09/01/2012 01:45:21 : INFO  : Run start: Mon Jan  9 01:45:20 GMT 2012
09/01/2012 01:45:24 : INFO  : Initialised job
09/01/2012 01:45:25 : INFO  : Renaming log file 'phyre2_20120109_014520.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/82ed813fa5e8cc96/phyre_20120109_014520.log'
09/01/2012 01:45:26 : INFO  : Initialised job:
Sequence
>batch____
MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW
LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLING
VLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINR
THHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMT
WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVK
QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI
WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG
FFYAKLIKK

09/01/2012 01:45:27 : INFO  : Checked sequence
09/01/2012 01:45:29 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 01:45:29 : INFO  : PSI-BLAST 3 iterations
09/01/2012 01:48:09 : INFO  : PSI-BLAST 5 iterations
09/01/2012 01:51:12 : INFO  : Finished PSI-BLAST
09/01/2012 01:51:14 : INFO  : Running Buildali to generate a3m file
09/01/2012 02:08:49 : INFO  : Converting to HMM
09/01/2012 02:08:54 : INFO  : Calibrating HMM
09/01/2012 02:09:14 : INFO  : Searching HMM database
09/01/2012 02:19:10 : INFO  : Finished buildali
09/01/2012 02:19:11 : INFO  : Predicting secondary structure
09/01/2012 02:19:18 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 02:19:19 : INFO  : Predicting Disordered regions
09/01/2012 02:19:22 : INFO  : Predicted Disorder (Disopred)
09/01/2012 02:19:24 : INFO  : Running memsat_svm check
09/01/2012 02:23:28 : INFO  : Globular protein
09/01/2012 02:23:29 : INFO  : Predicted Transmembrane (memsat_svm) ID '82ed813fa5e8cc96'
09/01/2012 02:23:31 : INFO  : Initialising fold library search
09/01/2012 02:23:34 : INFO  : Initialised search input
09/01/2012 02:23:35 : INFO  : Building Ensemble models
09/01/2012 02:23:39 : INFO  : Building hh.c1sqgA_.model.1.pdb
09/01/2012 02:23:52 : INFO  : Building c1sqgA_.1.pdb
09/01/2012 02:24:03 : INFO  : Building c2yxlA_.2.pdb
09/01/2012 02:24:15 : INFO  : Building c3m6wA_.3.pdb
09/01/2012 02:24:26 : INFO  : Building c2frxD_.4.pdb
09/01/2012 02:24:37 : INFO  : Building c3m4xA_.5.pdb
09/01/2012 02:24:49 : INFO  : Building d1sqga2.6.pdb
09/01/2012 02:25:01 : INFO  : Building d1ixka_.7.pdb
09/01/2012 02:25:11 : INFO  : Building c3a4tA_.8.pdb
09/01/2012 02:25:23 : INFO  : Building d2b9ea1.9.pdb
09/01/2012 02:25:35 : INFO  : Building d1sqga1.10.pdb
09/01/2012 02:25:45 : INFO  : Building c2jr0A_.11.pdb
09/01/2012 02:25:55 : INFO  : Building d1ey1a_.12.pdb
09/01/2012 02:26:05 : INFO  : Building d1tzva_.13.pdb
09/01/2012 02:26:14 : INFO  : Building d2as0a2.14.pdb
09/01/2012 02:26:25 : INFO  : Building d1eyva_.15.pdb
09/01/2012 02:26:35 : INFO  : Building c1eyvA_.16.pdb
09/01/2012 02:26:44 : INFO  : Building d1wxxa2.17.pdb
09/01/2012 02:26:55 : INFO  : Building c2as0A_.18.pdb
09/01/2012 02:27:05 : INFO  : Building d2b78a2.19.pdb
09/01/2012 02:27:15 : INFO  : Building c1wxwA_.20.pdb
09/01/2012 02:27:39 : INFO  : Finished HH model building
09/01/2012 02:27:40 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 02:28:24 : INFO  : html domain output complete ID '82ed813fa5e8cc96'
09/01/2012 03:20:51 : INFO  : Run end  : Mon Jan  9 03:20:50 GMT 2012
