 RQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R++E LLA + AR+ HP W +++L++ +P WQ I++ANN+ PM LR+N+ S Sbjct: 150 REREALLAATDDDPLARWNHPRWWIRQLRQDHPRHWQQILQANNRHAPMVLRVNQRKCSL 209 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL--- 242 +L LD M+ AD + L P PV ALPGF GWV+VQDA+AQ L Sbjct: 210 AQYLRALDAIDMQATVVADM--GLALRQPVPVQALPGFAQGWVSVQDAAAQKAAPLLLQG 267 Query: 243 -APQNGEHILDLCAAPGGKTTHILEVAP---EAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 + +LD CAAPGGKT H+LE+A QV A++ID R +R+ +L+RLG+ A Sbjct: 268 LDLRQPLRVLDACAAPGGKTAHLLELAGADAPLQVTALEIDATRSARIDASLQRLGLGAQ 327 Query: 299 VKQGDGRYPSQWC----GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 V D P W G FD ILLDAPCSA+G++RRHPD++WLRR DI LA LQ+ Sbjct: 328 VLVADATRPQDWWQPHCGGAPFDAILLDAPCSASGIVRRHPDVRWLRRATDIAPLAALQA 387 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPG 414 +L A+WP L+ GG L+Y +CSV E ++AFL DA L + PG + G Sbjct: 388 RLLRALWPLLRPGGRLLYCSCSVFRAEGDAPVQAFLAHHTDARLLPSPGHLLPGNADKDG 447 Query: 415 AE------EGDGFFYAKLIK 428 A + DGFFYA L K Sbjct: 448 AVPDNAGGDHDGFFYALLHK 467 >UniRef50_P46087 Putative ribosomal RNA methyltransferase NOP2 n=28 Tax=Euteleostomi RepID=NOP2_HUMAN Length = 812 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 109/342 (31%), Positives = 158/342 (46%), Gaps = 36/342 (10%) Query: 120 GVLRQFQRQQEELLAEFN-------ASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 G+LR F Q+EE + Y + +LL +L +P + +EAN Sbjct: 248 GILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVP 307 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYP--DAVRLETPAPVHALPGFEDGWVT 229 P+ LR N R L G+ P + V ++ P+ A P + G Sbjct: 308 RPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYM 367 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYD 288 +Q AS+ + LAPQ E ILD+C APGGKT+++ ++ ++A D + +RL V Sbjct: 368 LQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVG 427 Query: 289 NLKRLGMKATVK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 NL RLG+ T+ DGR + G FDR+LLDAPCS TGVI + P +K + ++DI Sbjct: 428 NLHRLGVTNTIISHYDGRQFPKVVGG--FDRVLLDAPCSGTGVISKDPAVKTNKDEKDIL 485 Query: 348 ELAQLQSEILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT 403 A LQ E+L + + KTGG LVY TCS+ EEN + L++ + L TG Sbjct: 486 RCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR-NVRLVPTGL 544 Query: 404 PE-----------------QPGKQNLPGAEEGDGFFYAKLIK 428 + ++ P DGFF AK K Sbjct: 545 DFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKK 586 >UniRef50_A6LN58 NusB/RsmB/TIM44 n=2 Tax=Thermosipho RepID=A6LN58_THEM4 Length = 416 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 116/429 (27%), Positives = 202/429 (47%), Gaps = 32/429 (7%) Query: 10 MAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARP 69 +A + + + G + V +KA + L FGVLR LDW+IN L+ + Sbjct: 7 IAYRLLRKKFRSGIFSTE-FYQAFSYVE--EKAFFKNLIFGVLRKQEYLDWVINSLLKK- 62 Query: 70 MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ 129 ++ ++ +G YQLL+T P ++ + ETVE KGL+N +LR+ + Sbjct: 63 -KDIPPSIRTILRIGTYQLLFTNKPSYSIVNETVELVEK---KSFKGLVNAILRKISKIG 118 Query: 130 EELLAEFNASDARYLHPSWLLKRLQKAYPEQWQ-SIVEANNQRPPMWLRINRTHHSRDSW 188 E +Y HP WL++ +K P + I+E N R+N+ RD Sbjct: 119 ---YTEPKELYLKYSHPKWLIEYWKKFLPLDYIYKILEYNQYPLKTTARVNKRKIDRDK- 174 Query: 189 LALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 L + FP P + E L + +G++T Q S+Q + + Sbjct: 175 ---LKIENI--FPTPHSPVGIYFEKIEENPWKLDKYINGYITYQSESSQIIPLLVDFEKD 229 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRY 306 E + D CAAPGGK THILE+ + +V D+++Q++ + + KRL ++ + D + Sbjct: 230 ELVFDACAAPGGKATHILELC-DVNLVINDVEKQKIKILENQFKRLNLRPKKILNFDAQ- 287 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 + + +FD+I +DAPCS+ G+ RR+P++ ++ + +L+++Q I+ +W +LK Sbjct: 288 --KITLKDKFDKIFIDAPCSSLGIARRNPEVLRRQKKENFKKLSEIQINIISNLWKYLKK 345 Query: 367 GGTLVYATCSVLPEENSLQIKAF--LQRTADA--ELCETGTP---EQPGKQNLPGAEEGD 419 G ++Y+TC+V EEN+ +K + D L + G + G P Sbjct: 346 HGIMIYSTCTVTIEENTNTVKKWKPFAEFVDIRERLEKFGIKYVWDGYGTLFYPDEILTP 405 Query: 420 GFFYAKLIK 428 F+ + L K Sbjct: 406 -FYVSILRK 413 >UniRef50_C6XFI6 Fmu (Sun) domain protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFI6_LIBAP Length = 445 Score = 336 bits (863), Expect = 9e-91, Method: Composition-based stats. Identities = 122/458 (26%), Positives = 216/458 (47%), Gaps = 48/458 (10%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTL 55 MK N R +++ + V+ + SL+ +L + +S +D+ L++ + LR L Sbjct: 1 MKSGMNARLVSSHLLSCVMRKRISLTCLLDLEYGDSAFRLLSQRDQILVRAIVNVTLRFL 60 Query: 56 SQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-L 114 ++D +++ ++ + K+ ++ L+ V + Q+LY + +A + VE A K + Sbjct: 61 PRIDAVLDFVLISSLPRKKYSLQQLLRVSVAQILYLDVADYAVVDLAVEQAKRDKENRHF 120 Query: 115 KGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 L+N +LR+ R++ ELL P W +RL+ Y E+ +I +A Sbjct: 121 AKLVNSILRRVSREKIELLQRIAGISI---IPEWFKERLENFYGKERVLAISDACISPLY 177 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQD 232 + L + ++W L+ + +RL+ P + +LPGF +G VQD Sbjct: 178 IDLTV---KFDIETWAHKLNAVMLPT-------GGIRLKELPESIVSLPGFAEGVWWVQD 227 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 ASA + N +LDLCAAPGGKT + + A+V A+D+ ++RL ++ NL R Sbjct: 228 ASASIPVQLFGTLNNLSVLDLCAAPGGKTAQL--IVSGAKVTALDVSKRRLEKLRCNLDR 285 Query: 293 LGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 L + A + + D +C ++ FD +L+DAPCS+TG IRRHPD+ W R DI + A Sbjct: 286 LHLYAEDIIEMDA---FDYCPKKLFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSAC 342 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA-DAELCET--------- 401 Q ++L +K GG +V++ CS+ +++ ++ L+ + EL Sbjct: 343 FQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKVLRSSPIPVELVPLNSAYWKSID 402 Query: 402 ---GTPEQPGKQNLPG--------AEEGDGFFYAKLIK 428 + + P + DGFF L + Sbjct: 403 MAMALSPEGWIRITPDMLEKIDGVSSGMDGFFAVALRR 440 >UniRef50_C1TRU2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRU2_9BACT Length = 479 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 118/435 (27%), Positives = 192/435 (44%), Gaps = 24/435 (5%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 AA V + V +G+ S L + +VS+KD+ L L + ++R S ++ + + Sbjct: 46 AALEVWREVRRGRFASESLRAISDRVSEKDRPLAATLVYSLIRRESLWKEIVGRFLKTGS 105 Query: 71 TGKQRTVHYLIMVGLYQLLYTRIPPHAA-LAETVEGAIAIKRPQLKGLINGVLRQFQRQQ 129 +G V +MVG L R + VE + + ++N VLR+ Sbjct: 106 SGVSPAVRDALMVGAAGSLELRTFEPRVLVNALVEWTK-CRDERGSRVVNAVLRRIVEGG 164 Query: 130 EELLAEFNASDA------RYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINRTH 182 E+LAE S A R P W K + ++ + ++++E ++Q + LR++ Sbjct: 165 PEILAEIERSVAFSDLAMRSGVPLWAAKSWESSFGRIEGRALIELHSQPVSLALRVSTG- 223 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R + L+E G+ D P ++RLE A LPG+++G +T Q S+ Sbjct: 224 VDRSEMVQRLEEGGVPAVESPDLPFSIRLEGTALPTILPGYDEGKITPQSESSMLVPLAF 283 Query: 243 -APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK- 300 +LD+CA GGKT + + PEA + D+ R+ ++RLG+ VK Sbjct: 284 TGRGKFSRLLDMCAGRGGKTGQLAQAFPEACLEGWDLSGPRIKAALKEMERLGISDRVKL 343 Query: 301 -QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 GD D +LLDAPCS +G RRHP+ KW ++ +Q+++L Sbjct: 344 SVGDSMELDPSFLP---DGVLLDAPCSGSGTWRRHPESKWRLSQDELARYGAMQAKLLGR 400 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA-------ELCETGTPEQP-GKQN 411 + TGGT++Y TCS+ EEN + + +D EL +P G Sbjct: 401 ALDLVSTGGTVLYCTCSLFREENEQVVAKVMSGRSDVVELEPPHELVSRCRKGRPWGYYT 460 Query: 412 LPGAEEGDGFFYAKL 426 P DGF+ A L Sbjct: 461 WPDNPWTDGFYMALL 475 >UniRef50_C6QJ47 Sun protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QJ47_9RHIZ Length = 468 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 135/444 (30%), Positives = 211/444 (47%), Gaps = 39/444 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A A+ V+ + + ++ + ++ +D+A + + VLR L ++ Sbjct: 39 ARDVAVSALFSVLVEKRPFDDVFAKAAAARNLAPRDRAFARLIATTVLRNRGSLQAVLRT 98 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIK-RPQLKGLINGVLR 123 + +P+ + +++ QLL + PPHAA++ V+ A + + L+N VLR Sbjct: 99 YLEKPLPEHLGRLEQILLAAAAQLLLIKTPPHAAISLAVDQCRADRVGKRFGNLVNAVLR 158 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINRTH 182 + LA + + P WL+ R + Y + + I A+ P + + + Sbjct: 159 RLSESGSGRLASLD--NVMLTFPDWLMARWSRTYGAAEARQIARASLSEPSLDITV---K 213 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 D+W + L+ + ++R V L G+ DG VQDA+A + L Sbjct: 214 SDADAWASRLNGVALPT-------GSIRCSHVGRVEELDGYNDGAWWVQDAAAALPVKLL 266 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 +G LDLCAAPGGKT + A A+VVAVD RL+R+ +NL+RLG+ A + Sbjct: 267 GDVSGLSALDLCAAPGGKTAQLA--AGGARVVAVDKSAGRLARLQENLQRLGLSAEISVA 324 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 D + + E FD +LLDAPC+ATG IRRHPDI +L+R D+ LA LQ+++L Sbjct: 325 DAQ---SFSSETAFDVVLLDAPCTATGTIRRHPDILYLKRPEDVAALAALQAKLLRQAAG 381 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE----------QPGKQNL 412 +K+GGTL+Y TCS+ PEE QI AFL D E + L Sbjct: 382 LVKSGGTLLYCTCSLEPEEGEEQIAAFLSEHRDFRRRPIALDETVIPLLWRTADGDLRTL 441 Query: 413 P--------GAEEGDGFFYAKLIK 428 P G DGF+ A L+K Sbjct: 442 PSYFSELPEGFRGLDGFYAAMLVK 465 >UniRef50_A7BCC1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCC1_9ACTO Length = 490 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 135/485 (27%), Positives = 199/485 (41%), Gaps = 63/485 (12%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK------VSDKDKALLQELCFGVLRT 54 ++K R +A + +V QG + ILP ++ SD+D A EL G LR Sbjct: 13 LRKADEPRRIAYDVLHEVETQGAFTNIILPKALRQARRDGHFSDRDAAFTSELVHGTLRA 72 Query: 55 LSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQL 114 + +LDW+I++ + RP+ ++ +G +QLL R+P HAA++ TV+ A Sbjct: 73 IGRLDWVISRHIDRPLADLDPRALVVLRMGAHQLLDMRVPDHAAVSATVDVAREHLTDGP 132 Query: 115 KGLINGVLRQFQRQQ--------EELLAEFNASDARYLHPSWLLKRLQKA-----YPE-Q 160 +N VLR R+ + + E A RY HP+W++ + A YPE + Sbjct: 133 VRFVNAVLRSITREDPSEREAAMDAIADEDQALGVRYSHPAWMVTAFRDALKAHGYPEDE 192 Query: 161 WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDE-AGMKGFPHADYPDAVRLETPAPVHA 219 ++ A+N+ P + L + S D ++ + A P AV LE+ P Sbjct: 193 LLDVLVADNEVPTVTLVARPSLMSVDELADEAEDILDTRVALGAVSPYAVLLESGDP-AR 251 Query: 220 LPGFEDGWVTVQDASAQGCMTWLAPQN-----GEHILDLCAAP------GGKTTHILEVA 268 LP DG QD +Q A E LDLCA P L Sbjct: 252 LPSIRDGRAGAQDEGSQLAALIAASAPLEGDNDERWLDLCAGPGGKAAL----LAGLAAG 307 Query: 269 PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS---QWCGEQQFDRILLDAPC 325 A+V A ++ R R+ + R V GDGR FDR+++DAPC Sbjct: 308 VGARVTANEVHPHRA-RLVERTTRQFDSIEVVSGDGRTFGGGQSAWRLGSFDRVVVDAPC 366 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 S G +RR P+ +W R D+ EL LQ E+LD + GG L Y TCS E Q Sbjct: 367 SGMGSMRRRPESRWNRTPADVEELTVLQRELLDRAVALTRPGGVLTYITCSPHAAETREQ 426 Query: 386 IKAFLQRTADAELCET------------GTPEQPG---------KQNLPGAEEGDGFFYA 424 ++ L+ + EL +T P G Q D F A Sbjct: 427 VERLLKA-GEVELLDTVALANECAPQALDVPASAGVIKGFSGRTLQLWDHRFGTDLMFVA 485 Query: 425 KLIKK 429 L K+ Sbjct: 486 CLRKR 490 >UniRef50_Q0F395 Sun protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F395_9PROT Length = 404 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 132/422 (31%), Positives = 203/422 (48%), Gaps = 29/422 (6%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +R A +++ ++ + + + ++ + + LL EL +GVLR L+ ++ Sbjct: 3 VRKAAIESLADILVRQRKAEQAMERYGVRLDARGRGLLHELVYGVLRRFYSLEADYSRFC 62 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 + T +++G YQL Y R+P HAAL+ETV A+ P+ G +N VLR+ Sbjct: 63 R---SKPDDTARMALLIGTYQLRYMRVPAHAALSETV-AAVMQSNPKAGGFVNAVLRRVS 118 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSR 185 + + + R P W+ + A+ EQ + EA P + L R Sbjct: 119 EHEP---PQKLKPNQRAELPRWIYAGWRDAFGAEQVTACSEALKTVPQLSL---ALFTDR 172 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 D WL + G+ P AV L V LPG+E+G TV D +AQ + L P Sbjct: 173 DKWLEQVTGMGIDAVAGELTPCAVLLPAGTDVTTLPGYEEGAFTVIDQAAQAAVMALEPV 232 Query: 246 -NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGD 303 ILD+CAAPGGKT + PEA ++A++++ +R+ R+ +NL+RLG V Q D Sbjct: 233 CRNGVILDICAAPGGKTAMLSHRFPEATILAIELNARRIPRLNENLQRLGCSNVQVIQAD 292 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 G + D +LLDAPCSA+G++RRHPD K+L ++ + LA LQ +L Sbjct: 293 G--LNLPLPSLSVDALLLDAPCSASGILRRHPDAKFLHDEQAVETLAALQRRLLSESLRV 350 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFY 423 LK +VYA CS+ P+EN L E+G ++ P DGFF+ Sbjct: 351 LKPDAAMVYAVCSIHPQENEQV------------LAESGA-LWDMQRRFPDIA-CDGFFH 396 Query: 424 AK 425 A Sbjct: 397 AV 398 >UniRef50_D0ME27 Fmu (Sun) domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0ME27_RHOM4 Length = 434 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 110/441 (24%), Positives = 175/441 (39%), Gaps = 46/441 (10%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 + +++ +L +K+ +D+A + E +G+LR + Sbjct: 16 EAVVTVLREILRSPLPADTVLQQFFRKHRKMGKRDRAFVAETVYGMLRHYRR-------- 67 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPH--AALAETVEGAIAIKRPQLKGLINGVLR 123 +A + + +L LLY + A L V RP +G + R Sbjct: 68 LAHAARRRADDLRFLT------LLYLEVFGFGDAILDLPV-------RPAERGALEAAAR 114 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINRTH 182 +F R+ + A Y P WL+ + P + ++ A P+ +R+N Sbjct: 115 RF-REPDLPDDPAAALGILYSLPDWLVAAWLEVLPRETVEARCAALKAPAPLTVRVNTLK 173 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R + L E G P P + LE A + F++G VQD +Q Sbjct: 174 ADRGTVQQRLLEEGFPSRPTPYSPVGLILEEKAFIFRTRAFQEGLFEVQDEGSQLISLLT 233 Query: 243 APQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKAT--- 298 + G+ ++D CA GGKT H+ + + ++ A DI E RL + +R + Sbjct: 234 EARPGQVVVDGCAGGGGKTLHLAALMEGKGRLYAFDIHEARLRELRPRTRRADVHNVRLH 293 Query: 299 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + + G+ D +L+DAPCS TGV+RR+PD W + L + Q +IL Sbjct: 294 VLPHNRASIVRRLYGKA--DAVLVDAPCSGTGVLRRNPDAAWKITPERVAALVEQQRQIL 351 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGA-- 415 +A P ++ GG LVYATCS+LP EN QI FL + L P Sbjct: 352 EAYAPLVRPGGRLVYATCSLLPAENEQQIHTFLNAHPEFTLIPAAEVLARQGIAFPHQTD 411 Query: 416 ---------EEGDGFFYAKLI 427 DGFF A L+ Sbjct: 412 AFLRVEPATHGTDGFFAAVLV 432 >UniRef50_D0GJC1 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GJC1_9FUSO Length = 442 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 104/391 (26%), Positives = 183/391 (46%), Gaps = 25/391 (6%) Query: 53 RTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP 112 + L +D+L+ K + ++R + L+ + + QL +T L E VE A I Sbjct: 61 KNLIYIDYLLEKTVK---NIQKRKIKQLLRISVAQLFFTEADNAGVLYEAVEVAKIINNH 117 Query: 113 QLKGLINGVLRQFQRQQEELLAEFNASD---ARYLHPSWLLKRLQKAYPEQWQSIVEANN 169 Q G +N L+ R ++E++ Y +P W + +++ YPE + I+++ Sbjct: 118 Q-SGFVNATLQSVLRNKDEIIENIPKDRKDGILYSYPQWFVNKMKVDYPEDYIDIMKSYK 176 Query: 170 QRPPMWLRINRTHHSRDSWLALLDE--AGMKGFPHADYPDAVRLETPAPVHALPGFEDGW 227 R + +R N ++D + +L E +G+ D V + + + +++G Sbjct: 177 SRSYLSVRYNSKKLTKDRFEKILSEVKSGI-----LFSADEVYYLSNSNIFDTEEYKNGN 231 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVY 287 + +QDAS+ + L + G+ +LD CAAPGGK+ IL+ +VA DI E ++ + Sbjct: 232 IIIQDASSYLAVKNLNVEKGDVVLDACAAPGGKSLAILQNFEPELLVAEDIHEHKIKILE 291 Query: 288 DNLKRLGMKA-TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 + K+ V D +FD+ILLD PCS GV+R+ P+ + I Sbjct: 292 NMKKKYNFSNLKVVLNDATQIESL--NMKFDKILLDVPCSGLGVLRKKPEKIYDLTGEQI 349 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ 406 L +LQ +I D+ + LK G ++Y+TC+ EN+ ++ FL++ D + E PE Sbjct: 350 KSLKKLQKKIFDSAYNSLKENGIILYSTCTFSINENTNNLEYFLEKYRDLVIEEVVIPEN 409 Query: 407 PGKQ-------NLPGAE-EGDGFFYAKLIKK 429 + + DGF+ AKL KK Sbjct: 410 VDIRKDQWGGVYITHKNIYNDGFYIAKLRKK 440 >UniRef50_P71675 Putative methyltransferase Rv1407/MT1451 n=56 Tax=Actinomycetales RepID=Y1407_MYCTU Length = 457 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 129/451 (28%), Positives = 193/451 (42%), Gaps = 40/451 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R A + + V + + +LP L Q+ + +D A EL +G R LD +I Sbjct: 16 ARRAAFETLRAVSARDAYANLVLPALLAQRGIGGRDAAFATELTYGTCRARGLLDAVIGA 75 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 R + L+ +G YQLL TR+ HAA++ TVE A G +NGVLR Sbjct: 76 AAERSPQAIDPVLLDLLRLGTYQLLRTRVDAHAAVSTTVEQAGIEFDSARAGFVNGVLRT 135 Query: 125 FQRQQE-----ELLAEFNASDARYL-----HPSWLLKRLQKAYPE---QWQSIVEANNQR 171 + E EL + + HP W+ + A + ++++ ++++R Sbjct: 136 IAGRDERSWVGELAPDAQNDPIGHAAFVHAHPRWIAQAFADALGAAVGELEAVLASDDER 195 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P + L + ++G P AV L P L DG VQ Sbjct: 196 PAVHLAARPGVLTAGELARA-----VRGTVGRYSPFAVYLPRGDP-GRLAPVRDGQALVQ 249 Query: 232 DASAQGCMTWL--APQNGE--HILDLCAAPGGKTTHILEVAPE--AQVVAVDIDEQRLSR 285 D +Q L AP +G+ LDLCA PGGKT + + + A+V AV+ R Sbjct: 250 DEGSQLVARALTLAPVDGDTGRWLDLCAGPGGKTALLAGLGLQCAARVTAVEPSPHRADL 309 Query: 286 VYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 V N + G+ + + DGR+ G FDR+L+DAPC+ G +RR P+ +W R+ D Sbjct: 310 VAQNTR--GLPVELLRVDGRHTDLDPG---FDRVLVDAPCTGLGALRRRPEARWRRQPAD 364 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT--------ADAE 397 + LA+LQ E+L A + GG ++YATCS E + L+R E Sbjct: 365 VAALAKLQRELLSAAIALTRPGGVVLYATCSPHLAETVGAVADALRRHPVHALDTRPLFE 424 Query: 398 LCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 G E P Q P D F A L + Sbjct: 425 PVIAGLGEGPHVQLWPHRHGTDAMFAAALRR 455 >UniRef50_C2KVE0 Possible rRNA (Cytosine-5-)-methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KVE0_9FIRM Length = 449 Score = 329 bits (845), Expect = 9e-89, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 186/428 (43%), Gaps = 51/428 (11%) Query: 17 QVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGK 73 +V +G+ + L L + +++KA L G+L QLD++I+ + + Sbjct: 55 KVFYEGEFIHLALRKLFSDYPGLGNREKAFLTRSSHGILERYLQLDYVISLYSSVKLKKL 114 Query: 74 QRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL 132 + V + + +YQLL+ +IP HA + E V+ K L +N VLR+ ++EE+ Sbjct: 115 KPVVLLSLRIAIYQLLFMDKIPEHAIVDEAVKSIKKRKLQGLVPFVNAVLRKIVGEKEEI 174 Query: 133 LAEF----NASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ-RPPMWLRINRTHHSRD 186 + P +L+ K Y E+ ++ EA Q ++R Sbjct: 175 KKKLASLPKEDAVSLCLPPDILEVFLKDYGRERTIAMAEAFLQSDGGFYIR--------- 225 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 + + R+ + F G VT+QD S+Q L + Sbjct: 226 ----------------NESGEGERV--SGNILEEERFRSGAVTIQDFSSQAVGKSLKLKE 267 Query: 247 GEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKA-TVKQGDG 304 G +LD C+APGGK HI + +V A D + +L + +N KRLG++ ++ D Sbjct: 268 GALVLDCCSAPGGKACHIASLLKGSGKVYARDAQKDKLRYIVENQKRLGLENMEIEHWDA 327 Query: 305 RYPSQWC---GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 R + GE D +L DAPCS GVI R PDI+ + EL LQ EIL + Sbjct: 328 RVLDERFIQEGEGILDAVLCDAPCSGLGVIGRKPDIRLHFTKEALEELQSLQREILSTVQ 387 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 ++K GG L+Y+TCS+ +EN LQ L + + +PG DGF Sbjct: 388 AYVKKGGQLLYSTCSLSFKENEENRDYILQNFP-FTLIKEE-------KFMPGK-PSDGF 438 Query: 422 FYAKLIKK 429 + A +K Sbjct: 439 YLALFQRK 446 >UniRef50_Q16CE2 RRNA methyltransferase RsmB n=15 Tax=Rhodobacterales RepID=Q16CE2_ROSDO Length = 423 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 144/439 (32%), Positives = 202/439 (46%), Gaps = 42/439 (9%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPP-LQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R A ++Q++ +G+ +S +L K+ +D+A L LR L + D ++ K Sbjct: 8 ARRSAVYLLDQILGEGRLMSELLTAGTLDKLEPEDRARAARLAQDTLRGLERADRILQKH 67 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLKGLINGVLRQ 124 +++ TV + VG +L T H + VE K LKGL N VLR+ Sbjct: 68 LSK---YPPLTVRNALRVGAVELC-TGTAAHGVVNAMVELVSRHKHYSHLKGLTNAVLRK 123 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVE-ANNQRPPMWLRINRTHH 183 A P WL L +A+ + +E A+ P+ L Sbjct: 124 VAADGPAAWDALRAPR----LPKWLRGPLVEAWGADAMARMEIAHFAGAPLDL---TAKS 176 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 + AL G P +VR+E V A+PGF DG VQDA+A + LA Sbjct: 177 DASAIAAL---TGGTVLPTG----SVRVENAGQVSAMPGFSDGTWWVQDAAAALPVRILA 229 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 PQ GE +LDLCAAPGGKT + A+V AVD R+ RV +NL R G+KA V D Sbjct: 230 PQPGETVLDLCAAPGGKTMQLAAAG--ARVTAVDDSSVRMGRVAENLARTGLKAEVLVQD 287 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 R S FD +LLDAPCSATG IRRHPD+ + + +L +QSE++D W Sbjct: 288 ARATS-----GTFDAVLLDAPCSATGTIRRHPDLPHAKDGSEFGDLIAMQSELIDHAWDR 342 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----------LCETGTPEQPGKQNLP 413 +K GG LV+ TCS+LP+E +Q+ L+R D + + G + P Sbjct: 343 VKPGGRLVFCTCSLLPDEGEVQVDEALERHEDMRTDADALGVPGVDPAWRTSEGGLRLRP 402 Query: 414 ----GAEEGDGFFYAKLIK 428 DGF+ A L K Sbjct: 403 DYWSDLGGLDGFYIAVLRK 421 >UniRef50_D2RG94 RNA methylase, NOL1/NOP2/sun family n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG94_ARCPR Length = 445 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 99/412 (24%), Positives = 187/412 (45%), Gaps = 35/412 (8%) Query: 40 DKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAAL 99 D+ +L + + +++ L +D +I ++ + + V + L++ + Sbjct: 44 DR-ILTAVYYKIMKRLGVIDKIIRDVVGVHPNILDPWLRSALRVTIEFLVFEK------- 95 Query: 100 AETVEGAIAIKRPQLKGLINGVL----------------RQFQRQQEELLAEFNASDARY 143 + + + ++K ++ L + + E E + Y Sbjct: 96 ----KYTKHLDKERVKKVVADFLSNVTHPYVGMYYFETFERIASYKLEPKDEIERLEFEY 151 Query: 144 LHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHA 203 L P+W ++++++ E+ + + +A N+ P + +R+N + + L G + + Sbjct: 152 LLPAWYIRKMKELLGEEAEELFKAFNREPMISIRVNTLKATVKEVIDHLRRQGKEVIVSS 211 Query: 204 DYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTH 263 P ++ E P + G VQ+ ++ L P+ E ++DLCAAPGGKT H Sbjct: 212 VVPTVLKFEGPYDFDKSKLYRKGKFVVQEEASALASILLDPKPNETVVDLCAAPGGKTIH 271 Query: 264 ILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILL 321 + E+ + A D+DE RL R+ + +KR G+K + + D R GE D+++L Sbjct: 272 MAELMRNRGVIHAFDVDELRLKRMEELIKRCGVKIVKIYKMDARKAVDVLGESIADKVML 331 Query: 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEE 381 DAPC++ G + ++P+++W R+ I E+AQLQ E+L+ LK G ++Y TCS+ EE Sbjct: 332 DAPCTSDGTLMKNPELRWRIREEKIEEIAQLQYELLNTGIDLLKPKGRILYCTCSIFREE 391 Query: 382 NSLQIKAFLQRTADAELCETGTPEQPGK-----QNLPGAEEGDGFFYAKLIK 428 N ++ L+ D +L G + P GFFYA L K Sbjct: 392 NEDVVERVLKERDDVKLVPLEGYYSEGFLKVTIRAFPHKHNTIGFFYALLEK 443 >UniRef50_Q2RXU7 tRNA/rRNA cytosine-C5-methylase n=8 Tax=Alphaproteobacteria RepID=Q2RXU7_RHORT Length = 454 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 122/444 (27%), Positives = 180/444 (40%), Gaps = 38/444 (8%) Query: 9 SMAAQAVEQVVEQGQSLS---NILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 A + + + + ++ + KD+ + L + LR ++L WLI++ Sbjct: 8 QCAIDLLVDIDATNRPADGIASAFVRARRFMGSKDRRAVTALAWSTLRHRARLSWLIDRF 67 Query: 66 MARPMTGKQRTVHYLI--MVGLYQ--LLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 P H L+ +L+ HA + + A L G Sbjct: 68 GGTPKARALVIAHLLVVERQSAEDVRMLFITRAQHAP--QPLTDAEERLVDGLAG----- 120 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 + L +D R P WL L+ + E+ + + A P+ LR+N Sbjct: 121 --------KPLEFREMPADVRLEVPDWLPPLLEPLFGERLEDELRALQAEAPLDLRVNAL 172 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 R+S L + P A P A+R E V F DG V VQD +Q Sbjct: 173 KSDRESARLALAREQVDTRPGALSPCALRAEGRPNVAITAPFCDGLVEVQDEGSQMVALL 232 Query: 242 LAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 A G +LDLCA GGKT + + + +VA DI E RL+R L+R G+ + Sbjct: 233 CAVAPGMSVLDLCAGAGGKTLALAAGMENKGTLVATDISEGRLARAQTRLQRAGVHNVTR 292 Query: 301 QGDGRYPSQWCG--EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + +W + FD +L+DAPCS TG RR+PD +W I L QS +LD Sbjct: 293 KVLDPETRKWLKRRKASFDVVLVDAPCSGTGTWRRNPDARWKLTPDTISALNAEQSALLD 352 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-------------GTPE 405 +K GG LVYATCS+LP EN QI AFL+R D G + Sbjct: 353 RAAALVKPGGRLVYATCSLLPAENEAQIAAFLERRDDYRALPVAETWAKVSPAPYPGAAD 412 Query: 406 QPGKQNLPGAEEGDGFFYAKLIKK 429 + P + DGFF + L ++ Sbjct: 413 VSWLRLTPASHGTDGFFVSILERQ 436 >UniRef50_UPI0000ECD55E Putative RNA methyltransferase NOL1 (EC 2.1.1.-) (Proliferating-cell nucleolar antigen p120) (Proliferation-associated nucleolar protein p120). n=1 Tax=Gallus gallus RepID=UPI0000ECD55E Length = 722 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 111/336 (33%), Positives = 159/336 (47%), Gaps = 30/336 (8%) Query: 120 GVLRQFQRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 GV R+ R ++E LA A Y + +LLK L +P + + +EAN P+ +R Sbjct: 295 GVKREEGRTRQEYLALLRRDMAAYYSYSDFLLKMLMDIFPLPELINFLEANEVPRPVTIR 354 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYP--DAVRLETPAPVHALPGFEDGWVTVQDASA 235 N R L G+ P + V ++ P+ A P + G +Q AS+ Sbjct: 355 TNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSSVPIGATPEYLAGHYMLQGASS 414 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLG 294 + LAPQ E ILD+C APGGKT++I ++ ++A D + +RL V NL RLG Sbjct: 415 LLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSNAERLRSVVGNLHRLG 474 Query: 295 MKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + V DGR + G FDR+LLDAPCS TGVI + P IK + ++DI A LQ Sbjct: 475 VTNAVVSNCDGRQFPKVLGG--FDRVLLDAPCSGTGVISKDPAIKTNKDEKDILRCAHLQ 532 Query: 354 SEILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG- 408 E+L + + +TGG +VY TCS+ EEN + L++ + L TG Sbjct: 533 KELLLSAIDSVNATSETGGYIVYCTCSITVEENEWVVDYALKKR-NVRLVATGLDFGKEG 591 Query: 409 ----------------KQNLPGAEEGDGFFYAKLIK 428 ++ P DGFF AKL K Sbjct: 592 FTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKLKK 627 >UniRef50_Q8TGZ4 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGZ4_METKA Length = 452 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 108/447 (24%), Positives = 199/447 (44%), Gaps = 30/447 (6%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKAL---LQELCFGVLRTLSQLDWLINKL 65 + A+ + E +SL + + +D + + CF +++ L +D + Sbjct: 8 ELTARVFVEWEETRRSLRECVKKVLLNEGVRDHRVWGTIHAYCFELMKRLRTVDAFLEAT 67 Query: 66 MAR-PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + + V + VG +++ + + P A E V+ + +N VL Sbjct: 68 IRNAKLFDLDPWVRNALRVGTFEMKFNDVKPAIATNEAVKIVVECVGEGPARFVNAVLYD 127 Query: 125 FQR-QQEELLAE----FNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRI 178 +R + ++L Y HP W +K L E + +++ANN+ P +LR+ Sbjct: 128 VERLELSDVLNRAKDTVERLAIEYSHPEWFVKHLMDLLGENELTKLMDANNREPERYLRV 187 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL-ETPAPVHALPGFEDGWVTVQDASAQG 237 + D + L++ G+ D P +R+ + P + GWV QD ++ Sbjct: 188 HAHMVDPDKAILALEDDGVAVEEDPDLPFMLRVVDHDVPPVRTEPYRRGWVAYQDKASAA 247 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L P+ G+ +LD CAAPGGK+ ++ + E ++ VD++ +RL + N +R G++ Sbjct: 248 AAYALRPEPGDRVLDACAAPGGKSAYLYALTEGEIELTCVDVNPRRLREMRRNFRRWGIE 307 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 A +++ D + E FD L+D PCS++G R P+ KW + R + A+ Q I Sbjct: 308 ARLRRADSSRLYRETDE-TFDLALVDPPCSSSGAYVRAPEAKWTVKWRHVKRYARGQLSI 366 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG-------- 408 L + P ++ TLVY+TCSV E+ ++ FL+ + E+ E PG Sbjct: 367 LRGVAPLVER--TLVYSTCSVTVVEDESVVRRFLREFDEFEVEEPFGFGSPGFDSWMNER 424 Query: 409 -------KQNLPGAEEGDGFFYAKLIK 428 ++ P +GFF A+L++ Sbjct: 425 YPWADRVRRFWPHRHRTEGFFVARLVR 451 >UniRef50_Q0ADT5 Fmu (Sun) domain protein n=50 Tax=Betaproteobacteria RepID=Q0ADT5_NITEC Length = 424 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 120/431 (27%), Positives = 185/431 (42%), Gaps = 45/431 (10%) Query: 14 AVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 AV +V+ +L + ++ ++++ E FG+LR L+ L K AR + Sbjct: 14 AVRKVLPLQAPADVLLRQFFRDYPQLGQNGRSMIAETVFGILRHRFFLEVLTGKATAREL 73 Query: 71 TGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE 130 L + +Q + R +L LI V ++ +Q + Sbjct: 74 --------VLAYLARFQGMNLR--------------------ELTPLIREVESKWIQQIK 105 Query: 131 ELLAEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWL 189 + E R P WL+ +LQ+++ E + + Q P+ +R+N R+ + Sbjct: 106 AVKLEEQPQFIRAEFPEWLVGKLQQSWSDEDILRLGQVLQQPAPLDIRVNSLLAKREEVI 165 Query: 190 ALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEH 249 A+L + G++ P +RL ++ F G + VQD +Q LAP+ GE Sbjct: 166 AVLKQEGIEAQSTPFSPVGIRLTGNPAINRNALFLSGKIEVQDEGSQILGFLLAPKRGEM 225 Query: 250 ILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS 308 ++D CA GGKT + + ++ A DI E+RL+ + LKR G+ Q Sbjct: 226 VVDFCAGAGGKTLLLGALMHSRGRLYAFDISEKRLNNLKPRLKRSGLSNVHPQHIDSEKD 285 Query: 309 QWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 + DR+L+DAPCS G +RR+PD+KW + I EL + Q IL A LK Sbjct: 286 IKLKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQSPESINELQKKQIAILTAAAKLLKP 345 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG----------TPEQPGKQNLPGAE 416 GG LVYATCS+LPEEN I+ FL + G Q P Sbjct: 346 GGRLVYATCSLLPEENQQVIERFLADHPQFSILNCGELLAQQKINLPDTGEFLQLSPLYH 405 Query: 417 EGDGFFYAKLI 427 DGFF A L Sbjct: 406 NTDGFFAAVLE 416 >UniRef50_C4XT41 rRNA (Cytosine-C(5)-)-methyltransferase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XT41_DESMR Length = 477 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 117/444 (26%), Positives = 185/444 (41%), Gaps = 35/444 (7%) Query: 7 LRSMAAQAVEQVVEQ----GQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDW 60 R +A + +V+ GQ + L + +D+ L EL +G LR +LD+ Sbjct: 45 ARRIALTVLGRVLPSPKSPGQDVQAALDVALADSTLDPRDRGLATELVYGYLRLCGRLDY 104 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 ++ + + P T V ++ + Y++L+ ++P +A++ V L G+ N Sbjct: 105 ILAQFLKNP-TAVPLAVRRILGLAAYEILHCAKVPAYASVDWAVSAVRKAGGKGLSGMAN 163 Query: 120 GVLRQFQR-----QQEELLAEFNASDARY-----LHPSWLLKRLQ-KAYPEQWQSIVEAN 168 VLR+ ++ S+A Y P W++ P++ + + A Sbjct: 164 AVLRRVAADPGAFEEPGFYRRDRPSEAVYLSRAFSCPEWIVSLWLGACGPDETRQHLAAQ 223 Query: 169 NQRPPMWLRINRTHHSRDSW---LALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFED 225 + P+ LR+N + LA L A FP P ++ Sbjct: 224 AEPAPLGLRVNGARPEAQALFNALAALPGALYAVFPTIAVPTGTDFAAAG-LNLPELLAS 282 Query: 226 GWVTVQDASAQGCMTWLA-PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLS 284 G ++ Q A+AQ + L P+ E I D CA GGKT I E +V A D+ RL+ Sbjct: 283 GALSRQSAAAQDVLYRLDLPEWPEPIFDACAGRGGKTLLIAEAGK--RVFAADMHAARLA 340 Query: 285 RVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 + RLG+ ++ ILLDAPCS GV+ R PD KW R+ Sbjct: 341 GLPREAARLGLPPI--PAFRASATRMALGAPVGTILLDAPCSGLGVLSRRPDAKWRRQPE 398 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP 404 D+ L +LQ +L+A + +L GG LVY TC+V P EN I R D L + Sbjct: 399 DLAGLTRLQGAMLEAAYANLAPGGRLVYITCTVNPAENEKAIDRLGSRRHDLILDVEASA 458 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIK 428 +P G+ F+ A L K Sbjct: 459 -------VPDPVLGETFYGAVLRK 475 >UniRef50_C2GHU0 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Corynebacterium glucuronolyticum ATCC 51866 RepID=C2GHU0_9CORY Length = 620 Score = 327 bits (839), Expect = 5e-88, Method: Composition-based stats. Identities = 130/494 (26%), Positives = 188/494 (38%), Gaps = 86/494 (17%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R + A+ V G + LP + +S +D A E+ +G +R + LD +I Sbjct: 140 PRLITLSALGAVFNDGAYGNIALPREITEAGLSGRDAAFATEIGYGTMRMVGVLDEIIGS 199 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 +RPM+ V + +G+YQLLYTR+ HAA+ +V ++KG +N +LR Sbjct: 200 CSSRPMSELDPIVLNALRMGIYQLLYTRVEDHAAVDTSVRLV----PQRVKGFVNAILRA 255 Query: 125 FQRQQ-----EELLAE--FNASDARYLHPSWLLKRLQKAYP------------------- 158 Q++ EEL E R HP W+ + Sbjct: 256 VQKKPLEQWIEELAPEGKLAQLAFRTGHPEWIARSYLATLSAPSGAVPSANGVGTESSAD 315 Query: 159 ------------------------------EQWQSIVEANNQRPPMWLRINRTHHSRDSW 188 ++ +EA++ RP + L S D Sbjct: 316 GARADASAARSDPSTDPSAEPSTGSSTILFDELAKALEADSTRPIVHLAAKPGEISADEL 375 Query: 189 LALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGE 248 G A P AV LE P ++ +QD +Q L + + Sbjct: 376 -----ALITGGEEGAYSPYAVYLEGGNP-ADFEPVQEKLAFIQDEGSQLIGAALVRVDVD 429 Query: 249 ----HILDLCAAPGGKTTHILEVA--PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 LDLCA PGGK T I +A A V AV+I R + + G+ TV G Sbjct: 430 NDAGRWLDLCAGPGGKATMIGSLAAIDGATVTAVEIAPHRGDLIRKATE--GLPVTVVVG 487 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 DGR FDR+L+DAPCS G +RR + +W + + DI EL LQ E+L+A Sbjct: 488 DGRTVDV---GSSFDRVLVDAPCSGLGSLRRRQESRWTKDESDIEELTALQYELLEAGVS 544 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE-------TGTPEQPGKQNLPGA 415 K GG +VY+TCS E + L EL + Q Sbjct: 545 RCKPGGVVVYSTCSPDLRETREIVDKALVTLPVEELDAHPLVAPMDNVGREKSVQMWTYR 604 Query: 416 EEGDGFFYAKLIKK 429 D F+A L KK Sbjct: 605 HGTDSMFFAVLRKK 618 >UniRef50_D2RGI9 Fmu (Sun) domain protein n=2 Tax=Archaeoglobaceae RepID=D2RGI9_ARCPR Length = 443 Score = 326 bits (837), Expect = 8e-88, Method: Composition-based stats. Identities = 112/447 (25%), Positives = 199/447 (44%), Gaps = 37/447 (8%) Query: 9 SMAAQAVEQVVEQGQSLSNILPP-LQQKVSDKDKAL---LQELCFGVLRTLSQLDWLINK 64 + A+ ++ + E S + L K+S D A+ + F + + L+ +D+++ Sbjct: 6 ELVAEVLKVIEETKLSEKEAIKRCLSGKIS--DHAIWSSVHAYVFEIEKRLNLIDFILRN 63 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 R + L+ VG+Y++ + + P A V ++ L N VLR+ Sbjct: 64 CF-REFDKQNTVFKNLLRVGVYEMHFKGVHPALATDSIVRIVKQRFNLKMASLANAVLRR 122 Query: 125 FQRQQEEL----LAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRIN 179 ++ E L + Y HP W ++ E + +++ANN++ +++R+N Sbjct: 123 AEKFDYERRFRKLGKVKRLALEYWHPEWFVRYAIDMLGEDEAIKLMKANNEKQSVYVRVN 182 Query: 180 RTHHSRDSWLALLDEAGMKGF--PHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 + + L+ +G++ P + AV+ E V L +G VQD ++ Sbjct: 183 ELKANIEEVRRYLENSGVEIEETPLPEVFKAVKYEKHPSV--LDWHSEGKYVVQDLASCF 240 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L PQ E ILDL +APG K +HI + + ++AVD +RL R+ +K+LG+K Sbjct: 241 VSHVLDPQPDEIILDLASAPGLKASHIASMMENKGVIIAVDNSAERLERMKAKMKQLGVK 300 Query: 297 ATVKQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 V + DG D++L+D PCS+TG R +P +KW + +Q + Sbjct: 301 NVVCRLADGC----KIKVGDVDKVLVDPPCSSTGSFRSYPCVKWRFDRELYLKTIDVQRK 356 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-----GTPEQPGK- 409 ++ + +LK+GG +VY+TCS+ +EN + F E + G E GK Sbjct: 357 MIKNAFRNLKSGGIMVYSTCSITFDENEENV-MFASEFFKVEEVKPVIGVRGIREFRGKV 415 Query: 410 --------QNLPGAEEGDGFFYAKLIK 428 + P + GFF +KL K Sbjct: 416 FPFWDKVVRTFPHLHDCTGFFISKLKK 442 >UniRef50_UPI0001C31BDA sun protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDA Length = 444 Score = 326 bits (837), Expect = 8e-88, Method: Composition-based stats. Identities = 130/443 (29%), Positives = 197/443 (44%), Gaps = 29/443 (6%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNIL--PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R +AA + +V G L + + +D A L FG ++ LD +I Sbjct: 9 SPARQVAAAVLRRVESDGAYADRALAGEARRAGLDARDHAFAMALAFGAVQRRRTLDHVI 68 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGV 121 +L RP+ V + +GL QLL+ + PHAA+ ++VE A A P K L+N V Sbjct: 69 ERLARRPVGQLDPPVRDALRLGLLQLLFLGGVAPHAAVDQSVELAKAAGGPGYK-LVNAV 127 Query: 122 LRQFQRQQEELLAEFNASDAR-----YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 LR+ R+ +LA+ + + P W+ A E+ ++++ N+ Sbjct: 128 LRRGAREGPRILAQLDDRSPHGAALLHSVPDWIAALWWDALGAEEARALLARVNEPAETA 187 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHAD----YPDAVRLETPAPVHALPGFEDGWVTVQ 231 LR+N + A L E G+ P A + + +++ V + P F G + Q Sbjct: 188 LRVNTLAADPAAVAAELGERGVAVRPAALEGIPLDEGLVVDSAFDVRSDPLFASGALVAQ 247 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVD----IDEQRLSRVY 287 +A LAP G +LDLCAAPGGK TH+ + A E R + Sbjct: 248 SRAAMAAARLLAPAPGARVLDLCAAPGGKATHLAALVGAAGAAGEVVAVERHEGRAEALR 307 Query: 288 DNLKRL--GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 + +RL G V+ GD P FD +L+D PCS G ++ PD++W Sbjct: 308 ETCERLRAGGIVRVETGDAAQPRD--PGDHFDAVLVDPPCSGLGTLQGRPDLRWRASAEA 365 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE 405 I EL++LQ IL A L+ GG L+YATC++ P EN + AFL E T Sbjct: 366 IGELSRLQGRILAAGAAALRPGGALLYATCTISPRENEQVVDAFLAAHDGFERVST---- 421 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 +Q P ++ DGFF A L + Sbjct: 422 ---RQLTPSRDDTDGFFLALLRR 441 >UniRef50_Q0AKI8 Fmu (Sun) domain protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKI8_MARMM Length = 433 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 140/432 (32%), Positives = 201/432 (46%), Gaps = 34/432 (7%) Query: 16 EQVVEQGQSLSNILP--PLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGK 73 V++Q ++L L P +SD+D+A + + R L Q ++N L++RP+ Sbjct: 16 MAVMKQRRTLEAALEHTPEFAAMSDRDRAFARAITATTFRRLGQTRTVLNGLLSRPLHET 75 Query: 74 QRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGLINGVLRQFQRQQEEL 132 L++ G QLL+ PHA ++ TVE A A + LKGLIN VLR+ R+ E Sbjct: 76 SEGAQALLITGATQLLWMDGAPHAVVSSTVELADARSDARKLKGLINAVLRRVDREGRER 135 Query: 133 LAEFNASDARYLHPSWLLKRLQKAYPEQWQ-SIVEANNQRPPMWLRINRTHHSRDSWLAL 191 L D P WL + AY + A PP+ L + + +R+ W Sbjct: 136 LKPTLPRD---NLPDWLRDSWRAAYGPGTLSRMANAITVAPPLDLTV-KDPDTREHWARA 191 Query: 192 LDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHIL 251 LD ++R +T V ALPG+ +G QDA+A T L G ++ Sbjct: 192 LDA-------TILPNGSLRRDTVGDVRALPGYREGAWWAQDAAAAIPATLLTLGPGSSVI 244 Query: 252 DLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWC 311 DLCAAPGGKT + + V A+D+ E+RL RV +NL R G+ AT+ GD + Sbjct: 245 DLCAAPGGKTMQLAATGAD--VTALDLSEKRLERVRENLGRTGLSATLVAGDA---LTYK 299 Query: 312 GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLV 371 Q D +LLDAPC+ATG +RRHP+ W++R D +A+LQ E++ A LK GG LV Sbjct: 300 PAQPVDAVLLDAPCTATGTLRRHPEAAWIKRADDTGRMARLQDEMIKAAAAMLKPGGQLV 359 Query: 372 YATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQ--------------NLPGAEE 417 TCS+ PEE R + E G + Sbjct: 360 LCTCSLQPEEGEALAGRVAGRHRQLKESPIQPDELAGVESALTPAGWVRLTPALWAEQGG 419 Query: 418 GDGFFYAKLIKK 429 DGFF A+ K+ Sbjct: 420 MDGFFIARFTKR 431 >UniRef50_C7LUK3 Sun protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUK3_DESBD Length = 424 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 130/444 (29%), Positives = 194/444 (43%), Gaps = 44/444 (9%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINK 64 + R +A + + ++ Q L + + V + DK L EL +G LR ++D+L+++ Sbjct: 5 SARRLALDILRRTLDHKQDLQAAVDEVLNPVQAGPDKGLATELAYGYLRMRGRIDFLLSQ 64 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGV-- 121 L+ P+ + ++ V +Y+LL+ RIP +A L V + + NGV Sbjct: 65 LLKNPVQT-SPIMKRILGVAMYELLFLSRIPDYATLDWAVTLVRERLDQTMGKVANGVLR 123 Query: 122 --------LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 +R + Q + A Y P WL + +Y EQ Q+ ++A P Sbjct: 124 SLLRLGLSVRFEEYYQTKTAGHDQFLSAWYSCPQWLARMWLGSYGKEQTQAFLQATLSAP 183 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMK----GFPHADYPDAVRLETPAPVHALPGFEDGWV 228 P+ +RINRTH ++ L GF +P+ ++ +G Sbjct: 184 PLGVRINRTHAQAETLRENLQPLQQDSSNWGFALTQWPEFLQ----------HAVAEGAA 233 Query: 229 TVQDASAQGCMTWLAPQNG-EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVY 287 T Q +AQ M L ++ +LD CA GGKT + E V A D++ RL ++ Sbjct: 234 TRQSLAAQKIMDALGVEHWPSPVLDACAGRGGKTYLMSEQGKN--VWASDVNVFRLRQLK 291 Query: 288 DNLKRLG--MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 RLG + A QG G YP + F LD PCS GV+ R PDIKW R D Sbjct: 292 AEGARLGFDIPAFRSQGQGPYPLRQTPRTIF----LDVPCSGLGVLSRRPDIKWKRTAAD 347 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE 405 L +LQ EIL A L +GG LVY TC++ PEEN QI F + Sbjct: 348 CAGLVKLQEEILRAAADLLTSGGCLVYVTCTLNPEENEKQIDRFASLHPEFSRLRQA--- 404 Query: 406 QPGKQNLPGAEEGDGFFYAKLIKK 429 Q+ P G+ F+ A L KK Sbjct: 405 ----QSGPAEGLGEFFYGAVLRKK 424 >UniRef50_C6BVK4 NusB/RsmB/TIM44 n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVK4_DESAD Length = 427 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 114/447 (25%), Positives = 195/447 (43%), Gaps = 38/447 (8%) Query: 1 MKKQRN---LRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTL 55 MKK + R +A + V + ++ G +L K+ +D+ + E+ +G LR Sbjct: 1 MKKTNSLPGPRGVAYECVTRSLDGGADAQAVLDNALTAAKLDGRDRGFVTEILYGYLRMR 60 Query: 56 SQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLK 115 +L ++N ++RP G + ++ + Y++L+ +P +A++ V+ A + R +L Sbjct: 61 LRLQSVLNCFLSRP-DGLPAPILRVLGMAAYEILHMDVPAYASVDWGVDSAKRLSRGKLG 119 Query: 116 GLINGVLRQFQRQQEELL----------AEFNASDARYLHPSWLLKRLQKAYP-EQWQSI 164 GL N VLR+ R E+ +E A Y P W+++ +Y ++ + Sbjct: 120 GLANAVLRKVARLAEDGADEDFFRRNSDSEIEFLSAYYSCPEWIVELWVDSYGRDKAEQY 179 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 +EA P ++ + + L E A + A G + Sbjct: 180 LEAQICPPAAGFVLDTKSNEAKAAAEQLLEENDYIASDG---QAFAFYSGYWPQAFNGLK 236 Query: 225 DGWVTVQDASAQGCMTWLAPQNGE-HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRL 283 + VT Q +A+ ++ L P + D C+ GGK+ + + ++A D +RL Sbjct: 237 ES-VTRQSYAAREALSVLGPSEWPTPVWDGCSGRGGKSRFLHS-KNISPIIASDPHARRL 294 Query: 284 SRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 + + + +V + ++ LLD PCS GV+ R PD K+ R Sbjct: 295 AALKREV------PSVASFRASAINPPLAKESIGTALLDVPCSGLGVLSRRPDTKFKRTP 348 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA-ELCETG 402 D+ L LQS ILD W ++ GG L Y TC++ P EN QI AFL+R DA L E Sbjct: 349 EDVDSLVHLQSRILDNTWETIRKGGRLAYITCTLNPAENEGQIGAFLKRHKDAVPLKEWT 408 Query: 403 TPEQPGKQNLPGAEEGDGFFYAKLIKK 429 TP P +E + F+ A + KK Sbjct: 409 TP--------PDSELHEFFYSALIEKK 427 >UniRef50_Q1MPZ7 TRNA and rRNA cytosine-C5-methylases n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MPZ7_LAWIP Length = 447 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 120/449 (26%), Positives = 200/449 (44%), Gaps = 35/449 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLD 59 KK + R +A A++++ ++GQ + +L L +S +D AL+ EL +G LR ++ Sbjct: 13 KKTKTAREIATIALQKI-KEGQPIQVLLNNILLTYPLSKQDIALVTELVYGYLRLEIRIV 71 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 W++ + + + V +I + Y+LL+ +IPP+A + V + L G+ Sbjct: 72 WILEQFLKKS-EHLPYEVKLIIGLATYELLFLDKIPPYATIHTAVSTIKSKFGKILAGVA 130 Query: 119 NGVLRQFQRQ-------------QEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSI 164 N L+ R+ ++ L + + Y P W++K Y ++ + Sbjct: 131 NASLQTIFRKSKHNDGPKYNTFYKQRLPEDIHYLSIWYSIPLWIIKLWISNYGTQKTLKL 190 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 ++ QRP +R+N + + L + G G P + + L + Sbjct: 191 AASSLQRPYFCIRVNPIYDNWRELYENLCQNG--GIPIGRS--GIYFKPNRKPKELQYYL 246 Query: 225 D-GWVTVQDASAQGCMTWLAPQNGE-HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQR 282 + G++++Q A +Q M L Q + I D CA GGKT+ +LE A DI + Sbjct: 247 EQGYISIQGAGSQIVMDALDIQTWKIPIWDACAGRGGKTSLLLEWGIPIF-AASDISLSK 305 Query: 283 LSRVYDNLKRLGM-KATVKQGDGRYPSQW-CGEQQFDRILLDAPCSATGVIRRHPDIKWL 340 L + KRL + ++ P+ Q ILLD PCS G + RHPDIK Sbjct: 306 LQGLIAETKRLKLLTPSIFCSSSTQPALKNVLCSQLKTILLDVPCSGLGTLSRHPDIKKF 365 Query: 341 RRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE 400 R +D+ +L QLQ +IL+ W L G L+Y TC+V P EN Q+ FL+ A L + Sbjct: 366 RTPKDVDKLIQLQKKILNTAWEFLPPQGELIYITCTVNPSENEQQVIQFLKDYPQASLKK 425 Query: 401 TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + +P D F A + KK Sbjct: 426 Q-------WEGIPDRFGTDIMFGAIIQKK 447 >UniRef50_C0W3L2 rRNA (Cytosine-C(5)-)-methyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3L2_9ACTO Length = 527 Score = 323 bits (830), Expect = 6e-87, Method: Composition-based stats. Identities = 126/464 (27%), Positives = 209/464 (45%), Gaps = 45/464 (9%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R ++ +A+ +V + G + +LPP+ ++ +D L +G LR + D +I + Sbjct: 65 ARLVSLEALTKVRQDGGFANLVLPPMLDAARLDRRDAGFATALTYGTLRLQGRYDAIIAQ 124 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + R + V ++ +G +QLL R+ HAA++ TV+ A GL+N VLR+ Sbjct: 125 CVDRRLDQLDGVVLDVLRLGTHQLLGMRVATHAAVSATVDLASHAAGRGAAGLVNAVLRR 184 Query: 125 FQRQQ---------EELLAEFNASDARYLHPSWLLKRLQKAYP------EQWQSIVEANN 169 ++ E+ E NA A + HP W++K L++A E+ ++++EA+N Sbjct: 185 ISQKDLEQWLAELTEQAADELNALSATHSHPVWVVKALRQALASNDRPQEELEALLEADN 244 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAG-MKGFPHADYPDAVRLETPAPVHALPGFEDGWV 228 P + L S + + +EA P AV L P LP Sbjct: 245 ADPEVVLCARPGLISPEHLVKEAEEATRGHAHVGDRSPYAVVLPGGDP-GRLPAVRSSAA 303 Query: 229 TVQDASAQGCMTWL--APQNG--EHILDLCAAPGGKTTHILEVAPE--AQVVAVDIDEQR 282 V+D +Q L A G E LDLCA PGGK + A + A++VA ++ R Sbjct: 304 GVEDEGSQLVALVLSEAAVEGRDERWLDLCAGPGGKAALLGARAAQRGARLVANEVTAHR 363 Query: 283 LSRVYDNLKRL--GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL 340 V +++ + G+ V+ DGR Q ++DR+L+DAPCS G +RR P+ +W Sbjct: 364 AELVRASVRAVPEGV-VEVRCDDGRLYGQ-AEPGRYDRVLVDAPCSGLGSLRRRPEARWR 421 Query: 341 RRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA------ 394 R+ D+ ELA+LQ E+L + ++ GG + Y TCS E L ++ ++R Sbjct: 422 RQPTDVAELAELQRELLVSALAAVRVGGLVAYVTCSPHVLETELVVRDVIRRLEREGRGA 481 Query: 395 ----------DAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 ++P Q P + D F A L + Sbjct: 482 EVLHAGDVATRVAPVPPAGADRPMLQLWPHLDGTDAMFCALLRR 525 >UniRef50_C6WT60 Fmu (Sun) domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT60_METML Length = 514 Score = 323 bits (828), Expect = 9e-87, Method: Composition-based stats. Identities = 112/451 (24%), Positives = 177/451 (39%), Gaps = 51/451 (11%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M NL AA + ++ L + + K++A + E +GVLR L Sbjct: 1 MTP--NLIRQAAIVLSNLLTFSSPADAKLSEFFRNNRDLGTKERAFVAESVYGVLRRLRF 58 Query: 58 LDWLINKLMARPMTGKQRTVHYLIM---VGLYQLLYTRIPPHAALAETVEGAIAIKRPQL 114 L + P ++ + +L+ + + +L L E + + + + Sbjct: 59 LSTVTANDENDPDDARKLILAWLLRVQGMSIRELEPM-------LNEQQKEWAHLIKAKS 111 Query: 115 KGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPP 173 + L +D R WL +L Y E + +I + +++ Sbjct: 112 T---------------DNLPLAVQADVR----DWLWDKLVAQYGEAEALTIARSMHEQAT 152 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGF----PHADYPDAVRLETPAPVHALPGFEDGWVT 229 + LR+N +RD LA G P +R+ + F +G + Sbjct: 153 LDLRVNTIKGTRDEVLAKFIAENTSGETNVTKTPYSPLGIRMPNRMNIGRHVLFTEGKIE 212 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYD 288 VQD +Q +A + G + D CA GGKT I + ++ A D+ E+RL + Sbjct: 213 VQDEGSQLLAHLVAAKRGMMVADFCAGAGGKTLAIGALMRNTGRIYAFDVSEKRLHNLGQ 272 Query: 289 NLKRLGMKA--TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 LKR G+ P +FDR+L+DAPCS G +RR+PD+KW + D+ Sbjct: 273 RLKRSGLSNLNAQVISSETDPKLKRLNGKFDRVLVDAPCSGLGTLRRNPDLKWRQTPEDV 332 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC------- 399 EL Q+ IL K GG LVYATCS+L +EN + FL D +L Sbjct: 333 AELNVKQTNILARAAKLTKVGGRLVYATCSLLSDENEKIAEQFLATHPDFKLLNAAEILA 392 Query: 400 --ETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + + LP DGFF A K Sbjct: 393 QQQIELDTGDYLKLLPHLHNTDGFFAAVFEK 423 >UniRef50_O27960 Fmu and fmv protein n=1 Tax=Archaeoglobus fulgidus RepID=O27960_ARCFU Length = 437 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 106/446 (23%), Positives = 192/446 (43%), Gaps = 37/446 (8%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 + +AA+ + +V S+ + + L K + + L+ L+ +D+ Sbjct: 8 SNVIPTQEIAAKVLAEVERSRISVKSAVQKLAGGFDYKVRGSVHAYSVETLKRLNAIDYF 67 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + + + G L+ + +Y++ Y + P A V A + L+N V Sbjct: 68 LKSTLKK-FDGLDPFTRNLLRIAVYEMKYKGVHPALATDSAVRIARERGK---ASLVNAV 123 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINR 180 LR+ ++ + Y HP W +K + E +++AN + PP ++R+N Sbjct: 124 LRKVEKLDIQAEGRLKELSLTYFHPEWFVKYAIELLGEDGALKLMKANLRNPPTYVRVNE 183 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAP-VHALPGFEDGWVTVQDASAQGCM 239 S +S L++ G+ + R++ +L +G +QD ++ Sbjct: 184 LKGSVESVREYLEKNGVILEET-FLDEVFRVKGYEKHPASLDWHSEGKYVIQDLASCFVS 242 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L P G+ ++DL AAPG KT H+ + E ++VAVD R+ R+ LK+LG+K Sbjct: 243 HALNPSPGDVVIDLAAAPGMKTAHMAMLMQNEGRIVAVDNSPSRVRRMRSKLKQLGVKNV 302 Query: 299 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 +K GDG E + D+ L+DAPCS+TG P++KW +R ++Q +++ Sbjct: 303 EIKLGDGC-----VFECEADKALVDAPCSSTGNYASQPNVKWTFDERKFRATMKVQRKMI 357 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG--------- 408 L+ +VYATCS+ EEN L+ A++ +P G Sbjct: 358 ANA---LRNADEVVYATCSITFEENEEN---LLKT--GAKILPLPSPFGRGVREFRGVLF 409 Query: 409 ------KQNLPGAEEGDGFFYAKLIK 428 ++ P + GFF +KL + Sbjct: 410 RDWEKVVRSFPHLHDTAGFFISKLTR 435 >UniRef50_A7HSA7 Fmu (Sun) domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HSA7_PARL1 Length = 433 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 112/442 (25%), Positives = 174/442 (39%), Gaps = 42/442 (9%) Query: 9 SMAAQAVEQVVEQGQSLSNILP---PLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 A + + + G+ + + KD+A + +L F VLR ++L + Sbjct: 8 QSAISVLSDIFKSGRPADRVFDTWARSNRYAGSKDRAAVSDLVFTVLRRRAELTAAVGSD 67 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQL-KGLINGVLRQ 124 AR + + +G Q + AALA+ A P+ L VL Sbjct: 68 DARLLAF------AALTLGAEQ----GVDEVAALADGARHAPEPLSPEEQTALSMAVL-- 115 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 E R+ +P WL + A+ + + A +R P LR+N Sbjct: 116 --------PGESAPPWTRFNYPEWLHPEFEAAFGNGLEREMAAFMERAPTDLRVNTLKMK 167 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 R+ LA L G+ P +RL + V L F DG V +QD +Q Sbjct: 168 REKALAALTGEGLSAEATPWSPWGLRLTSRGNVLGLATFRDGIVEIQDEGSQLACLLAGA 227 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 GE ++DLCA GGK+ + + Q+ A D D +RLS + ++R G++ + Sbjct: 228 APGEQVVDLCAGGGGKSLALAAMMKNHGQIYACDTDARRLSGLTPRVRRAGIRNLQTRVL 287 Query: 304 GRYPSQWCGEQ------QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 G + + D +L+DAPCS TG RR P +W + Q+E+L Sbjct: 288 GPFTPDMADKDLAGLASHADCVLVDAPCSGTGAWRRSPGARWSLSPEMLMGYRAAQAEVL 347 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT-----------PEQ 406 ++ GG LVY TCS+LP EN Q++AFL + P Sbjct: 348 TRGARLVRPGGRLVYVTCSLLPSENETQVEAFLAVHPAFTPQPWASNWPEHVPLPPAPHG 407 Query: 407 PGKQNLPGAEEGDGFFYAKLIK 428 + P + DGFF A L + Sbjct: 408 NWLRLTPASTGTDGFFVAILRR 429 >UniRef50_C0W1K3 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1K3_9ACTO Length = 487 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 115/461 (24%), Positives = 198/461 (42%), Gaps = 44/461 (9%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R++A + + +V + + +LP + + +D + EL +G LR L+++DW+I + Sbjct: 30 ARTVAFETLLKVDVEDAYANIVLPKAITEANLDSRDASFATELVYGTLRNLARVDWVIEQ 89 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 M + + V ++ + +Q+L+ R+P HAA+AE+VE + ++ +NGV R Sbjct: 90 CMPKKIADLDPEVRAILRLTAHQILHLRVPDHAAVAESVELTKHVAGFGVEKFVNGVARA 149 Query: 125 F--------QRQQEELLAEFNASDARYLHPSWLLKRLQKAY------PEQWQSIVEANNQ 170 +R+ + + A Y HP W+++ +A P++ ++++A+N Sbjct: 150 MVEHTPGEWERRIKTIDANVTRVSVLYSHPEWIVRAFAQALQAHGRNPKELTALLKADND 209 Query: 171 RPPMWLRINRTHHSRDSWLALLDE-AGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 P + L + + P A +V + P L G Sbjct: 210 NPKVMLCARPGQILPVELADDAERYLDAEVAPGAYSEWSVAITHGDP-GKLAAVCHGAAA 268 Query: 230 VQDASAQGCMTWLA----PQNGEHILDLCAAPGGKTTHILEVAP--EAQVVAVDIDEQRL 283 VQD +Q + LA + LD+CA PGGK + A A ++A ++ R Sbjct: 269 VQDEGSQLVASALAELDLANDNGKWLDMCAGPGGKAGLVAAYAQLAGATLLANEVSAHRA 328 Query: 284 SRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 V ++ V GDGR ++ + +F RI+LDAPCS G +RR P+ +W R+ Sbjct: 329 HLVEQTVREFD-NVEVIVGDGRKIAE---KGKFSRIILDAPCSGLGALRRRPESRWRRQP 384 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT---------- 393 D+ L +LQ+E+L+A L+ G L Y TCS E QI+ R Sbjct: 385 NDLNGLIKLQAELLEAGIDALEKDGVLAYITCSPHESETVKQIQRIAGRDDIKILDSKAA 444 Query: 394 ------ADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 ++ EL T Q P D F + K Sbjct: 445 VEKVSMSEIELSATPIGNGNSVQLWPHLHTTDAMFLCLIQK 485 >UniRef50_C7N543 tRNA/rRNA cytosine-C5-methylase n=2 Tax=Slackia RepID=C7N543_SLAHD Length = 531 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 118/445 (26%), Positives = 199/445 (44%), Gaps = 26/445 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQLDW 60 R A + V E+ +S ++P + ++ +D A L GV+ T LD Sbjct: 93 ASPARIAACLSCRIVRERDAFVSEVVPGVVSRMGPMKPEDVAFATRLARGVVATSGALDD 152 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 IN+ + P Q V + V Y+LLY + + A+ + VE A P+ + L N Sbjct: 153 FINRNLYSP-ADIQPNVRDALRVSAYELLYLKKDDYVAVDQGVELV-AYVEPKARALANA 210 Query: 121 VLRQFQRQQEELL-----AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 VLR+ R + A + PSW+ KRL + EQ + +EA+N P+ Sbjct: 211 VLRKMARTASRWPFGDVGTDVVALSRKVAFPSWMAKRLVEEMGREQAAAFMEASNGDAPV 270 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHA---LPGFEDGWVTVQ 231 +N + + LA+L E G P +R+ TP + + FEDG V + Sbjct: 271 HAAVNAIRATDEEVLAVLQEQGADPNLVEGIPGCIRIGTPKAIRSDVVTKLFEDGKVLIS 330 Query: 232 DASAQGCMTWLAP-QNGEHILDLCAAPGGKTTHILE-----VAPEAQVVAVDIDEQRLSR 285 D SAQ ++ P + +++ + G KT + + +V+VD + Sbjct: 331 DPSAQKVASFALPGEPPSAFIEVGSGRGTKTVLMQSNAMRKYGKQFPIVSVDDHPFKAKL 390 Query: 286 VYDNLKRLGMKATVK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 + + + G+ + DGR + + FD + +DAPCS G +RRHP+I+W +R Sbjct: 391 LRNRAREYGLTSVQTKVADGRKLTSLYEKGSFDAVFVDAPCSGVGTLRRHPEIRWRLTER 450 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP 404 D+ ++A +Q +IL +KTGG +VY+TC+V EEN ++ FL+ T Sbjct: 451 DVAKMADVQLDILIDAASLVKTGGQVVYSTCTVFREENERVVERFLKTKFGERFEMTEML 510 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIKK 429 + +++ P D F +L K+ Sbjct: 511 KMSLEEDGP-----DAHFAVRLTKR 530 >UniRef50_D1Y2M1 Fmu n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2M1_9BACT Length = 439 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 116/430 (26%), Positives = 186/430 (43%), Gaps = 16/430 (3%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 AA + + V++G +S L L +VS D+ L L + ++R LS + L K + Sbjct: 14 AAMYLWRQVDKGGIVSESLRTLGDRVSPPDRTLAASLAYALVRRLSLWEHLREKFLLPRP 73 Query: 71 TGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE 130 ++V +++G L A L ++ + P+ ++N VLR+ + Sbjct: 74 EKFSQSVRAAVLMGAAGLTELEKFAPAVLISSLIEWTKTRDPRGARVVNAVLRRVLEEGP 133 Query: 131 ELLAEFNASDARYLH------PSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINRTHH 183 L D+ PSW+ +R ++ Y + +VE N + LR++ Sbjct: 134 AELQRLRDDDSLDSLCLLSGVPSWVGERWRRDYGPAVGRRLVEQNAGGSSLSLRLSPD-- 191 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 + LL+ AG PD +RL A ALPG+ +GW T Q S+ T A Sbjct: 192 APRDLPQLLEAAGQTVEESP-LPDGLRLAGTALPSALPGYREGWFTPQSESSILVGTEAA 250 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 G +LD+CA G KT I ++ P+ V A D+ + R++ ++RL + V Sbjct: 251 DFEGARLLDMCAGRGVKTGQIAQLRPDIAVEAWDLSKGRVAAGVREMERLKLSGRVVMRA 310 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 G D IL+DAPCS +G RRHP+ KW ++ EL +LQ +L + Sbjct: 311 GSALELEPLGAP-DAILVDAPCSGSGTWRRHPEGKWRLSPENLEELTELQYRLLCRAFSL 369 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP-----GKQNLPGAEEG 418 +K GG +VY+TCS+L EN ++ L+ + G P Sbjct: 370 VKKGGKVVYSTCSLLAAENEEVVEKALRAFPEISERPLSADFGGIACGRGGVLTPENPWT 429 Query: 419 DGFFYAKLIK 428 DGF+ A K Sbjct: 430 DGFYLAAFSK 439 >UniRef50_A6FYF2 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYF2_9DELT Length = 453 Score = 321 bits (824), Expect = 3e-86, Method: Composition-based stats. Identities = 119/448 (26%), Positives = 200/448 (44%), Gaps = 33/448 (7%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLI 62 N R +A + + ++ ++ + IL ++ + +D+ L+ L +GVLR +LD + Sbjct: 12 NPRRLAVRTLREIEQRQGFSNRILSEQLERFPDLDPRDRGLITTLVYGVLRHRGRLDAHL 71 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIP-PHAALAETVEGAIAIKRPQLKGLINGV 121 + +P + + ++ V Y++L P P A+ + R +LKG+I + Sbjct: 72 DAAADKP-HKLKGELRTILRVAAYEVLELDRPLPIASAEASKAAKRIDPRGRLKGMIAKI 130 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINR 180 L + + + +L A R+ P+WL++R + ++ A + P + LR++ Sbjct: 131 LAKVAKDKADLDARLRPGQ-RWSLPAWLVERWSAQLGAEGLEARARALTEVPSVDLRVDL 189 Query: 181 THHSRDSWLALLDEAGMKG------FPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 + +RD+ L D P +R+ + P FEDG + +Q Sbjct: 190 SRSTRDAVREQLVADHPSVRFVELPEAAGDQPQCLRVRGGGDLFHGPLFEDGLIAIQSLG 249 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRL 293 +Q + L PQ GE LD CA G KT I E + +VA D +RL + + R Sbjct: 250 SQQAVRVLDPQPGERTLDACAGMGTKTIQIAEHMGRRGALVASDASAERLDEL-ERSARA 308 Query: 294 -------GMKATVKQGDGRYP------SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL 340 G+ V D P E FD +LLDAPC+ G + RHP+++W Sbjct: 309 RIELDADGIALQVVHADLAGPELPAELDAPPDEAGFDAVLLDAPCTGLGNLARHPELRWT 368 Query: 341 RRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE 400 + D+ E A LQ+ +L+ ++ GG LVYA CS+ PEE + AFL A A + Sbjct: 369 SQASDVLERAGLQASLLERCAAWVRPGGRLVYAVCSLEPEEGPAIVDAFLATEAGAAFEQ 428 Query: 401 TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 T P A+ DGF+ A+L + Sbjct: 429 TKREAWT-----PEAQRSDGFWLARLDR 451 >UniRef50_A3TLN6 Putative RNA-binding Sun protein n=2 Tax=Actinobacteria (class) RepID=A3TLN6_9MICO Length = 500 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 120/475 (25%), Positives = 198/475 (41%), Gaps = 56/475 (11%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDW 60 K +AA + + V+ G + P + + K+ +D A EL FG LR D Sbjct: 33 KHAEPARLAAYTLLRAVDDGAYANLEFPAIIRRHKLDSRDAAFATELAFGTLRMQGFYDA 92 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 +I + R + V ++ +G +QLL R+P HAA +TV A + G +N Sbjct: 93 VIERAADRSTSTIDSGVLDVLRLGAHQLLGMRVPTHAAADQTVGLARTVSGAGASGFVNA 152 Query: 121 VLRQF-QRQQEELLAEF-------NASDARYLHPSWLLKRLQKAY-----------PEQW 161 V+R+ +R +EE + + A Y HP W++ L+ A + Sbjct: 153 VMRRISERTREEWVTQVVPEGGSTAALAVEYSHPEWVVSALRGALLTGGRATAETVDGEL 212 Query: 162 QSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALP 221 + +++++N + L + D + A P LE P A+ Sbjct: 213 RELLDSDNIPAKVSLVARPGLATVDELVDA------GATASATSPFGAVLEHGEP-GAIA 265 Query: 222 GFEDGWVTVQDASAQGCMTWLAPQNGE-----HILDLCAAPGGKTTHILEVA--PEAQVV 274 D VQD +Q LA + LDLCA PGGK+ + +A +A +V Sbjct: 266 AIRDRRAAVQDEGSQLLSAALAMAPVDSDVPHRWLDLCAGPGGKSGVLGALAVEADADLV 325 Query: 275 AVDIDEQRLSRVYDNLK-------RLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSA 327 AV+I + R V L+ G + V+ DGR + + R+L+DAPC+ Sbjct: 326 AVEISDHRADLVRSTLEPVIALARAAGRRIEVRTTDGREVGE-AEPAAYGRVLVDAPCTG 384 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 G +RR P+ +W R+ D+ +L LQ ++L + + GG + YATCS P E + ++ Sbjct: 385 LGALRRRPEARWRRQPSDLVQLGPLQRDLLRSALDAVAPGGLVGYATCSPHPAETTFVVR 444 Query: 388 AFLQRTADAELCET-------------GTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 L++ D ++ + + P Q P D F+ L KK Sbjct: 445 DVLKKRDDIDVVDAREFFRDASGEVLHDLGDGPSVQLWPHVHGTDAMFFTLLRKK 499 >UniRef50_A4IGA8 Si:dkey-91i17.1 protein (Fragment) n=21 Tax=Eukaryota RepID=A4IGA8_DANRE Length = 676 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 155/341 (45%), Gaps = 36/341 (10%) Query: 121 VLRQFQRQQEELLAEFNASDA-------RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 VL F ++EE Y + +L+ +L + + +EAN Sbjct: 247 VLSNFNEKREEGKERSEYLSLLRADLCTYYSYNQFLISKLMDLFSLSELIDFLEANEVHR 306 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDA--VRLETPAPVHALPGFEDGWVTV 230 P+ +R N R L G+ P + V ++ P+ A P + G + Sbjct: 307 PVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLAGHYML 366 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 Q AS+ + L+PQ GE +LD+ AAPGGKTT++ ++ +VA D + RL V N Sbjct: 367 QGASSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANVDRLKSVVGN 426 Query: 290 LKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 + RLG+ V DGR + G FDR+LLDAPCS TGVI + P +K + + DI Sbjct: 427 IHRLGVTNAVICNYDGRQFPKVMGG--FDRVLLDAPCSGTGVISKDPAVKTGKDEADILR 484 Query: 349 LAQLQSEILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP 404 A LQ E++ + + +TGG LVY TCS++ EEN + L++ + +L TG Sbjct: 485 SAHLQKELILSAIDSVNADSQTGGYLVYCTCSIMVEENEWVVDYALKKR-NVKLVPTGLD 543 Query: 405 EQP-----------------GKQNLPGAEEGDGFFYAKLIK 428 ++ P + DGFF AKL K Sbjct: 544 FGKEGFTRFKEKRFHPSLKLSRRFYPHSHNMDGFFVAKLKK 584 >UniRef50_Q0BWV2 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BWV2_HYPNA Length = 423 Score = 320 bits (821), Expect = 6e-86, Method: Composition-based stats. Identities = 132/440 (30%), Positives = 195/440 (44%), Gaps = 34/440 (7%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNIL--PPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 +R A + + V+++ ++L + L + D+A + + LR L +D Sbjct: 2 SGAPIRLAAGRLLNLVLDKKRTLDDALATDDAYNNLDGSDRAFARAIASSALRHLGWIDR 61 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKG-LIN 119 ++ ++RP++ + LI G Q+ + +P HAA++ETVE A + G +N Sbjct: 62 GVSPFLSRPLSATGAEIRALIRAGAAQIWFMDVPHHAAVSETVEAARLWSPARSGGGFLN 121 Query: 120 GVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRIN 179 LR+ E + L P WL RL AY + + + P Sbjct: 122 AALRRVT----ESESPAATISPLALWPDWLASRLGSAYGREAAEALALSQLEEP------ 171 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 H S A + EA PD V LPG+ G VQDA+A+ Sbjct: 172 SLHLSPKGDGARVAEA----TGGTLLPDGAIDIVSGAVETLPGYAAGDWWVQDAAARIPA 227 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L+PQ GE ILDLCAAPGGKT + + V A+D RL R+ +NL R G+ A V Sbjct: 228 QLLSPQTGERILDLCAAPGGKTLQLAAAGAD--VTALDRSRPRLERLKENLARTGLHAEV 285 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 DG W F +ILLDAPCSA G +RRHP+ W++ + D+ +Q+ +L A Sbjct: 286 IIADG---EAWAPPALFPKILLDAPCSALGTLRRHPESAWIKTEDDVARFPGVQARLLAA 342 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQ--------- 410 L GGTLVY C+ +P E ++A + + E PG + Sbjct: 343 AAGMLAPGGTLVYCVCTPVPAEGVDIVEAAIGK-GILTRSPVKAEEIPGFEAALTPAGDV 401 Query: 411 -NLPGAEE-GDGFFYAKLIK 428 LPG D F+ A+LIK Sbjct: 402 LTLPGTGGKHDAFYIARLIK 421 >UniRef50_UPI000194B9ED PREDICTED: nucleolar protein 1, 120kDa n=1 Tax=Taeniopygia guttata RepID=UPI000194B9ED Length = 778 Score = 320 bits (820), Expect = 8e-86, Method: Composition-based stats. Identities = 107/336 (31%), Positives = 158/336 (47%), Gaps = 30/336 (8%) Query: 120 GVLRQFQRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 GV R+ R ++E LA A Y + +LL +L +P + + +EAN P+ +R Sbjct: 350 GVRREEGRSRQEYLALLRRDMAAYYSYSDFLLAKLMDIFPLPELINFLEANEVPRPVTIR 409 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYP--DAVRLETPAPVHALPGFEDGWVTVQDASA 235 N R L G+ P + V ++ P+ A P + G +Q AS+ Sbjct: 410 TNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSTVPIGATPEYLAGHYMLQGASS 469 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLG 294 + LAPQ E ILD+C APGGKT++I ++ ++A D +RL V NL RLG Sbjct: 470 LLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSSAERLRSVVGNLHRLG 529 Query: 295 MKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + V DGR + G FDR+LLDAPCS TGVI + P +K + ++DI A LQ Sbjct: 530 VTNAVVSNCDGRQFPKVIGG--FDRVLLDAPCSGTGVISKDPAVKTNKDEKDIQRCAHLQ 587 Query: 354 SEILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG- 408 E++ + + +TGG +VY TCS++ EEN + L++ + L TG Sbjct: 588 KELILSAIDSVNAASETGGYIVYCTCSIMVEENECVVDYALKKR-NVRLVATGLDFGKEG 646 Query: 409 ----------------KQNLPGAEEGDGFFYAKLIK 428 ++ P DGFF AK K Sbjct: 647 FTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKFKK 682 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Query: 120 GVLRQFQRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 GV R+ R ++E LA A Y + +LL +L +P + + +EAN P+ +R Sbjct: 92 GVRREEGRSRQEYLALLRRDMAAYYSYSDFLLAKLMDIFPLPELINFLEANEVPRPVTIR 151 Query: 178 INRTHHSRDSWLA 190 N R Sbjct: 152 TNTLKTRRRDLAQ 164 >UniRef50_Q022D6 NusB/RsmB/TIM44 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022D6_SOLUE Length = 360 Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 130/423 (30%), Positives = 183/423 (43%), Gaps = 77/423 (18%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R A ++ V E G S++L + +D L E+ FGVLR +QLD+LI Sbjct: 6 ARIAAFDILQLV-ESGGYASDLLLARTADLDSRDAGLASEIVFGVLRYRAQLDFLIIHYA 64 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 R V + + +YQ+ Y R+PPHAA+ E+VE ++ G +N +LRQ Sbjct: 65 GRS-RKLDPEVRTALRMAIYQIRYLERVPPHAAVKESVELVKRARKTSAAGFVNAILRQV 123 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R + A + Y P WLL R ++ Y E Sbjct: 124 DRDP----VIWPAREIEYSCPEWLLARWEREYGETA------------------------ 155 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 G+ + VR+ T QD AQ + L Q Sbjct: 156 --------ALGIAQAALREPEKYVRIGTAGERT------------QDIGAQSIVPLLDLQ 195 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 G+ LDLCAAPG KT LE +A VA D+ RL ++ + + DG Sbjct: 196 PGQRFLDLCAAPGNKTAQALEAGVQA--VACDLHFHRLVQLKP------LTPNLVVVDGT 247 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 P + +FDRIL+DAPCS TG + R+P+IKW D+ +L QS +L L Sbjct: 248 RPLPFA--ARFDRILVDAPCSGTGTLGRNPEIKWRLTPADLADLHARQSALLANALSLLA 305 Query: 366 TGGTLVYATCSVLPEENSLQ-IKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYA 424 GGTLVY+TCS+ PEEN ++A ++RT +Q LPG E GDGF+ A Sbjct: 306 PGGTLVYSTCSLEPEENEGVAVQARVERT---------------EQRLPGREAGDGFYAA 350 Query: 425 KLI 427 + Sbjct: 351 VIK 353 >UniRef50_Q0BRA0 16S rRNA m(5)C 967 methyltransferase n=12 Tax=Acetobacteraceae RepID=Q0BRA0_GRABC Length = 452 Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 141/443 (31%), Positives = 197/443 (44%), Gaps = 51/443 (11%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R A + + V+EQ +SL L L + +D+A L LR L +D ++ + Sbjct: 35 TRDAACRLLNAVLEQHRSLEEALNAL-PPMEPRDRAAAHRLAAATLRRLGTIDAVLEPFL 93 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 R V ++ +G LL+ PPHAA+ V+ A ++ GLIN VLR+ Sbjct: 94 RREPPAP---VRDILRLGAAGLLFLDTPPHAAVGTAVDLARQLRLAPFTGLINAVLRKVA 150 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 +E+L + R P WL ++I A+ P+ L + Sbjct: 151 TGGQEMLNGLD--SPRLDTPGWLWTAW----GRDARAIALAHQTEAPLDLTLRPGITPPA 204 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 + LL +RL V LPGFE+G VQDA+A LA + Sbjct: 205 EGI-LLPN------------GTIRLPPGTRVSILPGFEEGAFWVQDAAASLPARLLAARE 251 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 GE I+DLCAAPGGKT + A+V+AV+ + R+ R+ +NL RL + V D Sbjct: 252 GEKIVDLCAAPGGKTAQLA--MSGAEVIAVEREAVRVPRLRENLARLRLDVQVAVADA-- 307 Query: 307 PSQWCGEQQF--DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 ++W F D ILLDAPCSATG IRRHPD+ L+R RDI L Q +L A L Sbjct: 308 -AEWTPPAGFVPDAILLDAPCSATGTIRRHPDVPHLKRQRDITALTAQQDRLLAAALAML 366 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE---QPGKQNL--------- 412 + GG L+YA CS+ PEE +I+ L+ L E PG + Sbjct: 367 RPGGRLIYAVCSMQPEEGRQRIEHALKTLPSVTLSPFTVEELAFLPGARTAEGYLRTHPG 426 Query: 413 ---------PGAEEGDGFFYAKL 426 P DGFF A+L Sbjct: 427 LAFAGPEGSPPITGMDGFFAARL 449 >UniRef50_D2L7S0 NusB/RsmB/TIM44 n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7S0_9DELT Length = 451 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 116/454 (25%), Positives = 184/454 (40%), Gaps = 47/454 (10%) Query: 7 LRSMAAQAVEQVV---------------EQGQSLSNILPPLQQKVSDKDKALLQELCFGV 51 R +A + +V + +L L + + +D+ L EL +G Sbjct: 12 ARKLALAVLGRVFPAKGAARGPGPGGGQDVQAALDTALAGT-KGLDPRDRGLATELVYGY 70 Query: 52 LRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIK 110 LR ++DW++++ + +P V ++ + +Y++LY +R+P +A++ V + Sbjct: 71 LRLCGRIDWMLSRFLKKP-EAVPLPVRRVLGLAVYEILYCSRVPAYASVDWAVSAVRRLS 129 Query: 111 RPQLKGLINGVLRQFQRQQEELLA----------EFNASDARYLHPSWLLKRLQKAY-PE 159 L G+ N VLR+ + L E Y P W++ + + P Sbjct: 130 GKGLGGMANAVLRRVAADPKALDDPEFYCPDRCDEATYLSRYYSCPEWIVGLWLRDFGPT 189 Query: 160 QWQSIVEANNQRPPMWLRINRTHHSRDSW---LALLDEAGMKGFPHADYPDAVRLETPAP 216 + + A + P+ LR+NR+ + LA L + FP P L Sbjct: 190 DTRLYLAAQVEAAPLGLRVNRSRPDARALFDALAALPGVRLADFPTLAVPAGTDLAAAG- 248 Query: 217 VHALPGFEDGWVTVQDASAQGCMTWLA-PQNGEHILDLCAAPGGKTTHILEVAPEAQVVA 275 V +G ++ Q A AQ ++ L E + D CA GGK + E V A Sbjct: 249 VDMGAALAEGRLSRQSAGAQQILSRLGLADWPEPVFDACAGRGGKALFLAEAGKR--VFA 306 Query: 276 VDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH 334 D+ +L+ + RLG+ + ILLDAPCS GV+ R Sbjct: 307 GDMHATKLAGLRKETLRLGLPPVAAFRASATRMPLLSPPGT---ILLDAPCSGLGVLSRR 363 Query: 335 PDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 PD KW R D+ L +LQ +L+A + L GG LVY TC+V P EN I R Sbjct: 364 PDAKWRREPEDLAGLVRLQGAMLEAAYAALPPGGRLVYVTCTVNPAENEQAIDRLGNRHR 423 Query: 395 DAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + L ET P P G+ F+ A L K Sbjct: 424 NL-LLETEAPVA------PDTALGEVFYGAVLRK 450 >UniRef50_Q6A8H0 TRNA/rRNA cytosine-C5-methylase n=3 Tax=Propionibacterium acnes RepID=Q6A8H0_PROAC Length = 458 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 119/455 (26%), Positives = 181/455 (39%), Gaps = 39/455 (8%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLD 59 +K R +A A+ V G + L + K++ +D A EL G R D Sbjct: 10 RKADPARRLAYSALLAVETHGAYANLALADHLRAAKLTGRDAAFATELVDGTSRGTGTWD 69 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I R Q V ++ + +Q+L R+P AA+A +V+ A + ++ GL+N Sbjct: 70 RIIEAASCRAPAKLQPGVRVVLRMAAHQILAMRVPTRAAVASSVDLAGQVIGERVTGLVN 129 Query: 120 GVLRQFQRQQ-EELLAEFNASDA------RYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 + R+ EE E DA R LHP+W++K Q ++ + + A+N+ Sbjct: 130 AISRRISTHSLEEWATEIGGRDAVDVMALRTLHPTWIVKAFQDRLGADEVEDALLADNEP 189 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P L + RD G P P V P + +G +Q Sbjct: 190 PVPTLVVRPGLAQRDEL--------GSGTPTRYSPWGVV--RPGNPSDVAAVREGRAGIQ 239 Query: 232 DASAQGCMTWL--APQNGE---HILDLCAAPGGKTTHILEVAP--EAQVVAVDIDEQRLS 284 D +Q + L A + LDLCA PGGK+ + +A + + AV++ E R Sbjct: 240 DEGSQLVILALVRAAKANSCFGQWLDLCAGPGGKSALLAGLANQHDTSLTAVELHEHRAD 299 Query: 285 RVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 V L+ + V DG +P +Q F +L D PCS G +RR P+ +W R Sbjct: 300 LVSKALRTIPGDHRVMTADGTHPP--LPKQSFAAVLADVPCSGLGSLRRRPEARWRRTPT 357 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA-DAELCETGT 403 D+ EL QLQ +L + + GG + Y TCS E I + D Sbjct: 358 DVEELTQLQRRLLISAVNLTRPGGVIGYVTCSPHRAETIDIINSACATLPVDVLDAPAML 417 Query: 404 PEQPG---------KQNLPGAEEGDGFFYAKLIKK 429 P P Q P D F A L K+ Sbjct: 418 PNIPNIAASGNTNTIQLWPHRHGTDAMFCALLRKR 452 >UniRef50_UPI00015B4FE9 PREDICTED: similar to CG8545-PA n=2 Tax=Neoptera RepID=UPI00015B4FE9 Length = 796 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 100/334 (29%), Positives = 157/334 (47%), Gaps = 30/334 (8%) Query: 122 LRQFQRQQEELLAEFNASDARY-LHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 LRQ R + E L Y + S+L+++L + +P + +E++ + PM +R N Sbjct: 418 LRQPDRSRSEYLELLKTDLCTYFSYNSFLMEKLMQMFPLSELLEFLESSEVQRPMTIRTN 477 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDA--VRLETPAPVHALPGFEDGWVTVQDASAQG 237 R L G+ P + + V + P+ A P + G +Q AS+ Sbjct: 478 TLKTRRRDLAHALINRGVNLDPIGKWTNVGLVVYSSQVPMGATPEYLAGHYILQGASSFL 537 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK 296 + L P+ E ILD+CAAPGGK++HI + + + D+++ R+ V N RLG+ Sbjct: 538 PVMALEPKINERILDMCAAPGGKSSHIAALMKNTGVLFSNDVNKDRIKAVIGNFHRLGIT 597 Query: 297 ATVKQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 +V DGR FDR+LLDAPC+ TGV+ + P +K + + DI LQ E Sbjct: 598 NSVICSYDGRKLPSVIKG--FDRVLLDAPCTGTGVVAKDPSVKTNKDEVDIQRCCTLQRE 655 Query: 356 ILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG--- 408 +L A + ++GG +VY+TCS+LPEEN + L++ D ++ TG Sbjct: 656 LLLAAIDSVNARSESGGIIVYSTCSILPEENEWIVDYALRKR-DVKVVPTGLEFGADGFT 714 Query: 409 --------------KQNLPGAEEGDGFFYAKLIK 428 K+ P DGF+ AKL K Sbjct: 715 NYRQHRFHPSLKLTKRFYPHMHNMDGFYVAKLKK 748 >UniRef50_D2B6M0 Fmu, rRNA SAM-dependent methyltransferase:Nop2p n=2 Tax=Actinomycetales RepID=D2B6M0_STRRD Length = 515 Score = 317 bits (813), Expect = 5e-85, Method: Composition-based stats. Identities = 120/473 (25%), Positives = 189/473 (39%), Gaps = 63/473 (13%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R+ A + V E+ + ++P L + ++S +D L EL +G LR L D +I Sbjct: 56 ARNAAYDLLRAVDERDAYANLLMPALLRERRLSGRDAGLATELAYGTLRGLGTYDEVIAA 115 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 R + I +G++QLL TR+PPHAA+ TV+ N VLR+ Sbjct: 116 CSDRAPEDLDPPLLDAIRLGVHQLLKTRVPPHAAVGTTVDLVRLRVGTGASKYANAVLRK 175 Query: 125 FQ-RQQEELLAEFNAS---------DARYLHPSWLLKRLQKAYP---EQWQSIVEANNQR 171 R E+ L + HP W++ ++ A ++ +++ A+N+R Sbjct: 176 VAGRSLEQWLPIVAPDAGEDPVGYLAVAHSHPRWIVTAMRDAVGGDFDETAALLAADNER 235 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P + L S D LA P A L P ++ + VQ Sbjct: 236 PRVTLVARPGRASVDELLAS------GAQRAEYSPYAAYLTEGDP-GSIRAVAEARAAVQ 288 Query: 232 DASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEVA------------------- 268 D ++Q L LDLCA PGGK + +A Sbjct: 289 DEASQLVALALTRVPVAGGDTRWLDLCAGPGGKAGLLDAIAVHGGGAGLPDGASGGSPGP 348 Query: 269 ----PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP 324 A ++A ++ R V + +A V DG P+ FDR+++DAP Sbjct: 349 VGFPGGANLLAAELQYHRARLVRQTTR----EAAVITADGTAPA--WRPGVFDRVMVDAP 402 Query: 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSL 384 C+ G +RR P+ +W R R +P+L +LQ E+L + ++ GG + Y TCS E + Sbjct: 403 CTGLGALRRRPEARWRRDPRSLPDLGRLQRELLTSALEAVRPGGVVAYVTCSPHLAETAT 462 Query: 385 QIKAFLQRTADAELCE--------TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + L+ D E + G E P Q P DG F A L ++ Sbjct: 463 VVGDVLRGRDDVETLDARAYLPEVAGLGEGPHAQFWPHRHGTDGMFLALLRRR 515 >UniRef50_A9LZZ8 SUN-family protein n=29 Tax=Betaproteobacteria RepID=A9LZZ8_NEIM0 Length = 419 Score = 317 bits (812), Expect = 8e-85, Method: Composition-based stats. Identities = 113/444 (25%), Positives = 188/444 (42%), Gaps = 61/444 (13%) Query: 12 AQAVEQVVEQGQSLSNILPP---LQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 A+ + +++ Q +L +K+ +D+ + E F LR + I+ + R Sbjct: 11 AKVLAEMLTFKQPADAVLSAYFREHKKLGRQDRHEIAETAFAALRHYQK----ISTALRR 66 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 P ++ +++G + Q+K L + Sbjct: 67 PHAQPRKAALAALVLG----------------------RSTNISQIKDL-------LDEE 97 Query: 129 QEELLAEFNASDARYL--------HPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRIN 179 + E L A + P WL+++LQ+ + E+ + + NQ P+ +R+N Sbjct: 98 ETEFLGNLKARKTEFSDGLNTAAELPQWLVEQLQQHWNEEEILAFGRSINQAAPLDIRVN 157 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 RD L LL P +RL+ ++ F DG + VQD +Q Sbjct: 158 TLKGKRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLA 217 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 + + GE I+D CA GGKT I ++A + ++ A DI E+RL+ + + R G+ Sbjct: 218 LLVGAKRGEIIVDFCAGAGGKTLAIGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI 277 Query: 299 ----VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + ++ G+ DR+L+DAPCS G +RR+PD+K+ + + L + Q Sbjct: 278 HPERISSEHDTRIARLAGKA--DRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH 335 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC---------ETGTPE 405 ILDA +K G LVYATCSVLPEEN LQ++ FL + E + Sbjct: 336 SILDAASKLVKPQGRLVYATCSVLPEENELQVERFLSEHPEFEPVNCAELLQSLKVDLDT 395 Query: 406 QPGKQNLPGAEEGDGFFYAKLIKK 429 + + DGFF A L +K Sbjct: 396 GKYLRLDSARHQTDGFFAAVLQRK 419 >UniRef50_Q16QI0 Ribosomal RNA small subunit methyltransferase b (Sun) n=2 Tax=Culicini RepID=Q16QI0_AEDAE Length = 812 Score = 316 bits (811), Expect = 8e-85, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 143/318 (44%), Gaps = 29/318 (9%) Query: 137 NASDARYLHPSWLLKRLQKAY-PEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEA 195 Y + + ++ L K + P + +EA+ + P+ +R N R L Sbjct: 302 KDLCIYYSYNEFFMQLLLKLFSPNELLEFLEASEVQRPLTIRTNSLKTRRRDLAQALINR 361 Query: 196 GMKGFPHADYP--DAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDL 253 G+ P + V + P+ A P + G +Q AS+ + L P+ E ILDL Sbjct: 362 GVNLDPIGKWSKEGLVVYTSQVPLGATPEYLAGHYMIQGASSMLPVIALGPEENERILDL 421 Query: 254 CAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG-DGRYPSQWC 311 CAAPGGK++HI + + A D+++ RL V N RLG++ + DG Sbjct: 422 CAAPGGKSSHIAALMKNTGVLFANDVNKDRLQAVVGNFHRLGIQNAIVTSIDGTKYRDVM 481 Query: 312 GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL----KTG 367 FDR+LLDAPC+ +GVI + P +K + D DI LQ ++L L +TG Sbjct: 482 TG--FDRVLLDAPCTGSGVISKDPSVKTTKTDVDIQRCYNLQRKLLLTAIDCLSANSETG 539 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG-----------------KQ 410 G LVY+TCS+LP+EN + L++ + L TG ++ Sbjct: 540 GYLVYSTCSILPQENEWVVDYALRKR-NVRLVSTGLDFGNEGFVNFAGQKYHPSMKLTRR 598 Query: 411 NLPGAEEGDGFFYAKLIK 428 P DGFF AKL K Sbjct: 599 FYPHTFNMDGFFVAKLQK 616 >UniRef50_A9BNV4 Fmu (Sun) domain protein n=2 Tax=Comamonadaceae RepID=A9BNV4_DELAS Length = 470 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 112/444 (25%), Positives = 184/444 (41%), Gaps = 39/444 (8%) Query: 12 AQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 A+ V++ + ++ + + +++A L E + VLR L+ + +AR Sbjct: 39 AELVKRTLTFEHPADAVVSRFFRENRNLGPRERAALAETAYTVLRKK-----LLFESLAR 93 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHA--ALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +G + ++ Q R+ + + E + A A PQ ++ Sbjct: 94 SGSGSRERRLAILGFAHSQEALARVAGKSEQGVKEALGFARAALSPQELQWLDAC----- 148 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 + + + R+ P WL+ L++ E + + ++ Q P+ LR+N + R Sbjct: 149 ---DAVRPDELMEPHRHNLPEWLVAPLKQQLGEDFWAFAQSMEQAAPLDLRVNALNAKRA 205 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 L +AG+ P +R++ + L F G + VQD +Q L + Sbjct: 206 DVQKELADAGIAAEATPYSPWGLRVQGKPALARLDAFTRGAIEVQDEGSQLLALMLDAKR 265 Query: 247 GEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 GE ++D CA GGKT I + ++ A D+ RL + L R G+ Sbjct: 266 GEMVVDFCAGAGGKTLAIGASMRSTGRLYAFDVSGHRLEALKPRLARSGLSNVHPAAIAH 325 Query: 306 YPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 + DR+L+DAPCS G +RR+PD+KW + + I EL Q Q+ IL + Sbjct: 326 ERDDRVKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQSAKAIEELTQKQAAILASAARL 385 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADA------------------ELCETGTPE 405 +K GG LVYATCSVLP+EN +AF +D LC G Sbjct: 386 VKPGGRLVYATCSVLPQENEAIAEAFASEHSDFVAMDAGELLAQLKVEQGNALCSGGETG 445 Query: 406 QPGKQNLPGAEEGDGFFYAKLIKK 429 + P E DGFF A +K Sbjct: 446 TQYLRLWPQRHETDGFFAAVWTRK 469 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B2VK95 Ribosomal RNA small subunit methyltransferase B ... 528 e-148 UniRef50_B5FCW8 Ribosomal RNA small subunit methyltransferase B ... 523 e-147 UniRef50_Q2NQQ2 Ribosomal RNA small subunit methyltransferase B ... 510 e-143 UniRef50_A3DCX8 Sun protein n=5 Tax=Clostridium RepID=A3DCX8_CLOTH 507 e-142 UniRef50_A5D1B7 tRNA and rRNA cytosine-C5-methylases n=6 Tax=Clo... 505 e-141 UniRef50_C6D4F5 Sun protein n=87 Tax=Bacilli RepID=C6D4F5_PAESJ 501 e-140 UniRef50_A8FD39 rRNA SAM-dependent methyltransferase RmsB n=3 Ta... 494 e-138 UniRef50_Q31J86 Ribosomal RNA small subunit methyltransferase B ... 494 e-138 UniRef50_Q12TA7 Sun protein n=8 Tax=Gammaproteobacteria RepID=Q1... 493 e-138 UniRef50_B7KB91 Sun protein n=19 Tax=Cyanobacteria RepID=B7KB91_... 490 e-137 UniRef50_A8MH88 Sun protein n=7 Tax=Clostridiaceae RepID=A8MH88_... 487 e-136 UniRef50_C6MTY9 Sun protein n=1 Tax=Geobacter sp. M18 RepID=C6MT... 487 e-136 UniRef50_A6VR79 Sun protein n=2 Tax=Marinomonas RepID=A6VR79_MARMS 486 e-136 UniRef50_B1HQE5 Ribosomal RNA small subunit methyltransferase B ... 483 e-135 UniRef50_P94464 Ribosomal RNA small subunit methyltransferase B ... 483 e-135 UniRef50_C4ZEV6 Sun protein n=4 Tax=Clostridiales RepID=C4ZEV6_E... 482 e-134 UniRef50_B0KA07 Sun protein n=11 Tax=Thermoanaerobacterales RepI... 481 e-134 UniRef50_C0GIQ4 Sun protein n=1 Tax=Dethiobacter alkaliphilus AH... 479 e-134 UniRef50_Q8EKR0 Ribosomal RNA small subunit methyltransferase B ... 478 e-133 UniRef50_B0A9Y2 Putative uncharacterized protein n=2 Tax=Clostri... 478 e-133 UniRef50_C9RZP8 Sun protein n=5 Tax=Bacillales RepID=C9RZP8_GEOSY 477 e-133 UniRef50_A0Q113 Sun protein n=35 Tax=Clostridium RepID=A0Q113_CLONN 473 e-132 UniRef50_B9M341 Sun protein n=4 Tax=Geobacter RepID=B9M341_GEOSF 473 e-132 UniRef50_D1BMC4 Sun protein n=3 Tax=Veillonella RepID=D1BMC4_VEIPT 472 e-131 UniRef50_Q2BQD6 Fmu, rRNA SAM-dependent methyltransferase n=1 Ta... 471 e-131 UniRef50_B8FS79 Sun protein n=2 Tax=Desulfitobacterium hafniense... 468 e-130 UniRef50_Q2SQX3 Sun protein n=1 Tax=Hahella chejuensis KCTC 2396... 468 e-130 UniRef50_UPI0001C335A0 ribosomal RNA small subunit methyltransfe... 467 e-130 UniRef50_C0WD86 SUN protein n=1 Tax=Acidaminococcus sp. D21 RepI... 466 e-130 UniRef50_P72943 Ribosomal RNA small subunit methyltransferase B ... 465 e-129 UniRef50_Q2RK22 Sun protein n=3 Tax=Clostridia RepID=Q2RK22_MOOTA 464 e-129 UniRef50_Q3AC21 Sun protein n=1 Tax=Carboxydothermus hydrogenofo... 464 e-129 UniRef50_D1KD39 Ribosomal RNA small subunit methyltransferase B ... 463 e-129 UniRef50_A6NUS8 Putative uncharacterized protein n=1 Tax=Bactero... 463 e-129 UniRef50_A4BK87 Putative uncharacterized protein n=1 Tax=Reineke... 462 e-129 UniRef50_A1TWM9 Sun protein n=3 Tax=Marinobacter RepID=A1TWM9_MARAV 462 e-128 UniRef50_C4V0R0 rRNA SAM-dependent methyltransferase RmsB n=1 Ta... 461 e-128 UniRef50_D2RNU3 Sun protein n=3 Tax=Veillonellaceae RepID=D2RNU3... 461 e-128 UniRef50_B1YIQ1 Sun protein n=2 Tax=Exiguobacterium RepID=B1YIQ1... 460 e-128 UniRef50_B2IXU2 Sun protein n=1 Tax=Nostoc punctiforme PCC 73102... 460 e-128 UniRef50_B3PGY5 Ribosomal RNA small subunit methyltransferase B ... 459 e-127 UniRef50_Q2JK83 Ribosomal RNA small subunit methyltransferase B ... 458 e-127 UniRef50_B8FHH2 Sun protein n=1 Tax=Desulfatibacillum alkenivora... 457 e-127 UniRef50_B4WR53 Ribosomal RNA small subunit methyltransferase B ... 457 e-127 UniRef50_Q603G1 Sun protein n=1 Tax=Methylococcus capsulatus Rep... 457 e-127 UniRef50_D1RHX8 Ribosomal RNA small subunit methyltransferase B ... 456 e-127 UniRef50_B2A2K5 Sun protein n=1 Tax=Natranaerobius thermophilus ... 456 e-126 UniRef50_C9LLK5 Ribosomal RNA small subunit methyltransferase B ... 455 e-126 UniRef50_B3WEW8 RRNA methylase (Putative) n=77 Tax=Bacilli RepID... 454 e-126 UniRef50_A1WZH2 Sun protein n=1 Tax=Halorhodospira halophila SL1... 453 e-126 UniRef50_Q3A7Z0 Sun protein n=2 Tax=Desulfuromonadales RepID=Q3A... 453 e-126 UniRef50_B5JST2 Ribosomal RNA small subunit methyltransferase B ... 453 e-126 UniRef50_B8CWT0 Sun protein n=1 Tax=Halothermothrix orenii H 168... 452 e-125 UniRef50_A0LEK0 Sun protein n=1 Tax=Syntrophobacter fumaroxidans... 451 e-125 UniRef50_Q88B41 Ribosomal RNA small subunit methyltransferase B ... 451 e-125 UniRef50_Q5ZSC6 rRNA methyltransferase (SUN protein) n=5 Tax=Gam... 449 e-125 UniRef50_D0BMY2 Ribosomal RNA small subunit methyltransferase B ... 449 e-125 UniRef50_C0N5F9 Ribosomal RNA small subunit methyltransferase B ... 449 e-124 UniRef50_P45679 Ribosomal RNA small subunit methyltransferase B ... 447 e-124 UniRef50_C9L6W4 Ribosomal RNA small subunit methyltransferase B ... 446 e-124 UniRef50_Q2LRX5 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Syn... 446 e-123 UniRef50_UPI0000E0DBE4 Putative Sun protein n=1 Tax=Rhodobactera... 446 e-123 UniRef50_A7VUU4 Putative uncharacterized protein n=1 Tax=Clostri... 445 e-123 UniRef50_Q0AXL7 Putative uncharacterized protein n=1 Tax=Syntrop... 444 e-123 UniRef50_C0EFK3 Putative uncharacterized protein n=1 Tax=Clostri... 443 e-123 UniRef50_Q7A601 SA1060 protein n=63 Tax=Staphylococcaceae RepID=... 442 e-123 UniRef50_A8ZUK3 Sun protein n=1 Tax=Desulfococcus oleovorans Hxd... 440 e-122 UniRef50_B5YF43 Ribosomal RNA small subunit methyltransferase B ... 439 e-121 UniRef50_A5GRG8 Ribosomal RNA small subunit methyltransferase B ... 439 e-121 UniRef50_A5VKQ4 Sun protein n=14 Tax=Lactobacillus RepID=A5VKQ4_... 439 e-121 UniRef50_A1AVP0 Sun protein n=1 Tax=Candidatus Ruthia magnifica ... 438 e-121 UniRef50_Q88RR3 Ribosomal RNA small subunit methyltransferase B ... 438 e-121 UniRef50_UPI0001C36EDB sun protein n=1 Tax=Ruminococcus flavefac... 437 e-121 UniRef50_A5KNU7 Putative uncharacterized protein n=4 Tax=Clostri... 436 e-121 UniRef50_A8RWU3 Putative uncharacterized protein n=4 Tax=Clostri... 435 e-120 UniRef50_C0QI57 RsmB n=1 Tax=Desulfobacterium autotrophicum HRM2... 435 e-120 UniRef50_B0MPP7 Putative uncharacterized protein n=1 Tax=Eubacte... 435 e-120 UniRef50_C0XM65 rRNA SAM-dependent methyltransferase RmsB n=3 Ta... 434 e-120 UniRef50_C5RAE2 RNA methyltransferase n=3 Tax=Lactobacillales Re... 434 e-120 UniRef50_C7RA09 Sun protein n=1 Tax=Kangiella koreensis DSM 1606... 433 e-120 UniRef50_B3E3P1 Sun protein n=4 Tax=Desulfuromonadales RepID=B3E... 432 e-119 UniRef50_B0MGA0 Putative uncharacterized protein n=2 Tax=Clostri... 431 e-119 UniRef50_B8KLT3 Ribosomal RNA small subunit methyltransferase B ... 431 e-119 UniRef50_Q03FY2 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Pedi... 431 e-119 UniRef50_C5EIZ3 Putative uncharacterized protein n=2 Tax=Clostri... 430 e-119 UniRef50_C3RII4 SUN protein n=10 Tax=Bacteria RepID=C3RII4_9MOLU 430 e-119 UniRef50_B9ZKR1 Sun protein n=2 Tax=Chromatiales RepID=B9ZKR1_9GAMM 428 e-118 UniRef50_A9KM96 Sun protein n=1 Tax=Clostridium phytofermentans ... 428 e-118 UniRef50_A3MAA2 16S rRNA m5C967 SAM-dependent methyltransferase ... 427 e-118 UniRef50_B9XT31 Sun protein n=1 Tax=bacterium Ellin514 RepID=B9X... 427 e-118 UniRef50_UPI0001BC34B4 sun protein n=1 Tax=Butyrivibrio crossotu... 426 e-118 UniRef50_C4FT85 Putative uncharacterized protein n=1 Tax=Catonel... 426 e-117 UniRef50_Q03W17 tRNA and rRNA cytosine-C5-methylase n=11 Tax=Lac... 425 e-117 UniRef50_A8SLL0 Putative uncharacterized protein n=1 Tax=Parvimo... 425 e-117 UniRef50_D0MH27 Sun protein n=1 Tax=Rhodothermus marinus DSM 425... 424 e-117 UniRef50_Q1DCG5 Ribosomal RNA small subunit methyltransferase B ... 424 e-117 UniRef50_A4XL79 Sun protein n=2 Tax=Clostridia RepID=A4XL79_CALS8 422 e-116 UniRef50_A4BP82 Fmu, rRNA SAM-dependent methyltransferase n=1 Ta... 421 e-116 UniRef50_A8PKU4 Ribosomal RNA small subunit methyltransferase B ... 421 e-116 UniRef50_Q87AR1 Ribosomal RNA small subunit methyltransferase B ... 421 e-116 UniRef50_B3QZ49 Sun protein n=1 Tax=Chloroherpeton thalassium AT... 420 e-116 UniRef50_D1PM68 Ribosomal RNA small subunit methyltransferase B ... 420 e-116 UniRef50_D1VSE3 Ribosomal RNA small subunit methyltransferase B ... 420 e-116 UniRef50_A0LDW0 Sun protein n=2 Tax=cellular organisms RepID=A0L... 419 e-116 UniRef50_A0Z2Z6 Sun protein n=2 Tax=unclassified Gammaproteobact... 419 e-115 UniRef50_C6P2V1 Sun protein n=1 Tax=Sideroxydans lithotrophicus ... 418 e-115 UniRef50_Q0VTE3 tRNA and rRNA cytosine-C5-methylase, putative n=... 418 e-115 UniRef50_B1C5S4 Putative uncharacterized protein n=1 Tax=Anaerof... 417 e-115 UniRef50_A8RCQ7 Putative uncharacterized protein n=1 Tax=Eubacte... 417 e-115 UniRef50_C0EY63 Putative uncharacterized protein n=1 Tax=Eubacte... 417 e-115 UniRef50_UPI0001BC65B2 16S rRNA m(5)C 967 methyltransferase n=2 ... 416 e-115 UniRef50_C4G2S0 Putative uncharacterized protein n=1 Tax=Abiotro... 415 e-114 UniRef50_Q1Q7P9 Putative uncharacterized protein n=1 Tax=Candida... 414 e-114 UniRef50_Q2YC21 Sun protein n=7 Tax=Betaproteobacteria RepID=Q2Y... 411 e-113 UniRef50_C8WW78 Sun protein n=2 Tax=Alicyclobacillus acidocaldar... 411 e-113 UniRef50_C5WIG1 16S rRNA m(5)C 967 methyltransferase n=44 Tax=St... 411 e-113 UniRef50_A8ST69 Putative uncharacterized protein n=2 Tax=Clostri... 410 e-113 UniRef50_A5EWM0 RRNA SAM-dependent methyltransferase, Fmu n=2 Ta... 410 e-113 UniRef50_UPI00016C38F9 Fmu, rRNA SAM-dependent methyltransferase... 408 e-112 UniRef50_B0VHI6 Putative 16S rRNA m5C967 methyltransferase, S-ad... 407 e-112 UniRef50_B9K874 Sun protein n=6 Tax=Thermotogaceae RepID=B9K874_... 406 e-112 UniRef50_A8G3E0 Sun protein (Fmu protein) n=7 Tax=Prochlorococcu... 405 e-111 UniRef50_C7RGU2 Fmu (Sun) domain protein n=4 Tax=Anaerococcus Re... 404 e-111 UniRef50_C3WQ58 16S rRNA m(5)C 967 methyltransferase n=15 Tax=Fu... 403 e-111 UniRef50_A8YVW1 rRNA methylase n=27 Tax=Lactobacillus RepID=A8YV... 401 e-110 UniRef50_B0PFT6 Putative uncharacterized protein n=1 Tax=Anaerot... 401 e-110 UniRef50_D0KVS1 Sun protein n=1 Tax=Halothiobacillus neapolitanu... 400 e-110 UniRef50_B4CZF1 Sun protein n=1 Tax=Chthoniobacter flavus Ellin4... 400 e-110 UniRef50_C5V0U6 Sun protein n=1 Tax=Gallionella ferruginea ES-2 ... 400 e-110 UniRef50_B9Y7F7 Putative uncharacterized protein n=1 Tax=Holdema... 398 e-109 UniRef50_B7J3C2 Sun protein n=2 Tax=Acidithiobacillus ferrooxida... 397 e-109 UniRef50_C7H5H8 Ribosomal RNA small subunit methyltransferase B ... 395 e-108 UniRef50_Q651X9 Os09g0477900 protein n=3 Tax=Magnoliophyta RepID... 394 e-108 UniRef50_A1KRE7 SUN-family protein n=32 Tax=Neisseriaceae RepID=... 394 e-108 UniRef50_B9GFY0 Predicted protein n=6 Tax=Spermatophyta RepID=B9... 394 e-108 UniRef50_B9QVY4 Ribosomal RNA small subunit methyltransferase B ... 394 e-108 UniRef50_C8R080 Sun protein n=1 Tax=Desulfurivibrio alkaliphilus... 392 e-107 UniRef50_B3EF03 Sun protein n=11 Tax=Chlorobiaceae RepID=B3EF03_... 392 e-107 UniRef50_Q1IIS1 Sun protein n=1 Tax=Candidatus Koribacter versat... 392 e-107 UniRef50_A6BZY6 Sun protein n=1 Tax=Planctomyces maris DSM 8797 ... 392 e-107 UniRef50_C5X355 Putative uncharacterized protein Sb02g027560 n=1... 392 e-107 UniRef50_C1A605 Putative rRNA methyltransferase n=1 Tax=Gemmatim... 392 e-107 UniRef50_Q2S463 Ribosomal RNA small subunit methyltransferase B ... 390 e-107 UniRef50_Q14PA1 Putative ribosomal rna small subunit methyltrans... 390 e-107 UniRef50_C5NYN0 Ribosomal RNA small subunit methyltransferase B ... 390 e-107 UniRef50_B7CB38 Putative uncharacterized protein n=1 Tax=Eubacte... 389 e-107 UniRef50_C8PZ41 Ribosomal RNA small subunit methyltransferase B ... 388 e-106 UniRef50_B6JAF7 SUN protein n=6 Tax=Alphaproteobacteria RepID=B6... 386 e-106 UniRef50_Q8TGY3 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 385 e-105 UniRef50_UPI000174635C RsmB n=1 Tax=Verrucomicrobium spinosum DS... 384 e-105 UniRef50_D2UG22 Putative trna and rrna cytosine-c5-methylase pro... 384 e-105 UniRef50_Q6AS22 Related to SUN protein (FMU protein) n=1 Tax=Des... 382 e-104 UniRef50_D0WMY6 Ribosomal RNA small subunit methyltransferase B ... 380 e-104 UniRef50_Q1NQ57 Fmu, rRNA SAM-dependent methyltransferase n=2 Ta... 379 e-104 UniRef50_UPI0000E87C3C sun; rRNA methylase n=1 Tax=Methylophilal... 377 e-103 UniRef50_Q9LK54 Similarity to SUN and FMU proteins n=3 Tax=Embry... 377 e-103 UniRef50_A4U1B3 Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p:Antite... 377 e-103 UniRef50_Q21DD2 Fmu (Sun) n=13 Tax=Rhizobiales RepID=Q21DD2_RHOPB 375 e-102 UniRef50_B2SFT3 tRNA and rRNA cytosine-C5-methylase, sun protein... 375 e-102 UniRef50_C1ZLP1 Ribosomal RNA small subunit methyltransferase Rs... 374 e-102 UniRef50_C2HH21 Possible rRNA SAM-dependent methyltransferase Rm... 374 e-102 UniRef50_A7IBA4 Sun protein n=6 Tax=Rhizobiales RepID=A7IBA4_XANP2 374 e-102 UniRef50_D2MQI4 Putative ribosomal RNA small subunit methyltrans... 371 e-101 UniRef50_Q9V089 Sun/NOL1/NOP nucleolar protein n=3 Tax=Pyrococcu... 370 e-101 UniRef50_C7GZX3 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Eub... 370 e-101 UniRef50_D0LLT9 Sun protein n=1 Tax=Haliangium ochraceum DSM 143... 369 e-101 UniRef50_C2BWI2 Ribosomal RNA small subunit methyltransferase B ... 368 e-100 UniRef50_Q5P4P8 tRNA and rRNA cytosine-C5-methylases sun n=8 Tax... 367 e-100 UniRef50_Q2SSR7 RRNA methyltransferase RsmB (Sun protein), putat... 367 e-100 UniRef50_B6IQ69 tRNA and rRNA cytosine-C5-methylase, putative n=... 367 e-100 UniRef50_C6NTF2 Ribosomal RNA small subunit methyltransferase B ... 367 e-100 UniRef50_A5WI31 Fmu (Sun) domain protein n=3 Tax=Psychrobacter R... 366 e-100 UniRef50_B6BVG1 Sun protein n=1 Tax=beta proteobacterium KB13 Re... 366 e-100 UniRef50_A2BK62 tRNA and rRNA cytosine-C5-methylase n=12 Tax=Arc... 366 e-99 UniRef50_A7IDU9 Fmu (Sun) domain protein n=2 Tax=Xanthobacterace... 366 1e-99 UniRef50_A3VQU7 TRNA and rRNA cytosine-C5-methylase-like protein... 366 1e-99 UniRef50_B2UP28 Sun protein n=1 Tax=Akkermansia muciniphila ATCC... 365 2e-99 UniRef50_Q8TGZ8 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 365 2e-99 UniRef50_C5A6U4 SAM-dependent tRNA/rRNA cytosine-C5 methylase n=... 364 3e-99 UniRef50_B6W6K6 Putative uncharacterized protein n=1 Tax=Anaeroc... 364 4e-99 UniRef50_C6XRR6 Fmu (Sun) domain protein n=1 Tax=Hirschia baltic... 362 1e-98 UniRef50_D0ME27 Fmu (Sun) domain protein n=1 Tax=Rhodothermus ma... 362 2e-98 UniRef50_D1AKD9 Fmu (Sun) domain protein n=4 Tax=Fusobacteriacea... 360 4e-98 UniRef50_B5YIL4 Sun protein n=1 Tax=Thermodesulfovibrio yellowst... 360 6e-98 UniRef50_C6WT60 Fmu (Sun) domain protein n=1 Tax=Methylotenera m... 359 9e-98 UniRef50_A7BCC1 Putative uncharacterized protein n=1 Tax=Actinom... 359 1e-97 UniRef50_C8NZ84 rRNA methylase n=1 Tax=Erysipelothrix rhusiopath... 357 3e-97 UniRef50_C6R1D5 Ribosomal RNA small subunit methyltransferase B ... 357 4e-97 UniRef50_A3UKE9 RRNA methyltransferase RsmB n=1 Tax=Oceanicaulis... 357 4e-97 UniRef50_Q8TGY2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 357 5e-97 UniRef50_Q2WB24 tRNA and rRNA cytosine-C5-methylase n=3 Tax=Alph... 357 5e-97 UniRef50_D2NSI1 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Micr... 356 1e-96 UniRef50_C9RK88 Fmu (Sun) domain protein n=1 Tax=Fibrobacter suc... 354 3e-96 UniRef50_A6LN58 NusB/RsmB/TIM44 n=2 Tax=Thermosipho RepID=A6LN58... 353 1e-95 UniRef50_A6UED5 Fmu (Sun) domain protein n=14 Tax=Rhizobiales Re... 352 1e-95 UniRef50_A9IZD6 SUN-family protein n=5 Tax=Bartonella RepID=A9IZ... 352 2e-95 UniRef50_Q0ADT5 Fmu (Sun) domain protein n=50 Tax=Betaproteobact... 351 3e-95 UniRef50_P46087 Putative ribosomal RNA methyltransferase NOP2 n=... 350 5e-95 UniRef50_D2RG94 RNA methylase, NOL1/NOP2/sun family n=1 Tax=Arch... 350 5e-95 UniRef50_Q0G330 Putative uncharacterized protein n=5 Tax=Rhizobi... 350 6e-95 UniRef50_Q2RXU7 tRNA/rRNA cytosine-C5-methylase n=8 Tax=Alphapro... 349 1e-94 UniRef50_C2GHU0 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Cor... 348 2e-94 UniRef50_Q2T2A8 Sun protein n=76 Tax=Proteobacteria RepID=Q2T2A8... 348 2e-94 UniRef50_B3R820 16S rRNA m5C967 methyltransferase, S-adenosyl-L-... 348 3e-94 UniRef50_A4T0M4 Sun protein n=2 Tax=Polynucleobacter necessarius... 348 3e-94 UniRef50_C1F543 Putative ribosomal RNA small subunit methyltrans... 348 3e-94 UniRef50_B7GI32 Sun, tRNA and rRNA cytosine-C5-methylase fused t... 348 3e-94 UniRef50_Q1D976 Methyltransferase, RsmB/NOP family n=2 Tax=Cysto... 347 7e-94 UniRef50_Q1MPZ7 TRNA and rRNA cytosine-C5-methylases n=1 Tax=Law... 346 8e-94 UniRef50_A7HSA7 Fmu (Sun) domain protein n=1 Tax=Parvibaculum la... 346 8e-94 UniRef50_A9BNV4 Fmu (Sun) domain protein n=2 Tax=Comamonadaceae ... 346 8e-94 UniRef50_C7I4U3 Sun protein n=1 Tax=Thiomonas intermedia K12 Rep... 345 1e-93 UniRef50_B9JUI9 Sun protein n=44 Tax=Rhizobiales RepID=B9JUI9_AGRVS 345 2e-93 UniRef50_P71675 Putative methyltransferase Rv1407/MT1451 n=56 Ta... 345 2e-93 UniRef50_D0GJC1 Putative ribosomal RNA small subunit methyltrans... 344 3e-93 UniRef50_C5SHX2 Sun protein n=1 Tax=Asticcacaulis excentricus CB... 344 4e-93 UniRef50_C6XFI6 Fmu (Sun) domain protein n=1 Tax=Candidatus Libe... 343 5e-93 UniRef50_C7LUK3 Sun protein n=1 Tax=Desulfomicrobium baculatum D... 343 5e-93 UniRef50_C0W1K3 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Act... 343 7e-93 UniRef50_B4RCX9 rRNA methyltransferase RsmB n=8 Tax=Alphaproteob... 343 8e-93 UniRef50_C1TRU2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Dethiosu... 342 1e-92 UniRef50_C6X123 Ribosomal RNA small subunit methyltransferase B ... 342 2e-92 UniRef50_C2KVE0 Possible rRNA (Cytosine-5-)-methyltransferase n=... 342 2e-92 UniRef50_UPI0001C31BDA sun protein n=1 Tax=Conexibacter woesei D... 341 3e-92 UniRef50_Q0F395 Sun protein n=1 Tax=Mariprofundus ferrooxydans P... 340 4e-92 UniRef50_A6GKY6 Putative uncharacterized protein n=1 Tax=Limnoba... 340 4e-92 UniRef50_A9LZZ8 SUN-family protein n=29 Tax=Betaproteobacteria R... 340 5e-92 UniRef50_C5DAS2 RNA methylase, NOL1/NOP2/sun family n=7 Tax=Firm... 340 8e-92 UniRef50_C6QJ47 Sun protein n=1 Tax=Hyphomicrobium denitrificans... 339 1e-91 UniRef50_D2RGI9 Fmu (Sun) domain protein n=2 Tax=Archaeoglobacea... 339 1e-91 UniRef50_Q2RN41 tRNA and rRNA cytosine-C5-methylase n=1 Tax=Rhod... 339 1e-91 UniRef50_C7JI41 tRNA/rRNA cytosine-C5-methylase Nol1/Nop2/Sun n=... 338 3e-91 UniRef50_UPI0000ECD55E Putative RNA methyltransferase NOL1 (EC 2... 338 3e-91 UniRef50_Q8TGZ4 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 338 3e-91 UniRef50_A6GTQ3 NOL1/NOP2/sun family protein n=1 Tax=Limnobacter... 337 4e-91 UniRef50_C6BVK4 NusB/RsmB/TIM44 n=1 Tax=Desulfovibrio salexigens... 337 4e-91 UniRef50_Q16QI0 Ribosomal RNA small subunit methyltransferase b ... 337 6e-91 UniRef50_C0VVY3 Possible rRNA SAM-dependent methyltransferase Rm... 335 2e-90 UniRef50_Q8TH02 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanop... 335 2e-90 UniRef50_C0W3L2 rRNA (Cytosine-C(5)-)-methyltransferase n=1 Tax=... 335 3e-90 UniRef50_B3QS48 Fmu (Sun) domain protein n=1 Tax=Chloroherpeton ... 334 4e-90 UniRef50_Q16CE2 RRNA methyltransferase RsmB n=15 Tax=Rhodobacter... 333 7e-90 UniRef50_O27960 Fmu and fmv protein n=1 Tax=Archaeoglobus fulgid... 333 7e-90 UniRef50_UPI00015B4FE9 PREDICTED: similar to CG8545-PA n=2 Tax=N... 333 8e-90 UniRef50_C6PCM3 RNA methylase, NOL1/NOP2/sun family n=1 Tax=Ther... 333 9e-90 UniRef50_UPI0000E87BFE Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p... 333 9e-90 UniRef50_UPI0001C3591B probable ribosomal RNA small subunit meth... 332 1e-89 UniRef50_A4IGA8 Si:dkey-91i17.1 protein (Fragment) n=21 Tax=Euka... 332 2e-89 UniRef50_B1XW23 Fmu (Sun) domain protein n=6 Tax=Burkholderiales... 332 2e-89 UniRef50_C6W4A0 Fmu (Sun) domain protein n=1 Tax=Dyadobacter fer... 332 2e-89 Sequences not found previously or not previously below threshold: >UniRef50_B2VK95 Ribosomal RNA small subunit methyltransferase B n=3 Tax=Erwinia RepID=RSMB_ERWT9 Length = 429 Score = 528 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 309/429 (72%), Positives = 365/429 (85%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MKK NLR +AAQ +E+VVEQGQSLSN+LP Q+ V DKD ALLQELC+GVLRTL QL+W Sbjct: 1 MKKMTNLRCIAAQTIEKVVEQGQSLSNVLPAAQKSVGDKDAALLQELCYGVLRTLPQLEW 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 +I +LM+RPMTGKQR VH+LIMVGLYQL++TRIP HAALAETVEGA+A+KRPQLKGLING Sbjct: 61 VIGRLMSRPMTGKQRAVHFLIMVGLYQLMFTRIPAHAALAETVEGAVALKRPQLKGLING 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLRQFQRQQ+EL+ + N D +YLHP WLL+RL++A+P QW+ IV+ANNQRPPMWLR+NR Sbjct: 121 VLRQFQRQQDELMQQMNDGDQQYLHPKWLLERLKRAWPAQWKQIVDANNQRPPMWLRVNR 180 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 HHSRD+WL LL+E+G + F H + DA+RLE+P V LPGF+ GW+TVQD SAQGC+ Sbjct: 181 QHHSRDAWLTLLEESGKQAFAHPQHGDALRLESPCAVGQLPGFDQGWITVQDVSAQGCVA 240 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 LAP++GE ILDLCAAPGGKTTHILE AP+A+V+AVD+D QRL+RV +NL+RL M+A VK Sbjct: 241 LLAPRDGEQILDLCAAPGGKTTHILEAAPQAKVMAVDVDAQRLARVSENLQRLTMQAEVK 300 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 QGDGR P+ WCG+ QFDRILLDAPCSATGVIRRHPDIKWLRRDRDI ELA LQ +ILDA+ Sbjct: 301 QGDGRTPAAWCGDTQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAALQQQILDAV 360 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 WPHLK GGTL+YATCSVLPEEN +QI FLQR ADA L ETG QPG Q P A+ GDG Sbjct: 361 WPHLKPGGTLLYATCSVLPEENHVQIGQFLQRHADATLIETGDLTQPGIQVFPQADGGDG 420 Query: 421 FFYAKLIKK 429 F+YAKL+K+ Sbjct: 421 FYYAKLVKQ 429 >UniRef50_B5FCW8 Ribosomal RNA small subunit methyltransferase B n=14 Tax=Gammaproteobacteria RepID=B5FCW8_VIBFM Length = 451 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 250/424 (58%), Positives = 316/424 (74%), Gaps = 1/424 (0%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N+R+ AA+ + QVV+QG SLS+ LP Q ++ +D+ALLQE+C+GVLR L +L+ + L Sbjct: 27 NVRAAAAKVIYQVVDQGHSLSSALPKAQSEIKPRDQALLQEICYGVLRFLPRLESVAQSL 86 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 M +P+ GKQR H+LI+VG+YQL + RIP HAA+AETVEG +K P+L+GLIN VLR + Sbjct: 87 MDKPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVAETVEGTKNLKGPKLRGLINAVLRNY 146 Query: 126 QRQQEELLAE-FNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QR QEEL A+ + +Y HP WLLK LQ+AYPEQW++IVEANN + PMWLR+N HH+ Sbjct: 147 QRSQEELDAKSVSHDSGKYGHPGWLLKMLQQAYPEQWETIVEANNSKAPMWLRVNSQHHT 206 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD ++ALL++ + PH+ DA+ L+ V+ LPGFE GWV+VQDA+AQ +L P Sbjct: 207 RDEYIALLEKEEISVTPHSQATDALLLDKARDVYTLPGFEQGWVSVQDAAAQLSAEYLQP 266 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 QNGE ILD CAAPGGKT HILE + VVA+D DE RL RVY+NL+RL +KA V GD Sbjct: 267 QNGELILDCCAAPGGKTAHILERTQDTNVVAIDCDETRLKRVYENLERLNLKAQVICGDA 326 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R+P +W +QFDRILLDAPCSATGVIRRHPDIKWLRR DI LA+LQSEI DA+W L Sbjct: 327 RHPEEWWKGEQFDRILLDAPCSATGVIRRHPDIKWLRRAEDIKALAELQSEIFDAMWLQL 386 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYA 424 K+GGT+VYATCS+ P EN Q+KAFL RT+DA L + PE+PG+Q LPG E DGF+YA Sbjct: 387 KSGGTMVYATCSITPLENCDQVKAFLARTSDATLIDNTDPEKPGRQILPGEENMDGFYYA 446 Query: 425 KLIK 428 L K Sbjct: 447 VLQK 450 >UniRef50_Q2NQQ2 Ribosomal RNA small subunit methyltransferase B n=264 Tax=Bacteria RepID=RSMB_SODGM Length = 433 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 291/428 (67%), Positives = 337/428 (78%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK NLR +AA+AV QV++QGQSL +LPPLQ +S+KD+ALLQELCFG++R L QL+W Sbjct: 1 MKTHYNLRVIAARAVAQVLDQGQSLGALLPPLQAPLSEKDRALLQELCFGIMRVLPQLEW 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L+ +LMA+P+TGKQR VHYL+MVGLYQL YTRIPPHAALAETVEGA+A+KRPQ KGLING Sbjct: 61 LLRQLMAKPLTGKQRPVHYLLMVGLYQLTYTRIPPHAALAETVEGAVAMKRPQFKGLING 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLRQFQRQQ LLA+ D R+LHPSWL KR+ A+P Q+ I++ANNQRPPMWLR+NR Sbjct: 121 VLRQFQRQQPALLADAERQDIRHLHPSWLQKRILAAWPAQYAQIIDANNQRPPMWLRVNR 180 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 HHSRD++LALL + H+ PDA+RLE P V LPGF+ GWVTVQDASAQGC Sbjct: 181 LHHSRDAYLALLAGTDIAAVAHSQLPDAIRLEMPCNVGRLPGFDRGWVTVQDASAQGCAL 240 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 LAPQN E ILDLCAAPGGKTTHILE+AP A+V+AVD+D QR +R++DNL+RLGM+A V Sbjct: 241 LLAPQNSETILDLCAAPGGKTTHILEIAPAARVMAVDVDGQRAARIHDNLQRLGMQAEVV 300 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 GDGR P W FDRILLDAPCSATGVIRRHPDIKWLRRD DI ELA+LQ +IL A Sbjct: 301 IGDGRTPDAWRSGMLFDRILLDAPCSATGVIRRHPDIKWLRRDGDIAELAELQRQILCAA 360 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 W LK GGTL+YATCS+LPEEN QI AFL DA L ETG PG Q LP GDG Sbjct: 361 WRVLKLGGTLLYATCSILPEENRGQIAAFLADHPDALLQETGDAAAPGLQCLPVPTSGDG 420 Query: 421 FFYAKLIK 428 FFYAK+IK Sbjct: 421 FFYAKMIK 428 >UniRef50_A3DCX8 Sun protein n=5 Tax=Clostridium RepID=A3DCX8_CLOTH Length = 455 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 126/449 (28%), Positives = 218/449 (48%), Gaps = 21/449 (4%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLD 59 K +R A + + + E+G + L Q+ D+A + ++ +G L+ +D Sbjct: 5 TKVDKVRETALKILYDINEKGAYSNISLNKYLNGQEFESIDRAFITDIVYGTLKWQYTID 64 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 +LI K + + + ++ +G+YQL+Y +IP AA E+V+ A + Sbjct: 65 YLIEKFSSVKIKKISPWIFNILRMGIYQLIYTDKIPFFAACNESVKLAAKYGHAASSKYV 124 Query: 119 NGVLRQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYPEQWQS-IVEANNQR 171 N VLR R +E L +Y HP W++K + E++ +++ANN+ Sbjct: 125 NAVLRNIARNKENLPYPDRNNDTAHYLSVKYSHPVWMVKDWLDCFGEEFTEGLLKANNEV 184 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P +R+N S+ + +L + G + +A+ + P+ V + F G+ VQ Sbjct: 185 APFTVRVNDLKISKKELVDILTKDGFEVENGKYLDEALIIRNPSAVQKMDAFAKGYFQVQ 244 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 D S+ L P+ GE ILD+C+APGGK+THI ++ V++ DI E ++ + Sbjct: 245 DESSMLVAKVLDPKPGETILDVCSAPGGKSTHIAQIMKNRGTVISRDIHEHKIKLIEQAK 304 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 +RLG++ + ++ DR+L+DAPC+ G+IRR PDIKW + D E+ Sbjct: 305 ERLGLEIIKTEVFDAAVLDGKLIEKIDRVLVDAPCTGFGIIRRKPDIKWSKNSEDKAEIV 364 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET--------- 401 LQ +IL ++K GG LVY+TC++ PEEN ++ F++ D L + Sbjct: 365 SLQHKILSTASKYVKDGGVLVYSTCTLEPEENEKAVERFIEENKDFYLEDITEFLPDALR 424 Query: 402 -GTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + + Q P + DGFF A++ K+ Sbjct: 425 KESAGKGYIQLYPNIDGIDGFFIARMRKR 453 >UniRef50_A5D1B7 tRNA and rRNA cytosine-C5-methylases n=6 Tax=Clostridia RepID=A5D1B7_PELTS Length = 456 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 138/450 (30%), Positives = 221/450 (49%), Gaps = 24/450 (5%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDW 60 + R +A + V V E+G + L + + D+A EL +G LR+L+ LDW Sbjct: 5 TGLSARELALKVVNAVEEEGAYANLALNQVLEKHRPGKLDRAFATELAYGTLRSLNTLDW 64 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 ++ + + +P++ + RTV ++ +G+YQL++ R+PP A E E A +N Sbjct: 65 VLEQFIKQPLSSQSRTVLNILRLGVYQLMFMDRVPPSAVCNEGAELARKYGHAGTVKFVN 124 Query: 120 GVLRQFQRQQEEL------LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 GVLR R+ E+ RY HP W++KR K + + ++ ANN Sbjct: 125 GVLRNISRRLNEISFPALEDDPVKHISLRYSHPVWMVKRWLKEFGLDHTVALCRANNGPA 184 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P +R N +RD L G+ P+ ++++ + +L F++G +QD Sbjct: 185 PNTVRTNTLKITRDGLAERLRNEGLTVSETEFAPEGLKIDGFFSIGSLQSFKEGLFQIQD 244 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLK 291 S+ L P G ++D C+APGGKTTH+ ++ +++AVDI +L + +N Sbjct: 245 ESSMLAGRALMPAPGAFVIDACSAPGGKTTHLAQLMENRGRILAVDIHPHKLVLIKENCS 304 Query: 292 RLGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ GD R + + D IL+DAPCS GV+RR PD +W + +P + Sbjct: 305 RLGINIVEGLAGDARELPENLY-NKADFILVDAPCSGLGVLRRRPDARWRKEPGQLPAII 363 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET--------- 401 QLQ EIL+ + LK G +VY+TC++ EEN Q++ FL + L + Sbjct: 364 QLQREILEGVARCLKKNGVIVYSTCTITREENLRQVEWFLDKHPQFVLEDLSPFLPAGLD 423 Query: 402 --GTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 GT + Q LP DGFF A++ KK Sbjct: 424 FEGTLKGGFLQVLPYRHGMDGFFIARMRKK 453 >UniRef50_C6D4F5 Sun protein n=87 Tax=Bacilli RepID=C6D4F5_PAESJ Length = 491 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 145/455 (31%), Positives = 218/455 (47%), Gaps = 28/455 (6%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDW 60 + R R +A + +V E G + L + Q ++ D AL+ EL +G ++ LD Sbjct: 36 RVRTPRELALDTLVKVAETGAYSNLQLNRVLQEAQLQRADAALVTELVYGTIQRQLTLDH 95 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLIN 119 + K A+ + + VH L+ + YQLLY RIP HAA+ E V A + G++N Sbjct: 96 WLGKFAAKGLRKLEPWVHQLLRMSAYQLLYLDRIPAHAAVNEAVTIAKRRGHQGISGMVN 155 Query: 120 GVLRQFQRQQEEL-------LAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQR 171 G+LR R + EL RY +P WL++R KAY + ++I + N+ Sbjct: 156 GILRSIDRNRAELTVDAIADKNPVVQISVRYSYPEWLVERWVKAYGAETAEAICASGNEP 215 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P +R+N SR+ L+LL E G P + + + GF DG T+Q Sbjct: 216 PHASVRVNPLRSSRNEVLSLLTEQGGDAEASRLAPAGIVVRRGGNLADTEGFRDGLWTMQ 275 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 D S+ +AP+ G +LD CAAPGGKTTH+ E+ + +V A D+ + + D Sbjct: 276 DESSMLVAEVVAPKAGMQVLDCCAAPGGKTTHMAELMSGKGKVYANDLHPHKRQLIVDQA 335 Query: 291 KRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 RLG++ D + D +LLDAPCS GVIRR P+IKW + D+ E+ Sbjct: 336 VRLGLQNIEAITEDAGKLGERFAPASIDAVLLDAPCSGFGVIRRKPEIKWTKTAGDVAEI 395 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ--- 406 A +Q +L A+ +K GGTLVY+TC++ EN Q+ FL+ + +L E Sbjct: 396 AAIQRRLLGAVAGLVKPGGTLVYSTCTIESTENEEQVAVFLKEHPEFQLDAEWPEEALAP 455 Query: 407 ------------PGKQNLPGAEEGDGFFYAKLIKK 429 Q LP DGFF A+L ++ Sbjct: 456 LREKGIIDSSFDGQAQLLPHHYGSDGFFIARLRRR 490 >UniRef50_A8FD39 rRNA SAM-dependent methyltransferase RmsB n=3 Tax=Bacillaceae RepID=A8FD39_BACP2 Length = 447 Score = 494 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 152/449 (33%), Positives = 226/449 (50%), Gaps = 23/449 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQL 58 MKK N+R +A A+ ++ + + +L + + ++D+DK LL EL +G L+ L Sbjct: 1 MKK-SNVREVALDALIKLEQNQAYSNLLLQSVMKDKDLADQDKPLLTELVYGTLQNKLAL 59 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 D+++ + +P V L+ + LYQ++Y +IP AA+ E VE + L Sbjct: 60 DYMLAPFVKKP-QKVAPWVMQLLRMSLYQMVYLEKIPDRAAIHEAVELTKKRGHKGISSL 118 Query: 118 INGVLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 +NGVLR QR+ +++ HP WL++ ++Y E +S+ + P Sbjct: 119 VNGVLRSVQREGVPAFDDIKDPVKRLSIETSHPLWLVQEWVQSYGFEATESMCRIHLVPP 178 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 LR+NR R + L +AG++ DA++L + + P F++G+VT+QD Sbjct: 179 KQTLRVNRIKTDRAALKQKLLDAGIETELGDLSEDALKL-MKGSIVSTPSFQEGYVTIQD 237 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLK 291 S+ L PQ GE +LD CAAPGGK+THI E + Q+V++D+ E ++ + K Sbjct: 238 ESSMLVARALDPQPGETVLDACAAPGGKSTHIAERMNDEGQIVSLDLHEHKVKLIKQAAK 297 Query: 292 RLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RL + + D R E FDRIL+DAPCS GVIRR PD+K+ + D LA Sbjct: 298 RLNLTQIEAKALDARKAKDDYSEASFDRILIDAPCSGFGVIRRKPDMKYTKSPEDSARLA 357 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL---CETGTPE-- 405 +Q IL P LK GGTLVY+TC++ P EN I AFLQ D E PE Sbjct: 358 IIQQAILKETAPLLKPGGTLVYSTCTMDPSENQQVIHAFLQEHQDFEPDLSLNERLPEQV 417 Query: 406 -----QPGKQNLPGAEEGDGFFYAKLIKK 429 Q LP DGFF + KK Sbjct: 418 APFVQNGSVQILPHYFGTDGFFICSMRKK 446 >UniRef50_Q31J86 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31J86_THICR Length = 436 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 194/433 (44%), Positives = 274/433 (63%), Gaps = 8/433 (1%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLI 62 N R +A + V+E G+SLS L + SD+ ++A Q L G LR +L+ + Sbjct: 2 AVNSRYIALKICLTVIEHGRSLSQSLAEGLAQFSDRRERAFTQNLVLGTLRWQERLEAIR 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + L+ +P+ K V+ LI++GLYQ+LY P HAA++ETV ++K+P +GLINGVL Sbjct: 62 SHLLKKPLKAKDEDVNQLILLGLYQILYMDTPEHAAVSETVNLTKSLKKPWARGLINGVL 121 Query: 123 RQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 R F R ++ + E + A RY HP W K ++ AYP+ W+ I+ ANN+ P+ LR+N Sbjct: 122 RTFLRDKDSICEEVDKKPAYRYSHPQWFTKTIRNAYPDHWEQILSANNEPAPLTLRVNPL 181 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 + +R+++LALL + ++ H P + L+ + LP +++G +VQDA+AQ Sbjct: 182 YQTREAFLALLSDQAVEADIHPKAPQGIVLKNSLDITQLPTYDEGGFSVQDAAAQQAAYL 241 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 LAPQ E ILD CAAPGGKTTH+LE++ +A+V A++ + +R+ R+ +NL RL + A ++ Sbjct: 242 LAPQPNEFILDACAAPGGKTTHLLELSDNQAKVFALEKEPERIERLSENLYRLALTAEIE 301 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 GD P QW E QFD+ILLDAPCSATG+IRRHPDIKW R DI L QLQ+ IL AI Sbjct: 302 VGDASQPDQWWPEIQFDKILLDAPCSATGIIRRHPDIKWHRTPEDITVLTQLQAAILQAI 361 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-----EQPGKQNLPGA 415 WP LK GG L+YATCSVLP+EN QI FLQ+T DA+ G + PG+Q LPG Sbjct: 362 WPRLKPGGKLLYATCSVLPQENRDQISQFLQQTPDAKEIPIGADWGITIDAPGRQILPGQ 421 Query: 416 EEGDGFFYAKLIK 428 + DGF+Y + K Sbjct: 422 DGMDGFYYCLIEK 434 >UniRef50_Q12TA7 Sun protein n=8 Tax=Gammaproteobacteria RepID=Q12TA7_SHEDO Length = 428 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 229/427 (53%), Positives = 290/427 (67%), Gaps = 7/427 (1%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINK 64 NLR++AA+A+ V+E+G SLS LP QQ V + KDKALL ELC+GV+R L QLD ++ Sbjct: 3 NLRALAAKAIFDVLEKGLSLSVALPLQQQHVQNGKDKALLAELCYGVMRQLPQLDKCVSD 62 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 +A+P GKQR +H L++VG YQL +TRIP HAA++ET E +K L ++NGVLR Sbjct: 63 CLAKPFKGKQRILHQLLLVGCYQLYFTRIPSHAAVSETAEACRQLKFDGLVKVVNGVLRN 122 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QRQ+ EL ++ +Y P+WL+KRLQ+AYP+ WQ ++E +++RPPMWLR NR + Sbjct: 123 IQRQEPEL--NTDSDTLKYNTPAWLIKRLQQAYPQDWQQVIEQSHERPPMWLRNNRLVQT 180 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD++LA L ++ PDA+ LE+P V LPGF G +VQD +AQ T LAP Sbjct: 181 RDAYLASLTNENIEASA-GLSPDAILLESPTDVLQLPGFMSGSASVQDGAAQWAATLLAP 239 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q E +LD CAAPGGKT H+LE+AP + AVD D +RL RV NL RL + A V GD Sbjct: 240 QANEVVLDACAAPGGKTCHLLEIAPNISLTAVDFDLKRLERVQQNLDRLKLTAQVIHGDA 299 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 W +FDRILLDAPCSATGVIRRHPDIKWLR++ DI ELA LQ +ILD W L Sbjct: 300 ANIDSWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKNSDIDELATLQMQILDHCWQWL 359 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP---GKQNLPGAEEGDGF 421 K GGTL+YATCS+LPEENS QI AFL RTADA L + P G Q LPG + DGF Sbjct: 360 KPGGTLLYATCSILPEENSQQINAFLTRTADASLVAISEQKNPADIGWQILPGQDNMDGF 419 Query: 422 FYAKLIK 428 +YA+L+K Sbjct: 420 YYARLVK 426 >UniRef50_B7KB91 Sun protein n=19 Tax=Cyanobacteria RepID=B7KB91_CYAP7 Length = 452 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 145/451 (32%), Positives = 231/451 (51%), Gaps = 25/451 (5%) Query: 1 MK-KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQ 57 M K++N R +A + + ++ L ++ + + D+ L+ EL +G++R Sbjct: 1 MTFKEKNPRQLALIILRDIYQKEAYTDLALDQGIKRADLGNLDRGLVTELVYGIVRRQRT 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKG 116 LD +I++L + + + ++ +GLYQL Y IPP AA+ +VE A K +L G Sbjct: 61 LDEIISQLGTKKANQQPPDLRLILHIGLYQLRYLDQIPPSAAVNTSVELAKKNKLGKLSG 120 Query: 117 LINGVLRQFQRQQEELLAEFNASD-------ARYLHPSWLLKRLQKAYP-EQWQSIVEAN 168 ++NG+LRQ+ R +E+ + P+W+++ + EQ + + E Sbjct: 121 VVNGILRQYDRIKEQGKDPLKFPSDPVNHLGVLHSFPNWIIQLWLDEFGQEQTEQLCEWF 180 Query: 169 NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP-APVHALPGFEDGW 227 NQ + +R+N + + ++ + G+K P P ++RL + LPGFE+GW Sbjct: 181 NQPAMIDIRVNLLKTTVEKVASIFSDVGVKVKPIPHLPQSLRLIGGTRSIQQLPGFEEGW 240 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRV 286 TVQD+SAQ L PQ E I+D CAAPGGKTTHI ++ + A D RL +V Sbjct: 241 WTVQDSSAQLVTHLLDPQPDEIIIDACAAPGGKTTHIAQLMGDRGTIWACDRVPSRLRKV 300 Query: 287 YDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 N +RL + + + +GD R+ +Q + DR+LLDAPCS G + + PDI+W + Sbjct: 301 QQNAERLQLNSIRICEGDSRHLTQ--FRETADRVLLDAPCSGLGTLHKRPDIRWRQTPEK 358 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE 405 I EL+QLQ+E+L+ +K G LVYATC++ P EN I AFL R + + Sbjct: 359 IAELSQLQTELLEETATWVKPKGILVYATCTLNPLENERVIAAFLDRHPSWHIQTPSSDN 418 Query: 406 --------QPGKQNLPGAEEGDGFFYAKLIK 428 + LP + DGFF KL+K Sbjct: 419 TVAAFATPSGWIKVLPHQHQMDGFFMVKLVK 449 >UniRef50_A8MH88 Sun protein n=7 Tax=Clostridiaceae RepID=A8MH88_ALKOO Length = 445 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 129/443 (29%), Positives = 216/443 (48%), Gaps = 21/443 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK--DKALLQELCFGVLRTLSQLDWLIN 63 N R A + + ++ + L S D+ LL EL +GVL +D +++ Sbjct: 2 NPREGALKVLYEINVNEAFSNIALNKELNNESYNLLDRNLLTELVYGVLENQIYIDHVLS 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + L+ +G+YQLL+ R+P AA+ ETV + + + G INGVL Sbjct: 62 QFSNFQLDKMNPYTLNLLRLGIYQLLFLDRVPSFAAVNETVNLSKKYCK-KTTGFINGVL 120 Query: 123 RQFQRQQEELL------AEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMW 175 R QR + + RY HP WL++ K + + + +++ANN++P ++ Sbjct: 121 RNVQRNRNNIKMPKPEKNRIKYLSIRYSHPEWLVQLFLKHFDVNFVEELLKANNKKPDLY 180 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 LRIN S + LL+ G +A+ ++ + ++ G++ +QD S+ Sbjct: 181 LRINTLKISVADCIQLLEAEGYVVEQSKIVEEAIVVKGIHNIEKTDFYKKGYIQIQDISS 240 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLG 294 LAP+ GE ++D+C+APGGKTTHI ++ +++A DI E +L + KRLG Sbjct: 241 MLVAKALAPKEGELVMDICSAPGGKTTHIAQLMNNKGKIIARDIHEHKLKLIDRTAKRLG 300 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + + + D++L+DAPCS G+IRR P+IK+ + +DI + +LQ Sbjct: 301 IHIIQTEKFSGDHLDESFIHKADKVLVDAPCSGLGIIRRKPEIKYRKEAQDITSIVELQY 360 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG---------TPE 405 +IL ++K GTLVY+TC++ PEEN ++ FL++ + L P Sbjct: 361 KILKTAAQYVKIEGTLVYSTCTINPEENDHIVQKFLEQHQNYTLVHLNNEYQDIILQEPN 420 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 + Q P DGFF AK + Sbjct: 421 KATIQLYPNINGTDGFFIAKFKR 443 >UniRef50_C6MTY9 Sun protein n=1 Tax=Geobacter sp. M18 RepID=C6MTY9_9DELT Length = 449 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 140/447 (31%), Positives = 223/447 (49%), Gaps = 22/447 (4%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDW 60 +N R A + ++ ++ ++ K + D+ LL EL +GVLR LD Sbjct: 2 SSKNPRRAAFDILLRIEKEKSFADILIDHELSKDMIKGADRGLLTELVYGVLRRQGTLDH 61 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I + + + V L+ +GLYQ + R+P AA+ ETV+ A + P+ G IN Sbjct: 62 IIGQFSKQRTDKLELYVLLLLRLGLYQCFFLDRVPVSAAVNETVKLAKELA-PRASGFIN 120 Query: 120 GVLRQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRP 172 +LR R ++ + A RY HP+WL + + + +++ A ++ P Sbjct: 121 AILRNADRNRDNISYPDRAENPVGYLAVRYSHPAWLTSQWCEQLGVEGAEALAAAMSEPP 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P +R+N SR++ +A L E G+ PD +RL + LP F DG TVQD Sbjct: 181 PFTIRVNTLRISREALMARLAEEGISCSETRWSPDGIRLNQSGQITRLPSFRDGLFTVQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLK 291 S+Q +L+P+ G+ +LD C+APGGKTT I ++ ++ A D++ ++L + + Sbjct: 241 ESSQLAPLFLSPEKGDRVLDACSAPGGKTTQIAQLMGNSGEIYACDVNHKKLRLIKETCD 300 Query: 292 RLGMKATVK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ + D PS E F RIL+DAPCS GVIRR+P+ KW + D+ + A Sbjct: 301 RLGITSVRTFTMDATSPSPAIKEVTFQRILVDAPCSGLGVIRRNPEGKWSKSPDDLLQQA 360 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT------- 403 + Q IL+ + +L GTL+YATCS +EN I FL+ + + T Sbjct: 361 RTQVTILENLCKYLDKSGTLLYATCSTSVQENEYVIDTFLREHPEFVAEDLRTLFPEFAP 420 Query: 404 --PEQPGKQNLPGAEEGDGFFYAKLIK 428 E+ ++ P + DGFF A+L K Sbjct: 421 LFTERGFFRSWPHRDGMDGFFAARLKK 447 >UniRef50_A6VR79 Sun protein n=2 Tax=Marinomonas RepID=A6VR79_MARMS Length = 462 Score = 486 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 171/442 (38%), Positives = 255/442 (57%), Gaps = 17/442 (3%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 Q++ R +A + + ++ Q SLS L Q V+ + +L+ELCFGV R +L+ + Sbjct: 20 QQSARQVAIKVITNILLQQGSLSTQLARHQLDVASEHAPMLKELCFGVCRQYPRLNSIAL 79 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+A P K ++ ++++GLYQL Y P HAA+ ETVE + + L+N VLR Sbjct: 80 HLLAHPFEEKDTDLYAVLLLGLYQLTYMNTPDHAAVNETVEACRILNKDWATKLMNAVLR 139 Query: 124 QFQRQQEELLAEFNA-SDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 ++QR+ ++++ A + P WL+KR K +PE + I+EA+N PPM +R+N + Sbjct: 140 RYQREADDIVEILEAQPSVEFNMPKWLVKRFNKHWPEHLEEIIEASNTHPPMCIRVNESL 199 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 SR+++ L + G+ A+ L+ V LPGF+DG+V+VQD +AQ L Sbjct: 200 VSRETYKEQLLDLGINTEKGEFSDSALYLKNAVRVGELPGFDDGYVSVQDEAAQLSAHIL 259 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEA-----QVVAVDIDEQRLSRVYDNLKRLGMKA 297 +P+ GE +LD CAAPGGKT H+LE A A ++ AV+++ R+ ++ NL+RLG A Sbjct: 260 SPKAGEKVLDACAAPGGKTGHLLEKANSAGLSSMELTAVELESWRMEKIESNLERLGYSA 319 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + D W + FD+ILLD PC+ATGVIRR+PDIK R+ DI +L +Q EIL Sbjct: 320 QLICADASDLDAWWDGEHFDKILLDVPCTATGVIRRNPDIKINRKPADIDDLVIIQREIL 379 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE-----------LCETGTPEQ 406 + +W LK+GG ++YATCS++PEEN QI+ FL DA+ E G P Sbjct: 380 NKVWTTLKSGGFMLYATCSLMPEENEQQIQHFLANQEDAKEVALNSLAADLAVEWGIPVS 439 Query: 407 PGKQNLPGAEEGDGFFYAKLIK 428 G+Q P A DGF+Y L K Sbjct: 440 HGRQLFPQANGHDGFYYCLLQK 461 >UniRef50_B1HQE5 Ribosomal RNA small subunit methyltransferase B n=5 Tax=Bacillaceae RepID=B1HQE5_LYSSC Length = 453 Score = 483 bits (1243), Expect = e-135, Method: Composition-based stats. Identities = 139/453 (30%), Positives = 214/453 (47%), Gaps = 28/453 (6%) Query: 1 MKKQR------NLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVL 52 M K+ N+R A + V + + +L + K+ KD+ALL EL +G L Sbjct: 1 MSKKSVVIWDGNVRDAALSILLAVDKNQAYSNLLLNETIKRHKIEAKDRALLTELTYGTL 60 Query: 53 RTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKR 111 + LD+ + + + V +L+ + LYQ+ Y RIP HAA+ E VE A Sbjct: 61 QHKMTLDYYLEPFIRGSI---DHWVRWLLRISLYQMQYLTRIPAHAAVNEAVEIAKRRGH 117 Query: 112 PQLKGLINGVLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVE 166 + +NG+LR RQ ++ HP WL++R Y + ++ Sbjct: 118 RGIASTVNGILRSVLRQGVPSINDIENPIERLAIETSHPIWLVQRFVNNYGLEVATGMLH 177 Query: 167 ANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDG 226 NN P +R+N T + + +A L+E G+ P+ + + P F++G Sbjct: 178 ENNVPPIQTVRVNTTKVTVEQAMAELEEEGLTAKQSDVIPECLHVTNGQP-ARTNAFKEG 236 Query: 227 WVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSR 285 +T+QD S+ L P G +LD+CAAPGGKTTH+ E+ E ++A D+ +L Sbjct: 237 HITIQDESSMIPANVLKPSPGMRVLDMCAAPGGKTTHLAEIMKNEGSILATDLHPHKLDL 296 Query: 286 VYDNLKRLGMKATVKQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 + N +RLG+ DGR ++ + +D IL+DAPCS GV+RR PDIK+ +R+ Sbjct: 297 IDHNTERLGLDIIETAPIDGRKAPEFLQAESYDAILVDAPCSGLGVMRRKPDIKYTKREE 356 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT- 403 D+ L +Q +LDA LK G LVY+TC+V +EN + AFL + E + + Sbjct: 357 DLENLQTIQLALLDAATKVLKIKGKLVYSTCTVDKQENEGTVNAFLAAHPEMEAIQLESL 416 Query: 404 -------PEQPGKQNLPGAEEGDGFFYAKLIKK 429 Q P DGFF A KK Sbjct: 417 PTKLAEKQANGMLQVFPQDFGSDGFFVAAFRKK 449 >UniRef50_P94464 Ribosomal RNA small subunit methyltransferase B n=24 Tax=Bacillales RepID=RSMB_BACSU Length = 447 Score = 483 bits (1243), Expect = e-135, Method: Composition-based stats. Identities = 143/449 (31%), Positives = 224/449 (49%), Gaps = 23/449 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQL 58 MKK ++R +A +A+ ++ + + +L + + ++SD+++ LL EL +G L+ L Sbjct: 1 MKK-TSVRDIALEALIKLEQNQAYSNLLLKSVIKSNELSDQNRGLLTELVYGTLQNKIAL 59 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 D+++ + +P + V L+ + LYQ+ Y +IP AA+ E VE A + Sbjct: 60 DYMLKPFINKP-QKVKPWVIQLLRLSLYQMEYLEKIPDRAAIHEAVEIAKIRGHKGIASF 118 Query: 118 INGVLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 +NGVLR QR+ + + HP WL+K AY E + I + P Sbjct: 119 VNGVLRSIQREGVPSFDAIEDPVRRLATETSHPEWLVKEWADAYGFEAAEKICRIHLIPP 178 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 LR+N+ R L + G++ DAV+L + F++G V++QD Sbjct: 179 KQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGT-IAGTHFFQNGEVSIQD 237 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLK 291 S+ L P++ E +LD CAAPGGK+ HI E+ + V ++D+ + ++ + + Sbjct: 238 ESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVKLIKEAAD 297 Query: 292 RLGMKATVK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ D R + +QFDRIL+DAPCS GVIRR PD+K+ ++ D LA Sbjct: 298 RLGLTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPDMKYTKKPDDSARLA 357 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL---CETGTPEQ- 406 ++Q IL I P +K GGTLVY+TC++ EN I AF+Q D E E PE+ Sbjct: 358 EIQLSILREIAPLVKKGGTLVYSTCTMDRTENDEVIHAFIQEHPDFEPDLSLEKRLPEKV 417 Query: 407 ------PGKQNLPGAEEGDGFFYAKLIKK 429 Q LP DGFF + KK Sbjct: 418 RPFVRDGRLQILPHYFGTDGFFICSMRKK 446 >UniRef50_C4ZEV6 Sun protein n=4 Tax=Clostridiales RepID=C4ZEV6_EUBR3 Length = 469 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 123/431 (28%), Positives = 212/431 (49%), Gaps = 8/431 (1%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDW 60 + R +A + + ++ E+G +L + K +S +D+A + L G + + QLD+ Sbjct: 38 SVDTRELALEMLIEINERGAFSHIVLRSVLDKYQYLSKQDRAFMTRLVDGTIEYMLQLDY 97 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLIN 119 +I+ + + + L+ + +YQ+ Y +P A E V+ A K QL G +N Sbjct: 98 IIDSFSKTKVRKMKPFIRNLLRMSVYQIKYMDAVPDSAVCNEAVKLAKRHKFAQLSGFVN 157 Query: 120 GVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRI 178 GVLR R + + +F+ RY P W++ R AY E+ + I +A + + + +R Sbjct: 158 GVLRNIARNIDSV--QFDTLSIRYSMPQWIVDRFVAAYGEKKAEEIFKAFHNKSTISIRT 215 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N T + D A L+ G+ + A + ++ L F DG VQD S+ Sbjct: 216 NLTRCTPDELRATLEAEGVTVTAVDELNYAFVISGFDYLNGLQSFRDGLFYVQDISSMLV 275 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 AP+ G++++D+CAAPGGK+THI E+ V A D+ + ++ + +N+ R G+ Sbjct: 276 AQTAAPKKGDYVIDVCAAPGGKSTHIAELLQGSGHVFARDLTDNKVDMIEENIDRHGLNN 335 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + + D ++ D PCS GV+ R DI++ + EL LQ +IL Sbjct: 336 MSAEVWDATVFDADSAGKADILICDLPCSGLGVLGRKKDIRYKMTPGSVDELVVLQRQIL 395 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 D + ++K G LVY+TC++ EN ++ F+++ + EL ++ KQ LPG Sbjct: 396 DTVHTYVKPNGVLVYSTCTIDEAENEDNVRWFIEKHPEFELDKSFAEGTGMKQILPGEHG 455 Query: 418 GDGFFYAKLIK 428 DGFF A+ IK Sbjct: 456 SDGFFIARFIK 466 >UniRef50_B0KA07 Sun protein n=11 Tax=Thermoanaerobacterales RepID=B0KA07_THEP3 Length = 444 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 128/450 (28%), Positives = 225/450 (50%), Gaps = 30/450 (6%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQL 58 MK R +A + +++V+ + + + ++ + D+ +EL FGV+ L Sbjct: 1 MKP----REIAYKILQEVLSKEAYANISFNKHLKGQELKEIDRGFTKELVFGVIERKYTL 56 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 D++++ + + + +GLYQLLY ++P +AA+ ETV A + + Sbjct: 57 DFILSFFVKK---APDLKTMIFLEMGLYQLLYMDKVPSYAAINETVNIAKKVLGIKRANF 113 Query: 118 INGVLRQFQRQQEELLAEFNASDAR------YLHPSWLLKRLQKAYPEQ-WQSIVEANNQ 170 IN VLR + R++E ++ D + Y +P W+++RL Y E+ ++++++ N+ Sbjct: 114 INAVLRNYDREKERVIFPDKERDLKQYLKVTYSYPDWIVERLLNNYDEEKAEALLKSLNE 173 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 RP + R+N + LLD G+ +A+ + P + +++G++ + Sbjct: 174 RPEICYRVNTLKIDIEDLKRLLDSDGIAYKKGYYLEEALYIYIKNP-ESHQLYKEGFIYI 232 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 QD ++ L P+ GE ++D+CAAPGGKTTHI ++ +VVA D+ RL + +N Sbjct: 233 QDEASMLVSKILNPKEGETVIDVCAAPGGKTTHIAQLMKNNGKVVAFDLHPHRLELIKEN 292 Query: 290 LKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKW-LRRDRDIPE 348 KRLG+ + ++ D++L D PC+ G+IR+ PDIK ++I E Sbjct: 293 CKRLGITNVKTEAFDSTFVNKKYLEKADKVLADVPCTGIGIIRKKPDIKLKNYTRKEISE 352 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG 408 L + Q +ILD+ ++K GG LVY+TC++ EEN I FL+ D +L + G Sbjct: 353 LIETQYKILDSSSKYVKKGGFLVYSTCTIGKEENQNVIMKFLKEHPDFKLVDIKAEMPSG 412 Query: 409 K----------QNLPGAEEGDGFFYAKLIK 428 Q P E DGFF +KL + Sbjct: 413 LNIETASLGYVQTTPLEHEIDGFFISKLRR 442 >UniRef50_C0GIQ4 Sun protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIQ4_9FIRM Length = 451 Score = 479 bits (1233), Expect = e-134, Method: Composition-based stats. Identities = 148/447 (33%), Positives = 221/447 (49%), Gaps = 20/447 (4%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLD 59 K++ + R + A+++V ++ L + + +DK L E+ +GV+ LD Sbjct: 4 KRKIDAREASLLALQRVEADDAYVNLALDEVLSSHSLDPRDKRLAAEITYGVITYKLTLD 63 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 WLI K+ RP+ + +H ++ +G YQL Y R+PP AA+ TVE K+ L + Sbjct: 64 WLIEKVSGRPIKKLDKPIHQILRIGFYQLFYLDRVPPAAAVHATVELVKKGKKRGLAPFV 123 Query: 119 NGVLRQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 NGV+R R+++ L RY HP WL++R Y E+ + +V ANNQ Sbjct: 124 NGVMRGALRKKDHLPWPDKKKDSANYLSVRYSHPLWLVRRWLNRYGPEEAEKLVAANNQA 183 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P+ +R+N RD+ L+ L AG++ P P+ L + L + +G VQ Sbjct: 184 APLSIRVNTLRTDRDTLLSELTAAGVEAVPSTVVPEGALLTRSGRLTELAPYREGRFQVQ 243 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNL 290 SA L PQ G+ +LD C+APGGKTTH+ ++ ++A+DI RL V N Sbjct: 244 GESAMLTSRVLDPQAGDAVLDGCSAPGGKTTHLAQLMNNSGDILALDIHPHRLELVKANC 303 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 +R+G+ Q FD ILLD PCS GVIRR PD+KW R + DI +LA Sbjct: 304 RRMGVDIVRTQCLDAREIAKENPDSFDCILLDVPCSGFGVIRRKPDLKWRRSEDDIRKLA 363 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT------- 403 +Q ++L A LK GGTLVY+TC+ PEE ++ L+ D + Sbjct: 364 HVQCDMLKAAAAVLKPGGTLVYSTCTNEPEETDEVVEELLKNQDDMVPDDLRPYLPQDWQ 423 Query: 404 --PEQPGKQNLPGAEEGDGFFYAKLIK 428 + G LP DGFF ++L K Sbjct: 424 QDAGKTGIHLLPHIHGVDGFFISRLKK 450 >UniRef50_Q8EKR0 Ribosomal RNA small subunit methyltransferase B n=20 Tax=Gammaproteobacteria RepID=RSMB_SHEON Length = 428 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 221/427 (51%), Positives = 284/427 (66%), Gaps = 7/427 (1%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINK 64 NLR++AA+A+ V+E+G SLS LP Q+ + S KDKALL ELC+GV+RTL Q++ + Sbjct: 2 NLRALAAKAIFDVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRTAE 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 +A+P+ GKQR +H L++VG YQL +TRIP HAA++ET E +K + ++NGVLR Sbjct: 62 CLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLRN 121 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QRQ L E Y P WL+KRL+ AYP WQ I++ +++RPPMWLR NR S Sbjct: 122 IQRQLTPLSNESETLS--YNTPGWLIKRLKTAYPGNWQEIIQQSHERPPMWLRNNRLSQS 179 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD +LA LD+ + DA+ L P V LP F +G +VQD +AQ T LAP Sbjct: 180 RDEYLAALDKLEIDASA-GLSDDAILLAAPKDVATLPLFLEGAASVQDGAAQWAATLLAP 238 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q E ILD CAAPGGK+ H+LE+ P +++AVD D +RL RV NL RL +KA V GD Sbjct: 239 QANELILDACAAPGGKSCHLLELEPSIKLIAVDFDAKRLERVQQNLDRLSLKAEVIHGDA 298 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 W +QFDRILLDAPCSATGVIRRHPDIKWLR++ DI ELA+LQ +ILD W L Sbjct: 299 ANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWL 358 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAE---LCETGTPEQPGKQNLPGAEEGDGF 421 K GGTL+YATCS+LP+EN QI AFL RTADA+ L + + + G Q PG DGF Sbjct: 359 KPGGTLLYATCSILPQENRDQISAFLARTADAKLDTLVQQASSQDIGWQITPGQHNMDGF 418 Query: 422 FYAKLIK 428 +YA+L+K Sbjct: 419 YYARLLK 425 >UniRef50_B0A9Y2 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0A9Y2_9CLOT Length = 441 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 120/445 (26%), Positives = 220/445 (49%), Gaps = 23/445 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQL 58 MK R++A + + + + + + + + ++D+ E+ +GV+ L Sbjct: 1 MKS----RNLAYKVLFDIEKNQNYSNMAINKHFKDCNLDNRDRGFATEIIYGVVENKIYL 56 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGL 117 D++I+KL V L+ +G+YQ+L+ + +AA+ ETV + + G Sbjct: 57 DYIIDKLSKIKSNKLNLKVKILLRMGIYQILFLDSVSDYAAVNETVNLTKKLDN-RSAGF 115 Query: 118 INGVLRQFQRQQEEL-----LAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQR 171 +N VLR RQ+E++ + +Y + W+++ + + + ++EAN +R Sbjct: 116 VNAVLRNVIRQKEDIGEVKIKDTVDNLATKYSYNKWIVRNWISNFGREFTEDLLEANTER 175 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P ++LR+N +RD + LL+E + +A+++ + ++ G TVQ Sbjct: 176 PSIYLRVNTLKTTRDELIKLLEEQEVNCEKVPFMDEAIKVNNLKNIENNELYKKGLFTVQ 235 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 D S+ L PQ +LD+C+APGGKTTHI + QV++ DI E ++ + +++ Sbjct: 236 DISSMLVGKILNPQKDTKVLDVCSAPGGKTTHIATLMENSGQVISRDIFEHKIKLIQNSV 295 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+K Q +FD +L D PCS G+I+R P+IK+ + +I +L Sbjct: 296 NRLGLKNVDVQLFDALNLDKDSIDKFDSVLADVPCSGLGIIKRKPEIKY-KEKEEIKDLP 354 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL-------CETGT 403 +LQ +IL ++K GGTL+Y+TC++ +EN +++FLQ +L + Sbjct: 355 KLQKQILQNAAKYVKVGGTLIYSTCTIQDDENIEVVESFLQSNKRFKLEKIENINIDLEN 414 Query: 404 PEQPGKQNLPGAEEGDGFFYAKLIK 428 ++ + P DGFF AKL + Sbjct: 415 EDKGYLKIYPNVHGMDGFFIAKLKR 439 >UniRef50_C9RZP8 Sun protein n=5 Tax=Bacillales RepID=C9RZP8_GEOSY Length = 444 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 150/444 (33%), Positives = 215/444 (48%), Gaps = 22/444 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R +A + + ++G L QK + +D ALL E+ +G ++ LD+ + Sbjct: 2 NVRELALDTLLAIEQKGAYSHLQLNEAIQKGRLDGRDAALLTEIVYGTVQRRDTLDYYLA 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + R + V L+ + LYQ++Y R+P AA+ E VE A + L+NGVL Sbjct: 62 PFL-RKARRLEPWVRVLLRLTLYQMVYLDRVPDRAAVFEAVEIAKRRGHRGIASLVNGVL 120 Query: 123 RQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 R R+ E + HP WL++R + Y E+ + E N + P R Sbjct: 121 RAIGREGLPSIEAVDDAGKRLALATSHPEWLVRRWIQQYGYEEAARMCETNLRPPQSTAR 180 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 +NR + + L L GM+ P P+A+R E + F GW+T+QD S+ Sbjct: 181 VNRLRATVEEALERLRAEGMQVIPGHVAPEAIRAEKG-NLAHTETFRAGWLTIQDESSML 239 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L P GE +LD CAAPGGKTTHI E +VVAVDI E ++ + KRLG+ Sbjct: 240 VARALDPAPGERVLDCCAAPGGKTTHIAERMDGRGEVVAVDIHEHKVMLIEQQAKRLGLD 299 Query: 297 ATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 D R + + FDR+L+DAPC+ GVIRR P+IK+ + I L ++Q Sbjct: 300 NVATLSLDSRRLGERFAPESFDRVLVDAPCTGFGVIRRKPEIKYTKGKDAIAALVEIQQA 359 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----------GTPE 405 IL A P LK GGTLVY+TC+V EEN I FL D L + + Sbjct: 360 ILRAAAPLLKKGGTLVYSTCTVEREENEEAIARFLADHPDFFLDASLAERMPKPVRPHVK 419 Query: 406 QPGKQNLPGAEEGDGFFYAKLIKK 429 Q LP + DGFF A+L K+ Sbjct: 420 GGMLQLLPHHFDSDGFFIARLRKR 443 >UniRef50_A0Q113 Sun protein n=35 Tax=Clostridium RepID=A0Q113_CLONN Length = 443 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 128/445 (28%), Positives = 212/445 (47%), Gaps = 21/445 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQL 58 M+K R + +E V + + +L K + DKDK L+ E+ +G ++ + Sbjct: 1 MEK---ARKICVDILEVVFNKNAYSNIVLRQTLNKNKIDDKDKGLITEIVYGTIKYKYTI 57 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 D ++N + + + V ++ + +YQ+ + +IP AA+ E VE A K L Sbjct: 58 DTILNNFLKKGIKSLDSYVLNILRITVYQIKFLDKIPNFAAVNEAVEIAKKEKSVGASKL 117 Query: 118 INGVLRQFQRQQE----ELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRP 172 +NGVLR + R + +Y + WL+ L K Y + + I++ N+RP Sbjct: 118 VNGVLRNYLRNLDKKYYNDKNLVETLCFKYSYDKWLVNMLIKQYGNEIAEDILKGLNERP 177 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 + +R+N D + L+E G P+A+ + + P F++G +TVQD Sbjct: 178 AVTVRVNNLKTDHDEAFSNLEEYGYDVEEGYICPEAIVINKGKSIEKNPLFKEGKITVQD 237 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNLK 291 SA + + G +LDLC+APGGKTTHI E+ +V A DI E +LS V +N K Sbjct: 238 ESAMLVAPSIDAKEGATVLDLCSAPGGKTTHISEIMNNTGIVKAFDIHENKLSLVKENAK 297 Query: 292 RLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 RLG+ E D +L+D PCS G+IR+ P+IK+ + + ++ Sbjct: 298 RLGIDNISCAEMDASKFNKELENSADMVLIDVPCSGLGIIRKKPEIKYTKDIKSTKDIVA 357 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------- 404 +Q +I++ ++K GTL+Y+TC++ EEN I F+++ + ++ Sbjct: 358 IQKKIMENAAKYVKKEGTLLYSTCTINKEENEKNINWFIKKFPEYKVEPLFYGNMSNIIY 417 Query: 405 -EQPGKQNLPGAEEGDGFFYAKLIK 428 E LP DGFF AKL K Sbjct: 418 NENGTVTILPNKY-MDGFFIAKLKK 441 >UniRef50_B9M341 Sun protein n=4 Tax=Geobacter RepID=B9M341_GEOSF Length = 448 Score = 473 bits (1217), Expect = e-132, Method: Composition-based stats. Identities = 140/448 (31%), Positives = 221/448 (49%), Gaps = 22/448 (4%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDW 60 N RS A + + ++ ++ ++ + D+ LL EL +GVLR + LD Sbjct: 2 SSSNPRSAAFEILLRIDKERSYADILIDRELSAGALQGPDRGLLTELVYGVLRRQATLDH 61 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I + ++ + +R+V L+ +GLYQ+ Y R+P AA+ ETV+ A + P+ G IN Sbjct: 62 IIRRFSSQRLERLERSVLLLLRIGLYQMFYLDRVPVSAAVNETVKLAKVLV-PRASGFIN 120 Query: 120 GVLRQFQRQQEEL------LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 VLR R+++ + Y HP WL ++ + + A + P Sbjct: 121 AVLRNADRERDHISYPDREKDPAAYLATVYSHPVWLAAAWIGQLGLDEAEMLARAMAEPP 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 + +R N +R + +L G++ P A+R+ V L F DG VQD Sbjct: 181 AITVRTNTLKTTRQQLMEILSAEGVQCETGRFSPMAIRINLSGSVSRLKSFRDGLFFVQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLK 291 S+Q +L PQ GE +LD CAAPGGK+T + ++ +++A D+ ++L V +N Sbjct: 241 ESSQLAAMFLGPQAGERVLDACAAPGGKSTQLAQLMGDRGEILACDVIGRKLKLVDENAA 300 Query: 292 RLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ + D P + DRILLDAPCS GVIRR+P+ KW + D+ +LA Sbjct: 301 RLGISSIRTVLLDTARPLKSLERSPLDRILLDAPCSGLGVIRRNPEGKWWKSAADVIDLA 360 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ---- 406 + Q +L+ + HL++GG+L+YATCS EEN I+AFL R + + + Sbjct: 361 KGQRALLENLAGHLRSGGSLLYATCSTAVEENEAVIEAFLSRHDEFVIEDLRLLFPDLAE 420 Query: 407 -----PGKQNLPGAEEGDGFFYAKLIKK 429 + P DGFF A+L KK Sbjct: 421 LFTPAGFFRAWPHRHGMDGFFAARLKKK 448 >UniRef50_D1BMC4 Sun protein n=3 Tax=Veillonella RepID=D1BMC4_VEIPT Length = 451 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 126/444 (28%), Positives = 213/444 (47%), Gaps = 20/444 (4%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDW 60 +Q+N+R +A +A+ ++ G + L QK +SD D+ EL +GV+R + LD Sbjct: 8 QQQNIRLLAVKALSEINRNGAYANIKLQEYLQKYHLSDLDRRFFTELVYGVIRRKNYLDA 67 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I RP+ V ++ +G+YQ++Y ++P AA+ E+V+ A + R L G +N Sbjct: 68 IIVFFAKRPIKKLSSMVLEILRLGIYQIIYMDKVPESAAVNESVKLAKKLTR-GLSGFVN 126 Query: 120 GVLRQFQRQQEEL------LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 VLR R+ + + +E Y P WL+ K ++ + N++P Sbjct: 127 AVLRSVLRESDSISIGELAKSEAEEISFIYNQPLWLVNFWIKEMGKDKTVDLCAWFNEQP 186 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQ 231 + RIN S + L L++ P+ V ++ + DG +T Sbjct: 187 RLTSRINTVKVSIEDCLKELEDLDWIVEQDTYIPEVVYIDGHQGHLEKAKPVLDGHITFM 246 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNL 290 D ++ + PQ GE ILD CAAPGGK+ H+ + +++ DI + +L + N Sbjct: 247 DKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDHKLELINQNA 306 Query: 291 KRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 +RLG+ K DGRY ++QFDR+L+DAPCS G++++ D++W + + + EL Sbjct: 307 ERLGVSIISTKLQDGRYLPDNW-KEQFDRVLVDAPCSGLGILQKKLDMRWRKTESLLIEL 365 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP-- 407 LQ EIL+ +K G LVY+TC++ EN + FL + + P Sbjct: 366 PPLQLEILEKASKMVKVNGYLVYSTCTMNSGENEAVLNKFLAIHKNFIIDPVSYKGAPQA 425 Query: 408 ---GKQNLPGAEEGDGFFYAKLIK 428 P + DGFF A++ + Sbjct: 426 IDGMITTYPPRDHMDGFFMARMKR 449 >UniRef50_Q2BQD6 Fmu, rRNA SAM-dependent methyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQD6_9GAMM Length = 432 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 185/434 (42%), Positives = 267/434 (61%), Gaps = 10/434 (2%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 M K N+R++AAQA+ +++ SL+ P ++++ +DKD+ LL+ELC+G LR QL+ Sbjct: 1 MTK--NIRTLAAQALTPLLQNKGSLNTKYPAIERRCADKDRGLLRELCYGTLRYYPQLNR 58 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 ++ L RP K V L +VGLYQ+ +TRIP HAA+ ETVE + +P L+N Sbjct: 59 VLQLLQNRPFKYKDIDVRALALVGLYQIQHTRIPAHAAIHETVEACKELNKPGAAKLLNA 118 Query: 121 VLRQFQRQQEELLAEFN-ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRIN 179 +LR+FQR+Q+++ +E Y H W++ +L+ +P+ WQ+I+EANN++ P+ LR+N Sbjct: 119 ILRRFQREQDDITSELKGEDSYLYNHSEWMIAKLKNNWPDHWQAILEANNEQAPLTLRVN 178 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 R SR+ + L+ + P +RL V +LPG++ G +VQD +AQ Sbjct: 179 RRSISREEFQQQLNPV-IDSDPTVFSDQGLRLAESVNVESLPGYQVGAFSVQDEAAQLSA 237 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L + + +LD CAAPGGK HILE P+ A V AV+++ +R R+ +NLKRL +KAT Sbjct: 238 DLLDLKPQQRVLDACAAPGGKLCHILESEPKLASVEAVELEAKRAERIEENLKRLRLKAT 297 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + GD W +DRILLDAPCSATGVIRR+PDIK+LR+ DI ELAQ+QS+IL Sbjct: 298 LHIGDASE-QSWWDGDLYDRILLDAPCSATGVIRRNPDIKFLRKGEDIHELAQIQSDILA 356 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPG 414 W LK GG L+YATCS+ P+EN QIK F+ +DA+ G + G+Q P Sbjct: 357 NCWAMLKPGGKLLYATCSIFPQENERQIKRFISNNSDAKHLAIDASWGIEREFGRQLFPE 416 Query: 415 AEEGDGFFYAKLIK 428 DGF+YA L K Sbjct: 417 KGGHDGFYYALLEK 430 >UniRef50_B8FS79 Sun protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FS79_DESHD Length = 453 Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 128/452 (28%), Positives = 214/452 (47%), Gaps = 26/452 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLD 59 M K + R++A Q + ++ E+ + ++ + +++ L L G L+ LD Sbjct: 1 MDKITS-RALAVQILRRIEEEKAYANLVMQKALHDLSDPRERQLATLLVNGTLKHRLTLD 59 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLI 118 + + + + +P++ V +++ + Q+LY RIP A+ E VE + + L+ Sbjct: 60 YALRRHLRKPLSQLPHEVRWILRISALQILYLSRIPAAVAINEGVELTKKQQG-KYTSLV 118 Query: 119 NGVLRQFQRQQEELL------AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 N VLR+ ++L RY HP W++KR K Y +++ +ANN+ Sbjct: 119 NSVLRRVLETGWDMLWPSKEKEPVRFLSLRYSHPEWMVKRWLKRYGMADTEALCQANNEP 178 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P+W+R N SR A L+ G+K P+++ +E + LP F++G TVQ Sbjct: 179 APVWIRTNTLKISRADLQARLEGEGVKVTIGERVPESLVIEDFGSLDKLPSFQEGHFTVQ 238 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 D S+Q L PQ G+ +LD C APGGKTTH+ + + +++A DI ++ + D Sbjct: 239 DESSQLIAHVLNPQAGQKVLDACGAPGGKTTHLAQRMENQGEILAFDIHPHKVKLIEDLA 298 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ Q + ++L+DAPCS GV+RR D++W + + +I L Sbjct: 299 ARLGITIIRAQAGDARELAGVKDASCHKVLVDAPCSGLGVLRRRADMRWHKEEDEIKTLP 358 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------ 404 LQ IL+ + GG LVY+TC++ PEEN +KAF + + Sbjct: 359 ALQLAILERAAQCVAAGGELVYSTCTIEPEENFEVVKAFRANHPEFITVDFSGELPYSLA 418 Query: 405 --------EQPGKQNLPGAEEGDGFFYAKLIK 428 + Q LP + DGFF AK + Sbjct: 419 SEQDRKQAAKGFLQILPHKQGMDGFFLAKFRR 450 >UniRef50_Q2SQX3 Sun protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQX3_HAHCH Length = 447 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 181/437 (41%), Positives = 254/437 (58%), Gaps = 8/437 (1%) Query: 1 MKKQR--NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQL 58 MK+++ + R+ AA+ + V E+G+SL+ + P ++V + D++ LQ LC+G R L Sbjct: 1 MKRRKTLSARAAAAKTLRAVAEEGRSLTTAMAPALEQVEENDRSFLQALCYGACRHYLTL 60 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLI 118 + + +L+ +P+ K+R +H+L++ GL+QL + P H ++ ETV + + L+ Sbjct: 61 EHWLGQLLRQPIKAKERDIHFLLLSGLHQLAFMDKPAHVSINETVNVTKELNKLWATKLV 120 Query: 119 NGVLRQFQRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLR 177 NGVLR FQR+++ELLA A RY P WLL +L AYP Q ++ A+N + P+ LR Sbjct: 121 NGVLRSFQRRKDELLARSEADPSLRYAMPRWLLDKLSAAYPHQLDELLAASNAQAPLTLR 180 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGF-EDGWVTVQDASAQ 236 +N R+ +L L E + V+ E V LPGF + G +VQD +AQ Sbjct: 181 VNLQKVQREDYLNQLREVEVGAHSCEWAETGVQCEHAVDVSRLPGFFDAGLCSVQDEAAQ 240 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 + + PQ E +LD C APGGKT +LE P V AVD+D +R R D L+RL ++ Sbjct: 241 LSASLVDPQPNERVLDACCAPGGKTAALLERTPTISVTAVDVDPERQLRTRDTLQRLQLE 300 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 A V+ D QW FDRILLDAPCSATGVIRRHPDIK LRR DIP+LA+LQ ++ Sbjct: 301 ADVRTADIGDLQQWWDGTPFDRILLDAPCSATGVIRRHPDIKLLRRSEDIPQLAELQLKL 360 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNL 412 L +W LK G LVYATCS+L EEN I+ F+ DAE+ G G Q L Sbjct: 361 LRTLWTTLKPEGLLVYATCSILKEENEHIIERFIADATDAEVIPIEGKYGIQSPFGVQLL 420 Query: 413 PGAEEGDGFFYAKLIKK 429 P DGFFYA+L K+ Sbjct: 421 PVTGGHDGFFYARLRKQ 437 >UniRef50_UPI0001C335A0 ribosomal RNA small subunit methyltransferase RsmB n=3 Tax=Cyanobacteria RepID=UPI0001C335A0 Length = 453 Score = 467 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 133/451 (29%), Positives = 219/451 (48%), Gaps = 25/451 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQL 58 MK N R + + + ++ + ++ L + ++S +D+ L EL +G++R L Sbjct: 1 MK-VSNARQLVLKILREIDKNNSFINISLDSAFKHNELSRQDRGLCTELVYGIIRCQRTL 59 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGL 117 D LI++L + + + ++ +GLYQLLY +P AA+ +V+ A L + Sbjct: 60 DSLIDQLGNKKSQKQSPVLRRILHIGLYQLLYLDHVPLSAAVNTSVDLAKNNNLNVLSKV 119 Query: 118 INGVLRQFQR--QQEELLAEFNAS-----DARYLHPSWLLKRLQKAYPEQW-QSIVEANN 169 +N +LR++ R ++E + +Y P+W++K + + + N Sbjct: 120 VNAILREYIRVKKKENCKLILSKDFVNTTAIKYSFPNWIVKNWYQQWGGDTSVKLCYWFN 179 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP-APVHALPGFEDGWV 228 Q P + +R+N + L A + P ++RL+ + LPGF G Sbjct: 180 QSPTIDIRVNVLGKTTQEIKNELIMANVNVEYLPHLPCSLRLKGQTGDIKNLPGFIKGDW 239 Query: 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVY 287 TVQD SAQ L P+ GE ++D CAAPGGKTTHI E+ + ++A D RL+++ Sbjct: 240 TVQDISAQLVSYLLDPKIGETVIDACAAPGGKTTHIAELMRDKGLILACDRISSRLTKIQ 299 Query: 288 DNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 N++RL +++ + +GD RY Q DR+L+DAPCS G + R+PDI+W + I Sbjct: 300 QNIERLKLRSIKLVKGDSRYLQQ--FNNFADRVLVDAPCSGLGTLHRNPDIRWRQTPEKI 357 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA--------EL 398 +L+ +Q EILD +K G LVY+TC++ EN + FL+ + +L Sbjct: 358 KQLSIIQQEILDKASKWVKPNGVLVYSTCTLNVSENETIVCNFLKNNPEWNIEKPLFSKL 417 Query: 399 CETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 Q LP DGFF KL K Sbjct: 418 FSPFITSSGWLQTLPHEHNMDGFFMVKLRKN 448 >UniRef50_C0WD86 SUN protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD86_9FIRM Length = 445 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 126/443 (28%), Positives = 208/443 (46%), Gaps = 15/443 (3%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQL 58 M +N R +A ++++ E+G + L + +S D+ L EL +G ++T L Sbjct: 1 MHDAQNPRELALLVLDEIYERGAYANLALNKALRGNGLSSLDRKLCTELVYGTVKTTGTL 60 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 DW + +++ RP + ++ +G YQ+LY RIP AA+ E A L Sbjct: 61 DWYLCRVINRPFRKMAPRLRTILRMGAYQILYLERIPDSAAVNECANLARYYVNENSVKL 120 Query: 118 INGVLRQFQRQQEELLAEFN------ASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +NGVLRQ R + Y HP WL++R + + + +++ +N Sbjct: 121 VNGVLRQLSRTKATWQFPQKEEDATLRLALTYYHPEWLVRRWKFRFGLPEAEAMCAYDNA 180 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P + LR+N SR + L L G + P PD + + L ++ + Sbjct: 181 VPSLCLRVNTLFISRKTLLERLQADGCEVEPSKWSPDGIVCRHLPSLETLMKEWGRFLYI 240 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 QD S+ LAP+ G+ +LD CAAPGGKTTH+ + + +++A+DI + RL+ + +N Sbjct: 241 QDESSMLDADVLAPKPGDLVLDFCAAPGGKTTHLAQKMENKGKIIAMDIHDHRLTLIEEN 300 Query: 290 LKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 RLG+ E + D +L+DAPCS GV+ R + +W +++R + + Sbjct: 301 ATRLGITNIRALLHDGTKPLPGFENRADAVLVDAPCSGLGVLNRRAEARWTKKERTLSQF 360 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----LCETGTPE 405 LQ +IL +K GG L+Y+TC++ +ENS AFL+ + L Sbjct: 361 PPLQKKILAQAAACVKPGGRLLYSTCTLERDENSRVRTAFLESHPEFRSKAFLHPVTGER 420 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 Q LP + DGF+ A K Sbjct: 421 VEELQILPWRDGIDGFYLALFEK 443 >UniRef50_P72943 Ribosomal RNA small subunit methyltransferase B n=4 Tax=Chroococcales RepID=RSMB_SYNY3 Length = 446 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 150/444 (33%), Positives = 217/444 (48%), Gaps = 20/444 (4%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLI 62 + R +A + + + + QK +S D+ EL +GV+R LD LI Sbjct: 2 ISARQLAFLILRDINRRDSYTDVAIDRALQKHPLSPPDRRFCTELVYGVVRRQRTLDCLI 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGV 121 +L RP+ + + ++ +GLYQL Y +P AA+ V+ A A L ++NG+ Sbjct: 62 EQLGDRPIGKQPPDLRRIVQLGLYQLRYLDQVPASAAVNTGVDLAKANGLKGLSKVVNGM 121 Query: 122 LRQFQRQQEELLAEFNASDA----RYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWL 176 LR++QR +E+ + +Y P WL++ ++ + + + +S+ NQ P + L Sbjct: 122 LRRYQRAEEQGKNILDQEKISLGEQYSFPDWLMELFEQTWGKAETESLCAYFNQNPSLDL 181 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP-APVHALPGFEDGWVTVQDASA 235 RIN SR L E + A P +RL + LPGF +GW TVQDASA Sbjct: 182 RINPLKTSRVEVAQSLAELNLTTTAMAGLPQGLRLGGKTGAITQLPGFAEGWWTVQDASA 241 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLG 294 Q L PQ E I D+CAAPGGKTTHI E+ + Q+ A D RL ++ +RLG Sbjct: 242 QWVAQILNPQPEETIFDVCAAPGGKTTHIAELMGDQGQIYAGDRHGWRLQKLAVTQQRLG 301 Query: 295 MKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + + + +GD P + DR LLD PCS G + R+PD++W + I L LQ Sbjct: 302 LTSIKIWEGDLTQPGVKPPVELVDRALLDVPCSGLGTLHRNPDLRWRQTPATIATLLPLQ 361 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG----- 408 +L AI P +K+GGTLVY+TC++ P EN QI+ FLQ D G Sbjct: 362 QALLKAIAPLVKSGGTLVYSTCTLNPAENEAQIERFLQDHEDWRSEPFEWTSPQGQTNSV 421 Query: 409 ----KQNLPGAEEGDGFFYAKLIK 428 LP DGFF A L K Sbjct: 422 TSGMLTILPHHHHQDGFFIANLKK 445 >UniRef50_Q2RK22 Sun protein n=3 Tax=Clostridia RepID=Q2RK22_MOOTA Length = 457 Score = 464 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 143/451 (31%), Positives = 215/451 (47%), Gaps = 25/451 (5%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLD 59 K + R A Q + +V E+G L + + + +++AL EL + ++ LD Sbjct: 5 KPAVSAREAALQVIYRVTEEGAYAGLALDEVLKSAGLDGRERALATELAYSAIKAWGTLD 64 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLI 118 W + + +P+ + ++ +G QLLY RIPP AA+ ETVE A GL+ Sbjct: 65 WALGLFLRQPLEKLPPWIRCVLRLGATQLLYVPRIPPRAAIYETVELAKKYGHRGTTGLV 124 Query: 119 NGVLRQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 NGVLR RQ++ L RY HP WL++R + + ++ + + A+N+ Sbjct: 125 NGVLRHLDRQKDALPYPDWKTDPAGYLALRYYHPRWLVERWLEEFGYQETEYLCRADNEP 184 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 PP R+N +D A L G P P+ + +E + A P F++G VQ Sbjct: 185 PPTIARVNTLKTRKDVLAARLQAEGATVRPARYAPEGLVVEGLGALEASPSFQEGLFYVQ 244 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 D +Q L P +G ++D AAPGGKTTH+ ++ ++A D+ RL + N Sbjct: 245 DEGSQLVSHALHPDSGAWVIDASAAPGGKTTHLAQLMADRGTILACDVHRGRLDLIAANC 304 Query: 291 KRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 +RLG+ D R + D +L+DAPCS GV+RR PD +W + EL Sbjct: 305 RRLGVTCVRTVLVDARELGERY-PAAADYLLIDAPCSGLGVLRRRPDARWRKEAPRTREL 363 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL--CETGTPEQP 407 A+LQ IL LK GG LVY+TC++LPEEN ++ FL+R + E P P Sbjct: 364 ARLQLAILMGARQALKPGGVLVYSTCTLLPEENQEVVREFLERAGEFRPDSLEPWLPVLP 423 Query: 408 ----------GKQNLPGAEEGDGFFYAKLIK 428 Q LP DGFF A++ K Sbjct: 424 PDLMVTARQGWVQFLPQRHGTDGFFIARIKK 454 >UniRef50_Q3AC21 Sun protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AC21_CARHZ Length = 440 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 138/440 (31%), Positives = 216/440 (49%), Gaps = 20/440 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINK 64 NLR + + + +V + ++ +LP L ++ K DK + EL +GVL+ L LD++ K Sbjct: 2 NLRELVIKTLVEVEKNNSYVNLLLPKLIANLAKKEDKDFVVELTYGVLKQLKLLDYMAGK 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+ + + V I VGLYQL + ++P +AA+ ETVE R G++NGVLR Sbjct: 62 LLKKR-SKLPPFVINAIRVGLYQLYFLDKVPTYAAINETVEAVKRNYR-GFTGVVNGVLR 119 Query: 124 QFQRQQEEL-----LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 F R++EE+ E Y HP W++KR Y + I++ NN +P + LR Sbjct: 120 NFIRRREEITKIDVSDEVEYLAIAYSHPEWMVKRWLNQYGYTKTVEILKYNNHQPNLTLR 179 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 IN S ++ LL+E + P+ V + V LPG+++G +QD + Sbjct: 180 INTLKISPKAYCDLLNEKNINFKQLPYLPEGVVILDKVGVKELPGYDEGLFYIQDTGSMF 239 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 + P+ +D CAAPGGK+TH+ ++ + + A D+ RL + +N RLG+ Sbjct: 240 IAYLINPEPNSVGIDACAAPGGKSTHLAQLMGNKGIIYAFDVHPGRLKLIEENAHRLGIN 299 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 + + IL D PCS TGV+ R PD +W + + +I +L+Q Q EI Sbjct: 300 IIRCLLGDATRLKLPDGVNPNWILADVPCSGTGVLARKPDARWQKSEEEIIKLSQYQLEI 359 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG--------TPEQPG 408 L + L G LVY+TCS+ PEEN ++ FL++ + L + Sbjct: 360 LTNLSKLLPPEGILVYSTCSIEPEENEGVVENFLRKNPNFVLVKPPEWFFNLGIVKNNYY 419 Query: 409 KQNLPGAEEGDGFFYAKLIK 428 + LPG DGFF L K Sbjct: 420 LRLLPGEIG-DGFFGVILKK 438 >UniRef50_D1KD39 Ribosomal RNA small subunit methyltransferase B n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KD39_9GAMM Length = 423 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 169/431 (39%), Positives = 248/431 (57%), Gaps = 17/431 (3%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 + N R++A A+ VV +SLS+ + D+D AL + L FG +R QL+ + Sbjct: 4 TNKSNTRAVALDAICSVVLDKRSLSSFV------YPDQDDALAKSLVFGTIRFYHQLNDI 57 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + L+ + + +H L+++G YQ+LY+++ HA++ ETV+ + + KGL+N + Sbjct: 58 VTDLLNHSLEKEDLDIHCLMLLGAYQILYSKVAIHASIFETVDTLNFLDKTWAKGLVNAI 117 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 LRQ R ++ LLA+ Y HP+WL+K++++ YP+ ++ I NN + PM +R++ Sbjct: 118 LRQIDRDKDSLLAQ-----THYSHPTWLVKKIKQNYPDDFEQIFTQNNTQAPMTIRVHP- 171 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 S D + L ++ P A+ L+ P V+ LP FE G VQDASAQ Sbjct: 172 KSSVDDYQQSLANENVQSNKLEITPQALILDKPMSVYDLPDFESGSCYVQDASAQLAANL 231 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 L P+N + ILD C+APGGK TH+ E+AP A +VA+D +RL RV N +R + Sbjct: 232 LDPKNNDVILDACSAPGGKATHLCELAPNATIVALDNSSERLERVKQNTQRFNIDNIEII 291 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 W + F++ILLDAPCSATGVIRRHPDIK LR+ +DI L +LQ++IL +W Sbjct: 292 KGNAQQQDWWDGELFNKILLDAPCSATGVIRRHPDIKLLRKPKDITNLVKLQAKILANLW 351 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEE 417 LK G L+YATCS+L EN QI FL+ DAE + G GKQ LP + E Sbjct: 352 SMLKPDGVLLYATCSILKSENEDQITHFLESHPDAEEIKTNLDWGIDSFVGKQQLP-SHE 410 Query: 418 GDGFFYAKLIK 428 DGF+YAK+ K Sbjct: 411 FDGFYYAKIRK 421 >UniRef50_A6NUS8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUS8_9BACE Length = 447 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 132/445 (29%), Positives = 206/445 (46%), Gaps = 18/445 (4%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLD 59 + R A A+ QG L ++ + +D AL LCFGVL+ LD Sbjct: 3 STDQTARETALLALSACERQGAWSDGFLKKTLREAGLDSRDAALATRLCFGVLQNRLLLD 62 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAI-KRPQLKGL 117 + I K + V + +G+YQ+ + +IP +AA+ E+VE K P+ G+ Sbjct: 63 FYIGKFSTTRPEKMEIKVRNALRLGVYQMAFMTKIPHNAAVNESVELTKKHCKNPRAAGM 122 Query: 118 INGVLRQFQRQQEELL-----AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 +NGVLR R + L + RY HP WL++ E+ ++++EA+N + Sbjct: 123 VNGVLRNVSRNIDRLPVIESGSREEYLSIRYSHPLWLVREFTALLGSEEAEALLEADNGQ 182 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 PP+ +IN + + L L EAG++ PH D + L + L F +G +Q Sbjct: 183 PPITAQINTCRATMEQTLERLAEAGVEAQPHPWLADCLVLSGTGNLEHLTAFREGLFYIQ 242 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNL 290 D +A+ + P+ G +LD CAAPGGKT + E ++ + DI + + Sbjct: 243 DPAARLAVEVADPKPGMKVLDACAAPGGKTFASAIRMGGEGEIQSCDIHAHKEKLIQAGA 302 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 +RLG + E FD ++ D PCS G+IR+ PDI++ + + L Sbjct: 303 ERLGFNCIKTAVMDGKKHRPAFENAFDVVIADVPCSGLGIIRKKPDIRY-KDPEPLEGLP 361 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE----- 405 +QS ILD + ++K GG L+YATC++L EN ++ FL R D L + PE Sbjct: 362 AVQSAILDNVATYVKPGGVLLYATCTLLERENGDVVRGFLDRNKDFTLEKFQLPEPLGRA 421 Query: 406 -QPGKQNLPGAEEGDGFFYAKLIKK 429 P DGFF AKL + Sbjct: 422 DNGMFTFWPQRHGTDGFFIAKLRRN 446 >UniRef50_A4BK87 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BK87_9GAMM Length = 427 Score = 462 bits (1191), Expect = e-129, Method: Composition-based stats. Identities = 195/429 (45%), Positives = 273/429 (63%), Gaps = 8/429 (1%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 N R +AA+ + QVV++G+SL++ LP + + +A LQ+L +G R LD LIN Sbjct: 2 TNTRLIAAEILLQVVDEGRSLNDELPRRLKHIDPDQQAFLQQLVYGSTRYYFALDELINL 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 L+ +P+ GK+R VH L+ +GLYQL + + HAA+ ETVE + K+ K L+N LR+ Sbjct: 62 LVEKPIRGKERLVHMLLAIGLYQLWHLDVAEHAAINETVEATLTAKKQWAKNLVNASLRR 121 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 FQR++E +L + ++ P WL KRL++AYPEQ+ I +NQ PM LRINR + Sbjct: 122 FQRERETILPQLRRTE---SFPGWLNKRLRQAYPEQFADICVQSNQPGPMTLRINRRMMT 178 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 R++WL L + G+ P L +PAPV ALPGFEDG ++VQD +AQ C T L Sbjct: 179 REAWLLLAIKEGLVAHSTNHSPVGATLASPAPVLALPGFEDGALSVQDEAAQMCATLLPV 238 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 +G+ +LD C+APGGKT H+LE A + ++VA+DIDE RL RV +NL+R+G+ A + D Sbjct: 239 TDGQRVLDACSAPGGKTGHLLEKA-DIELVAIDIDEHRLGRVQENLERIGVSAELIAEDA 297 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 +W FD +LLDAPCS TGVIRRHPDIK LR+ DI L+Q+QS +LD +W + Sbjct: 298 AEIERWWDGVPFDAVLLDAPCSGTGVIRRHPDIKLLRKSADIKALSQVQSRLLDRLWGTV 357 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT----PEQPGKQNLPGAEEGDG 420 K GG L+YATCSVLP+EN+ +I AFLQ +A+ + G Q LP ++ DG Sbjct: 358 KPGGYLLYATCSVLPDENTDRIAAFLQAHPEAQEQPLALQADVDTEHGVQWLPQSDGHDG 417 Query: 421 FFYAKLIKK 429 F+YA L K+ Sbjct: 418 FYYALLKKQ 426 >UniRef50_A1TWM9 Sun protein n=3 Tax=Marinobacter RepID=A1TWM9_MARAV Length = 433 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 192/428 (44%), Positives = 260/428 (60%), Gaps = 9/428 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R++AA + V EQGQSLS LPP ++ + + LQ +C+G R +L+ +N+ Sbjct: 7 PFRAIAANVLLAV-EQGQSLSQCLPPALNQLPPEQRPQLQAICYGTCRWFHRLEGELNQR 65 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + +P+ R +H+L++V L+QL Y+ +A L ETVE A+ +P L GL+NGVLR Sbjct: 66 LKKPLRKPDRIIHHLMLVALFQLRYSEQATYAVLNETVEACRALDKPHLTGLVNGVLRAA 125 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 +R+ E R+ HP+W++++L+ +P WQ+I+EANNQ+ PM LR+N R Sbjct: 126 EREGA---PEPKDDSGRFSHPAWMVEKLRHNWPGYWQTILEANNQQAPMTLRVNALRFKR 182 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 D +L LL EAG++ P+ ++LE P PV LP FEDG +VQD +AQ C T L Q Sbjct: 183 DEYLKLLSEAGIEAHATRFAPNGIQLERPVPVDRLPWFEDGAASVQDEAAQLCTTLLDLQ 242 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEA-QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 G+ +LD CAAPGGKT ILE +VVA+D +RL RV +NL RL + AT+ Q D Sbjct: 243 PGQRVLDACAAPGGKTCAILEACGALDEVVAIDESAERLPRVQENLDRLDLHATLTQADA 302 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 W FDRILLD PCSATGVIRRHPDIK LRR+ DI LA +Q +L+A+W L Sbjct: 303 ADIDSWWDGTPFDRILLDVPCSATGVIRRHPDIKLLRRESDIVPLASIQLGLLEAMWSIL 362 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDG 420 K GG LVYATCSV P+EN I+ FL++ A L + G G+Q P + DG Sbjct: 363 KPGGRLVYATCSVFPQENHRIIQRFLKQQNQATLKCIEADWGRDMNTGRQLFPDPDSHDG 422 Query: 421 FFYAKLIK 428 FFYA L K Sbjct: 423 FFYAVLEK 430 >UniRef50_C4V0R0 rRNA SAM-dependent methyltransferase RmsB n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0R0_9FIRM Length = 449 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 130/442 (29%), Positives = 213/442 (48%), Gaps = 16/442 (3%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDW 60 K +R A Q + ++ +G + L + +++++D+ L EL +G ++ LD+ Sbjct: 9 KIDRIREQAMQVLLRIHSEGAYANVALAEELRIAQMTERDRRFLTELVYGTVKAGETLDY 68 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I + +A + Q + L+ +G YQ+ + +IP A VE A +N Sbjct: 69 MIRRYVA-DLKKAQPPIRELLRLGFYQIFFMDKIPSSAVCHTAVELAKKHGGKGAASFVN 127 Query: 120 GVLRQFQRQQEELLAE----FNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 GVLR R+ + + R HP W+++R + Y E+ +++ +N+ P+ Sbjct: 128 GVLRTALREPKRAALPQGHDARSLALRMQHPVWMVERWLRDYGSERTETLCRCDNESAPL 187 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 LR N SR + + L AG++ P++V L + AL +G VQD S Sbjct: 188 TLRTNTLRTSRTALIERLTAAGVRAEASLRVPESVLLHAHGALDALAPLREGLAQVQDES 247 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRL 293 + L + G ++D CAAPGGKTTHI + ++ A DI E++L R+ N +RL Sbjct: 248 SMLVAHVLGAEPGMTVIDACAAPGGKTTHIAQRMENRGRIWAFDIHEEKLRRIMRNAERL 307 Query: 294 GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 G+ Q DR+L+DAPCS GV+RR PD +W + D+ L LQ Sbjct: 308 GISIIETQLLDAREVGAHYGVCADRVLVDAPCSGLGVLRRKPDARWRKTPSDVKTLPPLQ 367 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT------PEQP 407 IL + +K GG LVY+TC++ EN+ ++AFL+ D L ETG + Sbjct: 368 LAILASAARTVKQGGVLVYSTCTMERSENTAVVEAFLRGHEDFVLEETGAFLPEQKTAER 427 Query: 408 GKQNLPGAEEGDGFFYAKLIKK 429 Q +P DGFF A++ ++ Sbjct: 428 MVQIMPETGGPDGFFIARMRRR 449 >UniRef50_D2RNU3 Sun protein n=3 Tax=Veillonellaceae RepID=D2RNU3_ACIFE Length = 446 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 127/445 (28%), Positives = 213/445 (47%), Gaps = 16/445 (3%) Query: 1 MK-KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQ 57 MK +N R A +EQ+ +G + L + +S D+ L EL +G ++T+ Sbjct: 1 MKGTAKNPREAALLILEQIFLRGAYANLALDQGLRGATLSPLDRKLTTELVYGTVKTMGT 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKG 116 LDW +++++ RP+ V ++ +G YQLLY RIP AA E+V+ A Sbjct: 61 LDWYLSRVVNRPLRKLDPLVLVILRLGAYQLLYLDRIPASAACNESVKLAKKWVHEGAGK 120 Query: 117 LINGVLRQFQRQQEELLAE------FNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANN 169 L+NG LRQ R +++ Y HP WL++R + Y E+ + +N Sbjct: 121 LVNGALRQLARTRDQWKFPQGPDHELERIALEYYHPEWLVRRWKFRYGLEEAVKLCAFDN 180 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 RP R+N +R+ L E G++ P PD + ++ + L + Sbjct: 181 ARPAFSFRVNTLRDTREGLQEKLAEKGIRTRPSQWSPDGLLCDSLPSLDDLVEGFGPDIY 240 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYD 288 +QD S+ L PQ GE +LDLC+APGGKTTH+ + + + +++A+D+ + +L V + Sbjct: 241 IQDESSMLDAAVLDPQPGERVLDLCSAPGGKTTHLAQKMQDQGEILALDLYDHKLDLVRE 300 Query: 289 NLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 N +RLG+ + E R+L+DAPCS GV+ R + +W + +R + + Sbjct: 301 NARRLGIHCIRTEKQDGTVFVPEWENTAHRVLVDAPCSGLGVLNRRAEARWTKEERSLSQ 360 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP- 407 LQ +IL ++ GG L+Y+TC++ +EN+ K FL+ + P Sbjct: 361 FPPLQKKILANGARYVMPGGRLLYSTCTLEQDENTRVRKWFLENHPEFAPAAFPHPLTGE 420 Query: 408 ---GKQNLPGAEEGDGFFYAKLIKK 429 Q LP + +GF+ K+ Sbjct: 421 PVEELQILPQRDGINGFYLCLFEKR 445 >UniRef50_B1YIQ1 Sun protein n=2 Tax=Exiguobacterium RepID=B1YIQ1_EXIS2 Length = 446 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 133/441 (30%), Positives = 213/441 (48%), Gaps = 20/441 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R A + ++ + G + + + + +S D L EL +G L LD+++ Sbjct: 2 NVRDAAVTTLLKIGQGGAFSTISVHQMLEKRAISKADVGLYTELVYGTLSRELTLDYILE 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + + L+ + +YQL Y RIP HA + E VE A +P + ++NGVL Sbjct: 62 PFLTKQ-KKLDPFMRPLLRMSVYQLFYLDRIPDHAVINEAVEIAKTRGKPHIAKVVNGVL 120 Query: 123 RQFQRQQEE----LLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLR 177 R R + + + + HP WL+KR + + E+ + NN+ P+ +R Sbjct: 121 RNVLRTGKPDFSAIPSTVDRISIETSHPVWLVKRWLELFGEEETWKMCRLNNEPAPVTVR 180 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 +NRT + + LL+E G+ P PD + + + V E G++++QD S+ Sbjct: 181 VNRTRTDQQEAIVLLEEQGVIAKPAHAAPDGLEIVSG-SVQQTDLLERGYLSLQDESSML 239 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 L Q +H+LD CAAPGGK HI E +VA+D+ ++ + RLG+ Sbjct: 240 VAAALGAQPTDHVLDSCAAPGGKAMHIAEGLATGSLVALDLHPHKVKLLEKQATRLGLHN 299 Query: 298 TVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 + D R FDRIL+DAPCS GVIRR PDIKW +R D+ +L +Q +I Sbjct: 300 VQAEALDARQAGTRFETASFDRILVDAPCSGLGVIRRKPDIKWTKRPEDLTQLPVIQRQI 359 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA---------ELCETGTPEQP 407 L+A+ P +K GT VY+TC++ P EN Q + L + E ++ E+ Sbjct: 360 LEAVLPLVKPDGTFVYSTCTMDPLENEQQTEFILSQGFVFDETFKTRMPEAVQSLIGERA 419 Query: 408 GKQNLPGAEEGDGFFYAKLIK 428 + LP + DGF+ A K Sbjct: 420 ELKLLPTSLGTDGFYIAAFKK 440 >UniRef50_B2IXU2 Sun protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IXU2_NOSP7 Length = 487 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 148/484 (30%), Positives = 222/484 (45%), Gaps = 63/484 (13%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLI 62 N R +A A+ V +G L + QK + D+D+ L+ EL +G +R LD LI Sbjct: 2 TNPRQLAFIALRDV-HKGAYADVALDRVLQKVNLPDRDRRLVTELVYGSVRRQRTLDTLI 60 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 ++ + + + ++ +G YQL Y RIP AA+ TV+ A L G +NG+ Sbjct: 61 DQFAKNKSHQQPQDLRTILHLGFYQLRYQERIPASAAVNTTVQLAKENGFSGLTGFVNGL 120 Query: 122 LRQFQR-------------------QQEELL-------------------------AEFN 137 LRQ+ R +++ LL Sbjct: 121 LRQYLRKAGEQGGRGAGGQRSRGAEEKDSLLVPVPQPPVPSTQAPVLNFDPLQLPENPVE 180 Query: 138 ASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAG 196 + P W+++ + + + + E NQ P + LRIN S + A L G Sbjct: 181 RLGILHSFPDWIIQVWLEQLGLTETEQLCEWMNQSPTIDLRINPLCTSIEEVEAALQSVG 240 Query: 197 MKGFPHADYPDAVRLETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCA 255 + D P A+R + LPGF++GW TVQDASAQ L PQ GE ++D+CA Sbjct: 241 LLVRRIPDLPQALRFMGNTGSIQKLPGFKEGWWTVQDASAQLVSHLLDPQPGEVVIDVCA 300 Query: 256 APGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGE 313 APGGKTTHI E+ + ++ A D RL ++ +N +RL + + GD R+ +Q + Sbjct: 301 APGGKTTHIAELMADSGKIWACDRTASRLRKLQENSQRLNLQSIQIYTGDSRHSNQ--FQ 358 Query: 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 373 DR+LLDAPCS G + RH D +W + + EL+ LQ E+L +K GG LVYA Sbjct: 359 NTADRVLLDAPCSGLGTMHRHADARWRQTPESVRELSVLQKELLTHTSTFVKAGGVLVYA 418 Query: 374 TCSVLPEENSLQIKAFLQRTADAELCETGTPE---------QPGKQNLPGAEEGDGFFYA 424 TC++ P EN I AFL + ++ E Q + P ++ DGF Sbjct: 419 TCTLHPAENEEVISAFLAESPHWQIEPPRGIELAASAYSTPQGWFKVWPHRQDMDGFLMV 478 Query: 425 KLIK 428 +L K Sbjct: 479 RLRK 482 >UniRef50_B3PGY5 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Gammaproteobacteria RepID=B3PGY5_CELJU Length = 432 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 195/429 (45%), Positives = 269/429 (62%), Gaps = 5/429 (1%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +R+ A Q + Q++ Q SLS++LP + K++++D+ LLQ+LCFGV R QL + Sbjct: 2 IPVRAAATQVLAQILRQQGSLSSLLPAMSVKIAEQDRPLLQQLCFGVCRYYPQLQAYTSL 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 L+ +P+ K V L+++GLYQL++TRIP HAA+ ETVE IK+ L+NGVLRQ Sbjct: 62 LLDKPLRAKDSDVQALLLLGLYQLIHTRIPDHAAIGETVEVTRDIKKAWATKLVNGVLRQ 121 Query: 125 FQRQQEELLAEFNASDARYL-HPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 FQR Q+ L + + A HP WL L+K++P+Q S++ ANN+ PP LR+N H Sbjct: 122 FQRDQQTLGEKLASDRAFSSNHPDWLEGMLRKSWPQQTDSLLAANNEHPPFTLRLNTRHM 181 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 SRD +LA L + P + L +LPGF G ++VQD +AQ L Sbjct: 182 SRDDYLAQLRALDIAAGATPFSPYGITLVQACDPRSLPGFAQGLISVQDEAAQLSGDLLQ 241 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 G +LD C APGGKT H+LE+ P +V A+D++E+RL RV DNL RLG+ A ++ GD Sbjct: 242 LAPGLRVLDACCAPGGKTGHLLEIEPRMKVTAMDVEERRLQRVRDNLGRLGVTADIRCGD 301 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 G P W + +DRILLDAPCSATG+IRRHPDIK LR +I LAQLQ ++LD++WP Sbjct: 302 GTRPEAWWDGEPYDRILLDAPCSATGIIRRHPDIKVLRTPEEIARLAQLQGQLLDSLWPL 361 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGD 419 LK GG L+YATCSV+P EN+ ++AF+QR +A G + G+Q LP E D Sbjct: 362 LKPGGILLYATCSVMPRENTRVVEAFIQRQPEARCDTLDVPWGLLQPCGRQLLPQPEGHD 421 Query: 420 GFFYAKLIK 428 GF+YA+L K Sbjct: 422 GFYYARLRK 430 >UniRef50_Q2JK83 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JK83_SYNJB Length = 457 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 148/459 (32%), Positives = 223/459 (48%), Gaps = 42/459 (9%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R +A A++++ Q +L L + D+ L+ EL +G+ R LD LI+ Sbjct: 2 NARQLALLALQKIERQNAYADLVLGHLLANSSLIPADRHLVSELVYGITRRRRTLDALID 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVL 122 L RP + + ++ +GLYQL + IP AA+ +VE A + L G++NG+L Sbjct: 62 CLAQRPAHKQPPDLRLILHLGLYQLAFLDQIPASAAIHTSVELARQMGLGSLTGVVNGIL 121 Query: 123 RQFQR------QQEEL--------LAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEA 167 R +QR +++ L A R+ P WL+ + + + + Sbjct: 122 RAYQRQVLDQPEKDPLKPLEDTLPADPIQALGIRHSFPDWLVSLWWERLGPVETEQLCAW 181 Query: 168 NNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL-ETPAPVHALPGFEDG 226 NQ P + LR+N + + L AG+ P ++ P A+RL + + ALPGF G Sbjct: 182 FNQPPHLDLRVNPLRADVNKVIQALAAAGIPALPISEVPGALRLQDHAGDITALPGFAQG 241 Query: 227 WVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSR 285 W +VQDASAQ + WL PQ GE ++D CAAPGGKTT I + + ++ A+D RL R Sbjct: 242 WWSVQDASAQQVVHWLDPQPGERVIDCCAAPGGKTTQIAQHMQDRGEIWALDRHPHRLRR 301 Query: 286 VYDNLKRLGMKATVKQG----------------DGRYPSQWCGEQQFDRILLDAPCSATG 329 + +N +RLG+ + + P+ Q DR+LLDAPCS G Sbjct: 302 LEENRQRLGLSSIRPLAIDLLSLSAAADRVSGTESLPPAPLPPWQSADRVLLDAPCSGLG 361 Query: 330 VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAF 389 + RH D +W + IPELA LQ+++L LK GG LVYATC++ P EN I+AF Sbjct: 362 TLHRHADARWRQTPERIPELAHLQAQLLQVAARWLKPGGVLVYATCTLHPAENEEIIQAF 421 Query: 390 LQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 L + E P ++ DGFF +L + Sbjct: 422 LDSHPNW------AAEGDPLLIWPHRQDRDGFFIQRLRR 454 >UniRef50_B8FHH2 Sun protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHH2_DESAA Length = 455 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 134/454 (29%), Positives = 223/454 (49%), Gaps = 25/454 (5%) Query: 1 MKK---QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRT 54 MK + R AA+ ++++ Q L +L K ++ KD+AL+ L +GVLR Sbjct: 1 MKPPAGKDKSRITAARILDRLESGDQVLDVVLDRALDKEPGLTRKDRALVMALVYGVLRN 60 Query: 55 LSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQ 113 ++DW+I+ + Q + ++ +G++QLL+ R+PP A+ +VE A Sbjct: 61 RGRIDWIISSFSKTKLKKIQPEILNILRMGVFQLLFLDRVPPALAVDSSVEMAKKAAPVF 120 Query: 114 LKGLINGVLRQFQRQQEEL------LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVE 166 + +NG+LR +R+ L A +P W++KR K + E+ + + Sbjct: 121 VSKFVNGLLRNVERKGRGLQLPDFAKDPLKAICVAESYPEWMVKRWIKRFGAEETLELCK 180 Query: 167 ANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP-APVHALPGFED 225 A N+ P+ +R+N +RD + + H P A+ P PV LPGF + Sbjct: 181 AGNRIAPITIRVNSLAATRDEAADEIRDQVKNLELHDWPPMALSFSAPLVPVFELPGFSE 240 Query: 226 GWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLS 284 G +VQDA++Q L P+ GE +LD CA G KT+HI ++ +++A D++ +L Sbjct: 241 GKFSVQDAASQMTALCLDPRPGEKVLDACAGLGSKTSHIAQLMENTGEILAADLEPGKLK 300 Query: 285 RVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 ++ + + RL + Q FD++L+DAPC+ GVIRR+PD KW + Sbjct: 301 KLEEEMARLKVSIVKTHALDFTRELSLEPQGFDKVLVDAPCTGLGVIRRNPDSKWSKTLN 360 Query: 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP 404 I + A+LQ IL ++ GG ++Y+ CS+ PEE IKAFL+ D L + P Sbjct: 361 SIHKHAKLQGMILSRAAELVRPGGLILYSVCSMEPEETDGVIKAFLRNNEDFTLEPSPLP 420 Query: 405 ---------EQPGKQNLPGAEEGDGFFYAKLIKK 429 EQ + P + DGFF A++ ++ Sbjct: 421 KDGDQTMLDEQGCMRTFPHRQGMDGFFAARMRRR 454 >UniRef50_B4WR53 Ribosomal RNA small subunit methyltransferase B n=4 Tax=Cyanobacteria RepID=B4WR53_9SYNE Length = 491 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 145/458 (31%), Positives = 222/458 (48%), Gaps = 35/458 (7%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ----------KVSDKDKALLQELCFGVL 52 K + R +A +A+ + +QG ++ + ++S +DK L+ EL +G + Sbjct: 34 KPKTARQIAFEALRAI-DQGAFADVVIDRKLKGTQTGTQLGIQLSSQDKGLVTELVYGSV 92 Query: 53 RTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKR 111 R LD LI++ RP + + R + ++ +G YQL Y +P HA + TV+ A + + Sbjct: 93 RRRRTLDALIDQFGKRPASKQHRDLLQILRLGFYQLRYLDHVPVHAVVDTTVQLAKSQRL 152 Query: 112 PQLKGLINGVLRQFQRQQEELL-----------AEFNASDARYLHPSWLLKRLQKAYPEQ 160 +L G++N +LRQ+ R+ + +P W++ + P+ Sbjct: 153 GKLSGVVNAMLRQYAREAMPAANVIADPLKLPEERTRRLGILHSYPDWIIDVWRSMLPDD 212 Query: 161 -WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE-TPAPVH 218 +++ E N+ P + LRIN S + +AL +AG++ P P A+RL V Sbjct: 213 QVEALCEYFNRSPYLELRINLQRQSLSAAIALFADAGIEALPIEGVPSALRLTTHAGAVT 272 Query: 219 ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVD 277 LPG+ +GW VQD+SAQ L PQ GE I+D CAAPGGK+ HI E+ E V + D Sbjct: 273 QLPGYAEGWWAVQDSSAQLVSYLLDPQPGEVIIDACAAPGGKSLHIAELMRNEGTVWSCD 332 Query: 278 IDEQRLSRVYDNLKRLGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPD 336 R ++ N+ RLG GD R + G+ DR+LLD PCS G + RH D Sbjct: 333 RTSSRTKKIQQNIDRLGATIVRPIMGDSRNQPTFLGQG--DRVLLDVPCSGLGTLNRHAD 390 Query: 337 IKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA 396 +W + + L LQ EIL +K GG LVYATC++ P+EN QIK FL + A Sbjct: 391 ARWRQTPDSVDSLVTLQQEILMHASTWVKPGGVLVYATCTLHPQENEAQIKTFLSQNAGW 450 Query: 397 ELCET------GTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + E + P + DGFF KL + Sbjct: 451 TIEAPPPSFGIEPTEAGWIKVWPHIQHMDGFFIVKLRR 488 >UniRef50_Q603G1 Sun protein n=1 Tax=Methylococcus capsulatus RepID=Q603G1_METCA Length = 431 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 190/428 (44%), Positives = 260/428 (60%), Gaps = 11/428 (2%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R++AA A+ VV SL+ L + +D+A +Q LC+GVLR LD+L+ +L Sbjct: 6 RTLAAAALHDVVVDRHSLTWALGKRLPSLPDARDRAFVQSLCYGVLRAFETLDFLLGRLA 65 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P+ + L ++GL+QL + PHAA++ETVE A + K L+N +LR + Sbjct: 66 TKPIR--DPEIRLLALIGLHQLRSMNVKPHAAVSETVEAAGR--KSWAKPLLNAILRNYL 121 Query: 127 RQQEELLAE-FNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R++EEL + ++R HP+WL RL +PEQW+++V+ NN PPM LR+N + R Sbjct: 122 RRKEELESRALQDPESRDAHPAWLRDRLAADWPEQWETLVQQNNLPPPMTLRVNPLMNDR 181 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 +LA L EAG+ P P + L +P PV ALPGF +G V+VQD +AQ + + Sbjct: 182 AGYLARLTEAGIAARPCRHSPWGLTLGSPVPVDALPGFAEGRVSVQDEAAQLAAPLVGAE 241 Query: 246 NGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 GE +LDLCAAPGGKT H+LE++ + + VAVD D +R +R+ +NL+R + A V GD Sbjct: 242 PGERVLDLCAAPGGKTLHMLELSRGDIEAVAVDSDAERCARIRENLERERLSAAVVTGDA 301 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R P W + FDRILLDAPCSATGVIRRHPDIK LR+ D+ L +LQ+ IL A WP L Sbjct: 302 RSPESWWDGRPFDRILLDAPCSATGVIRRHPDIKLLRQAVDLDTLNELQAAILTAAWPLL 361 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE----TGTPEQPGKQNLPGAEEGDG 420 K GG LVYATCSV+ EN Q+ FL+ DA G P + G+Q L G DG Sbjct: 362 KPGGILVYATCSVIRAENEAQMSRFLEAHDDAAELPLPAAWGIPLRHGRQILTGESGMDG 421 Query: 421 FFYAKLIK 428 F+YA L K Sbjct: 422 FYYALLRK 429 >UniRef50_D1RHX8 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Legionella longbeachae D-4968 RepID=D1RHX8_LEGLO Length = 458 Score = 456 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 191/433 (44%), Positives = 255/433 (58%), Gaps = 13/433 (3%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 +K+ N R A + ++ + LS ++ +VS K E+CFG R +L + Sbjct: 30 RKKPNERLHALYILTHLLVEKTPLSQLM-ASSAEVSPMTK----EICFGFCRHYFRLQAI 84 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 N L+ + + V +++G+YQL Y ++P +A + ETV IK+ KGL+N V Sbjct: 85 ANCLIHKKPKEIELWV--ALLIGIYQLHYMKLPDYAVVKETVALLEKIKKGWAKGLVNAV 142 Query: 122 LRQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 LR F RQ +E+L N Y HP WLL+RLQK +P WQ+I +AN PPM LR+N Sbjct: 143 LRNFCRQHDEILTRLNKDPLFLYGHPQWLLRRLQKDWPNNWQAITKANEAHPPMTLRVNL 202 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 S +L +L +A + PH+ +A+ LETP VH LPGF G V+VQD +AQ + Sbjct: 203 RKISVMEYLNVLKQANITATPHSIAAEAIVLETPCDVHQLPGFAQGLVSVQDGAAQLATS 262 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L+ + G +LD C APGGKT HILE P A+ VAVDID +RL RV +NL RL + AT+ Sbjct: 263 LLSLKPGLRVLDACCAPGGKTCHILEKEPHLAECVAVDIDSKRLDRVRENLNRLHLHATL 322 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 QGD PSQW + FDRILLDAPCSATGVIRRH DIK LR D +I + ++Q +L + Sbjct: 323 LQGDASNPSQWWDGKLFDRILLDAPCSATGVIRRHSDIKLLRNDEEIATITKIQHTMLSS 382 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGA 415 +WP L GG LVYATCSV+ EN QI F++ D L G + G+Q LPG Sbjct: 383 LWPLLTKGGLLVYATCSVMLAENEQQIANFIKNNPDCNLITKSWPWGHTTKYGQQILPGE 442 Query: 416 EEGDGFFYAKLIK 428 + DGFFYA L K Sbjct: 443 QCMDGFFYAVLFK 455 >UniRef50_B2A2K5 Sun protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2K5_NATTJ Length = 462 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 134/459 (29%), Positives = 231/459 (50%), Gaps = 32/459 (6%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQL 58 MK ++ R +A A ++++ + +L L K + +DKAL + +G L+ + Sbjct: 1 MK-IKSSRELAFVAYTRIIQDQAYSNLVLNQLLGKTDLLAQDKALASRITYGTLQWQGLI 59 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 D+ + L RP++ +L+ +G YQ+L+ R+PP A++ ETV+ A + Sbjct: 60 DYYLKTLSHRPLSKLSNKALFLLRMGAYQILFLDRVPPSASVNETVKVAHRRTHKGIANF 119 Query: 118 INGVLRQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +NG+LR R+++++L +Y HP W++K Y ++ SI++ NN Sbjct: 120 VNGILRNLIRKKDQILLPSRDQDLLNYLSVKYSHPYWMVKLWYDKYGLDKTISIMDQNNS 179 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P +R+N+ S ++ L+ G++ + DA+ ++ ++ F G+ V Sbjct: 180 TPEEAIRVNKLLTSLENLKNELEMTGIQSRLSSKIDDALLVDNLGDLNNNTLFNCGYFQV 239 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 QD ++ PQ G++I+DLC+APG KTTH++++ + ++AVDI E RL V + Sbjct: 240 QDINSMVVSHLCDPQQGDNIIDLCSAPGSKTTHLVQLIDGQGSILAVDIHEHRLKLVKEA 299 Query: 290 LKRLGMKAT-VKQGDGRYP-------SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR 341 +RL + VKQ DG + + QFD L+DAPCS G +R+ P++KW Sbjct: 300 CRRLQVNNVNVKQADGTKLISRDQQENNKQLKGQFDLCLIDAPCSGLGTLRKRPELKWTI 359 Query: 342 RDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET 401 ++D+ L+ LQ ++L A +K GGTLVY+TC++ P+EN QI FL+ D + Sbjct: 360 SEQDLNSLSTLQGKLLKAGSQLVKPGGTLVYSTCTINPQENEDQINDFLKNHPDFVMESP 419 Query: 402 G------------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 Q P GDGF+ A++ K Sbjct: 420 RAILKEDTLQGGMILSNNSLQYFPELNLGDGFYGARMKK 458 >UniRef50_C9LLK5 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK5_9FIRM Length = 454 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 125/443 (28%), Positives = 211/443 (47%), Gaps = 16/443 (3%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLD 59 +K ++ R++A +A+ ++ E+ + + + + + +++ LL EL +GV R + Sbjct: 7 EKIKSARTLAFEALYEIFEKNAYANLTIQSILRWCPLKKEERHLLTELIYGVCRKYNYCL 66 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 W+I+ + RPM V L+ +G+YQ+++ RIP AA+ ETV+ A + I Sbjct: 67 WMISLISDRPMFKIHPAVRILLALGIYQIVFLDRIPESAAVNETVKIAKKVTHIGNVKFI 126 Query: 119 NGVLRQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 NGVLR F R++ L Y P WL++ +K Y Q + I++A N Sbjct: 127 NGVLRNFLRRRGSLTLPDRTSNRVFYESLIYNQPEWLIRFFEKEYGMGQSEKILKAFNTI 186 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 +R+N D L + + P+A+ ++ + + G + +Q Sbjct: 187 SDTCIRVNTLKIETDDIKKQLKLRNISVGDISYMPEALAIKAGTDILFSEFLQTGLIYIQ 246 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNL 290 AS+ L P G+H+LD+CAAPG KTTHI + + A D+ ++ + DN Sbjct: 247 TASSMIPAKVLGPDAGDHVLDMCAAPGSKTTHIAALMGNRGSIDAWDVYPHKVKLIKDNA 306 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 KRLG+ + + +D++LLDAPCS GV+ +++W R++ D+ Sbjct: 307 KRLGISIIHTEVRDSVKPLPFLYETYDKVLLDAPCSGLGVLGHKVELRWRRKESDLSVFP 366 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-----E 405 LQ ++++ + KTGG LVY+TC++ P+EN I FL ++ E P Sbjct: 367 PLQKQLIEQAAKYTKTGGVLVYSTCTLNPDENEHIINEFLSLHSEFAPEEFNFPVLGKSL 426 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 P DGFF AKL K Sbjct: 427 NGMMTLYPDLVRSDGFFVAKLRK 449 >UniRef50_B3WEW8 RRNA methylase (Putative) n=77 Tax=Bacilli RepID=B3WEW8_LACCB Length = 446 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 127/449 (28%), Positives = 200/449 (44%), Gaps = 24/449 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQL 58 M N R +A + + +V QG + L + K++ +D LL + +GV++ L Sbjct: 1 MTPN-NPRLLAVETLSRVTGQGGYSNLTLDHVINSHKLTPRDAGLLTNIVYGVIQHQLTL 59 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 D+ + + + L+ + +YQL Y ++P A ++ E A + + Sbjct: 60 DFYLAPFIKG--RKLDNWIRCLLDIAVYQLQYLDKVPARAVFFDSTEIAKKLGHQGIAKF 117 Query: 118 INGVLRQFQR----QQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRP 172 + GVLR QR + P WL+++L E + ++I+ N Sbjct: 118 VTGVLRNAQRTGFPDPAAIADPVKRLSIESSTPVWLVEKLTAQLGEPKTRAILNVINVPA 177 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 LR+N T + + LA L P + + + F G T+QD Sbjct: 178 HASLRVNTTKITPAALLASLKPEFPDLKESPLTPIGLIAPSGH-LAGTSAFVKGEYTMQD 236 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP---EAQVVAVDIDEQRLSRVYDN 289 S+ L Q G+ +LD CAAPGGKTTHI + QV A+D+ ++ + N Sbjct: 237 ESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHANKVRLINKN 296 Query: 290 LKRLGMKATVK--QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 KRLG+ + D R + FD+IL+DAPCS G+IRR P+IK+ + D Sbjct: 297 AKRLGLTDRIHAQVLDARKVATTFPANSFDKILVDAPCSGLGLIRRKPEIKYTKTPEDPA 356 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT---- 403 L Q+Q IL+++ P LK GG L Y+TC+++ EEN + FL + E T Sbjct: 357 HLQQIQLAILNSVAPTLKIGGRLTYSTCTMVKEENQDVVAQFLAAHPEFEQVSVPTLKPL 416 Query: 404 ---PEQPGKQNLPGAEEGDGFFYAKLIKK 429 P Q P + DGFF A LI++ Sbjct: 417 HKAHNAPALQLFPDDYDTDGFFIASLIRR 445 >UniRef50_A1WZH2 Sun protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZH2_HALHL Length = 429 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 175/428 (40%), Positives = 239/428 (55%), Gaps = 6/428 (1%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 R A +E+V+E+G++L L +VS+++++LLQ L +G LR L++L+ + Sbjct: 2 STPPRVAAVHVLERVLERGETLDEALEAQFSRVSERNRSLLQALVYGALRWLTRLEAQVA 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L R + L+++G ++ P HAA++E V+ A ++R + G++N VLR Sbjct: 62 TLTPRDDWRADPLLRGLLVIGAWEAQGLATPAHAAVSEAVDAARRLRRARAAGMVNAVLR 121 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 + + A ARY P WLL L++A+PE W ++ EA N PPM LR +R Sbjct: 122 KLHKATPPGPA---DEAARYALPPWLLDHLRRAWPEDWPAVAEAGNAHPPMTLRFDRNRI 178 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 SR++ L L E + P P A L P PV LPGF +GW++VQD +AQ L Sbjct: 179 SREACLQSLAEQEIPAHPGEVAPSAATLHAPVPVARLPGFAEGWLSVQDEAAQLAAPLLD 238 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 PQ G+ +LD CAAPGGKT H+LE P A V A+D +RL +V DNL R G +A D Sbjct: 239 PQPGDRVLDACAAPGGKTLHLLEHTPTAAVTALDRSSRRLRQVRDNLARGGYEAQCLAAD 298 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 P W + F RILLDAPC+ +GVIRRHPDIKWLR D +A Q +L A+W Sbjct: 299 AADPEAWWDGEPFQRILLDAPCTGSGVIRRHPDIKWLRGVDDPARMAAAQRHLLAALWRV 358 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE---LCETGTPEQPGKQNLPGAEEGDG 420 L GG L+YATCS+ PEEN + FL ADA+ L G G Q LPG DG Sbjct: 359 LAPGGRLLYATCSIFPEENEQVVAGFLAEHADAKPGPLAPVGRCTGSGCQILPGEHGMDG 418 Query: 421 FFYAKLIK 428 FFYA L + Sbjct: 419 FFYACLER 426 >UniRef50_Q3A7Z0 Sun protein n=2 Tax=Desulfuromonadales RepID=Q3A7Z0_PELCD Length = 451 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 141/449 (31%), Positives = 217/449 (48%), Gaps = 26/449 (5%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQLDWL 61 ++ R +A +++V G L Q + D +D+AL EL +GVLR +LD+ Sbjct: 4 QDPRHIAFDILDKV-HNGAFADLALDSALQALPDMDVRDRALATELVYGVLRYRGRLDFA 62 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLL-YTRIPPHAALAETVEGAIAIKRPQLKGLING 120 + +L +P+ + V L+ +G YQ+L RIP HAA+ ETVE A +K + G ING Sbjct: 63 LQQLCRKPLAKVEPAVLNLLRLGCYQILQLDRIPNHAAVFETVELARRLKLQRATGFING 122 Query: 121 VLRQFQRQQEELL------AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 +LR RQ +L + + P WL R + E+ ++ +A + P Sbjct: 123 ILRGLVRQAAQLPWPDRQRDPLDYLEHVLSLPRWLAARWLDEFGAEEACALAQAMLKPAP 182 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 +R N R++ LA L+ + P P+ + + L G +G +QD Sbjct: 183 YAIRTNTLKIQREALLATLNASDCDAVPTRFVPEGIYIRQGET-RHLSGHTEGIFQLQDQ 241 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKR 292 ++ L PQ GE ILD CAAPGGKTTH+ + A++VA+D+ QR+ + R Sbjct: 242 ASMLISHLLNPQPGERILDACAAPGGKTTHMAALTDNRARIVALDLHPQRVDLITRGANR 301 Query: 293 LGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG + D + FDRIL+DAPCS GV+RR+P+I+W R+ D+ E+A+ Sbjct: 302 LGCQGIEGHAWDLTGVPDFLEPASFDRILVDAPCSGLGVLRRNPEIRWRRKPADLKEMAR 361 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG--------- 402 +Q IL + P L+ GG LVY+ C+ PEE I+AF + C+ Sbjct: 362 IQRAILGNVAPLLRPGGRLVYSLCTFSPEETQNVIRAFTNEHPEFTRCDLRNETPAAWHA 421 Query: 403 -TPEQPGKQNLP-GAEEGDGFFYAKLIKK 429 Q + LP ++ D FF K+ Sbjct: 422 LFDRQGALRTLPQHHDDMDAFFAVAFEKQ 450 >UniRef50_B5JST2 Ribosomal RNA small subunit methyltransferase B n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JST2_9GAMM Length = 431 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 188/432 (43%), Positives = 254/432 (58%), Gaps = 11/432 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R A +A+ V +QGQSLS LP L + +D+ L QEL +G LR + +WL +L Sbjct: 2 NARQQALRAITSV-QQGQSLSAALPDLLAPLPKRDRGLCQELSYGSLRYYHRYEWLSQQL 60 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + +P K + ++ +GLYQL RIP HAA++ TV +K+ KG+IN VLR Sbjct: 61 LKKPFKHKDSDLQAVLALGLYQLFEMRIPDHAAVSNTVALVNGLKKSWAKGVINAVLRNA 120 Query: 126 QRQQEELLAEF-NASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 RQ++E + + A++ P WLL L+ +P+QW I EA+ +PPM LRI + + Sbjct: 121 LRQRDEWRGKIADEEAAQHSLPRWLLNFLEGNWPDQWTGIAEASLAKPPMTLRI--SGGA 178 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD + L ++ A+ + P LPGF G +VQDA+AQ L P Sbjct: 179 RDQYRQRLSALDIECHAPERADWALTITPPVDTDVLPGFAKGEASVQDAAAQWAAPLLNP 238 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 Q GE +LD CAAPGGKT H+LE A +VA+D++ +RL+RV NL RLG A + D Sbjct: 239 QAGERVLDACAAPGGKTGHMLEWASALDLVALDLEPKRLARVEQNLTRLGRSAELLSADL 298 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R ++W Q FDRILLDAPCSA+GVIRRHPDIK LR+ DI L +LQ++ LDA W L Sbjct: 299 RDTARWWNGQAFDRILLDAPCSASGVIRRHPDIKLLRQPEDINALVELQAQCLDAAWSTL 358 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE------TGTPEQPGKQNLP-GAEE 417 K GGTL+YATCS+ EN Q++ FL+R +DA L G G+Q P G Sbjct: 359 KEGGTLLYATCSLFKAENQHQVREFLERHSDAALDAFSETALPGIDTGYGQQFFPGGPFN 418 Query: 418 GDGFFYAKLIKK 429 GDGFFYA+L K+ Sbjct: 419 GDGFFYARLRKR 430 >UniRef50_B8CWT0 Sun protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWT0_HALOH Length = 440 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 119/441 (26%), Positives = 212/441 (48%), Gaps = 32/441 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLDWLINKLM 66 R +A + + ++ ++G + +L KVSD +D+A + EL +GVLR +LD++++ Sbjct: 5 RKVAIKVLIEI-DKGAYSNLVLNKELNKVSDKRDRAFITELVYGVLRQKKRLDYMLSCFS 63 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 RP+ V + V LYQ+ YT +P AA+ ETVE + NGVLR + Sbjct: 64 KRPLRKMDNEVLSALRVALYQIEYTDSVPARAAVYETVEALKSFTGHGAVKFTNGVLRSY 123 Query: 126 QRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRI 178 R +++++ Y +P W++K Y + + + + N PP+ +R Sbjct: 124 LRNKDKIIFPDRNQNPVNFLANYYSYPEWIIKEWINKYGFKDTERLCQYLNDSPPVTVRY 183 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 NR + +L + + ++ PD + + LP F+DG VQ +A Sbjct: 184 NRLQVDQKRFLEVFKKYNIEVESTT-VPDCYVVNNFNTIKDLPLFKDGGFIVQGPAATLA 242 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKA 297 L P G +LD+ A PGGKTTH+ E+ +++A+DI E +L + +N RLG+ Sbjct: 243 GFVLGPDPGNRVLDMSAGPGGKTTHLAELMNNRGEIIALDIYEHKLKLIEENCNRLGVNI 302 Query: 298 T-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 + DGR + +++FD +L+DAPC+ G++ P+IKW R + D+ +L ++Q + Sbjct: 303 VKTIKVDGRDYTS---QEKFDMVLVDAPCTGLGLVAHKPEIKWNRTENDVKKLQEIQKSL 359 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-------------- 402 L ++ GG ++Y+TC++ EN + LQ+T D + Sbjct: 360 LHNALSLVRDGGFVLYSTCTLTRAENEEVVNQVLQQT-DFVVSPVNMEKRLSEIGFSGKF 418 Query: 403 -TPEQPGKQNLPGAEEGDGFF 422 + + P + +GF+ Sbjct: 419 KITPEGYLEFFPPESKTEGFY 439 >UniRef50_A0LEK0 Sun protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEK0_SYNFM Length = 449 Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 144/446 (32%), Positives = 213/446 (47%), Gaps = 22/446 (4%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQ---QKVSDKDKALLQELCFGVLRTLSQLDWL 61 N R +A Q + + ++ + +++ ++D+ALL EL +GVLR +LDW Sbjct: 2 INARVLAFQILLHMDRDASHPDRLIRGMLGRHERLEERDRALLTELVYGVLRWQGRLDWH 61 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLL-YTRIPPHAALAETVEGAIAIKRPQLKGLING 120 I++L V L+ + LYQ+L RIP HAA+ E V A + L +NG Sbjct: 62 IDQLSRTRPEKIDPAVRILLRLALYQILMLDRIPDHAAVNEAVNMAKTTQPAYLVKFVNG 121 Query: 121 VLRQFQRQQEELL------AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 VLR+ R++ + HP W ++RL + E+ I ANN P Sbjct: 122 VLREALRRRSRWIWPEAGEEPGKYIAVTTAHPIWYVERLLHEFGFEETLDICNANNTVAP 181 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQD 232 M LR+N S D+ L E G+ P P AVRL + + DG V VQD Sbjct: 182 MTLRVNALKTSIDTILQWCAEHGIDAEPSGVVPTAVRLSGLRRDLAETSIYRDGLVQVQD 241 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLK 291 ++Q T +AP+ GE +LDLCA GGK+TH+ + +VVAVD +L + N + Sbjct: 242 EASQIVSTLVAPRAGERVLDLCAGFGGKSTHLGILMGDRGEVVAVDNSAWKLEELRKNAR 301 Query: 292 RLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 R G++ + + E FDR+LLDAPCS G +RR+PDIKW R +D + Sbjct: 302 RQGLRIIKPRTADLFEFSPGTEDLFDRVLLDAPCSGFGTLRRNPDIKWRRHLKDPRRFGR 361 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------- 404 +Q E+LD +K GG LVY+ C++ EEN + F D ++ G Sbjct: 362 IQKEMLDHAARFVKPGGALVYSACTLFQEENDAVAEHFAASHPDWQIEPVGPDLPDACRG 421 Query: 405 --EQPGKQNLPGAEEGDGFFYAKLIK 428 P + P + DGFF A+L + Sbjct: 422 MASGPFFRTWPHRHQVDGFFAARLKR 447 >UniRef50_Q88B41 Ribosomal RNA small subunit methyltransferase B n=23 Tax=Gammaproteobacteria RepID=RSMB_PSESM Length = 448 Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 208/434 (47%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R AA+A+ V+ SL++ LP KV +D+ L Q+L FG R +L L KL Sbjct: 2 NPRLAAAKALAAVLSGKASLNSSLPTQLDKVELRDRGLTQDLAFGTARWQPRLSALAAKL 61 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + +P V L++VGLYQL Y+RIP HAA+ ETV A +K+P KGL+N VLR Sbjct: 62 LQKPFKAADADVEALLLVGLYQLFYSRIPAHAAIGETVGCADKLKKPWAKGLLNAVLRNA 121 Query: 126 QRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 QR E LL E R HP WL K L+ A+PEQW++I ANN PPM LR+NR H Sbjct: 122 QRDGEALLIELEHDPVVRTAHPRWLQKALKAAWPEQWEAICAANNAHPPMILRVNRRHQR 181 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD +L LL AG++ D + L P V +LPGF +GW++VQD +AQ L Sbjct: 182 RDQYLELLKTAGLEASACTFSQDGIVLAEPCDVRSLPGFAEGWISVQDEAAQLAADLLEL 241 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 G+ +LD C APGGKT H+LEV P+ + VVAVD++ +RL RV +NL+RLG+ A + D Sbjct: 242 APGQRVLDACCAPGGKTCHLLEVQPQLSGVVAVDLEAKRLVRVRENLERLGLDAELIAAD 301 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 R +QW + F RILLDAPCSATGVIRRHPDIK R+ DI LA LQ E+LDA+WP Sbjct: 302 ARETAQWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQLDDIAALATLQGELLDALWPT 361 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET---------GTPEQPGKQNLPG 414 L+ GG LVYATCS LP EN+ I+AFL RT+ A + G + G+Q L Sbjct: 362 LQVGGMLVYATCSTLPTENTDVIEAFLARTSGARELDIAGQAGQPPAGIKQPHGRQLLAQ 421 Query: 415 AEEGDGFFYAKLIK 428 DGF+YAKLIK Sbjct: 422 QGGHDGFYYAKLIK 435 >UniRef50_Q5ZSC6 rRNA methyltransferase (SUN protein) n=5 Tax=Gammaproteobacteria RepID=Q5ZSC6_LEGPH Length = 427 Score = 449 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 186/434 (42%), Positives = 260/434 (59%), Gaps = 16/434 (3%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK N R A + + ++E ++LS ++ P Q++S K E+C+G R +L Sbjct: 1 MK--VNDRFNALKILTALIESRKNLSYLMSP--QEISPMTK----EICYGFCRHYFRLQS 52 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 + + L+ + + ++++G+YQL Y P +A + ETV +K+ KGL+N Sbjct: 53 IADTLINKRPK--DNELWIVLLIGIYQLQYMNKPDYAVVKETVSLLGQVKKSWAKGLVNA 110 Query: 121 VLRQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRIN 179 VLR F R+++ +L + A Y P+WLL+RLQK +P WQ I AN++ PPM LR+N Sbjct: 111 VLRNFCRRKDHILEKLAAEPVFIYGQPNWLLQRLQKDWPNDWQFIAAANDRHPPMTLRVN 170 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 HS D +L LL ++G++ F H PD + L P V LPGF G V+VQDA+ Q Sbjct: 171 VLKHSVDEYLDLLKKSGIEAFKHPVAPDGITLAIPCDVMTLPGFAQGSVSVQDAAPQLAA 230 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L+ + G+ +LD C APGGKT HILE P A VA+D+D QRL RV DNL RL ++AT Sbjct: 231 YLLSLKPGQRVLDACCAPGGKTCHILEKEPGLASCVALDLDPQRLQRVRDNLNRLDLQAT 290 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 V QGD P W FDRILLDAPCSATGVIRRH DIK LR D +I ++Q+QS +L+ Sbjct: 291 VVQGDVLEPRSWWDGHPFDRILLDAPCSATGVIRRHSDIKLLRTDEEISAISQVQSSMLN 350 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE----TGTPEQPGKQNLPG 414 ++WP L GG +VYATCS++ +EN LQI F+ +D ++ + G G+Q LPG Sbjct: 351 SLWPLLAPGGLMVYATCSIMSDENELQIAQFVAEHSDCQVSDGKWSWGRWTGHGQQILPG 410 Query: 415 AEEGDGFFYAKLIK 428 DGFFY+ L K Sbjct: 411 EHSMDGFFYSVLRK 424 >UniRef50_D0BMY2 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Granulicatella RepID=D0BMY2_9LACT Length = 441 Score = 449 bits (1156), Expect = e-125, Method: Composition-based stats. Identities = 129/439 (29%), Positives = 213/439 (48%), Gaps = 18/439 (4%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +R+ + QV + + L + QQK + KDK LL EL +G ++ +D+ + Sbjct: 4 VRNAVVDLLVQVEQDQSYSTISLKKVIEQQKWTAKDKGLLTELFYGTIQRKMTIDFYLAP 63 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + Q V L+ + +YQ+++ +IP HAA+ E V+ A + +NGVLR Sbjct: 64 YIQK-AKKIQPWVKQLLRISIYQMVFLDKIPDHAAIFEAVQIAKKRGHQGIAKFVNGVLR 122 Query: 124 QFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRI 178 FQR EE+ +Y P W+ + ++ Y EQ Q I E+ P + +RI Sbjct: 123 NFQRNDLRSFEEIKDTDERMSVQYSIPKWMYQLFKQQYGVEQAQQISESILTAPSVSVRI 182 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 H +++ LL E G++ + +E V FE G +T+QD ++ Sbjct: 183 QPNHLNQEQVKQLLLEEGVQTRESTLSNRCLIVEEG-NVFLSKTFEKGIITIQDEASSLV 241 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVA---PEAQVVAVDIDEQRLSRVYDNLKRLGM 295 + +LD CAAPGGKTTHI +V A+D+ E +L ++ +N KRL + Sbjct: 242 AQVANLKPTNKVLDTCAAPGGKTTHIASYLDPSKGGRVDALDLYEHKLKKIQENAKRLQV 301 Query: 296 KATV--KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + + D R + + FD + +DAPCS G++RR PDIK+ + +D+ L ++Q Sbjct: 302 DDCISMRILDARNAQEAYPTESFDAVFVDAPCSGLGLVRRKPDIKYTKSLKDLKSLEKIQ 361 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG---TPEQPGKQ 410 +IL + +K+ G+LVY+TC++ EN + FL+ E+ G + Sbjct: 362 LDILLSASKMVKSKGSLVYSTCTINKAENRELVNQFLEENPAFEIEPIGKWIHKDTEDIT 421 Query: 411 NLPGAEEGDGFFYAKLIKK 429 LP DGF+ KL+KK Sbjct: 422 ILPNDFNSDGFYICKLVKK 440 >UniRef50_C0N5F9 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5F9_9GAMM Length = 406 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 175/406 (43%), Positives = 238/406 (58%), Gaps = 5/406 (1%) Query: 29 LPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQL 88 + +++D +++ Q+LC+GVLR L +L N+L+ +P K + L + GLYQL Sbjct: 1 MAAFLPQLNDNERSFYQQLCYGVLRLHPTLIFLGNQLLKKPFKNKDADIAALFLTGLYQL 60 Query: 89 LYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDAR-YLHPS 147 R P HAA++ETV A + + GL+N LR +QRQ EL A+ + HP Sbjct: 61 RDLRTPSHAAISETVNAAKKLGKQWATGLLNACLRNYQRQHTELEAQLQHNPVAGTAHPE 120 Query: 148 WLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD 207 WLL++ Q +P+ WQ I +ANNQ+ PM LR+NR SR+++L L + + D D Sbjct: 121 WLLQQYQSDWPDHWQQITQANNQQAPMMLRVNRQQASRETYLQQLLQQDIGATALRDCDD 180 Query: 208 AVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV 267 V L V+ALP FE G +VQD +AQ + L Q +HILD CAAPGGK+ HILE Sbjct: 181 GVLLSKAYDVNALPNFETGMASVQDGAAQLVVKMLDIQPDQHILDACAAPGGKSCHILEQ 240 Query: 268 APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSA 327 P+ +VA+DI +RL ++ NL RL + A +K D W + FDRIL+DAPCS Sbjct: 241 HPDNTLVALDISAERLKQIEQNLSRLQLGAQLKAADASDTDAWWDGELFDRILIDAPCSG 300 Query: 328 TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 +GVIRRHPDIK LRR DI LA Q ++LD +WP LK G +VY TCS +EN QI+ Sbjct: 301 SGVIRRHPDIKLLRRPEDITSLAHTQQQLLDKLWPLLKADGLMVYTTCSAFKKENEQQIE 360 Query: 388 AFLQRTADAELCE----TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 AFLQR DA+ T G Q LPG + DGF+YA L ++ Sbjct: 361 AFLQRHPDAKELRFEQAPATARPYGYQRLPGDDVMDGFYYACLRRR 406 >UniRef50_P45679 Ribosomal RNA small subunit methyltransferase B n=6 Tax=Coxiella burnetii RepID=RSMB_COXBU Length = 430 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 188/433 (43%), Positives = 267/433 (61%), Gaps = 14/433 (3%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R+ A V QVV++ SL+ +L + K+++L+QELC+G LR +L + KL Sbjct: 2 NTRATTAILVNQVVQKKCSLTALLSA-----NKKNQSLIQELCYGTLRWYFKLKLIAEKL 56 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 + P+ K + LI+ G YQL Y IP H + +TV A +K+P KGLIN +LR+F Sbjct: 57 LHAPLRDKDHDIFCLILTGFYQLNYLNIPTHTIVNQTVGAAEILKKPWAKGLINKLLRRF 116 Query: 126 QRQQEELLA-EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 +++ELL + +Y HP W ++ ++KA+P+ W+SI+ ANN RPPM LR+N T S Sbjct: 117 IAEKDELLTFTEKTIEGQYAHPLWFIQHIKKAWPDHWESILIANNARPPMTLRVNLTKIS 176 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 R+ +L +LD+ + P P A++LE P VH LPGF +G+ +QDA+ Q L Sbjct: 177 REIYLEMLDQKNISAKPLDFLPAAIQLEKPCSVHQLPGFNEGYCYIQDAAGQFAAYLLKL 236 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQ-VVAVDIDEQRLSRVYDNLKRLGMKATVKQ-- 301 +N + +LD CAAPG KT+HILEV P + +VA+D ++QRL+R+ +N+ RLG++ Q Sbjct: 237 ENNQTVLDACAAPGSKTSHILEVNPHLKTLVAIDNNKQRLNRIKENITRLGLRQEHLQCL 296 Query: 302 -GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 D QW + FDRILLDAPCSATGVIRRHPDIK LR+ DI + Q + ++L+A+ Sbjct: 297 LADVSQIDQWSSGELFDRILLDAPCSATGVIRRHPDIKLLRQPGDISQYHQKKLQLLNAL 356 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAE 416 W LK GG L+Y+TCSVLP+EN I+ FL EL T G + G Q LPG + Sbjct: 357 WTVLKAGGFLLYSTCSVLPDENEKVIEEFLSTHDKVELSPTNVHGGLQLKYGVQQLPGQD 416 Query: 417 EGDGFFYAKLIKK 429 DGF+Y+ L K Sbjct: 417 NKDGFYYSLLFKN 429 >UniRef50_C9L6W4 Ribosomal RNA small subunit methyltransferase B n=12 Tax=Clostridiales RepID=C9L6W4_RUMHA Length = 454 Score = 446 bits (1148), Expect = e-124, Method: Composition-based stats. Identities = 118/449 (26%), Positives = 207/449 (46%), Gaps = 20/449 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M + NLR + + ++ ++GQ ++ +K + +++A L +C G L + Sbjct: 1 MVNKVNLRELVLGILLEINKEGQHSHLVIRSTLEKYQYLEKQERAFLTRVCEGTLEYKLR 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKG 116 LD+++++ + P+ + + ++ +YQLLY +P A E V+ A L G Sbjct: 61 LDYILDQYSSVPVEKMKPVIREILRSSVYQLLYMDNVPDSAVCDEAVKLARKKGFYNLTG 120 Query: 117 LINGVLRQFQRQ-----QEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +NGVLR+ R+ E Y P WL+++ Y E+ + ++EA Sbjct: 121 FVNGVLRKVAREYGSIHFPEKDQPVEYLSVLYSMPKWLVEKFLGEYGFEKTEKMLEAFLT 180 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P +RI + + + L L + P +A ++ + AL F G + V Sbjct: 181 EKPTTIRIRQHLVDKGAVLDSLKRQKVTVEPAPYVENAYYIKDYDYLPALEAFRMGNIQV 240 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDN 289 QD S+ P+ G++++DLCAAPGGKT I + + ++ A DI + + +N Sbjct: 241 QDVSSMLVGEVADPKEGDYVIDLCAAPGGKTLCIADKLKGTGRIDARDISRTKTDLIREN 300 Query: 290 LKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 R V ++ D ++ D PCS GVI + DIK+ I EL Sbjct: 301 AIRQNFLNVVVTEKDATQLDSESFEKADILIADVPCSGLGVIGKKTDIKYNITQNGIAEL 360 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA-DAELCE-------- 400 LQ +IL+ ++K GGTL+Y+TC++ EEN ++ F++ + E + Sbjct: 361 VNLQRKILEQASTYVKPGGTLIYSTCTINKEENIENVRWFVENYPYELESIDDYLCEELR 420 Query: 401 TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + T ++ Q L G + DGFF A+L +K Sbjct: 421 SDTTKEGYLQLLSGVHDCDGFFIARLKRK 449 >UniRef50_Q2LRX5 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRX5_SYNAS Length = 471 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 136/451 (30%), Positives = 215/451 (47%), Gaps = 27/451 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKV---SDKDKALLQELCFGVLRTLSQLDW 60 + + RS+A + ++++ G +L + S D+ LL L +G LR +LDW Sbjct: 21 KISPRSLAVEILDRIDTTGAFAEPLLDAFLRDHLLDSAPDRHLLTSLVYGTLRMRGRLDW 80 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I +L + Q + ++ LYQ L+ RIP A + E VE A ++ P + L+N Sbjct: 81 IIQQLYQGRFSSMQGGIRNILRTALYQFLFMERIPAFALVDEAVELAK-LRYPGREKLVN 139 Query: 120 GVLRQFQRQ--------QEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +LR R+ + + HP WL++R Y E+ +S+ ANNQ Sbjct: 140 ALLRNAVRKVSANELSYPDFQKTPVEHIAVMHSHPPWLVRRWLSVYGTERCRSLCMANNQ 199 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAP-VHALPGFEDGWVT 229 PP+ +R+N R + +L+ G + PDA+ + P + +G Sbjct: 200 VPPVAIRVNSLKADRSTLKEILEHEGFTVSESSFSPDALLITDPPRHLRLTSTSREGLFI 259 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYD 288 +QD ++Q +AP GE ILD+C G KTTH+ + + +++AVD+ +L + Sbjct: 260 LQDEASQLIGRLVAPAAGEAILDVCCGTGVKTTHLASLMSNQGRILAVDLYPAKLEALNR 319 Query: 289 NLKRLGMKAT-VKQGDG-RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 R+G+ ++Q D + FDRIL+DAPCS G +RR+P+IKW + R + Sbjct: 320 LSSRMGISNIEIRQADASTMEDETAFRNMFDRILVDAPCSGLGTLRRNPEIKWRLQPRAL 379 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC------- 399 P ++LQ +IL+ L GG LVY+TC++LPEEN L I FL R + Sbjct: 380 PSYSRLQEQILNRAAAFLHRGGCLVYSTCTILPEENELLIGKFLSRHDEFRQIRLSDASF 439 Query: 400 --ETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 T E + P DGFF A L K Sbjct: 440 AYPTLVDENGFFRTAPDTSGMDGFFAALLTK 470 >UniRef50_UPI0000E0DBE4 Putative Sun protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0DBE4 Length = 442 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 179/430 (41%), Positives = 252/430 (58%), Gaps = 10/430 (2%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R+ AA + Q++E+G S L + +D+A LQE+ FG LRTL L + + L+ Sbjct: 10 RADAAWVLFQILEKGVSSKQALAQRLEHYQGRDRAWLQEMVFGCLRTLPTLQFWLRGLLD 69 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 +P+ G+++ + +LI++GLYQ+ Y+R+ HAA++ETV A +K LK LIN +LR F R Sbjct: 70 KPLKGRKKILEHLILIGLYQIAYSRVSEHAAVSETVGAADLLKGTTLKALINAILRTFIR 129 Query: 128 QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 + A + A+ P+W+ K + Y E Q +++ +NQ+ P+WLR+N H S + Sbjct: 130 EDVANTAP-ESLAAQAGMPNWIFKAINNHYAEHAQLVIDESNQKAPLWLRVNPAHISPEG 188 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 L G+ +PDAV+ V PG++ GW VQD +AQ L Q G Sbjct: 189 MQTQLQAMGIDTELKNTHPDAVQCLKSGDVTQFPGYDKGWFAVQDGAAQLAAQLLDVQPG 248 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQ-VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 +LD CAAPGGKT HIL PE + VA+D D RL RV +NL RLG +AT+ Sbjct: 249 HRVLDCCAAPGGKTAHILASQPELEECVAIDNDPSRLVRVEENLARLGHEATLICAAAED 308 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 W G + FDRILLDAPCSATGVIRRHPDI+WLR+ DI L +Q+E+L +W L+ Sbjct: 309 VEGWYGGEPFDRILLDAPCSATGVIRRHPDIRWLRQASDIAPLVAIQAELLMQMWQILQP 368 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP--------EQPGKQNLPGAEEG 418 GG L+YATCS+LPEENS QI+ F+ + +A + T ++ G Q LPG + Sbjct: 369 GGKLLYATCSILPEENSQQIQTFIAQHPEAVVLPIPTSLSELTTVNDEFGLQVLPGDADM 428 Query: 419 DGFFYAKLIK 428 DGF+Y L K Sbjct: 429 DGFYYTLLQK 438 >UniRef50_A7VUU4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUU4_9CLOT Length = 446 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 124/447 (27%), Positives = 209/447 (46%), Gaps = 22/447 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQL 58 M +N R A +A+ +V E + +L + +D A L +GVL L Sbjct: 1 MSAGKNARLTALKALLRVEEGKGYSNLVLDHGLAASGLDGRDAAFASALFYGVLERRITL 60 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 D+ I++ P++ V ++ +G YQLLY ++P AA+ E+V+ A+K+ + G Sbjct: 61 DYQISRYSKMPLSQMAAPVREILRLGFYQLLYMDKVPQSAAVNESVKLTRAVKKDKASGF 120 Query: 118 INGVLRQFQRQQEELLAEFNA----SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 +NG+LR F R +Y P W++ +Y E+ +VE RP Sbjct: 121 VNGILRSFIRDGCPCRLPAETADDYLMVKYACPQWIIDLWITSYGRERALELVENLTGRP 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P+ +R+N +R++ L E G++ A+ LE + +L F+DG+ VQD Sbjct: 181 PLAVRVNSCKTTREALTERLKEEGVETKEVPGVEQALTLERSGSIESLSSFQDGFFHVQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLK 291 ++Q C L+P+ GE + D+CAAPGGKT + E+ + ++ + D+ ++ + K Sbjct: 241 LASQLCCQALSPKPGERVYDVCAAPGGKTFTMAELMENQGELSSFDLYPAKVKLIQQGAK 300 Query: 292 RLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ + D +P + D++L D PCS G+IRR P+I++ + + L Sbjct: 301 RLGLSVVNARIRDAAHPEEMLPPG--DKVLCDVPCSGLGIIRRKPEIRY-KNKNMLDSLP 357 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQ 410 LQ IL K G L+Y+TC++ P EN+ + FL D E PE + Sbjct: 358 DLQYLILCISANLTKKHGVLLYSTCTLNPGENNQVARRFLLEHPDFEPYPVSLPEGYERN 417 Query: 411 NLP---------GAEEGDGFFYAKLIK 428 + DGFF++ + Sbjct: 418 SFDRENEATLFVKKNGTDGFFFSGFRR 444 >UniRef50_Q0AXL7 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXL7_SYNWW Length = 456 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 126/452 (27%), Positives = 214/452 (47%), Gaps = 26/452 (5%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLD 59 K R MAA+ V +V+E+G + L + +S D+ LL E+ G +R + LD Sbjct: 7 KAVNKARIMAAEIVYEVMERGAFANLALAKALRNSDLSAADRHLLTEIVNGTVRMIKHLD 66 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLI 118 W++ + P+ + + ++ LYQL++ ++P +A + + VE + ++ G+ Sbjct: 67 WVLELFLHSPIKKQNPYLLSILRTALYQLMFLAKVPDYALVNDAVEISRQKMGAKMAGVS 126 Query: 119 NGVLRQFQRQQEELLAEFNASD---ARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPM 174 N VLR R+ +++ + Y HP WL+K Q ++++ NN R + Sbjct: 127 NAVLRNIIRKLDKIKYPDDPVSFYSIYYSHPDWLVKLWLDTLGTQACETLLAYNNSRSRV 186 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDA 233 LR N SR+ + L+E G+K P + +E P P+ F+ G+ +Q+ Sbjct: 187 VLRCNPLKCSREELIDKLEEEGVKAQLSPLTPWGIVVEDNPQPIAETASFKKGYFYIQNE 246 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKR 292 ++ L P GE +LDLC GGKTTH+ E +V+AV+ Q+L + N +R Sbjct: 247 ASMLAAAILNPPAGERVLDLCCGVGGKTTHLAEYMNNQGEVLAVEFYAQKLELLRQNCQR 306 Query: 293 LGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+ + D R + + ++ +LLDAPCS GV+ R D +W + +I EL Q Sbjct: 307 LGLGIVKDLEKDIRTLNSKEVKARY--LLLDAPCSGWGVLNRRADARWRKNQEEINELTQ 364 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC------------ 399 LQ++ + ++ G L+YATC++ EN I+ FL+ L Sbjct: 365 LQAQFISHAATMVEKQGYLLYATCTINQAENEEIIEGFLEENQHFVLEGFLSKLSFFPLD 424 Query: 400 --ETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + + + +PG DG FYA L +K Sbjct: 425 KPDKASANRGMLTLMPGKYGTDGMFYALLRRK 456 >UniRef50_C0EFK3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFK3_9CLOT Length = 441 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 125/440 (28%), Positives = 197/440 (44%), Gaps = 18/440 (4%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWL 61 R R +A A+ ++ +QG + + +S +D+ +L +GVL T LD++ Sbjct: 3 NRTARDLALSALLKMDKQGAYSNLAFDGMLSSSSLSPRDRDFAAKLFYGVLETKITLDYI 62 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 I V ++ +GLYQ+ Y + AA+ E+V + G +N + Sbjct: 63 IASYATMKPEKISSDVRNILRLGLYQIKYLDLEDFAAVNESVNLVKLRGKKSASGFVNAI 122 Query: 122 LRQFQRQQEELL---AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 LR F R + + R+ P WL++ Y E + I+E+ RPP+ LR Sbjct: 123 LRAFLRDGKNIPLPEDPDERLSVRFSCPVWLVRSFVGEYGRETAERILESQLGRPPLTLR 182 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 +N S ++ ALL + G++ PH V + + F +G VQD S+Q Sbjct: 183 VNTLKTSAETLCALLQQEGIEAVPHPQEQTCVEVLGGGALTGTKAFAEGLFHVQDISSQL 242 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGM- 295 C +A +LD+CAAPGGKT I E+ A++ A D+ ++R+ + RLG+ Sbjct: 243 CARTVASYAPRTLLDVCAAPGGKTFTIAEELGDAAEITACDLHKKRVGLIKQGAARLGLC 302 Query: 296 KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 + D + QFD +L D PCS GVIRR P+IK+ + + L +Q Sbjct: 303 SVDAVESDASKANDRF--GQFDAVLCDVPCSGFGVIRRKPEIKY-KPQESLQGLPAIQGN 359 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE-------LCETGTPEQPG 408 IL ++K GG L+Y+TC++ EN + FL+R L + Sbjct: 360 ILQTSASYVKEGGMLIYSTCTIAKRENEQVVDEFLRRNPAFVPAKLPGFLHQWVPDAVNR 419 Query: 409 KQNLPGAEEGDGFFYAKLIK 428 LPG DGFF A K Sbjct: 420 VTFLPGVHNSDGFFLAVFQK 439 >UniRef50_Q7A601 SA1060 protein n=63 Tax=Staphylococcaceae RepID=Q7A601_STAAN Length = 461 Score = 442 bits (1139), Expect = e-123, Method: Composition-based stats. Identities = 121/438 (27%), Positives = 208/438 (47%), Gaps = 22/438 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+RS+A ++ ++ +G + + + +++ DKAL E+ +G ++ LD+ + Sbjct: 30 NVRSLAFDTIQDILNEGAYSNLRINEVLSENELNAMDKALFTEIVYGTVKRKYTLDFYLK 89 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + V L+ + +YQ +Y ++P HA + E VE A ++NG+L Sbjct: 90 PFVKTKIKA---WVRQLLWMSIYQYVYLDKVPNHAIINEAVEIAKERGGYHNGNVVNGIL 146 Query: 123 RQFQR----QQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 R R E+ Y P W++ Y E+ ++I+++ + +R Sbjct: 147 RTMMRSDLPDFNEIADPKKRMAIEYSMPKWIIDHWATHYGLEETETILQSFLETTSTTVR 206 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 N T S D + L + G D P + + P+ F+DG+V++QD S+ Sbjct: 207 ANLTRASLDDIIEKLQDEGYDVEKDHDLPYCLHI-GGQPIIHSRSFKDGFVSIQDKSSMF 265 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 + +H+LD C+APGGK HI E + PE QV A DI + ++ + N+K+L + Sbjct: 266 VAHIMNVDRHDHVLDACSAPGGKACHIAEVLMPEGQVDASDIHDHKIDLINFNIKKLRLT 325 Query: 297 ATVK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 Q D P +D+IL+DAPCS GV+R P+IK+ + + I L +LQ E Sbjct: 326 NIKAFQHDATKPYDK----TYDKILVDAPCSGLGVMRHKPEIKYTQSKQHIESLVELQLE 381 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG----KQN 411 IL+ + ++K GG ++Y+TC++ EN I FL+ + E P Q Sbjct: 382 ILENVKNNVKIGGEIIYSTCTIEQLENENVIYTFLKNNKNFEFEPFQHPITGELVKTLQI 441 Query: 412 LPGAEEGDGFFYAKLIKK 429 +P DGFF K+ +K Sbjct: 442 MPQDFNSDGFFITKIKRK 459 >UniRef50_A8ZUK3 Sun protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUK3_DESOH Length = 468 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 134/451 (29%), Positives = 213/451 (47%), Gaps = 24/451 (5%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVS---DKDKALLQELCFGVLRTLSQLD 59 ++ + R++A + + + + ++L + +VS +D+AL+ L +GVLR + LD Sbjct: 17 RKSDPRAVALRILTALEKGHRTLDQVADEALARVSFPEKRDRALVTTLVYGVLRWRNTLD 76 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 + I P+ V ++ +GL+QL + RIP AA+ +V+ + +L G + Sbjct: 77 YTIVHFSRTPLQRMDPAVLNILRLGLFQLRFLDRIPDFAAINSSVDLSKQAGLGRLSGFV 136 Query: 119 NGVLRQFQRQQEELLAE------FNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 NG+LR R E A P W+++R + E+ + + N Sbjct: 137 NGLLRSSTRHPGEPDPPDMDKDPVQALCVTKSFPEWMIRRWIARFGIEETVQLCDFLNTV 196 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETP-APVHALPGFEDGWVTV 230 PP+ +R+N + + A L + P P+AV +P PVH + F GW V Sbjct: 197 PPITVRVNGLRAAPEQVAASLAQEAAGVTPGRHAPEAVSFSSPKVPVHEMTAFGAGWFQV 256 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 QD +AQ P+ G+ +LD CA GGKT H+ + + ++VA D D +L R+ Sbjct: 257 QDEAAQLIGLLTDPRPGQRVLDACAGLGGKTGHLARLMENQGRIVAADRDTAKLERLAGE 316 Query: 290 LKRLGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 + RLG+ D P Q FDR+L D PCS TGVIRR+PD KW ++D+ Sbjct: 317 MTRLGITNVRPMTLDMLVPEQLKDAGGFDRVLADCPCSGTGVIRRNPDTKWRLSEQDLAR 376 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL---------- 398 L Q +L + H++ GG LVYA CS+ PEEN +++FL+R D + Sbjct: 377 LQNDQIAMLTNLADHVRDGGLLVYAVCSMEPEENDAVVQSFLKRRPDFAIDTGVAADVPA 436 Query: 399 CETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 T + + P DGFF +L K Sbjct: 437 VAGFTDDPGFFRTFPWRHGMDGFFGVRLKKN 467 >UniRef50_B5YF43 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Dictyoglomus RepID=B5YF43_DICT6 Length = 430 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 114/430 (26%), Positives = 203/430 (47%), Gaps = 11/430 (2%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +R AA+ + + ++ L+ +L +S K+K + EL +GV R + LD++ ++ Sbjct: 3 VRLKAAEILYDLEKREAYLNLLLRSRLPSYNLSLKEKHFITELVYGVTRWKTTLDYIWSR 62 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + R L+ + Y + + + A+ E VE A P+ LIN V R Sbjct: 63 FVKR--DNLSLFGRILLRLVAYHIYFLKDTILPIAVNEIVEIAKRKV-PKEAKLINAVSR 119 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINRTH 182 + +++ L RY P ++ + Q + + I+ N+ + +R+N Sbjct: 120 RMVKERNNLDLNLIPFHIRYAIPEFIFEEWQDYIGKGEAVKILGWLNKAHNIAIRVNTLK 179 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 S + L E G+K A+ +E F +G+ +Q ++ L Sbjct: 180 ISVEDLKEKLKERGIKFKDGNLVTQALLIEDGFDFEKSDLFHNGYFVIQSEASMLPALIL 239 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 P+ G ++DLC+APG K+TH+ E+ ++V+VDI++ R+ V +N KRLG+ Sbjct: 240 NPEPGSRVIDLCSAPGLKSTHLAELMNNKGKIVSVDINKNRVKLVEENAKRLGISIIETL 299 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 + FDR+LLDAPCS GVI P+IKW + DI +L+++Q ++L+ Sbjct: 300 AEDVLNLPDSLNGTFDRVLLDAPCSGLGVISHKPEIKWRLKREDIYKLSEMQIKMLERAG 359 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET---GTPEQPGKQNLPGAEEG 418 LK GG +VY+TC++ EN + FL+R + +L + G + +P + Sbjct: 360 KLLKKGGRMVYSTCTITWHENENVVLYFLERNPEFKLIDFFYKGEKFPGIMRVIPYKYKT 419 Query: 419 DGFFYAKLIK 428 DGFF + + + Sbjct: 420 DGFFISLIGR 429 >UniRef50_A5GRG8 Ribosomal RNA small subunit methyltransferase B n=19 Tax=cellular organisms RepID=A5GRG8_SYNR3 Length = 454 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 146/433 (33%), Positives = 218/433 (50%), Gaps = 24/433 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLIN 63 R +A + +E V G L + K+S +D+ L EL +G +R +LD ++ Sbjct: 30 PPRLVAWRVLEAV-GDGAYADLALERELKRSKLSPRDRGLATELAYGAIRQRRRLDGWLD 88 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 L P + + +L+ VGL Q+L R+P AA++ VE A + +L ++NGVL Sbjct: 89 LLGKVPAAKQPPRLRWLLHVGLQQILLMDRVPASAAVSTAVELAKRERLQRLAPVVNGVL 148 Query: 123 RQFQRQQEELL------AEFNASDARYLHPSWLL-KRLQKAYPEQWQSIVEANNQRPPMW 175 R R E + P WL+ + + PE+ +++ A+N+ PP+ Sbjct: 149 RAAVRAVEAGESLPVPSDPQKRLALEHSLPDWLVAELWGQIGPERTEALAAASNRIPPLD 208 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDAS 234 LR NR SR++ L L A+ PD + L + P P+ L GF +G VQD + Sbjct: 209 LRCNRLRSSREALLENL-----PAVALAELPDGLTLTSRPGPLPQLAGFSEGQWCVQDRA 263 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRL 293 AQ L P+ G+ +LD CAAPGGKTTHI E+ + +VVAVD+ +RL +V N +RL Sbjct: 264 AQRIAPLLDPKPGQRVLDACAAPGGKTTHIAELMGDQGEVVAVDVAPRRLQQVSANAERL 323 Query: 294 GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 G+ + + FDR+LLD PCS G + RH D +W + I EL LQ Sbjct: 324 GLSCIRTEAADATDLTDWEAESFDRVLLDVPCSGLGTLARHADARWNLKPDGIEELVGLQ 383 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLP 413 ++L+ LK G LVYATC+V P EN+ ++AF++ D + +P Q P Sbjct: 384 HQLLEQGARLLKPDGRLVYATCTVHPAENTGVVEAFVEENPDWQF------SEPPMQLWP 437 Query: 414 GAEEGDGFFYAKL 426 + GDGFF A L Sbjct: 438 DPQGGDGFFAAVL 450 >UniRef50_A5VKQ4 Sun protein n=14 Tax=Lactobacillus RepID=A5VKQ4_LACRD Length = 449 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 132/450 (29%), Positives = 221/450 (49%), Gaps = 25/450 (5%) Query: 1 MKKQ---RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTL 55 MK + +N R +A A+E VVE G + + L +K ++DKD+ L + +GVL+ Sbjct: 1 MKTKFQPQNARELALVALEGVVENGAYSNLQVDQLLKKYPLADKDRRLATNIIYGVLQHK 60 Query: 56 SQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQL 114 L++ +N + V L++ LYQ Y R+P A E++E A P + Sbjct: 61 LTLEYWLNGFIQG--KRLDPWVKTLLLSALYQYHYLERVPDWAVTDESIEIAKRRGNPGI 118 Query: 115 KGLINGVLRQFQRQQEELL----AEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANN 169 + + GVL R+ L P WL+ L Y E+ + I+++ N Sbjct: 119 RKFVTGVLHAILRKGLPDLRQINERDLRLSIENSVPRWLVNELTGEYGEEDTEKILQSIN 178 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 + +R+N + LD AG++ +A+ + + + F++G +T Sbjct: 179 EPAHQVIRVNTAKTDLPTVKQTLDAAGIEYQEGQVAQNALVITKGE-IISSDLFKNGEIT 237 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE--AQVVAVDIDEQRLSRVY 287 +QD SA + + + G+ +LD CAAPGGKT I E + V A+DI + ++ + Sbjct: 238 IQDESAMLAVESMHIEPGDKVLDACAAPGGKTVQIAETLADEDGHVDALDIHQHKVRLIE 297 Query: 288 DNLKRLGMKATVKQG--DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 N +RLG++ V D R Q ++ FD+IL+DAPCS G++RR P+I++ + D Sbjct: 298 KNARRLGVEKRVTAHALDAREVDQLFDDESFDKILVDAPCSGIGLLRRKPEIRYTKTLND 357 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE 405 +L ++Q IL+A+ +K GG + Y+TC++L +EN ++AFL + EL +T T Sbjct: 358 SKQLHKIQLAILNAVAAKVKKGGIITYSTCTILRQENDDTVQAFLAEHPEFELVKTTTAR 417 Query: 406 Q-------PGKQNLPGAEEGDGFFYAKLIK 428 + P LP + DGFF + L K Sbjct: 418 KVKDNRHSPTLTILPSDFDSDGFFISSLKK 447 >UniRef50_A1AVP0 Sun protein n=1 Tax=Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) RepID=A1AVP0_RUTMC Length = 421 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 165/426 (38%), Positives = 241/426 (56%), Gaps = 16/426 (3%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R +A +A+ V+ +SLS D D L++ L FG +R QL+ +++K + Sbjct: 6 TRFIALEAIYSVIINKKSLS-----AFNYPKDNDTPLIKSLVFGTIRFYHQLNDIVSKRL 60 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 + VH L+++G YQLLY++I HA++ ETV A+ +P K L+N +LR+ Sbjct: 61 KHSFKKEDLDVHCLMLLGAYQLLYSKIAIHASIFETVNVVNALNKPWAKALVNAILRKID 120 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 R + + Y HPSWL+K++++ YP +++I + NN + PM +R++ + + D Sbjct: 121 RDK-----KILQQQVHYSHPSWLVKKIKRDYPNDFETIFKQNNTQAPMTIRVHTS-LNLD 174 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 + L + G+ A P A+ L+ V L FE G VQDASAQ + L P+N Sbjct: 175 HYQQQLQQEGISSQKLAITPQALVLDKATTVFNLVKFEQGACYVQDASAQLSVPLLNPKN 234 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 + ILD C+APGGK TH+ E+AP+ +V+A+D D +RL ++ N +RL + Sbjct: 235 TDLILDACSAPGGKATHLCELAPQCKVIALDNDNKRLIKISQNAQRLKITNIQTILGSAQ 294 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 W Q FD+IL DAPCSATGVIRRHPDIK LR+ +DI L LQ IL+ +W LK Sbjct: 295 NQDWWDSQLFDKILFDAPCSATGVIRRHPDIKLLRKPKDITTLVVLQKNILENLWQMLKP 354 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEEGDGFF 422 G L+YATCS+L EN QIK FL DA+ + G G+Q LP + DGF+ Sbjct: 355 SGILLYATCSILKVENEQQIKYFLNTHYDAKEIKIELDWGINTTVGRQQLP-TDNFDGFY 413 Query: 423 YAKLIK 428 YAK+IK Sbjct: 414 YAKIIK 419 >UniRef50_Q88RR3 Ribosomal RNA small subunit methyltransferase B n=10 Tax=Gammaproteobacteria RepID=RSMB_PSEPK Length = 436 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 205/417 (49%), Positives = 260/417 (62%), Gaps = 6/417 (1%) Query: 18 VVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV 77 V+ SL++ LP KV ++D+ L Q+L FG R +LD L +L+ +P V Sbjct: 14 VLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQLLQKPFKAADADV 73 Query: 78 HYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFN 137 L++VGLYQL YTRIP HAA+ ETV A +K+P KGL+N VLR+ QR+ EELLA Sbjct: 74 QALLLVGLYQLFYTRIPAHAAIGETVGCADKLKKPWAKGLLNAVLRRAQREGEELLAGME 133 Query: 138 ASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAG 196 R HP WL K L+ +PEQW++I ANN PPM LR+NR HHSRD++LALL EAG Sbjct: 134 RDPVVRTAHPRWLQKALKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLALLAEAG 193 Query: 197 MKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAA 256 + D + L V LPGF +GWV+VQD +AQ L G+ +LD C A Sbjct: 194 IGASACQYSRDGIVLAEACDVRGLPGFAEGWVSVQDEAAQLSADLLELAPGQRVLDACCA 253 Query: 257 PGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ 315 PGGKT H+LE A A +VA+D++ +RL+RV +NL RL + A + D R + W + Sbjct: 254 PGGKTCHLLEAEAGLANMVAIDLEAKRLTRVRENLDRLQLDAELIACDARDTASWWDGKP 313 Query: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 F RILLDAPCSATGVIRRHPDIK R+ DIP LA LQ E+LDA+WP L+ GG L+YATC Sbjct: 314 FQRILLDAPCSATGVIRRHPDIKMTRQADDIPALATLQGELLDALWPTLEVGGMLLYATC 373 Query: 376 SVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAEEGDGFFYAKLIK 428 S LP EN+ IKAFL RT A + G + G+Q L DGF+YAKLIK Sbjct: 374 STLPTENTEVIKAFLARTPGARELDLATEAGLRQPHGRQLLAQEGGHDGFYYAKLIK 430 >UniRef50_UPI0001C36EDB sun protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EDB Length = 443 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 115/444 (25%), Positives = 199/444 (44%), Gaps = 23/444 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 + R A + +++ G + L + +S +DK L +GV+ LD ++ Sbjct: 3 DPRYTAVKLLDKTFRSGSYSNIQLDAGLKNSDLSPQDKRFCTALYYGVIERKITLDHILT 62 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 L +RP++ + ++ G+YQLLY +P +AA+ E+V+ A + G++N VL Sbjct: 63 GLSSRPLSKLDSIIITILRCGIYQLLYMENVPDNAAVNESVKLAKKFGKTSASGMVNAVL 122 Query: 123 RQFQRQQEEL---LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRI 178 R F R+ ++ E Y P+ L++ + Y E + + + P ++R+ Sbjct: 123 RNFIRKGKKYDMSKNEIERMSVEYSIPAELIESVVNDYGMENAKDLFVDSLGEAPTFIRV 182 Query: 179 NRTHHS-RDSWLALLDEAGMK--GFPHADYPDAVRLETPAPVHALPG---FEDGWVTVQD 232 N D L++ G + P ++ ++ L F G VQD Sbjct: 183 NNIGDDEADEDREFLEKWGDRSFFEKSPLLPHCYKVNDKVGLYNLESNDMFIMGLFHVQD 242 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLK 291 ++Q C +AP + +LD+CAAPGGKT + E+ + Q+ A D+ + R+ + + Sbjct: 243 LASQLCCAAVAPTENDIVLDMCAAPGGKTFTMAEMMDGKGQIYAFDLHKHRVGLIEEGAA 302 Query: 292 RLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RL + + D + +IL D PCS GVIR+ P+I++ + D L Sbjct: 303 RLELSNVKAEARDATKYYDDIPKAT--KILCDVPCSGYGVIRKKPEIRY-KSISDFERLP 359 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-----E 405 ++Q +I + +L GG +VY+TC+V EN ++ L + EL E P Sbjct: 360 EIQYKIAENALNYLADGGEMVYSTCTVRKAENEDVVQRLLANHPELELAELPQPLGSVFS 419 Query: 406 QPGKQNLPGAEEGDGFFYAKLIKK 429 P DGFF AKL +K Sbjct: 420 GGMAAIFPHHFGSDGFFIAKLRRK 443 >UniRef50_A5KNU7 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5KNU7_9FIRM Length = 456 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 113/454 (24%), Positives = 205/454 (45%), Gaps = 25/454 (5%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ---QKVSDKDKALLQELCFGVLRTLSQ 57 M K N R + A + +V E G+ +L + Q + +++A + + G L +++ Sbjct: 1 MAKAINEREIVAAILMEVTENGRYSHIVLREVLTKYQYLEKRERAFITRVTEGTLEHMTE 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKG 116 +D++++ + + + ++ +YQ+ Y IP HA +E+V+ A+ L+G Sbjct: 61 IDYILDCFSKVKVKKMKPLIRAILRSAVYQIKYMDSIPDHAVCSESVKLAVKKGFSGLRG 120 Query: 117 LINGVLRQFQRQQEELL---AEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRP 172 +NGVLR + +E+ RY P W+++ ++ Y +++++ Sbjct: 121 YVNGVLRSVVKGIDEVEYPSDPIKRLSVRYSCPEWIIRLWKETYDLSLIETMLKDFQTEK 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P +R R+ + + L+E + H DA+ + + +L F +G VQD Sbjct: 181 PTTIRRCRSRITMEQLKKRLEEEHVLVENHPYLKDALLISKYDYLESLETFREGLFVVQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE--VAPE-----AQVVAVDIDEQRLSR 285 S+ Q G ++DLCAAPGGK + E + V A D+ E ++S Sbjct: 241 ISSMLVGELAHVQAGAQVIDLCAAPGGKALDVAERILMEGQAGCSGHVEARDLTEYKVSL 300 Query: 286 VYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 + +N++R+G+ + D ++ D PCS GV+ + D+K+ Sbjct: 301 IEENIERMGLCNVTAVCQDASVYDEKSAGKADIVIADLPCSGLGVLGKKTDLKYKASPEG 360 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET---- 401 I L +LQ +IL ++K GG L+Y+TC+V P+EN + FL+ + + Sbjct: 361 IVSLVKLQRKILSCAASYVKPGGELLYSTCTVNPKENIENVHWFLKEFPEFYADDIREDL 420 Query: 402 ------GTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 E Q LPG + DGFF A+L KK Sbjct: 421 CLELRESVTENGCIQLLPGVHKSDGFFIARLRKK 454 >UniRef50_A8RWU3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8RWU3_9CLOT Length = 455 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 122/439 (27%), Positives = 198/439 (45%), Gaps = 23/439 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R + + +V+EQG + +L QK + D++ + G L L Q+D +IN+ Sbjct: 12 REIVLDILTEVLEQGAFVHLVLNQALQKYQYLGKADRSFITRAVEGTLEYLIQIDEVINR 71 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + + L+ + +YQ+LY R+P A E V+ A+ LKG +NGVLR Sbjct: 72 YSKTKINKMKPFIRSLLRMSVYQILYMDRVPDSAVCNEAVKMAVKRHFSGLKGFVNGVLR 131 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH 182 R++E L F+ RY P W+ +K + E+ + I + + P W+R N Sbjct: 132 TISREKENLT--FDTPSLRYSIPEWMYAMWEKEFGKEKAEKIAASFLEDKPTWVRCNLHR 189 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R+S LA L G + ++ + L F GW+ VQD ++ Sbjct: 190 ADRESILASLKAQGTSVRELPFMESMIAIDGYDYLEGLDAFRKGWIQVQDVTSAFVGEIA 249 Query: 243 APQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 +P+ +I+D+CAAPGGK+ H+ + + V A D+ Q+ + + +N+ R G+ Sbjct: 250 SPEKDSYIIDVCAAPGGKSLHLADKLEGTGMVEARDLTYQKTALIEENMARCGVTNMKTL 309 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 + + D ++ D PCS G+I R PDIK+ + ELA LQ EIL +W Sbjct: 310 VWDALETDLSAMAKADIVIADLPCSGLGIIGRKPDIKYNMTPEKLEELAGLQREILSVVW 369 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG------------K 409 ++K GG L Y+TC++ EN R L ++ G Sbjct: 370 QYVKPGGLLCYSTCTIDRLENQDNAAWLRDRFP---LVPVDLTDRFGGLPQEPSLKDGWI 426 Query: 410 QNLPGAEEGDGFFYAKLIK 428 Q LPG DGFF + + Sbjct: 427 QFLPGVHPYDGFFISVFRR 445 >UniRef50_C0QI57 RsmB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI57_DESAH Length = 455 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 136/445 (30%), Positives = 204/445 (45%), Gaps = 17/445 (3%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD---KDKALLQELCFGVLRTLSQL 58 + ++ R +A + + +L IL ++ +D+AL + +G LR L Sbjct: 11 EPIKDPRFLALTILIENESSKFTLDKILERYSAQLESLAHRDRALANAIIYGTLRWKEHL 70 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 DWLI RP+ + + Y + LYQ ++ +IP AA+ V A + G Sbjct: 71 DWLITPFSKRPLDQIEPAICYTLRTALYQTVFMDKIPVSAAVNTAVNAAKKLSNTGAAGF 130 Query: 118 INGVLRQFQ-RQQEELLAEFNASDARY-----LHPSWLLKRLQKAYPEQW-QSIVEANNQ 170 +N VLR+ R + + + A + P WL +R + + ++++A N Sbjct: 131 VNAVLRKATTRYMDVAMPDSKKDPALFISKSQSIPLWLSRRWIRRFGLDASIALLDAINT 190 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPA-PVHALPGFEDGWVT 229 PP+ LR N R S L+ P PD + + P P+H F++G Sbjct: 191 IPPITLRANTLRTDRASLATALEPHVETIVPTFHTPDGLSVTRPRTPLHLTTAFKEGLFQ 250 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYD 288 VQD + Q T LAPQ GE ILD CA GGKT H+ ++ ++ A D+D ++L+ + + Sbjct: 251 VQDEATQIVTTLLAPQPGERILDACAGLGGKTGHMGQIMNNQGKIEAWDLDARKLAVLGN 310 Query: 289 NLKRLGMKATVK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 +KRLG+ Q D FDR+L+DAPC+ GV+RR+PD +W R DI Sbjct: 311 EMKRLGITNVTTKQMDALDIDPAECNTPFDRVLVDAPCTGLGVLRRNPDARWRRTLGDIK 370 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP--- 404 LA LQ IL+ + +K GG LVYA CS PEEN I FL L Sbjct: 371 RLADLQKRILNNLADLVKPGGILVYAVCSCEPEENEGVIDWFLNNQKSFALVPQSHDLAS 430 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIKK 429 + + P DGFF A + K Sbjct: 431 QDGIFKTYPHPLGMDGFFAATMKKN 455 >UniRef50_B0MPP7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPP7_9FIRM Length = 439 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 122/443 (27%), Positives = 202/443 (45%), Gaps = 21/443 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQL 58 MK R + + ++ QG + IL +DKA L +GVL L Sbjct: 1 MKT---ARQITLDLLIRMDTQGAYSNIILDHAFTQNDADRRDKAFSAALFYGVLERRMTL 57 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGL 117 D+LI + V ++ +G YQLL+ +P AA+ E+V + KG Sbjct: 58 DYLIRYYSGIEFDKIKTAVVEILRMGFYQLLFMNSVPDSAAVNESVALCDYCNSTKAKGY 117 Query: 118 INGVLRQFQRQQEEL----LAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRP 172 +N +LR F R ++++ L Y P WL+K+ EQ ++ + RP Sbjct: 118 VNAILRTFLRNEKQIDYGNLTGEAKLSIEYSCPKWLVKKWNSELGEQRAMQMINSCFGRP 177 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P++ R+N ++ D + L+ G+ ++ + L + ++ G +QD Sbjct: 178 PIYARVNTVRYTVDDVIGELESEGISAAKNSLIDACIELANTKGIEQSSAYKKGMFHIQD 237 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLK 291 S+Q C AP E ++DLC+APGGKT E+ ++ + D+ + ++S + + K Sbjct: 238 ISSQICCKIAAPVFNETVVDLCSAPGGKTFTCAEIMNDRGRIYSYDLYDGKVSVIANTAK 297 Query: 292 RLGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG+ + D + + DR++ D PCS GVIRR P+IK+ + + + L Sbjct: 298 RLGLTIITAAENDATKFNPDIP--KADRVICDVPCSGLGVIRRKPEIKY-KPMKQLETLP 354 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-----GTPE 405 Q +I++ ++K GGTLVY+TC+V EN + FL+ +D G + Sbjct: 355 DTQRKIINNAAEYVKPGGTLVYSTCTVSRTENDDIVDEFLKEHSDFVPVVVPLNIKGLED 414 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 + LP GDGFF A L K Sbjct: 415 SYKRTMLPCDVNGDGFFTATLRK 437 >UniRef50_C0XM65 rRNA SAM-dependent methyltransferase RmsB n=3 Tax=Lactobacillus RepID=C0XM65_LACHI Length = 444 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 127/446 (28%), Positives = 222/446 (49%), Gaps = 20/446 (4%) Query: 1 MK-KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQ 57 MK + N R +A + + + G + + + + +SD DKAL + +GV++ Sbjct: 1 MKYQTNNPRELAVRTLLRT-SGGSYSNLQINAVIESTSMSDVDKALFTNIVYGVIQHRMT 59 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKG 116 L++ + + + + V L+ +YQL Y R+P A E+++ A ++ + Sbjct: 60 LEYQLVPFL-KDSEKTEDWVKELLYTAMYQLEYLDRVPKRAIFDESIKIAKSMGHDGTRR 118 Query: 117 LINGVL----RQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQR 171 + G+L R+ R+ +++ +Y P WL+ ++ +Q + ++ NQ Sbjct: 119 FVTGILHQMDRKGVREPDKIKDPVKKISIKYSVPEWLVSLIEGQLGKQKADQVFKSLNQT 178 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P +R N+ ++ L +AG + + + ++ V FE+G +T+Q Sbjct: 179 PKQSVRFNKAKTTKSKLTDQLTQAGFQTEDSLVAGEGIIVDKG-QVVHSAFFENGLLTIQ 237 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLK 291 D SA + ++ Q + ILD C+APGGKTT I +V+A+DI + +L V N K Sbjct: 238 DESAMLPVESMSIQPDDLILDACSAPGGKTTQIAANLKNGRVIALDIHQNKLKNVIRNAK 297 Query: 292 RLGMKATVKQG--DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 RLG+ V+ D R + ++ FD IL+DAPCS G++RR P+I++ + DI L Sbjct: 298 RLGVDGVVETQALDARKVDEKFSDEMFDHILVDAPCSGFGLMRRKPEIRYDKTLADINHL 357 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET------GT 403 +Q+Q +IL+A+ P +KTGGT+ Y+TC+++ +EN IK FL D ++ T T Sbjct: 358 SQIQLQILEAVAPKVKTGGTITYSTCTIVQQENQEVIKQFLDAHPDFQIEPTKTDLNLTT 417 Query: 404 PEQPGKQNLPGAEEGDGFFYAKLIKK 429 E P DGFF L++K Sbjct: 418 DENGMINIYPDDFGSDGFFVCSLVRK 443 >UniRef50_C5RAE2 RNA methyltransferase n=3 Tax=Lactobacillales RepID=C5RAE2_WEIPA Length = 456 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 132/445 (29%), Positives = 212/445 (47%), Gaps = 23/445 (5%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLI 62 N R+++ + +E+V + G + L + ++ +S+K+ L+ + +GV++ L++ + Sbjct: 15 TNPRALSVRVLEKV-QNGAYSNLQLDSMIKQADLSEKNVHLMTTMVYGVIQHRLTLEYWL 73 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + +P + V L+ + ++Q+ Y +IP HA E + A + + GV Sbjct: 74 IPFIKQP-QKLESWVRELLYISIFQMQYLDKIPDHAIFDEAINIAKRRGHDGTRKFVTGV 132 Query: 122 LRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWL 176 L QRQ E++ E + P WL++ L + SI N P + Sbjct: 133 LHAIQRQGLPDFEDIKDETKRLSIKTSLPLWLIETLNGQLGWPKTVSIASTINAAPSQSV 192 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 R+NR S + LL+ G + P PDA+ + V F DG +T+QD SA Sbjct: 193 RVNRELISPTDLIKLLENDGYQVTPSEVTPDALLVSGGH-VAGSQAFHDGLLTLQDESAM 251 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHIL---EVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 + L G+ +LD AAPGGKTT I E VVA+DI + + + +N RL Sbjct: 252 LMVPSLDVHPGDKVLDAAAAPGGKTTQIATYLEKTQGGHVVALDIHDHKAKLIKENATRL 311 Query: 294 GM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 + + + D R + ++ FDRIL+DAPCS G++RR P+I++ + +D +L + Sbjct: 312 QVADRIETQVLDARKVDEKFKDETFDRILVDAPCSGFGLLRRKPEIRYEKSLKDSYQLQK 371 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-------TP 404 +Q ILDA+ LK GG LVY TC++L EN I FL D +L T Sbjct: 372 IQLSILDAVANKLKKGGRLVYGTCTILSTENEDVINEFLAAHNDFKLVPTKTVNNLDVLD 431 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIKK 429 Q P DGFF A L+K+ Sbjct: 432 TQGMLHVYPDDFGSDGFFIATLVKQ 456 >UniRef50_C7RA09 Sun protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA09_KANKD Length = 443 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 185/433 (42%), Positives = 257/433 (59%), Gaps = 10/433 (2%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 + LR A A+ + +G+S +++L +Q + D +L + L G R +L+ + Sbjct: 11 NSQQLRQQACLALHAIAFEGRSANDVLNSIQFEQGS-DNSLFRALVLGSCRYFIRLESIA 69 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 +L+ +P K + + LI++GLYQL Y+R+P HAA++ETV +K+P L+NGVL Sbjct: 70 KQLLQKPFKPKDQDLLCLIIIGLYQLEYSRVPDHAAISETVSVCEQLKKPWATKLVNGVL 129 Query: 123 RQFQRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 R F RQQ ELL++ +++ D R+ P WL+ L+ Y Q +S++EA NQ+ PM LR+NR Sbjct: 130 RNFVRQQPELLSQADSNWDTRFAMPDWLISVLKPYYKGQMESLMEAINQQAPMTLRVNRQ 189 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 RD +L LL E G+ H A+ LE P V LP F DG+V+VQDA+AQ Sbjct: 190 RIGRDQYLELLLEQGLPASTHPIATSALVLEHPVSVEQLPHFSDGYVSVQDAAAQLAAGI 249 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 LAP +LD CAAPGGKT H+LE+ + A D+D +R R+ +NL RL + A + Sbjct: 250 LAPPPHSIVLDACAAPGGKTCHLLELCDSIALTACDVDHERCQRISENLLRLDLSAKLDC 309 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 D + FD ILLDAPCSATGVIRRHPDIK LR DI +L QLQ +IL+ +W Sbjct: 310 QDLTD--SNYPDNHFDAILLDAPCSATGVIRRHPDIKLLRHASDIDQLVQLQQQILEHLW 367 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG------TPEQPGKQNLPGA 415 LK GG L+YATCS+LP+EN QI FL+R DA+L + + G Q +PG Sbjct: 368 CKLKAGGRLLYATCSILPQENEQQITHFLERHKDAKLVSLSEQIQNLSHTKTGCQLIPGQ 427 Query: 416 EEGDGFFYAKLIK 428 DGF+YA L K Sbjct: 428 LSMDGFYYALLEK 440 >UniRef50_B3E3P1 Sun protein n=4 Tax=Desulfuromonadales RepID=B3E3P1_GEOLS Length = 464 Score = 432 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 149/443 (33%), Positives = 221/443 (49%), Gaps = 21/443 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 + R A ++++ +++ + + D+ L EL FGVLR LD + Sbjct: 17 SPRQAAYTTLQRLSGSDLHADDLIDQELSRNQLQGPDRGLFAELVFGVLRRQGTLDHYLK 76 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 +L+ +P+ + V L+ +GLYQL Y R+P HAA+ TVE I P+ KGLINGVL Sbjct: 77 QLVQQPLERLELPVLLLLRLGLYQLRYLDRVPSHAAVHATVELTNEI-LPRAKGLINGVL 135 Query: 123 RQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMW 175 R + R+QE L A A Y P WL ++ + + + + + A+ + PP+ Sbjct: 136 RSYLRRQESLTLPDPARQPAAWLAAAYSLPGWLAEQWLQQFSQNEAAGLAAASTEIPPLT 195 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 LR+N SR + L A + P P+ ++L + LPGF++G VQD ++ Sbjct: 196 LRVNTLRISRSALLERFHAAELAAEPCRFAPEGIQLLQRCQITGLPGFDEGLFMVQDEAS 255 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLG 294 Q LAPQ GE ILD+CAAPGGK TH+ ++ + A D++ +R+ R+ ++ +RLG Sbjct: 256 QLVAHLLAPQTGEQILDMCAAPGGKATHLAQLMNDRGCITATDLNARRIRRICESAQRLG 315 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + + S + QFDRILLDAPCS GVIRR+P+ KW +I A Q Sbjct: 316 LTSIQAVAADALTSDYLEGLQFDRILLDAPCSGLGVIRRNPEAKWRLTPAEISRCAARQH 375 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG---------TPE 405 ++DA LK G LVYATCS EE+ IK FL R + + Sbjct: 376 LLIDAAAARLKPAGVLVYATCSTAMEEDETVIKDFLSRHPEFVVENGAQFFPAWTDLFDC 435 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 + P DGFF A+L + Sbjct: 436 SGYLRAWPHRHGTDGFFAARLRR 458 >UniRef50_B0MGA0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MGA0_9FIRM Length = 448 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 115/446 (25%), Positives = 204/446 (45%), Gaps = 23/446 (5%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKV---SDKDKALLQELCFGVLRTLSQLDWL 61 +N R +A + ++ ++ + + +K KD+A LC G L +D++ Sbjct: 2 QNPRELALDVLMKIDKKEELSHIAIGETLEKYQFSEKKDRAFFTRLCQGTLERRLTIDYV 61 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLING 120 I+ + + V L+ +G Q+L+ IP AA E V+ A +L G +NG Sbjct: 62 IDLYSKTKVRKMKPLVRSLLRMGACQILFMDHIPDSAACNECVKLAKKRGFSKLSGFVNG 121 Query: 121 VLRQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPP 173 VLR RQ++E+ P W+++ ++Y E + ++IV + + Sbjct: 122 VLRTISRQKQEIPFPDRNKDFEKYLSVACSMPEWIIRHFLRSYSEAETETIVSSFLEPKK 181 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 + + SR+ +A L++ G K P+A+R+ + L F +G VQD Sbjct: 182 TTVSWMESSGSREELIASLEKDGAKVEDGKLLPEALRISHYDFLRRLTSFREGRFIVQDE 241 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKR 292 S+ P+ G+ ILD+C+APGGK + + + QV+A D+ E + + +N++R Sbjct: 242 SSMLAGKAADPKEGQKILDMCSAPGGKALYAADKLHGTGQVLARDLTEYKEELLKENIER 301 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 +G + Q + D +L D PCS G++ + DIK+ + + +L +L Sbjct: 302 VGFENIRTQIWDARIPDERLAESMDVVLCDVPCSGLGIMGKKQDIKYNLEESALEDLVKL 361 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG---------- 402 Q EIL ++K GG+L+++TC++ P+EN + L E + Sbjct: 362 QREILKTALTYVKPGGSLLFSTCTINPKENEENFRW-LAGQTGFEPEDLTPFLPETLDIK 420 Query: 403 TPEQPGKQNLPGAEEGDGFFYAKLIK 428 T ++ Q LPG DGFF KL + Sbjct: 421 TVKEGYIQLLPGIHPCDGFFIGKLRR 446 >UniRef50_B8KLT3 Ribosomal RNA small subunit methyltransferase B n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KLT3_9GAMM Length = 433 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 196/435 (45%), Positives = 260/435 (59%), Gaps = 8/435 (1%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK +R+ AA+ + +V+ +G SL L + +D+ L +E+CFG LR +LD Sbjct: 1 MKPGAAVRACAARIIAEVL-RGDSLDRALESHLTILPGRDQPLCREICFGTLRQYPRLDA 59 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L+ +L+ +P+ K R VH L + GLYQL RIP HAA++ TV+ A +K+ QL GL+N Sbjct: 60 LLGQLLQKPLRAKDRDVHALALAGLYQLTSMRIPAHAAVSATVDAATVLKKRQLSGLLNA 119 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLR+FQR++E LLA + + A HP WL L + +PE + I ANN PPM LR+N Sbjct: 120 VLRRFQREEEALLAALSDAQAS-AHPDWLWNALGQHWPEHREQIARANNSYPPMTLRVNL 178 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + RDS+L L +AG+ P P A+ LE V LPGF +G +VQD +AQ Sbjct: 179 SRVDRDSYLQQLADAGITAHPGRLSPAALTLEQAVDVTLLPGFAEGLCSVQDEAAQLAAQ 238 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 LAP+ GE ILD CAAPGGK+ HILE P +A + A+DI E+RL RV +NL RLG+ AT+ Sbjct: 239 LLAPRPGERILDACAAPGGKSCHILEQLPSDASLTAMDISEERLHRVQENLDRLGLAATL 298 Query: 300 KQGDGRYPS-QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 GDG +P FD +LLD PCSATGVIRRHPD+K LRR+ D A Q IL+ Sbjct: 299 IVGDGGHPPTALVDRGPFDAMLLDVPCSATGVIRRHPDVKVLRREEDAVSFAAQQRAILN 358 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE----QPGKQNLPG 414 +WP L GG L+Y TCS+LPEENS + FL R +DA G Q LP Sbjct: 359 GLWPLLAPGGRLLYVTCSLLPEENSQAVAEFLARQSDASEEALHVASAQACAQGLQLLPD 418 Query: 415 AEEGDGFFYAKLIKK 429 DG ++A L K+ Sbjct: 419 VSGTDGLYFAMLRKR 433 >UniRef50_Q03FY2 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Pediococcus RepID=Q03FY2_PEDPA Length = 444 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 131/445 (29%), Positives = 219/445 (49%), Gaps = 20/445 (4%) Query: 1 MKKQRN-LRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQ 57 M Q N R++A +E++ ++G + L + + D DK LL E+ +GVL+ Sbjct: 1 MTNQNNSARNLAVDILEKI-DEGSFSNIQLNQDIKSSSLIDIDKNLLTEIVYGVLQHRLT 59 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKG 116 LD+ + + +P R V L+ ++Q+ + R+P A E++E A ++ Sbjct: 60 LDFYLADYIRKP-EMTPRWVINLLRTAVFQMEFLDRVPDFAIFNESIEIAKLRGNDGIRK 118 Query: 117 LINGVLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQR 171 ++ GVLR +QR + + +Y W++ ++ E+ SI+++ NQ Sbjct: 119 MVTGVLRSYQRNGKPSFDSIKNPVEKLSTQYSVAPWIVDQMLYELGEEKCISILKSINQP 178 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 + +RINR + + + L+ A D +RL A + + DG +TVQ Sbjct: 179 SHLAVRINRWNKTHADIIKDLEYE-YTVTTSAIAKDGLRLSKGASISDTRSYIDGDLTVQ 237 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNL 290 D SA + + G+ +LD CAAPGGKTT I + +V DI ++R+ + DN Sbjct: 238 DESAMLVAETMHLEKGQKVLDACAAPGGKTTQIAAMIGETGEVTGWDIYQKRVQLIQDNA 297 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 +R+ ++ + + ++ FDRIL+DAPCS G++RR P+I++L+ +D +L Sbjct: 298 QRMHLENVKTEVQDAIAPREDLDESFDRILVDAPCSGIGLMRRKPEIRYLKSKKDSSDLH 357 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------ 404 QLQ +ILD I LK GG L Y+TC++L +EN I+ FL + E + T Sbjct: 358 QLQLKILDNIAKMLKVGGVLTYSTCTILRKENQETIEKFLAIHPEFEQLKVETAKKIKQN 417 Query: 405 -EQPGKQNLPGAEEGDGFFYAKLIK 428 ++ P E DGFF A L K Sbjct: 418 RDELSLNIYPDDFESDGFFIANLKK 442 >UniRef50_C5EIZ3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EIZ3_9FIRM Length = 447 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 121/439 (27%), Positives = 205/439 (46%), Gaps = 23/439 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R + + +V+++G + +L QK + D+A + + G L L Q+D +INK Sbjct: 13 RGIVLDILSEVLDKGSFVHLVLNQALQKYQYLDKSDRAFITRVTEGTLEYLLQIDHIINK 72 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + L+ + +YQ+LY R+P A E V+ A+ + LKG +NGVLR Sbjct: 73 YSRTKTDKMKPLIRNLLRMSVYQILYMDRVPDSAVCNEAVKLAVKRRFTGLKGFVNGVLR 132 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH 182 R++ L+ F++ Y P W+ +K Y + + I + + P W+R N + Sbjct: 133 TISREKASLV--FDSPSLAYSIPQWMYDMWEKEYGSAKAEMIAASFLEDRPTWVRCNLSR 190 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R++ L LD G+ P + + + L F++GW+ VQDA++ Sbjct: 191 ALREAILKSLDSQGVMVKELDCLPSVLAISGYDYMEGLECFQNGWIQVQDATSAFVGELA 250 Query: 243 APQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 P+ G++I+D+CAAPGGK+ H+ + V A D+ Q+ + + +N+ R G Sbjct: 251 DPKEGDYIIDVCAAPGGKSLHLADKMKGTGMVEARDLSYQKTALIEENVARSGAANIKAV 310 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 ++ D ++ D PCS G+I + PDIK+ + EL++LQ +IL +W Sbjct: 311 VWDALVPDEDAREKADIVIADLPCSGLGIIGKKPDIKYNMTMDKMRELSRLQRDILSVVW 370 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG------------K 409 ++K GGTLVY+TC++ P EN + L + G Sbjct: 371 QYVKPGGTLVYSTCTIDPMENEGNAMWLSENFP---LEPVDLSGRLGEDFDEPSLKDGRI 427 Query: 410 QNLPGAEEGDGFFYAKLIK 428 Q LPG DGFF + + Sbjct: 428 QFLPGIHPFDGFFISVFRR 446 >UniRef50_C3RII4 SUN protein n=10 Tax=Bacteria RepID=C3RII4_9MOLU Length = 417 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 120/431 (27%), Positives = 203/431 (47%), Gaps = 26/431 (6%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R+ A + + + L+ L +K +S DK L + +G ++ L++ + Sbjct: 2 ARTTALDVLIKYQNEQSYLNITLNDYLEKSLLSRNDKDLATRIVYGTIQNKLYLEYQLAP 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + ++++ LYQL++ ++P +A + E V A +N +LR Sbjct: 62 YIQG--KKIKNREKMILLMSLYQLIFLDKVPDYAVIDEAVRLAKKRDNF-AGKFVNAILR 118 Query: 124 QFQRQQE---ELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRIN 179 F R + + E HP W++K L K Y + I + +N P R+N Sbjct: 119 NFLRNGKCEIDEKDELKRISIETSHPLWIVKMLSKQYDLNIAKKICQHDNTPPTRAARVN 178 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 ++ L + + PD + L + F++G VT+QD S+Q Sbjct: 179 ILKTTKAQL---LTDENFEV--GNLSPDGL-LYRAGNIANTDYFKNGLVTIQDESSQLIA 232 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L PQ + +LD+C APG KTTH+ + +++A D+ E ++ V NLKRLG+ Sbjct: 233 PLLDPQPTDLVLDMCCAPGSKTTHLAAIMNNQGKIIAYDLFEHKIKLVEANLKRLGVNNV 292 Query: 299 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + GD + E+ FD+ILLDAPCS GV++R P+IK+ + + LQ+++L Sbjct: 293 ELHVGDATLLKEKYSEESFDKILLDAPCSGLGVMKRKPEIKYHDSGA-MDTIIPLQAKLL 351 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 D + LK G +VY+TC++ +EN IK FL + D ++ E K+ LP + Sbjct: 352 DNAYYLLKKNGKMVYSTCTINKKENEQMIKQFLDKYPDMKIIE-------EKKILPYVYD 404 Query: 418 GDGFFYAKLIK 428 DGF+ KL K Sbjct: 405 SDGFYMCKLEK 415 >UniRef50_B9ZKR1 Sun protein n=2 Tax=Chromatiales RepID=B9ZKR1_9GAMM Length = 451 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 191/435 (43%), Positives = 251/435 (57%), Gaps = 10/435 (2%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 R+ R A +A E VV QG SL+ + + ++ +D A +Q L + LR QL L+N Sbjct: 16 SRSPRQRALEAAEGVVLQGHSLTRAVEHATEGLNARDAAWVQALAYTTLRWYPQLSALVN 75 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + RP+ K + L+ GL +L++ HAA+ ET E A AI RP GLIN VLR Sbjct: 76 GFLERPLRKKDAVIGVLLAQGLAELMHFSTRDHAAVRETAELARAIHRPGAVGLINAVLR 135 Query: 124 QFQRQQEELLAEF-NASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 + QR+Q+ L A R+ P WLL+ ++ ++P+ W++++EA + PM LR+N + Sbjct: 136 RAQREQDALEAAVREDPALRFAVPEWLLETIRASWPDDWETLLEAATRPAPMTLRVNLSR 195 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 SR+ L L AG H A+ L+ PA V LPGF +G ++VQDASAQ L Sbjct: 196 TSREEALQALVAAGHPAQAHPQLEAALTLDEPADVAQLPGFAEGRLSVQDASAQWAAVLL 255 Query: 243 APQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 PQ GE +LD CAAPGGKT H+LE + Q+ A+D D +RL +V +NL RLG A + Sbjct: 256 DPQPGERVLDACAAPGGKTGHLLERAGGDLQLTALDSDAERLVQVRENLDRLGFAAQLTA 315 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 D P W + FD ILLD PCSATGVIRRHPDIK LRR DIP LA Q+ IL+A W Sbjct: 316 ADVADPDAWWDGRPFDAILLDVPCSATGVIRRHPDIKTLRRADDIPRLAAEQARILEAAW 375 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE-LCETGTPEQPGKQ------NLP- 413 L+ GG L+YATCS+L EEN + FL+R DA L G P G LP Sbjct: 376 GLLRPGGRLLYATCSLLSEENDAVVAGFLERMPDARALEPEGGPPIAGAHARSVGWALPL 435 Query: 414 GAEEGDGFFYAKLIK 428 G E GDGF+YA L K Sbjct: 436 GLEGGDGFYYALLTK 450 >UniRef50_A9KM96 Sun protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM96_CLOPH Length = 453 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 117/451 (25%), Positives = 208/451 (46%), Gaps = 28/451 (6%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLI 62 N R + ++ E ++ + +S +D+A + LC GVL +LD+ + Sbjct: 2 NAREIVLTMCLKINEDKLPSHVVINETLKNYKDLSKQDRAFISRLCLGVLEQKLRLDYDL 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGV 121 + + + + ++ + YQ+ + IP AA E V+ L G +NG+ Sbjct: 62 ERFSKIKVKKMKPVIRNVLRIAAYQIEFMEQIPDSAACDEAVKLVKKRGLGGLSGFVNGI 121 Query: 122 LRQFQRQQEEL-------LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 LR R+ ++ L E +Y P L++ K++ EQ + +++A + Sbjct: 122 LRNLSREFQKANGFDISKLNEIERLSYQYSMPKELVEFWLKSFRREQVEEMLQAFLEPKD 181 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 +RIN + + D + L + G++ A +A R+ + + L F+ G+ VQD Sbjct: 182 TSIRINESKITIDELVDNLVKDGVEVRDGAYLTNAKRITSYNSLPVLDSFQKGYFQVQDE 241 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-------PEAQVVAVDIDEQRLSRV 286 S+ + G++I+D+CAAPGGKT H ++ V A D +++++ + Sbjct: 242 SSMMVGLIAGIKAGDYIIDVCAAPGGKTLHAADLLLVAGGEKNPGHVDARDKTDRKVALI 301 Query: 287 YDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 NL+R+G + + +++ D IL D PCS GVI + PDIK+ + Sbjct: 302 EQNLERIGYQNVSVKVFDALVPDDSVKEKADIILADLPCSGLGVIGKKPDIKYNMTKEMM 361 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAF---LQRTADA------E 397 ELA+LQ IL + +LK GG L+++TC++ PEEN I+ L+ ++ E Sbjct: 362 SELAKLQRNILTVVVSYLKPGGVLIFSTCTINPEENEDNIRFITETLKLQPESIDTYLPE 421 Query: 398 LCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + T +Q Q LP DGFF ++ K Sbjct: 422 NLQCETSKQGYLQLLPNKSGVDGFFISRFRK 452 >UniRef50_A3MAA2 16S rRNA m5C967 SAM-dependent methyltransferase n=18 Tax=Acinetobacter RepID=A3MAA2_ACIBT Length = 434 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 173/427 (40%), Positives = 251/427 (58%), Gaps = 10/427 (2%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 NLR+ Q + +V +QGQSL++IL +V+++D+AL EL G LR L + L Sbjct: 12 NLRAQVVQTLLKV-QQGQSLASILNTQLNQVAERDRALFHELVLGTLRQWFALKSISLPL 70 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 +++P+ TV + VGLYQ+L TRI HAA++ETV+ + P L G++N +LR+ Sbjct: 71 LSKPLN--NETVETCLYVGLYQVLCTRIAAHAAISETVDATKQLGFPALSGIVNAILRRA 128 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSR 185 R+ E+ + + PSWL KRL+K + EQ +++ ++ Q P+ LR+N+ H R Sbjct: 129 TRETEDFEQGLQQA---HGLPSWLFKRLKKDWGEQTEALCQSLKQVAPLTLRVNQRHIGR 185 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 D++LA L ++ + LE + LPGFE GW +VQD AQ C T L Sbjct: 186 DAYLAKLQSLDIQARACLFSEAGIVLEQSVQITQLPGFEQGWFSVQDEHAQLCATLLPDL 245 Query: 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 N + ++D CAAPGGKT H+LE AQ++A+D D RL RV +NL RL + + + Sbjct: 246 NNKTVIDACAAPGGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHTEILAA 305 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 ++W Q D I+LDAPCSATGVIRRHPDI+ LR+ DI + +LQ +IL+ +W LK Sbjct: 306 DATKWNPVQPVDCIVLDAPCSATGVIRRHPDIRLLRQSSDIAQTIELQKQILEHMWQQLK 365 Query: 366 TGGTLVYATCSVLPEENSLQIKAFLQRTADAELC----ETGTPEQPGKQNLPGAEEGDGF 421 GGTL+Y TCS+L EN Q+ F DA+ + G + G+Q LP A+ GDGF Sbjct: 366 VGGTLLYITCSILKSENEQQMINFFTEHPDAKEVKIEADWGIEQVHGRQLLPEAQSGDGF 425 Query: 422 FYAKLIK 428 +Y K+ K Sbjct: 426 YYCKIQK 432 >UniRef50_B9XT31 Sun protein n=1 Tax=bacterium Ellin514 RepID=B9XT31_9BACT Length = 444 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 145/436 (33%), Positives = 222/436 (50%), Gaps = 24/436 (5%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A + + + + Q + N+L + +S D+ L QEL +G++R L+WLI++ Sbjct: 15 PRQIAVRVLTERLSQEEYTENLLEIELSRARLSAPDRGLCQELVYGIVRWQETLNWLIDR 74 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 ++ + L+ +GLYQ+ + RIP HAA+ ETVE A + G +N VLR Sbjct: 75 --KTEGRRQKPEMQVLLQLGLYQMFWLDRIPNHAAVHETVEIAKELGFVAQSGFVNAVLR 132 Query: 124 QFQRQQ---EELLAEFN--ASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 + R++ E+LL E Y HP W+ +R + Y E ++E NN + R Sbjct: 133 GYLRERVETEKLLEEVKIAQPQIGYSHPEWVYQRWLERYGAEHTAKLMEWNNTPARTYAR 192 Query: 178 INRTHHSRDSWLALLDEAGMKGFP--HADYPDAVR--LETPAPVHALPGFEDGWVTVQDA 233 IN A + G+K P + D + LE+ P+ L F+DG+ +QD Sbjct: 193 INTLKADAAKVTAQWETEGVKFIPRQYDWIEDGLIFELESHPPLAGLKSFKDGFFYIQDP 252 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKR 292 S + L + +LDLCAAPGGKTT I + + Q+VA DI + RL+ + +N R Sbjct: 253 STLLSVRELDVKAAHSVLDLCAAPGGKTTMIAQQMQNRGQIVAQDISDDRLALLRENYVR 312 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 LG+ V Q+FDR+L+DAPCS TGV+RR D++W + ++ L + Sbjct: 313 LGVTCVVASI-APNAVIANPAQRFDRVLIDAPCSNTGVMRRRVDLRWRIQPEEVERLRET 371 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412 Q E+L P LK G +VY+TCS+ PEENS ++ FL D EL + +Q Sbjct: 372 QLELLRRAAPRLKPNGIMVYSTCSLEPEENSQVVQQFLSENPDFEL-------KSERQLT 424 Query: 413 PGAEEGDGFFYAKLIK 428 P + DG + AKLI+ Sbjct: 425 PFGNDVDGAYTAKLIR 440 >UniRef50_UPI0001BC34B4 sun protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC34B4 Length = 443 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 107/445 (24%), Positives = 206/445 (46%), Gaps = 18/445 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M + N R++ A+ ++ E+ + +LP + +K + + D++ + G + Sbjct: 1 MNQNVNTRNIILDALIEINEKDRFTHIVLPEVLKKYQYLDNIDRSFISRTILGTVERKIT 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKG 116 LD++IN P+ + + ++ + YQL+Y + A E V ++ LKG Sbjct: 61 LDYIINLFSKTPVNKMKPVIRNILRMSTYQLIYMEGVKDFAVCNEAVRLSVKKGFTALKG 120 Query: 117 LINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMW 175 +NGVLR R++ ++ +Y P W++ + K Y ++ ++I++A + P+ Sbjct: 121 FVNGVLRTIAREKNKIEMP-QELWLKYSTPGWIVDKWLKEYGKENTEAILKAQYSKRPLT 179 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R N H +R+ + L ++ + A+ +E ++ L F +G VQD S+ Sbjct: 180 VRCNFNHCTREELVKRLTAENVRAKVIEEPDCALEIEGFDYLNKLNTFANGDFFVQDLSS 239 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG 294 + P+ +++DLCAAPGGK+ HI E V A D+ + ++ + +N+ RL Sbjct: 240 MMVCYAINPEKDSYVIDLCAAPGGKSLHIAEFMDNTGFVEARDVSDNKVMMINENIDRLN 299 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + ++ D ++ D PCS G++ + PDIK+ + EL++LQ Sbjct: 300 LCNIKAVVKDATVKWEDSVEKADVVIADLPCSGLGILNKKPDIKYHASEEKCHELSELQK 359 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG---------TPE 405 +ILD ++K GG ++TC++ EEN ++ L D L + + Sbjct: 360 KILDNSKEYVKHGGKFCFSTCTLNYEENMGNVEHILS-YGDYVLVDFEDRVPDNMKKYYK 418 Query: 406 QPGKQNLPGA-EEGDGFFYAKLIKK 429 + + +P DGFF A +K Sbjct: 419 KGILEIIPDENNNFDGFFIALFRRK 443 >UniRef50_C4FT85 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT85_9FIRM Length = 457 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 140/447 (31%), Positives = 217/447 (48%), Gaps = 25/447 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWL 61 + N+R A Q + ++ Q + +L + + D+ LL L +G ++ LD+ Sbjct: 12 KHNVRFQALQLLVEIDWHDQYSNVLLNRALSQSELKPVDQGLLVNLVYGSIQHRLTLDFY 71 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLING 120 + + + + L+ + YQ+LY RIP HAA+ E V A L GL+NG Sbjct: 72 LEPFIKG--KKLEPWIRSLLRMTAYQMLYLERIPDHAAINEAVNIAKLNGHAGLAGLVNG 129 Query: 121 VLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMW 175 VLR F+RQ+ + + A +Y W++ LQK Y + ++ + NQRP + Sbjct: 130 VLRNFRRQELRSLDSVTDPIEALSIQYSVAPWIVALLQKQYDQASLADLLASLNQRPRLT 189 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 RI + RD LA L AG + P A+ + P F+ G +T+QD S+ Sbjct: 190 ARIQAHPNERDQILAQLRAAGYQVEAGNLSPYAIE-SLDGRIIESPAFQAGRLTIQDESS 248 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM 295 P G+ +LD C+APGGK TH+ + + A+DI + +L V +++RLG+ Sbjct: 249 MLVAPIGRPVAGQRLLDACSAPGGKATHMAFLLQNGHLDALDISQAKLDLVAGHMERLGL 308 Query: 296 KAT---VKQGDGRYPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 + +D I LDAPCS G++RR P+IK+ ++ DI L+ Sbjct: 309 SQQEGLTISLHATDALDFMPPSGTLYDIIYLDAPCSGLGLMRRKPEIKYTKQASDIEALS 368 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG-- 408 LQS++LD + LK GGTLVY+TC++ EN Q+KAFL R +D +L G E G Sbjct: 369 MLQSQLLDHVASLLKPGGTLVYSTCTLAQAENQDQVKAFLARQSDFQLSPIGPEEVQGAS 428 Query: 409 -------KQNLPGAEEGDGFFYAKLIK 428 + LP DGFF A++ K Sbjct: 429 VLTADGMIEVLPQDYLTDGFFIARMTK 455 >UniRef50_Q03W17 tRNA and rRNA cytosine-C5-methylase n=11 Tax=Lactobacillales RepID=Q03W17_LEUMM Length = 448 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 117/445 (26%), Positives = 205/445 (46%), Gaps = 24/445 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWL 61 N R +A Q + ++ + G + L + + K+ + D LL L +GV++ ++ Sbjct: 8 SDNPRVLAVQTLAKI-KNGAYSNLQLNQVIKQHKLGEADTRLLTTLVYGVIQHRLTFEYW 66 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLING 120 + + V L+ ++Q+ Y +IP HA E++E A + + Sbjct: 67 LEPFVGS--KKIDPWVRELLYTAIFQMEYLDKIPQHAIFNESIEVAKILGHVGTGKFVTA 124 Query: 121 VLRQFQRQQ----EELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMW 175 +L R+ ++ + P WL++ L K ++ + I+ N P Sbjct: 125 ILHNISRKGLRSVADIGDDIQRLSIEASLPVWLVEELIKQNGDERARQIIATINDAPKQS 184 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R+N + + L+ + A + V + + DGW+T+QD SA Sbjct: 185 IRVNTLLATDQEVVTALESENFTITASSVAAHAFLVSGGH-VASSKAYHDGWLTLQDESA 243 Query: 236 QGCMTWLAPQNGEH-ILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRL 293 + L ILD AAPGGKTT + + AP+A + A+D+ E ++ + +N +RL Sbjct: 244 MLPVESLHLTPEVKSILDAAAAPGGKTTQLAQYSAPDAVITALDVHEHKIKLINNNAERL 303 Query: 294 GM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 + K + D R + + +FDRIL+DAPCS G++RR P+I++ + D+ LA+ Sbjct: 304 HVADKIHARVLDARKVPEQIDK-KFDRILVDAPCSGFGLLRRKPEIRYDKTLEDVESLAR 362 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------- 404 LQ++ILD++ +L G +VY+TC++L +EN + FL+ + EL T T Sbjct: 363 LQTQILDSVSQNLAKNGIMVYSTCTILRQENDDVVTNFLEDHPNFELIPTETTYKLKLDH 422 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIKK 429 + P DGFF A L K Sbjct: 423 GEKALHVYPDDYHTDGFFVATLRKN 447 >UniRef50_A8SLL0 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLL0_9FIRM Length = 434 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 118/431 (27%), Positives = 209/431 (48%), Gaps = 10/431 (2%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R +A + + ++ ++ + +N+L + +SD D L+E+ +G L LD++I KL Sbjct: 2 RKLAIEILCEIKDENSNSTNLLNKSTKNISDLDSKFLREIVYGTLENRIYLDYIIKKLCK 61 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 + + ++ + +YQ+++ +IP A + E V K + +NG LR F Sbjct: 62 LRIKKFNPYILNILRISIYQIIFMDKIPEFAIINEAVNLTKVFKLKKFSSFVNGSLRNFL 121 Query: 127 RQQEELL-----AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINR 180 R +E+ + +E A +Y ++K L Y E+ I+E + +P +RI+ Sbjct: 122 RNKEDFMKIKVESEEEAISIKYSANMDIVKLLLGDYGREETIKILENSMTKPHFAIRISS 181 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + + + L++ G K +E P + F+ G TVQD + Sbjct: 182 FEKTEEKVVKDLEKDGYKLKKSEISKLTYFVENPTNILETESFKSGDFTVQDVGSILTGE 241 Query: 241 WLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 LAP+ +LD+C+APGGKT H+ ++ ++ A DI + +L ++ +N KRL ++ Sbjct: 242 ILAPKENSKVLDICSAPGGKTCHLAFQMKNSGEIFANDIVKSKLKKIEENCKRLNVQNVK 301 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 + ++QF IL D CS GV+ R P+IK R I E+ +LQ +I D Sbjct: 302 LLNFDASIYKEEYKEQFGYILCDVICSGIGVMDRKPEIKLFRSQETIDEIIELQRKIFDN 361 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL--CETGTPEQPGKQNLPGAEE 417 +LK G +VY+TCSVL EN +K FL++ + ++ E + + LP ++ Sbjct: 362 AVEYLKDKGEIVYSTCSVLKCENEENVKYFLEKHKNLKIKDVEFLGKSEKFIKLLPEKQK 421 Query: 418 GDGFFYAKLIK 428 +GFF K +K Sbjct: 422 HNGFFIIKFVK 432 >UniRef50_D0MH27 Sun protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MH27_RHOM4 Length = 453 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 132/443 (29%), Positives = 218/443 (49%), Gaps = 16/443 (3%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ-QKVSDKDKALLQELCFGVLRTLSQLDW 60 K+ R A + +E++ ++ ++ ++ + E GV R LD+ Sbjct: 9 KRLDPARREAVRLLERIENDQAYVNRLMSAGLTDELEPEAGRRATEYVAGVTRWRRWLDF 68 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L+ + + + ++ +GLY+LL+T PP+AAL E VE A + RPQ ++N Sbjct: 69 LLAQNYRGRYDSMEPRLRQILRLGLYELLFTDTPPYAALNEAVELARRLVRPQAGAVVNA 128 Query: 121 VLRQFQRQQEELL-----AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 VLR RQ++ L RY HP+W+++R Y ++++ NN+RP Sbjct: 129 VLRSLLRQRDFLPQPQTGDPVEDLAIRYSHPTWIVQRWLARYGPADTEALLRYNNERPWF 188 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 +R+ SR L L + G++ P D +R++ P+ E G + VQD S Sbjct: 189 GVRVRTDRISRHVVLHRLADRGLEAEPSPVLDDFIRVQRLGPLLEDRLIEKGLLAVQDES 248 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRL 293 A + L P E I+D CAAPGGKTT+I + +V+A D+ +R + + Sbjct: 249 AGLAVRLLDPHPDETIVDACAAPGGKTTYIATRMRDHGRVLAFDVHPKRTELIRRAALQQ 308 Query: 294 GMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 G+ + V + D R S+ E Q DR+LLD PCS GV+ + D++W RR ++ EL +L Sbjct: 309 GLTSIVAEALDLRQVSERYPELQADRVLLDVPCSGLGVLAKRADLRWHRRPEELDELVRL 368 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-------TPE 405 Q E+L+A ++ GG LVY+TC++ PEEN +++AFL R + + + Sbjct: 369 QDELLEAAARLMRPGGILVYSTCTIEPEENEARVRAFLARHPEFTVERADAWVPAEMVTD 428 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 + P + DG F A+L + Sbjct: 429 EGFFATWPPRDRMDGAFAARLRR 451 >UniRef50_Q1DCG5 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Cystobacterineae RepID=Q1DCG5_MYXXD Length = 438 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 134/439 (30%), Positives = 213/439 (48%), Gaps = 20/439 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKV---SDKDKALLQELCFGVLRTLSQLDWLI 62 N R++A Q + +V L+ +L + +D AL+ EL +G R LD+ I Sbjct: 2 NARALAIQVLARVRATDAYLNVVLDTQLSESPPKDPRDAALVTELTYGATRRQLALDYAI 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + R + + V + +G YQ+ +TR+P AA+AETV+ + + G N +L Sbjct: 62 TRFADRKLDALEDKVLAALRIGAYQIFHTRVPARAAVAETVQALKEVGLTRAAGFTNAIL 121 Query: 123 RQFQRQQEELLAEFNA----SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 R+ L + R HP WL++R + + E+ ++++ A+NQ P + +R Sbjct: 122 RKLAALPAPPLPPASDVALHLSVRESHPQWLVERWLRQFGRERAEAMLVADNQAPAVVVR 181 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 N +RD+ LA L E G+ P + L + V + G+ +G VQD +AQ Sbjct: 182 ANTAKVTRDALLAQLQEMGVDAKATTVSPVGITLPSVGRVEDVYGYAEGLWQVQDEAAQL 241 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 + A +LD CAAPGGK+ H + VVAVD+ +L ++ +RLG++ Sbjct: 242 VGVYGAIPETARVLDACAAPGGKSCHQAQ---SHDVVAVDLHAHKLRKIEAEARRLGLQP 298 Query: 298 TV--KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 + D P + F L+DAPCS G +RRHP++++ R++ DI LA LQ Sbjct: 299 RLKAYAHDAAEPFPEEWGE-FHAFLVDAPCSGLGTLRRHPELRYRRKEEDISRLATLQRR 357 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE------QPGK 409 IL+ + GG LVYA C++ P+E Q++ FL+ + P Q Sbjct: 358 ILENCQDAVPPGGLLVYAVCTMEPQEGQDQVEMFLRSHPEWTAEPPVLPGLKLPMSQAYL 417 Query: 410 QNLPGAEEGDGFFYAKLIK 428 + LPG E DGFF A+L K Sbjct: 418 RTLPGPEGFDGFFAARLRK 436 >UniRef50_A4XL79 Sun protein n=2 Tax=Clostridia RepID=A4XL79_CALS8 Length = 433 Score = 422 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 123/443 (27%), Positives = 208/443 (46%), Gaps = 29/443 (6%) Query: 1 MKKQRNLRSMAAQAVEQVV-EQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQL 58 MK N R A + ++ + + ++ K+ +D+AL EL GVLR + L Sbjct: 1 MK--INTRRAAFLVIFEIESRKNVNADALMEKYHHKLKKTEDRALFVELVHGVLRYKNIL 58 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGL 117 D+ IN + + + + + ++ + Y+LL+ +IP +A + E E A + + Q K Sbjct: 59 DYYINFVAKKGVK--DKKILNILRIATYELLFLDKIPDYATVNEACELAKNVNKNQ-KDF 115 Query: 118 INGVLRQFQRQQEELLAEFNA---------SDARYLHPSWLLKRLQKAYP-EQWQSIVEA 167 +N +LR R+++E+ + +P +L+ L+K+Y ++ I+E Sbjct: 116 VNAILRNIIRRKDEIEKALERVKEVNIKDFLSIKLSYPKFLIDYLEKSYGFDKTVKILEF 175 Query: 168 NNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGW 227 N +P ++IN S+ +L L+ G + + + + + DG+ Sbjct: 176 LNTKPLQSIKINTKKISQAEFLKKLEACGYEY-KVPELNREIVYIVKGNIKESELYRDGY 234 Query: 228 VTVQDASAQGCMTW--LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSR 285 QD ++ + W + ILDLCAAPGGKT + EV VV+ D+++ ++ R Sbjct: 235 FYYQDLASSFIVKWNRDDFEKASSILDLCAAPGGKTFNCAEVT-RGFVVSCDVNKSKIER 293 Query: 286 VYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 + +NL RLG V + +FD ++ D PCS G IR+ PDIKW + D Sbjct: 294 LRENLLRLGFDNVVVAENDALTLNEDFVGKFDIVIADLPCSGFGTIRKKPDIKWNKTKED 353 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE 405 I L +LQ ++LD +LK GG + Y+TC++ EN + FL++ D L T Sbjct: 354 IENLHELQLKMLDNAAQYLKEGGIIFYSTCTLGHRENEDTVLKFLEKHKDFSLISQNT-- 411 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 P + DGFF AKL K Sbjct: 412 -----IFPDEYKCDGFFIAKLKK 429 >UniRef50_A4BP82 Fmu, rRNA SAM-dependent methyltransferase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BP82_9GAMM Length = 423 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 197/422 (46%), Positives = 266/422 (63%), Gaps = 7/422 (1%) Query: 13 QAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 Q ++ V+ G++L N L + +D+AL QELC+GVLR S+L+ L+ L+ + Sbjct: 2 QTLQDVLAHGRTLPNALADSVAALQDSRDRALCQELCYGVLRWHSRLEALVLNLLEQRPR 61 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEE 131 + R + L+ +GLYQL+YT+IPPHAA++ TV+ A A+ + G +N VLR+FQR++ Sbjct: 62 NRDRDLTLLLELGLYQLMYTQIPPHAAVSATVDTARALGKSWAAGWVNAVLRRFQRERAN 121 Query: 132 LLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 L + A R+ P WLL+ L+ +P WQS+V+A+N R P+ +RINR RD+WLA Sbjct: 122 RLQAVDLDCATRHAMPPWLLQWLRADWPSDWQSLVQASNARAPLTVRINRRRRDRDAWLA 181 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 L + G + P A+ L PV LPGF DG V+VQDA+AQ LA + + + Sbjct: 182 QLSAVSLTGAHLTELPQAIMLSRALPVTELPGFADGEVSVQDAAAQFAAMLLALRPKQRV 241 Query: 251 LDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 LD CAAPGGKTTHILE A E + A+DID QRL+RV +NL RLG++A + GD P+ W Sbjct: 242 LDACAAPGGKTTHILEQA-EVTLTALDIDAQRLTRVAENLARLGLQANLLVGDATDPASW 300 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 FDRIL+DAPCS TGVIRRHPDIKWLRR D+P LA Q +L+ +WP L +GG L Sbjct: 301 WDGLTFDRILVDAPCSGTGVIRRHPDIKWLRRPSDLPALAATQQRLLNRLWPLLSSGGRL 360 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDGFFYAKL 426 +YATCSVL EN I++FL+ DA + G Q G Q LPG + DGF+YA L Sbjct: 361 IYATCSVLRAENDAVIESFLRGHGDALVRAPDIPLGRALQFGHQILPGERDMDGFYYACL 420 Query: 427 IK 428 K Sbjct: 421 EK 422 >UniRef50_A8PKU4 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Rickettsiella grylli RepID=A8PKU4_9COXI Length = 442 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 182/433 (42%), Positives = 260/433 (60%), Gaps = 10/433 (2%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNIL-PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R +AA + + +++ +L+ IL + + +D+A +QELC+GV+R L L + Sbjct: 2 SNTRRIAAHIISRFLKKKIALNTILFAEVPSGIDVRDRAFIQELCYGVIRWYFPLKKLSS 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+ + + + ++ L++VGLYQL Y I PHAA+ ETV+ A +++ LINGVLR Sbjct: 62 FLLKKSLNRSDQDIYALVLVGLYQLNYLNISPHAAVYETVQAAKELRKRWAAPLINGVLR 121 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 FQRQ+ LL + + HP WL+K+LQ A+P W+SI++ANN M LR+N+ Sbjct: 122 SFQRQKTGLLKKVSQI-THLAHPDWLIKKLQHAWPNAWRSILDANNHLASMSLRVNQLEI 180 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 +R+S+L L+ + + L+T PV LPGF G +++Q+ SAQ + L Sbjct: 181 TRESYLQKLNNNNINATLSELSQSGIILDTSFPVDKLPGFRTGEISIQNISAQLSASLLL 240 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ- 301 ++G+H+LD CAAPGGKTTHILE PE A VAVD D RL+R+ DNLKRL + Q Sbjct: 241 LEDGQHVLDACAAPGGKTTHILETQPELACCVAVDADVVRLTRLKDNLKRLKLTEKKIQL 300 Query: 302 --GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 + + + FDRILLD+PCS TGVIR+HPDIK LRR++D+ +LA Q ++L + Sbjct: 301 FPMKVQDFKIFWKGRMFDRILLDSPCSGTGVIRKHPDIKLLRREKDVIQLADQQYQLLSS 360 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----LCETGTPEQPGKQNLPGA 415 +W LK GG L+Y TCSVLPEEN+ +K FL DA G G+Q LP Sbjct: 361 LWGLLKPGGILLYVTCSVLPEENANVLKRFLTHHFDAREEVIRETWGLACPIGRQILPEI 420 Query: 416 EEGDGFFYAKLIK 428 DGF+YA+L K Sbjct: 421 HGADGFYYARLRK 433 >UniRef50_Q87AR1 Ribosomal RNA small subunit methyltransferase B n=20 Tax=Gammaproteobacteria RepID=RSMB_XYLFT Length = 431 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 175/433 (40%), Positives = 252/433 (58%), Gaps = 11/433 (2%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSD-KDKALLQELCFGVLRTLSQLD 59 M R +AA+ + VV+QG+SL L + D +D+AL++ +CF VLR + Sbjct: 1 MSDGIAPRVVAARVLALVVDQGRSLKTELAAALPTLEDVRDRALVEAICFAVLRRRPVYE 60 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 + + +ARP+ + L+MVG QL ++PP+AAL+ TV+ + P +N Sbjct: 61 AALTRWLARPLGRGDAQLRGLLMVGFAQLDVLKVPPYAALSATVDACRVLGWPHRVSFVN 120 Query: 120 GVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRIN 179 VLR+ QR++ +++ A P WL +R++ + EQ ++I +A+ + PMWLR+N Sbjct: 121 AVLRRAQRERLPVVSSDAA------WPRWLAERIRADWGEQAEAIFDASLKPAPMWLRVN 174 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 + R +++ L AG++ P P+A+ L+ PV LPGF+ G V+VQD SAQ Sbjct: 175 LRYGDRHTYVQRLQAAGLEAVPSGLVPEALALDCSVPVVQLPGFQGGEVSVQDLSAQQVA 234 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L+P +LD CAAPGGK H+LE AP + A+D+D QRL RV + R+ +KA + Sbjct: 235 ALLSPAPHARLLDACAAPGGKAAHLLERAPTLCLTALDVDMQRLRRVAETCDRIHVKARL 294 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 D + W + FD +LLDAPCSATGV+RR PD+ RR D+ L +QS +LDA Sbjct: 295 CVADATDLAAWWDGEPFDAVLLDAPCSATGVVRRQPDVLLHRRAEDLLPLLNIQSRLLDA 354 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGA 415 W L+ GG LVY TCSVL EN Q++AFL RTADA + G P G+Q LPG Sbjct: 355 CWRTLRPGGVLVYVTCSVLRAENQTQLEAFLARTADACAEDPGDAYGQPAGLGRQRLPGE 414 Query: 416 EEGDGFFYAKLIK 428 + GDGFFYA+LIK Sbjct: 415 QGGDGFFYARLIK 427 >UniRef50_B3QZ49 Sun protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QZ49_CHLT3 Length = 443 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 130/451 (28%), Positives = 209/451 (46%), Gaps = 32/451 (7%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQL 58 MK R +A QA+ +V L + D+A ++ +G LR ++ Sbjct: 2 MK----AREIAVQALREVEVNHAKSDTALNHFFSITALEPVDRAFTMQIVYGTLREKMKI 57 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGL 117 D +I + V ++ +G YQLL+ ++P AA+ E+VE A +K L L Sbjct: 58 DHVIKQFYRHDYDKMDIDVKNILRIGAYQLLFLSKVPRWAAVNESVELAKKLKGQFLGNL 117 Query: 118 INGVLRQFQRQQEELLAEF------NASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 +NGVLR E + + +Y HP WLL+R Y + Q+I+EANN Sbjct: 118 VNGVLRNISNNLESVDFSIQGGTFADQIALKYSHPRWLLERWISTYGFLEAQNIMEANNL 177 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P + RINR ++ + + L + PD V + + P G V+V Sbjct: 178 IPRIAFRINRLKNAPEKFQQKLLAENVTFRKS-ILPDFVIPDRFFDLE--PFLSTGEVSV 234 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 Q + L PQ G+ +LD+CAAPGGK+T++ E+ Q+ ++D+ + +L + Sbjct: 235 QSEAQALACRLLNPQPGQKVLDMCAAPGGKSTYLAEMMANAGQITSLDLYDNKLEDIDRL 294 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 LG+ + D S E+ FD ILLDAPC+ TGV+ R +++W + D+ Sbjct: 295 ASALGIDIISTIKHDATRFSH---EEGFDAILLDAPCTGTGVLSRRAELRWRLSEADLAA 351 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET------- 401 L+ LQ ++L+ K +VY+TCS+ PEEN + I+ FL + +L Sbjct: 352 LSNLQYQLLENAAKMAKPDAAIVYSTCSIEPEENQVLIEKFLNAHPEWQLQSAIEILPDE 411 Query: 402 ---GTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 ++ LPG DG F A+L++K Sbjct: 412 FHEVVHDKGYISLLPGKNGFDGAFSARLVRK 442 >UniRef50_D1PM68 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM68_9FIRM Length = 437 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 110/438 (25%), Positives = 190/438 (43%), Gaps = 20/438 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK----VSDKDKALLQELCFGVLRTLSQLDWL 61 R +A +A+ + G + +L +K + +D A + + VL LD+L Sbjct: 2 TPRRLAVKALLHQEQAG-YANLVLDAELKKCTPPLEGRDAAFAARIFYTVLEYQPLLDFL 60 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 +++ +P+ V ++ GL Q + +P AA+ E+V+ A+ + G++N V Sbjct: 61 LDRFSKKPVARLDAPVRAILRAGLAQARFMEVPLPAAVNESVKLTKAMGKTSAAGMVNAV 120 Query: 122 LRQFQRQQ---EELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRI 178 LR+ ++ + L + Y E+ + A RP +R+ Sbjct: 121 LRRAAVYPVKEKDFADPLERLQIYDCLSRPVAALLYQEYGEETFDLAAAFRNRPVSAVRV 180 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N + ++ + L G P P A+ +E A F +G VQ ++Q Sbjct: 181 NTLRTTDEALIQALQAEGHTVRPGPW-PHALLVEFQGSPAAGNSFAEGHYHVQGLASQFA 239 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 LA + G+ +LDLCAAPGGK+ + E+ ++++ ++ R+S + +R G++ Sbjct: 240 ALSLAVRPGQKVLDLCAAPGGKSLTLAEEMQNTGELISGEVLPGRVSLIQKAFERCGIRC 299 Query: 298 T-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 Q D P + FDR+L D PCS GVI + PDI++ + + L +Q +I Sbjct: 300 ARAVQNDATVPRKEW--GTFDRVLCDVPCSGLGVIAKKPDIRY-KDLDGMENLCAIQQKI 356 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP------EQPGKQ 410 L L G LVY+TC++ +EN Q++ FL + + G Sbjct: 357 LQNGADSLAENGRLVYSTCTINVQENQKQVENFLCDHPEFRVVAPELTLPGMEQGPFGTL 416 Query: 411 NLPGAEEGDGFFYAKLIK 428 LP DGFF A L K Sbjct: 417 FLPHKTGTDGFFVAILEK 434 >UniRef50_D1VSE3 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE3_9FIRM Length = 430 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 123/431 (28%), Positives = 201/431 (46%), Gaps = 11/431 (2%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPL-QQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R A ++ V +G L L + Q +SD+D ++ + GV+R + LD++I Sbjct: 2 NNIRQKALFIIDNVYNKGAFLEEQLNIIKQSNISDRDFTFIKNITTGVIRNRTYLDYVIK 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + ++ + +YQ + +IP ++ + E+V+ A +N +L Sbjct: 62 INSKIRFKKIHKIIAIILEMAIYQYYFLDKIPNYSIVDESVKLAKLYGNKGSSSFVNAIL 121 Query: 123 RQF---QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQS-IVEANNQRPPMWLRI 178 R ++ ++ Y HP + K + Y + +++ANNQ P +R+ Sbjct: 122 RNIVSKDKEVVKIEDSIENLSVYYSHPKFYTKYFYENYGVELTKNLLKANNQEPDFVIRV 181 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N +D LL + PD++ +E P + F +G+ QD S+ Sbjct: 182 NTLKTKKDHLYKLLKDENFNVI-DGLVPDSLIIENPKNIFDTQAFREGFFYAQDFSSIKV 240 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 L P+ ILDLCAAPGGK+TH+ + Q+VA D +L + DN KRLG+ Sbjct: 241 SQILNPKKNSTILDLCAAPGGKSTHLGAILENTGQIVACDKSLYKLDLIKDNAKRLGVSN 300 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + E +FD L+DAPCSA G+ R+ PDIKW R DI LAQ+Q I+ Sbjct: 301 IKVSINDASKYNNDFEDKFDYCLVDAPCSAIGLYRKKPDIKWNRSLEDIKNLAQIQKNII 360 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 + ++K GG L+Y+TCS+ EN IK FL R + ++ + + P + Sbjct: 361 NNAGRYVKKGGVLIYSTCSLSYSENEGVIKEFLDRNKNYKIL--TIEGKDILKLFPF-DN 417 Query: 418 GDGFFYAKLIK 428 DGF KL + Sbjct: 418 YDGFSICKLQR 428 >UniRef50_A0LDW0 Sun protein n=2 Tax=cellular organisms RepID=A0LDW0_MAGSM Length = 452 Score = 419 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 146/450 (32%), Positives = 224/450 (49%), Gaps = 27/450 (6%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQL 58 K + R+MAA AV ++ + L L Q S + + E+ G +R ++ L Sbjct: 3 KSHVSERTMAAAAVSAMLSEHLPLETALEQQIHQQSGTSPEMRGRAHEIVVGTIRHMALL 62 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGL 117 + + + M + + K V +++ LYQ + R P H+A+ E V+ R L G Sbjct: 63 EATLTRFMQKDLKAKHHYVRAVLLTALYQAQFMRTPIHSAVDEAVKLVKQQPRDHNLSGF 122 Query: 118 INGVLRQ-----FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 +N VLR+ + RY HP WL+KR +K E ++ + A N + Sbjct: 123 VNAVLRRSTEVELSTTWSAVKDPLKRLATRYSHPLWLVKRWEKRLGMEATEARLAAANAQ 182 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P+ LRI+ + +LA +A ++ + + + L A V LPG+ +GW VQ Sbjct: 183 APLTLRIHTPKVTVADYLAAAKQAEIEVTVCPEAEETLMLPQGAKVATLPGYSNGWFAVQ 242 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVV-AVDIDEQRLSRVYDNL 290 D +AQ LAPQ GE ILD CAAPGGK+ H++ + V+ A+D +QRL R+ +N+ Sbjct: 243 DRAAQAVARLLAPQAGEAILDACAAPGGKSAHLVALGGAGVVITALDSAQQRLERMGENM 302 Query: 291 KRLGMKATV--KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 RLG+++ V + D P + FDR L+DAPC+ TGVIRRHPDIKW R + E Sbjct: 303 ARLGIRSQVKLRCADATQPIE----GLFDRALVDAPCTGTGVIRRHPDIKWRRNPSGLAE 358 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----------L 398 + + Q +IL ++ +K GG LVYATCS+ P+EN Q+ FL+ + + Sbjct: 359 VVKQQQQILQSVAAAVKPGGLLVYATCSLEPDENEQQVARFLKEHPQWKRLPLEAGMAGI 418 Query: 399 CETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + P DGF+ A+LIK Sbjct: 419 LPEWIDSAGDLRTEPATHGVDGFYAARLIK 448 >UniRef50_A0Z2Z6 Sun protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z2Z6_9GAMM Length = 438 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 166/413 (40%), Positives = 234/413 (56%), Gaps = 6/413 (1%) Query: 21 QGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYL 80 G+SL LP + +S +++ L+QEL +G LR +L+ + +L+ +P K V L Sbjct: 20 NGESLVRALPKGLEPLSLENRPLVQELVYGTLREWPRLEGIALQLLRKPPRAKDADVLCL 79 Query: 81 IMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASD 140 I+ G++QL +P HAA+ ETVE A ++ + GLING LR +QRQ+ L + Sbjct: 80 ILTGIHQLSGLNVPSHAAVGETVEAAKSLGKSWAAGLINGCLRNYQRQKGALEDQL-TES 138 Query: 141 ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGF 200 P WL + + K +P+Q I A+ + PPM LR+N SR +++ L A + Sbjct: 139 QSNALPDWLWQAICKQWPDQASEIAGASREHPPMTLRVNLQRGSRADYVSTLQNADIPVA 198 Query: 201 PHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGK 260 + A+ L+TP PV ++PGF +GW +VQDASAQ +L P N E I D CAAPGGK Sbjct: 199 INPHIATAITLQTPRPVSSIPGFLEGWSSVQDASAQLAAQFLQPNNDESIFDACAAPGGK 258 Query: 261 TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRIL 320 T H+LE AP+A+V+A DI +QRL + +N RL + VK D S G +QFD IL Sbjct: 259 TCHVLECAPKAKVLAADISDQRLESLQENSTRLNLPLDVKVVDATQASVTLGPRQFDAIL 318 Query: 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE 380 D PCSATGVIRR+PDIK R+ DI Q Q +IL+ +WP +K GG L+Y TCS+L Sbjct: 319 ADVPCSATGVIRRNPDIKITRKAADIATFHQQQRDILEGLWPLVKPGGRLLYVTCSLLEA 378 Query: 381 ENSLQIKAFLQRTADAELCETGTP-----EQPGKQNLPGAEEGDGFFYAKLIK 428 EN I+A + E+ + G Q LP GDG +++ L K Sbjct: 379 ENDNVIEAAQSQLPQCEVMPLAGGTLRFNTRFGLQTLPTLNNGDGLYFSLLKK 431 >UniRef50_C6P2V1 Sun protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2V1_9PROT Length = 424 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 172/423 (40%), Positives = 245/423 (57%), Gaps = 11/423 (2%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 AA+AV +VV G++L+ +L +K ++ ++K LQ+LC+G LR S+L ++++ L+ Sbjct: 8 AAKAVHKVVHGGRNLTQVLSETLRKESKLTAQEKGALQDLCYGTLRYYSRLAYMLDSLLQ 67 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 RP+ + + L+MV +YQL +T+ H + + V A P GL+N VLR + R Sbjct: 68 RPVR--EPLLGSLLMVAIYQLEHTKAGKHVIVDQAVHAAKNTN-PAASGLVNAVLRNYLR 124 Query: 128 QQEELLAEF-NASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 +Q L ++ Y + W + L+ Y EQ I++A N+ PPM LR+N H + Sbjct: 125 RQSVLREAANQKEESHYAYRQWWINALKAQYGEQAAEIMQAGNRHPPMTLRVNARHTTAP 184 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 + +L + PDA+ LE P PV LP F +GWV+VQDA AQ +L + Sbjct: 185 GYQTVLAAQDIAAQIVE--PDALILECPVPVEKLPKFNEGWVSVQDAGAQYAAHFLDVHD 242 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 G +LD CAAPGGKT H+LE+A + +++AVD DE RL RV +NL+RL + A V GD Sbjct: 243 GMRVLDACAAPGGKTAHLLELA-DIELLAVDKDELRLGRVRENLQRLKLDAQVVCGDAAS 301 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 P W + F+RIL D PCSA+GV+RRHPDIKWLRR DI A Q+++L+++W L + Sbjct: 302 PEDWWDGKAFERILADVPCSASGVVRRHPDIKWLRRQEDIANFAVQQAQVLESLWSLLAS 361 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 G L+YATCSV EN + FL R DA E Q LP E DGFFYA L Sbjct: 362 DGKLLYATCSVFARENQQVVAEFLARHDDASKIELSATGMIDGQLLPDRE-HDGFFYALL 420 Query: 427 IKK 429 K+ Sbjct: 421 HKQ 423 >UniRef50_Q0VTE3 tRNA and rRNA cytosine-C5-methylase, putative n=2 Tax=Alcanivorax RepID=Q0VTE3_ALCBS Length = 447 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 161/432 (37%), Positives = 227/432 (52%), Gaps = 12/432 (2%) Query: 4 QRNLRSMAAQAVEQVV---EQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 + R A +A+ +V+ G+SL +L + D ++++CFGV R L L+ Sbjct: 13 TPDPRLSAVRALNRVLPGKGDGESLREVLRDF--PLQGSDGGQMRDICFGVCRHLRPLNH 70 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 +N+ +++P+ G + V ++ GLY+L ++ P HA + + +K P GL N Sbjct: 71 WLNQQLSKPLKGSAQPVRLALLAGLYELWFSNRPAHAIVNAYPQLCRKLKAPWAAGLSNA 130 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 VLR+ + E + + P WL KR +K +P ++ AN Q PP LR+NR Sbjct: 131 VLRKASQITLEQAVADAPINIQLSLPDWLFKRWEKDWPNNADAMARANLQTPPFTLRVNR 190 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 R +A L G P ++ L+ PV LPGFE G ++VQD +AQ Sbjct: 191 QQQQRADAIAAL---GEGARAGYIAPYSIYLQPARPVLQLPGFEQGALSVQDEAAQLPAE 247 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 L ILD CAAPGGKT + E P A + A++++ +RL+R+ +NL RLG T+ Sbjct: 248 LLQAPAKGRILDACAAPGGKTGQLREKFPAADLSALELEGKRLARIRENLARLGTDVTLL 307 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 QGD P W FD ILLDAPCSATG++RR PD+KW R+ DI L LQ+ +LDA+ Sbjct: 308 QGDASDPKTWWDGTPFDAILLDAPCSATGILRRQPDVKWHRKASDIGVLVDLQARMLDAL 367 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ----PGKQNLPGAE 416 WP LK GG LVYATCSVL +EN Q++ FLQR A G Q P Sbjct: 368 WPLLKPGGMLVYATCSVLRDENDHQVRNFLQRQPQARDVTPRPEGATMVDAGWQLFPEQH 427 Query: 417 EGDGFFYAKLIK 428 DGF+ A L K Sbjct: 428 GPDGFYLACLRK 439 >UniRef50_B1C5S4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S4_9FIRM Length = 450 Score = 417 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 113/445 (25%), Positives = 201/445 (45%), Gaps = 20/445 (4%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVS-DKDKALLQELCFGVLRTLSQLDWL 61 K R A + + +V+ G + L + + D+ L + GV++ +++L+++ Sbjct: 6 KISPSRVSAYKVLSEVLMTGAYSNIALTKHLASIKIEADRRLCTNIVHGVIKKINKLEYV 65 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLING 120 ++ L P+ V + +GLYQ++Y +IP +A + ++V + G +NG Sbjct: 66 LSTLSNTPVNELDERVKISLYIGLYQIIYLNKIPEYAIVNDSVNLVKMFVGKKASGFVNG 125 Query: 121 VLRQFQRQQEELLAEFNAS-----DARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 +LR R++ EL + Y L ++L +Y E+ + + P + Sbjct: 126 ILRNALRKKHELKEIEFSDFFDIMYYEYGFKRALSEKLLLSYSKEELIEYAKYSILPPNV 185 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 LR+N+ +R+ E G + P+ + + + V L ++ G ++QD + Sbjct: 186 TLRVNKLKTNREELKNRFKEKGFEVR-DTFVPEGIEVLSHLNVTLLEEYKKGLFSIQDCA 244 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRL 293 L + +LD+CAAPGGK+ H E+ +V+ DI ++L + +K+L Sbjct: 245 GMVVAHSLDVKEDMKVLDMCAAPGGKSMHTSELMNNSGDIVSCDIYTKKLEIMNFRMKQL 304 Query: 294 GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 G+ + + C FDRI+ D PCS GVIRR P+I + I EL ++Q Sbjct: 305 GINNIMTKKLDGTIFNECYMNTFDRIICDVPCSGLGVIRRKPEILIYYSNEKIEELKKVQ 364 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK---- 409 +IL+ +LK GG L+Y+TC++ EEN + + L+ D +L E P + Sbjct: 365 RQILENGIRYLKKGGVLIYSTCTINKEENEDIVYSILKEHEDIKLNEINLPFEFDYDKAK 424 Query: 410 ------QNLPGAEEGDGFFYAKLIK 428 D FF AKL K Sbjct: 425 AKEGILNISGDKNNIDSFFIAKLTK 449 >UniRef50_A8RCQ7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCQ7_9FIRM Length = 415 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 113/428 (26%), Positives = 194/428 (45%), Gaps = 21/428 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 N R+ A ++++ + +L Q V KDKAL+ ++ +G L+ + + Sbjct: 2 NARAYAFALLKEICIDEGYSNLLLRNKLQSVDPKDKALVTQIVYGTLQNYRLVRYQWQSY 61 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + + V L+ + +YQLLY ++P +A + E V P+ L+N VLRQ Sbjct: 62 VKKEPCK---EVALLLDMSVYQLLYMDKMPAYAVIDEAVRITKKNIHPRFSALVNAVLRQ 118 Query: 125 FQRQQEELLA--EFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRT 181 +R + L HP+WL+ + Y ++ + I ++ + +R+N Sbjct: 119 VERNGKRELEGNAIEQLALETSHPTWLVAMWKAQYGWQECEKICHSDLEIRKQCVRVNTM 178 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTW 241 S + LA + A+ + ++ G V++QD ++Q + Sbjct: 179 KASVEELLAS-----GEFVKGNLAEHALYYLGN-DIIHSNYYKQGLVSIQDEASQLVAQY 232 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 + PQ E ILD+C+APG K HI E + +V DI R+ + + +RL +++ Sbjct: 233 VDPQPQERILDVCSAPGTKACHIAERMGDKGSIVCGDIHAHRVELIKNGARRLQLQSIQA 292 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 Q + + FDR+L D PCS GV+ R DIK+ + D+ L LQ +IL + Sbjct: 293 QVMDATSLKEIEGEMFDRVLCDVPCSGYGVLARKSDIKYHAKSTDMDTLIPLQQQILQSA 352 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 H+ G LVY+TC++ +EN Q+ AFL + + E + T P DG Sbjct: 353 SKHVVKDGILVYSTCTLNKKENEKQVAAFLAQHEEFECLQQQT-------IFPYTHHSDG 405 Query: 421 FFYAKLIK 428 F+ AKL + Sbjct: 406 FYIAKLKR 413 >UniRef50_C0EY63 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY63_9FIRM Length = 466 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 118/448 (26%), Positives = 201/448 (44%), Gaps = 21/448 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ---QKVSDKDKALLQELCFGVLRTLSQ 57 M+K+ ++R+ A + + + + Q D+A LC GV Sbjct: 16 MEKRTDMRAEALDTLIDIERNKKLSHIAIGETLMRNQFEKKADRAFYTRLCEGVTERKIY 75 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGL 117 LD++++ PM + + L+ +G YQ+L+ + AA +E V A +L G Sbjct: 76 LDYILDHYSKTPMKKCKPLIRSLLRMGAYQILFMDVRDAAACSEAVSLAKKRGFGRLSGF 135 Query: 118 INGVLRQFQRQQEELLAEFNASDAR-----YLHPSWLLKRLQKAYPEQ-WQSIVEANNQR 171 +NGVLR R++E L D + Y P WL K + + Y ++ + I + + Sbjct: 136 VNGVLRTLVREKENLPVPDKKDDVKYVSIIYSVPEWLSKLIIEQYGKESAEKIFASFLEA 195 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 P+ +R N + + + L+EAG+K P A + + + F G VQ Sbjct: 196 RPLTIRTNLSKTTPEELEKELEEAGVKVEKGNYLPYAFTISNLNYLGKIAAFRQGKFAVQ 255 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNL 290 D S+Q + G+ +LD+CAAPGGKT H + + +V++ D+ E + + +N Sbjct: 256 DESSQLAVAIADINEGDFVLDVCAAPGGKTFHAADRLKGAGKVLSRDLTEYKTELIEENK 315 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 R+ + Q + D +L D PCS G++ R DIK+ + + ELA Sbjct: 316 DRMHYENVEVQQWDALEEDESLLESVDVLLADLPCSGLGIMGRKNDIKYQMTEEQLGELA 375 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG-------- 402 LQ +IL +W ++K GG ++++TC++ EN+ IK + T L Sbjct: 376 ALQRQILSVVWKYVKPGGQMIFSTCTLNKGENAENIKWIEENTP-LHLVSIEEYLPQNLK 434 Query: 403 --TPEQPGKQNLPGAEEGDGFFYAKLIK 428 T Q Q +PG + DGFF +K + Sbjct: 435 NRTGSQGYLQLIPGEDTCDGFFISKFKR 462 >UniRef50_UPI0001BC65B2 16S rRNA m(5)C 967 methyltransferase n=2 Tax=Fusobacterium RepID=UPI0001BC65B2 Length = 440 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 121/433 (27%), Positives = 213/433 (49%), Gaps = 23/433 (5%) Query: 12 AQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLINKLMARP 69 A+ Q V+QG+ + L L + +K + E+ +GV+R LD++I++ + Sbjct: 7 IIALLQEVDQGKYSNIALNELFHRKVFKKGEKNFITEVFYGVIRNKIYLDYMISQKVK-- 64 Query: 70 MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR-- 127 K+ + L + YQ+ + + + E VE A + +NGVLR FQR Sbjct: 65 -EVKKDWLQQLFRLSFYQIRFMKSDDKGVIWEGVELAKKKYGVSVSRFVNGVLRNFQRSF 123 Query: 128 -QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 ++EE L + + +P W ++++K PE++ I+++ + P + +R+N +S + Sbjct: 124 IEEEENLKREGREEVLFSYPKWFFEQIKKESPERYIEILKSLKRTPLLSVRVNLLKYSCE 183 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 + L + ++ + + + F++G + VQDA++ L + Sbjct: 184 EFEEYLRKEEIEIIKK---VETIYYTKAGNLLNSSEFQEGKIIVQDAASYLAAKNLGAKP 240 Query: 247 GEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATV-KQGDG 304 GE +LD C+APGGKT+ + E E Q++++DI ++ + +N K+LG+ + D Sbjct: 241 GEIVLDTCSAPGGKTSVLAEAMKNEGQILSLDIHTHKIKLIQENCKKLGITIVQAVKLDA 300 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R+ S ++FDRIL+DAPCS GV+ + P+ + +++ +I EL LQ EIL A L Sbjct: 301 RHLS--LQGKKFDRILVDAPCSGYGVLAKKPEGLYNKKEENIKELVTLQREILMAAAEVL 358 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ--------PGKQNLPGAE 416 K GG +VY+TC++LP EN K FL+ + E + PE G E Sbjct: 359 KVGGEMVYSTCTILPAENQENAKWFLETHPNFESIQLQIPENVAGTYDDCGGFSIDYQEE 418 Query: 417 EGDGFFYAKLIKK 429 D F+ K K Sbjct: 419 VVDSFYMIKWRKN 431 >UniRef50_C4G2S0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S0_ABIDE Length = 455 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 115/454 (25%), Positives = 201/454 (44%), Gaps = 31/454 (6%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDW 60 N R + ++ G+ +L + + + L G + + LD+ Sbjct: 2 AVNEREIVLDMFLS-LKDGKPGHIVLKDTLDNYLYLDKASRGFITRLYEGSIEKMIYLDF 60 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 +IN P+ + + L+ +YQ+ + R+P AA+ E V+ A L G +N Sbjct: 61 VINSFSKTPVKKLKPIIKILMETAVYQIFFMDRVPDSAAINEAVKLAKKRGLAGLSGFVN 120 Query: 120 GVLRQFQRQQEELLAEFNA------SDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRP 172 GVLR R +E + + +Y P + + K Y Q + I+EA ++ Sbjct: 121 GVLRNIARNRENIALPDKDKEYIRYLEVKYSMPKEVTEHFIKEYGNVQAEEILEAFEKKQ 180 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P+ R+N T +R+ + L E +K +P+++++ ++ L FE+G +QD Sbjct: 181 PIVARVNGTRLTREELVKKLTEEDVKVSTDTVFPESLKILELDSLNFLESFENGDFVIQD 240 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 S+Q +LD+CAAPGGKT + E ++ A DI E++ + +N+ R Sbjct: 241 ESSQFIGKIAELPQNAKVLDICAAPGGKTLLMAEKPEAERITACDISEKKTGLIEENINR 300 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 +G+K + + E+ FD ++ D PCS GVI R DIK+ I ELA+L Sbjct: 301 MGIKKVITMVNDATVFNKKFEEDFDLVICDLPCSGLGVIGRKRDIKYNITGNKIKELAKL 360 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE------------ 400 Q EIL+ ++K GG L+++TC++ EN K F+ + + Sbjct: 361 QREILENAGKYVKKGGYLIFSTCTMSKLENEENFK-FISEFSGFSPVDFSDKIKDSVVRY 419 Query: 401 ------TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 E+ + LPG DGFF ++ ++ Sbjct: 420 KAGGRLISEAEKGYIRLLPGELGTDGFFISEFMR 453 >UniRef50_Q1Q7P9 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7P9_9BACT Length = 462 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 132/467 (28%), Positives = 215/467 (46%), Gaps = 53/467 (11%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLIN 63 ++R + + + +V E+ ++ Q VS +DK LL EL G+ R LD +++ Sbjct: 2 DVRLESIRILRKVDEKDVLAQELVEERCQQTNVSRRDKHLLLELVNGITRHRLSLDTILS 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAI-KRPQLKGLINGV 121 P + + Y + +G+YQ+++ +IP AA+ +VE + +RP N + Sbjct: 62 FFSKIPPQKIEPWLLYALRLGIYQMIFLDKIPHSAAVNTSVELVKNLIRRPDAARFANAI 121 Query: 122 LRQFQRQQEE-----------------------------LLAEFNASDAR----YLHPSW 148 LR R + + Y HP W Sbjct: 122 LRAVDRTIKNKYSVNHKNVNQQKLLYKKENVWCEFSEPIFPDPGENLTSYIAKNYSHPEW 181 Query: 149 LLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPD 207 L+KR Y ++ I +ANN P + LRIN S + + +LL++ G+ + Sbjct: 182 LIKRWLTRYGIDKTIEICKANNHIPTLSLRINHNKTSINEFASLLEQNGILARVID--NN 239 Query: 208 AVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGE----HILDLCAAPGGKTTH 263 A+ + V +PGF +G +VQD ++ T+L + +LD+CAAPGGKTTH Sbjct: 240 ALIINKSV-VSDIPGFSNGLFSVQDITSMKVGTFLIAETPTAGAITLLDMCAAPGGKTTH 298 Query: 264 ILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD 322 I E + + + A+DI +RL RV +N +RLG+K + +FDR+L D Sbjct: 299 IAEIIQNKGSIYALDISLKRLHRVKENCQRLGIKNITIICCDASEGKIPFRGKFDRVLAD 358 Query: 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 PCS TGV+ R + +W +++I +LA LQ +L LK G LVY+TCS+ PEEN Sbjct: 359 VPCSNTGVLSRRVEARWRITEKNIKQLAALQYSLLKTGSTMLKQDGILVYSTCSIEPEEN 418 Query: 383 SLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 ++ FL+ L + P +GDG + A++ K+ Sbjct: 419 QEVVQKFLKNEPQFYLDKED-------CYSPEINKGDGGYMARIRKR 458 >UniRef50_Q2YC21 Sun protein n=7 Tax=Betaproteobacteria RepID=Q2YC21_NITMU Length = 442 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 178/441 (40%), Positives = 254/441 (57%), Gaps = 26/441 (5%) Query: 9 SMAAQAVEQVVEQGQSLSNILP---PLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 +AA VE+VV G SL+ +L +SD+ + +Q+L +GVLR QLD L+ L Sbjct: 6 RLAATTVERVV-SGASLTTVLQETWRSHSGLSDQQRGAIQDLSYGVLRFYGQLDILLGLL 64 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETV--------------EGAIAIKR 111 + +P+ +++ YL++VGLYQL Y++ PH + V Sbjct: 65 LNKPLK--DQSLRYLLLVGLYQLQYSKTAPHVVVDSAVSASCSPSIDGRNSRNMLDPRHA 122 Query: 112 PQLKGLINGVLRQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQ 170 + GL+N +LR F R++ LL + A++ RY HP W + +L+ YP ++Q+++E N Sbjct: 123 KSIGGLVNAILRNFLRKRPALLEKTAATEVGRYSHPQWWIDKLRAQYPSRYQAVLETANI 182 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGF--PHADYPDAVRLETPAPVHALPGFEDGWV 228 RPPM LR+N+ + +++ LL AG+ + +A+ L P PV LPGF G V Sbjct: 183 RPPMALRVNQRRTNVEAYQKLLHNAGLNARRPENEWTEEALELFHPVPVEKLPGFGQGLV 242 Query: 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYD 288 +VQD +AQ L PQ+G +LD CAAPGGK+ H+LE+ AVD D +RL R+ Sbjct: 243 SVQDVAAQMAAPLLCPQSGMRVLDACAAPGGKSAHLLELTDLEL-TAVDNDGERLERLKQ 301 Query: 289 NLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 N RLG+K + GD +P +W + FDRIL DAPCSA+GV+RRHPDIKWLRR+ D+ Sbjct: 302 NFTRLGLKPYRIIHGDATHPGEWWDGRPFDRILADAPCSASGVVRRHPDIKWLRRESDLA 361 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP 407 + A++Q + LDA+W L GG L+Y TCS+ EEN LQ+++FL DA L PE Sbjct: 362 QFAEIQRKTLDALWQTLVKGGKLLYVTCSIFAEENGLQVESFLNHHPDARLLPFSVPEIV 421 Query: 408 GKQNLPGAEEGDGFFYAKLIK 428 Q LP DGFFYA L K Sbjct: 422 EGQLLPDLH-HDGFFYALLEK 441 >UniRef50_C8WW78 Sun protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW78_ALIAD Length = 451 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 140/449 (31%), Positives = 227/449 (50%), Gaps = 32/449 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R A QA+ +V G L+ L V ++D+AL E+ +G LR LD L++ L Sbjct: 6 RRRAYQALIRVERDGAFLNAALQEALAGAGVDERDRALATEIAYGTLRRQITLDRLLSPL 65 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + RPM+ V ++ +G YQ+ + R+P +AA + VE A RPQ L+N VLR+ Sbjct: 66 VRRPMSKLDPEVRVILRMGAYQMTWLNRVPAYAAANDAVELAKRH-RPQAAALVNAVLRR 124 Query: 125 FQRQQEELLA----------EFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 + + ++ + Y P+W+++RL + ++ + + + N+ P Sbjct: 125 YAERAQDWEDLLNKAVAGAKDVERWSVMYSVPAWIVERLVADHGADRVLAALASMNEPAP 184 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 M LR NR SR+ +A L G P A D +R++ V L + DG+VT+QD Sbjct: 185 MSLRANRLRGSREEAIARLGAEGAVARPAALAEDGLRVQGQVDVTRLQAYRDGYVTIQDE 244 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKR 292 A L P+ G ++DLCAAPGGKTTH+ E+ ++ A D+ ++ + +R Sbjct: 245 GAMLVAPLLRPEPGMRVVDLCAAPGGKTTHLAELMGDRGEIDAYDVTVAKVRAIRQQAER 304 Query: 293 LGMKATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 LG+++ + GDGR + E +D L+DAPC+ GV+RR PD+++ RR D+ +LAQ Sbjct: 305 LGLQSVHPRLGDGRQVT---PEGLYDAALVDAPCTGLGVMRRRPDLRYRRRPEDVAQLAQ 361 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA-DAELCETGTP------ 404 LQ +L +++GG +VY+TC++L EEN ++ + + + G Sbjct: 362 LQRALLRRACAIVRSGGCVVYSTCTLLKEENESVVRDVASDPSVGVRIEDIGGDLAPTLA 421 Query: 405 -----EQPGKQNLPGAEEGDGFFYAKLIK 428 PG P E DGFF A+L + Sbjct: 422 VSVGERSPGFLLWPDWHETDGFFMARLRR 450 >UniRef50_C5WIG1 16S rRNA m(5)C 967 methyltransferase n=44 Tax=Streptococcaceae RepID=C5WIG1_STRDG Length = 452 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 121/441 (27%), Positives = 206/441 (46%), Gaps = 24/441 (5%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWL 61 + ++R A +E + +QG + L +S KD+ALL E+ +G + L+W Sbjct: 18 KISIRGKALLTLEHIFDQGAYTNIALNQQLSNKALSTKDRALLTEIVYGTVSRKISLEWY 77 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIK-RPQLKGLIN 119 + + + V+YL+M+ LYQL+Y ++P HA + + V A + + +N Sbjct: 78 LAHYVKDR-DKLDKWVYYLLMLSLYQLIYLDKLPAHAIVNDAVGIAKNRGNKKGAEKFVN 136 Query: 120 GVLRQFQRQQEELLAEFNAS----DARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 +LRQF + +Y P WL+K+L+ + ++ +I+E+ R Sbjct: 137 AILRQFTSHPLPDMGTIKRRNKYYSVKYSLPVWLVKKLEDQFGSDRSVAIMESLFVRSKA 196 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 +R+ + + + + A F +G +T+QD S Sbjct: 197 SIRV----TDPLKLEKI--AEDLDAERSLLSATGLT-KASGHFAASDYFTNGDITIQDES 249 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 +Q L E ILD C+APGGKT+HI +V+A+D+ + +L V +N RLG Sbjct: 250 SQLVAPTLNIDGDEIILDACSAPGGKTSHIASYLKTGKVIALDLYDHKLELVKENANRLG 309 Query: 295 M--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + ++ D R + + FD+IL+DAPCS G+IRR PDIK+ + +D L + Sbjct: 310 VADNIETRKLDAREVHRHFEKDSFDKILVDAPCSGIGLIRRKPDIKYNKESQDFNALQAI 369 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ-----P 407 Q EIL ++ L+ GG + Y+TC++ EEN I+AFLQ + E + + Sbjct: 370 QLEILSSVCQTLRKGGIITYSTCTIFDEENRQVIEAFLQSHPNFEQVKLNHTQADIVKDG 429 Query: 408 GKQNLPGAEEGDGFFYAKLIK 428 P + DGFF ++ + Sbjct: 430 YLIITPEQYQTDGFFIGQVRR 450 >UniRef50_A8ST69 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8ST69_9FIRM Length = 452 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 113/441 (25%), Positives = 201/441 (45%), Gaps = 19/441 (4%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWL 61 +N R + + + + + L + +S +D+A + + GV +LD++ Sbjct: 3 KNTREVVLSILLDIEKNHTFSNTALGTALRANQFMSKQDRAYITRMVEGVTEKRMRLDYI 62 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLING 120 +N+ + + + ++ +G Y++ Y + H A V+ A L+G +NG Sbjct: 63 VNQFSKTKINKCKPLIRCVLRMGTYEIFYMDSVQDHTACNLCVKLAADHGFGSLRGFVNG 122 Query: 121 VLRQFQRQQEELLAEFNASDAR------YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 VLR R ++ ++ D R Y P LL+ L++ Y E I+ + + P Sbjct: 123 VLRNIARNKDSIVFPDQEKDKRAYYSVMYSVPEELLEILERDYDYETIDRILASGDSDRP 182 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 +R+N S ++ L + G+ + ++ + + +PGF DG VQD Sbjct: 183 TAIRVNTEKISVTAFSEKLRQNGITVERGSMNDTSLLISGYDYIRKVPGFFDGEFVVQDQ 242 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKR 292 S+ + G+ ++D+CAAPGGKT + + E V++ D+ +++ + +N++R Sbjct: 243 SSCLAVKAAGINEGDLVVDVCAAPGGKTMYAAMLTGSEGHVISRDLTDKKTELIEENIER 302 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 LG+ Q + D ++ D PCS G++ R DIK+ + ELAQL Sbjct: 303 LGLSNVTVQVHDAREFDEELTGKADVVIADLPCSGLGIMGRKNDIKYHVSMESVKELAQL 362 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL--CETGTPEQPGKQ 410 Q EILD + ++K GGTLVY+TC++ EN F D L + PE G++ Sbjct: 363 QREILDTVCRYVKPGGTLVYSTCTIDSIENDENAVWFADTH-DFSLCGIDDVVPEHGGER 421 Query: 411 NLP----GAEEGDGFFYAKLI 427 G +E DGFF +K Sbjct: 422 GFVTLHQGIDECDGFFISKFR 442 >UniRef50_A5EWM0 RRNA SAM-dependent methyltransferase, Fmu n=2 Tax=Cardiobacteriaceae RepID=A5EWM0_DICNV Length = 418 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 173/427 (40%), Positives = 236/427 (55%), Gaps = 17/427 (3%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 R AA+ + V+EQ QSL+ +LP + ++ D D+AL QEL +G LR L +L N+L+ Sbjct: 3 AREAAARTLFAVIEQRQSLNQLLPAFKNQLPDIDRALYQELVYGTLREYRSLSFLHNRLL 62 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P+ ++ +G+YQLL + H + ETVE ++ P + GL N VLR+ Q Sbjct: 63 HQPLDK-NPLPAIILNLGIYQLLRLTLGDHGVVHETVELCKKLRCPAVSGLTNAVLRRVQ 121 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 R++ L + AR P+WLL QK + V+A RPPM +R+ R + Sbjct: 122 RERSACLQILEENKAR-NIPAWLLPAYQKD-GD-----VDAFIMRPPMTVRV-RLPQTAT 173 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 W+A G + + AV V LP F G V+VQDA AQ T L P+ Sbjct: 174 QWIAQ---HGANARLNPLHQQAVTFNQAIGVEDLPDFASGGVSVQDAMAQWAATLLQPRA 230 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 GE ILD CAAPGGKT H+LE+AP+ ++A+D RL RV +NLKRL + A + D Sbjct: 231 GERILDACAAPGGKTGHLLELAPQCTLIALDHAADRLERVQENLKRLHLNAHCQTADAAD 290 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 + W FD ILLDAPCS +GVIRRHPDI WLR D D+ +L + Q +LD +W LK Sbjct: 291 LASWYDGHAFDAILLDAPCSGSGVIRRHPDIAWLRSDSDLKQLPKTQYRLLDTLWQTLKI 350 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAEL----CETGTPEQPGKQNLPGAEEGDGFF 422 GG L+Y TCS+LP EN I+ FL +A+L G G + P A+ DGFF Sbjct: 351 GGRLLYTTCSILPRENQQLIEQFLYTHREAQLRPITLPKGLDTGHGWLHYPDADG-DGFF 409 Query: 423 YAKLIKK 429 YA L K+ Sbjct: 410 YALLEKR 416 >UniRef50_UPI00016C38F9 Fmu, rRNA SAM-dependent methyltransferase:Nop2p n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C38F9 Length = 465 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 131/472 (27%), Positives = 206/472 (43%), Gaps = 58/472 (12%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWL 61 R +AA + + + + ++ +S +D+ + +L FGV+R LD L Sbjct: 2 SITARQVAADVLNRSRSRDGFAAELVDDAVNAANLSPQDRRFVTQLVFGVIRRGGTLDAL 61 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLING 120 + + P Q V L+ +G +QL + +P HAA+ ETVE A + P+ KG +NG Sbjct: 62 LKPFIHLPTHAVQDRVWDLLRLGAFQLTFLTHVPKHAAVHETVELAEHVGAPKAKGFVNG 121 Query: 121 VLRQFQRQ------------------------------------------QEELLAEFNA 138 VLR+ + Sbjct: 122 VLRRIAELTTDEFTDAPGAAAVPFALVESAPTPSEGGGRGSYRRLTKPVLPDPATDPAPY 181 Query: 139 SDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGM 197 A + P WL R K Y ++ + N PP+W+R+N+ SR+S+ L + Sbjct: 182 FAAAFSFPQWLANRWLKRYGVDECVRLGFWFNAAPPLWVRVNKLRASRESYRIQLAAQTI 241 Query: 198 KGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAP 257 + P P A+R + LPG+ +G VQD S+ + L Q G ILD CAAP Sbjct: 242 EVEPGEH-PQALRFSQHHSIRDLPGYAEGDFAVQDHSSMLVASALGVQPGMRILDACAAP 300 Query: 258 GGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQF 316 GGKTTH++E+ + A DID +RL V +R+ + ++ F Sbjct: 301 GGKTTHLMELMDGRGHITACDIDPKRLETVAALAQRMRLTGIETV--LLKDNEEFPAGPF 358 Query: 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 D L+D PCS TGVI R P+++W + + L +LQ+ +L +K GG +VY+TCS Sbjct: 359 DAALVDVPCSNTGVIGRRPEVRWRLKPNEFEYLIRLQTRLLILAADRVKPGGAVVYSTCS 418 Query: 377 VLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + P+EN +KA L+ L ++PG DG ++A+L K Sbjct: 419 IEPDENEGVVKAVLRGMRGLTLEA-------EHHSVPGRP-SDGGYWARLRK 462 >UniRef50_B0VHI6 Putative 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHI6_9BACT Length = 438 Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 130/439 (29%), Positives = 204/439 (46%), Gaps = 18/439 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVS--DKDKALLQELCFGVLRTLSQLDWLIN 63 N RS A + +V++ + +L +K+ +D AL L GV++ +LD+++ Sbjct: 2 NFRSEAYTTILKVLKDKEYSDTLLHQRAKKLKNAGEDPALFYNLVKGVIKLYLKLDYILQ 61 Query: 64 KLM-ARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGV 121 + + + T + L+ +GLYQLLY IP +AA+ ETVE A + PQ+ +N V Sbjct: 62 QYVDKKKYTDTDIKIKVLLYMGLYQLLYLNSIPDYAAVNETVELAKTLFNPQVADFVNAV 121 Query: 122 LRQFQRQQEELLAEFNASDARY--LHPSWLLKRLQKAYPEQWQSIVEAN-NQRPPMWLRI 178 LR + R E A Y P L+K+ + E+ + N+ P + +R+ Sbjct: 122 LRNYLRNPEVSYPNEPALRIAYEHSFPPELIKQWLDLWGEENTEYLAMFFNENPELHIRV 181 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 N T + + A + + P P A V F +G+ +VQD SA Sbjct: 182 NSTATTPEKLKAYFAKRNIVITPSQASPMMFHTAQTAEVLEDVAFSEGYFSVQDTSAALI 241 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 + L PQ E +LDL AAPGGK ++I E +V+AVD ++ + RL + Sbjct: 242 VELLDPQKEESVLDLFAAPGGKCSYIAERMDNTGEVIAVDKIPSKMKLLKQAANRLQLTN 301 Query: 298 T-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 + D F R+L+D PCS GV R D++W ++IPEL +LQ + Sbjct: 302 IKMVVTDAFKYGPVAPA--FHRVLVDVPCSGWGVFGRKSDLRWQAH-QNIPELIKLQEKA 358 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT------PEQPGKQ 410 LD + GG LVY+TC++ P+EN QI AFL++ + EL + Sbjct: 359 LDYAANFVTPGGFLVYSTCTMNPKENEDQISAFLKKNRNFELIPADAFIPERYTSAGYLK 418 Query: 411 NLPGAEEGDGFFYAKLIKK 429 +P DG F AKL ++ Sbjct: 419 TIPFKHNMDGAFAAKLQRR 437 >UniRef50_B9K874 Sun protein n=6 Tax=Thermotogaceae RepID=B9K874_THENN Length = 431 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 127/439 (28%), Positives = 217/439 (49%), Gaps = 27/439 (6%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNI-LPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N+R +A + + + E+ + L + + ++D+D+ L+EL +GV+R LDW IN Sbjct: 3 TNVRLLAYRLLRK-YEKEKFLDREDVDSVLSVLNDRDRRFLKELVWGVMRKEELLDWYIN 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVL 122 +L+ P V + +G+YQLL+ +P +AA++ETV+ K L+N VL Sbjct: 62 QLLRNP--DIPPAVRVALRMGVYQLLFMDGVPDYAAVSETVKLVKNEN---FKKLVNAVL 116 Query: 123 RQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINRT 181 R+ + + + Y HP WL+ + PE+ I+E + P LR+N Sbjct: 117 RRV-----KSVPPPSDLHLVYSHPKWLVDYWRSFLPEEVVLRIMEWYQKPLPTVLRVNSL 171 Query: 182 HHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCMT 240 +R+ + +L + G + P +V ++ P++ +G TVQ S+Q Sbjct: 172 VTTREEVIEILSKEGTEAIYGKHSPFSVVIKKLGVPLNDSKVITEGLATVQGESSQIVPL 231 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 + + +LD C+APGGKTT I E+ + +++A D+ +RL V +++RL + + Sbjct: 232 LMDLEPNMKVLDTCSAPGGKTTFIAELMKDKGEILATDVSMERLQLVEKHVRRLKLSSVK 291 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 + + +FDRIL+DAPCS+ G R HP++ + + EL++ Q IL Sbjct: 292 IKLADAERLTEFIQDEFDRILVDAPCSSLGTARNHPEVLRRAKKEEFKELSEKQFRILSQ 351 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----------GTPEQPGK 409 W LK GG L+Y+TC++ EEN+ IKAF ++T D E+ + G + G Sbjct: 352 SWKLLKKGGILLYSTCTITKEENTEVIKAFAEQTPDVEVIDLRKRLEDYGVEGLWDGFGF 411 Query: 410 QNLPGAEEGDGFFYAKLIK 428 LP F+ + L K Sbjct: 412 LMLPDETLTP-FYVSALKK 429 >UniRef50_A8G3E0 Sun protein (Fmu protein) n=7 Tax=Prochlorococcus marinus RepID=A8G3E0_PROM2 Length = 438 Score = 405 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 141/435 (32%), Positives = 223/435 (51%), Gaps = 24/435 (5%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R A + + +V G + L + + + D A + EL FG +R LD + Sbjct: 8 RKAAWEILLKV-SSGDFSDHALEKVLKNYQFNSLDIAFITELSFGCIRYRKFLDLWTDHT 66 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + + +L+ +GLYQLL +IP AA++ TVE A L G +N +LR Sbjct: 67 SKITHKKQPPKLRWLLHIGLYQLLKMDKIPFPAAISTTVEVAKKTDLNGLAGTVNAILRN 126 Query: 125 FQRQQEELLAEF------NASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLR 177 R+ E+ + P WL+K L K + ++I++A N++P + LR Sbjct: 127 ASRKLEQKIFPELSSDKKERISYLESFPLWLVKDLYKWVGNSEGENIIKAFNKKPSIDLR 186 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQ 236 IN+ + D +L +L E + D + + L++ P + LPG+ DG T+QD S+Q Sbjct: 187 INQLKTNLDKFLIVLYENKIDAEIIKDLHNGITLKSNPRSIKNLPGYSDGLWTIQDRSSQ 246 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM 295 L P+ GE ILD CAAPG K+TH+ E+ + A+++AVD E+RL + NL RL + Sbjct: 247 WIAPLLNPKEGEKILDACAAPGSKSTHLAELTNDSAEILAVDRSEKRLKILQSNLVRLNL 306 Query: 296 KAT-VKQGDGRYPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 K+ + D + + FD+ILLDAPCS G + R+PD +W I L L Sbjct: 307 KSVNTLKADATSLIELNPKFISYFDKILLDAPCSGIGTLSRNPDSRWSLSKEKIKSLTLL 366 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412 Q ++L+ I+P LK G +VY+TC++ P+EN+L I+ F+++ +L KQ L Sbjct: 367 QEKLLEKIFPLLKKDGIMVYSTCTICPDENNLLIEKFIEKNKGLKLVSQ-------KQIL 419 Query: 413 PGAEE-GDGFFYAKL 426 P + GDGF+ A + Sbjct: 420 PRLDYPGDGFYSAII 434 >UniRef50_C7RGU2 Fmu (Sun) domain protein n=4 Tax=Anaerococcus RepID=C7RGU2_ANAPD Length = 430 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 109/428 (25%), Positives = 209/428 (48%), Gaps = 13/428 (3%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 + ++ +++ + + + + L+++V + ++ +GVL +D++I KL Sbjct: 5 ELILNSLVRIICEDKKSNEEINYLEKRVGNL--PYATKVIYGVLENKIYIDYMIGKLSKI 62 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 + + V ++ +G+Y + + +A + + VE R + G +N +LR F R Sbjct: 63 KLKKIHKNVLTILEIGIYNIHFLETKDYATVDKLVELTKRKNR-RSSGFVNAILRNFIRD 121 Query: 129 QEELL-----AEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH 182 ++E+ + + RY P + + + Y + + + +N + +RINR Sbjct: 122 EKEIAKIKISDDIKSLSVRYSMPEEITRYIFDNYGMDYTKDFLRYSNNEAVLSIRINRLK 181 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 +D+ + L G + +A+ ++ P+ + A F++G T+Q ++ + L Sbjct: 182 TDKDNLIKKLKAKGFEIEVSKISENALLVKNPSGLVATSEFKEGLFTIQQEASMKTVEVL 241 Query: 243 APQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 PQ ILDLCAAPG KT+++ E +++A DI + +L+ + +N++RLG+ Sbjct: 242 DPQKDSKILDLCAAPGTKTSYLAEYTRNSGKIIANDISKNKLNLIRENIERLGLSNIELD 301 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 + E++FD +L+DAPCS GV+ R P+I++ R DI LA+LQ +IL Sbjct: 302 SFDASVYRSDFEEKFDYVLVDAPCSGLGVMARKPEIRYNRTISDIKVLAELQRKILANAI 361 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 +LK G LVY+TC++ EN FL+ D L + + + ++ DGF Sbjct: 362 RYLKPAGILVYSTCTLGNIENLDN-YNFLKA--DERLTSLEIDGKKYLEFVSFLDKTDGF 418 Query: 422 FYAKLIKK 429 F +K KK Sbjct: 419 FISKFKKK 426 >UniRef50_C3WQ58 16S rRNA m(5)C 967 methyltransferase n=15 Tax=Fusobacterium RepID=C3WQ58_9FUSO Length = 435 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 116/439 (26%), Positives = 208/439 (47%), Gaps = 25/439 (5%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N++ +A + QV ++G + L + ++ K+KA + E+ +GV+R LD++I Sbjct: 2 NVKQVAINLISQV-DKGAYSNIALNETFKTLNINSKEKAFITEIFYGVIRNKKFLDYIIE 60 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 K K+ + L+ + +YQ+ + + E E A + ING LR Sbjct: 61 KNTK---EIKKEWIRNLLRISIYQITFMDSDNKGVVWEATELAKKKYGVPISKFINGTLR 117 Query: 124 QFQRQQEELLAEFNAS---DARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRIN 179 + R ++ L + Y P W L+K Y + + + + + P + +R+N Sbjct: 118 NYLRNKDSELKSLADEKNYEVLYSIPKWFCDMLEKQYGNENLKQAITSLKKIPYLSVRVN 177 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 + ++ + L E ++ D V + F+ G + QDAS+ Sbjct: 178 KLKYTEKEFEEFLKEKDIQIIKKI---DTVYYINSGLIINSEEFKTGKIIAQDASSYLAA 234 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L E +LD+CAAPGGKT + E + +++A+DI + ++ + N+K+LG+ Sbjct: 235 KNLGVMPNELVLDICAAPGGKTAVLTENMENRGEIIAIDIHQHKIKLIETNMKKLGIDIV 294 Query: 299 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 D R ++ ++FD+IL+D PCS GVIR+ P+I + + +I ELA+LQ EIL Sbjct: 295 KAIVMDARNVNKQ--GRKFDKILVDVPCSGYGVIRKKPEILYSKNRENIEELAKLQLEIL 352 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET--------GTPEQPGK 409 ++ LK GG L+Y+TC++ EEN+ I+ FL+ + ++ + + G Sbjct: 353 NSAADILKDGGELIYSTCTITDEENTNNIEKFLKEREEFKVEKLYILENVSGDYDKLGGF 412 Query: 410 QNLPGAEEGDGFFYAKLIK 428 E D F+ KL+K Sbjct: 413 CINYKEEIMDNFYIIKLVK 431 >UniRef50_A8YVW1 rRNA methylase n=27 Tax=Lactobacillus RepID=A8YVW1_LACH4 Length = 454 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 116/444 (26%), Positives = 209/444 (47%), Gaps = 22/444 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQL 58 + ++ R+++ + + +V++ G + L + +S D+ L + +G ++ L Sbjct: 13 LSTNKSARAISLETLIKVLQNGSYSNISLNNSLKHSDLSIADQNLATRIVYGTIQYRLFL 72 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKG- 116 ++ + L+ +T ++ + L+++ LYQ+++ ++P A L E + A + G Sbjct: 73 EYQLTGLLKTKIT--EKYLKPLLLMSLYQIIFLDKVPNRAVLDEANKLAKQFGKHHSSGY 130 Query: 117 -LINGVLRQFQRQQEELLAE---FNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 ++NG+LR F R+ L E + P WL+K L + ++ QS++ + N Sbjct: 131 RVVNGILRAFIRRGVILPDEKDTIKYLSIKESVPEWLVKYLIDNWGMQKAQSVLSSINDP 190 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQ 231 +RI+ R+ L + G + + L + FE G + +Q Sbjct: 191 AKNSVRISSL-ADRNKVFDQLKKEGYQPEWSNLSLNDAVLSHGG-ISESDLFEQGKLIIQ 248 Query: 232 DASAQGCMTWLAPQNGEH--ILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN 289 D +A + + +LD C+APGGKT I E V A+DI E++L V +N Sbjct: 249 DEAASLVVEAFDFDQNQTEHVLDACSAPGGKTVQIAE-NIHGDVTALDIHEKKLRLVKEN 307 Query: 290 LKRLGMKATVKQ--GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 +R+ + V D R + +F +IL+DAPCS G++RR P+I++ + +D+ Sbjct: 308 ARRMHVLDKVTTKACDARKAHEIFKAGEFTKILVDAPCSGLGLLRRKPEIRYTKSLQDLR 367 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT---- 403 L ++Q ILD+I LK G LVY+TCS+ EEN +K FL+ EL Sbjct: 368 NLQKIQLTILDSISKLLKAEGELVYSTCSISMEENEEVVKRFLRIHPGFELKPFSLSKLE 427 Query: 404 PEQPGKQNLPGAEEGDGFFYAKLI 427 + + +P + DGFF AK Sbjct: 428 SKTGMLKIMPDQDGNDGFFIAKFR 451 >UniRef50_B0PFT6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFT6_9FIRM Length = 450 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 128/438 (29%), Positives = 203/438 (46%), Gaps = 21/438 (4%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQL 58 MKK + R AAQA+ ++ G + + L + + ++ A L + VL + Sbjct: 25 MKK--DARYTAAQALLRMESAGAYSNLTIDSLIEKNGLDAREGAFAAALFYTVLERRLTI 82 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGL 117 D ++ AR + + V + +G+ QL++ + +AA++E+V A+ + G Sbjct: 83 DHVLAAYCARGLASLSKPVLQTLRLGVCQLVWMDGVDDYAAVSESVNLTRALGCAKASGF 142 Query: 118 INGVLRQFQRQQEELLA----EFNASDARYLHPSWLLKRLQKAYPEQWQ-SIVEANNQRP 172 +NGVLR F R + +L Y P WL++ AY E ++ A+ RP Sbjct: 143 VNGVLRAFLRADKAVLPVKGGTAERLSVEYSCPVWLVEAWLSAYGEAAALRVLRASLGRP 202 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P++LR N S L G+ + +L F +G VQD Sbjct: 203 PIYLRANTLRVSAQQLCERLAAEGVAAQLAEPPAGCLLARGRVEPESLASFGEGLFHVQD 262 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLK 291 ++Q C L GE +LD+CAAPGGK+ I E + ++VA D+ ++R V K Sbjct: 263 RASQLCAAALGALPGERVLDVCAAPGGKSFTIAEHMENSGELVARDLHQKRARMVQCGAK 322 Query: 292 RLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 RLG+ FDR+L D PCS GVIRR P+IK+ + + + L + Sbjct: 323 RLGLSIIHASAGDAAVYDASL-GSFDRVLCDVPCSGFGVIRRKPEIKY-KPQKSVEGLPE 380 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQN 411 +Q +IL +LK+GGTLVY+TC++LP EN ++ L T A +Q Sbjct: 381 IQYKILKTSTHYLKSGGTLVYSTCTLLPAENERVVQRLLDETNGA--------FNIVEQR 432 Query: 412 LPGAEEGDGFFYAKLIKK 429 + E+ DGFF + L K+ Sbjct: 433 VYTGEDTDGFFVSVLKKR 450 >UniRef50_D0KVS1 Sun protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVS1_HALNC Length = 437 Score = 400 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 168/439 (38%), Positives = 231/439 (52%), Gaps = 15/439 (3%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 + + ++ AQ + VV QG SL L + + + L+Q + + VLR L + Sbjct: 2 PRLSPEALTAQLLLSVVGQGVSLDAALGRVLSQAQPVHRGLVQAMGYEVLRHYEALVFWR 61 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + L+ RP+ K + L++VGL ++ R ++ V+ A + P GL+N VL Sbjct: 62 DSLLERPIPAKSAIIALLLLVGLERIRGARREASRSVNSAVQAARELGHPWATGLLNAVL 121 Query: 123 RQFQRQQEELLAEFN--ASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRIN 179 R+ RQ EE + F S A P WL L + E + ++ A PPM LR+ Sbjct: 122 RRAVRQIEEGVDPFAQAPSAAGARLPQWLFDALTVDWGEARASALGSALATHPPMTLRV- 180 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 R ++ L ++ P A + L P V LPGF +G V+VQD +AQ + Sbjct: 181 --AGDRAAYGEQLSSIEIEANPTAFSTRGLNLVHPMDVDRLPGFAEGQVSVQDEAAQWVV 238 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L G+H+LD C+APGGKT +L+ PE+ V AVDID R++RV +NL+R + A + Sbjct: 239 DLLDLAPGQHVLDACSAPGGKTLAMLQHQPESNVTAVDIDTTRMARVQENLERGQVFARL 298 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 GD P W Q FDRIL D PCSATGVIRRHPDIK LRR D+P L + Q+ ILDA Sbjct: 299 IVGDAGAPQDWWDGQPFDRILADVPCSATGVIRRHPDIKRLRRPEDLPVLVERQAVILDA 358 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP---------GKQ 410 +W LK GG +VYATCS+L ENS Q+ AFL+R DA G+Q Sbjct: 359 LWSLLKPGGRMVYATCSILDRENSAQVAAFLRRHGDARALPLSVDWGEPRQIDGQFLGQQ 418 Query: 411 NLPGAEEGDGFFYAKLIKK 429 P +E DGFFYA L K Sbjct: 419 VFPVSEGHDGFFYAVLEKN 437 >UniRef50_B4CZF1 Sun protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZF1_9BACT Length = 410 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 136/430 (31%), Positives = 210/430 (48%), Gaps = 30/430 (6%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R A+ + + IL +K + D+A E FGVLR LS+LD+LI Sbjct: 2 NPRQSCVLALLEWEKGKYFSDEILHTSLEKNPMQPLDRAFFMETFFGVLRNLSRLDFLIG 61 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 +L ++ +GLYQ+ + R PHAA+ E+V + +GL+N +LR Sbjct: 62 QL---REGRIDPQTRAVLRLGLYQIFHMRTAPHAAVNESVAL-----GGRARGLVNAILR 113 Query: 124 QFQRQQEELLAEF--NASDARYLHPSWLLKRLQKAYPEQWQSIV-EANNQRPPMWLRINR 180 + R++E L ++ +S R HP +L+ R ++ + + I+ E NN+ + +R N Sbjct: 114 RALREKEALESDLLAASSAVRTSHPEFLIARWEEVFGPEATRILCEWNNEPADVHVRANG 173 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + L P +P A+++E P G VQD S Sbjct: 174 LRVTVGELLRSSTS----AMPSPVHPLAIKVEHIPP----SWIAMGLCYVQDPSTLLSCD 225 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKAT- 298 LAPQ GE +LD CAAPGGKTT++ ++ + +++A D+ + R++R+ +NLKRLG+ Sbjct: 226 LLAPQPGETVLDACAAPGGKTTYLAQLMHDQGRIIACDLYDSRVARLRENLKRLGVTIAR 285 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + D FDRIL+DAPCS TGVIRR D++W + D + Q +L Sbjct: 286 AIRHDCMQAGPPLDPDSFDRILVDAPCSNTGVIRRRVDVRWRLTEEDFIRMPAQQLALLR 345 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEG 418 LK GGTLVY+TCS+ PEEN L ++ E+ ++ LP + Sbjct: 346 RTATLLKPGGTLVYSTCSLEPEENDLLVEKVCAAIPSLRFVES-------RRALPFVDRI 398 Query: 419 DGFFYAKLIK 428 DG F AK ++ Sbjct: 399 DGAFAAKFVR 408 >UniRef50_C5V0U6 Sun protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0U6_9PROT Length = 421 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 181/428 (42%), Positives = 252/428 (58%), Gaps = 14/428 (3%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWL 61 N++ A Q V+QV+E G++L+ +L ++ + +A LQ+L +G LR QL+ + Sbjct: 2 HNIQLAATQIVQQVMEDGRNLNQVLDESLRRKSVWTPAQRAALQDLSYGTLRFYGQLNAI 61 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + L+ + MT + YL++V LYQL Y+R HA + V A + P+++GL+N + Sbjct: 62 LELLLHKHMT--DHRISYLLLVALYQLQYSRAAQHAVVDHAVRSADILN-PKIRGLVNAI 118 Query: 122 LRQFQRQQEELLAEFN-ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 LR F R Q +LL + + Y HP W + L+ Y + +I+ A N PPM LR+N Sbjct: 119 LRNFLRNQADLLTQAALKDEGHYSHPQWWIDELRAQYGDAADAILIAGNGHPPMTLRVNA 178 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 S +LA L + +A++LE P V LPGF DG V+VQDA AQ Sbjct: 179 QRGSTPDYLAQLAAQDIPARLIG--AEALQLEKPVSVDKLPGFFDGLVSVQDAGAQYAAR 236 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 L + G +LD CAAPGGKT HILE A + +++A+D D RLSRV +NL+RL + A + Sbjct: 237 LLDAKAGMRVLDACAAPGGKTAHILERA-DVELLALDKDAARLSRVKENLQRLTLNAALL 295 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 GD PS W + F+RIL D PCSATGV+RRHPDIKWLRR +D+ A+ Q EIL+A+ Sbjct: 296 TGDAASPSDWWDGRLFERILADVPCSATGVVRRHPDIKWLRRKKDLASFAEQQFEILNAL 355 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 WP L GG L+YATCSV +EN + FL +T A+ +TG P G LP +E DG Sbjct: 356 WPLLAPGGLLLYATCSVFKQENQQVVDKFLAQTPAAQQRDTGLP---GGMLLPD-DEHDG 411 Query: 421 FFYAKLIK 428 FFYA L K Sbjct: 412 FFYALLQK 419 >UniRef50_B9Y7F7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7F7_9FIRM Length = 412 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 121/432 (28%), Positives = 194/432 (44%), Gaps = 29/432 (6%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R A Q + ++ +GQ + L Q +S+++K + + +GVLR L W Sbjct: 2 NTTRKRAWQGLNAILNEGQYANLWLRQHGQTLSEEEKRWVTAVIYGVLRHREPLRWQWRD 61 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRI-PPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L+ + +V L+ + +YQL Y +A + + VE K KGL+N VLR Sbjct: 62 LVR---NVPEPSVAVLLDMSVYQLFYLDKGAEYAIVNDAVELCPRSK----KGLVNAVLR 114 Query: 124 QFQRQQEELLAE---FNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRIN 179 Q R+ + L + HP WLL+ + Y E+ + I A+ + + +RIN Sbjct: 115 QLLRRGPKPLPKPESIADLALVTSHPQWLLQLWKAHYGEEKMRRIALADLEEAAVSVRIN 174 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 SR++ + + T + P ++G + +QD S+Q Sbjct: 175 PLKLSREALAQR---PDWALESNGW-----TIRTAGNPVSDPWLKEGKIVIQDRSSQQVA 226 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L P+ + + D C+APG KTT + + ++A D+ RL+ V + +R G Sbjct: 227 LMLDPKPNDTVFDACSAPGTKTTQLAAMMNNEGSILACDLHAHRLALVEEAAQRCGATII 286 Query: 299 VK-QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 D Q +QFDR+LLD PCS GV+R P+I + E+ LQ+ IL Sbjct: 287 QTRTLDAAQADQQLAGRQFDRVLLDVPCSGLGVLRHKPEILLRLTPDSLDEIVALQAAIL 346 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 P K GGTLVY+TC++ +EN Q+ AFL + + EL T P Sbjct: 347 SHCAPLCKPGGTLVYSTCTLNRKENDKQVAAFLLQHPEFELMAEQT-------IFPDEGA 399 Query: 418 GDGFFYAKLIKK 429 DGF+ AK+ ++ Sbjct: 400 QDGFYIAKMTRR 411 >UniRef50_B7J3C2 Sun protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J3C2_ACIF2 Length = 434 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 166/422 (39%), Positives = 240/422 (56%), Gaps = 10/422 (2%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +R A + V + GQ++ L P+ ++ D+A LQ L G LR + L KL+ Sbjct: 19 VRKAAITVLRGV-DSGQTVDAALLPV--SLTGTDRATLQWLVLGTLREFLSVQALSAKLL 75 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 +P + + +L+ + L++L + + P A + + VE A+K+P +GL+N VLR++ Sbjct: 76 RKPWREEDADLGFLLSLALFELRHGQRPAFAVVNDWVEMTEAVKKPWARGLMNAVLRRYL 135 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRD 186 R++E L D HP+WL RL+ AYP+ W +I ANN PP+WLR+N Sbjct: 136 REREVLDTALVDRDL--GHPAWLAARLRAAYPQDWPAIAAANNSAPPLWLRVNTQRVDPG 193 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 ++ LL E G + A+ L PV LPG++ GWV VQD +AQ LAP+ Sbjct: 194 AYRRLLAEQGREAEGVTWSAAALCLPASVPVATLPGWDAGWVAVQDGAAQLAAHILAPRE 253 Query: 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 GE ILD CAAPGGKT H+ + ++ A+D +RL+RV + L+R G + ++ D Sbjct: 254 GERILDACAAPGGKTAHLWALGAT-RLDALDRSAERLNRVRETLERQGGEVHLQAADAAE 312 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 + W + +D ILLDAPC+ TGVIRRHPDI+ R+ D+ E Q+ +L+ +WP L+ Sbjct: 313 TATWWNGETYDAILLDAPCTGTGVIRRHPDIRLRRQPEDVAEAVAQQARLLEGLWPCLRP 372 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 GG L+YATCSVLPEEN QI AF+QR +DA Q LPG E+ DGF+YA L Sbjct: 373 GGRLLYATCSVLPEENEEQIAAFVQRHSDARRMAHPLTG----QRLPGQEDMDGFYYALL 428 Query: 427 IK 428 K Sbjct: 429 EK 430 >UniRef50_C7H5H8 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Faecalibacterium prausnitzii RepID=C7H5H8_9FIRM Length = 440 Score = 395 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 111/424 (26%), Positives = 181/424 (42%), Gaps = 17/424 (4%) Query: 20 EQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV 77 EQ + +L + K+ +DKA + + VL LD+++ + + + + V Sbjct: 17 EQDGFSNLVLDAELRRQKLEGRDKAFAGAIFYTVLEHQGTLDFILEQFLPKGLARLDPQV 76 Query: 78 HYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR---QFQRQQEELLA 134 ++ L Q Y ++P AA+ E V+ K+ GL+N VLR + + Sbjct: 77 REILRAALAQARYMQVPVSAAVNEAVKLTRTFKKASASGLVNAVLRKACNYDLETARFRN 136 Query: 135 EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDE 194 E + + L+ YPE+ I+ LR N + L E Sbjct: 137 ETQRLMVLGSAGQDVAEFLRTHYPEEALGILTHTADGGCTSLRANCLKMDAAALCEKLLE 196 Query: 195 AGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLC 254 +G+K P +V + P F++G V+ ++Q + + G+ ++DLC Sbjct: 197 SGVKSAQPGLVPGSVLAKFEGSPAEHPLFKEGCFHVEGQASQLAALCVEAKPGDTVIDLC 256 Query: 255 AAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCG 312 AAPGGKT + E+ + + + D+ E R+ + ++R+G T D P+ Sbjct: 257 AAPGGKTLLLAEEMQGQGALYSCDVAEHRVGLIRSAVERMGFAHVTALCNDATRPNPKLP 316 Query: 313 EQQFDRILLDAPCSATGVIRRHPDIKWL-RRDRDIPELAQLQSEILDAIWPHLKTGGTLV 371 DRIL+DAPCS G++ + PDI++ EL QS ILD LK GG LV Sbjct: 317 A--ADRILVDAPCSGLGILAKKPDIRYKTLEKARHDELLATQSSILDTAAALLKAGGRLV 374 Query: 372 YATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQN-------LPGAEEGDGFFYA 424 Y+TC++ P EN Q+ AFL R + + G +P DGFF Sbjct: 375 YSTCTIDPAENEEQVAAFLARHPEFRVVRPAVAFPDGMTVGEHGALSVPTRTGMDGFFLC 434 Query: 425 KLIK 428 + K Sbjct: 435 AMQK 438 >UniRef50_Q651X9 Os09g0477900 protein n=3 Tax=Magnoliophyta RepID=Q651X9_ORYSJ Length = 570 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 122/464 (26%), Positives = 213/464 (45%), Gaps = 44/464 (9%) Query: 8 RSMAAQAVEQVVEQGQSLSNI------------------LPPLQQKVSDKDKALLQELCF 49 R++AA + ++ + + + L + + ++D L+ + Sbjct: 105 RAVAAVRLLRIEKGKAFVDLLNEKGNSSGENEMSYVERTLGFSIRCLDNRDIRLVTVIVA 164 Query: 50 GVLRTLSQLDWLINKLM--ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAI 107 G +R LD+LI L + + + ++ +G +++L +P +AA+ E V A Sbjct: 165 GTVRWKRYLDYLIMSLCSEEKVFREMEPLLLQILRIGFFEILKLNVPAYAAVDENVRLAK 224 Query: 108 AIKRPQLKGLINGVLRQFQRQQE-----------ELLAEFNASDARYLHPSWLLKRLQKA 156 RP L+N +LR+ +E + A+ A Y HP W+++R + Sbjct: 225 VALRPGAGNLVNAILRKLLLLKEANSLPLPKIEGDDRAQARALSIIYSHPVWMVRRWIRF 284 Query: 157 YP-EQWQSIVEANNQRPPMWLRINRTHH-SRDSWLALLDEAGMKGFPHADYPDAVRLETP 214 E+ +++ NN P +R+N + +R + L+ + E Sbjct: 285 LGKEEALKLMKWNNSDPHFSIRVNTANGYTRADLIDRLESLQVHYEKSTMDEFVRIQEGM 344 Query: 215 APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQV 273 V ++G VQD SA ++ + PQ GE I+D CAAPGGKT + ++ + ++ Sbjct: 345 QTVLQAGLLKEGMCAVQDESAGLVVSVVDPQPGETIIDCCAAPGGKTLFMAARLSGQGKI 404 Query: 274 VAVDIDEQRLSRVYDNLKRLGMKATV--KQGDGRYPSQWCGEQQFDRILLDAPCSATGVI 331 A+DI++ RL + + K + A + D R ++ FD++LLDAPCS GV+ Sbjct: 405 WALDINKGRLRILMEAAKLHNLDAMISDIHADLRLYAKET-TATFDKVLLDAPCSGLGVL 463 Query: 332 RRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ 391 + D++W R+ D+ EL LQ E+LD+ +K GG LVY+TCS+ PEEN +I AF+Q Sbjct: 464 SKRADLRWNRQFEDLEELMCLQDELLDSASMLVKPGGILVYSTCSIDPEENEHRIAAFVQ 523 Query: 392 RTADAELCETG-------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 R D L ++ + P DG F A+L++ Sbjct: 524 RHPDFVLQSVHGYVPAEFVTDEGFYSSSPTKHSIDGAFAARLVR 567 >UniRef50_A1KRE7 SUN-family protein n=32 Tax=Neisseriaceae RepID=A1KRE7_NEIMF Length = 419 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 170/427 (39%), Positives = 244/427 (57%), Gaps = 19/427 (4%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPP---LQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 + +AA ++ V +G++L ++L ++ ++ LQ++ +G R L L ++ Sbjct: 6 AQKLAADSIAAV-AEGRNLQDVLAQIRTAHPDLTAQENGALQDIAYGCQRYLGSLKHMLA 64 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 +++ +P+ + L++ LYQL YTR PHA + E VE I R Q + N +LR Sbjct: 65 QMLKKPID--NPQLESLLLAALYQLHYTRNAPHAVVNEAVESIAKIGRGQYRSFANAILR 122 Query: 124 QFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 +F R++++L A D ++ P W + L+ YP+ W +I A PPM LR+NR H Sbjct: 123 RFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKHWHNITAALQSHPPMTLRVNRRH 182 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 + +S+L L G+ +Y AV LE PV+ LPGF DG V+VQD AQ L Sbjct: 183 GNAESYLEKLAAEGIPARALDEY--AVTLEEAVPVNRLPGFSDGIVSVQDFGAQQAAYLL 240 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQ 301 P++GE ILD CAAPGGKT HILE+A + +V A+DID RL RV DN+ RLG A+ Sbjct: 241 NPKDGERILDACAAPGGKTGHILELA-DCRVTALDIDAGRLKRVEDNIARLGFQTASAAC 299 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 D R + W + FD IL D PC+A+GV RR+PD+KWLRR D + A+ Q +LDA+W Sbjct: 300 ADARDLAAWYDGKPFDAILADVPCTASGVARRNPDVKWLRRPTDALKTARQQEALLDALW 359 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 LK GG ++ ATCSV EEN Q++ FL R ADAE E+ LP + DGF Sbjct: 360 QTLKQGGRMLLATCSVFVEENDGQLQKFLNRHADAEPIESRV-------LLPNKHQ-DGF 411 Query: 422 FYAKLIK 428 +YA + K Sbjct: 412 YYALIQK 418 >UniRef50_B9GFY0 Predicted protein n=6 Tax=Spermatophyta RepID=B9GFY0_POPTR Length = 527 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 123/465 (26%), Positives = 210/465 (45%), Gaps = 45/465 (9%) Query: 8 RSMAAQAVEQVVEQGQSLSNI------------------LPPLQQKVSDKDKALLQELCF 49 R+++A + ++ G + L + + D+D L+ ++ Sbjct: 62 RAVSAVRLMRIEMGGAFADLLNDKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVG 121 Query: 50 GVLRTLSQLDWLINKLMA--RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAI 107 G +R LD+LI L + + + ++ +G Y+++ +P +A + E V A Sbjct: 122 GTIRWRRYLDYLIGSLCHDEKAFRSMEPLLLQILRIGFYEIVKLDMPSYAVVDENVRLAK 181 Query: 108 AIKRPQLKGLINGVLRQFQRQQE-----------ELLAEFNASDARYLHPSWLLKRLQKA 156 RP ++NG+LR+ +E + A+ A Y HP W+++R K Sbjct: 182 VSLRPGAGNMVNGILRKLVLLKESNSLPLPKLEGDDRAQARALATLYSHPVWMVRRWTKL 241 Query: 157 YP-EQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGMKGFPHADYPDAVRLETP 214 E+ ++ NN P LR N +R + + + VR++T Sbjct: 242 LGQEKAIKLMMWNNDNPSFSLRANSGKGVTRADLVMQFNMLKVPHELSLHLDHFVRVKTG 301 Query: 215 APVHALPGF-EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQ 272 + G + G VQD SA ++ + PQ G+ I+D CAAPGGKT ++ + Sbjct: 302 LQIVIQAGLLKQGLCAVQDESAGLIVSVVNPQPGDSIIDCCAAPGGKTLYMASQMHGQGM 361 Query: 273 VVAVDIDEQRLSRVYDNLKRLGMKATVKQ--GDGRYPSQWCGEQQFDRILLDAPCSATGV 330 + A+DI++ RL V + K + + D R ++ + D++LLDAPCS GV Sbjct: 362 LYAIDINKGRLRIVKETAKLHQVDGVITTIPSDLRTFAESYQLKS-DKVLLDAPCSGLGV 420 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 + + D++W RR D+ EL +LQ E+LDA +K GG LVY+TCS+ PEEN ++ AFL Sbjct: 421 LSKRADLRWNRRLEDLEELKKLQEELLDAASILVKPGGVLVYSTCSIDPEENEERVDAFL 480 Query: 391 QRTADAELCETG-------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 R + + ++ + P DG F A+LI+ Sbjct: 481 LRHPEFRIDPVDRYVPPDFVTKRGFYSSDPVKHSMDGAFAARLIR 525 >UniRef50_B9QVY4 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Alphaproteobacteria RepID=B9QVY4_9RHOB