BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (421 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C9PMG6 ATP-dependent RNA helicase RhlB n=1 Tax=Pasteure... 609 e-173 UniRef50_B1KQF6 ATP-dependent RNA helicase rhlB n=10 Tax=Proteob... 585 e-166 UniRef50_A1SAL1 ATP-dependent RNA helicase rhlB n=142 Tax=Gammap... 579 e-164 UniRef50_Q4UPY5 ATP-dependent RNA helicase rhlB n=186 Tax=Gammap... 443 e-123 UniRef50_C5S9J5 DEAD/DEAH box helicase domain protein n=6 Tax=Ga... 428 e-118 UniRef50_Q3J811 DEAD/DEAH box helicase-like n=2 Tax=Nitrosococcu... 416 e-115 UniRef50_A5EYB1 ATP-dependent rna helicase Rhl n=1 Tax=Dicheloba... 389 e-106 UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Pr... 385 e-105 UniRef50_A3JG19 ATP-dependent RNA helicase n=1 Tax=Marinobacter ... 365 1e-99 UniRef50_A0LLL9 DEAD/DEAH box helicase domain protein n=2 Tax=De... 335 2e-90 UniRef50_Q88NB7 ATP-dependent RNA helicase rhlB n=50 Tax=Gammapr... 335 3e-90 UniRef50_D1NAH8 DEAD/DEAH box helicase domain protein n=1 Tax=Vi... 330 6e-89 UniRef50_A6V0P4 ATP-dependent RNA helicase RhlB n=15 Tax=Pseudom... 329 1e-88 UniRef50_A6DML6 ATP-dependent RNA helicase n=1 Tax=Lentisphaera ... 321 3e-86 UniRef50_Q1QAQ0 DEAD/DEAH box helicase-like n=5 Tax=Gammaproteob... 320 4e-86 UniRef50_Q1N6E2 ATP-dependent RNA helicase n=1 Tax=Bermanella ma... 320 9e-86 UniRef50_C0QD57 RecQ2 n=3 Tax=Desulfobacterales RepID=C0QD57_DESAH 315 2e-84 UniRef50_C8PPF9 ATP-dependent RNA helicase DbpA n=1 Tax=Treponem... 308 2e-82 UniRef50_Q6APU7 Related to ATP-dependent RNA helicase (RhlE) n=1... 306 1e-81 UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=De... 287 6e-76 UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=As... 286 8e-76 UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 284 5e-75 UniRef50_A6VX62 DEAD/DEAH box helicase domain protein n=1 Tax=Ma... 283 7e-75 UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttle... 281 3e-74 UniRef50_Q6MHS8 ATP-dependent RNA helicase n=1 Tax=Bdellovibrio ... 278 2e-73 UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eg... 277 4e-73 UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT... 277 5e-73 UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteo... 275 2e-72 UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Cl... 275 2e-72 UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteoba... 275 2e-72 UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desu... 275 3e-72 UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepI... 274 4e-72 UniRef50_Q04Q15 Superfamily II DNA and RNA helicase n=6 Tax=Lept... 274 5e-72 UniRef50_C5CB97 DNA/RNA helicase, superfamily II n=23 Tax=Bacter... 273 8e-72 UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria R... 273 9e-72 UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 273 1e-71 UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box ... 272 2e-71 UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax... 271 3e-71 UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=B... 271 5e-71 UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=F... 270 5e-71 UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcu... 270 6e-71 UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Ne... 270 6e-71 UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae Rep... 270 7e-71 UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organism... 270 8e-71 UniRef50_B0U160 DEAD-box subfamily ATP-dependent helicase n=18 T... 270 1e-70 UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. N... 270 1e-70 UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Ni... 270 1e-70 UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospi... 269 2e-70 UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=be... 269 2e-70 UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=A... 268 2e-70 UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cell... 268 3e-70 UniRef50_O26305 ATP-dependent RNA helicase, eIF-4A family n=1 Ta... 268 4e-70 UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root R... 268 4e-70 UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=De... 267 6e-70 UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Ni... 267 6e-70 UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Cl... 267 7e-70 UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Ch... 266 2e-69 UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 Rep... 265 2e-69 UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Br... 265 2e-69 UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2... 265 2e-69 UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=A... 265 2e-69 UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular org... 265 2e-69 UniRef50_C7PAU3 DEAD/DEAH box helicase domain protein n=7 Tax=Ba... 265 2e-69 UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=G... 264 4e-69 UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brev... 264 5e-69 UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 264 5e-69 UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=C... 264 6e-69 UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Nept... 263 6e-69 UniRef50_Q48FQ8 ATP-dependent RNA helicase, DEAD box family n=23... 263 9e-69 UniRef50_B7VSB7 ATP-dependent RNA helicase n=74 Tax=Gammaproteob... 263 1e-68 UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Ve... 263 1e-68 UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Pr... 262 2e-68 UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Al... 262 2e-68 UniRef50_Q01PH0 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 262 2e-68 UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 262 2e-68 UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae... 261 3e-68 UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 261 4e-68 UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clos... 261 5e-68 UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 261 5e-68 UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus Re... 260 6e-68 UniRef50_A1S988 Superfamily II DNA and RNA helicase-like protein... 260 8e-68 UniRef50_C6CYC6 DEAD/DEAH box helicase domain protein n=89 Tax=F... 260 9e-68 UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Ta... 259 9e-68 UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gru... 259 1e-67 UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptob... 259 1e-67 UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family... 259 1e-67 UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax... 259 2e-67 UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmat... 258 2e-67 UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured me... 258 3e-67 UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=B... 258 3e-67 UniRef50_D2B0M6 Putative uncharacterized protein n=1 Tax=Strepto... 258 3e-67 UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ... 258 3e-67 UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=De... 258 3e-67 UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=c... 258 3e-67 UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Cl... 258 4e-67 UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Ak... 258 4e-67 UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SER... 258 4e-67 UniRef50_A0KZD5 DEAD/DEAH box helicase domain protein n=22 Tax=A... 257 5e-67 UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomona... 257 5e-67 UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 T... 257 5e-67 UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Ba... 257 6e-67 UniRef50_C1D891 Putative ATP-dependent RNA helicase protein n=1 ... 257 7e-67 UniRef50_C8W8S2 DEAD/DEAH box helicase domain protein n=2 Tax=At... 256 1e-66 UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Eu... 256 1e-66 UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria... 256 1e-66 UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 256 1e-66 UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales Re... 256 1e-66 UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=A... 256 2e-66 UniRef50_A6LUG3 DEAD/DEAH box helicase domain protein n=33 Tax=F... 256 2e-66 UniRef50_C4K3R7 ATP-dependent RNA helicase n=4 Tax=Enterobacteri... 255 2e-66 UniRef50_B1ZXI6 DEAD/DEAH box helicase domain protein n=3 Tax=Ve... 255 2e-66 UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria Rep... 255 3e-66 UniRef50_Q31EF0 ATP-dependent RNA helicase n=1 Tax=Thiomicrospir... 254 3e-66 UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Proc... 254 3e-66 UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms R... 254 3e-66 UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pn... 254 4e-66 UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B... 254 4e-66 UniRef50_C1XGK2 ATP-dependent RNA helicase DbpA n=2 Tax=Meiother... 254 4e-66 UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alp... 254 4e-66 UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria... 254 4e-66 UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dy... 253 6e-66 UniRef50_C9KJK1 ATP-dependent RNA helicase DeaD n=3 Tax=Veillone... 253 8e-66 UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax... 253 1e-65 UniRef50_C1I992 DEAD/DEAH box helicase domain-containing protein... 253 1e-65 UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=G... 252 1e-65 UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdema... 252 2e-65 UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zy... 252 2e-65 UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Sp... 252 2e-65 UniRef50_Q30SZ2 DEAD/DEAH box helicase-like protein n=2 Tax=Camp... 251 2e-65 UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 251 2e-65 UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicas... 251 3e-65 UniRef50_D0MH79 DEAD/DEAH box helicase domain protein n=1 Tax=Rh... 251 3e-65 UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=De... 251 4e-65 UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=c... 251 4e-65 UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteri... 251 4e-65 UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bac... 251 4e-65 UniRef50_C0AEG7 DEAD/DEAH box helicase domain protein (Fragment)... 251 4e-65 UniRef50_B8JG82 DEAD/DEAH box helicase domain protein n=8 Tax=Ba... 251 5e-65 UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma ... 250 5e-65 UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulv... 250 6e-65 UniRef50_Q7UNV7 ATP-dependent RNA helicase n=3 Tax=Planctomyceta... 250 6e-65 UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteob... 250 6e-65 UniRef50_A6FEC9 ATP-dependent RNA helicase, DEAD box family n=1 ... 250 7e-65 UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Fi... 250 8e-65 UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=... 249 9e-65 UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family... 249 1e-64 UniRef50_Q4KGF7 ATP-dependent RNA helicase SrmB n=25 Tax=Gammapr... 249 1e-64 UniRef50_B9ZPI5 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 249 2e-64 UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=A... 249 2e-64 UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=... 249 2e-64 UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter... 248 2e-64 UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Ta... 248 3e-64 UniRef50_Q6A841 Putative ATP-dependent RNA helicase n=2 Tax=Prop... 248 3e-64 UniRef50_D2QS74 DEAD/DEAH box helicase domain protein n=1 Tax=Sp... 248 4e-64 UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 248 4e-64 UniRef50_D1BXK2 DEAD/DEAH box helicase domain protein n=6 Tax=Ac... 247 5e-64 UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 247 6e-64 UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatim... 247 6e-64 UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hy... 247 6e-64 UniRef50_A4C3X3 RNA helicase DeaD n=3 Tax=Alteromonadales RepID=... 246 8e-64 UniRef50_B7IA63 DEAD/DEAH box helicase n=17 Tax=Acinetobacter Re... 246 1e-63 UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Berm... 246 1e-63 UniRef50_Q11WD3 Possible ATP-dependent RNA helicase n=8 Tax=Sphi... 246 1e-63 UniRef50_C4V5M7 DEAD/DEAH box helicase domain protein n=1 Tax=Se... 246 1e-63 UniRef50_B2S5R2 ATP-dependent RNA helicase, DEAD/DEAH box family... 246 1e-63 UniRef50_Q1QYG3 DEAD/DEAH box helicase-like protein n=1 Tax=Chro... 246 1e-63 UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Ko... 246 1e-63 UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1... 246 2e-63 UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacte... 245 2e-63 UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Te... 245 2e-63 UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein... 245 2e-63 UniRef50_A3ZWP8 ATP-dependent RNA helicase n=1 Tax=Blastopirellu... 245 2e-63 UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular or... 245 2e-63 UniRef50_B3CMR4 ATP-dependent RNA helicase, DeaD/DeaH box family... 245 2e-63 UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 245 3e-63 UniRef50_A9BJS7 DEAD/DEAH box helicase domain protein n=2 Tax=ce... 244 3e-63 UniRef50_B5IG60 DEAD/DEAH box helicase domain protein n=2 Tax=Ac... 244 4e-63 UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gam... 244 4e-63 UniRef50_Q30YG9 DEAD/DEAH box helicase-like n=9 Tax=Deltaproteob... 244 4e-63 UniRef50_Q484Q1 RNA helicase DeaD n=1 Tax=Colwellia psychrerythr... 244 5e-63 UniRef50_A9A5S3 DEAD/DEAH box helicase domain protein n=5 Tax=Th... 244 5e-63 UniRef50_Q2BDP3 ATP-dependent RNA helicase n=2 Tax=Bacillus RepI... 244 5e-63 UniRef50_UPI00016C471F RNA helicase DeaD n=1 Tax=Gemmata obscuri... 244 5e-63 UniRef50_C6WM51 DEAD/DEAH box helicase domain protein n=83 Tax=A... 244 6e-63 UniRef50_Q480Z7 ATP-dependent RNA helicase, DEAD box family n=2 ... 244 6e-63 UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales ... 243 7e-63 UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fe... 243 7e-63 UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 243 7e-63 UniRef50_B6IS62 DEAD/DEAH box helicase protein n=1 Tax=Rhodospir... 243 7e-63 UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24... 243 8e-63 UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hy... 243 9e-63 UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 243 9e-63 UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID... 243 1e-62 UniRef50_A0JYP4 DEAD/DEAH box helicase domain protein n=14 Tax=A... 243 1e-62 UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 243 1e-62 UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepI... 243 1e-62 UniRef50_B5JNP6 DEAD/DEAH box helicase domain protein n=1 Tax=Ve... 242 2e-62 UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Cl... 242 2e-62 UniRef50_C7PCT4 DEAD/DEAH box helicase domain protein n=20 Tax=B... 242 2e-62 UniRef50_A4BBH5 Probable ATP-dependent RNA helicase n=1 Tax=Rein... 242 2e-62 UniRef50_A8L2H9 DEAD/DEAH box helicase domain protein n=2 Tax=Fr... 242 2e-62 UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=R... 242 2e-62 UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteri... 241 3e-62 UniRef50_D1BLQ6 DEAD/DEAH box helicase domain protein n=3 Tax=Ve... 241 3e-62 UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 ... 241 3e-62 UniRef50_D2Q2K3 DEAD/DEAH box helicase domain protein n=1 Tax=Kr... 241 4e-62 UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lent... 241 5e-62 UniRef50_Q5SM34 ATP-dependent RNA helicase n=4 Tax=Thermus RepID... 241 5e-62 UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular orga... 241 5e-62 UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=P... 240 7e-62 UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms Rep... 240 8e-62 UniRef50_C8P164 ATP-dependent RNA helicase DbpA n=1 Tax=Erysipel... 240 8e-62 UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostri... 240 8e-62 UniRef50_B5ZLE2 DEAD/DEAH box helicase domain protein n=2 Tax=Gl... 240 9e-62 UniRef50_B5ZGC1 DEAD/DEAH box helicase domain protein n=3 Tax=Ac... 240 9e-62 UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=En... 239 1e-61 UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 239 1e-61 UniRef50_A0LD66 DEAD/DEAH box helicase domain protein n=1 Tax=Ma... 239 1e-61 UniRef50_Q98RE0 ATP-DEPENDENT RNA HELICASE n=1 Tax=Mycoplasma pu... 239 1e-61 UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 239 1e-61 UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 ... 239 2e-61 UniRef50_Q2YZZ9 Putative uncharacterized protein n=2 Tax=Bacteri... 239 2e-61 UniRef50_UPI0001C36A36 DEAD/DEAH box helicase domain-containing ... 239 2e-61 UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (Dea... 239 2e-61 UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA 238 3e-61 UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimo... 238 3e-61 UniRef50_A5FST0 DEAD/DEAH box helicase domain protein n=5 Tax=De... 238 3e-61 UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 T... 238 3e-61 UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 238 4e-61 UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A... 238 4e-61 UniRef50_C7H231 ATP-dependent RNA helicase DeaD n=4 Tax=Ruminoco... 238 4e-61 UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 237 5e-61 UniRef50_C6XHW2 ATP dependent RNA helicase protein n=1 Tax=Candi... 237 6e-61 UniRef50_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia... 237 6e-61 UniRef50_C5C5R9 DEAD/DEAH box helicase domain protein n=1 Tax=Be... 237 6e-61 UniRef50_D1N203 DEAD/DEAH box helicase domain protein n=1 Tax=Vi... 237 6e-61 UniRef50_D1B384 DEAD/DEAH box helicase domain protein n=1 Tax=Su... 237 8e-61 UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase prote... 237 8e-61 UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3... 236 8e-61 UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria... 236 9e-61 UniRef50_B1V958 DEAD/DEAH box helicase-like n=4 Tax=Candidatus P... 236 9e-61 UniRef50_D2VEC4 DEAD/DEAH box helicase n=1 Tax=Naegleria gruberi... 236 9e-61 UniRef50_C0N6Y6 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 236 1e-60 UniRef50_C1CWT4 Putative DEAD-box ATP-dependent RNA helicase 3 n... 236 1e-60 UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, s... 236 1e-60 UniRef50_C4LK58 Putative ATP-dependent RNA helicase n=1 Tax=Cory... 236 1e-60 UniRef50_Q2FKY7 DEAD/DEAH box helicase-like n=1 Tax=Methanospiri... 236 2e-60 UniRef50_B0L0X0 VASA n=2 Tax=Penaeidae RepID=B0L0X0_FENCH 236 2e-60 UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=B... 235 2e-60 UniRef50_A4EAF2 Putative uncharacterized protein n=4 Tax=Collins... 235 2e-60 >UniRef50_C9PMG6 ATP-dependent RNA helicase RhlB n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PMG6_9PAST Length = 449 Score = 609 bits (1571), Expect = e-173, Method: Compositional matrix adjust. Identities = 299/401 (74%), Positives = 346/401 (86%), Gaps = 3/401 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M +L++ +FSD L+ KV+ ALE+KGF CTPIQAL+LP++LAG+D+AGQAQTGTGKT Sbjct: 26 MQNNYLSQLRFSDLPLNSKVLSALERKGFEYCTPIQALSLPISLAGKDIAGQAQTGTGKT 85 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 MAFLT+TFH+LL+H + ++ +QPRALI+APTRELAVQI+ DAE L++AT LK GLAYG Sbjct: 86 MAFLTATFHHLLTHQS--EKNTSQPRALILAPTRELAVQINNDAELLSKATNLKTGLAYG 143 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 GDGY+KQLK +E GVDILIGTTGR+IDY KQ I L IQVVVLDEADRM+DLGFIKDIR Sbjct: 144 GDGYEKQLKTIEKGVDILIGTTGRVIDYVKQGIICLDQIQVVVLDEADRMFDLGFIKDIR 203 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 +L R+ P RL MLFSATLSY+VRELAFE MN+ EY+E+EP QKTGHRIKEELFYPSN Sbjct: 204 YLLRKCPAPEARLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSN 263 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 ++KM LL TL+EEEWP+R I+FANTKHRCEEIWG+L+ADGHRVGLLTGDVAQKKRL +L Sbjct: 264 QDKMALLLTLLEEEWPERCIVFANTKHRCEEIWGYLSADGHRVGLLTGDVAQKKRLSLLK 323 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +FT GDLDILVATDVAARGLHI VTHVFNYDLPDDCEDYVHRIGRTGRAG SG SIS A Sbjct: 324 QFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDCEDYVHRIGRTGRAGESGVSISFA 383 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 CEEYA+NLPAIE YI HSIPVS+Y+ AL+ +LPKP RL R Sbjct: 384 CEEYAMNLPAIENYIAHSIPVSQYDAKALL-ELPKPHRLKR 423 >UniRef50_B1KQF6 ATP-dependent RNA helicase rhlB n=10 Tax=Proteobacteria RepID=RHLB_SHEWM Length = 441 Score = 585 bits (1509), Expect = e-166, Method: Compositional matrix adjust. Identities = 280/426 (65%), Positives = 339/426 (79%), Gaps = 5/426 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+THL+ QKF+DF+L+ ++ AL + GF CTPIQAL+LP+ L +D+AGQAQTGTGKT Sbjct: 1 MSETHLSNQKFADFSLNKEIKTALNESGFEFCTPIQALSLPILLQKKDIAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +AFL +TF +LLS P R++NQPRA+IMAPTRELA+QI DA LA+ TGLK+G+ YG Sbjct: 61 LAFLVATFDHLLSTPVPEGRQLNQPRAMIMAPTRELAIQIAKDATLLAKHTGLKVGIVYG 120 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G+ YD Q KVL+ GVDILIGTTGR+IDY +Q INL AIQ VVLDEADRM+DLGFIKDIR Sbjct: 121 GESYDVQRKVLDKGVDILIGTTGRIIDYVRQGIINLSAIQAVVLDEADRMFDLGFIKDIR 180 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 +LFRRMP A RLNMLFSATLS +V+ELA++ MN E + + P +KT IKEE+FYPS Sbjct: 181 FLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVVIAPNEKTSKNIKEEIFYPSM 240 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 +EKMRLL +LIEE+WP++AI+F+NTKH CE +W L DGHRVGLLTGDV QKKR+RIL+ Sbjct: 241 DEKMRLLLSLIEEDWPEKAIVFSNTKHSCENVWSWLEGDGHRVGLLTGDVPQKKRIRILE 300 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +FT G LDILVATDVAARGLHI V+HV+NYDLPDDCEDYVHRIGRTGRAG G S+S A Sbjct: 301 QFTEGKLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGKKGVSVSFA 360 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP---RTGNGPRRTGAP--R 415 CEEYALNLPAIE YI HSIPV+ Y+ + L+ D+P P+R+ R R G +G P R Sbjct: 361 CEEYALNLPAIEEYITHSIPVTNYDSEGLLDDIPAPIRVHRKHNNRPQQGRNNSGRPQGR 420 Query: 416 NRRRSG 421 N R+G Sbjct: 421 NGNRAG 426 >UniRef50_A1SAL1 ATP-dependent RNA helicase rhlB n=142 Tax=Gammaproteobacteria RepID=RHLB_SHEAM Length = 439 Score = 579 bits (1492), Expect = e-164, Method: Compositional matrix adjust. Identities = 278/426 (65%), Positives = 349/426 (81%), Gaps = 6/426 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+THLT+QKF+D L +V +AL + GF +CTPIQAL+LP+ L +D+AGQAQTGTGKT Sbjct: 1 MSETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +AFL +TF++LL+ P R++NQPRA++MAPTRELA+QI DA L++ +GLK+G+ YG Sbjct: 61 LAFLVATFNHLLTTPVPEHRQLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYG 120 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G+GY+ Q KVL+ GVD+LIGTTGR+IDY +Q INLGAIQ VVLDEADRM+DLGFIKDIR Sbjct: 121 GEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQAVVLDEADRMFDLGFIKDIR 180 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 +LF RMP A +RLNMLFSATLS +V+ELA++ MN+ +E+ PE+KT IKEE+FYPS Sbjct: 181 FLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSM 240 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 E+K++LL +LIEE+WP++AI+FANTK++CE +W L ADGHRVGLLTGDV QKKRL+IL+ Sbjct: 241 EDKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILE 300 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +FT+ +LDILVATDVAARGLHI V+HV+NYDLPDDCEDYVHRIGRTGRAG G S+S A Sbjct: 301 QFTQSELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFA 360 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR-PRTG--NGPRRTGAPR-- 415 CEEYALNLPAIE YI HSIPV+ Y+ DAL+ D+P P+++ R P G N R G+PR Sbjct: 361 CEEYALNLPAIEDYIKHSIPVTSYDRDALI-DIPPPVKIHRKPHAGGRNLRDRNGSPRPS 419 Query: 416 NRRRSG 421 RSG Sbjct: 420 GSHRSG 425 >UniRef50_Q4UPY5 ATP-dependent RNA helicase rhlB n=186 Tax=Gammaproteobacteria RepID=RHLB_XANC8 Length = 573 Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust. Identities = 225/401 (56%), Positives = 277/401 (69%), Gaps = 2/401 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS LT+ FS F LHP +V LE GF CTPIQAL LP+ L G DVAGQAQTGTGKT Sbjct: 1 MSDKPLTDLTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +AFL + + LL PA+ADRK PRALI+APTRELA+QIH DA GL+ L YG Sbjct: 61 LAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG 120 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHI-NLGAIQVVVLDEADRMYDLGFIKDI 179 G YDKQ ++L+ GVD++I T GRLIDY KQ+ + +L A ++ VLDEADRM+DLGFIKDI Sbjct: 121 GVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI 180 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R+L RRMP R +LFSATLS+RV ELA+E MN E + VE E T R+++ +++PS Sbjct: 181 RFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPS 240 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +EEK LL L+ R ++F NTK E + L G+RVG+L+GDV QKKR +L Sbjct: 241 DEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLL 300 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F +G L+ILVATDVAARGLHI V +V+NYDLP D EDYVHRIGRT R G G +IS Sbjct: 301 NRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF 360 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 ACE YA++LP IE YI IPV + L+T LP+ R T Sbjct: 361 ACERYAMSLPDIEAYIEQKIPVEPVTTE-LLTPLPRTPRAT 400 >UniRef50_C5S9J5 DEAD/DEAH box helicase domain protein n=6 Tax=Gammaproteobacteria RepID=C5S9J5_CHRVI Length = 683 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/463 (50%), Positives = 290/463 (62%), Gaps = 53/463 (11%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ THLT +F AL P+++ L + GF CTPIQA LP+ L G D+AGQAQTGTGKT Sbjct: 1 MTDTHLTSTRFDSLALDPRILAGLAEAGFTQCTPIQAETLPIALQGHDIAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHP----------------------------AIADRKVNQPRA----- 87 AFL + LL P A A ++P + Sbjct: 61 AAFLVALMQRLLHEPPEAMPESAAAPETPVSADGSPETESLDPANALEAESEPESAPAPA 120 Query: 88 --------LIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILI 139 L++APTRELAVQIH D LA+ TGL+ + YGG GY +Q L +GVDILI Sbjct: 121 RRRRGPRALVLAPTRELAVQIHKDTLALAKHTGLRSTVVYGGTGYQQQRDELAAGVDILI 180 Query: 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSA 199 GT GRLIDY KQ+ +L I+VVVLDEADRM+DLGFIKDIR+LFR+MPP QRL MLFSA Sbjct: 181 GTPGRLIDYYKQHVFDLKRIEVVVLDEADRMFDLGFIKDIRYLFRQMPPVEQRLGMLFSA 240 Query: 200 TLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPD-R 258 TLSYRV ELA+E MN+ +++E EQ T R+++ + +NEEK+ LL LI WPD R Sbjct: 241 TLSYRVTELAYEHMNHPRLVKIETEQVTADRVRQVCYMTANEEKIPLLLGLIRG-WPDGR 299 Query: 259 AIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAAR 318 I+F NTK + +WG+L +G +L+GDV Q KRL++L +FT G L +LV TDVAAR Sbjct: 300 IIVFVNTKREADRVWGYLQGNGIDTAVLSGDVPQPKRLKLLRDFTNGTLPVLVGTDVAAR 359 Query: 319 GLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHS 378 GLHIP VTHV NYDLP+D EDYVHRIGRT RAGA+G ++S CE YA L IE YIG Sbjct: 360 GLHIPDVTHVVNYDLPEDPEDYVHRIGRTARAGAAGDAVSFVCETYAFCLLDIEQYIGIK 419 Query: 379 IPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 +PV +P AL+ ++ PR+ P R A R RR G Sbjct: 420 VPVEPVDP-ALLAEV-------DPRSRIRPDR--ADREERRDG 452 >UniRef50_Q3J811 DEAD/DEAH box helicase-like n=2 Tax=Nitrosococcus oceani RepID=Q3J811_NITOC Length = 431 Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust. Identities = 215/379 (56%), Positives = 267/379 (70%), Gaps = 2/379 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ +E F L +++ ++K GF CTPIQALALPL LAG DVAGQAQTGTGKT Sbjct: 1 MTNPDFSEISFDSLNLAEALIQGIQKAGFAICTPIQALALPLLLAGEDVAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +FL +T LL P+ + QPR LI+APTRELA+Q+ DA+ L + T LK +G Sbjct: 61 ASFLLATMQCLLREPSAGAGQ--QPRGLIVAPTRELALQVSKDAQFLGQYTNLKCVAVHG 118 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Y KQ +LE G DILIGT GRLIDY +Q I IQVVVLDEADRM+DLGFI+DIR Sbjct: 119 GANYRKQRHLLEQGCDILIGTPGRLIDYYQQRIIGFKKIQVVVLDEADRMFDLGFIRDIR 178 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 ++ RR+PP ++RL MLFSATLS RV ELA+E MNN + + +EP++ T +I E +++P+N Sbjct: 179 YILRRLPPPDKRLGMLFSATLSLRVMELAYEYMNNPQLLRIEPQKVTVDKITERVYFPAN 238 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EEK+ LL L + P AI+F NTKH E++WG+L +G + LL+ DV Q KR R+L Sbjct: 239 EEKISLLLALFKRLVPRHAIVFTNTKHVAEKVWGYLEGNGFKAALLSSDVPQGKRQRLLA 298 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F ILVATDVAARGLHI VTHVFNYDLP D EDYVHRIGRT RAGASG ++S A Sbjct: 299 AFQDRIYPILVATDVAARGLHISTVTHVFNYDLPQDPEDYVHRIGRTARAGASGLAVSFA 358 Query: 361 CEEYALNLPAIETYIGHSI 379 CE+YA +LP IE YIGH + Sbjct: 359 CEDYAFSLPDIEEYIGHKV 377 >UniRef50_A5EYB1 ATP-dependent rna helicase Rhl n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYB1_DICNV Length = 432 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/397 (50%), Positives = 265/397 (66%), Gaps = 4/397 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ + F+DF +H ++EALE F TPIQA LPLTLAG DV G AQTGTGKT Sbjct: 1 MTNENKNTAHFTDFPIHSALLEALEDIHFTKTTPIQAQTLPLTLAGYDVMGIAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AFL S HYL+++P K P A+++APTRELA+QI + + L TGL YG Sbjct: 61 AAFLLSLMHYLMTNPV--HPKAKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAIYG 118 Query: 121 GDGYDKQLKVLES-GVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 G + Q K+ ++ VD++IGT GR+ID KQ L I+V VLDEADRM+DLGFI D+ Sbjct: 119 GTSIEHQKKLFQACNVDVIIGTPGRIIDLFKQKVFRLKNIEVCVLDEADRMFDLGFIDDV 178 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R+L R+MPPA +RLN+LFSAT+ +V+ELA+E N + + +E +Q T + I L++ + Sbjct: 179 RYLLRQMPPAYERLNLLFSATMPQKVQELAYEHFNAPKVVAIESQQTTANNITHYLYHTA 238 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 EK LL L E P+R++IF NTKH E + L A+G+ L+GDVAQKKR +I+ Sbjct: 239 KHEKTPLLLGLFARERPERSMIFLNTKHDLERLSLVLTANGYHNAALSGDVAQKKREQII 298 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 +F G ++I+VATDVAARG+HI +THVFNYDLP EDYVHRIGRT RAGASG +IS Sbjct: 299 RDFQEGTVNIVVATDVAARGIHIDGITHVFNYDLPQIAEDYVHRIGRTARAGASGTAISF 358 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKP 396 ACEEY +LP IE ++G IPV ++L+ D+ P Sbjct: 359 ACEEYVYSLPEIEHFLGEKIPVKPIE-ESLIVDVIPP 394 >UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Proteobacteria RepID=C6E4K1_GEOSM Length = 490 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 203/414 (49%), Positives = 268/414 (64%), Gaps = 8/414 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF++ + +V + +++ GF CTPIQ ALPL L G+DVAGQAQTGTGKT FL S F Sbjct: 2 KFTELKIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFT 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 LLS + PRALI+APTREL VQI DA+ L + TG + YGG Y KQ Sbjct: 62 KLLSQAKTGGE--HHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRD 119 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L++G DI+IGT GRLIDY KQ ++ ++ +V+DEADRM+D+GFI D+R++ RR+PP Sbjct: 120 ALKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPY 179 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 ++R N+LFSATL+ RV ELA+E MN E + V PEQ T R+++ L++ S +EK LL Sbjct: 180 DKRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLLG 239 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ + +R +IF NTK E + L A+ +++GDV Q+KR++IL +F G L I Sbjct: 240 LLRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLPI 299 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 ++ATDVA+RG+HI V+HV NYDLP DCEDYVHRIGRT RAGA G +IS A E+ A + Sbjct: 300 MIATDVASRGIHIEGVSHVINYDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYIE 359 Query: 370 AIETYIGHSIPVSKYNPDALMTDLP--KPLRLTRPRTGNGPRRTGAPRNRRRSG 421 IE +I IP D + D KP RPRT R G P +R RSG Sbjct: 360 PIEDFIKQKIPTEWAEDDMFVHDYKRTKP----RPRTELPHGRGGKPGDRGRSG 409 >UniRef50_A3JG19 ATP-dependent RNA helicase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JG19_9ALTE Length = 463 Score = 365 bits (938), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 193/423 (45%), Positives = 272/423 (64%), Gaps = 6/423 (1%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 ++H ++ +FSD L ++ +A+ GF CTPIQA LP TLA +D+ GQAQTGTGKT A Sbjct: 36 RSHTSDLRFSDLNLDHRLQQAIAAIGFEYCTPIQAETLPWTLACQDLIGQAQTGTGKTAA 95 Query: 63 FLTSTFHYLLSHPAIADRK--VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 FL + +L P I D K ++PR L +APTRELA+QI DAE L TG K+ G Sbjct: 96 FLITAIQTMLETP-IEDSKRFASEPRVLALAPTRELAMQIAKDAEQLCAHTGHKVVTVVG 154 Query: 121 GDGYDKQLKVLESGV-DILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 G YDKQ L++ V DIL+ T GRLID+ + L I +++LDEADRM D+GFI D+ Sbjct: 155 GMHYDKQRDQLQNEVVDILVATPGRLIDFLGSQDVFLDQIDILILDEADRMLDMGFIPDV 214 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + R+ P R +LFSAT + V LA +AE++E+EPEQKT R+++ ++ Sbjct: 215 KRIIRKCTPKEDRQTLLFSATFNQDVLNLASMWTQSAEFVEIEPEQKTAERVEQTVYLVG 274 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 ++EK+R+L ++ D+A++FAN + +C ++ L G V L++G++AQ KRL+ L Sbjct: 275 DDEKLRVLVNYLKRPEVDKALVFANRRDQCRDLEEDLRNQGVSVSLMSGEIAQAKRLKTL 334 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 ++F G + +LVATDVA RG+H+ VTHVFNY+LPD+ EDYVHRIGRTGRAG++G SIS Sbjct: 335 EQFKAGSIQVLVATDVAGRGIHVNGVTHVFNYNLPDNAEDYVHRIGRTGRAGSTGVSISF 394 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPK-PLRLTRPRTGNGPRRTGAPRNRR 418 A E+ + LPAIE YIG + ++ +ALM + P+ R R G R TG + Sbjct: 395 AGEDDSFALPAIEKYIGQKL-ANEVPDEALMVPMDNAPIARKRGRRPQGTRPTGNRSSGN 453 Query: 419 RSG 421 RSG Sbjct: 454 RSG 456 >UniRef50_A0LLL9 DEAD/DEAH box helicase domain protein n=2 Tax=Deltaproteobacteria RepID=A0LLL9_SYNFM Length = 533 Score = 335 bits (859), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 183/419 (43%), Positives = 256/419 (61%), Gaps = 9/419 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F D L ++ + F CTPIQA LP TL G D AG+AQTGTGKT F+ + Sbjct: 117 RFHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLDAAGRAQTGTGKTAVFIITMLT 176 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L +PA R+ PRAL++APTRELA+QI + L+ T K +GG Y+KQ + Sbjct: 177 QFLRNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPFKSVAIFGGMDYEKQKR 236 Query: 130 VLESGV-DILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L V DI++ T GRL+D+ +Q ++L ++++V+DEADRM D+GFI D++ + PP Sbjct: 237 RLTGEVIDIVVATPGRLLDFKRQGDLHLSKVEILVIDEADRMLDMGFIPDVQRIIHYTPP 296 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 QR MLFSATL+ V A + N +E+EPEQ + + + + +EK LL Sbjct: 297 KAQRQTMLFSATLTAEVTRFASQWTRNPVTVEIEPEQVAVDTVNQRVLITTIDEKFTLLF 356 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +I + DR I+F N + + + L + G LL+G+V QKKR++ L+EF G + Sbjct: 357 NMITRQNLDRVIVFTNRRDQARRLTERLGSYGISCALLSGEVDQKKRVKTLEEFRNGKIR 416 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGLH+ AV+HVFNY++P D EDYVHRIGRTGRAG SG S+S A E+ + + Sbjct: 417 VLVATDVAARGLHVEAVSHVFNYNMPMDPEDYVHRIGRTGRAGTSGISVSFASEDDSFLI 476 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPK----PLRLTRPRTGNGPRRTGAPRN--RRRSG 421 PA+E Y+GH I + D L T LP+ P+ RPR +GP R PR+ RR++G Sbjct: 477 PALEKYLGHEIHCEHPDEDMLET-LPEPTHTPVAAERPRR-SGPYRGRNPRSTGRRKTG 533 >UniRef50_Q88NB7 ATP-dependent RNA helicase rhlB n=50 Tax=Gammaproteobacteria RepID=RHLB_PSEPK Length = 398 Score = 335 bits (858), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 175/387 (45%), Positives = 242/387 (62%), Gaps = 2/387 (0%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F DF L +++ A+ GF CTPIQA L TL G+D G+AQTGTGKT AFL S Sbjct: 10 RFHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIIS 69 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L P +R + +PRALI+APTREL VQI DA L + TGL + GG +DKQLK Sbjct: 70 QLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLK 129 Query: 130 VLES-GVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 LE+ DIL+ T GRL+D+ ++ ++L ++V+VLDEADRM D+GFI +R + R+ PP Sbjct: 130 ALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPP 189 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 ++R +LFSAT + V LA + N +E+EPE +++ ++ + +K +LL Sbjct: 190 KSERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLY 249 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ + +R ++FAN K I L DG L+GDV Q KR+R L+ F G + Sbjct: 250 NLVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRIT 309 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVA RG+HI ++HV N+ LP+D +DYVHRIGRTGRAG SG SIS A E+ + L Sbjct: 310 VLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQL 369 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPK 395 PAIE +G I + PD L+ +P+ Sbjct: 370 PAIEALLGRKIK-CEMPPDELLKPVPR 395 >UniRef50_D1NAH8 DEAD/DEAH box helicase domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAH8_9BACT Length = 542 Score = 330 bits (846), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 175/388 (45%), Positives = 244/388 (62%), Gaps = 3/388 (0%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F D LH V ++ GF CTPIQAL LP L GRD+AG+AQTGTGKT AFL + F Sbjct: 126 RFLDLPLHEDVQFGIQHAGFEYCTPIQALTLPALLEGRDLAGKAQTGTGKTAAFLLAVFT 185 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 LL+HP + +RK PRAL++APTRELA+QI DAE L TGL + +GG ++KQ + Sbjct: 186 RLLNHP-LEERKPGCPRALVLAPTRELAMQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRR 244 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE VD++IGT GR+IDY++ + L ++V+V+DEADRM D+GFI D++ + ++P Sbjct: 245 SLEQPVDLVIGTPGRIIDYSRGGSLKLSKVEVLVIDEADRMLDMGFIPDVKRIVSQLPRK 304 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSATL + LA + +E EPE+ I++ + +EK+ LL Sbjct: 305 GERQTLLFSATLEDHILRLASGWLAEPVIVESEPEKMVSENIEQTFYSVLRDEKLALLLY 364 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++ E DR +IF N K + LA G+ V +L+GD+ Q+KR+++L+ F G I Sbjct: 365 ILRTEPYDRVLIFGNRKDVNLRLQYDLARFGYEVPVLSGDIPQEKRIKVLERFRAGTEKI 424 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 ++ATDVAARG+H+ V+ V NYDLP+ EDYVHRIGRTGRAG +G SIS CE A LP Sbjct: 425 VIATDVAARGIHVDDVSLVINYDLPERAEDYVHRIGRTGRAGHNGKSISFLCEYGAYYLP 484 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPL 397 IE + + P M +P+P+ Sbjct: 485 DIEKLL--DVQFHSTQPTEDMLKMPEPV 510 >UniRef50_A6V0P4 ATP-dependent RNA helicase RhlB n=15 Tax=Pseudomonadaceae RepID=A6V0P4_PSEA7 Length = 529 Score = 329 bits (843), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 174/387 (44%), Positives = 240/387 (62%), Gaps = 2/387 (0%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F DF L P ++ A+ GF CTPIQA L TL G+D G+AQTGTGKT AFL S Sbjct: 142 RFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIIT 201 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 LL P +R + +PRALI+APTREL VQI DA L + TGL + GG +DKQLK Sbjct: 202 QLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLK 261 Query: 130 VLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 LE+ DIL+ T GRL+D+ ++ ++L ++V+VLDEADRM D+GFI +R + R+ P Sbjct: 262 QLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPH 321 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSAT + V LA + + +E+EPE +++ ++ + +K +LL Sbjct: 322 KGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLY 381 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ + +R ++FAN K I L DG ++GDV Q KR+R L+ F G + Sbjct: 382 NLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIR 441 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVA RG+HI ++HV N+ LP+D +DYVHRIGRTGRAGASG SIS A E+ A L Sbjct: 442 VLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFAL 501 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPK 395 P IE +G I + P L+ +P+ Sbjct: 502 PPIEELLGRKI-TCEMPPAELLKPVPR 527 >UniRef50_A6DML6 ATP-dependent RNA helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DML6_9BACT Length = 542 Score = 321 bits (822), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 179/420 (42%), Positives = 254/420 (60%), Gaps = 12/420 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L P V A+ + F CTP+Q LP++L G+DVA +AQTGTGKT AFL S +++ Sbjct: 117 FLSMDLCPAVQRAIHEMDFKFCTPVQEGVLPISLKGQDVAAKAQTGTGKTAAFLISMYNH 176 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +++P + K PRALI+APTRELA+QI ADAE L + +++ +GG +DKQ ++ Sbjct: 177 FVNNPQ-TEVKAGTPRALILAPTRELALQIGADAEGLGKYCDIRVETFFGGMDFDKQAQI 235 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L VDI + T GRL+DY ++ INL ++ + +DEADRM D+GFI D+R + +P + Sbjct: 236 LRGRVDIAVATPGRLMDYHRRKMINLREVEFLCIDEADRMLDMGFIPDVRKIVGYLPGRD 295 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNA-EYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R+ L+SATL+ V LA +N E +E+ PE + ++++ + +K ++ Sbjct: 296 KRITQLYSATLNQSVLNLAASWLNEKYEKVEINPETIVSKNVDQKVYTVTANQKENVILW 355 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADG-HRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ E R IIFAN K CE + L G ++ LLTGDV QKKR+RIL+EF G + Sbjct: 356 HLKNEEVKRMIIFANRKFDCERLADKLYQYGVDKLELLTGDVPQKKRMRILEEFRSGKVQ 415 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVA RG+H+ V+HV NY+LP + EDYVHR+GRTGRA A G +IS A E L Sbjct: 416 VLVATDVAGRGIHVDDVSHVVNYELPYEPEDYVHRVGRTGRASALGKAISFADENSGFEL 475 Query: 369 PAIETYIGHSIPVSKYNPDALMTD----LPKPLRLTRPRTGN---GPRRTGAPRNRRRSG 421 P IE YI +P P MTD + + R GN G R G R++ R+G Sbjct: 476 PEIECYIEMQLPAEV--PLEGMTDDHDKKHSERKFAQKRGGNKHSGNRNKGGSRHQERNG 533 >UniRef50_Q1QAQ0 DEAD/DEAH box helicase-like n=5 Tax=Gammaproteobacteria RepID=Q1QAQ0_PSYCK Length = 384 Score = 320 bits (821), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 169/379 (44%), Positives = 233/379 (61%), Gaps = 4/379 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L + A+ GF TPIQA LP TLA +D GQAQTGTGKT FL + Sbjct: 7 FTDLPLSAATLRAVSDLGFTELTPIQAKILPHTLANQDAIGQAQTGTGKTATFLLTIMEA 66 Query: 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LL P AD R + +PRA++MAPTRELA QI D L + T L GG Y+ Q Sbjct: 67 LLKRPFAADEERHLGEPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGTNYETQQ 126 Query: 129 KVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 LE VDILI T GRLID + + L ++V+VLDEADRM D+GFI DI+ L RMP Sbjct: 127 HELERQYVDILIATPGRLIDLMHKGMVYLDRVEVLVLDEADRMLDMGFIPDIKRLVGRMP 186 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 P R ++LFSAT + V LA+ ++ E++E+EPE KT + + + + ++K+ + Sbjct: 187 PNTDRQSLLFSATFNQDVMGLAYRWLHEPEFVEIEPEHKTSELVDQHFYLLTEDQKLEAV 246 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + +I + ++ IIFAN K + + ++ H GH++ +L+GDV Q+KR + L F G Sbjct: 247 ERIITDSTVEKVIIFANRKDQVKRLY-HKLRQGHKIVMLSGDVIQQKREKYLQRFKDGHA 305 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVA RG+H+ V+HV NY LPD +DYVHRIGRTGRAG +G SIS E+ A N Sbjct: 306 SVLVATDVAGRGIHVDDVSHVINYTLPDQPDDYVHRIGRTGRAGQTGISISFVSEDDAFN 365 Query: 368 LPAIETYIGHSIPVSKYNP 386 +PA+E ++ + ++ P Sbjct: 366 IPALEKHLDTKFKLEQWQP 384 >UniRef50_Q1N6E2 ATP-dependent RNA helicase n=1 Tax=Bermanella marisrubri RepID=Q1N6E2_9GAMM Length = 475 Score = 320 bits (819), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 167/376 (44%), Positives = 237/376 (63%), Gaps = 2/376 (0%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F DF L +++ +++ GF +PIQA ALP TLAGRD+ G+AQTGTGKT AFL + Sbjct: 99 RFHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQ 158 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 LL+ +R ++PRALI+APTRELA+QI DA+ L++ L + GG YDKQ + Sbjct: 159 KLLTVKP-EERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVDYDKQKE 217 Query: 130 VLESGV-DILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 LE+ V D+++ T GRL+DY +Q + L ++++V+DEADRM D+GFI D++ + R P Sbjct: 218 QLENEVVDVVVATPGRLLDYLQQGIVYLDQVEMLVIDEADRMLDMGFIPDLKRIIRGTPE 277 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + R LFSAT Y V L+ E +E+EPE +K++ +K L Sbjct: 278 KSIRQTQLFSATYPYDVVALSESWTYKPEQVEIEPESVATETVKQQFISLQETQKDNALI 337 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +E+E ++IIFAN + C ++ L G + LL+G+VAQ KR++ LD F D Sbjct: 338 EYLEKENTGKSIIFANRRDTCRDLADRLNKRGVKALLLSGEVAQAKRMKTLDRFKSEDGA 397 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVA RG+H+ +THVFNY+LPDD EDYVHRIGRTGRAG SG +I+ E A L Sbjct: 398 VLVATDVAGRGIHVDGITHVFNYNLPDDPEDYVHRIGRTGRAGESGTAITFIDEYEAYGL 457 Query: 369 PAIETYIGHSIPVSKY 384 +E+Y+G + +Y Sbjct: 458 MDLESYLGKKVSTDQY 473 >UniRef50_C0QD57 RecQ2 n=3 Tax=Desulfobacterales RepID=C0QD57_DESAH Length = 537 Score = 315 bits (807), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 167/406 (41%), Positives = 241/406 (59%), Gaps = 2/406 (0%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T + +F D L ++ A+ + F C P+QA LP TL G+D +AQTGTGK+ AF Sbjct: 91 TQEGKTRFHDLDLPLGLMHAISDENFQYCMPVQAEVLPHTLMGKDATAKAQTGTGKSAAF 150 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 L + L+ +P R+ PRALI+ PTREL +QI DA+ L T L+ +GG Sbjct: 151 LVTIIARLMKNPTRGKREKGTPRALIIEPTRELVLQIEKDAKALTLYTPLRTVSVFGGMD 210 Query: 124 YDKQLKVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y +Q L S VDI+ T GRL+D+ +Q INLG I+++V+DEADR+ D+GFI D+R + Sbjct: 211 YKRQQDQLASAHVDIIAATPGRLMDFMRQKLINLGKIEILVIDEADRLLDMGFIPDMRNI 270 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 P +R + FSATL+ + +A + + +E++P++ I +++F + ++ Sbjct: 271 IYNTPHKKERQTLFFSATLAPEILRMANQWTVDPAVVEIDPDKTAADSINQKVFIVTEDQ 330 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K LL LI E +R I+F N + I L +L+G+V+QK+R+R LD+F Sbjct: 331 KFPLLYNLISGEKLERVILFVNMRSTTRRIAQRLVQFDISSEILSGEVSQKQRIRTLDDF 390 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G + +LVATDVAARGLHI V+HV NYDLP D E Y+HRIGRTGRAGA G S+S A E Sbjct: 391 RNGKVRVLVATDVAARGLHIEGVSHVINYDLPQDPEHYIHRIGRTGRAGAEGISVSFADE 450 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGP 408 + +P IE +G+ + +Y DA++ LPKP R P+ P Sbjct: 451 MSSFQIPDIEAVLGNKL-ECEYPDDAMLAPLPKPKRRIPPKPDTRP 495 >UniRef50_C8PPF9 ATP-dependent RNA helicase DbpA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PPF9_9SPIO Length = 605 Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 162/371 (43%), Positives = 228/371 (61%), Gaps = 5/371 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS+F L +++ LE+ G+ CTP+Q + G D+ Q+QTGTGKT A+L + Sbjct: 14 FSNFNLDSHLLQGLEEAGYIECTPVQEQVFSAGMDGSDLYVQSQTGTGKTAAYLVTLMQR 73 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +L+ + R ALI+ PTRELAVQ+ +A L + TGL+ YGG GY +Q + Sbjct: 74 MLAQGTESRRP-----ALILVPTRELAVQVEEEAHKLGKYTGLRAASFYGGVGYQQQEEA 128 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L++GVD++IGT GR+ID K + L + +V+DEADRM+D+GF D+R L + A Sbjct: 129 LKNGVDLIIGTPGRVIDLEKSKTMKLKHVGFLVIDEADRMFDMGFYPDLRSLLSVLSKAE 188 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R MLFSATL+ V+ LA+E +A+ I ++ + T I ++LF+ + ++KM LL + Sbjct: 189 ERQTMLFSATLNTWVKNLAWEYTIDAKEITIDADNVTVDEINQKLFHVAADQKMSLLLGI 248 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E P+ IIF NTK E + L +G+ L GD+ Q KRL I+D F G L L Sbjct: 249 LRNEKPENTIIFCNTKKTTEIVAKRLRINGYATEFLIGDLPQPKRLHIIDSFKAGKLTCL 308 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARG+ I + V NYDLP++ E+YVHRIGRT RAG +G + SL E+ NLP Sbjct: 309 VATDVAARGIDINDLAMVINYDLPNEAENYVHRIGRTARAGKTGAAYSLCSEQDVYNLPD 368 Query: 371 IETYIGHSIPV 381 IE YI IPV Sbjct: 369 IEKYIEAKIPV 379 >UniRef50_Q6APU7 Related to ATP-dependent RNA helicase (RhlE) n=1 Tax=Desulfotalea psychrophila RepID=Q6APU7_DESPS Length = 498 Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 167/393 (42%), Positives = 235/393 (59%), Gaps = 11/393 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 +++F DFA+ ++ + F CTPIQ +L LAG+D+ G+A TGTGKT FL Sbjct: 93 KKRFHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGV 152 Query: 68 FHYLLSHPAIADRK----VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 LL AD+K PRALI+APTREL +QI DA+ L TG+ YGG Sbjct: 153 MARLL-----ADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAE 207 Query: 124 YDKQLKVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y+KQ+++L+ G DI++ T GRLID+ + +N Q +V+DEADRM D+GFI D+R + Sbjct: 208 YEKQMELLKRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLDMGFIPDVRRI 267 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 MP R ++FSAT+S V L+ + + E +E E +Q T ++++++ + EE Sbjct: 268 VSWMPKKRDRQTLMFSATISSDVNNLSAQWCVDPEVVEAEADQVTTDTVEQKVYLVTAEE 327 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K +L LI+E +R +IFAN K ++ L + LL+GDV Q KR L+ F Sbjct: 328 KYNVLYNLIKENSDERIMIFANMKSETRKLADRLKRNSIDCLLLSGDVPQNKRQSRLESF 387 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G + +LVATDVA RG+HI +++V NY LP + EDYVHRIGRTGRAG +G S+S ACE Sbjct: 388 RTGKVKVLVATDVAGRGIHIDGISYVVNYTLPYEPEDYVHRIGRTGRAGLAGKSVSFACE 447 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPK 395 E + LP IE YIG + P+ L+ PK Sbjct: 448 EGSFYLPDIEEYIGAKLDCV-LPPEELLVHAPK 479 >UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LND0_DESBD Length = 545 Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 168/405 (41%), Positives = 236/405 (58%), Gaps = 9/405 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L ++++A++ KG+ T IQA A+P+ LAGRD+ +AQTGTGKT AF Sbjct: 3 FDQLGLRVELLKAIKNKGYEAPTAIQAQAIPVILAGRDILARAQTGTGKTDAFGLPIVQI 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L + + PRALI+ PTRELA+Q+ + A L+ +A+GG + Q+ Sbjct: 63 L----GLTRGNGHHPRALILTPTRELALQVGESIKAYARKVSLRCTVAFGGVRIEPQIAR 118 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 LE G+DIL+ T GRL+D A Q H++L +I+ +V DEADRM DLGF +I + +P Sbjct: 119 LERGIDILVATPGRLLDLASQEHLSLASIEFLVFDEADRMLDLGFSGEINAILDLLPTV- 177 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R MLFSAT + +++ LA + ++ EYIE+ P+ +++++ + + + K+ LL L Sbjct: 178 -RRTMLFSATYTPQIKALAAKMLDKPEYIEITPDTAAAEAVQQKVHHVNKDNKLPLLLHL 236 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 IE++ DR ++FA T+ + LAA G V L G +Q R R L+EF G + IL Sbjct: 237 IEKQKQDRILVFARTRTWANRLTDKLAAHGISVAALHGSKSQSLRKRTLEEFKDGKIHIL 296 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL I + V NYD+P+ EDYVHRIGRTGRAG SG ++SL E L A Sbjct: 297 VATDVAARGLDISNLPLVVNYDIPNSPEDYVHRIGRTGRAGVSGIAVSLVSPEERNLLLA 356 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 IE + H IPV +D+P L RP GN APR Sbjct: 357 IEDLLRHQIPVEAVKGFTEDSDVPD-FVLYRP--GNPKSERNAPR 398 >UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SI45_9CAUL Length = 605 Score = 286 bits (733), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 158/371 (42%), Positives = 218/371 (58%), Gaps = 6/371 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L ++ LEK+G+H TPIQA A+P+ L D+ G AQTGTGKT AF H+ Sbjct: 4 FKDLGLSASLLSTLEKEGYHTPTPIQAQAIPILLNKHDLLGIAQTGTGKTAAFALPILHH 63 Query: 71 LLSHPAI-ADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 +LS+ I A R R L+++PTRELA QI + ++ GL++ +GG Y Q K Sbjct: 64 ILSNRIIPAPRSC---RVLVLSPTRELATQIADSFKAYSKGLGLQIATIFGGVKYGPQYK 120 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ G+DIL+ T GRLID+ +Q I+L A++ +VLDEAD+M D+GFIK IR + R+P Sbjct: 121 ALQGGIDILVATPGRLIDHIEQKTIDLKAVEHLVLDEADQMLDMGFIKPIRQVASRLPA- 179 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 QR N+ FSAT+ + LA E + N + +E+ PE T R+ +++ + + K LL Sbjct: 180 -QRQNLFFSATMPKEIAGLANELLTNPKKVEITPEATTAERVTQQVIFIEQQRKRALLSE 238 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L +E R +IF TK + + +L A G + GD Q +R R L F G + Sbjct: 239 LYADEKLARTLIFTRTKRGADRVAAYLQAGGVEAAAIHGDKNQSQRERALQAFKAGRVRA 298 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATD+AARG+ + VTHV NY+LP E YVHRIGRT RAG GHSI+L ++ L Sbjct: 299 LVATDIAARGIDVDNVTHVINYELPFVAEAYVHRIGRTARAGKEGHSITLVADDERKLLK 358 Query: 370 AIETYIGHSIP 380 IE IP Sbjct: 359 DIERITRQRIP 369 >UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWU0_9PLAN Length = 598 Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 158/379 (41%), Positives = 217/379 (57%), Gaps = 2/379 (0%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L +V AL + T IQ A+P +AGRD+ G AQTGTGKT AF Sbjct: 3 FEDLGLAEPLVRALNAANYTEPTAIQLQAIPPAIAGRDLQGCAQTGTGKTAAFALPLLDR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+ +P + PRAL+++PTRELA QIH YGG Q+K Sbjct: 63 LIKNPRQGKLRGRLPRALVLSPTRELAGQIHDSVRRYGRHAMQNSLTIYGGVSQVPQVKG 122 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L +G D+LI T GRL D +Q +INL I+V VLDEADRM D+GF+ DIR + ++P Sbjct: 123 LNAGQDVLIATPGRLCDLMQQGYINLSEIEVFVLDEADRMLDMGFMPDIRRIIAKLP--Q 180 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q+ +LFSAT+ +++LA + +++ I +EPE+ T I + L+Y + K LL ++ Sbjct: 181 QKQTLLFSATMPPEIQKLASQLLHDPVEINIEPERATADGITQSLYYVPTKHKPELLASV 240 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ E RA++F TKH C + L G +V + G+ +Q R R L F G + +L Sbjct: 241 LKREEVTRAVVFVRTKHGCNKAALQLEKTGLKVDAIHGNKSQSARQRTLYAFKNGHIQVL 300 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL + V+HV NYDLP + E YVHRIGRTGRAG SG +IS +E L Sbjct: 301 VATDVAARGLDVTGVSHVINYDLPMEPETYVHRIGRTGRAGKSGIAISFCDDEQRGLLRD 360 Query: 371 IETYIGHSIPVSKYNPDAL 389 ++ +G IPV PD + Sbjct: 361 VQRILGKKIPVENEMPDGI 379 >UniRef50_A6VX62 DEAD/DEAH box helicase domain protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VX62_MARMS Length = 452 Score = 283 bits (725), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 159/371 (42%), Positives = 222/371 (59%), Gaps = 1/371 (0%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F D L +V++++ + GF C+ IQA LP+TL G D+ GQAQTGTGKT AFL + Sbjct: 72 RFHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLGYDIIGQAQTGTGKTAAFLIAMIS 131 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L +P R N R LI+APTRELA+QI +A L L + GG Y+KQ Sbjct: 132 DFLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKLTSNCHLNVVTLVGGLSYEKQKI 191 Query: 130 VLES-GVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 LE+ VDIL+ T GRL+D+A+ + LG ++ +VLDEADRM +GFI D++ + R P Sbjct: 192 ALETENVDILVATPGRLLDFARSRKVQLGKVECLVLDEADRMLSMGFIPDVKSIIRMTPH 251 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R MLFSAT ++ LA + + + V P++ T I + ++ ++K +LQ Sbjct: 252 KETRQTMLFSATFPKDIQALAQQWTYFPKEVSVVPKEATNQNIDQVIYTVEADQKWPVLQ 311 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LIE+ R IIFAN + +++ L +L+G+VAQ KR++ L F G + Sbjct: 312 QLIEKNGGQRTIIFANRRDETRDLYERLRKANINCAILSGEVAQDKRVKTLANFKEGIIQ 371 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVA RG+H+ V V NY LP+D EDYVHRIGRTGR G +G S+S A E+ A + Sbjct: 372 VLVATDVAGRGIHVDNVELVVNYSLPEDPEDYVHRIGRTGRGGETGKSVSFASEDDAFMI 431 Query: 369 PAIETYIGHSI 379 P IE +G SI Sbjct: 432 PEIERVVGESI 442 >UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G990_9FIRM Length = 538 Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 153/414 (36%), Positives = 236/414 (57%), Gaps = 12/414 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KFS+F L ++ A+ K G+ TP+Q ++P+ L GRD+ G AQTGTGKT AF H Sbjct: 63 KFSEFGLKKDLLSAIRKAGYEEPTPVQEESIPVILEGRDMIGCAQTGTGKTAAFALPVLH 122 Query: 70 YL--LSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L L P + RAL++ PTRELA+QI + + L+ YGG Q Sbjct: 123 KLTLLKRPRV--------RALVLTPTRELAIQIFDNFKKYGRYLHLRTVCLYGGAKRGPQ 174 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L G DIL+ T GRL+D+ Q+ ++L +++++VLDEADRM D+GF+ D+ + P Sbjct: 175 IGALRRGADILVATPGRLLDFMGQDLVDLSSVEILVLDEADRMLDMGFLPDVSRIVESTP 234 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 ++R ++FSAT+ VR+LA + + ++V PE + ++++L + S E+K ++ Sbjct: 235 --SKRQTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEAADTVEQKLIFSSREDKREII 292 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +L+ +E + AI+F TKH +++ L G + GD Q +R L+ F G + Sbjct: 293 ASLLTDEAVESAIVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQRQDALNRFKSGKV 352 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ++VATDVAARGL IP ++HVFNYD+P++ Y+HRIGRTGRAG SG +I+L CE Sbjct: 353 RVMVATDVAARGLDIPKLSHVFNYDVPEEAGAYIHRIGRTGRAGESGIAITLCCEAELDA 412 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 L +E + IP + + + + R R G R+G +N +SG Sbjct: 413 LREVEELLEKPIPELQTQWSLPLERKARKGKGGRTRHGRSGYRSGGQKNAGKSG 466 >UniRef50_Q6MHS8 ATP-dependent RNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHS8_BDEBA Length = 549 Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 153/405 (37%), Positives = 238/405 (58%), Gaps = 20/405 (4%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KFS+ L +++ A++K + +CTPIQ A+P L G+DVAG AQTGTGKT AF+ Sbjct: 2 KFSELNLDSQLLSAIQKLNYDDCTPIQEQAIPPVLDGKDVAGLAQTGTGKTAAFVIPVME 61 Query: 70 YLLSHPAIADRKVNQPRALI----------------MAPTRELAVQIHADAEPLAEATGL 113 +L I + +ALI + PTRELA Q+ + L+ +GL Sbjct: 62 RILRARPIQGEVTEEQKALIEKRAYKDWKPQNFVLILVPTRELAEQVQDNINKLSVDSGL 121 Query: 114 KLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDL 173 + YGG GYDKQ + L++GV+ ++ T GRLID K++ ++L ++ +V DEADRM+D+ Sbjct: 122 RGFAIYGGTGYDKQKEALKNGVEFIVATPGRLIDLYKEHLVDLKQVRAIVFDEADRMFDM 181 Query: 174 GFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKE 233 GF D++++ +R+P +R ++FSATL++ V ++ + I + +Q +K+ Sbjct: 182 GFKDDMKYILQRVP--RERQLLVFSATLNFDVLNTIYQFGSEPVEINISRDQAKADNVKD 239 Query: 234 ELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQK 293 ++F+ ++EK + L +L++ P +AIIF N K E I L +G ++ + Q Sbjct: 240 QIFHVGSDEKPQHLLSLLKVHNPKQAIIFTNFKMSVERIAKFLVENGVPAMAISSLLTQA 299 Query: 294 KRLRILDEF-TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGA 352 +R R++++F D+++LVATDVAARGL I V V NY+LP D E YVHRIGRTGRAG Sbjct: 300 QRNRVIEQFKAENDMNVLVATDVAARGLDIKGVDMVVNYELPMDSESYVHRIGRTGRAGT 359 Query: 353 SGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPL 397 +G + SL ++ +L IE Y+ H I + D L+ D KP+ Sbjct: 360 TGQAFSLVGDKDIESLGRIEDYLKHKIEIGYLENDQLLKDF-KPM 403 >UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eggerthella lenta DSM 2243 RepID=C8WL27_EGGLE Length = 508 Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 152/373 (40%), Positives = 213/373 (57%), Gaps = 6/373 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 Q F+D L + A+E+ G+ N TP+Q A+PL L GRD+ A TGTGKT AFL Sbjct: 2 QNFADLGLSEAALAAVERLGYENPTPVQLQAIPLVLEGRDLIAAASTGTGKTAAFLLP-- 59 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 +LS R PR L+++PTRELA QI + TG + +GG Y Q+ Sbjct: 60 --ILSTLPRGKRGKRAPRVLVVSPTRELAQQISQTCMQITRKTGHYVTTVFGGTPYGPQI 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + G D+LI T GRL D + ++LG I+ +VLDEADRM D+GF+ + + P Sbjct: 118 NEIRRGTDVLIATPGRLNDLMNKGVVDLGGIKSLVLDEADRMLDMGFLPAVTTIVDATPA 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 Q L LFSAT+ + +++ +N+ +E+ +T +++ + +N +K LLQ Sbjct: 178 DRQTL--LFSATIDHSIQKNLGSLLNDPAVVEIARNGETAQTVEQFMMPIANFKKPELLQ 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+EE+ DR I+FA TK+R E+ L G+R + D +Q +R R LD F RG Sbjct: 236 ALLEEKGSDRVIVFARTKNRTEDCAEALCDAGYRAESIHSDKSQGQRKRALDNFRRGRTS 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDV ARG+ +P V HV N+DLPD EDYVHRIGRTGRAG G ++S E + Sbjct: 296 ILVATDVLARGIDVPDVDHVINFDLPDMPEDYVHRIGRTGRAGEQGFAVSFVTRESRRTM 355 Query: 369 PAIETYIGHSIPV 381 IE IG ++P+ Sbjct: 356 SDIEKLIGKNVPL 368 >UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT0_RHORT Length = 799 Score = 277 bits (709), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 162/417 (38%), Positives = 230/417 (55%), Gaps = 26/417 (6%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L P+ + A+E+ G+ TPIQ A+P GRDV G AQTGTGKT +F Sbjct: 3 FADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMIDI 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L S A K PR+LI+APTRELA Q+ + + L + L GG+ ++Q KV Sbjct: 63 LASGKA----KARMPRSLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQKV 118 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ GVD+LI T GRLID ++ I L ++V+V+DEADRM D+GFI D+ + +P Sbjct: 119 LDRGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPKIR 178 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q + FSAT+ +R LA + N + + +EP QK +++ L EK L+ L Sbjct: 179 Q--TLFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQL 236 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E A IF N K + ++ L+ G + L GD+ Q R L++F R ++ ++ Sbjct: 237 LRRETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLM 296 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 V +DVAARG+ + V+HVFN+D+P EDY+HRIGRTGRAG G + +LA E A L A Sbjct: 297 VCSDVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRA 356 Query: 371 IETYIGHSIPVSKYNPD---------------ALMTDLPKPLRLTRPRTGNGPRRTG 412 IE +G +IP PD A+ D +P R + R G RR+G Sbjct: 357 IENLLGKTIP-----PDPQLELSDVAVEDVALAVAEDDRRPKRGGKGRPERGARRSG 408 >UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteobacteria RepID=Q2SZW4_BURTA Length = 571 Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 152/386 (39%), Positives = 224/386 (58%), Gaps = 8/386 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F L +++ A+ ++G+ TPIQA A+P+ L+GRDV G AQTGTGKT +F Sbjct: 103 FDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 162 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 LL + P RALI+ PTRELA Q+ A+ A+ T L+ + +GG + Q+ Sbjct: 163 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMA 222 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV+ILI T GRL+D+ +Q NLG +Q++VLDEADRM D+GF+ D++ + +P Sbjct: 223 ELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLP-- 280 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSAT S +++LA + N + IEV + + ++ + +K + Sbjct: 281 KERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVVK 340 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI + + I+F N+K + + DG + GD +Q +R++ LD F RG+++ Sbjct: 341 LIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIEA 400 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL I + V N+DLP + EDYVHRIGRTGRAGASG ++SL L Sbjct: 401 LVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQLA 460 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPK 395 IE I ++ + + L DLP+ Sbjct: 461 DIEKLIKRTLSL-----ETLELDLPR 481 >UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIB7_CLOPH Length = 514 Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 154/393 (39%), Positives = 224/393 (56%), Gaps = 9/393 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F++ L +++A++++GF +PIQ +PL L GRD+ G AQTGTGKT AF Sbjct: 3 FNEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVLEGRDILGCAQTGTGKTAAFALPILQS 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L + RALI+ PTRELA+QI+ E + T LK + YGG G Q+ Sbjct: 63 LSKGEG------SGVRALIITPTRELAIQIYESFECFGKYTSLKQSVIYGGVGQSLQVNS 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L++G+DILI T GRL D Q +I L AI++ VLDEAD+M D+GF+ DI+ + + +P Sbjct: 117 LKAGIDILIATPGRLNDLIGQGYITLDAIEMFVLDEADQMLDMGFLNDIKKVIKLLPKTR 176 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q L LFSAT+ + LA +NN E I++ P T I++ +++ K+ LL +L Sbjct: 177 QTL--LFSATMPKEIESLATNLLNNPEIIKISPVTSTVDSIEQSVYFVDRLNKISLLTSL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I+E R ++F TKH + + L + + G Q R L +F G + +L Sbjct: 235 IKEHKMSRVLVFTKTKHGADRVADKLNKAKVKTQAIHGGKGQNARQTALSDFKEGKIKVL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ I +++V NYD+P+ E Y+HRIGRTGRAG G++I+L + L Sbjct: 295 VATDIAARGIDISELSYVVNYDIPNQAEIYIHRIGRTGRAGLGGNAINLCNIDDMDYLRE 354 Query: 371 IETYIGHSIP-VSKYNPDALMTDLPKPLRLTRP 402 IE +IG IP V P ++ KP+R RP Sbjct: 355 IEKHIGMVIPEVPSKWPMLILEKTEKPVRGQRP 387 >UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteobacteria RepID=C4XQY7_DESMR Length = 496 Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 157/422 (37%), Positives = 229/422 (54%), Gaps = 22/422 (5%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F F LH ++ +++ G+ TPIQA A+P + G D+ G AQTGTGKT AFL H Sbjct: 2 SFDSFCLHDSLIANIKRAGYETPTPIQAEAVPHVMEGHDLMGLAQTGTGKTAAFLLPILH 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L+++PA + PR LI+APTRELA QI T L+ + YGG G Q++ Sbjct: 62 RLITNPA----RTRSPRTLILAPTRELAEQIFRSTLDFMRGTRLRATVIYGGVGMFPQVR 117 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GVD+++ GRL+D+ Q ++ ++ +VLDEAD M+D+GF+ DI+ + +P Sbjct: 118 ALRQGVDVIVACPGRLLDHLNQGNVRFDGLETLVLDEADHMFDMGFLPDIKRILAALP-- 175 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGH----RIKEELFYP-SNEEKM 244 +R +LFSAT+ + LA E + + + + GH E YP S+ +K Sbjct: 176 AKRQTLLFSATMPPAISGLAAETLTDPVTVRI------GHLAPLSTVEHAIYPVSHNQKA 229 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 LL L+ E + I+F TKHR + + L GH+ L G+++Q++R +D F R Sbjct: 230 PLLLHLLGEAGKESVIVFTRTKHRAKNLAQQLCRSGHKATCLQGNLSQRQRQIAMDGFRR 289 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G ILVATD+AARG+ + V HV N+D+PD E Y HRIGRTGRA G + + E Sbjct: 290 GSFQILVATDIAARGIDVSQVAHVVNFDIPDTAEAYTHRIGRTGRAERDGQAHTFVTGED 349 Query: 365 ALNLPAIETYIGHSIP---VSKYNPDA--LMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 + AIE+++ +P V + P+ P P RPR G G R G +R+R Sbjct: 350 MGMVRAIESHMKKPLPRRNVEGFEPEPGEFRRSAPAPRSAARPRQGYGAPRQGGYGDRQR 409 Query: 420 SG 421 G Sbjct: 410 QG 411 >UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desulfotalea psychrophila RepID=Q6AMK6_DESPS Length = 632 Score = 275 bits (702), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 156/369 (42%), Positives = 216/369 (58%), Gaps = 9/369 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+DF L +V L K GF TPIQ A+PL LAG D+ GQAQTGTGKT AF Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLP---- 112 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 LL++ + + V +AL++APTRELA Q+ + G + + YGG Y Q+ Sbjct: 113 LLNNIDFSKKCV---QALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGG 169 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L G +++GT GRL+D +Q + L ++ +VLDEAD M +GFI DI + + P Sbjct: 170 LRRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTP--K 227 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R MLFSATLS RV +A +++ E I + P+Q G I++ + +N +K+ + + Sbjct: 228 DRQTMLFSATLSSRVMSIANRYLHSPESISISPKQMIGSSIEQRYYLINNSDKIAAITRV 287 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 E E + A+IFA T+ E+ L + G L+GD++Q+ R R+L F +G + +L Sbjct: 288 FEVETVESALIFARTRATVSELANELISRGFAAEGLSGDLSQEARTRVLSRFKKGQIKVL 347 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL I ++HVFNYDLP+D E YVHRIGRTGRAG SG +ISL Sbjct: 348 VATDVAARGLDIDDISHVFNYDLPEDPEVYVHRIGRTGRAGRSGTAISLVTLRDRWMHRR 407 Query: 371 IETYIGHSI 379 IE Y G + Sbjct: 408 IEQYTGKKL 416 >UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepID=Q7UG20_RHOBA Length = 931 Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 147/372 (39%), Positives = 217/372 (58%), Gaps = 10/372 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L +V +A+ G+ TPIQA +P L GRDV Q+QTGTGKT AF Sbjct: 306 FRDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPILSR 365 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQI-HADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + D + +P+ L++APTRELA+Q+ + + A+ +G ++ YGG Y+ QLK Sbjct: 366 V-------DVRSRRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLK 418 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV +++GT GR+ID+ K+ ++LG++ +VLDEAD M ++GF++D++++ + P Sbjct: 419 QLRRGVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEG 478 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q LFSATL +R++A E +N+ I ++ + T +++ + S +K+ L Sbjct: 479 RQ--VALFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFVSPRDKIDALTR 536 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E E D I+F TK + L+ G L GD+ QK R R +D+ RG LD+ Sbjct: 537 ILEVEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQLDV 596 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL +P ++HVFN+DLP D E YVHRIGRTGRAG SG +I L Sbjct: 597 LVATDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLTNAQRRQLR 656 Query: 370 AIETYIGHSIPV 381 IE I + Sbjct: 657 FIENTTKQPIEI 668 >UniRef50_Q04Q15 Superfamily II DNA and RNA helicase n=6 Tax=Leptospira RepID=Q04Q15_LEPBJ Length = 549 Score = 274 bits (700), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 151/382 (39%), Positives = 225/382 (58%), Gaps = 10/382 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF + +LHPK++ A+++ G+ TPIQ ++P L G+D+ G AQTGTGKT+AFL H Sbjct: 2 KFEELSLHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDIIGLAQTGTGKTVAFLIPVVH 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQL 128 +L+ + + + AL++APTREL +QI +A+ L + + G++ GG Y Q Sbjct: 62 TILT------KNIQKVSALVLAPTRELTIQIADEAKKLLKHSDGIRAVPIIGGTDYKSQN 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K LE I++ T GRLID K I++ ++ VLDEADRM D+GFI+DIRWL + Sbjct: 116 KDLEGLNGIIVATPGRLIDMVKSGSIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKC-- 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 N++ +LFSATLS V LA+ +N I++ PE+ RI +++ + EEK+ + Sbjct: 174 KNRKQTLLFSATLSVEVMRLAYRFLNEPVEIQINPEKIITERIDQKIVHLGREEKIPYMT 233 Query: 249 TLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 LI + + IIF N K +I L G + ++ ++ QKKRLR+L +F G Sbjct: 234 NLIVNSKDEGQGIIFTNYKANIPKIVYTLRKYGIPITGISSELDQKKRLRLLRDFKSGKY 293 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +VATDVA+RG+ + + V+NYDLP D E+YVHRIGRT RAG G +I E + Sbjct: 294 RYMVATDVASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRMGKAIGFCSESDYVE 353 Query: 368 LPAIETYIGHSIPVSKYNPDAL 389 L IE Y+ I + + N + + Sbjct: 354 LEKIEKYLKQKIEILEVNEEYI 375 >UniRef50_C5CB97 DNA/RNA helicase, superfamily II n=23 Tax=Bacteria RepID=C5CB97_MICLC Length = 611 Score = 273 bits (699), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 164/401 (40%), Positives = 221/401 (55%), Gaps = 14/401 (3%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 EQ F+DF +HP +VEALE KG + PIQA+ LP+ L G D+ GQA+TGTGKT+ F Sbjct: 36 EQTFADFGVHPAIVEALEAKGIVHPFPIQAMTLPVALGGHDIIGQAKTGTGKTLGFGIPA 95 Query: 68 FHYLLS--HPAI----ADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 + P A P+ALI+APTRELAVQ+ D A L++ YGG Sbjct: 96 LQRAIGPGEPGWDGLEAKGTAGAPQALIVAPTRELAVQVAGDLTAAAARRPLRIATIYGG 155 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y+ Q++ L+ GV+I++GT GRLID +Q H+ L + VVLDEAD M DLGF+ D+ Sbjct: 156 RAYEPQIEELQRGVEIVVGTPGRLIDLMRQRHLRLDLVNTVVLDEADEMLDLGFLPDVET 215 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEV---EPEQKTGHRIKEELFYP 238 L +P Q MLFSAT+ V +A M +I E E T I++ ++ Sbjct: 216 LLAAVPAVRQ--TMLFSATMPGPVVAMARRYMTQPTHIRAADPEDEGLTKKDIRQLVYRA 273 Query: 239 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 + +K L+ ++ E R IIF TK + L A G G L GD+ Q R + Sbjct: 274 HHMDKDELVARALQAEGRGRTIIFTRTKRTAARVADELTARGFAAGALHGDLGQGAREQA 333 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L F G +DILVATDVAARG+ + VTHVFN+ P+D + YVHR+GRTGRAG G +++ Sbjct: 334 LRAFRNGKVDILVATDVAARGIDVDDVTHVFNFQAPEDEKTYVHRVGRTGRAGNKGVAVT 393 Query: 359 LACEEYALNLPAIETY--IGHSIPVSKYNPDA-LMTDLPKP 396 L E I+ +G PV Y+ L +DL P Sbjct: 394 LVDWEDMPRWSLIDKALGLGQPEPVETYSSSPHLFSDLGIP 434 >UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria RepID=Q126W4_POLSJ Length = 579 Score = 273 bits (698), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 152/370 (41%), Positives = 213/370 (57%), Gaps = 3/370 (0%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L P +++A+ ++G+ TPIQA A+P LAG D+ G AQTGTGKT AF Sbjct: 3 FEELKLAPAILKAVLEQGYDTPTPIQAQAIPAVLAGSDLLGGAQTGTGKTAAFTLPMLQR 62 Query: 71 LLSHPAIADRK-VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + P + +R+ VN RALIM PTRELA Q+ + L + +GG G Q+ Sbjct: 63 LSTEPRLTNRRGVNAVRALIMTPTRELAAQVEESVRTYGKYLDLTSMVMFGGVGMGAQID 122 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GVDIL+ T GRL+D+A Q ++L +Q++VLDEADRM D+GFI DI+ + +P Sbjct: 123 KLRRGVDILVATPGRLLDHAGQGTLDLSQVQILVLDEADRMLDMGFIHDIKKVLALVPKH 182 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q L LFSAT S +RELA + + +I+V P T RI + + +K LL Sbjct: 183 KQSL--LFSATFSDEIRELANGLLRDPLHIQVTPRNTTVQRITQTIHPVGRSKKKALLTH 240 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +I E + ++F TK + HL +G L G+ +Q R + L F G + Sbjct: 241 IINEHNWSQVLVFTRTKFGANNVAEHLTKNGIEAMALHGNKSQTARTQALQGFKDGTIRA 300 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATD+AARG+ I + HV NY++P+ EDYVHRIGRTGRAG SG ++SL C + + Sbjct: 301 LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGNSGEAVSLVCLDEEGFMQ 360 Query: 370 AIETYIGHSI 379 IE + +I Sbjct: 361 DIERFTKQNI 370 >UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXV0_BACS4 Length = 500 Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 146/362 (40%), Positives = 213/362 (58%), Gaps = 9/362 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D + P +VEA+EK GF TPIQ +PL G+D+ GQAQTGTGKT+AF Sbjct: 4 FKDLNIQPSIVEAIEKMGFEETTPIQEKVIPLGKEGQDIIGQAQTGTGKTVAFGIPCVEQ 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 ++ P+AL++ PTRELA+Q+ + L + G+K YGG +Q+ Sbjct: 64 VVVEE-------KHPQALVLTPTRELAIQVAEELNKLGQVKGIKALPIYGGQEITRQITA 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ I++ T GR +D+ ++ I +++VVLDEAD M +GFI+DI + + +P Sbjct: 117 LKKRPQIIVATPGRYMDHMRRKTIRPEFLKIVVLDEADEMLSMGFIEDIETILQEVP--G 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +LFSAT+ +++ +A MN I V+ +Q T I++ S +EK L L Sbjct: 175 ERQTLLFSATMPPKLKTIADRFMNKPVSIAVKAKQLTVENIEQRYIALSEKEKFDTLCNL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ E P+ AIIF TK R +E+ L+ G V L GD+ Q++R +++ +F RG +D++ Sbjct: 235 LDMETPELAIIFGRTKRRVDELTESLSIRGFAVEGLHGDMKQERRDQVIRKFKRGSIDVM 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL + V+HV N+DLP D E YVHRIGRTGRAG G S S + +L Sbjct: 295 VATDVAARGLDVNDVSHVINFDLPQDSESYVHRIGRTGRAGKKGISYSFVTHKEKDHLRY 354 Query: 371 IE 372 IE Sbjct: 355 IE 356 >UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box protein A) n=2 Tax=Bacteria RepID=Q11UP8_CYTH3 Length = 580 Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/402 (38%), Positives = 232/402 (57%), Gaps = 27/402 (6%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L P+VVEA+E G+ TPIQ +P+ + G+D+ GQAQTGTGKT AF Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAF------- 55 Query: 71 LLSHPAI--ADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQ 127 PAI D +NQ ++LI+ PTRELA+Q+ + + L++ GL++ YGG+ ++Q Sbjct: 56 --GIPAIEHVDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQ 113 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L++G I++GT GR+ID+ + +N + ++LDEAD M ++GF +DI + R+P Sbjct: 114 IRDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLP 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R +LFSATL+ + LA NN E I++E ++ T +++ + N +K ++ Sbjct: 174 --EERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFYYLVKNSQKTEIV 231 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I+ +IF NTK + EE+ L A GH L GD Q+ R ++ +F +G Sbjct: 232 TQIIDLNNLQLMLIFCNTKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLA 291 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +ILVATDVAARG+ + V V NYD+P D E+YVHRIGRTGRAG G S +L + Sbjct: 292 NILVATDVAARGIDVTGVDAVINYDVPLDIENYVHRIGRTGRAGQLGKSFTLVTSDEKYK 351 Query: 368 LPAIETYIGHSIPVSK---------YNPDAL----MTDLPKP 396 L IE Y +I ++ Y D L T+L KP Sbjct: 352 LRDIERYTKATIEKAETPTRQELVAYKKDKLATRITTELEKP 393 >UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Bulleidia extructa W1219 RepID=D2MPZ3_9FIRM Length = 425 Score = 271 bits (693), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 148/373 (39%), Positives = 213/373 (57%), Gaps = 8/373 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F++F L ++++L K + +PIQ +P+ L G D+ AQTGTGKT F + Sbjct: 3 FNEFNLRKPLLDSLAKASYKKPSPIQEKGIPILLEGSDLIACAQTGTGKTATFALPILN- 61 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +++ K + RALI+ PTRELA QI + + L+ YGG QLK Sbjct: 62 -----SLSKEKNHSIRALILTPTRELATQIFENIKMFGRYMHLRACCVYGGSPAAPQLKA 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 + SG DILI T GRL+DY I+L I+ +VLDEADRM D+GFI D+R + +++P N Sbjct: 117 IRSGCDILIATPGRLLDYLAHGKISLRHIEFLVLDEADRMLDMGFIADVRKIVQQIP--N 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R+ LFSAT+ ++ELA + + N + + +E E+ T I + L Y K ++L L Sbjct: 175 DRITALFSATMPKEIQELARDILKNPKEVRIEAEKFTASTIDQYLIYTEKSSKKKVLVNL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E + I+F TK + + +L ++ GD Q +RL L F + IL Sbjct: 235 LNTESIKKTIVFTRTKIGADRLEKYLKEKEIACLVIHGDKTQGQRLNALQRFRTNQIRIL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 +ATDVAARG+ I ++HV N+DLP+D E+YVHRIGRTGRA G SISL C+E L Sbjct: 295 IATDVAARGIDIKDISHVINFDLPEDIENYVHRIGRTGRAKQEGVSISLVCKEELNLLAN 354 Query: 371 IETYIGHSIPVSK 383 IE+YI IP+ + Sbjct: 355 IESYIQFQIPLKQ 367 >UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=Bacteria RepID=C6XMJ7_HIRBI Length = 769 Score = 271 bits (692), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 149/372 (40%), Positives = 218/372 (58%), Gaps = 4/372 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KFSDF L V++AL+K+G+ TPIQA A+PL + G D+ G AQTGTGKT AF H Sbjct: 3 KFSDFDLASPVLKALDKEGYETPTPIQAQAIPLVMEGGDILGIAQTGTGKTAAFALPLLH 62 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 +L P + R L++APTRELA QI + L++ +GG KQ++ Sbjct: 63 HLCKLPDMPG--PGAVRCLVIAPTRELASQIAEAFSKYGQCLSLRVLKVFGGVPIRKQMR 120 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G D+L+ T GRLID +Q ++L ++ +VLDEAD+M DLGFI +R + +P Sbjct: 121 DLHRGADVLVATPGRLIDLMEQGAVDLSYVEKLVLDEADQMLDLGFIHPLRRIAAAVP-- 178 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R + FSAT+ V LA + + N + + + E T R+ + + + + +K LL Sbjct: 179 KERQTLFFSATMPSNVSGLANQFLTNPKKVSIAQESTTAERVTQTMSHVNQAQKGPLLLV 238 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +++E DRA++F TKH +++ L G R G + G+ +Q +R R L+ F GD + Sbjct: 239 NLQDESIDRALVFTRTKHGADKVVSKLMNAGIRCGAIHGNKSQAQRERALNAFRNGDSKV 298 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATD+AARG+ +P V+HVFNY++P+ E YVHRIGRT RAG G +IS + L Sbjct: 299 LVATDIAARGIDVPGVSHVFNYEIPNVPEQYVHRIGRTARAGREGKAISFVSRDEKKYLL 358 Query: 370 AIETYIGHSIPV 381 I+ I IP+ Sbjct: 359 DIQRQIRMKIPI 370 >UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=Firmicutes RepID=A6TTG0_ALKMQ Length = 549 Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 152/377 (40%), Positives = 220/377 (58%), Gaps = 11/377 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + KF+ + ++ L K TP+Q A+P LA RDV QAQTGTGKT+AF+ Sbjct: 2 KNKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPI 61 Query: 68 FHYL-LSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 + + P I +ALI+ PTRELA+QI A+ + LAE G+ + AYGG ++ Sbjct: 62 LERVNVEKPTI--------QALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQ 113 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 QL+ L+ + I+IGT GRL+D+ ++ INLG + ++VLDEAD+M +GF++D+ + + Sbjct: 114 QLRKLKGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHI 173 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P +R NM FSAT+ +VR LA + M + I+V+ ++ T I++ + ++ K L Sbjct: 174 P--KRRQNMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVTLDEIRQVVIETTDRGKQDL 231 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L L +E P AIIF TK R + L G+ L GD+ Q KR +++ F + Sbjct: 232 LCQLFDEYNPFMAIIFCRTKRRAIALNEALINLGYNSDELHGDLTQAKREKVMKAFKKSK 291 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + LVATDVAARGL I VTH+FNYD+P D E Y+HRIGRTGRAG +G +I+ Sbjct: 292 IQYLVATDVAARGLDIEGVTHIFNYDIPQDGESYIHRIGRTGRAGETGMAITFMTSRDRD 351 Query: 367 NLPAIETYIGHSIPVSK 383 L IE I + V K Sbjct: 352 ELKIIEKVIKMDLDVQK 368 >UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcus RepID=Q3AZR1_SYNS9 Length = 458 Score = 270 bits (691), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 153/372 (41%), Positives = 220/372 (59%), Gaps = 9/372 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L + V ++++ G+ + TPIQAL +P L G+D+ AQTGTGKT AF+ Sbjct: 26 FEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIEL 85 Query: 71 LLSHPAIADR-KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + D+ K Q +L++ PTRELA Q+ A A+ + L+ +GG Q+K Sbjct: 86 LRAE----DKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVK 141 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ GVDIL+ T GRL+D Q I ++V+VLDEADRM D+GFI+DI+ + +P Sbjct: 142 RLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLP-- 199 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLLQ 248 R NM+FSAT S +++LA +N+ I+ + + I E L +P + K+ LL Sbjct: 200 KNRQNMMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAPTI-EHLVHPCDMARKVDLLC 258 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI+ + ++FA TKH +++ L R + G+ +Q R R L+ F GD+ Sbjct: 259 HLIKTNKWKQVLVFARTKHGADKVVKILCHQHMRASAIHGNKSQGARTRALEGFKNGDIK 318 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARG+ I + +V N DLP+ EDYVHRIGRTGRAG +GH+ISL E AL L Sbjct: 319 ILVATDIAARGIDIHQLPYVINLDLPNVAEDYVHRIGRTGRAGEAGHAISLVAAEEALLL 378 Query: 369 PAIETYIGHSIP 380 AIE +IG+ +P Sbjct: 379 KAIEKFIGNPLP 390 >UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Neisseria RepID=A9M0D7_NEIM0 Length = 457 Score = 270 bits (691), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 149/374 (39%), Positives = 217/374 (58%), Gaps = 3/374 (0%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS L ++V AL +G+ N TPIQA A+P LAG D+ AQTGTGKT AF+ + Sbjct: 5 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 64 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + + P R L++ PTRELA QI + + + L+ + +GG DKQ Sbjct: 65 LKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTA 124 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L +G +I++ T GRL+D+ KQ +I+L +++VVLDEADRM D+GFI DIR + + +P Sbjct: 125 DLRAGCEIVVATVGRLLDHVKQKNIHLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLP-- 182 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 QR +LFSAT S +R+LA + MN E +EV + T +++ + +K LL+ Sbjct: 183 RQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLLER 242 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI + ++ I+F TK + + L + GD +Q+ RL L+ F G+L + Sbjct: 243 LIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGNLRV 302 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATD+AARGL I + V NY++P EDYVHRIGRTGRAGA G +ISL E Sbjct: 303 LVATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAISLMDESEQKMFE 362 Query: 370 AIETYIGHSIPVSK 383 +I+ G+ + + + Sbjct: 363 SIKELTGNKLLIER 376 >UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae RepID=C5TNR4_NEIFL Length = 487 Score = 270 bits (690), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 152/374 (40%), Positives = 216/374 (57%), Gaps = 3/374 (0%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS L ++V AL +G+ N TPIQA A+P LAG D+ AQTGTGKT AF+ + Sbjct: 28 FSSLGLGSELVSALTDQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLEL 87 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + + P R L++ PTRELA QI + + + L+ + +GG DKQ Sbjct: 88 LKRYATSSTSPAMHPVRMLVLTPTRELADQIDQNVQAYIKNLPLRHTVLFGGVNMDKQTA 147 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L +G +I++ T GRL+D+ KQ +INL +++VVLDEADRM D+GFI DIR + + +P Sbjct: 148 DLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLP-- 205 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 QR +LFSAT S +R+LA + M+ E +EV + T +++ + +K LL+ Sbjct: 206 KQRQTLLFSATFSPPIRKLAQDFMHTPEMVEVAAQNTTNANVEQHIIAVDALKKRSLLER 265 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI + ++ I+F TK +++ L + GD +Q+ RL L+ F G L + Sbjct: 266 LIVDLHMNQVIVFCKTKQSVDQVTRDLVRRNIAAQSIHGDKSQQSRLETLNAFKEGTLRV 325 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL I + V NY+LP EDYVHRIGRTGRAGA G +ISL + Sbjct: 326 LVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDKTEQKMFE 385 Query: 370 AIETYIGHSIPVSK 383 AI+ G + V + Sbjct: 386 AIKELTGSDLNVER 399 >UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organisms RepID=Q3SF48_THIDA Length = 533 Score = 270 bits (690), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 165/403 (40%), Positives = 229/403 (56%), Gaps = 11/403 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS+ L P +++++ G+ N TP+Q A+P L+G D+ + TG+GKT AFL + Sbjct: 3 FSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSIQR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQLK 129 LL+ PA+ K PR L++ PTRELA+Q+ A E + GG Y QLK Sbjct: 63 LLAEPAV---KSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLK 119 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L VD+++ T GRLID+ ++ I+ ++V+VLDEADRM D+GF+ DI+ + R P Sbjct: 120 RLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPA- 178 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLLQ 248 +R +LFSATL V LA E +A+ IE+E +I++ L + N + K RLL Sbjct: 179 -ERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKEAKIEQRLLFADNMDHKNRLLD 237 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ + +AI+FA+TK EEI LA G L GD+ Q +R R L G Sbjct: 238 ALLRDVEMVQAIVFASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTR 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARG+ + +++HV N+DLP EDYVHRIGRTGRAG +G ++S A + Sbjct: 298 VLVATDVAARGIDVASISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAGMREGGLV 357 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRL--TRPRTGNGPR 409 IE Y G+ I V P T P R RPR GNGPR Sbjct: 358 KNIERYTGNRIEVHTL-PGLEPTQRPSTGRPGNGRPR-GNGPR 398 >UniRef50_B0U160 DEAD-box subfamily ATP-dependent helicase n=18 Tax=Francisella RepID=B0U160_FRAP2 Length = 581 Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 146/371 (39%), Positives = 221/371 (59%), Gaps = 8/371 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T++ FS L+ +++ + K G+ N TPIQ A+P L+GRDV GQAQTGTGKT AF Sbjct: 5 TKKDFSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALP 64 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYD 125 L+++ + R P+ L++APTRELA+Q+ + A+ L + YGG Y Sbjct: 65 ----LINNMDLESRD-RAPQVLVLAPTRELAIQVAEQFQAFAKNIPNLDVACIYGGQEYG 119 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L+ GV +++GTTGR++D+ ++ + L ++ +VLDEAD M +GFI D+R++ Sbjct: 120 SQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVRYVLSH 179 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 + QRL LFSAT+ + ++ E + N I+V+ + KT + + ++ K+ Sbjct: 180 VSDECQRL--LFSATIPTDIADIIQEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKID 237 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L L+E E D IIF TK E+ +L A G+RV + GD+ Q +R I+D+F Sbjct: 238 ALDRLLEVEETDGVIIFVKTKTSTIEVADNLKALGYRVAAINGDMQQSQREYIVDQFRSA 297 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 D+LVATDV ARG+ + ++HV NYD+P+D + YVHRIGRTGRAG G SISL + Sbjct: 298 KSDVLVATDVVARGIDLERISHVINYDMPNDSDTYVHRIGRTGRAGREGISISLVPLKEM 357 Query: 366 LNLPAIETYIG 376 L +E + G Sbjct: 358 RFLRTLERFTG 368 >UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBD4_9SPHN Length = 497 Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 155/376 (41%), Positives = 215/376 (57%), Gaps = 6/376 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 L F+D L P++++A+E G+ T IQA A+P L +D+ G AQTGTGKT +F+ Sbjct: 33 LNRMTFADLGLSPELLKAVEDAGYTEPTAIQAEAIPAVLMMKDLIGIAQTGTGKTASFVL 92 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + A R+ PR+LI+ PTRELA Q+ + E LK+ L GG Sbjct: 93 PMIDVM----AAGRRRALMPRSLILEPTRELAAQVAENFEKYGANHDLKMALLIGGVQMG 148 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 QLK L+ GVD+LI T GRL+D ++ I L +++V+DEADRM D+GFI DI ++ + Sbjct: 149 DQLKTLDEGVDVLIATPGRLMDLFERGKILLNGCELLVIDEADRMLDMGFIPDIEFICDK 208 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P Q MLFSAT+ + +LA + ++N + IE T I +K Sbjct: 209 LPETRQ--TMLFSATMPAPIEKLAKKFLSNPKRIETTRAATTNKDITAFKVPVKARQKRD 266 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ L+ + + AIIFAN K E+ HL G G + GD+ Q RL+ LD F G Sbjct: 267 TLEWLLANDQVETAIIFANRKTTVRELNKHLQRQGFASGEIHGDMDQSSRLKELDRFKSG 326 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 D++ILVA+DVAARGL I V+HVFN+D P +DYVHRIGRTGRAGA G + +L +E A Sbjct: 327 DVNILVASDVAARGLDIKGVSHVFNFDTPWHPDDYVHRIGRTGRAGAKGRAFTLVADEDA 386 Query: 366 LNLPAIETYIGHSIPV 381 + +E G I V Sbjct: 387 EAIANVEKLTGAKIKV 402 >UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Nitrosomonas europaea RepID=Q82T78_NITEU Length = 498 Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 154/414 (37%), Positives = 230/414 (55%), Gaps = 9/414 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ L +++ A+ +G+ N TPIQA +P LAG+DV AQTGTGKT F + Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L ++ + P RALIMAPTRELA+QI + L+ + +GG + Q+ Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIA 126 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L++GV+IL+ T GRL+D +Q +N +++VLDEADRM D+GF+ DI+ + + P Sbjct: 127 ALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSP- 185 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 QR +++FSAT S +R+LA + IE + I + + + K LL Sbjct: 186 -QRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNESISHVIHWVKPDSKFALLLH 244 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI ++ +A+IF TKH + L+ + GD Q++R + L EF GD+ I Sbjct: 245 LIRQQNLKQALIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQALAEFKHGDVQI 304 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARG+ I ++HV NY+LP + EDYVHRIGRTGRAG+ G +ISL E L Sbjct: 305 LVATDVAARGIDIEKLSHVINYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHEKELLA 364 Query: 370 AIETYIGHSI---PVSKYNPDALMTDLP-KPLRLT--RPRTGNGPRRTGAPRNR 417 IE + + ++ ++ + LP + R++ R GN P G+ ++R Sbjct: 365 NIEKLLNAKLETEQIAGFDAEQFARSLPDRKNRMSAGNSRYGNKPMENGSEKSR 418 >UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospirillum sp. Group II RepID=A3EUK2_9BACT Length = 444 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 167/413 (40%), Positives = 234/413 (56%), Gaps = 10/413 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L P+++ AL G + TPIQ ++P + GRD+ G AQTGTGKT FL H Sbjct: 3 FEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLHK 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + A R + RAL+++PTRELA QIH A+ A+ L GG + +Q + Sbjct: 63 I----AEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERN 118 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ DI++ T GRL+D+ ++N++ L +V++DEADRM D+GF+ DI + R++P Sbjct: 119 LKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGR 178 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLLQT 249 Q ++LFSAT R++ELA N+A + VEPE+K I +E S+ +K+ LL+ Sbjct: 179 Q--SLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLLKK 236 Query: 250 LIEEEWPD--RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +++E + + IIF TK E++ L G+ L GD +Q R R+L F RGDL Sbjct: 237 VLDEGKSETGQVIIFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLSRFRRGDL 296 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVAARGL I +THV NYDLP EDYVHRIGRTGRAG +G ++S Sbjct: 297 KVLVATDVAARGLDIDGITHVINYDLPQTAEDYVHRIGRTGRAGRTGRALSFFHPADRDI 356 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 + +IET G IP S ++ L K RP G RT NR R+ Sbjct: 357 VRSIETMAGKPIPHSPHSIPLSEQSLRKTF-TRRPSFGRPQDRTPRGENRFRT 408 >UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=beta proteobacterium KB13 RepID=B6BTD3_9PROT Length = 444 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 147/376 (39%), Positives = 217/376 (57%), Gaps = 7/376 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS+F P + +A+ + + TPIQ +P+ L+G+DV AQTGTGKT AF + Sbjct: 3 FSNFGFIPPIGKAISRINYSTPTPIQEQCIPVVLSGKDVLASAQTGTGKTAAFCLPLLNL 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + P ++ P LI++PTRELA QI + + + + GG Y Q K+ Sbjct: 63 VEKKPKHKHKRNISPDVLILSPTRELATQIEQELKRFSHFMDTNIVSVVGGVSYKLQNKL 122 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+S V+ L+ T GRL+D KQ INL I +V+DEADRM D+GFI DI+ +F Sbjct: 123 LKSNVNFLVATPGRLMDLVKQRKINLKHIDALVIDEADRMLDMGFIPDIKKIFESTSQDQ 182 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS---NEEKMRLL 247 Q L +F+ATL+ ++ ++A + + + + I VE E K+ I +++ YP N++K+ L+ Sbjct: 183 QVL--MFTATLNKQIEKIAQQFLKDPQRIAVEQENKSNKNI-QQIAYPVADYNQKKLVLV 239 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L E + ++AIIF TK + + L HR L GD++Q++R R ++ F ++ Sbjct: 240 DVLNEADL-NQAIIFTATKREADRLSDELYLMNHRSKTLHGDMSQRERTRTINRFKNNEI 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARG+ + +THV N+DLP EDY+HRIGRTGRA G +ISL ++ Sbjct: 299 QILVATDVAARGIDVDDITHVINFDLPRQVEDYIHRIGRTGRAERKGKAISLVIDKEKFM 358 Query: 368 LPAIETYIGHSIPVSK 383 L IE Y I V K Sbjct: 359 LQKIEKYANIKIEVIK 374 >UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=Alphaproteobacteria RepID=B0SYC6_CAUSK Length = 678 Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 149/348 (42%), Positives = 206/348 (59%), Gaps = 9/348 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +FS+ L P ++A+ G+ TPIQA A+P+ LAG+DV G AQTGTGKT AF Sbjct: 3 EFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLID 62 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L++ A K PRAL++APTRELA Q+ + E A+ T L L GG + Q K Sbjct: 63 KLMNGRA----KARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEK 118 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ GVD+LI T GRL+D+ ++ + + +Q +V+DEADRM D+GFI DI +F+ PP Sbjct: 119 KLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPK 178 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF-YPSNEEKMR--L 246 Q + FSAT+ + L + + + IE T I + + PS++ K + Sbjct: 179 KQ--TLFFSATMPPEITRLTKQFLKDPVRIEASRPATTNENITQLMVKVPSSDPKAKRLA 236 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ LIE+ + I+F N K + + L + G + GD+ Q +R + L F G Sbjct: 237 LRALIEKAQIETGIVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLAAFRDGS 296 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG 354 L ILVA+DVAARGL IPAV+HVFNYD+P +DYVHRIGRTGRAG SG Sbjct: 297 LKILVASDVAARGLDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRSG 344 >UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cellular organisms RepID=B0SEU1_LEPBA Length = 471 Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 152/378 (40%), Positives = 220/378 (58%), Gaps = 4/378 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + FSD L + +A+ + G+ TPIQ A+PL L D+ G AQTGTGKT AF Sbjct: 6 ETFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCAQTGTGKTAAFALPMI 65 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L+S A + K QPR+L++ PTRELA+Q+H + T ++ + +GG G + Q Sbjct: 66 HNLISTRAKPNPK--QPRSLVLVPTRELAIQVHESFVLYGKYTQIRTAVIFGGVGQNPQA 123 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K + SG+D+LI T GRL+D QN ++L +++ VLDEADRM D+GFI DIR + +P Sbjct: 124 KAIASGLDVLIATPGRLVDLMNQNLVSLKNLEIFVLDEADRMLDMGFIHDIRKIISYLP- 182 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+ FSAT+ + +LA + I+V P T I + + Y +K LL Sbjct: 183 -KRRQNLFFSATMPPEIEKLANSILVEPIRIDVTPVSSTVELISQSVMYTELADKKNLLL 241 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L +++ + IIF TKH +I L G + ++ G+ +Q R R L++F G Sbjct: 242 HLFKDKNFKKTIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFRSGKNR 301 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 LVATD+AARG+ I +THV NY++P E YVHRIGRT RAG +G +I++A + + Sbjct: 302 ALVATDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAIAIAEADERSLI 361 Query: 369 PAIETYIGHSIPVSKYNP 386 IE IG SIPV + +P Sbjct: 362 KDIEKVIGISIPVDRDHP 379 >UniRef50_O26305 ATP-dependent RNA helicase, eIF-4A family n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26305_METTH Length = 425 Score = 268 bits (684), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 21/392 (5%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +FS+F + + AL+ GF + TPIQAL LP+TL G DV G+AQTGTGKT AF Sbjct: 5 EFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLE 64 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + P+ALI+ PTREL +Q+ + + + + +K+ YGG Q+ Sbjct: 65 NLEAERV--------PQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIA 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV +++ T GRLID+ ++ ++LG I VVLDEAD M ++GFI DI + +P Sbjct: 117 QLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVP-- 174 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R MLFSAT+S + +A + M N + + VE +K +I E F E+K+ LL Sbjct: 175 ERRQTMLFSATVSKPILRIARKYMRNPQVMRVE--KKHSPKIDEFYFKTREEDKVELLDW 232 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++ +IF NTK R + + L G+ + GD++Q KR R+++ F RGD + Sbjct: 233 ILSSNNIRMGLIFCNTKRRVQRLRRQLNRMGYSADEIHGDLSQSKRERVMERFRRGDFSL 292 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARG+H+P V V NYDLP + E YVHRIGRTGRAG+SG S +L L Sbjct: 293 LVATDVAARGIHVPDVEAVVNYDLPFENEYYVHRIGRTGRAGSSGKSFTLVVGSEVHRLR 352 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 I+++ G I S ++P P + R Sbjct: 353 RIQSFTGKRIKQS---------NMPSPEEIRR 375 >UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root RepID=RHLE_ECOLI Length = 454 Score = 268 bits (684), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 149/381 (39%), Positives = 218/381 (57%), Gaps = 8/381 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L P ++ A+ ++G+ TPIQ A+P L GRD+ AQTGTGKT F + Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L++ A K +P RALI+ PTRELA QI + ++ ++ + +GG + Q+ Sbjct: 63 LITRQPHA--KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GVD+L+ T GRL+D QN + L ++++VLDEADRM D+GFI DIR + ++P Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA- 179 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R N+LFSAT S ++ LA + ++N IEV ++ + + + + K LL Sbjct: 180 -KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSH 238 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +I + + ++F TKH + L DG R + G+ +Q R R L +F GD+ + Sbjct: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATD+AARGL I + HV NY+LP+ EDYVHRIGRTGRA A+G ++SL C + L Sbjct: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358 Query: 370 AIETYIGHSIP---VSKYNPD 387 IE + IP + Y PD Sbjct: 359 DIEKLLKKEIPRIAIPGYEPD 379 >UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L498_9DELT Length = 492 Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 152/385 (39%), Positives = 218/385 (56%), Gaps = 20/385 (5%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F LH + E +++ G+ N TPIQA A+P GRD+ G AQTGTGKT AFL H Sbjct: 3 FDSFCLHATITENIKRLGYENPTPIQAEAIPHVTEGRDLMGLAQTGTGKTAAFLLPIIHR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L++ + R V RALI+APTRELA QI+ L T L+ + YGG G Q + Sbjct: 63 LMTTKS-EKRGV---RALILAPTRELAEQIYRAGLDLGRGTRLRAAVIYGGVGMFPQTRA 118 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVDI++ GRL+D+ Q ++ A++ +VLDEAD M+D+GF+ DI+ + +P + Sbjct: 119 LRQGVDIIVACPGRLLDHMNQGNVRFDALETLVLDEADHMFDMGFLPDIKRILSALP--S 176 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGH----RIKEELFYP-SNEEKMR 245 +R +LFSAT+ + LA E + + + + GH E YP S+ +K Sbjct: 177 ERQTLLFSATMPPAISGLAHETLTDPVTVRI------GHMAPLSTVEHAIYPISHTQKAP 230 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL L+EE I+F TKHR + + L GH+ L G+++Q++R +D F RG Sbjct: 231 LLLHLLEEAGKQSVIVFTRTKHRAKNLALQLCRSGHKATCLQGNLSQRQRQIAMDGFRRG 290 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 +LVATD+AARG+ + V HV N+D+PD E Y HRIGRTGRA G + + E Sbjct: 291 SFQVLVATDIAARGIDVSQVGHVVNFDIPDTAEAYTHRIGRTGRAEHEGQAHTFVTGEDM 350 Query: 366 LNLPAIETYIGHSIP---VSKYNPD 387 + AIE+++ +P V + PD Sbjct: 351 GMVRAIESHMKKPLPRREVEGFEPD 375 >UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AFH3_NITEC Length = 488 Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 150/390 (38%), Positives = 225/390 (57%), Gaps = 10/390 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L +++ A+ +G+ N TPIQA +P LAG+DV AQTGTGKT F H+ Sbjct: 7 FEQLDLSSEILRAVIDEGYINPTPIQAQVIPPILAGKDVMASAQTGTGKTAGFTLPLLHH 66 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L +H + + P RALIMAPTRELA+QI + L+ + +GG + Q+ Sbjct: 67 LQAHASSSTSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTTVVFGGVNIEPQIT 126 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L +GV+IL+ T GRL+D + +N +++VLDEADRM D+GF+ DI+ + +P Sbjct: 127 ELRNGVEILVATPGRLLDLVEHKAVNFSKTEILVLDEADRMLDMGFLPDIKKVMALLP-- 184 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +QR +++FSAT S +R+LA + + IEV + I + E K LL Sbjct: 185 SQRQSLMFSATFSDEIRKLADGLLKHPVRIEVAAQNTINESISHVVHRIKPESKFALLLH 244 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLT--GDVAQKKRLRILDEFTRGDL 307 L++++ +A++F TKH ++ L+ H++ L GD Q++R + L EF GD+ Sbjct: 245 LVKQQDLKQALVFVKTKHGASQLAQMLS--HHKILALAIHGDKNQQQRTQALSEFKHGDV 302 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARG+ I ++HV NY+LP + EDYVHRIGRTGRAG+ G +ISL E Sbjct: 303 QILVATDVAARGIDIEKLSHVVNYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHETEL 362 Query: 368 LPAIETYIGHSIPVSK---YNPDALMTDLP 394 L +IE + + + + ++ + + LP Sbjct: 363 LTSIEKLLNTKLEIEQIAGFDAELFVRSLP 392 >UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Clostridium RepID=A6M3F5_CLOB8 Length = 525 Score = 267 bits (682), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 148/377 (39%), Positives = 228/377 (60%), Gaps = 14/377 (3%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + +F+ L +V+A+ GF + IQ ++P+TL+G D+ GQAQTGTGKT A+ Sbjct: 1 MNDNQFATLGLKESIVKAISDLGFTKPSQIQEQSIPVTLSGADLIGQAQTGTGKTAAY-- 58 Query: 66 STFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 S P I N+ ++LI+APTRELAVQ++ + + L++ + YGGD Sbjct: 59 -------SLPIITKMSDNRGIKSLILAPTRELAVQVNEEIQRLSKYEKIVTLAVYGGDSI 111 Query: 125 DKQLKVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 D+Q++ L G VDI++GT GR++D K+ ++L +I+ +VLDEAD M ++GFI DI+ + Sbjct: 112 DRQIRALRKGDVDIVVGTPGRILDLVKRKCLHLESIEFLVLDEADEMLNMGFIDDIQEIL 171 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEE 242 P ++R +LFSAT+ + +LA + M +A+ + ++ T +I++ F +N+ Sbjct: 172 SHTP--SERQTLLFSATMPDPIAKLAKKYMKPDAKLVSIKRSSLTVSKIEQSYFMINNKH 229 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 ++ L L++ + P AIIF TK +E+ L + G+ V + GD+ Q RL L++F Sbjct: 230 RLEALCRLLDLDNPSSAIIFCRTKRGVDELVQELQSKGYMVEGMHGDMTQAHRLTTLNKF 289 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G L++L+ATDVAARG+ + VTHVFNYDLP D E YVHRIGRTGRA SG + SL Sbjct: 290 KEGTLNLLIATDVAARGIDVEGVTHVFNYDLPQDVESYVHRIGRTGRANKSGTAYSLVTP 349 Query: 363 EYALNLPAIETYIGHSI 379 + L I+ SI Sbjct: 350 KDFSMLKQIQNVTKSSI 366 >UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTY3_CHLT3 Length = 431 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 153/376 (40%), Positives = 205/376 (54%), Gaps = 5/376 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F +L+P ++ AL++ G+ T IQA A+P + G+D+ AQTGTGKT AF H Sbjct: 6 FESISLNPSILRALKELGYETPTAIQAAAIPEAILGKDILATAQTGTGKTAAFALPILHR 65 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L + + + PRALI+ PTRELA+QI + A L+ G+ GG Q+K+ Sbjct: 66 LGENRSY---DIRAPRALILTPTRELALQIDNNIRLYARYLRLRTGVIMGGVPAHPQIKM 122 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L DIL+ T GRLID Q I L IQ VLDEADRM D+GFI DIR + P + Sbjct: 123 LRRNPDILVATPGRLIDLFDQGFIGLDQIQTFVLDEADRMLDMGFIDDIRRIESLQPRDH 182 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q L LFSATLS + LA + IEV P I +++ + K LL L Sbjct: 183 QTL--LFSATLSPEIEALASRMLREPVRIEVAPVSSVADNITQKVLFVEQNNKRELLHNL 240 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 +E RA++F TK R + L G + +Q+ R R L F RG +++L Sbjct: 241 FKENDIKRALVFTRTKQRANHVAEQLIRLGISADAIHSSKSQRARQRALMLFDRGKINVL 300 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ + ++HV NY+LPDD E+YVHRIGRT RAGASG ++S + L Sbjct: 301 VATDIAARGIDVDGISHVINYELPDDPENYVHRIGRTARAGASGTALSFCDADEVRMLKG 360 Query: 371 IETYIGHSIPVSKYNP 386 IE SI + NP Sbjct: 361 IEKLTKSSIAICDNNP 376 >UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D673_LARHH Length = 582 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 160/419 (38%), Positives = 226/419 (53%), Gaps = 14/419 (3%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ F+D L ++ A+ + G+ TPIQ A+ LAGRD+ AQTGTGKT F Sbjct: 1 MSSISFADLQLVDPLLRAITEAGYTEPTPIQREAIAPVLAGRDLMAAAQTGTGKTAGFAL 60 Query: 66 STFHYLLS---HPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 L + HP A R PR L++ PTRELA Q+ L L + +GG Sbjct: 61 PLLQRLAATHPHPHPAGR----PRGLVLTPTRELAAQVGESIATLGTHLPLTSLVIFGGV 116 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q++ L VDILI T GRLID AKQ ++L ++++VLDEADRM D+GFI+D+R + Sbjct: 117 RVKPQIEALTQRVDILIATPGRLIDLAKQEAVDLSGVEILVLDEADRMLDMGFIRDVRKV 176 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 + +P +R N+LFSAT + ++ LA +++ + +EV P T + + Sbjct: 177 LKLLP--AERQNLLFSATFNDDIKALADTFLHDPQLVEVSPPNSTTELVTHHVHLVDRNR 234 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K LL L+E + ++F TKH + LA G + G+ +Q R R L EF Sbjct: 235 KRELLTHLVESRQWQQVLVFTRTKHGANRLAEVLAKGGIPAAAIHGNKSQGARTRALSEF 294 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G L +LVATD+AARG+ I + V NY+LP+ EDYVHRIGRTGRAG+ G ++SL C Sbjct: 295 KDGSLRVLVATDIAARGIDISELPQVVNYELPNVPEDYVHRIGRTGRAGSPGEAVSLVCV 354 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDL---PKPLRLTRPRTGNGPRRTGAPRNRR 418 + L IE +IG IP ++ DL P+PL R + G G PR +R Sbjct: 355 DELKLLADIEAFIGRPIP--QFTEPGFEADLSVPPQPLLPPRHQQGRQDGEGGEPRGQR 411 >UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCQ8_9CAUL Length = 510 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 146/380 (38%), Positives = 219/380 (57%), Gaps = 5/380 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L+ +++AL +G+ TPIQ A+P + G+D+ G AQTGTGKT AF H Sbjct: 18 FESMGLNKALLQALASEGYTKPTPIQEKAIPDVMQGKDLLGIAQTGTGKTAAFALPILHR 77 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L + IA K R L+++PTRELA QI + G ++ + +GG Y Q + Sbjct: 78 LAEN-RIAP-KPRTTRVLVLSPTRELATQIGDSFKAYGAHLGFRVAVIFGGVKYGAQERA 135 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ G+DIL+ GRL+D+ +Q +++L + +++VLDEAD+M DLGFIK IR + R+P Sbjct: 136 LQQGLDILVAAPGRLLDHIQQKNLDLSSTEILVLDEADQMLDLGFIKPIRQIVSRIP--A 193 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R N+ FSAT+ + +LA E + + ++V P+ T RI + + + K LL + Sbjct: 194 KRQNLFFSATMPTEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVHVEQGRKRALLTEM 253 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + R ++F TKH +++ +L A G G + G+ +Q +R R LD F +G L +L Sbjct: 254 FSDPEYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLDAFKKGKLRVL 313 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ + V+HV N++LP E YVHRIGRT RAGA G +IS + L Sbjct: 314 VATDIAARGIDVDGVSHVVNFELPHVPEAYVHRIGRTARAGADGTAISFVAGDEMKLLKD 373 Query: 371 IETYIGHSIP-VSKYNPDAL 389 IE IP + + N AL Sbjct: 374 IEKVTRQKIPAIDRRNDKAL 393 >UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9A4_DESAH Length = 616 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/379 (39%), Positives = 213/379 (56%), Gaps = 10/379 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 +E FS+ L V++AL+ G+ T IQA +P LAGRD+ GQAQTGTGKT AF Sbjct: 16 FSESGFSEMGLIKPVLKALDDLGYETPTTIQAETIPYILAGRDLLGQAQTGTGKTAAFAL 75 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGY 124 LLS D K+ +P+ L++APTRELA+Q+ + A G + YGG Y Sbjct: 76 P----LLSR---IDIKLKKPQVLVLAPTRELAIQVAESFKGYAARIKGFNVLPVYGGQAY 128 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 QL L+ GV +++GT GRL+D K+ ++L I +V+DEAD M +GFI D+ W+ Sbjct: 129 AGQLNQLKRGVHVIVGTPGRLMDLMKRGVLDLTQIMTLVIDEADEMLRMGFIDDVEWILE 188 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 + PP Q LFSAT+ ++++A + + + + + + T I++ + K+ Sbjct: 189 QTPPGRQ--VALFSATMPAPIKKIAIKYLTDPKDVFIRLRTATADTIRQRFWMVKGTHKL 246 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L ++E E D I+F TK E+ L A G+ L GD+AQK R R +D F + Sbjct: 247 DALTRILEAETFDAIIVFVRTKTATVELAEKLEARGYAAVALNGDIAQKARERTIDRFKK 306 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G +DILVATDVAARGL + V+HV NYD+P+ E YVHRIGRTGRAG +G +I Sbjct: 307 GKIDILVATDVAARGLDVERVSHVINYDIPNGAESYVHRIGRTGRAGRAGDAILFVSPRE 366 Query: 365 ALNLPAIETYIGHSIPVSK 383 L IE I + K Sbjct: 367 RWMLKVIEKTTRQQIEMMK 385 >UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=Alphaproteobacteria RepID=A7IK90_XANP2 Length = 559 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 148/372 (39%), Positives = 217/372 (58%), Gaps = 4/372 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS+ L +V AL + TPIQA A+P LAGRD+ G AQTGTGKT AF Sbjct: 39 FSNLGLAEPIVRALTEAQHVTPTPIQAEAIPQILAGRDLIGIAQTGTGKTAAFALPILDR 98 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+ HP + K RAL+++PTREL+ QI + E + + LA GG +Q++ Sbjct: 99 LVRHPHRPEPK--SVRALVLSPTRELSGQIVENFEKFGRHANISVSLAIGGVPMGRQIRA 156 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+L+ T GRLID + + + L ++V+VLDEAD+M D+GF+ IR + RR+P + Sbjct: 157 LSRGVDVLVATPGRLIDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIVRRLP--H 214 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R ++ FSAT+ + + ELA + + + V P KT R+++ + K +LL + Sbjct: 215 KRHSLFFSATMPHAIAELAGSMLRDPVRVAVTPVAKTADRVEQRVILVDKANKGQLLAEV 274 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E DRA++F+ TKH +++ LA G + G+ +Q +R R+L F G + L Sbjct: 275 LSTEDIDRALVFSRTKHGADKVVRVLAKAGIAAEAIHGNKSQNQRDRVLAAFREGKIRTL 334 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 +ATD+AARG+ + V+HV N+DLP+ E YVHRIGRT RAG G +IS E L + Sbjct: 335 IATDIAARGIDVTGVSHVINFDLPNVPESYVHRIGRTARAGREGIAISFCDHEERAFLRS 394 Query: 371 IETYIGHSIPVS 382 IE I +P S Sbjct: 395 IEKLIKMQLPSS 406 >UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular organisms RepID=B1VFV5_CORU7 Length = 778 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 148/363 (40%), Positives = 212/363 (58%), Gaps = 10/363 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L P+V +A+ GF +PIQ +PL +AG DV G AQTGTGKT AF Sbjct: 133 FGDLGLSPEVFDAVRAVGFTKPSPIQEQTIPLLMAGEDVVGLAQTGTGKTAAFALP---- 188 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQLK 129 +LS + RK P+AL++APTRELA+Q+ E AE G + + YGG Y QL Sbjct: 189 ILSRLNLKSRK---PQALVLAPTRELALQVAESFEDFAEKMGGVNILPIYGGQPYGAQLS 245 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G +++GT GR+ID+ ++ +++ ++ +VLDEAD M ++GF +D+ + P Sbjct: 246 GLRRGAHVVVGTPGRVIDHLQKGSLDISELRFMVLDEADEMLNMGFQEDVERILEDTPED 305 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q LFSAT+ +R L+ +N+ + + V+ Q+T I+++ + EK+ L Sbjct: 306 KQV--ALFSATMPSAIRHLSKRYLNSPQEVTVKSTQRTAENIEQDYLIVHHREKLDALTR 363 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E D I+F TK+ EE+ L A G+ + GD+AQ +R R +D+ G LDI Sbjct: 364 ILEVTDFDAMIMFVRTKNDTEELAERLRARGYEAAAINGDIAQAQRERTVDQLKDGRLDI 423 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL + +THVFNYD+P D E YVHRIGRTGRAG SG ++ L Sbjct: 424 LVATDVAARGLDVERITHVFNYDIPRDTESYVHRIGRTGRAGRSGRAVLFVTPRERRMLK 483 Query: 370 AIE 372 +IE Sbjct: 484 SIE 486 >UniRef50_C7PAU3 DEAD/DEAH box helicase domain protein n=7 Tax=Bacteria RepID=C7PAU3_CHIPD Length = 414 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/380 (39%), Positives = 217/380 (57%), Gaps = 8/380 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF + + ++ +LE+ GF T IQ A+P L G DV AQTGTGKT AF H Sbjct: 2 KFEQYRISEEIKRSLEELGFKRPTDIQFKAIPSILKGDDVLAIAQTGTGKTAAFAIPVLH 61 Query: 70 YLLS-HPAIADRKVN-QPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L HP RK + R ++M PTRELAVQI E LA+ T L + +GG Q Sbjct: 62 KLQQYHP----RKTKGEVRCVVMVPTRELAVQISEVFERLAKYTKLNILGLHGGVDQAPQ 117 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 LK L GVD+LI T GR+ D Q I+L +++LDEAD M DLGFI+DIR + + +P Sbjct: 118 LKKLAQGVDVLIATPGRMFDLISQGFIDLSQTGILILDEADHMLDLGFIRDIRDVLKHLP 177 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +Q L FSAT+ +++LA+ +NN I++ P+ ++ + Y ++K L Sbjct: 178 RRHQTL--FFSATIDEDIKDLAYSVVNNPIRIQISPQDPVSKNVQHAVAYVGMDDKRFFL 235 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + L++E ++ ++F TK R E + + G + + G Q RL+++DEF +GD+ Sbjct: 236 ERLVKEFPENKILVFVRTKVRAERVAAAMERVGIKSLTMHGGKEQDNRLQVMDEFKKGDI 295 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +L+ TDV ARG+ IP V +V NYDLPD E+YVHR+GRTGR G ++S +E Sbjct: 296 KLLITTDVNARGIDIPDVEYVVNYDLPDVPENYVHRVGRTGRGVKKGQAVSFCSDEEKPV 355 Query: 368 LPAIETYIGHSIPVSKYNPD 387 L AI+ Y+G I V K + + Sbjct: 356 LDAIQQYLGKEITVMKIDKN 375 >UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=Gammaproteobacteria RepID=A0KXT6_SHESA Length = 491 Score = 264 bits (675), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 152/369 (41%), Positives = 211/369 (57%), Gaps = 5/369 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS LH +V+A+ + G+ TPIQ A+P LAG++V AQTGTGKT +F+ H Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 P I ++V RA+I+ PTRELA+Q+ + A+ L YGG Q K Sbjct: 63 FADAPKIRPKRV---RAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKR 119 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+L+ T GRL+D Q I + V+VLDEADRM D+GFI+DI + ++P Sbjct: 120 LIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLP--E 177 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 QR N+LFSATLS +V+ LA + +A IE+ + I + L ++K LL L Sbjct: 178 QRQNLLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDKKSALLSHL 237 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I+E+ +A+IF TKH ++ L G +Q R ++L +F G + L Sbjct: 238 IQEQNWSQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQLLIDFKAGKVSFL 297 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VAT VA+RG+ I A+ V NYDLPD+ +DY+HRIGRTGRAG G +IS ++ NL A Sbjct: 298 VATGVASRGIDIDALARVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCA 357 Query: 371 IETYIGHSI 379 IE +GH I Sbjct: 358 IERRLGHVI 366 >UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI64_BREBN Length = 493 Score = 264 bits (674), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 139/350 (39%), Positives = 215/350 (61%), Gaps = 11/350 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ F P++++ ++ + T IQ A+PL + G+D+ GQAQTGTGKT AF+ + Sbjct: 5 FASFGFRPELMQGIQDLYYKEPTQIQEEAIPLIMEGKDLIGQAQTGTGKTAAFMLPILNA 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L D +ALI+ PTREL++QI + E L + + + +GG DKQL Sbjct: 65 L-------DEGKRDIQALILTPTRELSIQIAKEVEKLGKHLNVNVLSLHGGTDIDKQLSK 117 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ V I++GT GR++D+ K+ ++ G I +VLDEAD+M ++GF++D+ + P + Sbjct: 118 LKETVQIVVGTPGRVLDHMKRGSLHFGRISTLVLDEADKMMEMGFLEDVEQVIVHTP--S 175 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLLQT 249 QR +LFSAT+ V++LA M +I++E +QKT RI E+ +Y N+ +K L Sbjct: 176 QRQVLLFSATMPDLVKKLAHRFMKQPPHIKIEGKQKTVERI-EQFYYVVNQSDKTDALVD 234 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E+E P I+FANT+ R +++ L +G L GD++Q KR +++ +F Sbjct: 235 VLEQEQPFLTIVFANTQVRVQQLTARLQENGLSAKALYGDLSQNKREQLMKQFREIRFQF 294 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 L+ATD+AARGL + VTHV NYDLP+D + Y+HR+GRTGRAG G +ISL Sbjct: 295 LIATDIAARGLDVEGVTHVINYDLPNDVDSYIHRVGRTGRAGQKGKAISL 344 >UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZJL9_THASP Length = 545 Score = 264 bits (674), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 153/381 (40%), Positives = 216/381 (56%), Gaps = 6/381 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L P++++A+ G+ TPIQ A+P+ +AG+DV G AQTGTGKT F H Sbjct: 3 FADLGLIPELLQAVTDAGYTEPTPIQRQAIPIVIAGKDVMGGAQTGTGKTAGFTLPLLHR 62 Query: 71 LLSHPAIADRKV-NQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + H + +Q RALI+APTRELA+Q+ + ++ L+ YGG Q Sbjct: 63 IARHANTSTSPARHQTRALILAPTRELAMQVFESVKTYSKHLPLRSVCVYGGVDIRPQQA 122 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G++I+I T GRL+D+ +Q INL ++V+VLDEADRM D+GFI DI+ + +P Sbjct: 123 ELRRGIEIVIATPGRLLDHLEQKSINLSQVEVLVLDEADRMLDMGFIPDIKRILALLP-- 180 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 QR ++LFSAT S ++ LA + + + IEV I + S+ K LL Sbjct: 181 KQRQSLLFSATFSDEIKRLADQMLKEPQLIEVARRNMVSETITHVVHPVSSGMKRNLLAH 240 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ + +A++F +TK C + +L G + GD Q++R L+ F G L + Sbjct: 241 LLRHKPDTQALVFVDTKLMCGRLAHYLERSGISADAIHGDKGQQQRTDTLEAFKSGKLRV 300 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL I + V N++LP EDYVHRIGRTGRAG G++ISL E L Sbjct: 301 LVATDVAARGLDIDELPFVINFELPHTAEDYVHRIGRTGRAGHHGYAISLVSSEEKHWLS 360 Query: 370 AIETYIGHSIP---VSKYNPD 387 IE I IP V ++PD Sbjct: 361 EIEKLIKLQIPQERVPGFDPD 381 >UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=Comamonadaceae RepID=C5CU85_VARPS Length = 601 Score = 264 bits (674), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 148/373 (39%), Positives = 211/373 (56%), Gaps = 5/373 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L P +++A+ + G+ TPIQA A+P L G D+ G AQTGTGKT AF H Sbjct: 3 FDELKLAPAILKAVHEHGYDTPTPIQAQAIPAVLEGHDLLGGAQTGTGKTAAFTLPMLHK 62 Query: 71 LLSHPAIADRKVNQP--RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L S A A K RAL++ PTRELA Q+ + L + +GG G + Q+ Sbjct: 63 L-STGASATNKFGGIGIRALVLTPTRELAAQVEESVRTYGKYLELDSTVIFGGVGMNPQI 121 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L+ GVDIL+ T GRL+D +Q ++L +Q+++LDEADRM D+GFI D++ + +P Sbjct: 122 SKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKILALVPK 181 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 Q L LFSAT S +R+LA + N + I+V P T RI + + +K LL Sbjct: 182 EKQSL--LFSATFSDEIRDLAATLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKALLA 239 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +I E + ++F TK + L +G L G+ +Q R + L F GD+ Sbjct: 240 HIINENKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGDIR 299 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 LVATD+AARG+ I + HV NY++P+ EDYVHRIGRTGRAG+SG ++S C + + Sbjct: 300 ALVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCMDEEGFM 359 Query: 369 PAIETYIGHSIPV 381 IE + +IPV Sbjct: 360 QEIERFTKQTIPV 372 >UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP56_9GAMM Length = 427 Score = 263 bits (673), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 150/374 (40%), Positives = 218/374 (58%), Gaps = 5/374 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ F++ AL P++ L+ G+ TPIQ+ A+PL L G D+ +AQTGTGKT +F Sbjct: 1 MSASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L +P R V RAL++APTRELA+Q+ + G+++ YGG + Sbjct: 61 PIIEKLSKNPIDGYRPV---RALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVE 117 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+K L+ G DIL+ T GRL+D +Q I+L ++ +VLDEADRM DLGFI I+ + Sbjct: 118 NQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDY 177 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 A+ R +LF+AT V LA +NN I+V P T +I++ + +K Sbjct: 178 A--ADDRQTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQFAYQVDYGQKAD 235 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 +L LI E + ++F TK R +E+ +L +G + G+ +Q++R+R+L+EF G Sbjct: 236 ILSYLITEGKWGQTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAG 295 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 DL +LVATDVAARGL I ++ +V NYDLP+ E YVHRIGRTGRAG +G ++SL Sbjct: 296 DLHVLVATDVAARGLDIESLPYVVNYDLPNQPEAYVHRIGRTGRAGETGEAVSLVAPAER 355 Query: 366 LNLPAIETYIGHSI 379 L IE I I Sbjct: 356 EFLQRIEKLIKQKI 369 >UniRef50_Q48FQ8 ATP-dependent RNA helicase, DEAD box family n=23 Tax=Pseudomonadaceae RepID=Q48FQ8_PSE14 Length = 570 Score = 263 bits (672), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 147/379 (38%), Positives = 216/379 (56%), Gaps = 11/379 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ LHP +V A+ G+ + IQ ++P+ LAG D+ GQAQTGTGKT AF H Sbjct: 19 FAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHR 78 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQLK 129 + D +P+ALI+APTRELA+Q+ E A + G+ + YGG QLK Sbjct: 79 I-------DPSKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK 131 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 + +G I++ T GRL D+ +++ L + +VLDEAD M LGF+ D+ +F+ MP Sbjct: 132 AIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPET 191 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q +LFSATL +R +A + + ++++++ + +T I++ ++K + + Sbjct: 192 RQ--TVLFSATLPQSIRAIAERHLRDPKHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLS 249 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+E E D I+F TK ++ L A G++ L GD+AQ +R R++D G LDI Sbjct: 250 LLEVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDI 309 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 +VATDVAARGL +P +THVFN D+P D E YVHRIGRTGRAG G ++ L L Sbjct: 310 VVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQ 369 Query: 370 AIETYIGHSIPVSKYNPDA 388 IE G + + PDA Sbjct: 370 VIERVTGQKVAEVRL-PDA 387 >UniRef50_B7VSB7 ATP-dependent RNA helicase n=74 Tax=Gammaproteobacteria RepID=B7VSB7_VIBSL Length = 689 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 148/366 (40%), Positives = 211/366 (57%), Gaps = 14/366 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F++ AL+ ++ AL+ GF + TPIQA A+PL L GRD G+AQTGTGKT AF Sbjct: 35 QFNELALNENILSALDSMGFVSPTPIQAAAIPLLLEGRDALGKAQTGTGKTAAF------ 88 Query: 70 YLLSHPAIADRKVNQ--PRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDK 126 S P + +NQ P+A+IMAPTRELA+Q+ A+ + L + GLK+ YGG Sbjct: 89 ---SLPLLNKINLNQHKPQAIIMAPTRELAIQVAAEIKNLGRDIKGLKVLEIYGGASIVD 145 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q++ L G I++GT GR+ D ++ ++L VLDEAD M +GF+ D+ W+ + Sbjct: 146 QMRALSRGAHIVVGTPGRVKDLLTRDRLHLDEAHTFVLDEADEMLKMGFVDDVTWILEQA 205 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P + QR+ LFSAT+ V+ + + N ++V T ++ + + EK Sbjct: 206 PESAQRV--LFSATMPPMVKTIVDRYLRNPAKVDVAGTNHTVDKVAQNYWVVKGVEKDEA 263 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 + L+E E D +I+F T+ E + L+A G + L GD+ Q R R +D +G Sbjct: 264 MSRLLETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGV 323 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 +DILVATDV ARGL +P +THVFNYD+P D E Y+HRIGRTGRAG G +I L Sbjct: 324 IDILVATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIR 383 Query: 367 NLPAIE 372 L IE Sbjct: 384 MLRTIE 389 >UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Verrucomicrobia RepID=B1ZWV2_OPITP Length = 409 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 209/370 (56%), Gaps = 8/370 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L V+ + G+ + TPIQ A+P+ L G D+ G AQTGTGKT AF Sbjct: 3 FKALQLSAPVLRGVVAAGYTDPTPIQLRAIPVVLGGGDLIGSAQTGTGKTAAFALPILTR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L +H A A PR L++ PTRELA Q+ A T L+ +GG GY Q Sbjct: 63 LGAHAARA------PRVLVLEPTRELAAQVETAFRDFARFTDLRTVAVFGGVGYGLQRTE 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ GVD+++ T GRL+DY INL ++++VLDE DRM D+GF+ ++ + +R P Sbjct: 117 LKRGVDVIVATPGRLMDYLHDRTINLQGVEILVLDEVDRMLDMGFLPVVKDIIQRCP--R 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 QR + FSAT+ ++ +A + N +EV + +K L+ + ++K LL+ L Sbjct: 175 QRQTLFFSATVPPEIQAVASFALRNPTRVEVGVNRSVNESVKHALYPVAADQKFELLEAL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + D ++F+ TKH ++I L A H V +L + +Q +R+ L F G +I+ Sbjct: 235 LARTDFDSVLVFSRTKHGADKIARKLKAANHSVAVLHANRSQNQRIEALAGFKSGKYEIM 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ + V+HV NYD+P+ EDYVHRIGRTGRA A G + +L E A ++ Sbjct: 295 VATDIAARGIDVAGVSHVINYDVPEKPEDYVHRIGRTGRAQAVGDAFTLVTPENAHDVRD 354 Query: 371 IETYIGHSIP 380 IE +IG IP Sbjct: 355 IERFIGQKIP 364 >UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Proteobacteria RepID=Q0B215_BURCM Length = 511 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/374 (39%), Positives = 207/374 (55%), Gaps = 6/374 (1%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T F+ L ++ L+ + TP+Q A+P L G+DV AQTGTGKT F Sbjct: 33 TSMSFASLGLIDPLLRNLQDLNYQTPTPVQVKAIPAVLGGKDVMAGAQTGTGKTAGFALP 92 Query: 67 TFHYLLSH-PAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L+ PA++ N+ R L++ PTRELA Q+ + L+ AYGG + Sbjct: 93 LLQRLVQQGPAVSS---NRARVLVLVPTRELAEQVLQSFVAYGKGLDLRFLAAYGGVSIN 149 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L GVD+L+ T GRL+D +QN + ++ +VLDEADRM DLGF +++ +F Sbjct: 150 PQMMKLRKGVDVLVATPGRLLDLNRQNAVQFDQVETLVLDEADRMLDLGFARELNAVFAA 209 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P QR +LFSAT + +R +A + + I V P TG +IK+ + K Sbjct: 210 LP--VQRQTLLFSATFTDDIRTMAASILRSPVNISVSPPNVTGSKIKQWVVTVDKRNKPD 267 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L L+ E D A++F T++ E + L G+ V + GD Q RLR L+ F G Sbjct: 268 LFMHLVAENNWDHALVFVKTRNGVEYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKTG 327 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 ++ +LVATDVAARGL I + V N DLP +DYVHRIGRTGRAGASG ++SL C + A Sbjct: 328 EVQMLVATDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEA 387 Query: 366 LNLPAIETYIGHSI 379 L AIE IG ++ Sbjct: 388 PQLAAIEALIGQTL 401 >UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Alphaproteobacteria RepID=A5G1U8_ACICJ Length = 525 Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 161/414 (38%), Positives = 229/414 (55%), Gaps = 21/414 (5%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ L ++ A+ ++ + TPIQA ++P+ L G D+ G AQTGTGKT AF+ H Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPILHR 118 Query: 71 LLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + A+R PRA L++APTRELA QI A + T + + GG Q Sbjct: 119 I-----AANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQ 173 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + +ESGVD+L+ T GRL+D+ I L A++ VVLDEAD+M DLGFI IR + ++P Sbjct: 174 ARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLP 233 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 QR ++FSAT+ +R LA E + + + V E K RI +++ + EEK L Sbjct: 234 --RQRQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLLLAPEEKKDKL 291 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+ + +RAI+F TKH +++ HL G + G+ +Q +R R LD+F G + Sbjct: 292 AWLLADVAVERAIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRI 351 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATD+AARG+ + V+HV N++LP+ E YVHRIGRT RAGA G +ISL Sbjct: 352 RVLVATDIAARGIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPY 411 Query: 368 LPAIETYIGHSI------PVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 L IET IG + PV P L+ R R G P+R G P+ Sbjct: 412 LRDIETLIGRHLVPGGAQPVRGLAPPHLLR-----ARNQVARQGQMPKRNGPPK 460 >UniRef50_Q01PH0 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PH0_SOLUE Length = 422 Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 155/423 (36%), Positives = 234/423 (55%), Gaps = 24/423 (5%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS+ L ++ L K F TPIQ+LA+ LAG+D+ AQTGTGKT+AFL T Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63 Query: 71 LLSHPAIADRKVNQP--RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + P QP RALI+ PTRELA+QI+ +A TG++ +A GG QL Sbjct: 64 LSTEP-------RQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQL 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + + G +I++ T GRL D+ + INL +++++LDE+DRM D+GF+ I+ + MP Sbjct: 117 RDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPA 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSATL V++L + NA IE+ K ++ L+ + K LL+ Sbjct: 177 --ERQTLLFSATLESSVKQLVETHVRNAVRIELGSISKPSEQVDLHLYEVDQDRKFGLLE 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ EE ++FA TKH +++ LA G + + GD +Q +R++ L F G Sbjct: 235 MMLREEQGS-FLVFARTKHGADKLAKKLAQSGFKSAAIHGDRSQNQRIQALKGFQEGYYR 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE------ 362 +LVATDVAARG+H+ ++HV N+DLP ED++HR+GRTGRAGA G + + A Sbjct: 294 VLVATDVAARGIHVEGISHVVNFDLPQVPEDFIHRVGRTGRAGAKGTASTFATRSERSEI 353 Query: 363 ---EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL--TRPRTG-NGPRRTGAPRN 416 E L++ + SI + + + LP R +RP G N R+ +P++ Sbjct: 354 GRIERTLSVKLKRREVSASIVAAPRKESSAVIVLPHAKRAEHSRPEQGRNKSFRSFSPKS 413 Query: 417 RRR 419 RR Sbjct: 414 GRR 416 >UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=B7VQT9_VIBSL Length = 523 Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 144/392 (36%), Positives = 216/392 (55%), Gaps = 5/392 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ L +++A+E +G+ +PIQ A+P L G+DV AQTGTGKT F Sbjct: 3 FTSLGLSEPILKAIEAQGYDKPSPIQEKAVPAVLTGKDVMAAAQTGTGKTAGFTLPILEM 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L P + + NQ RAL++ PTRELA Q++ L + +GG + Q++ Sbjct: 63 LSKGPRV---RQNQVRALVLTPTRELAAQVNGSVVKYGINLPLTSTVVFGGVKINPQMQK 119 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L G D+L+ T GRL+D QN + ++++VLDEADRM D+GFI+DIR + +P Sbjct: 120 LRKGSDVLVATPGRLLDLYNQNAVRFDQLEILVLDEADRMLDMGFIRDIRKILAFLP--K 177 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R N+LFSAT S +R LA +NN I V P T +++ ++ ++K +L L Sbjct: 178 KRQNLLFSATFSDDIRSLAKGLVNNPVEISVSPANSTAPTVEQSIYPVDKKKKAPMLAKL 237 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I++ + ++F+ TKH ++ L + G+ +Q R + L+ F G + +L Sbjct: 238 IKDNDWRQVLVFSKTKHGANKLARFLEEQDITSAPIHGNKSQGARTKALENFKTGKVRVL 297 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ IP + V N+DLP+ EDYVHRIGRTGRAG G +ISL C + L Sbjct: 298 VATDIAARGIDIPQLPQVVNFDLPNVSEDYVHRIGRTGRAGEVGKAISLVCADEVGELFG 357 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402 IE I + + A + LP+ +RP Sbjct: 358 IERLIQQVLERRELEGFAPVNKLPESRLDSRP 389 >UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae RepID=A7K2L3_VIBSE Length = 419 Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 148/374 (39%), Positives = 215/374 (57%), Gaps = 15/374 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D + K++E L TP+Q ++P L G+++ AQTGTGKT AF Sbjct: 5 FADLGIEQKLIETLSNLNIVTPTPVQEKSIPHVLEGKNLLAAAQTGTGKTAAFGLPIIQ- 63 Query: 71 LLSHPAIADRKVN-QPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + +K+N P+AL++ PTRELA Q+ + + T L++ YGG Q + Sbjct: 64 -----TVQQKKLNGTPQALVLVPTRELAQQVFDNLNQYSAQTELRIVCVYGGTSIGVQKR 118 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE G DILI T GRL+D+ ++N+ ++VLDEADRM D+GF D++ +FRR+P Sbjct: 119 KLEEGADILIATPGRLLDHLFNGNVNISKTSMLVLDEADRMLDMGFWPDLQRIFRRLPAE 178 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR-LLQ 248 Q L LFSAT R++ +A++ M + +EV P T +K+ + YP ++++ R LL Sbjct: 179 KQIL--LFSATFEKRIKTIAYKLMESPVEVEVSPANTTAETVKQ-MVYPVDKKRKRELLA 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI + ++F TK +E+ L DG + + GD +Q R R LDEF +G + Sbjct: 236 YLIGSRNWQQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVR 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC--EEYAL 366 L+ATDVAARGL I + V N+D+P EDYVHRIGRTGRAG SG ++SL EEY L Sbjct: 296 ALIATDVAARGLDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLL 355 Query: 367 NLPAIETYIGHSIP 380 + AIE + +P Sbjct: 356 H--AIENLLDQRLP 367 >UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D1B4W7_SULD5 Length = 583 Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 136/354 (38%), Positives = 211/354 (59%), Gaps = 10/354 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 Q F F LH +++A+ + GF +P+QA A+PL L G D+ QAQTGTGKT AF T Sbjct: 2 QTFESFGLHQDILKAINEAGFTEPSPVQAEAIPLVLQGHDIVAQAQTGTGKTAAFGLPTM 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ D N+ + L++ PTRELA Q+ + L G+K YGG Y +Q+ Sbjct: 62 -------SMIDANQNRVQLLVITPTRELATQVSDELYSLGRFCGIKTVTIYGGSSYSRQI 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 ++E G +++ T GR++D K + A ++VVLDEAD M D+GF++DI +F +P Sbjct: 115 GLIEKGASVIVATPGRMLDLLKNGRLPGFAPKMVVLDEADEMLDMGFLEDIEEIFTYLP- 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLL 247 +R +LFSAT+ ++ LA + ++ +++ + P+ T + E+L+Y NE E+ + Sbjct: 174 -KERQTLLFSATMPEPIKRLASKILHEPKFVSITPKDHTTNEDIEQLYYVINEYERDDAM 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ P+++I+F TK + + L A G+ L GD+ Q +R ++ F + Sbjct: 233 IRLLDALEPEKSIVFCRTKKEVDRLSTQLMAVGYAAKGLHGDMEQNQRESVIKAFRSSQI 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 +ILVATDVAARGL++ ++HVFNY +P D E YVHRIGRTGRAG G +I+L Sbjct: 293 EILVATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVT 346 >UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBN1_9CLOT Length = 526 Score = 261 bits (666), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 140/363 (38%), Positives = 223/363 (61%), Gaps = 12/363 (3%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + E KFS+ L +++++ GF + IQA A+P+ + G D+ GQAQTGTGKT AF Sbjct: 1 MNEIKFSNLGLKDTLLKSINDLGFEKPSQIQAEAIPVAIQGYDLIGQAQTGTGKTAAFGC 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 +++ ++ A+I+APTRELA+Q++ + + L++ L + YGGD Sbjct: 61 GIINHISKKSGLS--------AIILAPTRELAIQVNDELKRLSKYDDLTILPVYGGDPIT 112 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L+ V+I++GT GR++D+ K+ I L I+ +VLDEAD M ++GFI D+ + ++ Sbjct: 113 NQIRALKRNVNIVVGTPGRVLDHIKRGTIKLDQIKFLVLDEADEMLNMGFIDDLEDIIKQ 172 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P ++R +LFSAT+ ++R+LA M +A++I ++ T I + F S++ + Sbjct: 173 LP--SERQTLLFSATMPDQIRKLAKRYMKPDAKHISIKKTSMTVSTISQNFFEVSHKTRF 230 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L +++ + P AIIF TK +E+ + + G+ V + GD++Q RLR L +F Sbjct: 231 EALCRVLDFDTPSSAIIFCRTKKGVDELVEGMQSRGYVVEGMHGDMSQAHRLRTLKKFKE 290 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC-EE 363 G L+ LVATDVAARG+ + +THV NYDLP D E YVHRIGRTGRA G + SL +E Sbjct: 291 GSLNYLVATDVAARGIDVEGITHVINYDLPQDVESYVHRIGRTGRANREGIAYSLVSPKE 350 Query: 364 YAL 366 Y++ Sbjct: 351 YSM 353 >UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WWM6_ALIAD Length = 541 Score = 261 bits (666), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 148/372 (39%), Positives = 217/372 (58%), Gaps = 12/372 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F L+ +V++A+ GF +PIQA +P+ L GRDV GQAQTGTGKT AF Sbjct: 19 FESFGLNRRVLQAIHDMGFEEPSPIQAACIPVVLEGRDVIGQAQTGTGKTAAFGIPLVER 78 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + + P + +A+++ PTRELA+Q+ + +A+ ++ YGG Q++ Sbjct: 79 VSTEPRV--------QAIVLTPTRELAIQVAGEIRKIAKYKRVRSVPIYGGQSIVHQIRA 130 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ GV I+IGT GR++D+ + ++L +++VVLDEAD M D+GFI DI + R P + Sbjct: 131 LKQGVQIVIGTPGRVLDHIHRGTLSLSDVRMVVLDEADEMLDMGFIDDIEAILRETP--S 188 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R MLFSAT V+ LA M + ++I V + T +I + + K+ L + Sbjct: 189 DRQTMLFSATFPNEVKRLALRYMRDPQHITVNRGEVTVPQIDQVCYKVLERNKLDSLCRI 248 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ E IIF TK +++ L A G+ L GD++Q +R R++ +F + ++++L Sbjct: 249 VDSEDIQLGIIFCRTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKNEIELL 308 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC-EEYALNLP 369 VATDVAARGL + VTHV NYD+P D E YVHRIGRTGRAG G +I+L EY L L Sbjct: 309 VATDVAARGLDVDDVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREYKL-LK 367 Query: 370 AIETYIGHSIPV 381 IE I I V Sbjct: 368 QIEREIKQKITV 379 >UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHM7_GLOVI Length = 437 Score = 260 bits (665), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 145/373 (38%), Positives = 220/373 (58%), Gaps = 9/373 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS L VV+AL++ GF TPIQ ++P L GRD+ QAQTGTGKT AF Sbjct: 5 FSALGLSESVVKALDELGFEQPTPIQLKSIPFLLDGRDLLAQAQTGTGKTAAFGLP---- 60 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+ D +V AL++APTRELAVQ+ ++ +G+++ YGG D+Q++ Sbjct: 61 LVDRSDPQDARVQ---ALVLAPTRELAVQVCEAIHTYSKHSGVRVLPIYGGQPIDRQMRR 117 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L +G I++GT GR++D ++ ++L A++ +VLDEAD+M D+GFI++++ + PP Sbjct: 118 LRAGAQIVVGTPGRVLDLMRRGSLDLSALRTLVLDEADQMLDMGFIEEVQTILDAAPP-- 175 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R + FSATL +R+LA + + + E++ I + +++ + + + + L + Sbjct: 176 ERQLVFFSATLPASIRKLAARHLRTPMTLTMPAEERDTPAIAQRVYFVNFKNRAQALTRV 235 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E P A+IF TK +E+ L DGHR L GD+ Q R +L F R L+++ Sbjct: 236 LAAEDPASALIFTRTKQAADELAEQLQDDGHRAEALHGDLNQSAREAVLGRFRRQQLNVV 295 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL I ++HV NYD+P D E Y+HRIGRTGRAG +G +IS A L Sbjct: 296 VATDVAARGLDIADLSHVINYDMPQDGESYIHRIGRTGRAGRTGVAISFALPTDRYRLRL 355 Query: 371 IETYIGHSIPVSK 383 IE G ++ +K Sbjct: 356 IERATGSTLVPAK 368 >UniRef50_A1S988 Superfamily II DNA and RNA helicase-like protein n=108 Tax=Proteobacteria RepID=A1S988_SHEAM Length = 613 Score = 260 bits (664), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 218/367 (59%), Gaps = 7/367 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F DF L P+++E+L+ G + T IQ + +PL + RD+ +A TGTGKT +FL + Sbjct: 3 FEDFQLDPELLESLKAMGHNTPTTIQRMTIPLAMEQRDILARAPTGTGKTASFLLPALQH 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+ P R+ QPR L++ PTRELA QIH A LA L + L GG Y Q ++ Sbjct: 63 LIDFPR---RRPGQPRVLVLTPTRELASQIHRYASHLATNLELDIKLITGGVPYGPQEEM 119 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+S VDIL+ T GRL++Y + H + ++V+V+DEADRM D+GF + ++ + + + Sbjct: 120 LKSNVDILVATPGRLLEYLDKGHFSAELVEVLVIDEADRMLDMGFGEVVKTIA--VEASG 177 Query: 191 QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE-KMRLLQ 248 ++ MLFSATL V A E +N ++E EP + +I + + +++ K LL Sbjct: 178 RKQAMLFSATLEGGGVGSFARELLNEPMFVESEPPRSEKAKIHQWIHLADDKDHKFALLT 237 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+++E RAI+F T+ + G L G + GD+ QKKR + L FT+G+++ Sbjct: 238 HLLKQEEVKRAIVFCKTRDVVASLEGQLQQAGIACAFMRGDMDQKKRFQALGRFTKGEVN 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +L+ATDVAARG+ I +THV N+D+P + YVHRIGRTGRAGA G +ISL L Sbjct: 298 VLLATDVAARGIDIEDITHVINFDMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDMRIL 357 Query: 369 PAIETYI 375 +E YI Sbjct: 358 GKVERYI 364 >UniRef50_C6CYC6 DEAD/DEAH box helicase domain protein n=89 Tax=Firmicutes RepID=C6CYC6_PAESJ Length = 578 Score = 260 bits (664), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 141/352 (40%), Positives = 213/352 (60%), Gaps = 9/352 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F + P++ + L+ G + TP+Q A+P+ L+G+DV QAQTGTGKT+AF Sbjct: 4 EFISMGIIPELTDVLQSNGITSPTPVQKKAIPVLLSGQDVIAQAQTGTGKTIAFTLPILQ 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + D Q +ALI+ PTRELA+QI ++ + LA A G K+ AYGG D Q++ Sbjct: 64 RI-------DIDKEQVQALILTPTRELAIQITSELKKLAAAVGAKVLAAYGGQDVDAQIR 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L + I++ T GRLID+ ++ INLG ++++VLDEAD+M +GF+ +++ + + P A Sbjct: 117 KLNNSPHIVVATPGRLIDHMRRETINLGKLKMLVLDEADQMLHMGFLPEVQNIVDQTPRA 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q MLFSAT+ +++ LA M I+++ T IK+ + ++ + + L + Sbjct: 177 RQ--TMLFSATMPDQIKRLAENYMKTPVDIKIQSANVTLDNIKQLVIETTDRGRQKALIS 234 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +IE + P A+IF TK R +++ L G L GD+ Q KR +++ F L I Sbjct: 235 MIETQRPYLAVIFCRTKVRAKKLNKDLQDLGFESDELHGDLTQAKREQVMKRFRDAKLQI 294 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 LVATDVAARGL + VTHVFN+D+P D E Y+HRIGRTGRAG G +I++A Sbjct: 295 LVATDVAARGLDVEGVTHVFNFDVPTDSEIYIHRIGRTGRAGQRGTAITIAS 346 >UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Tax=Firmicutes RepID=CSHA_GEOKA Length = 467 Score = 259 bits (663), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 137/351 (39%), Positives = 214/351 (60%), Gaps = 9/351 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L +V++A+E+ GF TPIQA +PL+L +DV GQAQTGTGKT AF Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + + K + +AL++APTRELA+Q+ + + +++ YGG ++Q++ Sbjct: 64 V-------NVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRA 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ +++GT GR+ID+ + + L + VVLDEAD M ++GFI+DI + +P Sbjct: 117 LKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPA-- 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +LFSAT+ +R +A MN E ++V+ ++ T I++ ++K +L L Sbjct: 175 ERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ + P+ AI+F TK R +E+ L G+ + GD++Q KRL +L +F G ++IL Sbjct: 235 LDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEIL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 VATDVAARGL I VTHV+N+D+P D E YVHRIGRTGRAG +G +++ Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVT 345 >UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gruberi RepID=D2V713_NAEGR Length = 629 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 148/364 (40%), Positives = 208/364 (57%), Gaps = 12/364 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L PK+++ +E+ GF TP+Q ++P+ LAGRD+ AQTG+GKT AFL Sbjct: 154 FKEANLPPKLMQNIERAGFGKPTPVQKHSIPIVLAGRDLLSCAQTGSGKTCAFLFPIISN 213 Query: 71 LLS---------HPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 L++ HP + D V P LIMAPTREL+ QI+ ++ TG + +AYGG Sbjct: 214 LMTQPGYETVMPHPELMDTLVTCPSVLIMAPTRELSTQIYDESRKFTYHTGRRTVVAYGG 273 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 QLK LE G DIL+ T GRL+D + I+L +Q +VLDEADRM D+GF IR+ Sbjct: 274 AAIQYQLKQLERGCDILVATPGRLVDLIDRGSISLHNVQYLVLDEADRMLDMGFEPQIRY 333 Query: 182 LFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + MP QR+ ++FSAT ++ LA + ++N + V T I ++ Y Sbjct: 334 IVEKTGMPAPGQRITLMFSATFPKNIQTLARDFLHNNLNLTVGRVGSTHENILQKFVYCK 393 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 ++EK L+ I ++F TK + L +G + + GD Q++R L Sbjct: 394 DDEKRDLMLEAI-ASVETLTLVFVKTKKEASILEYFLMKNGFKSSSIHGDKTQRERETAL 452 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F RG ILVATDVA+RGL I V HV NYDLP++ EDYVHRIGRTGRAG +G S S Sbjct: 453 ENFRRGITPILVATDVASRGLDINDVGHVINYDLPENIEDYVHRIGRTGRAGNTGISTSF 512 Query: 360 ACEE 363 ++ Sbjct: 513 FTDK 516 >UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MN05_CRYCD Length = 551 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 162/416 (38%), Positives = 222/416 (53%), Gaps = 14/416 (3%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MSKT F D L K + A++ G+ + TP+Q A+P LAGRDV A+TGTGKT Sbjct: 1 MSKT------FHDLGLSEKALAAVDLLGYTDPTPVQEQAIPAVLAGRDVIAAAKTGTGKT 54 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AF T L H R P LI+ PTRELA+QI + +A+ +G ++ G Sbjct: 55 AAFSLPTMDRL-GHA----RHGQGPLLLIVTPTRELALQIESVCRTIAKRSGHRVTCVVG 109 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Y+ Q+ L G D+LI T GRLID Q+ +L ++ +VLDEADRM D+GF+ D+R Sbjct: 110 GVSYNPQIDSLRRGTDVLIATPGRLIDLMNQDAAHLNQVETLVLDEADRMLDMGFLPDMR 169 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + P QR +LFSAT+ + + +NN ++E+ +T I++ + Sbjct: 170 RIVAACP--TQRQTLLFSATIDSAIEDNMAHLLNNPVFVEIAHRGETADTIEQYRIPVDH 227 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 K LL L+ E R I+FA T+HR + L G V + D +Q +R R ++ Sbjct: 228 RHKNDLLIALLNERGGTRIIVFARTRHRVDTCVRKLRKAGFAVEPIHSDRSQNQRKRAIE 287 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 G DILVATDV ARG+ IP V +V N D+PD EDYVHRIGRTGRAG +G +IS Sbjct: 288 ALEAGKCDILVATDVLARGIDIPNVNYVVNLDMPDQVEDYVHRIGRTGRAGEAGCAISFV 347 Query: 361 CEEYALNLPAIETYIGHSIP-VSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 E L I+ IG IP +S + D+ +D + TR N P A R Sbjct: 348 TPENKAILRDIQKLIGKDIPEMSVESFDSSASDNALAAKATRANAQNDPELATAAR 403 >UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family n=23 Tax=cellular organisms RepID=Q0ST49_CLOPS Length = 528 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 143/371 (38%), Positives = 225/371 (60%), Gaps = 8/371 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF D L +++A++ GF + IQA ++P+ L G D+ GQAQTGTGKT AF + Sbjct: 5 KFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCA--- 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 ++++ + +K P+ALI+APTRELA+Q++ + L + L + YGG D+Q++ Sbjct: 62 -IINNADFSGKK-KSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIR 119 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L++GVDI++GT GR++D ++ + L I +VLDEAD M ++GFI D+ + + + Sbjct: 120 ALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTD 179 Query: 190 NQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 Q L LFSAT+ ++++LA M + ++I ++ T +I++ F + ++ L Sbjct: 180 RQTL--LFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRFETLC 237 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ + P+ AIIF TK +E+ + A G+ V + GD++Q RL+ L +F G LD Sbjct: 238 RVLDFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLD 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 LVATDVAARG+ + +VTHV NYDLP D E YVHRIGRTGRA G + SL + + L Sbjct: 298 FLVATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGVAYSLVTPKEYMML 357 Query: 369 PAIETYIGHSI 379 I+ + I Sbjct: 358 KQIQKHTKSKI 368 >UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Rhodopirellula baltica RepID=Q7UJ92_RHOBA Length = 485 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 149/410 (36%), Positives = 226/410 (55%), Gaps = 25/410 (6%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF D L +++ LE+ G+ TPIQA ++P L G DV G AQTGTGKT AF Sbjct: 3 KFEDLGLTGPLLQGLEQAGYETPTPIQAQSIPEILDGNDVLGAAQTGTGKTAAFALPILQ 62 Query: 70 YLLSHPAIADRKVNQPR-------------ALIMAPTRELAVQIHADAEPLAEATGLKLG 116 + D++ +P L+++PTREL+ QI A+ + T L+ Sbjct: 63 IMWED----DQERREPSKRRGGRPGRRPIRTLVLSPTRELSAQIEANFRIYGKKTRLRST 118 Query: 117 LAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFI 176 + +GG + Q++ L+SGVD L+ T GRL+D Q I+L ++++VLDEAD M D+GF+ Sbjct: 119 VIFGGVNQNPQVRELQSGVDTLVATPGRLLDLVNQGFIDLKDVEILVLDEADHMLDMGFL 178 Query: 177 KDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 D++ + + +P R N+LFSAT+ +R+LA E + + I++ P++ T RI++ + Sbjct: 179 PDVKRILKFLP--RDRQNLLFSATMPGPIRKLADEILVDPVTIQIAPQKPTVERIEQSIC 236 Query: 237 YPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 + + +K RLL IE + ++F TKH + + L G + + G+ Q R+ Sbjct: 237 FVAQADKPRLLNHFIETKATGSTLVFTRTKHGADAVARRLVKAGVKAAAIHGNKTQANRV 296 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 R L++F +LD+LVATDVAARG+ I + V NYD P+ E YVHRIGRTGRAG G + Sbjct: 297 RTLNKFKNDELDVLVATDVAARGIDIDGIQTVINYDTPNTPEAYVHRIGRTGRAGREGET 356 Query: 357 ISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGN 406 + AIE I IPV+ P P+PL+ P +G+ Sbjct: 357 VMFCGGHETKFFIAIEREIKLQIPVATGLPGC----QPRPLQ--DPESGD 400 >UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5336 Length = 523 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 8/369 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L +++A+ G+ N TPIQ +P L G+DV GQAQTGTGKT AFL + Sbjct: 88 FADLKLMRPLMDAITAAGYKNPTPIQENVIPPALRGKDVIGQAQTGTGKTAAFLIPFLNR 147 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 H + P ++M PTRELA+QI +AE LA + + YGG G +QL Sbjct: 148 WRPH------TLKGPIGVVMTPTRELALQIANEAEKLAPSKRFRCVPVYGGTGMQRQLDG 201 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L G D+++GT GR++D+ ++ ++L ++ VLDEADRM D+GF DI + +R P + Sbjct: 202 LTRGCDLVVGTPGRMLDHLQRGSMSLSQVRYAVLDEADRMLDIGFRDDIERILKRCP--S 259 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +L SAT+ ++ L M + ++ + PE+ T +I++ F + K LL+ + Sbjct: 260 ERQTLLMSATVPDSIKRLVNRYMRDPVHLHMMPEKPTVDKIRQSYFTVDQDRKFELLKRV 319 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 +E E P + +IF K + ++ L + ++ GD+ Q +R +I+ F D+ L Sbjct: 320 VEREKPRQCLIFVERKRWADNLYRDLKRAVPKAAVIHGDLPQSQREKIMAAFRTADIKYL 379 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 +ATDV +RG+ + ++HV NYDLP D E+YVHRIGRTGR G G +IS E +L Sbjct: 380 IATDVMSRGIDVSGLSHVINYDLPMDIENYVHRIGRTGRIGKDGIAISFVLPEQGEHLTN 439 Query: 371 IETYIGHSI 379 IE I I Sbjct: 440 IEMMINRLI 448 >UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8H7_UNCMA Length = 497 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 149/378 (39%), Positives = 220/378 (58%), Gaps = 12/378 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF++ L P +V A+ + GF TPIQ A+PL + G+D+ GQA+TGTGKT AF Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVE 62 Query: 70 YLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 A R ++ + L++ PTRELAVQ+ + + + G++ YGG + Q+ Sbjct: 63 --------AIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQV 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K LE I++GT GRL+++ ++ ++ I++ VLDEAD+M D+GFI + + +++P Sbjct: 115 KALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLP- 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSATLS V+ LA + + + E IE E E T + ++K L Sbjct: 174 -ERRQTLLFSATLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMPEKQKFEALT 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+++E P+ AI+F T+ R E+ L G+ L GD+ Q +R LD+F G++ Sbjct: 233 RLLDQEKPELAIVFVATRIRVGELAKALVERGYHALGLHGDLLQYQRENTLDKFKAGEVS 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL I VTHV+N+D+P D + YVHRIGRTGRAG +G + + + L Sbjct: 293 ILVATDVAARGLDIQGVTHVYNFDIPRDPDSYVHRIGRTGRAGNAGTATTFVTPKDKTAL 352 Query: 369 PAIETYIGHSIPVSKYNP 386 AIE I H I SK P Sbjct: 353 EAIEQAIDHQI-TSKPAP 369 >UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=Bacteria RepID=Q0HYG8_SHESR Length = 549 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 144/357 (40%), Positives = 210/357 (58%), Gaps = 6/357 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS L + +A+ ++G+ +PIQA A+P L G+DV AQTGTGKT F T Sbjct: 3 FSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGF-TLPLLE 61 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 LLS A K Q RAL++ PTRELA Q+ E + L+ + +GG + Q++ Sbjct: 62 LLSKGNKA--KAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+L+ T GRL+D +QN + ++++VLDEADRM D+GFI+DI+ + +P Sbjct: 120 LRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPA-- 177 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R N++FSAT S +RELA +N I V P + +K+ + +K LL L Sbjct: 178 KRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQL 237 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I++E + ++F+ TKH + L + G+ +Q R + L +F G++ +L Sbjct: 238 IKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVL 297 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL-ACEEYAL 366 VATD+AARGL I + V N+DLP+ EDYVHRIGRTGRAGASG ++SL + EE+ L Sbjct: 298 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEFKL 354 >UniRef50_D2B0M6 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B0M6_STRRD Length = 697 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 140/352 (39%), Positives = 207/352 (58%), Gaps = 9/352 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D + P++ +ALE +G PIQ +ALPL L G+D+ GQA+TGTGKT AF + Sbjct: 41 FRDLGVTPEIADALETEGIITPFPIQEMALPLALNGQDIIGQARTGTGKTYAFGVA---- 96 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +L + +PR L++ PTRELAVQ+ D A G ++ YGG Y+ Q++ Sbjct: 97 MLQRVGKPRKNRKKPRGLVVVPTRELAVQVTEDLVTAAGKLGSRILTVYGGRAYEPQVEA 156 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ GVD+++GT GRL+D KQ H++LG I V+VLDEADRM DLGF+ DI + + +P Sbjct: 157 LKQGVDVIVGTPGRLLDLVKQKHLDLGQIDVLVLDEADRMLDLGFLPDIERIIKLIP--E 214 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVE---PEQKTGHRIKEELFYPSNEEKMRLL 247 +R MLFSATL + L+ + ++ E E + + + ++ +K+ ++ Sbjct: 215 KRQTMLFSATLPGEIVALSRRYLTRPTHVRAENNDAEAEATPQTTQFVWRAHRMDKIEIV 274 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ + +IF TK C+ + L G + GD+ Q +R + L F G + Sbjct: 275 GRLLQCDGRGLTMIFCETKRACDMVVEQLKERGFAAAAVHGDLGQGQREQALRAFRNGKI 334 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 D+LVATDVAARG+ + VTHV NYD P D + YVHRIGRTGRAG +G +++ Sbjct: 335 DVLVATDVAARGIDVDDVTHVVNYDCPQDEKAYVHRIGRTGRAGKTGVAVTF 386 >UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ3_AZOC5 Length = 582 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 156/373 (41%), Positives = 208/373 (55%), Gaps = 9/373 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS+ L KV+ A+ G+ TPIQA A+P LA RDV G AQTGTGKT AF Sbjct: 66 FSELGLSEKVLSAVAATGYTTPTPIQAQAIPHVLARRDVLGLAQTGTGKTAAFTLPMLTL 125 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L A + PR LI+ PTRELA Q+ + + L + L GG + Q Sbjct: 126 LEQGRA----RARMPRTLILEPTRELAAQVEENFVRYGKNHKLNVALLIGGVSFGDQDTK 181 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+LI T GRL+D+ ++ + L I+V+V+DEADRM D+GFI DI + + +P Sbjct: 182 LLRGVDVLIATPGRLLDHVERGRLLLSGIEVLVIDEADRMLDMGFIPDIERICKLVPFTR 241 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE--EKMRLLQ 248 Q + FSAT+ ++ L + ++N +EV I + L E EK L+ Sbjct: 242 Q--TLFFSATMPPEIQRLVSQFLSNPVRVEVSKPASANTSITQLLVASGREDYEKRETLR 299 Query: 249 TLIEE-EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 LI + I+F N K + L G V L GD+ Q R + LD+F G+ Sbjct: 300 ELIRNADQLQNGIVFCNRKRDVAVVHRSLQKHGFNVVCLHGDMDQHARTQALDQFRTGEA 359 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVA+DVAARGL IPAV+HVFNYD+P EDYVHRIGRTGRAG +G +I L + A + Sbjct: 360 TLLVASDVAARGLDIPAVSHVFNYDVPHHSEDYVHRIGRTGRAGRTGTAIMLVTHDDAKS 419 Query: 368 LPAIETYIGHSIP 380 L AIE IG++IP Sbjct: 420 LAAIEKLIGNAIP 432 >UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=Deltaproteobacteria RepID=B5EAF1_GEOBB Length = 471 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 141/373 (37%), Positives = 212/373 (56%), Gaps = 17/373 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F LHPKV +E G+ TPIQ A+P ++G+DV G AQTGTGKT AF H Sbjct: 3 FKQFNLHPKVQAGIEAMGYVTPTPIQLQAIPSVISGQDVLGLAQTGTGKTAAFGLPMLHR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+ + R L++APTRELA QI+ + + T L+ YGG + Q+K Sbjct: 63 LVQE------ERGHVRGLVLAPTRELAEQINDALNGMGKQTRLRSVTVYGGVNINTQIKK 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ G +I++ GRL+D+ Q I+L ++++VLDEAD+M+D+GF+ D+R + R +P Sbjct: 117 LKEGAEIVVACPGRLLDHISQGTIDLSRVEILVLDEADQMFDMGFLPDVRKILRALP--G 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVE---PEQKTGHRIKEELFYPSNEE-KMRL 246 +R N++FSAT+ +R LA E + N ++V P H + YP + K L Sbjct: 175 KRQNLMFSATMPDDIRRLAHEILRNPVTVQVSRTAPAATVSHAL-----YPVGQHLKTPL 229 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L +++ + +IF TKHR + + L G++ L G+++Q +R LD F G Sbjct: 230 LFEMLKHTDTESVLIFTKTKHRAKRVGEQLEKAGYKATSLQGNLSQNRRQAALDGFRDGT 289 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 I+VATD+AARG+ + ++HV NYD+PD E Y HRIGRTGRA +G + ++ E Sbjct: 290 FQIMVATDIAARGIDVSLISHVINYDIPDTPEAYTHRIGRTGRAAKTGDAFTMVTSEDDY 349 Query: 367 NLPAIETYIGHSI 379 + +IE +G I Sbjct: 350 TVRSIEKVLGTKI 362 >UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=cellular organisms RepID=B4SPP3_STRM5 Length = 646 Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 143/362 (39%), Positives = 210/362 (58%), Gaps = 10/362 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+ + +F+ L V++A+ G+ +PIQA +P L GRDV GQAQTGTGKT Sbjct: 1 MSQESQAQLQFAQLGLSESVMQAVTAIGYETPSPIQAATIPAMLEGRDVLGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQI-HADAEPLAEATGLKLGLAY 119 AF + D + +P+AL++APTRELA+Q+ A ++ G ++ Y Sbjct: 61 AAFALPVLSNI-------DLQQIKPQALVLAPTRELAIQVAEAFQSYSSKIPGFRVLPVY 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y +QL L GV I++GT GR+ID+ ++ ++L ++ +VLDEAD M +GFI D+ Sbjct: 114 GGQPYGQQLSALRRGVHIVVGTPGRVIDHLDRSTLDLSELKTLVLDEADEMLRMGFIDDV 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + +++P +R LFSAT+ ++R +A + + + + + T I++ ++ S Sbjct: 174 EAVLKKLP--AKRQVALFSATMPPQIRRIAQTYLQDPVEVTIAAKTTTSANIRQRYWWVS 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ L ++E E D IIFA TK EE+ L A G + GD+ Q +R R + Sbjct: 232 GMHKLDALTRILEVEPFDAMIIFARTKAGTEELASKLQARGLAAAAINGDMQQAQRERTI 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 G LDILVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 292 AMLKEGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILF 351 Query: 360 AC 361 A Sbjct: 352 AT 353 >UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Clostridia RepID=C5RIK3_CLOCL Length = 536 Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 140/365 (38%), Positives = 218/365 (59%), Gaps = 10/365 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F++ L ++++A+ GF +PIQ+ ++P+ + G D+ GQAQTGTGKT AF + Sbjct: 5 KTFNELNLKDEILKAINDMGFEEPSPIQSESIPVGIEGYDLIGQAQTGTGKTAAFGSIIL 64 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + R+V P+ALI+APTRELA+Q++ + +A+ L + YGG D+QL Sbjct: 65 NNMSEK-----RRV--PQALILAPTRELAIQVNEELVRIAKNMRLNILPIYGGQPIDRQL 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L +GVDI++GT GR++D+ ++ +N ++ +VLDEAD M ++GFI DI + + + Sbjct: 118 RALRNGVDIVVGTPGRVLDHLRRKSLNTEFVKFLVLDEADEMLNMGFIDDIEEVMKSLNE 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQM-NNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 Q L LFSAT+ ++ L+ M ++A+ I +E T I + + N ++ L Sbjct: 178 DRQTL--LFSATMPDAIKRLSKRYMKSDAKLISIEKNTVTASTITQYYYEIKNSDRFESL 235 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I+ + P+ AIIF TK +E+ + G+ V + GD+ Q +R+ L +F +L Sbjct: 236 CRIIDADEPEAAIIFCKTKKGVDELVSSMQRRGYVVEGMHGDMNQNQRMNTLKKFKESNL 295 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 D LVATDVAARG+ + VTHV NYDLP D E YVHRIGRTGRA G + +L + Sbjct: 296 DFLVATDVAARGIDVENVTHVINYDLPQDAESYVHRIGRTGRANKEGKAYTLVTPREYIV 355 Query: 368 LPAIE 372 L IE Sbjct: 356 LKQIE 360 >UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL73_AKKM8 Length = 423 Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 152/426 (35%), Positives = 225/426 (52%), Gaps = 23/426 (5%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + F + L ++ LE + TPIQA +PL L +D+ G AQTGTGKT AF Sbjct: 1 MVSTTFRELGLSAPILRQLENLEYKTPTPIQAACIPLLLQNKDLMGLAQTGTGKTAAFAL 60 Query: 66 STFHYLLSHPAIADRKVNQP----RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 L ++R P RALI++PTRELA QIH + A L + +GG Sbjct: 61 PLIQQL------SERSGKPPGRRVRALILSPTRELAAQIHENIRAYARGLHLSTAVIFGG 114 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 GY Q K L G+DIL+ T GRLID+ ++ ++L ++ ++LDEAD M D+GF ++ Sbjct: 115 VGYASQFKELAGGLDILVATPGRLIDHLERRTVSLDGVETLILDEADHMLDMGFAPALKK 174 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + ++P +R +FSAT+ +R+LA + E + V P T R+++ L ++ Sbjct: 175 IVSKIP--RKRHTQMFSATMPDNIRQLAQTLLQKPETVRVSPPSSTADRVEQFLCMVGSQ 232 Query: 242 EKMRLL--QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 + RLL + L ++E P R +IF T+H + + L+ + + GD +Q +R R+L Sbjct: 233 SEKRLLTLELLKQQELPGRTLIFTRTRHGADRLASFLSGKDYPASAIHGDKSQGRRERML 292 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 EF G +LVATD+AARG+ + V V NYDLP++ E YVHRIGRT RAGA+G +I+L Sbjct: 293 REFRSGKTPVLVATDIAARGIDVKDVRLVINYDLPEEPEVYVHRIGRTARAGAAGQAIAL 352 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT----RPRTGNGPRRTGAPR 415 E + +G +PV A +P LR R R+ + APR Sbjct: 353 CSPEEIRKARNVHKLLGRLLPV-----HASSASVPAELRAVPEARRKRSSPMQEKRSAPR 407 Query: 416 NRRRSG 421 R G Sbjct: 408 REPRKG 413 >UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SERP1688 n=56 Tax=Staphylococcus RepID=Y1688_STAEQ Length = 509 Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 134/352 (38%), Positives = 202/352 (57%), Gaps = 9/352 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 Q F + + K V+ LE GF TPIQ ++P L G D+ GQAQTGTGKT AF Sbjct: 2 QNFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPLI 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ + ++LI+APTRELA+Q+ ++ +++ +GG ++Q+ Sbjct: 62 EKVVGQQGV--------QSLILAPTRELAMQVAEQLREFSKGQKVQVVTVFGGMPIERQI 113 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L+ G I++GT GR+ID+ + + I ++LDEAD M ++GFI D+R++ ++P Sbjct: 114 KALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIP- 172 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 A QR MLFSAT+ ++EL + M + I+ + + +I E EK Sbjct: 173 AEQRQTMLFSATMPKAIQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFT 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ P+ AI+F TK R +E+ L + G++ L GD+ Q KRL +L +F +D Sbjct: 233 NFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQID 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 ILVATDVAARGL I V+HV+N+D+P D E Y HRIGRTGRAG G +++ Sbjct: 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 >UniRef50_A0KZD5 DEAD/DEAH box helicase domain protein n=22 Tax=Alteromonadales RepID=A0KZD5_SHESA Length = 487 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 151/375 (40%), Positives = 212/375 (56%), Gaps = 11/375 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF L ++ A+ + G+ T +Q +PL L G+D+ AQTGTGKT +F Sbjct: 23 KFDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLE 82 Query: 70 YLLSHPAIADRKVNQP--RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L P ++P RAL+M PTRELA+Q+ A+ + ++ LK YGG + Q Sbjct: 83 QLSKQPN------DKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQ 136 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 K +E GVDIL+ T GRL D Q H++L ++ +V+DEADRM DLGF++DI + R + Sbjct: 137 RKGVEQGVDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLI- 195 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 A + MLFSAT S V++L+ + +N E++ V E T +++ ++ K LL Sbjct: 196 -ATEHQTMLFSATYSDAVKQLSHKMLNQPEWVNV-AENTTASTVEQLVYRVDKRRKAELL 253 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+ + ++FA+TK E + L DG G+ GD Q R R+LD+F G L Sbjct: 254 SELVGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKL 313 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVAARGL I A+ V N +LP EDYVHRIGRTGRAG SG +IS Sbjct: 314 RVLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEM 373 Query: 368 LPAIETYIGHSIPVS 382 L IE IG ++PV+ Sbjct: 374 LAEIEALIGQTLPVT 388 >UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVQ9_SYNWW Length = 530 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 139/374 (37%), Positives = 221/374 (59%), Gaps = 10/374 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ + F L +++ +++KGF TPIQ ++P+ +AG D+ GQAQTGTGKT +F Sbjct: 1 MSFENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + ++ + +AL++ PTRELAVQ+ + L+ +++ YGG + Sbjct: 61 PILNRVIKGEGL--------QALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIE 112 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 QL+ L +I++GT GRL+D+ + I+L ++ VVLDEAD M D+GF+ DI+ + + Sbjct: 113 LQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQ 172 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P +R LFSATL VREL + M E I +E ++T I++ + ++ K+ Sbjct: 173 CP--RERQTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQVNSRRKIE 230 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L +I+ + P ++IF TK +E+ L + G+ L GD++Q++R ++ F +G Sbjct: 231 TLCRIIDAQQPPISLIFCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVMHGFRQG 290 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 + ILVATD+AARGL I VTHVFN+D+P+D + Y+HR+GRTGRAG SG +I+L Sbjct: 291 NTKILVATDLAARGLDIELVTHVFNFDIPEDLDSYIHRVGRTGRAGRSGIAITLVEPTQI 350 Query: 366 LNLPAIETYIGHSI 379 L IE + G I Sbjct: 351 RLLRMIERHTGKRI 364 >UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 Tax=Firmicutes RepID=CSHA_BACLD Length = 487 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 141/364 (38%), Positives = 213/364 (58%), Gaps = 13/364 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F DF L + +A+++ GF TPIQA +PL LA +DV GQAQTGTGKT AF Sbjct: 5 FQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAF------- 57 Query: 71 LLSHPAIADRKVNQP--RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 P + P +A+++APTRELA+Q+ + + + ++ YGG +Q+ Sbjct: 58 --GIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQI 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ I++GT GRL+D+ + + L + VVLDEAD M ++GFI+DI + +P Sbjct: 116 RALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPA 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +Q L LFSAT+ ++ +A M N E+++V+ ++ T I++ +K L Sbjct: 176 EHQTL--LFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLT 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L++ + P+ AI+F TK R +E+ L G+ + GD+ Q KR+ L +F +G ++ Sbjct: 234 RLLDIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIE 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGL I VTHV+N+D+P D E YVHRIGRTGRAG +G +++ L Sbjct: 294 VLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDML 353 Query: 369 PAIE 372 AIE Sbjct: 354 RAIE 357 >UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Bacteria RepID=A5UZK3_ROSS1 Length = 467 Score = 257 bits (656), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 157/416 (37%), Positives = 219/416 (52%), Gaps = 31/416 (7%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F F HP++ + G+H TPIQ +P L GRDV G AQTGTGKT AF+ Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L+ P + RA+I+ PTRELA QI E L + TGL+ YGG GY Q++ Sbjct: 62 RLMRGPR------GRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQ 115 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV+I + GRL+D+ ++ + L + +++LDEAD+M+D+GF+ D+R + R P Sbjct: 116 RLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAP-- 173 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEV---EPEQKTGHRIKEELFYPSNEE-KMR 245 QR MLFSAT+ +R LA E + + I++ P H I YP E K Sbjct: 174 AQRQTMLFSATMPDAIRALAREALREPQTIQIGRSAPVSTVTHAI-----YPVAEHLKTA 228 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL L+ +IF TKHR + + LA G+R L G+++Q +R LD F G Sbjct: 229 LLIELLRHTDTGSVLIFTRTKHRAQHLSDTLARMGYRATALQGNMSQNRRQAALDGFRSG 288 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 ILVATD+AARG+ + ++HV NYD+P E Y HRIGRTGRA +G + +L Sbjct: 289 RYQILVATDIAARGIDVAHISHVINYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRSDT 348 Query: 366 LNLPAIETYIG-----HSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 + AIE IG ++P Y+ A D R+ + PR PR+ Sbjct: 349 GMVRAIERLIGEPLKRETVPGFDYHAAAPAHDA---------RSDHAPRHHAMPRH 395 >UniRef50_C1D891 Putative ATP-dependent RNA helicase protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D891_LARHH Length = 520 Score = 257 bits (656), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 148/416 (35%), Positives = 228/416 (54%), Gaps = 15/416 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ L ++V ALE+ TP+QA ALPL L+GRD+ AQTGTGKT AFL Sbjct: 6 FAALGLDARLVHALEQHNITTPTPVQAEALPLLLSGRDLMASAQTGTGKTAAFLLPALSR 65 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQLK 129 LL P R PR L++APTREL Q+ A+ + + + + GG + Q + Sbjct: 66 LLVEPVARSRG---PRILVLAPTRELVQQVAKAAQEFSTKIPRVNVASVIGGTSFRTQNQ 122 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 +L +++++ T GRL+D + I+ ++++VLDEADRM D+GF +D+ + ++P A Sbjct: 123 MLTRPIEVMVATPGRLMDQMRSGRIDFSRLEMLVLDEADRMLDMGFSEDVMEIASQLPKA 182 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEE-LFYPSNEEKMRLLQ 248 Q F+AT++ RV + A E + IE+ + I+++ +F + K RL++ Sbjct: 183 RQ--TAFFTATMTRRVLDFADELLTEPAKIEIAAQTAKHENIEQQAIFVDDIDHKRRLVR 240 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ + +AI+F TK C+ + L DG R L GD+ Q+ R R L G + Sbjct: 241 HILSQPDVKQAIVFVATKRDCDTLADELIVDGIRADALHGDMQQRDRTRTLTRLRSGQTE 300 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARG+ + ++HV N+DLP EDYVHR+GRTGRAGA+G ++SL + A L Sbjct: 301 VLVATDVAARGIDVAGISHVINFDLPRFAEDYVHRVGRTGRAGATGTAVSLVGRQDAFPL 360 Query: 369 PAIETYIGHSIPVS-------KYNPD-ALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 IE + G + V+ ++ P + +PR GNG R+ R+ Sbjct: 361 KKIERFTGQKLIVTEIEGMIARFKPQERREGGGGRGGFGGKPRHGNGQGRSYGDRS 416 >UniRef50_C8W8S2 DEAD/DEAH box helicase domain protein n=2 Tax=Atopobium RepID=C8W8S2_ATOPD Length = 450 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 149/401 (37%), Positives = 218/401 (54%), Gaps = 30/401 (7%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 E F++ L+ +++ + GF TP+Q A+P LAG+DV AQTGTGKT AF+ T Sbjct: 2 EITFAELGLNEQILAGVTTLGFSVPTPVQTAAIPAVLAGKDVVASAQTGTGKTAAFMLPT 61 Query: 68 FHYLLSHP------------------AIADRKVNQ--------PRALIMAPTRELAVQIH 101 + A+A+R + PRALI+ PTRELA QI Sbjct: 62 LQRIAVEKHDKAEKPDGKRNAAAERNAVAERNAKRGTGKRNAYPRALIVTPTRELAAQID 121 Query: 102 ADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQV 161 A+ + +TG + + GG Y Q+ L+ G D+L+ T GRLID + H +L IQV Sbjct: 122 NVAKSVCASTGQQAVIVTGGAHYKHQIAALQKGCDVLVATPGRLIDLLDKKHTSLEDIQV 181 Query: 162 VVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEV 221 +VLDEADRM D+GF + + ++P A+Q L LFSATL + + + E IE+ Sbjct: 182 LVLDEADRMLDMGFWPSVHRIMEQLPKAHQTL--LFSATLPASITSTIDALLKDPERIEI 239 Query: 222 EPEQKTGHRIKEELFYPSNEEKMRLLQTLIE--EEWPDRAIIFANTKHRCEEIWGHLAAD 279 +T I++ L + +K +LL+ LI+ + P+R ++F TK R + I+ +L A Sbjct: 240 ARTGQTAATIEQHLCSVTQGQKPQLLKALIDSFDPAPERVLVFCRTKSRVDSIYKNLKAA 299 Query: 280 GHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCED 339 G +V ++ D QK R + LD F + ILVATDV +RG+ I + V N+D+P D ED Sbjct: 300 GLKVDVMHADRPQKARAKALDRFRSASIQILVATDVMSRGIDIQGIDVVINFDVPLDPED 359 Query: 340 YVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIP 380 YVHRIGRTGRAGA+G + + + L IE + +P Sbjct: 360 YVHRIGRTGRAGATGQAYTFMGPDEVTPLREIEYFTKALVP 400 >UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Euryarchaeota RepID=A6VJ89_METM7 Length = 546 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 139/353 (39%), Positives = 209/353 (59%), Gaps = 10/353 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAG-RDVAGQAQTGTGKTMAFLTST 67 + F + L ++++ALEKKGF N TPIQ A+P+ + G RDV GQAQTGTGKT AF Sbjct: 2 ESFKNLGLSDEIIKALEKKGFTNPTPIQEQAIPILIEGKRDVVGQAQTGTGKTAAFGIPI 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + D +ALI+APTRELA+Q+ + + + + L + YGG D+Q Sbjct: 62 LETI-------DESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L+ GV I++GT GR++D+ + I L + VVLDEAD M ++GFI D+ + + + Sbjct: 115 IRELKRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSV- 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 + ++ +LFSATL + +LA M + I+V+ +Q T + + + +K LL Sbjct: 174 -STEKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSYYEIHSRDKFELL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I+ E +IF TK +EI L G+ L GD+ Q +R + LD+F + Sbjct: 233 SRIIDVEKEFYGLIFCKTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLDKFKARKI 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 ++LVATDVAARG+ I +THV NYD+P + E YVHRIGRTGRAG G++++ Sbjct: 293 NVLVATDVAARGIDINDLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFV 345 >UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria RepID=Q2NB74_ERYLH Length = 492 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 161/433 (37%), Positives = 223/433 (51%), Gaps = 34/433 (7%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 +T F L V++AL+ KG++ TPIQA A+P L GRD+ G AQTGTGKT AF+ Sbjct: 1 MTITTFDQLGLSQPVLQALDMKGYNEPTPIQAQAIPPVLEGRDLLGIAQTGTGKTAAFML 60 Query: 66 STFHYLLSHPAIADRKV--NQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 + L AD + R L++APTRELA QI A+ GLK+ GG Sbjct: 61 PSIDRLRE----ADNQTPFKSCRMLVLAPTRELAGQIAQSAKDYGAMAGLKVHSIVGGTS 116 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 K L G DIL+ T GRL+D Q L A++++VLDEAD+M DLGFI +R + Sbjct: 117 VGKDRNKLHRGTDILVATPGRLLDLIDQKAFKLNAVEILVLDEADQMLDLGFIHALRQIN 176 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 +P +R + FSAT+ +++EL + N + V P T RI + LF +EK Sbjct: 177 DLVP--AERQTLFFSATMPKQIQELVGKYCRNPVKVSVTPAATTAERIDQYLFMVQQDEK 234 Query: 244 MRLLQTLIEEEWP-----DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 L++ +++ +R ++F TKH + + L G + G+ +Q +R R Sbjct: 235 QALIEMILKGRHAVPGKQERILVFTRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRA 294 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 LDEF R IL+ATDVAARG+ IP V+HV NY+LP+ E YVHRIGRT RAG G +I+ Sbjct: 295 LDEFKRAKTPILIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIA 354 Query: 359 LACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL----------TRPRTGNGP 408 E+ L I+ N DA LP P R + GP Sbjct: 355 FCAEDERAYLKDIQK-----------NTDAEFDRLPLPENFRAVVEGVGPTKREQKQRGP 403 Query: 409 RRTGAPRNRRRSG 421 R P+ R++ G Sbjct: 404 RIKPKPKARKQGG 416 >UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D2QGG1_9SPHI Length = 485 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 142/380 (37%), Positives = 217/380 (57%), Gaps = 2/380 (0%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +FS+ +L +++AL ++G+ N TPIQ A+P+ L+ RD+ G AQTGTGKT AF Sbjct: 2 QFSELSLIDPILKALTEEGYTNPTPIQEKAIPILLSRRDLLGCAQTGTGKTAAFAIPILQ 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + + + + LI+ PTRELA+QI ++ + +GG Q+ Sbjct: 62 LLSEERSKSTGGPRRIKTLILTPTRELAIQIAESFTAYGRHLNIRNTVIFGGVSQHSQVN 121 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L++GVD+LI T GRL+D Q I+L +Q VLDEADRM D+GFI D++ + ++P Sbjct: 122 TLKAGVDVLIATPGRLLDLMNQGFISLRDVQFFVLDEADRMLDMGFIHDVKKVITKLP-- 179 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 R ++ FSAT+ V +LA +NN +EV P T I++ +++ E+K +LL Sbjct: 180 THRQSLFFSATMPPDVAKLADTILNNPAKVEVTPVSSTADTIEQAMYFVGKEDKRKLLVH 239 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +++++ A++FA TKH +++ L G + G+ +Q R R L F + + Sbjct: 240 ILDDKNIKSALVFARTKHGADKVVKDLLKAGIGAEAIHGNKSQNARQRALSNFKSRETRV 299 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATD+AARG+ + ++HV NY+LP+ E YVHRIGRTGRAG G ++S E L Sbjct: 300 LVATDIAARGIDVDELSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCDAEETEYLR 359 Query: 370 AIETYIGHSIPVSKYNPDAL 389 I IG +PV +P L Sbjct: 360 DIHKLIGKRVPVIDNHPYVL 379 >UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales RepID=C5PZD1_STAAU Length = 517 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 133/358 (37%), Positives = 205/358 (57%), Gaps = 9/358 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 K + Q F + + V++LE GF TPIQ ++P L G D+ GQAQTGTGKT A Sbjct: 7 KRRIILQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGA 66 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F ++ + ++LI+APTRELA+Q+ + G+++ +GG Sbjct: 67 FGIPLIEKVVGKQGV--------QSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGM 118 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 ++Q+K L+ G I++GT GR+ID+ + + I ++LDEAD M ++GFI D+R++ Sbjct: 119 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 178 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++P A QR MLFSAT+ ++ L + M + + I+ + + +I+E E Sbjct: 179 MDKIP-AVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELE 237 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K ++ P+ AI+F TK R +E+ L + G++ L GD+ Q KRL +L +F Sbjct: 238 KFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKF 297 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 ++ILVATDVAARGL I V+HV+N+D+P D E Y HRIGRTGRAG G +++ Sbjct: 298 KNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 355 >UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=Alphaproteobacteria RepID=C6ATS7_RHILS Length = 580 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 150/385 (38%), Positives = 216/385 (56%), Gaps = 5/385 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + ++ L + G TPIQ ++PL L GRD+ G AQTGTGKT AF Sbjct: 25 FESLGVSKPIIATLFQLGIETPTPIQEHSIPLLLEGRDLIGLAQTGTGKTAAFGLPLIEK 84 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 LL+ D + R LI+APTREL QI + + L++ + GG +KQ Sbjct: 85 LLADERRPDNRTT--RTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVSINKQQLQ 142 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 LE G DIL+ T GRL+D + I L A++ +VLDEAD+M DLGF+ D+R + + +P Sbjct: 143 LEKGTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMVP--K 200 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEEL-FYPSNEEKMRLLQT 249 +R MLFSAT+ + +LA E + + +EV P K ++++ + F +K LL+ Sbjct: 201 KRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVAGKNDKTELLRK 260 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 + E RA++F TKH E++ HL G+ V + G+ +Q +R R L F G + Sbjct: 261 SLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHGNKSQGQRERALKAFRDGSIKT 320 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVAARG+ IPAV+HV+NYDLP+ + YVHRIGRT RAG G +I+ + A L Sbjct: 321 LIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDEAKLLR 380 Query: 370 AIETYIGHSIPVSKYNPDALMTDLP 394 IE +G I V+ A ++ P Sbjct: 381 DIERLMGIDITVASGEAPANISGGP 405 >UniRef50_A6LUG3 DEAD/DEAH box helicase domain protein n=33 Tax=Firmicutes RepID=A6LUG3_CLOB8 Length = 480 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 137/388 (35%), Positives = 220/388 (56%), Gaps = 12/388 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 +F+ F + ++++++E G+ N + +Q +P L +D+ ++QTG+GKT AF Sbjct: 3 NEFTKFKISDEILKSIEGLGYKNPSKVQEKVIPEILLNKDIIVKSQTGSGKTAAFGIPLC 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + D N P+ L++ PTRELAVQ+ D + +K +G + +Q Sbjct: 63 EKV-------DWNENIPQILVLTPTRELAVQVSEDITNIGRFKRIKSVSIFGKEPISEQE 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ +++GT GR++D+ + +NL I+ V+DEAD M ++GFI + + RR+P Sbjct: 116 RKLKQKTHVVVGTPGRILDHIDRGSLNLAQIKYFVIDEADEMLNMGFIGQVEGIIRRLPK 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +++ MLFSAT+ ++ L + MN I + ++ I L+Y + EEK+ L Sbjct: 176 --KKVTMLFSATIPEEIKVLCDKYMNKPVDISINNQKLINENIDHNLYYTNYEEKIEKLN 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ E P+ +IFA TK + ++ L + G+ V + G + QK+RL I+D F GD Sbjct: 234 DILITEKPETVVIFAKTKENVDTVFQWLKSKGYSVNRIHGGMLQKERLSIMDGFRLGDFR 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILV+TD+A+RG+ + +THV NYDLP + E YVHRIGRTGRAG G +IS E L Sbjct: 294 ILVSTDLASRGIDVKGITHVINYDLPVEKEAYVHRIGRTGRAGEKGKAISFCVNEKDKLL 353 Query: 369 PAIETYIGHSIPVSKYN-PDALMTDLPK 395 IE +IG IPV YN P+ +M + K Sbjct: 354 SEIEEFIGFKIPV--YNLPEKIMVEKEK 379 >UniRef50_C4K3R7 ATP-dependent RNA helicase n=4 Tax=Enterobacteriaceae RepID=C4K3R7_HAMD5 Length = 454 Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 144/378 (38%), Positives = 214/378 (56%), Gaps = 21/378 (5%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F +F L P ++ ALE KG+ + T IQ +P + GRD+ G A TGTGKT+AFL + Sbjct: 6 FCEFDLDPCLLRALEDKGYLSATAIQTTVIPKAMEGRDLLGSAPTGTGKTIAFLIPALQH 65 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+ P +K PR LI+APTRELA+Q+ A LA+ T LK+ GG Y ++ Sbjct: 66 LIDFP---KKKPGPPRILILAPTRELAIQVADQATELAKYTSLKVAKITGGVAYMNHTEI 122 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI-------RWLF 183 + DIL+ TTGRL+ Y K+ + + A+++++LDEADRM D+GF +DI RW Sbjct: 123 FSTNQDILVATTGRLLQYIKEENFDCRAVEILILDEADRMLDMGFAQDIEVISAETRW-- 180 Query: 184 RRMPPANQRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-E 241 ++ +LFSATL S +RE + + + Y+E P + +I + + N Sbjct: 181 -------RKQTLLFSATLESATIREFSERVLRDPIYLEAAPSVRERKKILQSYYRSDNLP 233 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K+ LL L++ ++IIF T+ + E+ L ++G G L G++ Q KR + Sbjct: 234 HKIALLCYLLKTPSVQKSIIFVRTREKVHELVHRLQSEGIHSGYLEGEMVQTKRTEAIAR 293 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 G + +LVATDVA+RGL I ++HVFN+D+P + Y+HRIGRT RAG G +ISL Sbjct: 294 LNSGRIQVLVATDVASRGLDIEDISHVFNFDMPYTGDVYLHRIGRTARAGRKGTAISLIE 353 Query: 362 EEYALNLPAIETYIGHSI 379 L L +E Y+ +I Sbjct: 354 AHDHLLLKKVERYLKKTI 371 >UniRef50_B1ZXI6 DEAD/DEAH box helicase domain protein n=3 Tax=Verrucomicrobia RepID=B1ZXI6_OPITP Length = 594 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 138/367 (37%), Positives = 216/367 (58%), Gaps = 10/367 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + ++ F++ L P+++ A++K GF PIQA +P L GRDV G + TG+GKT+AF Sbjct: 1 MEKRPFAELGLSPEILRAVDKMGFEEAAPIQAAVIPTVLGGRDVVGVSSTGSGKTVAFAI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLA-YGGDGY 124 + D K+ + L++ PTRELAVQ+ + LA+ +G+ YGG Y Sbjct: 61 PALERV-------DPKLRAVQVLVLCPTRELAVQVAEEMGHLAQFKRGIMGVPIYGGQSY 113 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 ++Q + L +G ++IGT GR++D+ ++ + LGA+++VVLDEADRM D+GF +DI + Sbjct: 114 ERQYRALAAGSQVVIGTPGRVMDHMERGTLKLGALKLVVLDEADRMLDMGFREDIEKILS 173 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P Q L FSAT+ ++EL + +I++E + ++++ F K+ Sbjct: 174 AVPVPRQLL--FFSATMPRPIQELIKRTARDPAWIKIEAVAQNAPQVEQIYFEVDRRSKL 231 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L LI+ I+F +TK +++ HL A G+ V L GD++Q +R R++D+F R Sbjct: 232 EALTRLIDVHDFRYGIVFCSTKVMVDDLDEHLHARGYAVDRLHGDLSQTQRDRVMDKFRR 291 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 + L+ATDVAARGL + + VFNYDLP+D EDY HRIGRTGRAG SG + + + Sbjct: 292 RGFEFLIATDVAARGLDVDDLEVVFNYDLPNDAEDYTHRIGRTGRAGKSGRAFTFVSGQE 351 Query: 365 ALNLPAI 371 L A+ Sbjct: 352 IYKLQAM 358 >UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria RepID=A6T3R2_JANMA Length = 778 Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 145/372 (38%), Positives = 208/372 (55%), Gaps = 10/372 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L ++ L++ G+ + +PIQA +PL L RDV GQAQTGTGKT +F Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQLK 129 + D K P+AL++APTRELA+Q+ + A G + YGG Y QL Sbjct: 69 I-------DIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLS 121 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV +++GT GR+ID+ ++ ++L I+ +VLDEAD M +GFI D+ + ++ P + Sbjct: 122 ALRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPES 181 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q LFSAT+ ++ +A + + + I V + T I++ + S +K+ L Sbjct: 182 RQ--TALFSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRYWLVSGMQKLDALTR 239 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E E D IIFA TK EE+ L A G + GD+ Q++R R + + G +DI Sbjct: 240 ILEAENFDGMIIFARTKLGTEELASKLQARGFSAAAINGDIQQQQRERTIQQLKDGKIDI 299 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL + ++HV NYD+P D E Y HRIGRTGRAG SG +I L Sbjct: 300 LVATDVAARGLDVERISHVINYDVPHDPESYTHRIGRTGRAGRSGEAILFIAPRERNLLK 359 Query: 370 AIETYIGHSIPV 381 AIE I V Sbjct: 360 AIERATRQPISV 371 >UniRef50_Q31EF0 ATP-dependent RNA helicase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EF0_THICR Length = 401 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 150/375 (40%), Positives = 219/375 (58%), Gaps = 8/375 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L PK++ A+E++ +H TPIQA A+P L +DV A TGTGKT AF+ + Sbjct: 3 FEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQF 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 LL P R +PR LI+APTRELA QIH + L + + GG DKQL++ Sbjct: 63 LLDDP----RPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEI 118 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+S +DIL+ T GRL++ + I+L I+++++DEADRM D+G D+ L +P Sbjct: 119 LQSKIDILVATPGRLLNIMSKEFIDLSDIELLIIDEADRMLDMGQGPDVLALIEAIPGDF 178 Query: 191 QRLNMLFSATLSYR-VRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLLQ 248 Q FSATL+ + + A E +++ E I+V + +I++ ++ +++ K LL+ Sbjct: 179 QA--ACFSATLAGSGITKFAEEVLDSPEIIQVNAPNEKSEQIQQWVYLANDKAHKKALLK 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E+E AI+F N K R E+ L + +L GD Q KRL +F +G + Sbjct: 237 AILEDETCQSAIVFCNKKDRAIELADWLQNEHISSTVLHGDFIQAKRLEKTQKFKQGKIK 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGL I VTHV NYD+P + Y+HRIGRTGRA G +I+L NL Sbjct: 297 VLVATDVAARGLDILNVTHVINYDVPYRGDIYIHRIGRTGRAQQVGIAINLVERHDITNL 356 Query: 369 PAIETYIGHSIPVSK 383 IE ++ S+PVSK Sbjct: 357 QRIEYHLQQSLPVSK 371 >UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Prochlorococcus marinus RepID=Q31AC4_PROM9 Length = 593 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 140/352 (39%), Positives = 199/352 (56%), Gaps = 10/352 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 E F DF + ++ +L KG+ N TPIQ A+P + GRD+ GQAQTGTGKT AF Sbjct: 49 NENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALP 108 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYD 125 L AD K + L+M PTRELA Q+ + + E+T K YGG Y Sbjct: 109 LIEKL------ADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYR 162 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L+ VD+++GT GR++D+ +Q + +I +VLDEAD M ++GF++DI W+ + Sbjct: 163 NQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQ 222 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P Q + LFSAT+ +R +A + +N+ I ++ +K I ++ Y K+ Sbjct: 223 LPKNKQMV--LFSATMPNEIRNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLD 280 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ ++E + IIF TK I L GH V +L GD+ Q +R +D +G Sbjct: 281 ALKRILELN-NEGVIIFVRTKLLTTSIAEALENLGHSVAVLNGDIPQNQRENTVDRLKKG 339 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 +DILVATDVAARGL + + V NYD P D E Y HRIGRTGRAG SG +I Sbjct: 340 FIDILVATDVAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAI 391 >UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms RepID=Q2NEZ7_METST Length = 583 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 143/366 (39%), Positives = 218/366 (59%), Gaps = 10/366 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF D + P++ +A+ GF +PIQ+LA+P LA +DV GQAQTGTGKT AF Sbjct: 5 KFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLE 64 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQL 128 + D + N +A+I+ PTRELA+Q+ + L+ + + YGG D+Q+ Sbjct: 65 NI-------DSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQI 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L+ GV I+IGT GR++D+ + ++L I+ V+LDEAD M D+GF +DI ++ +P Sbjct: 118 KALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPY 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 Q L LFSATL + +LA N E ++V + T ++++ F + K+ LL Sbjct: 178 ERQFL--LFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKLELLS 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L++ D +++F NTK + +++ HL G+ L GD+ Q +R R++ +F +G+++ Sbjct: 236 RLLDLHDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIE 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARG+ + V VFN+D+P+D E YVHRIGRTGRAG +G + S L Sbjct: 296 ILVATDVAARGIDVGGVEAVFNFDIPNDNEYYVHRIGRTGRAGKTGKAYSFVSGREIYQL 355 Query: 369 PAIETY 374 I+ Y Sbjct: 356 RDIQRY 361 >UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pneumophila RepID=Q5ZT20_LEGPH Length = 589 Score = 254 bits (650), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 148/370 (40%), Positives = 209/370 (56%), Gaps = 10/370 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS F + +ALE F +PIQA +PL L GRD AQTGTGKT AF Sbjct: 8 FSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQN 67 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQLK 129 L P I+ +ALI+APTRELA+Q+ E L++ + + + GG Y +QLK Sbjct: 68 L--SPEIST-----TQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLK 120 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L SG +++GT GR++D+ + + L ++ +LDEAD M +GFI+D+ + ++P Sbjct: 121 QLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEK 180 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q LFSAT+ YR+R++A +N+ IE+ E T I++ + S +K L Sbjct: 181 KQM--ALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQKPDALIR 238 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E E I+F TK EE+ L G R + GD+ Q R RI+ +F +G +DI Sbjct: 239 VLEVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDI 298 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL + VTHV NYD+P D E YVHRIGRTGRAG SG +I + + + Sbjct: 299 LVATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTPKESRLIS 358 Query: 370 AIETYIGHSI 379 +IE + I Sbjct: 359 SIERHTRQRI 368 >UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B0TII3_HELMI Length = 540 Score = 254 bits (650), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 138/351 (39%), Positives = 211/351 (60%), Gaps = 11/351 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF + L PKV +A+ GF +PIQA A+P+ + G+D+ GQAQTGTGKT F Sbjct: 19 KFGEIELSPKVAKAIFDMGFEEPSPIQAKAIPVIMQGKDLIGQAQTGTGKTATFGIPMAE 78 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + + + +AL++ PTRELA+Q+ + + LK YGG D+Q++ Sbjct: 79 TL-------NPRDGRVQALVLCPTRELAIQVAQEISKIGRQNDLKALPVYGGQSIDRQIR 131 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV ++IGT GR++D+ + + L +++VVLDEAD M D+GF++DI + + P Sbjct: 132 ALRYGVQVVIGTPGRILDHLSRKTLRLNNVRMVVLDEADEMLDMGFVEDIEAILKETP-- 189 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLLQ 248 +R +LFSAT+ +++LA + M E++ + ++ T I E+++Y E +K+ L Sbjct: 190 EERQTLLFSATMPGPIQQLARQYMKEPEFVTISRDKLTVPLI-EQVYYECKESQKVDALC 248 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ E +IIF TK +E+ L G+ L GD+ Q +R R++ +F G + Sbjct: 249 RILDMEEIGSSIIFCRTKRGVDELVAALETRGYFAEGLHGDLTQAQRDRVMKKFRDGKAE 308 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 +L+ATDVAARGL + VTHV NYD+P D E YVHRIGRTGRAG G +I+L Sbjct: 309 LLIATDVAARGLDVENVTHVINYDIPQDPESYVHRIGRTGRAGRKGIAITL 359 >UniRef50_C1XGK2 ATP-dependent RNA helicase DbpA n=2 Tax=Meiothermus RepID=C1XGK2_MEIRU Length = 556 Score = 254 bits (650), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 146/350 (41%), Positives = 203/350 (58%), Gaps = 10/350 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +FS F L P+V +A++ KGF TPIQA A+PL L G+DV GQA+TGTGKT+AF + Sbjct: 2 EFSAFTLRPEVAQAIQAKGFTTATPIQAAAIPLALEGKDVLGQARTGTGKTLAFGIPIAN 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + A + PRALI+ PTRELA+Q+ + E LA L + YGG GY KQ + Sbjct: 62 RLDA----ARERGRAPRALILTPTRELALQVAKELEWLA--PHLTITPIYGGTGYGKQAE 115 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ G D+++ T GR IDY +Q ++L I++ VLDEAD M +GF + + L PP Sbjct: 116 ALKRGTDVVVATPGRAIDYLEQRVLDLSRIEIAVLDEADEMLSMGFEEAVEQLLEATPPT 175 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q +LFSATL R L+ A +I V ++ + +E ++ +L Sbjct: 176 RQ--TLLFSATLPTWARRLSERYQKAAIHINVIKDEAISY--EEVAIQAPIHNRLSVLSD 231 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ P+R I+F +TK C ++ L + H + GD+ Q R R+++ F G + + Sbjct: 232 LLFAYAPERTIVFTSTKAECNDLALGLESRAHSAAPIHGDMGQIDRERVMERFRSGAVSV 291 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 LVATDVAARGL IP V V +Y LPD E Y+HR GRTGRAG SG + L Sbjct: 292 LVATDVAARGLDIPEVDLVVHYRLPDQNESYLHRSGRTGRAGRSGKVVIL 341 >UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alphaproteobacteria RepID=Q28T45_JANSC Length = 644 Score = 254 bits (649), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 152/387 (39%), Positives = 220/387 (56%), Gaps = 15/387 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L+PKV +A+ + G+ + TPIQA A+P LAGRDV G AQTGTGKT +F Sbjct: 13 FADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITM 72 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L A + PR+L++ PTRELA Q+ + + A+ L L GG + +Q + Sbjct: 73 LARGRA----RARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQA 128 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 ++ GVD+LI T GRL+D+ ++ + L ++V+V+DEADRM D+GFI DI +F +P Sbjct: 129 IDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLVP--F 186 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF---YPSNEEKMRLL 247 R + FSAT++ + + ++N E IEVE + T I++ L P + + ++ Sbjct: 187 TRQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRDAQAKMK 246 Query: 248 QTLI------EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 + ++ E + AIIF N K + + L + GD+ Q R+R L Sbjct: 247 RDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHRMRTLAG 306 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +LVA+DVAARGL IP V+HV NYD+P EDYVHRIGRTGRAG +G +I+L Sbjct: 307 FRDGSITLLVASDVAARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGVAITLCV 366 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDA 388 L AIE I IP ++ DA Sbjct: 367 PSDEKYLGAIEGLIKQPIPRAEAPMDA 393 >UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria RepID=C3RH47_9MOLU Length = 418 Score = 254 bits (649), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 205/367 (55%), Gaps = 10/367 (2%) Query: 33 TPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPR---ALI 89 +PIQ A+P ++GRD+ G A+TGTGKT AF L + D PR ALI Sbjct: 7 SPIQEQAIPAIISGRDIFGCAKTGTGKTAAFALPILQKLY----LRDESEKYPRTIKALI 62 Query: 90 MAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYA 149 +APTRELA+QI+ E + LK + +GG Q+ + G+D+LI T GRLID Sbjct: 63 LAPTRELAIQINETFEAMNPQVNLKSAVIFGGVRQGSQVTKINRGIDVLIATPGRLIDLY 122 Query: 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELA 209 Q ++L ++ +VLDEADRM D+GFIKDIR + R +P +Q MLFSATL ++ L Sbjct: 123 NQGLVDLKHVEYLVLDEADRMLDMGFIKDIRKILRFIPRRHQ--TMLFSATLPDEIKHLV 180 Query: 210 FEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRC 269 + +N+ I + T +I + L++ K +LL L+E AI+F TK Sbjct: 181 SDLLNDPLKIMISSGNVTVEKINQSLYFVDKVNKAKLLIKLLENPQIYNAIVFVRTKRNV 240 Query: 270 EEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVF 329 + + L + GD +Q R+R L+ F + +LVA+D+AARG+ I +THV Sbjct: 241 DTLCKKLIKAQITCEGIHGDKSQNARVRALNNFKNDKVRVLVASDIAARGIDIDELTHVI 300 Query: 330 NYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDAL 389 N+DLPD E+YVHRIGRT RAGASG +I+ + L I+ +I IPV NP Sbjct: 301 NFDLPDQAENYVHRIGRTARAGASGEAITFCSFQEKALLKDIQKFINQDIPVVD-NPYYP 359 Query: 390 MTDLPKP 396 M DL P Sbjct: 360 MKDLSIP 366 >UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VX00_DYAFD Length = 590 Score = 253 bits (647), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 142/372 (38%), Positives = 215/372 (57%), Gaps = 10/372 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T T Q F + L+ +++AL++ GF +PIQA +P L G DV GQAQTGTGKT AF Sbjct: 2 TTETFQTFEELGLNENILKALQEMGFEKPSPIQAQGIPAVLQGSDVIGQAQTGTGKTAAF 61 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGD 122 + D N +ALI+ PTRELAVQ+ + L++ G+++ YGGD Sbjct: 62 GIPVLERI-------DTSSNAVQALILCPTRELAVQVSEELGRLSKFMRGVRIEAIYGGD 114 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 D+Q++ L+ GV I++GT GR++D+ ++ + ++++VLDEAD M D+GF +DI + Sbjct: 115 SIDRQIRSLKKGVHIVVGTPGRVMDHMERRTLKFDEVRMMVLDEADEMLDMGFREDIESI 174 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 MP R +LFSAT+S + + +N+ I+V + T I++ F + Sbjct: 175 LADMP--EDRQTILFSATMSKPIMSITKRFLNDPTLIKVVRNELTNQNIEQVYFEVKPQA 232 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K+ ++ LI+ ++F NTK + +EI L G+ + GD+ Q++R ++ +F Sbjct: 233 KVEVMTRLIDMHHIKSLLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKF 292 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G ILVATDVAARG+ + + V NYD+P D E YVHRIGRTGRAG SG + SL Sbjct: 293 KAGVTTILVATDVAARGIDVSGLDGVINYDIPMDEEYYVHRIGRTGRAGMSGKAFSLVAR 352 Query: 363 EYALNLPAIETY 374 + L +IE+Y Sbjct: 353 DEKYRLKSIESY 364 >UniRef50_C9KJK1 ATP-dependent RNA helicase DeaD n=3 Tax=Veillonellaceae RepID=C9KJK1_9FIRM Length = 441 Score = 253 bits (647), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 140/349 (40%), Positives = 200/349 (57%), Gaps = 9/349 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + + P + + L G TP+Q A+PL AG D +AQTGTGKT+AFL Sbjct: 4 FQELGIRPALCDVLRSHGIKEATPVQEKAMPLVRAGHDCIVKAQTGTGKTLAFLLPIIEK 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + A+ +AL++ PTRELA+QI A+ L+ A + + +GG ++Q + Sbjct: 64 IKPQAAVT-------QALVITPTRELAIQIAKVAQSLSAAADISSLVIFGGQDIERQKQK 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L ++IGT GRL+D+ ++ I+L + VVLDEAD M LGFI+D+ L A Sbjct: 117 LRRHPQLIIGTPGRLLDHLRRQTIDLSQVNKVVLDEADEMMRLGFIEDVETLLE--ATAA 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R MLFSAT+ RV+ L+ M + +E++ E T I + + E K+ L + Sbjct: 175 DRQLMLFSATMPDRVKALSARYMTAPQNLEIKSEHVTLDAIDQVIIDTREETKIDKLCEI 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I +E P A++F +TK R + LAA G+ V L GD++Q +R +L F + +L IL Sbjct: 235 INQEQPYLAMVFCHTKQRAHMVTMALAARGYLVDELHGDLSQVQRTLVLKRFRKAELQIL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 ATD+AARGL I VTHVFNYD+P D E Y+HRIGRTGRAG G +I+ Sbjct: 295 CATDIAARGLDIEGVTHVFNYDIPHDAESYIHRIGRTGRAGERGKAITF 343 >UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax=Campylobacter fetus RepID=A0RP33_CAMFF Length = 624 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 149/391 (38%), Positives = 218/391 (55%), Gaps = 9/391 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FSDF L ++EAL++ + T IQ +A+P + G+D+ A+TGTGKT AF Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L S ++K Q R L++ PTRELA Q+ + + A+ K +GG Q++ Sbjct: 63 LSSKER--NKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQA 120 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+SG+DI++ T GRL+D A QN ++L I +V DEADRM+D+GFI DI+ + + +P Sbjct: 121 LKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLP--E 178 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R N+LFSAT V L + + I++E + T I + + ++KM LL + Sbjct: 179 KRQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDKKMELLNEV 238 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 E D+A++F TK ++ +L G V L GD +Q R + L++F G IL Sbjct: 239 FGVESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKIL 298 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARGL I + V N +LP+ EDYVHRIGRTGRAG G +ISL C + L Sbjct: 299 VATDIAARGLDIKELPFVINLELPNVPEDYVHRIGRTGRAGNDGVAISLVCVDEFKFLID 358 Query: 371 IETYIGHSIPVSKYNPDALMTDL---PKPLR 398 IE I + ++ DL P+P+R Sbjct: 359 IEKLIDKKLIRESFS--GFEADLRVKPQPIR 387 >UniRef50_C1I992 DEAD/DEAH box helicase domain-containing protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I992_9CLOT Length = 370 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 139/376 (36%), Positives = 213/376 (56%), Gaps = 11/376 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D ++ K+V+ L+K G T +Q +P + DV G+++TG+GKT+AFL Sbjct: 3 FKDLKINTKLVDELKKNGITTPTKVQVNVIPEIINKNDVIGKSKTGSGKTLAFLLPILQ- 61 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 I D LI++PTRELA+QI +A + + AYGG QLK Sbjct: 62 ------IIDSNSKSTEVLILSPTRELAIQITEEANKF-NINDIGILAAYGGKDVGSQLKK 114 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L G++++I T GRL+D+ ++ INL + VV+DEAD+M +GF +I + P Sbjct: 115 LNKGINLIIATPGRLLDHLERKSINLSKLNTVVIDEADQMLLMGFRNEIEKIMSYAPKKL 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEV-EPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q L FSAT+ +V++LA+ MNN I++ E E+ IK+E+ ++ K+ L Sbjct: 175 QTL--CFSATIDSKVKKLAYRYMNNPTIIDITENEESEIPNIKQEVVKTTDRWKVDALVK 232 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++EE+ P +IIF TK R +E+ LAA G + + DV Q KR +I+ F ++ Sbjct: 233 ILEEDNPFMSIIFCRTKRRADELEVKLAAKGIKAAKIHSDVPQNKREKIMKSFRDCEIQF 292 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVA+RG+ + VTH++NYD P+ E Y+HRIGRT RAG SG++ + + L Sbjct: 293 LIATDVASRGIDVTGVTHIYNYDAPESVESYIHRIGRTARAGDSGYTCLITDPKNYTILE 352 Query: 370 AIETYIGHSIPVSKYN 385 IE Y+ ++IP + N Sbjct: 353 EIENYLQYTIPEREVN 368 >UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=Gammaproteobacteria RepID=B0TQ71_SHEHH Length = 437 Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 150/404 (37%), Positives = 225/404 (55%), Gaps = 18/404 (4%) Query: 26 KKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQP 85 +KG+ T IQA A+P LAGRD+ AQTGTGKT AF L+ + +D + Sbjct: 42 QKGYQQPTAIQAEAIPAILAGRDIMASAQTGTGKTAAFTLPLLQRLIDKSS-SDEQSKAK 100 Query: 86 RA--LIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTG 143 RA L++APTRELAVQ++ + A T + + YGG D Q L +GVD+++ T G Sbjct: 101 RASVLVLAPTRELAVQVNTNVSQYAVNTDVSSIVIYGGVSIDAQATKLAAGVDVIVATPG 160 Query: 144 RLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSY 203 RL+D+ ++ +NL I+ +V DEADRM D+GF+ +I + +++P +R +LFSAT S Sbjct: 161 RLLDHVRRGTLNLSDIEYLVFDEADRMLDMGFMDEINAILKQLPA--KRQTLLFSATFSS 218 Query: 204 RVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFA 263 + EL+ + + IEV+ + I++ ++ +E K LL LI + + ++F+ Sbjct: 219 AIFELSKKLLQKPLRIEVDKANSAANSIEQVVYAVDSERKTELLCHLINKSAWQQVLVFS 278 Query: 264 NTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIP 323 K + I + A G GD+ Q R ++L++F +G + LVATDVAARGL I Sbjct: 279 RKKQTADLIAQKMLAAGIEAKAFHGDLGQGAREQVLNDFKQGKIKALVATDVAARGLDIV 338 Query: 324 AVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIP--- 380 + V NY++P EDYVHRIGRTGRAG +G +I+L E+ AL L +E+ I +P Sbjct: 339 ELKVVVNYEIPFVAEDYVHRIGRTGRAGNTGKAITLYSEDDALLLEEVESVIDKRLPQQW 398 Query: 381 VSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR-----NRRR 419 + + P DL K +TR + R+ R RRR Sbjct: 399 LEGFEP-----DLTKLEPVTRKNSKAAQRQRAKKRALGADKRRR 437 >UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y818_9FIRM Length = 556 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 139/360 (38%), Positives = 213/360 (59%), Gaps = 11/360 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF++ L P++ A+ G+ T IQ+ +P+ + G DV GQ+QTGTGKT AF Sbjct: 2 KFNELNLSPEMSRAIADCGYTEATYIQSACIPVVMNGGDVIGQSQTGTGKTAAFAIPIIE 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQL 128 L + DRK +P+ALI++PTRELA+Q+ + + G++ YGG KQ+ Sbjct: 62 ML----EVTDRK--RPQALILSPTRELAMQVCDEIRKFTKYKEGIRTVAVYGGQQISKQI 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L+ G DI++GT GR++D+ ++ + +V+VLDEAD M ++GF +DI + +P Sbjct: 116 LELKKGADIVVGTPGRVLDHIRRRTLRFDQCRVLVLDEADEMLNMGFREDIETVIEALP- 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 QR +LFSAT+ + E+ + N +I+ Q +I++ + E K +L Sbjct: 175 -QQRQTVLFSATMPKPILEITSQYQTNPVHIKTPQTQINTPKIEQVYYVCPKEAKKEILM 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI + P A+IF NTK +E+ L + G+ L GD+ Q+ R ++D F +G ++ Sbjct: 234 QLISMQNPHLAMIFCNTKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDNFKKGKIN 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL--ACEEYAL 366 ILVATDVAARG+ + ++ VFNYDLP + E YVHRIGRTGRAG G +++L A ++YAL Sbjct: 294 ILVATDVAARGIDVDSMDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLITARQKYAL 353 >UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zymomonas mobilis RepID=C8WFI7_ZYMMN Length = 506 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 140/370 (37%), Positives = 212/370 (57%), Gaps = 6/370 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L ++++A+ + G+ TP+QA A+P L RD+ AQTGTGKT +F+ Sbjct: 17 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID- 75 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +L+H + PR+LI+ PTRELA Q+ + E + L + L GG +Q Sbjct: 76 ILAH---GRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAA 132 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 LE GVD+LI T GRL+D ++ I L + +++V+DEADRM D+GFI DI + ++P + Sbjct: 133 LEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSR 192 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q L LFSAT+ +++LA ++N + IE+ I + L S K + L + Sbjct: 193 QTL--LFSATMPPAIKKLADRFLSNPKQIEISRPATANTLIDQRLIEVSPRSKKKKLCDM 250 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E AIIF N K ++ L G VG + GD++Q +R L+ F G + +L Sbjct: 251 LRAEKDHTAIIFCNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELERFKNGQISVL 310 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VA+D+AARGL + ++HVFN+D+P +DY+HRIGRTGR GASG +++ + A Sbjct: 311 VASDIAARGLDVKGISHVFNFDVPTHPDDYIHRIGRTGRGGASGEALTFVTPADEEAITA 370 Query: 371 IETYIGHSIP 380 IE +G IP Sbjct: 371 IEKLMGVEIP 380 >UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QD85_9SPHI Length = 643 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 141/365 (38%), Positives = 221/365 (60%), Gaps = 10/365 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS A+ P++++A+ GF + +PIQA A+P L GRDV GQAQTGTGKT AF Sbjct: 33 FSSLAISPELLQAVTDMGFISPSPIQAEAIPPILDGRDVIGQAQTGTGKTAAFGIPALDL 92 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQLK 129 + + DR V + LI+ PTRELA+Q+ + + LA+ G+++ YGGD ++Q++ Sbjct: 93 I----DVQDRSV---QTLILCPTRELALQVAEEIKKLAKYKRGIRIEAIYGGDSIERQIR 145 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+SGV I+IGT GR++D+ ++N + L +++++LDEAD M D+GF +DI + MP Sbjct: 146 SLKSGVHIVIGTPGRVMDHMERNTLKLNNVKMMILDEADEMLDMGFREDIESILEEMP-- 203 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSAT+S + ++ + + ++V ++ T I++ F ++ K+ ++ Sbjct: 204 EERQTILFSATMSKPIMQITQKFQKDPVLVKVVKKELTNVNIEQVYFEVKSKAKVEVMCR 263 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI+ ++F NTK + +EI L G++ L GD+ Q +R ++ +F G +I Sbjct: 264 LIDMYDLKLLLVFCNTKRKVDEIVEDLQIRGYQAEGLHGDLRQAQRNNVMSKFRAGTTNI 323 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARG+ + V V N+D+P D E YVHRIGRTGRAG SG + S + Sbjct: 324 LVATDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSFVGRDEKYRFR 383 Query: 370 AIETY 374 I+TY Sbjct: 384 EIQTY 388 >UniRef50_Q30SZ2 DEAD/DEAH box helicase-like protein n=2 Tax=Campylobacterales RepID=Q30SZ2_SULDN Length = 432 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 143/380 (37%), Positives = 215/380 (56%), Gaps = 9/380 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + ++ A++ G+ T IQ A+PL LA DV AQTGTGKT AF Sbjct: 3 FEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L +D K R L++APTREL++QI+ D + A+ G+ + + GG + Q K+ Sbjct: 63 LRK---TSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKI 119 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ GVDI+I T GR++++ + ++L +++ VLDEADRM D+GF+K+IR + +P + Sbjct: 120 LKEGVDIVIATPGRVLEHVDKG-LSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKRH 178 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q +LFSAT S +VR+L+ + +IE + T I + + E+K LL + Sbjct: 179 Q--TLLFSATFSDKVRKLSKLILTKPAFIETSKKNSTVDTINQVAYLVDTEKKAPLLAYI 236 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I + ++F TK + + L DG + G++ GD Q RL+ L+EF G + +L Sbjct: 237 IGSRNFRQVLVFTRTKASADLLVVELKKDGLKCGIIHGDKTQANRLKTLNEFKEGKIKVL 296 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+A+RGL I + V NY+LP EDYVHR+GRTGRAG G +ISL ++ Sbjct: 297 VATDIASRGLDIEELPFVINYELPSIPEDYVHRVGRTGRAGRDGMAISLIDIYEKFDIKD 356 Query: 371 IETYIGHSIP---VSKYNPD 387 IE IG IP ++ + PD Sbjct: 357 IEKLIGMKIPQEIIAGFEPD 376 >UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSA7_BACS4 Length = 528 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 140/371 (37%), Positives = 214/371 (57%), Gaps = 10/371 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF DF + + +A++ GF +PIQ +P L G DV GQAQTGTGKT AF Sbjct: 3 KFEDFQISNDIKKAIKDMGFEAPSPIQEKVIPEILKGHDVIGQAQTGTGKTAAFGIPLLE 62 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + S DR+V ++LI+ PTRELA+Q+ + + L++ ++ YGG Q+K Sbjct: 63 KVTS-----DRQV---QSLILTPTRELAIQVAGELQKLSKFKRSQILPIYGGQSIGHQIK 114 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ GV +++GT GR++D+ + + L ++ ++LDEAD M D+GFI+DI + +++ Sbjct: 115 ALKRGVQVVVGTPGRVLDHLNRKTLQLRSVHTLILDEADEMLDMGFIEDIEKILQQV--N 172 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 R MLFSAT+ +R+L+ + MNN + + + + T I + F + K+ L Sbjct: 173 TNRQTMLFSATMPPPIRKLSNKYMNNPKQVTISKGEVTAPSINQVYFKVLEKNKLDSLCR 232 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +I+ E D IIF TK E+ L A G+ L GD+ Q +R ++ +F ++ Sbjct: 233 VIDSETIDLGIIFCRTKKGVAELTEALQARGYMADGLHGDLTQSQRDIVMKKFRDSSIEF 292 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVAARG+ + V+HV NYD+P D E YVHRIGRTGRAG G +++L +L Sbjct: 293 LIATDVAARGIDVENVSHVINYDIPQDPESYVHRIGRTGRAGREGVAVTLVTPREMKHLR 352 Query: 370 AIETYIGHSIP 380 +IE I +IP Sbjct: 353 SIEAEIKMTIP 363 >UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicase n=5 Tax=Proteobacteria RepID=Q4FSS4_PSYA2 Length = 567 Score = 251 bits (642), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 149/374 (39%), Positives = 216/374 (57%), Gaps = 11/374 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D + ++ ALE+ G+ + TPIQA A+P L GRD+ AQTG+GKT AF+ Sbjct: 46 FTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDR 105 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQLK 129 L S D+ +ALI+ PTRELA Q+H + + GL GG Y+ Q+ Sbjct: 106 L-SRATSFDKLT---KALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQIT 161 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ GV +++ T GRL+D+ ++L +++++VLDEADRM D+GF DI + R P Sbjct: 162 ALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPI- 220 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLLQ 248 R ++ SAT V ++A N E + ++ E + H I+E+++Y + + K RLL Sbjct: 221 -DRQTIMCSATWDGPVGKIAASFTKNPERVSIKVE--SAH-IEEKVYYCDDFDHKNRLLD 276 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ + ++ IIFA TK E++ L GH+ L GD+ Q KR RI+ + G Sbjct: 277 KIVCHKDMEQIIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQDLRNGKCK 336 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL +PA++HV NYDLP EDYVHRIGR GRAG +G +ISL + L Sbjct: 337 ILVATDVAARGLDVPALSHVINYDLPRQTEDYVHRIGRCGRAGRTGVAISLCSMDDRPQL 396 Query: 369 PAIETYIGHSIPVS 382 AI Y+ + S Sbjct: 397 NAINRYLDRKMEAS 410 >UniRef50_D0MH79 DEAD/DEAH box helicase domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MH79_RHOM4 Length = 505 Score = 251 bits (642), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 155/372 (41%), Positives = 207/372 (55%), Gaps = 15/372 (4%) Query: 16 LHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHP 75 L ++ +A G+ P+Q LP L GRDV Q+QTG+GKT AFL F L Sbjct: 45 LPERMQQAARAIGWTELMPVQRRTLPYLLEGRDVIVQSQTGSGKTGAFLLPLFERL---- 100 Query: 76 AIADRKVNQPRALIMAPTRELAVQIHADAEPL----AEATGLKLGLAYGGDGYDKQLKVL 131 D Q +ALI+ PTRELA QI E + + A L+ L YGG Y QLK L Sbjct: 101 ---DPSRGQVQALILTPTRELARQISEAFEQMKTGVSGAQSLRAVLVYGGVRYGPQLKAL 157 Query: 132 ESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQ 191 E G ++IGT GR++D ++ + LGA+QV+V DEAD M +GF +R L R +P + Sbjct: 158 EQGAQVVIGTPGRILDLIERGALRLGALQVLVFDEADEMLSMGFYPAMRQLKRYLP--RE 215 Query: 192 RLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLI 251 R +FSAT+ RV+ LA E + + ++ + ++ I+ F EK R L LI Sbjct: 216 RNTAMFSATMPPRVQALAREFLKDPAFVSLSTDRIAAETIEHRYFIVPPMEKDRALVQLI 275 Query: 252 EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILV 311 E E P+ AIIFANTK E + L G+ +TGD+ QK+R RI+D +G L +LV Sbjct: 276 ELENPESAIIFANTKRDVEYLGQFLKNYGYNADAITGDLPQKQRERIMDRLRKGQLRLLV 335 Query: 312 ATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAI 371 ATDVAARG+ I ++HVF YD+P D E YVHR GRTGR G G +I L L AI Sbjct: 336 ATDVAARGIDISDLSHVFMYDVPQDPEYYVHRSGRTGRVGKEGTTIVLVTPLEEARLRAI 395 Query: 372 ETYIGHSIPVSK 383 + IP+ K Sbjct: 396 ARQ--YDIPLEK 405 >UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1F3_DESAD Length = 493 Score = 251 bits (641), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 140/370 (37%), Positives = 205/370 (55%), Gaps = 9/370 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F+ +++ + G+ TPIQ A+P L GRDV G AQTGTGKT AF Sbjct: 3 FKQFSFDRRIMAGIHACGYETPTPIQTKAIPEVLKGRDVMGLAQTGTGKTAAFALPIMQR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 LL + R L++APTRELA+QIH + L G++ +GG G Q++ Sbjct: 63 LLEKKFSGQGPI---RVLVLAPTRELALQIHENFMELGVEAGIRSAAVFGGVGAMPQIQA 119 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 +++ GRL+D Q I L + +VLDEADRM D+GF+ DIR + ++P Sbjct: 120 ARRS-SVIVACPGRLLDLMNQGVIKLDKVDTLVLDEADRMLDMGFLPDIRKIMSKLP--Q 176 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE-KMRLLQT 249 +R N+LFSAT+ +R+LA + + ++V + E +FYP ++ K LL Sbjct: 177 RRQNLLFSATMPDDIRDLADKILYRPATVQVA--NTAPAKTVEHVFYPVSQHLKNNLLFK 234 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E+ D ++F TKH+ + + LAA GH+ L G+++Q +R R LD F G + Sbjct: 235 VLEQTDYDSLLVFTRTKHKAKNLARRLAARGHKATFLQGNMSQNQRQRALDGFRDGSFKV 294 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 +VATD+AARG+ +THV N D+PD E Y HRIGRTGRAG SG + S + + Sbjct: 295 MVATDIAARGIDCDRITHVVNLDVPDTAETYTHRIGRTGRAGRSGSAFSFVTRDDLRLMR 354 Query: 370 AIETYIGHSI 379 IE +G+SI Sbjct: 355 EIEKAVGYSI 364 >UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=cellular organisms RepID=A2SQE1_METLZ Length = 656 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 135/367 (36%), Positives = 217/367 (59%), Gaps = 10/367 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F++FA+ ++++A+ GF TPIQA+A+P L G+DV GQAQTGTGKT AF Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQ 127 L D +AL+++PTRELA+Q + L + GL + YGG ++Q Sbjct: 65 ERL-------DPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQ 117 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L+ L+ V ++IGT GR+ID+ K+ ++L ++ + +LDEAD+M D+GF +DI +FR P Sbjct: 118 LRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTP 177 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R +LFSAT+ + ++ + +++++ ++ T +I++ +K+ L Sbjct: 178 --KDRQTILFSATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTYIEVRERDKLEAL 235 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 ++ P+ A++F NTK +++ + A G+ V L GD+ Q++R R++ F G + Sbjct: 236 CRTLDMNNPELALVFCNTKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVMARFRSGSI 295 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 D+L+ATDVAARG+ + V VFNYD+P D E YVHRIGRT RAG +G S++ Sbjct: 296 DVLIATDVAARGIDVDDVDIVFNYDVPQDVEYYVHRIGRTARAGRTGKSVTFVAPREIYK 355 Query: 368 LPAIETY 374 L I+ Y Sbjct: 356 LRDIQRY 362 >UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteria RepID=Q8YXJ0_ANASP Length = 513 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 141/350 (40%), Positives = 202/350 (57%), Gaps = 10/350 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + + + VE LEK GF T IQA A+P L+GRDV GQ+QTGTGKT AF Sbjct: 5 FPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILER 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L D + +A+++ PTRELA+Q+H +GL+ YGG D+Q+ Sbjct: 65 L-------DPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQ 117 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ GV I++GT GR+ID ++ ++ L ++ VLDEAD M +GFI D+ + + P Sbjct: 118 LKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAP--Q 175 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFY-PSNEEKMRLLQT 249 R LFSAT+ +R L + + + + VE + T ++I + + P + K R LQ Sbjct: 176 DRQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQVAYLIPRHWTKARALQP 235 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E E P+ A+IF T+ E+ L A GH V GD++Q+ R R+L F + Sbjct: 236 ILEMEDPETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLTRFRSRQVRW 295 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 +VATD+AARGL + ++HV NYDLPD E YVHRIGRTGRAG G +I+L Sbjct: 296 VVATDIAARGLDVDQLSHVINYDLPDSVETYVHRIGRTGRAGKEGTAITL 345 >UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bacteria RepID=Q30PP0_SULDN Length = 540 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 135/376 (35%), Positives = 213/376 (56%), Gaps = 13/376 (3%) Query: 7 TEQK---FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 TE+K F D L +++ +++ GF +PIQA A+P LAGRD+ GQA TGTGKT AF Sbjct: 9 TEEKLITFDDLGLKKEILRSVKDAGFTVPSPIQAAAIPFILAGRDIVGQAHTGTGKTAAF 68 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 + + + + L++ PTRELA Q+ + G + YGG Sbjct: 69 GLPALNNINPNDGVG--------ILVITPTRELATQVSDELFKYGRNIGARTVTVYGGSS 120 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 Y++Q+ +++ G +++ T GRL+D K+N + A +VVLDEAD M D+GF+ DI +F Sbjct: 121 YNRQIDLIQRGASVVVATPGRLLDILKKNLLKDFAPSIVVLDEADEMLDMGFLDDINEIF 180 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 +P + R +LFSAT+ ++ LA ++N E+I + + T I +E + E+ Sbjct: 181 SYLP--SNRQTLLFSATMPKPIKLLAERILDNPEFISITKGETTNTDINQEYYVIEESER 238 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 + L++ E ++I+F TK + + L++ G+ L GD+ Q++R ++ F Sbjct: 239 DDAIIRLMDAEACQKSIVFCRTKSEVDRLSNVLSSAGYLANGLHGDMEQRQRETVIKGFK 298 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 + +LVATDVAARG+H+ ++HVFNY +P D E YVHRIGRTGRAG G +I+L Sbjct: 299 NNGVKVLVATDVAARGIHVDNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLTPL 358 Query: 364 YALNLPAIETYIGHSI 379 L I+T +G ++ Sbjct: 359 EFKELQRIKTKVGTTM 374 >UniRef50_C0AEG7 DEAD/DEAH box helicase domain protein (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEG7_9BACT Length = 606 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 134/354 (37%), Positives = 211/354 (59%), Gaps = 20/354 (5%) Query: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYL 71 ++ L P++++A++K GF +PIQA +PL LAG DV GQ+ TG+GKT AF Sbjct: 1 AELGLSPELLKAVDKMGFEEASPIQAAVIPLLLAGSDVVGQSSTGSGKTAAF-------- 52 Query: 72 LSHPAI--ADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLA----YGGDGYD 125 + PAI D K+ + LI+ PTRELAVQ+ AE + + K G+ YGG Y+ Sbjct: 53 -ALPAIERVDTKLKAVQVLILCPTRELAVQV---AEEVNKLASFKRGVMEVPIYGGQSYE 108 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 +Q + L +G ++IGT GR++D+ ++ + L + +V+LDE DRM D+GF DI + + Sbjct: 109 RQFRALAAGAQVVIGTPGRVMDHMERGTLKLDKLSMVILDECDRMLDMGFRDDIEHILKS 168 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P QR ++ FSAT+ +R++ + N ++++E + ++ ++ + F K+ Sbjct: 169 VP--EQRQSLFFSATMPREIRDMISRFIPNPAWVKIETQMQSAPQVDQVYFEVDRRSKLE 226 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 +L LI+ IIF +TK +E+ +L A G+ L GD+ Q +R R +++F R Sbjct: 227 VLTRLIDLNDFRYGIIFCSTKIMVDELDENLHARGYACDRLHGDITQAQRTRTMEKFKRR 286 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + L+ATDVAARGL + + VFN+DLP+D EDY HRIGRTGRAG G + + Sbjct: 287 GFEFLIATDVAARGLDVDDLEVVFNFDLPNDAEDYTHRIGRTGRAGRKGKAFTF 340 >UniRef50_B8JG82 DEAD/DEAH box helicase domain protein n=8 Tax=Bacteria RepID=B8JG82_ANAD2 Length = 488 Score = 251 bits (640), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 148/376 (39%), Positives = 206/376 (54%), Gaps = 10/376 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L K ++ALE+ GF + TPIQA A+P L GRDV G A TGTGKT AFL Sbjct: 17 FADLNLSEKTLQALERAGFEHPTPIQAQAIPPALGGRDVIGAAATGTGKTAAFLLPIIER 76 Query: 71 LLS-HPAIADRKVNQ-----PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 L PA DR PRAL++APTRELAVQI + + ++ L GG G Sbjct: 77 LGGGAPAPKDRPAAAHGKPGPRALVLAPTRELAVQIAGELDRFGRGRHVRGALVIGGVGM 136 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q L ++++ T GRL+D+ +Q L ++V+VLDEADRM D+GF ++ + Sbjct: 137 GAQSAALRDH-EVIVATPGRLVDHLQQGTARLDGLEVLVLDEADRMLDMGFAPQLKRILA 195 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 R+P Q +LFSAT++ V E A + + +EV R ++ +F P EK+ Sbjct: 196 RVPKVRQ--TLLFSATMAGEVAEFARAHLRDPVRVEVARSGTLAERAEQRVFLPEQREKL 253 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 LL L+EE+ ++F TK R +++ L GH+V + D +Q +R L+ F Sbjct: 254 PLLMALLEEDDLS-TLVFTRTKRRADKVAKALQRAGHKVARIHADRSQAQRRMALEGFRD 312 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G +LVATD+AARG+ + + HV N+DLP EDYVHR+GRT R ASG + + A E Sbjct: 313 GQYRVLVATDIAARGIDVAEIGHVVNFDLPHVPEDYVHRVGRTARMAASGRASAFASPEE 372 Query: 365 ALNLPAIETYIGHSIP 380 L IE IP Sbjct: 373 LDLLRDIERLTRAPIP 388 >UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0M4_9GAMM Length = 582 Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 154/393 (39%), Positives = 205/393 (52%), Gaps = 11/393 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS +F+ L + E L+ G+ TPIQA +PL L GRDV G AQTGTGKT Sbjct: 1 MSTPDTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAY 119 AF + D KV P+AL++ PTRELA Q+ G L++ + Sbjct: 61 AAFALPILANI-------DVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIF 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG +QLK L G I++ T GRL+D+ ++ I+L I VVLDEAD M +GFI D+ Sbjct: 114 GGADMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDV 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + P +R LFSAT+ RVR++A + ++N I V T I++ + Sbjct: 174 DTILAKTP--KERKVALFSATMPKRVRDIANKHLSNPAEISVAAAATTNENIEQCYWLAK 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ L+ L+ E + I+F T+ I L G + L GD+ QK RLR + Sbjct: 232 GASKLEALKRLLAFEDTEGVIVFTRTRESTTVIAEQLRQTGLKASPLNGDMDQKMRLRTV 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + G LD+LVATDVAARGL + +THV NYD+P D E YVHRIGRTGRAG G +I Sbjct: 292 SDLKSGALDVLVATDVAARGLDVERITHVINYDVPFDEEAYVHRIGRTGRAGRKGKAILF 351 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTD 392 L IE SIP K P L D Sbjct: 352 VVPRERRMLRNIERLTRQSIPEIKL-PSVLAID 383 >UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0P8_9RHIZ Length = 457 Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 150/418 (35%), Positives = 222/418 (53%), Gaps = 15/418 (3%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 +T F F L + AL + TPIQ A+P LAGRD+ G AQTGTGKT AF Sbjct: 1 MTSTTFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 H+L++ + +ALI++PTRELAVQI L+E T + + +GG Sbjct: 61 PLLHHLMTVGGKPTTRTT--KALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVR 118 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L GVDIL+ T GRL+D +Q I+L + ++LDEADRM D+GF++D+ + + Sbjct: 119 PQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGK 178 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P + R +M+FSAT+ + +L+ + + N + + V P T +I + +F K Sbjct: 179 CP--DDRQSMMFSATMPKPIEDLSKKILTNPQKVSVTPAVVTVEKIAQSVFSVPQRAKKH 236 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L + + R ++F TKH + L G + + G+ +Q R + L F G Sbjct: 237 WLIDFVSKNDTGRIVVFTRTKHGANRLTSDLDKAGIQALAIHGNKSQTARQKALGAFQDG 296 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 ++D+LVATD+ ARG+H+ ++HV N+DLP++ E YVHRIGRT RAG SG +I+L Sbjct: 297 EIDVLVATDIVARGIHVDDISHVVNFDLPEEPESYVHRIGRTARAGRSGQAIALVDPSER 356 Query: 366 LNLPAIETYIGHSIP--VSKYNPDALMTDLPKPLRLTRPRTGNGPR----RTGAPRNR 417 L I G + + Y + L +L R GPR R G PRNR Sbjct: 357 AKLKQIIKLTGIDLTPQATDYTVNVLAGELDADDGKRR-----GPRNQQPRNGRPRNR 409 >UniRef50_Q7UNV7 ATP-dependent RNA helicase n=3 Tax=Planctomycetaceae RepID=Q7UNV7_RHOBA Length = 452 Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 139/366 (37%), Positives = 211/366 (57%), Gaps = 8/366 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L P + A++ GF +PIQA +P L G+DV GQA+TGTGKT AF Sbjct: 46 FDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILEQ 105 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L S D P+A+++ PTRELA Q+ A+AE LA ++ + GG ++QL+ Sbjct: 106 LDSLEDCRD-----PQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQ 160 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 LE+G +++GT GR+ D+ ++ + + VVLDEADRM D+GF I + R+ P Sbjct: 161 LENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCP--R 218 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R +L SATL VR LA M+ I+ ++ I++ F + ++K+RLL++L Sbjct: 219 NRQTLLLSATLPPVVRRLAESYMHEPVVIDCCRDEMAVDTIEQRYFTIAQDDKVRLLESL 278 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAAD-GHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++ E P++AIIF TK + + L+ + G G + GD+ Q++R R+L + G+L Sbjct: 279 LKREKPEQAIIFCRTKRGTDRLHRKLSHEYGSACGAIHGDLQQRERDRVLQKLRDGNLKF 338 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDV RG+ I ++H+ N+D+P DC+DYVHR+GRTGR G G + + L Sbjct: 339 LVATDVVGRGIDISTISHIVNFDVPQDCDDYVHRVGRTGRMGRDGVAYTFVVPGEGDILT 398 Query: 370 AIETYI 375 +IE I Sbjct: 399 SIEQRI 404 >UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteobacteria RepID=Q0BSI7_GRABC Length = 763 Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 146/370 (39%), Positives = 203/370 (54%), Gaps = 6/370 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L V A+ + G+ + TPIQA A+P+ L GRDV G AQTGTGKT +F Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L A + PR+LI+ PTRELA+Q+ + + L L GG+ + Q V Sbjct: 285 LSDRRA----RARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDV 340 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+LI T GRLID + + L +++V+DEADRM D+GFI D+ + +P + Sbjct: 341 LSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLP--H 398 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R + FSAT++ +R LA + N + I V I L +K + L+ L Sbjct: 399 NRQTLFFSATMAPEIRRLADAFLQNPKEITVAKPASVATTITSGLALVGEMDKRKALRHL 458 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + +E A+IF N K + + L G G L GD+AQ R L++F G L +L Sbjct: 459 LRQEKVQNALIFCNRKRDVDILTKSLVKHGFAAGPLHGDLAQSLRFSTLEKFKAGSLQLL 518 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 V +DVAARG+ I ++HVFN+D+P EDYVHRIGRTGRAG G + +LA + + A Sbjct: 519 VCSDVAARGIDIGGLSHVFNFDVPIHAEDYVHRIGRTGRAGREGAAFTLASPDDKFAVDA 578 Query: 371 IETYIGHSIP 380 IE I IP Sbjct: 579 IEKLINAPIP 588 >UniRef50_A6FEC9 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Moritella sp. PE36 RepID=A6FEC9_9GAMM Length = 460 Score = 250 bits (639), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 149/431 (34%), Positives = 235/431 (54%), Gaps = 23/431 (5%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F DF + P+++ ++E GF T +Q A+PL L G D+ +QTG+GKT+A+ Sbjct: 2 RFQDFGIDPRLISSIEHLGFEQATEVQEAAIPLILGGCDIMATSQTGSGKTIAYGLPILQ 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 +L R V RA+I+APTRELA+Q+HA+ + L + ++ L G + + Q K Sbjct: 62 RMLKQRRFEHRAV---RAVILAPTRELAIQVHANMKHLGMSLDYQIQLIIGRESFQHQEK 118 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 +L ++LI T GRL+D+ ++ I+L ++ +VLDEADRM D+GF D+ + P Sbjct: 119 LLRKNPEVLIATPGRLLDHIREKSISLEHLEFLVLDEADRMLDMGFRDDVSAISNSAPNV 178 Query: 190 NQRLNMLFSATLSY-RVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLL 247 +R MLFSATL + V + + + E IE+ +I++ LF+ N K L Sbjct: 179 -KRQTMLFSATLEHVDVANICNQVLRAPERIEINRSNDQHEKIEQRLFFSDNLTHKEEQL 237 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ E + +IF TK E + L + + GD+ Q +R R L++F RG + Sbjct: 238 VHLVKSEDYRQLLIFTATKLDTERLAKLLMDNDIDATSIHGDMLQNQRKRTLEDFRRGRV 297 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVAARGL I ++HV N+DLP + ED++HR GRTGRAGA+G +ISL + + Sbjct: 298 GVLVATDVAARGLDIRTLSHVINFDLPINPEDFIHRTGRTGRAGATGIAISLVSPKDWTS 357 Query: 368 LPAIETYIGHSIPVSK----------YNPDALMTDLP-----KPLRLTRPRTGNGP--RR 410 I++Y+ +P + + P LP +P +L R N P ++ Sbjct: 358 FGKIQSYLKVKLPCTMLEGFEAKFKGFKPKPAKKRLPVSNKGRPAKLARKGDKNAPKQKQ 417 Query: 411 TGAPRNRRRSG 421 AP+ ++ G Sbjct: 418 NTAPKQDKKQG 428 >UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Firmicutes RepID=D2RJY3_ACIFE Length = 544 Score = 250 bits (638), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 140/378 (37%), Positives = 217/378 (57%), Gaps = 13/378 (3%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 SK +T F D L K++ AL++ GF +PIQ A+P+ L G D+ GQAQTGTGKT Sbjct: 14 SKPEIT--SFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMALEGEDLIGQAQTGTGKTA 71 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AF + + K +AL+M+PTREL +Q+ + + + +++ YGG Sbjct: 72 AFGIPIIQKI-------NEKDRHIQALVMSPTRELCIQVADEISKIGKTKRIRVLPVYGG 124 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 ++Q++ L+ G+ ++IGT GRL+D+ ++ I+L + +VLDEAD M D+GF+ D+ Sbjct: 125 QPIERQIRSLKRGIQVVIGTPGRLLDHIRRGTIDLEYVNFLVLDEADEMLDMGFVDDMEN 184 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + +PP +R MLFSAT+ + ++ + M + + + E T I + +Y Sbjct: 185 IIKNVPP--ERQTMLFSATMPRPILSISKKYMRAPKVVAIHKEVVTAPTIDQ--YYYETR 240 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 +K+ L +++ + IIF TK +E+ LA G+ L GD++Q +R R++ + Sbjct: 241 DKVDGLCRILDTTDDCKMIIFCRTKKGVDELVIALATRGYEAEGLHGDLSQNQRDRVMKK 300 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G +DILVATDVAARGL I +THV N+D+P D E YVHRIGRTGRAG +G +++ Sbjct: 301 FRSGQVDILVATDVAARGLDIDNITHVVNFDVPSDSESYVHRIGRTGRAGNTGVALTFIT 360 Query: 362 EEYALNLPAIETYIGHSI 379 L IE I I Sbjct: 361 PREFRQLKLIERSIKTKI 378 >UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=root RepID=C7PD17_CHIPD Length = 492 Score = 249 bits (637), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 157/421 (37%), Positives = 226/421 (53%), Gaps = 11/421 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 LT F L +++AL+ +G+ TPIQ A+P L RD+ G AQTGTGKT AF Sbjct: 24 LTILSFEQLGLIEPLLKALDNEGYTAPTPIQQQAIPHVLDTRDLLGCAQTGTGKTAAFAI 83 Query: 66 STFHYLLSHPAIADRK-VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 + RK + +ALI+ PTRELA+QI + LK + +GG Sbjct: 84 PLLQLMHQDQQAQQRKGLRNIKALILTPTRELAIQIQESFTAYGKFLDLKSLVIFGGVSQ 143 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q + L+ GVDILI T GRL+D QN+I L I+ VLDEADRM D+GF+ D++ + Sbjct: 144 HPQTEALKKGVDILIATPGRLLDLISQNYITLRDIKYFVLDEADRMLDMGFVHDVQRVIV 203 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQM-NNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 ++P QR ++ FSAT+ ++ LA + NN +EV P T I + +++ + +K Sbjct: 204 KLP--EQRQSLFFSATMPPEIQTLAKAILRNNPAKVEVTPVSSTAETITQSMYFVNKNDK 261 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 LL +++++ ++F TKH + + L + G+ +Q R R L+ F Sbjct: 262 RNLLLHILKDKAIKTLLVFTRTKHGADRVVKDLHKAEITAEAIHGNKSQNARQRALNNFK 321 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 +LVATD+AARG+ I +THV NY+LP+ E YVHRIGRTGRAGA G +IS E Sbjct: 322 SQQTRVLVATDIAARGIDIDELTHVVNYELPNVPETYVHRIGRTGRAGADGIAISFCEPE 381 Query: 364 YALNLPAIETYIGHSIPVSKYNP----DALMTDLPKPLRLTRPRTGNGPR--RTGAPRNR 417 L I I IPV +P D++ PKP +P+ + PR + G RNR Sbjct: 382 EKAFLKDILKLISREIPVETEHPFHNGDSMALPAPKPAPQQKPKQQH-PRDKKGGFSRNR 440 Query: 418 R 418 + Sbjct: 441 Q 441 >UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5V0_9RHOB Length = 453 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 139/358 (38%), Positives = 207/358 (57%), Gaps = 6/358 (1%) Query: 23 ALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLL-SHPAIADRK 81 AL+ KG+ TPIQ A+P L G+D+ G AQTGTGKT AF LL S A + Sbjct: 16 ALKSKGYSEPTPIQENAIPYILDGKDLLGLAQTGTGKTAAFAVPLLQRLLESRYRAAPKS 75 Query: 82 VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGT 141 V R+LI+ PTRELA QI + + A T + GG + Q L+ G+D+L+ T Sbjct: 76 V---RSLILTPTRELADQITKNIKAYAGRTKMYTSCVVGGVPFPPQFHALQRGLDVLVAT 132 Query: 142 TGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATL 201 GRL+D ++N ++ +++ VLDEAD+M DLGFI ++ + +P +R + FSAT+ Sbjct: 133 PGRLLDLHRKNGVSFDELEIFVLDEADQMLDLGFIAELEEIAYLLP--KKRQTLFFSATM 190 Query: 202 SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAII 261 +R+L+ + N + P T + +++ + + K LL+ L+E++ +RA++ Sbjct: 191 PREIRDLSERFLTNPVEVSTAPPATTVETVTQQIAHLEKDAKFPLLKELLEKDECERALV 250 Query: 262 FANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLH 321 F TK + L ADG + GD++Q +R + LD+F RG L LVATDVAARG+ Sbjct: 251 FTLTKKGSARLAARLNADGVPAEAIHGDMSQAERQKTLDKFKRGKLKTLVATDVAARGID 310 Query: 322 IPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSI 379 + ++HV N+D+P+ E+YVHRIGRT RAG SG +I+ E L AI+ IG I Sbjct: 311 VSDISHVINFDMPNATENYVHRIGRTARAGKSGTAITFCLPEDRGMLRAIQKLIGKKI 368 >UniRef50_Q4KGF7 ATP-dependent RNA helicase SrmB n=25 Tax=Gammaproteobacteria RepID=Q4KGF7_PSEF5 Length = 473 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 142/371 (38%), Positives = 220/371 (59%), Gaps = 8/371 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS FALH ++++A+ + F TP+QA A+PL L GRD+ AQTG+GKT AF+ + Sbjct: 29 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 88 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+ PA + + LI+ PTRELA Q + E ++ T +K GL GG+ + Q + Sbjct: 89 LIG-PAKIRVSI---KTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAM 144 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L DILIGT GR+++ +++L ++V+VLDEADRM D+GF +D++ L P N Sbjct: 145 LRKVPDILIGTPGRMLEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECP--N 202 Query: 191 QRLNMLFSATLSYR-VRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS-NEEKMRLLQ 248 ++ MLFSAT +RE+ + +NN E++++ + ++++ N+ K +++ Sbjct: 203 RQQTMLFSATTGGSGLREMVAKVLNNPEHLQLNSVSQLNETTRQQIITADHNQHKEQIVN 262 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ E +AI+F NT+ + I+G L A ++ +L G+ QK R +D +G + Sbjct: 263 WLLANETYQKAIVFTNTRAMADRIYGRLVAQDYKAFVLHGEKDQKDRKLAIDRLKQGGVK 322 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL + + V N+D+P ++YVHRIGRTGRAG G +ISL C + Sbjct: 323 ILVATDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLM 382 Query: 369 PAIETYIGHSI 379 +IE Y+ S Sbjct: 383 SSIERYLKQSF 393 >UniRef50_B9ZPI5 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=B9ZPI5_9GAMM Length = 627 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 145/349 (41%), Positives = 200/349 (57%), Gaps = 11/349 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F++ L + AL + GF TP+QA +P LAG DV G+AQTGTGKT AF Sbjct: 7 FAELGLSESLARALLQLGFTTPTPVQAACIPALLAGDDVLGEAQTGTGKTGAFGLP---- 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLK 129 L+ A R+V ALI+APTRELA Q+ E A + GL++ YGG Q++ Sbjct: 63 LIDSIDPAQRRVQ---ALILAPTRELAGQVATALEGFAASIDGLEILPVYGGQPMGVQIR 119 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G +++GT GR++D+ K+ + L A+++VVLDEAD M +GF+++I W+ + P Sbjct: 120 ALRDGAQVVVGTPGRVVDHIKRGTLTLDALRMVVLDEADEMLRMGFVEEIEWILEQTP-- 177 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R LFSAT+ +R +A M + I + + G I + K L Sbjct: 178 AERQTTLFSATMPAPIRRIAHRHMREPQEIRIGAGNEAGTDIDQSYCLVDQRHKTEALGR 237 Query: 250 LIE-EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +IE E D AI+FA TK EI L A G + L GD+ Q +R R++ + G LD Sbjct: 238 MIEVEAGLDAAIVFARTKAATAEIAEALNAQGVQSSPLNGDMEQGERERVVADLRDGRLD 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 ++VATDVAARG+ +P +THVFNYD P D E YVHRIGRTGRAG G +I Sbjct: 298 VIVATDVAARGIDVPRITHVFNYDAPGDAEVYVHRIGRTGRAGRKGRAI 346 >UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=Alphaproteobacteria RepID=B8ILJ8_METNO Length = 506 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 139/371 (37%), Positives = 205/371 (55%), Gaps = 2/371 (0%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F DF L +++AL + G+ TPIQA A+P + GRD+ G AQTGTGKT AF H Sbjct: 3 QFVDFGLAAPIMKALAETGYVTPTPIQAQAVPPAMTGRDLCGIAQTGTGKTAAFALPILH 62 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L S R L+++PTRELA QI + + +GG +Q + Sbjct: 63 RLASETPAKRAPRRGCRVLVLSPTRELASQIADSFRDYGKFLPFSTTVVFGGVTIGRQER 122 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L +G+D+L+ T GRL+D + ++L +++ +VLDEAD+M DLGFI ++ + +P A Sbjct: 123 ALANGIDVLVATPGRLLDLVDRRSLSLDSVEYLVLDEADQMLDLGFIHALKRIVTLLPKA 182 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q ++ FSAT+ + LA + + + + V P T R+++ + + S K LL T Sbjct: 183 RQ--SLFFSATMPKNIATLAAQYLRDPVQVAVTPVATTAERVEQRVIHVSTGAKQALLGT 240 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++ +E DR ++F TKH + + L G + G+ +Q +R R L F G + Sbjct: 241 ILRDESIDRVLVFTRTKHGADRVVRGLEKVGIGSAAIHGNKSQPQRERALAAFRAGTCRV 300 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATD+AARG+ + VTHV N+DLP+ E YVHRIGRT RAGA G +IS EE L Sbjct: 301 LVATDIAARGIDVEGVTHVVNFDLPNVPEAYVHRIGRTARAGADGLAISFCNEEERAYLR 360 Query: 370 AIETYIGHSIP 380 IE +P Sbjct: 361 DIERLTRQKVP 371 >UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=Cyanobacteria RepID=UPI0001C33831 Length = 477 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 142/376 (37%), Positives = 210/376 (55%), Gaps = 14/376 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L V L++ GF N T IQ A+PL L G DV GQ+QTGTGKT A+ Sbjct: 5 FENLGLSETRVNKLKELGFENPTEIQEKAIPLMLEGHDVLGQSQTGTGKTAAY------- 57 Query: 71 LLSHPAIADRKVNQP--RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 S P + + P + LI+ PTRELA Q+ + L + YGG D+Q+ Sbjct: 58 --SLPILEKVDIQDPSVQVLILTPTRELAQQVAEALKDFTVRRRLYILTVYGGQSIDRQI 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + LE GV I++GT GR+ID ++ + L +++ VLDEAD M +GFI D++ + ++ P Sbjct: 116 RSLERGVQIVVGTPGRVIDLIERKKLILDSLRWAVLDEADEMLSMGFIDDVKTILKKTPE 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFY-PSNEEKMRLL 247 + R FSAT+ +REL + + + I VE Q RI++ ++ P K + L Sbjct: 176 S--RSTACFSATMPREIRELVNQFLKSPVTISVERTQAAPTRIEQNIYMVPRGWSKRKAL 233 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 Q ++E E P+ AIIF TK ++ L GH V G+++Q +R R++ F G + Sbjct: 234 QPVLEIEDPESAIIFVRTKQTASDLTTRLQEIGHCVDEYHGNLSQSQRERLVHRFRDGRI 293 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ++VATD+AARGL + ++HV NYDLPD+ E Y+HRIGRTGRAG +G +IS+ Sbjct: 294 KLVVATDIAARGLDVEGLSHVINYDLPDNSETYIHRIGRTGRAGKTGKAISIVESADRRM 353 Query: 368 LPAIETYIGHSIPVSK 383 + IE + I + K Sbjct: 354 IRQIERKLRQKIDICK 369 >UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter RepID=Q17W71_HELAH Length = 494 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 137/352 (38%), Positives = 203/352 (57%), Gaps = 12/352 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L V++++ + GF + +PIQ A+P L GRDV QAQTGTGKT AF Sbjct: 24 FNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAF------- 