Job Description P0A9F3 Confidence 99.88% Date Thu Jan 5 11:10:03 GMT 2012 Rank 12 Aligned Residues 87 % Identity 36% Template c3m1eA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	Q	Q	L	R	Y	I	V	E	V	V	N	H	N	L	N	V	S	S	T	A	E	G	L	Y	T	S	Q	P	G	I	S	K	Q	V	R	M	L	E	D	E	L	G	I	Q	I	F	S	R	S	G	K	H	L	T	Q	V	T	P	A	G	Q	E	I	I	R	I	A	R	E	V	L	S	K	V	D	A	I
Query Conservation
Alig confidence																		.																																									.
Template Conservation																		.																																									.
Template Sequence		M	E	L	R	H	L	R	Y	F	V	A	V	V	E	E	Q	.	S	F	T	K	A	A	D	K	L	C	I	A	Q	P	P	L	S	R	Q	I	Q	N	L	E	E	E	L	G	I	Q	L	L	E	R	G	S	R	P	V	K	.	T	T	P	E	G	H	F	F	Y	Q	Y	A	I	K	L	L	S	N	V	D	Q	M
Template Known Secondary structure																	T	.									T	T	S																	T	S			B		T	T		S	S			.	B
Template Predicted Secondary structure																		.																																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	A	G	E	H	T	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	M	T	K	R	I	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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