Length = 468 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 146/452 (32%), Positives = 224/452 (49%), Gaps = 43/452 (9%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPL-----QQKVSDKDKALLQELCFGVLRTLS 56 K R +AA + VV + + L L + ++ D+AL++ + LR Sbjct: 32 KPGFAARKVAADILGNVVHKKRPLDGELDMASGHSGFRALAANDRALVRAIAGAALRHRG 91 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LK 115 ++ ++ +L+ R + K V ++ V + Q+ + IP AA++ V+ A +R + K Sbjct: 92 EITEILGRLLDRDIPEKTGRVLDILHVAIAQMQFLDIPDRAAVSLAVDHASMDRRARPYK 151 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPM 174 GL+NGVLR+ R+++E+ ++ R P WL + Q AY E+ ++I +A+ + + Sbjct: 152 GLVNGVLRRLGRERDEITSDL--DAPRLNTPDWLWESWQAAYGEEGARAIAKAHEREAAL 209 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 L +W LD + +VRL V AL GFEDG VQDA+ Sbjct: 210 DL---TVKADAAAWAEKLDGVVVGA-------GSVRLTKKGAVDALEGFEDGAWWVQDAA 259 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 A L +G+ + DLCAAPGGKT + V A++ A+DI + RL R+ +N+ RLG Sbjct: 260 ASLPAKLLGDVSGKQVADLCAAPGGKTAQLAAVG--AEITAIDISKARLKRLAENMTRLG 317 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + T D R ++ E FD ILLDAPCSATG IRRHPD+ W+++ DI +L+++Q+ Sbjct: 318 LSVTTVAADLR---EFEPEVLFDAILLDAPCSATGTIRRHPDVPWIKKPYDIEKLSEIQT 374 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AELCETGTPEQPG----- 408 +LD + LK GG LVY TCS+ E Q +AFL+R D L E G Sbjct: 375 ALLDRVMSWLKPGGVLVYCTCSLERAEGEGQAEAFLERNKDRVSLVPVDASEIGGLAESV 434 Query: 409 -----KQNLPGAE--------EGDGFFYAKLI 427 + P DGFF A+ Sbjct: 435 TPEGYLRCRPDQSAGPETGLFGMDGFFAARFR 466 >UniRef50_C8R080 Sun protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R080_9DELT Length = 501 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 143/475 (30%), Positives = 215/475 (45%), Gaps = 54/475 (11%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL-QQKV--SDKDKALLQELCFGVLRTLSQLDWLIN 63 R +A + + Q +Q + L +L ++ +D+ L++ L + VLR LD ++ Sbjct: 18 PRQVALEILLQQEQQNRPLDQVLAEYPARRWPSDRRDRQLVRALVYEVLRRRGFLDHVVA 77 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRP-QLKGLINGV 121 + P+ + + +GL QLLY R+PP AA+ ET+ A ++P + G +NG+ Sbjct: 78 RYAKHPLAKMKPLTLAALRLGLAQLLYFDRLPPAAAIDETIRALKAARQPRWITGFVNGL 137 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINR 180 LR R++ ELL P+WL +R ++ E+ A NQ PP+ LR+N Sbjct: 138 LRNAARERAELLRLAAEQCDWLSVPAWLRQRREQQLGQERAYHRSRAENQPPPLVLRVNT 197 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCM 239 + + L G++ P A+RL + V LPGF +GW VQD +AQ Sbjct: 198 AKINCATLAEQLQHNGIEVEESTFAPAALRLPSYHGRVEELPGFNEGWFAVQDEAAQLVT 257 Query: 240 TWL----APQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLG 294 L P+ G LD CA GGKT H+ E+ P E+++VA++ R + + +NL RLG Sbjct: 258 MLLQKEPDPEPGALFLDACAGLGGKTAHLAELLPAESRLVALEPHTGRFALLAENLARLG 317 Query: 295 MK-------------------------------ATVKQGDGRYPSQWCGEQQFDRILLDA 323 K R F ILLDA Sbjct: 318 HKFFKLPPDGPPEELARRLQTAAAGKPAPLLLCPQTLASFARLLDSASVAPAFQGILLDA 377 Query: 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 PCS GV+RRHPDI+W R+ D+P + Q +LD L GG LVYA CS PEEN Sbjct: 378 PCSGLGVVRRHPDIRWNRQPEDLPRYCKQQIALLDQAAKLLAPGGVLVYAVCSNEPEENR 437 Query: 384 LQIKAFLQRTADAELCETG----------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 I+A R + E+ + ++ ++ P DGFF A+L + Sbjct: 438 EVIQALTSRHPELEVTDPRPWLPPPAATLVDDEGYLRSTP-ETGLDGFFAARLQR 491 >UniRef50_B3EF03 Sun protein n=11 Tax=Chlorobiaceae RepID=B3EF03_CHLL2 Length = 451 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 133/454 (29%), Positives = 194/454 (42%), Gaps = 32/454 (7%) Query: 1 MKKQRNL--RSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLS 56 M K+ ++ R +A + ++ + + L ++ D+AL EL GVLR Sbjct: 1 MTKKESMTSRELALKVLQNIESGEKKSGTALHEQLSHTSLNQNDRALATELVNGVLRRRL 60 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLK 115 LD I + + ++ +G YQL+Y RIP AA+ E+V A K + Sbjct: 61 TLDTFIGRYYHHRYEKAAPVLKNILRIGAYQLIYLDRIPHWAAVNESVSLARRYKGEHMA 120 Query: 116 GLINGVLRQF-------QRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEA 167 L+N VLR + E HP WLL+R Y E+ ++I+ Sbjct: 121 KLVNAVLRNITPETISADLDPSGKMKEIQRLSITASHPEWLLERWIARYGKERAEAILAY 180 Query: 168 NNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGW 227 NN+ P RIN + +LA + + + E + G Sbjct: 181 NNRTPLTGFRINPLKTTPQEFLATENSKTARIGKSGLENFFLSTEFSCY---ESAIKQGL 237 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRV 286 +TVQ+ + PQ G +LDLCAAPGGK+T E+ + AVD+ Q+L ++ Sbjct: 238 LTVQNPTQGLACLLCDPQPGSTLLDLCAAPGGKSTFCGELMQNTGNITAVDLYSQKLQKL 297 Query: 287 YDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 ++ LG+ + D R ILLDAPCS TGV+ R +++W Sbjct: 298 SEHAGELGITIISTAEADARTYLPEQPPA---VILLDAPCSGTGVLARRAELRWKLTSET 354 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET--GT 403 I ELA LQ E+LD L GTL+YATCS+ P+EN QI+AFL R + Sbjct: 355 ITELALLQVELLDHAASLLAENGTLLYATCSIEPKENEQQIEAFLIRHPEFMRDPASGAL 414 Query: 404 PEQPG--------KQNLPGAE-EGDGFFYAKLIK 428 PE LPG DG F +L K Sbjct: 415 PEPFASKAVPNGTLLTLPGEHEGFDGGFAQRLKK 448 >UniRef50_Q1IIS1 Sun protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIS1_ACIBL Length = 432 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 127/447 (28%), Positives = 200/447 (44%), Gaps = 34/447 (7%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNIL-PPLQQKVSDKDKALLQELCFGVLRTLSQLD 59 M K R+ A + +V S +L +S D+ L EL G LR S LD Sbjct: 1 MSKN-PSRATAFDILLRVERDQAFASELLHSDRLNDLSAPDRGLATELVMGTLRWQSTLD 59 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 L+ ++P+ V + + YQL + RIP +AA+ E+VE ++ Sbjct: 60 ALVATQSSQPLRKLDIEVLIALRLAAYQLQFLDRIPANAAVNESVELVKRARKRSAVPFA 119 Query: 119 NGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 N VLR+ + E+ + HP+WL+ R + Y + +SI + P LR Sbjct: 120 NAVLRKISKLPREIHGDLA-------HPAWLVARWRDNYGGDAAESISKYGQTTPETALR 172 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 + R A L E G++ P A RL + + F+ G V +QD ++Q Sbjct: 173 LPFDAEKRAKVEAELQENGVELAPGRLLNAARRLVSG-DLSGTAAFQRGDVWIQDEASQL 231 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 +G+ ILD CAAPGGKT+ + E P +++VA+++ EQR + + ++ + Sbjct: 232 VALLTG--HGDRILDCCAAPGGKTSVLAERNPSSKIVALELHEQRARLLRERVRASNVD- 288 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 V+ D E FD +L D PCS TG + R+P+IKW + D+ +L Q Q IL Sbjct: 289 -VQTADATNFRA---ETAFDCVLADVPCSGTGTLARNPEIKWRLKPEDLADLQQRQIAIL 344 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE------------ 405 A L GG LVY+TCS+ PEE ++A L + + + Sbjct: 345 RAALSQLAPGGRLVYSTCSLEPEEGEAVVEASLTDEFELQPAAPELEQFAPAFAIPDPQT 404 Query: 406 ---QPGKQNLPGAEEGDGFFYAKLIKK 429 P + +PG +GFF A + ++ Sbjct: 405 LVRGPYLRTIPGIHPCEGFFAAVITRR 431 >UniRef50_A6BZY6 Sun protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZY6_9PLAN Length = 477 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 132/457 (28%), Positives = 215/457 (47%), Gaps = 44/457 (9%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLI 62 R+ R +A +E+ Q +S+ + +++ +S D L E+ GV+R LD +I Sbjct: 31 RSARQLAFFLLEEYRRTDQFISDSMQQWERRIDLSSADWRLAMEISIGVVRRQLTLDTII 90 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGV 121 + RP + + L+ +G YQL+ IP HAA++ETVE A ++R + K ++N + Sbjct: 91 ESQLTRPREKVEAPLWTLLQIGAYQLVMLDQIPDHAAVSETVELAGKLQRVRWKKMVNAI 150 Query: 122 LRQFQRQ-----------------------------QEELLAEFNASDARYLHPSWLLKR 152 LR R + + P +++ Sbjct: 151 LRSISRLTADDIATEPQSNTIPLSADRYRSFSIGLFPNPIADPAGYLSKAFSFPLPVIRD 210 Query: 153 LQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 + +Q + + NQR ++LRIN R+ L L G++ P + P A+RL Sbjct: 211 WLTRFSVQQTMQMAQWFNQRNNLYLRINALQTGREQLLEELQAEGIQVSPGDE-PQAIRL 269 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PE 270 E P + L GF G T+QD SA L PQ E + D+CAAPG KTTH+ E+ Sbjct: 270 EEPVAMENLVGFSAGKFTIQDQSAMAAGNLLNPQPEETVWDMCAAPGTKTTHLAELMYNR 329 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 ++A D+ RL ++ N RLG+ P + +QFD IL+DAPCS +GV Sbjct: 330 GTLIATDVSCDRLEKIEQNASRLGLTCIETHL-VNQPDEIWSTKQFDAILVDAPCSNSGV 388 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 + + P+ +W + + EL Q+Q ++L+ + HLK+ G LVY+TCS P EN ++ L Sbjct: 389 LGKRPEARWRLDEVSLKELNQIQRDLLEQAFQHLKSSGRLVYSTCSFDPRENEDLLQDVL 448 Query: 391 QRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLI 427 + + +L ++LPG+ DG + A + Sbjct: 449 RDHPERKLVREN-------RHLPGSP-CDGGYQALIE 477 >UniRef50_C5X355 Putative uncharacterized protein Sb02g027560 n=1 Tax=Sorghum bicolor RepID=C5X355_SORBI Length = 574 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 121/465 (26%), Positives = 217/465 (46%), Gaps = 46/465 (9%) Query: 8 RSMAAQAVEQVVEQGQSLSNI------------------LPPLQQKVSDKDKALLQELCF 49 R++A + ++ + + + L + + D+D L+ + Sbjct: 109 RAVAVVRLLRIEKGKAFVDLLNEKANDSGEKEIGYVERTLGFSTRYLDDRDIRLVTVIVA 168 Query: 50 GVLRTLSQLDWLINKLM--ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAI 107 G +R LD+LI L + + + ++ +G +++L +P +AA+ E V+ A Sbjct: 169 GTVRWKRYLDYLIMSLCSEEKVFREMEPLLLQILRIGFFEILKLDVPAYAAVDENVKLAK 228 Query: 108 AIKRPQLKGLINGVLRQFQRQQE-----------ELLAEFNASDARYLHPSWLLKRLQKA 156 RP ++N +LR+ +E + A+ A Y HP W+++R + Sbjct: 229 VALRPGAGNMVNAILRKLVLLKETDSLPLPKIEGDDRAQARALSIIYSHPVWMVRRWIRF 288 Query: 157 YP-EQWQSIVEANNQRPPMWLRINRTHH-SRDSWLALLDEAGMKGFPHADYPDAVRLETP 214 + ++ ++ NN P LR+N + +R + L+ + VR++ Sbjct: 289 HGKDEALRLMNWNNSDPHFSLRVNTSKGYTRADLVKRLESLQVHYEES-VMDGFVRIQEG 347 Query: 215 AP-VHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQ 272 V +DG VQD SA ++ + PQ GE I+D CAAPGGKT + ++ E + Sbjct: 348 MQAVLQAGLLKDGICAVQDESAGLVVSVVDPQPGETIVDCCAAPGGKTLFMASRLSGEGK 407 Query: 273 VVAVDIDEQRLSRVYDNLKRLGMKATV--KQGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 + A+DI++ RL + D K G+ + D R ++ ++D++LLDAPCS GV Sbjct: 408 IQALDINKGRLRILMDAAKLHGLDDIITDIHADLRLYAKET-TAKYDKVLLDAPCSGLGV 466 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 + + D++W R+ D+ EL LQ E+LD+ ++ GG L+Y+TCS+ PEEN +I AF+ Sbjct: 467 LSKRADLRWNRQFEDLEELICLQDELLDSASMLVRPGGILIYSTCSIDPEENEKRIAAFV 526 Query: 391 QRTADAEL------CETG-TPEQPGKQNLPGAEEGDGFFYAKLIK 428 QR + T ++ + P DG F A+L++ Sbjct: 527 QRHPEFAPQSVCGYVPTEFITDEGFYSSNPTKHSMDGAFAARLVR 571 >UniRef50_C1A605 Putative rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A605_GEMAT Length = 428 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 110/431 (25%), Positives = 183/431 (42%), Gaps = 29/431 (6%) Query: 19 VEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVH 78 + G L + +D+ +QEL +GVLR +LD ++ + ++ V Sbjct: 1 MRAGHMLDQSFERRTPTLDARDRRWVQELVWGVLRHRERLDAILATRIRGGLSVLDDGVL 60 Query: 79 YLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL----- 132 ++ +G YQLL +PP+AA+ ++VE L+N VLR+ R++ + Sbjct: 61 DILRLGTYQLLSMDSVPPYAAIGQSVEAVKRKHGIGAGKLVNAVLRRIDRERATIEPALP 120 Query: 133 LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLAL 191 +A ++ HPSW++ R + + ++ NN P+ +R D+ Sbjct: 121 ADPVDALALQHSHPSWVVGRWVSQFGIAETAQLLALNNTPAPVVVR--PHGVQADALAES 178 Query: 192 LDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHIL 251 L ++ + P+++ + P + + F G VQD +A + G + Sbjct: 179 LTQSDVSTRRVPLVPESLEITGPVALTEVDAFRRGQFYVQDPAATLVAQYAHVPEGSVVA 238 Query: 252 DLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-------ATVKQGDG 304 DLCAAPG K + A V+A D E R+ R+ RLG+ D Sbjct: 239 DLCAAPGSKALEMARRAR--LVIAADRSESRVDRMRSGFDRLGIDTTSSNRAMVTLVADA 296 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 PS D +L+D PC+ TG RRHPD +W + D L LQ +IL A + Sbjct: 297 TQPS----IDPVDAVLVDVPCTGTGTFRRHPDARWRLQASDFAVLGALQRQILTAAAAVV 352 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-------EQPGKQNLPGAEE 417 + G L+Y+TCS+ EEN + AFL D + ++ + LP Sbjct: 353 RPNGLLIYSTCSLEAEENDEVVDAFLASHPDFVVEPPPAGVVSDAVIDRGRLRVLPQQHG 412 Query: 418 GDGFFYAKLIK 428 DG F ++ + Sbjct: 413 FDGAFAVRMRR 423 >UniRef50_Q2S463 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S463_SALRD Length = 427 Score = 390 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 130/410 (31%), Positives = 192/410 (46%), Gaps = 16/410 (3%) Query: 35 KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIP 94 + + +EL GV R LD+++ + + + ++ +GLY+LL+ P Sbjct: 15 DADARTRRQARELVAGVTRQRRWLDFVLGEAYHGDYDSMEHRLQEILRLGLYELLFQSTP 74 Query: 95 PHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEF-----NASDARYLHPSWL 149 HAA+ E VE A RP L+NGVLR R +E + N RY HP+W+ Sbjct: 75 THAAVDEYVELAKQALRPGAGNLVNGVLRTIDRDREHIPTPDTGDDANDLALRYSHPTWM 134 Query: 150 LKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDA 208 ++R + ++ ++ ANN+RP +RIN S A LDE + Sbjct: 135 VQRWLDRFGLDETTELLRANNRRPMYSVRINPLRTSEADVAAWLDEHDVVNVDSPYLDRY 194 Query: 209 VRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA 268 +RL+ + A +DG V VQD SA + L PQ GE ++D CAAPGGK H Sbjct: 195 LRLKRLQALIAGDLLDDGHVAVQDESAGLVVQLLDPQPGETLIDGCAAPGGKAMHAAARM 254 Query: 269 -PEAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 + AVD DEQRL RV + G + D R + Q DR+LLD PC Sbjct: 255 EGTGTIYAVDRDEQRLERVETAAEAQGASEMVEAETADLRAWAARPEPPQGDRVLLDVPC 314 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 + GV+ + ++W R D+ E+A+LQ E+LDA ++ GG LVY+TC+ PEEN + Sbjct: 315 TGMGVLAKRAGLRWRRSMEDLEEMAELQDELLDAAAQLVRPGGLLVYSTCTTEPEENERR 374 Query: 386 IKAFLQRTADAELCETG-------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 ++AFL R + + P DG F A+L + Sbjct: 375 VEAFLARHDGFAVESAEGHVPDEMVSDAGFLATFPHRHRMDGAFAARLRR 424 >UniRef50_Q14PA1 Putative ribosomal rna small subunit methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PA1_SPICI Length = 423 Score = 390 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 115/436 (26%), Positives = 209/436 (47%), Gaps = 30/436 (6%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVS---DKDKALLQELCFGVLRTLSQLDWLIN 63 R +A + ++ + + +++L + ++ D+DK L+ + +G L+ L+++ N Sbjct: 3 AREVAWNILWKIFAKNKFSNHLLSNIVEQNDNFIDQDKTLIYRIVYGTLKNKLYLEYIAN 62 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + + + + L+ + +YQ + RIP +A + E V + ++ P+ G IN L Sbjct: 63 QFIES--KKTNQKLQILLWMSIYQFRFLDRIPNYAIVNEAVNISKSVS-PKYAGFINTTL 119 Query: 123 RQFQRQQEEL-----LAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWL 176 ++ ++E+ E +Y PS L L+ Y E + ++ + P + Sbjct: 120 KKIFDSKDEIFEINIADETKKLSIKYSFPSSLYLILRNEYSEDIARQVMIDSLTIPKLSF 179 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 R+N SRD L+ V + PV F+ G + +QD + Sbjct: 180 RVNTLKISRDELLSKYSN--YNLTKSLVSSVGVIADK--PVVNSEMFKKGLIFIQDEMSM 235 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGM 295 L PQ + +LD+C+APGGK TH+ ++ + + A DI E++++ + N RLG+ Sbjct: 236 RIAEILDPQETDRVLDMCSAPGGKATHLSQIINNKGIIDAYDISEKKINLIKMNASRLGI 295 Query: 296 KATV-KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL-RRDRDIPELAQLQ 353 D R + Q+D+IL DAPCS GVI+R P+IK+ ++++ L ++Q Sbjct: 296 TNIYPHLLDARKINSEI---QYDKILCDAPCSGLGVIKRKPEIKYHTLTNQELANLVEIQ 352 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLP 413 ++L+ + LK GG LVY+TC+ EN +QI+ FL + +D ++ T Q Sbjct: 353 EQLLEKAYQLLKPGGILVYSTCTFGGYENIVQIRNFLAKHSDLKIITTE-------QIFG 405 Query: 414 GAEEGDGFFYAKLIKK 429 DGF+Y K+ KK Sbjct: 406 YENNTDGFYYCKIRKK 421 >UniRef50_C5NYN0 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN0_9BACL Length = 441 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 109/443 (24%), Positives = 190/443 (42%), Gaps = 25/443 (5%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDW 60 N R +A + + ++++ + L KV ++DK + E+ +G ++ L+ Sbjct: 2 SNINARHIAYEVLYTIIQEDGYSNITLNKYFNQYKVEEQDKRFISEVVYGSIKNKLYLEH 61 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLIN 119 ++ + V ++++ +YQLLY + P A + E V+ I +N Sbjct: 62 ILKSYSKGRVK---PKVKVILLMSIYQLLYMDKTPNFAVIDEAVKLGKKIAGNITGKFVN 118 Query: 120 GVLRQFQRQQEELLAEF----NASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 G+LR +R L ++ PS L L+ Y E+ Q IV + N++ Sbjct: 119 GILRNIERNASNLDLKYKNATEKFCIENSCPSELYNILKIQYGVEKAQKIVISFNEKSKN 178 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 +R N ++ + L G D++ L F G+ VQD + Sbjct: 179 SIRYNPLKITKKDLIEKL---GSAVSESEICEDSLVLNKLN--LDSSLFTKGYYIVQDEA 233 Query: 235 AQGCMTW--LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 + + L ILD CAAPGGK+ HI + +++ D +L + DN ++ Sbjct: 234 SALVASSIGLPIDKKYKILDTCAAPGGKSLHIASKYFNSSLISCDKYIHKLKLIEDNKEK 293 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 LG+ + + +FD ++ D PCS GVI+ P+IK+ + + ++A+L Sbjct: 294 LGITNIEVKEQDATLNNTSFNNKFDIVICDVPCSGIGVIKNKPEIKYKITNSYVEDIAKL 353 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-------E 405 Q ++LD ++K G L+Y+TC++ EN I+ FL+ D L E Sbjct: 354 QYDVLDNSKHYVKQEGILMYSTCTIDKRENIKNIEKFLKENKDFSLESISLKNSIVKTRE 413 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 + LP DGFF AKL K Sbjct: 414 NGVLEILPDEYSCDGFFIAKLKK 436 >UniRef50_B7CB38 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB38_9FIRM Length = 397 Score = 389 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 113/425 (26%), Positives = 193/425 (45%), Gaps = 32/425 (7%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R +A+++VV + + L +V +KD+AL + +G ++ +K + Sbjct: 2 RKWIWKALDEVVNKDVYSNLYLRNHLHEVDEKDRALATRIFYGTIQNYRYCKACWSKYVK 61 Query: 68 RPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 + L+ + YQLL+ ++P +A + + V A I + GL N VL + + Sbjct: 62 ---NKLNPKMDVLLTMSTYQLLFLDKVPSYAIVNDAVNIAKKINM-KYAGLTNAVLHKVK 117 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSR 185 E + +Y P WL K Y E+ + +A+ PM++R N + Sbjct: 118 ------PIETDNMALKYSLPDWLYKMWTSQYGQEKALVMAKASVNILPMYVRRNVLNT-- 169 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQ 245 +E+ DA+ + ++ G+++ QD + ++ PQ Sbjct: 170 -------NESDFDLDMFVRVQDALYIYKGNDYFHHDYYQKGYMSAQDEGSFEIAKFVDPQ 222 Query: 246 NGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 E ILD CAAPG K+ + E+ + + A D+ R + ++ KRLG+ + Sbjct: 223 ENERILDCCAAPGTKSMAMAEMMHNKGHIDAYDLHAHRKDLIENDAKRLGID--IIHAGV 280 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 + +++ +DRIL D PCS GV+ R PDIK D+ L LQ IL+ + ++ Sbjct: 281 QDATEFKSSNMYDRILCDVPCSGYGVLSRKPDIKLHMVPEDMDTLIPLQYSILNNVCQYV 340 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYA 424 K GGTLVY+TC++ +EN QI+ FL+ + L E T Q DGF+ A Sbjct: 341 KVGGTLVYSTCTMNKKENEKQIEKFLKAHKEFSLVEEKTIFSNATQ--------DGFYMA 392 Query: 425 KLIKK 429 KL++K Sbjct: 393 KLVRK 397 >UniRef50_C8PZ41 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZ41_9GAMM Length = 450 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 160/454 (35%), Positives = 239/454 (52%), Gaps = 33/454 (7%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 + Q N R+ +E++ +QG+SLS++L PL +VS+KDK EL G LR L Sbjct: 4 LHSQLNTRAKVVATLERI-QQGESLSSLLDPLLNQVSEKDKGFAHELLLGTLRQWWALAR 62 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 + L+ +T + V + +GLYQLLY P +AA+ ETVE + + GLIN Sbjct: 63 IGESLIEHEVT--DKGVWAALNIGLYQLLYMDTPDYAAIGETVEAVKQLDKGYGAGLINA 120 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 +LR+ Q+ + + + + P+WL K+L++ + E + + +A Q P++LR+NR Sbjct: 121 ILRKVQKNPAKFAKKIEKN---HSLPNWLAKQLKQDWGEYYAELGQALRQPAPIFLRVNR 177 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPD---AVRLETPAPVHALPGFEDGWVTVQDASAQG 237 S + + +L + G+ + + ++L + LP F +GWV+VQD AQ Sbjct: 178 KFCSVEDYADILTQQGIGFALVSIGFEKVQTIQLTDAIRITDLPKFAEGWVSVQDRHAQL 237 Query: 238 CMTWLA---PQNGEHILDLCAAPGGKTTHILEV----------APEAQVVAVDIDEQRLS 284 LA +LD C APGGK H+LE+ A V+A+D DE+RL Sbjct: 238 SAHILASLALDKSLTVLDACTAPGGKLAHLLELDESKTFHVKHQNIAHVIALDNDEKRLQ 297 Query: 285 RVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRR 342 RV NL+RL + D + + QFD I+LDAPC+ATGVIRRHPDI LR Sbjct: 298 RVSQNLERLQLNQENVQLVCDDAT--TFQADTQFDVIVLDAPCTATGVIRRHPDIALLRT 355 Query: 343 DRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG 402 ++D+ + A LQ+ IL W +L T G L+Y TCS+L EN Q++AFL A++ + Sbjct: 356 EQDVGQTAALQARILANCWHNLATNGYLLYITCSMLKAENENQLQAFLATHKAAQIVDFS 415 Query: 403 TPEQP------GKQNLP-GAEEGDGFFYAKLIKK 429 G Q LP +GDGF+YA L K+ Sbjct: 416 LNLPNQIKQNIGYQCLPLHQNDGDGFYYALLQKR 449 >UniRef50_B6JAF7 SUN protein n=6 Tax=Alphaproteobacteria RepID=B6JAF7_OLICO Length = 446 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 145/451 (32%), Positives = 210/451 (46%), Gaps = 43/451 (9%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLSQ 57 R +AA ++ V+ + ++L + L P + +SD+D+AL++ L VLR Sbjct: 13 PGLAARRIAADIIDGVLHKRRTLDDQLEGAAQHPALKSLSDRDRALMRRLVATVLRRRGT 72 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP-QLKG 116 L +L+++L+ R + +M+G Q+L+ +P HAA+ +V A +R + G Sbjct: 73 LAYLLSRLLDRGVPSDAPRAQSALMIGAAQILWMDVPDHAAVDLSVRLVQADRRAAKYAG 132 Query: 117 LINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMW 175 L+N VLR+ R+ L+ E P WL R KAY E +++ A PP+ Sbjct: 133 LVNAVLRRCAREGIPLIDESTDEMI--DLPPWLATRWIKAYGEDTARAMARAIGHEPPLD 190 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 L ++W L + VR V LPGF +G VQDA+A Sbjct: 191 L---TVKSDSENWATRLHGETLPT-------GTVRTLLHGSVTMLPGFSEGAWWVQDAAA 240 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM 295 G+ + DLCAAPGGKT + + A+V AVD RL+R+ +N RLG+ Sbjct: 241 ALPARLFGDIAGKPVADLCAAPGGKTAQLAQAG--AKVTAVDRSAGRLARLKENFARLGL 298 Query: 296 KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 +AT D FD ILLDAPC ATG IRRHPD+ WL+ + D+ L+ LQ+ Sbjct: 299 EATYVAADATE----WEAGPFDAILLDAPCMATGTIRRHPDVAWLKNEADLDALSALQAR 354 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL--- 412 +L LK GGTLVY TCS+ PEE I A L+ + E G L Sbjct: 355 LLRKSVTLLKPGGTLVYCTCSLEPEEGEQAIAALLEAEPQMKRRPVEASELAGLSELISP 414 Query: 413 ---------------PGAEEGDGFFYAKLIK 428 P DGF+ A+L+K Sbjct: 415 MGDVRTLPCHLQHDDPKLSGLDGFYAARLVK 445 >UniRef50_Q8TGY3 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGY3_METKA Length = 450 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 107/446 (23%), Positives = 198/446 (44%), Gaps = 23/446 (5%) Query: 2 KKQRNLRSMAAQAVEQVVEQG--QSLSNILPPLQQKVSDKDKALLQE-LCFGVLRTLSQL 58 K + + + + Q ++ ++ + L + VL+ L Sbjct: 7 KTYEEAVEIVLRTLVKAERIKPTQYARRLVMKEMN--PSREARSVSAGLLYSVLQKRGLL 64 Query: 59 DWLINKLMARPMT--GKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKG 116 D +I ++ V + + ++++ P + P Sbjct: 65 DEVIEDVLEITDDVTELDTWVRNAARIAVNEVVFEDGDPDEVADVLHGLVRRLANPGAAA 124 Query: 117 LINGV---LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE--QWQSIVEANNQR 171 ++ L+ + + E E + Y HP WL++R + + + + +++EANN+R Sbjct: 125 IVKAFTLDLKDY--EPPEPEDELDRLKWEYYHPRWLIERWMEMFGDPDEVVALLEANNRR 182 Query: 172 PPMWLRINRTHHSRDSWLALLDEAG-MKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 PP+ +R+N + L + P + +++ P+ +P +E+G + Sbjct: 183 PPLTIRVNTLKVDPEELAERLQRKYRVTVEPGRFLDEILKIPEGLPIGEMPEWEEGLFVI 242 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDN 289 QD +A L P+ GE ++DLCAAPGGKTTH+ ++ E ++VA+D+DE R+ R+ + Sbjct: 243 QDEAAALASAVLNPKPGEVVVDLCAAPGGKTTHMAQLMGGEGKIVAIDVDEVRMERLREI 302 Query: 290 LKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 +R+G+ DGR + G + D +L+D PCSA G I ++P+ +W ++ Sbjct: 303 AERMGVLDCIETHLMDGREAPEKLGREFADAVLVDPPCSADGTIPKNPERRWRITPDELE 362 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET-----G 402 L + Q E+L A +K GG L+Y+TCS+ PEE+ ++ FL + EL E G Sbjct: 363 RLPKFQYELLKAGAEMVKPGGRLLYSTCSMFPEEDEEVVRRFLDEHPEFELLEVKVGDQG 422 Query: 403 TPEQPGKQNLPGAEEGDGFFYAKLIK 428 + P E GFF A + + Sbjct: 423 FDMPEACRLFPHRHETCGFFIALMGR 448 >UniRef50_UPI000174635C RsmB n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174635C Length = 414 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 142/431 (32%), Positives = 217/431 (50%), Gaps = 32/431 (7%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 N R +A Q + + ++++ ++ +D ALLQ L G LR + LD + Sbjct: 7 NSRQLALQILVEWERSEIYAADLIEKAAATHRLDHRDTALLQTLVMGTLRNIDLLDIWLE 66 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 ++ + +VH+L+ +G+ QLL +P HA + ETV A +GL+N VLR Sbjct: 67 RVCDN--QHLETSVHWLLRLGIAQLLLLEMPAHAVVNETVNQAGK-----ARGLVNAVLR 119 Query: 124 QFQRQQEELLAEFNASDA--RYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINR 180 + R++ LLA + R HPSWL +R K + + +++ E + Q ++R+N+ Sbjct: 120 RVDRERIPLLARMDRLPIAERTSHPSWLAERWTKQFGKSAAEALCEWDQQPASTYVRVNQ 179 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 H + E + P + P R +T G QD S Sbjct: 180 LHPQPLT-----PEEVLPLEPISF-PGFFRADTLPR----EWLASGRCYAQDPSTVIACD 229 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-AT 298 LAPQ GE ILD CAAPGGK+ ++ + + + +++ D +RL R+ NL+RL + A Sbjct: 230 LLAPQPGETILDACAAPGGKSAYLAQKMQNQGRILTCDSVPRRLQRMQQNLERLNVTIAE 289 Query: 299 VKQGDGRYP-SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 +Q D P Q DRILLDAPCS TGV+RR D++W E+AQLQ++IL Sbjct: 290 NRQVDWTKPLPPIWKGVQVDRILLDAPCSNTGVMRRRVDVRWRLDPEVFVEMAQLQTKIL 349 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEE 417 + P LK+GG+LVY+TCS+ EEN I +FL + +L ET + +LP + Sbjct: 350 STLSPLLKSGGSLVYSTCSLDREENEDIIASFLVAHPEFKLVET-------RSSLPWRDG 402 Query: 418 GDGFFYAKLIK 428 DG F A L+K Sbjct: 403 FDGAFAALLLK 413 >UniRef50_D2UG22 Putative trna and rrna cytosine-c5-methylase protein n=1 Tax=Xanthomonas albilineans RepID=D2UG22_XANAL Length = 437 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 167/417 (40%), Positives = 239/417 (57%), Gaps = 13/417 (3%) Query: 19 VEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTV 77 +++G+SL L + +D+AL++ +CF VLR + + + + + + + Sbjct: 25 IDRGRSLKAELAAALPGLPDARDRALVEAICFAVLRRRPAYEAALRLWLQKQLPQRDAEL 84 Query: 78 HYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFN 137 L++ G QL + PHAAL+ TVE A++RP+ GL+N +LR+ R Sbjct: 85 RALLLAGFAQLDVLGLAPHAALSATVEATRALERPRQAGLVNALLRRALRDG------LP 138 Query: 138 ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGM 197 A P WL + +PEQ ++I A+ Q P+WLR+NR +R ++L L +AG+ Sbjct: 139 EVPADAGWPLWLRDAVCADWPEQAEAIFAASQQPAPLWLRVNRQRGTRATYLQALADAGI 198 Query: 198 KGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAP 257 + DAV L P V ALPGF +GWV+VQDASAQ LAP G +LD CAAP Sbjct: 199 AAQAASALADAVCLHVPMAVSALPGFAEGWVSVQDASAQQVADVLAPAPGARVLDACAAP 258 Query: 258 GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--GMKATVKQGDGRYPSQWCGEQQ 315 GGK+ H+LE P + A+D+D +RL RV + +R+ G +A ++ D P W Sbjct: 259 GGKSAHLLERDPTLCLTALDVDARRLQRVRETFERIGSGTQARLQVADAAQPQTWWDGVP 318 Query: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 FD +LLDAPCSATG++RR PD+ RR D+ L LQ+ +LDA W L+ GG LVYATC Sbjct: 319 FDAVLLDAPCSATGIVRRQPDVLLHRRGEDLIALQALQARLLDAGWQVLRPGGVLVYATC 378 Query: 376 SVLPEENSLQIKAFLQRTADAELCET----GTPEQPGKQNLPGAEEGDGFFYAKLIK 428 S+L +EN+ Q++A L R ADA L + G P G+Q LPG + DGFFYA+L K Sbjct: 379 SLLQDENARQLQALLARHADAALEDPGAACGHPSGGGRQRLPGEQHADGFFYARLRK 435 >UniRef50_Q6AS22 Related to SUN protein (FMU protein) n=1 Tax=Desulfotalea psychrophila RepID=Q6AS22_DESPS Length = 454 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 159/454 (35%), Positives = 234/454 (51%), Gaps = 28/454 (6%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQL 58 MK + R +AA+ + QV ++ Q + IL L Q++++ ++++L + FGVLR L Sbjct: 1 MKT--SSRYIAAETLCQVYKKQQPVKPILEKLCQQKQLNPRERSLAMNMVFGVLRKRQYL 58 Query: 59 DWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIK-RPQLKG 116 D L+ KL + VH + VGLYQL + IP A + E V K +L G Sbjct: 59 DILLRKLSTVRLKKLDPFVHQALTVGLYQLFFLDSIPESAIVNEAVNSCKTAKVHKRLHG 118 Query: 117 LINGVLRQFQRQQEELLAEFNASDAR-YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 +NG+LR RQ+E L + + PS L KR Q+ + E+ + I E N + PP+ Sbjct: 119 FVNGILRNATRQKEALANGMKEQEQEIHTTPSGLFKRWQERFGLEKARYICEINGEEPPL 178 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDA 233 LR+N T S D + ALL G+ G P+++ +E + +PG++DG VQD+ Sbjct: 179 TLRVNSTKTSIDDFEALLTREGITGTRGP-APESLIIEDYQGLIGDIPGYKDGLFQVQDS 237 Query: 234 SAQGCMTWLAP-QNGEHILDLCAAPGGKTTHILEVA--PEAQVVAVDIDEQRLSRVYDNL 290 +AQ L P ++G H LD CA GGKT+HI+++ E +V+AV+ D +R + N+ Sbjct: 238 AAQLASLLLLPIKSGGHYLDACAGLGGKTSHIIQLGADKEIKVIAVEPDAKRKEKFITNI 297 Query: 291 KRLGMKATVKQGD-GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 +RL V+ + Q FD IL+DAPCS TGVIRR PDI+W R++ D + Sbjct: 298 ERLFTHHEVELHPTSLQEFKASNTQAFDGILVDAPCSGTGVIRRQPDIRWNRKEEDFLQK 357 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG--TPEQP 407 +Q EIL L G LVYATCS+ EEN IK FL D L + PE+ Sbjct: 358 QIIQLEILSLAAEMLAPTGILVYATCSLEIEENEDLIKKFLLLFPDFYLTDCQNYLPEEV 417 Query: 408 GKQNLPGAEE------------GDGFFYAKLIKK 429 G+ P + DGFF A+L ++ Sbjct: 418 GEHIRPAKDGDGSFFAPLPSKRLDGFFAARLARR 451 >UniRef50_D0WMY6 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMY6_9ACTO Length = 534 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 125/456 (27%), Positives = 200/456 (43%), Gaps = 38/456 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILP--PLQQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A + + V E + +LP + ++ D A LC+G LR + D +I++ Sbjct: 69 ARLVAFEVLRAVDEDDAYANLVLPVEIARAGLNKLDAAYATNLCYGTLRMRGRWDAIISR 128 Query: 65 LMA-RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 R + V L+ +G QLL PPHAA+ ETV A G +N VLR Sbjct: 129 CAKGRRIYDIDPPVLDLLRMGCEQLLAMETPPHAAIHETVVIARNFFGQGTGGFVNAVLR 188 Query: 124 QFQRQQEELLA--------EFNASDARYLHPSWLLKRLQKAYP------EQWQSIVEANN 169 + + + + HP W+++ L+++ + +S++ A+N Sbjct: 189 RISEKAGQWPEIVRSSTASRTEFLSLWHSHPRWIVEALEESLEASGRSRDDVESVLAAHN 248 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 + L S ++ ++ A M+ FP P+AV L H L DG Sbjct: 249 APAKVALVARA--ISPEALAERVEAAKMEAFPGYLMPNAVLL-GRGDPHRLHPVRDGLAG 305 Query: 230 VQDASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEV--APEAQVVAVDIDEQRL 283 VQD +Q A E LD+CA PGGKT + + A++ A + E RL Sbjct: 306 VQDEGSQLIAALFAAAPIEGKDELWLDMCAGPGGKTATLAAIAQGRGARIHANEPQEHRL 365 Query: 284 SRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 V +++ ++ GDGR + +DR+L+DAPCS G +RR P+ +W + Sbjct: 366 DLVAASVEPWEDTVALRLGDGRELGTQEPDA-YDRVLVDAPCSGLGALRRRPEARWRKDP 424 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG- 402 +DIP LA+LQ ++L + + L+ GG LVY+TCS E ++ FL A+L + G Sbjct: 425 KDIPGLAKLQRQLLASAFKALRPGGALVYSTCSPALAETRDVVRDFLAAHGRAKLLDAGE 484 Query: 403 ----------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 + Q A+ DG F A + K Sbjct: 485 VANRVAIRDVSARDGMVQLWADADCTDGMFIALITK 520 >UniRef50_Q1NQ57 Fmu, rRNA SAM-dependent methyltransferase n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ57_9DELT Length = 487 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 146/486 (30%), Positives = 214/486 (44%), Gaps = 60/486 (12%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M N+R +A Q + + GQ + +L ++ +D+ LL+ L +GVLR Sbjct: 1 MTPTANIRQVALQLLLAQEQSGQPVEQLLEHQLREHPLADGRDRRLLEALVYGVLRWRGL 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRP-QLK 115 LD ++ P+ + + +G+ QLL R+P AA+ ET++ A ++P L Sbjct: 61 LDQVVAGYARHPLAKMKPLTLAALRLGILQLLILERLPASAAINETIKALRAARQPRWLT 120 Query: 116 GLINGVLRQFQRQQEELLAEF-----------------------NASDARYLHPSWLLKR 152 G +N VLR+ E L + A A HP WL +R Sbjct: 121 GFVNAVLRKAAADIERLGRQQYLAGLVAEGTAPTGQYASPDPLPMAVAAWLSHPPWLRQR 180 Query: 153 LQKAYPEQ-WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 ++ Y + + + NN PP+ LR+N + LA L +AG+ P AV L Sbjct: 181 WEQRYGLELCRELCHINNCLPPLVLRVNLHRLTASELLAQLQKAGIAATAGDYAPAAVVL 240 Query: 212 E-TPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP- 269 V LPG+ GW VQD +AQ LA H LD CA GGKT H+ E+ P Sbjct: 241 PPGSGRVEDLPGYALGWFAVQDEAAQLVTMLLAGAGPGHYLDACAGLGGKTAHLAELLPP 300 Query: 270 EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW------------------- 310 EA + A++ +R + NL RLG+ A + QG+ Sbjct: 301 EATITALEPQSRRALLLTANLHRLGVTARLIQGELAAHLPAAELEAAGASHDKKGDTIPS 360 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 + IL+DAPCS GVIRRHPDI+W RR ++ + Q E+L L+ GG L Sbjct: 361 PFLGFYRGILVDAPCSGLGVIRRHPDIRWNRRAAELKNYQRRQLELLSTAAELLQPGGVL 420 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAELCETG---------TPEQPGKQNLPGAEEGDGF 421 VY CS PEEN I+ L+R + L ++LP ++ DGF Sbjct: 421 VYVVCSFEPEENEEVIQLLLKRRPELRLSAPAPYLPVAARQLVRGDFFRSLP-SDGLDGF 479 Query: 422 FYAKLI 427 F A+L+ Sbjct: 480 FAARLV 485 >UniRef50_UPI0000E87C3C sun; rRNA methylase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C3C Length = 423 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 144/424 (33%), Positives = 231/424 (54%), Gaps = 13/424 (3%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDK-DKALLQELCFGVLRTLSQLDWLINKLMARP 69 AA ++ V++ G +L ++ + + D ++ ++ + +G LR + Q ++LI KL+ Sbjct: 8 AAIIIDGVLD-GNNLDHVFEKILKNPDDSVQQSQVKAITYGTLRYMGQSNYLIGKLIKNK 66 Query: 70 MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ 129 + R + LI V +YQL + + V A I + L+N VLR F R + Sbjct: 67 IE--NRVLESLIHVAIYQLTQEAHTDFTVVDQAVRAAKKIDFRK-SNLVNAVLRTFLRNK 123 Query: 130 EELLAEFN-ASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSW 188 E+L+ F S+++Y +P W + ++++ Y E W+ ++ N PPM +R+N+ + + + Sbjct: 124 EKLIQGFAGQSESKYNYPLWWVDKMKEQYVEHWEDVLRIGNVHPPMTIRVNKKKITVEKY 183 Query: 189 LALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGE 248 +L + + +A+ ++TP V +PGF +G+ +VQD AQ +L ++G Sbjct: 184 SDILRSNNINHVLI--HGNALIIDTPINVMDVPGFVEGYFSVQDYGAQLASEYLDLEDGH 241 Query: 249 HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS 308 +LD CAAPGGKTT ILE + + ++V+++ + R R+ +NL RLG++A V + + Sbjct: 242 WVLDACAAPGGKTTSILE-SHDVRLVSLEKNPLRALRIEENLLRLGLQAKVIKEPLDNDN 300 Query: 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGG 368 +W Q FDRILLD PCSA+G++RRH DIKWLRR D + Q E+L+ WP LK G Sbjct: 301 KWWDRQAFDRILLDVPCSASGIVRRHIDIKWLRRPSDFVNYGKSQLELLNNAWPLLKKNG 360 Query: 369 TLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG---KQNLPGAEEGDGFFYAK 425 L+Y TCSV EEN I AF + DA + PE Q LP DG +Y Sbjct: 361 KLLYVTCSVFQEENCDVIAAFCENHKDAIRGDIKFPEHVVSMKNQMLPSKH-HDGLYYEI 419 Query: 426 LIKK 429 L K Sbjct: 420 LEKN 423 >UniRef50_Q9LK54 Similarity to SUN and FMU proteins n=3 Tax=Embryophyta RepID=Q9LK54_ARATH Length = 531 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 119/459 (25%), Positives = 204/459 (44%), Gaps = 47/459 (10%) Query: 15 VEQVVEQGQSLSNILPPLQQKVSD-------KDKAL------------LQELCFGVLRTL 55 + ++ G +L + + + ++ G +R Sbjct: 73 LMRIEYGGAFAD-LLNEKGKGSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGTIRWR 131 Query: 56 SQLDWLINKLMA--RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ 113 LD LI L R + + ++ +G+Y+++ +PP+A + E V A RP Sbjct: 132 RYLDHLIGSLCHNERTFRNMEPLLLQILRIGVYEIIKRDMPPYAVVDENVRLAKVALRPG 191 Query: 114 LKGLINGVLRQFQRQQEELLAEF-----------NASDARYLHPSWLLKRLQKAYP-EQW 161 +NG+LR+ +E+ A + HP W+++R K ++ Sbjct: 192 AGDFVNGILRKLVSLKEKDALPLPKVEGDDRAQARALATLHSHPVWMVRRWVKYLGLDEA 251 Query: 162 QSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAP-VHA 219 ++ NN P LR N +R + L+ + + VR++T V Sbjct: 252 TKLMIWNNNDPGFSLRANTGRDITRADLVERLNSLKVPHELSLHLEEFVRIKTGLQTVVQ 311 Query: 220 LPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDI 278 ++G +VQD SA ++ + PQ GE I+D CAAPGGKT + + + + A+D+ Sbjct: 312 AGLLKEGICSVQDESAGLIVSVVKPQPGERIMDACAAPGGKTLFMASCLKGQGMIYAMDV 371 Query: 279 DEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPD 336 +E RL + + K + T D R ++ E Q+D++LLDAPCS GV+ + D Sbjct: 372 NEGRLRILGETAKSHQVDGLITTIHSDLRVFAE-TNEVQYDKVLLDAPCSGLGVLSKRAD 430 Query: 337 IKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA 396 ++W R+ D+ EL +LQ E+LD+ +K GG LVY+TCS+ PEEN +++AFL R + Sbjct: 431 LRWNRKLEDMLELTKLQDELLDSASKLVKHGGVLVYSTCSIDPEENEGRVEAFLLRHPEF 490 Query: 397 ELCETG-------TPEQPGKQNLPGAEEGDGFFYAKLIK 428 + Q + P DG F A+L++ Sbjct: 491 TIDPVTSFVPSSFVTSQGFFLSNPVKHSLDGAFAARLVR 529 >UniRef50_A4U1B3 Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p:Antitermination protein NusB n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1B3_9PROT Length = 437 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 135/444 (30%), Positives = 203/444 (45%), Gaps = 34/444 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLD 59 + + RS+ +E V+ Q + L L + K++++D+A + L LR L Q+D Sbjct: 9 SRTADPRSIVLDLLECVLAQKRLLDETLDSEPRLTKLAERDRAFTRMLVATTLRRLGQID 68 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I + + RP+ K V ++ +G QLL+ PPHAA++ TV+ A LIN Sbjct: 69 AVIARCIDRPLPAKAGRVRNMLRLGAAQLLFLDTPPHAAISTTVDLAKNSPLAGFAKLIN 128 Query: 120 GVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVE-ANNQRPPMWLRI 178 VLR+ R+ +AE +A P+W+ + Y ++ A+ P+ + + Sbjct: 129 AVLRRLDREGRAWVAEQDAGPL--NTPAWMWQSWLDTYGPDTARLIAQAHQTEAPVDISV 186 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 W L+ M +R + V LPGF +G VQD +A Sbjct: 187 ---AGDPALWAERLEADIMPT-------GTLRRQAGGDVTQLPGFAEGAWWVQDLAASLP 236 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 + G+ + DLCAAPGGK + EA+V AVD +R+ R NL+RL + AT Sbjct: 237 AKLMGAVKGKRVADLCAAPGGKALQLA--VAEAEVTAVDRSAKRMVRFRRNLERLKLAAT 294 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + + D + W FD +LLDAPC+ATG +RRHPD L+ D+ LA Q +L Sbjct: 295 IVETD---VAGWQPPAPFDAVLLDAPCTATGTLRRHPDGVHLKGPGDVAYLADQQHALLK 351 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK--------- 409 A +K GG LVY CS+ P+E QI L+ A E PG Sbjct: 352 AAAAMVKPGGILVYCVCSLEPQEGEAQIIRLLESGAPLVRDPIEPSEIPGLDFVLTKQGE 411 Query: 410 -QNLPG----AEEGDGFFYAKLIK 428 + LP D FF A+L + Sbjct: 412 IRTLPHYLAEKGGMDAFFIARLKR 435 >UniRef50_Q21DD2 Fmu (Sun) n=13 Tax=Rhizobiales RepID=Q21DD2_RHOPB Length = 450 Score = 375 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 138/451 (30%), Positives = 215/451 (47%), Gaps = 40/451 (8%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPL-----QQKVSDKDKALLQELCFGVLRTLSQ 57 R +AA ++ V+ + ++L + L + +SD+D+AL++ L +LR L Sbjct: 13 PGLAARRIAADILDGVLHKHRTLDDQLEGAAAHPGLKTLSDRDRALMRRLVATILRRLGT 72 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP-QLKG 116 L ++++++ R + +++G Q+L+ +P HAA+ +V + +R + G Sbjct: 73 LGHVLSRMLDRGLPTDAPRAQSALLIGAAQILWMEVPDHAAVDLSVRLVQSDRRAAKYAG 132 Query: 117 LINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 L+N VLR+ R+ + L+ E P WLL R Y + ++I A + P + Sbjct: 133 LVNAVLRRCAREGQPLIDEVQGQSL--DVPPWLLARWSAHYGADTARAIARAIGEEPSLD 190 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 L + ++W + L + VR V LPGF+DG VQDA+A Sbjct: 191 LSV---KSDAEAWASRLHGEVLPT-------GTVRTLLQGSVKMLPGFDDGQWWVQDAAA 240 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM 295 G+ + DLCAAPGGKT + A V A+D + R++R+ +NL RLG+ Sbjct: 241 ALPARLFGDLTGKSVADLCAAPGGKTAQLCNAG--AWVTAIDRSQSRVARLRENLGRLGL 298 Query: 296 KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 A D G+ FD +LLDAPCS+TG IRRHPD+ WL+++ DI LA Q Sbjct: 299 PAETAVADAAEWPGNGGDG-FDAVLLDAPCSSTGTIRRHPDVAWLKQEADIGALAAQQQR 357 Query: 356 ILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK------ 409 +L LK GGTLVY TCS+ PEE + I A L + + E G Sbjct: 358 LLHKAVSLLKPGGTLVYCTCSLEPEEGEVAIAALLAGNSGMRRAPVDSSEVAGLGDLITP 417 Query: 410 --------QNLPGAE----EGDGFFYAKLIK 428 +LP + DGF+ A+L+K Sbjct: 418 DGALRTLPCHLPHPDPRLGGLDGFYAARLVK 448 >UniRef50_B2SFT3 tRNA and rRNA cytosine-C5-methylase, sun protein n=17 Tax=Francisella RepID=B2SFT3_FRATM Length = 426 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 147/433 (33%), Positives = 227/433 (52%), Gaps = 20/433 (4%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVS--DKDKALLQELCFGVLRTLSQLDWLIN 63 N R++AA+ + +++ SL + K++ ++DK+ ++ LC+ R L+ +I Sbjct: 2 NTRAIAAKTILDILDNKYSL-LTIEQKLVKLNLLEQDKSFIKLLCYEFFRHYYSLEKIIA 60 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + + + LIM+G Q+ + P +A + ETV +K K L+N +LR Sbjct: 61 LYLTQ---KTKVKAKVLIMLGALQIFEIKQPYYATINETVAACKVLKIIWAKKLVNRILR 117 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHH 183 + R E++ + + P WL L+K YP I +A N + M++R+N+ Sbjct: 118 EMTRNIEDITS-IYTQNKAIDMPEWLCDTLKKQYPNDHLVIAQAINAKADMFIRLNQNK- 175 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 L D+ + + D ++L+ V F+ G+ T+QD SAQ + Sbjct: 176 DNKKVLDYFDKNNIGYS-FTNLKDCIKLDQAIDVKYNQPFQQGYFTIQDISAQYAGHIIK 234 Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--GMKATVKQ 301 N + ILD CAAPGGKT+HILE AP+A + A+DI ++RL + +NL+RL V + Sbjct: 235 AANNDKILDACAAPGGKTSHILECAPQADITAIDIIDKRLELLRENLERLSENHNVNVFK 294 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 D P +F++I+LDAPCSA G IRR+PDIK LR DI + LQS+IL +W Sbjct: 295 HDLTLPLA----GKFNKIILDAPCSALGTIRRNPDIKVLRTPNDIQAIKSLQSKILANLW 350 Query: 362 -PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ----PGKQNLPGAE 416 +L G L+Y TCS+L EEN QIK FL + +AE+ E E+ G Q LP + Sbjct: 351 NNNLTDNGYLLYITCSILAEENQQQIKEFLAKNNNAEIIEIDILEKYKTSYGYQLLPSQQ 410 Query: 417 EGDGFFYAKLIKK 429 +GDGF+Y L K Sbjct: 411 DGDGFYYCLLKKN 423 >UniRef50_C1ZLP1 Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLP1_PLALI Length = 754 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 133/463 (28%), Positives = 206/463 (44%), Gaps = 50/463 (10%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLI 62 R R +A +E + + + + +S D+ L EL G++R S L L+ Sbjct: 301 RTARELAFNVLEAHHAGNKHIGEVFDQAVDRTTLSPSDRRLAYELICGIVRRQSTLQALL 360 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQL-LYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 L+ R M +R + +I +GLYQ+ L IP HAA+ ETVE A G +NGV Sbjct: 361 MSLVHRQMETLERPLQTIIKIGLYQIFLCQGIPQHAAVHETVELAKRANLRW-GGFVNGV 419 Query: 122 LRQFQ-----------------------RQQEELLAEFNAS------DARYLHPSWLLKR 152 LR R+ L A + P L++R Sbjct: 420 LRSAIQLMTENILTAPSSKALPIGHHQYRELTTDLFPSPTLTPGSYIAAAFSFPHDLVER 479 Query: 153 LQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL 211 Y E + NQ LR+N R+++ L A P+ +RL Sbjct: 480 WVGQYGVEATIRMAFWFNQVTETALRVNLLKTDRETFRQKLFAADFVAEAGD-LPETIRL 538 Query: 212 ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PE 270 + + LPGF +G +VQD SAQ L PQ GE +LDLCAAPG KT H+ E+ + Sbjct: 539 LSTVRISTLPGFPEGEFSVQDLSAQHAARRLNPQPGEVVLDLCAAPGSKTCHMAELMQNQ 598 Query: 271 AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGV 330 +++A D R+ +VY+N +RLG+ G + +FD++L D PCS TGV Sbjct: 599 GEIIAADTHGGRIRQVYENAERLGLSIIRTITIGPR-GENLPSMEFDKVLADVPCSNTGV 657 Query: 331 IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL 390 + + P+ +W + EL ++Q+ IL ++ GG ++Y+TCS+ P EN ++ FL Sbjct: 658 LGKRPEARWKYSPAHLDELREMQATILRTAAGKVRIGGRILYSTCSIEPLENEEIVQQFL 717 Query: 391 QRT-----ADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 T L E ++ +PG+ DG + A + + Sbjct: 718 AATSEAGGPQFRLVE-------EQKFMPGSP-ADGAYQALIER 752 >UniRef50_C2HH21 Possible rRNA SAM-dependent methyltransferase RmsB n=2 Tax=Finegoldia magna RepID=C2HH21_PEPMA Length = 423 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 104/409 (25%), Positives = 188/409 (45%), Gaps = 10/409 (2%) Query: 24 SLSNILPPL-QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIM 82 S +L + +D A ++ F + +D++I+K + + V ++ Sbjct: 20 YSSELLKTYDYGDLDKRDIAYIKRCVFTEIENRFFIDYVISKCSDLELNKLDKIVLEILR 79 Query: 83 VGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDAR 142 + ++L+ + +A + E VE A + K +N VLR+ R L E + + Sbjct: 80 MATTEILFMKTADYAVVDEAVELANNL--THYKDYVNAVLREVCR--INLDEEDLGDEIK 135 Query: 143 YLHPSWLLKRLQKAYPEQWQS-IVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFP 201 + LLK L K+Y ++ ++++ + ++ N+ + + L+ G Sbjct: 136 FSINKELLKMLNKSYSKKTVKKLLKSFFYKSDFVIKQNKLKEN--NLKTNLENQGFVLEE 193 Query: 202 HADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKT 261 H D+ + P + F++G +QD S C L P +LD+CAAPG K+ Sbjct: 194 HPFLKDSFIVRNPESIIDTNEFKEGKFIIQDGSCSLCAEVLEPMENSVVLDICAAPGSKS 253 Query: 262 THILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRIL 320 +I E+ + + DI+ ++ R+ +N+ + G++ Q +FDRIL Sbjct: 254 CNIQELTNNQSIIYCNDINNNKIDRIKENVYKCGVENVQYLNFDANILQEGLINKFDRIL 313 Query: 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE 380 +DAPCSATGVI ++P+IK R +D+ L + Q IL+ +LK GG LVY+TCS+L E Sbjct: 314 VDAPCSATGVINKNPEIKLFRTKKDVENLVETQRRILENCEKYLKKGGVLVYSTCSLLKE 373 Query: 381 ENSLQIKAFLQR-TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 EN + + E + + + +P + GFF +K +K Sbjct: 374 ENEENVDYIEDKLNLKREDIDFYGDKNEFIKLMPFQKGTQGFFISKFVK 422 >UniRef50_A7IBA4 Sun protein n=6 Tax=Rhizobiales RepID=A7IBA4_XANP2 Length = 471 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 146/448 (32%), Positives = 208/448 (46%), Gaps = 39/448 (8%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 R +A +EQV+ G +L + L + +D+AL + LR + L L Sbjct: 42 TPGLAARILAVDGLEQVLRHGAALEDALDADVA-LDPRDRALAYRILATSLRRIGTLRAL 100 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLKGLING 120 I KLM R + + +++ G Q+L+ +P HAA+ V+ A A + GL+N Sbjct: 101 IAKLMERGLPKSAPRLESVLLAGATQILFMDVPNHAAVGLCVDVARADRNTAGFAGLVNA 160 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 VLR+ R+ + L+ + A P W+ +R KAY E ++I + PP+ + Sbjct: 161 VLRRLTREADALMVGISPDFA--DTPEWMGQRWIKAYGLETTRAIAAMHKVEPPLDI--- 215 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 W L + +VR+ PV ALPGF +G VQDA+A Sbjct: 216 TVKADPALWAERLSGEVLPT-------GSVRILQAGPVRALPGFAEGDWWVQDAAAALPA 268 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L G + DLCAAPGGKT + A V AVD RL+R+ +NL+RL + A V Sbjct: 269 RLLGDVKGLKVADLCAAPGGKTAQLAAAG--AIVTAVDRSSSRLTRLKENLERLKLSAQV 326 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 GD S FD +LLDAPCSATG +RRHPDI +R D+ LA LQ+ ++ Sbjct: 327 VAGDAADFS----GGPFDAVLLDAPCSATGTLRRHPDIAVNKRPGDLVTLAGLQARLIAH 382 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK---------- 409 LK GGTLVY+TCS+ PEE Q++ L +D E G Sbjct: 383 AADLLKPGGTLVYSTCSLEPEEGEQQVERLLAARSDIIRAPIVPGEVEGIDPFITPQGDV 442 Query: 410 QNLP--------GAEEGDGFFYAKLIKK 429 + LP DGFF A+L ++ Sbjct: 443 RTLPSHWMRGEAERSGLDGFFAARLKRR 470 >UniRef50_D2MQI4 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI4_9FIRM Length = 404 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 108/426 (25%), Positives = 180/426 (42%), Gaps = 35/426 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R + +E V+ S L L+ + S + E+ +G LR L + Sbjct: 4 REAIVRILEHVLYDHAYASLSLKQLKIEGS---IGFVTEVVYGTLRHYKLLQEQYKPFVK 60 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF-- 125 + L+++ LYQ + ++P +A + TVE + Q KG +N VLR+ Sbjct: 61 KIKKKMD----VLLVMALYQHHFMKVPDYAIVNSTVELVKS----QEKGFVNAVLRKIFQ 112 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHS 184 E + RY HP WL++ Y + I+ N + ++ R N Sbjct: 113 SEWIEPMGNNPEDLAIRYSHPEWLIRLWLAQYGLNKTLEILAENQKPSKVYGRYNPFLAK 172 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 ++ G + + + + F + V VQD +Q + L Sbjct: 173 KEEL------TGFTFYENDCVSY------TGNLLSTEAFRNHKVLVQDRHSQMIVPQLDL 220 Query: 245 QNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 + G +LD CA+PG K+ I + + ++++ DI RL + + G K + Sbjct: 221 RRGLKVLDACASPGTKSQQIATYMCNDGEIISCDIYPHRLKLLDQLASQTGTKIIHSELQ 280 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 + +Q FDRILLD PCS G + P+I++ I E+ QLQS+IL+ + Sbjct: 281 DASCFRKDWQQAFDRILLDVPCSGLGDLSHKPEIRYHISPNSIDEIQQLQSKILEVNASY 340 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFY 423 LK G LVY+TC++ +EN QI+ FL + + L + + DGF+Y Sbjct: 341 LKEEGILVYSTCTLNQKENHKQIQQFLNQYEEFILEKE--------KTFFPKNGSDGFYY 392 Query: 424 AKLIKK 429 AKL +K Sbjct: 393 AKLRRK 398 >UniRef50_Q9V089 Sun/NOL1/NOP nucleolar protein n=3 Tax=Pyrococcus RepID=Q9V089_PYRAB Length = 450 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 98/444 (22%), Positives = 198/444 (44%), Gaps = 29/444 (6%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKD----KALLQELCFGVLRTLSQLDWLINK 64 + A A+ V E+ S + L + ++V KD + + F + + +++D+++N Sbjct: 11 EIIADALTLVEEKELSSKHALERIFKRVEGKDKETARGIAHAYVFEIEKWRAKIDFILNS 70 Query: 65 LMA-RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 ++ + + L+ +G +++ + + P A V N +LR Sbjct: 71 VLRGSKVEDLDLYLANLLRIGTFEMKFKGVNPAIATDSVVRVVKEKFDLTKAKFANAILR 130 Query: 124 QFQR-------QQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 + ++ ++ + R+ HP W ++ + ++ ++ +N + + Sbjct: 131 EVEKFNVEKALRKLKEKDRIEWLSVRFSHPRWYVEYIIDMLGYDEAVRLLLSNLRPQRYY 190 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R+N D L+E G++ L+ PV L G+ +QD ++ Sbjct: 191 VRVNTLKADIDKVRRYLEENGVRVALTPVDDVLKVLDYEKPVTRLEWHRKGYFVIQDLAS 250 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG 294 L P+ GE +LDL AAPG KT H + + ++VAVD RL ++ + +KRLG Sbjct: 251 AYVAHVLNPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRLMKMKERMKRLG 310 Query: 295 MKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 +K + DG+ + + F++I+LDAPCS++G R+ P++KW + I + +Q Sbjct: 311 VKNVKLVHADGQ---SFIDREGFEKIILDAPCSSSGTYRQFPEVKWRFDEEKIKRVISVQ 367 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP--------- 404 +L + +L++GG + Y+TCS+ +EN + L++ E+ + Sbjct: 368 RNMLLNAYRNLRSGGEMTYSTCSIRIDENEENVIFALEK--GFEIVDYPFEWGDKGFLEI 425 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIK 428 + + + + FF AKL K Sbjct: 426 GEKVFRAWTHKHDCNSFFIAKLRK 449 >UniRef50_C7GZX3 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZX3_9FIRM Length = 461 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 117/470 (24%), Positives = 220/470 (46%), Gaps = 56/470 (11%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 M+ R A A+ + E+G+ + + +S ++ A ++EL FG L+ +LD Sbjct: 4 METHDKKRLAAFWALYNI-EKGKYSNVAFEESTKGLSAREAAFVRELVFGTLKLNIKLDH 62 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLIN 119 +N L + + L+ +GLYQL Y +P +AA+ ET+ A + + ++ GLIN Sbjct: 63 AMNHLKDKKAR-IKLKDRILLRLGLYQLDYMDSVPDYAAVNETIAIAKKLVKNKV-GLIN 120 Query: 120 GVLRQFQRQQEELLAE------FNASDARYLHPSWLLKRLQKA----------------- 156 +LR + R+++E+ +Y +P W ++ + Sbjct: 121 AILRGYIRKRQEIEDSINDLSYIERLSVKYSYPLWFVREITNDEANNSCNKKLPANLSVQ 180 Query: 157 --------------YPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPH 202 Y + +S+++ N++ P+ +R N + + + ++E G++ P Sbjct: 181 KAINDRDTADQVPEYGAE-ESVLQCGNEKAPLCIRTNLKKITGEELVEKINELGIEALPG 239 Query: 203 ADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTT 262 A+ ++ + ++ G+ +VQD S+Q + L ++ +LDLC GGKT Sbjct: 240 R-AEGAINVKGSG-IFDTELYKKGYFSVQDESSQLAIEALDIKDC-KVLDLCCGRGGKTF 296 Query: 263 HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGE-QQFD---R 318 I+E +V+++D E ++ ++ D KRLG K + D + + +D Sbjct: 297 AIIEQCKNVEVISMDKYEHKILQLKDEAKRLGHKVNIGVNDLFDENNLDKHCRLYDTIKY 356 Query: 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 ++LD PC+ +G +RR P+IK+ D + +L +LQ +LD + LVY TCS+ Sbjct: 357 VILDVPCTGSGTVRRRPEIKYAGEDTKLADLVKLQRTLLDRGAELMNDEDHLVYMTCSIF 416 Query: 379 PEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 +EN I AFL+R ++ +L + +Q P + DGFF+A L + Sbjct: 417 QKENMDNIDAFLKRHSEFKLLQ-------YRQYTPEKDGTDGFFFADLKR 459 >UniRef50_D0LLT9 Sun protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLT9_HALO1 Length = 501 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 130/459 (28%), Positives = 198/459 (43%), Gaps = 38/459 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDWLINK 64 +R +A + + QV ++G + L + + +D+AL+ ELC+G LR +LD + Sbjct: 44 VRDVAHRVLRQVAKEGAFATLALGAALKSSGLDARDRALVTELCYGSLRQQMRLDRALAA 103 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 L R + ++ V Y++L+ R+P HA++ V A + + G NGVLR Sbjct: 104 LTPRGLGKLDAATLSILRVAAYEILFLERVPAHASVNSAVRAARRLGGQRFAGFANGVLR 163 Query: 124 QFQRQQEELLAEFNA----SDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRI 178 R+ E L + + P W+L L + P + V A NQ P+ LR Sbjct: 164 TLAREGEPALPPESEPRAHLAIAWSTPGWILDALSEMVPAAELSEAVAAFNQPAPLTLRA 223 Query: 179 NRTHHSRDSWLALLDEAGMK--GFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 S ++ L + P A+ E F +G VQD AQ Sbjct: 224 --HGVSVEALAERLRALHPQGGFSLSPLAPQALLAEGLGDPELSQAFAEGQFAVQDLGAQ 281 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLGM 295 LAP G +LD CA GGK+ H+ + PE +V A D +L + RLG Sbjct: 282 LAAHLLAPAAGARVLDACAGVGGKSAHLAALVGPEGRVDAADRSAGKLRLCAEGAARLGA 341 Query: 296 KATVKQG------DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 D +Q + +D +LLDAPCS GV+RRHP+ K + D+ E+ Sbjct: 342 DNVHTAALDLASDDAVAWAQAGLAEAYDAVLLDAPCSGMGVLRRHPEAKLRLQPGDVGEM 401 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG- 408 A LQ+ +LDA+ ++ GG LVY+ C+ E QI AFL R + L +P + G Sbjct: 402 AALQARLLDAVSARVRPGGVLVYSVCTFTRAEGPAQIAAFLDRRDEFALEAPPSPAESGV 461 Query: 409 ------------------KQNLPGAEEGDGFFYAKLIKK 429 + P DGFF A+L ++ Sbjct: 462 DWAAAGLTSEAAGAGAGTIRTWPHRHGADGFFLARLRRR 500 >UniRef50_C2BWI2 Ribosomal RNA small subunit methyltransferase B n=3 Tax=Mobiluncus RepID=C2BWI2_9ACTO Length = 523 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 110/464 (23%), Positives = 187/464 (40%), Gaps = 37/464 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLD 59 ++ R +A QA+ +V + + +LP L + ++ +D A EL +G LR + D Sbjct: 41 TRRDPARDVAFQALRRVDQDHAYANLVLPGLIERARLHRRDAAFATELVYGTLRLQGRYD 100 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I L R + + ++ +G++Q+L R+ +AA+ V+ A G++N Sbjct: 101 AIIGLLSDRDIAALDSELVTVLRMGIHQILQMRVEDYAAVDTMVDLARDRLSAGPAGMVN 160 Query: 120 GVLRQFQRQQEELLAEF--------NASDARYLHPSWLLKRLQKAY---PEQWQSI---V 165 VLR+ + A + +P W++ L+ A + + Sbjct: 161 AVLRKVTEHDLSYWLDAITSGLTGEKALSRAFSYPEWIVWALRDALVATGRDAGELPGLL 220 Query: 166 EANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFED 225 A N+ + L S D + + D + + L E Sbjct: 221 HAQNRPAYVTLCARPGLISADELATAAETYLDADTRLGELSDCAVVLSGGDPRRLRAVER 280 Query: 226 GWVTVQDASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEVAP--EAQVVAVDID 279 G V+D +Q LA +DLCA PGGKT + +A + V+A ++ Sbjct: 281 GLAGVEDEGSQLVAKVLAAAPVTGVERTWVDLCAGPGGKTALLAGLARSRDVSVIANEVS 340 Query: 280 EQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIK 338 R V D+ K + V QGDGR + DR+L+DAPCS G +RR P+ + Sbjct: 341 PHRAELVRDSTKAFTDQIVQVLQGDGRDFGGLH-PGKADRVLVDAPCSGLGSLRRRPEAR 399 Query: 339 WLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL 398 W + D+ +L LQ ++L + +K GG + YATCS E ++ ++ AD + Sbjct: 400 WNKSATDLKDLTALQQDLLRSALETVKPGGVVGYATCSPHLAETRQVVETTVKNRADLRV 459 Query: 399 CET-------------GTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + P Q P + D F A + KK Sbjct: 460 LDAPAVAREIIVNSEHDLGPGPYLQLWPDRDGTDAMFLALIQKK 503 >UniRef50_Q5P4P8 tRNA and rRNA cytosine-C5-methylases sun n=8 Tax=Betaproteobacteria RepID=Q5P4P8_AZOSE Length = 447 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 169/422 (40%), Positives = 245/422 (58%), Gaps = 14/422 (3%) Query: 12 AQAVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 A ++ + V G +L+ L + D + +++L +G LR + D ++ +L+ + Sbjct: 35 AASLVETVLGGANLTEAYERLLRANPGWPDATRGAVRDLAWGTLRDYGRGDVVLRRLLHK 94 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 P+ + + + +L + H + + V+ A A+ P LKG++NGVLR+ R Sbjct: 95 PLPVALHALLLVALH---RLEHRPDQAHTVVDQAVDAA-AVLAPGLKGVVNGVLRKRLRD 150 Query: 129 QEELLAEFNASDA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 + EL A A +A RY HP+W + +++ A+P W++ +EA NQRPPM LR+NRT S ++ Sbjct: 151 EHELAALVEADEAARYRHPAWWVAQVRAAWPGDWEAALEAGNQRPPMALRVNRTRASVEA 210 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 A L AG+ DA+ L+ P PV +LPGF G V+VQDA AQ WL G Sbjct: 211 VEAELRNAGIGSR--RLANDALVLDKPVPVASLPGFATGRVSVQDAGAQWAARWLDLAPG 268 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP 307 + +LD CAAPGGK HILE ++VA+++D +R+ R+ DNL+RLG+ A V + D R Sbjct: 269 QRVLDACAAPGGKAAHILE-TKPVELVALELDPKRVQRIRDNLERLGLDAQVLRADCRAL 327 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 W + FDRIL D PCSA+GV RRHPDIKWLRR D+ A Q++I+DA+WP L G Sbjct: 328 DTWWDGRPFDRILADVPCSASGVARRHPDIKWLRRREDVRRFAAQQADIVDALWPTLAPG 387 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLI 427 G ++Y TCSV EEN+ QI R D E E + +Q LP A + DGFFYA L Sbjct: 388 GRMLYVTCSVFNEENTAQIARLSARHPDLERLEI--DGRLERQLLP-ATDHDGFFYALLG 444 Query: 428 KK 429 K+ Sbjct: 445 KR 446 >UniRef50_Q2SSR7 RRNA methyltransferase RsmB (Sun protein), putative n=4 Tax=Mollicutes RepID=Q2SSR7_MYCCT Length = 428 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 116/436 (26%), Positives = 205/436 (47%), Gaps = 27/436 (6%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK-VSDKDKALLQELCFGVLRTLSQLDWLI 62 N RS+A +++V + +L + +K ++ +DK + L GV+ LD+L+ Sbjct: 9 TMNSRSIAFDILKKVFVNKAYSNVLLNKISKKNLNQQDKDFVFNLVHGVISNKIHLDYLL 68 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGV 121 KL+ + + ++++ LYQ++Y IP +A + E+V + Q IN + Sbjct: 69 AKLID--VKKTSIDLQVILLISLYQMIYLNSIPNYAIVNESVNLIKTTSQKQ-ANFINAI 125 Query: 122 LRQFQRQQE-----ELLAEFNASDARYLHPSWLLKRLQKAYPEQWQ-SIVEANNQRPPMW 175 L +F R ++ L + + L L K Y ++ IV N+Q P ++ Sbjct: 126 LNKFLRFKDKYLEINLDNKDLELCILHSFSYELYLMLIKQYDKEIVNQIVVNNHQIPKLY 185 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 +R+N + D + + D + + +++G++T+QD ++ Sbjct: 186 IRVNTLKITSDQLFNKYK--DIYLLEKTNVNDCLIANKT--IINSDLYKNGFITIQDKAS 241 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 L P +LD+C+APGGK TH+ + +VA +I+E ++ + +N+ RL Sbjct: 242 ILVSQILNPSLNTKVLDMCSAPGGKLTHLSMILKNTGNIVANEINESKIKLIKENITRLN 301 Query: 295 -MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + +V D R Q Q+FD ILLDAPCS GV +R P+IK + + LQ Sbjct: 302 CLNISVINMDARKIKQR---QEFDYILLDAPCSGFGVFKRKPEIKLRFDQIQVNSIINLQ 358 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLP 413 E+L++ + +LK G +VY+TC++ +EN QI FL + D + +Q Sbjct: 359 EELLESAYYNLKNNGEMVYSTCTINQDENQNQINKFLNKHKDM-------IKLYEQQIFG 411 Query: 414 GAEEGDGFFYAKLIKK 429 E DGF+ KL K+ Sbjct: 412 FEENTDGFYICKLKKQ 427 >UniRef50_B6IQ69 tRNA and rRNA cytosine-C5-methylase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IQ69_RHOCS Length = 456 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 118/457 (25%), Positives = 189/457 (41%), Gaps = 55/457 (12%) Query: 1 MKKQRNLR-SMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLS 56 M R A + ++ + ++ + + KD+ + L + VLR Sbjct: 1 MTPA--ARIQAAIDLLSEIEATPRPADALVSQFFRNRRYIGAKDRQGVAGLVYSVLRHRG 58 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKG 116 +L W +++ T L++ AE V + + G Sbjct: 59 RLGWWLDRC------NVMPTPRALLL-----------------AEAV-LVQGRRADSVSG 94 Query: 117 LINGVL----------RQFQR--QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSI 164 L NG R+ + + P W L+ A+ +++ + Sbjct: 95 LFNGAKFGPEPLNDSERRLLKAVDTHTIDHPKQPEALALEVPEWAEAPLRAAFGDRFHAE 154 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 + A P+ LR N +R+ A L EAG+ P P +R++ APV ALP F Sbjct: 155 MAAMLGEAPLDLRANPLKAAREQVQAALAEAGVTAAPTGLSPLGLRVQGRAPVSALPAFR 214 Query: 225 DGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRL 283 +G +QD +Q P+ G ++D CA GGKT I + + +VVA D+ E RL Sbjct: 215 EGLFEIQDEGSQLVALLADPRPGMQVVDFCAGAGGKTLAIAAMMDNKGRVVASDVLEGRL 274 Query: 284 SRVYDNLKRLGMKATVKQGDGRYPSQWCG--EQQFDRILLDAPCSATGVIRRHPDIKWLR 341 +R + +R G+ + W + +FDR+++DAPCS TG RR+PD +W Sbjct: 275 TRAKERFRRAGLHNIETRALSSERDPWVKRHKGKFDRVVVDAPCSGTGTWRRNPDSRWRP 334 Query: 342 RDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET 401 + EL LQ+ ILD+ ++ GG LVYATCS+LPEEN Q++AFL L Sbjct: 335 LGPGLAELLPLQAAILDSAARLVRPGGRLVYATCSLLPEENERQVEAFLANHPAFRLLPV 394 Query: 402 ----------GTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + P + DGFF A +++ Sbjct: 395 AEAWPENLGAAPVTGDTLRLTPARHDTDGFFAAVMVR 431 >UniRef50_C6NTF2 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTF2_9GAMM Length = 443 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 164/429 (38%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW 60 MK R R +A +++ + G L ++L + + + + LQ L LR L Sbjct: 1 MKPARLDRGLAIAGLQR-LWAGTRLDDLLMEMAPEQAG--RGTLQWLWSACLRQHGSLRR 57 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L L+ + + + + L+ + L +L + P A + + V + + +GL+N Sbjct: 58 LTELLLRKALRPEDEDLSALLHLALEELRAGQRPDFAVVNDWVGACALLHKEWARGLVNA 117 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR 180 +LR++ R++E L + DA + HP WL++RLQ+ YP QW I+ AN + P+WLR+N Sbjct: 118 LLRRYLREREPLEEQIR--DAHWNHPQWLVRRLQQVYPTQWPDILAANLREAPLWLRVNP 175 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + ++ L EA + HA P+A+RL+T PV ALPG+E GWV++QD +AQ Sbjct: 176 QAITPAAYAERLAEASLPAQSHAGLPEALRLDTAVPVRALPGWERGWVSIQDGAAQRAAH 235 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-ATV 299 LAP+ E +LD CAAPGGKTTH+L Q+ A+D + RL R+ L+RL + ++ Sbjct: 236 ILAPRPDERVLDACAAPGGKTTHLLSFGVR-QLTALDRSQARLERLRRELQRLQLPLPSL 294 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 D W FD ILLDAPC+A+GVIRRHPDI RR+ D+ + Q +L A Sbjct: 295 HVADAADVDAWWDGMVFDAILLDAPCTASGVIRRHPDILLRRREDDVERVRHEQRRLLAA 354 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGD 419 +W LK GG L+Y TCSVLPEEN QI +FL+ DA P Q LPG E D Sbjct: 355 LWRVLKPGGRLLYCTCSVLPEENGEQIASFLEEHDDAR----ALPHPQCGQRLPGEEGMD 410 Query: 420 GFFYAKLIK 428 GFFYA L K Sbjct: 411 GFFYALLGK 419 >UniRef50_A5WI31 Fmu (Sun) domain protein n=3 Tax=Psychrobacter RepID=A5WI31_PSYWF Length = 528 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 163/522 (31%), Positives = 234/522 (44%), Gaps = 100/522 (19%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 + +N+R + + +QGQSLS +L PL ++ DK L LR L Sbjct: 9 TQNKNVRVAVINTLLSI-QQGQSLSGLLDPLLNSLNGDDKGFAHALLLTTLRHWHATARL 67 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 ++ L P+ + V I +G+ QLLY + HAA+ ETVE I + GL+N V Sbjct: 68 LDSLADNPIDEIE--VRTTIQLGITQLLYLNVADHAAIHETVEAVKHIDYARASGLVNAV 125 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRT 181 LR+ + + + N + + P+WL ++L+ + E + + ++ Q PM+LR+N Sbjct: 126 LRKVAKNPNKFRKKANKN---HSLPNWLAQQLKVDWREHYDELTQSLRQSAPMFLRVNGL 182 Query: 182 HHSRDSWLALLDEAGMKGFPHAD-----YPD----------AVRLETPAPVHALPGFEDG 226 S+LA L EA + A PD A+ L PV LP FE+G Sbjct: 183 QTDSQSYLAQLTEADIAAELIALETSLKMPDTGETIGIKQQAIELIDSVPVSRLPEFEEG 242 Query: 227 WVTVQDASAQGCMTWLA----------PQNGEHILDLCAAPGGKTTHILEVAPE------ 270 +VQDA AQ + P +LD CAAPGGK H LE+ Sbjct: 243 IASVQDAHAQLAAPIIDALLQQVMSANPAEHIRLLDACAAPGGKLAHWLELLGNQEKQQT 302 Query: 271 -----------------AQVVAVDIDEQRLSRVYDNLKRLGMKATVK---------QGDG 304 ++ A+D + R++R+++NL+RL + A + D Sbjct: 303 GLFHVKQSDSQESTIDKVKLTAIDNEAPRITRIFENLERLQLPAPIVNSKLHLDIECVDA 362 Query: 305 RYPSQWC---GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 FD ILLDAPC+ATGVIRRHPDI LR + D+ QLQ +ILD +W Sbjct: 363 TTWQAKAVSADSSGFDAILLDAPCTATGVIRRHPDITLLRNEEDVQHTVQLQEQILDNLW 422 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE------TGTPEQPGKQNLP-- 413 P LKTGG L+Y TCS+L +EN Q++AFL R DA G ++ G+Q LP Sbjct: 423 PQLKTGGYLLYVTCSILKQENVEQMQAFLSRHKDAVAIAFDSETNWGIEQEVGRQCLPIY 482 Query: 414 --------------------------GAEEGDGFFYAKLIKK 429 GDGF+YA L K+ Sbjct: 483 KMTEALAPIAAQDDTPEAAKVQVNAQAPAGGDGFYYAVLKKQ 524 >UniRef50_B6BVG1 Sun protein n=1 Tax=beta proteobacterium KB13 RepID=B6BVG1_9PROT Length = 412 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 123/422 (29%), Positives = 219/422 (51%), Gaps = 20/422 (4%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPM 70 AA+ + + + G+ + + ++ + +K ++++ +G +R D+++ K + + + Sbjct: 8 AAKILSE-LISGRKIDTLFNRFLKE--ENNKNFIKDIVYGGIRDFYLNDYILKKFVKKDI 64 Query: 71 TGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE 130 + YL+M +YQ+ + + E V+ A I L+N VLR + R+++ Sbjct: 65 N--DHLIKYLLMNTIYQINHQSKAEFTVVNEAVKAAKKINNNFY-NLVNAVLRNYLREKD 121 Query: 131 ELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLA 190 +L+ RY +P W + L K YP +++I+ N R +RIN+ S + ++ Sbjct: 122 KLVTP-EEMYIRYSYPQWWVSDLMKEYPNDYEAILAIGNTRAKTVIRINQRQISLNDYID 180 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHI 250 LL++A + +++ + LPG+E G VQD +AQ +L QNG +I Sbjct: 181 LLEQANIDYE-LTLEDKYIQISNVKDITMLPGYERGHFYVQDPAAQLACDFLDIQNGMNI 239 Query: 251 LDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 LDLC+APGGK THILE + + DI ++R++ + N+KRL +K+ + + + Sbjct: 240 LDLCSAPGGKATHILERF-DVDLDCYDISKERINLIRSNMKRLQLKSNIIE-------KI 291 Query: 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTL 370 +++DRIL+DAPCS +GV+RR+ DIK +R+ +DI + + Q ++L+ W LK+GG L Sbjct: 292 DINKRYDRILIDAPCSGSGVVRRNIDIKLMRKQQDIEKFSNQQLQLLEEGWKILKSGGKL 351 Query: 371 VYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK---QNLPGAEEGDGFFYAKLI 427 +Y TCS+ EN + FL + DA + P Q +P DG F+ Sbjct: 352 LYVTCSIFKHENENVVMKFLSKNKDAASQDLIIPNGFKYQNTQLIPNQF-HDGLFFKIFS 410 Query: 428 KK 429 K Sbjct: 411 KN 412 >UniRef50_A2BK62 tRNA and rRNA cytosine-C5-methylase n=12 Tax=Archaea RepID=A2BK62_HYPBU Length = 472 Score = 366 bits (940), Expect = e-99, Method: Composition-based stats. Identities = 111/401 (27%), Positives = 194/401 (48%), Gaps = 13/401 (3%) Query: 42 ALLQELCFGVLRTLSQLDWLINKLMARP-MTGKQRTVHYLIMVGLYQLLY---TRIPPHA 97 LL + + ++ + LD + +L P + + + + + +L+ + H Sbjct: 69 RLLTSIFYDTMKRMGLLDRVAAELANVPTVLILDPWLRAALRLAVDIVLFHRPDKNTLHR 128 Query: 98 ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAY 157 + A P + + + + A + +YL P+WL++R++ Sbjct: 129 LRWIVADFISAKTHPYVGMFYWQTFDKLLEYRPKPKTVEEALEWKYLLPAWLIRRMRSLL 188 Query: 158 PEQ-WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAP 216 E+ + + EA N+RP + +R+N + + + L G P V+ E P Sbjct: 189 GEEESEKLFEALNKRPLISIRVNTLKTTVEEVVEELKREGKNPIVSTRVPVIVKFEGPYD 248 Query: 217 VHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVA 275 + +G +Q+ ++ L P+ G ++DL AAPGGKT+HI E+ ++ A Sbjct: 249 FDRSRLYREGKFVIQEEASAAASIILDPKPGMTVVDLAAAPGGKTSHIAELMKNHGRIYA 308 Query: 276 VDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH 334 DID R+ R+ L+R+G+ + + D R + GE+ DR+LLDAPC++TG I ++ Sbjct: 309 FDIDRVRIKRMRMILRRMGITIVRIFEKDAREAPRILGEEIADRVLLDAPCTSTGTIAKN 368 Query: 335 PDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 P+++W R+ + E+ +LQ E+L+A +K GG L+Y TCS+LPEEN IK FL+R + Sbjct: 369 PELRWRVREEGLEEIVKLQREMLEAAAKLVKPGGRLLYTTCSLLPEENEDNIKWFLKRHS 428 Query: 395 DAELCETGTPEQPG------KQNLPGAEEGDGFFYAKLIKK 429 + +L P P + P + GFFYA L KK Sbjct: 429 EFKLVPLNGPYDPSPLLHGTMRAWPHRHDTIGFFYALLEKK 469 >UniRef50_A7IDU9 Fmu (Sun) domain protein n=2 Tax=Xanthobacteraceae RepID=A7IDU9_XANP2 Length = 478 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 116/467 (24%), Positives = 201/467 (43%), Gaps = 57/467 (12%) Query: 7 LRSMA-AQAVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLI 62 R A + + +V + ++ + ++ D+D+ + +L + +LR +++ W + Sbjct: 17 ARLQATLELMHEVDSVARPADAVVSAWFRARRQIGDRDRGQIYDLLYALLRHHARIVWWL 76 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQL------------------------LYTRIPPHAA 98 K RP + R + +L + G L ++ P Sbjct: 77 AKH-GRPDVPRNRLLAWLALDGGTALGGKTSGNKTSGNKTSGNKTSGNKTSGSKTPD--- 132 Query: 99 LAETVEGAIAIKRPQLKGLINGVLRQFQR------QQEELLAEFNASDARYLHPSWLLKR 152 VL +R Q + + R+ PSW ++ Sbjct: 133 --------QIHGLFSGGKFAPAVLTDHERALLLKLQGCTIDHPAMPDEVRFECPSWAVEP 184 Query: 153 LQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLE 212 L++ + + ++ + A PP+ LR+N +R++ L L + G+K P P +R++ Sbjct: 185 LRRRFDDTFEREMAALLTPPPLDLRVNPVKSTREAMLRALRDLGLKAEPSRLAPFGIRVK 244 Query: 213 TPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL-EVAPEA 271 + +LP + G V +QD +Q + + GE ++D CA GGKT I ++A + Sbjct: 245 ERPSLASLPMLKSGEVEIQDEGSQLVAMLVDARPGERVVDFCAGAGGKTLAIAAQMANKG 304 Query: 272 QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCG--EQQFDRILLDAPCSATG 329 V+A D+ + RL R + +R G+ + +W + FDR+L+DAPCS TG Sbjct: 305 HVIACDVSDGRLKRAAERFRRAGLHNIETRPLASETDRWVKRHKGGFDRVLVDAPCSGTG 364 Query: 330 VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAF 389 RR+PD +W +++ + L LQ+ IL + +K GG LVYATCS+LPEEN Q+ AF Sbjct: 365 TWRRNPDARWRQQEAGLDHLLPLQARILASAARLVKPGGRLVYATCSMLPEENEAQVAAF 424 Query: 390 LQRTADAELCET--------GTPEQPGKQNLPGAEEGDGFFYAKLIK 428 L + G+ P E DGFF A L + Sbjct: 425 LAAYPAFHVMPVREAAPQLTGSAHPDHLSLTPARHETDGFFAAVLQR 471 >UniRef50_A3VQU7 TRNA and rRNA cytosine-C5-methylase-like protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQU7_9PROT Length = 455 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 125/446 (28%), Positives = 202/446 (45%), Gaps = 34/446 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNIL--PPLQQKVSDKDKALLQELCFGVLRTLSQLD 59 + R A + + +GQ+L + + + D+ + L VLR + LD Sbjct: 25 EPGLPARRAALDILLAI-RRGQALDMAMAESEAFEDLEGADRGFARTLIMAVLRRQNTLD 83 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLKGLI 118 + RP+ Q TV L+ + Q+L +PPHAA A TV+ A + L+ Sbjct: 84 EAYGTFLDRPLKSTQGTVITLLRLAAAQILLLGVPPHAATATTVDLAKERRDSAGFAKLL 143 Query: 119 NGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRI 178 N + R+ + L R P WL +RL++ Y + + A + P Sbjct: 144 NALCRRMVEKGPSL---IEDYPPRTDVPGWLWRRLERHYGAKTARRLAAAFVQEPALDLT 200 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 + R+ L+ H P ++R + LPG+ +G +QD +A Sbjct: 201 PKDPKERERLATALEA-------HPLGPVSLRRTAGGRIEDLPGYTEGDWWIQDLAAALP 253 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 ++ L G+ + DLCAAPGGKT + A V AVDI +RL R+ DNL RLG++A Sbjct: 254 ISLLGDLTGQRVYDLCAAPGGKTAQLAAAG--AHVTAVDISAKRLRRLEDNLARLGLRAD 311 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 GD + ++ D ++LDAPC+ATG +RRHPD+ W +++ D+ EL+ LQ ++L Sbjct: 312 TFVGD---VLGFSPDEPADLVVLDAPCTATGTVRRHPDLLWSKKEEDVAELSALQDQMLH 368 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ-----------P 407 ++ GG L++ TCS+L EE + +AFL R + E+ Sbjct: 369 HAARLVRPGGRLMFITCSLLAEEGEDRSRAFLSRHSQFTAEPLSDDEKERLGPLNAAKDG 428 Query: 408 GKQNLP----GAEEGDGFFYAKLIKK 429 + P A DGF+ A+ ++ Sbjct: 429 HLRTRPDLIADAGGMDGFYAARFTRQ 454 >UniRef50_B2UP28 Sun protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UP28_AKKM8 Length = 412 Score = 365 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 132/434 (30%), Positives = 194/434 (44%), Gaps = 33/434 (7%) Query: 1 MKKQRN-LRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQ 57 MK R A + ++ + + D+ L+Q L F VLR + Sbjct: 1 MKNNPPSPRQTALNCLRSWHAGRSFAETLVDRECSRTALPSADRHLVQALVFSVLRNQTW 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGL 117 LD +I L + ++ +GL QL + HAA+ ETV A +L+GL Sbjct: 61 LDHVIGTLRKGRL---DVEARLILQLGLSQLFLLGMADHAAVYETVNLA----SVRLRGL 113 Query: 118 INGVLRQFQRQQEELLAEFN--ASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPM 174 +N +LR R+++ +L E Y P+WL++R + Q + ++ NN P + Sbjct: 114 VNAILRNALRREKTILEEREKLPLSIHYSTPAWLVRRWTEQMGPQMARDLLRWNNTTPRL 173 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 ++R N + P P +E P L + G + V D S Sbjct: 174 YVRANPLMP--------MKNIPASLAPLDRAPGWFSVEGLLP---LEEIKTGSLYVADPS 222 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 + + LAPQ GE ILD CAAPGGK+ I +A + A D+ E RL + +NL R Sbjct: 223 TRYSIDLLAPQPGEEILDACAAPGGKSAAIIAATGGKAHLTATDLHEHRLPTLKENLDRQ 282 Query: 294 GMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 G Q D P + + +FD +LLD PCS TGVI+R D++W +I L L Sbjct: 283 GSSFVRTAQADWSLPCRTEWKGRFDAVLLDVPCSNTGVIQRRVDVRWRLTPEEIRRLTAL 342 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412 Q IL+ +K GG LVY+TCS+ EE+ L I+ FLQ + L E L Sbjct: 343 QKTILENASRAVKPGGRLVYSTCSIDAEEDGLLIRDFLQNHPEWTLKEEKL-------IL 395 Query: 413 PGAEEGDGFFYAKL 426 P E+ DG + A L Sbjct: 396 PHEEKSDGAYAALL 409 >UniRef50_Q8TGZ8 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGZ8_METKA Length = 449 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 121/444 (27%), Positives = 206/444 (46%), Gaps = 30/444 (6%) Query: 9 SMAAQAVEQVVEQGQS-LSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 ++AA+++ +V+ + +L + DK +++ + + + VLR L+ ++ + Sbjct: 10 ALAAKSLIEVMRTKSYPIQYVLRKTLSEYDDKTQSVTRSMVYDVLRRYGTLERVVEDVSR 69 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIK--RPQLKGLINGVLRQF 125 + L+MV ++LY P A + ++ G++ L ++ Sbjct: 70 ---SELPPLERALVMVAANEVLYEGKHPAPVTDSATRAAKELGLNHRRVHGVV-ADLEEY 125 Query: 126 QRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRP-PMWLRINRTHH 183 +R E E + Y HP W +++ E + + ++E +N+ P R+N T Sbjct: 126 ER--PEPEDEIDRLCLEYHHPRWFVEKFGALLDEDELKELMEVHNEPPEYYTFRVNTTAA 183 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH--ALPGFEDGWVTVQDASAQGCMTW 241 + L +E G + +R++ P+ L + +G + QD +A Sbjct: 184 DVEDVLREFEEHGFEVERGEYVDYCIRVKKGQPLRLEELECWREGHIVPQDEAAALVTEI 243 Query: 242 LAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-V 299 L PQ GE I DLCAAPGGKTTHI ++ EA+++AVD+ RL R+ +R+ + V Sbjct: 244 LNPQPGERIADLCAAPGGKTTHIAQLTEDEAEILAVDVSRVRLRRLERFAERMVFENIEV 303 Query: 300 KQGDGRYPSQ-WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + D R + +FDR+LLD PCS+ G +R PD+KW RDI ELA Q +++ Sbjct: 304 LRADVRRLGRNPRYVGKFDRVLLDPPCSSLGTLRSDPDVKWKIGPRDIRELALKQRQLIR 363 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR--------TADAE------LCETGTP 404 A LK GG LVY+TC++ PEEN L + ++R ++ E + + Sbjct: 364 AAARLLKPGGVLVYSTCTITPEENELVVSEAIKRDRLRPVDVRSEFEFLHPPLRVDGVSS 423 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIK 428 + P GFF AKL K Sbjct: 424 SLEAGRMWPHVHGTTGFFVAKLKK 447 >UniRef50_C5A6U4 SAM-dependent tRNA/rRNA cytosine-C5 methylase n=6 Tax=Thermococcus RepID=C5A6U4_THEGJ Length = 451 Score = 364 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 101/450 (22%), Positives = 206/450 (45%), Gaps = 28/450 (6%) Query: 4 QRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDK----ALLQELCFGVLRTLSQLD 59 + + + + A A+ V E+ S + L + +KV+ KD+ L F + + +++D Sbjct: 6 KVSFQEVVADALSLVEERELSSKHALERVFRKVAGKDREKARGLAHAYVFEIEKWRAKID 65 Query: 60 WLINKLMA-RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLI 118 ++IN ++ + + L+ +G +++ + ++PP A + + Sbjct: 66 FIINSVLKGSKVEDLDPYLANLLRIGTFEIHFRKVPPAIATDSIIRVVKERFDFSRAKFV 125 Query: 119 NGVLRQFQR-------QQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQ 170 N ++ ++ ++ + R+ HP W ++ + + ++ ++ +NN+ Sbjct: 126 NALMHSIEKFDVERALKRLKERDRIEWLSVRFSHPRWYVEYVIELLGYDEAVRLLLSNNR 185 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 ++R N DS L+E G++ L+ PV L +++G + Sbjct: 186 PQRYYVRANTLKTDMDSLRDYLEENGVRTALTPVPDVLKVLDYKTPVTRLDWYKEGKFVI 245 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 QD ++ L P+ GE +LDL AAPG KT H + + ++VAVD RL R+ + Sbjct: 246 QDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAASLMENKGEIVAVDYSYDRLMRMKEK 305 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 +K LG+K + DG+ + + +FDRI+LDAPCS++G R+ P++KW +R I Sbjct: 306 MKILGIKNVKLVHADGQ---SFRDKAKFDRIILDAPCSSSGTYRQFPEVKWRFDERKIKR 362 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ-- 406 + +Q +L + +L+ GG + Y+TCS+ +E+ + +++ EL Sbjct: 363 IISVQRNMLRNAYENLRDGGVMTYSTCSIRIDEDEENVLFAVEK-VGLELLPYDFSWGDR 421 Query: 407 -------PGKQNLPGAEEGDGFFYAKLIKK 429 + + + FF AK+ ++ Sbjct: 422 GFLEIGDRVFRAWTHRHDCNSFFIAKMGRQ 451 >UniRef50_B6W6K6 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W6K6_9FIRM Length = 426 Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats. Identities = 106/427 (24%), Positives = 208/427 (48%), Gaps = 13/427 (3%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 + + ++ + + ++I+ + ++VS D + + + +GVL L+++I KL Sbjct: 5 KLILDGLYRICYKNEKSTDIINDIAREVS--DISYITKNIYGVLENKLYLEYIIGKLSKI 62 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 + + V ++ +G+Y + + +A + E V + + K +N VLR + R Sbjct: 63 KIKKLDKKVLLILEIGIYNIHFLDRKNYAIVNELVNLTKKVSY-KSKSFVNAVLRSYIRD 121 Query: 129 QEEL-----LAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH 182 +E L + +Y P W++K L ++Y + + + + N++ + +R+N Sbjct: 122 EENLSKIKAKNKDQFQSIKYSIPLWIIKYLNESYGYDYTEKFLNSLNKKRKLSIRVNENK 181 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 ++ LL++ G + ++ ++ P+ + F+ G T+Q ++ L Sbjct: 182 IYKNKLKNLLEDKGYQLAESKISSRSLIVKNPSSLADTEEFKKGLFTIQSEASIKVCEVL 241 Query: 243 APQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 +P+ ILDLCAAPG KT+ + E+ +++VA DI +LS++ +N+KRLG+K Sbjct: 242 SPEKNSQILDLCAAPGTKTSFLAELCENSSRIVANDISFNKLSKINENIKRLGLKNIEIT 301 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 + +++FD IL D PCS GV+ R P+I++ R D+ L++LQ ILD + Sbjct: 302 NFDASIVKDEYKEKFDYILCDLPCSGLGVMDRKPEIRYNRTMEDVINLSKLQKNILDRAF 361 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGF 421 +LK GG +V++TC++ EN ++ + L + + +E DGF Sbjct: 362 LYLKKGGIMVFSTCTIGNIENKDNFTYLSKKKS---LKNIKINGEEYLEYNTFEDETDGF 418 Query: 422 FYAKLIK 428 F K K Sbjct: 419 FLTKFEK 425 >UniRef50_C6XRR6 Fmu (Sun) domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRR6_HIRBI Length = 487 Score = 362 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 124/441 (28%), Positives = 197/441 (44%), Gaps = 38/441 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNIL--PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R AA + ++V +G + L ++ D+ + + LR ++D + Sbjct: 64 RRAAADILMRIVHEGADMDEALASSKFFDELEGPDRGFARAIASAALRAFGRIDDALETY 123 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRP-QLKGLINGVLRQ 124 + RP+ V L+ VG QL + P +AA+ TVE A K + G++N +LR+ Sbjct: 124 LDRPLEKIDPAVLSLLRVGCAQLWVLKAPSYAAVDATVEAARQWKPASRGGGMVNAILRR 183 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 R+ E + A + P WL +R A E+ + P Sbjct: 184 AGREPEAY----ESLPASRIWPDWLSERFSSALGEETTQNIAMMQMLEPRIDL--TVKSD 237 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 ++W L+ A +VRL T A + L G+ +G VQD +A Sbjct: 238 PEAWAQKLEG-------TALPSGSVRLPTGASLTELEGYVEGEWWVQDVAATLPAQLFGD 290 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 G I DLCAAPGGKT + A+V A+D+ EQR+ +V +NL+R G+KA + D Sbjct: 291 VKGLSIGDLCAAPGGKTMQLAS--KGAKVTAIDLSEQRIEKVRENLERTGLKAKTQVTDA 348 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 R+ W + FD +LLDAPCSA G +RRHP+ W R D+ + + LQ +++ A + + Sbjct: 349 RH---WRPAEPFDAVLLDAPCSALGTLRRHPEGAWRRNDKGLDRYSGLQIKLVQAAYDMM 405 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTA---------DAELCETGTPEQPGKQNLPGA 415 K+GGT++Y C+ LP E +K + + E + G +LP Sbjct: 406 KSGGTMLYCVCTPLPAEGIEVVKEAVDSGKWISKPITPEEVPGYEHAIDDFGGLLSLPKF 465 Query: 416 E--------EGDGFFYAKLIK 428 + D F+ A+L K Sbjct: 466 DIENPEDLITSDVFYMARLEK 486 >UniRef50_D0ME27 Fmu (Sun) domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0ME27_RHOM4 Length = 434 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 108/439 (24%), Positives = 169/439 (38%), Gaps = 42/439 (9%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINKL 65 + +++ +L +K + +D+A + E +G+LR + Sbjct: 16 EAVVTVLREILRSPLPADTVLQQFFRKHRKMGKRDRAFVAETVYGMLRHYRR-------- 67 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPH--AALAETVEGAIAIKRPQLKGLINGVLR 123 +A + + +L LLY + A L V A R Sbjct: 68 LAHAARRRADDLRFLT------LLYLEVFGFGDAILDLPVRPAERGALEAAA-------R 114 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINRTH 182 +F R+ + A Y P WL+ + P + ++ A P+ +R+N Sbjct: 115 RF-REPDLPDDPAAALGILYSLPDWLVAAWLEVLPRETVEARCAALKAPAPLTVRVNTLK 173 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 R + L E G P P + LE A + F++G VQD +Q Sbjct: 174 ADRGTVQQRLLEEGFPSRPTPYSPVGLILEEKAFIFRTRAFQEGLFEVQDEGSQLISLLT 233 Query: 243 APQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ 301 + G+ ++D CA GGKT H+ + + ++ A DI E RL + +R + Sbjct: 234 EARPGQVVVDGCAGGGGKTLHLAALMEGKGRLYAFDIHEARLRELRPRTRRADVHNVRLH 293 Query: 302 G--DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 R + D +L+DAPCS TGV+RR+PD W + L + Q +IL+A Sbjct: 294 VLPHNRASIVRRLYGKADAVLVDAPCSGTGVLRRNPDAAWKITPERVAALVEQQRQILEA 353 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGA---- 415 P ++ GG LVYATCS+LP EN QI FL + L P Sbjct: 354 YAPLVRPGGRLVYATCSLLPAENEQQIHTFLNAHPEFTLIPAAEVLARQGIAFPHQTDAF 413 Query: 416 -------EEGDGFFYAKLI 427 DGFF A L+ Sbjct: 414 LRVEPATHGTDGFFAAVLV 432 >UniRef50_D1AKD9 Fmu (Sun) domain protein n=4 Tax=Fusobacteriaceae RepID=D1AKD9_SEBTE Length = 437 Score = 360 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 109/431 (25%), Positives = 205/431 (47%), Gaps = 24/431 (5%) Query: 14 AVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 +++++ G+ + L + + K+K+ + + L+ L +D+LI Sbjct: 11 LLDEIIAGGKYSNLQLNYYFSTKGYNKKEKSFITNIIHTTLKNLIFIDYLIE---KNASN 67 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPH-AALAETVEGAIAIKRPQLKGLINGVLRQFQRQQE 130 K+R + L+ + + Q L + + + E VE A I + Q G +N +LR ++ + Sbjct: 68 IKKRKIKQLLRISVAQFLLNKESDYSGIVFEAVETAKIINKHQ-TGFVNVILRNIFQKYD 126 Query: 131 ELLAEFNAS---DARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 +L++E + +P W++ ++ YPE + I+++ + + RIN SR+ Sbjct: 127 QLVSEIPPTKKYSVELSYPQWIINKIASDYPENYVRILQSYKTKSYLSFRINPRKFSRED 186 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 ++ L AG + V + + + F++ +VQDAS+ + L Q+ Sbjct: 187 FIKL---AGKHESKILFEIENVFYMSNSALLDTKEFKENCFSVQDASSYLAVKALDVQDD 243 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA-TVKQGDGRY 306 + +LD C+APGGK + IL+ VVA DI E ++ + + K+ + D R Sbjct: 244 DIVLDACSAPGGKMSAILQEYNPDLVVASDIHEHKIGMLKEIKKKNNFTNLKIVLNDARE 303 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 + ++FD+ILLD PCS GV+R+ P+ + + DI +L ++Q I D+ + LK Sbjct: 304 IGEL--NEKFDKILLDVPCSGLGVLRKKPEKIYTLENSDIKKLKKIQKAIFDSAYHSLKE 361 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP-------EQPGKQNLPGAEEG- 418 G ++Y+TC+ EEN+ IK F ++ D + P ++ G + + Sbjct: 362 NGVIIYSTCTFTREENTNNIKYFTEKYPDLVIENVIFPDNVFISKDEFGGSFIDYRNKYL 421 Query: 419 DGFFYAKLIKK 429 DGF+ AK KK Sbjct: 422 DGFYIAKFRKK 432 >UniRef50_B5YIL4 Sun protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIL4_THEYD Length = 441 Score = 360 bits (925), Expect = 6e-98, Method: Composition-based stats. Identities = 115/448 (25%), Positives = 201/448 (44%), Gaps = 36/448 (8%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNIL-PPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 ++ R +A + + VV + L L + D+A L E+ +GVLR L +DWL+ Sbjct: 4 KSPRKVAVEVLNNVVGTKKPLKFALTENILSMFDKADRAFLLEVIYGVLRNLYYIDWLLE 63 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + +YQL++ IP +A ETV + ++N +LR Sbjct: 64 DFYKSR-EKLSMYTINNLRCAIYQLVFMHIPAYAVANETVNVEKSFNGK--PNVVNAILR 120 Query: 124 QFQRQ---------QEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 F R+ E++ + Y HP WL+ R K + + +++++ANN++PP Sbjct: 121 NFLRKYQADEIFRITEQMQTDNKNLSVVYSHPEWLITRWLKRFQLNEVKALLKANNEKPP 180 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAP-VHALPGFEDGWVTVQD 232 + + + R + G K + +E + + VQD Sbjct: 181 ITIAVKP--EERQMIGEYFTQKGFKVSFSKHVASGLIIEGQGYEIRKTLKESPFFWIVQD 238 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 ++Q L P G ILD CA+PGGKT + + ++ ++ +++RL + +N+ R Sbjct: 239 EASQLVCFLLEPFEGACILDACASPGGKTLLTAALIKKGTIICIENNKKRLENLQENIAR 298 Query: 293 LG-----MKATVKQGDGRYPSQW-------CGEQQFDRILLDAPCSATGVIRRHPDIKWL 340 + ++ D S +FDRI+LDAPCS+TGVIRR+PD+++ Sbjct: 299 VKKFLPDVEIQPILADICQISLKKHLDSLGFNTHKFDRIILDAPCSSTGVIRRNPDVRYR 358 Query: 341 RRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE 400 +++I L++ Q +L+ + L G LVY+ CS PEE I++FLQ+ + + Sbjct: 359 VNEQEIKRLSKTQKLMLENVSQFLVKNGILVYSVCSTEPEEGEEVIESFLQKHDEFSSIK 418 Query: 401 TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + P + DGFF KL++ Sbjct: 419 K-------LRTYPHIDGMDGFFMGKLLR 439 >UniRef50_C6WT60 Fmu (Sun) domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT60_METML Length = 514 Score = 359 bits (923), Expect = 9e-98, Method: Composition-based stats. Identities = 108/451 (23%), Positives = 173/451 (38%), Gaps = 51/451 (11%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQ 57 M NL AA + ++ L + + K++A + E +GVLR L Sbjct: 1 MTP--NLIRQAAIVLSNLLTFSSPADAKLSEFFRNNRDLGTKERAFVAESVYGVLRRLRF 58 Query: 58 LDWLINKLMARPMTGKQRTVHYLIM---VGLYQLLYTRIPPHAALAETVEGAIAIKRPQL 114 L + P ++ + +L+ + + +L L E + + + + Sbjct: 59 LSTVTANDENDPDDARKLILAWLLRVQGMSIRELEPM-------LNEQQKEWAHLIKAKS 111 Query: 115 KGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPP 173 + + WL +L Y E + +I + +++ Sbjct: 112 T-------------------DNLPLAVQADVRDWLWDKLVAQYGEAEALTIARSMHEQAT 152 Query: 174 MWLRINRTHHSRDSWLALLDEAGM----KGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 + LR+N +RD LA P +R+ + F +G + Sbjct: 153 LDLRVNTIKGTRDEVLAKFIAENTSGETNVTKTPYSPLGIRMPNRMNIGRHVLFTEGKIE 212 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYD 288 VQD +Q +A + G + D CA GGKT I + ++ A D+ E+RL + Sbjct: 213 VQDEGSQLLAHLVAAKRGMMVADFCAGAGGKTLAIGALMRNTGRIYAFDVSEKRLHNLGQ 272 Query: 289 NLKRLGMKA--TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 LKR G+ P +FDR+L+DAPCS G +RR+PD+KW + D+ Sbjct: 273 RLKRSGLSNLNAQVISSETDPKLKRLNGKFDRVLVDAPCSGLGTLRRNPDLKWRQTPEDV 332 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC------- 399 EL Q+ IL K GG LVYATCS+L +EN + FL D +L Sbjct: 333 AELNVKQTNILARAAKLTKVGGRLVYATCSLLSDENEKIAEQFLATHPDFKLLNAAEILA 392 Query: 400 --ETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 + + LP DGFF A K Sbjct: 393 QQQIELDTGDYLKLLPHLHNTDGFFAAVFEK 423 >UniRef50_A7BCC1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCC1_9ACTO Length = 490 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 131/481 (27%), Positives = 198/481 (41%), Gaps = 55/481 (11%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKV------SDKDKALLQELCFGVLRT 54 ++K R +A + +V QG + ILP ++ SD+D A EL G LR Sbjct: 13 LRKADEPRRIAYDVLHEVETQGAFTNIILPKALRQARRDGHFSDRDAAFTSELVHGTLRA 72 Query: 55 LSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQL 114 + +LDW+I++ + RP+ ++ +G +QLL R+P HAA++ TV+ A Sbjct: 73 IGRLDWVISRHIDRPLADLDPRALVVLRMGAHQLLDMRVPDHAAVSATVDVAREHLTDGP 132 Query: 115 KGLINGVLRQFQRQQ--------EELLAEFNASDARYLHPSWLLKRLQKAYP------EQ 160 +N VLR R+ + + E A RY HP+W++ + A ++ Sbjct: 133 VRFVNAVLRSITREDPSEREAAMDAIADEDQALGVRYSHPAWMVTAFRDALKAHGYPEDE 192 Query: 161 WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDE-AGMKGFPHADYPDAVRLETPAPVHA 219 ++ A+N+ P + L + S D ++ + A P AV LE+ P Sbjct: 193 LLDVLVADNEVPTVTLVARPSLMSVDELADEAEDILDTRVALGAVSPYAVLLESGDP-AR 251 Query: 220 LPGFEDGWVTVQDASAQGCMTWLAPQN-----GEHILDLCAAPGGKTTHILEVAPEA--Q 272 LP DG QD +Q A E LDLCA PGGK + +A + Sbjct: 252 LPSIRDGRAGAQDEGSQLAALIAASAPLEGDNDERWLDLCAGPGGKAALLAGLAAGVGAR 311 Query: 273 VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS---QWCGEQQFDRILLDAPCSATG 329 V A ++ R R+ + R V GDGR FDR+++DAPCS G Sbjct: 312 VTANEVHPHRA-RLVERTTRQFDSIEVVSGDGRTFGGGQSAWRLGSFDRVVVDAPCSGMG 370 Query: 330 VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAF 389 +RR P+ +W R D+ EL LQ E+LD + GG L Y TCS E Q++ Sbjct: 371 SMRRRPESRWNRTPADVEELTVLQRELLDRAVALTRPGGVLTYITCSPHAAETREQVERL 430 Query: 390 LQRTADAELCE---------------------TGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 L+ + EL + Q D F A L K Sbjct: 431 LKA-GEVELLDTVALANECAPQALDVPASAGVIKGFSGRTLQLWDHRFGTDLMFVACLRK 489 Query: 429 K 429 + Sbjct: 490 R 490 >UniRef50_C8NZ84 rRNA methylase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ84_ERYRH Length = 404 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 106/428 (24%), Positives = 197/428 (46%), Gaps = 35/428 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R + + + +V +G+ +L L + +D+A + + L+ LD+ L+ Sbjct: 3 RIESYKVLSEVYFKGRHAHLVLKEL--DLPAQDQAFVSAFVYATLQNSLFLDYQYEDLVD 60 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ-F 125 + + V +I +G Q +IP +A ++ETV+ AI + + G++N VL++ Sbjct: 61 KKLPK---EVRLVIKMGCAQYFKMDKIPDYALVSETVDLCKAIGKHRYSGVVNAVLKKVI 117 Query: 126 QRQQEELL-AEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINRTHH 183 +R + E+ ++ + +Y P W++K L K Y E + + + P ++R N Sbjct: 118 ERNEREISGSDLEVASIQYSMPLWIMKLLSKQYSESFSLAYAQYCQDIKPTYVRFNALKP 177 Query: 184 SRDSWLA-LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 + D +LD+ + ++G+V VQD ++Q + W+ Sbjct: 178 TTDDLSDFILDDQDKHLAK-------------PALFKSKYLQEGYVLVQDINSQEVVRWM 224 Query: 243 APQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VK 300 + +LD C PG KT I + + V++ E R L+R + + Sbjct: 225 DLEPSLSVLDCCCGPGTKTVQIANYLENSGTITGVELHESRAEATRALLERCNVVNANII 284 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 D Q+ +Q++DRIL+DAPCS GV+ D+++ +D+ EL ++Q E+L Sbjct: 285 TSD---VLQFQTDQKYDRILVDAPCSGLGVLSHKHDLRYHIFPQDLDELVKIQQEMLIHT 341 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG 420 +K G LVY+TC++ +EN Q++ FL ++ EL + P +GDG Sbjct: 342 SQFVKKDGILVYSTCTLNRKENEKQVQTFLDHHSNFELIK-------EVTLNPVETKGDG 394 Query: 421 FFYAKLIK 428 F+ AKL + Sbjct: 395 FYIAKLKR 402 >UniRef50_C6R1D5 Ribosomal RNA small subunit methyltransferase B n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R1D5_9MICC Length = 659 Score = 357 bits (918), Expect = 4e-97, Method: Composition-based stats. Identities = 118/507 (23%), Positives = 182/507 (35%), Gaps = 86/507 (16%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLD 59 + R+ + V E + +LP + ++ +D EL +G LR D Sbjct: 160 RTADTARATVFDVLRSVAESDAYANLVLPKAIRSHRLDHRDAGFATELTYGTLRHQGTYD 219 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 ++++ + RP+ T ++ +G++QLL R+P HAAL ++V A IN Sbjct: 220 AILSRCVDRPIEKVGTTTLIVLRMGVHQLLNMRVPAHAALNQSVSLAREKIGAGPASFIN 279 Query: 120 GVLRQFQRQQEELLAEF---------NASDARYLHPSWLLKRLQKAY------PEQWQSI 164 VLR+ + E E HP W+++ +++A + + + Sbjct: 280 AVLRRVSERTPEEWYELIIEDAKDDTERMALLASHPGWIVRSMRQALVAHGRPASEIEQL 339 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 +EA+N P + L S + G L + L Sbjct: 340 LEADNLAPVVNLVALPGLGSLEEAREQGAIDGELVE-------GSALYASGDLARLESVH 392 Query: 225 DGWVTVQDASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEVA--PEAQVVAVDI 278 +G V QDA +Q LA LDLCA PGGK + + A +VA + Sbjct: 393 EGTVRAQDAGSQLVARALAAAPLDGTDTAWLDLCAGPGGKAALLGALGIQRGASLVANEA 452 Query: 279 DEQRLSRVYDNLKRL-GMKATVKQGDGRY------------PSQWCGEQQFDRILLDAPC 325 R V +++ L TV GDGR P Q FDR+++D PC Sbjct: 453 APHRAQLVESSMRPLPEDSYTVLTGDGRQIRETLRKNASDLPGSIEPGQLFDRVMVDVPC 512 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 S G +RR P+ +W + RDI EL LQ ++LDA + GG + Y TCS E Sbjct: 513 SGLGALRRRPEARWRKSPRDIAELLPLQRQLLDAAIEATRPGGVIAYVTCSPHAAETQNI 572 Query: 386 IKAFLQ-----------RTADAELCETGTPEQPG-------------------------- 408 + L+ + L G +P Sbjct: 573 VAEVLESGAVSLLDSAAALREVALHTEGANGEPVSVLAGEKDPGHTPEIKVKKGAPVVKA 632 Query: 409 ------KQNLPGAEEGDGFFYAKLIKK 429 Q P D F A L K Sbjct: 633 SENPTTAQLWPHVHGTDAMFLALLRKN 659 >UniRef50_A3UKE9 RRNA methyltransferase RsmB n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UKE9_9RHOB Length = 450 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 139/444 (31%), Positives = 207/444 (46%), Gaps = 32/444 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNIL--PPLQQKVSDKDKALLQELCFGVLRTLSQLD 59 K R++A AVE V+ + L L P +++ +D+A + + V+R LD Sbjct: 21 TKNLMPRAVALGAVEGVLAKAVPLDGALAGRPEWKRMEPRDRAFARAIASAVIRRPIALD 80 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEG-AIAIKRPQLKGLI 118 + +++ +P+ ++ H ++ G + L P HAA+ V A + K L Sbjct: 81 AALMQVLDKPLPDEEVRAHLILRCGAAERLILDTPAHAAVDAWVSLMAQDRHTARFKNLA 140 Query: 119 NGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRI 178 N VLR+ Q ++ + + + P WL +R + Y E + PP Sbjct: 141 NAVLRRVVDQGKDAFLDSDPLE---DLPDWLAERWVETYGEPTARAIAIARSVPPTLDLT 197 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGC 238 + S+ + + ++ +R V LPGFE+G VQDA+A Sbjct: 198 AKPGFDAQSFAEEIGASVLET-------GTIRRPDIGAVDGLPGFENGDWWVQDAAAALP 250 Query: 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L + GE + DLCAAPGGKT + A V+AVD +RL R+ DNL+R +KA Sbjct: 251 AKLLGVKAGETVADLCAAPGGKTLQLAATG--ASVIAVDASPKRLKRLEDNLERTKLKAE 308 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + D + W + D ILLDAPCSATG +RR PD W ++ DI LA +Q +LD Sbjct: 309 IVAAD---VADWTAPEPLDAILLDAPCSATGTLRRRPDAAWAKQPGDIANLADIQRRLLD 365 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQ-------- 410 A + LK GG LVY TCS+ EE QI+AFL+RT DA L E PG + Sbjct: 366 ASFNQLKPGGRLVYCTCSLEREEGEDQIEAFLKRTPDARLDPVTADELPGLKAAITPDGA 425 Query: 411 ------NLPGAEEGDGFFYAKLIK 428 DGF+ A+++K Sbjct: 426 VRTRPDLWSERGGLDGFYIARIVK 449 >UniRef50_Q8TGY2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGY2_METKA Length = 431 Score = 357 bits (917), Expect = 5e-97, Method: Composition-based stats. Identities = 109/428 (25%), Positives = 194/428 (45%), Gaps = 20/428 (4%) Query: 18 VVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARP-MTGKQRT 76 + E+G SL L + + + +Q L ++R L +D ++N+++ + Sbjct: 1 MEERGHSLKAALRNALRGIGGRRHRFVQALAHELVRVLGNVDLVLNRVLRGSTVEDLHPY 60 Query: 77 VHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEE----- 131 + + VG +++ + R P V+ P+ N +LRQ +R E Sbjct: 61 LRNALRVGTWEIHWRREHPGPVTKAVVDVVKERVGPKHARFANAILRQVERVNPEEVISS 120 Query: 132 LLAEFNASDARYLHPSWLLKRLQKAYP--EQWQSIVEANNQRPPMWLRINRTHHSRDSWL 189 + ARY P W ++ ++ A+ ++ + +EA N+RP ++R+N + + Sbjct: 121 IRDPTARFAARYNFPKWYVELVRSAFDSMDELRKFLEACNRRPARYVRVNTLVSDPEEVV 180 Query: 190 ALLDEAGMKGFPHADYPDAVRLETPA-PVHALPGFEDGWVTVQDASAQGCMTWLAPQNGE 248 L G++ D PD +R+ + PV P F+ G V Q ++ P+ G Sbjct: 181 RRLKRRGIEAERDPDVPDVLRIRSAETPVIKTPEFKKGEVYPQTKASAAVAHAAEPEPGM 240 Query: 249 HILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATV--KQGDGR 305 ++DLCAAPGGKTTH+ ++ +++A+D+ +R + +++ V D R Sbjct: 241 TVVDLCAAPGGKTTHLAQLMEGRGEIIAIDMHPKRFGTLKKRVRQFHADDIVETLCMDAR 300 Query: 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR-RDRDIPELAQLQSEILDAIWPHL 364 GE D +L+D PC+ TG + P+ +W R + + AQLQ E+L L Sbjct: 301 DAPDQLGEGIADLVLVDPPCTGTGSVYSKPEKRWDRETTGEPTKWAQLQWELLKVAVRLL 360 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE-------TGTPEQPGKQNLPGAEE 417 K GG +VY+TCS+ EN I+ ++R EL + G ++ P + Sbjct: 361 KPGGRIVYSTCSITLTENERLIERLVRRYRGLELVDVPLEWASPGVRMPEARRIWPHRHD 420 Query: 418 GDGFFYAK 425 DGFF A+ Sbjct: 421 TDGFFVAR 428 >UniRef50_Q2WB24 tRNA and rRNA cytosine-C5-methylase n=3 Tax=Alphaproteobacteria RepID=Q2WB24_MAGSA Length = 431 Score = 357 bits (917), Expect = 5e-97, Method: Composition-based stats. Identities = 144/446 (32%), Positives = 210/446 (47%), Gaps = 35/446 (7%) Query: 1 MKKQ--RNLRSMAAQAVEQVVEQGQSLSNILPPL-QQKVSDKDKALLQELCFGVLRTLSQ 57 MK+ + R++A + V+++G+ L ++L ++ D+D+ ++ L LR L Q Sbjct: 1 MKRASSTSPRAIAVDLLSMVLDKGRLLDDVLDDSRLSRLEDRDRGFVRMLLGTTLRRLGQ 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGL 117 +D LI + +PM + + +G+ QLL+ + PHAA++ TV+ K L Sbjct: 61 IDTLIEHCLDKPMRAGAAGAEHALRLGICQLLFLDVAPHAAISTTVDLVKGSKLAGFAKL 120 Query: 118 INGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWL 176 +N VLR+ R+ +L A P WL + KAY E +I A+ P+ + Sbjct: 121 LNAVLRRLDREGRDLAA--AQDAGLLNTPEWLWRSWVKAYGEDGAHAIAAAHLIEAPVDI 178 Query: 177 RINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 W L+ + + ++R V ALPGF+DG +QDA+A Sbjct: 179 ---TVAADSALWAERLEASVLPT-------GSLRRAAGGSVAALPGFDDGAWWIQDAAAA 228 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L G+ + DLCAAPGGK + A + A+D +RL R NLKRLG+K Sbjct: 229 LPARLLGDVRGKAVADLCAAPGGKALQLAVAG--ADLTALDRSAKRLVRFTANLKRLGLK 286 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 A V + D W FD ILLDAPCSATG +RRHPD+ + ++ +LA +Q+ + Sbjct: 287 AKVVEADA---GAWTPPAPFDAILLDAPCSATGTLRRHPDVARHKNPAEVMKLAGVQARL 343 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG-------- 408 L A P LK GGTLVY TCS+ EE QI A L A E G Sbjct: 344 LQAAIPMLKPGGTLVYCTCSLEAEEGPEQIAALLAGGAPLRRVPIRPEEVGGLAELITPE 403 Query: 409 --KQNLP----GAEEGDGFFYAKLIK 428 + LP D FF A+L K Sbjct: 404 GDLRTLPCHLASQGGMDAFFAARLEK 429 >UniRef50_D2NSI1 tRNA and rRNA cytosine-C5-methylase n=2 Tax=Micrococcaceae RepID=D2NSI1_9MICC Length = 697 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 120/507 (23%), Positives = 183/507 (36%), Gaps = 86/507 (16%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLD 59 + R+ + + V E + +LP + ++ +D EL +G LR D Sbjct: 198 RTADTARATVFEVLRSVAESDAYANLVLPKAIRSHRLDHRDAGFATELTYGTLRHQGTYD 257 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 ++ + RP+ T ++ +G++QLL R+P HAAL ++V A IN Sbjct: 258 AILRHCVDRPLEKVGTTTLIVLRMGVHQLLNMRVPAHAALNQSVSLAREKIGAGPASFIN 317 Query: 120 GVLRQFQRQQEELLAEF---------NASDARYLHPSWLLKRLQKAY------PEQWQSI 164 VLR+ + E E HP+W+++ +++A + + + Sbjct: 318 AVLRRVSERTPEEWYELIIKDAKDDTERMALLASHPAWIVRSMRQALVAHGRPASEIEQL 377 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 +EA+N P + L S D G L T + L Sbjct: 378 LEADNLAPVVNLVALPGLGSLDEAREQGAVDGELVE-------GSALYTSGDLARLESVR 430 Query: 225 DGWVTVQDASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEVA--PEAQVVAVDI 278 +G V QDA +Q LA LDLCA PGGK + + A +VA + Sbjct: 431 EGTVRAQDAGSQLVARALAAAPLDGTDTAWLDLCAGPGGKAALLGALGIQRGASLVANEA 490 Query: 279 DEQRLSRVYDNLKRL-GMKATVKQGDGRY------------PSQWCGEQQFDRILLDAPC 325 R V +++ L TV GDGR P Q FDR+++D PC Sbjct: 491 APHRAQLVESSMRPLPEDSYTVLTGDGRQIRETLRKNASDLPESIEPGQLFDRVMVDVPC 550 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 S G +RR P+ +W + RDI EL LQ ++LDA + GG + Y TCS E Sbjct: 551 SGLGALRRRPEARWRKSPRDIAELLPLQRQLLDAAIEATRPGGVIAYVTCSPHAAETQNI 610 Query: 386 IKAFLQ-----------RTADAELCETGTPEQPG-------------------------- 408 + L+ + L G +P Sbjct: 611 VAEVLESGAVSLLDSAAALREVALHTEGANGEPVSVLAGEKDPGHTPEIKVKKGAPVVKA 670 Query: 409 ------KQNLPGAEEGDGFFYAKLIKK 429 Q P D F A L K Sbjct: 671 SENPTTAQLWPHVHGTDAMFLALLRKN 697 >UniRef50_C9RK88 Fmu (Sun) domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RK88_FIBSS Length = 419 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 121/438 (27%), Positives = 187/438 (42%), Gaps = 39/438 (8%) Query: 8 RSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 R A + + G + +S EL GV R L++ + L Sbjct: 5 REEAFRVLLLWQRDGSFIKE------SGLSP----FAMELALGVCRRHLYLEYFVKSLTK 54 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIK-RPQLKGLINGVLRQFQ 126 + + ++ +GL+Q+ + +P +AA+ ++VE A + L+N VLR + Sbjct: 55 KLPS---LEARVILEMGLFQMFFMDVPDYAAINDSVELAKSANLGESTARLVNAVLRTAR 111 Query: 127 RQQEELLAE--FNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHH 183 RQ E L P WL++R Y ++ +++ +A +RP W+R+N Sbjct: 112 RQGEPALPPQRVRRVSVENSVPEWLVRRWFDVYGGDRAEALAKATLERPTEWIRVNLQKT 171 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH---ALPGFEDGWVTVQDASAQGCMT 240 S + G Y + + V ALP F G + Q+ SA + Sbjct: 172 SAPVLAEKIGITG----ASILYDRFIEIPRDVGVKLLLALPEFVKGQFSFQNPSAFEVVK 227 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 L + G + D CAAPGGKT + E+ +++A D RL ++ D + RLG+ Sbjct: 228 LLDLKPGLKVWDACAAPGGKTALMAEMDSSLEILASDSSASRLEKMQDLMNRLGLTNIKT 287 Query: 301 QGDGRYPSQWCGEQ--------QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + P+ Q +FDRILLD PCS GVI R P+ + I E+A+L Sbjct: 288 EVIDLAPASATSPQQSTLSSEAKFDRILLDVPCSNMGVIARRPESVYRMTPESINEVAEL 347 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412 Q +IL+ L GG LVYATCS P E + I F++ + + G P PG + Sbjct: 348 QFKILENASTALAPGGRLVYATCSPDPTETTRVIARFVKVHPEF--VKVGEPVLPGLK-- 403 Query: 413 PGAEEGDGFFYAKLI-KK 429 DGFF L KK Sbjct: 404 --DSRLDGFFAQALEYKK 419 >UniRef50_A6LN58 NusB/RsmB/TIM44 n=2 Tax=Thermosipho RepID=A6LN58_THEM4 Length = 416 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 114/429 (26%), Positives = 199/429 (46%), Gaps = 32/429 (7%) Query: 10 MAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARP 69 +A + + + G + V +KA + L FGVLR LDW+IN L+ + Sbjct: 7 IAYRLLRKKFRSGIFSTE-FYQAFSYVE--EKAFFKNLIFGVLRKQEYLDWVINSLLKK- 62 Query: 70 MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ 129 ++ ++ +G YQLL+T P ++ + ETVE KGL+N +LR+ + Sbjct: 63 -KDIPPSIRTILRIGTYQLLFTNKPSYSIVNETVELVEK---KSFKGLVNAILRKISKIG 118 Query: 130 EELLAEFNASDARYLHPSWLLKRLQKAYPEQWQ-SIVEANNQRPPMWLRINRTHHSRDSW 188 E +Y HP WL++ +K P + I+E N R+N+ RD Sbjct: 119 ---YTEPKELYLKYSHPKWLIEYWKKFLPLDYIYKILEYNQYPLKTTARVNKRKIDRDKL 175 Query: 189 LALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 FP P + E L + +G++T Q S+Q + + Sbjct: 176 KIE------NIFPTPHSPVGIYFEKIEENPWKLDKYINGYITYQSESSQIIPLLVDFEKD 229 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP 307 E + D CAAPGGK THILE+ + +V D+++Q++ + + KRL ++ Sbjct: 230 ELVFDACAAPGGKATHILELC-DVNLVINDVEKQKIKILENQFKRLNLRPKKILNFDAQ- 287 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 + + +FD+I +DAPCS+ G+ RR+P++ ++ + +L+++Q I+ +W +LK Sbjct: 288 -KITLKDKFDKIFIDAPCSSLGIARRNPEVLRRQKKENFKKLSEIQINIISNLWKYLKKH 346 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADA-----ELCETGTP---EQPGKQNLPGAEEGD 419 G ++Y+TC+V EEN+ +K + + A+ L + G + G P Sbjct: 347 GIMIYSTCTVTIEENTNTVKKW-KPFAEFVDIRERLEKFGIKYVWDGYGTLFYPDEILTP 405 Query: 420 GFFYAKLIK 428 F+ + L K Sbjct: 406 -FYVSILRK 413 >UniRef50_A6UED5 Fmu (Sun) domain protein n=14 Tax=Rhizobiales RepID=A6UED5_SINMW Length = 470 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 132/453 (29%), Positives = 211/453 (46%), Gaps = 45/453 (9%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPP-----LQQKVSDKDKALLQELCFGVLRTLS 56 K R AA+ + VV++ L +L P + ++++D D+AL++ + LR L Sbjct: 34 KPGLKSRQAAAKILAAVVDRKTPLDGMLDPERGNPVYRELNDADRALVRAILNSALRHLP 93 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAI-KRPQLK 115 ++ I+ L+ P+ R + +++ V Q+LY +P H+A+ VE A + + + Sbjct: 94 RIRAAIDSLLQTPLPEGARALEHVLTVAAAQILYLDVPDHSAVDLAVEQAQSDPRNRRFA 153 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPM 174 L+N VLR+ R++E +L A P W RL Y +Q + I +A + Sbjct: 154 SLVNAVLRRLSREKEAILERLQQVPA---MPGWFFDRLVTCYGRDQAERISDAQLVPAAI 210 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL-ETPAPVHALPGFEDGWVTVQDA 233 + SW L+ + +VRL + + +LPGF +G VQDA Sbjct: 211 DV---TVKSDAASWADRLNGTVLPT-------GSVRLQDFDGSIPSLPGFSEGGWWVQDA 260 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL 293 +A +G ++DLCAAPGGKT + V A+V+A+D RL R+ NL+RL Sbjct: 261 AASIPARLFGDISGRKVVDLCAAPGGKTAQL--VLAGAKVIALDQSSSRLRRLKANLERL 318 Query: 294 GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 G+++ K+ D + + E+ FD LLDAPCS+TG RRHPD+ W + D+ +LA LQ Sbjct: 319 GLESATKEAD---MADFRPEELFDAALLDAPCSSTGTTRRHPDVLWTKGPDDVEKLAGLQ 375 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL- 412 +L +K GG LV++ CS+ P E + + E PG + Sbjct: 376 ERLLRHALTLVKPGGLLVFSNCSLDPREGEEVVARVVAD-GGCERVPIDAAAWPGLEQAI 434 Query: 413 -----------------PGAEEGDGFFYAKLIK 428 P A DGF+ A L + Sbjct: 435 TALGEFRTTPAMLSLGPPFASGLDGFYAAVLRR 467 >UniRef50_A9IZD6 SUN-family protein n=5 Tax=Bartonella RepID=A9IZD6_BART1 Length = 454 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 129/456 (28%), Positives = 203/456 (44%), Gaps = 48/456 (10%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ-----KVSDKDKALLQELCFGVLRTLSQ 57 +R + + + VV++ LS + K+S +D+ L + + LR Q Sbjct: 15 PGLAVRQVCVRLLGAVVDRYTPLSGLTDNEHGHPQYLKLSQRDRLLCRAILTTSLRHRGQ 74 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLKG 116 + ++ + RP+ + ++ +L+ + + Q+LY IP HAA+ V A R + G Sbjct: 75 ITAALSCFLERPLPSQALSLQHLLHISVAQILYLDIPDHAAIDLAVRVAKFDPRMRRFSG 134 Query: 117 LINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 ++N +LR R+ L + + P+W + L AY E+ Q I+E + PP+ Sbjct: 135 VVNALLRNVAREAAPLRQQVPTIE---GVPAWFSQLLVSAYGIEKAQQIIELQSVEPPLD 191 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDAS 234 L W L + +VRL V LPG+ +G VQD + Sbjct: 192 L---TVKSDSIGWAERLGGVVLP-------NGSVRLNRLECSVSDLPGYREGAWWVQDFA 241 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 A L G+ + DLCA+PGGKT + A+V A+++ R+ R+ +N++RL Sbjct: 242 AALPACLLGELRGKRVADLCASPGGKTAQLA--LQGAEVTAIELSANRVKRLKENMERLY 299 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + QGD R Q FD +LLDAPCS+TG IRRHPDI W + D+ +LA LQ Sbjct: 300 FSVHIWQGDVRNFH---PTQLFDAVLLDAPCSSTGTIRRHPDILWTKSRDDVIKLAALQY 356 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE--------- 405 ++L A +K GG +V++ CS+ EE I+ L D L E Sbjct: 357 DLLVAAIALVKKGGRIVFSNCSLAREEGEDLIEKILSIRNDIVLDPIYPEEMGALAHLLS 416 Query: 406 QPGKQNLPGAE-------------EGDGFFYAKLIK 428 + + P DGFF A+L K Sbjct: 417 EGMVRTTPADFCHKNFDAEKTAPLGMDGFFAARLRK 452 >UniRef50_Q0ADT5 Fmu (Sun) domain protein n=50 Tax=Betaproteobacteria RepID=Q0ADT5_NITEC Length = 424 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 119/433 (27%), Positives = 186/433 (42%), Gaps = 45/433 (10%) Query: 12 AQAVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 AV +V+ +L + ++ ++++ E FG+LR L+ L K AR Sbjct: 12 IIAVRKVLPLQAPADVLLRQFFRDYPQLGQNGRSMIAETVFGILRHRFFLEVLTGKATAR 71 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 + L + +Q + R +L LI V ++ +Q Sbjct: 72 EL--------VLAYLARFQGMNLR--------------------ELTPLIREVESKWIQQ 103 Query: 129 QEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINRTHHSRDS 187 + + E R P WL+ +LQ+++ ++ + + Q P+ +R+N R+ Sbjct: 104 IKAVKLEEQPQFIRAEFPEWLVGKLQQSWSDEDILRLGQVLQQPAPLDIRVNSLLAKREE 163 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 +A+L + G++ P +RL ++ F G + VQD +Q LAP+ G Sbjct: 164 VIAVLKQEGIEAQSTPFSPVGIRLTGNPAINRNALFLSGKIEVQDEGSQILGFLLAPKRG 223 Query: 248 EHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 E ++D CA GGKT + + ++ A DI E+RL+ + LKR G+ Q Sbjct: 224 EMVVDFCAGAGGKTLLLGALMHSRGRLYAFDISEKRLNNLKPRLKRSGLSNVHPQHIDSE 283 Query: 307 PSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 + DR+L+DAPCS G +RR+PD+KW + I EL + Q IL A L Sbjct: 284 KDIKLKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQSPESINELQKKQIAILTAAAKLL 343 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG----------TPEQPGKQNLPG 414 K GG LVYATCS+LPEEN I+ FL + G Q P Sbjct: 344 KPGGRLVYATCSLLPEENQQVIERFLADHPQFSILNCGELLAQQKINLPDTGEFLQLSPL 403 Query: 415 AEEGDGFFYAKLI 427 DGFF A L Sbjct: 404 YHNTDGFFAAVLE 416 >UniRef50_P46087 Putative ribosomal RNA methyltransferase NOP2 n=28 Tax=Euteleostomi RepID=NOP2_HUMAN Length = 812 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 109/342 (31%), Positives = 157/342 (45%), Gaps = 36/342 (10%) Query: 120 GVLRQFQRQQEELLAEFN-------ASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQR 171 G+LR F Q+EE + Y + +LL +L +P + +EAN Sbjct: 248 GILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVP 307 Query: 172 PPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYP--DAVRLETPAPVHALPGFEDGWVT 229 P+ LR N R L G+ P + V ++ P+ A P + G Sbjct: 308 RPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYM 367 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYD 288 +Q AS+ + LAPQ E ILD+C APGGKT+++ ++ ++A D + +RL V Sbjct: 368 LQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVG 427 Query: 289 NLKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 NL RLG+ T+ DGR + G FDR+LLDAPCS TGVI + P +K + ++DI Sbjct: 428 NLHRLGVTNTIISHYDGRQFPKVVGG--FDRVLLDAPCSGTGVISKDPAVKTNKDEKDIL 485 Query: 348 ELAQLQSEILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT 403 A LQ E+L + + KTGG LVY TCS+ EEN + L++ + L TG Sbjct: 486 RCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR-NVRLVPTGL 544 Query: 404 PEQPG-----------------KQNLPGAEEGDGFFYAKLIK 428 ++ P DGFF AK K Sbjct: 545 DFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKK 586 >UniRef50_D2RG94 RNA methylase, NOL1/NOP2/sun family n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG94_ARCPR Length = 445 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 101/445 (22%), Positives = 196/445 (44%), Gaps = 42/445 (9%) Query: 14 AVEQVVEQG------QSLSNILPPLQQKVS-DKDKALLQELCFGVLRTLSQLDWLINKLM 66 + +V+ + Q ++ + D+ +L + + +++ L +D +I ++ Sbjct: 11 ILTEVLRKADEIKPSQYAKRMVFEKYNILGTHIDR-ILTAVYYKIMKRLGVIDKIIRDVV 69 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL---- 122 + + V + L++ + + + + ++K ++ L Sbjct: 70 GVHPNILDPWLRSALRVTIEFLVFEK-----------KYTKHLDKERVKKVVADFLSNVT 118 Query: 123 ------------RQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQ 170 + + E E + YL P+W ++++++ E+ + + +A N+ Sbjct: 119 HPYVGMYYFETFERIASYKLEPKDEIERLEFEYLLPAWYIRKMKELLGEEAEELFKAFNR 178 Query: 171 RPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTV 230 P + +R+N + + L G + + P ++ E P + G V Sbjct: 179 EPMISIRVNTLKATVKEVIDHLRRQGKEVIVSSVVPTVLKFEGPYDFDKSKLYRKGKFVV 238 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 Q+ ++ L P+ E ++DLCAAPGGKT H+ E+ + A D+DE RL R+ + Sbjct: 239 QEEASALASILLDPKPNETVVDLCAAPGGKTIHMAELMRNRGVIHAFDVDELRLKRMEEL 298 Query: 290 LKRLGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 +KR G+K + + D R GE D+++LDAPC++ G + ++P+++W R+ I E Sbjct: 299 IKRCGVKIVKIYKMDARKAVDVLGESIADKVMLDAPCTSDGTLMKNPELRWRIREEKIEE 358 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG 408 +AQLQ E+L+ LK G ++Y TCS+ EEN ++ L+ D +L G Sbjct: 359 IAQLQYELLNTGIDLLKPKGRILYCTCSIFREENEDVVERVLKERDDVKLVPLEGYYSEG 418 Query: 409 K-----QNLPGAEEGDGFFYAKLIK 428 + P GFFYA L K Sbjct: 419 FLKVTIRAFPHKHNTIGFFYALLEK 443 >UniRef50_Q0G330 Putative uncharacterized protein n=5 Tax=Rhizobiales RepID=Q0G330_9RHIZ Length = 473 Score = 350 bits (899), Expect = 6e-95, Method: Composition-based stats. Identities = 133/448 (29%), Positives = 207/448 (46%), Gaps = 37/448 (8%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPP-----LQQKVSDKDKALLQELCFGVLRTLS 56 K R +AA+ + V+EQ SL + P +++ +D+ L++ + LR Sbjct: 40 KPGLKARQVAAKLLGAVIEQQTSLDGLTDPDHGHPHFRQLEARDQGLVKAILLTALRFRG 99 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LK 115 L I + RP+ +++L+ V Q+ + +P AA+ V A A R + K Sbjct: 100 TLTQEIAARLDRPLPSNATALNHLLHVAAAQIRFLDVPDSAAVDLAVTAAEADPRTRRFK 159 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPM 174 G++N VLR+ R+ L ++ P+WLL+RL AY E + ++I A+ P+ Sbjct: 160 GVVNAVLRRMTRE---LGGAEVTTEPAIDCPNWLLERLIAAYGEPRAKAIAAAHRMPAPI 216 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 L ++W L + G + T + +L GF +G VQDAS Sbjct: 217 DL---TVKTDPEAWAERLGGQVVSGPSIR-----LDATTQGSIASLDGFAEGKWWVQDAS 268 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 A + G+ DLCAAPGGKT + V +A V A + + R R+ NL RL Sbjct: 269 AALPVRLFGDLTGKTAADLCAAPGGKTAQL--VLSDATVTACEASKSRAKRLVANLTRLA 326 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 A G + G++ FD +LLDAPCS+TG +RRHPD+ + D+ LA++Q Sbjct: 327 HDAETLIGP---FQETLGDRTFDAVLLDAPCSSTGTLRRHPDVGHTKSLDDVRRLAEVQR 383 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK----- 409 ++LDA H+ GGTLV++ CS+ P E +KAFL D E PG Sbjct: 384 KLLDAAANHVAPGGTLVFSNCSIDPIEGEELVKAFLAERKDFTRRPIEPTELPGFDKAVT 443 Query: 410 -----QNLPG----AEEGDGFFYAKLIK 428 + P DGF+ ++L + Sbjct: 444 SDGDLRTTPEMLSAIGGIDGFYASRLQR 471 >UniRef50_Q2RXU7 tRNA/rRNA cytosine-C5-methylase n=8 Tax=Alphaproteobacteria RepID=Q2RXU7_RHORT Length = 454 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 124/453 (27%), Positives = 183/453 (40%), Gaps = 41/453 (9%) Query: 1 MKKQRNLR-SMAAQAVEQVVEQGQSLS---NILPPLQQKVSDKDKALLQELCFGVLRTLS 56 M R A + + + + ++ + KD+ + L + LR + Sbjct: 1 MTPA--ARVQCAIDLLVDIDATNRPADGIASAFVRARRFMGSKDRRAVTALAWSTLRHRA 58 Query: 57 QLDWLINKLMARPMTGKQRTVHYLI--MVGLYQ--LLYTRIPPHAALAETVEGAIAIKRP 112 +L WLI++ P H L+ +L+ HA + + A Sbjct: 59 RLSWLIDRFGGTPKARALVIAHLLVVERQSAEDVRMLFITRAQHAP--QPLTDAEERLVD 116 Query: 113 QLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRP 172 L G + L +D R P WL L+ + E+ + + A Sbjct: 117 GLAG-------------KPLEFREMPADVRLEVPDWLPPLLEPLFGERLEDELRALQAEA 163 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P+ LR+N R+S L + P A P A+R E V F DG V VQD Sbjct: 164 PLDLRVNALKSDRESARLALAREQVDTRPGALSPCALRAEGRPNVAITAPFCDGLVEVQD 223 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLK 291 +Q A G +LDLCA GGKT + + + +VA DI E RL+R L+ Sbjct: 224 EGSQMVALLCAVAPGMSVLDLCAGAGGKTLALAAGMENKGTLVATDISEGRLARAQTRLQ 283 Query: 292 RLGMKATVKQGDGRYPSQWCGEQQ--FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL 349 R G+ ++ +W ++ FD +L+DAPCS TG RR+PD +W I L Sbjct: 284 RAGVHNVTRKVLDPETRKWLKRRKASFDVVLVDAPCSGTGTWRRNPDARWKLTPDTISAL 343 Query: 350 AQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE--------- 400 QS +LD +K GG LVYATCS+LP EN QI AFL+R D Sbjct: 344 NAEQSALLDRAAALVKPGGRLVYATCSLLPAENEAQIAAFLERRDDYRALPVAETWAKVS 403 Query: 401 ----TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 G + + P + DGFF + L ++ Sbjct: 404 PAPYPGAADVSWLRLTPASHGTDGFFVSILERQ 436 >UniRef50_C2GHU0 16S rRNA M(5)C 967 methyltransferase n=1 Tax=Corynebacterium glucuronolyticum ATCC 51866 RepID=C2GHU0_9CORY Length = 620 Score = 348 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 128/497 (25%), Positives = 187/497 (37%), Gaps = 88/497 (17%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R + A+ V G + LP + +S +D A E+ +G +R + LD +I Sbjct: 138 DTPRLITLSALGAVFNDGAYGNIALPREITEAGLSGRDAAFATEIGYGTMRMVGVLDEII 197 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 +RPM+ V + +G+YQLLYTR+ HAA+ +V ++KG +N +L Sbjct: 198 GSCSSRPMSELDPIVLNALRMGIYQLLYTRVEDHAAVDTSVRLV----PQRVKGFVNAIL 253 Query: 123 RQFQRQQ-EELLAEFNA------SDARYLHPSWLLKRLQKAYP----------------- 158 R Q++ E+ + E R HP W+ + Sbjct: 254 RAVQKKPLEQWIEELAPEGKLAQLAFRTGHPEWIARSYLATLSAPSGAVPSANGVGTESS 313 Query: 159 --------------------------------EQWQSIVEANNQRPPMWLRINRTHHSRD 186 ++ +EA++ RP + L S D Sbjct: 314 ADGARADASAARSDPSTDPSAEPSTGSSTILFDELAKALEADSTRPIVHLAAKPGEISAD 373 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL---A 243 L G A P AV LE P ++ +QD +Q L Sbjct: 374 ELA--LITGG---EEGAYSPYAVYLEGGNP-ADFEPVQEKLAFIQDEGSQLIGAALVRVD 427 Query: 244 PQNGE-HILDLCAAPGGKTTHILEVA--PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 N LDLCA PGGK T I +A A V AV+I R + + G+ TV Sbjct: 428 VDNDAGRWLDLCAGPGGKATMIGSLAAIDGATVTAVEIAPHRGDLIRKATE--GLPVTVV 485 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 GDGR FDR+L+DAPCS G +RR + +W + + DI EL LQ E+L+A Sbjct: 486 VGDGRTVDV---GSSFDRVLVDAPCSGLGSLRRRQESRWTKDESDIEELTALQYELLEAG 542 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAF--------LQRTADAELCETGTPEQPGKQNL 412 K GG +VY+TCS E + L + + Q Sbjct: 543 VSRCKPGGVVVYSTCSPDLRETREIVDKALVTLPVEELDAHPLVAPMD-NVGREKSVQMW 601 Query: 413 PGAEEGDGFFYAKLIKK 429 D F+A L KK Sbjct: 602 TYRHGTDSMFFAVLRKK 618 >UniRef50_Q2T2A8 Sun protein n=76 Tax=Proteobacteria RepID=Q2T2A8_BURTA Length = 571 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 155/438 (35%), Positives = 229/438 (52%), Gaps = 23/438 (5%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 + A AV + +L+ + L + +Q++ + +R DWLI +L+A+ Sbjct: 140 AQAVDAVTRGAALPAALAAVHATLPANARAASRGAIQDIAYRAMRRRGTADWLIAQLVAK 199 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTR----IPPHAALAETVEGAIAIKR-PQLKGLINGVLR 123 VH L++ L+ P + + V A + KGL+N VLR Sbjct: 200 APPAH---VHALLVCAFALLVDDDEHAAYAPFTVVDQAVTAIGARRECSFAKGLVNAVLR 256 Query: 124 QFQRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTH 182 +F R++ L + AR+ + W + +++A+P+ W I+ + + P+ LR+N Sbjct: 257 RFLRERAVWLERLQSDRRARWNYEPWWIDAVERAWPDAWPRILASGDAPGPLTLRVNARR 316 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 + D++L +L + + A+RL + PV +PGF DG V+VQDA AQ WL Sbjct: 317 MTADAYLDVLRAERIDAEKVGRH--AIRLASALPVERIPGFADGIVSVQDAGAQLAAEWL 374 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 ++G +LD CAAPGGKT HILE+A A+VVA++ D R R+ +NL RL + A V+ G Sbjct: 375 GARDGMRVLDACAAPGGKTGHILELA-HAEVVALESDPARAPRIGENLARLSLAADVRVG 433 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 D PSQW + FDR+L D PCSA+G++RRHPDI+WLRR DIP L Q IL A+WP Sbjct: 434 DAGDPSQWHDGRAFDRVLADVPCSASGIVRRHPDIRWLRRAADIPALVAEQRRILSALWP 493 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL---------- 412 +K GG L+YATCS+ PEE LQ + F DA + P Sbjct: 494 LVKPGGELLYATCSIFPEEGELQARWFGDACQDAVRLDAPGQLLPQGATGGAPAAGGSDE 553 Query: 413 PGAE-EGDGFFYAKLIKK 429 PG + DGFFYA+ K+ Sbjct: 554 PGRHVDHDGFFYARFQKR 571 >UniRef50_B3R820 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent n=2 Tax=Cupriavidus RepID=B3R820_CUPTR Length = 477 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 165/467 (35%), Positives = 235/467 (50%), Gaps = 53/467 (11%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQKV------SDKDKALLQELCFGVLRTLSQLDWLINK 64 AA AV V +G +L + ++ + LQ++ + +R L+ K Sbjct: 15 AATAVRAV-SEGTALPQAIEDAAAQLKLDRVRDAATRGALQDIAYRTMRQFGTARALVTK 73 Query: 65 LMARPMTGK------------------QRTVHYLIMVGLYQLLYTRIPPHA---ALAETV 103 L+ RP + R H ++ R P ++ + + V Sbjct: 74 LVTRPPGAQVDSLLAVALALLLEHGPGPRDRHDGADAARHEADAGR-PGYSTFTVVDQAV 132 Query: 104 EGAIAIKR-PQLKGLINGVLRQFQRQQEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQW 161 A + + +GL+N VLR+F R+++ LLAE N + AR+ P W L+ L++AYP+QW Sbjct: 133 SAAASEPKTAHARGLVNAVLRRFLRERKALLAEVNRDEQARWNLPPWWLRLLREAYPDQW 192 Query: 162 QSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALP 221 ++ + N RPPM +R+N S + L AG+ G P AVRL PV+ LP Sbjct: 193 MALAASANVRPPMTVRVNTARVSVPQYRTDLANAGLAGHVVG--PQAVRLVRAVPVNQLP 250 Query: 222 GFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQ 281 GF +G V+VQDA AQ L +G +LD CAAPGGKT H+LE+A + +V AV+ D Q Sbjct: 251 GFAEGVVSVQDAGAQLAAPLLEVADGMRVLDACAAPGGKTGHLLELA-DIEVTAVESDPQ 309 Query: 282 RLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR 341 R +R+ +NL RLG A + GD P+ W Q FDRIL D PCSA+G++RRHPDI+WLR Sbjct: 310 RATRIGENLARLGKSAKIVVGDASRPADWWDGQPFDRILADVPCSASGIVRRHPDIRWLR 369 Query: 342 RDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET 401 R+ DI L Q I+ +WP LK GG LVY TCS+ P E Q + F ++ ADA + Sbjct: 370 RETDIARLITEQRRIVSQLWPLLKPGGILVYVTCSIFPTEGEEQARWFGEQLADAIRLQA 429 Query: 402 GTPEQPGKQNLPGA-------------------EEGDGFFYAKLIKK 429 PG A + DGFFYA+ K+ Sbjct: 430 PGQLLPGTHATLAAGADGDKATLDSSTDGTSLPSDHDGFFYARFQKR 476 >UniRef50_A4T0M4 Sun protein n=2 Tax=Polynucleobacter necessarius RepID=A4T0M4_POLSQ Length = 438 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 157/443 (35%), Positives = 228/443 (51%), Gaps = 33/443 (7%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLI 62 ++AAQA+ +V+ G+SL+ +L + ++ ++Q L F LR + LI Sbjct: 11 PLSEAITIAAQAISEVM-SGRSLTEVLDE----LDAHERPIVQSLTFDALRKWVRSHELI 65 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPP-----HAALAETVEGAIAIKRP-QLKG 116 + + + V +L+ V + + H + + V + KG Sbjct: 66 KQFVPKTPP---PEVDHLLSVAIALFIRNDADDKGYAVHTVVDQAVRACGEYDQTLYAKG 122 Query: 117 LINGVLRQFQRQQEELLAE--FNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPM 174 L+N VLR+ + + + + P W L++ Y + WQ+I+ A +R P+ Sbjct: 123 LVNAVLRKVSLALQPVADKPFYPPDPIAMFVPPWWRASLKRNYSKDWQAILFAQAKRAPL 182 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHAD-----YPDAVRLETPAPVHALPGFEDGWVT 229 LR+N+ +SRD + ALL E+G++ P P A+ L PV LPGF G V+ Sbjct: 183 ILRVNQKQYSRDEYRALLTESGIQSKPINAIAGISLPSALLLPDAVPVSDLPGFYSGAVS 242 Query: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN 289 VQDA AQ T L PQ E ILD CAAPGGKT H+LE+A + Q+ A+++D +RL ++ N Sbjct: 243 VQDAGAQLAATLLNPQADELILDACAAPGGKTAHLLELA-DCQMRALELDGKRLGKIGGN 301 Query: 290 LKRLGMK---ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 L RL + A V +GD S W FD+IL+DAPCSA+G++ RHPDI +LRR+ DI Sbjct: 302 LDRLRLHSEKAKVLRGDASK-SAWWDGVPFDKILIDAPCSASGIVARHPDIPFLRRESDI 360 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ 406 P L Q Q EIL W LK+GG L+Y TCSV PEE Q F Q ++A + Sbjct: 361 PVLQQRQREILTQAWKMLKSGGILLYVTCSVFPEEGEDQAVWFAQEHSNALRLDAP---- 416 Query: 407 PGKQNLPGAEEGDGFFYAKLIKK 429 Q LP DGF+YA K Sbjct: 417 --GQLLPTDAN-DGFYYALFKKN 436 >UniRef50_C1F543 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F543_ACIC5 Length = 440 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 130/449 (28%), Positives = 197/449 (43%), Gaps = 40/449 (8%) Query: 6 NLRSMAAQAVEQVVEQGQSLSNILPPLQ-QKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A ++++ +L ++ ++ +D+ L+ L G LR LD ++ + Sbjct: 4 PARRVAFDLLQRMATSDAHSDELLRTMKVNALAAQDRNLVTTLVLGTLRWQPALDQILLQ 63 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLINGVLR 123 + RP V + +G +QLL+ R+PPHA L ++VE GL+N VLR Sbjct: 64 FLTRPDQRLSEPVRAALRLGAFQLLHLDRVPPHAVLNDSVELVKLSNEAYATGLVNAVLR 123 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH 182 + + A+ +L R ++ + E Q+I E + Q P+ LR+ + Sbjct: 124 KVMHMPRGAGMDAAAAHPAWL-----AARWRRHFGAEAAQAICEYDQQASPVALRVQSAN 178 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 L G++ P DA R+ V F +G V VQD +Q Sbjct: 179 P-----AEELTGEGVECAPGEWLNDACRVL-RGDVARTQAFAEGRVRVQDEGSQLVAELA 232 Query: 243 APQNGE--HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK 300 A E +LD CAAPGGKT + E EA++VA++I E+R ++ NLK + Sbjct: 233 AAAMPEAKRVLDACAAPGGKTAVLAERLAEARIVALEISERRREQMKRNLKAYEGRVECV 292 Query: 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI 360 GD E ++D IL DAPCS TG + R+P+I+ D+ Q IL + Sbjct: 293 AGDASALPA---EPEYDLILCDAPCSGTGTMARNPEIRLRVYPEDLTRQQARQVAILRGV 349 Query: 361 WPHLKTGGTLVYATCSVLPEENSLQIKAFLQR--------TADAE-LCETGTPEQPG--- 408 LK GG +VYATCS+ PEEN ++A R T E L G + G Sbjct: 350 AGALKPGGRVVYATCSLEPEENEDVVRAVAARVGLRVVEMTPLVEQLAARGVLTERGREN 409 Query: 409 ---------KQNLPGAEEGDGFFYAKLIK 428 + LPG DGFF A L + Sbjct: 410 VLAAITNDQLRTLPGVHPCDGFFAAVLER 438 >UniRef50_B7GI32 Sun, tRNA and rRNA cytosine-C5-methylase fused to uncharacterized domain n=4 Tax=Bacillaceae RepID=B7GI32_ANOFW Length = 457 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 84/303 (27%), Positives = 127/303 (41%), Gaps = 22/303 (7%) Query: 145 HPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD 204 P + ++ ++ + N+ LRIN S ++ L+ + + P Sbjct: 9 LPKEFVTKMNALLQDEAERFFATYNEEKVNGLRINSLKVSPSTF---LNISPWELEPIPF 65 Query: 205 YPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI 264 P P P G +Q+ SA LAP GE +LDLCAAPGGKTT + Sbjct: 66 CPTGFYYYNAQP-GKHPYHAAGLYYIQEPSAMFVAEVLAPSPGERVLDLCAAPGGKTTQL 124 Query: 265 LEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 + ++A +I +R+ + +N++RLG+ V + E FD+IL+DA Sbjct: 125 AALMNNEGFLLANEIHPKRVKALSENIERLGITNAVVTNETPEKLSETFEGFFDKILVDA 184 Query: 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 PCS G+ R+ + + + AQ Q IL + L GGTLVY+TC+ PEEN Sbjct: 185 PCSGEGMFRKDEEAIQFWSLEHVQKCAQTQRHILSCAYKMLSEGGTLVYSTCTFSPEENE 244 Query: 384 LQIKAFLQRTADAELCETGTPEQ-----------------PGKQNLPGAEEGDGFFYAKL 426 I FL D EL + P +G+G F AK+ Sbjct: 245 QIIDWFLATYEDMELIPIEKKHGIQPGVSHWTNTHRGNIAHTARLWPHHLKGEGHFVAKM 304 Query: 427 IKK 429 K+ Sbjct: 305 RKR 307 >UniRef50_Q1D976 Methyltransferase, RsmB/NOP family n=2 Tax=Cystobacterineae RepID=Q1D976_MYXXD Length = 472 Score = 347 bits (890), Expect = 7e-94, Method: Composition-based stats. Identities = 103/451 (22%), Positives = 173/451 (38%), Gaps = 35/451 (7%) Query: 2 KKQRNLR-----SMAAQAVEQVVEQGQSLSNILPPLQQK---VSDKDKALLQELCFGVLR 53 + +R LR +A V +G+ L ++ + ++ + E +G+LR Sbjct: 31 RPERPLREDLVLQACLEAYGSVRHEGRMADRALDFTLRRKANLYSNERRAVAERVYGLLR 90 Query: 54 TLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ 113 +D+L+++ R + + ++ + ++LY PH +A A + Sbjct: 91 RQRTVDFLLSRAHPR-FDSLETSRQDVLRLAASRVLYGE--PHGLVARQSALAPPDAQAL 147 Query: 114 LKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPP 173 E L P +L R + + EA N+R P Sbjct: 148 GAL-------PEAAAALEALPARERFPIAASLPDFLADRFLQTFGRDAARAAEAMNERAP 200 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233 + R N RD+ L + P P + LET +L F +G + +QD Sbjct: 201 LVARANLLKGDRDALAQRLKAETVDVKPTPLSPMGLVLETRINAFSLESFREGMLELQDE 260 Query: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKR 292 +Q + ++D CA GGKT + + A+DIDE+R+ + +R Sbjct: 261 GSQLLGMLVDA-PPTRVVDACAGAGGKTLQLAAQMKNRGDLHALDIDERRMEDLKKRARR 319 Query: 293 LGMKATVKQ-----GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP 347 G+ Q G + + + DR+L+DAPCS TG RR PD ++ D+ Sbjct: 320 AGVHNVRAQLIPHEGPEADAALTPLKGKADRVLVDAPCSGTGTFRRKPDARYRLTPEDLE 379 Query: 348 ELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG----- 402 Q +L +K GG L+Y TCSVL EEN ++ FL + + + Sbjct: 380 MHVGRQKALLARFATLVKPGGRLIYGTCSVLREENENVVEDFLAKHPEFTVKPVAELLGA 439 Query: 403 -----TPEQPGKQNLPGAEEGDGFFYAKLIK 428 P + P DGFF A L++ Sbjct: 440 ELAEKVGPGPFLRLAPHTHGTDGFFGAVLVR 470 >UniRef50_Q1MPZ7 TRNA and rRNA cytosine-C5-methylases n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MPZ7_LAWIP Length = 447 Score = 346 bits (889), Expect = 8e-94, Method: Composition-based stats. Identities = 119/449 (26%), Positives = 200/449 (44%), Gaps = 35/449 (7%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLD 59 KK + R +A A++++ ++GQ + +L + +S +D AL+ EL +G LR ++ Sbjct: 13 KKTKTAREIATIALQKI-KEGQPIQVLLNNILLTYPLSKQDIALVTELVYGYLRLEIRIV 71 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLY-TRIPPHAALAETVEGAIAIKRPQLKGLI 118 W++ + + + V +I + Y+LL+ +IPP+A + V + L G+ Sbjct: 72 WILEQFLKKS-EHLPYEVKLIIGLATYELLFLDKIPPYATIHTAVSTIKSKFGKILAGVA 130 Query: 119 NGVLRQFQRQ-------------QEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSI 164 N L+ R+ ++ L + + Y P W++K Y ++ + Sbjct: 131 NASLQTIFRKSKHNDGPKYNTFYKQRLPEDIHYLSIWYSIPLWIIKLWISNYGTQKTLKL 190 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 ++ QRP +R+N + + L + G G P + + L + Sbjct: 191 AASSLQRPYFCIRVNPIYDNWRELYENLCQNG--GIPIGRS--GIYFKPNRKPKELQYYL 246 Query: 225 D-GWVTVQDASAQGCMTWLAPQNGE-HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQR 282 + G++++Q A +Q M L Q + I D CA GGKT+ +LE A DI + Sbjct: 247 EQGYISIQGAGSQIVMDALDIQTWKIPIWDACAGRGGKTSLLLEWGIPIF-AASDISLSK 305 Query: 283 LSRVYDNLKRLGM-KATVKQGDGRYP-SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL 340 L + KRL + ++ P + Q ILLD PCS G + RHPDIK Sbjct: 306 LQGLIAETKRLKLLTPSIFCSSSTQPALKNVLCSQLKTILLDVPCSGLGTLSRHPDIKKF 365 Query: 341 RRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE 400 R +D+ +L QLQ +IL+ W L G L+Y TC+V P EN Q+ FL+ A L Sbjct: 366 RTPKDVDKLIQLQKKILNTAWEFLPPQGELIYITCTVNPSENEQQVIQFLKDYPQASL-- 423 Query: 401 TGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + + +P D F A + KK Sbjct: 424 -----KKQWEGIPDRFGTDIMFGAIIQKK 447 >UniRef50_A7HSA7 Fmu (Sun) domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HSA7_PARL1 Length = 433 Score = 346 bits (889), Expect = 8e-94, Method: Composition-based stats. Identities = 114/451 (25%), Positives = 175/451 (38%), Gaps = 45/451 (9%) Query: 1 MKKQRNLR-SMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLS 56 M R A + + + G+ + + KD+A + +L F VLR + Sbjct: 1 MTPG--ARLQSAISVLSDIFKSGRPADRVFDTWARSNRYAGSKDRAAVSDLVFTVLRRRA 58 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQL-K 115 +L + AR + + +G Q + AALA+ A P+ Sbjct: 59 ELTAAVGSDDARLLAF------AALTLGAEQ----GVDEVAALADGARHAPEPLSPEEQT 108 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMW 175 L VL E R+ +P WL + A+ + + A +R P Sbjct: 109 ALSMAVL----------PGESAPPWTRFNYPEWLHPEFEAAFGNGLEREMAAFMERAPTD 158 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 LR+N R+ LA L G+ P +RL + V L F DG V +QD + Sbjct: 159 LRVNTLKMKREKALAALTGEGLSAEATPWSPWGLRLTSRGNVLGLATFRDGIVEIQDEGS 218 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG 294 Q GE ++DLCA GGK+ + + Q+ A D D +RLS + ++R G Sbjct: 219 QLACLLAGAAPGEQVVDLCAGGGGKSLALAAMMKNHGQIYACDTDARRLSGLTPRVRRAG 278 Query: 295 MKATVKQGDGRYPSQWCGEQ------QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 ++ + G + + D +L+DAPCS TG RR P +W + Sbjct: 279 IRNLQTRVLGPFTPDMADKDLAGLASHADCVLVDAPCSGTGAWRRSPGARWSLSPEMLMG 338 Query: 349 LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG------ 402 Q+E+L ++ GG LVY TCS+LP EN Q++AFL Sbjct: 339 YRAAQAEVLTRGARLVRPGGRLVYVTCSLLPSENETQVEAFLAVHPAFTPQPWASNWPEH 398 Query: 403 -----TPEQPGKQNLPGAEEGDGFFYAKLIK 428 P + P + DGFF A L + Sbjct: 399 VPLPPAPHGNWLRLTPASTGTDGFFVAILRR 429 >UniRef50_A9BNV4 Fmu (Sun) domain protein n=2 Tax=Comamonadaceae RepID=A9BNV4_DELAS Length = 470 Score = 346 bits (889), Expect = 8e-94, Method: Composition-based stats. Identities = 111/455 (24%), Positives = 181/455 (39%), Gaps = 40/455 (8%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQ 57 M ++ L A+ V++ + ++ + + +++A L E + VLR Sbjct: 29 MHPKQLL-DACAELVKRTLTFEHPADAVVSRFFRENRNLGPRERAALAETAYTVLRKKLL 87 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHA--ALAETVEGAIAIKRPQLK 115 + L ++ Q R+ + + E + A A PQ Sbjct: 88 FESLARSGSGSRERRL-----AILGFAHSQEALARVAGKSEQGVKEALGFARAALSPQEL 142 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMW 175 ++ + + + R+ P WL+ L++ E + + ++ Q P+ Sbjct: 143 QWLDAC--------DAVRPDELMEPHRHNLPEWLVAPLKQQLGEDFWAFAQSMEQAAPLD 194 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 LR+N + R L +AG+ P +R++ + L F G + VQD + Sbjct: 195 LRVNALNAKRADVQKELADAGIAAEATPYSPWGLRVQGKPALARLDAFTRGAIEVQDEGS 254 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 Q L + GE ++D CA GGKT I + ++ A D+ RL + L R G Sbjct: 255 QLLALMLDAKRGEMVVDFCAGAGGKTLAIGASMRSTGRLYAFDVSGHRLEALKPRLARSG 314 Query: 295 MKATVKQGDGRYPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 + + DR+L+DAPCS G +RR+PD+KW + + I EL Q Sbjct: 315 LSNVHPAAIAHERDDRVKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQSAKAIEELTQK 374 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA---------------- 396 Q+ IL + +K GG LVYATCSVLP+EN +AF +D Sbjct: 375 QAAILASAARLVKPGGRLVYATCSVLPQENEAIAEAFASEHSDFVAMDAGELLAQLKVEQ 434 Query: 397 --ELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK 429 LC G + P E DGFF A +K Sbjct: 435 GNALCSGGETGTQYLRLWPQRHETDGFFAAVWTRK 469 >UniRef50_C7I4U3 Sun protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I4U3_THIIN Length = 457 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 173/446 (38%), Positives = 234/446 (52%), Gaps = 22/446 (4%) Query: 2 KKQRNLRS--MAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQ 57 QR LR +A + V+ G SLS LP + K + Q L F VLR L Sbjct: 13 SAQRPLRRDLIACAQLIGAVQAGASLSTALPQAATRGKWDASQRGAAQALSFAVLRHLGT 72 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYT---RIPPHAALAETVEGAIAI-KRPQ 