76 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + P I + K N AL++ PTRELA+QI + L + T K YGG KQ + Sbjct: 77 --ALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTKTKTVCVYGGQSVKKQCE 134 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 ++ ++I T GRL+D+ K + I+ +VVVLDE+D M D+GF+ DI +F +P Sbjct: 135 FIKKNPQVMIATPGRLLDHLKNDRIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSE 194 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q L LFSAT+ +++LA + + N I + P T I + + + E+ + Sbjct: 195 AQIL--LFSATMPEPIKKLADKILENPIKIHIAPSNITNTDITQRFYVINEHERSEAIMH 252 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L++ + P+++I+F TK +E+ L + ++ L GD+ Q+ R + F + D D+ Sbjct: 253 LLDTQAPEKSIVFTRTKKEADELHQFLISKNYKSTALHGDMDQRDRRASIMAFKKNDADV 312 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 LVATDVA+RGL I V+HVFNY LP + E Y+HRIGRTGRAG G +I+L Sbjct: 313 LVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVT 364 >UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Tax=cellular organisms RepID=CSHA_BACCR Length = 533 Score = 248 bits (633), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 133/362 (36%), Positives = 212/362 (58%), Gaps = 9/362 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L +++++E GF TPIQA +P L G+D+ GQAQTGTGKT AF Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + +H + +++APTRELA+Q+ + + + +++ YGG ++Q++ Sbjct: 64 VDTHK-------ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRA 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ I++GT GR++D+ + + L ++ VVLDEAD M ++GFI+DI + +P + Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q L LFSAT+ +R +A M ++I+V+ ++ T I++ ++K +L L Sbjct: 177 QTL--LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ + P+ AI+F TK R +E+ L G+ + GD+ Q KR+ +L +F G +++L Sbjct: 235 LDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL I VTHV+N+D+P D E YVHRIGRTGRAG G ++ + L Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKN 354 Query: 371 IE 372 IE Sbjct: 355 IE 356 >UniRef50_Q6A841 Putative ATP-dependent RNA helicase n=2 Tax=Propionibacterium acnes RepID=Q6A841_PROAC Length = 561 Score = 248 bits (633), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 135/354 (38%), Positives = 212/354 (59%), Gaps = 7/354 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF-LTSTFH 69 F+D + + +ALE G + PIQA+++P+ + G D+ GQA+TGTGKT+AF +T Sbjct: 55 FADLGVREDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLR 114 Query: 70 YLLSHPAIADRKVNQ--PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L + + P+AL+M PTRELA+Q+ D A G ++ YGG GY+ Q Sbjct: 115 ITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGARVLTVYGGVGYESQ 174 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L++GVD+++GT GRL+D +++ ++L +++VVLDEAD M DLGF+ D+ L R P Sbjct: 175 IDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTP 234 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVE--PEQKTGHRIKEELFYPSNEEKMR 245 + Q MLFSAT+ + LA Q++ ++ E Q T ++ ++ +K+ Sbjct: 235 ASRQ--TMLFSATMPAPIMALARSQLHRPVHVRAEGADTQATVPDTQQFVYQAHPLDKIE 292 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 ++ +++ ++ IIF TK C+ + L G + + GD+ Q R + L +F G Sbjct: 293 IIGRILQANDVEKVIIFCRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALKKFRHG 352 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 D ILVATDVAARG+ + V+HV N++ P+D + YVHRIGRTGRAGA G +++L Sbjct: 353 DATILVATDVAARGIDVTGVSHVINHECPEDEKTYVHRIGRTGRAGAKGVAVTL 406 >UniRef50_D2QS74 DEAD/DEAH box helicase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QS74_9SPHI Length = 475 Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 143/377 (37%), Positives = 214/377 (56%), Gaps = 18/377 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F L+ +++ A+ + G+ TPIQ +PL+L DV G AQTGTGKT A+L Sbjct: 6 FEQFELNRQLLNAVAELGYTVPTPIQQKTIPLSLGNHDVLGIAQTGTGKTAAYLL----- 60 Query: 71 LLSHPAIADRKVNQ---PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 P + K Q PRALI+APTREL +QI+ L + T L+ YGG G Q Sbjct: 61 ----PILMKVKYAQGKNPRALILAPTRELVMQINQAVSELGKYTDLRHLALYGGLGPKTQ 116 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L +GVDI++ T GR +D + I I+ +VLDEAD+M D+GF+ IR + +P Sbjct: 117 IETLRNGVDIIVATPGRFMDLYRSGEIVTKEIRTMVLDEADKMMDMGFMPQIRSILEIIP 176 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF-YPSNEEKMRL 246 +R N+LFSAT RV L+ E + +EV P+ T + + ++ P+ K+ + Sbjct: 177 --TKRQNLLFSATFGGRVERLSSEFLEAPIKVEVTPQASTADMVSQVIYEAPNFRTKINM 234 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLA---ADGHRVGLLTGDVAQKKRLRILDEFT 303 L L+ +E R IIFA TK + I+ L+ + ++ ++ + Q R+ +D F Sbjct: 235 LDYLMRQEDFQRVIIFARTKGTADNIYKFLSRKVIEPEKIRVIHANKGQNTRINAMDAFK 294 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G++ +LV+TDVAARG+ + V+HV N+DLP EDYVHRIGRTGRA +G +I+ + Sbjct: 295 EGNIQVLVSTDVAARGIDVAEVSHVINFDLPLIYEDYVHRIGRTGRANRTGEAITFLTKA 354 Query: 364 YALNLPAIETYIGHSIP 380 ++ IE I +IP Sbjct: 355 EEYHVQKIERIIKATIP 371 >UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW85_METML Length = 576 Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 142/373 (38%), Positives = 216/373 (57%), Gaps = 6/373 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L+P ++ A+E+ G+ TPIQA A+P+ + G D+ AQTGTGKT F+ + Sbjct: 3 FESLNLNPAILRAIEETGYTTPTPIQAQAIPVVMEGHDLMASAQTGTGKTAGFMLPALN- 61 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 LL+ P + + PR L++ PTRELA Q++ A + + GG Y Q K+ Sbjct: 62 LLATPH--ESRSRGPRILVLTPTRELAAQVNEAARKYGKFLRARTVSIVGGMPYPLQNKL 119 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L +DIL+ T GRL+D+ ++ I+L +Q+++LDEADRM D+GF+ D+ + ++ + Sbjct: 120 LSQPLDILVATPGRLLDHMERGRIDLSRLQMLILDEADRMLDMGFLPDVERICEQL--SA 177 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEEL-FYPSNEEKMRLLQT 249 +R +LFSATL + +A + + N + ++V +++ I++ L F K +LL+ Sbjct: 178 ERQTLLFSATLDGDIARIAQQILKNPKTVQVAAQKEKHANIEQRLHFVDDMTHKNKLLEH 237 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ ++ IIF +TK + + L A GH+ L GD+ Q R R L + GD+ + Sbjct: 238 LLIAPEVNQTIIFTSTKRHADVLAEDLYAAGHKTAALHGDMTQGARNRTLTKLRHGDVKV 297 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARG+ + +THV NYDLP EDYVHRIGRTGRA +G +IS A L Sbjct: 298 LVATDVAARGIDVHGITHVINYDLPKFAEDYVHRIGRTGRANNTGIAISFASNMDRHLLR 357 Query: 370 AIETYIGHSIPVS 382 IE Y G+ + S Sbjct: 358 KIEQYTGNRLEAS 370 >UniRef50_D1BXK2 DEAD/DEAH box helicase domain protein n=6 Tax=Actinomycetales RepID=D1BXK2_XYLCX Length = 605 Score = 247 bits (631), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 150/400 (37%), Positives = 225/400 (56%), Gaps = 18/400 (4%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F+DF + ++V+AL G + PIQA+ LP+ L D+ GQA+TGTGKT+ F + Sbjct: 69 SFADFGVRQEIVDALTDVGITHPFPIQAMTLPVALQAHDIIGQAKTGTGKTLGFGIPLLN 128 Query: 70 YLLS--HPAIADRKV--NQPRALIMAPTRELAVQIHAD-AEPLAEATGLKLGLAYGGDGY 124 +++ P D V +P+A+++APTRELAVQ+ D A A L++ YGG Y Sbjct: 129 RVVAPGEPGW-DELVAPGKPQAVVVAPTRELAVQVAGDLATASAHRPSLRVIQIYGGRAY 187 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 + Q++ L+ G ++++GT GR++D Q H+NL + +VLDEAD M DLGF+ D+ + Sbjct: 188 EPQIEQLQRGAEVVVGTPGRMVDLLNQGHLNLLRAETIVLDEADEMLDLGFLPDVEKILS 247 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEV---EPEQKTGHRIKEELFYPSNE 241 R+P +R MLFSAT+ V +A M+ +I + E T IK+ ++ Sbjct: 248 RLP--AKRHTMLFSATMPGAVVSMARRYMSQPTHIRAADPDDEGVTVKNIKQVVYRAHAL 305 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 +K+ +L L++ E R+I+FA TK ++ L G G + GD+ Q R + L Sbjct: 306 DKIEVLARLLQAEGRGRSIVFARTKRTAAKVSDELRDRGFAAGAIHGDLGQGAREQALRA 365 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA- 360 G +D+LVATDVAARG+ + VTHV NY P+D Y+HR+GRTGRAG G +++ Sbjct: 366 LRHGKIDVLVATDVAARGIDVDDVTHVVNYQCPEDERTYLHRVGRTGRAGNKGTAVTFVD 425 Query: 361 ---CEEYALNLPAIETYIGHSIPVSKYNPDA-LMTDLPKP 396 ++L A+ET GH PV Y+ L DL P Sbjct: 426 WDDMPRWSLIDKALET--GHPEPVETYSTSPHLFADLNIP 463 >UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=C4LJP9_CORK4 Length = 823 Score = 247 bits (631), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 141/358 (39%), Positives = 204/358 (56%), Gaps = 10/358 (2%) Query: 23 ALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKV 82 A++K GF +PIQA +P+ GRDV G AQTGTGKT AF L DR Sbjct: 168 AVKKVGFETPSPIQAATIPILAQGRDVVGLAQTGTGKTAAFALPILSRL-------DRSQ 220 Query: 83 NQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQLKVLESGVDILIGT 141 +P+AL+++PTRELA+Q+ + A+ G+ + YGG Y QL L G I++GT Sbjct: 221 KKPQALVLSPTRELALQVADAFQEFADHLGGVHVLPIYGGQSYGIQLSGLRRGAHIVVGT 280 Query: 142 TGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATL 201 GR+ID+ ++ ++L ++ +VLDEAD M ++GF +D+ + P Q LFSAT+ Sbjct: 281 PGRVIDHLERGSLDLSELKYLVLDEADEMLNMGFQEDVERILADTPEHKQ--TALFSATM 338 Query: 202 SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAII 261 +R L+ + + + + ++ +Q+T I ++ ++ K+ L ++E D I+ Sbjct: 339 PASIRRLSKQYLEDPREVTIKSQQRTADNIHQQYLLVNHHYKLDALTRILEVTEFDAMIM 398 Query: 262 FANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLH 321 FA TK EE+ L A G + GD+AQ +R R +D+ G LDILVATDVAARGL Sbjct: 399 FARTKQNTEELAEKLRARGFSAAAINGDMAQNQRERTVDQLRDGRLDILVATDVAARGLD 458 Query: 322 IPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSI 379 + ++HV NYD+P D E YVHRIGRTGRAG SG +I L +IE SI Sbjct: 459 VERISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRLLRSIERATKSSI 516 >UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE59_GEMAT Length = 498 Score = 247 bits (631), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 136/370 (36%), Positives = 202/370 (54%), Gaps = 7/370 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS LHP + + L++ GF TPIQ A+P L GRDV A TG+GKT AFL H Sbjct: 5 FSSLQLHPSLQQGLKELGFARPTPIQGEAIPPALEGRDVLACAMTGSGKTYAFLLPILHQ 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+S P RAL++ PTRELA QI + + T L +GG G Q Sbjct: 65 LMSKPR------GNTRALVLTPTRELAAQILESLQDVTTHTPLTGAAVFGGVGMGPQEHA 118 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 SGVD+++ T GRL+D+ +Q + L ++ +VLDEADRM D+GF+ +I+ + R +P Sbjct: 119 FRSGVDVIVATPGRLLDHFRQPYAKLDQLEYLVLDEADRMLDMGFLPEIKKILRHLP-NR 177 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R + FSAT+ + L E +N + ++ + I + ++ S E K LL L Sbjct: 178 KRQTLFFSATMPPPIAALTQEMLNKPVTLNLQRQAAPAKGITQAVYPVSQELKSALLVAL 237 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ +A++F TKHR + L G + + G+ +Q +R + L F G +L Sbjct: 238 LKRGDMPQALVFTRTKHRANRLASQLVTAGIKAERIHGNRSQSQRTQALAGFKDGSYQVL 297 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ + A+ HV N+D+P EDY+HR+GRT RA A+G + + E L Sbjct: 298 VATDIAARGIDVEALGHVVNFDVPVAAEDYIHRVGRTARAEATGEAFTFVSPEEEGELKL 357 Query: 371 IETYIGHSIP 380 IE I ++P Sbjct: 358 IERAIKRALP 367 >UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hydrogenothermaceae RepID=B2V9H9_SULSY Length = 405 Score = 247 bits (630), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 147/411 (35%), Positives = 225/411 (54%), Gaps = 18/411 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L + +++L++ G+ T IQ A+P + G+D+ QAQTGTGKT AF Sbjct: 8 FKDLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKTAAFGVPIVEK 67 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + +P K + +ALI+ PTRELA+Q+ + + L + + YGG Q+ Sbjct: 68 V--NP-----KQKKVQALILVPTRELAIQVAKEIKELGKNKKVYTLAVYGGKSISHQINF 120 Query: 131 LESGVDILI-GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ G D+++ GT GR+ D ++ +NL +++ VLDEADRM ++GFI DI + +P Sbjct: 121 LKKGSDVVVVGTPGRVRDLLERGVLNLDNVKMFVLDEADRMLEMGFIDDIEEIMSYLPED 180 Query: 190 NQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 Q N+LFSAT+ + +LA E +N N E I V+P++ T +IK+ ++ + +K + L Sbjct: 181 RQ--NLLFSATMPKEILDLAEEFLNENYETIRVKPDEVTVEKIKQIIYRVNPRDKFKKLT 238 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ + ++ IIF TK +E+ L +G + GD +QKKR +L F G L Sbjct: 239 EVLSQNEAEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLK 298 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL I V V NY LP D E Y+HRIGRTGRAG G +IS+ Sbjct: 299 ILVATDVAARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMT------- 351 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 P+ + + + +K N + + K L + + R+ + RRR Sbjct: 352 PSEDKQLQNIQKKTKANIEVINEAQEKKLSSAQKDKSSQKERSSRNQTRRR 402 >UniRef50_A4C3X3 RNA helicase DeaD n=3 Tax=Alteromonadales RepID=A4C3X3_9GAMM Length = 624 Score = 246 bits (629), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 139/382 (36%), Positives = 215/382 (56%), Gaps = 16/382 (4%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T T+ +F L V++A+ + G+ TPIQ+ A+P LAG+DV G+AQTGTGKT AF Sbjct: 2 TDTTQVRFDQLNLLAPVLQAINEMGYITPTPIQSQAIPSLLAGKDVLGEAQTGTGKTAAF 61 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT----GLKLGLAY 119 L D + QP+ L++ PTRELA+Q+ AE L + GL + Y Sbjct: 62 GLPLLSRL-------DADLKQPQMLVVCPTRELAIQV---AEALTDFAKHIRGLFVATVY 111 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y QL+ L G I++GT GR++D+ K+ + L ++ VLDEAD M ++GF++DI Sbjct: 112 GGQSYTPQLRDLARGPQIVVGTPGRMMDHIKKGRLKLDNLKACVLDEADEMLNMGFLEDI 171 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 W+ ++P +Q FSAT+ ++++ + + + ++++ ++ +I ++ + Sbjct: 172 EWILNQIP--DQTQMAFFSATMPAPIKKITNQFLTDPIHVKIAVQKSDKPKITQKSWTVG 229 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K L+ + E D I+F T++ + HL + G + L GD+ Q+ R RI+ Sbjct: 230 RIGKTVGLERIAEVVDYDAMIVFVRTRNDTLVLAEHLVSKGFKASALNGDMQQQDRERIV 289 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 ++ G ++IL+ATDV ARGL +P +THV NYDLP D E YVHRIGRTGRAG G +I Sbjct: 290 EQLKNGRINILIATDVVARGLDVPRITHVINYDLPHDSESYVHRIGRTGRAGREGEAILF 349 Query: 360 ACEEYALNLPAIETYIGHSIPV 381 A +L +E I V Sbjct: 350 ASHREVRSLSRLERITEGKIEV 371 >UniRef50_B7IA63 DEAD/DEAH box helicase n=17 Tax=Acinetobacter RepID=B7IA63_ACIB5 Length = 615 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 151/390 (38%), Positives = 217/390 (55%), Gaps = 16/390 (4%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MSKT F++F+LH + +ALE GF N TP+Q ++P L G+D+ +QTG+GKT Sbjct: 1 MSKT------FAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKT 54 Query: 61 MAFLTSTFHYLLSHPAIADRK-----VNQPRALIMAPTRELAVQIHADAEPLAE-ATGLK 114 AFL T H L K V QP L++ PTRELA Q+ DA G++ Sbjct: 55 AAFLLPTLHNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVR 114 Query: 115 LGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLG 174 + GG + KQ++ L+ G +++ T GRL+D + + L + +++DEADRM DLG Sbjct: 115 IAAIMGGMPFGKQIQQLK-GAQVVVATPGRLLDLVNRRQLKLDKVDALIVDEADRMLDLG 173 Query: 175 FIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEE 234 F +D+ + AN+ ++FSAT + R+ LA MN E I +E T I + Sbjct: 174 FSEDLEAISDLA--ANRGQTLMFSATFADRIIRLAERMMNEPERIAIETGHSTNTDITQT 231 Query: 235 LFYPSN-EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQK 293 L + E K +LL + +E D+A++FA+T+ + + LA GH V L G + Q Sbjct: 232 LHWTDGFEHKKKLLTHWLADETLDQAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQT 291 Query: 294 KRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGAS 353 R R L G ILVATDVAARGL +P ++HV N+ LP EDYVHRIGRTGRAG + Sbjct: 292 VRNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRT 351 Query: 354 GHSISLACEEYALNLPAIETYIGHSIPVSK 383 G +I+LA + A+E Y+ + VS+ Sbjct: 352 GQAITLATYRERGKIRALEDYLEARLNVSE 381 >UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Bermanella marisrubri RepID=Q1MY97_9GAMM Length = 614 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 133/348 (38%), Positives = 206/348 (59%), Gaps = 10/348 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ L ++ A+E++G+ +PIQ ++P L G+DV G AQTGTGKT AF T Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAF---TLPL 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQLK 129 L A +V +P+ L++APTRELA Q+ E ++ + +K+ YGG + Q + Sbjct: 65 L----ARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFR 120 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ G ++GT GR++D+ ++ + L I+ VVLDEAD M +GFI D+ W+ ++P Sbjct: 121 ALKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVP-- 178 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R LFSAT+ +++ +A + + I ++ + T I+++ + +K + L Sbjct: 179 EKRQIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKYWLVKGVDKNQALLR 238 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 + E D ++F TK EE+ ++ + G R L GDVAQ +R R +D +G +D+ Sbjct: 239 ICETSEFDAMMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQRERAVDRLKKGQVDM 298 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 LVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 299 LVATDVAARGLDVERISHVVNYDIPYDAESYVHRIGRTGRAGRSGEAI 346 >UniRef50_Q11WD3 Possible ATP-dependent RNA helicase n=8 Tax=Sphingobacteriales RepID=Q11WD3_CYTH3 Length = 463 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 145/379 (38%), Positives = 218/379 (57%), Gaps = 17/379 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF---LTST 67 F + L+ +++ A+E+ G+ T IQ+ A+P LAG D+ G AQTGTGKT A+ + Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 Y H PRA+I PTREL +QI + LA+ T L++ YGG G Q Sbjct: 67 IKYAQGH---------NPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQ 117 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L+ GVDI++ T GR +D + I L ++ +VLDEAD+M D+GF+ +R + +P Sbjct: 118 KEHLQKGVDIIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMDMGFMPQLRKMLEVIP 177 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF-YPSNEEKMRL 246 +R N+LFSAT+S RV L E + IEV P+ I ++L+ P+ + K+ L Sbjct: 178 --RKRQNLLFSATMSERVERLTEEFLEYPMKIEVTPQATPATLISQKLYKVPNFKTKIHL 235 Query: 247 LQTLI-EEEWPDRAIIFANTKHRCEEIWGHLA-ADGHRVGLLTGDVAQKKRLRILDEFTR 304 L+ LI ++E RAIIF TK ++I+ + + ++ + Q R+ +D+F Sbjct: 236 LEYLIRKDESVTRAIIFVRTKKSADDIYKFIIRKTTNTCRIIHANKDQNSRINAMDDFKD 295 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G + ILVATDVAARG+ + V+HV N+D+P +DY+HRIGRTGRA +G +I+ A E Sbjct: 296 GTIKILVATDVAARGIDVHEVSHVINFDVPIIYDDYIHRIGRTGRANHTGVAITFATEAE 355 Query: 365 ALNLPAIETYIGHSIPVSK 383 ++ IE I IPV + Sbjct: 356 MYHIEKIEKIIRMQIPVEE 374 >UniRef50_C4V5M7 DEAD/DEAH box helicase domain protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V5M7_9FIRM Length = 426 Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 144/350 (41%), Positives = 198/350 (56%), Gaps = 11/350 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + + L+K+G TP+Q A+P AGRDV QAQTGTGKT+A+L Sbjct: 4 FDQLGISETLTALLQKQGITQPTPVQEQAIPPMRAGRDVIAQAQTGTGKTLAYLLPLLAR 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + A A +AL++APTRELA+QI A LAE G+ + YGG ++Q + Sbjct: 64 IKPQGAAA-------QALVIAPTRELAIQIEHVAASLAEPLGIGTTVIYGGADIERQKEK 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L ++IGT GRL+D+ ++ + LG + VVLDEAD M +GFI+D+ L + A Sbjct: 117 LRRSPQLVIGTPGRLLDHVRRGTLALGRVNKVVLDEADEMLKMGFIEDVETL---LGAAA 173 Query: 191 QRLNM-LFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q + LFSAT+ R+ L M N +I + E T I++ + S +K+ L Sbjct: 174 QDYQLALFSATMPERIVRLTKRFMTNPAHIRLAGETVTLAAIEQVVIPVSAGDKLDRLCA 233 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 I EE P A++F TK R + LA G+ V L+GD+ Q +R +L +F L I Sbjct: 234 SINEEAPYLAMVFCATKERTRALMMELAQRGYLVDALSGDLTQTQRSFVLRQFRSAKLQI 293 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 L ATD+AARGL I VTHV+NYDLP DY+HRIGRTGRAG G +I+L Sbjct: 294 LCATDIAARGLDIEGVTHVYNYDLPPTVTDYIHRIGRTGRAGTQGKAITL 343 >UniRef50_B2S5R2 ATP-dependent RNA helicase, DEAD/DEAH box family n=54 Tax=cellular organisms RepID=B2S5R2_BRUA1 Length = 531 Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 141/360 (39%), Positives = 203/360 (56%), Gaps = 9/360 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ + +++ +E G PIQ A+P L G+D+ G AQTG+GKT AF Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148 Query: 71 LLSHPAIAD-RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 ++ + D R+ RALI+APTRELAVQI ++++ + L GG Q+K Sbjct: 149 II---GLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIK 205 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 + G+D+LI T GRL D + ++L + +VLDEADRM D+GFI D++ + + Sbjct: 206 RIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKAT--H 263 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R LFSAT+ + LA + + +EV P+ T I + + +EK RLL Sbjct: 264 AERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGTTASEITQVVHPVPTKEKRRLLSA 323 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++ + I+F TKH + + HL D + V + G+ +Q R R L+ F G L I Sbjct: 324 MLTDADMRSVIVFTRTKHGADAVVRHLERDRYDVAAIHGNKSQNARQRALNGFRDGTLRI 383 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL---ACEEYAL 366 LVATD+AARG+ +P ++HV NYDLPD+ E YVHRIGRTGR GASG SI+L A EE L Sbjct: 384 LVATDIAARGIDVPGISHVVNYDLPDEPETYVHRIGRTGRNGASGASITLYDPATEESKL 443 >UniRef50_Q1QYG3 DEAD/DEAH box helicase-like protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYG3_CHRSD Length = 568 Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 140/361 (38%), Positives = 198/361 (54%), Gaps = 10/361 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ T + F++ +L ++ LE G+ + IQA +P L GRDV GQAQTGTGKT Sbjct: 1 MTTTPVASPTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAY 119 AF L D + +P+ L++APTRELA Q+ A GL++ Sbjct: 61 AAFALPLLSRL-------DLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLC 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y +QL L G +++GT GR+ID+ + + L + +VLDEAD M +GFI D+ Sbjct: 114 GGQEYREQLSGLRRGAQVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDV 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + P QR + FSATL + + + + I +E + KT I++ L Sbjct: 174 KRVVSDTPKDAQR--VFFSATLPDEISRIVNHYLVDPLRIAIETKTKTAEGIEQRLVRIE 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ L L+E E D AI+F T+ C + L G L+GD+ Q R R + Sbjct: 232 GGAKLEALSRLLEVEPVDAAIVFVRTRAACTTLVEQLLLRGVNAAALSGDLDQSLRERTV 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + RG +D+L+ATDVAARGL +P +THVFNYDLP D E Y HRIGRTGRAG +G +I+ Sbjct: 292 ERLKRGKVDVLIATDVAARGLDVPRITHVFNYDLPQDAEAYTHRIGRTGRAGRTGVAITF 351 Query: 360 A 360 A Sbjct: 352 A 352 >UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGQ2_KOSOT Length = 524 Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 139/365 (38%), Positives = 208/365 (56%), Gaps = 10/365 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS+ L K++ ++EK GF TPIQ+ A+P+ L GRD+ GQA TGTGKT AF Sbjct: 5 FSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIPLLEM 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGDGYDKQLK 129 L D + +ALI+ PTRELAVQ+ + LA +++ YGG ++Q+ Sbjct: 65 L-------DYSSKKVQALILCPTRELAVQVAREIAALASNRKEIEVLAIYGGQSIERQIN 117 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ G+ +++GT GR++D+ ++ + L + VVLDEAD M ++GF++DIR++ + Sbjct: 118 TLKKGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLNMGFLEDIRYILSHV--G 175 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +FSAT+ + LA E E I+V + T +++ K L Sbjct: 176 KERQITMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDALSK 235 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LIE P +++F NTK + +E+ L A G+ V L GD++Q R R+++ F + + Sbjct: 236 LIEYYNPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKSIKV 295 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARG+ + + VFNYD+P D E YVHRIGRTGRAG +G + S A L Sbjct: 296 LVATDVAARGIDVDDIEAVFNYDIPQDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLHRLR 355 Query: 370 AIETY 374 I+ Y Sbjct: 356 EIQRY 360 >UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C311D7 Length = 481 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 143/364 (39%), Positives = 209/364 (57%), Gaps = 9/364 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L V+EAL G+ N +PIQ A+P LAG D+ GQAQTG+GKT AF Y Sbjct: 4 FADLGLSAPVLEALRDVGYENPSPIQEQAIPPLLAGNDMIGQAQTGSGKTAAFGLPLMEY 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + P+ DR V +AL++ PTREL +Q+ G+ + +GG Q Sbjct: 64 V--DPS--DRDV---QALVLTPTRELCIQVTQALRSYGARKGIDVVAVFGGAPIRSQQAQ 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L +G I++GT GR+ D ++ + L + VVLDEAD M DLGF++D+ + P + Sbjct: 117 LRAGGQIVVGTVGRVKDLISRHSLMLHGTRFVVLDEADEMLDLGFLEDVEKILALTPGSR 176 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q LFSAT+ +R+L+ + N +++V T +++ S +K +L T+ Sbjct: 177 Q--TALFSATMPPEIRKLSERYLYNPVHVKVRAATLTVDTVEQFSLEMSQRDKPDMLGTV 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 +E E PD+AI+F TK RC++++ L G V L GD++Q +R ++ F G L IL Sbjct: 235 LESEKPDQAIVFVRTKIRCDQLYRTLRDRGMNVKALHGDMSQGQRDGVMLSFKSGRLPIL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL I +VTHV N+D+P + YVHRIGRTGR G SG +I+ + ++ A Sbjct: 295 VATDVAARGLDISSVTHVVNFDVPTSPDVYVHRIGRTGRVGRSGRAITFYDSKQKRDIEA 354 Query: 371 IETY 374 IE + Sbjct: 355 IERH 358 >UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacteria RepID=Q0K893_RALEH Length = 646 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 155/413 (37%), Positives = 217/413 (52%), Gaps = 25/413 (6%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 E F+ L ++ AL + ++ TP+QA A+P LAGRD+ +QTG+GKT AF+ Sbjct: 57 ESGFATLGLDAAILRALSELNYNTPTPVQAQAIPAFLAGRDLLVSSQTGSGKTAAFMLPA 116 Query: 68 FHYLLSHPAI------ADRKVN--------QPRALIMAPTRELAVQI-HADAEPLAEATG 112 + PA A R QP L++ PTRELA+Q+ A A+ Sbjct: 117 IQRISEMPAPQRATEPAKRMKGKRPRPSPAQPALLVLTPTRELALQVTEAAAKYGRNLRR 176 Query: 113 LKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYD 172 + GG Y KQL L DIL+ T GRL+D+ I+L A+Q++V DEADRM D Sbjct: 177 IVCASILGGMPYPKQLAALAKMPDILVATPGRLLDHIDAGRIDLSALQMLVFDEADRMLD 236 Query: 173 LGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIK 232 +GF DI + P Q L +FSATL R+ +LA Q+ + + IE+ + I+ Sbjct: 237 MGFADDIDAIVNATPATRQTL--MFSATLDARIAQLASRQLRDPQRIEIAAARADQSHIE 294 Query: 233 EELFYPSN-EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVA 291 + L + + K RLL L+ + +AI+F TK + + L+ G G L GD+ Sbjct: 295 QRLHFTDDMSHKERLLDHLLRDATLKQAIVFTATKRDADSLAERLSDTGFSAGALHGDMT 354 Query: 292 QKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAG 351 Q R R L RG+L +LVATDVAARG+ +P +THV N+DLP EDYVHRIGRTGRAG Sbjct: 355 QGARNRTLTALRRGNLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAG 414 Query: 352 ASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 SG +I+L IE + I DA + + +P R +PR+ Sbjct: 415 RSGTAINLVNHNDMFQWKRIERFTNQRI-------DASVIEGLEPRRSPKPRS 460 >UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Tetrahymena thermophila RepID=Q24I45_TETTH Length = 713 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 136/334 (40%), Positives = 204/334 (61%), Gaps = 7/334 (2%) Query: 29 FHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRAL 88 F +PIQ+LA P+ L+G D+ G A+TG+GKT++FL + ++ + P + +K + P L Sbjct: 121 FEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSIVHINAQPTV--KKGDGPIVL 178 Query: 89 IMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDY 148 ++APTRELA+QI ++E +++ LK YGG Q +L+ GVD++I T GRLID+ Sbjct: 179 VLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDF 238 Query: 149 AKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVREL 208 + L + +VLDEADRM D+GF IR + ++ P Q L +FSAT V+ L Sbjct: 239 LESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTL--MFSATWPKNVQNL 296 Query: 209 AFEQMNNAE-YIEV-EPEQKTGHRIKEELFYPSNEEKM-RLLQTLIEEEWPDRAIIFANT 265 A + N Y+++ + E RIK+ ++ +K+ +L++ L D+ +IFA T Sbjct: 297 AQDYCKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLIKQLDCLTQKDKVLIFAQT 356 Query: 266 KHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAV 325 K CE + L +G + + GD AQK R ++++F G+ IL+ATDVA+RGL + V Sbjct: 357 KKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGECRILIATDVASRGLDVKDV 416 Query: 326 THVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 +HVFNYD P EDYVHRIGRTGRAGA G ++S Sbjct: 417 SHVFNYDFPKVMEDYVHRIGRTGRAGAYGCAVSF 450 >UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein n=7 Tax=cellular organisms RepID=C5EJJ1_9FIRM Length = 572 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 135/371 (36%), Positives = 216/371 (58%), Gaps = 10/371 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF + L +++ A+ + GF +PIQA A+P+ + GRD+ GQAQTGTGKT AF Sbjct: 5 KFDELQLDERIIRAITEMGFEEASPIQAQAIPVAMEGRDMIGQAQTGTGKTAAFGIPLLQ 64 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQL 128 + D KV + +A+I+ PTRELA+Q+ + LA+ G K+ YGG KQ+ Sbjct: 65 KV-------DPKVKKLQAIILLPTRELAIQVAEEMRRLAKFMHGTKVLPIYGGQDIVKQI 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ G I++GT GR++D+ ++ + + + VVLDEAD M ++GF++D+ + ++P Sbjct: 118 RSLKDGTQIVVGTPGRVMDHMRRKTVKMDHVHTVVLDEADEMLNMGFLEDMETILSQLP- 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R ++FSAT+ + ++A + ++ + V ++ T ++ + + + K+ ++ Sbjct: 177 -EERQTLMFSATMPQAIADIARKFQDDPVTVRVIKKELTVPKVTQYYYEVKPKNKVEVMC 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L++ P +I+F NTK + +E+ L G+ L GD+ Q +R R++ F G D Sbjct: 236 RLLDMYAPKLSIVFCNTKRQVDELVQALQGRGYFAEGLHGDLKQVQRDRVMGSFRNGRTD 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARG+ + V VFNYD+P D E YVHRIGRTGRAG G + SL + L Sbjct: 296 ILVATDVAARGIDVGDVEAVFNYDVPQDDEYYVHRIGRTGRAGREGKAFSLVVGKEVYKL 355 Query: 369 PAIETYIGHSI 379 I+ Y I Sbjct: 356 RDIQRYCKTKI 366 >UniRef50_A3ZWP8 ATP-dependent RNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWP8_9PLAN Length = 428 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/365 (38%), Positives = 196/365 (53%), Gaps = 7/365 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 ++D AL ++ ALE + +PIQA +PL L GRDV GQA+TGTGKT AF Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L P P+ALI+ PTRELAVQ+ + L + + YGG Q++ Sbjct: 66 LEHGP-----NSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEK 120 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ I++GT GR+ID + + L ++ VVLDEADRM D+GF DI + RR P Sbjct: 121 LKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCP--E 178 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +L SAT+ + +LA M N E ++ P + I++ F + +K +L L Sbjct: 179 ERQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISAETIEQRYFTVDHSKKFDMLVEL 238 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ E P +AI+F TK E I L+ V + GD+ Q R R L +F +L Sbjct: 239 LKREQPQKAIVFCRTKRGTERITQRLSKKTKLVHCIHGDMQQGARNRALSDFKASKFRVL 298 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDV RG+ I V+H+ NYD+P+ +DYVHR+GRTGR G G + + E L Sbjct: 299 VATDVVGRGIDISDVSHIINYDIPEFSDDYVHRVGRTGRMGKEGIAYTFVTPEEGNELTR 358 Query: 371 IETYI 375 IE I Sbjct: 359 IEVRI 363 >UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular organisms RepID=Q3AX69_SYNS9 Length = 624 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 136/350 (38%), Positives = 202/350 (57%), Gaps = 14/350 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F +++ L KG+ + +PIQ A P + GRD+ GQAQTGTGKT AF Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQ 127 L S P+ L++APTRELA+Q+ AD+ A A G LK+ YGG + Q Sbjct: 133 LESGQ-------KTPQVLVLAPTRELAMQV-ADSFK-AYAAGHPHLKVLAVYGGTDFRSQ 183 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L GVD+++GT GR++D+ +Q ++ + +VLDEAD M +GFI D+ W+ ++P Sbjct: 184 ISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLP 243 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R +LFSAT+ +R L+ +N+ + ++ + + G I++ K+ L Sbjct: 244 --KERQVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKDQDGKLIRQRAITVPMSHKLEAL 301 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 Q +++ + IIFA TK + L A GH+V +L GDV Q +R R ++ G + Sbjct: 302 QRVLDACGGEGVIIFARTKVITLTVAETLEAAGHQVAVLNGDVPQNQRERTVERLRSGSV 361 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 D+LVATDVAARGL + + V NYD+P D E YVHRIGRTGRAG +G ++ Sbjct: 362 DVLVATDVAARGLDVERIGLVINYDMPFDSEAYVHRIGRTGRAGRTGEAV 411 >UniRef50_B3CMR4 ATP-dependent RNA helicase, DeaD/DeaH box family n=11 Tax=cellular organisms RepID=B3CMR4_WOLPP Length = 408 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 140/363 (38%), Positives = 209/363 (57%), Gaps = 13/363 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L + +AL K TPIQ A+PL L G+D+ G AQTGTGKT+AF Sbjct: 4 FHEMGLPTLLRQALSKNNLCVPTPIQVQAIPLALQGKDILGSAQTGTGKTLAFAIPLVAK 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPL-AEATGLKLGLAYGGDGYDKQLK 129 L++ P+I AL++ PTRELA Q+ ++ L ++++ L++ L GG+ +QL Sbjct: 64 LMNEPSIGS-------ALVIVPTRELAHQVTSEIRKLLSQSSLLRVALLIGGEPIFRQLN 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ I+IGT GR+ID+ ++ + + ++VLDE DRM+D+GF I + + +P Sbjct: 117 QLQKKPQIIIGTPGRIIDHIERKTLVTRNVGILVLDETDRMFDMGFGIQIEEIMKHLPKI 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM-RLLQ 248 Q L +FSATL + +L + +N E + V+ + T +IK+E+ Y S EK +L+ Sbjct: 177 RQTL--MFSATLPGEIVKLTEKYLNQPERVSVDCQATTSVKIKQEVVYASESEKYGKLVT 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L + + IIF TK +++ L D + + GD+ Q KR R++D F RG Sbjct: 235 QLCQRKGS--IIIFVKTKRGADQLADKLHKDDYSALAIHGDLRQHKRERVIDSFRRGRNQ 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 I+VATDVA+RGL IP + HV NYD+P DYVHRIGRT RAGA G ++S + L Sbjct: 293 IMVATDVASRGLDIPHIQHVINYDVPQSQADYVHRIGRTARAGAEGFALSFVTPQDKRRL 352 Query: 369 PAI 371 PA+ Sbjct: 353 PAL 355 >UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY81_9PLAN Length = 458 Score = 245 bits (625), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 135/375 (36%), Positives = 205/375 (54%), Gaps = 7/375 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 ++ T + F+ L +++ ALEK G+ TPIQA +P L G DV GQA+TGTGKT Sbjct: 4 LTGTDAPKPTFASMDLSDQMMAALEKAGYEYPTPIQAGLIPRALEGVDVVGQARTGTGKT 63 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +F+ L +R P+ALI+ PTRELAVQ+ + L+E + YG Sbjct: 64 ASFVIPILELL-----DIERGAPTPQALILVPTRELAVQVRDEVVKLSEGLKINCAAVYG 118 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Q+ L+ G +++GT GR++D+ + I+ I+ VVLDEADRM D+GF DI Sbjct: 119 GKPIKSQVDKLKKGCHVVVGTPGRVLDHIARGTIDFTHIECVVLDEADRMLDIGFRPDIE 178 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + +R P +R +L SAT+ + +LA M E + P + I+++ F + Sbjct: 179 RILKRCP--RERQTLLLSATVPPPIAKLAQRYMYEPEMLNFSPADVSVDTIEQKYFTVEH 236 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 + K LL L+ E P +AI+F TK ++++ L + GD++Q +R R++ Sbjct: 237 DRKFDLLMKLLLREEPKQAIVFCRTKRGTDKVYQKLTKKLGNTAAIHGDLSQGQRDRVMA 296 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F G + LVATDV RG+ + V+H+ N+D+P C+DYVHR+GRTGR G G + + Sbjct: 297 GFRDGSVRYLVATDVIGRGIDVSTVSHIVNFDIPVFCDDYVHRVGRTGRMGREGVAYTFV 356 Query: 361 CEEYALNLPAIETYI 375 C + L IE I Sbjct: 357 CPDEGHELTRIEERI 371 >UniRef50_A9BJS7 DEAD/DEAH box helicase domain protein n=2 Tax=cellular organisms RepID=A9BJS7_PETMO Length = 530 Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 136/356 (38%), Positives = 202/356 (56%), Gaps = 13/356 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRD-VAGQAQTGTGKTMAFLTSTF 68 KF L ++ A+++KG+ TPIQ +PL L+G++ V GQAQTGTGKT AF Sbjct: 3 KFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLI 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L D K N +AL++ PTRELA+Q+ + + L L L YGG Q+ Sbjct: 63 ERL-------DEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQI 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ VD+++GT GR+ID+ + +++ I+ +V+DEAD M D+GFI+D+ + + Sbjct: 116 RALKRRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNK 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQK---TGHRIKEELFYPSNEEKMR 245 Q L +FSAT+ R+ LA + M N E + E K T + K+ + S K+ Sbjct: 176 EKQIL--MFSATMPQRIVTLARKHMGNFETVTTVQENKEDITVKKAKQIYYMISESNKIE 233 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL LI+ + ++F TK + EEI L G+ L GDV+Q +R RI+D F Sbjct: 234 LLSRLIDIDTNFYGLVFTKTKVQSEEIANELIKKGYEAEALNGDVSQNQRERIMDRFKSK 293 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 + IL++TDVAARG+ I + +V NY LP + E+Y+HRIGRT RAG G +I+ Sbjct: 294 RIKILISTDVAARGIDIDNLKYVINYSLPQNPENYIHRIGRTARAGNEGTAITFVT 349 >UniRef50_B5IG60 DEAD/DEAH box helicase domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IG60_9EURY Length = 451 Score = 244 bits (624), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 141/371 (38%), Positives = 208/371 (56%), Gaps = 14/371 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF D ++ AL++ F T +Q A+PL + GRD+ Q++TG+GKT+AFL F Sbjct: 5 KFEDMSISKGTKNALKEHNFVEPTEVQEKAIPLAIKGRDLIVQSKTGSGKTLAFLIPIFE 64 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L S A+++ PTRELA Q+ A + +A G + + YGG ++Q+ Sbjct: 65 NLNSGL----------EAIVLVPTRELAQQVERVARSIGKAHGKRTVVIYGGAPMERQIA 114 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ G ++IGT GR++D ++ ++NL I+ VLDEADRM D+GFI DI+W+ ++ P Sbjct: 115 GLK-GASMVIGTPGRVMDLMRRGYLNLNGIRFFVLDEADRMLDMGFIDDIKWILQKTPKD 173 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q MLFSAT+ + LA M N E I + ++ T + + K+ L + Sbjct: 174 KQM--MLFSATMPPEIISLARRYMKNPEKIILSEDEITAENVAQYYVEVGEINKIAKLSS 231 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ E + +IF NT+ + + I L G + L GD+ Q R R +D F +G +DI Sbjct: 232 LLISE-RGKYLIFCNTRRKTKNIAEILQKYGFKAFALHGDMRQATRTRTMDAFKQGKIDI 290 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LV+TDVAARG+ + +THV NYD+P +DYVHRIGRTGR A G +I+ E Sbjct: 291 LVSTDVAARGIDVHGITHVVNYDVPLYPKDYVHRIGRTGRMDAHGKAITFVTREDKEYFR 350 Query: 370 AIETYIGHSIP 380 IE +IG IP Sbjct: 351 RIEDFIGKRIP 361 >UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gammaproteobacteria RepID=Q12QV2_SHEDO Length = 433 Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 138/371 (37%), Positives = 207/371 (55%), Gaps = 6/371 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF F+ P+++ A+ + G+ N TP+Q A+P G DV AQTGTGKT AF Sbjct: 2 KFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQ 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + P + RALI+ PTRELA Q+ + ++ + + YGG Q + Sbjct: 62 KMHERPMTVQH--SNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQ 119 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ G DI++ T GRL+++ +++L ++ +VLDEADRM D+GF DI+ + + + Sbjct: 120 KLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVN-- 177 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR-LLQ 248 +R N+LFSAT S V++LA + ++ + I + + T + ++ YP + + R LL Sbjct: 178 KKRQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAATV-SQVVYPVEQRRKRELLS 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI + + ++F T+ +++ L DG ++ G+ AQ R R L EF G + Sbjct: 237 ELIGTKNWQQVLVFTATRADADKLVTELNLDGIPSAVVHGEKAQGSRRRALREFIEGKVR 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVAT+VAARGL I + +V NYDLP EDYVHRIGRTGRAG +G +IS E L Sbjct: 297 VLVATEVAARGLDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTL 356 Query: 369 PAIETYIGHSI 379 IE IG I Sbjct: 357 ADIEKLIGQKI 367 >UniRef50_Q30YG9 DEAD/DEAH box helicase-like n=9 Tax=Deltaproteobacteria RepID=Q30YG9_DESDG Length = 530 Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 147/395 (37%), Positives = 216/395 (54%), Gaps = 10/395 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ F+LHP ++EA+ +GF N TPIQ ALP LAG+D+ G A TGTGKT AF+ H Sbjct: 58 FARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLHR 117 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 LL A + RAL++APTREL QIH + + LA L+ YGG G Q Sbjct: 118 LLLQGESARGTL---RALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQTVQ 174 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L +GVDI++ GRL+D+ ++ H +L + ++VLDEAD M+D+GF+ D+R + Sbjct: 175 LRTGVDIVLACPGRLLDHVRRGHADLSHVDMLVLDEADMMFDMGFLSDVREILHCTRVRK 234 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q MLFSAT+ +RELA E + IE++ ++ L K LL+ + Sbjct: 235 Q--TMLFSATMPAPLRELAEECLRQPVRIELD-TCAIAPTVRHSLCPVPKHLKTPLLKYV 291 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + D ++F T+H +W L G L G+++Q +R L+ F RG ++ Sbjct: 292 LRAFARDSVLVFVRTRHGARRLWQQLVKSGIEATCLQGNLSQGRRRAALEGFRRGTFRVM 351 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ + V +V NYD P E VHR GRTGRA SG +++ +E + Sbjct: 352 VATDIAARGIDVSQVGYVINYDFPPSVEACVHRAGRTGRASNSGVALTFVTQEDEPQVRT 411 Query: 371 IETYIGHSIP---VSKYNPDALM-TDLPKPLRLTR 401 +E +G ++ ++ AL T+ +P RL R Sbjct: 412 LERVLGGALSRWHAEGFDYSALQRTEAARPARLRR 446 >UniRef50_Q484Q1 RNA helicase DeaD n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484Q1_COLP3 Length = 611 Score = 244 bits (623), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 142/352 (40%), Positives = 204/352 (57%), Gaps = 14/352 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ L ++ A+ GF + T IQAL +P LAG+DV G+AQTGTGKT AF Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAF------- 69 Query: 71 LLSHPAIA--DRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQ 127 PA+A D + +P+ +++APTRELA+Q+ E + GL++ YGG Y Q Sbjct: 70 --GLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQ 127 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + LE G +++GT GRL+D+ ++ + L ++V VLDEAD M ++GF++DI+W+ +P Sbjct: 128 FQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIP 187 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 Q LFSAT+ +R++A + + E+I+V +K I + + S KM L Sbjct: 188 KTAQMC--LFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGITKMTAL 245 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + + E D IIF T++ +I L G+ L GD+ Q +R R +D+ G Sbjct: 246 ERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKS 305 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 ILVATDV ARGL IP ++ V NYDLP D E YVHRIGRTGRAG G SI+ Sbjct: 306 SILVATDVVARGLDIPRISLVINYDLPGDNEAYVHRIGRTGRAGREGMSIAF 357 >UniRef50_A9A5S3 DEAD/DEAH box helicase domain protein n=5 Tax=Thaumarchaeota RepID=A9A5S3_NITMS Length = 440 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 142/394 (36%), Positives = 212/394 (53%), Gaps = 14/394 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF + L +++ L GF PIQ +P+ L GRDV GQA TG+GKT AF S Sbjct: 3 KFQELGLKEDILKGLNDLGFEEAFPIQEAVIPVLLTGRDVVGQAHTGSGKTAAFSLSMLQ 62 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + I + LIMAPTRELA+QI + + + TG+K+ YGG G QL Sbjct: 63 EIQPKNGI--------QGLIMAPTRELAMQITDEIKKFGKYTGIKVATVYGGQGMGLQLD 114 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE GV+I++ T GRLID+ K+ I L + +VLDEAD M D+GFI DI ++ P Sbjct: 115 ALERGVEIVVATPGRLIDHLKRGSIELRDVTHIVLDEADTMLDMGFIDDIGFILDLAP-- 172 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 R+ LFSAT+ + L+ E +NN + ++ + +G I + + +K + L Sbjct: 173 EDRVMSLFSATMPTEILRLSEEYLNNPKQFLLDADDLSGEGIDQSYLVIKDRDKFKYLID 232 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 I+ +AI+F +TK+R ++ L + + GD++Q +R + + +F G DI Sbjct: 233 FIKPT-KGQAIVFCSTKYRTRDVAKFLHQEKFDAVAIEGDMSQHRREQSMGKFRSGKADI 291 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVA+RG+ +P V V NYD+P+ Y HRIGRT RAGA G +++ + Sbjct: 292 LVATDVASRGIDVPRVELVINYDVPNQEMAYFHRIGRTARAGAKGKAVTFVSYSSVGDWN 351 Query: 370 AIETYIGHSIPVSKYNPD-ALMTDLPKPLRLTRP 402 I+ I +P+ N + + +P PL+ P Sbjct: 352 LIKRQI--KVPIKDLNEEMGIEIAIPDPLKRQMP 383 >UniRef50_Q2BDP3 ATP-dependent RNA helicase n=2 Tax=Bacillus RepID=Q2BDP3_9BACI Length = 543 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 144/414 (34%), Positives = 222/414 (53%), Gaps = 12/414 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + ++ L +G T +Q A+P+ L GRD+ QAQTGTGKT+AF+ Sbjct: 24 FKHLGISDPLIHKLAAQGIDEPTAVQEKAIPIVLEGRDIIAQAQTGTGKTLAFILPILEK 83 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLK 129 + D +ALI+ PTRELA+QI ++ + L E L + YGG +KQL Sbjct: 84 I-------DPSNGSTQALIVTPTRELALQITSEVKKLIEDMPDLNVLAVYGGQDVEKQLH 136 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ I++ T GRL+D+ ++ + L + +VLDEAD+M +GF+ ++ + + P + Sbjct: 137 KLQRQTQIVVATPGRLLDHLRRGTVQLDEVSFLVLDEADQMLHIGFLNEMELIISQTPAS 196 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q MLFSAT+ +R+L+ + + E I +E I++ + ++ K L + Sbjct: 197 RQ--TMLFSATMPDDIRKLSKKHLKEPESIRIEKTFVPEKAIEQLAIFTTDRAKQNALIS 254 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 I E+ P AIIF T R +++ L + L GD+ Q KR +++ +F ++ Sbjct: 255 RIREDRPFLAIIFCRTIRRATKLYDALKSQRFSCEELHGDLTQAKREKVMKKFRNAEIQF 314 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVAARGL + VTHV+NYD+P D E YVHRIGRTGRAG G +++ E+ L Sbjct: 315 LIATDVAARGLDVEGVTHVYNYDIPQDSESYVHRIGRTGRAGKDGLAVTFYAEKDEAALK 374 Query: 370 AIETYIGHSIPVSKYNPDALMT-DLPKPLRLTRPRT-GNGPRRTGAPRNRRRSG 421 AIE + +P + A T D K +P+ + RR G +RRR+G Sbjct: 375 AIEQELNIRLPKEESTATANTTADGEKSSSGDKPKNRSDRDRRAGGAESRRRTG 428 >UniRef50_UPI00016C471F RNA helicase DeaD n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C471F Length = 572 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 140/376 (37%), Positives = 210/376 (55%), Gaps = 10/376 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 TE F+ L ++VE L G+ TPIQ A+P + G D+ G+A TGTGKT AF Sbjct: 19 TESGFAKLGLDSRLVERLTGLGYEEPTPIQREAIPPLIEGHDLIGRAATGTGKTAAFSLP 78 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 H L A +P +LI+ PTRELA+Q+ + G+++ YGG D+ Sbjct: 79 ILHGLARSTA-----RTKPTSLILVPTRELAMQVAESVAKYGQPLGVRVLPIYGGAPMDQ 133 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q++ L+ G+D+++ T GR +D+ ++ + L AI VVVLDEAD M D+GF +DI + Sbjct: 134 QIRALDRGIDVVVATPGRALDHMRRTTLKLDAITVVVLDEADEMLDMGFAEDIEAILAAT 193 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGH---RIKEELFYPSNEEK 243 P +R LFSAT++ R++ +A + + NA I V + ++++ + + K Sbjct: 194 P--TERQTALFSATMAPRIKAIAVKHLKNATEIHVTRDPVPAGELPKVRQTAYVVQRQYK 251 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 + L +++ E P A+IF T+ +E+ L G+R L G +AQ R R++ F Sbjct: 252 LAALGRVLDGESPAAALIFCKTRSEVDELTEALGGRGYRPEALHGGMAQDARDRVMRLFR 311 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G ++LVATDVAARGL + +THV N+ LP E+YVHRIGR GRAG G +I++A Sbjct: 312 AGQANLLVATDVAARGLDVEHLTHVVNFSLPLGIENYVHRIGRVGRAGREGVAITVAEPR 371 Query: 364 YALNLPAIETYIGHSI 379 L AIE + G I Sbjct: 372 EQGALRAIERHTGQRI 387 >UniRef50_C6WM51 DEAD/DEAH box helicase domain protein n=83 Tax=Actinobacteria (class) RepID=C6WM51_ACTMD Length = 609 Score = 244 bits (622), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 137/352 (38%), Positives = 206/352 (58%), Gaps = 12/352 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F++ + ++V AL + G IQ L LPL LAG DV GQA+TGTGKT+ F Sbjct: 54 FTELGVREEIVRALGEAGIERAFAIQELTLPLALAGEDVIGQARTGTGKTLGFGIPLLQR 113 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +++ P+AL++ PTREL +Q+ D ++ +++ YGG Y+ Q+ Sbjct: 114 VITP------GDGTPQALVVVPTRELCLQVTHDLTDASKHMDVRVLAIYGGRPYEPQIAA 167 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+++GT GRL+D A+Q H+ LG ++ +VLDEAD M DLGF+ DI + R +P + Sbjct: 168 LRKGVDVVVGTPGRLLDLAEQRHLVLGKVRSLVLDEADEMLDLGFLPDIERVLRMVP--D 225 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTG--HRIKEELFYPSNE-EKMRLL 247 +R MLFSAT+ + LA +N ++ E E G H E+ Y ++ +K+ LL Sbjct: 226 ERQTMLFSATMPGPIITLARTFLNQPTHVRAE-ENDAGAVHERTEQFIYRAHALDKVELL 284 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +++ ++IF TK +++ +A G V + GD+ Q R + L F G + Sbjct: 285 ARVLQARDRGLSMIFTRTKRTAQKVADDMAERGFAVAAVHGDLGQGAREQALRAFRSGKI 344 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 D+LVATDVAARG+ + VTHV NY P+D + YVHRIGRTGRAG +G +++L Sbjct: 345 DVLVATDVAARGIDVEGVTHVVNYQCPEDEKTYVHRIGRTGRAGRTGVAVTL 396 >UniRef50_Q480Z7 ATP-dependent RNA helicase, DEAD box family n=2 Tax=Alteromonadales RepID=Q480Z7_COLP3 Length = 399 Score = 244 bits (622), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 4/377 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F F+L +++ + KG+ TPIQ +P + G D+ G AQTGTGKT AF + Sbjct: 3 EFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIIN 62 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + D K R+LI+ PTRELA QI + + ++ GLK + YGG G Q+ Sbjct: 63 KFGRNKI--DIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVD 120 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 +E G+DIL+ T GRL+D + IN A++V VLDEAD M D+GF KD++ + ++P + Sbjct: 121 SIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKS 180 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q L LFSAT+ + LA + + I++ E T + + +++ K+ LL Sbjct: 181 RQTL--LFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPLLFN 238 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++ + ++ +IF TK+ + I L L Q R L F L + Sbjct: 239 ILTKADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRV 298 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARG+ + +T V NY+LP+D +Y+HRIGRT RAG SG +IS A E L Sbjct: 299 LVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVENDIRQLT 358 Query: 370 AIETYIGHSIPVSKYNP 386 IE IG IPV P Sbjct: 359 NIENSIGQVIPVVTEQP 375 >UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales RepID=A2U4F0_9FLAO Length = 411 Score = 243 bits (621), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 139/377 (36%), Positives = 213/377 (56%), Gaps = 3/377 (0%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +FSD L+ + +A+ + FH T +Q +PL L ++V AQTGTGKT AF + Sbjct: 2 QFSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIIN 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L A++ + +AL++ PTRELA+QI + + ++ + L+ +GG + Q + Sbjct: 62 LLFDKQD-AEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKE 120 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 +L GVDIL+ T GRLID Q +I+L +++ VLDEAD M D+GFI DI+ + + P Sbjct: 121 ILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRK 180 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q L LFSAT+ ++ EL+ + NA +++ PE+ T I + L+Y + K L Sbjct: 181 KQTL--LFSATIPEKIDELSKSIVKNATKVDINPEETTAKNIGQLLYYLPKKNKTDLCLH 238 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ + IIF TK +++ L +G+ V + GD Q R + +++F I Sbjct: 239 LLRNTINGKIIIFRRTKFAVDKLEQTLIKNGYNVASIHGDKTQGVRNKAIEDFKSKKASI 298 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVAARG+ I V + N+D+P+ E YVHRIGRTGRAG SG + S + + Sbjct: 299 LIATDVAARGIDITNVDAIINFDIPNVPEIYVHRIGRTGRAGKSGIAFSFCSPDENNYIA 358 Query: 370 AIETYIGHSIPVSKYNP 386 +IE I SI V + +P Sbjct: 359 SIENLIEKSIKVIEDHP 375 >UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKQ8_FERNB Length = 571 Score = 243 bits (621), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 143/379 (37%), Positives = 217/379 (57%), Gaps = 16/379 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLA-GRDVAGQAQTGTGKTMAFLTST 67 ++F DF L +++ A++KKG+ T IQ + LP L+ +D+ QAQTGTGKT AF Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPL 77 Query: 68 FHYLLSHPAIADRKVNQ-PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 + D K N+ +A+I+ PTRELA+QI + + L +K+ YGG +K Sbjct: 78 LERI-------DFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEK 130 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q K LE GVDI++GT GR+ID+ ++ ++L ++ +VLDEADRM D+GF+ D+ + +R Sbjct: 131 QFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKR- 189 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 N+R LFSAT+ + ++A + M ++ ++ T ++ F ++K+ L Sbjct: 190 TGENKR-TFLFSATMPKEIVDIARKFMKEYIHVSTVKDELTTENAEQLYFEVDEKDKLPL 248 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L +I+ I+F TK +EI L G+ L GD +Q +R R+LD+F + Sbjct: 249 LCRIIDMNPDFYGIVFCQTKLEVDEISKKLLDLGYNADGLHGDYSQYQRERVLDKFRKKQ 308 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 L ILV TDVAARG+ I +THV NY +P D E YVHRIGRTGRAG G +I+ + Sbjct: 309 LRILVTTDVAARGIDIDGLTHVINYSVPRDPEYYVHRIGRTGRAGKKGFAITFVTRDDYF 368 Query: 367 NLPAIETY-----IGHSIP 380 + ++ + I SIP Sbjct: 369 HFARVKRFAKAKIIKDSIP 387 >UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIQ5_FIBSS Length = 802 Score = 243 bits (621), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 144/372 (38%), Positives = 206/372 (55%), Gaps = 10/372 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L P+V+EA++ G+ +PIQA A+P L G ++ G AQTGTGKT AF Sbjct: 126 FDDLGLSPEVLEAVKLAGYETPSPIQAKAIPALLQGANLLGTAQTGTGKTAAFSLP---- 181 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQLK 129 LLS R+ + L++ PTRELA+Q+ + A + + + YGG QL+ Sbjct: 182 LLSRINFNGRETSM---LVLTPTRELAIQVSDAIQQYAVKMQNVTVVPVYGGQDIAIQLR 238 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ I++ T GRLID+ K+ I+LGA++ +VLDEAD M D+GF++D+ + + +P Sbjct: 239 ALKRKASIVVATPGRLIDHIKRGSISLGAVKAIVLDEADEMLDMGFMEDVETILKEIPAD 298 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 QR LFSAT+ V+++ + + E +E + T I + NE K+ L Sbjct: 299 AQR--ALFSATMPDSVKKIIDQHLGEYEEARIEGKTTTVENICQRYLLVKNEHKIEALAR 356 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E E D +IF TK E+ L + G V L GD+AQ R R ++ G LDI Sbjct: 357 VLEGEEFDGVLIFVRTKQNTTEVAEKLESRGFNVAPLNGDLAQSMRERTINRLKMGKLDI 416 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 +VATDVAARG+ + ++ V NYD+P D E YVHRIGRTGRAG SG++I L Sbjct: 417 VVATDVAARGIDVDRISLVVNYDIPYDTESYVHRIGRTGRAGRSGNAILFITPREKRMLK 476 Query: 370 AIETYIGHSIPV 381 IE I V Sbjct: 477 TIEKATRQPIDV 488 >UniRef50_B6IS62 DEAD/DEAH box helicase protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IS62_RHOCS Length = 528 Score = 243 bits (621), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 144/365 (39%), Positives = 211/365 (57%), Gaps = 5/365 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FSD L P +++A+E+ GF TPIQ ALP L GRDV A TGTGKT AF+ + Sbjct: 10 FSDLGLLPHLLKAVEELGFTTPTPIQQQALPAALTGRDVVASANTGTGKTAAFVLPSLQR 69 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + + A A+ PR L++ PTRELA Q+ L++ ++ G GG Y +QL++ Sbjct: 70 IATT-ARAEAAWG-PRVLVLTPTRELASQVLESVRNLSKFGRIQTGTILGGMPYRQQLEM 127 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L VD+++ T GRL+D+ ++ ++L ++V+VLDEADRM D+GF + + ++ P Sbjct: 128 LRRRVDLIVATPGRLMDHMERGRLDLSGVEVLVLDEADRMLDMGFREAVEFIAAACP--A 185 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLLQT 249 +R +LF+ATL LA + I+V + ++++ E K RLL+T Sbjct: 186 ERQTLLFTATLDRTAERLAQTLTRDPVRIDVAGKAVVTAQVEQRWLRADGLEHKHRLLET 245 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ E + I+F TK + + L+ GH+ L GD+ Q+ R R++ G +++ Sbjct: 246 LLGGEEFGKGIVFIATKLDADRLADTLSEKGHKAMPLHGDMQQRDRNRVVQWLRDGRINV 305 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 +VATDVAARG+ I +THV N+DLP EDYVHRIGRTGRAGASG S SL + Sbjct: 306 IVATDVAARGIDIADLTHVINFDLPKQAEDYVHRIGRTGRAGASGVSYSLFTRMEWRQVR 365 Query: 370 AIETY 374 AIE Y Sbjct: 366 AIEAY 370 >UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24 Tax=Gammaproteobacteria RepID=Q485D3_COLP3 Length = 455 Score = 243 bits (621), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 143/377 (37%), Positives = 208/377 (55%), Gaps = 17/377 (4%) Query: 14 FALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF-------LTS 66 L +++A++ G+ N TPIQ A+P+ G D+ AQTGTGKT AF + Sbjct: 6 IGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAIAK 65 Query: 67 TFHYLLSHPAIADRKVNQP--------RALIMAPTRELAVQIHADAEPLAEATGLKLGLA 118 H S D + RALI+ PTRELA Q+ + + ++ +K G+ Sbjct: 66 ANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVV 125 Query: 119 YGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKD 178 YGG Q K+L+ G+D+L+ T GRL+++ +++L ++ +VLDEADRM D+GF+ D Sbjct: 126 YGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMGFLTD 185 Query: 179 IRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP 238 I L + +Q L +FSAT S RV+ LA + + + + I V E T +IK+ +++ Sbjct: 186 IEKLLLAVKHKHQTL--MFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAVYWV 243 Query: 239 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 + E K LL LI + ++FA TK + L DG + L GD Q R + Sbjct: 244 TEERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARNKA 303 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L++F+ G + +LVATDVAARGL IP + V N+ LP EDYVHR+GRTGRAG SG +IS Sbjct: 304 LEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKSGTAIS 363 Query: 359 LACEEYALNLPAIETYI 375 L + L IE I Sbjct: 364 LVSPKDERFLENIEQLI 380 >UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9Z2_9RHIZ Length = 657 Score = 243 bits (620), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 146/407 (35%), Positives = 214/407 (52%), Gaps = 7/407 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 LT + F F + AL + G+ TPIQ ALP L GRD+ G A+TG+GKT F+ Sbjct: 23 LTIENFEAFGFAEPLSRALTQCGYVTPTPIQVQALPPQLEGRDLLGMAETGSGKTATFVL 82 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + S + K Q AL++APTRELA+QI + LA ++ + GG Sbjct: 83 PLLQKIASQNSEPAPK--QVLALVLAPTRELAIQIDQEVASLARNMRIRRAVVLGGVSKG 140 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L+ GV +L+ T GRL+D +L ++ +VLDEADRM+D+GFI+DI+ + Sbjct: 141 PQINALKRGVHVLVATPGRLLDLINMRTCDLSRVETLVLDEADRMFDMGFIRDIKKIVAM 200 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P A R LFSAT+ +++ A++ + +++ + RI +++ EK Sbjct: 201 LPEA--RRTALFSATMPVEIKKFAYDILKEPYRVDLSSKSVVVDRIDQKVMIVRTTEKQS 258 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L T++ +E R I+F TK + + L G G+ AQ R R L++F G Sbjct: 259 RLHTILADEACKRVIVFTRTKRGADRVAERLGMAGISASAFHGNKAQNARQRALNDFMMG 318 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 + +LVATD+AARG+ + +THV N+D+P D E YVHR+GRT R G SG +ISL Sbjct: 319 HIRVLVATDIAARGIDVSNITHVVNFDMPLDPETYVHRVGRTARKGNSGIAISLCDPGER 378 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG 412 + AIE + + V D LP P R R GPRR G Sbjct: 379 QEITAIERMMKQKLEVIA---DVGGEALPMPERRQHHRAETGPRRDG 422 >UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=C7HXF4_THIIN Length = 666 Score = 243 bits (620), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 153/371 (41%), Positives = 206/371 (55%), Gaps = 13/371 (3%) Query: 6 LTEQKFSDFA---LHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 +T Q+ S FA L +++AL G+ +PIQA +P LAGRDV GQAQTGTGKT A Sbjct: 1 MTSQQISPFAELGLPEPLLQALRDVGYETPSPIQAATIPPLLAGRDVLGQAQTGTGKTAA 60 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQI-HADAEPLAEATGLKLGLAYGG 121 F A D +AL++APTRELA+Q+ A A G + YGG Sbjct: 61 FALPIL-------AKIDCNARHTQALVLAPTRELAIQVAEAFARYATHLPGFNVLPIYGG 113 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y QL L+ G +++GT GR+ID+ ++ + L + +VLDEAD M +GFI D+ Sbjct: 114 QSYVPQLASLKRGAHVVVGTPGRIIDHLERGTLKLDQLAHMVLDEADEMLRMGFIDDVES 173 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + ++ PP QR LFSAT+ +R +A + + + I ++ T I++ + S Sbjct: 174 ILKKTPP--QRQVALFSATMPSAIRRIAQTYLRDPQEITIKAATTTATHIQQRYWMVSGL 231 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K+ L ++E E + IIFA TK EE+ LAA G L GDV Q R R++ Sbjct: 232 HKLDALTRILEVEPFEGMIIFARTKQATEELAEKLAARGFTAAALNGDVPQALRERMVQR 291 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 G LDILVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 292 LKDGQLDILVATDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAILFVT 351 Query: 362 EEYALNLPAIE 372 L AIE Sbjct: 352 PRERHLLRAIE 362 >UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID=O97032_DUGJA Length = 781 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 140/367 (38%), Positives = 205/367 (55%), Gaps = 6/367 (1%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 S T++ E F + L P + + + TPIQ A+P L RD+ AQTG+GKT Sbjct: 178 SATNVIE-NFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTA 236 Query: 62 AFLTSTFHYLLSHPAIADR--KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAY 119 AFL ++L+ R K P+ LI+APTRELA+QI ++++ + T L+ + Y Sbjct: 237 AFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVY 296 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Q++ ++ G +L+ T GRL+D+ ++N I+L + +VLDEADRM D+GF I Sbjct: 297 GGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQI 356 Query: 180 RWLFR--RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFY 237 R + MP R ++FSAT +++LA + + N ++ V T IK+E+ Y Sbjct: 357 RKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIY 416 Query: 238 PSNEEKMRLLQTLIEEEWPDRAI-IFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 ++ EK+ L+ + P+ I IF TK + + L + G+ V + GD +Q +R Sbjct: 417 MTDVEKLNYLKNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVERE 476 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 L F G ILVAT VAARGL IP V HV NYDLP D E+YVHRIGRTGR G G + Sbjct: 477 AALSMFRNGQCPILVATAVAARGLDIPNVKHVINYDLPSDIEEYVHRIGRTGRLGNHGRA 536 Query: 357 ISLACEE 363 S ++ Sbjct: 537 TSFYVDK 543 >UniRef50_A0JYP4 DEAD/DEAH box helicase domain protein n=14 Tax=Actinomycetales RepID=A0JYP4_ARTS2 Length = 585 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 154/450 (34%), Positives = 230/450 (51%), Gaps = 36/450 (8%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + E+ F+D+ + +VE+L G + PIQA+ LP+ LAG D+ GQA+TGTGKT+ F Sbjct: 33 EIEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLGFG 92 Query: 65 TSTFHYLLSH--PAIADRKV-NQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 ++ P V P+AL++ PTRELAVQ+ D E A ++ YGG Sbjct: 93 IPALQRVVGRDDPGFDKLAVPGAPQALVIVPTRELAVQVAKDLENAARKRNARIATIYGG 152 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y+ Q+ L+ GV+I++GT GRLID KQ H++L +++V+LDEAD M DLGF+ D+ Sbjct: 153 RAYEPQVDSLQKGVEIVVGTPGRLIDLYKQKHLSLKNVKIVILDEADEMLDLGFLPDVET 212 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEV---EPEQKTGHRIKEELFYP 238 L P Q L LFSAT+ V +A M +I + E T I++ ++ Sbjct: 213 LIAGTPAVRQTL--LFSATMPGPVIAMARRYMTQPTHIRAADPDDEGLTKRDIRQLIYRA 270 Query: 239 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 + +K+ ++ +++ R IIF TK ++ L G + GD+ Q R + Sbjct: 271 HSMDKIEVVARILQARGRGRTIIFTKTKRTAAKVAEELVDRGFAAAAIHGDLGQGAREQA 330 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L F +D+LVATDVAARG+ + VTHV NY +D + Y+HR+GRTGRAG G +++ Sbjct: 331 LRAFRNNKVDVLVATDVAARGIDVDDVTHVINYQCVEDEKIYLHRVGRTGRAGNKGTAVT 390 Query: 359 LACEEYALNLPAIETYIGHSI--PVSKYN-----------PDALMTDLPKPLRL------ 399 + I +G S+ PV Y+ P+ LP+ R+ Sbjct: 391 FVDWDDMPRWGLINKALGLSVPEPVETYSSSPHLYEELDIPEGTKGRLPRDKRVLAGVDA 450 Query: 400 --------TRPRTGNGPRRTGAPRNRRRSG 421 T +TG G R G R+ R G Sbjct: 451 EVLEDLGETGKKTGRGSARDGG-RDTARGG 479 >UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFK3_METVO Length = 584 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 139/354 (39%), Positives = 205/354 (57%), Gaps = 6/354 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGR-DVAGQAQTGTGKTMAFLTSTF 68 +F D + ++E L++KGF T IQ A+P+ L DV GQAQTGTGKT+AF Sbjct: 2 EFRDLNISESIMERLDEKGFTEATQIQEKAIPIVLDTELDVVGQAQTGTGKTLAFGIPII 61 Query: 69 HYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + RK + +A+I+ PTRELA+Q+H + + + + L+L YGG +KQ Sbjct: 62 QKIQEKIEENGRKNKKAVKAIILTPTRELALQVHDEIDSVNKGNKLRLCTVYGGQSIEKQ 121 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L +GVDI+IGT GR+ID+ + + L I +VLDEAD M +LGFI D+ + + Sbjct: 122 INKLRNGVDIVIGTPGRVIDHLGRRTLKLNEIDFLVLDEADEMLNLGFIDDVEEIMSKCK 181 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRL 246 ++L LFSATL + EL M E I V+ + T + E+++Y E +K L Sbjct: 182 EDCRKL--LFSATLPKSIMELVELHMGEYETIRVKSKALTTE-LTEQIYYEVKEHDKFEL 238 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ +I++E ++F TK +++ L + + L GD+ QK+R L F Sbjct: 239 LRRIIDKEPGFYGLVFCKTKADVDQLMRRLNDENYSSEALHGDMNQKQRELALSRFKSHK 298 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +DI++ATDVAARG+ I +THV NYD+P + E YVHRIGRTGRAG G +I+ Sbjct: 299 IDIMIATDVAARGIDINELTHVINYDIPQNPEAYVHRIGRTGRAGNKGTAITFV 352 >UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepID=C0W1P0_9ACTO Length = 616 Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 147/405 (36%), Positives = 220/405 (54%), Gaps = 17/405 (4%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T F+D L V+ A+ + GF TPIQ A+P L GRD+ G AQTGTGKT AF Sbjct: 3 TMTTFADLNLPENVLSAITEMGFETPTPIQEQAIPHLLEGRDIVGIAQTGTGKTAAFGLP 62 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYD 125 +L+H D N +A+++APTRELA+Q E A +K+ YGG Y Sbjct: 63 ----MLAH---IDPGFNAVQAIVLAPTRELAMQSATAIESFAAHMPKVKVVTVYGGASYT 115 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+K L+SG +++GT GR+ID ++ + L + V+VLDEAD M +GF +D+ + Sbjct: 116 PQIKGLKSGAQVVVGTPGRVIDLIEKGALKLNNVSVLVLDEADEMLRMGFAEDVETIAAS 175 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 MP + +R+ LFSAT+ ++ +A + + + IEV + T I + + K+ Sbjct: 176 MPESGKRITALFSATMPDFIQRVADQHLTDPVRIEVARQSSTVENIHQTYAVVPFKHKLG 235 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L ++ D AI+F T+ +E+ +A G ++GDV+Q +R RI+ G Sbjct: 236 ALGRVLATRDEDAAIVFVRTRVDADEVAVDMATRGFTAAAISGDVSQNERERIVSRLRDG 295 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 LD+LVATDVAARGL + + V N+D+P + E YVHR+GRTGRAG +G S++ + Sbjct: 296 SLDVLVATDVAARGLDVERIGLVINFDVPRETEAYVHRVGRTGRAGRAGRSLTFFTPKEQ 355 Query: 366 LNLPAIETYIGHS-----IP----VSKYNPDALMTDLPKPLRLTR 401 L IE G IP VS++ L++ +P + L R Sbjct: 356 FRLRQIEKLTGTKMEEIVIPSPREVSEFRARRLVSLMPDRIELGR 400 >UniRef50_B5JNP6 DEAD/DEAH box helicase domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNP6_9BACT Length = 436 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 148/420 (35%), Positives = 227/420 (54%), Gaps = 15/420 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ +L ++ +LE G+ TPIQA A+P+ L G D+ AQTG+GKT AF Sbjct: 3 FASLSLSDFLLRSLETLGYEEATPIQAAAIPVVLKGSDLLAAAQTGSGKTAAFSLPIIER 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLK--LGLAYGGDGYDKQL 128 L A + + +PR L++ PTRELAVQ+ A E AE K + +A+GG GYD Q+ Sbjct: 63 L----AGMEEQKAKPRFLVLVPTRELAVQVGAAIERYAEGAPRKARVLVAFGGVGYDAQM 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K +GV++++ T GRLID A++ + L ++++VLDEADR+ LGF +++ + +P Sbjct: 119 KAAYAGVEVVVATPGRLIDLAERRSVVLDEVEMLVLDEADRLLALGFAEELNTILEMLPE 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 Q N+LFSAT V LA + + IE+E + I + + LL+ Sbjct: 179 GRQ--NLLFSATFPQNVVSLANALLKDPVKIELEAASRPVESIAQRAIEVDGNSRTGLLR 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+E E +R ++F +K R E + L G + L G+++Q KR R L+ F + + Sbjct: 237 HLLETEGWERVLVFVGSKRRAENVTVKLQKHGIKAVALHGNMSQDKRARSLERFKQSKVR 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +L+ATDVAARG+ I + V NYDLP DYVHRIGRTGRAG SG +++ ++ + Sbjct: 297 VLMATDVAARGIDIAGLPCVVNYDLPRSAADYVHRIGRTGRAGESGLAVNFITDDKDAHF 356 Query: 369 PAIETYIGHSIP---VSKYNPDALMTDLP----KPLRLTRPRTGNGPRRTGAPRNRRRSG 421 IE G + + + P+ + P P++ RP + R+ A + R G Sbjct: 357 RLIEKKNGLRLERERLEGFVPENWNPEDPAKGKAPVKGKRPSKKDKLRKAAAGKARGSGG 416 >UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Clostridium RepID=B8I5B1_CLOCE Length = 542 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 133/366 (36%), Positives = 205/366 (56%), Gaps = 9/366 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F++ + +++A++ GF T +Q+ A+P L D+ ++TG+GKT F S Sbjct: 5 FNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ- 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L++P A P+ LI+ P RELAVQ+ D +A+ K YG + + ++ Sbjct: 64 -LTNPEEAG-----PQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQI 117 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GV I+ GT GR+ D+ ++ I+ +VLDEADRM D+GF+ + + + +P Sbjct: 118 LNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLP--K 175 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R+ +LFSAT+ + + MNN IE+E + KT I + + + EK L L Sbjct: 176 ERITLLFSATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVYYRVNYNEKNTQLNRL 235 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E P+ +IF NTK + + L G+ L GD+ Q KRL + +F +G IL Sbjct: 236 LIVEKPESCMIFCNTKAAVDRVQSFLGKKGYSSRALHGDIPQSKRLNTIQQFKQGKFHIL 295 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARG+HI ++ V NYD+P+D ++YVHRIGRTGRAG G + SL + ++L Sbjct: 296 VATDVAARGIHIEDLSLVINYDVPNDKDNYVHRIGRTGRAGHEGRAFSLVTGDDIISLYE 355 Query: 371 IETYIG 376 IE +IG Sbjct: 356 IEEHIG 361 >UniRef50_C7PCT4 DEAD/DEAH box helicase domain protein n=20 Tax=Bacteria RepID=C7PCT4_CHIPD Length = 444 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 150/412 (36%), Positives = 226/412 (54%), Gaps = 21/412 (5%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F +F L +V++ ++ G+ TP+Q +P +AG+D+ AQTGTGKT AFL H Sbjct: 3 FDEFDLDDRVLDGIDAMGYTTATPVQEKVIPPIIAGKDILACAQTGTGKTAAFLLPILHR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG---YDKQ 127 L++ P A RK+N +LI+ PTRELAVQI E ++ T + YGG + + Sbjct: 63 LITEPHDA-RKIN---SLIIVPTRELAVQIAQTLEGMSYFTSVSSIAVYGGSNGALFAAE 118 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 K L SGVDI+I T GR+I + ++ L A++ +VLDEADRM D+GF DI + +P Sbjct: 119 KKALTSGVDIVICTPGRMIAHLNMGYVKLDAVKYLVLDEADRMLDMGFSDDIIRITSTLP 178 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R N+LFSAT+ ++R+LA + ++ E I + K +I +E F E+K L+ Sbjct: 179 --KERQNLLFSATMPDKIRKLALKILHQPEEINIA-ISKPPEKIVQEAFVVFEEQKTGLI 235 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + L+ + IIF + K +++ L V + D+ Q KR ++L +F L Sbjct: 236 KQLLARKEFGCIIIFCSRKQNVKQLTYELKKARFSVEEIHSDLEQDKREQVLMDFKNKKL 295 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATD+ +RG+ I + V NYD+P+D EDY+HRIGRT RA G + ++ E+ Sbjct: 296 KMLVATDILSRGIDIEDIDLVINYDVPNDAEDYIHRIGRTARAATDGTAYTIISEKEQRK 355 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDL----PKPLRLTRPRTGNGPRRTGAPR 415 IE +G PV+K A + + PKP R+G G R G R Sbjct: 356 FARIEEVLGK--PVTKAEVPAALGPVPEYSPKPF-----RSGGGKRPQGKKR 400 >UniRef50_A4BBH5 Probable ATP-dependent RNA helicase n=1 Tax=Reinekea blandensis MED297 RepID=A4BBH5_9GAMM Length = 448 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 138/369 (37%), Positives = 219/369 (59%), Gaps = 11/369 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ F LHPK+ A+E+ G+ T +Q ++P L G+D+ A+TG+GKT A+L H Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 +LS +RK R L+M PTRELA Q+ D E L + TGLK + GG + Q Sbjct: 62 VLS-----ERKPKAGIRVLVMVPTRELAQQVMKDCEALTQQTGLKTVIIRGGQEFQYQAS 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 +L +I+I T GR+ ++ +N +L ++ +VLDE DRM D+GF ++ + ++ Sbjct: 117 LLRRNPEIVIATPGRMTEHLNKNSTDLLDVECLVLDECDRMLDMGFRDEVLAIAGQI--R 174 Query: 190 NQRLNMLFSATLSYR-VRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 N +L SATL +R V +A + +N+AE+I+++PE + ++ +F K +L+ Sbjct: 175 NDHQTLLLSATLKHRGVSSVAKDILNDAEFIQIKPEMLQENIRQQRIFSDGPAHKTKLVD 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ E +AI+F T+ + EE+ +L RV L G++ Q +R RI+ F G +D Sbjct: 235 WLLSHETFQKAIVFTKTRVQAEELANNLRLHQKRVATLHGEIEQDERNRIMTRFRDGVVD 294 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL-ACEEYALN 367 ++VATD+AARGL + V V N+D+ +++VHR+GRTGRAG SG ++SL A +Y L Sbjct: 295 VIVATDLAARGLDVEGVDLVVNFDIAQSGDEHVHRVGRTGRAGQSGLAVSLVAAHDYNL- 353 Query: 368 LPAIETYIG 376 + +IE Y+G Sbjct: 354 MSSIERYLG 362 >UniRef50_A8L2H9 DEAD/DEAH box helicase domain protein n=2 Tax=Frankia RepID=A8L2H9_FRASN Length = 671 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 138/351 (39%), Positives = 201/351 (57%), Gaps = 7/351 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F++ + + V AL + G IQ L LPL L D+ GQA+TGTGKT+AF Sbjct: 106 FAEIGVRAETVAALAEVGIIRPFAIQELTLPLALERTDIIGQARTGTGKTLAFGIPIVQV 165 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + + AD +P+AL++ PTREL VQ+ AD GL++ YGG Y+ QL Sbjct: 166 VTAPDEGAD---GRPQALVVVPTRELCVQVTADIARAGLGRGLRVLSVYGGRAYEPQLSA 222 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L +GVDI++GT GRL+D A+Q ++L ++ +VLDEAD M DLGF+ D+ + +P Sbjct: 223 LRAGVDIVVGTPGRLLDLARQKALDLAGVRALVLDEADEMLDLGFLPDVERILAFLP--E 280 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSNEEKMRLLQ 248 QR MLFSAT+ V LA M ++ E E +T ++ +F +KM +L Sbjct: 281 QRHTMLFSATMPGPVISLARRFMTRPVHVRAEQPDEGRTVPNTQQHVFRAHALDKMEVLA 340 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ E A++F T+ +++ LA G + GD+ Q +R + L F G +D Sbjct: 341 RVLQAESRGLAMVFVRTRRTADKVAEDLARRGFAAAPVHGDLGQGQREQALRAFRAGKVD 400 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 +LVATDVAARG+ + VTHV NY P+D Y+HRIGRTGRAG SG +++ Sbjct: 401 VLVATDVAARGIDVGGVTHVVNYQCPEDEHAYLHRIGRTGRAGGSGVAVTF 451 >UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=Rhodobacterales RepID=A1B2U6_PARDP Length = 479 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 145/371 (39%), Positives = 209/371 (56%), Gaps = 4/371 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ + +V L G +PIQ ++P +AGRD+ G AQTGTGKT AF Sbjct: 69 FTRMGIDARVAINLPGLGIETPSPIQEKSIPGIVAGRDLLGLAQTGTGKTAAFGLPMLTR 128 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 LL+ + + RALI+APTRELA QI + + A T ++ GG + Q++ Sbjct: 129 LLNIGRKPEPRTC--RALILAPTRELATQIAENIDNYAIGTPIRQFRVVGGASINVQVQR 186 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 LE GVD+LI T GRLID ++ I+L + +VLDEAD+M D+GFI +R + + +P Sbjct: 187 LERGVDVLIATPGRLIDLIERGAIDLSQTRYLVLDEADQMLDIGFIHALRRIAKMLP--R 244 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +LFSAT+ + ELA +N+ + V P + +I + + + + +K LL Sbjct: 245 ERQTLLFSATMPKLMEELADSYLNDPLRVAVNPPGQAAEKIDQGVHFVNQGDKATLLAEY 304 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + + + AI+F TKH E++ L G +V + G+ +Q +R R L F G+ +L Sbjct: 305 LSKHVDELAIVFGRTKHGSEKLCKLLDKWGFKVAAIHGNKSQGQRERALASFRAGETKVL 364 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL IP V HV+NYDLP+ E+YVHRIGRT RAG G +I+ L A Sbjct: 365 VATDVAARGLDIPQVAHVYNYDLPNVPENYVHRIGRTARAGRDGRAIAFCSPTEIGELRA 424 Query: 371 IETYIGHSIPV 381 IE + I V Sbjct: 425 IEKAMKAKIAV 435 >UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteria RepID=Q5NZY2_AZOSE Length = 658 Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 138/366 (37%), Positives = 204/366 (55%), Gaps = 11/366 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F+ L +++AL + G+ +PIQA+ +P LAG D+ G+AQTGTGKT AF Sbjct: 44 ESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLL 103 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGDGYDKQ 127 L D V P+ L++APTRELA+Q+ + A+ G + YGG Q Sbjct: 104 DRL-------DLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQ 156 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L+ L G +++GT GR++D+ ++ +NL ++ +VLDEAD M +GFI D+ W+ + P Sbjct: 157 LRQLARGAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTP 216 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R LFSAT+ +R +A + ++++ T ++ S K+ L Sbjct: 217 --AERQTALFSATMPDAIRRVAHRYLREPREVKIKASTTTVSTTRQRYCQISVAHKLDAL 274 Query: 248 QTLIE-EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 ++E EE D AIIF TK E+ L A G+ L GD+ Q+ R R++++ G Sbjct: 275 TRILEVEEDFDAAIIFVRTKTATVELADKLEARGYSAAALNGDMTQQLRERVIEQLKGGQ 334 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 LDI+VATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG +G +I Sbjct: 335 LDIVVATDVAARGLDVSRISHVINYDIPYDTEAYVHRIGRTGRAGRTGSAILFVAPREMR 394 Query: 367 NLPAIE 372 L IE Sbjct: 395 MLKVIE 400 >UniRef50_D1BLQ6 DEAD/DEAH box helicase domain protein n=3 Tax=Veillonella RepID=D1BLQ6_VEIPT Length = 432 Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 146/403 (36%), Positives = 226/403 (56%), Gaps = 19/403 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F + +++ AL+K+G TPIQ ++P+ G DV +AQTGTGKT+AFL Sbjct: 2 KSFKSLGVCDELIIALQKQGIKEPTPIQEQSIPVVFKGNDVIAKAQTGTGKTLAFLLPIL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + V+Q + LI+APTREL QI +A+ L + + GG + QL Sbjct: 62 QRVHTD-------VHQEQVLIIAPTRELIKQISDEAKELGSILNVDILPLIGGKTIEAQL 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L +++GT GRL+D+AK+ ++L I+ VVLDEAD+M +GF+ DI L + Sbjct: 115 QQLGRRPQVILGTPGRLLDHAKRGSLHLDCIRRVVLDEADQMLHMGFLPDIENLISQTD- 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 AN++L +LFSAT+ ++R LA M+ + E + T I + ++ + EEK + L Sbjct: 174 ANRQL-LLFSATIPDKIRNLAKAYMSKPISVTAEGKHITLESIDQRVYMMNPEEKTQRLI 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +IE++ P AI+F N + + L A G + + GD+ Q +R +IL +F + Sbjct: 233 KMIEDDNPFLAIVFCNKREGAIRLSYELTAAGLNIAEMHGDLTQGRRTQILRDFAKAKTQ 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARG+ I +THV+NYD+P D + Y+HRIGRTGRAG SG +++ A + L Sbjct: 293 ILVATDIAARGIDIEGITHVYNYDVPRDVDYYIHRIGRTGRAGNSGIAVTFATPQDEAWL 352 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRT 411 IE I ++ +KY D + T+ P+RT Sbjct: 353 RRIERAIQATL--TKYTKDGQIK--------TKGNASTAPKRT 385 >UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 Tax=Leptospira RepID=Q04VV9_LEPBJ Length = 513 Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 144/378 (38%), Positives = 214/378 (56%), Gaps = 16/378 (4%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KFS+ L ++ A+ + GF +PIQ+ A+P+ L G+D+ G AQTGTGKT AF Sbjct: 5 KFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAI---- 60 Query: 70 YLLSHPAIADRKVNQP--RALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDK 126 PAI +V +ALI+ PTREL +Q+ L + G ++ YGG ++ Sbjct: 61 -----PAIELLEVESKHLQALILCPTRELVIQVSEQFRKLMKYKGNFEVVPVYGGQEIER 115 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 QLK L I+I T GR++D+ ++ I L I++VVLDEAD M D+GF +D+ ++ + Sbjct: 116 QLKALRKNPQIVIATPGRMMDHMRRGSIRLNDIKIVVLDEADEMLDMGFREDMEFILKDT 175 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE-KMR 245 P R ++FSAT++ + L + + I+V ++ + +I E+++Y E K Sbjct: 176 PI--DRQTIMFSATMTEDILTLMKRFQKHPQIIDVTHQKLSAPKI-EQIYYEIQENAKGE 232 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L LIE A++F NTK + + + L + G+ L GD+ QK+R ++++ F G Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRNG 292 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 +++ILVATDVA RG+ + V VFNYDLP D EDYVHRIGRTGRAG G + S + Sbjct: 293 NIEILVATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQI 352 Query: 366 LNLPAIETYIGHSIPVSK 383 NL IE G I K Sbjct: 353 YNLKKIERINGIKIEAGK 370 >UniRef50_D2Q2K3 DEAD/DEAH box helicase domain protein n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q2K3_9ACTO Length = 554 Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 147/384 (38%), Positives = 212/384 (55%), Gaps = 7/384 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L ++V AL G H PIQA LP +LAG+DV G+ +TG+GKT AF+ Sbjct: 67 FADLGLPAELVTALAAAGVHKPFPIQAATLPDSLAGKDVLGRGRTGSGKTYAFVLPLIAR 126 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L + + R+ NQPRALI+APTRELA QI A PL +A GL+ +GG G+ Q+ Sbjct: 127 LAT--SGTRRRPNQPRALILAPTRELATQIQASISPLTDAFGLRTMTVFGGVGHGPQITG 184 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVDI++ GRL D+ K H L A+++ VLDEAD M DLGF+ +R L P Sbjct: 185 LRKGVDIVVACPGRLEDHVKAGHAKLDAVEITVLDEADHMADLGFLPAVRRLLEATPATG 244 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 QRL LFSATL V L M + V+ Q ++ + + + ++ +L L Sbjct: 245 QRL--LFSATLDAGVDVLVKRFMRSPVTHSVDSAQSPVAKMTHHVLHVQPDSRLPVLVDL 302 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 P R ++F TK+ + + L A G L G+++Q R R L+ F+ G L Sbjct: 303 --AAAPGRTLVFTRTKYGAKSLTKKLIAQGVPAVELHGNLSQGARTRNLEAFSDGSAKTL 360 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+H+ V+ V + D P + + Y+HR GRT RAGA G ++L ++ ++ Sbjct: 361 VATDIAARGIHVDDVSLVIHADPPIEHKAYLHRSGRTARAGAEGTVVTLMTDDQVRDVRD 420 Query: 371 IETYIGHSIPVSKYN-PDALMTDL 393 + G + V+K D L+T+L Sbjct: 421 LTRKAGIAPTVTKLRIGDPLLTEL 444 >UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIU5_9BACT Length = 537 Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 132/368 (35%), Positives = 212/368 (57%), Gaps = 10/368 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLA-GRDVAGQAQTGTGKTMAFLTSTF 68 KF+ L P + + LE KGF +PIQ A+P+ L+ D+ GQAQTGTGKT AF Sbjct: 3 KFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIV 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + P + +P+ALI+ PTRELA+Q++ + + + G+ YGG Q Sbjct: 63 QKI--EPGL-----KKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQK 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ GVD+++ T GR I + + + L +++ +VLDEAD M ++GF++D+ + + P Sbjct: 116 RALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASP- 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + R ++FSAT+ R++++A M+N+ I+ + E T I + ++ E K L Sbjct: 175 -DDRTVLMFSATMPPRLKKIAESYMHNSITIKAKSETMTMETIDQVVYEAYPENKFAALC 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ E IIF TK E++ LA +G+ + GDVAQ+ R R+L F ++ Sbjct: 234 RIMDLEKDFYGIIFCRTKVEVEKVSAGLANEGYAADYIHGDVAQESRERLLKRFRNRNIS 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +L+ATDVAARG+ + ++H+ N+ LP+ E YVHRIGRTGRAG +G +I+L + + Sbjct: 294 LLIATDVAARGIDVTDLSHIVNFSLPEQFESYVHRIGRTGRAGKTGTAITLITPKERSKM 353 Query: 369 PAIETYIG 376 IE G Sbjct: 354 SFIEKKTG 361 >UniRef50_Q5SM34 ATP-dependent RNA helicase n=4 Tax=Thermus RepID=Q5SM34_THET8 Length = 517 Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 141/333 (42%), Positives = 194/333 (58%), Gaps = 10/333 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F DF L P+++EAL +G TPIQA ALPL L G+D+ GQA+TGTGKT+AF Sbjct: 9 EFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAE 68 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L A + + +PRAL++ PTRELA+Q+ + E A A LK+ YGG GY KQ + Sbjct: 69 RL----APSQERGRKPRALVLTPTRELALQVAS--ELTAVAPHLKVVAVYGGTGYGKQKE 122 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G D ++ T GR +DY +Q ++L ++V VLDEAD M +GF +++ L PP+ Sbjct: 123 ALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPS 182 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q +LFSATL + LA M N I V ++ + +EE ++ +L Sbjct: 183 RQ--TLLFSATLPSWAKRLAERYMKNPVLINVIKDEPVTY--EEEAVPAPVRGRLEVLSD 238 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ PDRA++F TK EEI L GH L GD++Q +R R+L F +G++ + Sbjct: 239 LLYVASPDRAMVFTRTKAETEEIAQGLLRLGHLAQALHGDLSQGERERVLGAFRQGEVRV 298 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVH 342 LVATDVAARGL IP V V +Y LPD E Y H Sbjct: 299 LVATDVAARGLDIPQVDLVVHYRLPDRAEAYQH 331 >UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular organisms RepID=Q46G62_METBF Length = 579 Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 138/354 (38%), Positives = 204/354 (57%), Gaps = 14/354 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGR-DVAGQAQTGTGKTMAFLTSTF 68 KF L +++AL+KKGF TPIQ +PL L G D+ GQAQTGTGKT AF Sbjct: 6 KFKALGLSDSMLKALKKKGFEEPTPIQEKVIPLFLKGECDIIGQAQTGTGKTTAF----- 60 Query: 69 HYLLSHPAIAD--RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 P I K + +A+++ PTRELA+Q+ + L L + YGG + Sbjct: 61 ----GAPIIEKIPEKSGKVQAIVLTPTRELAIQVSEELNSLKGDKKLHIVPIYGGQSMTQ 116 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q ++L+SGVDI++GT GR+ID+ ++ +NL I VLDEAD M ++GFI DI+ + + Sbjct: 117 QFRMLKSGVDIVVGTPGRVIDHLERKSLNLENIAYFVLDEADEMLNMGFIDDIKEILKAT 176 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P ++R+ + FSAT+ + + + M N EY+ ++ E + ++ F +K Sbjct: 177 GP-DKRM-LFFSATMPKPILGIIKKHMKNYEYVAIKKEDLDVNLTEQIYFEVKESDKFEA 234 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L +I+ E ++F TK ++ L G+ L GD++Q++R +IL+ F + Sbjct: 235 LCRIIDIEDEFYGLVFCRTKTDTSQLAQKLGDRGYAADALHGDLSQREREKILNRFRKQK 294 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 ++ILVATDVAARG+ I +THV NY LP D E YVHRIGRTGRAG G +I+ Sbjct: 295 INILVATDVAARGIDIMDLTHVINYSLPQDPESYVHRIGRTGRAGKQGTAITFV 348 >UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=Pasteurellaceae RepID=DEAD_HAEIN Length = 613 Score = 240 bits (613), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 138/348 (39%), Positives = 197/348 (56%), Gaps = 10/348 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L +++A+ GF +PIQ +P L G DV G AQTG+GKT AF Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFA------ 60 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQLK 129 L A D P+ L+MAPTRELA+Q+ E + A G ++ YGG YD QL+ Sbjct: 61 -LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLR 119 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ G +++GT GR++D+ ++ +NL ++ +VLDEAD M +GFI D+ + +P Sbjct: 120 ALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPEN 179 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +Q LFSAT+ +R + MN+ + ++++ + I + +Y K L Sbjct: 180 HQ--TALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLR 237 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +E E D AIIFA TK +I L +G R L GD+ Q+ R + LD G LDI Sbjct: 238 FLEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDI 297 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 +VATDVAARG+ I ++ V NYD+P D E YVHRIGRTGRAG SG ++ Sbjct: 298 VVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRAL 345 >UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms RepID=C7JBN9_ACEP3 Length = 636 Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 142/370 (38%), Positives = 199/370 (53%), Gaps = 6/370 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L ++ A+ G+ + TPIQ A+P L RDV G AQTGTGKT +F Sbjct: 157 FADLELSEPILRAISDMGYTHPTPIQEQAIPAILMARDVMGVAQTGTGKTASFTLPMLEI 216 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L A + PR+LI+ PTRELA+Q+ + + L L GG+ Q +V Sbjct: 217 LSDSRA----RARMPRSLILEPTRELALQVAENFVNYGKYLKLNHALLIGGESMADQKEV 272 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+LI T GRL+D ++ + L ++V+DEADRM D+GFI DI + +PP Sbjct: 273 LNRGVDVLIATPGRLLDLFERGGLMLNHTGILVIDEADRMLDMGFIPDIEKIVGLLPPNR 332 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q L LFSAT++ +R+LA +++ + I V + I + K L+ L Sbjct: 333 QTL--LFSATMAPTIRKLADAFLHSPKEITVARQSSVATTITTGIVVVDEYSKRETLRQL 390 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 +++ AI+F N K + + L G L GD+ Q R L++F +L +L Sbjct: 391 LKDPALQNAIVFCNRKRDVDILTKSLVKHGFSAAALHGDLPQSVRFSTLEKFKNDELKVL 450 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 V +DVAARG+ I ++HVFN+DLP EDYVHRIGRTGRAG GH+ S+A A Sbjct: 451 VCSDVAARGIDIGGLSHVFNFDLPFHAEDYVHRIGRTGRAGREGHAYSIATPYDKALAEA 510 Query: 371 IETYIGHSIP 380 IE G IP Sbjct: 511 IEKLTGKEIP 520 >UniRef50_C8P164 ATP-dependent RNA helicase DbpA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P164_ERYRH Length = 487 Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 124/350 (35%), Positives = 206/350 (58%), Gaps = 9/350 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F ++ + ++++++ G+ T +Q +P L+G+++ Q+QTG+GKT +F H Sbjct: 5 FKNYGIDDSILKSIQYLGYEAPTDVQQEVIPAVLSGKNIVVQSQTGSGKTASFGIPICHQ 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + + K +P+ L++APTRELA+QI D L LK+ +G ++KQ + Sbjct: 65 V-------EWKKRKPQVLVLAPTRELAIQIQEDLFNLGRFKRLKVEALFGRSSFEKQAQR 117 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ IL+ T GRL+D+ + ++L I+ +V+DEAD M+++GFI I + R+P + Sbjct: 118 LKEMTHILVATPGRLLDHMARETVDLSHIETLVIDEADEMFNMGFIDQITSIINRIPKKS 177 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q+L LFSAT+ RV++L + N ++I++E E + RI E + +KM LL+++ Sbjct: 178 QKL--LFSATMPERVKDLCTLYIKNPQWIDIETESRVEDRIDERYYIVDYPDKMALLESV 235 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E PD +IIF NTK + E + + G +V L G + Q+ R ++L +F G L Sbjct: 236 LITENPDSSIIFCNTKEQVESVTNFMEDLGCKVDTLHGGMEQRFRTKVLADFKHGLFRYL 295 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 VATDVAARGL I V+ V N+D+P++ E Y HR+GRT R G +++ A Sbjct: 296 VATDVAARGLDIDDVSLVVNFDVPENTESYTHRVGRTARVDKYGKAVTFA 345 >UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAN9_9CLOT Length = 563 Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 130/351 (37%), Positives = 210/351 (59%), Gaps = 8/351 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+ L + +A+E GF N T IQA ++PL AG DV G++QTGTGKT+AF Sbjct: 6 FAQLNLSDETGQAIEAMGFDNATDIQAQSIPLIRAGYDVIGRSQTGTGKTVAFGVPAVEL 65 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQLK 129 + + + N+ + LI+ PTRELAVQ ++ E +A+ G++ YGG D+Q+ Sbjct: 66 IDT-----EELRNKTQVLILCPTRELAVQACSEIEKIAKYKRGVRAVDIYGGAPMDRQIM 120 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ G +I++GT GR++D+ ++ + L +++++LDEAD M ++GF +D+ + ++ P Sbjct: 121 RLKRGANIVVGTPGRVMDHLRRRTLKLDHLKMIILDEADEMLNMGFREDVETILKQTP-- 178 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 ++R +LFSAT+ + L + + + IE+ +Q T I+++ + KM L Sbjct: 179 DERQTILFSATMPPAILALTKQYQKDPQLIEINRKQVTLDNIEQQFYEVPMGRKMDALGI 238 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +++ P +IIF NTK +E+ L G+ L GD+ Q +R +++D F RG I Sbjct: 239 ILQYHDPALSIIFCNTKRMVDEVTAFLDRSGYSAEGLHGDMKQSQRTKVMDSFKRGRTKI 298 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 LVATDVAARG+ + V +V NYD+P + E YVHRIGRTGRAG G ++++ Sbjct: 299 LVATDVAARGIDVNNVDYVINYDVPQNQEYYVHRIGRTGRAGKEGKAVTIC 349 >UniRef50_B5ZLE2 DEAD/DEAH box helicase domain protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZLE2_GLUDA Length = 390 Score = 240 bits (612), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 144/373 (38%), Positives = 197/373 (52%), Gaps = 4/373 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L P++V + + G+ +PIQALA+P GRDV A+TGTGKT AF H Sbjct: 16 FDTLGLDPRIVANVARAGYATPSPIQALAIPPIRDGRDVEALARTGTGKTAAFALPVIHR 75 Query: 71 LLSHP--AIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LL+ A RALI++PTRELA Q GL + LA GG D+Q Sbjct: 76 LLTGAGGAAPSGPPGAVRALILSPTRELASQTAGTVRTCIRGCGLTVALAIGGAPKDRQA 135 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVDIL+ T GRL+D+ I L +VLDEADRM DLGF++D+R + R+P Sbjct: 136 RALLDGVDILVATPGRLLDHLADATITLDHTTCLVLDEADRMLDLGFVEDVRAIAARLPV 195 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +Q +LFSAT+S + L + ++ I + RI++++ + K L Sbjct: 196 RHQ--TLLFSATMSPAISALGRQLLHKPLQIAPPEQAAPPPRIRQQVIFTPAARKAASLL 253 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ E R ++F TK + + L G L GD Q +R R LD+F RG L Sbjct: 254 AVLRREAGGRTMVFTRTKQAADALARTLNTGGVTAAALHGDHGQVRRDRTLDDFRRGRLL 313 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDV ARG+ + V V N+D+P+ E Y+HRIGRT RAG G ++SL L L Sbjct: 314 VLVATDVMARGIDVEDVALVVNFDIPEQPETYIHRIGRTARAGRRGTALSLCDPAERLKL 373 Query: 369 PAIETYIGHSIPV 381 IE G I V Sbjct: 374 RDIERQSGARITV 386 >UniRef50_B5ZGC1 DEAD/DEAH box helicase domain protein n=3 Tax=Acetobacteraceae RepID=B5ZGC1_GLUDA Length = 427 Score = 240 bits (612), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 144/408 (35%), Positives = 218/408 (53%), Gaps = 6/408 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D +L P ++ AL ++G+ + TPIQA ++P+ L GRD+ G AQTGTGKT AF H Sbjct: 5 FADLSLAPTLLRALAEEGYASPTPIQAQSIPMLLEGRDLLGMAQTGTGKTAAFALPLLHR 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L P A + R L++APTREL QI E + +GG Q+ Sbjct: 65 LAMAPRPAPK--GGARVLVLAPTRELVSQIADGFESFGRHQPPSVTTIFGGVSQVHQVNA 122 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L++GVDI++ GRL+D Q +L ++ +VLDEAD+M D+GF + I + +P Sbjct: 123 LKAGVDIIVAAPGRLLDLIDQGLCDLSQLEALVLDEADQMLDMGFARPIERIVATLP--K 180 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R +LFSAT+ + LA + + +E+ P T RI++ + + +K L + Sbjct: 181 DRHTVLFSATMPKSIATLAESLLRDPAKVEIAPPSTTVDRIEQSVMFVDAADKKAALLAM 240 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + +A++F K+ E+ + G L G+ +Q +R R LD F G +L Sbjct: 241 LRTPGIGQAVVFTLQKNIANEVCAFITEAGITAEALHGNKSQGQRERALDAFRSGTAQVL 300 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ + VTHVFN+DLP E YVHRIGRTGRAG +G +I+L E L Sbjct: 301 VATDIAARGIDVDTVTHVFNHDLPSLPESYVHRIGRTGRAGRNGFAITLCDAEQRAWLRD 360 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 +E IG ++ V +P ++ + + P G P + P+ +R Sbjct: 361 VEREIGRALIVQDDHP--WHSEAARNSTMRPPVLGGAPAKEVKPQKKR 406 >UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWG8_9GAMM Length = 777 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 149/387 (38%), Positives = 208/387 (53%), Gaps = 19/387 (4%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 +E F+ L +++++ G+ TPIQA A+P L GRD+ AQTG+GKT AF+ Sbjct: 67 SENGFTALGLSGSLLKSIVATGYTTPTPIQARAIPAALEGRDLLLSAQTGSGKTAAFVLP 126 Query: 67 TFHYL---------LSHPAIADRKVNQPR---ALIMAPTRELAVQIHADAEPLAEATGLK 114 H L A R QP+ ALI+ PTRELA Q+ A Sbjct: 127 ILHQLSELQAKEKAAEKTASGKRGRQQPKVVQALILTPTRELANQVQDSIRKYGSAMKDL 186 Query: 115 LGLA-YGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDL 173 + GG Y Q++ L+ GV I++ T GRL+D+ +NL + ++VLDEADRM D+ Sbjct: 187 YSVPLVGGAAYSGQIRALKKGVQIIVATPGRLLDHINAQRVNLSDLTMLVLDEADRMLDM 246 Query: 174 GFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKE 233 GF DI + P R ++ SAT V ++A + E I ++ E T H I E Sbjct: 247 GFADDINAILEATPA--HRQTIMSSATWDGPVGKIAESFTKDPERINIKVE--TAH-IDE 301 Query: 234 ELFYPSN-EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQ 292 ++++ N + K +LL+ LI + +AIIF TK EE+ L H+ L GD+ Q Sbjct: 302 KVYFCDNFDHKNKLLEQLICDPERGQAIIFTATKRSSEEVAERLQQWDHKACYLHGDLPQ 361 Query: 293 KKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGA 352 KR RI+ + G DI+VATDVAARGL +P +THVFNYDLP EDYVHRIGR+GRAG Sbjct: 362 SKRNRIVSDLRSGKFDIVVATDVAARGLDLPNITHVFNYDLPRQVEDYVHRIGRSGRAGR 421 Query: 353 SGHSISLACEEYALNLPAIETYIGHSI 379 +G +I+L + I Y+ I Sbjct: 422 TGIAINLCSRDDRRQFGNIARYLKRDI 448 >UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RPH4_FIBSS Length = 486 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 147/394 (37%), Positives = 211/394 (53%), Gaps = 11/394 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF + L + A+ G+ TPIQ ++P L G+D+ G AQTGTGKT AF Sbjct: 2 KFEELPLANPLQRAVRAVGYETPTPIQERSIPSLLEGKDLLGIAQTGTGKTAAFALPILQ 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 LL R RALI+ PTRELA+Q+ A+ T + +GG + Q + Sbjct: 62 RLLDSGKF--RSPKTCRALILLPTRELAIQVEDCFREYAQFTAISTACIFGGVNDNPQKQ 119 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GVD+L+ T GRL+D Q I+L ++ VLDEADRM D+GFI DIR + +P Sbjct: 120 KLIRGVDVLVATPGRLLDLIGQKAISLKKLEFFVLDEADRMLDMGFIHDIRKVVAMLP-- 177 Query: 190 NQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R N+ FSAT+ + +LA + N +EV P+ RI++EL+ K LL+ Sbjct: 178 QDRQNLFFSATMPEEISKLAATILRPNPVRVEVAPQSTPIERIRQELYRIDKRRKGALLK 237 Query: 249 TLIEEEWPD--RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ E P+ + ++F TKH ++I L G + + G+ +Q +R L F Sbjct: 238 ELLAE-HPEMKKVLVFCRTKHGADKIVRVLEKAGIKCAAIHGNKSQNRRQEALGNFKCEQ 296 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + +LVATD+AARG+ + V+HVFNYDLP++ E +VHRIGRT RAG G +IS + Sbjct: 297 IRVLVATDIAARGIDVDDVSHVFNYDLPNEHETFVHRIGRTARAGKEGVAISFCSPDEES 356 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 +L IE IP ++ +LP P + T Sbjct: 357 DLRGIEKLTRVKIPEGD---QSIYENLPPPQKET 387 >UniRef50_A0LD66 DEAD/DEAH box helicase domain protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD66_MAGSM Length = 572 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 120/247 (48%), Positives = 169/247 (68%), Gaps = 3/247 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F++ + V+ + GF CTPIQAL LPL LAG+DVAGQAQTGTGKT AFL Sbjct: 2 EFTELPIPEPVLAGIRDCGFTQCTPIQALTLPLALAGKDVAGQAQTGTGKTAAFLIGALS 61 Query: 70 YLLSHPAIADRKVNQ--PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 +L++HP + Q PR L +APTREL QI +DA+ L T KL YGG Y+KQ Sbjct: 62 HLVTHPRKHGKPAGQSLPRILAVAPTRELVAQIESDAKLLNAHTQFKLHCVYGGVDYEKQ 121 Query: 128 LKVL-ESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 ++L E V+IL+GT GRLIDY KQN L ++V+++DEADRM+D+GFI D+R++ RR+ Sbjct: 122 KRILMEEDVEILVGTPGRLIDYFKQNAYGLKGVEVLIVDEADRMFDMGFIDDLRYMLRRL 181 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P ++RL+MLFSATLSYR +E+++E MN E + + KT R++++L++ S +EK+ L Sbjct: 182 PHYSERLSMLFSATLSYRAQEMSYEYMNMPEVLSTTVDVKTAERVEQKLYHVSGDEKIAL 241 Query: 247 LQTLIEE 253 L L+ + Sbjct: 242 LVGLLRD 248 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 73/138 (52%), Positives = 94/138 (68%), Gaps = 1/138 (0%) Query: 256 PDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDV 315 P R+++F NTK E + L A+G + G L+GDV Q KRL++L F G+ +L+ATDV Sbjct: 320 PGRSMVFVNTKRAGERVERWLKANGIQAGYLSGDVPQMKRLKVLKRFQDGEYPVLIATDV 379 Query: 316 AARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYI 375 A RGLHI VTHV NYDLPD+ EDYVHRIGRT RAG G +I+L EE A +L A++ YI Sbjct: 380 AGRGLHIDGVTHVINYDLPDNAEDYVHRIGRTARAGNRGDAIALVDEEGAYSLEAVQAYI 439 Query: 376 GHSIPVSKYNPDALMTDL 393 G +IP+ + D L DL Sbjct: 440 GMTIPIV-WAEDDLFADL 456 >UniRef50_Q98RE0 ATP-DEPENDENT RNA HELICASE n=1 Tax=Mycoplasma pulmonis RepID=Q98RE0_MYCPU Length = 480 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 131/351 (37%), Positives = 195/351 (55%), Gaps = 9/351 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F+ + +++++L++ GF T IQ LP G+D+ GQAQTGTGKT AF Sbjct: 2 RFTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILS 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L D +N+ + L++APTRELA QI+ L + T K+ L GG Y+KQ Sbjct: 62 NL-------DCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKA 114 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L SGV+I++ T GRL D QN I+L I+ LDEAD + +GF +I + ++P Sbjct: 115 ALNSGVNIVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPK- 173 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R N F+AT + ++L+ E N A+ I + +T +I + S EEK+ L Sbjct: 174 -KRQNFFFTATFDEKTKKLSQEITNEAKMISMSSGLETTEKIDQNFVVVSEEEKLITLVK 232 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++ + P ++IF TK R +E+ L G + GD+ QK R +L+ F ++I Sbjct: 233 FLDFKKPTASVIFGRTKRRVDELASALQELGFSAVGIQGDMVQKDRTSVLNRFKDQKVNI 292 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +VATDV ARG+ + V VFN+DLP++ E Y HRIGRTGR G +IS Sbjct: 293 IVATDVMARGIDVSHVDLVFNFDLPEEIEYYTHRIGRTGRGTRIGQAISFV 343 >UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=B8J1L5_DESDA Length = 595 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 140/353 (39%), Positives = 202/353 (57%), Gaps = 17/353 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L ++++A+E GF +PIQ LA+P LAG D GQAQTGTGKT AF Sbjct: 5 FEELGLSRELLKAVEDMGFEEPSPIQVLAVPCLLAGNDAFGQAQTGTGKTAAFGLPILDK 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLA----YGGDGYDK 126 L +ALI+ PTRELA+Q+ AE L + K G+A YGG ++ Sbjct: 65 LTPE--------RNTQALILCPTRELAIQV---AEELNKLAAHKRGVAILPIYGGQPIER 113 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 QL+ L GV +++GT GR++D+ K+ + L + VLDEAD M D+GF +DI + + Sbjct: 114 QLRALAKGVQVVVGTPGRVMDHLKRGTLRLSQASMAVLDEADEMLDMGFREDIEAILEQT 173 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P + QR+ LFSAT+ +REL+ + E + V + T I++ + +KM Sbjct: 174 PASCQRV--LFSATVPPAIRELSKRFLREPEMLTVAQKMLTVPAIEQIYYEVRPHQKMDA 231 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L L++ +A++F +TK +E+ HL G++ L G++AQ +R R++ F Sbjct: 232 LCRLLDSRAFHKALVFCSTKRGADEVTTHLQQRGYQSDSLHGNLAQSQRDRVMQRFRAEG 291 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 LD+LVATDVAARGL + V V NYD+P D E YVHRIGRTGRAG G + + Sbjct: 292 LDVLVATDVAARGLDVDDVDAVINYDIPHDVEKYVHRIGRTGRAGRVGSAFTF 344 >UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFI3_CARHZ Length = 430 Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 131/371 (35%), Positives = 212/371 (57%), Gaps = 10/371 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 ++F L +++A+ GF TPIQ A+PL L G ++ GQA TGTGKT A+L Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + ++ + + LI+ PTRELA+Q+ + L + ++ YGG ++Q+ Sbjct: 62 QRI--------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQI 113 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GV++++GT GR++D+ + I++V+LDEAD M D+GFI DI + + Sbjct: 114 RGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTL-- 171 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 N++ +LFSATL ++ + + + + +++ +KT I++ + EK+ L Sbjct: 172 TNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLV 231 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ E P +AI+F TK R +E+ L G+ L GD++Q++R + + F G + Sbjct: 232 SILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTE 291 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGL IP V+HV N+D+P + E Y+HRIGRTGRAG G +I+L L Sbjct: 292 LLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLL 351 Query: 369 PAIETYIGHSI 379 AIE I + Sbjct: 352 KAIEEAINKRL 362 >UniRef50_Q2YZZ9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q2YZZ9_9BACT Length = 453 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 139/370 (37%), Positives = 204/370 (55%), Gaps = 8/370 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS LHP +++AL++ GF TPIQA A+P ++GRDV A TG+GKT AFL H Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+ DR RAL++ PTRELA QI D LA T + +GG Q Sbjct: 63 LI------DRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHA 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 GVD+LIGT GRL+D+ + + L ++ +VLDEADRM D+GF+ DIR + + +P Sbjct: 117 FRRGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIP--A 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R + FSAT+ + LA E + N + + I + ++ + E K LL L Sbjct: 175 RRQTLFFSATMPAPIGVLAREMLRNPATVNINRIAAPAAGITQAVYPVAQELKAALLVAL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ + A++F TKHR + HL G + + G+ +Q +R L F G +L Sbjct: 235 LKRDDIRDALVFTRTKHRANRLAEHLVRQGIKAERIHGNRSQGRRTEALAGFKAGKYRVL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ + + HV N+D+P +DY+HR+GRT RA A+G + + + +L Sbjct: 295 VATDIAARGIDVTELGHVVNFDVPLVPDDYIHRVGRTARAEATGDAFTFVSPQEQGDLTR 354 Query: 371 IETYIGHSIP 380 IE IG +P Sbjct: 355 IERVIGKQLP 364 >UniRef50_UPI0001C36A36 DEAD/DEAH box helicase domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36A36 Length = 483 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 134/372 (36%), Positives = 210/372 (56%), Gaps = 9/372 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F +AL P+++ AL+ G+ T IQ +P L GR+VA +++TGTGKT AF Sbjct: 10 FLPYALAPEIIHALDLLGYQEPTEIQREVIPAVLEGRNVAARSRTGTGKTAAFGIPLCEK 69 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 ++ N P+AL++ P+RELAVQ+ + + LK+ +GG DKQ++ Sbjct: 70 IVWEE-------NLPQALVLEPSRELAVQVSNELFHIGRRKRLKVPAVFGGFPIDKQMRT 122 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 ++ I++GT GR++D ++ + L I+ +V+DEAD M D+GF+++++ + +P Sbjct: 123 IKQKSHIVVGTPGRVMDLIQRECLKLAGIRYLVIDEADLMLDMGFLEEVKQIMALLPKGG 182 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 + L LFSATL +VR L E M +A I EP+ + I + ++ EEK LL+ Sbjct: 183 RVL--LFSATLDEKVRLLVDEYMADAVMIAPEPDAEEEPAISQVVYRADPEEKYDLLKRT 240 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E P+ +IF T+ + L D G++ G++ Q++RL+ +D F RG L Sbjct: 241 LILENPESCMIFCGTREMVNVLLQKLKRDRIFCGMIHGEMEQRERLKTVDAFRRGGFRFL 300 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 +ATDVAARG+ + V NYD P E YVHRIGRTGR G +G ++SL CE L Sbjct: 301 IATDVAARGIDFDKIDLVVNYDFPGGRETYVHRIGRTGRNGENGRAVSLLCESEERMLHM 360 Query: 371 IETYIGHSIPVS 382 +E Y+G + V+ Sbjct: 361 VEAYMGRELSVT 372 >UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (DeaD) n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SU57_LEPBP Length = 534 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 132/353 (37%), Positives = 205/353 (58%), Gaps = 14/353 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F L P++++ + + GF + +PIQ A+PL L G+D+ QAQTGTGKT A+ Sbjct: 17 FQSFGLRPEILQGITEAGFESPSPIQKQAIPLVLEGKDLIAQAQTGTGKTAAY------- 69 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 P + KV + L++ PTRELA+Q+ + L + G+K YGG Y KQ+ Sbjct: 70 --GLPCLNRIKVEDGMQVLVLTPTRELALQVSDELFKLGKHLGIKTTTIYGGSSYSKQIT 127 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 + G + + T GRL+D K + +V+LDEAD M D+GF+ DI +F +P Sbjct: 128 QVAKGAQVAVATPGRLLDLLKGKELKNFKPSMVILDEADEMLDMGFMDDIESIFNLLP-- 185 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLLQ 248 +R +LFSAT+ +++LA + + ++++ +K+ I E+++Y +E E+ + Sbjct: 186 TKRQTLLFSATMPEPIKKLASKYQTHPAHVKIAATEKSSKNI-EQVYYIIDEAEREIAVV 244 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ E P +AIIF TK +++ L+ G+ V L GD+ QK+R ++L G + Sbjct: 245 RILDYENPFKAIIFTKTKKEADDLKSTLSFKGYPVEALHGDLNQKQREQVLKSLHDGRVK 304 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 ILVATDVAARGL + ++ V NY LP D E Y HRIGRTGRAG SG +++L Sbjct: 305 ILVATDVAARGLDVKDLSLVINYHLPFDSESYTHRIGRTGRAGKSGKAVTLVT 357 >UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA Length = 801 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 132/361 (36%), Positives = 204/361 (56%), Gaps = 8/361 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL---- 64 + F + ++ + L K F TP+Q ++P+ ++GRD+ AQTG+GKT AFL Sbjct: 352 KSFEEAGIYDGFMTNLVKAHFEKPTPVQKYSIPIVMSGRDLMACAQTGSGKTAAFLLPVL 411 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 T L+ A +D V +P+AL++APTRELA+QI DA + T L+ + YGG Sbjct: 412 TGMMKNGLTGSAFSD--VQEPQALVVAPTRELALQIFNDARKFSHGTMLRPVVLYGGTSV 469 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 QLK +E+G I++GT GRLID + I+L ++ ++LDEADRM D+GF DI+ + Sbjct: 470 GYQLKQVENGAHIVVGTPGRLIDVINKGKISLAKLKYLILDEADRMLDMGFGPDIKKIVH 529 Query: 185 RM--PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 + P +R ++FSAT +++LA + +N+ ++ V + + F ++ Sbjct: 530 ELGTPEKTERQTLMFSATFPEEIQKLAGDFLNDYLFLTVGRVGGACSDVTQHFFQVDRQQ 589 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K + L ++ E D+ ++F K + + +L+ G + GD Q++R L +F Sbjct: 590 KRQKLCDILSESGADKTLVFVEQKRNADFLASYLSESGFPTTSIHGDRLQREREEALRDF 649 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 +G IL+AT VAARGL IP V HV NYDLP ++YVHRIGRTGR G G + S E Sbjct: 650 KQGKAPILIATSVAARGLDIPNVKHVINYDLPQSIDEYVHRIGRTGRCGNLGKATSFFSE 709 Query: 363 E 363 + Sbjct: 710 D 710 >UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKI7_9FIRM Length = 580 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 132/375 (35%), Positives = 212/375 (56%), Gaps = 17/375 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F+DF L +V++A+ + GF +PIQ A+P L D+ GQAQTGTGKT +F Sbjct: 3 ENFNDFNLSKEVLKAVVEMGFEEPSPIQKQAIPTMLNNEDIIGQAQTGTGKTASF----- 57 Query: 69 HYLLSHPAIADRKVNQ----PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 P + KVN+ +A+++ PTREL++Q+ + LA+ G+ + YGG Sbjct: 58 ----GIPIV--EKVNKNSKTTQAMVLCPTRELSIQVAEEISKLAKYKGVTVVPIYGGQPI 111 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 ++Q++ L+ GV +++GT GR+ID+ K+ + I+ VLDEAD M+D+GF +DI + Sbjct: 112 ERQIRSLKMGVQVIVGTPGRVIDHIKRKTLKTENIKTFVLDEADEMFDMGFREDIEKIIG 171 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P +R FSAT+ + + + A + I+V P++ T ++ + F + K+ Sbjct: 172 FLPY--ERQTTFFSATMDHEMMDFAARYQSEPRLIKVVPKELTVPKVTQYYFALKHNMKL 229 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 +L +++ + P ++F NTK +++ L + G+ L GD+ Q +R ++++F Sbjct: 230 EILSRILDVQNPKLTVVFCNTKKMVDDLTAGLQSRGYFADGLHGDLKQIQRDGVMNKFRN 289 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 +DILVATDVAARG+ + V V NYD+P D E YVHRIGRT RAG G +IS Sbjct: 290 STIDILVATDVAARGIDVDDVDLVINYDMPQDVEYYVHRIGRTARAGREGTAISFVSPRE 349 Query: 365 ALNLPAIETYIGHSI 379 L I+ Y I Sbjct: 350 MNTLSQIQKYTKTKI 364 >UniRef50_A5FST0 DEAD/DEAH box helicase domain protein n=5 Tax=Dehalococcoides RepID=A5FST0_DEHSB Length = 561 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 132/349 (37%), Positives = 196/349 (56%), Gaps = 9/349 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F P V+ + G+ TPIQA A+P +AG DV G AQTGTGKT A+ Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQK 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +LS P + R L++APTRELA QI L + ++ YGG D+Q++ Sbjct: 63 MLSTPR------GRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRR 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L SGVD+++ GRL+D+ + I++ ++ +++DEADRM+D+GF DI+ + + + + Sbjct: 117 LRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPH 176 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q L LFSAT+ VR+L E N ++V + S+++ LL+ L Sbjct: 177 QTL--LFSATMPPEVRKLTLETQTNPVTVQVGTQSPVSSVSHSVYPVKSHQKTPLLLEIL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 E +IFA TK+ E + ++ G L G+++Q +R +++ F RG+ IL Sbjct: 235 KTVET-KSVLIFARTKYGAENLADEISKAGFTTASLQGNLSQNRRHAVMEGFRRGNFKIL 293 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 VATD+AARGL I ++HV NYD+PD EDY HRIGRTGR +G + SL Sbjct: 294 VATDIAARGLDIDHISHVINYDMPDSPEDYTHRIGRTGRFDRTGQAFSL 342 >UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFK0_ACHLI Length = 448 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 142/371 (38%), Positives = 209/371 (56%), Gaps = 6/371 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KFS+ + ++ +AL G+ T IQ A+P+ L+G+D+ G AQTGTGKT AF Sbjct: 2 KFSELNIIERIQKALTLSGYEAPTAIQEQAIPILLSGQDLLGSAQTGTGKTAAFAIPILQ 61 Query: 70 YLL-SHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + A RKV +ALI+ PTRELA+QIH + + A+ + YGG +Q Sbjct: 62 KIYETKEHKAPRKV---QALILTPTRELALQIHENVKIYAKYLNIISTTIYGGVSQKRQE 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ GVD++I T GRL+D Q I+L ++ +VLDEAD+M D+GFIKD+ + + P Sbjct: 119 EALKRGVDVVIATPGRLLDLMNQKIISLQDVRYLVLDEADQMLDMGFIKDVTSIVDKTP- 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R MLFSAT+ ++ L+ + + N E I V P +T I + ++ + K LL Sbjct: 178 -KKRQTMLFSATMPKQIEVLSKQILVNPERIAVTPVTQTLDAITQSVYMVNKANKTLLLI 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI ++F TKH ++ +L G + G +Q R R L F +G Sbjct: 237 DLIYTLNMKSVLVFTKTKHGANKLVKNLMNLGIESEPIHGSKSQAARERALANFKKGKTK 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARG+ I A+ +V N++LP+ E Y+HRIGRTGRAG SG ++SL L Sbjct: 297 ILVATDIAARGIDIEALDYVINFELPEVPETYIHRIGRTGRAGLSGMALSLVDPSEQKLL 356 Query: 369 PAIETYIGHSI 379 +E +I I Sbjct: 357 TQVEKHINSKI 367 >UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 Length = 478 Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 138/372 (37%), Positives = 200/372 (53%), Gaps = 5/372 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F+D L ++ A+E +G+ TPIQ A+P L G D+ G AQTGTGKT AF Sbjct: 2 QFADLKLIEPLLRAIEAEGYSAPTPIQQQAIPPILEGNDLLGCAQTGTGKTAAFALPILQ 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + R L++ PTRELA Q+ + GL+ + +GG G Q++ Sbjct: 62 RLAQS---GGPRQGGLRVLVLTPTRELAAQVAESFTTYGKNLGLRTAVVFGGVGQRPQME 118 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GVD+L+ T GRL+D Q G + +VLDEADRM D+GFI DIR + +P Sbjct: 119 ALRRGVDVLVATPGRLLDLCSQGIAPFGRLDTLVLDEADRMLDMGFIHDIRRVLAMLP-- 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSAT+ + +LA + + +EV T I + + + +K +L+ Sbjct: 177 ERRQTLLFSATMPPDILKLANSILRSPVRVEVARIATTAENIDQRVVFVERSDKRAMLEH 236 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++++ RAI+F TKH + L+ + G+ +Q R R L F +G + Sbjct: 237 VLKDPALRRAIVFTRTKHGANRVVQQLSRARIEAVAIHGNKSQGARERALASFKQGTTSV 296 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATD+AARG+ I ++HV NYDLP+ E YVHRIGRT RAGASG ++S E L Sbjct: 297 LVATDIAARGIDIDDISHVINYDLPNIPESYVHRIGRTARAGASGVALSFCDSEERAYLA 356 Query: 370 AIETYIGHSIPV 381 IE I +P+ Sbjct: 357 DIERLIQKRLPL 368 >UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A n=3 Tax=Alteromonadales RepID=Q3IJ60_PSEHT Length = 616 Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 129/348 (37%), Positives = 199/348 (57%), Gaps = 11/348 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L P +++A+E+ G+ + IQA +PL L +DV G AQTGTGKT AF + Sbjct: 7 FESLNLSPAILKAVEELGYKTPSEIQAQCIPLLLERKDVLGLAQTGTGKTAAFALPLLNN 66 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQLK 129 + D V QP+ L++ PTRELA+Q+ E A+ G+++ YGG Y QL Sbjct: 67 I-------DPSVKQPQILVLTPTRELAIQVAEAFEQYAKHVRGIEVLALYGGQSYSIQLS 119 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G +++ T GRLID+ + I A+Q +VLDEAD M +GFI D+ + + P Sbjct: 120 ALRRGAQVIVATPGRLIDHINRGTIKFDALQALVLDEADEMLRMGFIDDVESIMEKTPRE 179 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 Q LFSAT+ +++ ++ + MNN E + + T + E++F+ ++ K + + Sbjct: 180 KQ--TCLFSATMPKQIQNISSKYMNNPEQVHISARNSTVSSV-EQVFWNASIHKNKAIVR 236 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +E E + AI+F T++ ++ L +G L GD+ Q+ R R ++ G L++ Sbjct: 237 FLEAEQYEGAIVFVRTRNDTVQLAELLEREGFSAAPLNGDMNQQARERTVERLKSGMLNV 296 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 ++ATDVAARGL + ++ V NYD+P D E YVHRIGRTGRAG +G +I Sbjct: 297 VIATDVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKAI 344 >UniRef50_C7H231 ATP-dependent RNA helicase DeaD n=4 Tax=Ruminococcaceae RepID=C7H231_9FIRM Length = 395 Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 144/350 (41%), Positives = 201/350 (57%), Gaps = 16/350 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 +S+ + +A+E+ GF T IQ +P+ LAGRDV +A TGTGKT AF + Sbjct: 3 YSELQCSEAIHKAVERMGFAEMTEIQEKTIPVMLAGRDVIAKAPTGTGKTCAFGIPVAEH 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT----GLKLGLAYGGDGYDK 126 + D + P+A+IMAPTRELA QI AE L E T +++ YGG +K Sbjct: 63 I-------DPEKKYPQAVIMAPTRELAQQI---AEELTELTYFMPEVQVACVYGGANMEK 112 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q + L G I++ T GRL+D+ K + I+L + VVLDEAD M ++GF KD+R + M Sbjct: 113 QARRLAEGCQIVVATPGRLMDHYKHHSIDLAHVTQVVLDEADEMLNMGFYKDVRHIIELM 172 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 A + L+M FSAT+S V ++ + NNAE I V+P +++ +I + + S K+ Sbjct: 173 K-ARKSLSM-FSATISREVMDIGWLYQNNAEEITVQPREESQPKITQYMLETSGRNKLSD 230 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L +I E R ++F +TK + LA G V L GD++QK+R +I+ F G Sbjct: 231 LAQIIIGEGYKRVMVFCDTKFNTATLANQLARLGFSVDCLHGDLSQKERNQIMQNFRDGR 290 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 L ILVATDVAARG+ + V V NYD+P D E Y HRIGRTGRA G S Sbjct: 291 LAILVATDVAARGIDVSDVDAVINYDVPGDNEHYTHRIGRTGRAKKEGVS 340 >UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7U5_CHRVI Length = 662 Score = 237 bits (605), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 141/381 (37%), Positives = 212/381 (55%), Gaps = 10/381 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M T F L P + +A++ G+ + T IQ+ +P LAGRD+ GQAQTGTGKT Sbjct: 1 MDTPDETSVGFDALGLSPVIAQAVKNLGYESPTAIQSQCIPHLLAGRDLLGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAY 119 AF L D + +P+ L++ PTRELA+Q+ + A + G + Y Sbjct: 61 AAFALPMLSRL-------DPDLRKPQVLVLTPTRELALQVAEAFQRYATDLKGFNVLPIY 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG GY QL L+ +++GT GR++D+ ++ + L +I+ +VLDEAD M ++GF +DI Sbjct: 114 GGQGYGLQLSQLKRNPQVIVGTPGRVMDHIRRGTLALDSIRALVLDEADEMLNMGFAEDI 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 W+F + P +R LFSAT+ +R +A ++ + +++ +T I++ + Sbjct: 174 DWIFDQAP--AERQVALFSATMPPAIRRVAQTRLVDPVEVKIAANSETVDTIEQHHCIVT 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ +L ++E E D +IF TK+ E+ L A G L GD+ Q+ R R + Sbjct: 232 RFHKLDVLTRIMELEPFDGLLIFVRTKNATTELADKLKAHGFAAEPLNGDMNQEMRERTV 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + +G LD+LVATDVAARGL + ++HV NYD+P D YVHRIGRTGRAG +G +I L Sbjct: 292 ERLKQGQLDVLVATDVAARGLDVERISHVVNYDIPTDPSAYVHRIGRTGRAGRAGRAILL 351 Query: 360 ACEEYALNLPAIETYIGHSIP 380 L +IE I IP Sbjct: 352 VEPRERGLLKSIERVIRRPIP 372 >UniRef50_C6XHW2 ATP dependent RNA helicase protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHW2_LIBAP Length = 465 Score = 237 bits (605), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 138/372 (37%), Positives = 203/372 (54%), Gaps = 9/372 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L PKVV A+ G+ TPIQ +PL L DV G AQTGTGKT +F+ Sbjct: 3 FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTI 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L A +V PR LI+ PTRELA Q+ + E + L + L GG ++ Q K Sbjct: 63 LEKGRA----RVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKK 118 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 LE G D+LI T GR++D+ + + + I+++V+DEADRM D+GFI I+ + +P Sbjct: 119 LERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTR 178 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 Q L LFSAT++ +++++ + N + IEV T I+ + + Sbjct: 179 QTL--LFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQ 236 Query: 251 IEEEWPD---RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + D IIF N K + L G V + G++ Q+ R++IL F G + Sbjct: 237 QLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTI 296 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ++VA+D+AARGL IP V HVFN+D+P+ E+Y+HRIGRTGRAG G + +L +E + Sbjct: 297 QLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKH 356 Query: 368 LPAIETYIGHSI 379 + AIE I + Sbjct: 357 IDAIEKLIEKKV 368 >UniRef50_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N178_SLAHD Length = 657 Score = 237 bits (605), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 142/374 (37%), Positives = 203/374 (54%), Gaps = 7/374 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L + A+ G+ TPIQ A+P+ L GRD+ A+TGTGKT AF T Sbjct: 9 FDESGLSATALAAVYDLGYEEPTPIQQQAIPVVLEGRDLIAAAKTGTGKTAAFALPTMDK 68 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L P K P +I+ PTRELA+QI E +A+ T ++ GG Y Q+K Sbjct: 69 L---PYAG--KGEGPVMVIVTPTRELAMQISEVCETIAKRTNHRVVTLLGGVSYTPQIKK 123 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L SG DI+I T GRL+D +Q+ +L +QV+VLDEADRM D+GF + + P + Sbjct: 124 LRSGCDIIIATPGRLLDLMRQHEADLDLVQVLVLDEADRMLDMGFWPQVSEIVDATP--S 181 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +LFSAT+ ++ F +N+ E IE+ T + + + + EK LL Sbjct: 182 ERQTLLFSATIDRSQDKVMFSLLNHPEIIEISHRGDTADLVDQYIIWTGRREKPALLNAF 241 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I E+ R I+F TK + L G + D +Q +R R L+ F G ++ Sbjct: 242 IREKGGFRVIVFTKTKGGADNCTRRLCKIGIGAEAIHADRSQAQRQRALERFREGKTHVI 301 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDV ARG+ +P V +V NYDLP EDYVHRIGRTGRAG +G+++S + L + Sbjct: 302 VATDVLARGIDVPEVDYVVNYDLPMMPEDYVHRIGRTGRAGVAGYAVSFVTPDTKNLLRS 361 Query: 371 IETYIGHSIPVSKY 384 I+ +IG I V ++ Sbjct: 362 IQKFIGEDIQVMEF 375 >UniRef50_C5C5R9 DEAD/DEAH box helicase domain protein n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C5R9_BEUC1 Length = 589 Score = 237 bits (605), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 138/374 (36%), Positives = 207/374 (55%), Gaps = 10/374 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 +E F D L +++A+ GF TPIQ A+P L+GRD+ G AQTGTGKT AF Sbjct: 18 SEPSFDDLGLPQALLDAVTGLGFTTPTPIQTAAIPALLSGRDLVGVAQTGTGKTAAFGLP 77 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIH-ADAEPLAEATGLKLGLAYGGDGYD 125 A D ++ +AL++ PTRELA+Q+ A A + G+K+ YGG + Sbjct: 78 LL-------AAVDPQLAAVQALVLTPTRELAIQVSDAVASFVPSGAGVKVLPIYGGASFV 130 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 QL+ LE G +++GT GR+ID ++ ++L A++ +VLDEAD M +GF +D+ + + Sbjct: 131 PQLRGLERGAQVVVGTPGRVIDLLERGSLDLDALRYLVLDEADEMLRMGFAEDVDVILAK 190 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P Q LFSAT+ +R++A + N E I V + + + K Sbjct: 191 TPATKQ--VALFSATMPPPIRKVAETHLRNPEEIAVARQATPIAAVTQTYAIVPYRNKAE 248 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L ++ D AI+F T+ EE+ LA+ G ++GDVAQ++R RI++ G Sbjct: 249 ALSRVLATSDADAAIVFVRTRETAEEVGTALASRGINAASISGDVAQRERERIVERLRSG 308 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 LD+LVATDVAARGL + + V N+D+P + E YVHRIGRTGRAG +G++++ + Sbjct: 309 ALDVLVATDVAARGLDVERIGLVVNFDVPREVETYVHRIGRTGRAGRTGNALTFLTPKEK 368 Query: 366 LNLPAIETYIGHSI 379 L IE G + Sbjct: 369 PRLRTIERVTGSRL 382 >UniRef50_D1N203 DEAD/DEAH box helicase domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N203_9BACT Length = 627 Score = 237 bits (604), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 132/352 (37%), Positives = 203/352 (57%), Gaps = 10/352 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGR-DVAGQAQTGTGKTMAFLTSTFH 69 F + +V+EAL KGF +PIQAL +P L G D+ GQAQTGTGKT AF Sbjct: 7 FRKLGVSEEVLEALRAKGFEAPSPIQALTIPKLLEGAVDLIGQAQTGTGKTAAFGIPVIE 66 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + + +P+ALI++PTREL++QI + L L++ YGG + QL+ Sbjct: 67 -------LCEGGGKKPQALILSPTRELSIQIAEELNSLKGKRKLRIAPFYGGQMIEIQLQ 119 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G+D++IGT GR++D ++ ++ ++ VLDEAD M D+GF++DI + + Sbjct: 120 RLRDGIDVVIGTPGRIMDLMERGKLDFSELKFAVLDEADEMLDMGFVEDIEKILG-ATNS 178 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 ++R+ ++FSAT+ + ++A M + E + E Q ++ F E+K L Sbjct: 179 DKRM-LMFSATMPPEILKIAERFMRSYETVRAESAQLNTELTEQIYFEVRREDKFEALSR 237 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +I+ E A++F T++ +E+ L GHRV L GD+AQ +R R++++F I Sbjct: 238 IIDVEQDLYALVFCRTRNDVDELVEKLKLRGHRVEALHGDIAQMQRTRVINQFKDKKFKI 297 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 L+ATDVAARG+ + +THV NY +P E YVHRIGRTGRAG +G +I+ Sbjct: 298 LIATDVAARGIDVNDLTHVINYSMPQGTETYVHRIGRTGRAGKNGTAITFVT 349 >UniRef50_D1B384 DEAD/DEAH box helicase domain protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B384_SULD5 Length = 436 Score = 237 bits (604), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 131/374 (35%), Positives = 199/374 (53%), Gaps = 3/374 (0%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L + +A+ + G+ TP+Q +PL L G+DV AQTGTGKT A+ H Sbjct: 3 FEKLGLSEPIRDAVRELGYTKPTPVQNKVIPLVLEGKDVMATAQTGTGKTAAYALPLLH- 61 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +L+ RALI+ PTRELA Q+ A + + L YGG + Q K Sbjct: 62 ILNKKTQKSTTSKVVRALILVPTRELASQVGASVQAYGKNVPLSSAAIYGGVKFTPQAKK 121 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ G+DILI T GRL+++ K +++L +++VV DEADR+ D+GF +++ L P Sbjct: 122 LDKGIDILIATPGRLLEHVKLGNVDLSRVEIVVFDEADRILDMGFWDEVQTLLGLFP--K 179 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +LFS LS V+ L+ + + + + ++++ L+ E K LL + Sbjct: 180 KRQTLLFSVGLSKSVKRLSEVSLKKPVTVAINNQGDFAKKVEQTLYLVDKERKCELLSFM 239 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I + ++F TK +E+ +L A G + +L GD A KR + + F + +L Sbjct: 240 IGTHNWHQVLVFTKTKQSADEVGEYLNASGLKTLVLHGDKAHSKRTQAIHAFKENAIRVL 299 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+A+RGL I + +V NY+LP D EDY HR GRTGRAG G +ISL +E Sbjct: 300 VATDIASRGLDIEDLPYVINYELPGDAEDYTHRAGRTGRAGKEGRAISLVAQEEKNKFKE 359 Query: 371 IETYIGHSIPVSKY 384 IE + ++I Y Sbjct: 360 IEKILKYTIKTEFY 373 >UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87E35 Length = 427 Score = 237 bits (604), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 132/374 (35%), Positives = 209/374 (55%), Gaps = 9/374 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F L +++A+++ G+ TPIQ ++P + + V AQTGTGKT AF+ Sbjct: 3 FQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILDK 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L + + + PR LI++PTRELA QI + + + GG Y Q ++ Sbjct: 63 LTKNRS----EGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNRM 118 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 +DIL+ T GRL+D +Q IN ++V++LDEADRM D+GF+ DIR ++ Sbjct: 119 FSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKKQ 178 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHR-IKEELFYPSNEE-KMRLLQ 248 Q L +FSAT ++++A E + N I ++P+ +GH+ IK+ +++ N+ K ++L Sbjct: 179 QML--MFSATFDPPIQKIAQEFLTNPVTISIKPDV-SGHKNIKQLIYFADNQSHKQQMLD 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 I+ + +AIIF TK +++ L + L GD++Q R + ++ F R + Sbjct: 236 HFIKNDEVTQAIIFTATKRMADQLSDQLYHSDIKTSALHGDMSQGSRTKTINRFKRNETK 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+A+RG+ + ++HVFNYD+P EDY+HRIGRTGRA G +ISL L Sbjct: 296 ILVATDLASRGIDVKNISHVFNYDMPRFAEDYIHRIGRTGRANNKGIAISLVSPTDREFL 355 Query: 369 PAIETYIGHSIPVS 382 IE + I ++ Sbjct: 356 RKIERFTNLKIEIA 369 >UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3 Tax=Desulfovibrio vulgaris RepID=Q725W5_DESVH Length = 532 Score = 236 bits (603), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 142/372 (38%), Positives = 204/372 (54%), Gaps = 10/372 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F D L ++++A+E+ GF +PIQ++A+P L GRDV GQAQTGTGKT AF Sbjct: 5 ESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLP-- 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQ 127 LL ADR V AL++ PTRELA+Q+ LA+ G+++ YGG + Q Sbjct: 63 --LLQRIDAADRSVQ---ALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQ 117 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L G +++GT GR++D+ + + LG +++ VLDEAD M D+GF +DI + MP Sbjct: 118 ASALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMP 177 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 Q + FSAT+ + ELA + E + V Q T ++ F ++ + Sbjct: 178 EWVQ--SAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVRPFRRVDAV 235 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + + P +AI+F TK +E+ L G L GD+ Q +R R++ F G + Sbjct: 236 CRIFDAYIPRKAIVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAGGI 295 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVAARGL + V V N+DLP+D E YVHRIGRTGRAG +G + S A Sbjct: 296 SVLVATDVAARGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAGRDVYK 355 Query: 368 LPAIETYIGHSI 379 L I+ G I Sbjct: 356 LRDIQRVTGSRI 367 >UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria RepID=DEAD_ECOL6 Length = 629 Score = 236 bits (603), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 143/377 (37%), Positives = 205/377 (54%), Gaps = 16/377 (4%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 E F+D L ++EAL G+ +PIQA +P L GRDV G AQTG+GKT AF Sbjct: 5 ETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPL 64 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT----GLKLGLAYGGDG 123 L D ++ P+ L++APTRELAVQ+ AE + + + G+ + YGG Sbjct: 65 LQNL-------DPELKAPQILVLAPTRELAVQV---AEAMTDFSKHMRGVNVVALYGGQR 114 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 YD QL+ L G I++GT GRL+D+ K+ ++L + +VLDEAD M +GFI+D+ + Sbjct: 115 YDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIM 174 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 ++P +Q LFSAT+ +R + M + + ++ T I + + K Sbjct: 175 AQIPEGHQ--TALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRK 232 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 L +E E D AIIF TK+ E+ L +G+ L GD+ Q R + L+ Sbjct: 233 NEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLK 292 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G LDIL+ATDVAARGL + ++ V NYD+P D E YVHRIGRTGRAG +G ++ Sbjct: 293 DGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENR 352 Query: 364 YALNLPAIETYIGHSIP 380 L IE + +IP Sbjct: 353 ERRLLRNIERTMKLTIP 369 >UniRef50_B1V958 DEAD/DEAH box helicase-like n=4 Tax=Candidatus Phytoplasma RepID=B1V958_PHYAS Length = 564 Score = 236 bits (603), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 130/370 (35%), Positives = 212/370 (57%), Gaps = 10/370 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + + +AL++ F TPIQAL +P + G DV GQAQTGTGKT AF Sbjct: 5 FEQLPILEQTKKALQELNFIEATPIQALVIPEIIQGHDVIGQAQTGTGKTFAFGIPIIEK 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLK 129 + D K+++ ++LI+ PTREL +Q++ + + L +++ + +GG+ Y KQ + Sbjct: 65 I-------DYKLSKTQSLILCPTRELTLQVYEELKKLLRYYPQIRIAVVFGGESYTKQFR 117 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LES ++I T GR+ID+ ++ I+L A++++ LDEAD M +GF + + + +++P Sbjct: 118 ALESKPHLIIATPGRVIDHIERGKIDLSALKILTLDEADEMLKMGFQEALETILKQIP-- 175 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSATL ++++A + N + ++V ++ + I++ F +K +LL Sbjct: 176 EERQTVLFSATLPPSIKQIASKYQKNTKILQVPVKKLAVNAIEQYYFLVKEFDKNKLLVR 235 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L++ + I+FANTK +EI L G + GD+ Q +R +++ F +G + I Sbjct: 236 LLDLKRDYSTILFANTKKDVDEITSFLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKI 295 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVAARG+ I + V NYDLP + E YVHRIGRTGRAG G + S L Sbjct: 296 LIATDVAARGIDISDIKMVVNYDLPHEDEVYVHRIGRTGRAGKKGLAYSFISPRKFSQLK 355 Query: 370 AIETYIGHSI 379 +E Y+ + Sbjct: 356 KLEYYLKEKV 365 >UniRef50_D2VEC4 DEAD/DEAH box helicase n=1 Tax=Naegleria gruberi RepID=D2VEC4_NAEGR Length = 535 Score = 236 bits (603), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 143/394 (36%), Positives = 212/394 (53%), Gaps = 18/394 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALP-LTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + LH ++ ++K G+ TPIQ ++P + + RD+ AQTG+GKT AFL + Sbjct: 107 FEEADLHELLMTNVKKSGYTKPTPIQKHSMPAIVTSKRDMMACAQTGSGKTAAFLLPIIN 166 Query: 70 YLLSHPAIADRK-----VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 LL D++ P+A+I+APTREL QI+ + T LK + YGG Sbjct: 167 ALLKSGIHKDKRRFAPNKGNPKAVILAPTRELCQQIYDECRKFIFQTYLKTVVVYGGASS 226 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q+K LE GVDIL+GT GR+ D+ ++ +++ +Q +VLDEADRM D+GF IR + Sbjct: 227 GYQMKQLERGVDILVGTPGRMNDFIQREKLDMSGVQYLVLDEADRMLDMGFEPQIRSIVE 286 Query: 185 R--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 MPP RL +L+SAT ++LA + +++ +++V T I + + Sbjct: 287 GSGMPPKGDRLTLLYSATFPKETQKLALDFLHDELFVQVGIIGGTTDNITQSFYQVDRRG 346 Query: 243 KM-RLLQTLIEE-EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 K +L++ L E+ E ++ ++F K C+ I+ L G + ++ GD Q+ R R L Sbjct: 347 KQDKLVEVLTEKKEEREKTLVFVQQKSTCDRIYELLTPLGFKCSVIHGDKDQRSRERSLR 406 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL- 359 +F G +ILVATDVAARGL I V HV NYDLP + + Y+HRIGRTGR G G + + Sbjct: 407 QFKDGYTNILVATDVAARGLDIEKVAHVINYDLPKEIDSYIHRIGRTGRVGNLGIATAFF 466 Query: 360 -------ACEEYALNLPAIETYIGHSIPVSKYNP 386 C E L I I + YNP Sbjct: 467 DPSEDGKLCRELVKILKDANQEIPEFIENAAYNP 500 >UniRef50_C0N6Y6 DEAD/DEAH box helicase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6Y6_9GAMM Length = 402 Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 147/376 (39%), Positives = 205/376 (54%), Gaps = 8/376 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F D L ++ A KG+ T IQ A+PL LAG DV A TGTGKT AF+ Sbjct: 2 QFEDLMLDESLLLAASDKGYKEPTLIQQEAIPLLLAGEDVLACAATGTGKTAAFVLPLLQ 61 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 LL P P+ALI+APTRELA QI L +A + + GG QL Sbjct: 62 KLLDEP----NHGRLPKALILAPTRELAFQIQHVIHHLGKANQPHIAMVTGGQAPTAQLA 117 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE+G DI+I T GRL++ + +L I+ VV+DEADRM D+G D+ + + A Sbjct: 118 YLENGCDIVIATPGRLLNLVENEQADLSEIEFVVIDEADRMLDMGQGPDVANVLATITTA 177 Query: 190 NQRLNMLFSATLSYRVREL-AFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLL 247 Q LFSATL+ EL A + NA IEV+ + ++ ++++ N E K LL Sbjct: 178 FQ--TSLFSATLAGSGVELFANALLPNASRIEVDAANQYAQQVSQQVYLADNREHKQALL 235 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I++ + A+IF N K R EE+ L + ++ GD Q R +F +G + Sbjct: 236 AAVIKQTDCESALIFCNKKERAEEVSAFLQSQNISAQVVHGDFNQADRRERTRKFRQGKV 295 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATDVAARGL +P V+HV NYD+P + Y+HR+GRTGRAG +G +++L N Sbjct: 296 KALVATDVAARGLDLPQVSHVINYDVPFRGDIYIHRVGRTGRAGQTGTAVNLVEPHDHKN 355 Query: 368 LPAIETYIGHSIPVSK 383 L +E +IG +PV K Sbjct: 356 LQRVEHHIGQPLPVLK 371 >UniRef50_C1CWT4 Putative DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWT4_DEIDV Length = 602 Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 141/347 (40%), Positives = 200/347 (57%), Gaps = 11/347 (3%) Query: 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLL 72 D + P++ L ++G +PIQA +LPLTLAGRD+ G+A+TGTGKT+AF L Sbjct: 4 DQLIAPELAARLAERGITEASPIQAESLPLTLAGRDMIGRARTGTGKTLAFALPIIQKL- 62 Query: 73 SHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGDGYDKQLKVL 131 P+ + PRA+++APTRELA Q+ AE +++ GL YGG Y Q L Sbjct: 63 -EPS--RERARPPRAIVVAPTRELAKQV---AEEFSKSGVGLTTVTVYGGASYAPQENAL 116 Query: 132 ESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQ 191 GVD+++GT GRLID+ ++ +++L A++ VLDEAD M +GF I + ++ P + Q Sbjct: 117 RRGVDVVVGTPGRLIDHLERGNLDLSAVEFAVLDEADEMLSVGFADAIETILQKTPDSRQ 176 Query: 192 RLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKT-GHRIKEELFYPSNEEKMRLLQTL 250 MLFSATL+ + L+ + +++ E K+ + E L + R+L L Sbjct: 177 --TMLFSATLNNDINRLSRNYLREPVIVDMVGEGKSQAAQTVEHLKVRVGRSRTRVLADL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + P++AI+F TK +E+ L G L GD+AQ +R R L F G + +L Sbjct: 235 LTIYNPEKAIVFTRTKREADELANELIHRGLEAEALHGDLAQSQRERALGAFRSGRVGVL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 VATDVAARGL IP V V Y LP D E YVHR GRTGRAG +G +I Sbjct: 295 VATDVAARGLDIPEVDLVVQYHLPQDPESYVHRSGRTGRAGRTGTAI 341 >UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1I3Q7_VITVI Length = 916 Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 139/354 (39%), Positives = 203/354 (57%), Gaps = 10/354 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F++ L + + + + + TPIQ A+P+ +AGRD+ AQTG+GKT AF Sbjct: 423 FAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICG 482 Query: 71 LLSHP-AIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 +L + + ++ P ALI++PTREL+ QIH +A+ + TGLK+ +AYGG +Q + Sbjct: 483 ILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFR 542 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR--MP 187 LE GVDIL+ T GRL+D ++ ++L I+ + LDEADRM D+GF IR + + MP Sbjct: 543 NLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQIRKIVEQMDMP 602 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK---- 243 P R MLFSAT ++ LA + ++N ++ V + I + + + + +K Sbjct: 603 PPGARQTMLFSATFPNEIQRLAADFLSNYIFLSVGRVGSSTDLIVQRVEFVEDTDKRYHL 662 Query: 244 MRLLQTLIEEEWPDR---AIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 M LLQ+ + P + ++F TK + + L +G + GD Q +R R L Sbjct: 663 MDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERALK 722 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG 354 F G I+VATDVAARGL IP V HV N+DLP +DYVHRIGRTGRAG SG Sbjct: 723 SFKSGATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDYVHRIGRTGRAGKSG 776 >UniRef50_C4LK58 Putative ATP-dependent RNA helicase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LK58_CORK4 Length = 558 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 146/367 (39%), Positives = 205/367 (55%), Gaps = 17/367 (4%) Query: 7 TEQK----FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 TEQ F + + ++V+AL + G + IQ L LPL L G+D+ GQA+TG GKT+A Sbjct: 86 TEQSGTPTFEELGVAAEIVDALAEHGITHTFAIQELTLPLALDGKDLIGQARTGMGKTLA 145 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHAD----AEPLA----EATGLK 114 + + AI + PRAL++APTRELA Q+ D A LA E L+ Sbjct: 146 YGVPLLDRIFDDAAIPELD-GTPRALVVAPTRELAYQVADDLTLAARHLANFNEEHRSLR 204 Query: 115 LGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLG 174 + GG ++KQ+ L G D ++GT GRL+D K +NL + V+VLDEAD M DLG Sbjct: 205 VTTICGGHPFEKQIAQLREGTDCIVGTPGRLLDLCKNRELNLSHVAVLVLDEADEMLDLG 264 Query: 175 FIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVE--PEQKTGHRIK 232 F+ DI + +++P +R +LFSAT+ + LA MN +I E + T K Sbjct: 265 FLPDIEKILQQVP--EKRQTILFSATMPAPIMALARTFMNKPVHIRAEGTDDSTTHTTTK 322 Query: 233 EELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQ 292 + F K+ L +++ R IIF TK ++ LA G VG + GD+AQ Sbjct: 323 QVAFKNHKLNKLATLSAILQAHNRGRTIIFTRTKRSAADVADDLAQRGFLVGAVHGDMAQ 382 Query: 293 KKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGA 352 R + L+ F ++ILVATDVAARG+ + VTHV NY +PDD YVHRIGRTGRAG Sbjct: 383 PAREKSLNAFRSKKIEILVATDVAARGIDVDDVTHVINYQVPDDAMTYVHRIGRTGRAGH 442 Query: 353 SGHSISL 359 +G +++L Sbjct: 443 TGTAVTL 449 >UniRef50_Q2FKY7 DEAD/DEAH box helicase-like n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKY7_METHJ Length = 531 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 139/359 (38%), Positives = 206/359 (57%), Gaps = 12/359 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FSD L P +++A+ G+ TPIQ +PL LAG DVAGQA TGTGKT AF Sbjct: 6 FSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIE- 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQLK 129 L PA +R V + +++ P+RELAVQ+ + LA G+ + YGG ++Q+K Sbjct: 65 -LCQPA--NRNV---QTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIK 118 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV I+IGT GR+ID+ K+ + L A+ +VVLDEAD+M D+GF +DI + +P Sbjct: 119 ALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIP-- 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R ++ SAT + +++ N +++ ++ T +I++ K L Sbjct: 177 KERQTVILSATFPPEILDISRRFQKNPIDVKMVHQELTVPQIEQYYIEVREPAKADTLIR 236 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E P R IIF NT+ + + L A+G L G +AQ +R ++++ F +G L+I Sbjct: 237 VLEFYQPQRTIIFCNTQIAVDAVSSALKAEGFLADGLHGGMAQAQRDKVMNAFRKGQLEI 296 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC--EEYAL 366 L+ATDVAARG+ + + V N+D P D E YVHRIGRT RAG +G +IS E Y L Sbjct: 297 LIATDVAARGIDVEEIDLVCNFDFPQDDEYYVHRIGRTARAGRTGRAISFVSPRERYRL 355 >UniRef50_B0L0X0 VASA n=2 Tax=Penaeidae RepID=B0L0X0_FENCH Length = 712 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 137/366 (37%), Positives = 205/366 (56%), Gaps = 8/366 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L P ++E + K G+ TP+Q +P + GRD+ G AQTG+GKT AFL H+ Sbjct: 272 FQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMGCAQTGSGKTAAFLLPMLHH 331 Query: 71 LLSH--PAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 +L + P+ A + QP L++ PTRELA+QI +A + ++ K +AYGG L Sbjct: 332 ILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREARKFSHSSVAKCCVAYGGAAGFHHL 391 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF--RRM 186 K + SG IL+ T GRL+D+ ++ I +++ +VLDEADRM D+GF+ I+ + + M Sbjct: 392 KTIHSGCHILVATPGRLLDFVEKGKIVFSSLKYLVLDEADRMLDMGFLSSIKTVINHKTM 451 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEE-LFYPSNEEKMR 245 P R+ ++FSAT ++ELA +NN ++ V +K+E L P E+K + Sbjct: 452 TPTADRITLMFSATFPNEIQELASAFLNNYLFVVVGSVGAANTDVKQEVLCVPKFEKKAK 511 Query: 246 LLQTLIE---EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 L++ E ++ ++F K + + +L R + GD Q +R + L +F Sbjct: 512 LVEMCEEILINADDEKILVFVEQKRVADFVGTYLCEKNFRATTMHGDRYQAQREQALTDF 571 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G +ILVAT VAARGL I + V NYDLP + ++YVHRIGRTGR G G SIS E Sbjct: 572 RTGVFNILVATAVAARGLDIKGIGVVVNYDLPKEIDEYVHRIGRTGRLGNRGLSISFYDE 631 Query: 363 EYALNL 368 E + L Sbjct: 632 EADVCL 637 >UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=Bacteria RepID=DEAD_MYCTU Length = 563 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 141/370 (38%), Positives = 198/370 (53%), Gaps = 26/370 (7%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D +HP+V+ A+ G+ + T IQA +P +AG DV G AQTGTGKT AF Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG--------LKLGLAYGGD 122 + D P+AL++ PTRELA+Q+ AEA G L + YGG Sbjct: 75 I-------DITSKVPQALVLVPTRELALQV-------AEAFGRYGAYLSQLNVLPIYGGS 120 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y QL L G +++GT GR+ID+ ++ ++L + +VLDEAD M +GF D+ + Sbjct: 121 SYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERI 180 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 P Q LFSAT+ +R+L+ + +++ + + + I + Y Sbjct: 181 LSETPEYKQ--VALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQS--YIQVAR 236 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 KM L ++E E + I+F TK EEI L A G ++GDV Q +R R + Sbjct: 237 KMDALTRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITAL 296 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 GD+DILVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG ++ Sbjct: 297 RDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSP 356 Query: 363 EYALNLPAIE 372 L AIE Sbjct: 357 RELHLLKAIE 366 >UniRef50_A4EAF2 Putative uncharacterized protein n=4 Tax=Collinsella RepID=A4EAF2_9ACTN Length = 749 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 140/382 (36%), Positives = 206/382 (53%), Gaps = 19/382 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L +++ A+E G+ TP+QA ++P+ L GRD+ AQTGTGKT AFL T + Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPTMNN 107 Query: 71 L--LSHPAIADRKVNQ---------------PRALIMAPTRELAVQIHADAEPLAEATGL 113 L ++ P + + P L++ PTRELA QI A +A+ TG Sbjct: 108 LEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRELAQQIDEVAGKIADVTGH 167 Query: 114 KLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDL 173 GG Y Q L+ G DIL+ T GRL+D +Q +L ++V+VLDEADRM D+ Sbjct: 168 VAVTVVGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEADRMLDM 227 Query: 174 GFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKE 233 GF+ +R + R P +R +LFSATL + +++ +E+ P T + + Sbjct: 228 GFLPAVRRIVRETPA--ERQTLLFSATLDEEAVGEITDLVSDPARVEIAPATSTADTVDQ 285 Query: 234 ELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQK 293 +F S E K LL +++E P+R I+F TKHR + L G + + G+ +Q Sbjct: 286 FVFPVSIEAKNNLLPEFLKKEGPERTIVFMRTKHRADSCCRRLERKGIKAAAIHGNRSQA 345 Query: 294 KRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGAS 353 +R R L F G +D+LVATDV ARG+ I V +V N+D+P + DY+HRIGRTGRAG Sbjct: 346 QRERALSAFRDGTVDVLVATDVLARGIDISDVRYVVNFDVPAEPTDYIHRIGRTGRAGEL 405 Query: 354 GHSISLACEEYALNLPAIETYI 375 G +I+ E+ IE + Sbjct: 406 GWAITFVTEQDVDEFYEIEKLM 427 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttle... 601 e-170 UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 591 e-167 UniRef50_B1KQF6 ATP-dependent RNA helicase rhlB n=10 Tax=Proteob... 591 e-167 UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 591 e-167 UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=... 586 e-166 UniRef50_A1SAL1 ATP-dependent RNA helicase rhlB n=142 Tax=Gammap... 586 e-166 UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Ni... 585 e-166 UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 582 e-165 UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 579 e-164 UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Fi... 578 e-163 UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B... 577 e-163 UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteo... 576 e-163 UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Ni... 576 e-163 UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 576 e-163 UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=c... 574 e-162 UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root R... 574 e-162 UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria Rep... 573 e-162 UniRef50_B3RIS6 Putative uncharacterized protein n=1 Tax=Trichop... 573 e-162 UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=B... 573 e-162 UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Ta... 572 e-162 UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomona... 572 e-162 UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 571 e-161 UniRef50_P24783 ATP-dependent RNA helicase DBP2 n=131 Tax=Eukary... 571 e-161 UniRef50_P24782 ATP-dependent RNA helicase dbp2 n=63 Tax=Eukaryo... 570 e-161 UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Cl... 569 e-161 UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=c... 569 e-161 UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=C... 569 e-161 UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 569 e-161 UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hy... 568 e-160 UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family... 568 e-160 UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria R... 568 e-160 UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax... 568 e-160 UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Ta... 567 e-160 UniRef50_C9PMG6 ATP-dependent RNA helicase RhlB n=1 Tax=Pasteure... 567 e-160 UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus... 567 e-160 UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cell... 566 e-160 UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Cl... 566 e-160 UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Al... 565 e-160 UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 Rep... 565 e-159 UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=A... 565 e-159 UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clos... 565 e-159 UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Pr... 564 e-159 UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=B... 564 e-159 UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dy... 564 e-159 UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimo... 564 e-159 UniRef50_Q8MZI3 CG10077, isoform A n=15 Tax=Eukaryota RepID=Q8MZ... 564 e-159 UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 563 e-159 UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Cl... 563 e-159 UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular org... 563 e-159 UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteoba... 562 e-159 UniRef50_Q5CQW8 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+H... 562 e-159 UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein... 562 e-159 UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 562 e-159 UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=As... 562 e-158 UniRef50_O00571 ATP-dependent RNA helicase DDX3X n=262 Tax=cellu... 562 e-158 UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 T... 562 e-158 UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Eu... 561 e-158 UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2... 561 e-158 UniRef50_Q88NB7 ATP-dependent RNA helicase rhlB n=50 Tax=Gammapr... 561 e-158 UniRef50_Q92841 Probable ATP-dependent RNA helicase DDX17 n=25 T... 560 e-158 UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Ak... 560 e-158 UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 559 e-158 UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=A... 559 e-158 UniRef50_P17844 Probable ATP-dependent RNA helicase DDX5 n=52 Ta... 559 e-158 UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Br... 558 e-157 UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms R... 557 e-157 UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae Rep... 556 e-157 UniRef50_P24346 Putative ATP-dependent RNA helicase an3 n=63 Tax... 556 e-157 UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Sp... 556 e-157 UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 T... 556 e-157 UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Ne... 556 e-157 UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 ... 555 e-156 UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=O... 555 e-156 UniRef50_A6V0P4 ATP-dependent RNA helicase RhlB n=15 Tax=Pseudom... 554 e-156 UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bact... 554 e-156 UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zy... 554 e-156 UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Ch... 554 e-156 UniRef50_C4QFR3 DEAD box ATP-dependent RNA helicase, putative n=... 554 e-156 UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryo... 554 e-156 UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 ... 554 e-156 UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID... 554 e-156 UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Ko... 554 e-156 UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA 554 e-156 UniRef50_Q4UPY5 ATP-dependent RNA helicase rhlB n=186 Tax=Gammap... 553 e-156 UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Ta... 553 e-156 UniRef50_Q1AG34 Ded1-like DEAD-box RNA helicase n=3 Tax=Coelomat... 553 e-156 UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax... 552 e-156 UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hy... 552 e-156 UniRef50_Q1ECV0 LOC556764 protein (Fragment) n=21 Tax=Eukaryota ... 551 e-155 UniRef50_A5EYB1 ATP-dependent rna helicase Rhl n=1 Tax=Dicheloba... 551 e-155 UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=A... 551 e-155 UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria... 551 e-155 UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptos... 550 e-155 UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdema... 550 e-155 UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 550 e-155 UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepI... 550 e-155 UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulv... 549 e-155 UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT... 549 e-155 UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcu... 549 e-155 UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eg... 549 e-155 UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Nept... 549 e-155 UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospi... 549 e-154 UniRef50_A0LLL9 DEAD/DEAH box helicase domain protein n=2 Tax=De... 548 e-154 UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma ... 548 e-154 UniRef50_Q9VHP0 ATP-dependent RNA helicase bel n=13 Tax=Eukaryot... 548 e-154 UniRef50_A8REA9 Putative uncharacterized protein n=1 Tax=Eubacte... 548 e-154 UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria... 548 e-154 UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax... 548 e-154 UniRef50_C4Q2M5 DEAD box ATP-dependent RNA helicase, putative n=... 548 e-154 UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=De... 548 e-154 UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desu... 548 e-154 UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular orga... 548 e-154 UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=... 548 e-154 UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 548 e-154 UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box ... 547 e-154 UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family... 547 e-154 UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 547 e-154 UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gru... 547 e-154 UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms Rep... 547 e-154 UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Te... 547 e-154 UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptob... 547 e-154 UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=... 547 e-154 UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=B... 546 e-154 UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=De... 546 e-154 UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, s... 546 e-154 UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organism... 546 e-154 UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=... 546 e-154 UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fe... 546 e-154 UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepI... 546 e-154 UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform ... 546 e-154 UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pn... 545 e-153 UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacte... 545 e-153 UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteri... 545 e-153 UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabd... 545 e-153 UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ... 544 e-153 UniRef50_C5S9J5 DEAD/DEAH box helicase domain protein n=6 Tax=Ga... 544 e-153 UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 544 e-153 UniRef50_A3JG19 ATP-dependent RNA helicase n=1 Tax=Marinobacter ... 544 e-153 UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae... 543 e-153 UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured me... 543 e-153 UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicu... 543 e-153 UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 543 e-153 UniRef50_A8P4I3 ATP-dependent RNA helicase An3, putative n=2 Tax... 542 e-152 UniRef50_B7EQA6 cDNA clone:J023079L21, full insert sequence n=5 ... 542 e-152 UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=F... 541 e-152 UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA 541 e-152 UniRef50_C4LZM8 DEAD/DEAH box helicase, putative n=4 Tax=Entamoe... 541 e-152 UniRef50_B3L9V8 Helicase, putative n=6 Tax=Alveolata RepID=B3L9V... 541 e-152 UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. N... 541 e-152 UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 541 e-152 UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Ba... 541 e-152 UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=be... 540 e-152 UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=De... 540 e-152 UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=A... 540 e-152 UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Berm... 540 e-152 UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=... 540 e-152 UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteob... 539 e-152 UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=R... 539 e-152 UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lent... 539 e-152 UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SER... 539 e-152 UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=P... 539 e-152 UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmat... 539 e-152 UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus Re... 539 e-152 UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3... 539 e-152 UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=G... 539 e-152 UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria R... 539 e-151 UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Pr... 538 e-151 UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicas... 537 e-151 UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales Re... 537 e-151 UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A... 537 e-151 UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=An... 537 e-151 UniRef50_P19109 ATP-dependent RNA helicase p62 n=11 Tax=Eukaryot... 537 e-151 UniRef50_D1INE6 Whole genome shotgun sequence of line PN40024, s... 537 e-151 UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME 537 e-151 UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 537 e-151 UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Proc... 536 e-151 UniRef50_O26305 ATP-dependent RNA helicase, eIF-4A family n=1 Ta... 536 e-151 UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1... 536 e-151 UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (Dea... 536 e-151 UniRef50_Q54QS3 Probable ATP-dependent RNA helicase ddx3 n=3 Tax... 536 e-151 UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospi... 536 e-151 UniRef50_Q3J811 DEAD/DEAH box helicase-like n=2 Tax=Nitrosococcu... 536 e-151 UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gam... 535 e-150 UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Ve... 534 e-150 UniRef50_C6CYC6 DEAD/DEAH box helicase domain protein n=89 Tax=F... 534 e-150 UniRef50_B8A609 Novel protein similar to vertebrate DEAD (Asp-Gl... 534 e-150 UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=De... 534 e-150 UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatim... 534 e-150 UniRef50_UPI00006CD03A P68-like protein, putative n=1 Tax=Tetrah... 534 e-150 UniRef50_C8PPF9 ATP-dependent RNA helicase DbpA n=1 Tax=Treponem... 534 e-150 UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Cl... 534 e-150 UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteri... 534 e-150 UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24... 533 e-150 UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular or... 533 e-150 UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase prote... 533 e-150 UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alp... 533 e-150 UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 ... 533 e-150 UniRef50_D2VEC4 DEAD/DEAH box helicase n=1 Tax=Naegleria gruberi... 533 e-150 UniRef50_B6YWR7 DEAD/DEAH box RNA helicase n=3 Tax=Thermococcus ... 533 e-150 UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=... 532 e-150 UniRef50_B5ZGC1 DEAD/DEAH box helicase domain protein n=3 Tax=Ac... 532 e-150 UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 532 e-150 UniRef50_C5KE40 ATP-dependent RNA helicase ded-1, putative n=6 T... 532 e-150 UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=B... 532 e-149 UniRef50_Q6APU7 Related to ATP-dependent RNA helicase (RhlE) n=1... 532 e-149 UniRef50_D1IXE3 Whole genome shotgun sequence of line PN40024, s... 532 e-149 UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales ... 531 e-149 UniRef50_B5IG60 DEAD/DEAH box helicase domain protein n=2 Tax=Ac... 531 e-149 UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bac... 531 e-149 UniRef50_Q8D2Y1 DeaD protein n=2 Tax=Enterobacteriaceae RepID=Q8... 531 e-149 UniRef50_A9NFC3 DEAD box ATP-dependent RNA helicase n=1 Tax=Acho... 531 e-149 UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostri... 531 e-149 UniRef50_B4MZE1 GK18312 n=1 Tax=Drosophila willistoni RepID=B4MZ... 531 e-149 UniRef50_B3M5L4 GF23818 n=1 Tax=Drosophila ananassae RepID=B3M5L... 530 e-149 UniRef50_B2S5R2 ATP-dependent RNA helicase, DEAD/DEAH box family... 530 e-149 UniRef50_Q1N6E2 ATP-dependent RNA helicase n=1 Tax=Bermanella ma... 530 e-149 UniRef50_A4C3X3 RNA helicase DeaD n=3 Tax=Alteromonadales RepID=... 530 e-149 UniRef50_Q1QAQ0 DEAD/DEAH box helicase-like n=5 Tax=Gammaproteob... 530 e-149 UniRef50_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia... 529 e-149 UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria... 529 e-149 UniRef50_A3ZWP8 ATP-dependent RNA helicase n=1 Tax=Blastopirellu... 529 e-149 UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, s... 529 e-149 UniRef50_Q2BDP3 ATP-dependent RNA helicase n=2 Tax=Bacillus RepI... 529 e-149 UniRef50_Q388E8 ATP-dependent DEAD/H RNA helicase, putative n=4 ... 529 e-149 UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=En... 529 e-148 UniRef50_C4V8Q7 Putative uncharacterized protein n=1 Tax=Nosema ... 529 e-148 UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria Rep... 528 e-148 UniRef50_C5CB97 DNA/RNA helicase, superfamily II n=23 Tax=Bacter... 528 e-148 UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter... 528 e-148 UniRef50_B1V958 DEAD/DEAH box helicase-like n=4 Tax=Candidatus P... 527 e-148 UniRef50_Q86XP3 ATP-dependent RNA helicase DDX42 n=64 Tax=Eukary... 527 e-148 UniRef50_B0U160 DEAD-box subfamily ATP-dependent helicase n=18 T... 527 e-148 UniRef50_B9SAJ6 Dead box ATP-dependent RNA helicase, putative n=... 527 e-148 UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brev... 527 e-148 UniRef50_C1D891 Putative ATP-dependent RNA helicase protein n=1 ... 527 e-148 UniRef50_D0WN23 ATP-dependent RNA helicase DeaD n=1 Tax=Actinomy... 527 e-148 UniRef50_Q9GV13 Vasa-related protein CnVAS1 n=6 Tax=Eumetazoa Re... 526 e-148 UniRef50_Q15T34 DEAD/DEAH box helicase-like n=1 Tax=Pseudoaltero... 526 e-148 UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=G... 526 e-148 UniRef50_B1CAG5 Putative uncharacterized protein n=1 Tax=Anaerof... 526 e-148 UniRef50_Q9NQI0 Probable ATP-dependent RNA helicase DDX4 n=53 Ta... 526 e-148 UniRef50_C0QD57 RecQ2 n=3 Tax=Desulfobacterales RepID=C0QD57_DESAH 525 e-148 UniRef50_C0AEG7 DEAD/DEAH box helicase domain protein (Fragment)... 525 e-148 UniRef50_A6LUG3 DEAD/DEAH box helicase domain protein n=33 Tax=F... 525 e-148 UniRef50_P09052 ATP-dependent RNA helicase vasa n=39 Tax=Eumetaz... 525 e-147 UniRef50_A4BET4 DEAD/DEAH box helicase-like protein n=1 Tax=Rein... 524 e-147 UniRef50_A9A5S3 DEAD/DEAH box helicase domain protein n=5 Tax=Th... 524 e-147 Sequences not found previously or not previously below threshold: UniRef50_C4Q0V4 DEAD box ATP-dependent RNA helicase, putative n=... 544 e-153 UniRef50_B7PA03 ATP-dependent helicase (DEAD box), putative n=1 ... 533 e-150 UniRef50_A2EVI2 DEAD/DEAH box helicase family protein n=1 Tax=Tr... 530 e-149 >UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G990_9FIRM Length = 538 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 152/412 (36%), Positives = 235/412 (57%), Gaps = 8/412 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KFS+F L ++ A+ K G+ TP+Q ++P+ L GRD+ G AQTGTGKT AF H Sbjct: 63 KFSEFGLKKDLLSAIRKAGYEEPTPVQEESIPVILEGRDMIGCAQTGTGKTAAFALPVLH 122 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L K + RAL++ PTRELA+QI + + L+ YGG Q+ Sbjct: 123 KLTLL------KRPRVRALVLTPTRELAIQIFDNFKKYGRYLHLRTVCLYGGAKRGPQIG 176 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G DIL+ T GRL+D+ Q+ ++L +++++VLDEADRM D+GF+ D+ + P Sbjct: 177 ALRRGADILVATPGRLLDFMGQDLVDLSSVEILVLDEADRMLDMGFLPDVSRIVESTP-- 234 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 ++R ++FSAT+ VR+LA + + ++V PE + ++++L + S E+K ++ + Sbjct: 235 SKRQTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEAADTVEQKLIFSSREDKREIIAS 294 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ +E + AI+F TKH +++ L G + GD Q +R L+ F G + + Sbjct: 295 LLTDEAVESAIVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQRQDALNRFKSGKVRV 354 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 +VATDVAARGL IP ++HVFNYD+P++ Y+HRIGRTGRAG SG +I+L CE L Sbjct: 355 MVATDVAARGLDIPKLSHVFNYDVPEEAGAYIHRIGRTGRAGESGIAITLCCEAELDALR 414 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 +E + IP + + + + R R G R+G +N +SG Sbjct: 415 EVEELLEKPIPELQTQWSLPLERKARKGKGGRTRHGRSGYRSGGQKNAGKSG 466 >UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WWM6_ALIAD Length = 541 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 145/395 (36%), Positives = 221/395 (55%), Gaps = 10/395 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 + F F L+ +V++A+ GF +PIQA +P+ L GRDV GQAQTGTGKT AF Sbjct: 15 SMSSFESFGLNRRVLQAIHDMGFEEPSPIQAACIPVVLEGRDVIGQAQTGTGKTAAFGIP 74 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 + + P + +A+++ PTRELA+Q+ + +A+ ++ YGG Sbjct: 75 LVERVSTEP--------RVQAIVLTPTRELAIQVAGEIRKIAKYKRVRSVPIYGGQSIVH 126 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q++ L+ GV I+IGT GR++D+ + ++L +++VVLDEAD M D+GFI DI + R Sbjct: 127 QIRALKQGVQIVIGTPGRVLDHIHRGTLSLSDVRMVVLDEADEMLDMGFIDDIEAILRET 186 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P + R MLFSAT V+ LA M + ++I V + T +I + + K+ Sbjct: 187 P--SDRQTMLFSATFPNEVKRLALRYMRDPQHITVNRGEVTVPQIDQVCYKVLERNKLDS 244 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L +++ E IIF TK +++ L A G+ L GD++Q +R R++ +F + + Sbjct: 245 LCRIVDSEDIQLGIIFCRTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKNE 304 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 +++LVATDVAARGL + VTHV NYD+P D E YVHRIGRTGRAG G +I+L Sbjct: 305 IELLVATDVAARGLDVDDVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREYK 364 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE I I V + + + + ++ Sbjct: 365 LLKQIEREIKQKITVREVPSLEDVAERQAEMWRSK 399 >UniRef50_B1KQF6 ATP-dependent RNA helicase rhlB n=10 Tax=Proteobacteria RepID=RHLB_SHEWM Length = 441 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 280/426 (65%), Positives = 339/426 (79%), Gaps = 5/426 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+THL+ QKF+DF+L+ ++ AL + GF CTPIQAL+LP+ L +D+AGQAQTGTGKT Sbjct: 1 MSETHLSNQKFADFSLNKEIKTALNESGFEFCTPIQALSLPILLQKKDIAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +AFL +TF +LLS P R++NQPRA+IMAPTRELA+QI DA LA+ TGLK+G+ YG Sbjct: 61 LAFLVATFDHLLSTPVPEGRQLNQPRAMIMAPTRELAIQIAKDATLLAKHTGLKVGIVYG 120 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G+ YD Q KVL+ GVDILIGTTGR+IDY +Q INL AIQ VVLDEADRM+DLGFIKDIR Sbjct: 121 GESYDVQRKVLDKGVDILIGTTGRIIDYVRQGIINLSAIQAVVLDEADRMFDLGFIKDIR 180 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 +LFRRMP A RLNMLFSATLS +V+ELA++ MN E + + P +KT IKEE+FYPS Sbjct: 181 FLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVVIAPNEKTSKNIKEEIFYPSM 240 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 +EKMRLL +LIEE+WP++AI+F+NTKH CE +W L DGHRVGLLTGDV QKKR+RIL+ Sbjct: 241 DEKMRLLLSLIEEDWPEKAIVFSNTKHSCENVWSWLEGDGHRVGLLTGDVPQKKRIRILE 300 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +FT G LDILVATDVAARGLHI V+HV+NYDLPDDCEDYVHRIGRTGRAG G S+S A Sbjct: 301 QFTEGKLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGKKGVSVSFA 360 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP---RTGNGPRRTGAP--R 415 CEEYALNLPAIE YI HSIPV+ Y+ + L+ D+P P+R+ R R G +G P R Sbjct: 361 CEEYALNLPAIEEYITHSIPVTNYDSEGLLDDIPAPIRVHRKHNNRPQQGRNNSGRPQGR 420 Query: 416 NRRRSG 421 N R+G Sbjct: 421 NGNRAG 426 >UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWU0_9PLAN Length = 598 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 162/404 (40%), Positives = 223/404 (55%), Gaps = 5/404 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F D L +V AL + T IQ A+P +AGRD+ G AQTGTGKT AF Sbjct: 1 MSFEDLGLAEPLVRALNAANYTEPTAIQLQAIPPAIAGRDLQGCAQTGTGKTAAFALPLL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L+ +P + PRAL+++PTRELA QIH YGG Q+ Sbjct: 61 DRLIKNPRQGKLRGRLPRALVLSPTRELAGQIHDSVRRYGRHAMQNSLTIYGGVSQVPQV 120 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L +G D+LI T GRL D +Q +INL I+V VLDEADRM D+GF+ DIR + ++P Sbjct: 121 KGLNAGQDVLIATPGRLCDLMQQGYINLSEIEVFVLDEADRMLDMGFMPDIRRIIAKLP- 179 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 Q+ +LFSAT+ +++LA + +++ I +EPE+ T I + L+Y + K LL Sbjct: 180 -QQKQTLLFSATMPPEIQKLASQLLHDPVEINIEPERATADGITQSLYYVPTKHKPELLA 238 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++++ E RA++F TKH C + L G +V + G+ +Q R R L F G + Sbjct: 239 SVLKREEVTRAVVFVRTKHGCNKAALQLEKTGLKVDAIHGNKSQSARQRTLYAFKNGHIQ 298 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGL + V+HV NYDLP + E YVHRIGRTGRAG SG +IS +E L Sbjct: 299 VLVATDVAARGLDVTGVSHVINYDLPMEPETYVHRIGRTGRAGKSGIAISFCDDEQRGLL 358 Query: 369 PAIETYIGHSIPVSKYNPD---ALMTDLPKPLRLTRPRTGNGPR 409 ++ +G IPV PD L ++ + R GN Sbjct: 359 RDVQRILGKKIPVENEMPDGIPGLPANIDRDGGAKRAPWGNKKP 402 >UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=root RepID=C7PD17_CHIPD Length = 492 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 156/422 (36%), Positives = 223/422 (52%), Gaps = 9/422 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 LT F L +++AL+ +G+ TPIQ A+P L RD+ G AQTGTGKT AF Sbjct: 24 LTILSFEQLGLIEPLLKALDNEGYTAPTPIQQQAIPHVLDTRDLLGCAQTGTGKTAAFAI 83 Query: 66 STFHYLLSHPAIADRKV-NQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 + RK +ALI+ PTRELA+QI + LK + +GG Sbjct: 84 PLLQLMHQDQQAQQRKGLRNIKALILTPTRELAIQIQESFTAYGKFLDLKSLVIFGGVSQ 143 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q + L+ GVDILI T GRL+D QN+I L I+ VLDEADRM D+GF+ D++ + Sbjct: 144 HPQTEALKKGVDILIATPGRLLDLISQNYITLRDIKYFVLDEADRMLDMGFVHDVQRVIV 203 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQM-NNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 ++P QR ++ FSAT+ ++ LA + NN +EV P T I + +++ + +K Sbjct: 204 KLPE--QRQSLFFSATMPPEIQTLAKAILRNNPAKVEVTPVSSTAETITQSMYFVNKNDK 261 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 LL +++++ ++F TKH + + L + G+ +Q R R L+ F Sbjct: 262 RNLLLHILKDKAIKTLLVFTRTKHGADRVVKDLHKAEITAEAIHGNKSQNARQRALNNFK 321 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 +LVATD+AARG+ I +THV NY+LP+ E YVHRIGRTGRAGA G +IS E Sbjct: 322 SQQTRVLVATDIAARGIDIDELTHVVNYELPNVPETYVHRIGRTGRAGADGIAISFCEPE 381 Query: 364 YALNLPAIETYIGHSIPVSKYNP----DALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 L I I IPV +P D++ PKP +P+ + PR +R R Sbjct: 382 EKAFLKDILKLISREIPVETEHPFHNGDSMALPAPKPAPQQKPKQQH-PRDKKGGFSRNR 440 Query: 420 SG 421 G Sbjct: 441 QG 442 >UniRef50_A1SAL1 ATP-dependent RNA helicase rhlB n=142 Tax=Gammaproteobacteria RepID=RHLB_SHEAM Length = 439 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 276/426 (64%), Positives = 347/426 (81%), Gaps = 6/426 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+THLT+QKF+D L +V +AL + GF +CTPIQAL+LP+ L +D+AGQAQTGTGKT Sbjct: 1 MSETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +AFL +TF++LL+ P R++NQPRA++MAPTRELA+QI DA L++ +GLK+G+ YG Sbjct: 61 LAFLVATFNHLLTTPVPEHRQLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYG 120 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G+GY+ Q KVL+ GVD+LIGTTGR+IDY +Q INLGAIQ VVLDEADRM+DLGFIKDIR Sbjct: 121 GEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQAVVLDEADRMFDLGFIKDIR 180 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 +LF RMP A +RLNMLFSATLS +V+ELA++ MN+ +E+ PE+KT IKEE+FYPS Sbjct: 181 FLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSM 240 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 E+K++LL +LIEE+WP++AI+FANTK++CE +W L ADGHRVGLLTGDV QKKRL+IL+ Sbjct: 241 EDKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILE 300 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +FT+ +LDILVATDVAARGLHI V+HV+NYDLPDDCEDYVHRIGRTGRAG G S+S A Sbjct: 301 QFTQSELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFA 360 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNG---PRRTGAPRNR 417 CEEYALNLPAIE YI HSIPV+ Y+ DAL+ D+P P+++ R G R G+PR Sbjct: 361 CEEYALNLPAIEDYIKHSIPVTSYDRDALI-DIPPPVKIHRKPHAGGRNLRDRNGSPRPS 419 Query: 418 R--RSG 421 RSG Sbjct: 420 GSHRSG 425 >UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Nitrosomonas europaea RepID=Q82T78_NITEU Length = 498 Score = 585 bits (1510), Expect = e-166, Method: Composition-based stats. Identities = 153/418 (36%), Positives = 226/418 (54%), Gaps = 9/418 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 + F+ L +++ A+ +G+ N TPIQA +P LAG+DV AQTGTGKT F Sbjct: 3 NDVTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLP 62 Query: 67 TFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + L ++ + P RALIMAPTRELA+QI + L+ + +GG + Sbjct: 63 LLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIE 122 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L++GV+IL+ T GRL+D +Q +N +++VLDEADRM D+GF+ DI+ + Sbjct: 123 PQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMAL 182 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 + P QR +++FSAT S +R+LA + IE + I + + + K Sbjct: 183 LSP--QRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNESISHVIHWVKPDSKFA 240 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL LI ++ +A+IF TKH + L+ + GD Q++R + L EF G Sbjct: 241 LLLHLIRQQNLKQALIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQALAEFKHG 300 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 D+ ILVATDVAARG+ I ++HV NY+LP + EDYVHRIGRTGRAG+ G +ISL E Sbjct: 301 DVQILVATDVAARGIDIEKLSHVINYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHEK 360 Query: 366 LNLPAIETYIGHSIPVSK---YNPDALMTDLPKPL---RLTRPRTGNGPRRTGAPRNR 417 L IE + + + ++ + LP R GN P G+ ++R Sbjct: 361 ELLANIEKLLNAKLETEQIAGFDAEQFARSLPDRKNRMSAGNSRYGNKPMENGSEKSR 418 >UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZJL9_THASP Length = 545 Score = 582 bits (1502), Expect = e-165, Method: Composition-based stats. Identities = 160/418 (38%), Positives = 225/418 (53%), Gaps = 9/418 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+D L P++++A+ G+ TPIQ A+P+ +AG+DV G AQTGTGKT F Sbjct: 1 MSFADLGLIPELLQAVTDAGYTEPTPIQRQAIPIVIAGKDVMGGAQTGTGKTAGFTLPLL 60 Query: 69 HYLLSHPAIADRKVN-QPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 H + H + Q RALI+APTRELA+Q+ + ++ L+ YGG Q Sbjct: 61 HRIARHANTSTSPARHQTRALILAPTRELAMQVFESVKTYSKHLPLRSVCVYGGVDIRPQ 120 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L G++I+I T GRL+D+ +Q INL ++V+VLDEADRM D+GFI DI+ + +P Sbjct: 121 QAELRRGIEIVIATPGRLLDHLEQKSINLSQVEVLVLDEADRMLDMGFIPDIKRILALLP 180 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 QR ++LFSAT S ++ LA + + + IEV I + S+ K LL Sbjct: 181 --KQRQSLLFSATFSDEIKRLADQMLKEPQLIEVARRNMVSETITHVVHPVSSGMKRNLL 238 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+ + +A++F +TK C + +L G + GD Q++R L+ F G L Sbjct: 239 AHLLRHKPDTQALVFVDTKLMCGRLAHYLERSGISADAIHGDKGQQQRTDTLEAFKSGKL 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVAARGL I + V N++LP EDYVHRIGRTGRAG G++ISL E Sbjct: 299 RVLVATDVAARGLDIDELPFVINFELPHTAEDYVHRIGRTGRAGHHGYAISLVSSEEKHW 358 Query: 368 LPAIETYIGHSIP---VSKYNPDALMTDL-PKPLRLTRPRTGNGPRRTGAP--RNRRR 419 L IE I IP V ++PD + + R RP AP R+ R Sbjct: 359 LSEIEKLIKLQIPQERVPGFDPDPDFHEAGSRGHRGRRPAAAAADTEAQAPAARSGGR 416 >UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSA7_BACS4 Length = 528 Score = 579 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 138/385 (35%), Positives = 214/385 (55%), Gaps = 10/385 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF DF + + +A++ GF +PIQ +P L G DV GQAQTGTGKT AF Sbjct: 2 MKFEDFQISNDIKKAIKDMGFEAPSPIQEKVIPEILKGHDVIGQAQTGTGKTAAFGIPLL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + S Q ++LI+ PTRELA+Q+ + + L++ ++ YGG Q+ Sbjct: 62 EKVTSD--------RQVQSLILTPTRELAIQVAGELQKLSKFKRSQILPIYGGQSIGHQI 113 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L+ GV +++GT GR++D+ + + L ++ ++LDEAD M D+GFI+DI + +++ Sbjct: 114 KALKRGVQVVVGTPGRVLDHLNRKTLQLRSVHTLILDEADEMLDMGFIEDIEKILQQV-- 171 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R MLFSAT+ +R+L+ + MNN + + + + T I + F + K+ L Sbjct: 172 NTNRQTMLFSATMPPPIRKLSNKYMNNPKQVTISKGEVTAPSINQVYFKVLEKNKLDSLC 231 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +I+ E D IIF TK E+ L A G+ L GD+ Q +R ++ +F ++ Sbjct: 232 RVIDSETIDLGIIFCRTKKGVAELTEALQARGYMADGLHGDLTQSQRDIVMKKFRDSSIE 291 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 L+ATDVAARG+ + V+HV NYD+P D E YVHRIGRTGRAG G +++L +L Sbjct: 292 FLIATDVAARGIDVENVSHVINYDIPQDPESYVHRIGRTGRAGREGVAVTLVTPREMKHL 351 Query: 369 PAIETYIGHSIPVSKYNPDALMTDL 393 +IE I +IP + + + Sbjct: 352 RSIEAEIKMTIPSQRIPSVEEVVEK 376 >UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Firmicutes RepID=D2RJY3_ACIFE Length = 544 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 141/408 (34%), Positives = 225/408 (55%), Gaps = 15/408 (3%) Query: 1 MSKTHLTEQ----KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTG 56 M T + F D L K++ AL++ GF +PIQ A+P+ L G D+ GQAQTG Sbjct: 7 MENTTAESKPEITSFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMALEGEDLIGQAQTG 66 Query: 57 TGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLG 116 TGKT AF + + K +AL+M+PTREL +Q+ + + + +++ Sbjct: 67 TGKTAAFGIPIIQKI-------NEKDRHIQALVMSPTRELCIQVADEISKIGKTKRIRVL 119 Query: 117 LAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFI 176 YGG ++Q++ L+ G+ ++IGT GRL+D+ ++ I+L + +VLDEAD M D+GF+ Sbjct: 120 PVYGGQPIERQIRSLKRGIQVVIGTPGRLLDHIRRGTIDLEYVNFLVLDEADEMLDMGFV 179 Query: 177 KDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 D+ + + +PP +R MLFSAT+ + ++ + M + + + E T I + + Sbjct: 180 DDMENIIKNVPP--ERQTMLFSATMPRPILSISKKYMRAPKVVAIHKEVVTAPTIDQYYY 237 Query: 237 YPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 +K+ L +++ + IIF TK +E+ LA G+ L GD++Q +R Sbjct: 238 ET--RDKVDGLCRILDTTDDCKMIIFCRTKKGVDELVIALATRGYEAEGLHGDLSQNQRD 295 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 R++ +F G +DILVATDVAARGL I +THV N+D+P D E YVHRIGRTGRAG +G + Sbjct: 296 RVMKKFRSGQVDILVATDVAARGLDIDNITHVVNFDVPSDSESYVHRIGRTGRAGNTGVA 355 Query: 357 ISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 ++ L IE I I DA + + + +++ +T Sbjct: 356 LTFITPREFRQLKLIERSIKTKIIRGTLPTDASVLERQREQIVSKMQT 403 >UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B0TII3_HELMI Length = 540 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 141/392 (35%), Positives = 217/392 (55%), Gaps = 9/392 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF + L PKV +A+ GF +PIQA A+P+ + G+D+ GQAQTGTGKT F Sbjct: 19 KFGEIELSPKVAKAIFDMGFEEPSPIQAKAIPVIMQGKDLIGQAQTGTGKTATFGIPMAE 78 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + + + +AL++ PTRELA+Q+ + + LK YGG D+Q++ Sbjct: 79 TL-------NPRDGRVQALVLCPTRELAIQVAQEISKIGRQNDLKALPVYGGQSIDRQIR 131 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV ++IGT GR++D+ + + L +++VVLDEAD M D+GF++DI + + P Sbjct: 132 ALRYGVQVVIGTPGRILDHLSRKTLRLNNVRMVVLDEADEMLDMGFVEDIEAILKETPE- 190 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSAT+ +++LA + M E++ + ++ T I++ + +K+ L Sbjct: 191 -ERQTLLFSATMPGPIQQLARQYMKEPEFVTISRDKLTVPLIEQVYYECKESQKVDALCR 249 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +++ E +IIF TK +E+ L G+ L GD+ Q +R R++ +F G ++ Sbjct: 250 ILDMEEIGSSIIFCRTKRGVDELVAALETRGYFAEGLHGDLTQAQRDRVMKKFRDGKAEL 309 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVAARGL + VTHV NYD+P D E YVHRIGRTGRAG G +I+L L Sbjct: 310 LIATDVAARGLDVENVTHVINYDIPQDPESYVHRIGRTGRAGRKGIAITLINYREYRQLK 369 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 IE I A + + K + Sbjct: 370 LIERVTKARIQRRDLPSMADIVERQKEAHKMK 401 >UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteobacteria RepID=Q2SZW4_BURTA Length = 571 Score = 576 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 149/379 (39%), Positives = 219/379 (57%), Gaps = 3/379 (0%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F F L +++ A+ ++G+ TPIQA A+P+ L+GRDV G AQTGTGKT +F Sbjct: 102 TFDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 161 Query: 70 YLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LL + P RALI+ PTRELA Q+ A+ A+ T L+ + +GG + Q+ Sbjct: 162 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 221 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L GV+ILI T GRL+D+ +Q NLG +Q++VLDEADRM D+GF+ D++ + +P Sbjct: 222 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLP- 280 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSAT S +++LA + N + IEV + + ++ + +K + Sbjct: 281 -KERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 339 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI + + I+F N+K + + DG + GD +Q +R++ LD F RG+++ Sbjct: 340 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIE 399 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 LVATDVAARGL I + V N+DLP + EDYVHRIGRTGRAGASG ++SL L Sbjct: 400 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 459 Query: 369 PAIETYIGHSIPVSKYNPD 387 IE I ++ + D Sbjct: 460 ADIEKLIKRTLSLETLELD 478 >UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AFH3_NITEC Length = 488 Score = 576 bits (1485), Expect = e-163, Method: Composition-based stats. Identities = 152/423 (35%), Positives = 231/423 (54%), Gaps = 10/423 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 ++ F L +++ A+ +G+ N TPIQA +P LAG+DV AQTGTGKT F Sbjct: 3 SDVTFEQLDLSSEILRAVIDEGYINPTPIQAQVIPPILAGKDVMASAQTGTGKTAGFTLP 62 Query: 67 TFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 H+L +H + + P RALIMAPTRELA+QI + L+ + +GG + Sbjct: 63 LLHHLQAHASSSTSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTTVVFGGVNIE 122 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L +GV+IL+ T GRL+D + +N +++VLDEADRM D+GF+ DI+ + Sbjct: 123 PQITELRNGVEILVATPGRLLDLVEHKAVNFSKTEILVLDEADRMLDMGFLPDIKKVMAL 182 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P +QR +++FSAT S +R+LA + + IEV + I + E K Sbjct: 183 LP--SQRQSLMFSATFSDEIRKLADGLLKHPVRIEVAAQNTINESISHVVHRIKPESKFA 240 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL L++++ +A++F TKH ++ L+ + GD Q++R + L EF G Sbjct: 241 LLLHLVKQQDLKQALVFVKTKHGASQLAQMLSHHKILALAIHGDKNQQQRTQALSEFKHG 300 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 D+ ILVATDVAARG+ I ++HV NY+LP + EDYVHRIGRTGRAG+ G +ISL E Sbjct: 301 DVQILVATDVAARGIDIEKLSHVVNYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHET 360 Query: 366 LNLPAIETYIGHSIPVSK---YNPDALMTDLPKPLRLTRP----RTGNGPRRTGAPRNRR 418 L +IE + + + + ++ + + LP R+ + R+ Sbjct: 361 ELLTSIEKLLNTKLEIEQIAGFDAELFVRSLPDRKNRVSADIARRSNKQAEVANGEKTRK 420 Query: 419 RSG 421 SG Sbjct: 421 YSG 423 >UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D2QGG1_9SPHI Length = 485 Score = 576 bits (1485), Expect = e-163, Method: Composition-based stats. Identities = 142/381 (37%), Positives = 217/381 (56%), Gaps = 2/381 (0%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 +FS+ +L +++AL ++G+ N TPIQ A+P+ L+ RD+ G AQTGTGKT AF Sbjct: 1 MQFSELSLIDPILKALTEEGYTNPTPIQEKAIPILLSRRDLLGCAQTGTGKTAAFAIPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + + + + LI+ PTRELA+QI ++ + +GG Q+ Sbjct: 61 QLLSEERSKSTGGPRRIKTLILTPTRELAIQIAESFTAYGRHLNIRNTVIFGGVSQHSQV 120 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L++GVD+LI T GRL+D Q I+L +Q VLDEADRM D+GFI D++ + ++P Sbjct: 121 NTLKAGVDVLIATPGRLLDLMNQGFISLRDVQFFVLDEADRMLDMGFIHDVKKVITKLPT 180 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R ++ FSAT+ V +LA +NN +EV P T I++ +++ E+K +LL Sbjct: 181 H--RQSLFFSATMPPDVAKLADTILNNPAKVEVTPVSSTADTIEQAMYFVGKEDKRKLLV 238 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++++ A++FA TKH +++ L G + G+ +Q R R L F + Sbjct: 239 HILDDKNIKSALVFARTKHGADKVVKDLLKAGIGAEAIHGNKSQNARQRALSNFKSRETR 298 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ + ++HV NY+LP+ E YVHRIGRTGRAG G ++S E L Sbjct: 299 VLVATDIAARGIDVDELSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCDAEETEYL 358 Query: 369 PAIETYIGHSIPVSKYNPDAL 389 I IG +PV +P L Sbjct: 359 RDIHKLIGKRVPVIDNHPYVL 379 >UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=cellular organisms RepID=A2SQE1_METLZ Length = 656 Score = 574 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 140/405 (34%), Positives = 230/405 (56%), Gaps = 14/405 (3%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M +T + F++FA+ ++++A+ GF TPIQA+A+P L G+DV GQAQTGTGKT Sbjct: 1 MEET----KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKT 56 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAY 119 AF L D +AL+++PTRELA+Q + L + GL + Y Sbjct: 57 AAFGIPIIERL-------DPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIY 109 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG ++QL+ L+ V ++IGT GR+ID+ K+ ++L ++ + +LDEAD+M D+GF +DI Sbjct: 110 GGQPIERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDI 169 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 +FR P R +LFSAT+ + ++ + +++++ ++ T +I++ Sbjct: 170 EDIFRDTP--KDRQTILFSATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTYIEVR 227 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K+ L ++ P+ A++F NTK +++ + A G+ V L GD+ Q++R R++ Sbjct: 228 ERDKLEALCRTLDMNNPELALVFCNTKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVM 287 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 F G +D+L+ATDVAARG+ + V VFNYD+P D E YVHRIGRT RAG +G S++ Sbjct: 288 ARFRSGSIDVLIATDVAARGIDVDDVDIVFNYDVPQDVEYYVHRIGRTARAGRTGKSVTF 347 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 L I+ Y I + + ++ + + L + R Sbjct: 348 VAPREIYKLRDIQRYAKIQIAKTPLPTLDDVAEMKQQIFLDKVRD 392 >UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root RepID=RHLE_ECOLI Length = 454 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 148/389 (38%), Positives = 218/389 (56%), Gaps = 6/389 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L P ++ A+ ++G+ TPIQ A+P L GRD+ AQTGTGKT F Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 +L++ A + RALI+ PTRELA QI + ++ ++ + +GG + Q+ Sbjct: 61 QHLITRQPHAKGR-RPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L GVD+L+ T GRL+D QN + L ++++VLDEADRM D+GFI DIR + ++P Sbjct: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+LFSAT S ++ LA + ++N IEV ++ + + + + K LL Sbjct: 180 --KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +I + + ++F TKH + L DG R + G+ +Q R R L +F GD+ Sbjct: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARGL I + HV NY+LP+ EDYVHRIGRTGRA A+G ++SL C + L Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 Query: 369 PAIETYIGHSIP---VSKYNPDALMTDLP 394 IE + IP + Y PD + P Sbjct: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEP 386 >UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria RepID=A6T3R2_JANMA Length = 778 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 148/394 (37%), Positives = 215/394 (54%), Gaps = 12/394 (3%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+ F+D L ++ L++ G+ + +PIQA +PL L RDV GQAQTGTGKT Sbjct: 1 MSEPSFPL--FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKT 58 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAY 119 +F + D K P+AL++APTRELA+Q+ + A G + Y Sbjct: 59 ASFALPILARI-------DIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIY 111 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y QL L GV +++GT GR+ID+ ++ ++L I+ +VLDEAD M +GFI D+ Sbjct: 112 GGQSYGAQLSALRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDV 171 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + ++ P + R LFSAT+ ++ +A + + + I V + T I++ + S Sbjct: 172 ETILQKTPES--RQTALFSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRYWLVS 229 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K+ L ++E E D IIFA TK EE+ L A G + GD+ Q++R R + Sbjct: 230 GMQKLDALTRILEAENFDGMIIFARTKLGTEELASKLQARGFSAAAINGDIQQQQRERTI 289 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + G +DILVATDVAARGL + ++HV NYD+P D E Y HRIGRTGRAG SG +I Sbjct: 290 QQLKDGKIDILVATDVAARGLDVERISHVINYDVPHDPESYTHRIGRTGRAGRSGEAILF 349 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDL 393 L AIE I V + + D+ Sbjct: 350 IAPRERNLLKAIERATRQPISVLELPSVEAVNDV 383 >UniRef50_B3RIS6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RIS6_TRIAD Length = 654 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 143/417 (34%), Positives = 213/417 (51%), Gaps = 17/417 (4%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 FS+ + V+ + +GF TPIQA + P+ L+GRDV G AQTG+GKT+A++ + Sbjct: 80 SFSEASFPDYVMSEINNQGFKLPTPIQAQSWPVGLSGRDVVGIAQTGSGKTLAYVLPSII 139 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 ++ + P + R + P ALI+ PTRELA Q+H+ + + YGG QL+ Sbjct: 140 HIKNQPPL--RHGDGPIALILCPTRELAQQVHSVSTTFGRLARINCACIYGGSPKGPQLR 197 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV+I + T GRL+D+ + NL +VLDEADRM D+GF I+ + + Sbjct: 198 ELSRGVEICVATPGRLLDFLESRRTNLNRCSYLVLDEADRMLDMGFEPQIKQIIGSIKCP 257 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLLQ 248 R +++SAT +R LA E + + I + + T H IK+ + EEK L Sbjct: 258 --RQTVMWSATWPKEIRTLAREFLRDYVQINIGSSDLTTNHNIKQIVEVCREEEKEDKLC 315 Query: 249 TLIE---EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ + + I+F TK + + + L G V + GD Q +R R+L EF G Sbjct: 316 KLLSDILRQDEKKTIVFVETKKKSDYLSRRLVRSGWPVLCIHGDKCQSERDRVLSEFRSG 375 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE--- 362 + +L+ATDVAARGL I V V NYD P++ EDYVHRIGRT R+G +G + + Sbjct: 376 RIPVLIATDVAARGLDISDVKLVINYDFPNNSEDYVHRIGRTARSGKTGTAYTFFTASNI 435 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDAL-MTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 + NL A+ I NPD + + D + + R R R+R Sbjct: 436 RQSPNLIALLREANQPI-----NPDLIQLGDAARAEMAQKHRGKMRGRDRFYNRDRN 487 >UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=Bacteria RepID=Q0HYG8_SHESR Length = 549 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 149/421 (35%), Positives = 220/421 (52%), Gaps = 13/421 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FS L + +A+ ++G+ +PIQA A+P L G+DV AQTGTGKT F Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L K Q RAL++ PTRELA Q+ E + L+ + +GG + Q+ Sbjct: 61 ELLSKG---NKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQI 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVD+L+ T GRL+D +QN + ++++VLDEADRM D+GFI+DI+ + +P Sbjct: 118 QKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPA 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N++FSAT S +RELA +N I V P + +K+ + +K LL Sbjct: 178 --KRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLI 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI++E + ++F+ TKH + L + G+ +Q R + L +F G++ Sbjct: 236 QLIKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVR 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARGL I + V N+DLP+ EDYVHRIGRTGRAGASG ++SL E L Sbjct: 296 VLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEFKLL 355 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPR--------TGNGPRRTGAPRNRRRS 420 IE I + + LP+ + + + R G P R + Sbjct: 356 RDIERLINRVLERQEIEGFGPAHALPESTLIAHGKDNKVKAVASQRKHRSAGKPTPRTGT 415 Query: 421 G 421 G Sbjct: 416 G 416 >UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Tax=Firmicutes RepID=CSHA_GEOKA Length = 467 Score = 572 bits (1476), Expect = e-162, Method: Composition-based stats. Identities = 141/375 (37%), Positives = 219/375 (58%), Gaps = 9/375 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + L +V++A+E+ GF TPIQA +PL+L +DV GQAQTGTGKT AF Sbjct: 2 TTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIV 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + K + +AL++APTRELA+Q+ + + +++ YGG ++Q+ Sbjct: 62 EKV-------NVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQI 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ +++GT GR+ID+ + + L + VVLDEAD M ++GFI+DI + +P Sbjct: 115 RALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPA 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSAT+ +R +A MN E ++V+ ++ T I++ ++K +L Sbjct: 175 --ERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILT 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L++ + P+ AI+F TK R +E+ L G+ + GD++Q KRL +L +F G ++ Sbjct: 233 RLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIE 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL I VTHV+N+D+P D E YVHRIGRTGRAG +G +++ L Sbjct: 293 ILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQL 352 Query: 369 PAIETYIGHSIPVSK 383 IE + K Sbjct: 353 HHIERTTKRKMERMK 367 >UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVQ9_SYNWW Length = 530 Score = 572 bits (1476), Expect = e-162, Method: Composition-based stats. Identities = 145/402 (36%), Positives = 230/402 (57%), Gaps = 10/402 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ + F L +++ +++KGF TPIQ ++P+ +AG D+ GQAQTGTGKT +F Sbjct: 1 MSFENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + ++ K +AL++ PTRELAVQ+ + L+ +++ YGG + Sbjct: 61 PILNRVI--------KGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIE 112 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 QL+ L +I++GT GRL+D+ + I+L ++ VVLDEAD M D+GF+ DI+ + + Sbjct: 113 LQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQ 172 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P +R LFSATL VREL + M E I +E ++T I++ + ++ K+ Sbjct: 173 CP--RERQTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQVNSRRKIE 230 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L +I+ + P ++IF TK +E+ L + G+ L GD++Q++R ++ F +G Sbjct: 231 TLCRIIDAQQPPISLIFCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVMHGFRQG 290 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 + ILVATD+AARGL I VTHVFN+D+P+D + Y+HR+GRTGRAG SG +I+L Sbjct: 291 NTKILVATDLAARGLDIELVTHVFNFDIPEDLDSYIHRVGRTGRAGRSGIAITLVEPTQI 350 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNG 407 L IE + G I + A + + L L R R + Sbjct: 351 RLLRMIERHTGKRIERALLPTLAEAVEKRQDLLLERVRQASA 392 >UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=B7VQT9_VIBSL Length = 523 Score = 571 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 149/413 (36%), Positives = 225/413 (54%), Gaps = 5/413 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+ L +++A+E +G+ +PIQ A+P L G+DV AQTGTGKT F Sbjct: 1 MSFTSLGLSEPILKAIEAQGYDKPSPIQEKAVPAVLTGKDVMAAAQTGTGKTAGFTLPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L P + + NQ RAL++ PTRELA Q++ L + +GG + Q+ Sbjct: 61 EMLSKGPRV---RQNQVRALVLTPTRELAAQVNGSVVKYGINLPLTSTVVFGGVKINPQM 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L G D+L+ T GRL+D QN + ++++VLDEADRM D+GFI+DIR + +P Sbjct: 118 QKLRKGSDVLVATPGRLLDLYNQNAVRFDQLEILVLDEADRMLDMGFIRDIRKILAFLP- 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+LFSAT S +R LA +NN I V P T +++ ++ ++K +L Sbjct: 177 -KKRQNLLFSATFSDDIRSLAKGLVNNPVEISVSPANSTAPTVEQSIYPVDKKKKAPMLA 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI++ + ++F+ TKH ++ L + G+ +Q R + L+ F G + Sbjct: 236 KLIKDNDWRQVLVFSKTKHGANKLARFLEEQDITSAPIHGNKSQGARTKALENFKTGKVR 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ IP + V N+DLP+ EDYVHRIGRTGRAG G +ISL C + L Sbjct: 296 VLVATDIAARGIDIPQLPQVVNFDLPNVSEDYVHRIGRTGRAGEVGKAISLVCADEVGEL 355 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 IE I + + A + LP+ +RP P++T + +RSG Sbjct: 356 FGIERLIQQVLERRELEGFAPVNKLPESRLDSRPIKPKKPKKTREHSDGQRSG 408 >UniRef50_P24783 ATP-dependent RNA helicase DBP2 n=131 Tax=Eukaryota RepID=DBP2_YEAST Length = 546 Score = 571 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 137/386 (35%), Positives = 211/386 (54%), Gaps = 11/386 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + V+ ++ +GF T IQ P+ L+GRD+ G A TG+GKT+++ Sbjct: 113 TTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGI 172 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ + P +A + P L++APTRELAVQI + ++ ++ YGG +Q+ Sbjct: 173 VHINAQPLLA--PGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQI 230 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L G +I+I T GRLID + NL + +VLDEADRM D+GF IR + ++ P Sbjct: 231 RDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRP 290 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLL 247 R +++SAT V++LA + +N+ ++V E H I + + S+ EK L Sbjct: 291 D--RQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRL 348 Query: 248 QTLIE---EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 +E ++ + +IFA+TK C++I +L DG + GD Q++R +L EF Sbjct: 349 NKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRN 408 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G I+VATDVAARG+ + + +V NYD+P + EDYVHRIGRTGRAGA+G +IS E+ Sbjct: 409 GRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQN 468 Query: 365 A---LNLPAIETYIGHSIPVSKYNPD 387 L +I +IP D Sbjct: 469 KGLGAKLISIMREANQNIPPELLKYD 494 >UniRef50_P24782 ATP-dependent RNA helicase dbp2 n=63 Tax=Eukaryota RepID=DBP2_SCHPO Length = 550 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 136/378 (35%), Positives = 207/378 (54%), Gaps = 11/378 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + V++ +++ GF TPIQ A P+ ++GRD+ G + TG+GKT+++ Sbjct: 122 TTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAI 181 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ + P ++ + P L++APTRELAVQI + +++ ++ YGG Q+ Sbjct: 182 VHINAQPLLS--PGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQI 239 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GV+I I T GRL+D N NL + +VLDEADRM D+GF IR + ++ P Sbjct: 240 RDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRP 299 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLL 247 R ++FSAT V+ LA + +N+ + V + H IK+ + N +K L Sbjct: 300 D--RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARL 357 Query: 248 QTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 IEE + ++ +IF TK ++I L DG + GD AQ +R +L+EF Sbjct: 358 GKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRT 417 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE- 363 G I+VATDVA+RG+ + +THVFNYD P + EDYVHRIGRTGRAGA G + + + Sbjct: 418 GKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDN 477 Query: 364 --YALNLPAIETYIGHSI 379 A L +I + I Sbjct: 478 AKQARELVSILSEAKQDI 495 >UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Clostridium RepID=A6M3F5_CLOB8 Length = 525 Score = 569 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 144/382 (37%), Positives = 225/382 (58%), Gaps = 12/382 (3%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + +F+ L +V+A+ GF + IQ ++P+TL+G D+ GQAQTGTGKT A+ Sbjct: 1 MNDNQFATLGLKESIVKAISDLGFTKPSQIQEQSIPVTLSGADLIGQAQTGTGKTAAYSL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + + ++LI+APTRELAVQ++ + + L++ + YGGD D Sbjct: 61 PIITKMSDN--------RGIKSLILAPTRELAVQVNEEIQRLSKYEKIVTLAVYGGDSID 112 Query: 126 KQLKVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 +Q++ L G VDI++GT GR++D K+ ++L +I+ +VLDEAD M ++GFI DI+ + Sbjct: 113 RQIRALRKGDVDIVVGTPGRILDLVKRKCLHLESIEFLVLDEADEMLNMGFIDDIQEILS 172 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 P ++R +LFSAT+ + +LA + M +A+ + ++ T +I++ F +N+ + Sbjct: 173 HTP--SERQTLLFSATMPDPIAKLAKKYMKPDAKLVSIKRSSLTVSKIEQSYFMINNKHR 230 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 + L L++ + P AIIF TK +E+ L + G+ V + GD+ Q RL L++F Sbjct: 231 LEALCRLLDLDNPSSAIIFCRTKRGVDELVQELQSKGYMVEGMHGDMTQAHRLTTLNKFK 290 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G L++L+ATDVAARG+ + VTHVFNYDLP D E YVHRIGRTGRA SG + SL + Sbjct: 291 EGTLNLLIATDVAARGIDVEGVTHVFNYDLPQDVESYVHRIGRTGRANKSGTAYSLVTPK 350 Query: 364 YALNLPAIETYIGHSIPVSKYN 385 L I+ SI Sbjct: 351 DFSMLKQIQNVTKSSITQKPVP 372 >UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=cellular organisms RepID=B4SPP3_STRM5 Length = 646 Score = 569 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 147/393 (37%), Positives = 217/393 (55%), Gaps = 10/393 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+ + +F+ L V++A+ G+ +PIQA +P L GRDV GQAQTGTGKT Sbjct: 1 MSQESQAQLQFAQLGLSESVMQAVTAIGYETPSPIQAATIPAMLEGRDVLGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAY 119 AF + D + +P+AL++APTRELA+Q+ + + + G ++ Y Sbjct: 61 AAFALPVLSNI-------DLQQIKPQALVLAPTRELAIQVAEAFQSYSSKIPGFRVLPVY 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y +QL L GV I++GT GR+ID+ ++ ++L ++ +VLDEAD M +GFI D+ Sbjct: 114 GGQPYGQQLSALRRGVHIVVGTPGRVIDHLDRSTLDLSELKTLVLDEADEMLRMGFIDDV 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + +++P +R LFSAT+ ++R +A + + + + + T I++ ++ S Sbjct: 174 EAVLKKLPA--KRQVALFSATMPPQIRRIAQTYLQDPVEVTIAAKTTTSANIRQRYWWVS 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ L ++E E D IIFA TK EE+ L A G + GD+ Q +R R + Sbjct: 232 GMHKLDALTRILEVEPFDAMIIFARTKAGTEELASKLQARGLAAAAINGDMQQAQRERTI 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 G LDILVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 292 AMLKEGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILF 351 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTD 392 A L IE I + + D Sbjct: 352 ATPREKGMLRQIERATRQPIEEMQLPSVEAVND 384 >UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=Comamonadaceae RepID=C5CU85_VARPS Length = 601 Score = 569 bits (1467), Expect = e-161, Method: Composition-based stats. Identities = 147/409 (35%), Positives = 222/409 (54%), Gaps = 8/409 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + L P +++A+ + G+ TPIQA A+P L G D+ G AQTGTGKT AF Sbjct: 1 MNFDELKLAPAILKAVHEHGYDTPTPIQAQAIPAVLEGHDLLGGAQTGTGKTAAFTLPML 60 Query: 69 HYLLSHPAIADRKVN-QPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 H L + + ++ RAL++ PTRELA Q+ + L + +GG G + Q Sbjct: 61 HKLSTGASATNKFGGIGIRALVLTPTRELAAQVEESVRTYGKYLELDSTVIFGGVGMNPQ 120 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L+ GVDIL+ T GRL+D +Q ++L +Q+++LDEADRM D+GFI D++ + +P Sbjct: 121 ISKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKILALVP 180 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 ++ ++LFSAT S +R+LA + N + I+V P T RI + + +K LL Sbjct: 181 --KEKQSLLFSATFSDEIRDLAATLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKALL 238 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I E + ++F TK + L +G L G+ +Q R + L F GD+ Sbjct: 239 AHIINENKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGDI 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATD+AARG+ I + HV NY++P+ EDYVHRIGRTGRAG+SG ++S C + Sbjct: 299 RALVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCMDEEGF 358 Query: 368 LPAIETYIGHSIPVSKYNPD-ALMTDLPKPLRLTR----PRTGNGPRRT 411 + IE + +IPV + +P+ + R G P R Sbjct: 359 MQEIERFTKQTIPVQFVEGFGPEEGERAEPIAMGRQTIWGGAGRPPSRD 407 >UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 Length = 478 Score = 569 bits (1467), Expect = e-161, Method: Composition-based stats. Identities = 140/396 (35%), Positives = 206/396 (52%), Gaps = 5/396 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 +F+D L ++ A+E +G+ TPIQ A+P L G D+ G AQTGTGKT AF Sbjct: 1 MQFADLKLIEPLLRAIEAEGYSAPTPIQQQAIPPILEGNDLLGCAQTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + R L++ PTRELA Q+ + GL+ + +GG G Q+ Sbjct: 61 QRLAQ---SGGPRQGGLRVLVLTPTRELAAQVAESFTTYGKNLGLRTAVVFGGVGQRPQM 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVD+L+ T GRL+D Q G + +VLDEADRM D+GFI DIR + +P Sbjct: 118 EALRRGVDVLVATPGRLLDLCSQGIAPFGRLDTLVLDEADRMLDMGFIHDIRRVLAMLPE 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSAT+ + +LA + + +EV T I + + + +K +L+ Sbjct: 178 --RRQTLLFSATMPPDILKLANSILRSPVRVEVARIATTAENIDQRVVFVERSDKRAMLE 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++++ RAI+F TKH + L+ + G+ +Q R R L F +G Sbjct: 236 HVLKDPALRRAIVFTRTKHGANRVVQQLSRARIEAVAIHGNKSQGARERALASFKQGTTS 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ I ++HV NYDLP+ E YVHRIGRT RAGASG ++S E L Sbjct: 296 VLVATDIAARGIDIDDISHVINYDLPNIPESYVHRIGRTARAGASGVALSFCDSEERAYL 355 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 IE I +P+ + P+P + + Sbjct: 356 ADIERLIQKRLPLLADPGVPVFQIDPRPAQQAQGHA 391 >UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hydrogenothermaceae RepID=B2V9H9_SULSY Length = 405 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 147/414 (35%), Positives = 222/414 (53%), Gaps = 18/414 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F D L + +++L++ G+ T IQ A+P + G+D+ QAQTGTGKT AF Sbjct: 6 KTFKDLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKTAAFGVPIV 65 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + K + +ALI+ PTRELA+Q+ + + L + + YGG Q+ Sbjct: 66 EKV-------NPKQKKVQALILVPTRELAIQVAKEIKELGKNKKVYTLAVYGGKSISHQI 118 Query: 129 KVLESGVDILI-GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L+ G D+++ GT GR+ D ++ +NL +++ VLDEADRM ++GFI DI + +P Sbjct: 119 NFLKKGSDVVVVGTPGRVRDLLERGVLNLDNVKMFVLDEADRMLEMGFIDDIEEIMSYLP 178 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 R N+LFSAT+ + +LA E +N N E I V+P++ T +IK+ ++ + +K + Sbjct: 179 ED--RQNLLFSATMPKEILDLAEEFLNENYETIRVKPDEVTVEKIKQIIYRVNPRDKFKK 236 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L ++ + ++ IIF TK +E+ L +G + GD +QKKR +L F G Sbjct: 237 LTEVLSQNEAEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGK 296 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 L ILVATDVAARGL I V V NY LP D E Y+HRIGRTGRAG G +IS+ Sbjct: 297 LKILVATDVAARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTPSEDK 356 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 L I+ +I V + K L + + R+ + RRR Sbjct: 357 QLQNIQKKTKANIEV-------INEAQEKKLSSAQKDKSSQKERSSRNQTRRRQ 403 >UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family n=23 Tax=cellular organisms RepID=Q0ST49_CLOPS Length = 528 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 143/375 (38%), Positives = 222/375 (59%), Gaps = 8/375 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + KF D L +++A++ GF + IQA ++P+ L G D+ GQAQTGTGKT AF Sbjct: 1 MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGC 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + + A K P+ALI+APTRELA+Q++ + L + L + YGG D Sbjct: 61 AIINN-----ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPID 115 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 +Q++ L++GVDI++GT GR++D ++ + L I +VLDEAD M ++GFI D+ + + Sbjct: 116 RQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKS 175 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 + R +LFSAT+ ++++LA M + ++I ++ T +I++ F + ++ Sbjct: 176 L--KTDRQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRF 233 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L +++ + P+ AIIF TK +E+ + A G+ V + GD++Q RL+ L +F Sbjct: 234 ETLCRVLDFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKE 293 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G LD LVATDVAARG+ + +VTHV NYDLP D E YVHRIGRTGRA G + SL + Sbjct: 294 GSLDFLVATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGVAYSLVTPKE 353 Query: 365 ALNLPAIETYIGHSI 379 + L I+ + I Sbjct: 354 YMMLKQIQKHTKSKI 368 >UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria RepID=Q126W4_POLSJ Length = 579 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 154/395 (38%), Positives = 221/395 (55%), Gaps = 4/395 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + L P +++A+ ++G+ TPIQA A+P LAG D+ G AQTGTGKT AF Sbjct: 1 MTFEELKLAPAILKAVLEQGYDTPTPIQAQAIPAVLAGSDLLGGAQTGTGKTAAFTLPML 60 Query: 69 HYLLSHPAIADRKV-NQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L + P + +R+ N RALIM PTRELA Q+ + L + +GG G Q Sbjct: 61 QRLSTEPRLTNRRGVNAVRALIMTPTRELAAQVEESVRTYGKYLDLTSMVMFGGVGMGAQ 120 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L GVDIL+ T GRL+D+A Q ++L +Q++VLDEADRM D+GFI DI+ + +P Sbjct: 121 IDKLRRGVDILVATPGRLLDHAGQGTLDLSQVQILVLDEADRMLDMGFIHDIKKVLALVP 180 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 ++LFSAT S +RELA + + +I+V P T RI + + +K LL Sbjct: 181 KHK--QSLLFSATFSDEIRELANGLLRDPLHIQVTPRNTTVQRITQTIHPVGRSKKKALL 238 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I E + ++F TK + HL +G L G+ +Q R + L F G + Sbjct: 239 THIINEHNWSQVLVFTRTKFGANNVAEHLTKNGIEAMALHGNKSQTARTQALQGFKDGTI 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATD+AARG+ I + HV NY++P+ EDYVHRIGRTGRAG SG ++SL C + Sbjct: 299 RALVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGNSGEAVSLVCLDEEGF 358 Query: 368 LPAIETYIGHSIP-VSKYNPDALMTDLPKPLRLTR 401 + IE + +I V +A + +PL + R Sbjct: 359 MQDIERFTKQNIEKVLVPGFEAEPGERAEPLAMGR 393 >UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Bulleidia extructa W1219 RepID=D2MPZ3_9FIRM Length = 425 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 157/414 (37%), Positives = 228/414 (55%), Gaps = 11/414 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F++F L ++++L K + +PIQ +P+ L G D+ AQTGTGKT F Sbjct: 1 MTFNEFNLRKPLLDSLAKASYKKPSPIQEKGIPILLEGSDLIACAQTGTGKTATFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + L + K + RALI+ PTRELA QI + + L+ YGG QL Sbjct: 61 NSL------SKEKNHSIRALILTPTRELATQIFENIKMFGRYMHLRACCVYGGSPAAPQL 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K + SG DILI T GRL+DY I+L I+ +VLDEADRM D+GFI D+R + +++P Sbjct: 115 KAIRSGCDILIATPGRLLDYLAHGKISLRHIEFLVLDEADRMLDMGFIADVRKIVQQIP- 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 N R+ LFSAT+ ++ELA + + N + + +E E+ T I + L Y K ++L Sbjct: 174 -NDRITALFSATMPKEIQELARDILKNPKEVRIEAEKFTASTIDQYLIYTEKSSKKKVLV 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ E + I+F TK + + +L ++ GD Q +RL L F + Sbjct: 233 NLLNTESIKKTIVFTRTKIGADRLEKYLKEKEIACLVIHGDKTQGQRLNALQRFRTNQIR 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 IL+ATDVAARG+ I ++HV N+DLP+D E+YVHRIGRTGRA G SISL C+E L Sbjct: 293 ILIATDVAARGIDIKDISHVINFDLPEDIENYVHRIGRTGRAKQEGVSISLVCKEELNLL 352 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRR--TGAPRNRRRS 420 IE+YI IP+ K N +L + K + + +T R R++++S Sbjct: 353 ANIESYIQFQIPL-KQNLYSLPLERKKKRKSSIHKTTRKKERFSNQKKRSKKKS 405 >UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Tax=cellular organisms RepID=CSHA_BACCR Length = 533 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 131/377 (34%), Positives = 211/377 (55%), Gaps = 9/377 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + L +++++E GF TPIQA +P L G+D+ GQAQTGTGKT AF Sbjct: 2 TTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + D + +++APTRELA+Q+ + + + +++ YGG ++Q+ Sbjct: 62 DKV-------DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQI 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ I++GT GR++D+ + + L ++ VVLDEAD M ++GFI+DI + +P Sbjct: 115 RALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPE 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + +LFSAT+ +R +A M ++I+V+ ++ T I++ ++K +L Sbjct: 175 TH--QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLT 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L++ + P+ AI+F TK R +E+ L G+ + GD+ Q KR+ +L +F G ++ Sbjct: 233 RLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIE 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGL I VTHV+N+D+P D E YVHRIGRTGRAG G ++ + L Sbjct: 293 VLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQL 352 Query: 369 PAIETYIGHSIPVSKYN 385 IE + Sbjct: 353 KNIERTTKRKMDRMDAP 369 >UniRef50_C9PMG6 ATP-dependent RNA helicase RhlB n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PMG6_9PAST Length = 449 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 300/416 (72%), Positives = 348/416 (83%), Gaps = 3/416 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M +L++ +FSD L+ KV+ ALE+KGF CTPIQAL+LP++LAG+D+AGQAQTGTGKT Sbjct: 26 MQNNYLSQLRFSDLPLNSKVLSALERKGFEYCTPIQALSLPISLAGKDIAGQAQTGTGKT 85 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 MAFLT+TFH+LL+H +++ +QPRALI+APTRELAVQI+ DAE L++AT LK GLAYG Sbjct: 86 MAFLTATFHHLLTHQ--SEKNTSQPRALILAPTRELAVQINNDAELLSKATNLKTGLAYG 143 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 GDGY+KQLK +E GVDILIGTTGR+IDY KQ I L IQVVVLDEADRM+DLGFIKDIR Sbjct: 144 GDGYEKQLKTIEKGVDILIGTTGRVIDYVKQGIICLDQIQVVVLDEADRMFDLGFIKDIR 203 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 +L R+ P RL MLFSATLSY+VRELAFE MN+ EY+E+EP QKTGHRIKEELFYPSN Sbjct: 204 YLLRKCPAPEARLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSN 263 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 ++KM LL TL+EEEWP+R I+FANTKHRCEEIWG+L+ADGHRVGLLTGDVAQKKRL +L Sbjct: 264 QDKMALLLTLLEEEWPERCIVFANTKHRCEEIWGYLSADGHRVGLLTGDVAQKKRLSLLK 323 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +FT GDLDILVATDVAARGLHI VTHVFNYDLPDDCEDYVHRIGRTGRAG SG SIS A Sbjct: 324 QFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDCEDYVHRIGRTGRAGESGVSISFA 383 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 CEEYA+NLPAIE YI HSIPVS+Y+ AL+ +LPKP RL R + R Sbjct: 384 CEEYAMNLPAIENYIAHSIPVSQYDAKALL-ELPKPHRLKRATHTAMRNHSKNDRT 438 >UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5LBR0_9ALVE Length = 674 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 139/414 (33%), Positives = 212/414 (51%), Gaps = 15/414 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 Q F + L +++ + + GF TPIQ P+ L+GRD+ G A+TG+GKT+AF+ Sbjct: 212 QTFDEACLPDYILKEINRAGFEKPTPIQVQGWPVALSGRDMVGIAETGSGKTLAFMIPAV 271 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ + P + +K + P LI+APTRELA+QI A+ + ++ + YGG Q Sbjct: 272 IHINAQPYL--QKGDGPIVLILAPTRELALQIKAECDRFGRSSRITNTCVYGGTQRGPQA 329 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L++GV+I I T GRLID+ + NL + +V+DEADRM D+GF +R + ++ P Sbjct: 330 RALQNGVEICIATPGRLIDFLESGTTNLKRVTYLVMDEADRMLDMGFEPQVRKIVSQIRP 389 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNN-AEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R +++SAT V+ LA + N + V H I++ + N K L Sbjct: 390 D--RQTLMWSATWPKEVQHLARDICNEEPVLVTVGRSGHACHNIQQYVEVVENNVKPERL 447 Query: 248 QTLIEEE-------WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 L++ W + +IF +TK ++I L DG + GD Q +R +L+ Sbjct: 448 LALMQAASAATGGGWTAKTLIFCDTKRGADDITRLLRRDGWPALSIHGDKKQSERDWVLN 507 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F G I++ATDVA+RGL + V +V NYD P EDYVHRIGRTGRAGASG + S Sbjct: 508 QFKTGRSAIMIATDVASRGLDVKDVKYVINYDFPGTIEDYVHRIGRTGRAGASGVAYSFF 567 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 + + + ++ P+AL T R G G G Sbjct: 568 SPDKGKLARQLVNCLR---EANQSVPEALETIAFANDRSNSGGKGRGKGNYGGK 618 >UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cellular organisms RepID=B0SEU1_LEPBA Length = 471 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 152/378 (40%), Positives = 220/378 (58%), Gaps = 4/378 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + FSD L + +A+ + G+ TPIQ A+PL L D+ G AQTGTGKT AF Sbjct: 6 ETFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCAQTGTGKTAAFALPMI 65 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L+S A + K QPR+L++ PTRELA+Q+H + T ++ + +GG G + Q Sbjct: 66 HNLISTRAKPNPK--QPRSLVLVPTRELAIQVHESFVLYGKYTQIRTAVIFGGVGQNPQA 123 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K + SG+D+LI T GRL+D QN ++L +++ VLDEADRM D+GFI DIR + +P Sbjct: 124 KAIASGLDVLIATPGRLVDLMNQNLVSLKNLEIFVLDEADRMLDMGFIHDIRKIISYLP- 182 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+ FSAT+ + +LA + I+V P T I + + Y +K LL Sbjct: 183 -KRRQNLFFSATMPPEIEKLANSILVEPIRIDVTPVSSTVELISQSVMYTELADKKNLLL 241 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L +++ + IIF TKH +I L G + ++ G+ +Q R R L++F G Sbjct: 242 HLFKDKNFKKTIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFRSGKNR 301 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 LVATD+AARG+ I +THV NY++P E YVHRIGRT RAG +G +I++A + + Sbjct: 302 ALVATDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAIAIAEADERSLI 361 Query: 369 PAIETYIGHSIPVSKYNP 386 IE IG SIPV + +P Sbjct: 362 KDIEKVIGISIPVDRDHP 379 >UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIB7_CLOPH Length = 514 Score = 566 bits (1459), Expect = e-160, Method: Composition-based stats. Identities = 153/395 (38%), Positives = 226/395 (57%), Gaps = 9/395 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F++ L +++A++++GF +PIQ +PL L GRD+ G AQTGTGKT AF Sbjct: 1 MNFNEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVLEGRDILGCAQTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + + + RALI+ PTRELA+QI+ E + T LK + YGG G Q+ Sbjct: 61 QSL------SKGEGSGVRALIITPTRELAIQIYESFECFGKYTSLKQSVIYGGVGQSLQV 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L++G+DILI T GRL D Q +I L AI++ VLDEAD+M D+GF+ DI+ + + +P Sbjct: 115 NSLKAGIDILIATPGRLNDLIGQGYITLDAIEMFVLDEADQMLDMGFLNDIKKVIKLLPK 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R +LFSAT+ + LA +NN E I++ P T I++ +++ K+ LL Sbjct: 175 T--RQTLLFSATMPKEIESLATNLLNNPEIIKISPVTSTVDSIEQSVYFVDRLNKISLLT 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +LI+E R ++F TKH + + L + + G Q R L +F G + Sbjct: 233 SLIKEHKMSRVLVFTKTKHGADRVADKLNKAKVKTQAIHGGKGQNARQTALSDFKEGKIK 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ I +++V NYD+P+ E Y+HRIGRTGRAG G++I+L + L Sbjct: 293 VLVATDIAARGIDISELSYVVNYDIPNQAEIYIHRIGRTGRAGLGGNAINLCNIDDMDYL 352 Query: 369 PAIETYIGHSIP-VSKYNPDALMTDLPKPLRLTRP 402 IE +IG IP V P ++ KP+R RP Sbjct: 353 REIEKHIGMVIPEVPSKWPMLILEKTEKPVRGQRP 387 >UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Alphaproteobacteria RepID=A5G1U8_ACICJ Length = 525 Score = 565 bits (1458), Expect = e-160, Method: Composition-based stats. Identities = 159/413 (38%), Positives = 229/413 (55%), Gaps = 15/413 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+ L ++ A+ ++ + TPIQA ++P+ L G D+ G AQTGTGKT AF+ Sbjct: 57 TDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPIL 116 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H + ++ A + RAL++APTRELA QI A + T + + GG Q Sbjct: 117 HRIAANRARPAPRAC--RALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQA 174 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + +ESGVD+L+ T GRL+D+ I L A++ VVLDEAD+M DLGFI IR + ++P Sbjct: 175 RRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLP- 233 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 QR ++FSAT+ +R LA E + + + V E K RI +++ + EEK L Sbjct: 234 -RQRQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLLLAPEEKKDKLA 292 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ + +RAI+F TKH +++ HL G + G+ +Q +R R LD+F G + Sbjct: 293 WLLADVAVERAIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIR 352 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ + V+HV N++LP+ E YVHRIGRT RAGA G +ISL L Sbjct: 353 VLVATDIAARGIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPYL 412 Query: 369 PAIETYIGHSI------PVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 IET IG + PV P L+ R R G P+R G P+ Sbjct: 413 RDIETLIGRHLVPGGAQPVRGLAPPHLL-----RARNQVARQGQMPKRNGPPK 460 >UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D673_LARHH Length = 582 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 155/414 (37%), Positives = 225/414 (54%), Gaps = 4/414 (0%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ F+D L ++ A+ + G+ TPIQ A+ LAGRD+ AQTGTGKT F Sbjct: 1 MSSISFADLQLVDPLLRAITEAGYTEPTPIQREAIAPVLAGRDLMAAAQTGTGKTAGFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L + +PR L++ PTRELA Q+ L L + +GG Sbjct: 61 PLLQRLAATHPHPH-PAGRPRGLVLTPTRELAAQVGESIATLGTHLPLTSLVIFGGVRVK 119 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L VDILI T GRLID AKQ ++L ++++VLDEADRM D+GFI+D+R + + Sbjct: 120 PQIEALTQRVDILIATPGRLIDLAKQEAVDLSGVEILVLDEADRMLDMGFIRDVRKVLKL 179 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P +R N+LFSAT + ++ LA +++ + +EV P T + + K Sbjct: 180 LPA--ERQNLLFSATFNDDIKALADTFLHDPQLVEVSPPNSTTELVTHHVHLVDRNRKRE 237 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL L+E + ++F TKH + LA G + G+ +Q R R L EF G Sbjct: 238 LLTHLVESRQWQQVLVFTRTKHGANRLAEVLAKGGIPAAAIHGNKSQGARTRALSEFKDG 297 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 L +LVATD+AARG+ I + V NY+LP+ EDYVHRIGRTGRAG+ G ++SL C + Sbjct: 298 SLRVLVATDIAARGIDISELPQVVNYELPNVPEDYVHRIGRTGRAGSPGEAVSLVCVDEL 357 Query: 366 LNLPAIETYIGHSIP-VSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 L IE +IG IP ++ +A ++ P+PL R + G G PR +R Sbjct: 358 KLLADIEAFIGRPIPQFTEPGFEADLSVPPQPLLPPRHQQGRQDGEGGEPRGQR 411 >UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=Alphaproteobacteria RepID=B8ILJ8_METNO Length = 506 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 146/412 (35%), Positives = 215/412 (52%), Gaps = 6/412 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 +F DF L +++AL + G+ TPIQA A+P + GRD+ G AQTGTGKT AF Sbjct: 2 TQFVDFGLAAPIMKALAETGYVTPTPIQAQAVPPAMTGRDLCGIAQTGTGKTAAFALPIL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L S R L+++PTRELA QI + + +GG +Q Sbjct: 62 HRLASETPAKRAPRRGCRVLVLSPTRELASQIADSFRDYGKFLPFSTTVVFGGVTIGRQE 121 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L +G+D+L+ T GRL+D + ++L +++ +VLDEAD+M DLGFI ++ + +P Sbjct: 122 RALANGIDVLVATPGRLLDLVDRRSLSLDSVEYLVLDEADQMLDLGFIHALKRIVTLLPK 181 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 A R ++ FSAT+ + LA + + + + V P T R+++ + + S K LL Sbjct: 182 A--RQSLFFSATMPKNIATLAAQYLRDPVQVAVTPVATTAERVEQRVIHVSTGAKQALLG 239 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 T++ +E DR ++F TKH + + L G + G+ +Q +R R L F G Sbjct: 240 TILRDESIDRVLVFTRTKHGADRVVRGLEKVGIGSAAIHGNKSQPQRERALAAFRAGTCR 299 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ + VTHV N+DLP+ E YVHRIGRT RAGA G +IS EE L Sbjct: 300 VLVATDIAARGIDVEGVTHVVNFDLPNVPEAYVHRIGRTARAGADGLAISFCNEEERAYL 359 Query: 369 PAIETYIGHSIPVS----KYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 IE +P + P + R R GPR R+ Sbjct: 360 RDIERLTRQKVPEMAIPVGFVPPSRQEAAEAVAEAERDRRQPGPRGQRPGRS 411 >UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBN1_9CLOT Length = 526 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 141/375 (37%), Positives = 224/375 (59%), Gaps = 11/375 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + E KFS+ L +++++ GF + IQA A+P+ + G D+ GQAQTGTGKT AF Sbjct: 1 MNEIKFSNLGLKDTLLKSINDLGFEKPSQIQAEAIPVAIQGYDLIGQAQTGTGKTAAFGC 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 +++ ++ A+I+APTRELA+Q++ + + L++ L + YGGD Sbjct: 61 GIINHISKKSGLS--------AIILAPTRELAIQVNDELKRLSKYDDLTILPVYGGDPIT 112 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L+ V+I++GT GR++D+ K+ I L I+ +VLDEAD M ++GFI D+ + ++ Sbjct: 113 NQIRALKRNVNIVVGTPGRVLDHIKRGTIKLDQIKFLVLDEADEMLNMGFIDDLEDIIKQ 172 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P ++R +LFSAT+ ++R+LA M +A++I ++ T I + F S++ + Sbjct: 173 LP--SERQTLLFSATMPDQIRKLAKRYMKPDAKHISIKKTSMTVSTISQNFFEVSHKTRF 230 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L +++ + P AIIF TK +E+ + + G+ V + GD++Q RLR L +F Sbjct: 231 EALCRVLDFDTPSSAIIFCRTKKGVDELVEGMQSRGYVVEGMHGDMSQAHRLRTLKKFKE 290 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G L+ LVATDVAARG+ + +THV NYDLP D E YVHRIGRTGRA G + SL + Sbjct: 291 GSLNYLVATDVAARGIDVEGITHVINYDLPQDVESYVHRIGRTGRANREGIAYSLVSPKE 350 Query: 365 ALNLPAIETYIGHSI 379 L I++ I Sbjct: 351 YSMLKQIKSVTKSDI 365 >UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Proteobacteria RepID=C6E4K1_GEOSM Length = 490 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 201/413 (48%), Positives = 266/413 (64%), Gaps = 4/413 (0%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF++ + +V + +++ GF CTPIQ ALPL L G+DVAGQAQTGTGKT FL S F Sbjct: 1 MKFTELKIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIF 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LLS + PRALI+APTREL VQI DA+ L + TG + YGG Y KQ Sbjct: 61 TKLLSQAKTGGE--HHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQR 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L++G DI+IGT GRLIDY KQ ++ ++ +V+DEADRM+D+GFI D+R++ RR+PP Sbjct: 119 DALKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPP 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 ++R N+LFSATL+ RV ELA+E MN E + V PEQ T R+++ L++ S +EK LL Sbjct: 179 YDKRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLL 238 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ + +R +IF NTK E + L A+ +++GDV Q+KR++IL +F G L Sbjct: 239 GLLRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLP 298 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 I++ATDVA+RG+HI V+HV NYDLP DCEDYVHRIGRT RAGA G +IS A E+ A + Sbjct: 299 IMIATDVASRGIHIEGVSHVINYDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYI 358 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 IE +I IP D + D RPRT R G P +R RSG Sbjct: 359 EPIEDFIKQKIPTEWAEDDMFVHDY--KRTKPRPRTELPHGRGGKPGDRGRSG 409 >UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=Bacteria RepID=C6XMJ7_HIRBI Length = 769 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 150/387 (38%), Positives = 222/387 (57%), Gaps = 5/387 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KFSDF L V++AL+K+G+ TPIQA A+PL + G D+ G AQTGTGKT AF Sbjct: 2 TKFSDFDLASPVLKALDKEGYETPTPIQAQAIPLVMEGGDILGIAQTGTGKTAAFALPLL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H+L P + R L++APTRELA QI + L++ +GG KQ+ Sbjct: 62 HHLCKLPDMPGP--GAVRCLVIAPTRELASQIAEAFSKYGQCLSLRVLKVFGGVPIRKQM 119 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L G D+L+ T GRLID +Q ++L ++ +VLDEAD+M DLGFI +R + +P Sbjct: 120 RDLHRGADVLVATPGRLIDLMEQGAVDLSYVEKLVLDEADQMLDLGFIHPLRRIAAAVP- 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R + FSAT+ V LA + + N + + + E T R+ + + + + +K LL Sbjct: 179 -KERQTLFFSATMPSNVSGLANQFLTNPKKVSIAQESTTAERVTQTMSHVNQAQKGPLLL 237 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++E DRA++F TKH +++ L G R G + G+ +Q +R R L+ F GD Sbjct: 238 VNLQDESIDRALVFTRTKHGADKVVSKLMNAGIRCGAIHGNKSQAQRERALNAFRNGDSK 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ +P V+HVFNY++P+ E YVHRIGRT RAG G +IS + L Sbjct: 298 VLVATDIAARGIDVPGVSHVFNYEIPNVPEQYVHRIGRTARAGREGKAISFVSRDEKKYL 357 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPK 395 I+ I IP+ P+ + + Sbjct: 358 LDIQRQIRMKIPIVDL-PEGFIDQAEE 383 >UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VX00_DYAFD Length = 590 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 143/378 (37%), Positives = 216/378 (57%), Gaps = 10/378 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T T Q F + L+ +++AL++ GF +PIQA +P L G DV GQAQTGTGKT AF Sbjct: 2 TTETFQTFEELGLNENILKALQEMGFEKPSPIQAQGIPAVLQGSDVIGQAQTGTGKTAAF 61 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGD 122 + D N +ALI+ PTRELAVQ+ + L++ G+++ YGGD Sbjct: 62 GIPVLERI-------DTSSNAVQALILCPTRELAVQVSEELGRLSKFMRGVRIEAIYGGD 114 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 D+Q++ L+ GV I++GT GR++D+ ++ + ++++VLDEAD M D+GF +DI + Sbjct: 115 SIDRQIRSLKKGVHIVVGTPGRVMDHMERRTLKFDEVRMMVLDEADEMLDMGFREDIESI 174 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 MP R +LFSAT+S + + +N+ I+V + T I++ F + Sbjct: 175 LADMPED--RQTILFSATMSKPIMSITKRFLNDPTLIKVVRNELTNQNIEQVYFEVKPQA 232 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K+ ++ LI+ ++F NTK + +EI L G+ + GD+ Q++R ++ +F Sbjct: 233 KVEVMTRLIDMHHIKSLLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKF 292 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G ILVATDVAARG+ + + V NYD+P D E YVHRIGRTGRAG SG + SL Sbjct: 293 KAGVTTILVATDVAARGIDVSGLDGVINYDIPMDEEYYVHRIGRTGRAGMSGKAFSLVAR 352 Query: 363 EYALNLPAIETYIGHSIP 380 + L +IE+Y I Sbjct: 353 DEKYRLKSIESYTKVKIE 370 >UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKI7_9FIRM Length = 580 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 128/377 (33%), Positives = 209/377 (55%), Gaps = 9/377 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F+DF L +V++A+ + GF +PIQ A+P L D+ GQAQTGTGKT +F Sbjct: 3 ENFNDFNLSKEVLKAVVEMGFEEPSPIQKQAIPTMLNNEDIIGQAQTGTGKTASFGIPIV 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + ++ +A+++ PTREL++Q+ + LA+ G+ + YGG ++Q+ Sbjct: 63 EKV-------NKNSKTTQAMVLCPTRELSIQVAEEISKLAKYKGVTVVPIYGGQPIERQI 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ GV +++GT GR+ID+ K+ + I+ VLDEAD M+D+GF +DI + +P Sbjct: 116 RSLKMGVQVIVGTPGRVIDHIKRKTLKTENIKTFVLDEADEMFDMGFREDIEKIIGFLPY 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R FSAT+ + + + A + I+V P++ T ++ + F + K+ +L Sbjct: 176 --ERQTTFFSATMDHEMMDFAARYQSEPRLIKVVPKELTVPKVTQYYFALKHNMKLEILS 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ + P ++F NTK +++ L + G+ L GD+ Q +R ++++F +D Sbjct: 234 RILDVQNPKLTVVFCNTKKMVDDLTAGLQSRGYFADGLHGDLKQIQRDGVMNKFRNSTID 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARG+ + V V NYD+P D E YVHRIGRT RAG G +IS L Sbjct: 294 ILVATDVAARGIDVDDVDLVINYDMPQDVEYYVHRIGRTARAGREGTAISFVSPREMNTL 353 Query: 369 PAIETYIGHSIPVSKYN 385 I+ Y I Sbjct: 354 SQIQKYTKTKIEKRDMP 370 >UniRef50_Q8MZI3 CG10077, isoform A n=15 Tax=Eukaryota RepID=Q8MZI3_DROME Length = 818 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 11/377 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 +F + V+ + K+GF T IQA P+ ++GRD+ G AQTG+GKT+A++ Sbjct: 158 EFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVV 217 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 ++ + P + + + P AL++APTRELA QI A T ++ +GG +Q + Sbjct: 218 HINNQPRL--ERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQAR 275 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE GV+I+I T GRLID+ ++ +L +VLDEADRM D+GF IR + +++ P Sbjct: 276 DLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPD 335 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSNEEKMRLLQ 248 R +++SAT VR+LA E +NN + + H I + + EK+ L Sbjct: 336 --RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLI 393 Query: 249 TLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ + E + IIF TK R +EI +++ G R + GD +Q++R +L F G Sbjct: 394 KLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNG 453 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY- 364 ILVATDVAARGL + V V NYD P + EDYVHRIGRTGR+ +G + +L Sbjct: 454 RHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNA 513 Query: 365 --ALNLPAIETYIGHSI 379 A +L + +I Sbjct: 514 NKANDLIQVLREANQTI 530 >UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW85_METML Length = 576 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 144/413 (34%), Positives = 225/413 (54%), Gaps = 10/413 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L+P ++ A+E+ G+ TPIQA A+P+ + G D+ AQTGTGKT F+ Sbjct: 1 MSFESLNLNPAILRAIEETGYTTPTPIQAQAIPVVMEGHDLMASAQTGTGKTAGFMLPAL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + L + + + PR L++ PTRELA Q++ A + + GG Y Q Sbjct: 61 NLLAT---PHESRSRGPRILVLTPTRELAAQVNEAARKYGKFLRARTVSIVGGMPYPLQN 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K+L +DIL+ T GRL+D+ ++ I+L +Q+++LDEADRM D+GF+ D+ + ++ Sbjct: 118 KLLSQPLDILVATPGRLLDHMERGRIDLSRLQMLILDEADRMLDMGFLPDVERICEQL-- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLL 247 + +R +LFSATL + +A + + N + ++V +++ I++ L + + K +LL Sbjct: 176 SAERQTLLFSATLDGDIARIAQQILKNPKTVQVAAQKEKHANIEQRLHFVDDMTHKNKLL 235 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + L+ ++ IIF +TK + + L A GH+ L GD+ Q R R L + GD+ Sbjct: 236 EHLLIAPEVNQTIIFTSTKRHADVLAEDLYAAGHKTAALHGDMTQGARNRTLTKLRHGDV 295 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVAARG+ + +THV NYDLP EDYVHRIGRTGRA +G +IS A Sbjct: 296 KVLVATDVAARGIDVHGITHVINYDLPKFAEDYVHRIGRTGRANNTGIAISFASNMDRHL 355 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 L IE Y G+ + S +P+++ P G R +S Sbjct: 356 LRKIEQYTGNRLEASVIEGFEPK----RPVKMDGPSGGRRDGHKAGGRGGFKS 404 >UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Clostridia RepID=C5RIK3_CLOCL Length = 536 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 139/378 (36%), Positives = 217/378 (57%), Gaps = 10/378 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F++ L ++++A+ GF +PIQ+ ++P+ + G D+ GQAQTGTGKT AF + Sbjct: 5 KTFNELNLKDEILKAINDMGFEEPSPIQSESIPVGIEGYDLIGQAQTGTGKTAAFGSIIL 64 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + K P+ALI+APTRELA+Q++ + +A+ L + YGG D+QL Sbjct: 65 NNM-------SEKRRVPQALILAPTRELAIQVNEELVRIAKNMRLNILPIYGGQPIDRQL 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L +GVDI++GT GR++D+ ++ +N ++ +VLDEAD M ++GFI DI + + + Sbjct: 118 RALRNGVDIVVGTPGRVLDHLRRKSLNTEFVKFLVLDEADEMLNMGFIDDIEEVMKSL-- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R +LFSAT+ ++ L+ M +A+ I +E T I + + N ++ L Sbjct: 176 NEDRQTLLFSATMPDAIKRLSKRYMKSDAKLISIEKNTVTASTITQYYYEIKNSDRFESL 235 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I+ + P+ AIIF TK +E+ + G+ V + GD+ Q +R+ L +F +L Sbjct: 236 CRIIDADEPEAAIIFCKTKKGVDELVSSMQRRGYVVEGMHGDMNQNQRMNTLKKFKESNL 295 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 D LVATDVAARG+ + VTHV NYDLP D E YVHRIGRTGRA G + +L + Sbjct: 296 DFLVATDVAARGIDVENVTHVINYDLPQDAESYVHRIGRTGRANKEGKAYTLVTPREYIV 355 Query: 368 LPAIETYIGHSIPVSKYN 385 L IE I + Sbjct: 356 LKQIEKTTKSKIKRNSVP 373 >UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular organisms RepID=B1VFV5_CORU7 Length = 778 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 149/398 (37%), Positives = 218/398 (54%), Gaps = 11/398 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F D L P+V +A+ GF +PIQ +PL +AG DV G AQTGTGKT AF Sbjct: 132 GFGDLGLSPEVFDAVRAVGFTKPSPIQEQTIPLLMAGEDVVGLAQTGTGKTAAFALPILS 191 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQL 128 L + K +P+AL++APTRELA+Q+ E AE G + + YGG Y QL Sbjct: 192 RL-------NLKSRKPQALVLAPTRELALQVAESFEDFAEKMGGVNILPIYGGQPYGAQL 244 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L G +++GT GR+ID+ ++ +++ ++ +VLDEAD M ++GF +D+ + P Sbjct: 245 SGLRRGAHVVVGTPGRVIDHLQKGSLDISELRFMVLDEADEMLNMGFQEDVERILEDTPE 304 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 LFSAT+ +R L+ +N+ + + V+ Q+T I+++ + EK+ L Sbjct: 305 DK--QVALFSATMPSAIRHLSKRYLNSPQEVTVKSTQRTAENIEQDYLIVHHREKLDALT 362 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E D I+F TK+ EE+ L A G+ + GD+AQ +R R +D+ G LD Sbjct: 363 RILEVTDFDAMIMFVRTKNDTEELAERLRARGYEAAAINGDIAQAQRERTVDQLKDGRLD 422 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL + +THVFNYD+P D E YVHRIGRTGRAG SG ++ L Sbjct: 423 ILVATDVAARGLDVERITHVFNYDIPRDTESYVHRIGRTGRAGRSGRAVLFVTPRERRML 482 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGN 406 +IE + + P + + + R T N Sbjct: 483 KSIERATKSRLNEIEL-PSVDQVNEARKAKFNRELTKN 519 >UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteobacteria RepID=C4XQY7_DESMR Length = 496 Score = 562 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 152/418 (36%), Positives = 228/418 (54%), Gaps = 12/418 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F LH ++ +++ G+ TPIQA A+P + G D+ G AQTGTGKT AFL Sbjct: 1 MSFDSFCLHDSLIANIKRAGYETPTPIQAEAVPHVMEGHDLMGLAQTGTGKTAAFLLPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L+++PA + PR LI+APTRELA QI T L+ + YGG G Q+ Sbjct: 61 HRLITNPA----RTRSPRTLILAPTRELAEQIFRSTLDFMRGTRLRATVIYGGVGMFPQV 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVD+++ GRL+D+ Q ++ ++ +VLDEAD M+D+GF+ DI+ + +P Sbjct: 117 RALRQGVDVIVACPGRLLDHLNQGNVRFDGLETLVLDEADHMFDMGFLPDIKRILAALPA 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSAT+ + LA E + + + + ++ ++ S+ +K LL Sbjct: 177 --KRQTLLFSATMPPAISGLAAETLTDPVTVRIGH-LAPLSTVEHAIYPVSHNQKAPLLL 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ E + I+F TKHR + + L GH+ L G+++Q++R +D F RG Sbjct: 234 HLLGEAGKESVIVFTRTKHRAKNLAQQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQ 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARG+ + V HV N+D+PD E Y HRIGRTGRA G + + E + Sbjct: 294 ILVATDIAARGIDVSQVAHVVNFDIPDTAEAYTHRIGRTGRAERDGQAHTFVTGEDMGMV 353 Query: 369 PAIETYIGHSIP---VSKYNPDA--LMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 AIE+++ +P V + P+ P P RPR G G R G +R+R G Sbjct: 354 RAIESHMKKPLPRRNVEGFEPEPGEFRRSAPAPRSAARPRQGYGAPRQGGYGDRQRQG 411 >UniRef50_Q5CQW8 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc) n=4 Tax=Apicomplexa RepID=Q5CQW8_CRYPV Length = 702 Score = 562 bits (1450), Expect = e-159, Method: Composition-based stats. Identities = 140/434 (32%), Positives = 222/434 (51%), Gaps = 20/434 (4%) Query: 1 MSKTHLTE----QKFSDF-ALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQT 55 M+ + + Q F + +H +++ + + + TP+Q ++P L GRD+ AQT Sbjct: 188 MTGSDTNKIKPMQSFMELEGIHEILLDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQT 247 Query: 56 GTGKTMAFLTSTFHYLL--------SHPAIADRKVNQPRALIMAPTRELAVQIHADAEPL 107 G+GKT AFL +L ++ +++ P AL+++PTRELA+Q + ++ Sbjct: 248 GSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRKF 307 Query: 108 AEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEA 167 TG++ + YGG Q+ L+ G DI++ T GRL D + +NL I+ ++LDEA Sbjct: 308 CFGTGIRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEA 367 Query: 168 DRMYDLGFIKDIRWLF--RRMPPANQ-RLNMLFSATLSYRVRELAFEQMNNAEYIEVEPE 224 DRM D+GF IR + MP + R ++FSAT +++LA + ++N ++ V Sbjct: 368 DRMLDMGFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGRV 427 Query: 225 QKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVG 284 T I + + Y + K RLL L+ E+ ++F K R ++I L Sbjct: 428 GATSGSIVQRVVYAEEDHKPRLLVKLLLEQGEGLTVVFVEMKRRADQIEDFLIDQNFPAV 487 Query: 285 LLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRI 344 + GD +Q++R L F G ILVATDVAARGL IP +THV N D+P + +DYVHRI Sbjct: 488 SIHGDRSQQEREHALRLFRSGQRPILVATDVAARGLDIPNITHVINLDMPCNIDDYVHRI 547 Query: 345 GRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 GRTGRAG +G + S E L + ++ S + D+ K + R Sbjct: 548 GRTGRAGNTGLATSFVNESNKPILRDLL----AALEESGQDAPEWFQDMVKSCTASFGRY 603 Query: 405 GNGPRRTGAPRNRR 418 GN + G ++R Sbjct: 604 GNRFNKGGVSSSQR 617 >UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein n=7 Tax=cellular organisms RepID=C5EJJ1_9FIRM Length = 572 Score = 562 bits (1450), Expect = e-159, Method: Composition-based stats. Identities = 135/375 (36%), Positives = 217/375 (57%), Gaps = 10/375 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + KF + L +++ A+ + GF +PIQA A+P+ + GRD+ GQAQTGTGKT AF Sbjct: 1 METVKFDELQLDERIIRAITEMGFEEASPIQAQAIPVAMEGRDMIGQAQTGTGKTAAFGI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGY 124 + D KV + +A+I+ PTRELA+Q+ + LA+ G K+ YGG Sbjct: 61 PLLQKV-------DPKVKKLQAIILLPTRELAIQVAEEMRRLAKFMHGTKVLPIYGGQDI 113 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 KQ++ L+ G I++GT GR++D+ ++ + + + VVLDEAD M ++GF++D+ + Sbjct: 114 VKQIRSLKDGTQIVVGTPGRVMDHMRRKTVKMDHVHTVVLDEADEMLNMGFLEDMETILS 173 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 ++P +R ++FSAT+ + ++A + ++ + V ++ T ++ + + + K+ Sbjct: 174 QLPE--ERQTLMFSATMPQAIADIARKFQDDPVTVRVIKKELTVPKVTQYYYEVKPKNKV 231 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 ++ L++ P +I+F NTK + +E+ L G+ L GD+ Q +R R++ F Sbjct: 232 EVMCRLLDMYAPKLSIVFCNTKRQVDELVQALQGRGYFAEGLHGDLKQVQRDRVMGSFRN 291 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G DILVATDVAARG+ + V VFNYD+P D E YVHRIGRTGRAG G + SL + Sbjct: 292 GRTDILVATDVAARGIDVGDVEAVFNYDVPQDDEYYVHRIGRTGRAGREGKAFSLVVGKE 351 Query: 365 ALNLPAIETYIGHSI 379 L I+ Y I Sbjct: 352 VYKLRDIQRYCKTKI 366 >UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RPH4_FIBSS Length = 486 Score = 562 bits (1450), Expect = e-159, Method: Composition-based stats. Identities = 149/420 (35%), Positives = 212/420 (50%), Gaps = 11/420 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF + L + A+ G+ TPIQ ++P L G+D+ G AQTGTGKT AF Sbjct: 1 MKFEELPLANPLQRAVRAVGYETPTPIQERSIPSLLEGKDLLGIAQTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LL R RALI+ PTRELA+Q+ A+ T + +GG + Q Sbjct: 61 QRLLDSGKF--RSPKTCRALILLPTRELAIQVEDCFREYAQFTAISTACIFGGVNDNPQK 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVD+L+ T GRL+D Q I+L ++ VLDEADRM D+GFI DIR + +P Sbjct: 119 QKLIRGVDVLVATPGRLLDLIGQKAISLKKLEFFVLDEADRMLDMGFIHDIRKVVAMLPQ 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R N+ FSAT+ + +LA + N +EV P+ RI++EL+ K LL Sbjct: 179 D--RQNLFFSATMPEEISKLAATILRPNPVRVEVAPQSTPIERIRQELYRIDKRRKGALL 236 Query: 248 QTLI-EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 + L+ E + ++F TKH ++I L G + + G+ +Q +R L F Sbjct: 237 KELLAEHPEMKKVLVFCRTKHGADKIVRVLEKAGIKCAAIHGNKSQNRRQEALGNFKCEQ 296 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + +LVATD+AARG+ + V+HVFNYDLP++ E +VHRIGRT RAG G +IS + Sbjct: 297 IRVLVATDIAARGIDVDDVSHVFNYDLPNEHETFVHRIGRTARAGKEGVAISFCSPDEES 356 Query: 367 NLPAIETYIGHSIPVSKYN-----PDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 +L IE IP + P +R +R R + A R G Sbjct: 357 DLRGIEKLTRVKIPEGDQSIYENLPPPQKETAESMMRNSRGRMSREEAQARAAETRNNRG 416 >UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SI45_9CAUL Length = 605 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 165/426 (38%), Positives = 229/426 (53%), Gaps = 19/426 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F D L ++ LEK+G+H TPIQA A+P+ L D+ G AQTGTGKT AF Sbjct: 2 TTFKDLGLSASLLSTLEKEGYHTPTPIQAQAIPILLNKHDLLGIAQTGTGKTAAFALPIL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H++LS+ I + R L+++PTRELA QI + ++ GL++ +GG Y Q Sbjct: 62 HHILSNRIIPAPRSC--RVLVLSPTRELATQIADSFKAYSKGLGLQIATIFGGVKYGPQY 119 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L+ G+DIL+ T GRLID+ +Q I+L A++ +VLDEAD+M D+GFIK IR + R+P Sbjct: 120 KALQGGIDILVATPGRLIDHIEQKTIDLKAVEHLVLDEADQMLDMGFIKPIRQVASRLPA 179 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 QR N+ FSAT+ + LA E + N + +E+ PE T R+ +++ + + K LL Sbjct: 180 --QRQNLFFSATMPKEIAGLANELLTNPKKVEITPEATTAERVTQQVIFIEQQRKRALLS 237 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L +E R +IF TK + + +L A G + GD Q +R R L F G + Sbjct: 238 ELYADEKLARTLIFTRTKRGADRVAAYLQAGGVEAAAIHGDKNQSQRERALQAFKAGRVR 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 LVATD+AARG+ + VTHV NY+LP E YVHRIGRT RAG GHSI+L ++ L Sbjct: 298 ALVATDIAARGIDVDNVTHVINYELPFVAEAYVHRIGRTARAGKEGHSITLVADDERKLL 357 Query: 369 PAIETYIGHSIPVSKYNPDALMTDL----------PKPLRLTR-----PRTGNGPRRTGA 413 IE IP D + L KP R R + Sbjct: 358 KDIERITRQRIPSWDRRKDQALKLLDEAILASGQTEKPKTPDRVVEKTARHLDPDAERVH 417 Query: 414 PRNRRR 419 R+R R Sbjct: 418 KRSRNR 423 >UniRef50_O00571 ATP-dependent RNA helicase DDX3X n=262 Tax=cellular organisms RepID=DDX3X_HUMAN Length = 662 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 129/389 (33%), Positives = 196/389 (50%), Gaps = 17/389 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + FSD + ++ +E + TP+Q A+P+ RD+ AQTG+GKT AFL Sbjct: 180 ESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPIL 239 Query: 69 HYL-----------LSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGL 117 + + R+ P +L++APTRELAVQI+ +A + + ++ + Sbjct: 240 SQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCV 299 Query: 118 AYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIK 177 YGG +Q++ LE G +L+ T GRL+D ++ I L + +VLDEADRM D+GF Sbjct: 300 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEP 359 Query: 178 DIRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEEL 235 IR + + MPP R M+FSAT ++ LA + ++ ++ V T I +++ Sbjct: 360 QIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV 419 Query: 236 FYPSNEEKMRLLQTLIEEEWPDR-AIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKK 294 + +K L L+ D ++F TK + + L +G+ + GD +Q+ Sbjct: 420 VWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRD 479 Query: 295 RLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG 354 R L +F G ILVAT VAARGL I V HV N+DLP D E+YVHRIGRTGR G G Sbjct: 480 REEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLG 539 Query: 355 HSISLACEEYALNLPAIETYI---GHSIP 380 + S E + + +P Sbjct: 540 LATSFFNERNINITKDLLDLLVEAKQEVP 568 >UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 Tax=Firmicutes RepID=CSHA_BACLD Length = 487 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 141/395 (35%), Positives = 221/395 (55%), Gaps = 9/395 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F DF L + +A+++ GF TPIQA +PL LA +DV GQAQTGTGKT AF Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + + + +A+++APTRELA+Q+ + + + ++ YGG +Q++ Sbjct: 64 KI-------NPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIR 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ I++GT GRL+D+ + + L + VVLDEAD M ++GFI+DI + +P Sbjct: 117 ALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAE 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 + +LFSAT+ ++ +A M N E+++V+ ++ T I++ +K L Sbjct: 177 H--QTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTR 234 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L++ + P+ AI+F TK R +E+ L G+ + GD+ Q KR+ L +F +G +++ Sbjct: 235 LLDIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEV 294 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL I VTHV+N+D+P D E YVHRIGRTGRAG +G +++ L Sbjct: 295 LVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLR 354 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 AIE + K + + + + R RT Sbjct: 355 AIEQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIRT 389 >UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Euryarchaeota RepID=A6VJ89_METM7 Length = 546 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 141/378 (37%), Positives = 213/378 (56%), Gaps = 10/378 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAG-RDVAGQAQTGTGKTMAFLTST 67 + F + L ++++ALEKKGF N TPIQ A+P+ + G RDV GQAQTGTGKT AF Sbjct: 2 ESFKNLGLSDEIIKALEKKGFTNPTPIQEQAIPILIEGKRDVVGQAQTGTGKTAAFGIPI 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + D +ALI+APTRELA+Q+ + + + + L + YGG D+Q Sbjct: 62 LETI-------DESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L+ GV I++GT GR++D+ + I L + VVLDEAD M ++GFI D+ + + + Sbjct: 115 IRELKRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSV- 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 + ++ +LFSATL + +LA M + I+V+ +Q T + + + +K LL Sbjct: 174 -STEKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSYYEIHSRDKFELL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I+ E +IF TK +EI L G+ L GD+ Q +R + LD+F + Sbjct: 233 SRIIDVEKEFYGLIFCKTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLDKFKARKI 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ++LVATDVAARG+ I +THV NYD+P + E YVHRIGRTGRAG G++++ Sbjct: 293 NVLVATDVAARGIDINDLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRK 352 Query: 368 LPAIETYIGHSIPVSKYN 385 I+ I + Sbjct: 353 FKYIQKIANTEIRKEEVP 370 >UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9A4_DESAH Length = 616 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 149/393 (37%), Positives = 215/393 (54%), Gaps = 10/393 (2%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 ++ +E FS+ L V++AL+ G+ T IQA +P LAGRD+ GQAQTGTGKT Sbjct: 12 NEPGFSESGFSEMGLIKPVLKALDDLGYETPTTIQAETIPYILAGRDLLGQAQTGTGKTA 71 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYG 120 AF + D K+ +P+ L++APTRELA+Q+ + A G + YG Sbjct: 72 AFALPLLSRI-------DIKLKKPQVLVLAPTRELAIQVAESFKGYAARIKGFNVLPVYG 124 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Y QL L+ GV +++GT GRL+D K+ ++L I +V+DEAD M +GFI D+ Sbjct: 125 GQAYAGQLNQLKRGVHVIVGTPGRLMDLMKRGVLDLTQIMTLVIDEADEMLRMGFIDDVE 184 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 W+ + PP R LFSAT+ ++++A + + + + + + T I++ + Sbjct: 185 WILEQTPPG--RQVALFSATMPAPIKKIAIKYLTDPKDVFIRLRTATADTIRQRFWMVKG 242 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 K+ L ++E E D I+F TK E+ L A G+ L GD+AQK R R +D Sbjct: 243 THKLDALTRILEAETFDAIIVFVRTKTATVELAEKLEARGYAAVALNGDIAQKARERTID 302 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F +G +DILVATDVAARGL + V+HV NYD+P+ E YVHRIGRTGRAG +G +I Sbjct: 303 RFKKGKIDILVATDVAARGLDVERVSHVINYDIPNGAESYVHRIGRTGRAGRAGDAILFV 362 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDL 393 L IE I + K + D Sbjct: 363 SPRERWMLKVIEKTTRQQIEMMKLPSTEAINDK 395 >UniRef50_Q88NB7 ATP-dependent RNA helicase rhlB n=50 Tax=Gammaproteobacteria RepID=RHLB_PSEPK Length = 398 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 176/397 (44%), Positives = 243/397 (61%), Gaps = 2/397 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M + + +F DF L +++ A+ GF CTPIQA L TL G+D G+AQTGTGKT Sbjct: 1 MVEPQEGKTRFHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AFL S L P +R + +PRALI+APTREL VQI DA L + TGL + G Sbjct: 61 AAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVG 120 Query: 121 GDGYDKQLKVLE-SGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 G +DKQLK LE DIL+ T GRL+D+ ++ ++L ++V+VLDEADRM D+GFI + Sbjct: 121 GMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQV 180 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R + R+ PP ++R +LFSAT + V LA + N +E+EPE +++ ++ + Sbjct: 181 RQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVA 240 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K +LL L+ + +R ++FAN K I L DG L+GDV Q KR+R L Sbjct: 241 GSDKYKLLYNLVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTL 300 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F G + +LVATDVA RG+HI ++HV N+ LP+D +DYVHRIGRTGRAG SG SIS Sbjct: 301 ESFREGRITVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISF 360 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKP 396 A E+ + LPAIE +G I PD L+ +P+ Sbjct: 361 AGEDDSYQLPAIEALLGRKIKCE-MPPDELLKPVPRK 396 >UniRef50_Q92841 Probable ATP-dependent RNA helicase DDX17 n=25 Tax=Bilateria RepID=DDX17_HUMAN Length = 650 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 138/376 (36%), Positives = 198/376 (52%), Gaps = 11/376 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F V++ L + F TPIQ PL L+GRD+ G AQTG+GKT+A+L + Sbjct: 94 FHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVH 153 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + P + + + P L++APTRELA Q+ A+ + + LK YGG Q++ Sbjct: 154 INHQPYL--ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRD 211 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 LE GV+I I T GRLID+ + NL +VLDEADRM D+GF IR + ++ P Sbjct: 212 LERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPD- 270 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLLQT 249 R +++SAT VR+LA + + + I V E H I + + EK L Sbjct: 271 -RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQ 329 Query: 250 LIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+EE E ++ IIF TK RC+++ + DG + GD +Q +R +L+EF G Sbjct: 330 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGK 389 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE---E 363 IL+ATDVA+RGL + V V NYD P+ EDYVHRIGRT R+ G + + + Sbjct: 390 APILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLK 449 Query: 364 YALNLPAIETYIGHSI 379 A L + +I Sbjct: 450 QARELIKVLEEANQAI 465 >UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL73_AKKM8 Length = 423 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 147/418 (35%), Positives = 217/418 (51%), Gaps = 7/418 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + F + L ++ LE + TPIQA +PL L +D+ G AQTGTGKT AF Sbjct: 1 MVSTTFRELGLSAPILRQLENLEYKTPTPIQAACIPLLLQNKDLMGLAQTGTGKTAAFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L + RALI++PTRELA QIH + A L + +GG GY Sbjct: 61 PLIQQLSER--SGKPPGRRVRALILSPTRELAAQIHENIRAYARGLHLSTAVIFGGVGYA 118 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q K L G+DIL+ T GRLID+ ++ ++L ++ ++LDEAD M D+GF ++ + + Sbjct: 119 SQFKELAGGLDILVATPGRLIDHLERRTVSLDGVETLILDEADHMLDMGFAPALKKIVSK 178 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP-SNEEKM 244 +P +R +FSAT+ +R+LA + E + V P T R+++ L S EK Sbjct: 179 IP--RKRHTQMFSATMPDNIRQLAQTLLQKPETVRVSPPSSTADRVEQFLCMVGSQSEKR 236 Query: 245 RLLQTLIEEEW-PDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 L L++++ P R +IF T+H + + L+ + + GD +Q +R R+L EF Sbjct: 237 LLTLELLKQQELPGRTLIFTRTRHGADRLASFLSGKDYPASAIHGDKSQGRRERMLREFR 296 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G +LVATD+AARG+ + V V NYDLP++ E YVHRIGRT RAGA+G +I+L E Sbjct: 297 SGKTPVLVATDIAARGIDVKDVRLVINYDLPEEPEVYVHRIGRTARAGAAGQAIALCSPE 356 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 + +G +PV + P R R+ + APR R G Sbjct: 357 EIRKARNVHKLLGRLLPVHASSASVPAELRAVPE-ARRKRSSPMQEKRSAPRREPRKG 413 >UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=C4LJP9_CORK4 Length = 823 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 140/365 (38%), Positives = 204/365 (55%), Gaps = 10/365 (2%) Query: 22 EALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRK 81 A++K GF +PIQA +P+ GRDV G AQTGTGKT AF L DR Sbjct: 167 RAVKKVGFETPSPIQAATIPILAQGRDVVGLAQTGTGKTAAFALPILSRL-------DRS 219 Query: 82 VNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQLKVLESGVDILIG 140 +P+AL+++PTRELA+Q+ + A+ G + + YGG Y QL L G I++G Sbjct: 220 QKKPQALVLSPTRELALQVADAFQEFADHLGGVHVLPIYGGQSYGIQLSGLRRGAHIVVG 279 Query: 141 TTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSAT 200 T GR+ID+ ++ ++L ++ +VLDEAD M ++GF +D+ + P LFSAT Sbjct: 280 TPGRVIDHLERGSLDLSELKYLVLDEADEMLNMGFQEDVERILADTPEHK--QTALFSAT 337 Query: 201 LSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAI 260 + +R L+ + + + + ++ +Q+T I ++ ++ K+ L ++E D I Sbjct: 338 MPASIRRLSKQYLEDPREVTIKSQQRTADNIHQQYLLVNHHYKLDALTRILEVTEFDAMI 397 Query: 261 IFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL 320 +FA TK EE+ L A G + GD+AQ +R R +D+ G LDILVATDVAARGL Sbjct: 398 MFARTKQNTEELAEKLRARGFSAAAINGDMAQNQRERTVDQLRDGRLDILVATDVAARGL 457 Query: 321 HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIP 380 + ++HV NYD+P D E YVHRIGRTGRAG SG +I L +IE SI Sbjct: 458 DVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRLLRSIERATKSSIE 517 Query: 381 VSKYN 385 + Sbjct: 518 EMQLP 522 >UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=Alphaproteobacteria RepID=A7IK90_XANP2 Length = 559 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 158/432 (36%), Positives = 232/432 (53%), Gaps = 18/432 (4%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + FS+ L +V AL + TPIQA A+P LAGRD+ G AQTGTGKT AF Sbjct: 32 ESQSLTSFSNLGLAEPIVRALTEAQHVTPTPIQAEAIPQILAGRDLIGIAQTGTGKTAAF 91 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 L+ HP + K RAL+++PTREL+ QI + E + + LA GG Sbjct: 92 ALPILDRLVRHPHRPEPKS--VRALVLSPTRELSGQIVENFEKFGRHANISVSLAIGGVP 149 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 +Q++ L GVD+L+ T GRLID + + + L ++V+VLDEAD+M D+GF+ IR + Sbjct: 150 MGRQIRALSRGVDVLVATPGRLIDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIV 209 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 RR+P ++R ++ FSAT+ + + ELA + + + V P KT R+++ + K Sbjct: 210 RRLP--HKRHSLFFSATMPHAIAELAGSMLRDPVRVAVTPVAKTADRVEQRVILVDKANK 267 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 +LL ++ E DRA++F+ TKH +++ LA G + G+ +Q +R R+L F Sbjct: 268 GQLLAEVLSTEDIDRALVFSRTKHGADKVVRVLAKAGIAAEAIHGNKSQNQRDRVLAAFR 327 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G + L+ATD+AARG+ + V+HV N+DLP+ E YVHRIGRT RAG G +IS E Sbjct: 328 EGKIRTLIATDIAARGIDVTGVSHVINFDLPNVPESYVHRIGRTARAGREGIAISFCDHE 387 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLP---------KPLRLTR----PRTGNGPRR 410 L +IE I +P S +P + R R+G R Sbjct: 388 ERAFLRSIEKLIKMQLPSSDRRGAGTRFAVPELEPIILDERDETSERSDYIGRSGRQNPR 447 Query: 411 TGAPRNR-RRSG 421 PR+ RSG Sbjct: 448 GQRPRHGDERSG 459 >UniRef50_P17844 Probable ATP-dependent RNA helicase DDX5 n=52 Tax=Fungi/Metazoa group RepID=DDX5_HUMAN Length = 614 Score = 559 bits (1441), Expect = e-158, Method: Composition-based stats. Identities = 141/419 (33%), Positives = 214/419 (51%), Gaps = 16/419 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + V++ + ++ F T IQA P+ L+G D+ G AQTG+GKT+++L Sbjct: 95 NFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIV 154 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 ++ P + + + P L++APTRELA Q+ A A LK YGG Q++ Sbjct: 155 HINHQPFL--ERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIR 212 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE GV+I I T GRLID+ + NL +VLDEADRM D+GF IR + ++ P Sbjct: 213 DLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 272 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLLQ 248 R +++SAT VR+LA + + + +I + E H I + + + EK L Sbjct: 273 --RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 330 Query: 249 TLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+EE E ++ I+F TK RC+E+ + DG + GD +Q++R +L+EF G Sbjct: 331 RLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHG 390 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE--- 362 IL+ATDVA+RGL + V V NYD P+ EDY+HRIGRT R+ +G + + Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 450 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 + +L ++ +I NP L + +R R G R +R G Sbjct: 451 KQVSDLISVLREANQAI-----NPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGG 504 >UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCQ8_9CAUL Length = 510 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 144/391 (36%), Positives = 216/391 (55%), Gaps = 4/391 (1%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 K F L+ +++AL +G+ TPIQ A+P + G+D+ G AQTGTGKT A Sbjct: 10 KDTAVSTTFESMGLNKALLQALASEGYTKPTPIQEKAIPDVMQGKDLLGIAQTGTGKTAA 69 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F H L + K R L+++PTRELA QI + G ++ + +GG Sbjct: 70 FALPILHRLAENRIA--PKPRTTRVLVLSPTRELATQIGDSFKAYGAHLGFRVAVIFGGV 127 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y Q + L+ G+DIL+ GRL+D+ +Q +++L + +++VLDEAD+M DLGFIK IR + Sbjct: 128 KYGAQERALQQGLDILVAAPGRLLDHIQQKNLDLSSTEILVLDEADQMLDLGFIKPIRQI 187 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 R+P +R N+ FSAT+ + +LA E + + ++V P+ T RI + + + Sbjct: 188 VSRIPA--KRQNLFFSATMPTEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVHVEQGR 245 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K LL + + R ++F TKH +++ +L A G G + G+ +Q +R R LD F Sbjct: 246 KRALLTEMFSDPEYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLDAF 305 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 +G L +LVATD+AARG+ + V+HV N++LP E YVHRIGRT RAGA G +IS Sbjct: 306 KKGKLRVLVATDIAARGIDVDGVSHVVNFELPHVPEAYVHRIGRTARAGADGTAISFVAG 365 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDL 393 + L IE IP D + L Sbjct: 366 DEMKLLKDIEKVTRQKIPAIDRRNDKALGQL 396 >UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms RepID=Q2NEZ7_METST Length = 583 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 144/391 (36%), Positives = 228/391 (58%), Gaps = 10/391 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + KF D + P++ +A+ GF +PIQ+LA+P LA +DV GQAQTGTGKT AF Sbjct: 1 MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGY 124 + D + N +A+I+ PTRELA+Q+ + L+ + + YGG Sbjct: 61 PLLENI-------DSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPI 113 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 D+Q+K L+ GV I+IGT GR++D+ + ++L I+ V+LDEAD M D+GF +DI ++ Sbjct: 114 DRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILE 173 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P +R +LFSATL + +LA N E ++V + T ++++ F + K+ Sbjct: 174 DIPY--ERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKL 231 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 LL L++ D +++F NTK + +++ HL G+ L GD+ Q +R R++ +F + Sbjct: 232 ELLSRLLDLHDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKK 291 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G+++ILVATDVAARG+ + V VFN+D+P+D E YVHRIGRTGRAG +G + S Sbjct: 292 GNIEILVATDVAARGIDVGGVEAVFNFDIPNDNEYYVHRIGRTGRAGKTGKAYSFVSGRE 351 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLPK 395 L I+ Y I + + + ++ K Sbjct: 352 IYQLRDIQRYAKTKIEQAPIPALSDVEEVKK 382 >UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae RepID=C5TNR4_NEIFL Length = 487 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 158/411 (38%), Positives = 226/411 (54%), Gaps = 5/411 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS L ++V AL +G+ N TPIQA A+P LAG D+ AQTGTGKT AF+ + Sbjct: 28 FSSLGLGSELVSALTDQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLEL 87 Query: 71 LLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + + P R L++ PTRELA QI + + + L+ + +GG DKQ Sbjct: 88 LKRYATSSTSPAMHPVRMLVLTPTRELADQIDQNVQAYIKNLPLRHTVLFGGVNMDKQTA 147 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L +G +I++ T GRL+D+ KQ +INL +++VVLDEADRM D+GFI DIR + + +P Sbjct: 148 DLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLP-- 205 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 QR +LFSAT S +R+LA + M+ E +EV + T +++ + +K LL+ Sbjct: 206 KQRQTLLFSATFSPPIRKLAQDFMHTPEMVEVAAQNTTNANVEQHIIAVDALKKRSLLER 265 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI + ++ I+F TK +++ L + GD +Q+ RL L+ F G L + Sbjct: 266 LIVDLHMNQVIVFCKTKQSVDQVTRDLVRRNIAAQSIHGDKSQQSRLETLNAFKEGTLRV 325 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL I + V NY+LP EDYVHRIGRTGRAGA G +ISL + Sbjct: 326 LVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDKTEQKMFE 385 Query: 370 AIETYIGHSIPVSKYNPDA--LMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 AI+ G + V + + + +P N R RN+R Sbjct: 386 AIKELTGSDLNVERIEGFEPHWWDNDNQNEAEAQPVQHNDSRSRRDDRNKR 436 >UniRef50_P24346 Putative ATP-dependent RNA helicase an3 n=63 Tax=Eukaryota RepID=DDX3_XENLA Length = 697 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 129/389 (33%), Positives = 197/389 (50%), Gaps = 17/389 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F D + ++ ++ + TP+Q A+P+ + RD+ AQTG+GKT AFL Sbjct: 221 ESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPIL 280 Query: 69 HYL-----------LSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGL 117 + L R+ P +L++APTRELAVQI+ +A A + ++ + Sbjct: 281 SQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRPCV 340 Query: 118 AYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIK 177 YGG +Q++ LE G +L+ T GRL+D ++ I L + +VLDEADRM D+GF Sbjct: 341 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEP 400 Query: 178 DIRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEEL 235 IR + + MPP R M+FSAT ++ LA + ++ ++ V T I +++ Sbjct: 401 QIRRIVEQDTMPPKGVRQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENITQKV 460 Query: 236 FYPSNEEKMRLLQTLIEEEWPDR-AIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKK 294 + +K L L+ D ++F TK + + L +G+ + GD +Q+ Sbjct: 461 VWVEEMDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRD 520 Query: 295 RLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG 354 R L +F G ILVAT VAARGL I V HV N+DLP D E+YVHRIGRTGR G G Sbjct: 521 REEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLG 580 Query: 355 HSISLACEEYALNLPAIETYI---GHSIP 380 + S E+ + + +P Sbjct: 581 LATSFFNEKNINITKDLLDLLVEAKQEVP 609 >UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QD85_9SPHI Length = 643 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 139/371 (37%), Positives = 220/371 (59%), Gaps = 10/371 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS A+ P++++A+ GF + +PIQA A+P L GRDV GQAQTGTGKT AF Sbjct: 33 FSSLAISPELLQAVTDMGFISPSPIQAEAIPPILDGRDVIGQAQTGTGKTAAFGIPALDL 92 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLK 129 + D + + LI+ PTRELA+Q+ + + LA+ G+++ YGGD ++Q++ Sbjct: 93 I-------DVQDRSVQTLILCPTRELALQVAEEIKKLAKYKRGIRIEAIYGGDSIERQIR 145 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+SGV I+IGT GR++D+ ++N + L +++++LDEAD M D+GF +DI + MP Sbjct: 146 SLKSGVHIVIGTPGRVMDHMERNTLKLNNVKMMILDEADEMLDMGFREDIESILEEMPE- 204 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSAT+S + ++ + + ++V ++ T I++ F ++ K+ ++ Sbjct: 205 -ERQTILFSATMSKPIMQITQKFQKDPVLVKVVKKELTNVNIEQVYFEVKSKAKVEVMCR 263 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI+ ++F NTK + +EI L G++ L GD+ Q +R ++ +F G +I Sbjct: 264 LIDMYDLKLLLVFCNTKRKVDEIVEDLQIRGYQAEGLHGDLRQAQRNNVMSKFRAGTTNI 323 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARG+ + V V N+D+P D E YVHRIGRTGRAG SG + S + Sbjct: 324 LVATDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSFVGRDEKYRFR 383 Query: 370 AIETYIGHSIP 380 I+TY + Sbjct: 384 EIQTYTKVKVE 394 >UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFK0_ACHLI Length = 448 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 139/407 (34%), Positives = 215/407 (52%), Gaps = 4/407 (0%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KFS+ + ++ +AL G+ T IQ A+P+ L+G+D+ G AQTGTGKT AF Sbjct: 1 MKFSELNIIERIQKALTLSGYEAPTAIQEQAIPILLSGQDLLGSAQTGTGKTAAFAIPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + + +ALI+ PTRELA+QIH + + A+ + YGG +Q Sbjct: 61 QKIYETK--EHKAPRKVQALILTPTRELALQIHENVKIYAKYLNIISTTIYGGVSQKRQE 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ GVD++I T GRL+D Q I+L ++ +VLDEAD+M D+GFIKD+ + + P Sbjct: 119 EALKRGVDVVIATPGRLLDLMNQKIISLQDVRYLVLDEADQMLDMGFIKDVTSIVDKTP- 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R MLFSAT+ ++ L+ + + N E I V P +T I + ++ + K LL Sbjct: 178 -KKRQTMLFSATMPKQIEVLSKQILVNPERIAVTPVTQTLDAITQSVYMVNKANKTLLLI 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI ++F TKH ++ +L G + G +Q R R L F +G Sbjct: 237 DLIYTLNMKSVLVFTKTKHGANKLVKNLMNLGIESEPIHGSKSQAARERALANFKKGKTK 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARG+ I A+ +V N++LP+ E Y+HRIGRTGRAG SG ++SL L Sbjct: 297 ILVATDIAARGIDIEALDYVINFELPEVPETYIHRIGRTGRAGLSGMALSLVDPSEQKLL 356 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 +E +I I + + + + +T ++ + Sbjct: 357 TQVEKHINSKIEAVGHKYQIQSQPKQREVITDKLKTDTSKKQEKPKK 403 >UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Neisseria RepID=A9M0D7_NEIM0 Length = 457 Score = 556 bits (1433), Expect = e-157, Method: Composition-based stats. Identities = 157/424 (37%), Positives = 228/424 (53%), Gaps = 14/424 (3%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS FS L ++V AL +G+ N TPIQA A+P LAG D+ AQTGTGKT Sbjct: 1 MSNP------FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKT 54 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAY 119 AF+ + L + + P R L++ PTRELA QI + + + L+ + + Sbjct: 55 AAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLF 114 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG DKQ L +G +I++ T GRL+D+ KQ +I+L +++VVLDEADRM D+GFI DI Sbjct: 115 GGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNIHLNKVEIVVLDEADRMLDMGFIDDI 174 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R + + +P QR +LFSAT S +R+LA + MN E +EV + T +++ + Sbjct: 175 RKIMQMLP--RQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVD 232 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K LL+ LI + ++ I+F TK + + L + GD +Q+ RL L Sbjct: 233 TIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETL 292 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F G+L +LVATD+AARGL I + V NY++P EDYVHRIGRTGRAGA G +ISL Sbjct: 293 NAFKDGNLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAISL 352 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALM-----TDLPKPLRLTRPRTGNGPRRTGAP 414 E +I+ G+ + + + P+ + PR N A Sbjct: 353 MDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKPEKPEMREPRQRNRYESAKAQ 412 Query: 415 RNRR 418 R + Sbjct: 413 REKN 416 >UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P265_ERYRH Length = 594 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 133/405 (32%), Positives = 209/405 (51%), Gaps = 9/405 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + L ++V A+ +KG+ T IQ+ A+P+ L D+ Q+QTGTGKT AF Sbjct: 17 MTFKELELEEEIVRAVTEKGYEEPTDIQSQAIPILLGNHDLLAQSQTGTGKTAAFGLPML 76 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQ 127 L+ P R + LI+ PTREL +Q+ + ++ G+ + YGG DKQ Sbjct: 77 S--LTQPGDKKRTNS----LILCPTRELCMQVAEEMRSFSKYKQGVNIACVYGGSPIDKQ 130 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L+ G DI++ T GRL+D+ ++ I L + +VLDEAD M ++GFI+DI +F +P Sbjct: 131 IRDLKRGADIVVATPGRLMDHIRRKTIRLDDCRHIVLDEADEMLNMGFIEDIEEIFSFLP 190 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R FSAT+ + +L+ + + E I + T RIK+ + + +K+ L Sbjct: 191 E--ERQFAFFSATMPKEIVKLSEKFLVEPERITLSRNNLTVSRIKQIYYTVESRDKVDLT 248 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ +IF NTK +E+ L G L GD+ Q+ R ++ F +G + Sbjct: 249 IQLLQLHKTSGTMIFCNTKKMVDELTTQLNKAGFPALGLHGDMKQEMRSMVMSRFKKGMV 308 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +L+ATDVAARG+ + ++ V NYD+P + E YVHRIGRTGRAG G +I+L Sbjct: 309 SVLIATDVAARGIDVDSMDVVINYDIPQELEYYVHRIGRTGRAGKEGLAITLVSRRQRYA 368 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG 412 + IE +I + + DL R N + Sbjct: 369 IKQIERLSNSTIVETPLPTKEQLNDLMVDQLAREIRKWNDHEQGK 413 >UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=Oryza sativa Japonica Group RepID=RH30_ORYSJ Length = 666 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 146/416 (35%), Positives = 214/416 (51%), Gaps = 12/416 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + ++A+ K GF TPIQ+ P+ L GRD+ G AQTG+GKT+++L + Sbjct: 253 FQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVH 312 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + + P + + + P LI+APTRELAVQI ++ + + YGG Q++ Sbjct: 313 VGAQPRL--EQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRD 370 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GV+I+I T GRLID + H NL + +VLDEADRM D+GF IR + ++ P Sbjct: 371 LRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPD- 429 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVE-PEQKTGHRIKEELFYPSNEEKMRLLQT 249 R + +SAT V LA + + N + + P+ K H I++ + S EK L Sbjct: 430 -RQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSK 488 Query: 250 LIEE-EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ + R +IF TK C+++ L DG + GD AQ +R +L EF G Sbjct: 489 LLSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSP 548 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC---EEYA 365 I+ ATDVAARGL + + V N+D P EDY+HRIGRTGRAGASG + + +++ Sbjct: 549 IMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFS 608 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP---RNRR 418 NL I G + + + + + +R R G G R R RR Sbjct: 609 RNLVKILREAGQVVNPALESMAKSASSMGGGNFRSRGRGGFGNRSGSNSIPIRGRR 664 >UniRef50_A6V0P4 ATP-dependent RNA helicase RhlB n=15 Tax=Pseudomonadaceae RepID=A6V0P4_PSEA7 Length = 529 Score = 554 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 174/395 (44%), Positives = 241/395 (61%), Gaps = 2/395 (0%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + + +F DF L P ++ A+ GF CTPIQA L TL G+D G+AQTGTGKT A Sbjct: 135 EPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAA 194 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL S LL P +R + +PRALI+APTREL VQI DA L + TGL + GG Sbjct: 195 FLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGM 254 Query: 123 GYDKQLKVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 +DKQLK LE+ DIL+ T GRL+D+ ++ ++L ++V+VLDEADRM D+GFI +R Sbjct: 255 DFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQ 314 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + R+ P +R +LFSAT + V LA + + +E+EPE +++ ++ + Sbjct: 315 IIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGS 374 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 +K +LL L+ + +R ++FAN K I L DG ++GDV Q KR+R L+ Sbjct: 375 DKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEG 434 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +LVATDVA RG+HI ++HV N+ LP+D +DYVHRIGRTGRAGASG SIS A Sbjct: 435 FREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAG 494 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKP 396 E+ A LP IE +G I P L+ +P+ Sbjct: 495 EDDAFALPPIEELLGRKITCE-MPPAELLKPVPRK 528 >UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bacteria RepID=D2NRF7_9MICC Length = 732 Score = 554 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 136/394 (34%), Positives = 199/394 (50%), Gaps = 4/394 (1%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 K +F+D L +V+ ALE+ G+ +PIQ +PL L G DV G AQTGTGKT A Sbjct: 55 KAEEEGVRFTDLGLDARVLAALEEVGYEKPSPIQEQTIPLLLEGHDVVGLAQTGTGKTAA 114 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGG 121 F + I + + L++APTRELA+Q+ A + YGG Sbjct: 115 FALPALSRMAELADINGVSRD-TQVLVLAPTRELALQVAEAFSSYATHMEDFTVLPIYGG 173 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y QL L G +++GT GR+ID+ ++ ++L +Q +VLDEAD M +GF +D+ Sbjct: 174 SPYGPQLAGLRRGAQVVVGTPGRVIDHLEKGSLDLSNLQYLVLDEADEMLRMGFAEDVEK 233 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + P + LFSAT+ +R++A + +N+ + V+ + T I + + Sbjct: 234 ILEGTPDSK--QVALFSATMPNSIRKIAQQYLNDPREVRVKAKTTTSSNISQRYMQVMHS 291 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K+ + ++E E D I+F TK EE+ L A G + GD+ Q+ R R +D Sbjct: 292 HKLDAMTRVLEVENYDGIIVFVRTKKETEEVADKLKARGFAAAAINGDIPQQLRERTVDA 351 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 G +DILVATDVAARGL + ++ V NYD+P D E YVHRIGRTGRAG G +I Sbjct: 352 LRDGRIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILFVT 411 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPK 395 L IE + + + K Sbjct: 412 PREKYMLRQIEKATRQKVEPMHMPTAEAVNETRK 445 >UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zymomonas mobilis RepID=C8WFI7_ZYMMN Length = 506 Score = 554 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 144/415 (34%), Positives = 221/415 (53%), Gaps = 12/415 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+D L ++++A+ + G+ TP+QA A+P L RD+ AQTGTGKT +F+ Sbjct: 15 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 74 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L A + PR+LI+ PTRELA Q+ + E + L + L GG +Q Sbjct: 75 DIL----AHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQ 130 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 LE GVD+LI T GRL+D ++ I L + +++V+DEADRM D+GFI DI + ++P Sbjct: 131 AALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPT 190 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + R +LFSAT+ +++LA ++N + IE+ I + L S K + L Sbjct: 191 S--RQTLLFSATMPPAIKKLADRFLSNPKQIEISRPATANTLIDQRLIEVSPRSKKKKLC 248 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ E AIIF N K ++ L G VG + GD++Q +R L+ F G + Sbjct: 249 DMLRAEKDHTAIIFCNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELERFKNGQIS 308 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVA+D+AARGL + ++HVFN+D+P +DY+HRIGRTGR GASG +++ + Sbjct: 309 VLVASDIAARGLDVKGISHVFNFDVPTHPDDYIHRIGRTGRGGASGEALTFVTPADEEAI 368 Query: 369 PAIETYIGHSIPVSK------YNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNR 417 AIE +G IP Y + T PK + + ++ R + Sbjct: 369 TAIEKLMGVEIPRLGNRKKNAYPSKSEETVSPKQAKPVQEKSAASSPRKAPRKTE 423 >UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTY3_CHLT3 Length = 431 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 151/381 (39%), Positives = 205/381 (53%), Gaps = 5/381 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ F +L+P ++ AL++ G+ T IQA A+P + G+D+ AQTGTGKT AF Sbjct: 1 MSLINFESISLNPSILRALKELGYETPTAIQAAAIPEAILGKDILATAQTGTGKTAAFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 H L + + + PRALI+ PTRELA+QI + A L+ G+ GG Sbjct: 61 PILHRLGENRSYD---IRAPRALILTPTRELALQIDNNIRLYARYLRLRTGVIMGGVPAH 117 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+K+L DIL+ T GRLID Q I L IQ VLDEADRM D+GFI DIR + Sbjct: 118 PQIKMLRRNPDILVATPGRLIDLFDQGFIGLDQIQTFVLDEADRMLDMGFIDDIRRIESL 177 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P +LFSATLS + LA + IEV P I +++ + K Sbjct: 178 QP--RDHQTLLFSATLSPEIEALASRMLREPVRIEVAPVSSVADNITQKVLFVEQNNKRE 235 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL L +E RA++F TK R + L G + +Q+ R R L F RG Sbjct: 236 LLHNLFKENDIKRALVFTRTKQRANHVAEQLIRLGISADAIHSSKSQRARQRALMLFDRG 295 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 +++LVATD+AARG+ + ++HV NY+LPDD E+YVHRIGRT RAGASG ++S + Sbjct: 296 KINVLVATDIAARGIDVDGISHVINYELPDDPENYVHRIGRTARAGASGTALSFCDADEV 355 Query: 366 LNLPAIETYIGHSIPVSKYNP 386 L IE SI + NP Sbjct: 356 RMLKGIEKLTKSSIAICDNNP 376 >UniRef50_C4QFR3 DEAD box ATP-dependent RNA helicase, putative n=2 Tax=Schistosoma RepID=C4QFR3_SCHMA Length = 944 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 140/407 (34%), Positives = 212/407 (52%), Gaps = 12/407 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F+D LH + E + + + + TP+Q ALP+ A RD+ AQTG+GKT AFL Sbjct: 159 KSFNDVELHQIIKENVTRAQYIHPTPVQKYALPIIAAKRDLMACAQTGSGKTAAFLLPIL 218 Query: 69 HYLLSHPAIADRKVNQ------PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 + L + + P ALI+APTREL+ QI+ +A + + +K + YGG Sbjct: 219 NMLFEDNHCENSDASALSCAVCPLALILAPTRELSSQIYDEARKFSYRSNIKPCVVYGGA 278 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q++ L G ++L+ T GRL+D + ++L I+ VLDEADRM D+GF IR + Sbjct: 279 SILAQIRELSHGCNLLVATPGRLVDMVSRGKVSLEQIRFFVLDEADRMLDMGFEPQIRRI 338 Query: 183 FRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + MPPA +R ++FSAT ++ LA + +++ ++ V T I +E+ ++ Sbjct: 339 VEQHGMPPAGKRQTLMFSATFPKEIQTLARDFLHSYIFLAVGRVGSTNENIIQEVLNVAD 398 Query: 241 EEKMRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 ++K +L L++ + PD A++F TK + + L V + GD Q +R L Sbjct: 399 KDKPDMLVRLLQGKDPDGLALVFVETKRGADVLAKFLCQLNFPVTSIHGDRPQTEREHAL 458 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 F G IL+AT VAARGL IP V HV N+DLP D E+YVHRIGRTGR G G + S Sbjct: 459 QSFRSGRTPILIATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRMGQPGSATSF 518 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGN 406 E+ + + + S + P L + P R N Sbjct: 519 FSEKNQNVVRDLVELLRES---KQAVPPWLEARVAYPSGPASRRNKN 562 >UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryota RepID=DBP2_ASPNC Length = 565 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 138/378 (36%), Positives = 208/378 (55%), Gaps = 11/378 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F + V+ ++ +GF T IQ+ P+ L+GRDV G A+TG+GKT+ + Sbjct: 137 ETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 196 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ + P +A + P LI+APTRELAVQI A+ +++ ++ YGG Q+ Sbjct: 197 VHINAQPLLA--PGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQI 254 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GV++ I T GRLID + NL + +VLDEADRM D+GF IR + ++ P Sbjct: 255 RDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRP 314 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLL 247 R ++SAT VR+LA + +N+ + + + HRI + + S+ EK + Sbjct: 315 D--RQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKM 372 Query: 248 QTLIE---EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 +E E ++ +IF TK +EI L DG + GD Q++R +L+EF Sbjct: 373 IKHLEKIMENRANKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT 432 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC--- 361 G I+VATDVA+RG+ + +THV NYD P++ EDYVHRIGRTGRAGA G +I+ Sbjct: 433 GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDN 492 Query: 362 EEYALNLPAIETYIGHSI 379 + A +L I T I Sbjct: 493 SKQARDLVTILTEAKQQI 510 >UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 Tax=Leptospira RepID=Q04VV9_LEPBJ Length = 513 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 138/381 (36%), Positives = 211/381 (55%), Gaps = 10/381 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + KFS+ L ++ A+ + GF +PIQ+ A+P+ L G+D+ G AQTGTGKT AF Sbjct: 1 MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGY 124 L + + +ALI+ PTREL +Q+ L + G ++ YGG Sbjct: 61 PAIELL-------EVESKHLQALILCPTRELVIQVSEQFRKLMKYKGNFEVVPVYGGQEI 113 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 ++QLK L I+I T GR++D+ ++ I L I++VVLDEAD M D+GF +D+ ++ + Sbjct: 114 ERQLKALRKNPQIVIATPGRMMDHMRRGSIRLNDIKIVVLDEADEMLDMGFREDMEFILK 173 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 P R ++FSAT++ + L + + I+V ++ + +I++ + K Sbjct: 174 DTPID--RQTIMFSATMTEDILTLMKRFQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKG 231 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L LIE A++F NTK + + + L + G+ L GD+ QK+R ++++ F Sbjct: 232 EALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRN 291 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G+++ILVATDVA RG+ + V VFNYDLP D EDYVHRIGRTGRAG G + S + Sbjct: 292 GNIEILVATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQ 351 Query: 365 ALNLPAIETYIGHSIPVSKYN 385 NL IE G I K Sbjct: 352 IYNLKKIERINGIKIEAGKIP 372 >UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID=O97032_DUGJA Length = 781 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 142/416 (34%), Positives = 215/416 (51%), Gaps = 5/416 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F + L P + + + TPIQ A+P L RD+ AQTG+GKT AFL Sbjct: 184 ENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPII 243 Query: 69 HYLLSHPAIADR--KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 ++L+ R K P+ LI+APTRELA+QI ++++ + T L+ + YGG Sbjct: 244 NHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHS 303 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF--R 184 Q++ ++ G +L+ T GRL+D+ ++N I+L + +VLDEADRM D+GF IR + Sbjct: 304 QIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEES 363 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 MP R ++FSAT +++LA + + N ++ V T IK+E+ Y ++ EK+ Sbjct: 364 NMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIYMTDVEKL 423 Query: 245 RLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 L+ + P+ +IF TK + + L + G+ V + GD +Q +R L F Sbjct: 424 NYLKNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVEREAALSMFR 483 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G ILVAT VAARGL IP V HV NYDLP D E+YVHRIGRTGR G G + S ++ Sbjct: 484 NGQCPILVATAVAARGLDIPNVKHVINYDLPSDIEEYVHRIGRTGRLGNHGRATSFYVDK 543 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 + + + + AL +L + + + RR R Sbjct: 544 NNNIAIDLVDLLKEANQIVPQWLSALADELKRNSTMGSNNKRHNQRRYKNGNFGGR 599 >UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGQ2_KOSOT Length = 524 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 140/374 (37%), Positives = 209/374 (55%), Gaps = 10/374 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 FS+ L K++ ++EK GF TPIQ+ A+P+ L GRD+ GQA TGTGKT AF Sbjct: 2 SMNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIPL 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDK 126 L D + +ALI+ PTRELAVQ+ + LA +++ YGG ++ Sbjct: 62 LEML-------DYSSKKVQALILCPTRELAVQVAREIAALASNRKEIEVLAIYGGQSIER 114 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+ L+ G+ +++GT GR++D+ ++ + L + VVLDEAD M ++GF++DIR++ + Sbjct: 115 QINTLKKGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLNMGFLEDIRYILSHV 174 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 +R +FSAT+ + LA E E I+V + T +++ K Sbjct: 175 --GKERQITMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDA 232 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L LIE P +++F NTK + +E+ L A G+ V L GD++Q R R+++ F Sbjct: 233 LSKLIEYYNPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKS 292 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + +LVATDVAARG+ + + VFNYD+P D E YVHRIGRTGRAG +G + S A Sbjct: 293 IKVLVATDVAARGIDVDDIEAVFNYDIPQDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLH 352 Query: 367 NLPAIETYIGHSIP 380 L I+ Y I Sbjct: 353 RLREIQRYTKIKIK 366 >UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA Length = 801 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 133/382 (34%), Positives = 208/382 (54%), Gaps = 8/382 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 + + F + ++ + L K F TP+Q ++P+ ++GRD+ AQTG+GKT AFL Sbjct: 350 SIKSFEEAGIYDGFMTNLVKAHFEKPTPVQKYSIPIVMSGRDLMACAQTGSGKTAAFLLP 409 Query: 67 TFHYLLSHPAIAD--RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 ++ + V +P+AL++APTRELA+QI DA + T L+ + YGG Sbjct: 410 VLTGMMKNGLTGSAFSDVQEPQALVVAPTRELALQIFNDARKFSHGTMLRPVVLYGGTSV 469 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 QLK +E+G I++GT GRLID + I+L ++ ++LDEADRM D+GF DI+ + Sbjct: 470 GYQLKQVENGAHIVVGTPGRLIDVINKGKISLAKLKYLILDEADRMLDMGFGPDIKKIVH 529 Query: 185 RM--PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 + P +R ++FSAT +++LA + +N+ ++ V + + F ++ Sbjct: 530 ELGTPEKTERQTLMFSATFPEEIQKLAGDFLNDYLFLTVGRVGGACSDVTQHFFQVDRQQ 589 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K + L ++ E D+ ++F K + + +L+ G + GD Q++R L +F Sbjct: 590 KRQKLCDILSESGADKTLVFVEQKRNADFLASYLSESGFPTTSIHGDRLQREREEALRDF 649 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 +G IL+AT VAARGL IP V HV NYDLP ++YVHRIGRTGR G G + S E Sbjct: 650 KQGKAPILIATSVAARGLDIPNVKHVINYDLPQSIDEYVHRIGRTGRCGNLGKATSFFSE 709 Query: 363 EY----ALNLPAIETYIGHSIP 380 + A L I +IP Sbjct: 710 DGDGSLAKPLMRILVDAQQNIP 731 >UniRef50_Q4UPY5 ATP-dependent RNA helicase rhlB n=186 Tax=Gammaproteobacteria RepID=RHLB_XANC8 Length = 573 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 225/401 (56%), Positives = 276/401 (68%), Gaps = 2/401 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS LT+ FS F LHP +V LE GF CTPIQAL LP+ L G DVAGQAQTGTGKT Sbjct: 1 MSDKPLTDLTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +AFL + + LL PA+ADRK PRALI+APTRELA+QIH DA GL+ L YG Sbjct: 61 LAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG 120 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQ-NHINLGAIQVVVLDEADRMYDLGFIKDI 179 G YDKQ ++L+ GVD++I T GRLIDY KQ ++L A ++ VLDEADRM+DLGFIKDI Sbjct: 121 GVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI 180 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R+L RRMP R +LFSATLS+RV ELA+E MN E + VE E T R+++ +++PS Sbjct: 181 RFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPS 240 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +EEK LL L+ R ++F NTK E + L G+RVG+L+GDV QKKR +L Sbjct: 241 DEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLL 300 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F +G L+ILVATDVAARGLHI V +V+NYDLP D EDYVHRIGRT R G G +IS Sbjct: 301 NRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF 360 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 ACE YA++LP IE YI IPV + L+T LP+ R T Sbjct: 361 ACERYAMSLPDIEAYIEQKIPVEPVTTE-LLTPLPRTPRAT 400 >UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Tax=Eukaryota RepID=DDX17_DICDI Length = 785 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 132/379 (34%), Positives = 209/379 (55%), Gaps = 9/379 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 +F+ +++ + GF N TPIQ+ A P+ L GRD+ G A+TG+GKT+AFL + Sbjct: 384 MQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSI 443 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ + P + R+ + P L++APTRELA+QI + + + YGG Q+ Sbjct: 444 VHINAQPVL--REDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQV 501 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L+ GV+I+I T GRLID + NL + +VLDEADRM D+GF IR + ++ P Sbjct: 502 AALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRP 561 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTG-HRIKEELFYPSN-EEKMRL 246 R ++FSAT V+ LA + + + + + + T H +++ + + E+K R+ Sbjct: 562 D--RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERM 619 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L L ++ I+FA T+ +++ L G + + G+ +Q +R +L +F G Sbjct: 620 LSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGM 679 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + I++ATDVA+RGL I + +V NYD P+ E Y+HRIGRT RAGASG S SL + A Sbjct: 680 VPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNAR 739 Query: 367 N---LPAIETYIGHSIPVS 382 L + T IP+ Sbjct: 740 LANELIKVLTEAKQKIPIE 758 >UniRef50_Q1AG34 Ded1-like DEAD-box RNA helicase n=3 Tax=Coelomata RepID=Q1AG34_CHITE Length = 776 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 142/416 (34%), Positives = 210/416 (50%), Gaps = 23/416 (5%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F D L + ++ + TP+Q A+P+ L+GRD+ AQTG+GKT AFL Sbjct: 267 TSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMSCAQTGSGKTAAFLVPIL 326 Query: 69 HYLLSHPAIAD--------RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 + +L A + R+ P L++APTRELA QI+ +A+ + + ++ + YG Sbjct: 327 NRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEAKKFSYRSRMRPAVLYG 386 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G+ +Q++ L+ G +++ T GRL D + I L ++ +VLDEADRM D+GF IR Sbjct: 387 GNNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLDEADRMLDMGFEPQIR 446 Query: 181 WLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP 238 + MPP QR ++FSAT ++ELA + ++N ++ V T I + + + Sbjct: 447 HIIENRDMPPTGQRQTLMFSATFPKNIQELASDFLSNYIFLAVGRVGSTSENITQTILWV 506 Query: 239 SNEEKMRLLQTLIEEEWPDR--------AIIFANTKHRCEEIWGHLAADGHRVGLLTGDV 290 + EK L L+ +IF TK + + L + H V + GD Sbjct: 507 NENEKRSYLLDLLSRLREGSPDYSPDSLTLIFVETKKGADALEEFLYQNKHPVTSIHGDR 566 Query: 291 AQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRA 350 +Q++R L F GD ILVAT VAARGL IP V HV NYDLP D E+YVHRIGRTGR Sbjct: 567 SQREREDALKCFRSGDCPILVATAVAARGLDIPHVKHVINYDLPSDVEEYVHRIGRTGRM 626 Query: 351 GASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGN 406 G G + S E+ + + + I ++ P L R PR N Sbjct: 627 GNLGIATSFFNEKNRNIVSDLVELL---IETNQELPSFLEEMAND--RYGGPRRSN 677 >UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax=Campylobacter fetus RepID=A0RP33_CAMFF Length = 624 Score = 552 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 149/411 (36%), Positives = 219/411 (53%), Gaps = 7/411 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FSDF L ++EAL++ + T IQ +A+P + G+D+ A+TGTGKT AF Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L S R Q R L++ PTRELA Q+ + + A+ K +GG Q++ Sbjct: 63 LSSKERNKKRP--QTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQA 120 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+SG+DI++ T GRL+D A QN ++L I +V DEADRM+D+GFI DI+ + + +P Sbjct: 121 LKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPE-- 178 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R N+LFSAT V L + + I++E + T I + + ++KM LL + Sbjct: 179 KRQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDKKMELLNEV 238 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 E D+A++F TK ++ +L G V L GD +Q R + L++F G IL Sbjct: 239 FGVESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKIL 298 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARGL I + V N +LP+ EDYVHRIGRTGRAG G +ISL C + L Sbjct: 299 VATDIAARGLDIKELPFVINLELPNVPEDYVHRIGRTGRAGNDGVAISLVCVDEFKFLID 358 Query: 371 IETYIGHSI---PVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 IE I + S + D + P ++ R G +++ Sbjct: 359 IEKLIDKKLIRESFSGFEADLRVKPQPIRRGQNMNKSSERDDRNGNKIDKK 409 >UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9Z2_9RHIZ Length = 657 Score = 552 bits (1424), Expect = e-156, Method: Composition-based stats. Identities = 145/412 (35%), Positives = 216/412 (52%), Gaps = 7/412 (1%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 LT + F F + AL + G+ TPIQ ALP L GRD+ G A+TG+GKT F+ Sbjct: 22 TLTIENFEAFGFAEPLSRALTQCGYVTPTPIQVQALPPQLEGRDLLGMAETGSGKTATFV 81 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 + S ++ Q AL++APTRELA+QI + LA ++ + GG Sbjct: 82 LPLLQKIASQ--NSEPAPKQVLALVLAPTRELAIQIDQEVASLARNMRIRRAVVLGGVSK 139 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q+ L+ GV +L+ T GRL+D +L ++ +VLDEADRM+D+GFI+DI+ + Sbjct: 140 GPQINALKRGVHVLVATPGRLLDLINMRTCDLSRVETLVLDEADRMFDMGFIRDIKKIVA 199 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P A R LFSAT+ +++ A++ + +++ + RI +++ EK Sbjct: 200 MLPEA--RRTALFSATMPVEIKKFAYDILKEPYRVDLSSKSVVVDRIDQKVMIVRTTEKQ 257 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L T++ +E R I+F TK + + L G G+ AQ R R L++F Sbjct: 258 SRLHTILADEACKRVIVFTRTKRGADRVAERLGMAGISASAFHGNKAQNARQRALNDFMM 317 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G + +LVATD+AARG+ + +THV N+D+P D E YVHR+GRT R G SG +ISL Sbjct: 318 GHIRVLVATDIAARGIDVSNITHVVNFDMPLDPETYVHRVGRTARKGNSGIAISLCDPGE 377 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 + AIE + + V D LP P R R GPRR G ++ Sbjct: 378 RQEITAIERMMKQKLEVI---ADVGGEALPMPERRQHHRAETGPRRDGDRQH 426 >UniRef50_Q1ECV0 LOC556764 protein (Fragment) n=21 Tax=Eukaryota RepID=Q1ECV0_DANRE Length = 519 Score = 551 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 137/378 (36%), Positives = 198/378 (52%), Gaps = 11/378 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F V++ L ++ F T IQA PL L+GRD+ G AQTG+GKT+A+L Sbjct: 95 TNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI 154 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ P + + + P L++APTRELA Q+ A +++ +K YGG Q+ Sbjct: 155 VHINHQPYL--ERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQI 212 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + LE GV+I I T GRLID+ + NL +VLDEADRM D+GF IR + ++ P Sbjct: 213 RDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRP 272 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLL 247 R +++SAT VR+LA + + + I + E H I + + EK L Sbjct: 273 D--RQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKL 330 Query: 248 QTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L+EE E ++ IIF TK RC+E+ + DG + GD +Q +R +L EF Sbjct: 331 IQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRS 390 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE-- 362 G IL+ATDVA+RGL + V V NYD P+ EDYVHRIGRT R+ G + + Sbjct: 391 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 450 Query: 363 -EYALNLPAIETYIGHSI 379 A +L + +I Sbjct: 451 LRQARDLVRVLEEARQAI 468 >UniRef50_A5EYB1 ATP-dependent rna helicase Rhl n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYB1_DICNV Length = 432 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 205/430 (47%), Positives = 273/430 (63%), Gaps = 12/430 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ + F+DF +H ++EALE F TPIQA LPLTLAG DV G AQTGTGKT Sbjct: 1 MTNENKNTAHFTDFPIHSALLEALEDIHFTKTTPIQAQTLPLTLAGYDVMGIAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AFL S HYL+++P K P A+++APTRELA+QI + + L TGL YG Sbjct: 61 AAFLLSLMHYLMTNP--VHPKAKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAIYG 118 Query: 121 GDGYDKQLKVLES-GVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 G + Q K+ ++ VD++IGT GR+ID KQ L I+V VLDEADRM+DLGFI D+ Sbjct: 119 GTSIEHQKKLFQACNVDVIIGTPGRIIDLFKQKVFRLKNIEVCVLDEADRMFDLGFIDDV 178 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R+L R+MPPA +RLN+LFSAT+ +V+ELA+E N + + +E +Q T + I L++ + Sbjct: 179 RYLLRQMPPAYERLNLLFSATMPQKVQELAYEHFNAPKVVAIESQQTTANNITHYLYHTA 238 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 EK LL L E P+R++IF NTKH E + L A+G+ L+GDVAQKKR +I+ Sbjct: 239 KHEKTPLLLGLFARERPERSMIFLNTKHDLERLSLVLTANGYHNAALSGDVAQKKREQII 298 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 +F G ++I+VATDVAARG+HI +THVFNYDLP EDYVHRIGRT RAGASG +IS Sbjct: 299 RDFQEGTVNIVVATDVAARGIHIDGITHVFNYDLPQIAEDYVHRIGRTARAGASGTAISF 358 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLP---------KPLRLTRPRTGNGPRR 410 ACEEY +LP IE ++G IPV ++ +P + + +R R N R Sbjct: 359 ACEEYVYSLPEIEHFLGEKIPVKPIEESLIVDVIPPSDEALDALRNEKESRIRIHNRGNR 418 Query: 411 TGAPRNRRRS 420 ++ RR Sbjct: 419 KPMTKSIRRR 428 >UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=Alphaproteobacteria RepID=C6ATS7_RHILS Length = 580 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 150/389 (38%), Positives = 219/389 (56%), Gaps = 5/389 (1%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T F + ++ L + G TPIQ ++PL L GRD+ G AQTGTGKT AF Sbjct: 21 TLTNFESLGVSKPIIATLFQLGIETPTPIQEHSIPLLLEGRDLIGLAQTGTGKTAAFGLP 80 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 LL+ D + R LI+APTREL QI + + L++ + GG +K Sbjct: 81 LIEKLLADERRPDNRT--TRTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVSINK 138 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q LE G DIL+ T GRL+D + I L A++ +VLDEAD+M DLGF+ D+R + + + Sbjct: 139 QQLQLEKGTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMV 198 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMR 245 P +R MLFSAT+ + +LA E + + +EV P K ++++ + + + + +K Sbjct: 199 P--KKRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVAGKNDKTE 256 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL+ + E RA++F TKH E++ HL G+ V + G+ +Q +R R L F G Sbjct: 257 LLRKSLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHGNKSQGQRERALKAFRDG 316 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 + L+ATDVAARG+ IPAV+HV+NYDLP+ + YVHRIGRT RAG G +I+ + A Sbjct: 317 SIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDEA 376 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLP 394 L IE +G I V+ A ++ P Sbjct: 377 KLLRDIERLMGIDITVASGEAPANISGGP 405 >UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria RepID=DEAD_ECOL6 Length = 629 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 141/386 (36%), Positives = 204/386 (52%), Gaps = 10/386 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 E F+D L ++EAL G+ +PIQA +P L GRDV G AQTG+GKT AF Sbjct: 5 ETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPL 64 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDK 126 L D ++ P+ L++APTRELAVQ+ ++ G+ + YGG YD Sbjct: 65 LQNL-------DPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDV 117 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 QL+ L G I++GT GRL+D+ K+ ++L + +VLDEAD M +GFI+D+ + ++ Sbjct: 118 QLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQI 177 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P + LFSAT+ +R + M + + ++ T I + + K Sbjct: 178 PEGH--QTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEA 235 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L +E E D AIIF TK+ E+ L +G+ L GD+ Q R + L+ G Sbjct: 236 LVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGR 295 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 LDIL+ATDVAARGL + ++ V NYD+P D E YVHRIGRTGRAG +G ++ Sbjct: 296 LDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERR 355 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTD 392 L IE + +IP + L+ Sbjct: 356 LLRNIERTMKLTIPEVELPNAELLGK 381 >UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FQ59_CRYPV Length = 586 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 138/419 (32%), Positives = 200/419 (47%), Gaps = 13/419 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F +V+AL + GF T IQ P+ L+G D+ G A+TG+GKT+ FL Sbjct: 168 TSFVTSGFPNFLVDALYRTGFTEPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAM 227 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ + P + R + P L++APTREL QI A L+ YGG Q Sbjct: 228 IHIRAQPLL--RYGDGPICLVLAPTRELVEQIREQANQFGSIFKLRNTAIYGGVPKRPQQ 285 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + +GV+I I GRLID ++ + NL + +VLDEADRM D+GF IR L ++ P Sbjct: 286 ASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRP 345 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNN-AEYIEVEPEQ--KTGHRIKEELFYPSNEEKMR 245 R +L+SAT V++LA + +I V K H IK+ + EK Sbjct: 346 D--RQTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVVEESEKKA 403 Query: 246 LLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 L+ + + E + +IF TK + + L DG + GD Q++R +L+EF Sbjct: 404 KLKMFLGQVMVESAPKVLIFCETKRGADILTKELRLDGWPALCIHGDKKQEERTWVLNEF 463 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G I++ATDVAARGL I + V N+D P+ EDY+HRIGRTGRAGA+G S+S Sbjct: 464 RTGASPIMIATDVAARGLDIKDINFVINFDFPNQIEDYIHRIGRTGRAGATGVSLSFFTP 523 Query: 363 EYALN---LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 + L + +P + + R N G+ R R Sbjct: 524 DKYRMASDLIKVLKEAKQRVPPELFKLSPQNKRMHPRNTGFRRNNPNSLPLGGSNRAYR 582 >UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y818_9FIRM Length = 556 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 137/378 (36%), Positives = 211/378 (55%), Gaps = 9/378 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF++ L P++ A+ G+ T IQ+ +P+ + G DV GQ+QTGTGKT AF Sbjct: 1 MKFNELNLSPEMSRAIADCGYTEATYIQSACIPVVMNGGDVIGQSQTGTGKTAAFAIPII 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQ 127 L + DRK +P+ALI++PTRELA+Q+ + + G++ YGG KQ Sbjct: 61 EML----EVTDRK--RPQALILSPTRELAMQVCDEIRKFTKYKEGIRTVAVYGGQQISKQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L+ G DI++GT GR++D+ ++ + +V+VLDEAD M ++GF +DI + +P Sbjct: 115 ILELKKGADIVVGTPGRVLDHIRRRTLRFDQCRVLVLDEADEMLNMGFREDIETVIEALP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 QR +LFSAT+ + E+ + N +I+ Q +I++ + E K +L Sbjct: 175 --QQRQTVLFSATMPKPILEITSQYQTNPVHIKTPQTQINTPKIEQVYYVCPKEAKKEIL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 LI + P A+IF NTK +E+ L + G+ L GD+ Q+ R ++D F +G + Sbjct: 233 MQLISMQNPHLAMIFCNTKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDNFKKGKI 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +ILVATDVAARG+ + ++ VFNYDLP + E YVHRIGRTGRAG G +++L Sbjct: 293 NILVATDVAARGIDVDSMDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLITARQKYA 352 Query: 368 LPAIETYIGHSIPVSKYN 385 L +E + Sbjct: 353 LRDLERTTRSKLTQKPLP 370 >UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXV0_BACS4 Length = 500 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 150/397 (37%), Positives = 219/397 (55%), Gaps = 18/397 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D + P +VEA+EK GF TPIQ +PL G+D+ GQAQTGTGKT+AF Sbjct: 4 FKDLNIQPSIVEAIEKMGFEETTPIQEKVIPLGKEGQDIIGQAQTGTGKTVAFGIPCVEQ 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 ++ + P+AL++ PTRELA+Q+ + L + G+K YGG +Q+ Sbjct: 64 VV-------VEEKHPQALVLTPTRELAIQVAEELNKLGQVKGIKALPIYGGQEITRQITA 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ I++ T GR +D+ ++ I +++VVLDEAD M +GFI+DI + + +P Sbjct: 117 LKKRPQIIVATPGRYMDHMRRKTIRPEFLKIVVLDEADEMLSMGFIEDIETILQEVP--G 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +LFSAT+ +++ +A MN I V+ +Q T I++ S +EK L L Sbjct: 175 ERQTLLFSATMPPKLKTIADRFMNKPVSIAVKAKQLTVENIEQRYIALSEKEKFDTLCNL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ E P+ AIIF TK R +E+ L+ G V L GD+ Q++R +++ +F RG +D++ Sbjct: 235 LDMETPELAIIFGRTKRRVDELTESLSIRGFAVEGLHGDMKQERRDQVIRKFKRGSIDVM 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL + V+HV N+DLP D E YVHRIGRTGRAG G S S + +L Sbjct: 295 VATDVAARGLDVNDVSHVINFDLPQDSESYVHRIGRTGRAGKKGISYSFVTHKEKDHLRY 354 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNG 407 IE + D P R R Sbjct: 355 IEESTRQKMK---------QVDAPTLADAMRGRHKQA 382 >UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepID=Q7UG20_RHOBA Length = 931 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 148/392 (37%), Positives = 216/392 (55%), Gaps = 10/392 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L +V +A+ G+ TPIQA +P L GRDV Q+QTGTGKT AF Sbjct: 306 FRDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPILSR 365 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLK 129 + D + +P+ L++APTRELA+Q+ G ++ YGG Y+ QLK Sbjct: 366 V-------DVRSRRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLK 418 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV +++GT GR+ID+ K+ ++LG++ +VLDEAD M ++GF++D++++ + P Sbjct: 419 QLRRGVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEG 478 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 R LFSATL +R++A E +N+ I ++ + T +++ + S +K+ L Sbjct: 479 --RQVALFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFVSPRDKIDALTR 536 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E E D I+F TK + L+ G L GD+ QK R R +D+ RG LD+ Sbjct: 537 ILEVEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQLDV 596 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL +P ++HVFN+DLP D E YVHRIGRTGRAG SG +I L Sbjct: 597 LVATDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLTNAQRRQLR 656 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 IE I + A + + R Sbjct: 657 FIENTTKQPIEIIDIPTVADINEARVRRFKQR 688 >UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0P8_9RHIZ Length = 457 Score = 549 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 148/414 (35%), Positives = 219/414 (52%), Gaps = 7/414 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 +T F F L + AL + TPIQ A+P LAGRD+ G AQTGTGKT AF Sbjct: 1 MTSTTFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 H+L++ +ALI++PTRELAVQI L+E T + + +GG Sbjct: 61 PLLHHLMT--VGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVR 118 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L GVDIL+ T GRL+D +Q I+L + ++LDEADRM D+GF++D+ + + Sbjct: 119 PQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGK 178 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P + R +M+FSAT+ + +L+ + + N + + V P T +I + +F K Sbjct: 179 CP--DDRQSMMFSATMPKPIEDLSKKILTNPQKVSVTPAVVTVEKIAQSVFSVPQRAKKH 236 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L + + R ++F TKH + L G + + G+ +Q R + L F G Sbjct: 237 WLIDFVSKNDTGRIVVFTRTKHGANRLTSDLDKAGIQALAIHGNKSQTARQKALGAFQDG 296 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 ++D+LVATD+ ARG+H+ ++HV N+DLP++ E YVHRIGRT RAG SG +I+L Sbjct: 297 EIDVLVATDIVARGIHVDDISHVVNFDLPEEPESYVHRIGRTARAGRSGQAIALVDPSER 356 Query: 366 LNLPAIETYIGHSIP--VSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNR 417 L I G + + Y + L +L R N R G PRNR Sbjct: 357 AKLKQIIKLTGIDLTPQATDYTVNVLAGELDAD-DGKRRGPRNQQPRNGRPRNR 409 >UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT0_RHORT Length = 799 Score = 549 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 159/416 (38%), Positives = 228/416 (54%), Gaps = 16/416 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+D L P+ + A+E+ G+ TPIQ A+P GRDV G AQTGTGKT +F Sbjct: 1 MTFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMI 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L A K PR+LI+APTRELA Q+ + + L + L GG+ ++Q Sbjct: 61 DIL----ASGKAKARMPRSLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQ 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 KVL+ GVD+LI T GRLID ++ I L ++V+V+DEADRM D+GFI D+ + +P Sbjct: 117 KVLDRGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPK 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R + FSAT+ +R LA + N + + +EP QK +++ L EK L+ Sbjct: 177 I--RQTLFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALR 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ E A IF N K + ++ L+ G + L GD+ Q R L++F R ++ Sbjct: 235 QLLRRETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQ 294 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ++V +DVAARG+ + V+HVFN+D+P EDY+HRIGRTGRAG G + +LA E A L Sbjct: 295 LMVCSDVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYL 354 Query: 369 PAIETYIGHSIP----------VSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 AIE +G +IP + A+ D +P R + R G RR+G Sbjct: 355 RAIENLLGKTIPPDPQLELSDVAVEDVALAVAEDDRRPKRGGKGRPERGARRSGRG 410 >UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcus RepID=Q3AZR1_SYNS9 Length = 458 Score = 549 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 153/420 (36%), Positives = 229/420 (54%), Gaps = 6/420 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 + + F L + V ++++ G+ + TPIQAL +P L G+D+ AQTGTGKT Sbjct: 16 LKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKT 75 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AF+ L + +V+ L++ PTRELA Q+ A A+ + L+ +G Sbjct: 76 AAFILPIIELLRAEDKPKRYQVHS---LVLTPTRELAAQVEASAKAYTKYLALRSDAVFG 132 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Q+K L+ GVDIL+ T GRL+D Q I ++V+VLDEADRM D+GFI+DI+ Sbjct: 133 GVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIK 192 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + +P R NM+FSAT S +++LA +N+ I+ + + I+ + Sbjct: 193 KVIEYLPKN--RQNMMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAPTIEHLVHPCDM 250 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 K+ LL LI+ + ++FA TKH +++ L R + G+ +Q R R L+ Sbjct: 251 ARKVDLLCHLIKTNKWKQVLVFARTKHGADKVVKILCHQHMRASAIHGNKSQGARTRALE 310 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F GD+ ILVATD+AARG+ I + +V N DLP+ EDYVHRIGRTGRAG +GH+ISL Sbjct: 311 GFKNGDIKILVATDIAARGIDIHQLPYVINLDLPNVAEDYVHRIGRTGRAGEAGHAISLV 370 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 E AL L AIE +IG+ +P +PL+ R P ++ P + ++ Sbjct: 371 AAEEALLLKAIEKFIGNPLPKVDVVGFEQKILKAEPLKQGGQRQ-RRPSQSARPGQKAKT 429 >UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eggerthella lenta DSM 2243 RepID=C8WL27_EGGLE Length = 508 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 158/419 (37%), Positives = 223/419 (53%), Gaps = 12/419 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 Q F+D L + A+E+ G+ N TP+Q A+PL L GRD+ A TGTGKT AFL Sbjct: 2 QNFADLGLSEAALAAVERLGYENPTPVQLQAIPLVLEGRDLIAAASTGTGKTAAFLLPIL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L R PR L+++PTRELA QI + TG + +GG Y Q+ Sbjct: 62 STL----PRGKRGKRAPRVLVVSPTRELAQQISQTCMQITRKTGHYVTTVFGGTPYGPQI 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + G D+LI T GRL D + ++LG I+ +VLDEADRM D+GF+ + + P Sbjct: 118 NEIRRGTDVLIATPGRLNDLMNKGVVDLGGIKSLVLDEADRMLDMGFLPAVTTIVDATPA 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R +LFSAT+ + +++ +N+ +E+ +T +++ + +N +K LLQ Sbjct: 178 D--RQTLLFSATIDHSIQKNLGSLLNDPAVVEIARNGETAQTVEQFMMPIANFKKPELLQ 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+EE+ DR I+FA TK+R E+ L G+R + D +Q +R R LD F RG Sbjct: 236 ALLEEKGSDRVIVFARTKNRTEDCAEALCDAGYRAESIHSDKSQGQRKRALDNFRRGRTS 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDV ARG+ +P V HV N+DLPD EDYVHRIGRTGRAG G ++S E + Sbjct: 296 ILVATDVLARGIDVPDVDHVINFDLPDMPEDYVHRIGRTGRAGEQGFAVSFVTRESRRTM 355 Query: 369 PAIETYIGHSIPVSKYNPDAL------MTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 IE IG ++P+ + L P + R GA R+ +R G Sbjct: 356 SDIEKLIGKNVPLMELETYELDMTVLEKGKKGAPKKGGYKGNKGSGRPAGAKRSDKRGG 414 >UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP56_9GAMM Length = 427 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 151/397 (38%), Positives = 221/397 (55%), Gaps = 5/397 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ F++ AL P++ L+ G+ TPIQ+ A+PL L G D+ +AQTGTGKT +F Sbjct: 1 MSASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L +P R RAL++APTRELA+Q+ + G+++ YGG + Sbjct: 61 PIIEKLSKNPIDGYRP---VRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVE 117 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+K L+ G DIL+ T GRL+D +Q I+L ++ +VLDEADRM DLGFI I+ + Sbjct: 118 NQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDY 177 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 A+ R +LF+AT V LA +NN I+V P T +I++ + +K Sbjct: 178 --AADDRQTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQFAYQVDYGQKAD 235 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 +L LI E + ++F TK R +E+ +L +G + G+ +Q++R+R+L+EF G Sbjct: 236 ILSYLITEGKWGQTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAG 295 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 DL +LVATDVAARGL I ++ +V NYDLP+ E YVHRIGRTGRAG +G ++SL Sbjct: 296 DLHVLVATDVAARGLDIESLPYVVNYDLPNQPEAYVHRIGRTGRAGETGEAVSLVAPAER 355 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402 L IE I I + L +P Sbjct: 356 EFLQRIEKLIKQKIKLRPVPRIEDGKRLEIDDFADKP 392 >UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospirillum sp. Group II RepID=A3EUK2_9BACT Length = 444 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 167/415 (40%), Positives = 233/415 (56%), Gaps = 10/415 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L P+++ AL G + TPIQ ++P + GRD+ G AQTGTGKT FL Sbjct: 1 MTFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H + A R + RAL+++PTRELA QIH A+ A+ L GG + +Q Sbjct: 61 HKI----AEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQE 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ DI++ T GRL+D+ ++N++ L +V++DEADRM D+GF+ DI + R++P Sbjct: 117 RNLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPK 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLL 247 R ++LFSAT R++ELA N+A + VEPE+K I +E S+ +K+ LL Sbjct: 177 G--RQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLL 234 Query: 248 QTLIEE--EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 + +++E + IIF TK E++ L G+ L GD +Q R R+L F RG Sbjct: 235 KKVLDEGKSETGQVIIFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLSRFRRG 294 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 DL +LVATDVAARGL I +THV NYDLP EDYVHRIGRTGRAG +G ++S Sbjct: 295 DLKVLVATDVAARGLDIDGITHVINYDLPQTAEDYVHRIGRTGRAGRTGRALSFFHPADR 354 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 + +IET G IP S ++ L K RP G RT NR R+ Sbjct: 355 DIVRSIETMAGKPIPHSPHSIPLSEQSLRKTFT-RRPSFGRPQDRTPRGENRFRT 408 >UniRef50_A0LLL9 DEAD/DEAH box helicase domain protein n=2 Tax=Deltaproteobacteria RepID=A0LLL9_SYNFM Length = 533 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 183/426 (42%), Positives = 256/426 (60%), Gaps = 9/426 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + +F D L ++ + F CTPIQA LP TL G D AG+AQTGTGKT Sbjct: 110 DPEEGKTRFHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLDAAGRAQTGTGKTAV 169 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F+ + L +PA R+ PRAL++APTRELA+QI + L+ T K +GG Sbjct: 170 FIITMLTQFLRNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPFKSVAIFGGM 229 Query: 123 GYDKQLKVLESGV-DILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y+KQ + L V DI++ T GRL+D+ +Q ++L ++++V+DEADRM D+GFI D++ Sbjct: 230 DYEKQKRRLTGEVIDIVVATPGRLLDFKRQGDLHLSKVEILVIDEADRMLDMGFIPDVQR 289 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + PP QR MLFSATL+ V A + N +E+EPEQ + + + + + Sbjct: 290 IIHYTPPKAQRQTMLFSATLTAEVTRFASQWTRNPVTVEIEPEQVAVDTVNQRVLITTID 349 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 EK LL +I + DR I+F N + + + L + G LL+G+V QKKR++ L+E Sbjct: 350 EKFTLLFNMITRQNLDRVIVFTNRRDQARRLTERLGSYGISCALLSGEVDQKKRVKTLEE 409 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +LVATDVAARGLH+ AV+HVFNY++P D EDYVHRIGRTGRAG SG S+S A Sbjct: 410 FRNGKIRVLVATDVAARGLHVEAVSHVFNYNMPMDPEDYVHRIGRTGRAGTSGISVSFAS 469 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPK----PLRLTRPRTGNGPRRTGAPRN- 416 E+ + +PA+E Y+GH I + D L T LP+ P+ RPR GP R PR+ Sbjct: 470 EDDSFLIPALEKYLGHEIHCEHPDEDMLET-LPEPTHTPVAAERPRRS-GPYRGRNPRST 527 Query: 417 -RRRSG 421 RR++G Sbjct: 528 GRRKTG 533 >UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0M4_9GAMM Length = 582 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 154/401 (38%), Positives = 206/401 (51%), Gaps = 11/401 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS +F+ L + E L+ G+ TPIQA +PL L GRDV G AQTGTGKT Sbjct: 1 MSTPDTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAY 119 AF + D KV P+AL++ PTRELA Q+ G L++ + Sbjct: 61 AAFALPILANI-------DVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIF 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG +QLK L G I++ T GRL+D+ ++ I+L I VVLDEAD M +GFI D+ Sbjct: 114 GGADMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDV 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + P +R LFSAT+ RVR++A + ++N I V T I++ + Sbjct: 174 DTILAKTP--KERKVALFSATMPKRVRDIANKHLSNPAEISVAAAATTNENIEQCYWLAK 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ L+ L+ E + I+F T+ I L G + L GD+ QK RLR + Sbjct: 232 GASKLEALKRLLAFEDTEGVIVFTRTRESTTVIAEQLRQTGLKASPLNGDMDQKMRLRTV 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + G LD+LVATDVAARGL + +THV NYD+P D E YVHRIGRTGRAG G +I Sbjct: 292 SDLKSGALDVLVATDVAARGLDVERITHVINYDVPFDEEAYVHRIGRTGRAGRKGKAILF 351 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 L IE SIP K P L D + Sbjct: 352 VVPRERRMLRNIERLTRQSIPEIKL-PSVLAIDAKRREAFA 391 >UniRef50_Q9VHP0 ATP-dependent RNA helicase bel n=13 Tax=Eukaryota RepID=DDX3_DROME Length = 798 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 135/394 (34%), Positives = 197/394 (50%), Gaps = 20/394 (5%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 F D L + + + TP+Q A+P+ + GRD+ AQTG+GKT AFL Sbjct: 293 NITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVP 352 Query: 67 TFHYLLSHPAIAD--------RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLA 118 + + + R+ P L++APTRELA QI +A+ A + ++ + Sbjct: 353 ILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVL 412 Query: 119 YGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKD 178 YGG+ +Q++ L+ G +++ T GRL D + + L I+ +VLDEADRM D+GF Sbjct: 413 YGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQ 472 Query: 179 IRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 IR + + MPP QR ++FSAT +++ELA + ++N ++ V T I + + Sbjct: 473 IRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTIL 532 Query: 237 YPSNEEKMRLLQTLI-------EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGD 289 + +K L L+ E +IF TK + + L H V + GD Sbjct: 533 WVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGD 592 Query: 290 VAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGR 349 QK+R L F GD ILVAT VAARGL IP V HV N+DLP D E+YVHRIGRTGR Sbjct: 593 RTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 652 Query: 350 AGASGHSISLACEEYALNLPAIETYI---GHSIP 380 G G + S E+ + + IP Sbjct: 653 MGNLGVATSFFNEKNRNICSDLLELLIETKQEIP 686 >UniRef50_A8REA9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8REA9_9FIRM Length = 572 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 129/385 (33%), Positives = 208/385 (54%), Gaps = 9/385 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F++ + ++ A+ + G+ T IQA A+P + G+DV G++ TGTGKT AF Sbjct: 2 TTFNELHISEAILRAVSEMGYEQATEIQAKAIPYIMEGKDVLGRSNTGTGKTAAFGIPAI 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQ 127 + A+ ALI+ PTREL Q+ + ++ G+K+ YGG ++Q Sbjct: 62 EMVQPQDKYAN-------ALIICPTRELVTQVAMELRKFSKYKEGVKIVPIYGGQPIERQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 +++L+ G I++GT GR++D+ ++ + L I++V+LDEAD M ++GF +DI + MP Sbjct: 115 IQLLKRGCGIVVGTPGRIMDHLRRRTLKLSDIRMVILDEADEMLNMGFKEDIEEILSLMP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +LFSAT + +A E N+ +E++ Q+T +++ + +K L Sbjct: 175 SERSYQTILFSATWPSEIMRIAKEFQNDPVTVEIKSAQRTIDTVEQLYYEVPRGKKANAL 234 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + L+ P+ +IFANTK +E+ G L + L GD+ Q+ R R++++F G + Sbjct: 235 RVLLNHYDPELCMIFANTKKMVDELQGELNKHDIKACALHGDMKQEFRSRVMEQFRSGSM 294 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC-EEYAL 366 IL+ATDVAARG+ + V V N+D+P D E Y+HRIGRTGRAG G +I+L Sbjct: 295 PILIATDVAARGIDVDDVDLVINFDIPQDNEYYIHRIGRTGRAGKKGLAITLISGGRQRS 354 Query: 367 NLPAIETYIGHSIPVSKYNPDALMT 391 L I Y +I A M Sbjct: 355 ELKNIMRYTKTNIKHHALPTSAQMQ 379 >UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria RepID=Q2NB74_ERYLH Length = 492 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 155/421 (36%), Positives = 218/421 (51%), Gaps = 10/421 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 +T F L V++AL+ KG++ TPIQA A+P L GRD+ G AQTGTGKT AF+ Sbjct: 1 MTITTFDQLGLSQPVLQALDMKGYNEPTPIQAQAIPPVLEGRDLLGIAQTGTGKTAAFML 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + L A R L++APTRELA QI A+ GLK+ GG Sbjct: 61 PSIDRL--READNQTPFKSCRMLVLAPTRELAGQIAQSAKDYGAMAGLKVHSIVGGTSVG 118 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 K L G DIL+ T GRL+D Q L A++++VLDEAD+M DLGFI +R + Sbjct: 119 KDRNKLHRGTDILVATPGRLLDLIDQKAFKLNAVEILVLDEADQMLDLGFIHALRQINDL 178 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P +R + FSAT+ +++EL + N + V P T RI + LF +EK Sbjct: 179 VPA--ERQTLFFSATMPKQIQELVGKYCRNPVKVSVTPAATTAERIDQYLFMVQQDEKQA 236 Query: 246 LLQTLIEEE-----WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 L++ +++ +R ++F TKH + + L G + G+ +Q +R R LD Sbjct: 237 LIEMILKGRHAVPGKQERILVFTRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRALD 296 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 EF R IL+ATDVAARG+ IP V+HV NY+LP+ E YVHRIGRT RAG G +I+ Sbjct: 297 EFKRAKTPILIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIAFC 356 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 E+ L I+ P+ + R + GPR P+ R++ Sbjct: 357 AEDERAYLKDIQKNTDAEFDRLPL-PENFRAVVEGVGPTKREQKQRGPRIKPKPKARKQG 415 Query: 421 G 421 G Sbjct: 416 G 416 >UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Rhodopirellula baltica RepID=Q7UJ92_RHOBA Length = 485 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 144/402 (35%), Positives = 216/402 (53%), Gaps = 11/402 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF D L +++ LE+ G+ TPIQA ++P L G DV G AQTGTGKT AF Sbjct: 2 NKFEDLGLTGPLLQGLEQAGYETPTPIQAQSIPEILDGNDVLGAAQTGTGKTAAFALPIL 61 Query: 69 HYLLSHPAIADRKVNQPR---------ALIMAPTRELAVQIHADAEPLAEATGLKLGLAY 119 + + L+++PTREL+ QI A+ + T L+ + + Sbjct: 62 QIMWEDDQERREPSKRRGGRPGRRPIRTLVLSPTRELSAQIEANFRIYGKKTRLRSTVIF 121 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG + Q++ L+SGVD L+ T GRL+D Q I+L ++++VLDEAD M D+GF+ D+ Sbjct: 122 GGVNQNPQVRELQSGVDTLVATPGRLLDLVNQGFIDLKDVEILVLDEADHMLDMGFLPDV 181 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + + +P R N+LFSAT+ +R+LA E + + I++ P++ T RI++ + + + Sbjct: 182 KRILKFLP--RDRQNLLFSATMPGPIRKLADEILVDPVTIQIAPQKPTVERIEQSICFVA 239 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K RLL IE + ++F TKH + + L G + + G+ Q R+R L Sbjct: 240 QADKPRLLNHFIETKATGSTLVFTRTKHGADAVARRLVKAGVKAAAIHGNKTQANRVRTL 299 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 ++F +LD+LVATDVAARG+ I + V NYD P+ E YVHRIGRTGRAG G ++ Sbjct: 300 NKFKNDELDVLVATDVAARGIDIDGIQTVINYDTPNTPEAYVHRIGRTGRAGREGETVMF 359 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 AIE I IPV+ P L P + Sbjct: 360 CGGHETKFFIAIEREIKLQIPVATGLPGCQPRPLQDPESGDK 401 >UniRef50_C4Q2M5 DEAD box ATP-dependent RNA helicase, putative n=2 Tax=Schistosoma mansoni RepID=C4Q2M5_SCHMA Length = 879 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 130/380 (34%), Positives = 199/380 (52%), Gaps = 8/380 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KFS+ ++ ++K + + TPIQ P+ L+GRD+ G AQTG+GKT +FL Sbjct: 78 KFSEAGFPSYIMSVIKKSKWDSPTPIQCQGWPVALSGRDLVGIAQTGSGKTASFLLPAIV 137 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + + P++ ++ + P LI+ PTRELA Q+ AE + G K YGG Q + Sbjct: 138 HAKAQPSL--KRGDGPIVLILVPTRELAQQVEKVAEDFCYSAGFKSACLYGGASRTGQAE 195 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L +++I T GRL+D+ + H N+ +VLDEADRM D+GF IR + ++ P Sbjct: 196 ALGQSPEVVIATPGRLLDFLESRHTNMRRCTYLVLDEADRMLDMGFEPSIRRVVSQVRPD 255 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLLQ 248 R +++SAT V+ LA + + + I V + H I++ + + EK + L Sbjct: 256 --RQTLMWSATWPREVKALAEDFLYDYIQINVGSTKLSANHNIRQHVEILNESEKFKRLL 313 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +L+ R ++F TK R +E+ L G + GD QK+R R LD F G + Sbjct: 314 SLLNSFDNARVLVFTETKKRTDELCQKLQDKGFDATAMHGDKHQKERDRALDMFREGHIS 373 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY---A 365 +LVATDVA+RGL I V ++ NYD P EDY+HRIGRTGR+ G + + + A Sbjct: 374 VLVATDVASRGLDINDVRYIINYDYPSQTEDYIHRIGRTGRSDKKGTAYTFFSAKQPRLA 433 Query: 366 LNLPAIETYIGHSIPVSKYN 385 L + +IP + Sbjct: 434 RELIEVLKEARQTIPDELFK 453 >UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=Deltaproteobacteria RepID=B5EAF1_GEOBB Length = 471 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 139/386 (36%), Positives = 212/386 (54%), Gaps = 9/386 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F F LHPKV +E G+ TPIQ A+P ++G+DV G AQTGTGKT AF H Sbjct: 3 FKQFNLHPKVQAGIEAMGYVTPTPIQLQAIPSVISGQDVLGLAQTGTGKTAAFGLPMLHR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L+ + R L++APTRELA QI+ + + T L+ YGG + Q+K Sbjct: 63 LVQ------EERGHVRGLVLAPTRELAEQINDALNGMGKQTRLRSVTVYGGVNINTQIKK 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ G +I++ GRL+D+ Q I+L ++++VLDEAD+M+D+GF+ D+R + R +P Sbjct: 117 LKEGAEIVVACPGRLLDHISQGTIDLSRVEILVLDEADQMFDMGFLPDVRKILRALP--G 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R N++FSAT+ +R LA E + N ++V + L+ K LL + Sbjct: 175 KRQNLMFSATMPDDIRRLAHEILRNPVTVQVSR-TAPAATVSHALYPVGQHLKTPLLFEM 233 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ + +IF TKHR + + L G++ L G+++Q +R LD F G I+ Sbjct: 234 LKHTDTESVLIFTKTKHRAKRVGEQLEKAGYKATSLQGNLSQNRRQAALDGFRDGTFQIM 293 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ + ++HV NYD+PD E Y HRIGRTGRA +G + ++ E + + Sbjct: 294 VATDIAARGIDVSLISHVINYDIPDTPEAYTHRIGRTGRAAKTGDAFTMVTSEDDYTVRS 353 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKP 396 IE +G I + P+ Sbjct: 354 IEKVLGTKIERRRIEGFDYAVPAPQK 379 >UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desulfotalea psychrophila RepID=Q6AMK6_DESPS Length = 632 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 212/369 (57%), Gaps = 9/369 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+DF L +V L K GF TPIQ A+PL LAG D+ GQAQTGTGKT AF + Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + D +AL++APTRELA Q+ + G + + YGG Y Q+ Sbjct: 117 I-------DFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGG 169 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L G +++GT GRL+D +Q + L ++ +VLDEAD M +GFI DI + + P Sbjct: 170 LRRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTP--K 227 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R MLFSATLS RV +A +++ E I + P+Q G I++ + +N +K+ + + Sbjct: 228 DRQTMLFSATLSSRVMSIANRYLHSPESISISPKQMIGSSIEQRYYLINNSDKIAAITRV 287 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 E E + A+IFA T+ E+ L + G L+GD++Q+ R R+L F +G + +L Sbjct: 288 FEVETVESALIFARTRATVSELANELISRGFAAEGLSGDLSQEARTRVLSRFKKGQIKVL 347 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL I ++HVFNYDLP+D E YVHRIGRTGRAG SG +ISL Sbjct: 348 VATDVAARGLDIDDISHVFNYDLPEDPEVYVHRIGRTGRAGRSGTAISLVTLRDRWMHRR 407 Query: 371 IETYIGHSI 379 IE Y G + Sbjct: 408 IEQYTGKKL 416 >UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular organisms RepID=Q46G62_METBF Length = 579 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 140/392 (35%), Positives = 211/392 (53%), Gaps = 13/392 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGR-DVAGQAQTGTGKTMAFLTSTF 68 KF L +++AL+KKGF TPIQ +PL L G D+ GQAQTGTGKT AF Sbjct: 6 KFKALGLSDSMLKALKKKGFEEPTPIQEKVIPLFLKGECDIIGQAQTGTGKTTAFGAPII 65 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + K + +A+++ PTRELA+Q+ + L L + YGG +Q Sbjct: 66 EKI-------PEKSGKVQAIVLTPTRELAIQVSEELNSLKGDKKLHIVPIYGGQSMTQQF 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 ++L+SGVDI++GT GR+ID+ ++ +NL I VLDEAD M ++GFI DI+ + + P Sbjct: 119 RMLKSGVDIVVGTPGRVIDHLERKSLNLENIAYFVLDEADEMLNMGFIDDIKEILKATGP 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + + FSAT+ + + + M N EY+ ++ E + ++ F +K L Sbjct: 179 DKR--MLFFSATMPKPILGIIKKHMKNYEYVAIKKEDLDVNLTEQIYFEVKESDKFEALC 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +I+ E ++F TK ++ L G+ L GD++Q++R +IL+ F + ++ Sbjct: 237 RIIDIEDEFYGLVFCRTKTDTSQLAQKLGDRGYAADALHGDLSQREREKILNRFRKQKIN 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARG+ I +THV NY LP D E YVHRIGRTGRAG G +I+ L Sbjct: 297 ILVATDVAARGIDIMDLTHVINYSLPQDPESYVHRIGRTGRAGKQGTAITFVTSTEYRRL 356 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 I+ ++ + + D+ K R Sbjct: 357 TYIKKTSKSAMKRGRIPE---IKDVIKAKRAR 385 >UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=Viridiplantae RepID=RH40_ORYSJ Length = 792 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 133/420 (31%), Positives = 214/420 (50%), Gaps = 13/420 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F P++++ +++ GF + TPIQA + P+ L +DV A+TG+GKT+ +L F Sbjct: 150 TSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGF 209 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ + + + P L++APTRELA QI +A ++ + YGG QL Sbjct: 210 MHI---KRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQL 266 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ GVD+++ T GRL D + I+L + +VLDEADRM D+GF IR + + +PP Sbjct: 267 RDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPP 326 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSNEEKMRL 246 +R ++++AT VR +A + + + + + E I + + + EK+R Sbjct: 327 --RRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRR 384 Query: 247 LQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ ++ + + +IF TK C+++ L + GD +Q +R ++L F G Sbjct: 385 LEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSG 443 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY- 364 ILVATDVAARGL I + V NYD P EDYVHRIGRTGRAGA+G + + C++ Sbjct: 444 RSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDS 503 Query: 365 --ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG-APRNRRRSG 421 A +L I +P + + + R+ G + R R G Sbjct: 504 KYAADLIKILEGANQRVPRDLADMASRGGRGGRKRNRWATRSDRGGSHSELDSRYGGRDG 563 >UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D1B4W7_SULD5 Length = 583 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 135/373 (36%), Positives = 213/373 (57%), Gaps = 10/373 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 Q F F LH +++A+ + GF +P+QA A+PL L G D+ QAQTGTGKT AF T Sbjct: 2 QTFESFGLHQDILKAINEAGFTEPSPVQAEAIPLVLQGHDIVAQAQTGTGKTAAFGLPTM 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + D N+ + L++ PTRELA Q+ + L G+K YGG Y +Q+ Sbjct: 62 SMI-------DANQNRVQLLVITPTRELATQVSDELYSLGRFCGIKTVTIYGGSSYSRQI 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 ++E G +++ T GR++D K + A ++VVLDEAD M D+GF++DI +F +P Sbjct: 115 GLIEKGASVIVATPGRMLDLLKNGRLPGFAPKMVVLDEADEMLDMGFLEDIEEIFTYLP- 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLL 247 +R +LFSAT+ ++ LA + ++ +++ + P + T I++ + + E+ + Sbjct: 174 -KERQTLLFSATMPEPIKRLASKILHEPKFVSITPKDHTTNEDIEQLYYVINEYERDDAM 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ P+++I+F TK + + L A G+ L GD+ Q +R ++ F + Sbjct: 233 IRLLDALEPEKSIVFCRTKKEVDRLSTQLMAVGYAAKGLHGDMEQNQRESVIKAFRSSQI 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +ILVATDVAARGL++ ++HVFNY +P D E YVHRIGRTGRAG G +I+L + Sbjct: 293 EILVATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVTPIEFHS 352 Query: 368 LPAIETYIGHSIP 380 + I +G I Sbjct: 353 MQRIGKKVGSKIE 365 >UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box protein A) n=2 Tax=Bacteria RepID=Q11UP8_CYTH3 Length = 580 Score = 547 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 148/392 (37%), Positives = 227/392 (57%), Gaps = 10/392 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L P+VVEA+E G+ TPIQ +P+ + G+D+ GQAQTGTGKT AF + Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLK 129 + D +NQ ++LI+ PTRELA+Q+ + + L++ GL++ YGG+ ++Q++ Sbjct: 63 V-------DISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIR 115 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L++G I++GT GR+ID+ + +N + ++LDEAD M ++GF +DI + R+P Sbjct: 116 DLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPE- 174 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSATL+ + LA NN E I++E ++ T +++ + N +K ++ Sbjct: 175 -ERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFYYLVKNSQKTEIVTQ 233 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 +I+ +IF NTK + EE+ L A GH L GD Q+ R ++ +F +G +I Sbjct: 234 IIDLNNLQLMLIFCNTKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLANI 293 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARG+ + V V NYD+P D E+YVHRIGRTGRAG G S +L + L Sbjct: 294 LVATDVAARGIDVTGVDAVINYDVPLDIENYVHRIGRTGRAGQLGKSFTLVTSDEKYKLR 353 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 IE Y +I ++ + K TR Sbjct: 354 DIERYTKATIEKAETPTRQELVAYKKDKLATR 385 >UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5V0_9RHOB Length = 453 Score = 547 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 146/410 (35%), Positives = 217/410 (52%), Gaps = 9/410 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + AL+ KG+ TPIQ A+P L G+D+ G AQTGTGKT AF Sbjct: 2 TDFDKLGVAKPFQIALKSKGYSEPTPIQENAIPYILDGKDLLGLAQTGTGKTAAFAVPLL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LL A K R+LI+ PTRELA QI + + A T + GG + Q Sbjct: 62 QRLLESRYRAAPKS--VRSLILTPTRELADQITKNIKAYAGRTKMYTSCVVGGVPFPPQF 119 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L+ G+D+L+ T GRL+D ++N ++ +++ VLDEAD+M DLGFI ++ + +P Sbjct: 120 HALQRGLDVLVATPGRLLDLHRKNGVSFDELEIFVLDEADQMLDLGFIAELEEIAYLLP- 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R + FSAT+ +R+L+ + N + P T + +++ + + K LL+ Sbjct: 179 -KKRQTLFFSATMPREIRDLSERFLTNPVEVSTAPPATTVETVTQQIAHLEKDAKFPLLK 237 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+E++ +RA++F TK + L ADG + GD++Q +R + LD+F RG L Sbjct: 238 ELLEKDECERALVFTLTKKGSARLAARLNADGVPAEAIHGDMSQAERQKTLDKFKRGKLK 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 LVATDVAARG+ + ++HV N+D+P+ E+YVHRIGRT RAG SG +I+ E L Sbjct: 298 TLVATDVAARGIDVSDISHVINFDMPNATENYVHRIGRTARAGKSGTAITFCLPEDRGML 357 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLR-----LTRPRTGNGPRRTGA 413 AI+ IG I PK R + G+GPR+ Sbjct: 358 RAIQKLIGKKIAEMDGFTFFPSDREPKSARSNAQVAGKRAKGSGPRKGPG 407 >UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=B8J1L5_DESDA Length = 595 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 139/377 (36%), Positives = 204/377 (54%), Gaps = 11/377 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + L ++++A+E GF +PIQ LA+P LAG D GQAQTGTGKT AF Sbjct: 4 SFEELGLSRELLKAVEDMGFEEPSPIQVLAVPCLLAGNDAFGQAQTGTGKTAAFGLPILD 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQL 128 L +ALI+ PTRELA+Q+ + LA G+ + YGG ++QL Sbjct: 64 KL--------TPERNTQALILCPTRELAIQVAEELNKLAAHKRGVAILPIYGGQPIERQL 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GV +++GT GR++D+ K+ + L + VLDEAD M D+GF +DI + + P Sbjct: 116 RALAKGVQVVVGTPGRVMDHLKRGTLRLSQASMAVLDEADEMLDMGFREDIEAILEQTPA 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + QR +LFSAT+ +REL+ + E + V + T I++ + +KM L Sbjct: 176 SCQR--VLFSATVPPAIRELSKRFLREPEMLTVAQKMLTVPAIEQIYYEVRPHQKMDALC 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L++ +A++F +TK +E+ HL G++ L G++AQ +R R++ F LD Sbjct: 234 RLLDSRAFHKALVFCSTKRGADEVTTHLQQRGYQSDSLHGNLAQSQRDRVMQRFRAEGLD 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGL + V V NYD+P D E YVHRIGRTGRAG G + + + Sbjct: 294 VLVATDVAARGLDVDDVDAVINYDIPHDVEKYVHRIGRTGRAGRVGSAFTFVTMREHYKM 353 Query: 369 PAIETYIGHSIPVSKYN 385 I I + Sbjct: 354 RDIIRCTRARITEGRLP 370 >UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gruberi RepID=D2V713_NAEGR Length = 629 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 150/384 (39%), Positives = 213/384 (55%), Gaps = 15/384 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L PK+++ +E+ GF TP+Q ++P+ LAGRD+ AQTG+GKT AFL Sbjct: 154 FKEANLPPKLMQNIERAGFGKPTPVQKHSIPIVLAGRDLLSCAQTGSGKTCAFLFPIISN 213 Query: 71 LLSHP---------AIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 L++ P + D V P LIMAPTREL+ QI+ ++ TG + +AYGG Sbjct: 214 LMTQPGYETVMPHPELMDTLVTCPSVLIMAPTRELSTQIYDESRKFTYHTGRRTVVAYGG 273 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 QLK LE G DIL+ T GRL+D + I+L +Q +VLDEADRM D+GF IR+ Sbjct: 274 AAIQYQLKQLERGCDILVATPGRLVDLIDRGSISLHNVQYLVLDEADRMLDMGFEPQIRY 333 Query: 182 LFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + MP QR+ ++FSAT ++ LA + ++N + V T I ++ Y Sbjct: 334 IVEKTGMPAPGQRITLMFSATFPKNIQTLARDFLHNNLNLTVGRVGSTHENILQKFVYCK 393 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 ++EK L+ I ++F TK + L +G + + GD Q++R L Sbjct: 394 DDEKRDLMLEAIASVE-TLTLVFVKTKKEASILEYFLMKNGFKSSSIHGDKTQRERETAL 452 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F RG ILVATDVA+RGL I V HV NYDLP++ EDYVHRIGRTGRAG +G S S Sbjct: 453 ENFRRGITPILVATDVASRGLDINDVGHVINYDLPENIEDYVHRIGRTGRAGNTGISTSF 512 Query: 360 ACEEY---ALNLPAIETYIGHSIP 380 ++ A +L + +P Sbjct: 513 FTDKNNQIADDLITVLEEAKQEVP 536 >UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms RepID=C7JBN9_ACEP3 Length = 636 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 149/422 (35%), Positives = 211/422 (50%), Gaps = 10/422 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F+D L ++ A+ G+ + TPIQ A+P L RDV G AQTGTGKT + Sbjct: 149 TEDTNSVTFADLELSEPILRAISDMGYTHPTPIQEQAIPAILMARDVMGVAQTGTGKTAS 208 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F L A + PR+LI+ PTRELA+Q+ + + L L GG+ Sbjct: 209 FTLPMLEILSDSRA----RARMPRSLILEPTRELALQVAENFVNYGKYLKLNHALLIGGE 264 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q +VL GVD+LI T GRL+D ++ + L ++V+DEADRM D+GFI DI + Sbjct: 265 SMADQKEVLNRGVDVLIATPGRLLDLFERGGLMLNHTGILVIDEADRMLDMGFIPDIEKI 324 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 +PP R +LFSAT++ +R+LA +++ + I V + I + Sbjct: 325 VGLLPPN--RQTLLFSATMAPTIRKLADAFLHSPKEITVARQSSVATTITTGIVVVDEYS 382 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K L+ L+++ AI+F N K + + L G L GD+ Q R L++F Sbjct: 383 KRETLRQLLKDPALQNAIVFCNRKRDVDILTKSLVKHGFSAAALHGDLPQSVRFSTLEKF 442 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 +L +LV +DVAARG+ I ++HVFN+DLP EDYVHRIGRTGRAG GH+ S+A Sbjct: 443 KNDELKVLVCSDVAARGIDIGGLSHVFNFDLPFHAEDYVHRIGRTGRAGREGHAYSIATP 502 Query: 363 EYALNLPAIETYIGHSIPVSKYNP----DALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 AIE G IP + + P R +PRT R P R Sbjct: 503 YDKALAEAIEKLTGKEIPRMALDGVKQLEWSDEKRPPAGRTRKPRTPQRERENAVPTPRE 562 Query: 419 RS 420 + Sbjct: 563 QQ 564 >UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Tetrahymena thermophila RepID=Q24I45_TETTH Length = 713 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 138/383 (36%), Positives = 214/383 (55%), Gaps = 11/383 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 ++D ++ + F +PIQ+LA P+ L+G D+ G A+TG+GKT++FL + Sbjct: 102 SWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSIV 161 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 ++ + P + +K + P L++APTRELA+QI ++E +++ LK YGG Q Sbjct: 162 HINAQPTV--KKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRA 219 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 +L+ GVD++I T GRLID+ + L + +VLDEADRM D+GF IR + ++ P Sbjct: 220 LLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPD 279 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNN-AEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLL 247 R ++FSAT V+ LA + N Y+++ E RIK+ ++ +K+ L Sbjct: 280 --RQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQL 337 Query: 248 QTLIE-EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 ++ D+ +IFA TK CE + L +G + + GD AQK R ++++F G+ Sbjct: 338 IKQLDCLTQKDKVLIFAQTKKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGE 397 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 IL+ATDVA+RGL + V+HVFNYD P EDYVHRIGRTGRAGA G ++S E Sbjct: 398 CRILIATDVASRGLDVKDVSHVFNYDFPKVMEDYVHRIGRTGRAGAYGCAVSFLTFEDDK 457 Query: 367 NLP----AIETYIGHSIPVSKYN 385 + + IP+ + Sbjct: 458 KISREYVQMLHDAKQEIPIDLLD 480 >UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MN05_CRYCD Length = 551 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 156/412 (37%), Positives = 216/412 (52%), Gaps = 8/412 (1%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F D L K + A++ G+ + TP+Q A+P LAGRDV A+TGTGKT AF T Sbjct: 2 SKTFHDLGLSEKALAAVDLLGYTDPTPVQEQAIPAVLAGRDVIAAAKTGTGKTAAFSLPT 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L R P LI+ PTRELA+QI + +A+ +G ++ GG Y+ Q Sbjct: 62 MDRL-----GHARHGQGPLLLIVTPTRELALQIESVCRTIAKRSGHRVTCVVGGVSYNPQ 116 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L G D+LI T GRLID Q+ +L ++ +VLDEADRM D+GF+ D+R + P Sbjct: 117 IDSLRRGTDVLIATPGRLIDLMNQDAAHLNQVETLVLDEADRMLDMGFLPDMRRIVAACP 176 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 QR +LFSAT+ + + +NN ++E+ +T I++ + K LL Sbjct: 177 T--QRQTLLFSATIDSAIEDNMAHLLNNPVFVEIAHRGETADTIEQYRIPVDHRHKNDLL 234 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+ E R I+FA T+HR + L G V + D +Q +R R ++ G Sbjct: 235 IALLNERGGTRIIVFARTRHRVDTCVRKLRKAGFAVEPIHSDRSQNQRKRAIEALEAGKC 294 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 DILVATDV ARG+ IP V +V N D+PD EDYVHRIGRTGRAG +G +IS E Sbjct: 295 DILVATDVLARGIDIPNVNYVVNLDMPDQVEDYVHRIGRTGRAGEAGCAISFVTPENKAI 354 Query: 368 LPAIETYIGHSIPVSKYN-PDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 L I+ IG IP D+ +D + TR N P A R + Sbjct: 355 LRDIQKLIGKDIPEMSVESFDSSASDNALAAKATRANAQNDPELATAAREDK 406 >UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=2 Tax=Magnoliophyta RepID=B9SM44_RICCO Length = 650 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 137/390 (35%), Positives = 211/390 (54%), Gaps = 18/390 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F++ L + + + + TP+Q A+P++L GRD+ AQTG+GKT AF Sbjct: 188 NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPII 247 Query: 69 HYLL------SHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 ++ + + ++ P ALI++PTREL++QIH +A + TG+K+ +AYGG Sbjct: 248 SGIMKMQGQSAQRPLRGARMVYPLALILSPTRELSMQIHEEARKFSYQTGVKVVVAYGGA 307 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 ++QL+ LE GVDIL+ T GRL+D ++ ++L ++ + LDEADRM D+GF IR + Sbjct: 308 PINQQLRELERGVDILVATPGRLVDLLERARVSLQMVRYLALDEADRMLDMGFEPQIRKI 367 Query: 183 FRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + MP R MLFSAT ++ LA + + N ++ V + I + + + Sbjct: 368 VEQNDMPRPGARQTMLFSATFPKEIQRLATDFLFNYIFLAVGRVGSSTDLIIQRVEFVQE 427 Query: 241 EEKMRLLQTLIEEEWPD-------RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQK 293 +K L L+ + + ++F TK + + L +G + GD +Q+ Sbjct: 428 SDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLYVNGFPATSIHGDRSQQ 487 Query: 294 KRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGAS 353 +R + L F G+ ILVATDVAARGL IP V HV N+DLP+D +DYVHRIGRTGRAG S Sbjct: 488 EREQALRSFRSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 547 Query: 354 GHSISLACEEYALN---LPAIETYIGHSIP 380 G + + E A L + +P Sbjct: 548 GLATAFFNEGNASLAMALADLMQESNQEVP 577 >UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=Bacteria RepID=B8FPB9_DESHD Length = 428 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 143/405 (35%), Positives = 211/405 (52%), Gaps = 5/405 (1%) Query: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYL 71 ++ + + +AL +G+ TPIQA A+P L G D+ G AQTGTGKT AF L Sbjct: 7 NELKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSL 66 Query: 72 LSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVL 131 + K Q RAL++APTRELA QI L+ + +GG G Q + L Sbjct: 67 AMGQGLLKGK-RQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKL 125 Query: 132 ESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQ 191 E G+DIL+ T GRL+D Q I+L ++ VLDE D+M D+G + D++ + +P + Sbjct: 126 EKGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLP--RE 183 Query: 192 RLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLI 251 R NMLFSAT+ + +LA + I + PE I++E+++ K LL + Sbjct: 184 RQNMLFSATMPVEIEKLADTILKGPVKIAMTPEFSPLDIIEQEVYFVDKANKAALLTYWL 243 Query: 252 EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILV 311 + D ++F+ TKH ++I L G + G+ +Q R + L F + ILV Sbjct: 244 KNNEYDSVLVFSRTKHGADKIVKELNKKGFTAVAIHGNKSQANREQALHAFKKRKTRILV 303 Query: 312 ATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAI 371 ATD+AARGL I ++HV NY+LP+ E Y+HRIGRTGRAG G +I+ E L I Sbjct: 304 ATDIAARGLDIQELSHVINYNLPEVPETYIHRIGRTGRAGLGGKAITFCDFEEKPLLRDI 363 Query: 372 ETYIGHSIPVSKYNPDALMTD--LPKPLRLTRPRTGNGPRRTGAP 414 + IG ++P K +P L+ +PK + + A Sbjct: 364 QKRIGKTLPEVKEHPYPLVNTVIVPKAKTSQQAAAARPQKPATAK 408 >UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LND0_DESBD Length = 545 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 166/410 (40%), Positives = 236/410 (57%), Gaps = 9/410 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L ++++A++ KG+ T IQA A+P+ LAGRD+ +AQTGTGKT AF Sbjct: 1 MSFDQLGLRVELLKAIKNKGYEAPTAIQAQAIPVILAGRDILARAQTGTGKTDAFGLPIV 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + + PRALI+ PTRELA+Q+ + A L+ +A+GG + Q+ Sbjct: 61 QIL----GLTRGNGHHPRALILTPTRELALQVGESIKAYARKVSLRCTVAFGGVRIEPQI 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 LE G+DIL+ T GRL+D A Q H++L +I+ +V DEADRM DLGF +I + +P Sbjct: 117 ARLERGIDILVATPGRLLDLASQEHLSLASIEFLVFDEADRMLDLGFSGEINAILDLLPT 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R MLFSAT + +++ LA + ++ EYIE+ P+ +++++ + + + K+ LL Sbjct: 177 V--RRTMLFSATYTPQIKALAAKMLDKPEYIEITPDTAAAEAVQQKVHHVNKDNKLPLLL 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LIE++ DR ++FA T+ + LAA G V L G +Q R R L+EF G + Sbjct: 235 HLIEKQKQDRILVFARTRTWANRLTDKLAAHGISVAALHGSKSQSLRKRTLEEFKDGKIH 294 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL I + V NYD+P+ EDYVHRIGRTGRAG SG ++SL E L Sbjct: 295 ILVATDVAARGLDISNLPLVVNYDIPNSPEDYVHRIGRTGRAGVSGIAVSLVSPEERNLL 354 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 AIE + H IPV +D+P + R GN APR + Sbjct: 355 LAIEDLLRHQIPVEAVKGFTEDSDVPDFVLY---RPGNPKSERNAPRAIK 401 >UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1I3Q7_VITVI Length = 916 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 140/383 (36%), Positives = 211/383 (55%), Gaps = 13/383 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F++ L + + + + + TPIQ A+P+ +AGRD+ AQTG+GKT AF Sbjct: 423 FAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICG 482 Query: 71 LL-SHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 +L + + ++ P ALI++PTREL+ QIH +A+ + TGLK+ +AYGG +Q + Sbjct: 483 ILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFR 542 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM--P 187 LE GVDIL+ T GRL+D ++ ++L I+ + LDEADRM D+GF IR + +M P Sbjct: 543 NLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQIRKIVEQMDMP 602 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 P R MLFSAT ++ LA + ++N ++ V + I + + + + +K L Sbjct: 603 PPGARQTMLFSATFPNEIQRLAADFLSNYIFLSVGRVGSSTDLIVQRVEFVEDTDKRYHL 662 Query: 248 QTLIEEEWPDRA-------IIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 L++ + +R ++F TK + + L +G + GD Q +R R L Sbjct: 663 MDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERALK 722 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F G I+VATDVAARGL IP V HV N+DLP +DYVHRIGRTGRAG SG + + Sbjct: 723 SFKSGATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDYVHRIGRTGRAGKSGLATAFF 782 Query: 361 CEEY---ALNLPAIETYIGHSIP 380 + A +L + +P Sbjct: 783 NDGNLSLAKSLVELMQESNQEVP 805 >UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organisms RepID=Q3SF48_THIDA Length = 533 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 161/411 (39%), Positives = 227/411 (55%), Gaps = 13/411 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FS+ L P +++++ G+ N TP+Q A+P L+G D+ + TG+GKT AFL + Sbjct: 1 MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSI 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQ 127 LL+ PA+ K PR L++ PTRELA+Q+ A + + GG Y Q Sbjct: 61 QRLLAEPAV---KSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQ 117 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 LK L VD+++ T GRLID+ ++ I+ ++V+VLDEADRM D+GF+ DI+ + R P Sbjct: 118 LKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCP 177 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRL 246 +R +LFSATL V LA E +A+ IE+E +I++ L + N + K RL Sbjct: 178 A--ERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKEAKIEQRLLFADNMDHKNRL 235 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L L+ + +AI+FA+TK EEI LA G L GD+ Q +R R L G Sbjct: 236 LDALLRDVEMVQAIVFASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGR 295 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 +LVATDVAARG+ + +++HV N+DLP EDYVHRIGRTGRAG +G ++S A Sbjct: 296 TRVLVATDVAARGIDVASISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAGMREGG 355 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNR 417 + IE Y G+ I V L R + R GNG R PR Sbjct: 356 LVKNIERYTGNRIEVHTLPG------LEPTQRPSTGRPGNGRPRGNGPRGG 400 >UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=Eukaryota RepID=RH52_ARATH Length = 646 Score = 546 bits (1408), Expect = e-154, Method: Composition-based stats. Identities = 137/387 (35%), Positives = 211/387 (54%), Gaps = 15/387 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F++ L + +++ + TP+Q A+P+ AGRD+ AQTG+GKT AF Sbjct: 146 NTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPII 205 Query: 69 HYLLSHPAIADRKVNQ---PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 ++ I + + P A+I++PTRELA QIH +A + TG+K+ +AYGG + Sbjct: 206 SGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVN 265 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 +Q++ LE GVDIL+ T GRL D ++ ++L ++ + LDEADRM D+GF IR + ++ Sbjct: 266 QQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQ 325 Query: 186 M--PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 M PP R MLFSAT ++ LA + ++N ++ V + I + + + + +K Sbjct: 326 MDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDK 385 Query: 244 MRLLQTLI--EEEWPDR-----AIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 L L+ + E ++ ++F TK + + L +G + GD +Q++R Sbjct: 386 RSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQERE 445 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 L F G ILVATDVAARGL IP V HV N+DLP+D +DYVHRIGRTGRAG SG + Sbjct: 446 VALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLA 505 Query: 357 ISLACEEYALN---LPAIETYIGHSIP 380 + + L + +P Sbjct: 506 TAFFNDNNTTMAKPLAELMQEANQEVP 532 >UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKQ8_FERNB Length = 571 Score = 546 bits (1407), Expect = e-154, Method: Composition-based stats. Identities = 135/372 (36%), Positives = 209/372 (56%), Gaps = 9/372 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLA-GRDVAGQAQTGTGKTMAFLTST 67 ++F DF L +++ A++KKG+ T IQ + LP L+ +D+ QAQTGTGKT AF Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPL 77 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + + +A+I+ PTRELA+QI + + L +K+ YGG +KQ Sbjct: 78 LERI------DFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQ 131 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 K LE GVDI++GT GR+ID+ ++ ++L ++ +VLDEADRM D+GF+ D+ + +R Sbjct: 132 FKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTG 191 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 + LFSAT+ + ++A + M ++ ++ T ++ F ++K+ LL Sbjct: 192 ENKR--TFLFSATMPKEIVDIARKFMKEYIHVSTVKDELTTENAEQLYFEVDEKDKLPLL 249 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I+ I+F TK +EI L G+ L GD +Q +R R+LD+F + L Sbjct: 250 CRIIDMNPDFYGIVFCQTKLEVDEISKKLLDLGYNADGLHGDYSQYQRERVLDKFRKKQL 309 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILV TDVAARG+ I +THV NY +P D E YVHRIGRTGRAG G +I+ + + Sbjct: 310 RILVTTDVAARGIDIDGLTHVINYSVPRDPEYYVHRIGRTGRAGKKGFAITFVTRDDYFH 369 Query: 368 LPAIETYIGHSI 379 ++ + I Sbjct: 370 FARVKRFAKAKI 381 >UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepID=C0W1P0_9ACTO Length = 616 Score = 546 bits (1407), Expect = e-154, Method: Composition-based stats. Identities = 143/405 (35%), Positives = 217/405 (53%), Gaps = 17/405 (4%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T F+D L V+ A+ + GF TPIQ A+P L GRD+ G AQTGTGKT AF Sbjct: 3 TMTTFADLNLPENVLSAITEMGFETPTPIQEQAIPHLLEGRDIVGIAQTGTGKTAAFGLP 62 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYD 125 ++ D N +A+++APTRELA+Q E A +K+ YGG Y Sbjct: 63 MLAHI-------DPGFNAVQAIVLAPTRELAMQSATAIESFAAHMPKVKVVTVYGGASYT 115 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+K L+SG +++GT GR+ID ++ + L + V+VLDEAD M +GF +D+ + Sbjct: 116 PQIKGLKSGAQVVVGTPGRVIDLIEKGALKLNNVSVLVLDEADEMLRMGFAEDVETIAAS 175 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 MP + +R+ LFSAT+ ++ +A + + + IEV + T I + + K+ Sbjct: 176 MPESGKRITALFSATMPDFIQRVADQHLTDPVRIEVARQSSTVENIHQTYAVVPFKHKLG 235 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L ++ D AI+F T+ +E+ +A G ++GDV+Q +R RI+ G Sbjct: 236 ALGRVLATRDEDAAIVFVRTRVDADEVAVDMATRGFTAAAISGDVSQNERERIVSRLRDG 295 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 LD+LVATDVAARGL + + V N+D+P + E YVHR+GRTGRAG +G S++ + Sbjct: 296 SLDVLVATDVAARGLDVERIGLVINFDVPRETEAYVHRVGRTGRAGRAGRSLTFFTPKEQ 355 Query: 366 LNLPAIETYIGHSI---------PVSKYNPDALMTDLPKPLRLTR 401 L IE G + VS++ L++ +P + L R Sbjct: 356 FRLRQIEKLTGTKMEEIVIPSPREVSEFRARRLVSLMPDRIELGR 400 >UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform c n=3 Tax=Caenorhabditis elegans RepID=Q65XX1_CAEEL Length = 660 Score = 546 bits (1407), Expect = e-154, Method: Composition-based stats. Identities = 140/387 (36%), Positives = 204/387 (52%), Gaps = 15/387 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F++ P V+E + + G+ TP+Q ++P LA RD+ AQTG+GKT AFL Sbjct: 139 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 198 Query: 69 HYLLSHPA--------IADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 ++L+ R+ P AL+++PTRELA+QIH +A + + ++ + YG Sbjct: 199 QHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYG 258 Query: 121 G-DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 G + Y Q+ L +G ILI T GRLID +Q I L + +VLDEADRM D+GF I Sbjct: 259 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQI 318 Query: 180 RWLFRR-MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFY 237 R + + MPP R +FSAT ++ LA + + N ++ V T I++ L + Sbjct: 319 RKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLW 378 Query: 238 PSNEEKMRLLQTLI-EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 + EK L ++ E + ++F TK E+ L R + GD+ Q +R Sbjct: 379 VNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERE 438 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 R L+ F G ILVAT VAARGL IP V HV NYDLP D ++YVHRIGRTGR G G + Sbjct: 439 RNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIA 498 Query: 357 ISLACEEYALNLPAIETYI---GHSIP 380 S ++ ++ I +P Sbjct: 499 TSFFNDKNRGIGRDLKNLIVESNQEVP 525 >UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pneumophila RepID=Q5ZT20_LEGPH Length = 589 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 146/389 (37%), Positives = 213/389 (54%), Gaps = 10/389 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + FS F + +ALE F +PIQA +PL L GRD AQTGTGKT AF Sbjct: 1 MNQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAF 60 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGD 122 L +++ +ALI+APTRELA+Q+ E L++ + + + GG Sbjct: 61 ALPILQNL-------SPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQ 113 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y +QLK L SG +++GT GR++D+ + + L ++ +LDEAD M +GFI+D+ + Sbjct: 114 EYGRQLKQLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETI 173 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++P LFSAT+ YR+R++A +N+ IE+ E T I++ + S + Sbjct: 174 LEKLPEKK--QMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQ 231 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K L ++E E I+F TK EE+ L G R + GD+ Q R RI+ +F Sbjct: 232 KPDALIRVLEVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQF 291 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 +G +DILVATDVAARGL + VTHV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 292 KQGAIDILVATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTP 351 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMT 391 + + + +IE + I + D ++ Sbjct: 352 KESRLISSIERHTRQRIEKVQVPNDHMIQ 380 >UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacteria RepID=Q0K893_RALEH Length = 646 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 151/413 (36%), Positives = 213/413 (51%), Gaps = 25/413 (6%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 E F+ L ++ AL + ++ TP+QA A+P LAGRD+ +QTG+GKT AF+ Sbjct: 57 ESGFATLGLDAAILRALSELNYNTPTPVQAQAIPAFLAGRDLLVSSQTGSGKTAAFMLPA 116 Query: 68 FHYLLSHPAI--------------ADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG- 112 + PA QP L++ PTRELA+Q+ A Sbjct: 117 IQRISEMPAPQRATEPAKRMKGKRPRPSPAQPALLVLTPTRELALQVTEAAAKYGRNLRR 176 Query: 113 LKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYD 172 + GG Y KQL L DIL+ T GRL+D+ I+L A+Q++V DEADRM D Sbjct: 177 IVCASILGGMPYPKQLAALAKMPDILVATPGRLLDHIDAGRIDLSALQMLVFDEADRMLD 236 Query: 173 LGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIK 232 +GF DI + P R ++FSATL R+ +LA Q+ + + IE+ + I+ Sbjct: 237 MGFADDIDAIVNATPAT--RQTLMFSATLDARIAQLASRQLRDPQRIEIAAARADQSHIE 294 Query: 233 EELFYPSN-EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVA 291 + L + + K RLL L+ + +AI+F TK + + L+ G G L GD+ Sbjct: 295 QRLHFTDDMSHKERLLDHLLRDATLKQAIVFTATKRDADSLAERLSDTGFSAGALHGDMT 354 Query: 292 QKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAG 351 Q R R L RG+L +LVATDVAARG+ +P +THV N+DLP EDYVHRIGRTGRAG Sbjct: 355 QGARNRTLTALRRGNLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAG 414 Query: 352 ASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 SG +I+L IE + I DA + + +P R +PR+ Sbjct: 415 RSGTAINLVNHNDMFQWKRIERFTNQRI-------DASVIEGLEPRRSPKPRS 460 >UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteria RepID=Q5NZY2_AZOSE Length = 658 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 140/387 (36%), Positives = 208/387 (53%), Gaps = 11/387 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F+ L +++AL + G+ +PIQA+ +P LAG D+ G+AQTGTGKT AF Sbjct: 44 ESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLL 103 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQ 127 L D V P+ L++APTRELA+Q+ + A+ G + YGG Q Sbjct: 104 DRL-------DLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQ 156 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L+ L G +++GT GR++D+ ++ +NL ++ +VLDEAD M +GFI D+ W+ + P Sbjct: 157 LRQLARGAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTP 216 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R LFSAT+ +R +A + ++++ T ++ S K+ L Sbjct: 217 A--ERQTALFSATMPDAIRRVAHRYLREPREVKIKASTTTVSTTRQRYCQISVAHKLDAL 274 Query: 248 QTLIE-EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 ++E EE D AIIF TK E+ L A G+ L GD+ Q+ R R++++ G Sbjct: 275 TRILEVEEDFDAAIIFVRTKTATVELADKLEARGYSAAALNGDMTQQLRERVIEQLKGGQ 334 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 LDI+VATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG +G +I Sbjct: 335 LDIVVATDVAARGLDVSRISHVINYDIPYDTEAYVHRIGRTGRAGRTGSAILFVAPREMR 394 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDL 393 L IE I + + D Sbjct: 395 MLKVIERATRQPIEALQLPSREAVADK 421 >UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabditis briggsae RepID=A8WWC4_CAEBR Length = 692 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 146/402 (36%), Positives = 208/402 (51%), Gaps = 30/402 (7%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + FSD P V+E + + G+ TP+Q ++P L RD+ AQTG+GKT AFL Sbjct: 163 ENFSDAGFGPAVMENVTRSGYTKPTPVQKHSIPTLLFNRDLMSCAQTGSGKTAAFLLPII 222 Query: 69 HYLLS----------------------HPAIAD-RKVNQPRALIMAPTRELAVQIHADAE 105 ++++ P + R+ P AL+++PTRELA+QIH +A Sbjct: 223 QHIMAGGPDMIKTVSSATNIFGFKVILQPTFNNGRRTYYPSALVLSPTRELAIQIHKEAA 282 Query: 106 PLAEATGLKLGLAYGG-DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVL 164 + T L+ + YGG + Y Q+ L SGV ILI T GRLID +Q I L + +VL Sbjct: 283 KFSYKTNLQTAILYGGRENYRDQVNRLRSGVHILIATPGRLIDIIEQGFIGLSGCRYLVL 342 Query: 165 DEADRMYDLGFIKDIRWLFRR-MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVE 222 DEADRM D+GF IR + + MPP R +FSAT ++ LA + + N ++ V Sbjct: 343 DEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQLLAKDFLKENYVFLAVG 402 Query: 223 PEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEW-PDRAIIFANTKHRCEEIWGHLAADGH 281 T I++ L + + EK + L ++ E + ++F TK E+ L Sbjct: 403 RVGSTSENIEQRLLWVNEMEKRQNLMDILMNEDATNLVLVFVETKRGANELAYFLNRQQI 462 Query: 282 RVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYV 341 R + GD+ Q +R R L+ F G ILVAT VAARGL IP V HV NYDLP D ++YV Sbjct: 463 RSVSIHGDLKQIERERNLEMFRSGQFPILVATAVAARGLDIPNVRHVVNYDLPGDSDEYV 522 Query: 342 HRIGRTGRAGASGHSISLACEEYALNLPAIETYI---GHSIP 380 HRIGRTGR G G + S ++ ++T I +P Sbjct: 523 HRIGRTGRCGNLGIATSFFNDKNRGIGRDLKTLIMEANQEVP 564 >UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ3_AZOC5 Length = 582 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 164/427 (38%), Positives = 225/427 (52%), Gaps = 19/427 (4%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T FS+ L KV+ A+ G+ TPIQA A+P LA RDV G AQTGTGKT AF Sbjct: 59 TSSDPMSFSELGLSEKVLSAVAATGYTTPTPIQAQAIPHVLARRDVLGLAQTGTGKTAAF 118 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 L A + PR LI+ PTRELA Q+ + + L + L GG Sbjct: 119 TLPMLTLLEQGRA----RARMPRTLILEPTRELAAQVEENFVRYGKNHKLNVALLIGGVS 174 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 + Q L GVD+LI T GRL+D+ ++ + L I+V+V+DEADRM D+GFI DI + Sbjct: 175 FGDQDTKLLRGVDVLIATPGRLLDHVERGRLLLSGIEVLVIDEADRMLDMGFIPDIERIC 234 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE- 242 + +P R + FSAT+ ++ L + ++N +EV I + L E+ Sbjct: 235 KLVPFT--RQTLFFSATMPPEIQRLVSQFLSNPVRVEVSKPASANTSITQLLVASGREDY 292 Query: 243 -KMRLLQTLIEE-EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 K L+ LI + I+F N K + L G V L GD+ Q R + LD Sbjct: 293 EKRETLRELIRNADQLQNGIVFCNRKRDVAVVHRSLQKHGFNVVCLHGDMDQHARTQALD 352 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F G+ +LVA+DVAARGL IPAV+HVFNYD+P EDYVHRIGRTGRAG +G +I L Sbjct: 353 QFRTGEATLLVASDVAARGLDIPAVSHVFNYDVPHHSEDYVHRIGRTGRAGRTGTAIMLV 412 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLR-------LTRPRTGNGPRRTGA 413 + A +L AIE IG++IP + + L P+ R R +R+G Sbjct: 413 THDDAKSLAAIEKLIGNAIP---WQGEPLGEAPPREKRSRGGDRREERGERSERNKRSGR 469 Query: 414 PRNRRRS 420 R+ R++ Sbjct: 470 GRSERKA 476 >UniRef50_C4Q0V4 DEAD box ATP-dependent RNA helicase, putative n=1 Tax=Schistosoma mansoni RepID=C4Q0V4_SCHMA Length = 769 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 129/409 (31%), Positives = 201/409 (49%), Gaps = 10/409 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F++ + ++ + K G+ TPIQ+ P+ L+GRDV G AQTG+GKT +FL Sbjct: 93 SFNELNVPDYILSVIAKNGWQLPTPIQSQGWPMALSGRDVVGIAQTGSGKTASFLLPAVI 152 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 ++++ P + + P LI+ PTRELA Q+ A+ A+A L+ YGG QL+ Sbjct: 153 HIMAQPRLL--RNEGPICLILVPTRELAQQVLVVAKEFADAASLRAMCFYGGSAKGTQLR 210 Query: 130 VLESGVDILIGTTGRLIDYAK-QNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 ++ G +I I T GRLID+ + Q ++ L + +VLDEADRM D+GF IR + P Sbjct: 211 EMQKGGEICIATPGRLIDFIRVQRNL-LSRVTYLVLDEADRMLDMGFEPQIRKIIGHTRP 269 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQK-TGHRIKEELFYPSNEEKMRLL 247 R +++SAT V+ LA E + + + + I + + + K + L Sbjct: 270 D--RQTLMWSATWPREVQTLAREFLTDYIQVNIGSVSLHANPNITQIVEIMDDWSKEQRL 327 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+ R ++F TK R +++ L G V + G Q+ R L F G + Sbjct: 328 IELLTSFGRARTLVFVETKRRTDQLTNSLRRRGFYVEAMHGGKQQRDRELTLANFKSGRM 387 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE---Y 364 +ILVATDVA+RGL I + +V N+D P+ EDY+HRIGRT R+ +G + + + Sbjct: 388 NILVATDVASRGLDIDNIEYVVNFDFPNQTEDYIHRIGRTARSDKTGTAFTFFTHKNVRQ 447 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGA 413 A +L I I + L K L + + G Sbjct: 448 ARDLIDILDEANQEISAELVQLAGMSNYLRKSSTLKKNPPAFQQKPPGR 496 >UniRef50_C5S9J5 DEAD/DEAH box helicase domain protein n=6 Tax=Gammaproteobacteria RepID=C5S9J5_CHRVI Length = 683 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 226/456 (49%), Positives = 282/456 (61%), Gaps = 42/456 (9%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ THLT +F AL P+++ L + GF CTPIQA LP+ L G D+AGQAQTGTGKT Sbjct: 1 MTDTHLTSTRFDSLALDPRILAGLAEAGFTQCTPIQAETLPIALQGHDIAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQP----------------------------------- 85 AFL + LL P A + Sbjct: 61 AAFLVALMQRLLHEPPEAMPESAAAPETPVSADGSPETESLDPANALEAESEPESAPAPA 120 Query: 86 ------RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILI 139 RAL++APTRELAVQIH D LA+ TGL+ + YGG GY +Q L +GVDILI Sbjct: 121 RRRRGPRALVLAPTRELAVQIHKDTLALAKHTGLRSTVVYGGTGYQQQRDELAAGVDILI 180 Query: 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSA 199 GT GRLIDY KQ+ +L I+VVVLDEADRM+DLGFIKDIR+LFR+MPP QRL MLFSA Sbjct: 181 GTPGRLIDYYKQHVFDLKRIEVVVLDEADRMFDLGFIKDIRYLFRQMPPVEQRLGMLFSA 240 Query: 200 TLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRA 259 TLSYRV ELA+E MN+ +++E EQ T R+++ + +NEEK+ LL LI R Sbjct: 241 TLSYRVTELAYEHMNHPRLVKIETEQVTADRVRQVCYMTANEEKIPLLLGLIRGWPDGRI 300 Query: 260 IIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARG 319 I+F NTK + +WG+L +G +L+GDV Q KRL++L +FT G L +LV TDVAARG Sbjct: 301 IVFVNTKREADRVWGYLQGNGIDTAVLSGDVPQPKRLKLLRDFTNGTLPVLVGTDVAARG 360 Query: 320 LHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSI 379 LHIP VTHV NYDLP+D EDYVHRIGRT RAGA+G ++S CE YA L IE YIG + Sbjct: 361 LHIPDVTHVVNYDLPEDPEDYVHRIGRTARAGAAGDAVSFVCETYAFCLLDIEQYIGIKV 420 Query: 380 PVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 PV +P AL+ ++ R+ R RR G + Sbjct: 421 PVEPVDP-ALLAEVDPRSRIRPDRADREERRDGRDK 455 >UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=C7HXF4_THIIN Length = 666 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 150/390 (38%), Positives = 206/390 (52%), Gaps = 10/390 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T F++ L +++AL G+ +PIQA +P LAGRDV GQAQTGTGKT AF Sbjct: 2 TSQQISPFAELGLPEPLLQALRDVGYETPSPIQAATIPPLLAGRDVLGQAQTGTGKTAAF 61 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGD 122 + D +AL++APTRELA+Q+ A G + YGG Sbjct: 62 ALPILAKI-------DCNARHTQALVLAPTRELAIQVAEAFARYATHLPGFNVLPIYGGQ 114 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y QL L+ G +++GT GR+ID+ ++ + L + +VLDEAD M +GFI D+ + Sbjct: 115 SYVPQLASLKRGAHVVVGTPGRIIDHLERGTLKLDQLAHMVLDEADEMLRMGFIDDVESI 174 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++ PP QR LFSAT+ +R +A + + + I ++ T I++ + S Sbjct: 175 LKKTPP--QRQVALFSATMPSAIRRIAQTYLRDPQEITIKAATTTATHIQQRYWMVSGLH 232 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K+ L ++E E + IIFA TK EE+ LAA G L GDV Q R R++ Sbjct: 233 KLDALTRILEVEPFEGMIIFARTKQATEELAEKLAARGFTAAALNGDVPQALRERMVQRL 292 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G LDILVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 293 KDGQLDILVATDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAILFVTP 352 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTD 392 L AIE I + + D Sbjct: 353 RERHLLRAIERATRQPITQMQLPSTEAVND 382 >UniRef50_A3JG19 ATP-dependent RNA helicase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JG19_9ALTE Length = 463 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 187/421 (44%), Positives = 267/421 (63%), Gaps = 2/421 (0%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 ++H ++ +FSD L ++ +A+ GF CTPIQA LP TLA +D+ GQAQTGTGKT A Sbjct: 36 RSHTSDLRFSDLNLDHRLQQAIAAIGFEYCTPIQAETLPWTLACQDLIGQAQTGTGKTAA 95 Query: 63 FLTSTFHYLLSHPAIADRK-VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 FL + +L P ++ ++PR L +APTRELA+QI DAE L TG K+ GG Sbjct: 96 FLITAIQTMLETPIEDSKRFASEPRVLALAPTRELAMQIAKDAEQLCAHTGHKVVTVVGG 155 Query: 122 DGYDKQLKVLESGV-DILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 YDKQ L++ V DIL+ T GRLID+ + L I +++LDEADRM D+GFI D++ Sbjct: 156 MHYDKQRDQLQNEVVDILVATPGRLIDFLGSQDVFLDQIDILILDEADRMLDMGFIPDVK 215 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + R+ P R +LFSAT + V LA +AE++E+EPEQKT R+++ ++ + Sbjct: 216 RIIRKCTPKEDRQTLLFSATFNQDVLNLASMWTQSAEFVEIEPEQKTAERVEQTVYLVGD 275 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 +EK+R+L ++ D+A++FAN + +C ++ L G V L++G++AQ KRL+ L+ Sbjct: 276 DEKLRVLVNYLKRPEVDKALVFANRRDQCRDLEEDLRNQGVSVSLMSGEIAQAKRLKTLE 335 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F G + +LVATDVA RG+H+ VTHVFNY+LPD+ EDYVHRIGRTGRAG++G SIS A Sbjct: 336 QFKAGSIQVLVATDVAGRGIHVNGVTHVFNYNLPDNAEDYVHRIGRTGRAGSTGVSISFA 395 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 E+ + LPAIE YIG + + ++ P+ R R G R TG + RS Sbjct: 396 GEDDSFALPAIEKYIGQKLANEVPDEALMVPMDNAPIARKRGRRPQGTRPTGNRSSGNRS 455 Query: 421 G 421 G Sbjct: 456 G 456 >UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae RepID=A7K2L3_VIBSE Length = 419 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 144/409 (35%), Positives = 219/409 (53%), Gaps = 10/409 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F+D + K++E L TP+Q ++P L G+++ AQTGTGKT AF Sbjct: 4 NFADLGIEQKLIETLSNLNIVTPTPVQEKSIPHVLEGKNLLAAAQTGTGKTAAFGLPIIQ 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + P+AL++ PTRELA Q+ + + T L++ YGG Q + Sbjct: 64 TVQQKKL-----NGTPQALVLVPTRELAQQVFDNLNQYSAQTELRIVCVYGGTSIGVQKR 118 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE G DILI T GRL+D+ ++N+ ++VLDEADRM D+GF D++ +FRR+P Sbjct: 119 KLEEGADILIATPGRLLDHLFNGNVNISKTSMLVLDEADRMLDMGFWPDLQRIFRRLPA- 177 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 ++ +LFSAT R++ +A++ M + +EV P T +K+ ++ + K LL Sbjct: 178 -EKQILLFSATFEKRIKTIAYKLMESPVEVEVSPANTTAETVKQMVYPVDKKRKRELLAY 236 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI + ++F TK +E+ L DG + + GD +Q R R LDEF +G + Sbjct: 237 LIGSRNWQQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRA 296 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVAARGL I + V N+D+P EDYVHRIGRTGRAG SG ++SL + L Sbjct: 297 LIATDVAARGLDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLH 356 Query: 370 AIETYIGHSIP---VSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 AIE + +P ++ + P + P+ R R+ + +R + Sbjct: 357 AIENLLDQRLPQEWLAGFEPTLIEEVEPEKNGSGRRRSRSSEKRKLKAK 405 >UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8H7_UNCMA Length = 497 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 147/394 (37%), Positives = 220/394 (55%), Gaps = 9/394 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF++ L P +V A+ + GF TPIQ A+PL + G+D+ GQA+TGTGKT AF Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVE 62 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + + L++ PTRELAVQ+ + + + G++ YGG + Q+K Sbjct: 63 AI-------RPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVK 115 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE I++GT GRL+++ ++ ++ I++ VLDEAD+M D+GFI + + +++P Sbjct: 116 ALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPE- 174 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSATLS V+ LA + + + E IE E E T + ++K L Sbjct: 175 -RRQTLLFSATLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMPEKQKFEALTR 233 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+++E P+ AI+F T+ R E+ L G+ L GD+ Q +R LD+F G++ I Sbjct: 234 LLDQEKPELAIVFVATRIRVGELAKALVERGYHALGLHGDLLQYQRENTLDKFKAGEVSI 293 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL I VTHV+N+D+P D + YVHRIGRTGRAG +G + + + L Sbjct: 294 LVATDVAARGLDIQGVTHVYNFDIPRDPDSYVHRIGRTGRAGNAGTATTFVTPKDKTALE 353 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPR 403 AIE I H I A T+ + + R Sbjct: 354 AIEQAIDHQITSKPAPGGAESTEKNIEAVIEKIR 387 >UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicutes RepID=DBPA_BACSU Length = 479 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 135/402 (33%), Positives = 213/402 (52%), Gaps = 10/402 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F ++ + ++ ALE G+ T +Q +P L +D+ ++QTG+GKT +F Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCE- 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +A+ N+P+ALI+ PTRELAVQ+ D + +K +G +DKQ Sbjct: 63 ------LANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAE 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ I++GT GR++D+ ++ + L + +V+DEAD M ++GFI+ + + + +P Sbjct: 117 LKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPT-- 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R MLFSATL + +L+ + M N E+IEV+ T I+ + E K LL+ + Sbjct: 175 ERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDV 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E PD IIF TK ++ L G+ + G + Q+ R +++EF RG+ L Sbjct: 235 LMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARG+ I ++ V NYDLP + E YVHR GRTGRAG G +IS L Sbjct: 295 VATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLAD 354 Query: 371 IETYIGHSI-PVSKYNPDALMTDLPKPLRLTRPRTGNGPRRT 411 IE YIG I + + + + P+ L R + ++ Sbjct: 355 IEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKS 396 >UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY81_9PLAN Length = 458 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 136/399 (34%), Positives = 210/399 (52%), Gaps = 7/399 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 ++ T + F+ L +++ ALEK G+ TPIQA +P L G DV GQA+TGTGKT Sbjct: 4 LTGTDAPKPTFASMDLSDQMMAALEKAGYEYPTPIQAGLIPRALEGVDVVGQARTGTGKT 63 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +F+ L +R P+ALI+ PTRELAVQ+ + L+E + YG Sbjct: 64 ASFVIPILELL-----DIERGAPTPQALILVPTRELAVQVRDEVVKLSEGLKINCAAVYG 118 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Q+ L+ G +++GT GR++D+ + I+ I+ VVLDEADRM D+GF DI Sbjct: 119 GKPIKSQVDKLKKGCHVVVGTPGRVLDHIARGTIDFTHIECVVLDEADRMLDIGFRPDIE 178 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + +R P +R +L SAT+ + +LA M E + P + I+++ F + Sbjct: 179 RILKRCP--RERQTLLLSATVPPPIAKLAQRYMYEPEMLNFSPADVSVDTIEQKYFTVEH 236 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 + K LL L+ E P +AI+F TK ++++ L + GD++Q +R R++ Sbjct: 237 DRKFDLLMKLLLREEPKQAIVFCRTKRGTDKVYQKLTKKLGNTAAIHGDLSQGQRDRVMA 296 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F G + LVATDV RG+ + V+H+ N+D+P C+DYVHR+GRTGR G G + + Sbjct: 297 GFRDGSVRYLVATDVIGRGIDVSTVSHIVNFDIPVFCDDYVHRVGRTGRMGREGVAYTFV 356 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 C + L IE I + + + + R Sbjct: 357 CPDEGHELTRIEERINKLLKRDEMRDFEPVGYGERSARA 395 >UniRef50_A8P4I3 ATP-dependent RNA helicase An3, putative n=2 Tax=Brugia malayi RepID=A8P4I3_BRUMA Length = 754 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 152/422 (36%), Positives = 217/422 (51%), Gaps = 18/422 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D LHP + + G+ TP+Q ++P + RD+ AQTG+GKT AFL + Sbjct: 291 FADLKLHPWIEGNIRLSGYGRPTPVQKYSIPTLMNNRDLMSCAQTGSGKTAAFLVPLINN 350 Query: 71 LLSHPAIA---------DRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 +L A R+ P ALI++PTREL++QI+ ++ A T + L YGG Sbjct: 351 VLQAGPEALYKSTTQQNGRRRQYPAALILSPTRELSLQIYNESRKFAYRTPITSALLYGG 410 Query: 122 -DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 + Y +Q+ L GV ILI T GRLID +Q I L + +VLDEADRM D+GF IR Sbjct: 411 RENYREQINKLRLGVHILIATPGRLIDVMEQGLIGLDGCRFLVLDEADRMLDMGFEPQIR 470 Query: 181 WL--FRRMPPANQRLNMLFSATLSYRVRELAFEQ-MNNAEYIEVEPEQKTGHRIKEELFY 237 + +MPP QR+ +FSAT ++ LA + M N ++ V T I +++ + Sbjct: 471 QIVDLSKMPPKGQRVTAMFSATFPKEIQVLAQDFLMPNYVFLAVGRVGSTSENIMQKIVW 530 Query: 238 PSNEEKMRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 EK L L++ P ++F TK ++ +L DG+ V + GD+ Q R Sbjct: 531 VEEHEKKSFLMDLLDAGEPSALTLVFVETKRGASDLAYYLQKDGYNVVAIHGDLKQFDRE 590 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 + L+ F G ILVAT VAARGL IP V HV NYDLP D ++YVHRIGRTGR G G + Sbjct: 591 KHLETFRSGVATILVATAVAARGLDIPNVKHVINYDLPSDIDEYVHRIGRTGRVGNVGLA 650 Query: 357 ISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLR-LTRPRTGNGPRRTGAPR 415 S ++ + + + ++ P+ L R TRP G R G Sbjct: 651 TSFFNDKNRNIARDLAELV---VEANQELPEWLEKISADAQRYGTRPGRAKGGSRFGGRD 707 Query: 416 NR 417 +R Sbjct: 708 HR 709 >UniRef50_B7EQA6 cDNA clone:J023079L21, full insert sequence n=5 Tax=Magnoliophyta RepID=B7EQA6_ORYSJ Length = 759 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 126/355 (35%), Positives = 197/355 (55%), Gaps = 9/355 (2%) Query: 24 LEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVN 83 +++ GF TPIQA + P+ L RD+ A+TG+GKT+ +L F L + + Sbjct: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILL---KRLQHNSRD 302 Query: 84 QPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTG 143 P L+++PTRELA QI +A+ ++ + YGG QL+ LE G DI++ T G Sbjct: 303 GPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPG 362 Query: 144 RLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSY 203 RL D + ++L + +VLDEADRM D+GF IR + +++ P +R ++F+AT Sbjct: 363 RLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQP--KRQTLMFTATWPK 420 Query: 204 RVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPD-RAI 260 VR++A + ++N + + + I + + + EK R L ++ + P + I Sbjct: 421 EVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKII 480 Query: 261 IFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL 320 IF +TK C+++ +LA + + GD +Q +R +L EF G ILVATDVAARGL Sbjct: 481 IFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGL 539 Query: 321 HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYI 375 I + V NYD P EDYVHRIGRTGRAGA+G + + C++ + + + Sbjct: 540 DIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKIL 594 >UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=Firmicutes RepID=A6TTG0_ALKMQ Length = 549 Score = 541 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 153/405 (37%), Positives = 225/405 (55%), Gaps = 10/405 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + KF+ + ++ L K TP+Q A+P LA RDV QAQTGTGKT+AF+ Sbjct: 2 KNKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPI 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + +ALI+ PTRELA+QI A+ + LAE G+ + AYGG ++Q Sbjct: 62 LERVNVEKPTI-------QALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L+ L+ + I+IGT GRL+D+ ++ INLG + ++VLDEAD+M +GF++D+ + +P Sbjct: 115 LRKLKGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R NM FSAT+ +VR LA + M + I+V+ ++ T I++ + ++ K LL Sbjct: 175 --KRRQNMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVTLDEIRQVVIETTDRGKQDLL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L +E P AIIF TK R + L G+ L GD+ Q KR +++ F + + Sbjct: 233 CQLFDEYNPFMAIIFCRTKRRAIALNEALINLGYNSDELHGDLTQAKREKVMKAFKKSKI 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATDVAARGL I VTH+FNYD+P D E Y+HRIGRTGRAG +G +I+ Sbjct: 293 QYLVATDVAARGLDIEGVTHIFNYDIPQDGESYIHRIGRTGRAGETGMAITFMTSRDRDE 352 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG 412 L IE I + V K + D + + G G ++ Sbjct: 353 LKIIEKVIKMDLDVQKSKSGKIDLD-EEEQDTKKSPKGRGNDKSK 396 >UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA Length = 726 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 139/383 (36%), Positives = 196/383 (51%), Gaps = 11/383 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + LHP V + + TP+Q A+P+ + RD+ AQTG+GKT AFL Sbjct: 211 TSFLELKLHPIVSHNISLTQYTRPTPVQRYAVPIIMQRRDLMACAQTGSGKTAAFLIPLL 270 Query: 69 HYLLSHPAI-----ADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 + + K P ALI+APTRELAVQI+ +A + + ++ + YGG Sbjct: 271 SMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGRD 330 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 QL+ + G ++L+ T GRL D ++ I L I+ +VLDEADRM D+GF IR + Sbjct: 331 IRGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFEPQIRKIV 390 Query: 184 RR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + MPP QR ++FSAT ++ LA + + + ++ V T I + + Y Sbjct: 391 EQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVGSTSQNITQRIVYVDEN 450 Query: 242 EKMRLLQTLIEEEWPDR-AIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EK L ++ + D ++F TK + + G L +G V + GD +Q R L Sbjct: 451 EKRDHLLDILTDIDSDSLILVFVETKRGADALEGFLHTEGSCVASIHGDRSQSDRELALQ 510 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F G ILVAT VAARGL IP V V NYDLP D E+YVHRIGRTGR G G +IS Sbjct: 511 SFREGSTPILVATRVAARGLDIPNVKFVINYDLPTDIEEYVHRIGRTGRVGNLGEAISFY 570 Query: 361 CEEY---ALNLPAIETYIGHSIP 380 ++ A L I +P Sbjct: 571 TDKNNNVAKELVDILLEANQIVP 593 >UniRef50_C4LZM8 DEAD/DEAH box helicase, putative n=4 Tax=Entamoeba RepID=C4LZM8_ENTHI Length = 578 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 132/409 (32%), Positives = 214/409 (52%), Gaps = 10/409 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T + F D L ++ + K GF++ P+Q +P+ L RD+ AQTG+GKT AFL Sbjct: 129 TIETFYDIDLGEELDHNIFKAGFYHPMPVQKATIPIVLDKRDLMSCAQTGSGKTAAFLFP 188 Query: 67 TFHYLLSHPAIADRKVNQ------PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +L +P + + P ALI+APTREL QI+ +A E T ++ YG Sbjct: 189 IISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVRFTEDTPIRSVCVYG 248 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Q++ + G DIL+ T GRL+ + ++ ++L +++ ++ DEADRM D+GF IR Sbjct: 249 GSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLDMGFEPQIR 308 Query: 181 WLFR--RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP 238 + MPP +R ++FSAT +++ LA + +++ +I V T I++ + + Sbjct: 309 EICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVFITVGRAGSTVESIQQIILWV 368 Query: 239 SNEEKMRLLQTLIEEE--WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 E K + ++ E + +IF TK + + +L G++V + GD +Q R Sbjct: 369 EEEIKQEAILDVLGEFAGKGQKTVIFVETKRGADILENYLYDHGYKVDSIHGDRSQADRD 428 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 L F + +LVATDVA+RGL IP + V NYD+P++ E YVHR+GRTGRAG G + Sbjct: 429 FSLKRFKENVIQLLVATDVASRGLDIPDIEVVINYDMPNEIESYVHRVGRTGRAGKKGTA 488 Query: 357 ISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 I+ E+ +P + + + + + + KP R R G Sbjct: 489 ITFINEKTQNLIPPLVSLLEEAKQTIPDWLEEKAQEYRKPFGSKRGRKG 537 >UniRef50_B3L9V8 Helicase, putative n=6 Tax=Alveolata RepID=B3L9V8_PLAKH Length = 528 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 138/379 (36%), Positives = 206/379 (54%), Gaps = 11/379 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + S V+++L+ TPIQ P+ L+G+D+ G+A+TG+GKT+AF+ F Sbjct: 113 ESISKIGFPDYVLKSLKNNNIVTPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAF 172 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++L+ P++ + + P L++APTRELA QI + + + ++ AYGG Q+ Sbjct: 173 VHILAQPSL--KYGDGPIVLVLAPTRELAEQIRQECVKFSVESKIRNTCAYGGVPKSGQI 230 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L+ GV ILI GRLID +QN NL + +VLDEAD+M D+GF IR + ++ P Sbjct: 231 YALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEIQIRKIVEQIRP 290 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNN-AEYIEVEPEQKTG-HRIKEELFYPSNEEKMRL 246 R +++SAT V+ LA + ++ V T RIK+E++ EK+ Sbjct: 291 D--RQTLMWSATWPKEVQSLARDLCKQQPIHVNVGSLTLTACRRIKQEIYLIEEHEKIAN 348 Query: 247 LQTLIEE--EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L+ L++ DR I+F TK + I L DG + GD Q +R +L++F Sbjct: 349 LKLLLQRIFRDNDRIIVFVETKKNADFITKALRLDGVPALCIHGDKKQDERRWVLNDFKT 408 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G IL+ATDVA+RGL I V +V N+D P+ EDYVHRIGRTGRAGA G S + + Sbjct: 409 GKSPILIATDVASRGLDIKDVKYVVNFDFPNQIEDYVHRIGRTGRAGAHGASFTFLTSDK 468 Query: 365 ---ALNLPAIETYIGHSIP 380 A +L I +P Sbjct: 469 YRLARDLVKILRESEQPVP 487 >UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBD4_9SPHN Length = 497 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 164/445 (36%), Positives = 227/445 (51%), Gaps = 39/445 (8%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 L F+D L P++++A+E G+ T IQA A+P L +D+ G AQTGTGKT +F+ Sbjct: 33 LNRMTFADLGLSPELLKAVEDAGYTEPTAIQAEAIPAVLMMKDLIGIAQTGTGKTASFVL 92 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + A R+ PR+LI+ PTRELA Q+ + E LK+ L GG Sbjct: 93 PMIDVM----AAGRRRALMPRSLILEPTRELAAQVAENFEKYGANHDLKMALLIGGVQMG 148 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 QLK L+ GVD+LI T GRL+D ++ I L +++V+DEADRM D+GFI DI ++ + Sbjct: 149 DQLKTLDEGVDVLIATPGRLMDLFERGKILLNGCELLVIDEADRMLDMGFIPDIEFICDK 208 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P R MLFSAT+ + +LA + ++N + IE T I +K Sbjct: 209 LPET--RQTMLFSATMPAPIEKLAKKFLSNPKRIETTRAATTNKDITAFKVPVKARQKRD 266 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ L+ + + AIIFAN K E+ HL G G + GD+ Q RL+ LD F G Sbjct: 267 TLEWLLANDQVETAIIFANRKTTVRELNKHLQRQGFASGEIHGDMDQSSRLKELDRFKSG 326 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 D++ILVA+DVAARGL I V+HVFN+D P +DYVHRIGRTGRAGA G + +L +E A Sbjct: 327 DVNILVASDVAARGLDIKGVSHVFNFDTPWHPDDYVHRIGRTGRAGAKGRAFTLVADEDA 386 Query: 366 LNLPAIETYIGHSIPVSKYN----------------PDALMTDLP--------------- 394 + +E G I V D + P Sbjct: 387 EAIANVEKLTGAKIKVFGKEDVRVELADGSAKNTGSDDEAKDEKPAEKKSRSRSRKRDDE 446 Query: 395 --KPLRLTRPRTGNGPRRTGAPRNR 417 P + R + P R PR R Sbjct: 447 GDAPRKPRRESAEDKPARKSRPRRR 471 >UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7U5_CHRVI Length = 662 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 142/393 (36%), Positives = 217/393 (55%), Gaps = 10/393 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M T F L P + +A++ G+ + T IQ+ +P LAGRD+ GQAQTGTGKT Sbjct: 1 MDTPDETSVGFDALGLSPVIAQAVKNLGYESPTAIQSQCIPHLLAGRDLLGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAY 119 AF L D + +P+ L++ PTRELA+Q+ + A + G + Y Sbjct: 61 AAFALPMLSRL-------DPDLRKPQVLVLTPTRELALQVAEAFQRYATDLKGFNVLPIY 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG GY QL L+ +++GT GR++D+ ++ + L +I+ +VLDEAD M ++GF +DI Sbjct: 114 GGQGYGLQLSQLKRNPQVIVGTPGRVMDHIRRGTLALDSIRALVLDEADEMLNMGFAEDI 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 W+F + P +R LFSAT+ +R +A ++ + +++ +T I++ + Sbjct: 174 DWIFDQAPA--ERQVALFSATMPPAIRRVAQTRLVDPVEVKIAANSETVDTIEQHHCIVT 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ +L ++E E D +IF TK+ E+ L A G L GD+ Q+ R R + Sbjct: 232 RFHKLDVLTRIMELEPFDGLLIFVRTKNATTELADKLKAHGFAAEPLNGDMNQEMRERTV 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + +G LD+LVATDVAARGL + ++HV NYD+P D YVHRIGRTGRAG +G +I L Sbjct: 292 ERLKQGQLDVLVATDVAARGLDVERISHVVNYDIPTDPSAYVHRIGRTGRAGRAGRAILL 351 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTD 392 L +IE I IP + A +++ Sbjct: 352 VEPRERGLLKSIERVIRRPIPSMEPPSAAALSE 384 >UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Bacteria RepID=A5UZK3_ROSS1 Length = 467 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 148/408 (36%), Positives = 212/408 (51%), Gaps = 13/408 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F HP++ + G+H TPIQ +P L GRDV G AQTGTGKT AF+ Sbjct: 1 MSFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L+ P + RA+I+ PTRELA QI E L + TGL+ YGG GY Q+ Sbjct: 61 QRLMRGPR------GRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQI 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GV+I + GRL+D+ ++ + L + +++LDEAD+M+D+GF+ D+R + R P Sbjct: 115 QRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPA 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 QR MLFSAT+ +R LA E + + I++ + ++ + K LL Sbjct: 175 --QRQTMLFSATMPDAIRALAREALREPQTIQIGR-SAPVSTVTHAIYPVAEHLKTALLI 231 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ +IF TKHR + + LA G+R L G+++Q +R LD F G Sbjct: 232 ELLRHTDTGSVLIFTRTKHRAQHLSDTLARMGYRATALQGNMSQNRRQAALDGFRSGRYQ 291 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARG+ + ++HV NYD+P E Y HRIGRTGRA +G + +L + Sbjct: 292 ILVATDIAARGIDVAHISHVINYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRSDTGMV 351 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 AIE IG + P R+ + PR PR+ Sbjct: 352 RAIERLIGEPLKRETVPGFDYHAAAP----AHDARSDHAPRHHAMPRH 395 >UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=beta proteobacterium KB13 RepID=B6BTD3_9PROT Length = 444 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 148/421 (35%), Positives = 229/421 (54%), Gaps = 10/421 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FS+F P + +A+ + + TPIQ +P+ L+G+DV AQTGTGKT AF Sbjct: 1 MSFSNFGFIPPIGKAISRINYSTPTPIQEQCIPVVLSGKDVLASAQTGTGKTAAFCLPLL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + P ++ P LI++PTRELA QI + + + + GG Y Q Sbjct: 61 NLVEKKPKHKHKRNISPDVLILSPTRELATQIEQELKRFSHFMDTNIVSVVGGVSYKLQN 120 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K+L+S V+ L+ T GRL+D KQ INL I +V+DEADRM D+GFI DI+ +F Sbjct: 121 KLLKSNVNFLVATPGRLMDLVKQRKINLKHIDALVIDEADRMLDMGFIPDIKKIFEST-- 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLL 247 + + ++F+ATL+ ++ ++A + + + + I VE E K+ I++ + ++ +K +L Sbjct: 179 SQDQQVLMFTATLNKQIEKIAQQFLKDPQRIAVEQENKSNKNIQQIAYPVADYNQKKLVL 238 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 ++ E ++AIIF TK + + L HR L GD++Q++R R ++ F ++ Sbjct: 239 VDVLNEADLNQAIIFTATKREADRLSDELYLMNHRSKTLHGDMSQRERTRTINRFKNNEI 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARG+ + +THV N+DLP EDY+HRIGRTGRA G +ISL ++ Sbjct: 299 QILVATDVAARGIDVDDITHVINFDLPRQVEDYIHRIGRTGRAERKGKAISLVIDKEKFM 358 Query: 368 LPAIETYIGHSIPVSK---YNPDALMTDLPKPLRLTRPRTGNGPRRTG----APRNRRRS 420 L IE Y I V K D + K + R +G R+ + R++ Sbjct: 359 LQKIEKYANIKIEVIKSTHSTSDLSLVYKKKESGFKKKRRSSGSRKKNDKFTSSSKRKKH 418 Query: 421 G 421 G Sbjct: 419 G 419 >UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L498_9DELT Length = 492 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 150/416 (36%), Positives = 221/416 (53%), Gaps = 10/416 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F LH + E +++ G+ N TPIQA A+P GRD+ G AQTGTGKT AFL Sbjct: 1 MSFDSFCLHATITENIKRLGYENPTPIQAEAIPHVTEGRDLMGLAQTGTGKTAAFLLPII 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L++ + RALI+APTRELA QI+ L T L+ + YGG G Q Sbjct: 61 HRLMT----TKSEKRGVRALILAPTRELAEQIYRAGLDLGRGTRLRAAVIYGGVGMFPQT 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVDI++ GRL+D+ Q ++ A++ +VLDEAD M+D+GF+ DI+ + +P Sbjct: 117 RALRQGVDIIVACPGRLLDHMNQGNVRFDALETLVLDEADHMFDMGFLPDIKRILSALP- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 ++R +LFSAT+ + LA E + + + + ++ ++ S+ +K LL Sbjct: 176 -SERQTLLFSATMPPAISGLAHETLTDPVTVRIGH-MAPLSTVEHAIYPISHTQKAPLLL 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+EE I+F TKHR + + L GH+ L G+++Q++R +D F RG Sbjct: 234 HLLEEAGKQSVIVFTRTKHRAKNLALQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQ 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ + V HV N+D+PD E Y HRIGRTGRA G + + E + Sbjct: 294 VLVATDIAARGIDVSQVGHVVNFDIPDTAEAYTHRIGRTGRAEHEGQAHTFVTGEDMGMV 353 Query: 369 PAIETYIGHSIP---VSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 AIE+++ +P V + PD P G G P+ G Sbjct: 354 RAIESHMKKPLPRREVEGFEPDPSEFRRSYAPAPRYPARGRQGGYGGRPQQGGYRG 409 >UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=Alphaproteobacteria RepID=B0SYC6_CAUSK Length = 678 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 156/409 (38%), Positives = 218/409 (53%), Gaps = 14/409 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 +FS+ L P ++A+ G+ TPIQA A+P+ LAG+DV G AQTGTGKT AF Sbjct: 2 TEFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLI 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L++ A K PRAL++APTRELA Q+ + E A+ T L L GG + Q Sbjct: 62 DKLMNGRA----KARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQE 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L+ GVD+LI T GRL+D+ ++ + + +Q +V+DEADRM D+GFI DI +F+ PP Sbjct: 118 KKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPP 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE---KMR 245 + FSAT+ + L + + + IE T I + + + + K Sbjct: 178 KK--QTLFFSATMPPEITRLTKQFLKDPVRIEASRPATTNENITQLMVKVPSSDPKAKRL 235 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ LIE+ + I+F N K + + L + G + GD+ Q +R + L F G Sbjct: 236 ALRALIEKAQIETGIVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLAAFRDG 295 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 L ILVA+DVAARGL IPAV+HVFNYD+P +DYVHRIGRTGRAG SG + L Sbjct: 296 SLKILVASDVAARGLDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRSGVTYMLVTPADD 355 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 + IG + K + D + + R G R AP Sbjct: 356 KGFDKVVKLIGSTPTEEKLDLDYSGA-----VTIKREGDKRGGGRDRAP 399 >UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Bermanella marisrubri RepID=Q1MY97_9GAMM Length = 614 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 135/399 (33%), Positives = 212/399 (53%), Gaps = 10/399 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + F+ L ++ A+E++G+ +PIQ ++P L G+DV G AQTGTGKT AF Sbjct: 1 MSESSTGFASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAF 60 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGD 122 +V +P+ L++APTRELA Q+ E ++ + +K+ YGG Sbjct: 61 TLPLLAR-------TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGS 113 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 + Q + L+ G ++GT GR++D+ ++ + L I+ VVLDEAD M +GFI D+ W+ Sbjct: 114 DFGSQFRALKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWV 173 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++P +R LFSAT+ +++ +A + + I ++ + T I+++ + + Sbjct: 174 LDQVPE--KRQIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKYWLVKGVD 231 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K + L + E D ++F TK EE+ ++ + G R L GDVAQ +R R +D Sbjct: 232 KNQALLRICETSEFDAMMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQRERAVDRL 291 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 +G +D+LVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 292 KKGQVDMLVATDVAARGLDVERISHVVNYDIPYDAESYVHRIGRTGRAGRSGEAILFVRP 351 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE I + + + R Sbjct: 352 RERRMLSTIERVTRKKIQQIELPTAKEVNAKRRDQFKVR 390 >UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=Eukaryota RepID=RH40_ARATH Length = 1088 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 130/369 (35%), Positives = 192/369 (52%), Gaps = 9/369 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F L P+++ L GF + TPIQA P+ L RD+ A+TG+GKT+ +L F Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + N P LI+APTRELA QI +A ++ + YGG QLK Sbjct: 496 LL---RHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLK 552 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE G DI++ T GRL D + I+ + ++VLDEADRM D+GF IR + +PP Sbjct: 553 ELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPP- 611 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSNEEKMRLL 247 +R ++++AT VR++A + + N + + E I + + EK R L Sbjct: 612 -RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRL 670 Query: 248 QTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 + ++ + + IIF +TK C+ + ++ GD Q +R +L++F G Sbjct: 671 EQILRSQERGSKVIIFCSTKRLCDHLARS-VGRHFGAVVIHGDKTQGERDWVLNQFRSGK 729 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 +L+ATDVAARGL I + V NYD P EDYVHRIGRTGRAGA+G + + E+ Sbjct: 730 SCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWK 789 Query: 367 NLPAIETYI 375 P + + Sbjct: 790 YAPDLIKVL 798 >UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteobacteria RepID=Q0BSI7_GRABC Length = 763 Score = 539 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 154/410 (37%), Positives = 213/410 (51%), Gaps = 6/410 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L V A+ + G+ + TPIQA A+P+ L GRDV G AQTGTGKT +F Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L A + PR+LI+ PTRELA+Q+ + + L L GG+ + Q V Sbjct: 285 LSDRRA----RARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDV 340 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+LI T GRLID + + L +++V+DEADRM D+GFI D+ + +P + Sbjct: 341 LSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLP--H 398 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R + FSAT++ +R LA + N + I V I L +K + L+ L Sbjct: 399 NRQTLFFSATMAPEIRRLADAFLQNPKEITVAKPASVATTITSGLALVGEMDKRKALRHL 458 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + +E A+IF N K + + L G G L GD+AQ R L++F G L +L Sbjct: 459 LRQEKVQNALIFCNRKRDVDILTKSLVKHGFAAGPLHGDLAQSLRFSTLEKFKAGSLQLL 518 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 V +DVAARG+ I ++HVFN+D+P EDYVHRIGRTGRAG G + +LA + + A Sbjct: 519 VCSDVAARGIDIGGLSHVFNFDVPIHAEDYVHRIGRTGRAGREGAAFTLASPDDKFAVDA 578 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 IE I IP + +P R R NG G R R Sbjct: 579 IEKLINAPIPRIEIEGLERAEWSEEPNRGRGRRHKNGKGGKGNNRYGSRG 628 >UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=Rhodobacterales RepID=A1B2U6_PARDP Length = 479 Score = 539 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 151/414 (36%), Positives = 218/414 (52%), Gaps = 5/414 (1%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F+ + +V L G +PIQ ++P +AGRD+ G AQTGTGKT AF Sbjct: 66 DTAFTRMGIDARVAINLPGLGIETPSPIQEKSIPGIVAGRDLLGLAQTGTGKTAAFGLPM 125 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 LL+ + RALI+APTRELA QI + + A T ++ GG + Q Sbjct: 126 LTRLLN--IGRKPEPRTCRALILAPTRELATQIAENIDNYAIGTPIRQFRVVGGASINVQ 183 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ LE GVD+LI T GRLID ++ I+L + +VLDEAD+M D+GFI +R + + +P Sbjct: 184 VQRLERGVDVLIATPGRLIDLIERGAIDLSQTRYLVLDEADQMLDIGFIHALRRIAKMLP 243 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R +LFSAT+ + ELA +N+ + V P + +I + + + + +K LL Sbjct: 244 --RERQTLLFSATMPKLMEELADSYLNDPLRVAVNPPGQAAEKIDQGVHFVNQGDKATLL 301 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + + + AI+F TKH E++ L G +V + G+ +Q +R R L F G+ Sbjct: 302 AEYLSKHVDELAIVFGRTKHGSEKLCKLLDKWGFKVAAIHGNKSQGQRERALASFRAGET 361 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVAARGL IP V HV+NYDLP+ E+YVHRIGRT RAG G +I+ Sbjct: 362 KVLVATDVAARGLDIPQVAHVYNYDLPNVPENYVHRIGRTARAGRDGRAIAFCSPTEIGE 421 Query: 368 LPAIETYIGHSI-PVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 L AIE + I V P + RP G R P ++ Sbjct: 422 LRAIEKAMKAKIAVVGGEEPFEAAKIRERGGPAGRPAQGARKRPARRPSRAPKT 475 >UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIU5_9BACT Length = 537 Score = 539 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 134/385 (34%), Positives = 215/385 (55%), Gaps = 10/385 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLA-GRDVAGQAQTGTGKTMAFLTSTF 68 KF+ L P + + LE KGF +PIQ A+P+ L+ D+ GQAQTGTGKT AF Sbjct: 3 KFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIV 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + + +P+ALI+ PTRELA+Q++ + + + G+ YGG Q Sbjct: 63 QKI-------EPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQK 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ GVD+++ T GR I + + + L +++ +VLDEAD M ++GF++D+ + + P Sbjct: 116 RALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASP- 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + R ++FSAT+ R++++A M+N+ I+ + E T I + ++ E K L Sbjct: 175 -DDRTVLMFSATMPPRLKKIAESYMHNSITIKAKSETMTMETIDQVVYEAYPENKFAALC 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ E IIF TK E++ LA +G+ + GDVAQ+ R R+L F ++ Sbjct: 234 RIMDLEKDFYGIIFCRTKVEVEKVSAGLANEGYAADYIHGDVAQESRERLLKRFRNRNIS 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +L+ATDVAARG+ + ++H+ N+ LP+ E YVHRIGRTGRAG +G +I+L + + Sbjct: 294 LLIATDVAARGIDVTDLSHIVNFSLPEQFESYVHRIGRTGRAGKTGTAITLITPKERSKM 353 Query: 369 PAIETYIGHSIPVSKYNPDALMTDL 393 IE G K M L Sbjct: 354 SFIEKKTGAKTERRKLPFGEEMIKL 378 >UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SERP1688 n=56 Tax=Staphylococcus RepID=Y1688_STAEQ Length = 509 Score = 539 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 144/410 (35%), Positives = 215/410 (52%), Gaps = 11/410 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 Q F + + K V+ LE GF TPIQ ++P L G D+ GQAQTGTGKT AF Sbjct: 2 QNFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPLI 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ ++LI+APTRELA+Q+ ++ +++ +GG ++Q+ Sbjct: 62 EKVVGQ--------QGVQSLILAPTRELAMQVAEQLREFSKGQKVQVVTVFGGMPIERQI 113 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L+ G I++GT GR+ID+ + + I ++LDEAD M ++GFI D+R++ ++P Sbjct: 114 KALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIP- 172 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 A QR MLFSAT+ ++EL + M + I+ + + +I E EK Sbjct: 173 AEQRQTMLFSATMPKAIQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFT 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ P+ AI+F TK R +E+ L + G++ L GD+ Q KRL +L +F +D Sbjct: 233 NFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQID 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL I V+HV+N+D+P D E Y HRIGRTGRAG G +++ + Sbjct: 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 IE + P L + R N R PR +R Sbjct: 353 RQIEDVNNRRMKA--LRPPHRKEVLKAREDDIKDRVQNWMSRENEPRLQR 400 >UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=Pasteurellaceae RepID=DEAD_HAEIN Length = 613 Score = 539 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 138/393 (35%), Positives = 206/393 (52%), Gaps = 10/393 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F+D L +++A+ GF +PIQ +P L G DV G AQTG+GKT AF Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQL 128 + D P+ L+MAPTRELA+Q+ E + G ++ YGG YD QL Sbjct: 66 QI-------DPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQL 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ G +++GT GR++D+ ++ +NL ++ +VLDEAD M +GFI D+ + +P Sbjct: 119 RALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPE 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + LFSAT+ +R + MN+ + ++++ + I + +Y K L Sbjct: 179 NH--QTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALL 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +E E D AIIFA TK +I L +G R L GD+ Q+ R + LD G LD Sbjct: 237 RFLEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLD 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 I+VATDVAARG+ I ++ V NYD+P D E YVHRIGRTGRAG SG ++ L Sbjct: 297 IVVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLL 356 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 IE + I + ++ + + + + Sbjct: 357 RNIEHLMKKGINEVELPNHLVLQECRRKKFVAK 389 >UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5336 Length = 523 Score = 539 bits (1390), Expect = e-152, Method: Composition-based stats. Identities = 138/375 (36%), Positives = 211/375 (56%), Gaps = 8/375 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L +++A+ G+ N TPIQ +P L G+DV GQAQTGTGKT AFL + Sbjct: 88 FADLKLMRPLMDAITAAGYKNPTPIQENVIPPALRGKDVIGQAQTGTGKTAAFLIPFLNR 147 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 H + P ++M PTRELA+QI +AE LA + + YGG G +QL Sbjct: 148 WRPH------TLKGPIGVVMTPTRELALQIANEAEKLAPSKRFRCVPVYGGTGMQRQLDG 201 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L G D+++GT GR++D+ ++ ++L ++ VLDEADRM D+GF DI + +R P + Sbjct: 202 LTRGCDLVVGTPGRMLDHLQRGSMSLSQVRYAVLDEADRMLDIGFRDDIERILKRCP--S 259 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +L SAT+ ++ L M + ++ + PE+ T +I++ F + K LL+ + Sbjct: 260 ERQTLLMSATVPDSIKRLVNRYMRDPVHLHMMPEKPTVDKIRQSYFTVDQDRKFELLKRV 319 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 +E E P + +IF K + ++ L + ++ GD+ Q +R +I+ F D+ L Sbjct: 320 VEREKPRQCLIFVERKRWADNLYRDLKRAVPKAAVIHGDLPQSQREKIMAAFRTADIKYL 379 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 +ATDV +RG+ + ++HV NYDLP D E+YVHRIGRTGR G G +IS E +L Sbjct: 380 IATDVMSRGIDVSGLSHVINYDLPMDIENYVHRIGRTGRIGKDGIAISFVLPEQGEHLTN 439 Query: 371 IETYIGHSIPVSKYN 385 IE I I + Sbjct: 440 IEMMINRLIEEDRVE 454 >UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHM7_GLOVI Length = 437 Score = 539 bits (1390), Expect = e-152, Method: Composition-based stats. Identities = 147/389 (37%), Positives = 225/389 (57%), Gaps = 10/389 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS L VV+AL++ GF TPIQ ++P L GRD+ QAQTGTGKT AF Sbjct: 5 FSALGLSESVVKALDELGFEQPTPIQLKSIPFLLDGRDLLAQAQTGTGKTAAFGLPLVDR 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +D + + +AL++APTRELAVQ+ ++ +G+++ YGG D+Q++ Sbjct: 65 -------SDPQDARVQALVLAPTRELAVQVCEAIHTYSKHSGVRVLPIYGGQPIDRQMRR 117 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L +G I++GT GR++D ++ ++L A++ +VLDEAD+M D+GFI++++ + PP Sbjct: 118 LRAGAQIVVGTPGRVLDLMRRGSLDLSALRTLVLDEADQMLDMGFIEEVQTILDAAPP-- 175 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R + FSATL +R+LA + + + E++ I + +++ + + + + L + Sbjct: 176 ERQLVFFSATLPASIRKLAARHLRTPMTLTMPAEERDTPAIAQRVYFVNFKNRAQALTRV 235 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E P A+IF TK +E+ L DGHR L GD+ Q R +L F R L+++ Sbjct: 236 LAAEDPASALIFTRTKQAADELAEQLQDDGHRAEALHGDLNQSAREAVLGRFRRQQLNVV 295 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL I ++HV NYD+P D E Y+HRIGRTGRAG +G +IS A L Sbjct: 296 VATDVAARGLDIADLSHVINYDMPQDGESYIHRIGRTGRAGRTGVAISFALPTDRYRLRL 355 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRL 399 IE G ++ V P A + + RL Sbjct: 356 IERATGSTL-VPAKIPSAGEIQVRRTERL 383 >UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3 Tax=Desulfovibrio vulgaris RepID=Q725W5_DESVH Length = 532 Score = 539 bits (1390), Expect = e-152, Method: Composition-based stats. Identities = 141/401 (35%), Positives = 208/401 (51%), Gaps = 19/401 (4%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 + + F D L ++++A+E+ GF +PIQ++A+P L GRDV GQAQTGTGKT AF Sbjct: 3 SVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLP 62 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYD 125 + D +AL++ PTRELA+Q+ LA+ G+++ YGG + Sbjct: 63 LLQRI-------DAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIE 115 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q L G +++GT GR++D+ + + LG +++ VLDEAD M D+GF +DI + Sbjct: 116 PQASALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSE 175 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 MP + FSAT+ + ELA + E + V Q T ++ F ++ Sbjct: 176 MPEW--VQSAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVRPFRRVD 233 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 + + + P +AI+F TK +E+ L G L GD+ Q +R R++ F G Sbjct: 234 AVCRIFDAYIPRKAIVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAG 293 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 + +LVATDVAARGL + V V N+DLP+D E YVHRIGRTGRAG +G + S A Sbjct: 294 GISVLVATDVAARGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAGRDV 353 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGN 406 L I+ G I +P +R RTG Sbjct: 354 YKLRDIQRVTGSRIDRRA---------MPTAADASRARTGQ 385 >UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=Gammaproteobacteria RepID=B0TQ71_SHEHH Length = 437 Score = 539 bits (1389), Expect = e-152, Method: Composition-based stats. Identities = 146/402 (36%), Positives = 225/402 (55%), Gaps = 9/402 (2%) Query: 24 LEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADR-KV 82 + +KG+ T IQA A+P LAGRD+ AQTGTGKT AF L+ + ++ K Sbjct: 40 VAQKGYQQPTAIQAEAIPAILAGRDIMASAQTGTGKTAAFTLPLLQRLIDKSSSDEQSKA 99 Query: 83 NQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTT 142 + L++APTRELAVQ++ + A T + + YGG D Q L +GVD+++ T Sbjct: 100 KRASVLVLAPTRELAVQVNTNVSQYAVNTDVSSIVIYGGVSIDAQATKLAAGVDVIVATP 159 Query: 143 GRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLS 202 GRL+D+ ++ +NL I+ +V DEADRM D+GF+ +I + +++P +R +LFSAT S Sbjct: 160 GRLLDHVRRGTLNLSDIEYLVFDEADRMLDMGFMDEINAILKQLPA--KRQTLLFSATFS 217 Query: 203 YRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIF 262 + EL+ + + IEV+ + I++ ++ +E K LL LI + + ++F Sbjct: 218 SAIFELSKKLLQKPLRIEVDKANSAANSIEQVVYAVDSERKTELLCHLINKSAWQQVLVF 277 Query: 263 ANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHI 322 + K + I + A G GD+ Q R ++L++F +G + LVATDVAARGL I Sbjct: 278 SRKKQTADLIAQKMLAAGIEAKAFHGDLGQGAREQVLNDFKQGKIKALVATDVAARGLDI 337 Query: 323 PAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVS 382 + V NY++P EDYVHRIGRTGRAG +G +I+L E+ AL L +E+ I +P Sbjct: 338 VELKVVVNYEIPFVAEDYVHRIGRTGRAGNTGKAITLYSEDDALLLEEVESVIDKRLP-- 395 Query: 383 KYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR----NRRRS 420 + + DL K +TR + R+ R ++RR Sbjct: 396 QQWLEGFEPDLTKLEPVTRKNSKAAQRQRAKKRALGADKRRR 437 >UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria RepID=A9ENG9_SORC5 Length = 624 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 142/418 (33%), Positives = 210/418 (50%), Gaps = 11/418 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 +T + F+ + P ++ L + G+ TPIQ A+P L GRD+ GQA TGTGKT A Sbjct: 2 ETTPSSASFAALGIAPALLGVLAELGYEEPTPIQREAIPHLLTGRDLLGQAATGTGKTAA 61 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F L I P AL++ PTRELA+Q+ G+++ YGG Sbjct: 62 FALPLLQRL----EIGGEPPRLPEALVLVPTRELAMQVAEAMHRYGRRLGVQVLSVYGGQ 117 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 + +QL+ L GV +++ T GR +D+ + + L I+ VVLDEAD M D+GF + + + Sbjct: 118 PFGQQLRALRRGVHVVVATPGRTLDHIGRGTLALDGIRTVVLDEADEMLDMGFAEALEEI 177 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTG---HRIKEELFYPS 239 P A R +LFSATL R+ +A + +++ E+ R+++ + Sbjct: 178 LSATPGA--RQTVLFSATLPPRIAAIAGRHLREPVRVKIAGEKAAPGELPRVRQTAYIVP 235 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K L +++ E P AI+F T++ +E+ L A G+ L G +Q+ R R++ Sbjct: 236 RAHKSAALTRVLDMEDPSSAILFCRTRNEVDELTEALRARGYEAQALHGGFSQEHRDRVM 295 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 F G ++LVATDVAARGL I V+HV NYD+P E YVHRIGRTGRAG G +I+L Sbjct: 296 ARFRAGTAELLVATDVAARGLDIEHVSHVINYDVPCAPEVYVHRIGRTGRAGREGAAITL 355 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNR 417 + +E G I + + + L LTR GA R R Sbjct: 356 VEPREHYLIRNVERLTGQRIEAATLP--TVADLRARRLELTRASLREALIEGGAERFR 411 >UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Proteobacteria RepID=Q0B215_BURCM Length = 511 Score = 538 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 146/395 (36%), Positives = 208/395 (52%), Gaps = 4/395 (1%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T F+ L ++ L+ + TP+Q A+P L G+DV AQTGTGKT F Sbjct: 33 TSMSFASLGLIDPLLRNLQDLNYQTPTPVQVKAIPAVLGGKDVMAGAQTGTGKTAGFALP 92 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 L+ N+ R L++ PTRELA Q+ + L+ AYGG + Sbjct: 93 LLQRLVQQGPAV--SSNRARVLVLVPTRELAEQVLQSFVAYGKGLDLRFLAAYGGVSINP 150 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+ L GVD+L+ T GRL+D +QN + ++ +VLDEADRM DLGF +++ +F + Sbjct: 151 QMMKLRKGVDVLVATPGRLLDLNRQNAVQFDQVETLVLDEADRMLDLGFARELNAVFAAL 210 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P QR +LFSAT + +R +A + + I V P TG +IK+ + K L Sbjct: 211 PV--QRQTLLFSATFTDDIRTMAASILRSPVNISVSPPNVTGSKIKQWVVTVDKRNKPDL 268 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ E D A++F T++ E + L G+ V + GD Q RLR L+ F G+ Sbjct: 269 FMHLVAENNWDHALVFVKTRNGVEYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKTGE 328 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + +LVATDVAARGL I + V N DLP +DYVHRIGRTGRAGASG ++SL C + A Sbjct: 329 VQMLVATDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAP 388 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L AIE IG ++ + +P+ + Sbjct: 389 QLAAIEALIGQTLRREEEPGFEAEHRVPETSSTGQ 423 >UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicase n=5 Tax=Proteobacteria RepID=Q4FSS4_PSYA2 Length = 567 Score = 537 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 147/381 (38%), Positives = 214/381 (56%), Gaps = 11/381 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T + F+D + ++ ALE+ G+ + TPIQA A+P L GRD+ AQTG+GKT AF Sbjct: 39 TDENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAF 98 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGD 122 + L + +ALI+ PTRELA Q+H ++ GL GG Sbjct: 99 VIPVLDRLSRATSFDKL----TKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGA 154 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y+ Q+ L+ GV +++ T GRL+D+ ++L +++++VLDEADRM D+GF DI + Sbjct: 155 PYNGQITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDI 214 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-E 241 R P R ++ SAT V ++A N E + ++ E I+E+++Y + + Sbjct: 215 LRAAPID--RQTIMCSATWDGPVGKIAASFTKNPERVSIKVESA---HIEEKVYYCDDFD 269 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K RLL ++ + ++ IIFA TK E++ L GH+ L GD+ Q KR RI+ + Sbjct: 270 HKNRLLDKIVCHKDMEQIIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQD 329 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 G ILVATDVAARGL +PA++HV NYDLP EDYVHRIGR GRAG +G +ISL Sbjct: 330 LRNGKCKILVATDVAARGLDVPALSHVINYDLPRQTEDYVHRIGRCGRAGRTGVAISLCS 389 Query: 362 EEYALNLPAIETYIGHSIPVS 382 + L AI Y+ + S Sbjct: 390 MDDRPQLNAINRYLDRKMEAS 410 >UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales RepID=C5PZD1_STAAU Length = 517 Score = 537 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 135/377 (35%), Positives = 208/377 (55%), Gaps = 9/377 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 K + Q F + + V++LE GF TPIQ ++P L G D+ GQAQTGTGKT A Sbjct: 7 KRRIILQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGA 66 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F ++ ++LI+APTRELA+Q+ + G+++ +GG Sbjct: 67 FGIPLIEKVVGK--------QGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGM 118 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 ++Q+K L+ G I++GT GR+ID+ + + I ++LDEAD M ++GFI D+R++ Sbjct: 119 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 178 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++P QR MLFSAT+ ++ L + M + + I+ + + +I+E E Sbjct: 179 MDKIPAV-QRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELE 237 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K ++ P+ AI+F TK R +E+ L + G++ L GD+ Q KRL +L +F Sbjct: 238 KFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKF 297 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 ++ILVATDVAARGL I V+HV+N+D+P D E Y HRIGRTGRAG G +++ Sbjct: 298 KNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNP 357 Query: 363 EYALNLPAIETYIGHSI 379 + IE G + Sbjct: 358 IEMDYIRQIEDANGRKM 374 >UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A n=3 Tax=Alteromonadales RepID=Q3IJ60_PSEHT Length = 616 Score = 537 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 130/385 (33%), Positives = 208/385 (54%), Gaps = 11/385 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F L P +++A+E+ G+ + IQA +PL L +DV G AQTGTGKT AF + Sbjct: 6 TFESLNLSPAILKAVEELGYKTPSEIQAQCIPLLLERKDVLGLAQTGTGKTAAFALPLLN 65 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGDGYDKQL 128 + D V QP+ L++ PTRELA+Q+ E A+ G+++ YGG Y QL Sbjct: 66 NI-------DPSVKQPQILVLTPTRELAIQVAEAFEQYAKHVRGIEVLALYGGQSYSIQL 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L G +++ T GRLID+ + I A+Q +VLDEAD M +GFI D+ + + P Sbjct: 119 SALRRGAQVIVATPGRLIDHINRGTIKFDALQALVLDEADEMLRMGFIDDVESIMEKTP- 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 ++ LFSAT+ +++ ++ + MNN E + + T +++ +F+ ++ K + + Sbjct: 178 -REKQTCLFSATMPKQIQNISSKYMNNPEQVHISARNSTVSSVEQ-VFWNASIHKNKAIV 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +E E + AI+F T++ ++ L +G L GD+ Q+ R R ++ G L+ Sbjct: 236 RFLEAEQYEGAIVFVRTRNDTVQLAELLEREGFSAAPLNGDMNQQARERTVERLKSGMLN 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +++ATDVAARGL + ++ V NYD+P D E YVHRIGRTGRAG +G +I L Sbjct: 296 VVIATDVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKAILFVKHNERYLL 355 Query: 369 PAIETYIGHSIPVSKYNPDALMTDL 393 I + I + ++ + Sbjct: 356 KNIIRHTNSDIAQVELPTAKIVEEK 380 >UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=Anaerococcus RepID=C7RHZ9_ANAPD Length = 536 Score = 537 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 131/378 (34%), Positives = 203/378 (53%), Gaps = 11/378 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF++ + +++ A++ G+ +PIQ ++P L G D+ G++QTG+GKT AF Sbjct: 1 MKFNELNIGNEILRAIDDLGYEKPSPIQEESIPHLLEGNDLIGKSQTGSGKTAAFAIPII 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQ 127 + ++ +ALI+ PTREL +Q+ + E L + +K+ YGG +Q Sbjct: 61 ENIEAN--------GITQALILCPTRELCIQVSKEIEKLYKYKKEIKILSVYGGSHIVRQ 112 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 +K L+ GV+I++GT GRL+D ++ + L ++ VVLDEAD M+D+GF D++++ R Sbjct: 113 IKSLKKGVEIVVGTPGRLMDLMRRKVLKLDQLKTVVLDEADEMFDMGFRDDMKFILDRTN 172 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 P R FSAT+ ++E + N ++++ ++ T RI + K L Sbjct: 173 PN--RQTCFFSATMGPEIQEFSKLYQTNPYEVKIKSKEVTVDRIDQYYIKLKESMKEEAL 230 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+E + AI+F NTK + + + L + V L GD+ Q R +++ +F + Sbjct: 231 MRLLEIHKANLAIVFCNTKRKVDRLVESLTKKNYLVDGLHGDLKQSSRDQVMKKFRNKTI 290 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATD+AARGL + V VFNYDLP E YVHRIGRT RAG SG S SL Sbjct: 291 QILVATDIAARGLDVDDVDIVFNYDLPQLDEYYVHRIGRTARAGKSGLSFSLISGRDNNR 350 Query: 368 LPAIETYIGHSIPVSKYN 385 L IE Y +I Sbjct: 351 LRQIENYTKANIKQMPVP 368 >UniRef50_P19109 ATP-dependent RNA helicase p62 n=11 Tax=Eukaryota RepID=DDX17_DROME Length = 719 Score = 537 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 128/380 (33%), Positives = 204/380 (53%), Gaps = 13/380 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 Q FS+ L V++ + ++G+ T IQA P+ ++G + G A+TG+GKT+ ++ Sbjct: 281 QDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAI 340 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ + + ++ + P AL++APTRELA QI A ++ ++ +GG Q+ Sbjct: 341 VHINNQQPL--QRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQM 398 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ G +I+I T GRLID+ NL +VLDEADRM D+GF IR + ++ P Sbjct: 399 RDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRP 458 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLL 247 R +++SAT V++LA + + N I + E H I++ + K L Sbjct: 459 D--RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKL 516 Query: 248 QTLIEE-----EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 +TL+ + E P + IIF TK R + + + + G R G + GD +Q +R +L EF Sbjct: 517 KTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREF 576 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G +ILVATDVAARGL + + +V N+D P + EDY+HRIGRTGR+ G S + + Sbjct: 577 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 636 Query: 363 ---EYALNLPAIETYIGHSI 379 + A L + I Sbjct: 637 NNAKQAKALVDVLREANQEI 656 >UniRef50_D1INE6 Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=7 Tax=Eukaryota RepID=D1INE6_VITVI Length = 1180 Score = 537 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 125/367 (34%), Positives = 195/367 (53%), Gaps = 12/367 (3%) Query: 20 VVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIAD 79 ++ + GF TPIQA + P+ L RD+ A+TG+GKT+ +L F +L I + Sbjct: 33 LLFQVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHL---KRIRN 89 Query: 80 RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILI 139 P L+++PTRELA QI +A ++ L YGG QL+ L+ G DI++ Sbjct: 90 NPQMGPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVV 149 Query: 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSA 199 T GRL D + ++L + +VLDEADRM D+GF IR + + +P +R ++++A Sbjct: 150 ATPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPA--RRQTLMYTA 207 Query: 200 TLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPD 257 T VR++A + + N + + E I + + EK + L+ ++ + P Sbjct: 208 TWPKEVRKIAADLLVNPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPG 267 Query: 258 -RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVA 316 + IIF +TK C+++ +L + GD +Q +R +L++F G +LVATDVA Sbjct: 268 SKIIIFCSTKKMCDQLARNLTRP-FGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVA 326 Query: 317 ARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYI- 375 ARGL I + V NYD P EDYVHRIGRTGRAGA+G + + E+ A + + Sbjct: 327 ARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLE 386 Query: 376 --GHSIP 380 +P Sbjct: 387 GANQRVP 393 >UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME Length = 630 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 130/384 (33%), Positives = 199/384 (51%), Gaps = 12/384 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F L V++ ++K G+ TP+Q ALP+ + GRD+ AQTG+GKT AF Sbjct: 196 ESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPII 255 Query: 69 HYLLSHPA--IADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 + LL + +P+ +I++PTREL +QI + + LK +AYGG Sbjct: 256 NTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSILKTVVAYGGTSVMH 315 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR- 185 Q L +G IL+ T GRL+D+ ++ + ++Q +VLDEADRM D+GF+ I + Sbjct: 316 QRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLPSIEKMVDHE 375 Query: 186 -MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 M P +R ++FSAT V+ LA +NN ++ V +++ + + +K Sbjct: 376 TMVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACSDVEQNFYEVARNKKK 435 Query: 245 RLLQTLIEEEWP----DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 LL+ ++E E ++F K + + I L+ + + + GD Q++R L Sbjct: 436 DLLKEILERENDSGTLGGTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALA 495 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F G + ILVAT VAARGL I V+HV NYDLP ++YVHRIGRTGR G G + S Sbjct: 496 DFKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRATSFF 555 Query: 361 CEEY----ALNLPAIETYIGHSIP 380 E +L I S+P Sbjct: 556 DPEEDAPLRGDLVRILKQANQSVP 579 >UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIQ5_FIBSS Length = 802 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 140/390 (35%), Positives = 207/390 (53%), Gaps = 10/390 (2%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + F D L P+V+EA++ G+ +PIQA A+P L G ++ G AQTGTGKT AF Sbjct: 120 DESLVTFDDLGLSPEVLEAVKLAGYETPSPIQAKAIPALLQGANLLGTAQTGTGKTAAFS 179 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDG 123 + + + L++ PTRELA+Q+ + A + + + YGG Sbjct: 180 LPLLSRI-------NFNGRETSMLVLTPTRELAIQVSDAIQQYAVKMQNVTVVPVYGGQD 232 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 QL+ L+ I++ T GRLID+ K+ I+LGA++ +VLDEAD M D+GF++D+ + Sbjct: 233 IAIQLRALKRKASIVVATPGRLIDHIKRGSISLGAVKAIVLDEADEMLDMGFMEDVETIL 292 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 + +P QR LFSAT+ V+++ + + E +E + T I + NE K Sbjct: 293 KEIPADAQR--ALFSATMPDSVKKIIDQHLGEYEEARIEGKTTTVENICQRYLLVKNEHK 350 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 + L ++E E D +IF TK E+ L + G V L GD+AQ R R ++ Sbjct: 351 IEALARVLEGEEFDGVLIFVRTKQNTTEVAEKLESRGFNVAPLNGDLAQSMRERTINRLK 410 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G LDI+VATDVAARG+ + ++ V NYD+P D E YVHRIGRTGRAG SG++I Sbjct: 411 MGKLDIVVATDVAARGIDVDRISLVVNYDIPYDTESYVHRIGRTGRAGRSGNAILFITPR 470 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDL 393 L IE I V + ++ Sbjct: 471 EKRMLKTIEKATRQPIDVMEMPTSEQISKK 500 >UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Prochlorococcus marinus RepID=Q31AC4_PROM9 Length = 593 Score = 536 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 139/388 (35%), Positives = 204/388 (52%), Gaps = 10/388 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 E F DF + ++ +L KG+ N TPIQ A+P + GRD+ GQAQTGTGKT AF Sbjct: 49 NENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALP 108 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYD 125 L + + + L+M PTRELA Q+ + + E+T K YGG Y Sbjct: 109 LIEKLADNKELNAK------VLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYR 162 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L+ VD+++GT GR++D+ +Q + +I +VLDEAD M ++GF++DI W+ + Sbjct: 163 NQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQ 222 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P +LFSAT+ +R +A + +N+ I ++ +K I ++ Y K+ Sbjct: 223 LPKNK--QMVLFSATMPNEIRNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLD 280 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ ++E IIF TK I L GH V +L GD+ Q +R +D +G Sbjct: 281 ALKRILELNNEG-VIIFVRTKLLTTSIAEALENLGHSVAVLNGDIPQNQRENTVDRLKKG 339 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 +DILVATDVAARGL + + V NYD P D E Y HRIGRTGRAG SG +I Sbjct: 340 FIDILVATDVAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNHREK 399 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDL 393 L +E I + ++ + Sbjct: 400 HFLRNLENSTRTKIEEINIPSNKIINEK 427 >UniRef50_O26305 ATP-dependent RNA helicase, eIF-4A family n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26305_METTH Length = 425 Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats. Identities = 154/397 (38%), Positives = 223/397 (56%), Gaps = 21/397 (5%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + +FS+F + + AL+ GF + TPIQAL LP+TL G DV G+AQTGTGKT AF Sbjct: 1 MKGLEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L + P+ALI+ PTREL +Q+ + + + + +K+ YGG Sbjct: 61 PVLENLEAE--------RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIG 112 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L GV +++ T GRLID+ ++ ++LG I VVLDEAD M ++GFI DI + Sbjct: 113 NQIAQLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSH 172 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P +R MLFSAT+S + +A + M N + + VE + +I E F E+K+ Sbjct: 173 VPE--RRQTMLFSATVSKPILRIARKYMRNPQVMRVEKKHS--PKIDEFYFKTREEDKVE 228 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL ++ +IF NTK R + + L G+ + GD++Q KR R+++ F RG Sbjct: 229 LLDWILSSNNIRMGLIFCNTKRRVQRLRRQLNRMGYSADEIHGDLSQSKRERVMERFRRG 288 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 D +LVATDVAARG+H+P V V NYDLP + E YVHRIGRTGRAG+SG S +L Sbjct: 289 DFSLLVATDVAARGIHVPDVEAVVNYDLPFENEYYVHRIGRTGRAGSSGKSFTLVVGSEV 348 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402 L I+++ G I +++P P + R Sbjct: 349 HRLRRIQSFTGKRIK---------QSNMPSPEEIRRG 376 >UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C311D7 Length = 481 Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats. Identities = 148/412 (35%), Positives = 221/412 (53%), Gaps = 14/412 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+D L V+EAL G+ N +PIQ A+P LAG D+ GQAQTG+GKT AF Sbjct: 2 TTFADLGLSAPVLEALRDVGYENPSPIQEQAIPPLLAGNDMIGQAQTGSGKTAAFGLPLM 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 Y+ D +AL++ PTREL +Q+ G+ + +GG Q Sbjct: 62 EYV-------DPSDRDVQALVLTPTRELCIQVTQALRSYGARKGIDVVAVFGGAPIRSQQ 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L +G I++GT GR+ D ++ + L + VVLDEAD M DLGF++D+ + P Sbjct: 115 AQLRAGGQIVVGTVGRVKDLISRHSLMLHGTRFVVLDEADEMLDLGFLEDVEKILALTPG 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + R LFSAT+ +R+L+ + N +++V T +++ S +K +L Sbjct: 175 S--RQTALFSATMPPEIRKLSERYLYNPVHVKVRAATLTVDTVEQFSLEMSQRDKPDMLG 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 T++E E PD+AI+F TK RC++++ L G V L GD++Q +R ++ F G L Sbjct: 233 TVLESEKPDQAIVFVRTKIRCDQLYRTLRDRGMNVKALHGDMSQGQRDGVMLSFKSGRLP 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL I +VTHV N+D+P + YVHRIGRTGR G SG +I+ + ++ Sbjct: 293 ILVATDVAARGLDISSVTHVVNFDVPTSPDVYVHRIGRTGRVGRSGRAITFYDSKQKRDI 352 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 AIE + P++ + A + L ++ R + AP N R+ Sbjct: 353 EAIERHTRT--PMAPWTAGARVAALRVEVKPKRHES---KPHDAAPTNGDRA 399 >UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (DeaD) n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SU57_LEPBP Length = 534 Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats. Identities = 130/386 (33%), Positives = 212/386 (54%), Gaps = 11/386 (2%) Query: 1 MSKTHLTEQK-FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGK 59 M+K F F L P++++ + + GF + +PIQ A+PL L G+D+ QAQTGTGK Sbjct: 6 MTKNDTEVGNDFQSFGLRPEILQGITEAGFESPSPIQKQAIPLVLEGKDLIAQAQTGTGK 65 Query: 60 TMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAY 119 T A+ + + + + L++ PTRELA+Q+ + L + G+K Y Sbjct: 66 TAAYGLPCLNRIKVE--------DGMQVLVLTPTRELALQVSDELFKLGKHLGIKTTTIY 117 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y KQ+ + G + + T GRL+D K + +V+LDEAD M D+GF+ DI Sbjct: 118 GGSSYSKQITQVAKGAQVAVATPGRLLDLLKGKELKNFKPSMVILDEADEMLDMGFMDDI 177 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 +F +P +R +LFSAT+ +++LA + + ++++ +K+ I++ + Sbjct: 178 ESIFNLLPT--KRQTLLFSATMPEPIKKLASKYQTHPAHVKIAATEKSSKNIEQVYYIID 235 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 E+ + +++ E P +AIIF TK +++ L+ G+ V L GD+ QK+R ++L Sbjct: 236 EAEREIAVVRILDYENPFKAIIFTKTKKEADDLKSTLSFKGYPVEALHGDLNQKQREQVL 295 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 G + ILVATDVAARGL + ++ V NY LP D E Y HRIGRTGRAG SG +++L Sbjct: 296 KSLHDGRVKILVATDVAARGLDVKDLSLVINYHLPFDSESYTHRIGRTGRAGKSGKAVTL 355 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYN 385 + L ++ G ++ ++ Sbjct: 356 VTTRESRALLRLKGTSGTNLTIAALP 381 >UniRef50_Q54QS3 Probable ATP-dependent RNA helicase ddx3 n=3 Tax=Eukaryota RepID=DDX3_DICDI Length = 712 Score = 536 bits (1381), Expect = e-151, Method: Composition-based stats. Identities = 138/424 (32%), Positives = 205/424 (48%), Gaps = 18/424 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+D L ++ ++ + TP+Q ALP+ L RD+ AQTG+GKT AFL Sbjct: 247 NSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPII 306 Query: 69 HYLLSHPAIADR--------KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +L A + PRAL++APTRELA QI +A + + + + YG Sbjct: 307 SGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVIYG 366 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Q+ L+ G DIL+ TTGRL+D + ++L I+ +VLDEADRM D+GF IR Sbjct: 367 GAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIR 426 Query: 181 WLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP 238 + MP R ++FSAT +++ LA + + N +++V T I + + Y Sbjct: 427 QIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGTT-QNITQRIEYV 485 Query: 239 SNEEKMR-LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLR 297 E+K LL L + +IF TK C+ + L + GD+ Q +R Sbjct: 486 VEEDKNSYLLDYLSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPEREN 545 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 L F LVATD+A+RGLHI V V N+DLP D YVHRIGRTGRAG G +I Sbjct: 546 ALQSFRSFATPFLVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAI 605 Query: 358 SLACEEYAL---NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 S E+ L + IP + ++ +L + ++ + ++ Sbjct: 606 SFFNEKNKPVGAELLKLMKASNQDIP---DWFEKMVHNLRMSKGPSNSKSNSPFNKSYNS 662 Query: 415 RNRR 418 + R Sbjct: 663 HHNR 666 >UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUU6_9BACT Length = 472 Score = 536 bits (1381), Expect = e-151, Method: Composition-based stats. Identities = 150/400 (37%), Positives = 209/400 (52%), Gaps = 10/400 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L+P ++ AL + TPIQ +P + GRDV G AQTG+GKT FL + Sbjct: 1 MSFETLGLNPDLLRALSDLKHESPTPIQKQTIPPIIEGRDVLGVAQTGSGKTGGFLLPSL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H + A +R + + L+++PTRELA QI A + + L GG +Q+ Sbjct: 61 HR--NKRAQGNRTRH--QILVLSPTRELAGQIERSAREYGKYLRSRTVLLVGGTDMRRQI 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L D++I T GRLID+ ++ INL + VVLDEADRM D+GF+ D+ + + + P Sbjct: 117 DFLRRPWDLVIATPGRLIDHMQRGTINLSHVHTVVLDEADRMLDMGFLPDVETILKALHP 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLL 247 +R +LF+ATL R++ L + I +E I +E+ S+ +K LL Sbjct: 177 --ERQTLLFTATLPARIQMLTKTYQKDPVLIRLETASAPPVSIDQEVVAISHGAQKWGLL 234 Query: 248 QTLIEEEW--PDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 +T++ E + +IF TK E++ L A+G L GD +Q +R R+L +F G Sbjct: 235 KTILTEPQTTEGQTLIFTRTKRGAEDLANQLLAEGFPSDALHGDKSQSQRNRVLSKFRAG 294 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 ILVATDVAARGL I VT V NYDLP EDYVHRIGRTGRAG SG +IS Sbjct: 295 QTRILVATDVAARGLDIDTVTCVINYDLPQSPEDYVHRIGRTGRAGRSGRAISFCHPADR 354 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 L IE +G S +P R + PR+ Sbjct: 355 NLLRDIERLLGSS-VPVSPLSPPPQPKGDRPFRSSGPRSS 393 >UniRef50_Q3J811 DEAD/DEAH box helicase-like n=2 Tax=Nitrosococcus oceani RepID=Q3J811_NITOC Length = 431 Score = 536 bits (1381), Expect = e-151, Method: Composition-based stats. Identities = 221/420 (52%), Positives = 281/420 (66%), Gaps = 3/420 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ +E F L +++ ++K GF CTPIQALALPL LAG DVAGQAQTGTGKT Sbjct: 1 MTNPDFSEISFDSLNLAEALIQGIQKAGFAICTPIQALALPLLLAGEDVAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +FL +T LL P+ QPR LI+APTRELA+Q+ DA+ L + T LK +G Sbjct: 61 ASFLLATMQCLLREPSAG--AGQQPRGLIVAPTRELALQVSKDAQFLGQYTNLKCVAVHG 118 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Y KQ +LE G DILIGT GRLIDY +Q I IQVVVLDEADRM+DLGFI+DIR Sbjct: 119 GANYRKQRHLLEQGCDILIGTPGRLIDYYQQRIIGFKKIQVVVLDEADRMFDLGFIRDIR 178 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 ++ RR+PP ++RL MLFSATLS RV ELA+E MNN + + +EP++ T +I E +++P+N Sbjct: 179 YILRRLPPPDKRLGMLFSATLSLRVMELAYEYMNNPQLLRIEPQKVTVDKITERVYFPAN 238 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EEK+ LL L + P AI+F NTKH E++WG+L +G + LL+ DV Q KR R+L Sbjct: 239 EEKISLLLALFKRLVPRHAIVFTNTKHVAEKVWGYLEGNGFKAALLSSDVPQGKRQRLLA 298 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F ILVATDVAARGLHI VTHVFNYDLP D EDYVHRIGRT RAGASG ++S A Sbjct: 299 AFQDRIYPILVATDVAARGLHISTVTHVFNYDLPQDPEDYVHRIGRTARAGASGLAVSFA 358 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 CE+YA +LP IE YIGH + V + + + + ++ RR PR +++S Sbjct: 359 CEDYAFSLPDIEEYIGHKV-VPFSVEEEELLVPEQRVFVSHKDKKKSHRRAPHPRQKKKS 417 >UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gammaproteobacteria RepID=Q12QV2_SHEDO Length = 433 Score = 535 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 140/404 (34%), Positives = 212/404 (52%), Gaps = 5/404 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF F+ P+++ A+ + G+ N TP+Q A+P G DV AQTGTGKT AF Sbjct: 1 MKFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + P + + RALI+ PTRELA Q+ + ++ + + YGG Q Sbjct: 61 QKMHERPMTV--QHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQA 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ G DI++ T GRL+++ +++L ++ +VLDEADRM D+GF DI+ + + + Sbjct: 119 QKLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAV-- 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+LFSAT S V++LA + ++ + I + + T + + ++ K LL Sbjct: 177 NKKRQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAATVSQVVYPVEQRRKRELLS 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI + + ++F T+ +++ L DG ++ G+ AQ R R L EF G + Sbjct: 237 ELIGTKNWQQVLVFTATRADADKLVTELNLDGIPSAVVHGEKAQGSRRRALREFIEGKVR 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVAT+VAARGL I + +V NYDLP EDYVHRIGRTGRAG +G +IS E L Sbjct: 297 VLVATEVAARGLDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTL 356 Query: 369 PAIETYIGHSIPVSKYNPDALMT-DLPKPLRLTRPRTGNGPRRT 411 IE IG I + + +L R G R Sbjct: 357 ADIEKLIGQKIRRITVPGYEVSSRELLLKTIEKRRSFGKKQERN 400 >UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Verrucomicrobia RepID=B1ZWV2_OPITP Length = 409 Score = 534 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 150/415 (36%), Positives = 219/415 (52%), Gaps = 13/415 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F L V+ + G+ + TPIQ A+P+ L G D+ G AQTGTGKT AF Sbjct: 3 FKALQLSAPVLRGVVAAGYTDPTPIQLRAIPVVLGGGDLIGSAQTGTGKTAAFALPILTR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L +H A PR L++ PTRELA Q+ A T L+ +GG GY Q Sbjct: 63 LGAHAA------RAPRVLVLEPTRELAAQVETAFRDFARFTDLRTVAVFGGVGYGLQRTE 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ GVD+++ T GRL+DY INL ++++VLDE DRM D+GF+ ++ + +R P Sbjct: 117 LKRGVDVIVATPGRLMDYLHDRTINLQGVEILVLDEVDRMLDMGFLPVVKDIIQRCP--R 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 QR + FSAT+ ++ +A + N +EV + +K L+ + ++K LL+ L Sbjct: 175 QRQTLFFSATVPPEIQAVASFALRNPTRVEVGVNRSVNESVKHALYPVAADQKFELLEAL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + D ++F+ TKH ++I L A H V +L + +Q +R+ L F G +I+ Sbjct: 235 LARTDFDSVLVFSRTKHGADKIARKLKAANHSVAVLHANRSQNQRIEALAGFKSGKYEIM 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATD+AARG+ + V+HV NYD+P+ EDYVHRIGRTGRA A G + +L E A ++ Sbjct: 295 VATDIAARGIDVAGVSHVINYDVPEKPEDYVHRIGRTGRAQAVGDAFTLVTPENAHDVRD 354 Query: 371 IETYIGHSIPVSK-----YNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 IE +IG IP + Y P +P R G + R R R Sbjct: 355 IERFIGQKIPELRLAGFSYRPFVARPPQVQPPRPPGSLPGQIRHKGSFNRYRGRR 409 >UniRef50_C6CYC6 DEAD/DEAH box helicase domain protein n=89 Tax=Firmicutes RepID=C6CYC6_PAESJ Length = 578 Score = 534 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 145/397 (36%), Positives = 223/397 (56%), Gaps = 9/397 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 +F + P++ + L+ G + TP+Q A+P+ L+G+DV QAQTGTGKT+AF Sbjct: 2 STEFISMGIIPELTDVLQSNGITSPTPVQKKAIPVLLSGQDVIAQAQTGTGKTIAFTLPI 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + D Q +ALI+ PTRELA+QI ++ + LA A G K+ AYGG D Q Sbjct: 62 LQRI-------DIDKEQVQALILTPTRELAIQITSELKKLAAAVGAKVLAAYGGQDVDAQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L + I++ T GRLID+ ++ INLG ++++VLDEAD+M +GF+ +++ + + P Sbjct: 115 IRKLNNSPHIVVATPGRLIDHMRRETINLGKLKMLVLDEADQMLHMGFLPEVQNIVDQTP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R MLFSAT+ +++ LA M I+++ T IK+ + ++ + + L Sbjct: 175 --RARQTMLFSATMPDQIKRLAENYMKTPVDIKIQSANVTLDNIKQLVIETTDRGRQKAL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 ++IE + P A+IF TK R +++ L G L GD+ Q KR +++ F L Sbjct: 233 ISMIETQRPYLAVIFCRTKVRAKKLNKDLQDLGFESDELHGDLTQAKREQVMKRFRDAKL 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARGL + VTHVFN+D+P D E Y+HRIGRTGRAG G +I++A Sbjct: 293 QILVATDVAARGLDVEGVTHVFNFDVPTDSEIYIHRIGRTGRAGQRGTAITIASPYDRAA 352 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 + IE I + D + P + ++ Sbjct: 353 VAHIERSINAILERRTIEADGTIVKNTAPRSSSEGKS 389 >UniRef50_B8A609 Novel protein similar to vertebrate DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 (DDX43) n=2 Tax=Eumetazoa RepID=B8A609_DANRE Length = 719 Score = 534 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 150/406 (36%), Positives = 216/406 (53%), Gaps = 16/406 (3%) Query: 10 KFSD-FALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + FA +P ++E + + GF TPIQ+ A P+ L G D+ G AQTGTGKT+A+L F Sbjct: 278 TFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGF 337 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ P D++ N P L++ PTRELA+QI A+ + G K YGG + Q+ Sbjct: 338 IHMDGQPMPRDKR-NGPGMLVLTPTRELALQIEAECNKYS-YKGFKSICIYGGGDRNAQI 395 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 KV+ SGVDI+I T GRL D INL +I +VLDEADRM D+GF I + + P Sbjct: 396 KVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRP 455 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLL 247 R ++ SAT VR LA + + + V + + +++ + + +EK + Sbjct: 456 D--RQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYV 513 Query: 248 QTLIEEEWP-DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 I P D+ +IF K + +++ L G V L GD Q R L +F G Sbjct: 514 FDFIHRMEPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDFKDGR 573 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + ILVATD+A+RGL + +THVFNYD P + E+YVHR+GRTGRAG SG S++L E Sbjct: 574 VRILVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTREDWR 633 Query: 367 ---NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPR 409 L I G +P + L+ + + R + GPR Sbjct: 634 VAAELITILERSGQDVP------EELVLMAERYEKHRREKEMFGPR 673 >UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1F3_DESAD Length = 493 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 145/415 (34%), Positives = 214/415 (51%), Gaps = 11/415 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F+ +++ + G+ TPIQ A+P L GRDV G AQTGTGKT AF Sbjct: 1 MSFKQFSFDRRIMAGIHACGYETPTPIQTKAIPEVLKGRDVMGLAQTGTGKTAAFALPIM 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LL + R L++APTRELA+QIH + L G++ +GG G Q+ Sbjct: 61 QRLLEKKFSGQGPI---RVLVLAPTRELALQIHENFMELGVEAGIRSAAVFGGVGAMPQI 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + +++ GRL+D Q I L + +VLDEADRM D+GF+ DIR + ++P Sbjct: 118 QAARRSS-VIVACPGRLLDLMNQGVIKLDKVDTLVLDEADRMLDMGFLPDIRKIMSKLP- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+LFSAT+ +R+LA + + ++V ++ + S K LL Sbjct: 176 -QRRQNLLFSATMPDDIRDLADKILYRPATVQVAN-TAPAKTVEHVFYPVSQHLKNNLLF 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E+ D ++F TKH+ + + LAA GH+ L G+++Q +R R LD F G Sbjct: 234 KVLEQTDYDSLLVFTRTKHKAKNLARRLAARGHKATFLQGNMSQNQRQRALDGFRDGSFK 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ++VATD+AARG+ +THV N D+PD E Y HRIGRTGRAG SG + S + + Sbjct: 294 VMVATDIAARGIDCDRITHVVNLDVPDTAETYTHRIGRTGRAGRSGSAFSFVTRDDLRLM 353 Query: 369 PAIETYIGHSIP---VSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 IE +G+SI + ++ D T P P + R R+ R R Sbjct: 354 REIEKAVGYSIEHRTLEDFDYDKPNTH-PAPAKRGGGRKPAADRKPAGERRPGRG 407 >UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE59_GEMAT Length = 498 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 136/377 (36%), Positives = 202/377 (53%), Gaps = 7/377 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FS LHP + + L++ GF TPIQ A+P L GRDV A TG+GKT AFL Sbjct: 3 MTFSSLQLHPSLQQGLKELGFARPTPIQGEAIPPALEGRDVLACAMTGSGKTYAFLLPIL 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L+S P RAL++ PTRELA QI + + T L +GG G Q Sbjct: 63 HQLMSKPR------GNTRALVLTPTRELAAQILESLQDVTTHTPLTGAAVFGGVGMGPQE 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 SGVD+++ T GRL+D+ +Q + L ++ +VLDEADRM D+GF+ +I+ + R +P Sbjct: 117 HAFRSGVDVIVATPGRLLDHFRQPYAKLDQLEYLVLDEADRMLDMGFLPEIKKILRHLP- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R + FSAT+ + L E +N + ++ + I + ++ S E K LL Sbjct: 176 NRKRQTLFFSATMPPPIAALTQEMLNKPVTLNLQRQAAPAKGITQAVYPVSQELKSALLV 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L++ +A++F TKHR + L G + + G+ +Q +R + L F G Sbjct: 236 ALLKRGDMPQALVFTRTKHRANRLASQLVTAGIKAERIHGNRSQSQRTQALAGFKDGSYQ 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ + A+ HV N+D+P EDY+HR+GRT RA A+G + + E L Sbjct: 296 VLVATDIAARGIDVEALGHVVNFDVPVAAEDYIHRVGRTARAEATGEAFTFVSPEEEGEL 355 Query: 369 PAIETYIGHSIPVSKYN 385 IE I ++P Sbjct: 356 KLIERAIKRALPRVTVP 372 >UniRef50_UPI00006CD03A P68-like protein, putative n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD03A Length = 699 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 126/383 (32%), Positives = 195/383 (50%), Gaps = 26/383 (6%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQAL-------------------ALPLTLAGRDVA 50 K+++ ++ +E F PIQA P+ L+G D+ Sbjct: 195 KWNETKFPKYIMSVIEDSKFSEPMPIQAQYVTNKKQKKKYKMYECSFIPFPIVLSGHDLI 254 Query: 51 GQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA 110 G AQTG+GKT++F+ ++ + + + P AL++APTRELA QI Sbjct: 255 GIAQTGSGKTLSFMLPALVHINAQDPV--KPGEGPIALVLAPTRELANQIQEQCFKFGSK 312 Query: 111 TGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRM 170 + YGG Q K L +G DI+I T GRLID+ + N I+L + +VLDEADRM Sbjct: 313 CKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDEADRM 372 Query: 171 YDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEP-EQKTG 228 D+GF IR + ++ P R ++FSAT VR LA + + + +I++ E Sbjct: 373 LDMGFEPSIRKIVGQIRPD--RQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVN 430 Query: 229 HRIKEELFYPSNEEKMRLLQTLIEEEWP-DRAIIFANTKHRCEEIWGHLAADGHRVGLLT 287 + I +++ +K ++ ++ D+ IIF TK C+++ L D R + Sbjct: 431 NDIDQQVEIIDKSQKYDRVKEILSTMTRSDKTIIFTQTKKDCDDLSKALQTDNIRNICIH 490 Query: 288 GDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRT 347 GD +Q+ R +++D F G ++ L+ATDVA+RGL + + V NYD P EDYVHR+GRT Sbjct: 491 GDKSQRDRDKVMDLFKTGRVNTLIATDVASRGLDVKDIKLVINYDFPKQIEDYVHRVGRT 550 Query: 348 GRAGASGHSISLACEEYALNLPA 370 GRAGA G +IS + + Sbjct: 551 GRAGAQGKAISFLDQYEDKKISK 573 >UniRef50_C8PPF9 ATP-dependent RNA helicase DbpA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PPF9_9SPIO Length = 605 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 168/414 (40%), Positives = 238/414 (57%), Gaps = 5/414 (1%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + FS+F L +++ LE+ G+ CTP+Q + G D+ Q+QTGTGKT A+L + Sbjct: 11 QMNFSNFNLDSHLLQGLEEAGYIECTPVQEQVFSAGMDGSDLYVQSQTGTGKTAAYLVTL 70 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 +L+ + R ALI+ PTRELAVQ+ +A L + TGL+ YGG GY +Q Sbjct: 71 MQRMLAQGTESRRP-----ALILVPTRELAVQVEEEAHKLGKYTGLRAASFYGGVGYQQQ 125 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L++GVD++IGT GR+ID K + L + +V+DEADRM+D+GF D+R L + Sbjct: 126 EEALKNGVDLIIGTPGRVIDLEKSKTMKLKHVGFLVIDEADRMFDMGFYPDLRSLLSVLS 185 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 A +R MLFSATL+ V+ LA+E +A+ I ++ + T I ++LF+ + ++KM LL Sbjct: 186 KAEERQTMLFSATLNTWVKNLAWEYTIDAKEITIDADNVTVDEINQKLFHVAADQKMSLL 245 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 ++ E P+ IIF NTK E + L +G+ L GD+ Q KRL I+D F G L Sbjct: 246 LGILRNEKPENTIIFCNTKKTTEIVAKRLRINGYATEFLIGDLPQPKRLHIIDSFKAGKL 305 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATDVAARG+ I + V NYDLP++ E+YVHRIGRT RAG +G + SL E+ N Sbjct: 306 TCLVATDVAARGIDINDLAMVINYDLPNEAENYVHRIGRTARAGKTGAAYSLCSEQDVYN 365 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 LP IE YI IPV + D + R R G + R G Sbjct: 366 LPDIEKYIEAKIPVVIPGEEDFEKDRSADQYIRLDRDSADEERGGRFGRKPRPG 419 >UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Clostridium RepID=B8I5B1_CLOCE Length = 542 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 137/419 (32%), Positives = 217/419 (51%), Gaps = 14/419 (3%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F++ + +++A++ GF T +Q+ A+P L D+ ++TG+GKT F S Sbjct: 2 NNTFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSI 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + + + P+ LI+ P RELAVQ+ D +A+ K YG + + Sbjct: 62 LQ-------LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLE 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++L GV I+ GT GR+ D+ ++ I+ +VLDEADRM D+GF+ + + + +P Sbjct: 115 TQILNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R+ +LFSAT+ + + MNN IE+E + KT I + + + EK L Sbjct: 175 --KERITLLFSATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVYYRVNYNEKNTQL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+ E P+ +IF NTK + + L G+ L GD+ Q KRL + +F +G Sbjct: 233 NRLLIVEKPESCMIFCNTKAAVDRVQSFLGKKGYSSRALHGDIPQSKRLNTIQQFKQGKF 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARG+HI ++ V NYD+P+D ++YVHRIGRTGRAG G + SL + ++ Sbjct: 293 HILVATDVAARGIHIEDLSLVINYDVPNDKDNYVHRIGRTGRAGHEGRAFSLVTGDDIIS 352 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRL---TRPRTGNGPRRTGAPRN--RRRSG 421 L IE +IG I + + T + PR A + ++R+G Sbjct: 353 LYEIEEHIGTLILEEELPDEEAFTKAREEAAQWIKANSLKEKAPRSASADSSVKQKRTG 411 >UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteria RepID=Q8YXJ0_ANASP Length = 513 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 141/369 (38%), Positives = 203/369 (55%), Gaps = 10/369 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + + + VE LEK GF T IQA A+P L+GRDV GQ+QTGTGKT AF Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L D + +A+++ PTRELA+Q+H +GL+ YGG D+Q+ Sbjct: 64 RL-------DPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQML 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ GV I++GT GR+ID ++ ++ L ++ VLDEAD M +GFI D+ + + P Sbjct: 117 QLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQD 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLLQ 248 R LFSAT+ +R L + + + + VE + T ++I + + K R LQ Sbjct: 177 --RQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQVAYLIPRHWTKARALQ 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E E P+ A+IF T+ E+ L A GH V GD++Q+ R R+L F + Sbjct: 235 PILEMEDPETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLTRFRSRQVR 294 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +VATD+AARGL + ++HV NYDLPD E YVHRIGRTGRAG G +I+L Sbjct: 295 WVVATDIAARGLDVDQLSHVINYDLPDSVETYVHRIGRTGRAGKEGTAITLVQPFERRKQ 354 Query: 369 PAIETYIGH 377 E ++ Sbjct: 355 QIFERHVRQ 363 >UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24 Tax=Gammaproteobacteria RepID=Q485D3_COLP3 Length = 455 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 145/424 (34%), Positives = 213/424 (50%), Gaps = 20/424 (4%) Query: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYL 71 L +++A++ G+ N TPIQ A+P+ G D+ AQTGTGKT AF + Sbjct: 4 DSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAI 63 Query: 72 LSHPAIADRK---------------VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLG 116 A RALI+ PTRELA Q+ + + ++ +K G Sbjct: 64 AKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSG 123 Query: 117 LAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFI 176 + YGG Q K+L+ G+D+L+ T GRL+++ +++L ++ +VLDEADRM D+GF+ Sbjct: 124 VVYGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMGFL 183 Query: 177 KDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 DI L + ++ ++FSAT S RV+ LA + + + + I V E T +IK+ ++ Sbjct: 184 TDIEKLL--LAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAVY 241 Query: 237 YPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 + + E K LL LI + ++FA TK + L DG + L GD Q R Sbjct: 242 WVTEERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARN 301 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 + L++F+ G + +LVATDVAARGL IP + V N+ LP EDYVHR+GRTGRAG SG + Sbjct: 302 KALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKSGTA 361 Query: 357 ISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPL--RLTRPRTGNGPRRTGAP 414 ISL + L IE I P L T R R Sbjct: 362 ISLVSPKDERFLENIEQLIERKFERI-VAPGYEFNRLEASEYQEATVKRDSKNRYRAAQE 420 Query: 415 RNRR 418 +N+ Sbjct: 421 KNQN 424 >UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular organisms RepID=Q3AX69_SYNS9 Length = 624 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 135/395 (34%), Positives = 209/395 (52%), Gaps = 10/395 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F F +++ L KG+ + +PIQ A P + GRD+ GQAQTGTGKT AF Sbjct: 70 QSGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPL 129 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDK 126 L + P+ L++APTRELA+Q+ + A LK+ YGG + Sbjct: 130 LERL-------ESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRS 182 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+ L GVD+++GT GR++D+ +Q ++ + +VLDEAD M +GFI D+ W+ ++ Sbjct: 183 QISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQL 242 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P +R +LFSAT+ +R L+ +N+ + ++ + + G I++ K+ Sbjct: 243 P--KERQVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKDQDGKLIRQRAITVPMSHKLEA 300 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 LQ +++ + IIFA TK + L A GH+V +L GDV Q +R R ++ G Sbjct: 301 LQRVLDACGGEGVIIFARTKVITLTVAETLEAAGHQVAVLNGDVPQNQRERTVERLRSGS 360 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 +D+LVATDVAARGL + + V NYD+P D E YVHRIGRTGRAG +G ++ Sbjct: 361 VDVLVATDVAARGLDVERIGLVINYDMPFDSEAYVHRIGRTGRAGRTGEAVLFMTPRERR 420 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 + +E G I + + + + R Sbjct: 421 FIRNLERATGQPIEMMEVPGNTAINQGRLDRLRKR 455 >UniRef50_B7PA03 ATP-dependent helicase (DEAD box), putative n=1 Tax=Ixodes scapularis RepID=B7PA03_IXOSC Length = 685 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 128/402 (31%), Positives = 200/402 (49%), Gaps = 36/402 (8%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + ++ +E + + T IQ+ P+ L+GRD+ G AQTG+GKT+A++ Sbjct: 116 TFQEGCFPDYCMKMIETQNYTTPTAIQSQGWPIALSGRDMVGIAQTGSGKTLAYILPAIV 175 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 ++ P + ++ + P AL++APTRELA QI A +A+ ++ +GG QL+ Sbjct: 176 HITHQPYL--QRGDGPMALVLAPTRELAQQIQQVAADFGKASRIRNTCVFGGAPKGSQLR 233 Query: 130 ------VL-------------------ESGVDILIGTTGRLIDYAKQNHINLGAIQVVVL 164 L +GV+I I T GRLID+ + +NL +VL Sbjct: 234 DWREFGALCPASVAVVQRNSQVIVVICRAGVEICIATPGRLIDFLEAGKVNLRRCTYLVL 293 Query: 165 DEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPE 224 DEADRM D+GF IR + ++ P +++SAT VR LA + + + + + Sbjct: 294 DEADRMLDMGFEPQIRKIVEQIRPDC--QTLMWSATWPKEVRSLAEDFLKDYIQVNIGAL 351 Query: 225 QK-TGHRIKEELFYPSNEEKMRLLQTL---IEEEWPDRAIIFANTKHRCEEIWGHLAADG 280 Q HRI + + +K L L I E ++ +IFA TK + +E+ + +G Sbjct: 352 QLCANHRIVQIVDVCQESDKENKLMELHKEIINEQDNKTLIFAETKKKVDELTRRMRRNG 411 Query: 281 HRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDY 340 + GD +Q +R +L+EF G ILVATDVAARGL + + V NYD P EDY Sbjct: 412 WPSICIHGDKSQSERDWVLNEFRSGRSPILVATDVAARGLDVDDIRFVINYDYPHCSEDY 471 Query: 341 VHRIGRTGRAGASGHSISLACE---EYALNLPAIETYIGHSI 379 +HRIGRT R+ +G + + + A L A+ +I Sbjct: 472 IHRIGRTARSNKTGTAYTFFTPGNMKQAKELIAVLKEANQAI 513 >UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87E35 Length = 427 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 135/419 (32%), Positives = 222/419 (52%), Gaps = 13/419 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F L +++A+++ G+ TPIQ ++P + + V AQTGTGKT AF+ Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + + + PR LI++PTRELA QI + + + GG Y Q Sbjct: 61 DKLTKNRS----EGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQN 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 ++ +DIL+ T GRL+D +Q IN ++V++LDEADRM D+GF+ DIR ++ Sbjct: 117 RMFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNAT-- 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLL 247 + ++ ++FSAT ++++A E + N I ++P+ IK+ +++ N+ K ++L Sbjct: 175 SKKQQMLMFSATFDPPIQKIAQEFLTNPVTISIKPDVSGHKNIKQLIYFADNQSHKQQML 234 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 I+ + +AIIF TK +++ L + L GD++Q R + ++ F R + Sbjct: 235 DHFIKNDEVTQAIIFTATKRMADQLSDQLYHSDIKTSALHGDMSQGSRTKTINRFKRNET 294 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATD+A+RG+ + ++HVFNYD+P EDY+HRIGRTGRA G +ISL Sbjct: 295 KILVATDLASRGIDVKNISHVFNYDMPRFAEDYIHRIGRTGRANNKGIAISLVSPTDREF 354 Query: 368 LPAIETYIGHSIPVSKYN--PDALMTDLPKPLRLTRPRT----GNGPRRTGAPRNRRRS 420 L IE + I ++ ++ + P R ++ R+ G + + R RS Sbjct: 355 LRKIERFTNLKIEIASIPGMEATILKEAKAPKRKSKGRSFVKKGKVFKNEANAKKRIRS 413 >UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alphaproteobacteria RepID=Q28T45_JANSC Length = 644 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 159/408 (38%), Positives = 224/408 (54%), Gaps = 20/408 (4%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T +T F+D L+PKV +A+ + G+ + TPIQA A+P LAGRDV G AQTGTGKT +F Sbjct: 8 TPMT--TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASF 65 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 L A + PR+L++ PTRELA Q+ + + A+ L L GG Sbjct: 66 TLPMITML----ARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVS 121 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 + +Q + ++ GVD+LI T GRL+D+ ++ + L ++V+V+DEADRM D+GFI DI +F Sbjct: 122 FKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIF 181 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFY------ 237 +P R + FSAT++ + + ++N E IEVE + T I++ L Sbjct: 182 GLVPFT--RQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRR 239 Query: 238 -PSNEEKMRLLQTLIEEEWP--DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKK 294 + K +L+ I E AIIF N K + + L + GD+ Q Sbjct: 240 DAQAKMKRDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSH 299 Query: 295 RLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG 354 R+R L F G + +LVA+DVAARGL IP V+HV NYD+P EDYVHRIGRTGRAG +G Sbjct: 300 RMRTLAGFRDGSITLLVASDVAARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTG 359 Query: 355 HSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402 +I+L L AIE I IP ++ DA PK +P Sbjct: 360 VAITLCVPSDEKYLGAIEGLIKQPIPRAEAPMDAGT---PKAETEDKP 404 >UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFI3_CARHZ Length = 430 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 131/385 (34%), Positives = 214/385 (55%), Gaps = 10/385 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 ++F L +++A+ GF TPIQ A+PL L G ++ GQA TGTGKT A+L Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + ++ + + LI+ PTRELA+Q+ + L + ++ YGG ++Q+ Sbjct: 62 QRI--------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQI 113 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GV++++GT GR++D+ + I++V+LDEAD M D+GFI DI + + Sbjct: 114 RGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTL-- 171 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 N++ +LFSATL ++ + + + + +++ +KT I++ + EK+ L Sbjct: 172 TNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLV 231 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ E P +AI+F TK R +E+ L G+ L GD++Q++R + + F G + Sbjct: 232 SILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTE 291 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGL IP V+HV N+D+P + E Y+HRIGRTGRAG G +I+L L Sbjct: 292 LLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLL 351 Query: 369 PAIETYIGHSIPVSKYNPDALMTDL 393 AIE I + + + Sbjct: 352 KAIEEAINKRLKREILPEPVDLEEA 376 >UniRef50_D2VEC4 DEAD/DEAH box helicase n=1 Tax=Naegleria gruberi RepID=D2VEC4_NAEGR Length = 535 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 137/385 (35%), Positives = 205/385 (53%), Gaps = 14/385 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTL-AGRDVAGQAQTGTGKTMAFLTSTF 68 F + LH ++ ++K G+ TPIQ ++P + + RD+ AQTG+GKT AFL Sbjct: 106 TFEEADLHELLMTNVKKSGYTKPTPIQKHSMPAIVTSKRDMMACAQTGSGKTAAFLLPII 165 Query: 69 HYLLSHPAIADRK-----VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 + LL D++ P+A+I+APTREL QI+ + T LK + YGG Sbjct: 166 NALLKSGIHKDKRRFAPNKGNPKAVILAPTRELCQQIYDECRKFIFQTYLKTVVVYGGAS 225 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 Q+K LE GVDIL+GT GR+ D+ ++ +++ +Q +VLDEADRM D+GF IR + Sbjct: 226 SGYQMKQLERGVDILVGTPGRMNDFIQREKLDMSGVQYLVLDEADRMLDMGFEPQIRSIV 285 Query: 184 --RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 MPP RL +L+SAT ++LA + +++ +++V T I + + Sbjct: 286 EGSGMPPKGDRLTLLYSATFPKETQKLALDFLHDELFVQVGIIGGTTDNITQSFYQVDRR 345 Query: 242 EKMRLLQTLI--EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K L ++ ++E ++ ++F K C+ I+ L G + ++ GD Q+ R R L Sbjct: 346 GKQDKLVEVLTEKKEEREKTLVFVQQKSTCDRIYELLTPLGFKCSVIHGDKDQRSRERSL 405 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 +F G +ILVATDVAARGL I V HV NYDLP + + Y+HRIGRTGR G G + + Sbjct: 406 RQFKDGYTNILVATDVAARGLDIEKVAHVINYDLPKEIDSYIHRIGRTGRVGNLGIATAF 465 Query: 360 ACEEYA----LNLPAIETYIGHSIP 380 L I IP Sbjct: 466 FDPSEDGKLCRELVKILKDANQEIP 490 >UniRef50_B6YWR7 DEAD/DEAH box RNA helicase n=3 Tax=Thermococcus RepID=B6YWR7_THEON Length = 403 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 138/413 (33%), Positives = 210/413 (50%), Gaps = 14/413 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGR-DVAGQAQTGTGKTMAFLTST 67 F + L + A+ +KGF T IQ +P L+G D+ GQ+QTGTGKT AF Sbjct: 1 MSFENLGLSEATLVAVRRKGFSQPTDIQKEVIPRLLSGDADIIGQSQTGTGKTAAFALPI 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + D K +A+I+APTRELA+Q+ + + L + + YGG Q Sbjct: 61 IEAI-------DEKEKSVQAIILAPTRELALQVADEIKSLRGRKRVYVYAVYGGQPIGPQ 113 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ LE G +++GT GR++D+ ++ ++L ++ +LDEADRM D+GFI DI +FR P Sbjct: 114 IRALERGTHVVVGTPGRVLDHIRRGTLDLSKVKFFILDEADRMLDMGFIDDIEAIFRETP 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 + ++FSAT+ + LA MN+ E I+V ++ +++E K L Sbjct: 174 KKKR--VLMFSATMPREILRLARRYMNDYEVIKVSSDELVPGMVEQEYIEVVPARKFSTL 231 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + ++ +++ I+F TK E+ L G+ L GD++Q R R F Sbjct: 232 KKILSDDFYG--IVFCATKRETRELSEKLRKQGYSAEALNGDMSQAARERTFWRFKTKRT 289 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARGL + ++H+ NY LP EDYVHRIGRTGR G G +++ Sbjct: 290 RILVATDVAARGLDVQDISHIVNYSLPMTAEDYVHRIGRTGRMGKKGKAVTFIMPGEFKR 349 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPR--TGNGPRRTGAPRNRR 418 L I + G I S+ + + + R RP+ NG R +RR Sbjct: 350 LRYIASVAGVDIQKSELSEELPREYHERYKREERPQRYRKNGRRDYSRGYSRR 402 >UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=Cyanobacteria RepID=UPI0001C33831 Length = 477 Score = 532 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 139/377 (36%), Positives = 207/377 (54%), Gaps = 10/377 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + L V L++ GF N T IQ A+PL L G DV GQ+QTGTGKT A+ Sbjct: 4 SFENLGLSETRVNKLKELGFENPTEIQEKAIPLMLEGHDVLGQSQTGTGKTAAYSLPILE 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + D + + LI+ PTRELA Q+ + L + YGG D+Q++ Sbjct: 64 KV-------DIQDPSVQVLILTPTRELAQQVAEALKDFTVRRRLYILTVYGGQSIDRQIR 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE GV I++GT GR+ID ++ + L +++ VLDEAD M +GFI D++ + ++ P + Sbjct: 117 SLERGVQIVVGTPGRVIDLIERKKLILDSLRWAVLDEADEMLSMGFIDDVKTILKKTPES 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLLQ 248 R FSAT+ +REL + + + I VE Q RI++ ++ K + LQ Sbjct: 177 --RSTACFSATMPREIRELVNQFLKSPVTISVERTQAAPTRIEQNIYMVPRGWSKRKALQ 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E E P+ AIIF TK ++ L GH V G+++Q +R R++ F G + Sbjct: 235 PVLEIEDPESAIIFVRTKQTASDLTTRLQEIGHCVDEYHGNLSQSQRERLVHRFRDGRIK 294 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ++VATD+AARGL + ++HV NYDLPD+ E Y+HRIGRTGRAG +G +IS+ + Sbjct: 295 LVVATDIAARGLDVEGLSHVINYDLPDNSETYIHRIGRTGRAGKTGKAISIVESADRRMI 354 Query: 369 PAIETYIGHSIPVSKYN 385 IE + I + K Sbjct: 355 RQIERKLRQKIDICKIP 371 >UniRef50_B5ZGC1 DEAD/DEAH box helicase domain protein n=3 Tax=Acetobacteraceae RepID=B5ZGC1_GLUDA Length = 427 Score = 532 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 144/411 (35%), Positives = 217/411 (52%), Gaps = 6/411 (1%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F+D +L P ++ AL ++G+ + TPIQA ++P+ L GRD+ G AQTGTGKT AF Sbjct: 2 SMTFADLSLAPTLLRALAEEGYASPTPIQAQSIPMLLEGRDLLGMAQTGTGKTAAFALPL 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 H L P A R L++APTREL QI E + +GG Q Sbjct: 62 LHRLAMAPRPA--PKGGARVLVLAPTRELVSQIADGFESFGRHQPPSVTTIFGGVSQVHQ 119 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L++GVDI++ GRL+D Q +L ++ +VLDEAD+M D+GF + I + +P Sbjct: 120 VNALKAGVDIIVAAPGRLLDLIDQGLCDLSQLEALVLDEADQMLDMGFARPIERIVATLP 179 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R +LFSAT+ + LA + + +E+ P T RI++ + + +K L Sbjct: 180 --KDRHTVLFSATMPKSIATLAESLLRDPAKVEIAPPSTTVDRIEQSVMFVDAADKKAAL 237 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 ++ +A++F K+ E+ + G L G+ +Q +R R LD F G Sbjct: 238 LAMLRTPGIGQAVVFTLQKNIANEVCAFITEAGITAEALHGNKSQGQRERALDAFRSGTA 297 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATD+AARG+ + VTHVFN+DLP E YVHRIGRTGRAG +G +I+L E Sbjct: 298 QVLVATDIAARGIDVDTVTHVFNHDLPSLPESYVHRIGRTGRAGRNGFAITLCDAEQRAW 357 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 L +E IG ++ V +P ++ + + P G P + P+ +R Sbjct: 358 LRDVEREIGRALIVQDDHP--WHSEAARNSTMRPPVLGGAPAKEVKPQKKR 406 >UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFK3_METVO Length = 584 Score = 532 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 139/398 (34%), Positives = 210/398 (52%), Gaps = 4/398 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGR-DVAGQAQTGTGKTMAFLTST 67 +F D + ++E L++KGF T IQ A+P+ L DV GQAQTGTGKT+AF Sbjct: 1 MEFRDLNISESIMERLDEKGFTEATQIQEKAIPIVLDTELDVVGQAQTGTGKTLAFGIPI 60 Query: 68 FHYLLSHPAIADRKVNQ-PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 + RK + +A+I+ PTRELA+Q+H + + + + L+L YGG +K Sbjct: 61 IQKIQEKIEENGRKNKKAVKAIILTPTRELALQVHDEIDSVNKGNKLRLCTVYGGQSIEK 120 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+ L +GVDI+IGT GR+ID+ + + L I +VLDEAD M +LGFI D+ + + Sbjct: 121 QINKLRNGVDIVIGTPGRVIDHLGRRTLKLNEIDFLVLDEADEMLNLGFIDDVEEIMSKC 180 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 ++ +LFSATL + EL M E I V+ + T ++ + +K L Sbjct: 181 KEDCRK--LLFSATLPKSIMELVELHMGEYETIRVKSKALTTELTEQIYYEVKEHDKFEL 238 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ +I++E ++F TK +++ L + + L GD+ QK+R L F Sbjct: 239 LRRIIDKEPGFYGLVFCKTKADVDQLMRRLNDENYSSEALHGDMNQKQRELALSRFKSHK 298 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 +DI++ATDVAARG+ I +THV NYD+P + E YVHRIGRTGRAG G +I+ Sbjct: 299 IDIMIATDVAARGIDINELTHVINYDIPQNPEAYVHRIGRTGRAGNKGTAITFVEPREFR 358 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 I K + +L K + + + Sbjct: 359 RFKYIMKISKSDAKKEKIPDVTEIVELTKTNIIGKLKQ 396 >UniRef50_C5KE40 ATP-dependent RNA helicase ded-1, putative n=6 Tax=Perkinsus marinus ATCC 50983 RepID=C5KE40_9ALVE Length = 695 Score = 532 bits (1372), Expect = e-150, Method: Composition-based stats. Identities = 143/387 (36%), Positives = 212/387 (54%), Gaps = 15/387 (3%) Query: 9 QKFSDFA-LHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 ++F+D + +VE +++ GF TP+Q ++P RD+ AQTG+GKT A+L Sbjct: 206 EQFNDGGEVAAAIVENIKRCGFDRPTPVQKYSIPTLTTRRDLMSCAQTGSGKTGAYLIPA 265 Query: 68 FHYLLSHPAIA-------DRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 H +L+ R+ P LI++PTRELA QIH +A TG++ + YG Sbjct: 266 IHNMLADGPPDATSSGDYGRRKAYPITLILSPTRELASQIHEEARKFCFNTGIRPVVVYG 325 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G QL+ LE G DIL+ T GRL D ++ ++L I++++ DEADRM D+GF IR Sbjct: 326 GADVRTQLRELERGCDILVATPGRLSDLMERFRVSLCQIKMLIFDEADRMLDMGFEPQIR 385 Query: 181 WLFRR--MPPANQ-RLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFY 237 + + MP + R + +FSAT +++LA + + + Y+ V T IK+ + Y Sbjct: 386 RIVEQEDMPSSRDGRQSAMFSATFPREIQQLARDFLKDYIYLTVGRVGSTHGSIKQIMRY 445 Query: 238 PSNEEKMRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 K+R L ++EE+ + ++F TK + +EI L D + + GD +Q +R Sbjct: 446 VDENSKLRDLYRVLEEQTEEGLTLVFVETKRKADEIENMLRRDRYPATSIHGDRSQWERE 505 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 L F G+L ILVATDVAARGL I V V NYDLP++ +DYVHRIGRTGRAG G + Sbjct: 506 EALKAFKSGELPILVATDVAARGLDISHVNLVINYDLPNNIDDYVHRIGRTGRAGNLGTA 565 Query: 357 ISLACEEYALNLPAIETYI---GHSIP 380 I+ E L + T + IP Sbjct: 566 IAFVNEGSKPILRDLWTLLEENKQEIP 592 >UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=Bacteria RepID=DEAD_MYCTU Length = 563 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 135/383 (35%), Positives = 198/383 (51%), Gaps = 12/383 (3%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + F+D +HP+V+ A+ G+ + T IQA +P +AG DV G AQTGTGKT AF Sbjct: 8 PAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAF 67 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGD 122 + D P+AL++ PTRELA+Q+ L + YGG Sbjct: 68 AIPMLSKI-------DITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGS 120 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y QL L G +++GT GR+ID+ ++ ++L + +VLDEAD M +GF D+ + Sbjct: 121 SYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERI 180 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 P LFSAT+ +R+L+ + +++ + + + I + + Sbjct: 181 LSETPEYK--QVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR-- 236 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 KM L ++E E + I+F TK EEI L A G ++GDV Q +R R + Sbjct: 237 KMDALTRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITAL 296 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 GD+DILVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG ++ Sbjct: 297 RDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSP 356 Query: 363 EYALNLPAIETYIGHSIPVSKYN 385 L AIE ++ ++ Sbjct: 357 RELHLLKAIEKATRQTLTEAQLP 379 >UniRef50_Q6APU7 Related to ATP-dependent RNA helicase (RhlE) n=1 Tax=Desulfotalea psychrophila RepID=Q6APU7_DESPS Length = 498 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 166/406 (40%), Positives = 238/406 (58%), Gaps = 6/406 (1%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 +++F DFA+ ++ + F CTPIQ +L LAG+D+ G+A TGTGKT FL Sbjct: 93 KKRFHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGV 152 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 LL+ K PRALI+APTREL +QI DA+ L TG+ YGG Y+KQ Sbjct: 153 MARLLADKKGGLGK-RTPRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQ 211 Query: 128 LKVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 +++L+ G DI++ T GRLID+ + +N Q +V+DEADRM D+GFI D+R + M Sbjct: 212 MELLKRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLDMGFIPDVRRIVSWM 271 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P R ++FSAT+S V L+ + + E +E E +Q T ++++++ + EEK + Sbjct: 272 PKKRDRQTLMFSATISSDVNNLSAQWCVDPEVVEAEADQVTTDTVEQKVYLVTAEEKYNV 331 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L LI+E +R +IFAN K ++ L + LL+GDV Q KR L+ F G Sbjct: 332 LYNLIKENSDERIMIFANMKSETRKLADRLKRNSIDCLLLSGDVPQNKRQSRLESFRTGK 391 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + +LVATDVA RG+HI +++V NY LP + EDYVHRIGRTGRAG +G S+S ACEE + Sbjct: 392 VKVLVATDVAGRGIHIDGISYVVNYTLPYEPEDYVHRIGRTGRAGLAGKSVSFACEEGSF 451 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPK---PLRLTRPRTGNGPR 409 LP IE YIG + P+ L+ PK P+ + + + Sbjct: 452 YLPDIEEYIGAKLDCV-LPPEELLVHAPKGTAPVAVAHKKYKPRKK 496 >UniRef50_D1IXE3 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=8 Tax=Magnoliophyta RepID=D1IXE3_VITVI Length = 797 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 138/432 (31%), Positives = 212/432 (49%), Gaps = 21/432 (4%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 SK + + + L ++++A+E+ G+ +PIQ A+PL L RDV G A+TG+GKT Sbjct: 299 SKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTA 358 Query: 62 AFLTSTFHYLLSHPAIADR-KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AF+ Y+ P +++ + P A++MAPTRELA QI + A G+K+ G Sbjct: 359 AFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVG 418 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G ++Q + G +++I T GRLID ++ + L VVLDEADRM D+GF + Sbjct: 419 GQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVV 478 Query: 181 WLFRRMPPAN---------------QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ 225 + MP +N R +FSAT+ V LA + + N + + Sbjct: 479 GVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG 538 Query: 226 KTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGL 285 K I + + EKM LQ L++E AI+F NTK + + L G+RV Sbjct: 539 KATDLITQHVIMMKESEKMFKLQKLLDELGDKTAIVFINTKKSADNLAKGLDKAGYRVTT 598 Query: 286 LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIG 345 L G +Q++R L+ F ++LVATDVA RG+ IP V HV NYD+P + E Y HRIG Sbjct: 599 LHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 658 Query: 346 RTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 RTGRAG +G + + + ++ + + +P + + Sbjct: 659 RTGRAGKTGVATTFLTLHDSDVFYDLKQML-----IQNNSPVPPELARHEASKFKPGAIP 713 Query: 406 NGPRRTGAPRNR 417 + P R +R Sbjct: 714 DRPPRRNDTESR 725 >UniRef50_A2U4F0 DEAD/DEAH box helicase n=4 Tax=Flavobacteriales RepID=A2U4F0_9FLAO Length = 411 Score = 531 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 138/391 (35%), Positives = 217/391 (55%), Gaps = 3/391 (0%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 +FSD L+ + +A+ + FH T +Q +PL L ++V AQTGTGKT AF Sbjct: 1 MQFSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPII 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + LL A++ + +AL++ PTRELA+QI + + ++ + L+ +GG + Q Sbjct: 61 N-LLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQK 119 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 ++L GVDIL+ T GRLID Q +I+L +++ VLDEAD M D+GFI DI+ + + P Sbjct: 120 EILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCP- 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 ++ +LFSAT+ ++ EL+ + NA +++ PE+ T I + L+Y + K L Sbjct: 179 -RKKQTLLFSATIPEKIDELSKSIVKNATKVDINPEETTAKNIGQLLYYLPKKNKTDLCL 237 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ + IIF TK +++ L +G+ V + GD Q R + +++F Sbjct: 238 HLLRNTINGKIIIFRRTKFAVDKLEQTLIKNGYNVASIHGDKTQGVRNKAIEDFKSKKAS 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 IL+ATDVAARG+ I V + N+D+P+ E YVHRIGRTGRAG SG + S + + Sbjct: 298 ILIATDVAARGIDITNVDAIINFDIPNVPEIYVHRIGRTGRAGKSGIAFSFCSPDENNYI 357 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 +IE I SI V + +P + + Sbjct: 358 ASIENLIEKSIKVIEDHPYPINKPKHTKKQA 388 >UniRef50_B5IG60 DEAD/DEAH box helicase domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IG60_9EURY Length = 451 Score = 531 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 140/380 (36%), Positives = 209/380 (55%), Gaps = 14/380 (3%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + KF D ++ AL++ F T +Q A+PL + GRD+ Q++TG+GKT+AFL Sbjct: 1 MENLKFEDMSISKGTKNALKEHNFVEPTEVQEKAIPLAIKGRDLIVQSKTGSGKTLAFLI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 F L S A+++ PTRELA Q+ A + +A G + + YGG + Sbjct: 61 PIFENLNSGLE----------AIVLVPTRELAQQVERVARSIGKAHGKRTVVIYGGAPME 110 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 +Q+ L+ G ++IGT GR++D ++ ++NL I+ VLDEADRM D+GFI DI+W+ ++ Sbjct: 111 RQIAGLK-GASMVIGTPGRVMDLMRRGYLNLNGIRFFVLDEADRMLDMGFIDDIKWILQK 169 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P MLFSAT+ + LA M N E I + ++ T + + K+ Sbjct: 170 TPKDK--QMMLFSATMPPEIISLARRYMKNPEKIILSEDEITAENVAQYYVEVGEINKIA 227 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L +L+ E + +IF NT+ + + I L G + L GD+ Q R R +D F +G Sbjct: 228 KLSSLLISER-GKYLIFCNTRRKTKNIAEILQKYGFKAFALHGDMRQATRTRTMDAFKQG 286 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 +DILV+TDVAARG+ + +THV NYD+P +DYVHRIGRTGR A G +I+ E Sbjct: 287 KIDILVSTDVAARGIDVHGITHVVNYDVPLYPKDYVHRIGRTGRMDAHGKAITFVTREDK 346 Query: 366 LNLPAIETYIGHSIPVSKYN 385 IE +IG IP + Sbjct: 347 EYFRRIEDFIGKRIPKMEIK 366 >UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bacteria RepID=Q30PP0_SULDN Length = 540 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 133/379 (35%), Positives = 211/379 (55%), Gaps = 10/379 (2%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 ++T F D L +++ +++ GF +PIQA A+P LAGRD+ GQA TGTGKT Sbjct: 7 TQTEEKLITFDDLGLKKEILRSVKDAGFTVPSPIQAAAIPFILAGRDIVGQAHTGTGKTA 66 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AF + + + + L++ PTRELA Q+ + G + YGG Sbjct: 67 AFGLPALNNINPN--------DGVGILVITPTRELATQVSDELFKYGRNIGARTVTVYGG 118 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y++Q+ +++ G +++ T GRL+D K+N + A +VVLDEAD M D+GF+ DI Sbjct: 119 SSYNRQIDLIQRGASVVVATPGRLLDILKKNLLKDFAPSIVVLDEADEMLDMGFLDDINE 178 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 +F +P R +LFSAT+ ++ LA ++N E+I + + T I +E + Sbjct: 179 IFSYLPSN--RQTLLFSATMPKPIKLLAERILDNPEFISITKGETTNTDINQEYYVIEES 236 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 E+ + L++ E ++I+F TK + + L++ G+ L GD+ Q++R ++ Sbjct: 237 ERDDAIIRLMDAEACQKSIVFCRTKSEVDRLSNVLSSAGYLANGLHGDMEQRQRETVIKG 296 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F + +LVATDVAARG+H+ ++HVFNY +P D E YVHRIGRTGRAG G +I+L Sbjct: 297 FKNNGVKVLVATDVAARGIHVDNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLT 356 Query: 362 EEYALNLPAIETYIGHSIP 380 L I+T +G ++ Sbjct: 357 PLEFKELQRIKTKVGTTMT 375 >UniRef50_Q8D2Y1 DeaD protein n=2 Tax=Enterobacteriaceae RepID=Q8D2Y1_WIGBR Length = 583 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 137/388 (35%), Positives = 200/388 (51%), Gaps = 10/388 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + E FS+ L ++ AL G+ +PIQ +P L G DV G AQTG+GKT AF Sbjct: 1 MNKKELSFSELGLKDFILLALNDLGYKKPSPIQEKCIPFLLKGYDVLGIAQTGSGKTAAF 