113 + L+ L +P+ + ++ L LL H + + VE Sbjct: 73 VRALLTDLQPKPIH--PPLLRDVLQTALALLLPDAPAHYAAHTVVNQAVEACKRTPSLRH 130 Query: 114 LKGLINGVLRQFQRQQEELLA-EFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRP 172 +G N +LR+F + ++ A +AR+ HP W ++ LQ AYP WQ ++E ++P Sbjct: 131 AQGFANALLRRFVSRTADIEAVRMRTLEARWNHPDWWVQALQSAYPADWQGVLEVAQRQP 190 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFP--HADYPDAVRLETPAPVHALPGFEDGWVTV 230 M LR+N SR ++ A L G+ A+ L+ V LPGFE GWV+V Sbjct: 191 AMTLRVNPRLQSRTAYQAALAACGLPCTAPDDPLLDQALILKQAVAVERLPGFERGWVSV 250 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNL 290 QDA+AQ L Q G+ +LD CAAPGGKT H+LE + ++A+D D QRL RV D L Sbjct: 251 QDAAAQYAAALLDVQPGQRVLDACAAPGGKTAHLLERC-DCDLLALDKDAQRLRRVEDTL 309 Query: 291 KRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELA 350 RLG++A D +P+ W Q FDRILLDAPCSA+G+ RRHPDI+WLRR DIP LA Sbjct: 310 DRLGLQARTLAADAAHPATWWDGQPFDRILLDAPCSASGIARRHPDIRWLRRAADIPALA 369 Query: 351 QLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG---TPEQP 407 Q+ +LDA+WP L+ GG L+Y TCSV P+E Q +AFL R ADA P++P Sbjct: 370 ATQAVLLDALWPLLRPGGKLLYVTCSVFPQEGVEQARAFLARHADAIASPAPGQLLPQEP 429 Query: 408 GK---QNLPG--AEEGDGFFYAKLIK 428 ++ PG DGFFYA K Sbjct: 430 AFDQTRDDPGAARHSQDGFFYALFTK 455 >UniRef50_B9JUI9 Sun protein n=44 Tax=Rhizobiales RepID=B9JUI9_AGRVS Length = 493 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 123/458 (26%), Positives = 202/458 (44%), Gaps = 45/458 (9%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTLS 56 K R A++ + V+++ SL ++ P +S+ D+ L++ + LR L Sbjct: 49 KPGLEARMAASRLLAAVIDRKTSLDGMMDGDHGNPAYAALSEADRGLVRAILNTSLRFLP 108 Query: 57 QLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKR-PQLK 115 +++ ++ +L+ P+ R +++ ++V Q++Y +P H+A+ VE A R + Sbjct: 109 RIEAMLARLLDAPLPDGARALYHSLIVAAAQMVYLDVPDHSAVDLAVEQANRDPRSRRFA 168 Query: 116 GLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPM 174 L+N VLR+ R+++ LLA+ P W +RL Y E+ + I +A + Sbjct: 169 KLVNAVLRRLGREKQALLADVEDVIC---MPDWFFERLIAVYGEEEARRIAQAQLTPAAI 225 Query: 175 WLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDAS 234 L W L+ + A V ALPGFE+G VQDA+ Sbjct: 226 DL---TVKADPAVWAEKLNGVVLPTGSIRLASFA------GAVSALPGFEEGAWWVQDAA 276 Query: 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 A + G+ +DLCAAPGGKT + AV+ RL R+ NL+RLG Sbjct: 277 AALPVRMFGSLEGKRAVDLCAAPGGKTAQLAAAGAVVT--AVEQSANRLKRLNGNLQRLG 334 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 A + D + FD +LLDAPCS+TG RRHPD+ + + +DI +LA +Q Sbjct: 335 FSAQLVHQDLMEFNLGEDHPGFDAVLLDAPCSSTGTTRRHPDVFYTKGPQDIVKLAGVQE 394 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG------ 408 +L L GG++V++ CS+ P+E + L + E + PG Sbjct: 395 RLLRHAVTLLAPGGSIVFSNCSLDPQEGEDVVARVLADHPELERVAMQVADWPGLEDAIT 454 Query: 409 ----KQNLP--------------GAEEGDGFFYAKLIK 428 + P A DGF+ +L + Sbjct: 455 PLGEFRTTPAMLPGPAMLPGGDSHAGGLDGFYACRLRR 492 >UniRef50_P71675 Putative methyltransferase Rv1407/MT1451 n=56 Tax=Actinomycetales RepID=Y1407_MYCTU Length = 457 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 124/453 (27%), Positives = 186/453 (41%), Gaps = 40/453 (8%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLI 62 R A + + V + + +LP L + + +D A EL +G R LD +I Sbjct: 14 DPARRAAFETLRAVSARDAYANLVLPALLAQRGIGGRDAAFATELTYGTCRARGLLDAVI 73 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 R + L+ +G YQLL TR+ HAA++ TVE A G +NGVL Sbjct: 74 GAAAERSPQAIDPVLLDLLRLGTYQLLRTRVDAHAAVSTTVEQAGIEFDSARAGFVNGVL 133 Query: 123 RQFQ-RQQEELLAEFNASD---------ARYLHPSWLLKRLQKAYPE---QWQSIVEANN 169 R R + + E + HP W+ + A + ++++ +++ Sbjct: 134 RTIAGRDERSWVGELAPDAQNDPIGHAAFVHAHPRWIAQAFADALGAAVGELEAVLASDD 193 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 +RP + L + ++G P AV L P L DG Sbjct: 194 ERPAVHLAARPGVLTAGELARA-----VRGTVGRYSPFAVYLPRGDP-GRLAPVRDGQAL 247 Query: 230 VQDASAQGCMTWLAPQN----GEHILDLCAAPGGKTTHILEVAPE--AQVVAVDIDEQRL 283 VQD +Q L LDLCA PGGKT + + + A+V AV+ R Sbjct: 248 VQDEGSQLVARALTLAPVDGDTGRWLDLCAGPGGKTALLAGLGLQCAARVTAVEPSPHRA 307 Query: 284 SRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 V N + G+ + + DGR+ G FDR+L+DAPC+ G +RR P+ +W R+ Sbjct: 308 DLVAQNTR--GLPVELLRVDGRHTDLDPG---FDRVLVDAPCTGLGALRRRPEARWRRQP 362 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT--------AD 395 D+ LA+LQ E+L A + GG ++YATCS E + L+R Sbjct: 363 ADVAALAKLQRELLSAAIALTRPGGVVLYATCSPHLAETVGAVADALRRHPVHALDTRPL 422 Query: 396 AELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 E G E P Q P D F A L + Sbjct: 423 FEPVIAGLGEGPHVQLWPHRHGTDAMFAAALRR 455 >UniRef50_D0GJC1 Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GJC1_9FUSO Length = 442 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 109/441 (24%), Positives = 201/441 (45%), Gaps = 24/441 (5%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ--KVSDKDKALLQELCFGVLRTLSQLDW 60 ++ N++ +++++ G+ + L + K+K + + ++ L +D+ Sbjct: 10 QKDNIKIDIVNLLDEIM-SGKYSNIQLNHYFKTKNYLKKEKLFITNIINITIKNLIYIDY 68 Query: 61 LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING 120 L+ K + ++R + L+ + + QL +T L E VE A I Q G +N Sbjct: 69 LLEKTVK---NIQKRKIKQLLRISVAQLFFTEADNAGVLYEAVEVAKIINNHQ-SGFVNA 124 Query: 121 VLRQFQRQQEELL---AEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLR 177 L+ R ++E++ + Y +P W + +++ YPE + I+++ R + +R Sbjct: 125 TLQSVLRNKDEIIENIPKDRKDGILYSYPQWFVNKMKVDYPEDYIDIMKSYKSRSYLSVR 184 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQG 237 N ++D + +L E D V + + + +++G + +QDAS+ Sbjct: 185 YNSKKLTKDRFEKILSEVKSG---ILFSADEVYYLSNSNIFDTEEYKNGNIIIQDASSYL 241 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA 297 + L + G+ +LD CAAPGGK+ IL+ +VA DI E ++ + + K+ Sbjct: 242 AVKNLNVEKGDVVLDACAAPGGKSLAILQNFEPELLVAEDIHEHKIKILENMKKKYNFSN 301 Query: 298 -TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 V D +FD+ILLD PCS GV+R+ P+ + I L +LQ +I Sbjct: 302 LKVVLNDATQIESL--NMKFDKILLDVPCSGLGVLRKKPEKIYDLTGEQIKSLKKLQKKI 359 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE--------QPG 408 D+ + LK G ++Y+TC+ EN+ ++ FL++ D + E PE G Sbjct: 360 FDSAYNSLKENGIILYSTCTFSINENTNNLEYFLEKYRDLVIEEVVIPENVDIRKDQWGG 419 Query: 409 KQNLPGAEEGDGFFYAKLIKK 429 DGF+ AKL KK Sbjct: 420 VYITHKNIYNDGFYIAKLRKK 440 >UniRef50_C5SHX2 Sun protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SHX2_9CAUL Length = 464 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 138/438 (31%), Positives = 202/438 (46%), Gaps = 35/438 (7%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL-QQKVSDKDKALLQELCFGVLRTLSQLDWLINKL 65 R A VE +E+ K+S+ ++A L VLR L QLD +I Sbjct: 45 ARVAAITLVEAALEKRSGFDEAAASADFLKLSETERAFAGALALLVLRRLGQLDHVI--- 101 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ-LKGLINGVLRQ 124 + V L+ +G+ Q+ + ++P AA++ TV+ A + + KGLIN +LR Sbjct: 102 HKKTQKMPPEAVRQLLRIGMAQIFFMQVPDFAAVSTTVKIAERENKTRPFKGLINAILRG 161 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHS 184 R + + + + L P WL +R + Y E+ + + + P R Sbjct: 162 LIRDG-----KLSDVNPKRLVPDWLWQRWVQTYGEENAAGMASVLTEEPATDLSFRNPTD 216 Query: 185 RDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 RD L + P +R + ++ G VQD +A + L Sbjct: 217 RDGLAEALQGEAVG-------PVNLRSSLRGDLRQWADYDAGKWWVQDIAAATPVNLLGD 269 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 NG+ LD+CAAPGGKT + +A AQ VA+D + RL RV DNLKR+GM A + D Sbjct: 270 LNGKTALDVCAAPGGKTLQL--IAKGAQTVAIDRSKNRLKRVEDNLKRIGMSAEIHNADA 327 Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 + FD +L+DAPCSATG RR PD+ W R D+ +LA +Q +LDA+ P + Sbjct: 328 STFDD---PRAFDVVLVDAPCSATGTYRRQPDVLWATRPADVAKLADVQHRLLDALAPRV 384 Query: 365 KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP-----------GKQNLP 413 K GG +Y TCS+ EE QI AFL+R D L + + P + LP Sbjct: 385 KPGGDFLYCTCSLEREEGETQILAFLRRNKDFTLVKHTADQHPDIPAASFAPEGWLRLLP 444 Query: 414 GAEEG--DGFFYAKLIKK 429 +G DGFF A L + Sbjct: 445 HQRKGGQDGFFVAHLKRN 462 >UniRef50_C6XFI6 Fmu (Sun) domain protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFI6_LIBAP Length = 445 Score = 343 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 122/458 (26%), Positives = 214/458 (46%), Gaps = 48/458 (10%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILP-----PLQQKVSDKDKALLQELCFGVLRTL 55 MK N R +++ + V+ + SL+ +L + +S +D+ L++ + LR L Sbjct: 1 MKSGMNARLVSSHLLSCVMRKRISLTCLLDLEYGDSAFRLLSQRDQILVRAIVNVTLRFL 60 Query: 56 SQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIK-RPQL 114 ++D +++ ++ + K+ ++ L+ V + Q+LY + +A + VE A K Sbjct: 61 PRIDAVLDFVLISSLPRKKYSLQQLLRVSVAQILYLDVADYAVVDLAVEQAKRDKENRHF 120 Query: 115 KGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP 173 L+N +LR+ R++ ELL P W +RL+ Y E+ +I +A Sbjct: 121 AKLVNSILRRVSREKIELLQRIAGISI---IPEWFKERLENFYGKERVLAISDACISPLY 177 Query: 174 MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQD 232 + L ++W L+ + +RL+ P + +LPGF +G VQD Sbjct: 178 IDL---TVKFDIETWAHKLNAVMLPT-------GGIRLKELPESIVSLPGFAEGVWWVQD 227 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 ASA + N +LDLCAAPGGKT + + A+V A+D+ ++RL ++ NL R Sbjct: 228 ASASIPVQLFGTLNNLSVLDLCAAPGGKTAQL--IVSGAKVTALDVSKRRLEKLRCNLDR 285 Query: 293 LGMKAT-VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 L + A + + D +C ++ FD +L+DAPCS+TG IRRHPD+ W R DI + A Sbjct: 286 LHLYAEDIIEMDA---FDYCPKKLFDAVLVDAPCSSTGTIRRHPDVLWTRDTDDIVKSAC 342 Query: 352 LQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA-DAELCETG-------- 402 Q ++L +K GG +V++ CS+ +++ ++ L+ + EL Sbjct: 343 FQRKLLLQGISFVKPGGIVVFSNCSLDKQDSEEVVQKVLRSSPIPVELVPLNSAYWKSID 402 Query: 403 ----TPEQPGKQNLPG--------AEEGDGFFYAKLIK 428 + + P + DGFF L + Sbjct: 403 MAMALSPEGWIRITPDMLEKIDGVSSGMDGFFAVALRR 440 >UniRef50_C7LUK3 Sun protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUK3_DESBD Length = 424 Score = 343 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 130/443 (29%), Positives = 190/443 (42%), Gaps = 36/443 (8%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQLDWL 61 + R +A + + ++ Q L + + V + DK L EL +G LR ++D+L Sbjct: 2 STPSARRLALDILRRTLDHKQDLQAAVDEVLNPVQAGPDKGLATELAYGYLRMRGRIDFL 61 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLING 120 +++L+ P+ + ++ V +Y+LL+ RIP +A L V + + NG Sbjct: 62 LSQLLKNPVQ-TSPIMKRILGVAMYELLFLSRIPDYATLDWAVTLVRERLDQTMGKVANG 120 Query: 121 V----------LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANN 169 V +R + Q + A Y P WL + +Y EQ Q+ ++A Sbjct: 121 VLRSLLRLGLSVRFEEYYQTKTAGHDQFLSAWYSCPQWLARMWLGSYGKEQTQAFLQATL 180 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 PP+ +RINRTH ++ L L T P +G T Sbjct: 181 SAPPLGVRINRTHAQAETLRENLQPLQQDS-----SNWGFAL-TQWPEFLQHAVAEGAAT 234 Query: 230 VQDASAQGCMTWLAPQNGE-HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYD 288 Q +AQ M L ++ +LD CA GGKT + E V A D++ RL ++ Sbjct: 235 RQSLAAQKIMDALGVEHWPSPVLDACAGRGGKTYLMSEQGKN--VWASDVNVFRLRQLKA 292 Query: 289 NLKRLG--MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDI 346 RLG + A QG G YP + F LD PCS GV+ R PDIKW R D Sbjct: 293 EGARLGFDIPAFRSQGQGPYPLRQTPRTIF----LDVPCSGLGVLSRRPDIKWKRTAADC 348 Query: 347 PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ 406 L +LQ EIL A L +GG LVY TC++ PEEN QI F + Sbjct: 349 AGLVKLQEEILRAAADLLTSGGCLVYVTCTLNPEENEKQIDRFASLHPEFSRLRQA---- 404 Query: 407 PGKQNLPGAEEGDGFFYAKLIKK 429 Q+ P G+ F+ A L KK Sbjct: 405 ---QSGPAEGLGEFFYGAVLRKK 424 >UniRef50_C0W1K3 16S rRNA m(5)C 967 methyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1K3_9ACTO Length = 487 Score = 343 bits (881), Expect = 7e-93, Method: Composition-based stats. Identities = 115/461 (24%), Positives = 197/461 (42%), Gaps = 44/461 (9%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPL--QQKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R++A + + +V + + +LP + + +D + EL +G LR L+++DW+I + Sbjct: 30 ARTVAFETLLKVDVEDAYANIVLPKAITEANLDSRDASFATELVYGTLRNLARVDWVIEQ 89 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 M + + V ++ + +Q+L+ R+P HAA+AE+VE + ++ +NGV R Sbjct: 90 CMPKKIADLDPEVRAILRLTAHQILHLRVPDHAAVAESVELTKHVAGFGVEKFVNGVARA 149 Query: 125 F--------QRQQEELLAEFNASDARYLHPSWLLKRLQKAY------PEQWQSIVEANNQ 170 +R+ + + A Y HP W+++ +A P++ ++++A+N Sbjct: 150 MVEHTPGEWERRIKTIDANVTRVSVLYSHPEWIVRAFAQALQAHGRNPKELTALLKADND 209 Query: 171 RPPMWLRINRTHHSRDSWLALLDE-AGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVT 229 P + L + + P A +V + P L G Sbjct: 210 NPKVMLCARPGQILPVELADDAERYLDAEVAPGAYSEWSVAITHGDP-GKLAAVCHGAAA 268 Query: 230 VQDASAQGCMTWLA----PQNGEHILDLCAAPGGKTTHIL--EVAPEAQVVAVDIDEQRL 283 VQD +Q + LA + LD+CA PGGK + A ++A ++ R Sbjct: 269 VQDEGSQLVASALAELDLANDNGKWLDMCAGPGGKAGLVAAYAQLAGATLLANEVSAHRA 328 Query: 284 SRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 V + R V GDGR ++ + +F RI+LDAPCS G +RR P+ +W R+ Sbjct: 329 HLVEQTV-REFDNVEVIVGDGRKIAE---KGKFSRIILDAPCSGLGALRRRPESRWRRQP 384 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT---------- 393 D+ L +LQ+E+L+A L+ G L Y TCS E QI+ R Sbjct: 385 NDLNGLIKLQAELLEAGIDALEKDGVLAYITCSPHESETVKQIQRIAGRDDIKILDSKAA 444 Query: 394 ------ADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 ++ EL T Q P D F + K Sbjct: 445 VEKVSMSEIELSATPIGNGNSVQLWPHLHTTDAMFLCLIQK 485 >UniRef50_B4RCX9 rRNA methyltransferase RsmB n=8 Tax=Alphaproteobacteria RepID=B4RCX9_PHEZH Length = 598 Score = 343 bits (881), Expect = 8e-93, Method: Composition-based stats. Identities = 134/388 (34%), Positives = 186/388 (47%), Gaps = 34/388 (8%) Query: 54 TLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ 113 L +D + + +P + ++ +G QLL + P HAA++ TV+ A + K Q Sbjct: 231 HLGPIDAALQARLRKPPPD---RIVQVLRLGAAQLLVLKTPAHAAVSATVDLAASQKGGQ 287 Query: 114 L-KGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRP 172 KGL+N VLR R+ +L L P WL R + A+ + + A Sbjct: 288 AFKGLVNAVLRGLSREPPDLSDPD------LLAPQWLAARWRAAFGPEAARAMAAMVADE 341 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQD 232 P + ++ +L+ + G +VR V A PGF +G VQD Sbjct: 342 PATDVTPKDSADAEALGQMLEGRVLPG-------GSVRAGLKGEVQAWPGFAEGRWWVQD 394 Query: 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR 292 ASA LA + E LDLCAAPGGKT + A+V AVD RL RV +NL R Sbjct: 395 ASAAIPARLLAVKADETALDLCAAPGGKTLQLAAAG--ARVTAVDKAAGRLKRVSENLAR 452 Query: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 G+ A V Q D +W ++FD +LLDAPCSATG RRHPD+ W+ DIP+LA L Sbjct: 453 TGLSAEVVQADAA---EWPDRRRFDAVLLDAPCSATGTYRRHPDVLWVASPADIPKLATL 509 Query: 353 QSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG---- 408 Q+ +LDA +K GG LVY CS+ PEE Q++AFL+R+ + E Sbjct: 510 QARLLDAAARRVKAGGRLVYCVCSLEPEEGEAQVEAFLKRSPEFAPEPVEPGEGGAPEAS 569 Query: 409 ------KQNLPG--AEEGDGFFYAKLIK 428 + LP DGFF A+L + Sbjct: 570 RLPNGTLRILPHHLDGGTDGFFIARLRR 597 >UniRef50_C1TRU2 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRU2_9BACT Length = 479 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 113/437 (25%), Positives = 190/437 (43%), Gaps = 25/437 (5%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 A + +V +G+ S L + +VS+KD+ L L + ++R S ++ + + Sbjct: 45 EAALEVWREV-RRGRFASESLRAISDRVSEKDRPLAATLVYSLIRRESLWKEIVGRFLKT 103 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIP-PHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 +G V +MVG L R P + VE + + ++N VLR+ Sbjct: 104 GSSGVSPAVRDALMVGAAGSLELRTFEPRVLVNALVEWTK-CRDERGSRVVNAVLRRIVE 162 Query: 128 QQEELLAEFNA------SDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINR 180 E+LAE R P W K + ++ + ++++E ++Q + LR++ Sbjct: 163 GGPEILAEIERSVAFSDLAMRSGVPLWAAKSWESSFGRIEGRALIELHSQPVSLALRVST 222 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 R + L+E G+ D P ++RLE A LPG+++G +T Q S+ Sbjct: 223 G-VDRSEMVQRLEEGGVPAVESPDLPFSIRLEGTALPTILPGYDEGKITPQSESSMLVPL 281 Query: 241 WL-APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KA 297 +LD+CA GGKT + + PEA + D+ R+ ++RLG+ + Sbjct: 282 AFTGRGKFSRLLDMCAGRGGKTGQLAQAFPEACLEGWDLSGPRIKAALKEMERLGISDRV 341 Query: 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 + GD D +LLDAPCS +G RRHP+ KW ++ +Q+++L Sbjct: 342 KLSVGDSMELDPSFLP---DGVLLDAPCSGSGTWRRHPESKWRLSQDELARYGAMQAKLL 398 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA-------ELCETGTPEQP-GK 409 + TGGT++Y TCS+ EEN + + +D EL +P G Sbjct: 399 GRALDLVSTGGTVLYCTCSLFREENEQVVAKVMSGRSDVVELEPPHELVSRCRKGRPWGY 458 Query: 410 QNLPGAEEGDGFFYAKL 426 P DGF+ A L Sbjct: 459 YTWPDNPWTDGFYMALL 475 >UniRef50_C6X123 Ribosomal RNA small subunit methyltransferase B n=2 Tax=Flavobacteriaceae RepID=C6X123_FLAB3 Length = 401 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 104/423 (24%), Positives = 186/423 (43%), Gaps = 42/423 (9%) Query: 13 QAVEQVV-EQGQSLSNILPPLQ---QKVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 A+++ E + ++ L +K +D+ ++ ++ + ++R +L++ + + + Sbjct: 14 DALQETFFEDRKYADKVIERLLKANRKWGSEDRKVVSQIFYDIIRWKKRLEYYMGEGV-- 71 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING-VLRQFQR 127 ++ Y L +T+ K + G+ N +L + ++ Sbjct: 72 ---KPNNIYKLIL---TYCL-WTKTH-------------YKKFEEFDGIKNAEILNKLKK 111 Query: 128 QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 + P WL + ++K W+ + A N++ P LR N + Sbjct: 112 NT------VPTKSIEHSIPEWLAETMEKELGPTWEREMNALNEQAPTILRANTLKTTTKE 165 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 ++ L + ++ +YPDAV+L V F+DG VQDAS+Q L Q G Sbjct: 166 LISDLKDENVESSTIRNYPDAVQLVEKKNVFLTSAFKDGLFEVQDASSQKIGELLDVQEG 225 Query: 248 EHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 ++D CA GGKT H+ + + Q++A+DI +L+ + KR G + Sbjct: 226 MRVIDACAGAGGKTLHLAALMINKGQIIALDIYAWKLAELKRRAKRAGAHNIEARLIDDN 285 Query: 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 DR+L+DAPCS GV++R+PD KW I + + Q +IL LK Sbjct: 286 KVIKRLHGTADRVLIDAPCSGLGVLKRNPDSKWKIDQDFIDRIKKEQQQILQDYSKMLKK 345 Query: 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 GG +VYATCS+LP ENS Q+ FL+ + L + +P ++ DGF+ A + Sbjct: 346 GGKMVYATCSILPSENSEQVGIFLKNNEEFTLIREE-------KVMP-SDGFDGFYMALI 397 Query: 427 IKK 429 + Sbjct: 398 GRN 400 >UniRef50_C2KVE0 Possible rRNA (Cytosine-5-)-methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KVE0_9FIRM Length = 449 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 115/427 (26%), Positives = 183/427 (42%), Gaps = 49/427 (11%) Query: 17 QVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGK 73 +V +G+ + L L + +++KA L G+L QLD++I+ + + Sbjct: 55 KVFYEGEFIHLALRKLFSDYPGLGNREKAFLTRSSHGILERYLQLDYVISLYSSVKLKKL 114 Query: 74 QRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL 132 + V + + +YQLL+ +IP HA + E V+ K L +N VLR+ ++EE+ Sbjct: 115 KPVVLLSLRIAIYQLLFMDKIPEHAIVDEAVKSIKKRKLQGLVPFVNAVLRKIVGEKEEI 174 Query: 133 LAEF----NASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDS 187 + P +L+ K Y E+ ++ EA Q Sbjct: 175 KKKLASLPKEDAVSLCLPPDILEVFLKDYGRERTIAMAEAFLQ------------SDGGF 222 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 ++ G + + F G VT+QD S+Q L + G Sbjct: 223 YIRNESGEGERV--------------SGNILEEERFRSGAVTIQDFSSQAVGKSLKLKEG 268 Query: 248 EHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKA-TVKQGDGR 305 +LD C+APGGK HI + +V A D + +L + +N KRLG++ ++ D R Sbjct: 269 ALVLDCCSAPGGKACHIASLLKGSGKVYARDAQKDKLRYIVENQKRLGLENMEIEHWDAR 328 Query: 306 YPSQWC---GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 + GE D +L DAPCS GVI R PDI+ + EL LQ EIL + Sbjct: 329 VLDERFIQEGEGILDAVLCDAPCSGLGVIGRKPDIRLHFTKEALEELQSLQREILSTVQA 388 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFF 422 ++K GG L+Y+TCS+ +EN LQ L + + +PG DGF+ Sbjct: 389 YVKKGGQLLYSTCSLSFKENEENRDYILQNFP-FTLIKEE-------KFMPGKP-SDGFY 439 Query: 423 YAKLIKK 429 A +K Sbjct: 440 LALFQRK 446 >UniRef50_UPI0001C31BDA sun protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDA Length = 444 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 129/443 (29%), Positives = 197/443 (44%), Gaps = 29/443 (6%) Query: 5 RNLRSMAAQAVEQVVEQGQSLSNILPPLQQK--VSDKDKALLQELCFGVLRTLSQLDWLI 62 R +AA + +V G L ++ + +D A L FG ++ LD +I Sbjct: 9 SPARQVAAAVLRRVESDGAYADRALAGEARRAGLDARDHAFAMALAFGAVQRRRTLDHVI 68 Query: 63 NKLMARPMTGKQRTVHYLIMVGLYQLLYTR-IPPHAALAETVEGAIAIKRPQLKGLINGV 121 +L RP+ V + +GL QLL+ + PHAA+ ++VE A A P L+N V Sbjct: 69 ERLARRPVGQLDPPVRDALRLGLLQLLFLGGVAPHAAVDQSVELAKAAGGPGY-KLVNAV 127 Query: 122 LRQFQRQQEELLAEFNASDAR-----YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 LR+ R+ +LA+ + + P W+ A E+ ++++ N+ Sbjct: 128 LRRGAREGPRILAQLDDRSPHGAALLHSVPDWIAALWWDALGAEEARALLARVNEPAETA 187 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHAD----YPDAVRLETPAPVHALPGFEDGWVTVQ 231 LR+N + A L E G+ P A + + +++ V + P F G + Q Sbjct: 188 LRVNTLAADPAAVAAELGERGVAVRPAALEGIPLDEGLVVDSAFDVRSDPLFASGALVAQ 247 Query: 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVD----IDEQRLSRVY 287 +A LAP G +LDLCAAPGGK TH+ + A E R + Sbjct: 248 SRAAMAAARLLAPAPGARVLDLCAAPGGKATHLAALVGAAGAAGEVVAVERHEGRAEALR 307 Query: 288 DNLKRL--GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 + +RL G V+ GD P FD +L+D PCS G ++ PD++W Sbjct: 308 ETCERLRAGGIVRVETGDAAQPRD--PGDHFDAVLVDPPCSGLGTLQGRPDLRWRASAEA 365 Query: 346 IPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE 405 I EL++LQ IL A L+ GG L+YATC++ P EN + AFL E T Sbjct: 366 IGELSRLQGRILAAGAAALRPGGALLYATCTISPRENEQVVDAFLAAHDGFERVST---- 421 Query: 406 QPGKQNLPGAEEGDGFFYAKLIK 428 +Q P ++ DGFF A L + Sbjct: 422 ---RQLTPSRDDTDGFFLALLRR 441 >UniRef50_Q0F395 Sun protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F395_9PROT Length = 404 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 129/422 (30%), Positives = 199/422 (47%), Gaps = 29/422 (6%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLM 66 +R A +++ ++ + + + ++ + + LL EL +GVLR L+ ++ Sbjct: 3 VRKAAIESLADILVRQRKAEQAMERYGVRLDARGRGLLHELVYGVLRRFYSLEADYSRFC 62 Query: 67 ARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 + T +++G YQL Y R+P HAAL+ETV A+ P+ G +N VLR+ Sbjct: 63 R---SKPDDTARMALLIGTYQLRYMRVPAHAALSETV-AAVMQSNPKAGGFVNAVLRRVS 118 Query: 127 RQQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSR 185 + + + R P W+ + A+ EQ + EA P + L R Sbjct: 119 EHEP---PQKLKPNQRAELPRWIYAGWRDAFGAEQVTACSEALKTVPQLSL---ALFTDR 172 Query: 186 DSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP- 244 D WL + G+ P AV L V LPG+E+G TV D +AQ + L P Sbjct: 173 DKWLEQVTGMGIDAVAGELTPCAVLLPAGTDVTTLPGYEEGAFTVIDQAAQAAVMALEPV 232 Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGD 303 ILD+CAAPGGKT + PEA ++A++++ +R+ R+ +NL+RLG V Q D Sbjct: 233 CRNGVILDICAAPGGKTAMLSHRFPEATILAIELNARRIPRLNENLQRLGCSNVQVIQAD 292 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 G D +LLDAPCSA+G++RRHPD K+L ++ + LA LQ +L Sbjct: 293 GLNLP--LPSLSVDALLLDAPCSASGILRRHPDAKFLHDEQAVETLAALQRRLLSESLRV 350 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFY 423 LK +VYA CS+ P+EN + ++ P DGFF+ Sbjct: 351 LKPDAAMVYAVCSIHPQENEQVLAE-------------SGALWDMQRRFPDIA-CDGFFH 396 Query: 424 AK 425 A Sbjct: 397 AV 398 >UniRef50_A6GKY6 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GKY6_9BURK Length = 455 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 148/430 (34%), Positives = 225/430 (52%), Gaps = 19/430 (4%) Query: 14 AVEQVVEQGQSLSNILPPLQQKVS-DKDKALLQELCFGVLRTLSQLDWLINKLMARPMTG 72 + +V+ +G+SL L + V + +Q+L + +R L + ++ +L++ Sbjct: 26 VMTRVLREGRSLDQALAAETKGVKTPQALGAIQDLAYFGMRNLGR-GQVLTRLISGKTLL 84 Query: 73 KQRTVHYLIMVGLYQLLYTR---IPPHAALAETVEGA-IAIKRPQLKGLINGVLRQFQRQ 128 ++ L+ +G L + P H + + V + + + KGL N LR F R Sbjct: 85 NPEPLNELMALGFGLLWDDKNPKYPAHTVVDQMVYACTGSEQFARAKGLANACLRNFLRD 144 Query: 129 QEELLAEFNASD-ARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDS 187 + A++ P+W +++L+ ++P+ W++++ PP+ +R+N S + Sbjct: 145 SNTWRNKAMEDPLAQHNLPAWWIEKLKASHPQHWETMLAQAQSHPPLVVRVNTRSSSASA 204 Query: 188 WLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNG 247 + L+ AGM+ + AV L P PV ALPGF+ G V+VQD++AQ L PQNG Sbjct: 205 YAEQLNAAGMQASVIGE--QAVLLAKPVPVSALPGFDLGQVSVQDSAAQLASQLLNPQNG 262 Query: 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL------GMKATVKQ 301 + ILD CAAPGGKT H+LE+A + ++VA+D QRL RV DN++R+ +K Sbjct: 263 QRILDACAAPGGKTGHLLELA-DIELVALDSSPQRLGRVEDNIRRIAPTLNGQWDLRLKV 321 Query: 302 GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 W FD IL D PC+ +GV+RRHPDI WLRR DI +L+Q+Q +IL+A+W Sbjct: 322 AQAELLDTWWDGVPFDGILADVPCTGSGVVRRHPDIPWLRRPDDIAKLSQIQHKILNALW 381 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAE---EG 418 LK GGTL+ TCS+ PEE L KAFL +DA P P Sbjct: 382 STLKPGGTLLLVTCSIFPEEGPLLAKAFLDNHSDALAQNAPGWVLPVAPANPDQGFDASP 441 Query: 419 DGFFYAKLIK 428 DGFFYAK K Sbjct: 442 DGFFYAKFEK 451 >UniRef50_A9LZZ8 SUN-family protein n=29 Tax=Betaproteobacteria RepID=A9LZZ8_NEIM0 Length = 419 Score = 340 bits (874), Expect = 5e-92, Method: Composition-based stats. Identities = 112/442 (25%), Positives = 185/442 (41%), Gaps = 57/442 (12%) Query: 12 AQAVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLINKLMAR 68 A+ + +++ Q +L + K+ +D+ + E F LR + I+ + R Sbjct: 11 AKVLAEMLTFKQPADAVLSAYFREHKKLGRQDRHEIAETAFAALRHYQK----ISTALRR 66 Query: 69 PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQ 128 P ++ +++G + Q+K L + Sbjct: 67 PHAQPRKAALAALVLG----------------------RSTNISQIKDL-------LDEE 97 Query: 129 QEELLAEFNASDARYL--------HPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRIN 179 + E L A + P WL+++LQ+ + E+ + + NQ P+ +R+N Sbjct: 98 ETEFLGNLKARKTEFSDGLNTAAELPQWLVEQLQQHWNEEEILAFGRSINQAAPLDIRVN 157 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 RD L LL P +RL+ ++ F DG + VQD +Q Sbjct: 158 TLKGKRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLA 217 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 + + GE I+D CA GGKT I ++A + ++ A DI E+RL+ + + R G+ Sbjct: 218 LLVGAKRGEIIVDFCAGAGGKTLAIGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI 277 Query: 299 VKQGDGRYPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 + + DR+L+DAPCS G +RR+PD+K+ + + L + Q I Sbjct: 278 HPERISSEHDTRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQHSI 337 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELC---------ETGTPEQP 407 LDA +K G LVYATCSVLPEEN LQ++ FL + E + Sbjct: 338 LDAASKLVKPQGRLVYATCSVLPEENELQVERFLSEHPEFEPVNCAELLQSLKVDLDTGK 397 Query: 408 GKQNLPGAEEGDGFFYAKLIKK 429 + + DGFF A L +K Sbjct: 398 YLRLDSARHQTDGFFAAVLQRK 419 >UniRef50_C5DAS2 RNA methylase, NOL1/NOP2/sun family n=7 Tax=Firmicutes RepID=C5DAS2_GEOSW Length = 454 Score = 340 bits (872), Expect = 8e-92, Method: Composition-based stats. Identities = 80/302 (26%), Positives = 129/302 (42%), Gaps = 21/302 (6%) Query: 145 HPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD 204 PS ++++++ ++ ++ LR N R+++ L P Sbjct: 3 LPSEFIEKMERLLEDEASRFFSTYHEEKANGLRFNPLKIDRETF---LTLVPFALSPVPF 59 Query: 205 YPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI 264 P + P G +Q+ SA L P GE +LDLCAAPGGKTT + Sbjct: 60 CPTGFYYDAHEQPGKHPYHAAGLYYIQEPSAMFVAEVLKPNPGEFVLDLCAAPGGKTTQL 119 Query: 265 LEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 + + ++A +I +R+ + +N++R G+ + + FD+IL+DA Sbjct: 120 AAMMKNQGLIIANEIHPKRVKALSENIERFGITNALVTNETPEKLAKYFPGFFDKILVDA 179 Query: 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 PCS G+ R+ + + + A Q ILD + LK GG LVY+TC+ PEEN Sbjct: 180 PCSGEGMFRKDEEAVQFWSQAHVEQCAIKQRHILDCAYEMLKEGGILVYSTCTFSPEENE 239 Query: 384 LQIKAFLQRTADAELCETG-----------------TPEQPGKQNLPGAEEGDGFFYAKL 426 I+AFLQ D EL + + P + +G+G F AK+ Sbjct: 240 QTIEAFLQTYDDLELLSIEKVHGIQPGRREWTNTNFEEMERTARLWPHSLKGEGHFVAKI 299 Query: 427 IK 428 K Sbjct: 300 KK 301 >UniRef50_C6QJ47 Sun protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QJ47_9RHIZ Length = 468 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 136/444 (30%), Positives = 207/444 (46%), Gaps = 39/444 (8%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLDWLINK 64 R +A A+ V+ + + ++ + ++ +D+A + + VLR L ++ Sbjct: 39 ARDVAVSALFSVLVEKRPFDDVFAKAAAARNLAPRDRAFARLIATTVLRNRGSLQAVLRT 98 Query: 65 LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIA-IKRPQLKGLINGVLR 123 + +P+ + +++ QLL + PPHAA++ V+ A + L+N VLR Sbjct: 99 YLEKPLPEHLGRLEQILLAAAAQLLLIKTPPHAAISLAVDQCRADRVGKRFGNLVNAVLR 158 Query: 124 QFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINRTH 182 + LA + P WL+ R + Y + + I A+ P + + Sbjct: 159 RLSESGSGRLASLDN--VMLTFPDWLMARWSRTYGAAEARQIARASLSEPSLDI---TVK 213 Query: 183 HSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 D+W + L+ A ++R V L G+ DG VQDA+A + L Sbjct: 214 SDADAWASRLNG-------VALPTGSIRCSHVGRVEELDGYNDGAWWVQDAAAALPVKLL 266 Query: 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 +G LDLCAAPGGKT + A+VVAVD RL+R+ +NL+RLG+ A + Sbjct: 267 GDVSGLSALDLCAAPGGKTAQLAA--GGARVVAVDKSAGRLARLQENLQRLGLSAEISVA 324 Query: 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWP 362 D + S E FD +LLDAPC+ATG IRRHPDI +L+R D+ LA LQ+++L Sbjct: 325 DAQSFSS---ETAFDVVLLDAPCTATGTIRRHPDILYLKRPEDVAALAALQAKLLRQAAG 381 Query: 363 HLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPE----------QPGKQNL 412 +K+GGTL+Y TCS+ PEE QI AFL D E + L Sbjct: 382 LVKSGGTLLYCTCSLEPEEGEEQIAAFLSEHRDFRRRPIALDETVIPLLWRTADGDLRTL 441 Query: 413 P--------GAEEGDGFFYAKLIK 428 P G DGF+ A L+K Sbjct: 442 PSYFSELPEGFRGLDGFYAAMLVK 465 >UniRef50_D2RGI9 Fmu (Sun) domain protein n=2 Tax=Archaeoglobaceae RepID=D2RGI9_ARCPR Length = 443 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 99/444 (22%), Positives = 187/444 (42%), Gaps = 31/444 (6%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKAL---LQELCFGVLRTLSQLDWLINKL 65 + A+ ++ + E S + D A+ + F + + L+ +D+++ Sbjct: 6 ELVAEVLKVIEETKLSEKEAIKRCLSG-KISDHAIWSSVHAYVFEIEKRLNLIDFILRNC 64 Query: 66 MARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQF 125 R + L+ VG+Y++ + + P A V ++ L N VLR+ Sbjct: 65 F-REFDKQNTVFKNLLRVGVYEMHFKGVHPALATDSIVRIVKQRFNLKMASLANAVLRRA 123 Query: 126 Q----RQQEELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINR 180 + ++ L + Y HP W ++ E + +++ANN++ +++R+N Sbjct: 124 EKFDYERRFRKLGKVKRLALEYWHPEWFVRYAIDMLGEDEAIKLMKANNEKQSVYVRVNE 183 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT 240 + + L+ +G++ ++ L +G VQD ++ Sbjct: 184 LKANIEEVRRYLENSGVEIEETPLPEVFKAVKYEKHPSVLDWHSEGKYVVQDLASCFVSH 243 Query: 241 WLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 L PQ E ILDL +APG K +HI + + ++AVD +RL R+ +K+LG+K V Sbjct: 244 VLDPQPDEIILDLASAPGLKASHIASMMENKGVIIAVDNSAERLERMKAKMKQLGVKNVV 303 Query: 300 KQ-GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 + DG D++L+D PCS+TG R +P +KW + +Q +++ Sbjct: 304 CRLADGC----KIKVGDVDKVLVDPPCSSTGSFRSYPCVKWRFDRELYLKTIDVQRKMIK 359 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQP----------- 407 + +LK+GG +VY+TCS+ +EN + F E + + Sbjct: 360 NAFRNLKSGGIMVYSTCSITFDENEENV-MFASEFFKVEEVKPVIGVRGIREFRGKVFPF 418 Query: 408 ---GKQNLPGAEEGDGFFYAKLIK 428 + P + GFF +KL K Sbjct: 419 WDKVVRTFPHLHDCTGFFISKLKK 442 >UniRef50_Q2RN41 tRNA and rRNA cytosine-C5-methylase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RN41_RHORT Length = 438 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 205/435 (47%), Gaps = 32/435 (7%) Query: 12 AQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMT 71 + V++ G+ L ++ +K+ +D+A + L LR + +L+ +I + RP+ Sbjct: 13 LDLLSAVLDHGRPLDDVFDAATRKLEPRDRAFARLLAATTLRRMGRLEKVIKTFLDRPLP 72 Query: 72 GKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEE 131 + +++ +G Q+L+ PPHAA+A +V+ A + GLIN VLR+ Sbjct: 73 RRAVGAKHILRLGAAQMLFLDTPPHAAVATSVDVARVRRLAPYAGLINAVLRKVADHGAA 132 Query: 132 LLAEFNASDARYLHPSWLLKRLQKAYPEQWQS-IVEANNQRPPMWLRINRTHHSRDSWLA 190 LA F D P WL + AY + + + EA + P+ L + Sbjct: 133 RLAGF--DDPLADLPRWLGQSWIAAYGAETAARLAEACGREAPLDLT--PRDGDGGALAE 188 Query: 191 LLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA-PQNGEH 249 L+ + G +VRL T V L GF +G VQDA+A + P G Sbjct: 189 LVGGLALPG-------GSVRLPTATAVRELAGFTEGQWWVQDAAAALPVLLAGVPLKGAR 241 Query: 250 ILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR--LGMKATVKQGDGRYP 307 ++D CAAPGGKT + AQV AVD RL+R+ +NL+R LG V +GD Sbjct: 242 VVDFCAAPGGKTLQLAAAG--AQVWAVDRSATRLARLRENLERTGLGDAVNVVEGDALTF 299 Query: 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 + QQ D +L+DAPC+ATG RRHPD WL+R D LA LQ +LDA ++ G Sbjct: 300 T-LTDGQQADVVLVDAPCTATGTFRRHPDAPWLKRPGDAAALAALQDSLLDAAVRLVRPG 358 Query: 368 GTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG----------KQNLPGA-- 415 G +VY CS+ PEE + +I+A L R+ + E + P Sbjct: 359 GVIVYCVCSLQPEEAAPRIEALLARSPEISRKPITAGEGGVSDEMITAEGDVRLFPFHLD 418 Query: 416 --EEGDGFFYAKLIK 428 DGFF A+L++ Sbjct: 419 AVGGLDGFFIARLVR 433 >UniRef50_C7JI41 tRNA/rRNA cytosine-C5-methylase Nol1/Nop2/Sun n=10 Tax=Acetobacteraceae RepID=C7JI41_ACEP3 Length = 437 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 111/424 (26%), Positives = 176/424 (41%), Gaps = 35/424 (8%) Query: 22 GQSLSNILPPLQQK---VSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVH 78 + + ++ + D+ + L + V+R +L W + + K + Sbjct: 22 RKPADAVANSFFRERRYMGGGDRRAISGLVWDVMRAWRRLGWWLEQ--------KGQVAS 73 Query: 79 YLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING---VLRQFQRQQEELLAE 135 + G +LL+ +LAE VE R L G +L + L Sbjct: 74 ARLRAGA-RLLFDGF----SLAE-VEEMFEQGRFAAGALTRGELSILTPLA--GKTLDNP 125 Query: 136 FNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEA 195 R P WLL L + ++ + + A + P+ LR+N R L Sbjct: 126 EMPRAVRLELPDWLLPHLDATFGDKLEDELAAMSAPAPLDLRVNILRGPRKEAQRSLACE 185 Query: 196 GMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCA 255 G+ P P +RL PV F DG V +QD +Q + +LD CA Sbjct: 186 GLHAEPTPLSPWGLRLPARLPVTTSVAFRDGLVEIQDEGSQLVAAISGVEPQMRVLDYCA 245 Query: 256 APGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGE- 313 GGKT + + + +VA D+ RL L+R G+ + P + Sbjct: 246 GAGGKTLAMAMMMENKGHIVACDVSAPRLEGAVKRLRRAGVHNVERH--LLVPGDKWAKR 303 Query: 314 --QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLV 371 FDR+L+DAPCS TG RR+PD ++ ++D+ EL + Q+ I+D ++ GG +V Sbjct: 304 RAGSFDRVLVDAPCSGTGTWRRNPDARFRTTEQDLTELLEKQAAIMDRAAALVRAGGRMV 363 Query: 372 YATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG-------KQNLPGAEEGDGFFYA 424 YATCS+L EN Q+ AFL R D +L + +P+ P P + DGFF A Sbjct: 364 YATCSLLRAENMDQVAAFLARHPDFKLVPSDSPDMPEALRKESSISLTPLRDGTDGFFAA 423 Query: 425 KLIK 428 + + Sbjct: 424 VMER 427 >UniRef50_UPI0000ECD55E Putative RNA methyltransferase NOL1 (EC 2.1.1.-) (Proliferating-cell nucleolar antigen p120) (Proliferation-associated nucleolar protein p120). n=1 Tax=Gallus gallus RepID=UPI0000ECD55E Length = 722 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 159/336 (47%), Gaps = 30/336 (8%) Query: 120 GVLRQFQRQQEELLAEFNAS-DARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLR 177 GV R+ R ++E LA A Y + +LLK L +P + + +EAN P+ +R Sbjct: 295 GVKREEGRTRQEYLALLRRDMAAYYSYSDFLLKMLMDIFPLPELINFLEANEVPRPVTIR 354 Query: 178 INRTHHSRDSWLALLDEAGMKGFPHA-DYPDAVRL-ETPAPVHALPGFEDGWVTVQDASA 235 N R L G+ P + + ++ P+ A P + G +Q AS+ Sbjct: 355 TNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSSVPIGATPEYLAGHYMLQGASS 414 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG 294 + LAPQ E ILD+C APGGKT++I ++ ++A D + +RL V NL RLG Sbjct: 415 LLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSNAERLRSVVGNLHRLG 474 Query: 295 MKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 + V DGR + G FDR+LLDAPCS TGVI + P IK + ++DI A LQ Sbjct: 475 VTNAVVSNCDGRQFPKVLGG--FDRVLLDAPCSGTGVISKDPAIKTNKDEKDILRCAHLQ 532 Query: 354 SEILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG- 408 E+L + + +TGG +VY TCS+ EEN + L++ + L TG Sbjct: 533 KELLLSAIDSVNATSETGGYIVYCTCSITVEENEWVVDYALKKR-NVRLVATGLDFGKEG 591 Query: 409 ----------------KQNLPGAEEGDGFFYAKLIK 428 ++ P DGFF AKL K Sbjct: 592 FTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKLKK 627 >UniRef50_Q8TGZ4 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TGZ4_METKA Length = 452 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 106/447 (23%), Positives = 195/447 (43%), Gaps = 30/447 (6%) Query: 9 SMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKAL---LQELCFGVLRTLSQLDWLINKL 65 + A+ + E +SL + + +D + + CF +++ L +D + Sbjct: 8 ELTARVFVEWEETRRSLRECVKKVLLNEGVRDHRVWGTIHAYCFELMKRLRTVDAFLEAT 67 Query: 66 MAR-PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 + + V + VG +++ + + P A E V+ + +N VL Sbjct: 68 IRNAKLFDLDPWVRNALRVGTFEMKFNDVKPAIATNEAVKIVVECVGEGPARFVNAVLYD 127 Query: 125 FQRQQ-----EELLAEFNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRI 178 +R + Y HP W +K L E + +++ANN+ P +LR+ Sbjct: 128 VERLELSDVLNRAKDTVERLAIEYSHPEWFVKHLMDLLGENELTKLMDANNREPERYLRV 187 Query: 179 NRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL-ETPAPVHALPGFEDGWVTVQDASAQG 237 + D + L++ G+ D P +R+ + P + GWV QD ++ Sbjct: 188 HAHMVDPDKAILALEDDGVAVEEDPDLPFMLRVVDHDVPPVRTEPYRRGWVAYQDKASAA 247 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 L P+ G+ +LD CAAPGGK+ ++ + E ++ VD++ +RL + N +R G++ Sbjct: 248 AAYALRPEPGDRVLDACAAPGGKSAYLYALTEGEIELTCVDVNPRRLREMRRNFRRWGIE 307 Query: 297 ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 A +++ D + + FD L+D PCS++G R P+ KW + R + A+ Q I Sbjct: 308 ARLRRADSSRLYRETD-ETFDLALVDPPCSSSGAYVRAPEAKWTVKWRHVKRYARGQLSI 366 Query: 357 LDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK------- 409 L + P ++ TLVY+TCSV E+ ++ FL+ + E+ E PG Sbjct: 367 LRGVAPLVER--TLVYSTCSVTVVEDESVVRRFLREFDEFEVEEPFGFGSPGFDSWMNER 424 Query: 410 --------QNLPGAEEGDGFFYAKLIK 428 + P +GFF A+L++ Sbjct: 425 YPWADRVRRFWPHRHRTEGFFVARLVR 451 >UniRef50_A6GTQ3 NOL1/NOP2/sun family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTQ3_9BURK Length = 448 Score = 337 bits (866), Expect = 4e-91, Method: Composition-based stats. Identities = 105/437 (24%), Positives = 181/437 (41%), Gaps = 46/437 (10%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 AQ ++ + + + + ++ +D+ ++ E + LR +++ L Sbjct: 36 VAQLIDLLAQFEGPADAAISRFFKDHPELGGRDRPMVAEAVYCWLRYRYRINHLAQ--SG 93 Query: 68 RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 + ++ L+ G + ++ L +IN Sbjct: 94 EGPSVVRQAKLALLWSGAPEQIW-------------SAGKQADNEWLSRVIN-------- 132 Query: 128 QQEELLAEFNASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRD 186 + A+ +AR P W +L + + E+ +S +A P+ LR+N S Sbjct: 133 ----ISADDLGVEARTCLPEWFYTKLAEQFGQERAESFSQAVLSAAPLDLRVNTVKASTT 188 Query: 187 SWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQN 246 LA L G++ P P+ +R V F++G+ VQDA +Q +AP+ Sbjct: 189 DLLAALTNMGIQVNPIEGLPEGLRAVGKPIVGKTEVFQEGYFEVQDAGSQWVSRLVAPRR 248 Query: 247 GEHILDLCAAPGGKTTHI-LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA--TVKQGD 303 G+ ++D CA GGKT I ++ ++VA+D E+RL + R G+ T+ D Sbjct: 249 GDLVIDFCAGAGGKTLAIGAQMKNTGRIVALDTSEKRLVKFKPRAARSGLSNFYTMVIND 308 Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPH 363 P + DR++ D PCS G +RR+PD+K+ + + + EL Q I++ Sbjct: 309 EADPRLNKYFGKADRVVTDVPCSGMGTLRRNPDLKFRQNLQSLSELTAKQKSIIEHAAKL 368 Query: 364 LKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG------------KQN 411 +K G LVY TCSVL +EN + AFL+ + L PG + Sbjct: 369 VKPDGRLVYITCSVLRDENEDIVNAFLESHPEFRLRRWTEVLNPGERPVKANTTDDMLRL 428 Query: 412 LPGAEEGDGFFYAKLIK 428 P E DGFF A L + Sbjct: 429 WPEDGESDGFFAAVLQR 445 >UniRef50_C6BVK4 NusB/RsmB/TIM44 n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVK4_DESAD Length = 427 Score = 337 bits (866), Expect = 4e-91, Method: Composition-based stats. Identities = 110/446 (24%), Positives = 191/446 (42%), Gaps = 36/446 (8%) Query: 1 MKKQRN---LRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTL 55 MKK + R +A + V + ++ G +L K+ +D+ + E+ +G LR Sbjct: 1 MKKTNSLPGPRGVAYECVTRSLDGGADAQAVLDNALTAAKLDGRDRGFVTEILYGYLRMR 60 Query: 56 SQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLK 115 +L ++N ++RP + ++ + Y++L+ +P +A++ V+ A + R +L Sbjct: 61 LRLQSVLNCFLSRPDGLPAPILR-VLGMAAYEILHMDVPAYASVDWGVDSAKRLSRGKLG 119 Query: 116 GLINGVLRQFQRQQEELLAE----------FNASDARYLHPSWLLKRLQKAYP-EQWQSI 164 GL N VLR+ R E+ E A Y P W+++ +Y ++ + Sbjct: 120 GLANAVLRKVARLAEDGADEDFFRRNSDSEIEFLSAYYSCPEWIVELWVDSYGRDKAEQY 179 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFE 224 +EA P ++ + + L E A + A G + Sbjct: 180 LEAQICPPAAGFVLDTKSNEAKAAAEQLLEENDYIASDG---QAFAFYSGYWPQAFNGLK 236 Query: 225 DGWVTVQDASAQGCMTWLAPQNGEH-ILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRL 283 + VT Q +A+ ++ L P + D C+ GGK+ + + ++A D +RL Sbjct: 237 E-SVTRQSYAAREALSVLGPSEWPTPVWDGCSGRGGKSRFLHS-KNISPIIASDPHARRL 294 Query: 284 SRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 + + + +V + ++ LLD PCS GV+ R PD K+ R Sbjct: 295 AALKREV------PSVASFRASAINPPLAKESIGTALLDVPCSGLGVLSRRPDTKFKRTP 348 Query: 344 RDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGT 403 D+ L LQS ILD W ++ GG L Y TC++ P EN QI AFL+R DA + T Sbjct: 349 EDVDSLVHLQSRILDNTWETIRKGGRLAYITCTLNPAENEGQIGAFLKRHKDAVPLKEWT 408 Query: 404 PEQPGKQNLPGAEEGDGFFYAKLIKK 429 P +E + F+ A + KK Sbjct: 409 TP-------PDSELHEFFYSALIEKK 427 >UniRef50_Q16QI0 Ribosomal RNA small subunit methyltransferase b (Sun) n=2 Tax=Culicini RepID=Q16QI0_AEDAE Length = 812 Score = 337 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 100/344 (29%), Positives = 153/344 (44%), Gaps = 36/344 (10%) Query: 118 INGVL------RQFQRQQEELLAEF-NASDARYLHPSWLLKRLQKAY-PEQWQSIVEANN 169 + GVL R R + E + Y + + ++ L K + P + +EA+ Sbjct: 276 VIGVLADFSVNRDPNRSRSEYMELLCKDLCIYYSYNEFFMQLLLKLFSPNELLEFLEASE 335 Query: 170 QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHA-DYPDAVRL-ETPAPVHALPGFEDGW 227 + P+ +R N R L G+ P + + + + P+ A P + G Sbjct: 336 VQRPLTIRTNSLKTRRRDLAQALINRGVNLDPIGKWSKEGLVVYTSQVPLGATPEYLAGH 395 Query: 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRV 286 +Q AS+ + L P+ E ILDLCAAPGGK++HI + + A D+++ RL V Sbjct: 396 YMIQGASSMLPVIALGPEENERILDLCAAPGGKSSHIAALMKNTGVLFANDVNKDRLQAV 455 Query: 287 YDNLKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD 345 N RLG++ + DG FDR+LLDAPC+ +GVI + P +K + D D Sbjct: 456 VGNFHRLGIQNAIVTSIDGTKYRDVMTG--FDRVLLDAPCTGSGVISKDPSVKTTKTDVD 513 Query: 346 IPELAQLQSEILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET 401 I LQ ++L L +TGG LVY+TCS+LP+EN + L++ + L T Sbjct: 514 IQRCYNLQRKLLLTAIDCLSANSETGGYLVYSTCSILPQENEWVVDYALRKR-NVRLVST 572 Query: 402 GTPEQPG-----------------KQNLPGAEEGDGFFYAKLIK 428 G ++ P DGFF AKL K Sbjct: 573 GLDFGNEGFVNFAGQKYHPSMKLTRRFYPHTFNMDGFFVAKLQK 616 >UniRef50_C0VVY3 Possible rRNA SAM-dependent methyltransferase RmsB n=1 Tax=Corynebacterium glucuronolyticum ATCC 51867 RepID=C0VVY3_9CORY Length = 470 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 125/484 (25%), Positives = 184/484 (38%), Gaps = 88/484 (18%) Query: 18 VVEQGQSLSNILPP--LQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQR 75 + G + LP + +S +D A E+ +G +R + LD +I +RPM+ Sbjct: 1 MFNDGAYGNIALPREITEAGLSGRDAAFATEIGYGTMRMVGVLDEIIGSCSSRPMSELDP 60 Query: 76 TVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ-EELLA 134 V + +G+YQLLYTR+ HAA+ +V ++KG +N +LR Q++ E+ + Sbjct: 61 IVLNALRMGIYQLLYTRVEDHAAVDTSVRLV----PQRVKGFVNAILRAVQKKPLEQWIE 116 Query: 135 EFNA------SDARYLHPSWLLKRLQKAYP------------------------------ 158 E R HP W+ + Sbjct: 117 ELAPEGKLAQLAFRTGHPEWIARSYLATLSAPSGAVPSANGVGTESSADGARADSSAARS 176 Query: 159 -------------------EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKG 199 ++ +EA++ RP + L S D L G Sbjct: 177 DPSTDPSAEPSTGSSTILFDELAKALEADSTRPIVHLAAKPGEISADELA--LITGG--- 231 Query: 200 FPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWL---APQNGE-HILDLCA 255 A P AV LE P + ++ +QD +Q L N LDLCA Sbjct: 232 EEGAYSPYAVYLEGGNP-ADIEPVQEKLAFIQDEGSQLIGAALVRVDVDNDAGRWLDLCA 290 Query: 256 APGGKTTHILEVA--PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGE 313 PGGK T I +A A V AV+I R + + G+ TV GDGR Sbjct: 291 GPGGKATMIGSLAAIDGATVTAVEIAPHRGDLIRKATE--GLPVTVVVGDGRTVDV---G 345 Query: 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 373 FDR+L+DAPCS G +RR + +W + + DI EL LQ E+L+A K GG +VY+ Sbjct: 346 SSFDRVLVDAPCSGLGSLRRRQESRWTKDESDIEELTALQYELLEAGVSRCKPGGVVVYS 405 Query: 374 TCSVLPEENSLQIKAF--------LQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAK 425 TCS E + L + + Q D F+A Sbjct: 406 TCSPDLRETREIVDKALVTLPVEELDAHPLVAPMD-NVGREKSVQMWTYRHGTDSMFFAV 464 Query: 426 LIKK 429 L KK Sbjct: 465 LRKK 468 >UniRef50_Q8TH02 tRNA/rRNA cytosine-C5-methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TH02_METKA Length = 444 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 98/437 (22%), Positives = 190/437 (43%), Gaps = 22/437 (5%) Query: 12 AQAVEQVVEQGQSLSN----ILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 A+ + + G SL L S + +A+ + L + + L + +++ ++ Sbjct: 11 ARILAEHYRSGVSLKESFYRALDNPFSIPSHRARAIHRRL-MELGKRLGLCEEILDDVIQ 69 Query: 68 R-PMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQ 126 + +++ ++L+ P A + ++ ++ V + Sbjct: 70 SGSFEDLGPELKGVLVTAADEMLFEGTSPALVTDAATRVAKELVSDRVADFVHAVCFDLE 129 Query: 127 RQQEELLAE--FNASDARYLHPSWLLKRLQKAYPE-QWQSIVEANNQRPPMWLRINRTHH 183 + + L ++ R+ P + +++ PE + + + A N+ ++R+N Sbjct: 130 KYDVDRLKRRGYDDLCLRHYFPPDFVDYVRRVLPEDEIEDFLRACNKPAVKYVRVNTLRA 189 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRL-ETPAPVHALPGFEDGWVTVQDASAQGCMTWL 242 D L E G+ P PD +R+ E P+ +++G V QD ++ L Sbjct: 190 DVDEVRERLAEEGVLTEPDEHIPDLLRVVEEEIPIVRTEAWKEGLVFTQDKASAAVAHVL 249 Query: 243 APQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK---AT 298 PQ GE ++DLCAAPGGKT H L + E +++AVD + RL + + L + Sbjct: 250 DPQPGEFVVDLCAAPGGKTLHALCLMEGEGEILAVDKSDWRLDAMREKLAWQRVPDGVVE 309 Query: 299 VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILD 358 ++ D R + E+ DR ++D PCS G +++ P+ +W + + A+LQSE+L+ Sbjct: 310 LRCADAREIPEELDEE-ADRAIVDPPCSGMGSVQKRPETRWNVTKKRVRRYAKLQSELLE 368 Query: 359 AIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQ------PGKQNL 412 A ++ GG +VY+TC++ EN I+ +R D + + ++ Sbjct: 369 AAIKTVRPGGIVVYSTCTLTINENENVIRRVARRY-DVTIEKVNLQFGRRGLVPGTRRFY 427 Query: 413 PGAEEGDGFFYAKLIKK 429 P + GFF AKL K Sbjct: 428 PHTDRCQGFFIAKLRKN 444 >UniRef50_C0W3L2 rRNA (Cytosine-C(5)-)-methyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3L2_9ACTO Length = 527 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 120/467 (25%), Positives = 201/467 (43%), Gaps = 41/467 (8%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQ--QKVSDKDKALLQELCFGVLRTLSQLD 59 R ++ +A+ +V + G + +LPP+ ++ +D L +G LR + D Sbjct: 60 STVDAARLVSLEALTKVRQDGGFANLVLPPMLDAARLDRRDAGFATALTYGTLRLQGRYD 119 Query: 60 WLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLIN 119 +I + + R + V ++ +G +QLL R+ HAA++ TV+ A GL+N Sbjct: 120 AIIAQCVDRRLDQLDGVVLDVLRLGTHQLLGMRVATHAAVSATVDLASHAAGRGAAGLVN 179 Query: 120 GVLRQF---------QRQQEELLAEFNASDARYLHPSWLLKRLQKAYP------EQWQSI 164 VLR+ E+ E NA A + HP W++K L++A E+ +++ Sbjct: 180 AVLRRISQKDLEQWLAELTEQAADELNALSATHSHPVWVVKALRQALASNDRPQEELEAL 239 Query: 165 VEANNQRPPMWLRINRTHHSRDSWLALLDEAG-MKGFPHADYPDAVRLETPAPVHALPGF 223 +EA+N P + L S + + +EA P AV L P LP Sbjct: 240 LEADNADPEVVLCARPGLISPEHLVKEAEEATRGHAHVGDRSPYAVVLPGGDP-GRLPAV 298 Query: 224 EDGWVTVQDASAQGCMTWLAPQ----NGEHILDLCAAPGGKTTHILEVAPE--AQVVAVD 277 V+D +Q L+ E LDLCA PGGK + A + A++VA + Sbjct: 299 RSSAAGVEDEGSQLVALVLSEAAVEGRDERWLDLCAGPGGKAALLGARAAQRGARLVANE 358 Query: 278 IDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDI 337 + R V +++ + + D ++DR+L+DAPCS G +RR P+ Sbjct: 359 VTAHRAELVRASVRAVPEGVVEVRCDDGRLYGQAEPGRYDRVLVDAPCSGLGSLRRRPEA 418 Query: 338 KWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR----- 392 +W R+ D+ ELA+LQ E+L + ++ GG + Y TCS E L ++ ++R Sbjct: 419 RWRRQPTDVAELAELQRELLVSALAAVRVGGLVAYVTCSPHVLETELVVRDVIRRLEREG 478 Query: 393 ------TAD-----AELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 A ++P Q P + D F A L + Sbjct: 479 RGAEVLHAGDVATRVAPVPPAGADRPMLQLWPHLDGTDAMFCALLRR 525 >UniRef50_B3QS48 Fmu (Sun) domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS48_CHLT3 Length = 448 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 100/448 (22%), Positives = 187/448 (41%), Gaps = 41/448 (9%) Query: 11 AAQAVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 A + + + + +L + + D++ + E + +LR L+ ++ K Sbjct: 13 AYELLCS---EARPADAVLSEYLRARKYLGSHDRSFISETIYNLLRKELFLEAVVQKSAK 69 Query: 68 ---RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQ 124 RP + K V YL ++ I A + E A ++ P L + + Sbjct: 70 GSSRPKSFKNVGVLYLFLLS-----DMDIERRALVDVFGEMA-SLAEPYFDAL-DAAYQA 122 Query: 125 FQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIV-EANNQRPPMWLRINRTHH 183 F + + ++ P W+ + L K + E ++ E+ N+ P+ LR N Sbjct: 123 FTDTTKSKSTPILFLE-KHAFPEWMTEELLKEFDEPTLQLIYESLNKPAPLALRANSLKI 181 Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA 243 SR++ L++ + F DA+ + + ++DG +QD +Q L Sbjct: 182 SREALQKKLEKESIPTFLGKLSADALICKGRRRIIQSQCYQDGLCEIQDEGSQLISRLLD 241 Query: 244 PQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG 302 P+ + +LD CA GGKT H+ + + + A D++ +R + +KR G + ++ Sbjct: 242 PKPKDTVLDACAGGGGKTLHLAALMKNKGAIFAYDVNPKRFGNIRQRIKRSGQQN-IRLL 300 Query: 303 DGRYPSQWCGE---QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 D ++ D +L+DAPC+ +G +RR+PD+K + + Q+EIL+ Sbjct: 301 DSPEKLAQFKNDWHEKIDCLLIDAPCTGSGTVRRNPDLKKRLTKEALQRITAQQAEILEE 360 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG----------------- 402 LK G ++YATCS+ +EN QI++FL++ D L Sbjct: 361 FSVLLKPNGKMLYATCSLFRDENEGQIESFLEKHPDFRLEPISSILENERHAAHAALQNK 420 Query: 403 -TPEQPGKQNLPGAEEGDGFFYAKLIKK 429 + + P + DGFF A K+ Sbjct: 421 RFEGETYLKLRPDKDNTDGFFAAIFRKQ 448 >UniRef50_Q16CE2 RRNA methyltransferase RsmB n=15 Tax=Rhodobacterales RepID=Q16CE2_ROSDO Length = 423 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 143/443 (32%), Positives = 201/443 (45%), Gaps = 42/443 (9%) Query: 3 KQRNLRSMAAQAVEQVVEQGQSLSNILPP-LQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 R A ++Q++ +G+ +S +L K+ +D+A L LR L + D + Sbjct: 4 TGLPARRSAVYLLDQILGEGRLMSELLTAGTLDKLEPEDRARAARLAQDTLRGLERADRI 63 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGA-IAIKRPQLKGLING 120 + K +++ TV + VG +L T H + VE LKGL N Sbjct: 64 LQKHLSKYP---PLTVRNALRVGAVELC-TGTAAHGVVNAMVELVSRHKHYSHLKGLTNA 119 Query: 121 VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVE-ANNQRPPMWLRIN 179 VLR+ A P WL L +A+ + +E A+ P+ L Sbjct: 120 VLRKVAADGPAAWDALRAPR----LPKWLRGPLVEAWGADAMARMEIAHFAGAPLDL--- 172 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCM 239 + AL G P +VR+E V A+PGF DG VQDA+A + Sbjct: 173 TAKSDASAIAAL---TGGTVLPT----GSVRVENAGQVSAMPGFSDGTWWVQDAAAALPV 225 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV 299 LAPQ GE +LDLCAAPGGKT + A+V AVD R+ RV +NL R G+KA V Sbjct: 226 RILAPQPGETVLDLCAAPGGKTMQLAAAG--ARVTAVDDSSVRMGRVAENLARTGLKAEV 283 Query: 300 KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA 359 D R S FD +LLDAPCSATG IRRHPD+ + + +L +QSE++D Sbjct: 284 LVQDARATS-----GTFDAVLLDAPCSATGTIRRHPDLPHAKDGSEFGDLIAMQSELIDH 338 Query: 360 IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE----------LCETGTPEQPGK 409 W +K GG LV+ TCS+LP+E +Q+ L+R D + + G Sbjct: 339 AWDRVKPGGRLVFCTCSLLPDEGEVQVDEALERHEDMRTDADALGVPGVDPAWRTSEGGL 398 Query: 410 QNLP----GAEEGDGFFYAKLIK 428 + P DGF+ A L K Sbjct: 399 RLRPDYWSDLGGLDGFYIAVLRK 421 >UniRef50_O27960 Fmu and fmv protein n=1 Tax=Archaeoglobus fulgidus RepID=O27960_ARCFU Length = 437 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 106/446 (23%), Positives = 192/446 (43%), Gaps = 37/446 (8%) Query: 2 KKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWL 61 + +AA+ + +V S+ + + L K + + L+ L+ +D+ Sbjct: 8 SNVIPTQEIAAKVLAEVERSRISVKSAVQKLAGGFDYKVRGSVHAYSVETLKRLNAIDYF 67 Query: 62 INKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGV 121 + + + G L+ + +Y++ Y + P A V A + L+N V Sbjct: 68 LKSTLKK-FDGLDPFTRNLLRIAVYEMKYKGVHPALATDSAVRIARERGK---ASLVNAV 123 Query: 122 LRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINR 180 LR+ ++ + Y HP W +K + E +++AN + PP ++R+N Sbjct: 124 LRKVEKLDIQAEGRLKELSLTYFHPEWFVKYAIELLGEDGALKLMKANLRNPPTYVRVNE 183 Query: 181 THHSRDSWLALLDEAGMKGFPHADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCM 239 S +S L++ G+ + R++ +L +G +QD ++ Sbjct: 184 LKGSVESVREYLEKNGVILEET-FLDEVFRVKGYEKHPASLDWHSEGKYVIQDLASCFVS 242 Query: 240 TWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKAT 298 L P G+ ++DL AAPG KT H+ + E ++VAVD R+ R+ LK+LG+K Sbjct: 243 HALNPSPGDVVIDLAAAPGMKTAHMAMLMQNEGRIVAVDNSPSRVRRMRSKLKQLGVKNV 302 Query: 299 -VKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEIL 357 +K GDG E + D+ L+DAPCS+TG P++KW +R ++Q +++ Sbjct: 303 EIKLGDGC-----VFECEADKALVDAPCSSTGNYASQPNVKWTFDERKFRATMKVQRKMI 357 Query: 358 DAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPG--------- 408 L+ +VYATCS+ EEN L+ A++ +P G Sbjct: 358 ANA---LRNADEVVYATCSITFEENEEN---LLKT--GAKILPLPSPFGRGVREFRGVLF 409 Query: 409 ------KQNLPGAEEGDGFFYAKLIK 428 ++ P + GFF +KL + Sbjct: 410 RDWEKVVRSFPHLHDTAGFFISKLTR 435 >UniRef50_UPI00015B4FE9 PREDICTED: similar to CG8545-PA n=2 Tax=Neoptera RepID=UPI00015B4FE9 Length = 796 Score = 333 bits (855), Expect = 8e-90, Method: Composition-based stats. Identities = 98/334 (29%), Positives = 156/334 (46%), Gaps = 30/334 (8%) Query: 122 LRQFQRQQEELLAEFN-ASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRIN 179 LRQ R + E L + + S+L+++L + +P + +E++ + PM +R N Sbjct: 418 LRQPDRSRSEYLELLKTDLCTYFSYNSFLMEKLMQMFPLSELLEFLESSEVQRPMTIRTN 477 Query: 180 RTHHSRDSWLALLDEAGMKGFPHADYPDA--VRLETPAPVHALPGFEDGWVTVQDASAQG 237 R L G+ P + + V + P+ A P + G +Q AS+ Sbjct: 478 TLKTRRRDLAHALINRGVNLDPIGKWTNVGLVVYSSQVPMGATPEYLAGHYILQGASSFL 537 Query: 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMK 296 + L P+ E ILD+CAAPGGK++HI + + + D+++ R+ V N RLG+ Sbjct: 538 PVMALEPKINERILDMCAAPGGKSSHIAALMKNTGVLFSNDVNKDRIKAVIGNFHRLGIT 597 Query: 297 ATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 +V DGR FDR+LLDAPC+ TGV+ + P +K + + DI LQ E Sbjct: 598 NSVICSYDGRKLPSVIKG--FDRVLLDAPCTGTGVVAKDPSVKTNKDEVDIQRCCTLQRE 655 Query: 356 ILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGK-- 409 +L A + ++GG +VY+TCS+LPEEN + L++ D ++ TG Sbjct: 656 LLLAAIDSVNARSESGGIIVYSTCSILPEENEWIVDYALRKR-DVKVVPTGLEFGADGFT 714 Query: 410 ---------------QNLPGAEEGDGFFYAKLIK 428 + P DGF+ AKL K Sbjct: 715 NYRQHRFHPSLKLTKRFYPHMHNMDGFYVAKLKK 748 >UniRef50_C6PCM3 RNA methylase, NOL1/NOP2/sun family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PCM3_CLOTS Length = 466 Score = 333 bits (854), Expect = 9e-90, Method: Composition-based stats. Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 20/300 (6%) Query: 147 SWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYP 206 + +++ + ++ + + P LR+N S D + L + + Sbjct: 19 EDFVNKMRFLLKDDFEKFMMEYEKEPYRGLRVNTLKISVDEF---LRISPFRLISVPWCD 75 Query: 207 DAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE 266 + + G +Q+ SA + L P G+ +LDL AAPGGK+THI Sbjct: 76 TGFYYDQNDKPGKHYYHDAGLFYIQEPSAMAVVEALNPVPGDIVLDLSAAPGGKSTHIAS 135 Query: 267 -VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 + E +V+ +I+ +R+ + +N++R+G++ V + + + FD+IL+DAPC Sbjct: 136 KLNGEGLLVSNEINSKRVKVLAENIERIGIRNAVILNESPEKLEKTFKDYFDKILVDAPC 195 Query: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 S G+ R+ + ++ A Q +ILD+ LK GG +VY+TC+ PEEN Sbjct: 196 SGEGMFRKDETARDEWSLENVLSCAYRQKKILDSASCMLKPGGIMVYSTCTFSPEENEGV 255 Query: 386 IKAFLQRTADAELCETGTPEQP----------------GKQNLPGAEEGDGFFYAKLIKK 429 I FL+ +D EL E E + P +G+G F AKL K Sbjct: 256 IDHFLKNHSDFELIEIYKHEGFDNGHSEWVNGCSDLRKCVRLWPHLLKGEGHFIAKLRKN 315 >UniRef50_UPI0000E87BFE Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87BFE Length = 421 Score = 333 bits (854), Expect = 9e-90, Method: Composition-based stats. Identities = 93/444 (20%), Positives = 166/444 (37%), Gaps = 51/444 (11%) Query: 7 LRSMAAQAVEQVVEQGQSLSNILPPLQ---QKVSDKDKALLQELCFGVLRTLSQLDWLIN 63 A + + + + L + + D++ + E+ +GV+R L+ ++ Sbjct: 5 AIKACADILGESLIKNLPADVQLSYYFKNNRNLGSSDRSDIAEIYYGVIRNKRLLEEIVG 64 Query: 64 KLMARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVL 122 + M + YL+++ + + + + VE Sbjct: 65 DAHCKKM-----ILVYLLVLKGHSIKELSGVTDEYEIEWLVEKKKNKVH----------- 108 Query: 123 RQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ-WQSIVEANNQRPPMWLRINRT 181 ++ + P W+ +L Y E+ + + + LR+N Sbjct: 109 -------------IDSWPTKLSLPDWIWAKLVLYYGEEEAIAFGTSLLSPATLQLRVNSL 155 Query: 182 HH-SRDSWLALLD----EAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQ 236 S + + +K + L + P F G + VQ+ +Q Sbjct: 156 KTLSVQDVVNEFRLSFPDEVVKIKKTELSKQGITLPRGTAIQKHPLFLGGAIEVQEEGSQ 215 Query: 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGM 295 L + G + D CA GGKT + + ++ A DI ++RL+ + LKR G Sbjct: 216 LLTLLLDVKRGHMVADFCAGAGGKTLALSALMKNTGRIYAFDISDRRLANMKQRLKRSGA 275 Query: 296 KATVKQGDGRYPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 Q + DR+L+DAPC+ G +RR+PD+KW + + + ELA Q Sbjct: 276 SNIAMQRISNENDLKIKRLRNKLDRVLVDAPCTGFGTLRRNPDLKWRQTEESLAELAIKQ 335 Query: 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE---------TGTP 404 + IL+A K GG LVYATCS+L +EN I FL+ ++ Sbjct: 336 ASILEAASKLCKKGGYLVYATCSILNDENENIIATFLENNQHFKIIPQHIIMAKSGVDIG 395 Query: 405 EQPGKQNLPGAEEGDGFFYAKLIK 428 E + P + DGFF A + + Sbjct: 396 EGDFLKLNPHTHKTDGFFGALMER 419 >UniRef50_UPI0001C3591B probable ribosomal RNA small subunit methyltransferase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3591B Length = 474 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 129/302 (42%), Gaps = 21/302 (6%) Query: 145 HPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHAD 204 P ++++ ++++ +E+ + LR+N + L + Sbjct: 4 LPEAFKEKMKNLLGTEYEAFLESYEKERVQGLRLNPGKTDEKEF---LAKVPFHLTKIPW 60 Query: 205 YPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHI 264 + ++ P E G +Q+ SA + L P+ G+ +LDLCAAPGGKTT I Sbjct: 61 AREGYYYDSSDRPGKHPYHEAGLYYIQEPSAMAVVELLDPKPGDCVLDLCAAPGGKTTQI 120 Query: 265 L-EVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 + E +++ +I R + N++R+G++ V + + FD +++DA Sbjct: 121 AGRLMGEGFLLSNEIHPARAKILSQNVERMGIRNAVVANETPERLAERFPEFFDGMVVDA 180 Query: 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 PCS G+ R+ + + A Q +ILD+ LK GG +VY+TC+ PEE+ Sbjct: 181 PCSGEGMFRKDEEACRQWSPDHVVMCAARQRQILDSAARMLKAGGRMVYSTCTFSPEEDE 240 Query: 384 LQIKAFLQRTADAELCETGTPEQ-----------------PGKQNLPGAEEGDGFFYAKL 426 I+ FL + E+ + G E + P EG+G + A L Sbjct: 241 QTIEMFLSEHPEFEIEDMGVREGLSPGKPEWGISAAETLRGTYRIWPHLSEGEGHYLAVL 300 Query: 427 IK 428 K Sbjct: 301 RK 302 >UniRef50_A4IGA8 Si:dkey-91i17.1 protein (Fragment) n=21 Tax=Eukaryota RepID=A4IGA8_DANRE Length = 676 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 103/341 (30%), Positives = 155/341 (45%), Gaps = 36/341 (10%) Query: 121 VLRQFQRQQEELLAEFN-------ASDARYLHPSWLLKRLQKAYP-EQWQSIVEANNQRP 172 VL F ++EE Y + +L+ +L + + +EAN Sbjct: 247 VLSNFNEKREEGKERSEYLSLLRADLCTYYSYNQFLISKLMDLFSLSELIDFLEANEVHR 306 Query: 173 PMWLRINRTHHSRDSWLALLDEAGMKGFPHADYP--DAVRLETPAPVHALPGFEDGWVTV 230 P+ +R N R L G+ P + V ++ P+ A P + G + Sbjct: 307 PVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLAGHYML 366 Query: 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDN 289 Q AS+ + L+PQ GE +LD+ AAPGGKTT++ ++ +VA D + RL V N Sbjct: 367 QGASSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANVDRLKSVVGN 426 Query: 290 LKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE 348 + RLG+ V DGR + G FDR+LLDAPCS TGVI + P +K + + DI Sbjct: 427 IHRLGVTNAVICNYDGRQFPKVMGG--FDRVLLDAPCSGTGVISKDPAVKTGKDEADILR 484 Query: 349 LAQLQSEILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTP 404 A LQ E++ + + +TGG LVY TCS++ EEN + L++ + +L TG Sbjct: 485 SAHLQKELILSAIDSVNADSQTGGYLVYCTCSIMVEENEWVVDYALKKR-NVKLVPTGLD 543 Query: 405 EQPG-----------------KQNLPGAEEGDGFFYAKLIK 428 ++ P + DGFF AKL K Sbjct: 544 FGKEGFTRFKEKRFHPSLKLSRRFYPHSHNMDGFFVAKLKK 584 >UniRef50_B1XW23 Fmu (Sun) domain protein n=6 Tax=Burkholderiales RepID=B1XW23_POLNS Length = 519 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 110/444 (24%), Positives = 181/444 (40%), Gaps = 43/444 (9%) Query: 13 QAVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQLDWLINKLMARP 69 + + +++ Q ++ + K+ ++D+AL+ E F +LR ++ ++ + Sbjct: 64 RLLPELLSFEQPADRVVSRYFRSEPKLGNRDRALIAESAFAILRRKNEF----SQFASSG 119 Query: 70 MTGKQRTVHYLIMVGLYQLLYTRIPPHA--ALAETVEGAIAIKRPQLKGLINGVLRQFQR 127 + R + L ++ A A+A+ + L++F Sbjct: 120 EGSQARRLALLGLLSALSEGGLGSANRAESAIADLAHVLKHGEYEW--------LQRFAT 171 Query: 128 QQEELLAEFNASDARYLHPSWLLKRLQKAYPEQW-QSIVEANNQRPPMWLRINRTHHSRD 186 L P WL + E + + ++ + LR N +R+ Sbjct: 172 VDPAALNPL----VCNNLPEWLWDAFGQYPGEDTREELAKSLMHPALLDLRANTMKTNRE 227 Query: 187 SWLALLDEAG--MKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAP 244 LA ++ G + P PD VR+ + PGF+ G VQD +Q LAP Sbjct: 228 ELLAQMNALGGRYQAIPTPYAPDGVRIMGKPALQNTPGFKAGMFEVQDEGSQLLAYLLAP 287 Query: 245 QNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303 + GE ++D CA GGKT I + ++ A+D E+RL+ + R G+ Sbjct: 288 KRGEMVVDFCAGAGGKTLAIGVIMRSTGRLYALDTSERRLANLKPRQARSGLSNVHPVWI 347 Query: 304 GRYPSQWCGE--QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIW 361 + DR+L+DAPCS G +RR+PD+KW + + EL Q Q IL++ Sbjct: 348 DSENDAKIKRLAGKIDRVLVDAPCSGMGTLRRNPDLKWRQTQAGVLELNQKQMSILNSAA 407 Query: 362 PHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG----------------TPE 405 LK GG LVYATCS+LP+EN + FL + E+ + + Sbjct: 408 RLLKPGGRLVYATCSLLPQENQAIAEDFLAKHPQFEVVPAAEVLKSLFPKEKLPLGCSLD 467 Query: 406 QPGKQNLPGAEEGDGFFYAKLIKK 429 P Q P DGFF A KK Sbjct: 468 NPWWQLWPHIHGTDGFFGAVFQKK 491 >UniRef50_C6W4A0 Fmu (Sun) domain protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W4A0_DYAFD Length = 410 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 104/435 (23%), Positives = 192/435 (44%), Gaps = 33/435 (7%) Query: 1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ---KVSDKDKALLQELCFGVLRTLSQ 57 MK + L + + +A++ + + + ++ L + K +D+A + E +G++R Sbjct: 1 MKLHKGLVAASVEALQDIFIKNRQADRVVEQLLKSNKKWGARDRAFIAENVYGIVRWWRL 60 Query: 58 LDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGL 117 + + + + + +G++QL+ P H + +E ++ Sbjct: 61 VKYAAQ--IDKAVESDDFWRI----MGVWQLI---RPVHL---DGLEAPDSLPEWPEFVP 108 Query: 118 ING--VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMW 175 IN V F+R +E L P W+ + W + + A N P+ Sbjct: 109 INAEIV---FERYREGLNTRK----IAQSIPDWIDETGAAELGAAWDAELAALNHTAPVV 161 Query: 176 LRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 LR+N + LL P P+A+ L+ V L F+ G+ VQDA + Sbjct: 162 LRVNTLKTDVSTVRELLGAD--IAEPVPSVPEALVLKKRLNVSGLDSFKSGFFEVQDAGS 219 Query: 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEV-APEAQVVAVDIDEQRLSRVYDNLKRLG 294 Q +L + G ++D CA GGK+ H+ + ++A+DI+ +L + R G Sbjct: 220 QWIAPYLDIREGMSVIDACAGAGGKSLHLAALLGNTGSILAMDIEHHKLQELERRAARNG 279 Query: 295 MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 + + DR+LLD PCS GV+RR+PD KW + + ++ ++Q+ Sbjct: 280 VTNLSTMLINSDKIIENLAETTDRLLLDVPCSGLGVLRRNPDSKWKLKPEFLDKIRKVQA 339 Query: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPG 414 +IL+ +K GG +VYATCS+LP E+ Q+++F++R + ++ P Sbjct: 340 QILENYSKMVKKGGKMVYATCSILPSESEEQVRSFMKRH------QADWNFVSEHRSSPA 393 Query: 415 AEEGDGFFYAKLIKK 429 + DGF+ A L +K Sbjct: 394 RDGFDGFYMALLERK 408 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.176 0.565 Lambda K H 0.267 0.0537 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,301,426,440 Number of Sequences: 3077464 Number of extensions: 179486705 Number of successful extensions: 572125 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2691 Number of HSP's successfully gapped in prelim test: 3532 Number of HSP's that attempted gapping in prelim test: 555660 Number of HSP's gapped (non-prelim): 7981 length of query: 429 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 297 effective length of database: 634,171,108 effective search space: 188348819076 effective search space used: 188348819076 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 95 (40.8 bits)