60 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGD 122 + + D K+ P+ +I+ PTRELA+QI L++ + + YGG Sbjct: 61 FLPLLNNI-------DLKLKLPQIIILTPTRELALQIKFACCSLSKYIKEINIIALYGGQ 113 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y Q+K L+ I++GT GR++D + ++NL I VLDEAD M +GFI+D+ + Sbjct: 114 NYSIQIKSLKRNPQIVVGTPGRILDLLNKKYLNLSEITSFVLDEADEMLRMGFIEDVENI 173 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 F + + Q +LFSAT+ + + M + I ++ + T IK+ + Sbjct: 174 F--LKSSKQHQTILFSATMPAAIHRITKRFMKKPKEIRIKASENTRPNIKQNYWIVYGLC 231 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K+ L +E E D IIF TK+ E+ L +G+ L GD+ Q R + L+ F Sbjct: 232 KIEALLRFLEVEIFDAVIIFVRTKNATLEVSDVLEKNGYNSSSLNGDMNQILREKTLNRF 291 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G LDILVATDVAARGL + ++ V NYD+P D E Y+HRIGRTGRAG +G ++ Sbjct: 292 KTGLLDILVATDVAARGLDVDRISLVINYDIPLDVESYIHRIGRTGRAGRTGKALMFVEN 351 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALM 390 L IE I + K L+ Sbjct: 352 RERKILYNIERNIKEKLSQIKLPSVELL 379 >UniRef50_A9NFC3 DEAD box ATP-dependent RNA helicase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFC3_ACHLI Length = 547 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 140/376 (37%), Positives = 194/376 (51%), Gaps = 10/376 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D + ALEK GF TPIQ A+P + G D+ GQAQTGTGKT AF Sbjct: 5 FNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIPMVEK 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQLK 129 D + Q + LI+ PTREL Q++ + L + L++ GG+ Y+KQ K Sbjct: 65 -------TDTSLRQTQGLILTPTRELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFK 117 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ I++ T GR+ID+ + ++L I + LDEAD M +GF DI + + P Sbjct: 118 ELDRKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLKMGFQDDIERILQTTPET 177 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 R +LFSAT+ ++++A N E I++E + T RI + F +EK LL+ Sbjct: 178 --RQTVLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLER 235 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L++ E P AIIF NTK + I L G L GD+ Q +R +++ F L I Sbjct: 236 LLDFENPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSI 295 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL + V + NYDLP E YVHRIGRTGRAG G + + L Sbjct: 296 LVATDVAARGLDVDDVEIIVNYDLPQQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLD 355 Query: 370 AIETYIGHSIPVSKYN 385 + Y I + Sbjct: 356 MLAHYTKADIKRLEVP 371 >UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAN9_9CLOT Length = 563 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 134/402 (33%), Positives = 218/402 (54%), Gaps = 9/402 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + F+ L + +A+E GF N T IQA ++PL AG DV G++QTGTGKT+AF Sbjct: 1 MNSIPFAQLNLSDETGQAIEAMGFDNATDIQAQSIPLIRAGYDVIGRSQTGTGKTVAFGV 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGY 124 + + + N+ + LI+ PTRELAVQ ++ E +A+ G++ YGG Sbjct: 61 PAVELIDT-----EELRNKTQVLILCPTRELAVQACSEIEKIAKYKRGVRAVDIYGGAPM 115 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 D+Q+ L+ G +I++GT GR++D+ ++ + L +++++LDEAD M ++GF +D+ + + Sbjct: 116 DRQIMRLKRGANIVVGTPGRVMDHLRRRTLKLDHLKMIILDEADEMLNMGFREDVETILK 175 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 + P ++R +LFSAT+ + L + + + IE+ +Q T I+++ + KM Sbjct: 176 QTP--DERQTILFSATMPPAILALTKQYQKDPQLIEINRKQVTLDNIEQQFYEVPMGRKM 233 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L +++ P +IIF NTK +E+ L G+ L GD+ Q +R +++D F R Sbjct: 234 DALGIILQYHDPALSIIFCNTKRMVDEVTAFLDRSGYSAEGLHGDMKQSQRTKVMDSFKR 293 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC-EE 363 G ILVATDVAARG+ + V +V NYD+P + E YVHRIGRTGRAG G ++++ Sbjct: 294 GRTKILVATDVAARGIDVNNVDYVINYDVPQNQEYYVHRIGRTGRAGKEGKAVTICSGRR 353 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 L I +I + + R Sbjct: 354 QVDELYHIVRMTKSTIKRESLPSGQDIERRSNEGVVARMEQK 395 >UniRef50_B4MZE1 GK18312 n=1 Tax=Drosophila willistoni RepID=B4MZE1_DROWI Length = 1424 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 122/383 (31%), Positives = 198/383 (51%), Gaps = 7/383 (1%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 + F + L +++ ++K + TPIQ +++P+ AGRD+ AQTG+GKT Sbjct: 1006 ENPPKPVKTFEEAKLRDILMDNIKKSAYTVPTPIQKVSIPVISAGRDLMACAQTGSGKTA 1065 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AFL +++L + ++ +P+A+IM+PTRELAVQI +A A + LK+ + YGG Sbjct: 1066 AFLLPILNHILDKGY--ELEIGKPQAIIMSPTRELAVQIFNEARKFAHNSYLKITIVYGG 1123 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q + + G ILI T GRL+D+ ++ I + VVLDEADRM D+GF + +R Sbjct: 1124 TSVKYQNESITKGCHILIATPGRLLDFVERTFITFEDTRFVVLDEADRMLDMGFSESMRK 1183 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + ++FSAT ++ +A E + + ++ + + + ++ Sbjct: 1184 IITHPTMRKEHQTLMFSATFPEEIQRMAGEFLRDYVFVTIGVIGGACSDVTQTIYEVDKF 1243 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K L ++ + D I+F TK + + + + GD Q +R + L E Sbjct: 1244 NKRAKLMEILRD-GADGTIVFVETKRGADFLASFFSETEFPTTSIHGDRLQSQREQALRE 1302 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +L+AT VA+RGL I V+HV NYD+P +DYVHRIGRTGR G +G + S Sbjct: 1303 FKSGKMKVLIATSVASRGLDIKNVSHVINYDMPSTIDDYVHRIGRTGRVGNNGRATSFFD 1362 Query: 362 EEYAL----NLPAIETYIGHSIP 380 + +L I G +P Sbjct: 1363 SDKDRALAGDLVKILEGSGQEVP 1385 >UniRef50_B3M5L4 GF23818 n=1 Tax=Drosophila ananassae RepID=B3M5L4_DROAN Length = 795 Score = 530 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 136/407 (33%), Positives = 209/407 (51%), Gaps = 9/407 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F +++A+ K + TPIQA A+P L+GRD+ G A+TG+GKT AF+ Sbjct: 265 TSFGHFGFDEPLLKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPLL 324 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 +L+ + + + P LI+APTREL++QI+ +A+ + L + YGG +Q Sbjct: 325 MHLMDQKEL--QPGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQS 382 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K LE G +I++ T GR+ID K NL + +VLDEADRM+ +GF +R + + P Sbjct: 383 KALEQGAEIVVATPGRMIDMVKMKATNLKRVTFLVLDEADRMFHMGFEPQVRSICNHVRP 442 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFY-PSNEEKMR-L 246 R +LFSAT R+ LA + + + I + I + +F P+ +K L Sbjct: 443 D--RQTLLFSATFKKRIERLARDVLTDPVRIVQGDLNEANQDITQSVFVFPNPLQKWNWL 500 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L L++ +IF K E + +L + LL GD+ Q R +++ +F + + Sbjct: 501 LCHLVKFLSEGSVLIFVTKKADAETVANNLLVKEYNCLLLHGDMDQADRNKVITQFKKKE 560 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 DILVATDVAARGL IP + +V NYD+ D + + HRIGRTGRAG G++ +L ++ Sbjct: 561 CDILVATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAFTLVTDKDKE 620 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGA 413 + + + P+ LM K R G R A Sbjct: 621 FAGHLVRNLEG---ADQQVPEDLMELAMKSSWFRSSRFKQGKGRKPA 664 >UniRef50_A2EVI2 DEAD/DEAH box helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2EVI2_TRIVA Length = 598 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 118/375 (31%), Positives = 189/375 (50%), Gaps = 8/375 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + L + + + + TPIQ++++P+ L G D+ G A+TG+GKT AFL Sbjct: 126 TFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTAAFLIPAMV 185 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 ++ + + + P L+++PTRELA QI A+ + ++ +GG G Q Sbjct: 186 HIGLQEPM--YRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQAN 243 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L +++ T GRLID+ + + + +VLDEAD+M D+GF IR + + + Sbjct: 244 DLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRKIIGHI--S 301 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSNEEKMRLLQ 248 R M+FSAT +++LA + + + ++ + + T IK+ + EK+ Sbjct: 302 KDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQVITKCEEFEKLSKCL 361 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ E D+ IIF TK +++ +L G + L GD AQ +R +L +F Sbjct: 362 EVLNEHKDDKIIIFTKTKRTTDDLQENLNMKGFQAYSLHGDKAQNQRDFVLGKFRSCKKG 421 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA--- 365 ILVATDVAARGL + + V NYD P D E YVHRIGRT R G +++ +E Sbjct: 422 ILVATDVAARGLDVNDIDIVINYDFPGDIETYVHRIGRTARGNKEGLAVTFFTDENKNMS 481 Query: 366 LNLPAIETYIGHSIP 380 L I T +P Sbjct: 482 RKLAKIMTQAKQELP 496 >UniRef50_B2S5R2 ATP-dependent RNA helicase, DEAD/DEAH box family n=54 Tax=cellular organisms RepID=B2S5R2_BRUA1 Length = 531 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 146/417 (35%), Positives = 211/417 (50%), Gaps = 5/417 (1%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T F+ + +++ +E G PIQ A+P L G+D+ G AQTG+GKT AF Sbjct: 82 TKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAF 141 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 ++ R+ RALI+APTRELAVQI ++++ + L GG Sbjct: 142 SLPILQKIIGL--GDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVS 199 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 Q+K + G+D+LI T GRL D + ++L + +VLDEADRM D+GFI D++ + Sbjct: 200 KLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIA 259 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 + +R LFSAT+ + LA + + +EV P+ T I + + +EK Sbjct: 260 KAT--HAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGTTASEITQVVHPVPTKEK 317 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 RLL ++ + I+F TKH + + HL D + V + G+ +Q R R L+ F Sbjct: 318 RRLLSAMLTDADMRSVIVFTRTKHGADAVVRHLERDRYDVAAIHGNKSQNARQRALNGFR 377 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G L ILVATD+AARG+ +P ++HV NYDLPD+ E YVHRIGRTGR GASG SI+L Sbjct: 378 DGTLRILVATDIAARGIDVPGISHVVNYDLPDEPETYVHRIGRTGRNGASGASITLYDPA 437 Query: 364 -YALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 L A+E + + + K RT R RR Sbjct: 438 TEESKLRAVERVTRSKLSIKDAPVKLAPAPVAKGPAPQGQRTEQAESRKAPAHKHRR 494 >UniRef50_Q1N6E2 ATP-dependent RNA helicase n=1 Tax=Bermanella marisrubri RepID=Q1N6E2_9GAMM Length = 475 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 167/384 (43%), Positives = 239/384 (62%), Gaps = 2/384 (0%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + + +F DF L +++ +++ GF +PIQA ALP TLAGRD+ G+AQTGTGKT A Sbjct: 92 EPAEGKVRFHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAA 151 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL + LL+ +R ++PRALI+APTRELA+QI DA+ L++ L + GG Sbjct: 152 FLITVLQKLLTVKP-EERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGV 210 Query: 123 GYDKQLKVLESGV-DILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 YDKQ + LE+ V D+++ T GRL+DY +Q + L ++++V+DEADRM D+GFI D++ Sbjct: 211 DYDKQKEQLENEVVDVVVATPGRLLDYLQQGIVYLDQVEMLVIDEADRMLDMGFIPDLKR 270 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + R P + R LFSAT Y V L+ E +E+EPE +K++ Sbjct: 271 IIRGTPEKSIRQTQLFSATYPYDVVALSESWTYKPEQVEIEPESVATETVKQQFISLQET 330 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 +K L +E+E ++IIFAN + C ++ L G + LL+G+VAQ KR++ LD Sbjct: 331 QKDNALIEYLEKENTGKSIIFANRRDTCRDLADRLNKRGVKALLLSGEVAQAKRMKTLDR 390 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F D +LVATDVA RG+H+ +THVFNY+LPDD EDYVHRIGRTGRAG SG +I+ Sbjct: 391 FKSEDGAVLVATDVAGRGIHVDGITHVFNYNLPDDPEDYVHRIGRTGRAGESGTAITFID 450 Query: 362 EEYALNLPAIETYIGHSIPVSKYN 385 E A L +E+Y+G + +Y Sbjct: 451 EYEAYGLMDLESYLGKKVSTDQYQ 474 >UniRef50_A4C3X3 RNA helicase DeaD n=3 Tax=Alteromonadales RepID=A4C3X3_9GAMM Length = 624 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 137/391 (35%), Positives = 214/391 (54%), Gaps = 10/391 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T T+ +F L V++A+ + G+ TPIQ+ A+P LAG+DV G+AQTGTGKT AF Sbjct: 2 TDTTQVRFDQLNLLAPVLQAINEMGYITPTPIQSQAIPSLLAGKDVLGEAQTGTGKTAAF 61 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGD 122 L D + QP+ L++ PTRELA+Q+ A+ GL + YGG Sbjct: 62 GLPLLSRL-------DADLKQPQMLVVCPTRELAIQVAEALTDFAKHIRGLFVATVYGGQ 114 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y QL+ L G I++GT GR++D+ K+ + L ++ VLDEAD M ++GF++DI W+ Sbjct: 115 SYTPQLRDLARGPQIVVGTPGRMMDHIKKGRLKLDNLKACVLDEADEMLNMGFLEDIEWI 174 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++P +Q FSAT+ ++++ + + + ++++ ++ +I ++ + Sbjct: 175 LNQIP--DQTQMAFFSATMPAPIKKITNQFLTDPIHVKIAVQKSDKPKITQKSWTVGRIG 232 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K L+ + E D I+F T++ + HL + G + L GD+ Q+ R RI+++ Sbjct: 233 KTVGLERIAEVVDYDAMIVFVRTRNDTLVLAEHLVSKGFKASALNGDMQQQDRERIVEQL 292 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G ++IL+ATDV ARGL +P +THV NYDLP D E YVHRIGRTGRAG G +I A Sbjct: 293 KNGRINILIATDVVARGLDVPRITHVINYDLPHDSESYVHRIGRTGRAGREGEAILFASH 352 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDL 393 +L +E I V + Sbjct: 353 REVRSLSRLERITEGKIEVFDMPTAEQLGQA 383 >UniRef50_Q1QAQ0 DEAD/DEAH box helicase-like n=5 Tax=Gammaproteobacteria RepID=Q1QAQ0_PSYCK Length = 384 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 169/381 (44%), Positives = 233/381 (61%), Gaps = 4/381 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+D L + A+ GF TPIQA LP TLA +D GQAQTGTGKT FL + Sbjct: 5 TTFTDLPLSAATLRAVSDLGFTELTPIQAKILPHTLANQDAIGQAQTGTGKTATFLLTIM 64 Query: 69 HYLLSHPAIAD--RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 LL P AD R + +PRA++MAPTRELA QI D L + T L GG Y+ Sbjct: 65 EALLKRPFAADEERHLGEPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGTNYET 124 Query: 127 QLKVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q LE VDILI T GRLID + + L ++V+VLDEADRM D+GFI DI+ L R Sbjct: 125 QQHELERQYVDILIATPGRLIDLMHKGMVYLDRVEVLVLDEADRMLDMGFIPDIKRLVGR 184 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 MPP R ++LFSAT + V LA+ ++ E++E+EPE KT + + + + ++K+ Sbjct: 185 MPPNTDRQSLLFSATFNQDVMGLAYRWLHEPEFVEIEPEHKTSELVDQHFYLLTEDQKLE 244 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 ++ +I + ++ IIFAN K + + ++ L GH++ +L+GDV Q+KR + L F G Sbjct: 245 AVERIITDSTVEKVIIFANRKDQVKRLYHKLRQ-GHKIVMLSGDVIQQKREKYLQRFKDG 303 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 +LVATDVA RG+H+ V+HV NY LPD +DYVHRIGRTGRAG +G SIS E+ A Sbjct: 304 HASVLVATDVAGRGIHVDDVSHVINYTLPDQPDDYVHRIGRTGRAGQTGISISFVSEDDA 363 Query: 366 LNLPAIETYIGHSIPVSKYNP 386 N+PA+E ++ + ++ P Sbjct: 364 FNIPALEKHLDTKFKLEQWQP 384 >UniRef50_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N178_SLAHD Length = 657 Score = 529 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 146/408 (35%), Positives = 211/408 (51%), Gaps = 8/408 (1%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T F + L + A+ G+ TPIQ A+P+ L GRD+ A+TGTGKT AF Sbjct: 5 TIATFDESGLSATALAAVYDLGYEEPTPIQQQAIPVVLEGRDLIAAAKTGTGKTAAFALP 64 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 T L K P +I+ PTRELA+QI E +A+ T ++ GG Y Sbjct: 65 TMDKL-----PYAGKGEGPVMVIVTPTRELAMQISEVCETIAKRTNHRVVTLLGGVSYTP 119 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+K L SG DI+I T GRL+D +Q+ +L +QV+VLDEADRM D+GF + + Sbjct: 120 QIKKLRSGCDIIIATPGRLLDLMRQHEADLDLVQVLVLDEADRMLDMGFWPQVSEIVDAT 179 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P ++R +LFSAT+ ++ F +N+ E IE+ T + + + + EK L Sbjct: 180 P--SERQTLLFSATIDRSQDKVMFSLLNHPEIIEISHRGDTADLVDQYIIWTGRREKPAL 237 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L I E+ R I+F TK + L G + D +Q +R R L+ F G Sbjct: 238 LNAFIREKGGFRVIVFTKTKGGADNCTRRLCKIGIGAEAIHADRSQAQRQRALERFREGK 297 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 ++VATDV ARG+ +P V +V NYDLP EDYVHRIGRTGRAG +G+++S + Sbjct: 298 THVIVATDVLARGIDVPEVDYVVNYDLPMMPEDYVHRIGRTGRAGVAGYAVSFVTPDTKN 357 Query: 367 NLPAIETYIGHSIPVSKYNP-DALMTDLPKPLRLTRPRTGNGPRRTGA 413 L +I+ +IG I V ++ + + K L + P+R Sbjct: 358 LLRSIQKFIGEDIQVMEFKAGEDAYEPVGKDHALAASEEEHAPKRKDR 405 >UniRef50_C3RH47 ATP-dependent RNA helicase RhlE n=2 Tax=Bacteria RepID=C3RH47_9MOLU Length = 418 Score = 529 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 143/371 (38%), Positives = 205/371 (55%), Gaps = 4/371 (1%) Query: 27 KGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPR 86 + +PIQ A+P ++GRD+ G A+TGTGKT AF L +++ + Sbjct: 1 MKYDIPSPIQEQAIPAIISGRDIFGCAKTGTGKTAAFALPILQKL-YLRDESEKYPRTIK 59 Query: 87 ALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLI 146 ALI+APTRELA+QI+ E + LK + +GG Q+ + G+D+LI T GRLI Sbjct: 60 ALILAPTRELAIQINETFEAMNPQVNLKSAVIFGGVRQGSQVTKINRGIDVLIATPGRLI 119 Query: 147 DYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVR 206 D Q ++L ++ +VLDEADRM D+GFIKDIR + R +P + MLFSATL ++ Sbjct: 120 DLYNQGLVDLKHVEYLVLDEADRMLDMGFIKDIRKILRFIP--RRHQTMLFSATLPDEIK 177 Query: 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 L + +N+ I + T +I + L++ K +LL L+E AI+F TK Sbjct: 178 HLVSDLLNDPLKIMISSGNVTVEKINQSLYFVDKVNKAKLLIKLLENPQIYNAIVFVRTK 237 Query: 267 HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVT 326 + + L + GD +Q R+R L+ F + +LVA+D+AARG+ I +T Sbjct: 238 RNVDTLCKKLIKAQITCEGIHGDKSQNARVRALNNFKNDKVRVLVASDIAARGIDIDELT 297 Query: 327 HVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNP 386 HV N+DLPD E+YVHRIGRT RAGASG +I+ + L I+ +I IPV NP Sbjct: 298 HVINFDLPDQAENYVHRIGRTARAGASGEAITFCSFQEKALLKDIQKFINQDIPVVD-NP 356 Query: 387 DALMTDLPKPL 397 M DL P Sbjct: 357 YYPMKDLSIPE 367 >UniRef50_A3ZWP8 ATP-dependent RNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWP8_9PLAN Length = 428 Score = 529 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 149/417 (35%), Positives = 212/417 (50%), Gaps = 15/417 (3%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + ++D AL ++ ALE + +PIQA +PL L GRDV GQA+TGTGKT AF Sbjct: 1 MADINYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L P P+ALI+ PTRELAVQ+ + L + + YGG Sbjct: 61 PIIERLEHGP-----NSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLR 115 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L+ I++GT GR+ID + + L ++ VVLDEADRM D+GF DI + RR Sbjct: 116 SQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRR 175 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P +R +L SAT+ + +LA M N E ++ P + I++ F + +K Sbjct: 176 CPE--ERQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISAETIEQRYFTVDHSKKFD 233 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 +L L++ E P +AI+F TK E I L+ V + GD+ Q R R L +F Sbjct: 234 MLVELLKREQPQKAIVFCRTKRGTERITQRLSKKTKLVHCIHGDMQQGARNRALSDFKAS 293 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 +LVATDV RG+ I V+H+ NYD+P+ +DYVHR+GRTGR G G + + E Sbjct: 294 KFRVLVATDVVGRGIDISDVSHIINYDIPEFSDDYVHRVGRTGRMGKEGIAYTFVTPEEG 353 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG-APRNRRRSG 421 L IE I + + A P T TG GP T P ++ G Sbjct: 354 NELTRIEVRIDKLLIRDELPGFA-------PYERTDVDTGPGPAATAIGPDGQKEVG 403 >UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=14 Tax=Viridiplantae RepID=D1H3Q8_VITVI Length = 568 Score = 529 bits (1364), Expect = e-149, Method: Composition-based stats. Identities = 137/377 (36%), Positives = 203/377 (53%), Gaps = 14/377 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F+D LH +++ + + T IQA A+P+ L+GRD+ G A+TG+GKT AF Sbjct: 123 ESFTDMGLHQSIMKDITFHEYTRPTFIQAQAMPVALSGRDLLGCAETGSGKTAAFAIPMI 182 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQ 127 + L+ P + R+ + P AL++APTRELA QI + + + + + + GG +Q Sbjct: 183 QHCLAQPPV--RRGDGPLALVLAPTRELAQQIEKEVKAFSRSLDSFRTAIVVGGTNISEQ 240 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L +GV+I++ T GR I + ++ + +L I VVLDEADRM D+GF IR + + +P Sbjct: 241 RSELRAGVNIVVATPGRFIHHLQEGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLP 300 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 + +LFSAT+ + LA E +NN ++V + + L S EK+ L Sbjct: 301 QKH--QTLLFSATMPMEIETLAQEYLNNPVQVKVGKVSCPTANVSQILEKVSESEKIDGL 358 Query: 248 QTLIEEEWPD---------RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 L+ EE I+F K RC+E+ L A G R L G +Q +R Sbjct: 359 LALLVEEASQAERCGRPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQAEREAA 418 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L +F G +ILVATDVA+RGL + V HV N DLP E+YVHRIGRTGRAG++G + S Sbjct: 419 LRDFRNGATNILVATDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATS 478 Query: 359 LACEEYALNLPAIETYI 375 + + I I Sbjct: 479 FYTDRDVFLVAHIRKAI 495 >UniRef50_Q2BDP3 ATP-dependent RNA helicase n=2 Tax=Bacillus RepID=Q2BDP3_9BACI Length = 543 Score = 529 bits (1364), Expect = e-149, Method: Composition-based stats. Identities = 144/415 (34%), Positives = 222/415 (53%), Gaps = 12/415 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + ++ L +G T +Q A+P+ L GRD+ QAQTGTGKT+AF+ Sbjct: 23 NFKHLGISDPLIHKLAAQGIDEPTAVQEKAIPIVLEGRDIIAQAQTGTGKTLAFILPILE 82 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQL 128 + D +ALI+ PTRELA+QI ++ + L E L + YGG +KQL Sbjct: 83 KI-------DPSNGSTQALIVTPTRELALQITSEVKKLIEDMPDLNVLAVYGGQDVEKQL 135 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L+ I++ T GRL+D+ ++ + L + +VLDEAD+M +GF+ ++ + + P Sbjct: 136 HKLQRQTQIVVATPGRLLDHLRRGTVQLDEVSFLVLDEADQMLHIGFLNEMELIISQTPA 195 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + R MLFSAT+ +R+L+ + + E I +E I++ + ++ K L Sbjct: 196 S--RQTMLFSATMPDDIRKLSKKHLKEPESIRIEKTFVPEKAIEQLAIFTTDRAKQNALI 253 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 + I E+ P AIIF T R +++ L + L GD+ Q KR +++ +F ++ Sbjct: 254 SRIREDRPFLAIIFCRTIRRATKLYDALKSQRFSCEELHGDLTQAKREKVMKKFRNAEIQ 313 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 L+ATDVAARGL + VTHV+NYD+P D E YVHRIGRTGRAG G +++ E+ L Sbjct: 314 FLIATDVAARGLDVEGVTHVYNYDIPQDSESYVHRIGRTGRAGKDGLAVTFYAEKDEAAL 373 Query: 369 PAIETYIGHSIPVSKYNPDALMT-DLPKPLRLTRPR-TGNGPRRTGAPRNRRRSG 421 AIE + +P + A T D K +P+ + RR G +RRR+G Sbjct: 374 KAIEQELNIRLPKEESTATANTTADGEKSSSGDKPKNRSDRDRRAGGAESRRRTG 428 >UniRef50_Q388E8 ATP-dependent DEAD/H RNA helicase, putative n=4 Tax=Trypanosoma RepID=Q388E8_9TRYP Length = 660 Score = 529 bits (1364), Expect = e-149, Method: Composition-based stats. Identities = 127/370 (34%), Positives = 199/370 (53%), Gaps = 8/370 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 FS+ + P ++E +++ G+ TP+Q+L +P L RD+ AQTG+GKT ++L + Sbjct: 158 SFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMACAQTGSGKTASYLIPAIN 217 Query: 70 YLL----SHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 +L + P + + P+ALI+APTREL++QI+ +A T ++ + YGG Sbjct: 218 EILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFTYHTPVRCVVVYGGADPR 277 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF-- 183 Q+ L G +L+ T GRL+D + ++ I+ ++LDEADRM D+GF IR + Sbjct: 278 HQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLDMGFEPQIRMIVQG 337 Query: 184 --RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 MP A QR +L+SAT ++ LA E M +++V T I +++ + + Sbjct: 338 PDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVGSTTENITQDVRWIEDP 397 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 +K + L TL+ E ++F K + + L + GD Q++R L Sbjct: 398 DKRQALLTLLRENEGKLVLVFVEKKRDADYLERFLRNSELACVSIHGDRVQREREEALRL 457 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G +LVATDVA+RGL IP V V YD+P + +DYVHRIGRTGRAG G +IS Sbjct: 458 FKSGACQVLVATDVASRGLDIPNVGVVIQYDMPSNIDDYVHRIGRTGRAGKVGVAISFFN 517 Query: 362 EEYALNLPAI 371 E+ + + Sbjct: 518 EKNRNIVDDL 527 >UniRef50_C8PWG8 Cold-shock DEAD box protein A homolog n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWG8_9GAMM Length = 777 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 150/393 (38%), Positives = 210/393 (53%), Gaps = 19/393 (4%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 +E F+ L +++++ G+ TPIQA A+P L GRD+ AQTG+GKT AF+ Sbjct: 67 SENGFTALGLSGSLLKSIVATGYTTPTPIQARAIPAALEGRDLLLSAQTGSGKTAAFVLP 126 Query: 67 TFHYL---------LSHPAIADRKVNQP---RALIMAPTRELAVQIHADAEPLAEAT-GL 113 H L A R QP +ALI+ PTRELA Q+ A L Sbjct: 127 ILHQLSELQAKEKAAEKTASGKRGRQQPKVVQALILTPTRELANQVQDSIRKYGSAMKDL 186 Query: 114 KLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDL 173 GG Y Q++ L+ GV I++ T GRL+D+ +NL + ++VLDEADRM D+ Sbjct: 187 YSVPLVGGAAYSGQIRALKKGVQIIVATPGRLLDHINAQRVNLSDLTMLVLDEADRMLDM 246 Query: 174 GFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKE 233 GF DI + P R ++ SAT V ++A + E I ++ E T H I E Sbjct: 247 GFADDINAILEATPAH--RQTIMSSATWDGPVGKIAESFTKDPERINIKVE--TAH-IDE 301 Query: 234 ELFYPSN-EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQ 292 ++++ N + K +LL+ LI + +AIIF TK EE+ L H+ L GD+ Q Sbjct: 302 KVYFCDNFDHKNKLLEQLICDPERGQAIIFTATKRSSEEVAERLQQWDHKACYLHGDLPQ 361 Query: 293 KKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGA 352 KR RI+ + G DI+VATDVAARGL +P +THVFNYDLP EDYVHRIGR+GRAG Sbjct: 362 SKRNRIVSDLRSGKFDIVVATDVAARGLDLPNITHVFNYDLPRQVEDYVHRIGRSGRAGR 421 Query: 353 SGHSISLACEEYALNLPAIETYIGHSIPVSKYN 385 +G +I+L + I Y+ I ++ Sbjct: 422 TGIAINLCSRDDRRQFGNIARYLKRDINEAQVE 454 >UniRef50_C4V8Q7 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V8Q7_NOSCE Length = 528 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 131/376 (34%), Positives = 195/376 (51%), Gaps = 9/376 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF +V+ + K F + TPIQA P+ L G+D+ G AQTG+GKT++F+ Sbjct: 128 KFEHAPFENEVLNNFKLKAFTSPTPIQAQGWPMALTGKDMVGIAQTGSGKTLSFVLPALI 187 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + + + R + P L++APTREL +QI + ++ YGG Q + Sbjct: 188 HARAQIPL--RSGDGPIVLVLAPTRELCLQIKDVFDEYCRFFNMRCTAVYGGVSSYTQKR 245 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 + G ++++G GRLID +Q ++ + +VLDEADRM D+GF ++ + P Sbjct: 246 DISMGCEVVVGCPGRLIDLNEQGALHFNRVTFLVLDEADRMLDMGFEPQLKKIIVNTNPD 305 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSNEEKMRLLQ 248 R +++SAT VR LA M N + + + KT +IK+ + + EK L Sbjct: 306 --RQTLMWSATWPKEVRRLAENYMKNFVQLTIGSVELKTNIKIKQIVSVIDSHEKANKLH 363 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 + E+ ++ IIFANTK C+ + L+ G++ + GD +Q R RI+ +F G + Sbjct: 364 ESLNEKKNEKVIIFANTKRMCDNLEDDLSRRGYKAVAIHGDKSQNIRDRIISDFRSGYKN 423 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAG-ASGHSISLACEEY--- 364 IL+ATDVAARGL I V V NYD P++ EDYVHRIGRT R G S S E Sbjct: 424 ILIATDVAARGLDIKNVALVINYDFPNNIEDYVHRIGRTARGDVTEGLSHSFFTSENSAC 483 Query: 365 ALNLPAIETYIGHSIP 380 A L I +P Sbjct: 484 AKELVKILKEANQDVP 499 >UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria RepID=A6KZW9_BACV8 Length = 624 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 129/372 (34%), Positives = 203/372 (54%), Gaps = 11/372 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTL-AGRDVAGQAQTGTGKTMAFLTST 67 + F + + P++++A+++ G+ N P+Q +P L G DV AQTGTGKT AF Sbjct: 2 KTFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLPL 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDK 126 + D K P+ALI+ PTREL +QI D ++ GLK+ YGG + Sbjct: 62 IQKV-------DVKHRAPQALILCPTRELCLQIAGDLNDYSKYIDGLKILPVYGGSSIES 114 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+++L++GV I++ T GRLID ++ L I VV+DEAD M ++GF I + ++ Sbjct: 115 QIRMLKTGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLNMGFTDSINAILEKV 174 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P R ++FSAT+S + +A + +++A+ I + + + + + ++K Sbjct: 175 PED--RNTLMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYAA 232 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ + + IIF T+ +EI L DG+ L G+++Q +R ++ +F + Sbjct: 233 LKRIADYYPQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQRH 292 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 L +LVATDVAARGL + +THV NY LPDD E Y HR GRTGRAG +G SI++ Sbjct: 293 LQLLVATDVAARGLDVNDLTHVINYGLPDDIESYTHRSGRTGRAGKTGISIAIINLREKG 352 Query: 367 NLPAIETYIGHS 378 + IE I Sbjct: 353 KMREIERIINKK 364 >UniRef50_C5CB97 DNA/RNA helicase, superfamily II n=23 Tax=Bacteria RepID=C5CB97_MICLC Length = 611 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 166/414 (40%), Positives = 225/414 (54%), Gaps = 15/414 (3%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 EQ F+DF +HP +VEALE KG + PIQA+ LP+ L G D+ GQA+TGTGKT+ F Sbjct: 36 EQTFADFGVHPAIVEALEAKGIVHPFPIQAMTLPVALGGHDIIGQAKTGTGKTLGFGIPA 95 Query: 68 FHYLLSHPAI------ADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 + A P+ALI+APTRELAVQ+ D A L++ YGG Sbjct: 96 LQRAIGPGEPGWDGLEAKGTAGAPQALIVAPTRELAVQVAGDLTAAAARRPLRIATIYGG 155 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y+ Q++ L+ GV+I++GT GRLID +Q H+ L + VVLDEAD M DLGF+ D+ Sbjct: 156 RAYEPQIEELQRGVEIVVGTPGRLIDLMRQRHLRLDLVNTVVLDEADEMLDLGFLPDVET 215 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEV---EPEQKTGHRIKEELFYP 238 L +P R MLFSAT+ V +A M +I E E T I++ ++ Sbjct: 216 LLAAVPAV--RQTMLFSATMPGPVVAMARRYMTQPTHIRAADPEDEGLTKKDIRQLVYRA 273 Query: 239 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 + +K L+ ++ E R IIF TK + L A G G L GD+ Q R + Sbjct: 274 HHMDKDELVARALQAEGRGRTIIFTRTKRTAARVADELTARGFAAGALHGDLGQGAREQA 333 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L F G +DILVATDVAARG+ + VTHVFN+ P+D + YVHR+GRTGRAG G +++ Sbjct: 334 LRAFRNGKVDILVATDVAARGIDVDDVTHVFNFQAPEDEKTYVHRVGRTGRAGNKGVAVT 393 Query: 359 LACEEYALNLPAIETY--IGHSIPVSKYNPDA-LMTDLPKPLRLTRPRTGNGPR 409 L E I+ +G PV Y+ L +DL P + T+ R R Sbjct: 394 LVDWEDMPRWSLIDKALGLGQPEPVETYSSSPHLFSDLGIP-KGTKGRLPQAKR 446 >UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter RepID=Q17W71_HELAH Length = 494 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 137/378 (36%), Positives = 210/378 (55%), Gaps = 10/378 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F+D L V++++ + GF + +PIQ A+P L GRDV QAQTGTGKT AF Sbjct: 21 KPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPI 80 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + L ++ I AL++ PTRELA+QI + L + T K YGG KQ Sbjct: 81 INNLKNNHTIE--------ALVITPTRELAMQISDEIFKLGKHTKTKTVCVYGGQSVKKQ 132 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + ++ ++I T GRL+D+ K + I+ +VVVLDE+D M D+GF+ DI +F +P Sbjct: 133 CEFIKKNPQVMIATPGRLLDHLKNDRIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLP 192 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 Q +LFSAT+ +++LA + + N I + P T I + + + E+ + Sbjct: 193 SEAQI--LLFSATMPEPIKKLADKILENPIKIHIAPSNITNTDITQRFYVINEHERSEAI 250 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ + P+++I+F TK +E+ L + ++ L GD+ Q+ R + F + D Sbjct: 251 MHLLDTQAPEKSIVFTRTKKEADELHQFLISKNYKSTALHGDMDQRDRRASIMAFKKNDA 310 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 D+LVATDVA+RGL I V+HVFNY LP + E Y+HRIGRTGRAG G +I+L Sbjct: 311 DVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKE 370 Query: 368 LPAIETYIGHSIPVSKYN 385 L ++ I I + + Sbjct: 371 LLRMQKEIDSEIELFEIP 388 >UniRef50_B1V958 DEAD/DEAH box helicase-like n=4 Tax=Candidatus Phytoplasma RepID=B1V958_PHYAS Length = 564 Score = 527 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 130/376 (34%), Positives = 213/376 (56%), Gaps = 10/376 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + + +AL++ F TPIQAL +P + G DV GQAQTGTGKT AF Sbjct: 5 FEQLPILEQTKKALQELNFIEATPIQALVIPEIIQGHDVIGQAQTGTGKTFAFGIPIIEK 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQLK 129 + D K+++ ++LI+ PTREL +Q++ + + L +++ + +GG+ Y KQ + Sbjct: 65 I-------DYKLSKTQSLILCPTRELTLQVYEELKKLLRYYPQIRIAVVFGGESYTKQFR 117 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LES ++I T GR+ID+ ++ I+L A++++ LDEAD M +GF + + + +++P Sbjct: 118 ALESKPHLIIATPGRVIDHIERGKIDLSALKILTLDEADEMLKMGFQEALETILKQIPE- 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSATL ++++A + N + ++V ++ + I++ F +K +LL Sbjct: 177 -ERQTVLFSATLPPSIKQIASKYQKNTKILQVPVKKLAVNAIEQYYFLVKEFDKNKLLVR 235 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L++ + I+FANTK +EI L G + GD+ Q +R +++ F +G + I Sbjct: 236 LLDLKRDYSTILFANTKKDVDEITSFLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKI 295 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVAARG+ I + V NYDLP + E YVHRIGRTGRAG G + S L Sbjct: 296 LIATDVAARGIDISDIKMVVNYDLPHEDEVYVHRIGRTGRAGKKGLAYSFISPRKFSQLK 355 Query: 370 AIETYIGHSIPVSKYN 385 +E Y+ + + Sbjct: 356 KLEYYLKEKVKFLEIP 371 >UniRef50_Q86XP3 ATP-dependent RNA helicase DDX42 n=64 Tax=Eukaryota RepID=DDX42_HUMAN Length = 938 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 128/420 (30%), Positives = 215/420 (51%), Gaps = 14/420 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+ F +++ + K + TPIQ +P+ L+GRD+ G A+TG+GKT AF+ Sbjct: 253 SSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPML 312 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 +++ + + P A+I+ PTREL QIHA+ + +A L+ YGG +Q Sbjct: 313 IHIMDQKEL--EPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA 370 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L+ G +I++ T GRLID+ K+ NL + +V DEADRM+D+GF +R + + P Sbjct: 371 KALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP 430 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEEL--FYPSNEEKMRL 246 R +LFSAT ++ +LA + + + + + + + + + + L Sbjct: 431 D--RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWL 488 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 + L+E ++F K EE+ +L +GH +GLL GD+ Q +R +++ +F + D Sbjct: 489 TRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKD 548 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + +LVATDVAARGL IP++ V NYD+ D + + HRIGRTGRAG G + +L + + Sbjct: 549 IPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSN 608 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRR-----TGAPRNRRRSG 421 + + +++ L+ + + R G + G R R G Sbjct: 609 FAGDLVRNLEG---ANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPG 665 >UniRef50_B0U160 DEAD-box subfamily ATP-dependent helicase n=18 Tax=Francisella RepID=B0U160_FRAP2 Length = 581 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 143/377 (37%), Positives = 220/377 (58%), Gaps = 8/377 (2%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 T++ FS L+ +++ + K G+ N TPIQ A+P L+GRDV GQAQTGTGKT AF Sbjct: 3 SETKKDFSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFA 62 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGDG 123 + + + + P+ L++APTRELA+Q+ + A+ L + YGG Sbjct: 63 LPLINNM-----DLESRDRAPQVLVLAPTRELAIQVAEQFQAFAKNIPNLDVACIYGGQE 117 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 Y Q++ L+ GV +++GTTGR++D+ ++ + L ++ +VLDEAD M +GFI D+R++ Sbjct: 118 YGSQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVRYVL 177 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 + QR +LFSAT+ + ++ E + N I+V+ + KT + + ++ K Sbjct: 178 SHVSDECQR--LLFSATIPTDIADIIQEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRK 235 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 + L L+E E D IIF TK E+ +L A G+RV + GD+ Q +R I+D+F Sbjct: 236 IDALDRLLEVEETDGVIIFVKTKTSTIEVADNLKALGYRVAAINGDMQQSQREYIVDQFR 295 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 D+LVATDV ARG+ + ++HV NYD+P+D + YVHRIGRTGRAG G SISL + Sbjct: 296 SAKSDVLVATDVVARGIDLERISHVINYDMPNDSDTYVHRIGRTGRAGREGISISLVPLK 355 Query: 364 YALNLPAIETYIGHSIP 380 L +E + G + Sbjct: 356 EMRFLRTLERFTGSPMQ 372 >UniRef50_B9SAJ6 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAJ6_RICCO Length = 956 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 125/349 (35%), Positives = 182/349 (52%), Gaps = 9/349 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F P+++ + GF TPIQA P+ L RD+ A+TG+GKT+ +L F Sbjct: 489 TFEASGFPPEILNDIRDAGFLAPTPIQAQTWPIALRNRDIVAIAKTGSGKTLGYLIPAFI 548 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + N P L++APTRELA QI + ++ + YGG QLK Sbjct: 549 LLRQ---CRNNPQNGPTVLVLAPTRELATQIQDEVIKFGRSSRVSCTCLYGGAPKGPQLK 605 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G DI++ T GRL D + I+ G + ++VLDEADRM D+GF IR + +PP Sbjct: 606 ELTRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPP- 664 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSNEEKMRLL 247 +R ++++AT VR++A + + N + + E I + + EK L Sbjct: 665 -RRQTLMYTATWPKEVRKIANDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKESRL 723 Query: 248 QTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 ++ + + IIF +TK C+++ + + GD +Q +R +L++F G Sbjct: 724 GQILRAQERGSKVIIFCSTKRLCDQLARSIGHQ-FGAAAIHGDKSQGERDWVLNQFRSGK 782 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGH 355 ILVATDVAARGL I + V NYD P EDYVHRIGRTGRAGA+G Sbjct: 783 SPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGV 831 >UniRef50_C0ZI64 Putative ATP-dependent RNA helicase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI64_BREBN Length = 493 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 138/372 (37%), Positives = 217/372 (58%), Gaps = 9/372 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 + F+ F P++++ ++ + T IQ A+PL + G+D+ GQAQTGTGKT AF+ Sbjct: 3 KSFASFGFRPELMQGIQDLYYKEPTQIQEEAIPLIMEGKDLIGQAQTGTGKTAAFMLPIL 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + L D +ALI+ PTREL++QI + E L + + + +GG DKQL Sbjct: 63 NAL-------DEGKRDIQALILTPTRELSIQIAKEVEKLGKHLNVNVLSLHGGTDIDKQL 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L+ V I++GT GR++D+ K+ ++ G I +VLDEAD+M ++GF++D+ + P Sbjct: 116 SKLKETVQIVVGTPGRVLDHMKRGSLHFGRISTLVLDEADKMMEMGFLEDVEQVIVHTP- 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +QR +LFSAT+ V++LA M +I++E +QKT RI++ + + +K L Sbjct: 175 -SQRQVLLFSATMPDLVKKLAHRFMKQPPHIKIEGKQKTVERIEQFYYVVNQSDKTDALV 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E+E P I+FANT+ R +++ L +G L GD++Q KR +++ +F Sbjct: 234 DVLEQEQPFLTIVFANTQVRVQQLTARLQENGLSAKALYGDLSQNKREQLMKQFREIRFQ 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 L+ATD+AARGL + VTHV NYDLP+D + Y+HR+GRTGRAG G +ISL + Sbjct: 294 FLIATDIAARGLDVEGVTHVINYDLPNDVDSYIHRVGRTGRAGQKGKAISLISPRQKNLM 353 Query: 369 PAIETYIGHSIP 380 SI Sbjct: 354 ARFAKATKASIE 365 >UniRef50_C1D891 Putative ATP-dependent RNA helicase protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D891_LARHH Length = 520 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 146/426 (34%), Positives = 229/426 (53%), Gaps = 15/426 (3%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + F+ L ++V ALE+ TP+QA ALPL L+GRD+ AQTGTGKT AFL Sbjct: 1 MQTNAFAALGLDARLVHALEQHNITTPTPVQAEALPLLLSGRDLMASAQTGTGKTAAFLL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGY 124 LL P + PR L++APTREL Q+ A+ + + + + GG + Sbjct: 61 PALSRLLVEPVA---RSRGPRILVLAPTRELVQQVAKAAQEFSTKIPRVNVASVIGGTSF 117 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q ++L +++++ T GRL+D + I+ ++++VLDEADRM D+GF +D+ + Sbjct: 118 RTQNQMLTRPIEVMVATPGRLMDQMRSGRIDFSRLEMLVLDEADRMLDMGFSEDVMEIAS 177 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEK 243 ++P A R F+AT++ RV + A E + IE+ + I+++ + + + K Sbjct: 178 QLPKA--RQTAFFTATMTRRVLDFADELLTEPAKIEIAAQTAKHENIEQQAIFVDDIDHK 235 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 RL++ ++ + +AI+F TK C+ + L DG R L GD+ Q+ R R L Sbjct: 236 RRLVRHILSQPDVKQAIVFVATKRDCDTLADELIVDGIRADALHGDMQQRDRTRTLTRLR 295 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G ++LVATDVAARG+ + ++HV N+DLP EDYVHR+GRTGRAGA+G ++SL + Sbjct: 296 SGQTEVLVATDVAARGIDVAGISHVINFDLPRFAEDYVHRVGRTGRAGATGTAVSLVGRQ 355 Query: 364 YALNLPAIETYIGHSIPVSKYNP--------DALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 A L IE + G + V++ + + +PR GNG R+ R Sbjct: 356 DAFPLKKIERFTGQKLIVTEIEGMIARFKPQERREGGGGRGGFGGKPRHGNGQGRSYGDR 415 Query: 416 NRRRSG 421 + G Sbjct: 416 SSAPRG 421 >UniRef50_D0WN23 ATP-dependent RNA helicase DeaD n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WN23_9ACTO Length = 767 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 141/410 (34%), Positives = 216/410 (52%), Gaps = 19/410 (4%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L ++ A+++ GF T IQA A+P+ L GRDV G AQTGTGKT AF + Sbjct: 129 FDDLGLPEDLLSAVKELGFSAPTAIQAAAIPILLRGRDVVGVAQTGTGKTAAFALPLLAH 188 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQLK 129 + D + + +AL++APTRELA+Q E A ++ G+ + YGG Y QLK Sbjct: 189 I-------DPEKREVQALVLAPTRELAMQGAQAIESFAAKSRGVDVAAVYGGSSYLPQLK 241 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE G +++GT GR++D + + L A++ VLDEAD M +GF +D+ + +P Sbjct: 242 ALEGGAQVVVGTPGRIMDLMDRGALRLDAVRYFVLDEADEMLRMGFAEDVEKIASEVPEG 301 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 R++ LFSAT+ +R +A +++AE + + T +K+ K+ L Sbjct: 302 --RISALFSATMPPPIRRVAERHLSDAEEVTISRPATTVSTVKQMYAVVPERHKIGALAR 359 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++ A++F T+ E++ L A G L+GDV QK+R +++ G LD+ Sbjct: 360 VLAVTEAQAALVFVRTRSTAEDLTIELGARGVATAALSGDVVQKEREKLVARLRDGTLDV 419 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL + + V N+D+P + + YVHRIGRTGRAG +G SI+ + L Sbjct: 420 LVATDVAARGLDVDRIGLVVNFDVPRETDTYVHRIGRTGRAGRTGESITFVTPKERPRLR 479 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 IE G + +LP P +++ R + A + R Sbjct: 480 RIEKQTGSRME---------QIELPTPAEVSKLRARRTVEQAMARVAKGR 520 >UniRef50_Q9GV13 Vasa-related protein CnVAS1 n=6 Tax=Eumetazoa RepID=Q9GV13_HYDMA Length = 797 Score = 526 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 136/409 (33%), Positives = 213/409 (52%), Gaps = 7/409 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 ++F++ + ++E +EK + TP+Q A+P+ RD+ AQTG+GKT AFL Sbjct: 353 REFAEANIDRTILENVEKAHYIKPTPVQKYAIPIITGNRDLMSCAQTGSGKTAAFLIPVL 412 Query: 69 HYLLSHPA---IADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + L+ + + +V P AL++APTRELAVQI +A A+ T +K + YGG Sbjct: 413 NTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQIQKEARKFAQNTSIKPVVIYGGVQVA 472 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 L+ ++ +L+GT GRL D+ + I+L ++ ++LDEADRM D+GF+ +I+ + Sbjct: 473 YHLRQVQQDCHLLVGTPGRLKDFLGKRKISLANLKYLILDEADRMLDMGFLPEIKAIIND 532 Query: 186 --MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 MPP R ++FSAT ++ LA E +NN Y+ + T I + + K Sbjct: 533 FDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTIGKVGGTHSDITQCIMEVEESAK 592 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 L +++ E +R ++F TK + + +L +G + GD Q++R L EF Sbjct: 593 RDKLIEILDTEGTNRNLVFVQTKRLADFLASYLCQNGFHTTSIHGDRLQQQREEALAEFK 652 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE- 362 G +L+AT VAARGL I V V NYDLPD+ E+Y+HRIGRTGR G G +IS Sbjct: 653 AGTQHVLIATAVAARGLDIADVKQVINYDLPDEIEEYIHRIGRTGRIGNKGKAISFFTRG 712 Query: 363 -EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRR 410 + L ++T V + +A + L R + R Sbjct: 713 KDEGLARALVKTLADAEQEVPSWLEEAAESALGTGYGPKGGRFASKDSR 761 >UniRef50_Q15T34 DEAD/DEAH box helicase-like n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15T34_PSEA6 Length = 458 Score = 526 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 137/408 (33%), Positives = 205/408 (50%), Gaps = 5/408 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L +++ A+ +G+ T IQ A+PL LA D+ AQTGTGKT AF Sbjct: 1 MSFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + + KV R+LI+ PTRELA Q+ E + ++ YGG + Q+ Sbjct: 61 QRLAAKQST---KVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQI 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L+ GVD+LI T GRL+D +Q ++ ++++V DEADRM DLGFI D++ + +P Sbjct: 118 AQLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPV 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSAT S +++ A E +N + IEV T + + K L Sbjct: 178 --KRQTLLFSATFSKQIKHFAREMLNAPKTIEVSAVNSTVDLVAQTFHPIEQARKSAALI 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI++ + ++F TK + + L G + + Q R + L+ F G++ Sbjct: 236 QLIQQHRWSQTLVFIRTKRTADALVTELEDAGIAAASIHANRTQHARTQALNAFKAGEIQ 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ + + V NYDLP EDYVHRIGRTGRAG +G +ISL + L Sbjct: 296 VLVATDIAARGIDVSQLPCVVNYDLPYVPEDYVHRIGRTGRAGNTGTAISLFSPDEISQL 355 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 ++E Y+ + S A + K + T RN Sbjct: 356 QSLERYLDQHLKPSTLVGFAPKDQVTKSWSANKANTRVNSAEKPTSRN 403 >UniRef50_A0KXT6 DEAD/DEAH box helicase domain protein n=61 Tax=Gammaproteobacteria RepID=A0KXT6_SHESA Length = 491 Score = 526 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 154/404 (38%), Positives = 219/404 (54%), Gaps = 5/404 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS LH +V+A+ + G+ TPIQ A+P LAG++V AQTGTGKT +F+ H Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 P I + + RA+I+ PTRELA+Q+ + A+ L YGG Q K Sbjct: 63 FADAPKI---RPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKR 119 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+L+ T GRL+D Q I + V+VLDEADRM D+GFI+DI + ++P Sbjct: 120 LIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPE-- 177 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 QR N+LFSATLS +V+ LA + +A IE+ + I + L ++K LL L Sbjct: 178 QRQNLLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDKKSALLSHL 237 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I+E+ +A+IF TKH ++ L G +Q R ++L +F G + L Sbjct: 238 IQEQNWSQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQLLIDFKAGKVSFL 297 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VAT VA+RG+ I A+ V NYDLPD+ +DY+HRIGRTGRAG G +IS ++ NL A Sbjct: 298 VATGVASRGIDIDALARVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCA 357 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 IE +GH I + +P + P++ + R Sbjct: 358 IERRLGHVIVRREIAGFEPKKVVPISILDFVPKSASKTERKPNS 401 >UniRef50_B1CAG5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAG5_9FIRM Length = 510 Score = 526 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 127/382 (33%), Positives = 200/382 (52%), Gaps = 10/382 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + FS+ ++ + L++ GF N T IQ A+P +G DV G++QTGTGKT+AF Sbjct: 1 MNKTTFSELEINLDINRVLDEMGFTNPTDIQNKAIPAIRSGVDVIGKSQTGTGKTIAFAI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGY 124 + +++ + LI+ PTRELA Q +A+ + L + +K+ YGG Sbjct: 61 PAIEKI-----DIEQEKPTAQVLIICPTRELAQQGYAEIKKLTKYMPEIKVVDIYGGVSM 115 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 ++Q+ L+ I+IGT GR+ D+ K+ + L I++VVLDEAD M +GF +DI + + Sbjct: 116 ERQISKLKK-AHIVIGTPGRIKDHLKRRTLKLQNIKMVVLDEADEMLSMGFKEDIDTILK 174 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 P R +LFSAT+ + + + N I+++ EQ T ++I + +K Sbjct: 175 TAPDT--RQTVLFSATMPPAIMNIIDTFLKNPLLIQIDKEQVTVNKIAQNYIDVPKGKKK 232 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 +L L+ IIF NTK +++ L +G L GD+ Q +R R++ F Sbjct: 233 EVLNLLLHYYGSKLTIIFCNTKRMVDDLTKFLRKNGFSAECLHGDIRQNERSRVMSNFKN 292 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA-CEE 363 ILVATDVAARG+ + V +V NYD+P + E Y+HRIGRT R G +G SI++ + Sbjct: 293 AKTPILVATDVAARGIDVKDVEYVINYDIPQNSEYYIHRIGRTARGGKTGTSITMTNNRK 352 Query: 364 YALNLPAIETYIGHSIPVSKYN 385 +L I I Sbjct: 353 QVTDLKMILKETNSKIKKLDIP 374 >UniRef50_Q9NQI0 Probable ATP-dependent RNA helicase DDX4 n=53 Tax=Coelomata RepID=DDX4_HUMAN Length = 724 Score = 526 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 125/366 (34%), Positives = 192/366 (52%), Gaps = 5/366 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + L + + K G+ TP+Q ++P+ LAGRD+ AQTG+GKT AFL Sbjct: 289 TFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILA 348 Query: 70 YLLSHPAIADR--KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 +++ A R ++ +P +I+APTREL QI+ +A + T ++ + YGG Sbjct: 349 HMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHS 408 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR-- 185 ++ + G +IL T GRL+D + I L I+ +VLDEADRM D+GF +++ L Sbjct: 409 IRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPG 468 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 MP QR ++FSAT ++ LA E + N ++ V +++ + K Sbjct: 469 MPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKR 528 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L ++ +R ++F TK + + I L + + GD Q++R + L +F Sbjct: 529 EKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRF 588 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G +LVAT VAARGL I V HV N+DLP ++YVHRIGRTGR G +G +IS E Sbjct: 589 GKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLES 648 Query: 365 ALNLPA 370 +L Sbjct: 649 DNHLAQ 654 >UniRef50_C0QD57 RecQ2 n=3 Tax=Desulfobacterales RepID=C0QD57_DESAH Length = 537 Score = 525 bits (1355), Expect = e-148, Method: Composition-based stats. Identities = 167/408 (40%), Positives = 241/408 (59%), Gaps = 2/408 (0%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T + +F D L ++ A+ + F C P+QA LP TL G+D +AQTGTGK+ AF Sbjct: 91 TQEGKTRFHDLDLPLGLMHAISDENFQYCMPVQAEVLPHTLMGKDATAKAQTGTGKSAAF 150 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 L + L+ +P R+ PRALI+ PTREL +QI DA+ L T L+ +GG Sbjct: 151 LVTIIARLMKNPTRGKREKGTPRALIIEPTRELVLQIEKDAKALTLYTPLRTVSVFGGMD 210 Query: 124 YDKQLKVLES-GVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y +Q L S VDI+ T GRL+D+ +Q INLG I+++V+DEADR+ D+GFI D+R + Sbjct: 211 YKRQQDQLASAHVDIIAATPGRLMDFMRQKLINLGKIEILVIDEADRLLDMGFIPDMRNI 270 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 P +R + FSATL+ + +A + + +E++P++ I +++F + ++ Sbjct: 271 IYNTPHKKERQTLFFSATLAPEILRMANQWTVDPAVVEIDPDKTAADSINQKVFIVTEDQ 330 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K LL LI E +R I+F N + I L +L+G+V+QK+R+R LD+F Sbjct: 331 KFPLLYNLISGEKLERVILFVNMRSTTRRIAQRLVQFDISSEILSGEVSQKQRIRTLDDF 390 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G + +LVATDVAARGLHI V+HV NYDLP D E Y+HRIGRTGRAGA G S+S A E Sbjct: 391 RNGKVRVLVATDVAARGLHIEGVSHVINYDLPQDPEHYIHRIGRTGRAGAEGISVSFADE 450 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRR 410 + +P IE +G+ + Y DA++ LPKP R P+ P + Sbjct: 451 MSSFQIPDIEAVLGNKLECE-YPDDAMLAPLPKPKRRIPPKPDTRPPQ 497 >UniRef50_C0AEG7 DEAD/DEAH box helicase domain protein (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEG7_9BACT Length = 606 Score = 525 bits (1355), Expect = e-148, Method: Composition-based stats. Identities = 133/400 (33%), Positives = 220/400 (55%), Gaps = 10/400 (2%) Query: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYL 71 ++ L P++++A++K GF +PIQA +PL LAG DV GQ+ TG+GKT AF + Sbjct: 1 AELGLSPELLKAVDKMGFEEASPIQAAVIPLLLAGSDVVGQSSTGSGKTAAFALPAIERV 60 Query: 72 LSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLKV 130 D K+ + LI+ PTRELAVQ+ + LA G+ YGG Y++Q + Sbjct: 61 -------DTKLKAVQVLILCPTRELAVQVAEEVNKLASFKRGVMEVPIYGGQSYERQFRA 113 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L +G ++IGT GR++D+ ++ + L + +V+LDE DRM D+GF DI + + +P Sbjct: 114 LAAGAQVVIGTPGRVMDHMERGTLKLDKLSMVILDECDRMLDMGFRDDIEHILKSVPE-- 171 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 QR ++ FSAT+ +R++ + N ++++E + ++ ++ + F K+ +L L Sbjct: 172 QRQSLFFSATMPREIRDMISRFIPNPAWVKIETQMQSAPQVDQVYFEVDRRSKLEVLTRL 231 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I+ IIF +TK +E+ +L A G+ L GD+ Q +R R +++F R + L Sbjct: 232 IDLNDFRYGIIFCSTKIMVDELDENLHARGYACDRLHGDITQAQRTRTMEKFKRRGFEFL 291 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 +ATDVAARGL + + VFN+DLP+D EDY HRIGRTGRAG G + + L + Sbjct: 292 IATDVAARGLDVDDLEVVFNFDLPNDAEDYTHRIGRTGRAGRKGKAFTFVSGRELWKLQS 351 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRR 410 + + I + + + + + + R ++ Sbjct: 352 MVRFARLDIRRERVPSLDQVEEARENVFFEKLRATLDAKK 391 >UniRef50_A6LUG3 DEAD/DEAH box helicase domain protein n=33 Tax=Firmicutes RepID=A6LUG3_CLOB8 Length = 480 Score = 525 bits (1355), Expect = e-148, Method: Composition-based stats. Identities = 135/407 (33%), Positives = 223/407 (54%), Gaps = 10/407 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 +F+ F + ++++++E G+ N + +Q +P L +D+ ++QTG+GKT AF Sbjct: 2 NNEFTKFKISDEILKSIEGLGYKNPSKVQEKVIPEILLNKDIIVKSQTGSGKTAAFGIPL 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + D N P+ L++ PTRELAVQ+ D + +K +G + +Q Sbjct: 62 CEKV-------DWNENIPQILVLTPTRELAVQVSEDITNIGRFKRIKSVSIFGKEPISEQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L+ +++GT GR++D+ + +NL I+ V+DEAD M ++GFI + + RR+P Sbjct: 115 ERKLKQKTHVVVGTPGRILDHIDRGSLNLAQIKYFVIDEADEMLNMGFIGQVEGIIRRLP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +++ MLFSAT+ ++ L + MN I + ++ I L+Y + EEK+ L Sbjct: 175 --KKKVTMLFSATIPEEIKVLCDKYMNKPVDISINNQKLINENIDHNLYYTNYEEKIEKL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 ++ E P+ +IFA TK + ++ L + G+ V + G + QK+RL I+D F GD Sbjct: 233 NDILITEKPETVVIFAKTKENVDTVFQWLKSKGYSVNRIHGGMLQKERLSIMDGFRLGDF 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILV+TD+A+RG+ + +THV NYDLP + E YVHRIGRTGRAG G +IS E Sbjct: 293 RILVSTDLASRGIDVKGITHVINYDLPVEKEAYVHRIGRTGRAGEKGKAISFCVNEKDKL 352 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 L IE +IG IPV P+ +M + K + ++ + + Sbjct: 353 LSEIEEFIGFKIPVYNL-PEKIMVEKEKSEGIKTLKSKPKRKEEKSK 398 >UniRef50_P09052 ATP-dependent RNA helicase vasa n=39 Tax=Eumetazoa RepID=VASA_DROME Length = 661 Score = 525 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 127/383 (33%), Positives = 203/383 (53%), Gaps = 7/383 (1%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 S Q F+ L +++ + K G+ TPIQ ++P+ +GRD+ AQTG+GKT Sbjct: 238 SDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTA 297 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AFL LL P + ++ +P+ +I++PTRELA+QI +A A + LK+G+ YGG Sbjct: 298 AFLLPILSKLLEDP--HELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGG 355 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 + Q + + G ++I T GRL+D+ + I + VVLDEADRM D+GF +D+R Sbjct: 356 TSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRR 415 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + + ++FSAT ++ +A E + N ++ + +K+ ++ + Sbjct: 416 IMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKY 475 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K L ++ E D I+F TK + + L+ + GD Q +R + L + Sbjct: 476 AKRSKLIEIL-SEQADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRD 534 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +L+AT VA+RGL I + HV NYD+P +DYVHRIGRTGR G +G + S Sbjct: 535 FKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFD 594 Query: 362 EEY----ALNLPAIETYIGHSIP 380 E A +L I G ++P Sbjct: 595 PEKDRAIAADLVKILEGSGQTVP 617 >UniRef50_A4BET4 DEAD/DEAH box helicase-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BET4_9GAMM Length = 579 Score = 524 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 131/371 (35%), Positives = 203/371 (54%), Gaps = 10/371 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F+D L P +++ L+ G+ TPIQ+ A+ L G DV G AQTGTGKT AF Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQL 128 + D N+P+AL++ PTRELA+Q+ + A + YGG QL Sbjct: 66 RI-------DTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQL 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ +++GT GR++D+ ++ ++L ++ +VLDEAD M +GFI+DI W+ P Sbjct: 119 RALKQNPQVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPK 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 LFSAT+ ++++ + + + IE++ +I++ ++ +K+ L Sbjct: 179 DK--QTALFSATMPHQIKRITDQYQKDPVKIEIKASHSELQQIEQLVWRARGLDKLDGLT 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E E + IIF T+ C+ + LAA G+ L+G+VAQK+R IL +G LD Sbjct: 237 RILEIEDWNAIIIFVRTRVECQFLSEKLAARGYAATALSGEVAQKQREDILSAMKKGKLD 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 I++ATDVAARG+ I +THV N+D+P D Y HRIGRTGRAG SG +I + Sbjct: 297 IIIATDVAARGIDIERITHVINWDIPGDVSTYTHRIGRTGRAGRSGKAILFCKPREQRII 356 Query: 369 PAIETYIGHSI 379 IE + Sbjct: 357 RDIERATKSEL 367 >UniRef50_A9A5S3 DEAD/DEAH box helicase domain protein n=5 Tax=Thaumarchaeota RepID=A9A5S3_NITMS Length = 440 Score = 524 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 145/406 (35%), Positives = 217/406 (53%), Gaps = 15/406 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF + L +++ L GF PIQ +P+ L GRDV GQA TG+GKT AF S Sbjct: 2 TKFQELGLKEDILKGLNDLGFEEAFPIQEAVIPVLLTGRDVVGQAHTGSGKTAAFSLSML 61 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + N + LIMAPTRELA+QI + + + TG+K+ YGG G QL Sbjct: 62 QEI--------QPKNGIQGLIMAPTRELAMQITDEIKKFGKYTGIKVATVYGGQGMGLQL 113 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 LE GV+I++ T GRLID+ K+ I L + +VLDEAD M D+GFI DI ++ P Sbjct: 114 DALERGVEIVVATPGRLIDHLKRGSIELRDVTHIVLDEADTMLDMGFIDDIGFILDLAPE 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R+ LFSAT+ + L+ E +NN + ++ + +G I + + +K + L Sbjct: 174 D--RVMSLFSATMPTEILRLSEEYLNNPKQFLLDADDLSGEGIDQSYLVIKDRDKFKYLI 231 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 I+ +AI+F +TK+R ++ L + + GD++Q +R + + +F G D Sbjct: 232 DFIKPTK-GQAIVFCSTKYRTRDVAKFLHQEKFDAVAIEGDMSQHRREQSMGKFRSGKAD 290 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVA+RG+ +P V V NYD+P+ Y HRIGRT RAGA G +++ + Sbjct: 291 ILVATDVASRGIDVPRVELVINYDVPNQEMAYFHRIGRTARAGAKGKAVTFVSYSSVGDW 350 Query: 369 PAIETYIGHSIPVSKYNPD-ALMTDLPKPLRLTRP-RTGNGPRRTG 412 I+ I +P+ N + + +P PL+ P R G R+ Sbjct: 351 NLIKRQI--KVPIKDLNEEMGIEIAIPDPLKRQMPSRRYGGQSRSN 394 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B3RIS6 Putative uncharacterized protein n=1 Tax=Trichop... 615 e-175 UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 614 e-174 UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttle... 611 e-173 UniRef50_P24783 ATP-dependent RNA helicase DBP2 n=131 Tax=Eukary... 609 e-173 UniRef50_P24782 ATP-dependent RNA helicase dbp2 n=63 Tax=Eukaryo... 609 e-173 UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus... 609 e-173 UniRef50_Q8MZI3 CG10077, isoform A n=15 Tax=Eukaryota RepID=Q8MZ... 605 e-171 UniRef50_P17844 Probable ATP-dependent RNA helicase DDX5 n=52 Ta... 602 e-171 UniRef50_Q92841 Probable ATP-dependent RNA helicase DDX17 n=25 T... 600 e-170 UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 599 e-170 UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 598 e-169 UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 597 e-169 UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Fi... 597 e-169 UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Ni... 596 e-169 UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B... 594 e-168 UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=... 594 e-168 UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=O... 594 e-168 UniRef50_Q1ECV0 LOC556764 protein (Fragment) n=21 Tax=Eukaryota ... 593 e-168 UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=c... 593 e-168 UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteo... 592 e-168 UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Ta... 592 e-168 UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root R... 591 e-167 UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria Rep... 591 e-167 UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryo... 591 e-167 UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=c... 590 e-167 UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=B... 590 e-167 UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptos... 590 e-167 UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Ni... 589 e-167 UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Ta... 588 e-166 UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 587 e-166 UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Ta... 587 e-166 UniRef50_C4Q0V4 DEAD box ATP-dependent RNA helicase, putative n=... 586 e-166 UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria R... 586 e-166 UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 586 e-166 UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomona... 586 e-166 UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hy... 585 e-165 UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=... 584 e-165 UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=C... 584 e-165 UniRef50_O00571 ATP-dependent RNA helicase DDX3X n=262 Tax=cellu... 583 e-165 UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 T... 583 e-165 UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 582 e-165 UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular org... 582 e-165 UniRef50_C4Q2M5 DEAD box ATP-dependent RNA helicase, putative n=... 581 e-164 UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Cl... 581 e-164 UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Cl... 581 e-164 UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID... 580 e-164 UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family... 580 e-164 UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dy... 580 e-164 UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 580 e-164 UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax... 580 e-164 UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Eu... 580 e-164 UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=A... 579 e-164 UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria Rep... 579 e-164 UniRef50_P24346 Putative ATP-dependent RNA helicase an3 n=63 Tax... 579 e-164 UniRef50_C4QFR3 DEAD box ATP-dependent RNA helicase, putative n=... 578 e-163 UniRef50_Q5CQW8 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+H... 577 e-163 UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimo... 577 e-163 UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=... 577 e-163 UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=B... 577 e-163 UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=... 576 e-163 UniRef50_B7PA03 ATP-dependent helicase (DEAD box), putative n=1 ... 576 e-163 UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA 576 e-163 UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 575 e-163 UniRef50_Q1AG34 Ded1-like DEAD-box RNA helicase n=3 Tax=Coelomat... 575 e-162 UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clos... 575 e-162 UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bact... 575 e-162 UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein... 575 e-162 UniRef50_P19109 ATP-dependent RNA helicase p62 n=11 Tax=Eukaryot... 574 e-162 UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Cl... 574 e-162 UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, s... 574 e-162 UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cell... 573 e-162 UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=A... 573 e-162 UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Te... 573 e-162 UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 Rep... 573 e-162 UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae Rep... 572 e-162 UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 T... 572 e-162 UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2... 572 e-162 UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms R... 572 e-162 UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteoba... 572 e-162 UniRef50_Q9VHP0 ATP-dependent RNA helicase bel n=13 Tax=Eukaryot... 572 e-161 UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=As... 571 e-161 UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Sp... 571 e-161 UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=... 570 e-161 UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Ko... 569 e-161 UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform ... 569 e-161 UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Br... 569 e-161 UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 ... 569 e-161 UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria... 569 e-161 UniRef50_Q17KA8 DEAD box ATP-dependent RNA helicase n=4 Tax=Euka... 569 e-161 UniRef50_UPI00006CD03A P68-like protein, putative n=1 Tax=Tetrah... 569 e-161 UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Ne... 569 e-161 UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Al... 568 e-160 UniRef50_B3L9V8 Helicase, putative n=6 Tax=Alveolata RepID=B3L9V... 568 e-160 UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Nept... 567 e-160 UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabd... 567 e-160 UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zy... 567 e-160 UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 ... 567 e-160 UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Ak... 567 e-160 UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepI... 566 e-160 UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdema... 566 e-160 UniRef50_B1KQF6 ATP-dependent RNA helicase rhlB n=10 Tax=Proteob... 565 e-160 UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma ... 565 e-160 UniRef50_Q88NB7 ATP-dependent RNA helicase rhlB n=50 Tax=Gammapr... 565 e-159 UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms Rep... 565 e-159 UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 564 e-159 UniRef50_A8REA9 Putative uncharacterized protein n=1 Tax=Eubacte... 564 e-159 UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepI... 564 e-159 UniRef50_B7EQA6 cDNA clone:J023079L21, full insert sequence n=5 ... 564 e-159 UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA 564 e-159 UniRef50_D1INE6 Whole genome shotgun sequence of line PN40024, s... 564 e-159 UniRef50_UPI000186EE68 DEAD box ATP-dependent RNA helicase, puta... 563 e-159 UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 563 e-159 UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Ba... 563 e-159 UniRef50_D1IXE3 Whole genome shotgun sequence of line PN40024, s... 563 e-159 UniRef50_A2EVI2 DEAD/DEAH box helicase family protein n=1 Tax=Tr... 563 e-159 UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular orga... 563 e-159 UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gru... 563 e-159 UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=De... 563 e-159 UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Ch... 562 e-159 UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteri... 562 e-159 UniRef50_D0MZ17 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 562 e-159 UniRef50_Q86XP3 ATP-dependent RNA helicase DDX42 n=64 Tax=Eukary... 562 e-158 UniRef50_B3M5L4 GF23818 n=1 Tax=Drosophila ananassae RepID=B3M5L... 561 e-158 UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulv... 561 e-158 UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 561 e-158 UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Pr... 560 e-158 UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcu... 560 e-158 UniRef50_Q0D1K3 Pre-mRNA-processing ATP-dependent RNA helicase p... 560 e-158 UniRef50_Q4TVV3 Probable ATP-dependent RNA helicase DDX46 n=18 T... 560 e-158 UniRef50_C4V8Q7 Putative uncharacterized protein n=1 Tax=Nosema ... 560 e-158 UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fe... 560 e-158 UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax... 559 e-158 UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME 559 e-158 UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pn... 559 e-158 UniRef50_Q9GNP1 Vasa homolog n=25 Tax=Eumetazoa RepID=Q9GNP1_CIOSA 559 e-158 UniRef50_Q54QS3 Probable ATP-dependent RNA helicase ddx3 n=3 Tax... 559 e-158 UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box ... 559 e-158 UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ... 559 e-158 UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Berm... 559 e-158 UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eg... 559 e-158 UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desu... 559 e-157 UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family... 559 e-157 UniRef50_Q8SRB2 ATP-dependent RNA helicase DBP2 n=18 Tax=Fungi/M... 559 e-157 UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hy... 558 e-157 UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT... 558 e-157 UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria... 558 e-157 UniRef50_A1SAL1 ATP-dependent RNA helicase rhlB n=142 Tax=Gammap... 558 e-157 UniRef50_B4MZE1 GK18312 n=1 Tax=Drosophila willistoni RepID=B4MZ... 558 e-157 UniRef50_C4LZM8 DEAD/DEAH box helicase, putative n=4 Tax=Entamoe... 557 e-157 UniRef50_A6V0P4 ATP-dependent RNA helicase RhlB n=15 Tax=Pseudom... 557 e-157 UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured me... 557 e-157 UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptob... 557 e-157 UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=A... 557 e-157 UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospi... 557 e-157 UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteob... 557 e-157 UniRef50_B7QFN5 ATP-dependent RNA helicase, putative n=1 Tax=Ixo... 557 e-157 UniRef50_Q9VXW2 CG6227 n=20 Tax=Endopterygota RepID=Q9VXW2_DROME 557 e-157 UniRef50_B8A609 Novel protein similar to vertebrate DEAD (Asp-Gl... 557 e-157 UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax... 557 e-157 UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Ba... 556 e-157 UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=De... 556 e-157 UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=be... 556 e-157 UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=P... 555 e-157 UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=B... 555 e-157 UniRef50_B6K0K2 ATP-dependent RNA helicase Prp11 n=1 Tax=Schizos... 555 e-156 UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A... 555 e-156 UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (Dea... 555 e-156 UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=An... 554 e-156 UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organism... 554 e-156 UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria R... 554 e-156 UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3... 554 e-156 UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pi... 554 e-156 UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicu... 554 e-156 UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Al... 553 e-156 UniRef50_A8P4I3 ATP-dependent RNA helicase An3, putative n=2 Tax... 553 e-156 UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1... 553 e-156 UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fi... 553 e-156 UniRef50_C5KR89 RNA helicase, putative n=3 Tax=Perkinsus marinus... 553 e-156 UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus Re... 553 e-156 UniRef50_B6YWR7 DEAD/DEAH box RNA helicase n=3 Tax=Thermococcus ... 552 e-156 UniRef50_B9SAJ6 Dead box ATP-dependent RNA helicase, putative n=... 552 e-156 UniRef50_Q9NQI0 Probable ATP-dependent RNA helicase DDX4 n=53 Ta... 552 e-155 UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae... 552 e-155 UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SER... 552 e-155 UniRef50_D2VEC4 DEAD/DEAH box helicase n=1 Tax=Naegleria gruberi... 552 e-155 UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=R... 551 e-155 UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=De... 551 e-155 UniRef50_A5EYB1 ATP-dependent rna helicase Rhl n=1 Tax=Dicheloba... 551 e-155 UniRef50_B4N414 GK13754 n=2 Tax=Bilateria RepID=B4N414_DROWI 551 e-155 UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=De... 551 e-155 UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular or... 551 e-155 UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmat... 551 e-155 UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=A... 551 e-155 UniRef50_P93008 DEAD-box ATP-dependent RNA helicase 21 n=12 Tax=... 551 e-155 UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24... 550 e-155 UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase prote... 550 e-155 UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Proc... 550 e-155 UniRef50_C9DQK7 VASA DEAD-box protein n=5 Tax=Chordata RepID=C9D... 550 e-155 UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=B... 550 e-155 UniRef50_Q9NXZ2 Probable ATP-dependent RNA helicase DDX43 n=23 T... 550 e-155 UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales Re... 550 e-155 UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 549 e-155 UniRef50_Q388E8 ATP-dependent DEAD/H RNA helicase, putative n=4 ... 549 e-155 UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 ... 549 e-155 UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gam... 549 e-155 UniRef50_Q4UPY5 ATP-dependent RNA helicase rhlB n=186 Tax=Gammap... 549 e-154 UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacte... 549 e-154 UniRef50_UPI00015B57D6 PREDICTED: similar to DEAD box ATP-depend... 549 e-154 UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lent... 548 e-154 UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bac... 548 e-154 UniRef50_Q9P7C7 Pre-mRNA-processing ATP-dependent RNA helicase p... 548 e-154 UniRef50_B9ETM9 Putative uncharacterized protein n=2 Tax=Oryza s... 547 e-154 UniRef50_B7S475 Predicted protein n=2 Tax=Bacillariophyta RepID=... 547 e-154 UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Cl... 547 e-154 UniRef50_C4QME8 DEAD box ATP-dependent RNA helicase, putative n=... 547 e-154 UniRef50_Q9GV13 Vasa-related protein CnVAS1 n=6 Tax=Eumetazoa Re... 547 e-154 UniRef50_P09052 ATP-dependent RNA helicase vasa n=39 Tax=Eumetaz... 547 e-154 UniRef50_UPI000192615D PREDICTED: similar to DEAD (Asp-Glu-Ala-A... 547 e-154 UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alp... 547 e-154 UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=F... 547 e-154 UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. N... 547 e-154 UniRef50_Q8D2Y1 DeaD protein n=2 Tax=Enterobacteriaceae RepID=Q8... 546 e-154 UniRef50_UPI00019259AA PREDICTED: similar to DEAD (Asp-Glu-Ala-A... 546 e-154 UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostri... 546 e-154 UniRef50_A6RW79 Pre-mRNA-processing ATP-dependent RNA helicase p... 546 e-154 UniRef50_C5KE40 ATP-dependent RNA helicase ded-1, putative n=6 T... 546 e-154 UniRef50_A0LLL9 DEAD/DEAH box helicase domain protein n=2 Tax=De... 546 e-154 UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospi... 546 e-154 UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Pr... 546 e-154 UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, s... 546 e-154 UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria Rep... 545 e-154 UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Ve... 545 e-153 UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatim... 545 e-153 UniRef50_Q10MH8 DEAD-box ATP-dependent RNA helicase 24 n=10 Tax=... 545 e-153 UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteri... 545 e-153 UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicas... 544 e-153 UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=... 544 e-153 UniRef50_C0AEG7 DEAD/DEAH box helicase domain protein (Fragment)... 544 e-153 UniRef50_UPI000186EE69 DEAD box ATP-dependent RNA helicase, puta... 544 e-153 UniRef50_Q8H0U8 DEAD-box ATP-dependent RNA helicase 42 n=11 Tax=... 544 e-153 UniRef50_A9NFC3 DEAD box ATP-dependent RNA helicase n=1 Tax=Acho... 544 e-153 UniRef50_Q8I0W7 Snrnp protein, putative n=32 Tax=Eukaryota RepID... 544 e-153 UniRef50_Q9BUQ8 Probable ATP-dependent RNA helicase DDX23 n=74 T... 543 e-153 UniRef50_Q553B1 ATP-dependent RNA helicase ddx46 n=1 Tax=Dictyos... 543 e-153 UniRef50_B6K911 DEAD/DEAH box helicase, putative n=3 Tax=Toxopla... 543 e-153 UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=G... 543 e-153 UniRef50_C6CYC6 DEAD/DEAH box helicase domain protein n=89 Tax=F... 543 e-153 UniRef50_Q4W7T8 VASA RNA helicase n=1 Tax=Artemia franciscana Re... 543 e-153 UniRef50_D0WN23 ATP-dependent RNA helicase DeaD n=1 Tax=Actinomy... 543 e-153 UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter... 542 e-153 Sequences not found previously or not previously below threshold: >UniRef50_B3RIS6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RIS6_TRIAD Length = 654 Score = 615 bits (1588), Expect = e-175, Method: Composition-based stats. Identities = 140/423 (33%), Positives = 208/423 (49%), Gaps = 12/423 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 FS+ + V+ + +GF TPIQA + P+ L+GRDV G AQTG+GKT+A Sbjct: 73 NIPKPVLSFSEASFPDYVMSEINNQGFKLPTPIQAQSWPVGLSGRDVVGIAQTGSGKTLA 132 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 ++ + ++ + P + R + P ALI+ PTRELA Q+H+ + + YGG Sbjct: 133 YVLPSIIHIKNQPPL--RHGDGPIALILCPTRELAQQVHSVSTTFGRLARINCACIYGGS 190 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 QL+ L GV+I + T GRL+D+ + NL +VLDEADRM D+GF I+ + Sbjct: 191 PKGPQLRELSRGVEICVATPGRLLDFLESRRTNLNRCSYLVLDEADRMLDMGFEPQIKQI 250 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNE 241 + R +++SAT +R LA E + + I + + T H IK+ + E Sbjct: 251 IGSI--KCPRQTVMWSATWPKEIRTLAREFLRDYVQINIGSSDLTTNHNIKQIVEVCREE 308 Query: 242 EKMRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 EK L L+ + + + I+F TK + + + L G V + GD Q +R R+ Sbjct: 309 EKEDKLCKLLSDILRQDEKKTIVFVETKKKSDYLSRRLVRSGWPVLCIHGDKCQSERDRV 368 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L EF G + +L+ATDVAARGL I V V NYD P++ EDYVHRIGRT R+G +G + + Sbjct: 369 LSEFRSGRIPVLIATDVAARGLDISDVKLVINYDFPNNSEDYVHRIGRTARSGKTGTAYT 428 Query: 359 LACEEYALN---LPAIETYIGHSIPVSKYN-PDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 L A+ I DA ++ + R R Sbjct: 429 FFTASNIRQSPNLIALLREANQPINPDLIQLGDAARAEMAQKHRGKMRGRDRFYNRDRNA 488 Query: 415 RNR 417 NR Sbjct: 489 SNR 491 >UniRef50_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WWM6_ALIAD Length = 541 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 145/396 (36%), Positives = 219/396 (55%), Gaps = 10/396 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + F F L+ +V++A+ GF +PIQA +P+ L GRDV GQAQTGTGKT AF Sbjct: 14 ESMSSFESFGLNRRVLQAIHDMGFEEPSPIQAACIPVVLEGRDVIGQAQTGTGKTAAFGI 73 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + + P +A+++ PTRELA+Q+ + +A+ ++ YGG Sbjct: 74 PLVERVSTEPR--------VQAIVLTPTRELAIQVAGEIRKIAKYKRVRSVPIYGGQSIV 125 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L+ GV I+IGT GR++D+ + ++L +++VVLDEAD M D+GFI DI + R Sbjct: 126 HQIRALKQGVQIVIGTPGRVLDHIHRGTLSLSDVRMVVLDEADEMLDMGFIDDIEAILRE 185 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P R MLFSAT V+ LA M + ++I V + T +I + + K+ Sbjct: 186 TPSD--RQTMLFSATFPNEVKRLALRYMRDPQHITVNRGEVTVPQIDQVCYKVLERNKLD 243 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L +++ E IIF TK +++ L A G+ L GD++Q +R R++ +F + Sbjct: 244 SLCRIVDSEDIQLGIIFCRTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKN 303 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 ++++LVATDVAARGL + VTHV NYD+P D E YVHRIGRTGRAG G +I+L Sbjct: 304 EIELLVATDVAARGLDVDDVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREY 363 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE I I V + + + + ++ Sbjct: 364 KLLKQIEREIKQKITVREVPSLEDVAERQAEMWRSK 399 >UniRef50_C4G990 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G990_9FIRM Length = 538 Score = 611 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 151/412 (36%), Positives = 234/412 (56%), Gaps = 8/412 (1%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KFS+F L ++ A+ K G+ TP+Q ++P+ L GRD+ G AQTGTGKT AF H Sbjct: 63 KFSEFGLKKDLLSAIRKAGYEEPTPVQEESIPVILEGRDMIGCAQTGTGKTAAFALPVLH 122 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L + RAL++ PTRELA+QI + + L+ YGG Q+ Sbjct: 123 KLTLLKRP------RVRALVLTPTRELAIQIFDNFKKYGRYLHLRTVCLYGGAKRGPQIG 176 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G DIL+ T GRL+D+ Q+ ++L +++++VLDEADRM D+GF+ D+ + P Sbjct: 177 ALRRGADILVATPGRLLDFMGQDLVDLSSVEILVLDEADRMLDMGFLPDVSRIVESTP-- 234 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 ++R ++FSAT+ VR+LA + + ++V PE + ++++L + S E+K ++ + Sbjct: 235 SKRQTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEAADTVEQKLIFSSREDKREIIAS 294 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+ +E + AI+F TKH +++ L G + GD Q +R L+ F G + + Sbjct: 295 LLTDEAVESAIVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQRQDALNRFKSGKVRV 354 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 +VATDVAARGL IP ++HVFNYD+P++ Y+HRIGRTGRAG SG +I+L CE L Sbjct: 355 MVATDVAARGLDIPKLSHVFNYDVPEEAGAYIHRIGRTGRAGESGIAITLCCEAELDALR 414 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 +E + IP + + + + R R G R+G +N +SG Sbjct: 415 EVEELLEKPIPELQTQWSLPLERKARKGKGGRTRHGRSGYRSGGQKNAGKSG 466 >UniRef50_P24783 ATP-dependent RNA helicase DBP2 n=131 Tax=Eukaryota RepID=DBP2_YEAST Length = 546 Score = 609 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 137/392 (34%), Positives = 211/392 (53%), Gaps = 11/392 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F + V+ ++ +GF T IQ P+ L+GRD+ G A TG+GKT++ Sbjct: 107 DIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLS 166 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 + ++ + P +A + P L++APTRELAVQI + ++ ++ YGG Sbjct: 167 YCLPGIVHINAQPLLA--PGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGV 224 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 +Q++ L G +I+I T GRLID + NL + +VLDEADRM D+GF IR + Sbjct: 225 PKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKI 284 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNE 241 ++ P R +++SAT V++LA + +N+ ++V E H I + + S+ Sbjct: 285 VDQIRPD--RQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDF 342 Query: 242 EKMRLLQTLIE---EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 EK L +E ++ + +IFA+TK C++I +L DG + GD Q++R + Sbjct: 343 EKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWV 402 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L EF G I+VATDVAARG+ + + +V NYD+P + EDYVHRIGRTGRAGA+G +IS Sbjct: 403 LQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAIS 462 Query: 359 LACEEYAL---NLPAIETYIGHSIPVSKYNPD 387 E+ L +I +IP D Sbjct: 463 FFTEQNKGLGAKLISIMREANQNIPPELLKYD 494 >UniRef50_P24782 ATP-dependent RNA helicase dbp2 n=63 Tax=Eukaryota RepID=DBP2_SCHPO Length = 550 Score = 609 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 136/390 (34%), Positives = 207/390 (53%), Gaps = 11/390 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F + V++ +++ GF TPIQ A P+ ++GRD+ G + TG+GKT++ Sbjct: 116 NVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLS 175 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 + ++ + P ++ + P L++APTRELAVQI + +++ ++ YGG Sbjct: 176 YCLPAIVHINAQPLLS--PGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGV 233 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q++ L GV+I I T GRL+D N NL + +VLDEADRM D+GF IR + Sbjct: 234 PRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKI 293 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNE 241 ++ P R ++FSAT V+ LA + +N+ + V + H IK+ + N Sbjct: 294 VDQIRPD--RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNA 351 Query: 242 EKMRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 +K L IEE + ++ +IF TK ++I L DG + GD AQ +R + Sbjct: 352 DKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWV 411 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L+EF G I+VATDVA+RG+ + +THVFNYD P + EDYVHRIGRTGRAGA G + + Sbjct: 412 LNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYT 471 Query: 359 LACEE---YALNLPAIETYIGHSIPVSKYN 385 + A L +I + I Sbjct: 472 YFTSDNAKQARELVSILSEAKQDIDPKLEE 501 >UniRef50_C5LBR0 RNA helicase, putative n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5LBR0_9ALVE Length = 674 Score = 609 bits (1571), Expect = e-173, Method: Composition-based stats. Identities = 137/422 (32%), Positives = 209/422 (49%), Gaps = 16/422 (3%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 Q F + L +++ + + GF TPIQ P+ L+GRD+ G A+TG+GKT+ Sbjct: 205 ENVPNPIQTFDEACLPDYILKEINRAGFEKPTPIQVQGWPVALSGRDMVGIAETGSGKTL 264 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AF+ ++ + P + +K + P LI+APTRELA+QI A+ + ++ + YGG Sbjct: 265 AFMIPAVIHINAQPYL--QKGDGPIVLILAPTRELALQIKAECDRFGRSSRITNTCVYGG 322 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q + L++GV+I I T GRLID+ + NL + +V+DEADRM D+GF +R Sbjct: 323 TQRGPQARALQNGVEICIATPGRLIDFLESGTTNLKRVTYLVMDEADRMLDMGFEPQVRK 382 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNN-AEYIEVEPEQKTGHRIKEELFYPSN 240 + ++ P R +++SAT V+ LA + N + V H I++ + N Sbjct: 383 IVSQIRPD--RQTLMWSATWPKEVQHLARDICNEEPVLVTVGRSGHACHNIQQYVEVVEN 440 Query: 241 EEKMRLLQTLIEEEW-------PDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQK 293 K L L++ + +IF +TK ++I L DG + GD Q Sbjct: 441 NVKPERLLALMQAASAATGGGWTAKTLIFCDTKRGADDITRLLRRDGWPALSIHGDKKQS 500 Query: 294 KRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGAS 353 +R +L++F G I++ATDVA+RGL + V +V NYD P EDYVHRIGRTGRAGAS Sbjct: 501 ERDWVLNQFKTGRSAIMIATDVASRGLDVKDVKYVINYDFPGTIEDYVHRIGRTGRAGAS 560 Query: 354 GHSISLACEEYALNLPAI---ETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRR 410 G + S + + S+P A D R + G + Sbjct: 561 GVAYSFFSPDKGKLARQLVNCLREANQSVP-EALETIAFANDRSNSGGKGRGKGNYGGKG 619 Query: 411 TG 412 G Sbjct: 620 RG 621 >UniRef50_Q8MZI3 CG10077, isoform A n=15 Tax=Eukaryota RepID=Q8MZI3_DROME Length = 818 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 138/390 (35%), Positives = 207/390 (53%), Gaps = 11/390 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + +F + V+ + K+GF T IQA P+ ++GRD+ G AQTG+GKT+A Sbjct: 151 QVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLA 210 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 ++ ++ + P + + + P AL++APTRELA QI A T ++ +GG Sbjct: 211 YVLPAVVHINNQPRL--ERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGA 268 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 +Q + LE GV+I+I T GRLID+ ++ +L +VLDEADRM D+GF IR + Sbjct: 269 PKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKI 328 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSNE 241 +++ P R +++SAT VR+LA E +NN + + H I + + Sbjct: 329 MQQIRPD--RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDEN 386 Query: 242 EKMRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 EK+ L L+ + E + IIF TK R +EI +++ G R + GD +Q++R + Sbjct: 387 EKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFV 446 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L F G ILVATDVAARGL + V V NYD P + EDYVHRIGRTGR+ +G + + Sbjct: 447 LSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYT 506 Query: 359 LACEEYALN---LPAIETYIGHSIPVSKYN 385 L A L + +I N Sbjct: 507 LFTHSNANKANDLIQVLREANQTINPKLMN 536 >UniRef50_P17844 Probable ATP-dependent RNA helicase DDX5 n=52 Tax=Fungi/Metazoa group RepID=DDX5_HUMAN Length = 614 Score = 602 bits (1553), Expect = e-171, Method: Composition-based stats. Identities = 136/426 (31%), Positives = 207/426 (48%), Gaps = 16/426 (3%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F + V++ + ++ F T IQA P+ L+G D+ G AQTG+GKT++ Sbjct: 88 NCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLS 147 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 +L ++ P + + + P L++APTRELA Q+ A A LK YGG Sbjct: 148 YLLPAIVHINHQPFL--ERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGA 205 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q++ LE GV+I I T GRLID+ + NL +VLDEADRM D+GF IR + Sbjct: 206 PKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKI 265 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNE 241 ++ P R +++SAT VR+LA + + + +I + E H I + + + Sbjct: 266 VDQIRPD--RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDV 323 Query: 242 EKMRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 EK L L+EE E ++ I+F TK RC+E+ + DG + GD +Q++R + Sbjct: 324 EKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWV 383 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L+EF G IL+ATDVA+RGL + V V NYD P+ EDY+HRIGRT R+ +G + + Sbjct: 384 LNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYT 443 Query: 359 LACE---EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 + +L ++ +I R R Sbjct: 444 FFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGM-----KDDRRDRYS 498 Query: 416 NRRRSG 421 +R G Sbjct: 499 AGKRGG 504 >UniRef50_Q92841 Probable ATP-dependent RNA helicase DDX17 n=25 Tax=Bilateria RepID=DDX17_HUMAN Length = 650 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 141/409 (34%), Positives = 203/409 (49%), Gaps = 11/409 (2%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 F V++ L + F TPIQ PL L+GRD+ G AQTG+GKT+A+L Sbjct: 88 PKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYL 147 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 ++ P + + + P L++APTRELA Q+ A+ + + LK YGG Sbjct: 148 LPAIVHINHQPYL--ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 205 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q++ LE GV+I I T GRLID+ + NL +VLDEADRM D+GF IR + Sbjct: 206 GPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 265 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEK 243 ++ P R +++SAT VR+LA + + + I V E H I + + EK Sbjct: 266 QIRPD--RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEK 323 Query: 244 MRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 L L+EE E ++ IIF TK RC+++ + DG + GD +Q +R +L+ Sbjct: 324 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 383 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 EF G IL+ATDVA+RGL + V V NYD P+ EDYVHRIGRT R+ G + + Sbjct: 384 EFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF 443 Query: 361 CE---EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGN 406 + A L + +I +R RT + Sbjct: 444 TPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGGRSRYRTTS 492 >UniRef50_D2QWU0 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWU0_9PLAN Length = 598 Score = 599 bits (1545), Expect = e-170, Method: Composition-based stats. Identities = 162/404 (40%), Positives = 223/404 (55%), Gaps = 5/404 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F D L +V AL + T IQ A+P +AGRD+ G AQTGTGKT AF Sbjct: 1 MSFEDLGLAEPLVRALNAANYTEPTAIQLQAIPPAIAGRDLQGCAQTGTGKTAAFALPLL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L+ +P + PRAL+++PTRELA QIH YGG Q+ Sbjct: 61 DRLIKNPRQGKLRGRLPRALVLSPTRELAGQIHDSVRRYGRHAMQNSLTIYGGVSQVPQV 120 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L +G D+LI T GRL D +Q +INL I+V VLDEADRM D+GF+ DIR + ++P Sbjct: 121 KGLNAGQDVLIATPGRLCDLMQQGYINLSEIEVFVLDEADRMLDMGFMPDIRRIIAKLP- 179 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 Q+ +LFSAT+ +++LA + +++ I +EPE+ T I + L+Y + K LL Sbjct: 180 -QQKQTLLFSATMPPEIQKLASQLLHDPVEINIEPERATADGITQSLYYVPTKHKPELLA 238 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++++ E RA++F TKH C + L G +V + G+ +Q R R L F G + Sbjct: 239 SVLKREEVTRAVVFVRTKHGCNKAALQLEKTGLKVDAIHGNKSQSARQRTLYAFKNGHIQ 298 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGL + V+HV NYDLP + E YVHRIGRTGRAG SG +IS +E L Sbjct: 299 VLVATDVAARGLDVTGVSHVINYDLPMEPETYVHRIGRTGRAGKSGIAISFCDDEQRGLL 358 Query: 369 PAIETYIGHSIPVSKYNPD---ALMTDLPKPLRLTRPRTGNGPR 409 ++ +G IPV PD L ++ + R GN Sbjct: 359 RDVQRILGKKIPVENEMPDGIPGLPANIDRDGGAKRAPWGNKKP 402 >UniRef50_C4ZJL9 DEAD/DEAH box helicase domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZJL9_THASP Length = 545 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 154/401 (38%), Positives = 217/401 (54%), Gaps = 5/401 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+D L P++++A+ G+ TPIQ A+P+ +AG+DV G AQTGTGKT F Sbjct: 1 MSFADLGLIPELLQAVTDAGYTEPTPIQRQAIPIVIAGKDVMGGAQTGTGKTAGFTLPLL 60 Query: 69 HYLLSHPAIADRKVN-QPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 H + H + Q RALI+APTRELA+Q+ + ++ L+ YGG Q Sbjct: 61 HRIARHANTSTSPARHQTRALILAPTRELAMQVFESVKTYSKHLPLRSVCVYGGVDIRPQ 120 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L G++I+I T GRL+D+ +Q INL ++V+VLDEADRM D+GFI DI+ + +P Sbjct: 121 QAELRRGIEIVIATPGRLLDHLEQKSINLSQVEVLVLDEADRMLDMGFIPDIKRILALLP 180 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 QR ++LFSAT S ++ LA + + + IEV I + S+ K LL Sbjct: 181 --KQRQSLLFSATFSDEIKRLADQMLKEPQLIEVARRNMVSETITHVVHPVSSGMKRNLL 238 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+ + +A++F +TK C + +L G + GD Q++R L+ F G L Sbjct: 239 AHLLRHKPDTQALVFVDTKLMCGRLAHYLERSGISADAIHGDKGQQQRTDTLEAFKSGKL 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVAARGL I + V N++LP EDYVHRIGRTGRAG G++ISL E Sbjct: 299 RVLVATDVAARGLDIDELPFVINFELPHTAEDYVHRIGRTGRAGHHGYAISLVSSEEKHW 358 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGP 408 L IE I IP + D + +R G P Sbjct: 359 LSEIEKLIKLQIPQERVPGFDPDPDFHE--AGSRGHRGRRP 397 >UniRef50_D2LSA7 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSA7_BACS4 Length = 528 Score = 597 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 138/394 (35%), Positives = 217/394 (55%), Gaps = 10/394 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 KF DF + + +A++ GF +PIQ +P L G DV GQAQTGTGKT AF Sbjct: 1 MMKFEDFQISNDIKKAIKDMGFEAPSPIQEKVIPEILKGHDVIGQAQTGTGKTAAFGIPL 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + S Q ++LI+ PTRELA+Q+ + + L++ ++ YGG Q Sbjct: 61 LEKVTSD--------RQVQSLILTPTRELAIQVAGELQKLSKFKRSQILPIYGGQSIGHQ 112 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 +K L+ GV +++GT GR++D+ + + L ++ ++LDEAD M D+GFI+DI + +++ Sbjct: 113 IKALKRGVQVVVGTPGRVLDHLNRKTLQLRSVHTLILDEADEMLDMGFIEDIEKILQQV- 171 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R MLFSAT+ +R+L+ + MNN + + + + T I + F + K+ L Sbjct: 172 -NTNRQTMLFSATMPPPIRKLSNKYMNNPKQVTISKGEVTAPSINQVYFKVLEKNKLDSL 230 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I+ E D IIF TK E+ L A G+ L GD+ Q +R ++ +F + Sbjct: 231 CRVIDSETIDLGIIFCRTKKGVAELTEALQARGYMADGLHGDLTQSQRDIVMKKFRDSSI 290 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 + L+ATDVAARG+ + V+HV NYD+P D E YVHRIGRTGRAG G +++L + Sbjct: 291 EFLIATDVAARGIDVENVSHVINYDIPQDPESYVHRIGRTGRAGREGVAVTLVTPREMKH 350 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L +IE I +IP + + + + + + Sbjct: 351 LRSIEAEIKMTIPSQRIPSVEEVVEKQQHVWKGQ 384 >UniRef50_D2RJY3 DEAD/DEAH box helicase domain protein n=2 Tax=Firmicutes RepID=D2RJY3_ACIFE Length = 544 Score = 597 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 140/405 (34%), Positives = 222/405 (54%), Gaps = 15/405 (3%) Query: 1 MSKTH----LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTG 56 M T F D L K++ AL++ GF +PIQ A+P+ L G D+ GQAQTG Sbjct: 7 MENTTAESKPEITSFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMALEGEDLIGQAQTG 66 Query: 57 TGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLG 116 TGKT AF + + K +AL+M+PTREL +Q+ + + + +++ Sbjct: 67 TGKTAAFGIPIIQKI-------NEKDRHIQALVMSPTRELCIQVADEISKIGKTKRIRVL 119 Query: 117 LAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFI 176 YGG ++Q++ L+ G+ ++IGT GRL+D+ ++ I+L + +VLDEAD M D+GF+ Sbjct: 120 PVYGGQPIERQIRSLKRGIQVVIGTPGRLLDHIRRGTIDLEYVNFLVLDEADEMLDMGFV 179 Query: 177 KDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 D+ + + +PP +R MLFSAT+ + ++ + M + + + E T I + + Sbjct: 180 DDMENIIKNVPP--ERQTMLFSATMPRPILSISKKYMRAPKVVAIHKEVVTAPTIDQYYY 237 Query: 237 YPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 +K+ L +++ + IIF TK +E+ LA G+ L GD++Q +R Sbjct: 238 ET--RDKVDGLCRILDTTDDCKMIIFCRTKKGVDELVIALATRGYEAEGLHGDLSQNQRD 295 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 R++ +F G +DILVATDVAARGL I +THV N+D+P D E YVHRIGRTGRAG +G + Sbjct: 296 RVMKKFRSGQVDILVATDVAARGLDIDNITHVVNFDVPSDSESYVHRIGRTGRAGNTGVA 355 Query: 357 ISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 ++ L IE I I DA + + + +++ Sbjct: 356 LTFITPREFRQLKLIERSIKTKIIRGTLPTDASVLERQREQIVSK 400 >UniRef50_Q82T78 RhlE; ATP-dependent RNA helicase RhlE n=1 Tax=Nitrosomonas europaea RepID=Q82T78_NITEU Length = 498 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 152/418 (36%), Positives = 223/418 (53%), Gaps = 9/418 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 + F+ L +++ A+ +G+ N TPIQA +P LAG+DV AQTGTGKT F Sbjct: 3 NDVTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLP 62 Query: 67 TFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + L ++ + P RALIMAPTRELA+QI + L+ + +GG + Sbjct: 63 LLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIE 122 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L++GV+IL+ T GRL+D +Q +N +++VLDEADRM D+GF+ DI+ + Sbjct: 123 PQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMAL 182 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 + P QR +++FSAT S +R+LA + IE + I + + + K Sbjct: 183 LSP--QRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNESISHVIHWVKPDSKFA 240 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL LI ++ +A+IF TKH + L+ + GD Q++R + L EF G Sbjct: 241 LLLHLIRQQNLKQALIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQALAEFKHG 300 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 D+ ILVATDVAARG+ I ++HV NY+LP + EDYVHRIGRTGRAG+ G +ISL E Sbjct: 301 DVQILVATDVAARGIDIEKLSHVINYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHEK 360 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMT------DLPKPLRLTRPRTGNGPRRTGAPRNR 417 L IE + + + D + R GN P G+ ++R Sbjct: 361 ELLANIEKLLNAKLETEQIAGFDAEQFARSLPDRKNRMSAGNSRYGNKPMENGSEKSR 418 >UniRef50_B0TII3 Dead/deah box helicase n=18 Tax=Bacteria RepID=B0TII3_HELMI Length = 540 Score = 594 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 141/400 (35%), Positives = 218/400 (54%), Gaps = 9/400 (2%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 + KF + L PKV +A+ GF +PIQA A+P+ + G+D+ GQAQTGTGKT Sbjct: 11 QDKAKDKVKFGEIELSPKVAKAIFDMGFEEPSPIQAKAIPVIMQGKDLIGQAQTGTGKTA 70 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 F L + + + +AL++ PTRELA+Q+ + + LK YGG Sbjct: 71 TFGIPMAETL-------NPRDGRVQALVLCPTRELAIQVAQEISKIGRQNDLKALPVYGG 123 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 D+Q++ L GV ++IGT GR++D+ + + L +++VVLDEAD M D+GF++DI Sbjct: 124 QSIDRQIRALRYGVQVVIGTPGRILDHLSRKTLRLNNVRMVVLDEADEMLDMGFVEDIEA 183 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + P +R +LFSAT+ +++LA + M E++ + ++ T I++ + Sbjct: 184 ILKETPE--ERQTLLFSATMPGPIQQLARQYMKEPEFVTISRDKLTVPLIEQVYYECKES 241 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 +K+ L +++ E +IIF TK +E+ L G+ L GD+ Q +R R++ + Sbjct: 242 QKVDALCRILDMEEIGSSIIFCRTKRGVDELVAALETRGYFAEGLHGDLTQAQRDRVMKK 301 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G ++L+ATDVAARGL + VTHV NYD+P D E YVHRIGRTGRAG G +I+L Sbjct: 302 FRDGKAELLIATDVAARGLDVENVTHVINYDIPQDPESYVHRIGRTGRAGRKGIAITLIN 361 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE I A + + K + Sbjct: 362 YREYRQLKLIERVTKARIQRRDLPSMADIVERQKEAHKMK 401 >UniRef50_C7PD17 DEAD/DEAH box helicase domain protein n=139 Tax=root RepID=C7PD17_CHIPD Length = 492 Score = 594 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 155/422 (36%), Positives = 223/422 (52%), Gaps = 9/422 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 LT F L +++AL+ +G+ TPIQ A+P L RD+ G AQTGTGKT AF Sbjct: 24 LTILSFEQLGLIEPLLKALDNEGYTAPTPIQQQAIPHVLDTRDLLGCAQTGTGKTAAFAI 83 Query: 66 STFHYLLSHPAIADRKV-NQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 + RK +ALI+ PTRELA+QI + LK + +GG Sbjct: 84 PLLQLMHQDQQAQQRKGLRNIKALILTPTRELAIQIQESFTAYGKFLDLKSLVIFGGVSQ 143 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q + L+ GVDILI T GRL+D QN+I L I+ VLDEADRM D+GF+ D++ + Sbjct: 144 HPQTEALKKGVDILIATPGRLLDLISQNYITLRDIKYFVLDEADRMLDMGFVHDVQRVIV 203 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQM-NNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 ++P QR ++ FSAT+ ++ LA + NN +EV P T I + +++ + +K Sbjct: 204 KLPE--QRQSLFFSATMPPEIQTLAKAILRNNPAKVEVTPVSSTAETITQSMYFVNKNDK 261 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 LL +++++ ++F TKH + + L + G+ +Q R R L+ F Sbjct: 262 RNLLLHILKDKAIKTLLVFTRTKHGADRVVKDLHKAEITAEAIHGNKSQNARQRALNNFK 321 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 +LVATD+AARG+ I +THV NY+LP+ E YVHRIGRTGRAGA G +IS E Sbjct: 322 SQQTRVLVATDIAARGIDIDELTHVVNYELPNVPETYVHRIGRTGRAGADGIAISFCEPE 381 Query: 364 YALNLPAIETYIGHSIPVSKYNP----DALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 L I I IPV +P D++ PKP +P+ + + G +R R Sbjct: 382 EKAFLKDILKLISREIPVETEHPFHNGDSMALPAPKPAPQQKPKQQHPRDKKGGF-SRNR 440 Query: 420 SG 421 G Sbjct: 441 QG 442 >UniRef50_Q5N7W4 DEAD-box ATP-dependent RNA helicase 30 n=3 Tax=Oryza sativa Japonica Group RepID=RH30_ORYSJ Length = 666 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 147/424 (34%), Positives = 213/424 (50%), Gaps = 12/424 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + F + ++A+ K GF TPIQ+ P+ L GRD+ G AQTG+GKT++ Sbjct: 245 DVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLS 304 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 +L ++ + P + + + P LI+APTRELAVQI ++ + + YGG Sbjct: 305 YLLPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGA 362 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF IR + Sbjct: 363 PKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKI 422 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVE-PEQKTGHRIKEELFYPSNE 241 ++ P R + +SAT V LA + + N + + P+ K H I++ + S Sbjct: 423 VAQIRPD--RQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEH 480 Query: 242 EKMRLLQTLIEE-EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EK L L+ + R +IF TK C+++ L DG + GD AQ +R +L Sbjct: 481 EKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLA 540 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 EF G I+ ATDVAARGL + + V N+D P EDY+HRIGRTGRAGASG + + Sbjct: 541 EFKSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFF 600 Query: 361 CEEYA---LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP--- 414 A NL I G + + + + + +R R G G R Sbjct: 601 TLSNAKFSRNLVKILREAGQVVNPALESMAKSASSMGGGNFRSRGRGGFGNRSGSNSIPI 660 Query: 415 RNRR 418 R RR Sbjct: 661 RGRR 664 >UniRef50_Q1ECV0 LOC556764 protein (Fragment) n=21 Tax=Eukaryota RepID=Q1ECV0_DANRE Length = 519 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 138/390 (35%), Positives = 199/390 (51%), Gaps = 11/390 (2%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 S F V++ L ++ F T IQA PL L+GRD+ G AQTG+GKT+ Sbjct: 88 SGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTL 147 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 A+L ++ P + + + P L++APTRELA Q+ A +++ +K YGG Sbjct: 148 AYLLPAIVHINHQPYL--ERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGG 205 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q++ LE GV+I I T GRLID+ + NL +VLDEADRM D+GF IR Sbjct: 206 APKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRK 265 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSN 240 + ++ P R +++SAT VR+LA + + + I + E H I + + Sbjct: 266 IVDQIRPD--RQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCME 323 Query: 241 EEKMRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLR 297 EK L L+EE E ++ IIF TK RC+E+ + DG + GD +Q +R Sbjct: 324 NEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDW 383 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 +L EF G IL+ATDVA+RGL + V V NYD P+ EDYVHRIGRT R+ G + Sbjct: 384 VLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 443 Query: 358 SLACE---EYALNLPAIETYIGHSIPVSKY 384 + A +L + +I Sbjct: 444 TFFTPGNLRQARDLVRVLEEARQAINPKLL 473 >UniRef50_A2SQE1 DEAD/DEAH box helicase domain protein n=17 Tax=cellular organisms RepID=A2SQE1_METLZ Length = 656 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 227/400 (56%), Gaps = 10/400 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + F++FA+ ++++A+ GF TPIQA+A+P L G+DV GQAQTGTGKT AF Sbjct: 2 EETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGI 61 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGY 124 L D +AL+++PTRELA+Q + L + GL + YGG Sbjct: 62 PIIERL-------DPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPI 114 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 ++QL+ L+ V ++IGT GR+ID+ K+ ++L ++ + +LDEAD+M D+GF +DI +FR Sbjct: 115 ERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFR 174 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 P R +LFSAT+ + ++ + +++++ ++ T +I++ +K+ Sbjct: 175 DTPKD--RQTILFSATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTYIEVRERDKL 232 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L ++ P+ A++F NTK +++ + A G+ V L GD+ Q++R R++ F Sbjct: 233 EALCRTLDMNNPELALVFCNTKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVMARFRS 292 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G +D+L+ATDVAARG+ + V VFNYD+P D E YVHRIGRT RAG +G S++ Sbjct: 293 GSIDVLIATDVAARGIDVDDVDIVFNYDVPQDVEYYVHRIGRTARAGRTGKSVTFVAPRE 352 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 L I+ Y I + + ++ + + L + R Sbjct: 353 IYKLRDIQRYAKIQIAKTPLPTLDDVAEMKQQIFLDKVRD 392 >UniRef50_Q2SZW4 ATP-dependent RNA helicase RhlE n=104 Tax=Proteobacteria RepID=Q2SZW4_BURTA Length = 571 Score = 592 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 154/419 (36%), Positives = 226/419 (53%), Gaps = 14/419 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F F L +++ A+ ++G+ TPIQA A+P+ L+GRDV G AQTGTGKT +F Sbjct: 102 TFDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 161 Query: 70 YLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LL + P RALI+ PTRELA Q+ A+ A+ T L+ + +GG + Q+ Sbjct: 162 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 221 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L GV+ILI T GRL+D+ +Q NLG +Q++VLDEADRM D+GF+ D++ + +P Sbjct: 222 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLP- 280 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSAT S +++LA + N + IEV + + ++ + +K + Sbjct: 281 -KERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 339 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI + + I+F N+K + + DG + GD +Q +R++ LD F RG+++ Sbjct: 340 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIE 399 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 LVATDVAARGL I + V N+DLP + EDYVHRIGRTGRAGASG ++SL L Sbjct: 400 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 459 Query: 369 PAIETYIGHSIPVSKYNPDALMTD-----------LPKPLRLTRPRTGNGPRRTGAPRN 416 IE I ++ + D + + R G R PR Sbjct: 460 ADIEKLIKRTLSLETLELDLPRHRHDERGGRRERERDERRGASAGRRSAGGERAHHPRR 518 >UniRef50_Q5L3G9 DEAD-box ATP-dependent RNA helicase cshA n=94 Tax=Firmicutes RepID=CSHA_GEOKA Length = 467 Score = 592 bits (1528), Expect = e-168, Method: Composition-based stats. Identities = 141/394 (35%), Positives = 224/394 (56%), Gaps = 9/394 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F + L +V++A+E+ GF TPIQA +PL+L +DV GQAQTGTGKT AF Sbjct: 1 MTTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + + K + +AL++APTRELA+Q+ + + +++ YGG ++Q Sbjct: 61 VEKV-------NVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQ 113 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L+ +++GT GR+ID+ + + L + VVLDEAD M ++GFI+DI + +P Sbjct: 114 IRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVP 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R +LFSAT+ +R +A MN E ++V+ ++ T I++ ++K +L Sbjct: 174 A--ERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDIL 231 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ + P+ AI+F TK R +E+ L G+ + GD++Q KRL +L +F G + Sbjct: 232 TRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAI 291 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +ILVATDVAARGL I VTHV+N+D+P D E YVHRIGRTGRAG +G +++ Sbjct: 292 EILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQ 351 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE + K + + + + + Sbjct: 352 LHHIERTTKRKMERMKPPTLDEALEGQQRIAIEK 385 >UniRef50_P25888 ATP-dependent RNA helicase rhlE n=363 Tax=root RepID=RHLE_ECOLI Length = 454 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 144/381 (37%), Positives = 212/381 (55%), Gaps = 3/381 (0%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L P ++ A+ ++G+ TPIQ A+P L GRD+ AQTGTGKT F Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 +L++ A + RALI+ PTRELA QI + ++ ++ + +GG + Q+ Sbjct: 61 QHLITRQPHAKGR-RPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L GVD+L+ T GRL+D QN + L ++++VLDEADRM D+GFI DIR + ++P Sbjct: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+LFSAT S ++ LA + ++N IEV ++ + + + + K LL Sbjct: 180 --KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +I + + ++F TKH + L DG R + G+ +Q R R L +F GD+ Sbjct: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARGL I + HV NY+LP+ EDYVHRIGRTGRA A+G ++SL C + L Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357 Query: 369 PAIETYIGHSIPVSKYNPDAL 389 IE + IP Sbjct: 358 RDIEKLLKKEIPRIAIPGYEP 378 >UniRef50_A6T3R2 ATP-dependent RNA helicase n=86 Tax=Bacteria RepID=A6T3R2_JANMA Length = 778 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 148/402 (36%), Positives = 216/402 (53%), Gaps = 12/402 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+ F+D L ++ L++ G+ + +PIQA +PL L RDV GQAQTGTGKT Sbjct: 1 MSEPSFPL--FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKT 58 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAY 119 +F + D K P+AL++APTRELA+Q+ + A G + Y Sbjct: 59 ASFALPILARI-------DIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIY 111 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y QL L GV +++GT GR+ID+ ++ ++L I+ +VLDEAD M +GFI D+ Sbjct: 112 GGQSYGAQLSALRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDV 171 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + ++ P + R LFSAT+ ++ +A + + + I V + T I++ + S Sbjct: 172 ETILQKTPES--RQTALFSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRYWLVS 229 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K+ L ++E E D IIFA TK EE+ L A G + GD+ Q++R R + Sbjct: 230 GMQKLDALTRILEAENFDGMIIFARTKLGTEELASKLQARGFSAAAINGDIQQQQRERTI 289 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + G +DILVATDVAARGL + ++HV NYD+P D E Y HRIGRTGRAG SG +I Sbjct: 290 QQLKDGKIDILVATDVAARGLDVERISHVINYDVPHDPESYTHRIGRTGRAGRSGEAILF 349 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L AIE I V + + D+ + Sbjct: 350 IAPRERNLLKAIERATRQPISVLELPSVEAVNDVRISRFKEQ 391 >UniRef50_A2QC74 ATP-dependent RNA helicase dbp2 n=35 Tax=Eukaryota RepID=DBP2_ASPNC Length = 565 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 138/390 (35%), Positives = 208/390 (53%), Gaps = 11/390 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + F + V+ ++ +GF T IQ+ P+ L+GRDV G A+TG+GKT+ Sbjct: 131 NVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLT 190 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 + ++ + P +A + P LI+APTRELAVQI A+ +++ ++ YGG Sbjct: 191 YCLPAIVHINAQPLLA--PGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGV 248 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q++ L GV++ I T GRLID + NL + +VLDEADRM D+GF IR + Sbjct: 249 PKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI 308 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNE 241 ++ P R ++SAT VR+LA + +N+ + + + HRI + + S+ Sbjct: 309 ISQIRPD--RQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDF 366 Query: 242 EKMRLLQTLIE---EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 EK + +E E ++ +IF TK +EI L DG + GD Q++R + Sbjct: 367 EKRDKMIKHLEKIMENRANKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWV 426 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L+EF G I+VATDVA+RG+ + +THV NYD P++ EDYVHRIGRTGRAGA G +I+ Sbjct: 427 LNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAIT 486 Query: 359 LAC---EEYALNLPAIETYIGHSIPVSKYN 385 + A +L I T I Sbjct: 487 FFTTDNSKQARDLVTILTEAKQQIDPRLAE 516 >UniRef50_B4SPP3 DEAD/DEAH box helicase domain protein n=16 Tax=cellular organisms RepID=B4SPP3_STRM5 Length = 646 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 147/402 (36%), Positives = 217/402 (53%), Gaps = 10/402 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+ + +F+ L V++A+ G+ +PIQA +P L GRDV GQAQTGTGKT Sbjct: 1 MSQESQAQLQFAQLGLSESVMQAVTAIGYETPSPIQAATIPAMLEGRDVLGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAY 119 AF + +P+AL++APTRELA+Q+ + + + G ++ Y Sbjct: 61 AAFALPVLSNIDLQQI-------KPQALVLAPTRELAIQVAEAFQSYSSKIPGFRVLPVY 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y +QL L GV I++GT GR+ID+ ++ ++L ++ +VLDEAD M +GFI D+ Sbjct: 114 GGQPYGQQLSALRRGVHIVVGTPGRVIDHLDRSTLDLSELKTLVLDEADEMLRMGFIDDV 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + +++P +R LFSAT+ ++R +A + + + + + T I++ ++ S Sbjct: 174 EAVLKKLPA--KRQVALFSATMPPQIRRIAQTYLQDPVEVTIAAKTTTSANIRQRYWWVS 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ L ++E E D IIFA TK EE+ L A G + GD+ Q +R R + Sbjct: 232 GMHKLDALTRILEVEPFDAMIIFARTKAGTEELASKLQARGLAAAAINGDMQQAQRERTI 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 G LDILVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 292 AMLKEGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILF 351 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 A L IE I + + D +R Sbjct: 352 ATPREKGMLRQIERATRQPIEEMQLPSVEAVNDNRINKFTSR 393 >UniRef50_Q0HYG8 DEAD/DEAH box helicase domain protein n=78 Tax=Bacteria RepID=Q0HYG8_SHESR Length = 549 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 150/421 (35%), Positives = 220/421 (52%), Gaps = 13/421 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FS L + +A+ ++G+ +PIQA A+P L G+DV AQTGTGKT F Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L K Q RAL++ PTRELA Q+ E + L+ + +GG + Q+ Sbjct: 61 ELLSK---GNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQI 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVD+L+ T GRL+D +QN + ++++VLDEADRM D+GFI+DI+ + +P Sbjct: 118 QKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPA 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N++FSAT S +RELA +N I V P + +K+ + +K LL Sbjct: 178 --KRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLI 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI++E + ++F+ TKH + L + G+ +Q R + L +F G++ Sbjct: 236 QLIKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVR 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARGL I + V N+DLP+ EDYVHRIGRTGRAGASG ++SL E L Sbjct: 296 VLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEFKLL 355 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLP--------KPLRLTRPRTGNGPRRTGAPRNRRRS 420 IE I + + LP K ++ + R G P R + Sbjct: 356 RDIERLINRVLERQEIEGFGPAHALPESTLIAHGKDNKVKAVASQRKHRSAGKPTPRTGT 415 Query: 421 G 421 G Sbjct: 416 G 416 >UniRef50_A3FQ59 Putative uncharacterized protein n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FQ59_CRYPV Length = 586 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 138/426 (32%), Positives = 200/426 (46%), Gaps = 13/426 (3%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 F +V+AL + GF T IQ P+ L+G D+ G A+TG+GKT+ Sbjct: 161 ENVPKPITSFVTSGFPNFLVDALYRTGFTEPTAIQVQGWPVALSGHDMIGIAETGSGKTL 220 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 FL ++ + P + R + P L++APTREL QI A L+ YGG Sbjct: 221 GFLLPAMIHIRAQPLL--RYGDGPICLVLAPTRELVEQIREQANQFGSIFKLRNTAIYGG 278 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q + +GV+I I GRLID ++ + NL + +VLDEADRM D+GF IR Sbjct: 279 VPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRK 338 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNN-AEYIEVEPEQ--KTGHRIKEELFYP 238 L ++ P R +L+SAT V++LA + +I V K H IK+ + Sbjct: 339 LVSQIRPD--RQTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVV 396 Query: 239 SNEEKMRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKR 295 EK L+ + + E + +IF TK + + L DG + GD Q++R Sbjct: 397 EESEKKAKLKMFLGQVMVESAPKVLIFCETKRGADILTKELRLDGWPALCIHGDKKQEER 456 Query: 296 LRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGH 355 +L+EF G I++ATDVAARGL I + V N+D P+ EDY+HRIGRTGRAGA+G Sbjct: 457 TWVLNEFRTGASPIMIATDVAARGLDIKDINFVINFDFPNQIEDYIHRIGRTGRAGATGV 516 Query: 356 SISLACEEYALN---LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG 412 S+S + L + +P + + R N G Sbjct: 517 SLSFFTPDKYRMASDLIKVLKEAKQRVPPELFKLSPQNKRMHPRNTGFRRNNPNSLPLGG 576 Query: 413 APRNRR 418 + R R Sbjct: 577 SNRAYR 582 >UniRef50_Q0AFH3 DEAD/DEAH box helicase domain protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AFH3_NITEC Length = 488 Score = 589 bits (1520), Expect = e-167, Method: Composition-based stats. Identities = 152/423 (35%), Positives = 228/423 (53%), Gaps = 10/423 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 ++ F L +++ A+ +G+ N TPIQA +P LAG+DV AQTGTGKT F Sbjct: 3 SDVTFEQLDLSSEILRAVIDEGYINPTPIQAQVIPPILAGKDVMASAQTGTGKTAGFTLP 62 Query: 67 TFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 H+L +H + + P RALIMAPTRELA+QI + L+ + +GG + Sbjct: 63 LLHHLQAHASSSTSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTTVVFGGVNIE 122 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L +GV+IL+ T GRL+D + +N +++VLDEADRM D+GF+ DI+ + Sbjct: 123 PQITELRNGVEILVATPGRLLDLVEHKAVNFSKTEILVLDEADRMLDMGFLPDIKKVMAL 182 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P +QR +++FSAT S +R+LA + + IEV + I + E K Sbjct: 183 LP--SQRQSLMFSATFSDEIRKLADGLLKHPVRIEVAAQNTINESISHVVHRIKPESKFA 240 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL L++++ +A++F TKH ++ L+ + GD Q++R + L EF G Sbjct: 241 LLLHLVKQQDLKQALVFVKTKHGASQLAQMLSHHKILALAIHGDKNQQQRTQALSEFKHG 300 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 D+ ILVATDVAARG+ I ++HV NY+LP + EDYVHRIGRTGRAG+ G +ISL E Sbjct: 301 DVQILVATDVAARGIDIEKLSHVVNYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHET 360 Query: 366 LNLPAIETYIGHSIPVSKYNPDAL------MTDLPKPLRLTRPRTGNGPRR-TGAPRNRR 418 L +IE + + + + + D + R N + R+ Sbjct: 361 ELLTSIEKLLNTKLEIEQIAGFDAELFVRSLPDRKNRVSADIARRSNKQAEVANGEKTRK 420 Query: 419 RSG 421 SG Sbjct: 421 YSG 423 >UniRef50_Q54CE0 Probable ATP-dependent RNA helicase ddx17 n=2 Tax=Eukaryota RepID=DDX17_DICDI Length = 785 Score = 588 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 129/385 (33%), Positives = 208/385 (54%), Gaps = 9/385 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + +F+ +++ + GF N TPIQ+ A P+ L GRD+ G A+TG+GKT+A Sbjct: 378 EVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLA 437 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL + ++ + P + R+ + P L++APTRELA+QI + + + YGG Sbjct: 438 FLLPSIVHINAQPVL--REDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGA 495 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q+ L+ GV+I+I T GRLID + NL + +VLDEADRM D+GF IR + Sbjct: 496 SKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI 555 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKT-GHRIKEELFYPSNE 241 ++ P R ++FSAT V+ LA + + + + + + T H +++ + + Sbjct: 556 ISQIRPD--RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDF 613 Query: 242 EKMRLLQTLIEEEW-PDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EK + + + ++ I+FA T+ +++ L G + + G+ +Q +R +L Sbjct: 614 EKKERMLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLS 673 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F G + I++ATDVA+RGL I + +V NYD P+ E Y+HRIGRT RAGASG S SL Sbjct: 674 QFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLL 733 Query: 361 CEEYALN---LPAIETYIGHSIPVS 382 + A L + T IP+ Sbjct: 734 TTDNARLANELIKVLTEAKQKIPIE 758 >UniRef50_D2QGG1 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D2QGG1_9SPHI Length = 485 Score = 587 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 141/378 (37%), Positives = 216/378 (57%), Gaps = 2/378 (0%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 +FS+ +L +++AL ++G+ N TPIQ A+P+ L+ RD+ G AQTGTGKT AF Sbjct: 1 MQFSELSLIDPILKALTEEGYTNPTPIQEKAIPILLSRRDLLGCAQTGTGKTAAFAIPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + + + + LI+ PTRELA+QI ++ + +GG Q+ Sbjct: 61 QLLSEERSKSTGGPRRIKTLILTPTRELAIQIAESFTAYGRHLNIRNTVIFGGVSQHSQV 120 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L++GVD+LI T GRL+D Q I+L +Q VLDEADRM D+GFI D++ + ++P Sbjct: 121 NTLKAGVDVLIATPGRLLDLMNQGFISLRDVQFFVLDEADRMLDMGFIHDVKKVITKLPT 180 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R ++ FSAT+ V +LA +NN +EV P T I++ +++ E+K +LL Sbjct: 181 H--RQSLFFSATMPPDVAKLADTILNNPAKVEVTPVSSTADTIEQAMYFVGKEDKRKLLV 238 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++++ A++FA TKH +++ L G + G+ +Q R R L F + Sbjct: 239 HILDDKNIKSALVFARTKHGADKVVKDLLKAGIGAEAIHGNKSQNARQRALSNFKSRETR 298 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ + ++HV NY+LP+ E YVHRIGRTGRAG G ++S E L Sbjct: 299 VLVATDIAARGIDVDELSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCDAEETEYL 358 Query: 369 PAIETYIGHSIPVSKYNP 386 I IG +PV +P Sbjct: 359 RDIHKLIGKRVPVIDNHP 376 >UniRef50_Q81IT9 DEAD-box ATP-dependent RNA helicase cshA n=84 Tax=cellular organisms RepID=CSHA_BACCR Length = 533 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 132/394 (33%), Positives = 215/394 (54%), Gaps = 9/394 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F + L +++++E GF TPIQA +P L G+D+ GQAQTGTGKT AF Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + D + +++APTRELA+Q+ + + + +++ YGG ++Q Sbjct: 61 LDKV-------DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQ 113 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L+ I++GT GR++D+ + + L ++ VVLDEAD M ++GFI+DI + +P Sbjct: 114 IRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVP 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 + +LFSAT+ +R +A M ++I+V+ ++ T I++ ++K +L Sbjct: 174 ETH--QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVL 231 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ + P+ AI+F TK R +E+ L G+ + GD+ Q KR+ +L +F G + Sbjct: 232 TRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ++LVATDVAARGL I VTHV+N+D+P D E YVHRIGRTGRAG G ++ + Sbjct: 292 EVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQ 351 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE + + + L + Sbjct: 352 LKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEK 385 >UniRef50_C4Q0V4 DEAD box ATP-dependent RNA helicase, putative n=1 Tax=Schistosoma mansoni RepID=C4Q0V4_SCHMA Length = 769 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 129/416 (31%), Positives = 200/416 (48%), Gaps = 10/416 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F++ + ++ + K G+ TPIQ+ P+ L+GRDV G AQTG+GKT + Sbjct: 86 DVPRPVLSFNELNVPDYILSVIAKNGWQLPTPIQSQGWPMALSGRDVVGIAQTGSGKTAS 145 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL ++++ P + + P LI+ PTRELA Q+ A+ A+A L+ YGG Sbjct: 146 FLLPAVIHIMAQPRLL--RNEGPICLILVPTRELAQQVLVVAKEFADAASLRAMCFYGGS 203 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAK-QNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 QL+ ++ G +I I T GRLID+ + Q ++ L + +VLDEADRM D+GF IR Sbjct: 204 AKGTQLREMQKGGEICIATPGRLIDFIRVQRNL-LSRVTYLVLDEADRMLDMGFEPQIRK 262 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQK-TGHRIKEELFYPSN 240 + P R +++SAT V+ LA E + + + + I + + + Sbjct: 263 IIGHTRPD--RQTLMWSATWPREVQTLAREFLTDYIQVNIGSVSLHANPNITQIVEIMDD 320 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 K + L L+ R ++F TK R +++ L G V + G Q+ R L Sbjct: 321 WSKEQRLIELLTSFGRARTLVFVETKRRTDQLTNSLRRRGFYVEAMHGGKQQRDRELTLA 380 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F G ++ILVATDVA+RGL I + +V N+D P+ EDY+HRIGRT R+ +G + + Sbjct: 381 NFKSGRMNILVATDVASRGLDIDNIEYVVNFDFPNQTEDYIHRIGRTARSDKTGTAFTFF 440 Query: 361 CE---EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGA 413 A +L I I + L K L + + G Sbjct: 441 THKNVRQARDLIDILDEANQEISAELVQLAGMSNYLRKSSTLKKNPPAFQQKPPGR 496 >UniRef50_Q126W4 DEAD/DEAH box helicase-like n=153 Tax=Bacteria RepID=Q126W4_POLSJ Length = 579 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 152/395 (38%), Positives = 218/395 (55%), Gaps = 4/395 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + L P +++A+ ++G+ TPIQA A+P LAG D+ G AQTGTGKT AF Sbjct: 1 MTFEELKLAPAILKAVLEQGYDTPTPIQAQAIPAVLAGSDLLGGAQTGTGKTAAFTLPML 60 Query: 69 HYLLSHPAIADRKV-NQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L + P + +R+ N RALIM PTRELA Q+ + L + +GG G Q Sbjct: 61 QRLSTEPRLTNRRGVNAVRALIMTPTRELAAQVEESVRTYGKYLDLTSMVMFGGVGMGAQ 120 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L GVDIL+ T GRL+D+A Q ++L +Q++VLDEADRM D+GFI DI+ + +P Sbjct: 121 IDKLRRGVDILVATPGRLLDHAGQGTLDLSQVQILVLDEADRMLDMGFIHDIKKVLALVP 180 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 ++LFSAT S +RELA + + +I+V P T RI + + +K LL Sbjct: 181 KHK--QSLLFSATFSDEIRELANGLLRDPLHIQVTPRNTTVQRITQTIHPVGRSKKKALL 238 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I E + ++F TK + HL +G L G+ +Q R + L F G + Sbjct: 239 THIINEHNWSQVLVFTRTKFGANNVAEHLTKNGIEAMALHGNKSQTARTQALQGFKDGTI 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATD+AARG+ I + HV NY++P+ EDYVHRIGRTGRAG SG ++SL C + Sbjct: 299 RALVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGNSGEAVSLVCLDEEGF 358 Query: 368 LPAIETYIGHSIPVSKYNPDALM-TDLPKPLRLTR 401 + IE + +I + +PL + R Sbjct: 359 MQDIERFTKQNIEKVLVPGFEAEPGERAEPLAMGR 393 >UniRef50_B7VQT9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=B7VQT9_VIBSL Length = 523 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 149/413 (36%), Positives = 225/413 (54%), Gaps = 5/413 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+ L +++A+E +G+ +PIQ A+P L G+DV AQTGTGKT F Sbjct: 1 MSFTSLGLSEPILKAIEAQGYDKPSPIQEKAVPAVLTGKDVMAAAQTGTGKTAGFTLPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L P + + NQ RAL++ PTRELA Q++ L + +GG + Q+ Sbjct: 61 EMLSKGPRV---RQNQVRALVLTPTRELAAQVNGSVVKYGINLPLTSTVVFGGVKINPQM 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L G D+L+ T GRL+D QN + ++++VLDEADRM D+GFI+DIR + +P Sbjct: 118 QKLRKGSDVLVATPGRLLDLYNQNAVRFDQLEILVLDEADRMLDMGFIRDIRKILAFLP- 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+LFSAT S +R LA +NN I V P T +++ ++ ++K +L Sbjct: 177 -KKRQNLLFSATFSDDIRSLAKGLVNNPVEISVSPANSTAPTVEQSIYPVDKKKKAPMLA 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI++ + ++F+ TKH ++ L + G+ +Q R + L+ F G + Sbjct: 236 KLIKDNDWRQVLVFSKTKHGANKLARFLEEQDITSAPIHGNKSQGARTKALENFKTGKVR 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ IP + V N+DLP+ EDYVHRIGRTGRAG G +ISL C + L Sbjct: 296 VLVATDIAARGIDIPQLPQVVNFDLPNVSEDYVHRIGRTGRAGEVGKAISLVCADEVGEL 355 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 IE I + + A + LP+ +RP P++T + +RSG Sbjct: 356 FGIERLIQQVLERRELEGFAPVNKLPESRLDSRPIKPKKPKKTREHSDGQRSG 408 >UniRef50_Q0AVQ9 ATP-dependent RNA helicase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVQ9_SYNWW Length = 530 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 145/404 (35%), Positives = 230/404 (56%), Gaps = 10/404 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ + F L +++ +++KGF TPIQ ++P+ +AG D+ GQAQTGTGKT +F Sbjct: 1 MSFENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + ++ K +AL++ PTRELAVQ+ + L+ +++ YGG + Sbjct: 61 PILNRVI--------KGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIE 112 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 QL+ L +I++GT GRL+D+ + I+L ++ VVLDEAD M D+GF+ DI+ + + Sbjct: 113 LQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQ 172 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P +R LFSATL VREL + M E I +E ++T I++ + ++ K+ Sbjct: 173 CP--RERQTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQVNSRRKIE 230 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L +I+ + P ++IF TK +E+ L + G+ L GD++Q++R ++ F +G Sbjct: 231 TLCRIIDAQQPPISLIFCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVMHGFRQG 290 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 + ILVATD+AARGL I VTHVFN+D+P+D + Y+HR+GRTGRAG SG +I+L Sbjct: 291 NTKILVATDLAARGLDIELVTHVFNFDIPEDLDSYIHRVGRTGRAGRSGIAITLVEPTQI 350 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPR 409 L IE + G I + A + + L L R R + Sbjct: 351 RLLRMIERHTGKRIERALLPTLAEAVEKRQDLLLERVRQASAEP 394 >UniRef50_B2V9H9 DEAD/DEAH box helicase domain protein n=4 Tax=Hydrogenothermaceae RepID=B2V9H9_SULSY Length = 405 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 146/414 (35%), Positives = 221/414 (53%), Gaps = 14/414 (3%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS + F D L + +++L++ G+ T IQ A+P + G+D+ QAQTGTGKT Sbjct: 1 MSN---QGKTFKDLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKT 57 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AF + + K + +ALI+ PTRELA+Q+ + + L + + YG Sbjct: 58 AAFGVPIVEKV-------NPKQKKVQALILVPTRELAIQVAKEIKELGKNKKVYTLAVYG 110 Query: 121 GDGYDKQLKVLESGVDILI-GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 G Q+ L+ G D+++ GT GR+ D ++ +NL +++ VLDEADRM ++GFI DI Sbjct: 111 GKSISHQINFLKKGSDVVVVGTPGRVRDLLERGVLNLDNVKMFVLDEADRMLEMGFIDDI 170 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYP 238 + +P R N+LFSAT+ + +LA E +N N E I V+P++ T +IK+ ++ Sbjct: 171 EEIMSYLPED--RQNLLFSATMPKEILDLAEEFLNENYETIRVKPDEVTVEKIKQIIYRV 228 Query: 239 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 + +K + L ++ + ++ IIF TK +E+ L +G + GD +QKKR + Sbjct: 229 NPRDKFKKLTEVLSQNEAEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETV 288 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L F G L ILVATDVAARGL I V V NY LP D E Y+HRIGRTGRAG G +IS Sbjct: 289 LHNFRTGKLKILVATDVAARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAIS 348 Query: 359 LACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG 412 + L I+ +I V + ++ K + R+ R Sbjct: 349 IMTPSEDKQLQNIQKKTKANIEVINEAQEKKLSSAQKDKSSQKERSSRNQTRRR 402 >UniRef50_Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 n=11 Tax=Viridiplantae RepID=RH40_ORYSJ Length = 792 Score = 584 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 132/426 (30%), Positives = 213/426 (50%), Gaps = 13/426 (3%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F P++++ +++ GF + TPIQA + P+ L +DV A+TG+GKT+ Sbjct: 144 NVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLG 203 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 +L F ++ + + + P L++APTRELA QI +A ++ + YGG Sbjct: 204 YLLPGFMHI---KRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGA 260 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 QL+ L+ GVD+++ T GRL D + I+L + +VLDEADRM D+GF IR + Sbjct: 261 PKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKI 320 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSN 240 + +PP +R ++++AT VR +A + + + + + E I + + + Sbjct: 321 VKEIPP--RRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITP 378 Query: 241 EEKMRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 EK+R L+ ++ + + +IF TK C+++ L + GD +Q +R ++L Sbjct: 379 SEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVL 437 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 F G ILVATDVAARGL I + V NYD P EDYVHRIGRTGRAGA+G + + Sbjct: 438 SHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTF 497 Query: 360 ACEEYALN---LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG-APR 415 C++ + L I +P + + + R+ G + R Sbjct: 498 FCDQDSKYAADLIKILEGANQRVPRDLADMASRGGRGGRKRNRWATRSDRGGSHSELDSR 557 Query: 416 NRRRSG 421 R G Sbjct: 558 YGGRDG 563 >UniRef50_C5CU85 DEAD/DEAH box helicase domain protein n=10 Tax=Comamonadaceae RepID=C5CU85_VARPS Length = 601 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 146/406 (35%), Positives = 221/406 (54%), Gaps = 4/406 (0%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + L P +++A+ + G+ TPIQA A+P L G D+ G AQTGTGKT AF Sbjct: 1 MNFDELKLAPAILKAVHEHGYDTPTPIQAQAIPAVLEGHDLLGGAQTGTGKTAAFTLPML 60 Query: 69 HYLLSHPAIADRKVN-QPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 H L + + ++ RAL++ PTRELA Q+ + L + +GG G + Q Sbjct: 61 HKLSTGASATNKFGGIGIRALVLTPTRELAAQVEESVRTYGKYLELDSTVIFGGVGMNPQ 120 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L+ GVDIL+ T GRL+D +Q ++L +Q+++LDEADRM D+GFI D++ + +P Sbjct: 121 ISKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKILALVP 180 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 ++ ++LFSAT S +R+LA + N + I+V P T RI + + +K LL Sbjct: 181 --KEKQSLLFSATFSDEIRDLAATLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKALL 238 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I E + ++F TK + L +G L G+ +Q R + L F GD+ Sbjct: 239 AHIINENKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGDI 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATD+AARG+ I + HV NY++P+ EDYVHRIGRTGRAG+SG ++S C + Sbjct: 299 RALVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCMDEEGF 358 Query: 368 LPAIETYIGHSIPVSKYNPD-ALMTDLPKPLRLTRPRTGNGPRRTG 412 + IE + +IPV + +P+ + R G R Sbjct: 359 MQEIERFTKQTIPVQFVEGFGPEEGERAEPIAMGRQTIWGGAGRPP 404 >UniRef50_O00571 ATP-dependent RNA helicase DDX3X n=262 Tax=cellular organisms RepID=DDX3X_HUMAN Length = 662 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 131/395 (33%), Positives = 197/395 (49%), Gaps = 17/395 (4%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + FSD + ++ +E + TP+Q A+P+ RD+ AQTG+GKT A Sbjct: 174 NCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAA 233 Query: 63 FLTSTFHYLLSHPAIA-----------DRKVNQPRALIMAPTRELAVQIHADAEPLAEAT 111 FL + S R+ P +L++APTRELAVQI+ +A + + Sbjct: 234 FLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRS 293 Query: 112 GLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMY 171 ++ + YGG +Q++ LE G +L+ T GRL+D ++ I L + +VLDEADRM Sbjct: 294 RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRML 353 Query: 172 DLGFIKDIRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGH 229 D+GF IR + + MPP R M+FSAT ++ LA + ++ ++ V T Sbjct: 354 DMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSE 413 Query: 230 RIKEELFYPSNEEKMRLLQTLIEEEWPDR-AIIFANTKHRCEEIWGHLAADGHRVGLLTG 288 I +++ + +K L L+ D ++F TK + + L +G+ + G Sbjct: 414 NITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHG 473 Query: 289 DVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTG 348 D +Q+ R L +F G ILVAT VAARGL I V HV N+DLP D E+YVHRIGRTG Sbjct: 474 DRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTG 533 Query: 349 RAGASGHSISLACEEYA---LNLPAIETYIGHSIP 380 R G G + S E +L + +P Sbjct: 534 RVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568 >UniRef50_Q65N62 DEAD-box ATP-dependent RNA helicase cshA n=135 Tax=Firmicutes RepID=CSHA_BACLD Length = 487 Score = 583 bits (1504), Expect = e-165, Method: Composition-based stats. Identities = 141/395 (35%), Positives = 221/395 (55%), Gaps = 9/395 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F DF L + +A+++ GF TPIQA +PL LA +DV GQAQTGTGKT AF Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + + + +A+++APTRELA+Q+ + + + ++ YGG +Q++ Sbjct: 64 KI-------NPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIR 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ I++GT GRL+D+ + + L + VVLDEAD M ++GFI+DI + +P Sbjct: 117 ALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPA- 175 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 + +LFSAT+ ++ +A M N E+++V+ ++ T I++ +K L Sbjct: 176 -EHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTR 234 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L++ + P+ AI+F TK R +E+ L G+ + GD+ Q KR+ L +F +G +++ Sbjct: 235 LLDIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEV 294 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL I VTHV+N+D+P D E YVHRIGRTGRAG +G +++ L Sbjct: 295 LVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLR 354 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 AIE + K + + + + R RT Sbjct: 355 AIEQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIRT 389 >UniRef50_A9GRX1 DeaD2 protein n=5 Tax=Bacteria RepID=A9GRX1_SORC5 Length = 478 Score = 582 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 140/394 (35%), Positives = 206/394 (52%), Gaps = 5/394 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 +F+D L ++ A+E +G+ TPIQ A+P L G D+ G AQTGTGKT AF Sbjct: 1 MQFADLKLIEPLLRAIEAEGYSAPTPIQQQAIPPILEGNDLLGCAQTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + R L++ PTRELA Q+ + GL+ + +GG G Q+ Sbjct: 61 QRLAQ---SGGPRQGGLRVLVLTPTRELAAQVAESFTTYGKNLGLRTAVVFGGVGQRPQM 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVD+L+ T GRL+D Q G + +VLDEADRM D+GFI DIR + +P Sbjct: 118 EALRRGVDVLVATPGRLLDLCSQGIAPFGRLDTLVLDEADRMLDMGFIHDIRRVLAMLPE 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSAT+ + +LA + + +EV T I + + + +K +L+ Sbjct: 178 --RRQTLLFSATMPPDILKLANSILRSPVRVEVARIATTAENIDQRVVFVERSDKRAMLE 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++++ RAI+F TKH + L+ + G+ +Q R R L F +G Sbjct: 236 HVLKDPALRRAIVFTRTKHGANRVVQQLSRARIEAVAIHGNKSQGARERALASFKQGTTS 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ I ++HV NYDLP+ E YVHRIGRT RAGASG ++S E L Sbjct: 296 VLVATDIAARGIDIDDISHVINYDLPNIPESYVHRIGRTARAGASGVALSFCDSEERAYL 355 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402 IE I +P+ + P+P + + Sbjct: 356 ADIERLIQKRLPLLADPGVPVFQIDPRPAQQAQG 389 >UniRef50_B1VFV5 ATP-dependent RNA helicase n=35 Tax=cellular organisms RepID=B1VFV5_CORU7 Length = 778 Score = 582 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 146/391 (37%), Positives = 214/391 (54%), Gaps = 10/391 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L P+V +A+ GF +PIQ +PL +AG DV G AQTGTGKT AF Sbjct: 133 FGDLGLSPEVFDAVRAVGFTKPSPIQEQTIPLLMAGEDVVGLAQTGTGKTAAFALPILSR 192 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQLK 129 L + K +P+AL++APTRELA+Q+ E AE G + + YGG Y QL Sbjct: 193 L-------NLKSRKPQALVLAPTRELALQVAESFEDFAEKMGGVNILPIYGGQPYGAQLS 245 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L G +++GT GR+ID+ ++ +++ ++ +VLDEAD M ++GF +D+ + P Sbjct: 246 GLRRGAHVVVGTPGRVIDHLQKGSLDISELRFMVLDEADEMLNMGFQEDVERILEDTPED 305 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 LFSAT+ +R L+ +N+ + + V+ Q+T I+++ + EK+ L Sbjct: 306 K--QVALFSATMPSAIRHLSKRYLNSPQEVTVKSTQRTAENIEQDYLIVHHREKLDALTR 363 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E D I+F TK+ EE+ L A G+ + GD+AQ +R R +D+ G LDI Sbjct: 364 ILEVTDFDAMIMFVRTKNDTEELAERLRARGYEAAAINGDIAQAQRERTVDQLKDGRLDI 423 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL + +THVFNYD+P D E YVHRIGRTGRAG SG ++ L Sbjct: 424 LVATDVAARGLDVERITHVFNYDIPRDTESYVHRIGRTGRAGRSGRAVLFVTPRERRMLK 483 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 +IE + + + + K Sbjct: 484 SIERATKSRLNEIELPSVDQVNEARKAKFNR 514 >UniRef50_C4Q2M5 DEAD box ATP-dependent RNA helicase, putative n=2 Tax=Schistosoma mansoni RepID=C4Q2M5_SCHMA Length = 879 Score = 581 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 130/390 (33%), Positives = 199/390 (51%), Gaps = 8/390 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 KFS+ ++ ++K + + TPIQ P+ L+GRD+ G AQTG+GKT + Sbjct: 71 NVPRPLFKFSEAGFPSYIMSVIKKSKWDSPTPIQCQGWPVALSGRDLVGIAQTGSGKTAS 130 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL + + P++ ++ + P LI+ PTRELA Q+ AE + G K YGG Sbjct: 131 FLLPAIVHAKAQPSL--KRGDGPIVLILVPTRELAQQVEKVAEDFCYSAGFKSACLYGGA 188 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q + L +++I T GRL+D+ + H N+ +VLDEADRM D+GF IR + Sbjct: 189 SRTGQAEALGQSPEVVIATPGRLLDFLESRHTNMRRCTYLVLDEADRMLDMGFEPSIRRV 248 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNE 241 ++ P R +++SAT V+ LA + + + I V + H I++ + + Sbjct: 249 VSQVRPD--RQTLMWSATWPREVKALAEDFLYDYIQINVGSTKLSANHNIRQHVEILNES 306 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 EK + L +L+ R ++F TK R +E+ L G + GD QK+R R LD Sbjct: 307 EKFKRLLSLLNSFDNARVLVFTETKKRTDELCQKLQDKGFDATAMHGDKHQKERDRALDM 366 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +LVATDVA+RGL I V ++ NYD P EDY+HRIGRTGR+ G + + Sbjct: 367 FREGHISVLVATDVASRGLDINDVRYIINYDYPSQTEDYIHRIGRTGRSDKKGTAYTFFS 426 Query: 362 EEY---ALNLPAIETYIGHSIPVSKYNPDA 388 + A L + +IP + Sbjct: 427 AKQPRLARELIEVLKEARQTIPDELFKIAE 456 >UniRef50_A6M3F5 DEAD/DEAH box helicase domain protein n=5 Tax=Clostridium RepID=A6M3F5_CLOB8 Length = 525 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 144/391 (36%), Positives = 227/391 (58%), Gaps = 12/391 (3%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + +F+ L +V+A+ GF + IQ ++P+TL+G D+ GQAQTGTGKT A+ Sbjct: 1 MNDNQFATLGLKESIVKAISDLGFTKPSQIQEQSIPVTLSGADLIGQAQTGTGKTAAYSL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + + ++LI+APTRELAVQ++ + + L++ + YGGD D Sbjct: 61 PIITKMSDN--------RGIKSLILAPTRELAVQVNEEIQRLSKYEKIVTLAVYGGDSID 112 Query: 126 KQLKVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 +Q++ L G VDI++GT GR++D K+ ++L +I+ +VLDEAD M ++GFI DI+ + Sbjct: 113 RQIRALRKGDVDIVVGTPGRILDLVKRKCLHLESIEFLVLDEADEMLNMGFIDDIQEILS 172 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 P ++R +LFSAT+ + +LA + M +A+ + ++ T +I++ F +N+ + Sbjct: 173 HTP--SERQTLLFSATMPDPIAKLAKKYMKPDAKLVSIKRSSLTVSKIEQSYFMINNKHR 230 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 + L L++ + P AIIF TK +E+ L + G+ V + GD+ Q RL L++F Sbjct: 231 LEALCRLLDLDNPSSAIIFCRTKRGVDELVQELQSKGYMVEGMHGDMTQAHRLTTLNKFK 290 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G L++L+ATDVAARG+ + VTHVFNYDLP D E YVHRIGRTGRA SG + SL + Sbjct: 291 EGTLNLLIATDVAARGIDVEGVTHVFNYDLPQDVESYVHRIGRTGRANKSGTAYSLVTPK 350 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLP 394 L I+ SI + + Sbjct: 351 DFSMLKQIQNVTKSSITQKPVPTAEEINNKK 381 >UniRef50_C5RIK3 DEAD/DEAH box helicase domain protein n=3 Tax=Clostridia RepID=C5RIK3_CLOCL Length = 536 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 142/398 (35%), Positives = 223/398 (56%), Gaps = 10/398 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F++ L ++++A+ GF +PIQ+ ++P+ + G D+ GQAQTGTGKT AF + Sbjct: 4 IKTFNELNLKDEILKAINDMGFEEPSPIQSESIPVGIEGYDLIGQAQTGTGKTAAFGSII 63 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + + K P+ALI+APTRELA+Q++ + +A+ L + YGG D+Q Sbjct: 64 LNNMS-------EKRRVPQALILAPTRELAIQVNEELVRIAKNMRLNILPIYGGQPIDRQ 116 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L+ L +GVDI++GT GR++D+ ++ +N ++ +VLDEAD M ++GFI DI + + + Sbjct: 117 LRALRNGVDIVVGTPGRVLDHLRRKSLNTEFVKFLVLDEADEMLNMGFIDDIEEVMKSL- 175 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 R +LFSAT+ ++ L+ M +A+ I +E T I + + N ++ Sbjct: 176 -NEDRQTLLFSATMPDAIKRLSKRYMKSDAKLISIEKNTVTASTITQYYYEIKNSDRFES 234 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L +I+ + P+ AIIF TK +E+ + G+ V + GD+ Q +R+ L +F + Sbjct: 235 LCRIIDADEPEAAIIFCKTKKGVDELVSSMQRRGYVVEGMHGDMNQNQRMNTLKKFKESN 294 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 LD LVATDVAARG+ + VTHV NYDLP D E YVHRIGRTGRA G + +L + Sbjct: 295 LDFLVATDVAARGIDVENVTHVINYDLPQDAESYVHRIGRTGRANKEGKAYTLVTPREYI 354 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 L IE I + + D+ L + R Sbjct: 355 VLKQIEKTTKSKIKRNSVPTVDEIYDVKYKNVLNKVRD 392 >UniRef50_O97032 DjVLGB (Fragment) n=1 Tax=Dugesia japonica RepID=O97032_DUGJA Length = 781 Score = 580 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 142/417 (34%), Positives = 215/417 (51%), Gaps = 5/417 (1%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F + L P + + + TPIQ A+P L RD+ AQTG+GKT AFL Sbjct: 183 IENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPI 242 Query: 68 FHYLLSHPAIADR--KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 ++L+ R K P+ LI+APTRELA+QI ++++ + T L+ + YGG Sbjct: 243 INHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTH 302 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF-- 183 Q++ ++ G +L+ T GRL+D+ ++N I+L + +VLDEADRM D+GF IR + Sbjct: 303 SQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEE 362 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 MP R ++FSAT +++LA + + N ++ V T IK+E+ Y ++ EK Sbjct: 363 SNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIYMTDVEK 422 Query: 244 MRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 + L+ + P+ +IF TK + + L + G+ V + GD +Q +R L F Sbjct: 423 LNYLKNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVEREAALSMF 482 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G ILVAT VAARGL IP V HV NYDLP D E+YVHRIGRTGR G G + S + Sbjct: 483 RNGQCPILVATAVAARGLDIPNVKHVINYDLPSDIEEYVHRIGRTGRLGNHGRATSFYVD 542 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 + + + + + AL +L + + + RR R Sbjct: 543 KNNNIAIDLVDLLKEANQIVPQWLSALADELKRNSTMGSNNKRHNQRRYKNGNFGGR 599 >UniRef50_Q0ST49 ATP-dependent RNA helicase, DEAD/DEAH box family n=23 Tax=cellular organisms RepID=Q0ST49_CLOPS Length = 528 Score = 580 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 143/386 (37%), Positives = 223/386 (57%), Gaps = 8/386 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + KF D L +++A++ GF + IQA ++P+ L G D+ GQAQTGTGKT AF Sbjct: 1 MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGC 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + + A K P+ALI+APTRELA+Q++ + L + L + YGG D Sbjct: 61 AIINN-----ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPID 115 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 +Q++ L++GVDI++GT GR++D ++ + L I +VLDEAD M ++GFI D+ + + Sbjct: 116 RQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKS 175 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 + R +LFSAT+ ++++LA M + ++I ++ T +I++ F + ++ Sbjct: 176 L--KTDRQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRF 233 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L +++ + P+ AIIF TK +E+ + A G+ V + GD++Q RL+ L +F Sbjct: 234 ETLCRVLDFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKE 293 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G LD LVATDVAARG+ + +VTHV NYDLP D E YVHRIGRTGRA G + SL + Sbjct: 294 GSLDFLVATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGVAYSLVTPKE 353 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALM 390 + L I+ + I + Sbjct: 354 YMMLKQIQKHTKSKIIRKAVPTVDEI 379 >UniRef50_C6VX00 DEAD/DEAH box helicase domain protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VX00_DYAFD Length = 590 Score = 580 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 144/398 (36%), Positives = 220/398 (55%), Gaps = 10/398 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T T Q F + L+ +++AL++ GF +PIQA +P L G DV GQAQTGTGKT AF Sbjct: 2 TTETFQTFEELGLNENILKALQEMGFEKPSPIQAQGIPAVLQGSDVIGQAQTGTGKTAAF 61 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGD 122 + D N +ALI+ PTRELAVQ+ + L++ G+++ YGGD Sbjct: 62 GIPVLERI-------DTSSNAVQALILCPTRELAVQVSEELGRLSKFMRGVRIEAIYGGD 114 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 D+Q++ L+ GV I++GT GR++D+ ++ + ++++VLDEAD M D+GF +DI + Sbjct: 115 SIDRQIRSLKKGVHIVVGTPGRVMDHMERRTLKFDEVRMMVLDEADEMLDMGFREDIESI 174 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 MP R +LFSAT+S + + +N+ I+V + T I++ F + Sbjct: 175 LADMPED--RQTILFSATMSKPIMSITKRFLNDPTLIKVVRNELTNQNIEQVYFEVKPQA 232 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K+ ++ LI+ ++F NTK + +EI L G+ + GD+ Q++R ++ +F Sbjct: 233 KVEVMTRLIDMHHIKSLLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKF 292 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G ILVATDVAARG+ + + V NYD+P D E YVHRIGRTGRAG SG + SL Sbjct: 293 KAGVTTILVATDVAARGIDVSGLDGVINYDIPMDEEYYVHRIGRTGRAGMSGKAFSLVAR 352 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 + L +IE+Y I + + K + Sbjct: 353 DEKYRLKSIESYTKVKIEKGVIPSFEDIVGVRKARFVE 390 >UniRef50_C6WW85 DEAD/DEAH box helicase domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW85_METML Length = 576 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 144/413 (34%), Positives = 225/413 (54%), Gaps = 10/413 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L+P ++ A+E+ G+ TPIQA A+P+ + G D+ AQTGTGKT F+ Sbjct: 1 MSFESLNLNPAILRAIEETGYTTPTPIQAQAIPVVMEGHDLMASAQTGTGKTAGFMLPAL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + L + + + PR L++ PTRELA Q++ A + + GG Y Q Sbjct: 61 NLLAT---PHESRSRGPRILVLTPTRELAAQVNEAARKYGKFLRARTVSIVGGMPYPLQN 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K+L +DIL+ T GRL+D+ ++ I+L +Q+++LDEADRM D+GF+ D+ + ++ Sbjct: 118 KLLSQPLDILVATPGRLLDHMERGRIDLSRLQMLILDEADRMLDMGFLPDVERICEQL-- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLL 247 + +R +LFSATL + +A + + N + ++V +++ I++ L + + K +LL Sbjct: 176 SAERQTLLFSATLDGDIARIAQQILKNPKTVQVAAQKEKHANIEQRLHFVDDMTHKNKLL 235 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + L+ ++ IIF +TK + + L A GH+ L GD+ Q R R L + GD+ Sbjct: 236 EHLLIAPEVNQTIIFTSTKRHADVLAEDLYAAGHKTAALHGDMTQGARNRTLTKLRHGDV 295 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATDVAARG+ + +THV NYDLP EDYVHRIGRTGRA +G +IS A Sbjct: 296 KVLVATDVAARGIDVHGITHVINYDLPKFAEDYVHRIGRTGRANNTGIAISFASNMDRHL 355 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 L IE Y G+ + S +P+++ P G R +S Sbjct: 356 LRKIEQYTGNRLEASVIEGFEP----KRPVKMDGPSGGRRDGHKAGGRGGFKS 404 >UniRef50_D2MPZ3 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Bulleidia extructa W1219 RepID=D2MPZ3_9FIRM Length = 425 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 152/413 (36%), Positives = 222/413 (53%), Gaps = 9/413 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F++F L ++++L K + +PIQ +P+ L G D+ AQTGTGKT F Sbjct: 1 MTFNEFNLRKPLLDSLAKASYKKPSPIQEKGIPILLEGSDLIACAQTGTGKTATFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + L + K + RALI+ PTRELA QI + + L+ YGG QL Sbjct: 61 NSL------SKEKNHSIRALILTPTRELATQIFENIKMFGRYMHLRACCVYGGSPAAPQL 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K + SG DILI T GRL+DY I+L I+ +VLDEADRM D+GFI D+R + +++P Sbjct: 115 KAIRSGCDILIATPGRLLDYLAHGKISLRHIEFLVLDEADRMLDMGFIADVRKIVQQIP- 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 N R+ LFSAT+ ++ELA + + N + + +E E+ T I + L Y K ++L Sbjct: 174 -NDRITALFSATMPKEIQELARDILKNPKEVRIEAEKFTASTIDQYLIYTEKSSKKKVLV 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ E + I+F TK + + +L ++ GD Q +RL L F + Sbjct: 233 NLLNTESIKKTIVFTRTKIGADRLEKYLKEKEIACLVIHGDKTQGQRLNALQRFRTNQIR 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 IL+ATDVAARG+ I ++HV N+DLP+D E+YVHRIGRTGRA G SISL C+E L Sbjct: 293 ILIATDVAARGIDIKDISHVINFDLPEDIENYVHRIGRTGRAKQEGVSISLVCKEELNLL 352 Query: 369 PAIETYIGHSIPVSK-YNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 IE+YI IP+ + L + + + R++++S Sbjct: 353 ANIESYIQFQIPLKQNLYSLPLERKKKRKSSIHKTTRKKERFSNQKKRSKKKS 405 >UniRef50_A6VJ89 DEAD/DEAH box helicase domain protein n=5 Tax=Euryarchaeota RepID=A6VJ89_METM7 Length = 546 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 142/398 (35%), Positives = 218/398 (54%), Gaps = 10/398 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAG-RDVAGQAQTGTGKTMAFLTS 66 + F + L ++++ALEKKGF N TPIQ A+P+ + G RDV GQAQTGTGKT AF Sbjct: 1 MESFKNLGLSDEIIKALEKKGFTNPTPIQEQAIPILIEGKRDVVGQAQTGTGKTAAFGIP 60 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 + D +ALI+APTRELA+Q+ + + + + L + YGG D+ Sbjct: 61 ILETI-------DESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDR 113 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q++ L+ GV I++GT GR++D+ + I L + VVLDEAD M ++GFI D+ + + + Sbjct: 114 QIRELKRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSV 173 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 + ++ +LFSATL + +LA M + I+V+ +Q T + + + +K L Sbjct: 174 --STEKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSYYEIHSRDKFEL 231 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L +I+ E +IF TK +EI L G+ L GD+ Q +R + LD+F Sbjct: 232 LSRIIDVEKEFYGLIFCKTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLDKFKARK 291 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 +++LVATDVAARG+ I +THV NYD+P + E YVHRIGRTGRAG G++++ Sbjct: 292 INVLVATDVAARGIDINDLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFR 351 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 I+ I + + K ++ + Sbjct: 352 KFKYIQKIANTEIRKEEVPDVKDIIGAKKRKIVSGIKE 389 >UniRef50_B8ILJ8 DEAD/DEAH box helicase domain protein n=10 Tax=Alphaproteobacteria RepID=B8ILJ8_METNO Length = 506 Score = 579 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 143/413 (34%), Positives = 211/413 (51%), Gaps = 4/413 (0%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 +F DF L +++AL + G+ TPIQA A+P + GRD+ G AQTGTGKT AF Sbjct: 1 MTQFVDFGLAAPIMKALAETGYVTPTPIQAQAVPPAMTGRDLCGIAQTGTGKTAAFALPI 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 H L S R L+++PTRELA QI + + +GG +Q Sbjct: 61 LHRLASETPAKRAPRRGCRVLVLSPTRELASQIADSFRDYGKFLPFSTTVVFGGVTIGRQ 120 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L +G+D+L+ T GRL+D + ++L +++ +VLDEAD+M DLGFI ++ + +P Sbjct: 121 ERALANGIDVLVATPGRLLDLVDRRSLSLDSVEYLVLDEADQMLDLGFIHALKRIVTLLP 180 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R ++ FSAT+ + LA + + + + V P T R+++ + + S K LL Sbjct: 181 --KARQSLFFSATMPKNIATLAAQYLRDPVQVAVTPVATTAERVEQRVIHVSTGAKQALL 238 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 T++ +E DR ++F TKH + + L G + G+ +Q +R R L F G Sbjct: 239 GTILRDESIDRVLVFTRTKHGADRVVRGLEKVGIGSAAIHGNKSQPQRERALAAFRAGTC 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATD+AARG+ + VTHV N+DLP+ E YVHRIGRT RAGA G +IS EE Sbjct: 299 RVLVATDIAARGIDVEGVTHVVNFDLPNVPEAYVHRIGRTARAGADGLAISFCNEEERAY 358 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 L IE +P + RR PR +R Sbjct: 359 LRDIERLTRQKVPEMAIP--VGFVPPSRQEAAEAVAEAERDRRQPGPRGQRPG 409 >UniRef50_C4LJP9 ATP-dependent RNA helicase n=15 Tax=Bacteria RepID=C4LJP9_CORK4 Length = 823 Score = 579 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 141/380 (37%), Positives = 207/380 (54%), Gaps = 10/380 (2%) Query: 22 EALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRK 81 A++K GF +PIQA +P+ GRDV G AQTGTGKT AF L DR Sbjct: 167 RAVKKVGFETPSPIQAATIPILAQGRDVVGLAQTGTGKTAAFALPILSRL-------DRS 219 Query: 82 VNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQLKVLESGVDILIG 140 +P+AL+++PTRELA+Q+ + A+ G + + YGG Y QL L G I++G Sbjct: 220 QKKPQALVLSPTRELALQVADAFQEFADHLGGVHVLPIYGGQSYGIQLSGLRRGAHIVVG 279 Query: 141 TTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSAT 200 T GR+ID+ ++ ++L ++ +VLDEAD M ++GF +D+ + P LFSAT Sbjct: 280 TPGRVIDHLERGSLDLSELKYLVLDEADEMLNMGFQEDVERILADTPEHK--QTALFSAT 337 Query: 201 LSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAI 260 + +R L+ + + + + ++ +Q+T I ++ ++ K+ L ++E D I Sbjct: 338 MPASIRRLSKQYLEDPREVTIKSQQRTADNIHQQYLLVNHHYKLDALTRILEVTEFDAMI 397 Query: 261 IFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL 320 +FA TK EE+ L A G + GD+AQ +R R +D+ G LDILVATDVAARGL Sbjct: 398 MFARTKQNTEELAEKLRARGFSAAAINGDMAQNQRERTVDQLRDGRLDILVATDVAARGL 457 Query: 321 HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIP 380 + ++HV NYD+P D E YVHRIGRTGRAG SG +I L +IE SI Sbjct: 458 DVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRLLRSIERATKSSIE 517 Query: 381 VSKYNPDALMTDLPKPLRLT 400 + + + K Sbjct: 518 EMQLPTVDEVNETRKAKFAQ 537 >UniRef50_P24346 Putative ATP-dependent RNA helicase an3 n=63 Tax=Eukaryota RepID=DDX3_XENLA Length = 697 Score = 579 bits (1494), Expect = e-164, Method: Composition-based stats. Identities = 130/396 (32%), Positives = 199/396 (50%), Gaps = 17/396 (4%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 S + F D + ++ ++ + TP+Q A+P+ + RD+ AQTG+GKT Sbjct: 214 SNCPPHIESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTA 273 Query: 62 AFLTSTFHYLLSHPAIA-----------DRKVNQPRALIMAPTRELAVQIHADAEPLAEA 110 AFL + + R+ P +L++APTRELAVQI+ +A A Sbjct: 274 AFLLPILSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYR 333 Query: 111 TGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRM 170 + ++ + YGG +Q++ LE G +L+ T GRL+D ++ I L + +VLDEADRM Sbjct: 334 SRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRM 393 Query: 171 YDLGFIKDIRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTG 228 D+GF IR + + MPP R M+FSAT ++ LA + ++ ++ V T Sbjct: 394 LDMGFEPQIRRIVEQDTMPPKGVRQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTS 453 Query: 229 HRIKEELFYPSNEEKMRLLQTLIEEEWPDR-AIIFANTKHRCEEIWGHLAADGHRVGLLT 287 I +++ + +K L L+ D ++F TK + + L +G+ + Sbjct: 454 ENITQKVVWVEEMDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIH 513 Query: 288 GDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRT 347 GD +Q+ R L +F G ILVAT VAARGL I V HV N+DLP D E+YVHRIGRT Sbjct: 514 GDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRT 573 Query: 348 GRAGASGHSISLACEEYA---LNLPAIETYIGHSIP 380 GR G G + S E+ +L + +P Sbjct: 574 GRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVP 609 >UniRef50_C4QFR3 DEAD box ATP-dependent RNA helicase, putative n=2 Tax=Schistosoma RepID=C4QFR3_SCHMA Length = 944 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 137/420 (32%), Positives = 211/420 (50%), Gaps = 9/420 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + F+D LH + E + + + + TP+Q ALP+ A RD+ AQTG+GKT A Sbjct: 153 TPVEPIKSFNDVELHQIIKENVTRAQYIHPTPVQKYALPIIAAKRDLMACAQTGSGKTAA 212 Query: 63 FLTSTFHYLLSHPAIADRKVNQ------PRALIMAPTRELAVQIHADAEPLAEATGLKLG 116 FL + L + + P ALI+APTREL+ QI+ +A + + +K Sbjct: 213 FLLPILNMLFEDNHCENSDASALSCAVCPLALILAPTRELSSQIYDEARKFSYRSNIKPC 272 Query: 117 LAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFI 176 + YGG Q++ L G ++L+ T GRL+D + ++L I+ VLDEADRM D+GF Sbjct: 273 VVYGGASILAQIRELSHGCNLLVATPGRLVDMVSRGKVSLEQIRFFVLDEADRMLDMGFE 332 Query: 177 KDIRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEE 234 IR + + MPPA +R ++FSAT ++ LA + +++ ++ V T I +E Sbjct: 333 PQIRRIVEQHGMPPAGKRQTLMFSATFPKEIQTLARDFLHSYIFLAVGRVGSTNENIIQE 392 Query: 235 LFYPSNEEKMRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQK 293 + ++++K +L L++ + PD A++F TK + + L V + GD Q Sbjct: 393 VLNVADKDKPDMLVRLLQGKDPDGLALVFVETKRGADVLAKFLCQLNFPVTSIHGDRPQT 452 Query: 294 KRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGAS 353 +R L F G IL+AT VAARGL IP V HV N+DLP D E+YVHRIGRTGR G Sbjct: 453 EREHALQSFRSGRTPILIATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRMGQP 512 Query: 354 GHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGA 413 G + S E+ + + + S +A + P + + Sbjct: 513 GSATSFFSEKNQNVVRDLVELLRESKQAVPPWLEARVAYPSGPASRRNKNINSNVNKKNR 572 >UniRef50_Q5CQW8 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc) n=4 Tax=Apicomplexa RepID=Q5CQW8_CRYPV Length = 702 Score = 577 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 139/429 (32%), Positives = 216/429 (50%), Gaps = 16/429 (3%) Query: 2 SKTHLTEQKFSDF-ALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 + Q F + +H +++ + + + TP+Q ++P L GRD+ AQTG+GKT Sbjct: 193 TNKIKPMQSFMELEGIHEILLDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQTGSGKT 252 Query: 61 MAFLTSTFHYLLSHPAIADR--------KVNQPRALIMAPTRELAVQIHADAEPLAEATG 112 AFL +L+ ++ P AL+++PTRELA+Q + ++ TG Sbjct: 253 AAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRKFCFGTG 312 Query: 113 LKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYD 172 ++ + YGG Q+ L+ G DI++ T GRL D + +NL I+ ++LDEADRM D Sbjct: 313 IRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLD 372 Query: 173 LGFIKDIRWLF--RRMPPANQ-RLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGH 229 +GF IR + MP + R ++FSAT +++LA + ++N ++ V T Sbjct: 373 MGFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATSG 432 Query: 230 RIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGD 289 I + + Y + K RLL L+ E+ ++F K R ++I L + GD Sbjct: 433 SIVQRVVYAEEDHKPRLLVKLLLEQGEGLTVVFVEMKRRADQIEDFLIDQNFPAVSIHGD 492 Query: 290 VAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGR 349 +Q++R L F G ILVATDVAARGL IP +THV N D+P + +DYVHRIGRTGR Sbjct: 493 RSQQEREHALRLFRSGQRPILVATDVAARGLDIPNITHVINLDMPCNIDDYVHRIGRTGR 552 Query: 350 AGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPR 409 AG +G + S E L + + S + D+ K + R GN Sbjct: 553 AGNTGLATSFVNESNKPILRDLLAAL----EESGQDAPEWFQDMVKSCTASFGRYGNRFN 608 Query: 410 RTGAPRNRR 418 + G ++R Sbjct: 609 KGGVSSSQR 617 >UniRef50_A8SKI7 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKI7_9FIRM Length = 580 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 128/393 (32%), Positives = 212/393 (53%), Gaps = 9/393 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F+DF L +V++A+ + GF +PIQ A+P L D+ GQAQTGTGKT +F Sbjct: 2 IENFNDFNLSKEVLKAVVEMGFEEPSPIQKQAIPTMLNNEDIIGQAQTGTGKTASFGIPI 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + ++ +A+++ PTREL++Q+ + LA+ G+ + YGG ++Q Sbjct: 62 VEKV-------NKNSKTTQAMVLCPTRELSIQVAEEISKLAKYKGVTVVPIYGGQPIERQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L+ GV +++GT GR+ID+ K+ + I+ VLDEAD M+D+GF +DI + +P Sbjct: 115 IRSLKMGVQVIVGTPGRVIDHIKRKTLKTENIKTFVLDEADEMFDMGFREDIEKIIGFLP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R FSAT+ + + + A + I+V P++ T ++ + F + K+ +L Sbjct: 175 --YERQTTFFSATMDHEMMDFAARYQSEPRLIKVVPKELTVPKVTQYYFALKHNMKLEIL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +++ + P ++F NTK +++ L + G+ L GD+ Q +R ++++F + Sbjct: 233 SRILDVQNPKLTVVFCNTKKMVDDLTAGLQSRGYFADGLHGDLKQIQRDGVMNKFRNSTI 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 DILVATDVAARG+ + V V NYD+P D E YVHRIGRT RAG G +IS Sbjct: 293 DILVATDVAARGIDVDDVDLVINYDMPQDVEYYVHRIGRTARAGREGTAISFVSPREMNT 352 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 L I+ Y I + + + Sbjct: 353 LSQIQKYTKTKIEKRDMPTLKDLIKRHEERFME 385 >UniRef50_Q9M2F9 DEAD-box ATP-dependent RNA helicase 52 n=13 Tax=Eukaryota RepID=RH52_ARATH Length = 646 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 138/393 (35%), Positives = 212/393 (53%), Gaps = 15/393 (3%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F++ L + +++ + TP+Q A+P+ AGRD+ AQTG+GKT A Sbjct: 140 NVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAA 199 Query: 63 FLTSTFHYLLSHPAIADRKVNQ---PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAY 119 F ++ I + + P A+I++PTRELA QIH +A + TG+K+ +AY Sbjct: 200 FCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAY 259 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG ++Q++ LE GVDIL+ T GRL D ++ ++L ++ + LDEADRM D+GF I Sbjct: 260 GGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQI 319 Query: 180 RWLFRRM--PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFY 237 R + ++M PP R MLFSAT ++ LA + ++N ++ V + I + + + Sbjct: 320 RKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEF 379 Query: 238 PSNEEKMRLLQTLI--EEEWPDR-----AIIFANTKHRCEEIWGHLAADGHRVGLLTGDV 290 + +K L L+ + E ++ ++F TK + + L +G + GD Sbjct: 380 VHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDR 439 Query: 291 AQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRA 350 +Q++R L F G ILVATDVAARGL IP V HV N+DLP+D +DYVHRIGRTGRA Sbjct: 440 SQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRA 499 Query: 351 GASGHSISLACEEY---ALNLPAIETYIGHSIP 380 G SG + + + A L + +P Sbjct: 500 GNSGLATAFFNDNNTTMAKPLAELMQEANQEVP 532 >UniRef50_C6XMJ7 DEAD/DEAH box helicase domain protein n=23 Tax=Bacteria RepID=C6XMJ7_HIRBI Length = 769 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 149/379 (39%), Positives = 218/379 (57%), Gaps = 4/379 (1%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 KFSDF L V++AL+K+G+ TPIQA A+PL + G D+ G AQTGTGKT AF Sbjct: 1 MTKFSDFDLASPVLKALDKEGYETPTPIQAQAIPLVMEGGDILGIAQTGTGKTAAFALPL 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 H+L P + R L++APTRELA QI + L++ +GG KQ Sbjct: 61 LHHLCKLPDM--PGPGAVRCLVIAPTRELASQIAEAFSKYGQCLSLRVLKVFGGVPIRKQ 118 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L G D+L+ T GRLID +Q ++L ++ +VLDEAD+M DLGFI +R + +P Sbjct: 119 MRDLHRGADVLVATPGRLIDLMEQGAVDLSYVEKLVLDEADQMLDLGFIHPLRRIAAAVP 178 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R + FSAT+ V LA + + N + + + E T R+ + + + + +K LL Sbjct: 179 --KERQTLFFSATMPSNVSGLANQFLTNPKKVSIAQESTTAERVTQTMSHVNQAQKGPLL 236 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +++E DRA++F TKH +++ L G R G + G+ +Q +R R L+ F GD Sbjct: 237 LVNLQDESIDRALVFTRTKHGADKVVSKLMNAGIRCGAIHGNKSQAQRERALNAFRNGDS 296 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATD+AARG+ +P V+HVFNY++P+ E YVHRIGRT RAG G +IS + Sbjct: 297 KVLVATDIAARGIDVPGVSHVFNYEIPNVPEQYVHRIGRTARAGREGKAISFVSRDEKKY 356 Query: 368 LPAIETYIGHSIPVSKYNP 386 L I+ I IP+ Sbjct: 357 LLDIQRQIRMKIPIVDLPE 375 >UniRef50_B9SM44 Dead box ATP-dependent RNA helicase, putative n=2 Tax=Magnoliophyta RepID=B9SM44_RICCO Length = 650 Score = 576 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 137/398 (34%), Positives = 209/398 (52%), Gaps = 18/398 (4%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 F++ L + + + + TP+Q A+P++L GRD+ AQTG+GKT Sbjct: 181 ENVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTA 240 Query: 62 AFLTSTFHYLLS------HPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKL 115 AF ++ + ++ P ALI++PTREL++QIH +A + TG+K+ Sbjct: 241 AFCFPIISGIMKMQGQSAQRPLRGARMVYPLALILSPTRELSMQIHEEARKFSYQTGVKV 300 Query: 116 GLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 175 +AYGG ++QL+ LE GVDIL+ T GRL+D ++ ++L ++ + LDEADRM D+GF Sbjct: 301 VVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMVRYLALDEADRMLDMGF 360 Query: 176 IKDIRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKE 233 IR + + MP R MLFSAT ++ LA + + N ++ V + I + Sbjct: 361 EPQIRKIVEQNDMPRPGARQTMLFSATFPKEIQRLATDFLFNYIFLAVGRVGSSTDLIIQ 420 Query: 234 ELFYPSNEEKMRLLQTLIEEE-------WPDRAIIFANTKHRCEEIWGHLAADGHRVGLL 286 + + +K L L+ + ++F TK + + L +G + Sbjct: 421 RVEFVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLYVNGFPATSI 480 Query: 287 TGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGR 346 GD +Q++R + L F G+ ILVATDVAARGL IP V HV N+DLP+D +DYVHRIGR Sbjct: 481 HGDRSQQEREQALRSFRSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 540 Query: 347 TGRAGASGHSISLACEEYALN---LPAIETYIGHSIPV 381 TGRAG SG + + E A L + +P Sbjct: 541 TGRAGKSGLATAFFNEGNASLAMALADLMQESNQEVPA 578 >UniRef50_B7PA03 ATP-dependent helicase (DEAD box), putative n=1 Tax=Ixodes scapularis RepID=B7PA03_IXOSC Length = 685 Score = 576 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 128/415 (30%), Positives = 201/415 (48%), Gaps = 36/415 (8%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F + ++ +E + + T IQ+ P+ L+GRD+ G AQTG+GKT+A Sbjct: 109 DVPRPILTFQEGCFPDYCMKMIETQNYTTPTAIQSQGWPIALSGRDMVGIAQTGSGKTLA 168 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 ++ ++ P + ++ + P AL++APTRELA QI A +A+ ++ +GG Sbjct: 169 YILPAIVHITHQPYL--QRGDGPMALVLAPTRELAQQIQQVAADFGKASRIRNTCVFGGA 226 Query: 123 GYDKQLK------VL-------------------ESGVDILIGTTGRLIDYAKQNHINLG 157 QL+ L +GV+I I T GRLID+ + +NL Sbjct: 227 PKGSQLRDWREFGALCPASVAVVQRNSQVIVVICRAGVEICIATPGRLIDFLEAGKVNLR 286 Query: 158 AIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAE 217 +VLDEADRM D+GF IR + ++ P +++SAT VR LA + + + Sbjct: 287 RCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDC--QTLMWSATWPKEVRSLAEDFLKDYI 344 Query: 218 YIEVEPEQK-TGHRIKEELFYPSNEEKMRLLQTL---IEEEWPDRAIIFANTKHRCEEIW 273 + + Q HRI + + +K L L I E ++ +IFA TK + +E+ Sbjct: 345 QVNIGALQLCANHRIVQIVDVCQESDKENKLMELHKEIINEQDNKTLIFAETKKKVDELT 404 Query: 274 GHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDL 333 + +G + GD +Q +R +L+EF G ILVATDVAARGL + + V NYD Sbjct: 405 RRMRRNGWPSICIHGDKSQSERDWVLNEFRSGRSPILVATDVAARGLDVDDIRFVINYDY 464 Query: 334 PDDCEDYVHRIGRTGRAGASGHSISLACE---EYALNLPAIETYIGHSIPVSKYN 385 P EDY+HRIGRT R+ +G + + + A L A+ +I + Sbjct: 465 PHCSEDYIHRIGRTARSNKTGTAYTFFTPGNMKQAKELIAVLKEANQAINPKLFE 519 >UniRef50_B7P029 Vasa n=9 Tax=Coelomata RepID=B7P029_9BIVA Length = 801 Score = 576 bits (1485), Expect = e-163, Method: Composition-based stats. Identities = 138/425 (32%), Positives = 218/425 (51%), Gaps = 10/425 (2%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + + F + ++ + L K F TP+Q ++P+ ++GRD+ AQTG+GKT AFL Sbjct: 348 PASIKSFEEAGIYDGFMTNLVKAHFEKPTPVQKYSIPIVMSGRDLMACAQTGSGKTAAFL 407 Query: 65 TSTFHYLLSHPAIADRKVN--QPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 ++ + + +P+AL++APTRELA+QI DA + T L+ + YGG Sbjct: 408 LPVLTGMMKNGLTGSAFSDVQEPQALVVAPTRELALQIFNDARKFSHGTMLRPVVLYGGT 467 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 QLK +E+G I++GT GRLID + I+L ++ ++LDEADRM D+GF DI+ + Sbjct: 468 SVGYQLKQVENGAHIVVGTPGRLIDVINKGKISLAKLKYLILDEADRMLDMGFGPDIKKI 527 Query: 183 FRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 P +R ++FSAT +++LA + +N+ ++ V + + F Sbjct: 528 VHELGTPEKTERQTLMFSATFPEEIQKLAGDFLNDYLFLTVGRVGGACSDVTQHFFQVDR 587 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 ++K + L ++ E D+ ++F K + + +L+ G + GD Q++R L Sbjct: 588 QQKRQKLCDILSESGADKTLVFVEQKRNADFLASYLSESGFPTTSIHGDRLQREREEALR 647 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F +G IL+AT VAARGL IP V HV NYDLP ++YVHRIGRTGR G G + S Sbjct: 648 DFKQGKAPILIATSVAARGLDIPNVKHVINYDLPQSIDEYVHRIGRTGRCGNLGKATSFF 707 Query: 361 CEEY----ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 E+ A L I +IP + + + + R G R R Sbjct: 708 SEDGDGSLAKPLMRILVDAQQNIP--DWLEASGQSSMSSGSYSGGGRFGGRDIRKDQERT 765 Query: 417 RRRSG 421 R +G Sbjct: 766 REHAG 770 >UniRef50_C9RPH4 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RPH4_FIBSS Length = 486 Score = 575 bits (1484), Expect = e-163, Method: Composition-based stats. Identities = 149/420 (35%), Positives = 212/420 (50%), Gaps = 11/420 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF + L + A+ G+ TPIQ ++P L G+D+ G AQTGTGKT AF Sbjct: 1 MKFEELPLANPLQRAVRAVGYETPTPIQERSIPSLLEGKDLLGIAQTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LL R RALI+ PTRELA+Q+ A+ T + +GG + Q Sbjct: 61 QRLLDSGKF--RSPKTCRALILLPTRELAIQVEDCFREYAQFTAISTACIFGGVNDNPQK 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVD+L+ T GRL+D Q I+L ++ VLDEADRM D+GFI DIR + +P Sbjct: 119 QKLIRGVDVLVATPGRLLDLIGQKAISLKKLEFFVLDEADRMLDMGFIHDIRKVVAMLPQ 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R N+ FSAT+ + +LA + N +EV P+ RI++EL+ K LL Sbjct: 179 D--RQNLFFSATMPEEISKLAATILRPNPVRVEVAPQSTPIERIRQELYRIDKRRKGALL 236 Query: 248 QTLIEEE-WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 + L+ E + ++F TKH ++I L G + + G+ +Q +R L F Sbjct: 237 KELLAEHPEMKKVLVFCRTKHGADKIVRVLEKAGIKCAAIHGNKSQNRRQEALGNFKCEQ 296 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + +LVATD+AARG+ + V+HVFNYDLP++ E +VHRIGRT RAG G +IS + Sbjct: 297 IRVLVATDIAARGIDVDDVSHVFNYDLPNEHETFVHRIGRTARAGKEGVAISFCSPDEES 356 Query: 367 NLPAIETYIGHSIPVSKYN-----PDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 +L IE IP + P +R +R R + A R G Sbjct: 357 DLRGIEKLTRVKIPEGDQSIYENLPPPQKETAESMMRNSRGRMSREEAQARAAETRNNRG 416 >UniRef50_Q1AG34 Ded1-like DEAD-box RNA helicase n=3 Tax=Coelomata RepID=Q1AG34_CHITE Length = 776 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 139/419 (33%), Positives = 207/419 (49%), Gaps = 21/419 (5%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 + F D L + ++ + TP+Q A+P+ L+GRD+ AQTG+GKT Sbjct: 260 QQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMSCAQTGSGKTA 319 Query: 62 AFLTSTFHYLLSHPA--------IADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGL 113 AFL + +L A R+ P L++APTRELA QI+ +A+ + + + Sbjct: 320 AFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIYEEAKKFSYRSRM 379 Query: 114 KLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDL 173 + + YGG+ +Q++ L+ G +++ T GRL D + I L ++ +VLDEADRM D+ Sbjct: 380 RPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLDEADRMLDM 439 Query: 174 GFIKDIRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRI 231 GF IR + MPP QR ++FSAT ++ELA + ++N ++ V T I Sbjct: 440 GFEPQIRHIIENRDMPPTGQRQTLMFSATFPKNIQELASDFLSNYIFLAVGRVGSTSENI 499 Query: 232 KEELFYPSNEEKMRLLQTLIEEEWPDR--------AIIFANTKHRCEEIWGHLAADGHRV 283 + + + + EK L L+ +IF TK + + L + H V Sbjct: 500 TQTILWVNENEKRSYLLDLLSRLREGSPDYSPDSLTLIFVETKKGADALEEFLYQNKHPV 559 Query: 284 GLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHR 343 + GD +Q++R L F GD ILVAT VAARGL IP V HV NYDLP D E+YVHR Sbjct: 560 TSIHGDRSQREREDALKCFRSGDCPILVATAVAARGLDIPHVKHVINYDLPSDVEEYVHR 619 Query: 344 IGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402 IGRTGR G G + S E+ + + + I ++ P L R Sbjct: 620 IGRTGRMGNLGIATSFFNEKNRNIVSDLVELL---IETNQELPSFLEEMANDRYGGPRR 675 >UniRef50_C1IBN1 DEAD-box ATP dependent DNA helicase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBN1_9CLOT Length = 526 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 141/382 (36%), Positives = 224/382 (58%), Gaps = 11/382 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + E KFS+ L +++++ GF + IQA A+P+ + G D+ GQAQTGTGKT AF Sbjct: 1 MNEIKFSNLGLKDTLLKSINDLGFEKPSQIQAEAIPVAIQGYDLIGQAQTGTGKTAAFGC 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 +++ ++ A+I+APTRELA+Q++ + + L++ L + YGGD Sbjct: 61 GIINHISKKSGLS--------AIILAPTRELAIQVNDELKRLSKYDDLTILPVYGGDPIT 112 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L+ V+I++GT GR++D+ K+ I L I+ +VLDEAD M ++GFI D+ + ++ Sbjct: 113 NQIRALKRNVNIVVGTPGRVLDHIKRGTIKLDQIKFLVLDEADEMLNMGFIDDLEDIIKQ 172 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P ++R +LFSAT+ ++R+LA M +A++I ++ T I + F S++ + Sbjct: 173 LP--SERQTLLFSATMPDQIRKLAKRYMKPDAKHISIKKTSMTVSTISQNFFEVSHKTRF 230 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L +++ + P AIIF TK +E+ + + G+ V + GD++Q RLR L +F Sbjct: 231 EALCRVLDFDTPSSAIIFCRTKKGVDELVEGMQSRGYVVEGMHGDMSQAHRLRTLKKFKE 290 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G L+ LVATDVAARG+ + +THV NYDLP D E YVHRIGRTGRA G + SL + Sbjct: 291 GSLNYLVATDVAARGIDVEGITHVINYDLPQDVESYVHRIGRTGRANREGIAYSLVSPKE 350 Query: 365 ALNLPAIETYIGHSIPVSKYNP 386 L I++ I Sbjct: 351 YSMLKQIKSVTKSDISRKNIPT 372 >UniRef50_D2NRF7 Superfamily II DNA and RNA helicase n=3 Tax=Bacteria RepID=D2NRF7_9MICC Length = 732 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 200/400 (50%), Gaps = 4/400 (1%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 K +F+D L +V+ ALE+ G+ +PIQ +PL L G DV G AQTGTGKT A Sbjct: 55 KAEEEGVRFTDLGLDARVLAALEEVGYEKPSPIQEQTIPLLLEGHDVVGLAQTGTGKTAA 114 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGG 121 F + I + + L++APTRELA+Q+ A + YGG Sbjct: 115 FALPALSRMAELADINGVSRD-TQVLVLAPTRELALQVAEAFSSYATHMEDFTVLPIYGG 173 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y QL L G +++GT GR+ID+ ++ ++L +Q +VLDEAD M +GF +D+ Sbjct: 174 SPYGPQLAGLRRGAQVVVGTPGRVIDHLEKGSLDLSNLQYLVLDEADEMLRMGFAEDVEK 233 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + P + LFSAT+ +R++A + +N+ + V+ + T I + + Sbjct: 234 ILEGTPDSK--QVALFSATMPNSIRKIAQQYLNDPREVRVKAKTTTSSNISQRYMQVMHS 291 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K+ + ++E E D I+F TK EE+ L A G + GD+ Q+ R R +D Sbjct: 292 HKLDAMTRVLEVENYDGIIVFVRTKKETEEVADKLKARGFAAAAINGDIPQQLRERTVDA 351 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 G +DILVATDVAARGL + ++ V NYD+P D E YVHRIGRTGRAG G +I Sbjct: 352 LRDGRIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILFVT 411 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE + + + K + Sbjct: 412 PREKYMLRQIEKATRQKVEPMHMPTAEAVNETRKQRFAQQ 451 >UniRef50_C5EJJ1 DEAD/DEAH box helicase domain-containing protein n=7 Tax=cellular organisms RepID=C5EJJ1_9FIRM Length = 572 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 136/390 (34%), Positives = 221/390 (56%), Gaps = 10/390 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + KF + L +++ A+ + GF +PIQA A+P+ + GRD+ GQAQTGTGKT AF Sbjct: 1 METVKFDELQLDERIIRAITEMGFEEASPIQAQAIPVAMEGRDMIGQAQTGTGKTAAFGI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGY 124 + D KV + +A+I+ PTRELA+Q+ + LA+ G K+ YGG Sbjct: 61 PLLQKV-------DPKVKKLQAIILLPTRELAIQVAEEMRRLAKFMHGTKVLPIYGGQDI 113 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 KQ++ L+ G I++GT GR++D+ ++ + + + VVLDEAD M ++GF++D+ + Sbjct: 114 VKQIRSLKDGTQIVVGTPGRVMDHMRRKTVKMDHVHTVVLDEADEMLNMGFLEDMETILS 173 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 ++P +R ++FSAT+ + ++A + ++ + V ++ T ++ + + + K+ Sbjct: 174 QLPE--ERQTLMFSATMPQAIADIARKFQDDPVTVRVIKKELTVPKVTQYYYEVKPKNKV 231 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 ++ L++ P +I+F NTK + +E+ L G+ L GD+ Q +R R++ F Sbjct: 232 EVMCRLLDMYAPKLSIVFCNTKRQVDELVQALQGRGYFAEGLHGDLKQVQRDRVMGSFRN 291 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G DILVATDVAARG+ + V VFNYD+P D E YVHRIGRTGRAG G + SL + Sbjct: 292 GRTDILVATDVAARGIDVGDVEAVFNYDVPQDDEYYVHRIGRTGRAGREGKAFSLVVGKE 351 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLP 394 L I+ Y I +T++ Sbjct: 352 VYKLRDIQRYCKTKIIPQAIPSLNDITEIK 381 >UniRef50_P19109 ATP-dependent RNA helicase p62 n=11 Tax=Eukaryota RepID=DDX17_DROME Length = 719 Score = 574 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 128/389 (32%), Positives = 206/389 (52%), Gaps = 13/389 (3%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + Q FS+ L V++ + ++G+ T IQA P+ ++G + G A+TG+GKT+ Sbjct: 275 QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLG 334 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 ++ ++ + + ++ + P AL++APTRELA QI A ++ ++ +GG Sbjct: 335 YILPAIVHINNQQPL--QRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGA 392 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q++ L+ G +I+I T GRLID+ NL +VLDEADRM D+GF IR + Sbjct: 393 PKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKI 452 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNE 241 ++ P R +++SAT V++LA + + N I + E H I++ + Sbjct: 453 VSQIRPD--RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEF 510 Query: 242 EKMRLLQTLIEE-----EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 K L+TL+ + E P + IIF TK R + + + + G R G + GD +Q +R Sbjct: 511 SKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERD 570 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 +L EF G +ILVATDVAARGL + + +V N+D P + EDY+HRIGRTGR+ G S Sbjct: 571 FVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTS 630 Query: 357 ISLACE---EYALNLPAIETYIGHSIPVS 382 + + + A L + I + Sbjct: 631 FAFFTKNNAKQAKALVDVLREANQEINPA 659 >UniRef50_A9KIB7 DEAD/DEAH box helicase domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIB7_CLOPH Length = 514 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 152/401 (37%), Positives = 224/401 (55%), Gaps = 9/401 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F++ L +++A++++GF +PIQ +PL L GRD+ G AQTGTGKT AF Sbjct: 1 MNFNEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVLEGRDILGCAQTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + + RALI+ PTRELA+QI+ E + T LK + YGG G Q+ Sbjct: 61 QSLSKG------EGSGVRALIITPTRELAIQIYESFECFGKYTSLKQSVIYGGVGQSLQV 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L++G+DILI T GRL D Q +I L AI++ VLDEAD+M D+GF+ DI+ + + +P Sbjct: 115 NSLKAGIDILIATPGRLNDLIGQGYITLDAIEMFVLDEADQMLDMGFLNDIKKVIKLLPK 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R +LFSAT+ + LA +NN E I++ P T I++ +++ K+ LL Sbjct: 175 T--RQTLLFSATMPKEIESLATNLLNNPEIIKISPVTSTVDSIEQSVYFVDRLNKISLLT 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +LI+E R ++F TKH + + L + + G Q R L +F G + Sbjct: 233 SLIKEHKMSRVLVFTKTKHGADRVADKLNKAKVKTQAIHGGKGQNARQTALSDFKEGKIK 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ I +++V NYD+P+ E Y+HRIGRTGRAG G++I+L + L Sbjct: 293 VLVATDIAARGIDISELSYVVNYDIPNQAEIYIHRIGRTGRAGLGGNAINLCNIDDMDYL 352 Query: 369 PAIETYIGHSIPVSKYN-PDALMTDLPKPLRLTRPRTGNGP 408 IE +IG IP P ++ KP+R RP Sbjct: 353 REIEKHIGMVIPEVPSKWPMLILEKTEKPVRGQRPENTTKN 393 >UniRef50_D1I3Q7 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1I3Q7_VITVI Length = 916 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 141/392 (35%), Positives = 212/392 (54%), Gaps = 13/392 (3%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 S F++ L + + + + + TPIQ A+P+ +AGRD+ AQTG+GKT Sbjct: 414 SDIPPPVSAFAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTA 473 Query: 62 AFLTSTFHYLL-SHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AF +L + + ++ P ALI++PTREL+ QIH +A+ + TGLK+ +AYG Sbjct: 474 AFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYG 533 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G +Q + LE GVDIL+ T GRL+D ++ ++L I+ + LDEADRM D+GF IR Sbjct: 534 GAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQIR 593 Query: 181 WLFRRM--PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP 238 + +M PP R MLFSAT ++ LA + ++N ++ V + I + + + Sbjct: 594 KIVEQMDMPPPGARQTMLFSATFPNEIQRLAADFLSNYIFLSVGRVGSSTDLIVQRVEFV 653 Query: 239 SNEEKMRLLQTLIEEEWPDRA-------IIFANTKHRCEEIWGHLAADGHRVGLLTGDVA 291 + +K L L++ + +R ++F TK + + L +G + GD Sbjct: 654 EDTDKRYHLMDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKV 713 Query: 292 QKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAG 351 Q +R R L F G I+VATDVAARGL IP V HV N+DLP +DYVHRIGRTGRAG Sbjct: 714 QMERERALKSFKSGATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDYVHRIGRTGRAG 773 Query: 352 ASGHSISLACEEY---ALNLPAIETYIGHSIP 380 SG + + + A +L + +P Sbjct: 774 KSGLATAFFNDGNLSLAKSLVELMQESNQEVP 805 >UniRef50_B0SEU1 Superfamily II DNA and RNA helicase n=5 Tax=cellular organisms RepID=B0SEU1_LEPBA Length = 471 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 151/398 (37%), Positives = 220/398 (55%), Gaps = 4/398 (1%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + FSD L + +A+ + G+ TPIQ A+PL L D+ G AQTGTGKT AF Sbjct: 1 MQKQIETFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCAQTGTGKTAAF 60 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 H L+S A QPR+L++ PTRELA+Q+H + T ++ + +GG G Sbjct: 61 ALPMIHNLISTRA--KPNPKQPRSLVLVPTRELAIQVHESFVLYGKYTQIRTAVIFGGVG 118 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 + Q K + SG+D+LI T GRL+D QN ++L +++ VLDEADRM D+GFI DIR + Sbjct: 119 QNPQAKAIASGLDVLIATPGRLVDLMNQNLVSLKNLEIFVLDEADRMLDMGFIHDIRKII 178 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 +P +R N+ FSAT+ + +LA + I+V P T I + + Y +K Sbjct: 179 SYLP--KRRQNLFFSATMPPEIEKLANSILVEPIRIDVTPVSSTVELISQSVMYTELADK 236 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 LL L +++ + IIF TKH +I L G + ++ G+ +Q R R L++F Sbjct: 237 KNLLLHLFKDKNFKKTIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFR 296 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G LVATD+AARG+ I +THV NY++P E YVHRIGRT RAG +G +I++A + Sbjct: 297 SGKNRALVATDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAIAIAEAD 356 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 + IE IG SIPV + +P + + Sbjct: 357 ERSLIKDIEKVIGISIPVDRDHPYHAARVESHTGKAPK 394 >UniRef50_A7IK90 DEAD/DEAH box helicase domain protein n=36 Tax=Alphaproteobacteria RepID=A7IK90_XANP2 Length = 559 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 156/432 (36%), Positives = 230/432 (53%), Gaps = 18/432 (4%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + FS+ L +V AL + TPIQA A+P LAGRD+ G AQTGTGKT AF Sbjct: 32 ESQSLTSFSNLGLAEPIVRALTEAQHVTPTPIQAEAIPQILAGRDLIGIAQTGTGKTAAF 91 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 L+ HP + RAL+++PTREL+ QI + E + + LA GG Sbjct: 92 ALPILDRLVRHPH--RPEPKSVRALVLSPTRELSGQIVENFEKFGRHANISVSLAIGGVP 149 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 +Q++ L GVD+L+ T GRLID + + + L ++V+VLDEAD+M D+GF+ IR + Sbjct: 150 MGRQIRALSRGVDVLVATPGRLIDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIV 209 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 RR+P ++R ++ FSAT+ + + ELA + + + V P KT R+++ + K Sbjct: 210 RRLP--HKRHSLFFSATMPHAIAELAGSMLRDPVRVAVTPVAKTADRVEQRVILVDKANK 267 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 +LL ++ E DRA++F+ TKH +++ LA G + G+ +Q +R R+L F Sbjct: 268 GQLLAEVLSTEDIDRALVFSRTKHGADKVVRVLAKAGIAAEAIHGNKSQNQRDRVLAAFR 327 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G + L+ATD+AARG+ + V+HV N+DLP+ E YVHRIGRT RAG G +IS E Sbjct: 328 EGKIRTLIATDIAARGIDVTGVSHVINFDLPNVPESYVHRIGRTARAGREGIAISFCDHE 387 Query: 364 YALNLPAIETYIGHSIPVSK---------YNPDALMTDLPKPLRLTR----PRTGNGPRR 410 L +IE I +P S + + R R+G R Sbjct: 388 ERAFLRSIEKLIKMQLPSSDRRGAGTRFAVPELEPIILDERDETSERSDYIGRSGRQNPR 447 Query: 411 TGAPRNR-RRSG 421 PR+ RSG Sbjct: 448 GQRPRHGDERSG 459 >UniRef50_Q24I45 DEAD/DEAH box helicase family protein n=2 Tax=Tetrahymena thermophila RepID=Q24I45_TETTH Length = 713 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 139/422 (32%), Positives = 223/422 (52%), Gaps = 11/422 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 K ++D ++ + F +PIQ+LA P+ L+G D+ G A+TG+GKT++ Sbjct: 95 KVPDPFLSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLS 154 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL + ++ + P + +K + P L++APTRELA+QI ++E +++ LK YGG Sbjct: 155 FLLPSIVHINAQPTV--KKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCACIYGGA 212 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q +L+ GVD++I T GRLID+ + L + +VLDEADRM D+GF IR + Sbjct: 213 DKYSQRALLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKI 272 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNN-AEYIEVEPEQKT-GHRIKEELFYPSN 240 ++ P R ++FSAT V+ LA + N Y+++ + RIK+ ++ Sbjct: 273 LGQIRPD--RQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVTDQ 330 Query: 241 EEKMRLLQTLIE-EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K+ L ++ D+ +IFA TK CE + L +G + + GD AQK R ++ Sbjct: 331 SKKINQLIKQLDCLTQKDKVLIFAQTKKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVM 390 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 ++F G+ IL+ATDVA+RGL + V+HVFNYD P EDYVHRIGRTGRAGA G ++S Sbjct: 391 NKFKSGECRILIATDVASRGLDVKDVSHVFNYDFPKVMEDYVHRIGRTGRAGAYGCAVSF 450 Query: 360 ACEEYALNLPA----IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 E + + IP+ + ++ + + + A Sbjct: 451 LTFEDDKKISREYVQMLHDAKQEIPIDLLDLASINPRYRTQYKTVSSSYYDIKKFNSADT 510 Query: 416 NR 417 ++ Sbjct: 511 SK 512 >UniRef50_C1D673 RhlE3 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D673_LARHH Length = 582 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 154/414 (37%), Positives = 220/414 (53%), Gaps = 4/414 (0%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ F+D L ++ A+ + G+ TPIQ A+ LAGRD+ AQTGTGKT F Sbjct: 1 MSSISFADLQLVDPLLRAITEAGYTEPTPIQREAIAPVLAGRDLMAAAQTGTGKTAGFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L + PR L++ PTRELA Q+ L L + +GG Sbjct: 61 PLLQRLAATHPHPHPAGR-PRGLVLTPTRELAAQVGESIATLGTHLPLTSLVIFGGVRVK 119 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L VDILI T GRLID AKQ ++L ++++VLDEADRM D+GFI+D+R + + Sbjct: 120 PQIEALTQRVDILIATPGRLIDLAKQEAVDLSGVEILVLDEADRMLDMGFIRDVRKVLKL 179 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P +R N+LFSAT + ++ LA +++ + +EV P T + + K Sbjct: 180 LPA--ERQNLLFSATFNDDIKALADTFLHDPQLVEVSPPNSTTELVTHHVHLVDRNRKRE 237 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL L+E + ++F TKH + LA G + G+ +Q R R L EF G Sbjct: 238 LLTHLVESRQWQQVLVFTRTKHGANRLAEVLAKGGIPAAAIHGNKSQGARTRALSEFKDG 297 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 L +LVATD+AARG+ I + V NY+LP+ EDYVHRIGRTGRAG+ G ++SL C + Sbjct: 298 SLRVLVATDIAARGIDISELPQVVNYELPNVPEDYVHRIGRTGRAGSPGEAVSLVCVDEL 357 Query: 366 LNLPAIETYIGHSIPVSKYNPDAL-MTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 L IE +IG IP ++ P+PL R + G G PR +R Sbjct: 358 KLLADIEAFIGRPIPQFTEPGFEADLSVPPQPLLPPRHQQGRQDGEGGEPRGQR 411 >UniRef50_C5TNR4 Dead/deah box helicase n=8 Tax=Neisseriaceae RepID=C5TNR4_NEIFL Length = 487 Score = 572 bits (1477), Expect = e-162, Method: Composition-based stats. Identities = 160/421 (38%), Positives = 229/421 (54%), Gaps = 6/421 (1%) Query: 2 SKTHLTEQK-FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 S+ T FS L ++V AL +G+ N TPIQA A+P LAG D+ AQTGTGKT Sbjct: 18 SEQKATIMNPFSSLGLGSELVSALTDQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKT 77 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAY 119 AF+ + L + + P R L++ PTRELA QI + + + L+ + + Sbjct: 78 AAFMLPSLELLKRYATSSTSPAMHPVRMLVLTPTRELADQIDQNVQAYIKNLPLRHTVLF 137 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG DKQ L +G +I++ T GRL+D+ KQ +INL +++VVLDEADRM D+GFI DI Sbjct: 138 GGVNMDKQTADLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDI 197 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R + + +P QR +LFSAT S +R+LA + M+ E +EV + T +++ + Sbjct: 198 RKIMQMLP--KQRQTLLFSATFSPPIRKLAQDFMHTPEMVEVAAQNTTNANVEQHIIAVD 255 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K LL+ LI + ++ I+F TK +++ L + GD +Q+ RL L Sbjct: 256 ALKKRSLLERLIVDLHMNQVIVFCKTKQSVDQVTRDLVRRNIAAQSIHGDKSQQSRLETL 315 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F G L +LVATDVAARGL I + V NY+LP EDYVHRIGRTGRAGA G +ISL Sbjct: 316 NAFKEGTLRVLVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISL 375 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALM--TDLPKPLRLTRPRTGNGPRRTGAPRNR 417 + AI+ G + V + + + +P N R RN+ Sbjct: 376 MDKTEQKMFEAIKELTGSDLNVERIEGFEPHWWDNDNQNEAEAQPVQHNDSRSRRDDRNK 435 Query: 418 R 418 R Sbjct: 436 R 436 >UniRef50_A9NFK0 ATP-dependent RNA helicase, superfamily II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFK0_ACHLI Length = 448 Score = 572 bits (1476), Expect = e-162, Method: Composition-based stats. Identities = 139/407 (34%), Positives = 215/407 (52%), Gaps = 4/407 (0%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KFS+ + ++ +AL G+ T IQ A+P+ L+G+D+ G AQTGTGKT AF Sbjct: 1 MKFSELNIIERIQKALTLSGYEAPTAIQEQAIPILLSGQDLLGSAQTGTGKTAAFAIPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + + +ALI+ PTRELA+QIH + + A+ + YGG +Q Sbjct: 61 QKIYETKE--HKAPRKVQALILTPTRELALQIHENVKIYAKYLNIISTTIYGGVSQKRQE 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ GVD++I T GRL+D Q I+L ++ +VLDEAD+M D+GFIKD+ + + P Sbjct: 119 EALKRGVDVVIATPGRLLDLMNQKIISLQDVRYLVLDEADQMLDMGFIKDVTSIVDKTP- 177 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R MLFSAT+ ++ L+ + + N E I V P +T I + ++ + K LL Sbjct: 178 -KKRQTMLFSATMPKQIEVLSKQILVNPERIAVTPVTQTLDAITQSVYMVNKANKTLLLI 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI ++F TKH ++ +L G + G +Q R R L F +G Sbjct: 237 DLIYTLNMKSVLVFTKTKHGANKLVKNLMNLGIESEPIHGSKSQAARERALANFKKGKTK 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARG+ I A+ +V N++LP+ E Y+HRIGRTGRAG SG ++SL L Sbjct: 297 ILVATDIAARGIDIEALDYVINFELPEVPETYIHRIGRTGRAGLSGMALSLVDPSEQKLL 356 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 +E +I I + + + + +T ++ + Sbjct: 357 TQVEKHINSKIEAVGHKYQIQSQPKQREVITDKLKTDTSKKQEKPKK 403 >UniRef50_C0Q9A4 DeaD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9A4_DESAH Length = 616 Score = 572 bits (1476), Expect = e-162, Method: Composition-based stats. Identities = 149/393 (37%), Positives = 214/393 (54%), Gaps = 10/393 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + +E FS+ L V++AL+ G+ T IQA +P LAGRD+ GQAQTGTGKT A Sbjct: 13 EPGFSESGFSEMGLIKPVLKALDDLGYETPTTIQAETIPYILAGRDLLGQAQTGTGKTAA 72 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGG 121 F + D K+ +P+ L++APTRELA+Q+ + A G + YGG Sbjct: 73 FALPLLSRI-------DIKLKKPQVLVLAPTRELAIQVAESFKGYAARIKGFNVLPVYGG 125 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y QL L+ GV +++GT GRL+D K+ ++L I +V+DEAD M +GFI D+ W Sbjct: 126 QAYAGQLNQLKRGVHVIVGTPGRLMDLMKRGVLDLTQIMTLVIDEADEMLRMGFIDDVEW 185 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + PP R LFSAT+ ++++A + + + + + + T I++ + Sbjct: 186 ILEQTPPG--RQVALFSATMPAPIKKIAIKYLTDPKDVFIRLRTATADTIRQRFWMVKGT 243 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K+ L ++E E D I+F TK E+ L A G+ L GD+AQK R R +D Sbjct: 244 HKLDALTRILEAETFDAIIVFVRTKTATVELAEKLEARGYAAVALNGDIAQKARERTIDR 303 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F +G +DILVATDVAARGL + V+HV NYD+P+ E YVHRIGRTGRAG +G +I Sbjct: 304 FKKGKIDILVATDVAARGLDVERVSHVINYDIPNGAESYVHRIGRTGRAGRAGDAILFVS 363 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLP 394 L IE I + K + D Sbjct: 364 PRERWMLKVIEKTTRQQIEMMKLPSTEAINDKR 396 >UniRef50_Q2NEZ7 Predicted helicase n=20 Tax=cellular organisms RepID=Q2NEZ7_METST Length = 583 Score = 572 bits (1476), Expect = e-162, Method: Composition-based stats. Identities = 144/401 (35%), Positives = 230/401 (57%), Gaps = 10/401 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + KF D + P++ +A+ GF +PIQ+LA+P LA +DV GQAQTGTGKT AF Sbjct: 1 MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGY 124 + D + N +A+I+ PTRELA+Q+ + L+ + + YGG Sbjct: 61 PLLENI-------DSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPI 113 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 D+Q+K L+ GV I+IGT GR++D+ + ++L I+ V+LDEAD M D+GF +DI ++ Sbjct: 114 DRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILE 173 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P +R +LFSATL + +LA N E ++V + T ++++ F + K+ Sbjct: 174 DIP--YERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKL 231 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 LL L++ D +++F NTK + +++ HL G+ L GD+ Q +R R++ +F + Sbjct: 232 ELLSRLLDLHDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKK 291 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G+++ILVATDVAARG+ + V VFN+D+P+D E YVHRIGRTGRAG +G + S Sbjct: 292 GNIEILVATDVAARGIDVGGVEAVFNFDIPNDNEYYVHRIGRTGRAGKTGKAYSFVSGRE 351 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 L I+ Y I + + + ++ K + + Sbjct: 352 IYQLRDIQRYAKTKIEQAPIPALSDVEEVKKDNFIEELKEK 392 >UniRef50_C4XQY7 ATP-dependent RNA helicase n=7 Tax=Deltaproteobacteria RepID=C4XQY7_DESMR Length = 496 Score = 572 bits (1476), Expect = e-162, Method: Composition-based stats. Identities = 150/418 (35%), Positives = 224/418 (53%), Gaps = 12/418 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F LH ++ +++ G+ TPIQA A+P + G D+ G AQTGTGKT AFL Sbjct: 1 MSFDSFCLHDSLIANIKRAGYETPTPIQAEAVPHVMEGHDLMGLAQTGTGKTAAFLLPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L+++PA + PR LI+APTRELA QI T L+ + YGG G Q+ Sbjct: 61 HRLITNPA----RTRSPRTLILAPTRELAEQIFRSTLDFMRGTRLRATVIYGGVGMFPQV 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVD+++ GRL+D+ Q ++ ++ +VLDEAD M+D+GF+ DI+ + +P Sbjct: 117 RALRQGVDVIVACPGRLLDHLNQGNVRFDGLETLVLDEADHMFDMGFLPDIKRILAALPA 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R +LFSAT+ + LA E + + + + ++ ++ S+ +K LL Sbjct: 177 --KRQTLLFSATMPPAISGLAAETLTDPVTVRIGH-LAPLSTVEHAIYPVSHNQKAPLLL 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ E + I+F TKHR + + L GH+ L G+++Q++R +D F RG Sbjct: 234 HLLGEAGKESVIVFTRTKHRAKNLAQQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQ 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARG+ + V HV N+D+PD E Y HRIGRTGRA G + + E + Sbjct: 294 ILVATDIAARGIDVSQVAHVVNFDIPDTAEAYTHRIGRTGRAERDGQAHTFVTGEDMGMV 353 Query: 369 PAIETYIGHSIPVSKYNPDALM-----TDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 AIE+++ +P P P RPR G G R G +R+R G Sbjct: 354 RAIESHMKKPLPRRNVEGFEPEPGEFRRSAPAPRSAARPRQGYGAPRQGGYGDRQRQG 411 >UniRef50_Q9VHP0 ATP-dependent RNA helicase bel n=13 Tax=Eukaryota RepID=DDX3_DROME Length = 798 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 135/399 (33%), Positives = 197/399 (49%), Gaps = 20/399 (5%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 F D L + + + TP+Q A+P+ + GRD+ AQTG+GKT Sbjct: 288 QNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTA 347 Query: 62 AFLTSTFHYLLSHPAIA--------DRKVNQPRALIMAPTRELAVQIHADAEPLAEATGL 113 AFL + + + R+ P L++APTRELA QI +A+ A + + Sbjct: 348 AFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRM 407 Query: 114 KLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDL 173 + + YGG+ +Q++ L+ G +++ T GRL D + + L I+ +VLDEADRM D+ Sbjct: 408 RPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDM 467 Query: 174 GFIKDIRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRI 231 GF IR + + MPP QR ++FSAT +++ELA + ++N ++ V T I Sbjct: 468 GFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENI 527 Query: 232 KEELFYPSNEEKMRLLQTLI-------EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVG 284 + + + +K L L+ E +IF TK + + L H V Sbjct: 528 TQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVT 587 Query: 285 LLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRI 344 + GD QK+R L F GD ILVAT VAARGL IP V HV N+DLP D E+YVHRI Sbjct: 588 SIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRI 647 Query: 345 GRTGRAGASGHSISLACEEYALNLPAIETYI---GHSIP 380 GRTGR G G + S E+ + + IP Sbjct: 648 GRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIP 686 >UniRef50_C5SI45 DEAD/DEAH box helicase domain protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SI45_9CAUL Length = 605 Score = 571 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 159/411 (38%), Positives = 225/411 (54%), Gaps = 4/411 (0%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F D L ++ LEK+G+H TPIQA A+P+ L D+ G AQTGTGKT AF Sbjct: 1 MTTFKDLGLSASLLSTLEKEGYHTPTPIQAQAIPILLNKHDLLGIAQTGTGKTAAFALPI 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 H++LS+ I + R L+++PTRELA QI + ++ GL++ +GG Y Q Sbjct: 61 LHHILSNRIIPAPRSC--RVLVLSPTRELATQIADSFKAYSKGLGLQIATIFGGVKYGPQ 118 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 K L+ G+DIL+ T GRLID+ +Q I+L A++ +VLDEAD+M D+GFIK IR + R+P Sbjct: 119 YKALQGGIDILVATPGRLIDHIEQKTIDLKAVEHLVLDEADQMLDMGFIKPIRQVASRLP 178 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 QR N+ FSAT+ + LA E + N + +E+ PE T R+ +++ + + K LL Sbjct: 179 A--QRQNLFFSATMPKEIAGLANELLTNPKKVEITPEATTAERVTQQVIFIEQQRKRALL 236 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L +E R +IF TK + + +L A G + GD Q +R R L F G + Sbjct: 237 SELYADEKLARTLIFTRTKRGADRVAAYLQAGGVEAAAIHGDKNQSQRERALQAFKAGRV 296 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATD+AARG+ + VTHV NY+LP E YVHRIGRT RAG GHSI+L ++ Sbjct: 297 RALVATDIAARGIDVDNVTHVINYELPFVAEAYVHRIGRTARAGKEGHSITLVADDERKL 356 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 L IE IP D + L + + + + R Sbjct: 357 LKDIERITRQRIPSWDRRKDQALKLLDEAILASGQTEKPKTPDRVVEKTAR 407 >UniRef50_D2QD85 DEAD/DEAH box helicase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QD85_9SPHI Length = 643 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 140/392 (35%), Positives = 225/392 (57%), Gaps = 10/392 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 FS A+ P++++A+ GF + +PIQA A+P L GRDV GQAQTGTGKT AF Sbjct: 33 FSSLAISPELLQAVTDMGFISPSPIQAEAIPPILDGRDVIGQAQTGTGKTAAFGIPALDL 92 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLK 129 + D + + LI+ PTRELA+Q+ + + LA+ G+++ YGGD ++Q++ Sbjct: 93 I-------DVQDRSVQTLILCPTRELALQVAEEIKKLAKYKRGIRIEAIYGGDSIERQIR 145 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+SGV I+IGT GR++D+ ++N + L +++++LDEAD M D+GF +DI + MP Sbjct: 146 SLKSGVHIVIGTPGRVMDHMERNTLKLNNVKMMILDEADEMLDMGFREDIESILEEMPE- 204 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSAT+S + ++ + + ++V ++ T I++ F ++ K+ ++ Sbjct: 205 -ERQTILFSATMSKPIMQITQKFQKDPVLVKVVKKELTNVNIEQVYFEVKSKAKVEVMCR 263 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI+ ++F NTK + +EI L G++ L GD+ Q +R ++ +F G +I Sbjct: 264 LIDMYDLKLLLVFCNTKRKVDEIVEDLQIRGYQAEGLHGDLRQAQRNNVMSKFRAGTTNI 323 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARG+ + V V N+D+P D E YVHRIGRTGRAG SG + S + Sbjct: 324 LVATDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSFVGRDEKYRFR 383 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 I+TY + + + K + + Sbjct: 384 EIQTYTKVKVEKGVIPSFEDIVGVRKARFIEQ 415 >UniRef50_Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 n=14 Tax=Eukaryota RepID=RH40_ARATH Length = 1088 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 136/423 (32%), Positives = 204/423 (48%), Gaps = 13/423 (3%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 F L P+++ L GF + TPIQA P+ L RD+ A+TG+GKT+ Sbjct: 428 ENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTL 487 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 +L F L + N P LI+APTRELA QI +A ++ + YGG Sbjct: 488 GYLIPAFILL---RHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGG 544 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 QLK LE G DI++ T GRL D + I+ + ++VLDEADRM D+GF IR Sbjct: 545 APKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRK 604 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPS 239 + +PP +R ++++AT VR++A + + N + + E I + + Sbjct: 605 IVNEIPP--RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVP 662 Query: 240 NEEKMRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 EK R L+ ++ + + IIF +TK C+ + + ++ GD Q +R + Sbjct: 663 QMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWV 721 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L++F G +L+ATDVAARGL I + V NYD P EDYVHRIGRTGRAGA+G + + Sbjct: 722 LNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFT 781 Query: 359 LACEEYALNLPAIETYI---GHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 E+ P + + +P + A+ ++ R G R Sbjct: 782 FFTEQDWKYAPDLIKVLEGANQQVPP-QVRDIAMRGGGGGGPGYSQDRRGMVNRFDSGGG 840 Query: 416 NRR 418 R Sbjct: 841 GTR 843 >UniRef50_C5CGQ2 DEAD/DEAH box helicase domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGQ2_KOSOT Length = 524 Score = 569 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 140/388 (36%), Positives = 211/388 (54%), Gaps = 10/388 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 FS+ L K++ ++EK GF TPIQ+ A+P+ L GRD+ GQA TGTGKT AF Sbjct: 2 SMNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIPL 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDK 126 L D + +ALI+ PTRELAVQ+ + LA +++ YGG ++ Sbjct: 62 LEML-------DYSSKKVQALILCPTRELAVQVAREIAALASNRKEIEVLAIYGGQSIER 114 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+ L+ G+ +++GT GR++D+ ++ + L + VVLDEAD M ++GF++DIR++ + Sbjct: 115 QINTLKKGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLNMGFLEDIRYILSHV 174 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 +R +FSAT+ + LA E E I+V + T +++ K Sbjct: 175 --GKERQITMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDA 232 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L LIE P +++F NTK + +E+ L A G+ V L GD++Q R R+++ F Sbjct: 233 LSKLIEYYNPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKS 292 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + +LVATDVAARG+ + + VFNYD+P D E YVHRIGRTGRAG +G + S A Sbjct: 293 IKVLVATDVAARGIDVDDIEAVFNYDIPQDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLH 352 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLP 394 L I+ Y I + + Sbjct: 353 RLREIQRYTKIKIKSLNVPSEKDVNTKR 380 >UniRef50_Q65XX1 Vasa-and belle-like helicase protein 1, isoform c n=3 Tax=Caenorhabditis elegans RepID=Q65XX1_CAEEL Length = 660 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 140/392 (35%), Positives = 204/392 (52%), Gaps = 15/392 (3%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + F++ P V+E + + G+ TP+Q ++P LA RD+ AQTG+GKT AFL Sbjct: 135 PAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFL 194 Query: 65 TSTFHYLLSHPA--------IADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLG 116 ++L+ R+ P AL+++PTRELA+QIH +A + + ++ Sbjct: 195 LPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTA 254 Query: 117 LAYGG-DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 175 + YGG + Y Q+ L +G ILI T GRLID +Q I L + +VLDEADRM D+GF Sbjct: 255 ILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGF 314 Query: 176 IKDIRWLFRR-MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKE 233 IR + + MPP R +FSAT ++ LA + + N ++ V T I++ Sbjct: 315 EPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQ 374 Query: 234 ELFYPSNEEKMRLLQTLI-EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQ 292 L + + EK L ++ E + ++F TK E+ L R + GD+ Q Sbjct: 375 RLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQ 434 Query: 293 KKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGA 352 +R R L+ F G ILVAT VAARGL IP V HV NYDLP D ++YVHRIGRTGR G Sbjct: 435 IERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGN 494 Query: 353 SGHSISLACEEYA---LNLPAIETYIGHSIPV 381 G + S ++ +L + +P Sbjct: 495 LGIATSFFNDKNRGIGRDLKNLIVESNQEVPE 526 >UniRef50_B4WCQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCQ8_9CAUL Length = 510 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 143/386 (37%), Positives = 215/386 (55%), Gaps = 4/386 (1%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F L+ +++AL +G+ TPIQ A+P + G+D+ G AQTGTGKT AF Sbjct: 15 STTFESMGLNKALLQALASEGYTKPTPIQEKAIPDVMQGKDLLGIAQTGTGKTAAFALPI 74 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 H L + K R L+++PTRELA QI + G ++ + +GG Y Q Sbjct: 75 LHRLAENRIA--PKPRTTRVLVLSPTRELATQIGDSFKAYGAHLGFRVAVIFGGVKYGAQ 132 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L+ G+DIL+ GRL+D+ +Q +++L + +++VLDEAD+M DLGFIK IR + R+P Sbjct: 133 ERALQQGLDILVAAPGRLLDHIQQKNLDLSSTEILVLDEADQMLDLGFIKPIRQIVSRIP 192 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R N+ FSAT+ + +LA E + + ++V P+ T RI + + + K LL Sbjct: 193 A--KRQNLFFSATMPTEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVHVEQGRKRALL 250 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + + R ++F TKH +++ +L A G G + G+ +Q +R R LD F +G L Sbjct: 251 TEMFSDPEYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLDAFKKGKL 310 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +LVATD+AARG+ + V+HV N++LP E YVHRIGRT RAGA G +IS + Sbjct: 311 RVLVATDIAARGIDVDGVSHVVNFELPHVPEAYVHRIGRTARAGADGTAISFVAGDEMKL 370 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDL 393 L IE IP D + L Sbjct: 371 LKDIEKVTRQKIPAIDRRNDKALGQL 396 >UniRef50_C8P265 DEAD/DEAH family ATP-dependent RNA helicase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P265_ERYRH Length = 594 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 133/405 (32%), Positives = 209/405 (51%), Gaps = 9/405 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F + L ++V A+ +KG+ T IQ+ A+P+ L D+ Q+QTGTGKT AF Sbjct: 17 MTFKELELEEEIVRAVTEKGYEEPTDIQSQAIPILLGNHDLLAQSQTGTGKTAAFGLPML 76 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQ 127 L+ P R + LI+ PTREL +Q+ + ++ G+ + YGG DKQ Sbjct: 77 S--LTQPGDKKRTNS----LILCPTRELCMQVAEEMRSFSKYKQGVNIACVYGGSPIDKQ 130 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L+ G DI++ T GRL+D+ ++ I L + +VLDEAD M ++GFI+DI +F +P Sbjct: 131 IRDLKRGADIVVATPGRLMDHIRRKTIRLDDCRHIVLDEADEMLNMGFIEDIEEIFSFLP 190 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R FSAT+ + +L+ + + E I + T RIK+ + + +K+ L Sbjct: 191 E--ERQFAFFSATMPKEIVKLSEKFLVEPERITLSRNNLTVSRIKQIYYTVESRDKVDLT 248 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ +IF NTK +E+ L G L GD+ Q+ R ++ F +G + Sbjct: 249 IQLLQLHKTSGTMIFCNTKKMVDELTTQLNKAGFPALGLHGDMKQEMRSMVMSRFKKGMV 308 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +L+ATDVAARG+ + ++ V NYD+P + E YVHRIGRTGRAG G +I+L Sbjct: 309 SVLIATDVAARGIDVDSMDVVINYDIPQELEYYVHRIGRTGRAGKEGLAITLVSRRQRYA 368 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG 412 + IE +I + + DL R N + Sbjct: 369 IKQIERLSNSTIVETPLPTKEQLNDLMVDQLAREIRKWNDHEQGK 413 >UniRef50_P0A9P7 Cold-shock DEAD box protein A n=201 Tax=Bacteria RepID=DEAD_ECOL6 Length = 629 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 141/395 (35%), Positives = 205/395 (51%), Gaps = 10/395 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 E F+D L ++EAL G+ +PIQA +P L GRDV G AQTG+GKT AF Sbjct: 5 ETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPL 64 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDK 126 L D ++ P+ L++APTRELAVQ+ ++ G+ + YGG YD Sbjct: 65 LQNL-------DPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDV 117 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 QL+ L G I++GT GRL+D+ K+ ++L + +VLDEAD M +GFI+D+ + ++ Sbjct: 118 QLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQI 177 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P + LFSAT+ +R + M + + ++ T I + + K Sbjct: 178 PEGH--QTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEA 235 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L +E E D AIIF TK+ E+ L +G+ L GD+ Q R + L+ G Sbjct: 236 LVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGR 295 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 LDIL+ATDVAARGL + ++ V NYD+P D E YVHRIGRTGRAG +G ++ Sbjct: 296 LDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERR 355 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE + +IP + L+ + Sbjct: 356 LLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAK 390 >UniRef50_Q17KA8 DEAD box ATP-dependent RNA helicase n=4 Tax=Eukaryota RepID=Q17KA8_AEDAE Length = 718 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 131/430 (30%), Positives = 202/430 (46%), Gaps = 15/430 (3%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 +F + ++ + ++GF T IQA+ + ++GRD+ G A+TG+GKT+A Sbjct: 95 NVPAPIMQFGESGFPSVFLDEMGRQGFQEPTSIQAVGWSIAMSGRDMVGIAKTGSGKTLA 154 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 ++ ++ + P + + + P AL++APTRELA QI + +GG Sbjct: 155 YILPALIHISNQPRLL--RGDGPIALVLAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGA 212 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q L GV+I+I T GRLID+ + NL +VLDEADRM D+GF IR + Sbjct: 213 SKHPQADDLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKI 272 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSNE 241 ++ P R +++SAT +R+LA E + I + I + + Sbjct: 273 ISQIRPD--RQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAANENIMQIIECCEEY 330 Query: 242 EKMRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 EK L L+ E + ++IIF TK + ++I + +G R + GD QK R + Sbjct: 331 EKETRLFKLLTELSQQGDSKSIIFVETKRKVDQITNVIKRNGWRCDGIHGDKTQKDRDYV 390 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L+ F R ILVATDVA+RGL + V +V N+D P++ EDY+HRIGRTGR+ G S + Sbjct: 391 LNTFRRLRSGILVATDVASRGLDVDDVKYVINFDFPNNTEDYIHRIGRTGRSTNKGTSYT 450 Query: 359 LACEEY---ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 A +L + + R G G + + Sbjct: 451 FFTPANGAKAGDLIGVLREANQFVNPELEQYARSGGRNRSGGRGRYGGGGGGRQMRNDGK 510 Query: 416 NRR----RSG 421 RR RSG Sbjct: 511 GRRGDDYRSG 520 >UniRef50_UPI00006CD03A P68-like protein, putative n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD03A Length = 699 Score = 569 bits (1467), Expect = e-161, Method: Composition-based stats. Identities = 129/430 (30%), Positives = 202/430 (46%), Gaps = 30/430 (6%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQAL-------------------ALPLT 43 + K+++ ++ +E F PIQA P+ Sbjct: 188 EVPQPFIKWNETKFPKYIMSVIEDSKFSEPMPIQAQYVTNKKQKKKYKMYECSFIPFPIV 247 Query: 44 LAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHAD 103 L+G D+ G AQTG+GKT++F+ ++ + + + P AL++APTRELA QI Sbjct: 248 LSGHDLIGIAQTGSGKTLSFMLPALVHINAQDPV--KPGEGPIALVLAPTRELANQIQEQ 305 Query: 104 AEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVV 163 + YGG Q K L +G DI+I T GRLID+ + N I+L + +V Sbjct: 306 CFKFGSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLV 365 Query: 164 LDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVE 222 LDEADRM D+GF IR + ++ P R ++FSAT VR LA + + + +I++ Sbjct: 366 LDEADRMLDMGFEPSIRKIVGQIRPD--RQTLMFSATWPQTVRRLALDFCHGDPIHIQIG 423 Query: 223 P-EQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWP-DRAIIFANTKHRCEEIWGHLAADG 280 E + I +++ +K ++ ++ D+ IIF TK C+++ L D Sbjct: 424 DMENNVNNDIDQQVEIIDKSQKYDRVKEILSTMTRSDKTIIFTQTKKDCDDLSKALQTDN 483 Query: 281 HRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDY 340 R + GD +Q+ R +++D F G ++ L+ATDVA+RGL + + V NYD P EDY Sbjct: 484 IRNICIHGDKSQRDRDKVMDLFKTGRVNTLIATDVASRGLDVKDIKLVINYDFPKQIEDY 543 Query: 341 VHRIGRTGRAGASGHSISLACEEY----ALNLPAIETYIGHSIPVSKYNPDALMTDLPKP 396 VHR+GRTGRAGA G +IS + + L + I Sbjct: 544 VHRVGRTGRAGAQGKAISFLDQYEDKKISKELVDVLKQNNQEISQDLLELSEANYKGNYS 603 Query: 397 LRLTRPRTGN 406 + R+ Sbjct: 604 NNYNKNRSSK 613 >UniRef50_A9M0D7 ATP-dependent RNA helicase, putative n=21 Tax=Neisseria RepID=A9M0D7_NEIM0 Length = 457 Score = 569 bits (1467), Expect = e-161, Method: Composition-based stats. Identities = 157/424 (37%), Positives = 228/424 (53%), Gaps = 14/424 (3%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS FS L ++V AL +G+ N TPIQA A+P LAG D+ AQTGTGKT Sbjct: 1 MSNP------FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKT 54 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAY 119 AF+ + L + + P R L++ PTRELA QI + + + L+ + + Sbjct: 55 AAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLF 114 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG DKQ L +G +I++ T GRL+D+ KQ +I+L +++VVLDEADRM D+GFI DI Sbjct: 115 GGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNIHLNKVEIVVLDEADRMLDMGFIDDI 174 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R + + +P QR +LFSAT S +R+LA + MN E +EV + T +++ + Sbjct: 175 RKIMQMLP--RQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVD 232 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K LL+ LI + ++ I+F TK + + L + GD +Q+ RL L Sbjct: 233 TIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETL 292 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F G+L +LVATD+AARGL I + V NY++P EDYVHRIGRTGRAGA G +ISL Sbjct: 293 NAFKDGNLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAISL 352 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALM-----TDLPKPLRLTRPRTGNGPRRTGAP 414 E +I+ G+ + + + P+ + PR N A Sbjct: 353 MDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKPEKPEMREPRQRNRYESAKAQ 412 Query: 415 RNRR 418 R + Sbjct: 413 REKN 416 >UniRef50_A5G1U8 DEAD/DEAH box helicase domain protein n=7 Tax=Alphaproteobacteria RepID=A5G1U8_ACICJ Length = 525 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 157/414 (37%), Positives = 225/414 (54%), Gaps = 5/414 (1%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F+ L ++ A+ ++ + TPIQA ++P+ L G D+ G AQTGTGKT A Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F+ H + ++ A RAL++APTRELA QI A + T + + GG Sbjct: 111 FVLPILHRIAANRA--RPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGA 168 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q + +ESGVD+L+ T GRL+D+ I L A++ VVLDEAD+M DLGFI IR + Sbjct: 169 KPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQI 228 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++P QR ++FSAT+ +R LA E + + + V E K RI +++ + EE Sbjct: 229 MAKLP--RQRQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLLLAPEE 286 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K L L+ + +RAI+F TKH +++ HL G + G+ +Q +R R LD+F Sbjct: 287 KKDKLAWLLADVAVERAIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQF 346 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G + +LVATD+AARG+ + V+HV N++LP+ E YVHRIGRT RAGA G +ISL Sbjct: 347 RSGRIRVLVATDIAARGIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEP 406 Query: 363 EYALNLPAIETYIGHS-IPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 L IET IG +P L R R G P+R G P+ Sbjct: 407 SELPYLRDIETLIGRHLVPGGAQPVRGLAPPHLLRARNQVARQGQMPKRNGPPK 460 >UniRef50_B3L9V8 Helicase, putative n=6 Tax=Alveolata RepID=B3L9V8_PLAKH Length = 528 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 139/402 (34%), Positives = 208/402 (51%), Gaps = 11/402 (2%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 + S V+++L+ TPIQ P+ L+G+D+ G+A+TG+GKT+ Sbjct: 106 EGVPNPVESISKIGFPDYVLKSLKNNNIVTPTPIQIQGWPIALSGKDMIGKAETGSGKTL 165 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AF+ F ++L+ P++ + P L++APTRELA QI + + + ++ AYGG Sbjct: 166 AFILPAFVHILAQPSLKY--GDGPIVLVLAPTRELAEQIRQECVKFSVESKIRNTCAYGG 223 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q+ L+ GV ILI GRLID +QN NL + +VLDEAD+M D+GF IR Sbjct: 224 VPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEIQIRK 283 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNN-AEYIEVEPEQKTG-HRIKEELFYPS 239 + ++ P R +++SAT V+ LA + ++ V T RIK+E++ Sbjct: 284 IVEQIRPD--RQTLMWSATWPKEVQSLARDLCKQQPIHVNVGSLTLTACRRIKQEIYLIE 341 Query: 240 NEEKMRLLQTLIEE--EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLR 297 EK+ L+ L++ DR I+F TK + I L DG + GD Q +R Sbjct: 342 EHEKIANLKLLLQRIFRDNDRIIVFVETKKNADFITKALRLDGVPALCIHGDKKQDERRW 401 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 +L++F G IL+ATDVA+RGL I V +V N+D P+ EDYVHRIGRTGRAGA G S Sbjct: 402 VLNDFKTGKSPILIATDVASRGLDIKDVKYVVNFDFPNQIEDYVHRIGRTGRAGAHGASF 461 Query: 358 SLACEEY---ALNLPAIETYIGHSIPVSKYNPDALMTDLPKP 396 + + A +L I +P + P+ Sbjct: 462 TFLTSDKYRLARDLVKILRESEQPVPPQLEKISYTSANNPRR 503 >UniRef50_Q2BP56 Putative ATP-dependent RNA helicase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP56_9GAMM Length = 427 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 151/401 (37%), Positives = 221/401 (55%), Gaps = 5/401 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ F++ AL P++ L+ G+ TPIQ+ A+PL L G D+ +AQTGTGKT +F Sbjct: 1 MSASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L +P R RAL++APTRELA+Q+ + G+++ YGG + Sbjct: 61 PIIEKLSKNPIDGYRP---VRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVE 117 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+K L+ G DIL+ T GRL+D +Q I+L ++ +VLDEADRM DLGFI I+ + Sbjct: 118 NQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDY 177 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 A+ R +LF+AT V LA +NN I+V P T +I++ + +K Sbjct: 178 --AADDRQTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQFAYQVDYGQKAD 235 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 +L LI E + ++F TK R +E+ +L +G + G+ +Q++R+R+L+EF G Sbjct: 236 ILSYLITEGKWGQTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAG 295 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 DL +LVATDVAARGL I ++ +V NYDLP+ E YVHRIGRTGRAG +G ++SL Sbjct: 296 DLHVLVATDVAARGLDIESLPYVVNYDLPNQPEAYVHRIGRTGRAGETGEAVSLVAPAER 355 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGN 406 L IE I I + L +P Sbjct: 356 EFLQRIEKLIKQKIKLRPVPRIEDGKRLEIDDFADKPMKRK 396 >UniRef50_A8WWC4 C. briggsae CBR-VBH-1 protein n=2 Tax=Caenorhabditis briggsae RepID=A8WWC4_CAEBR Length = 692 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 144/407 (35%), Positives = 205/407 (50%), Gaps = 30/407 (7%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + FSD P V+E + + G+ TP+Q ++P L RD+ AQTG+GKT AFL Sbjct: 159 PAAIENFSDAGFGPAVMENVTRSGYTKPTPVQKHSIPTLLFNRDLMSCAQTGSGKTAAFL 218 Query: 65 TSTFHYLLSHPAI-----------------------ADRKVNQPRALIMAPTRELAVQIH 101 ++++ R+ P AL+++PTRELA+QIH Sbjct: 219 LPIIQHIMAGGPDMIKTVSSATNIFGFKVILQPTFNNGRRTYYPSALVLSPTRELAIQIH 278 Query: 102 ADAEPLAEATGLKLGLAYGG-DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ 160 +A + T L+ + YGG + Y Q+ L SGV ILI T GRLID +Q I L + Sbjct: 279 KEAAKFSYKTNLQTAILYGGRENYRDQVNRLRSGVHILIATPGRLIDIIEQGFIGLSGCR 338 Query: 161 VVVLDEADRMYDLGFIKDIRWLFRR-MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEY 218 +VLDEADRM D+GF IR + + MPP R +FSAT ++ LA + + N + Sbjct: 339 YLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQLLAKDFLKENYVF 398 Query: 219 IEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEW-PDRAIIFANTKHRCEEIWGHLA 277 + V T I++ L + + EK + L ++ E + ++F TK E+ L Sbjct: 399 LAVGRVGSTSENIEQRLLWVNEMEKRQNLMDILMNEDATNLVLVFVETKRGANELAYFLN 458 Query: 278 ADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDC 337 R + GD+ Q +R R L+ F G ILVAT VAARGL IP V HV NYDLP D Sbjct: 459 RQQIRSVSIHGDLKQIERERNLEMFRSGQFPILVATAVAARGLDIPNVRHVVNYDLPGDS 518 Query: 338 EDYVHRIGRTGRAGASGHSISLACEEYA---LNLPAIETYIGHSIPV 381 ++YVHRIGRTGR G G + S ++ +L + +P Sbjct: 519 DEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKTLIMEANQEVPE 565 >UniRef50_C8WFI7 DEAD/DEAH box helicase domain protein n=3 Tax=Zymomonas mobilis RepID=C8WFI7_ZYMMN Length = 506 Score = 567 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 142/412 (34%), Positives = 220/412 (53%), Gaps = 7/412 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+D L ++++A+ + G+ TP+QA A+P L RD+ AQTGTGKT +F+ Sbjct: 15 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 74 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + PR+LI+ PTRELA Q+ + E + L + L GG +Q Sbjct: 75 DILAH----GRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQ 130 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 LE GVD+LI T GRL+D ++ I L + +++V+DEADRM D+GFI DI + ++P Sbjct: 131 AALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPT 190 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + R +LFSAT+ +++LA ++N + IE+ I + L S K + L Sbjct: 191 S--RQTLLFSATMPPAIKKLADRFLSNPKQIEISRPATANTLIDQRLIEVSPRSKKKKLC 248 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ E AIIF N K ++ L G VG + GD++Q +R L+ F G + Sbjct: 249 DMLRAEKDHTAIIFCNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELERFKNGQIS 308 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVA+D+AARGL + ++HVFN+D+P +DY+HRIGRTGR GASG +++ + Sbjct: 309 VLVASDIAARGLDVKGISHVFNFDVPTHPDDYIHRIGRTGRGGASGEALTFVTPADEEAI 368 Query: 369 PAIETYIGHSIPVS-KYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 AIE +G IP +A + + + + + +PR R Sbjct: 369 TAIEKLMGVEIPRLGNRKKNAYPSKSEETVSPKQAKPVQEKSAASSPRKAPR 420 >UniRef50_Q04VV9 ATP-dependent RNA helicase (Superfamily II) n=4 Tax=Leptospira RepID=Q04VV9_LEPBJ Length = 513 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 139/400 (34%), Positives = 217/400 (54%), Gaps = 10/400 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + KFS+ L ++ A+ + GF +PIQ+ A+P+ L G+D+ G AQTGTGKT AF Sbjct: 1 MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAI 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGY 124 L + + +ALI+ PTREL +Q+ L + G ++ YGG Sbjct: 61 PAIELL-------EVESKHLQALILCPTRELVIQVSEQFRKLMKYKGNFEVVPVYGGQEI 113 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 ++QLK L I+I T GR++D+ ++ I L I++VVLDEAD M D+GF +D+ ++ + Sbjct: 114 ERQLKALRKNPQIVIATPGRMMDHMRRGSIRLNDIKIVVLDEADEMLDMGFREDMEFILK 173 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 P R ++FSAT++ + L + + I+V ++ + +I++ + K Sbjct: 174 DTPID--RQTIMFSATMTEDILTLMKRFQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKG 231 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L LIE A++F NTK + + + L + G+ L GD+ QK+R ++++ F Sbjct: 232 EALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRN 291 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G+++ILVATDVA RG+ + V VFNYDLP D EDYVHRIGRTGRAG G + S + Sbjct: 292 GNIEILVATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQ 351 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 NL IE G I K + + ++ R+ Sbjct: 352 IYNLKKIERINGIKIEAGKIPTLDDLEETKIHSYTSKVRS 391 >UniRef50_B2UL73 DEAD/DEAH box helicase domain protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL73_AKKM8 Length = 423 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 147/418 (35%), Positives = 217/418 (51%), Gaps = 7/418 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + F + L ++ LE + TPIQA +PL L +D+ G AQTGTGKT AF Sbjct: 1 MVSTTFRELGLSAPILRQLENLEYKTPTPIQAACIPLLLQNKDLMGLAQTGTGKTAAFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 L + RALI++PTRELA QIH + A L + +GG GY Sbjct: 61 PLIQQLSE--RSGKPPGRRVRALILSPTRELAAQIHENIRAYARGLHLSTAVIFGGVGYA 118 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q K L G+DIL+ T GRLID+ ++ ++L ++ ++LDEAD M D+GF ++ + + Sbjct: 119 SQFKELAGGLDILVATPGRLIDHLERRTVSLDGVETLILDEADHMLDMGFAPALKKIVSK 178 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP-SNEEKM 244 +P +R +FSAT+ +R+LA + E + V P T R+++ L S EK Sbjct: 179 IP--RKRHTQMFSATMPDNIRQLAQTLLQKPETVRVSPPSSTADRVEQFLCMVGSQSEKR 236 Query: 245 RLLQTLIEEEW-PDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 L L++++ P R +IF T+H + + L+ + + GD +Q +R R+L EF Sbjct: 237 LLTLELLKQQELPGRTLIFTRTRHGADRLASFLSGKDYPASAIHGDKSQGRRERMLREFR 296 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G +LVATD+AARG+ + V V NYDLP++ E YVHRIGRT RAGA+G +I+L E Sbjct: 297 SGKTPVLVATDIAARGIDVKDVRLVINYDLPEEPEVYVHRIGRTARAGAAGQAIALCSPE 356 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 + +G +PV + P R R+ + APR R G Sbjct: 357 EIRKARNVHKLLGRLLPVHASSASVPAELRAVPE-ARRKRSSPMQEKRSAPRREPRKG 413 >UniRef50_Q7UG20 ATP-dependent RNA helicase n=2 Tax=Bacteria RepID=Q7UG20_RHOBA Length = 931 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 148/392 (37%), Positives = 216/392 (55%), Gaps = 10/392 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L +V +A+ G+ TPIQA +P L GRDV Q+QTGTGKT AF Sbjct: 306 FRDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPILSR 365 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLK 129 + D + +P+ L++APTRELA+Q+ G ++ YGG Y+ QLK Sbjct: 366 V-------DVRSRRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLK 418 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L GV +++GT GR+ID+ K+ ++LG++ +VLDEAD M ++GF++D++++ + P Sbjct: 419 QLRRGVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEG 478 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 R LFSATL +R++A E +N+ I ++ + T +++ + S +K+ L Sbjct: 479 --RQVALFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFVSPRDKIDALTR 536 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++E E D I+F TK + L+ G L GD+ QK R R +D+ RG LD+ Sbjct: 537 ILEVEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQLDV 596 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL +P ++HVFN+DLP D E YVHRIGRTGRAG SG +I L Sbjct: 597 LVATDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLTNAQRRQLR 656 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 IE I + A + + R Sbjct: 657 FIENTTKQPIEIIDIPTVADINEARVRRFKQR 688 >UniRef50_B9Y818 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y818_9FIRM Length = 556 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 134/387 (34%), Positives = 209/387 (54%), Gaps = 9/387 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF++ L P++ A+ G+ T IQ+ +P+ + G DV GQ+QTGTGKT AF Sbjct: 1 MKFNELNLSPEMSRAIADCGYTEATYIQSACIPVVMNGGDVIGQSQTGTGKTAAFAIPII 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQ 127 L +P+ALI++PTRELA+Q+ + + G++ YGG KQ Sbjct: 61 EML------EVTDRKRPQALILSPTRELAMQVCDEIRKFTKYKEGIRTVAVYGGQQISKQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L+ G DI++GT GR++D+ ++ + +V+VLDEAD M ++GF +DI + +P Sbjct: 115 ILELKKGADIVVGTPGRVLDHIRRRTLRFDQCRVLVLDEADEMLNMGFREDIETVIEALP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 QR +LFSAT+ + E+ + N +I+ Q +I++ + E K +L Sbjct: 175 --QQRQTVLFSATMPKPILEITSQYQTNPVHIKTPQTQINTPKIEQVYYVCPKEAKKEIL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 LI + P A+IF NTK +E+ L + G+ L GD+ Q+ R ++D F +G + Sbjct: 233 MQLISMQNPHLAMIFCNTKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDNFKKGKI 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +ILVATDVAARG+ + ++ VFNYDLP + E YVHRIGRTGRAG G +++L Sbjct: 293 NILVATDVAARGIDVDSMDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLITARQKYA 352 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLP 394 L +E + + + Sbjct: 353 LRDLERTTRSKLTQKPLPSLEEVRKIR 379 >UniRef50_B1KQF6 ATP-dependent RNA helicase rhlB n=10 Tax=Proteobacteria RepID=RHLB_SHEWM Length = 441 Score = 565 bits (1458), Expect = e-160, Method: Composition-based stats. Identities = 280/426 (65%), Positives = 339/426 (79%), Gaps = 5/426 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+THL+ QKF+DF+L+ ++ AL + GF CTPIQAL+LP+ L +D+AGQAQTGTGKT Sbjct: 1 MSETHLSNQKFADFSLNKEIKTALNESGFEFCTPIQALSLPILLQKKDIAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +AFL +TF +LLS P R++NQPRA+IMAPTRELA+QI DA LA+ TGLK+G+ YG Sbjct: 61 LAFLVATFDHLLSTPVPEGRQLNQPRAMIMAPTRELAIQIAKDATLLAKHTGLKVGIVYG 120 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G+ YD Q KVL+ GVDILIGTTGR+IDY +Q INL AIQ VVLDEADRM+DLGFIKDIR Sbjct: 121 GESYDVQRKVLDKGVDILIGTTGRIIDYVRQGIINLSAIQAVVLDEADRMFDLGFIKDIR 180 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 +LFRRMP A RLNMLFSATLS +V+ELA++ MN E + + P +KT IKEE+FYPS Sbjct: 181 FLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVVIAPNEKTSKNIKEEIFYPSM 240 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 +EKMRLL +LIEE+WP++AI+F+NTKH CE +W L DGHRVGLLTGDV QKKR+RIL+ Sbjct: 241 DEKMRLLLSLIEEDWPEKAIVFSNTKHSCENVWSWLEGDGHRVGLLTGDVPQKKRIRILE 300 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +FT G LDILVATDVAARGLHI V+HV+NYDLPDDCEDYVHRIGRTGRAG G S+S A Sbjct: 301 QFTEGKLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGKKGVSVSFA 360 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP---RTGNGPRRTGAP--R 415 CEEYALNLPAIE YI HSIPV+ Y+ + L+ D+P P+R+ R R G +G P R Sbjct: 361 CEEYALNLPAIEEYITHSIPVTNYDSEGLLDDIPAPIRVHRKHNNRPQQGRNNSGRPQGR 420 Query: 416 NRRRSG 421 N R+G Sbjct: 421 NGNRAG 426 >UniRef50_A0Z0M4 ATP-dependent RNA helicase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0M4_9GAMM Length = 582 Score = 565 bits (1458), Expect = e-160, Method: Composition-based stats. Identities = 153/405 (37%), Positives = 206/405 (50%), Gaps = 10/405 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS +F+ L + E L+ G+ TPIQA +PL L GRDV G AQTGTGKT Sbjct: 1 MSTPDTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAY 119 AF + D KV P+AL++ PTRELA Q+ G L++ + Sbjct: 61 AAFALPILANI-------DVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIF 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG +QLK L G I++ T GRL+D+ ++ I+L I VVLDEAD M +GFI D+ Sbjct: 114 GGADMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDV 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + P +R LFSAT+ RVR++A + ++N I V T I++ + Sbjct: 174 DTILAKTP--KERKVALFSATMPKRVRDIANKHLSNPAEISVAAAATTNENIEQCYWLAK 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ L+ L+ E + I+F T+ I L G + L GD+ QK RLR + Sbjct: 232 GASKLEALKRLLAFEDTEGVIVFTRTRESTTVIAEQLRQTGLKASPLNGDMDQKMRLRTV 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + G LD+LVATDVAARGL + +THV NYD+P D E YVHRIGRTGRAG G +I Sbjct: 292 SDLKSGALDVLVATDVAARGLDVERITHVINYDVPFDEEAYVHRIGRTGRAGRKGKAILF 351 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 L IE SIP K + + RT Sbjct: 352 VVPRERRMLRNIERLTRQSIPEIKLPSVLAIDAKRREAFADSIRT 396 >UniRef50_Q88NB7 ATP-dependent RNA helicase rhlB n=50 Tax=Gammaproteobacteria RepID=RHLB_PSEPK Length = 398 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 176/397 (44%), Positives = 243/397 (61%), Gaps = 2/397 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M + + +F DF L +++ A+ GF CTPIQA L TL G+D G+AQTGTGKT Sbjct: 1 MVEPQEGKTRFHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AFL S L P +R + +PRALI+APTREL VQI DA L + TGL + G Sbjct: 61 AAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVG 120 Query: 121 GDGYDKQLKVLE-SGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 G +DKQLK LE DIL+ T GRL+D+ ++ ++L ++V+VLDEADRM D+GFI + Sbjct: 121 GMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQV 180 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R + R+ PP ++R +LFSAT + V LA + N +E+EPE +++ ++ + Sbjct: 181 RQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVA 240 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +K +LL L+ + +R ++FAN K I L DG L+GDV Q KR+R L Sbjct: 241 GSDKYKLLYNLVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTL 300 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F G + +LVATDVA RG+HI ++HV N+ LP+D +DYVHRIGRTGRAG SG SIS Sbjct: 301 ESFREGRITVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISF 360 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKP 396 A E+ + LPAIE +G I PD L+ +P+ Sbjct: 361 AGEDDSYQLPAIEALLGRKIKCE-MPPDELLKPVPRK 396 >UniRef50_C7JBN9 DNA/RNA helicase n=19 Tax=cellular organisms RepID=C7JBN9_ACEP3 Length = 636 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 148/422 (35%), Positives = 211/422 (50%), Gaps = 10/422 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F+D L ++ A+ G+ + TPIQ A+P L RDV G AQTGTGKT + Sbjct: 149 TEDTNSVTFADLELSEPILRAISDMGYTHPTPIQEQAIPAILMARDVMGVAQTGTGKTAS 208 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F L + + PR+LI+ PTRELA+Q+ + + L L GG+ Sbjct: 209 FTLPMLEILSD----SRARARMPRSLILEPTRELALQVAENFVNYGKYLKLNHALLIGGE 264 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q +VL GVD+LI T GRL+D ++ + L ++V+DEADRM D+GFI DI + Sbjct: 265 SMADQKEVLNRGVDVLIATPGRLLDLFERGGLMLNHTGILVIDEADRMLDMGFIPDIEKI 324 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 +PP R +LFSAT++ +R+LA +++ + I V + I + Sbjct: 325 VGLLPPN--RQTLLFSATMAPTIRKLADAFLHSPKEITVARQSSVATTITTGIVVVDEYS 382 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K L+ L+++ AI+F N K + + L G L GD+ Q R L++F Sbjct: 383 KRETLRQLLKDPALQNAIVFCNRKRDVDILTKSLVKHGFSAAALHGDLPQSVRFSTLEKF 442 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 +L +LV +DVAARG+ I ++HVFN+DLP EDYVHRIGRTGRAG GH+ S+A Sbjct: 443 KNDELKVLVCSDVAARGIDIGGLSHVFNFDLPFHAEDYVHRIGRTGRAGREGHAYSIATP 502 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALM----TDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 AIE G IP + + P R +PRT R P R Sbjct: 503 YDKALAEAIEKLTGKEIPRMALDGVKQLEWSDEKRPPAGRTRKPRTPQRERENAVPTPRE 562 Query: 419 RS 420 + Sbjct: 563 QQ 564 >UniRef50_C7HXF4 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=C7HXF4_THIIN Length = 666 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 151/407 (37%), Positives = 208/407 (51%), Gaps = 10/407 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T F++ L +++AL G+ +PIQA +P LAGRDV GQAQTGTGKT AF Sbjct: 2 TSQQISPFAELGLPEPLLQALRDVGYETPSPIQAATIPPLLAGRDVLGQAQTGTGKTAAF 61 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGD 122 + D +AL++APTRELA+Q+ A G + YGG Sbjct: 62 ALPILAKI-------DCNARHTQALVLAPTRELAIQVAEAFARYATHLPGFNVLPIYGGQ 114 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y QL L+ G +++GT GR+ID+ ++ + L + +VLDEAD M +GFI D+ + Sbjct: 115 SYVPQLASLKRGAHVVVGTPGRIIDHLERGTLKLDQLAHMVLDEADEMLRMGFIDDVESI 174 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++ PP QR LFSAT+ +R +A + + + I ++ T I++ + S Sbjct: 175 LKKTPP--QRQVALFSATMPSAIRRIAQTYLRDPQEITIKAATTTATHIQQRYWMVSGLH 232 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K+ L ++E E + IIFA TK EE+ LAA G L GDV Q R R++ Sbjct: 233 KLDALTRILEVEPFEGMIIFARTKQATEELAEKLAARGFTAAALNGDVPQALRERMVQRL 292 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G LDILVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 293 KDGQLDILVATDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAILFVTP 352 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPR 409 L AIE I + + D + R Sbjct: 353 RERHLLRAIERATRQPITQMQLPSTEAVNDSRISRFMERITEAREQE 399 >UniRef50_A8REA9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8REA9_9FIRM Length = 572 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 129/392 (32%), Positives = 209/392 (53%), Gaps = 9/392 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F++ + ++ A+ + G+ T IQA A+P + G+DV G++ TGTGKT AF Sbjct: 1 MTTFNELHISEAILRAVSEMGYEQATEIQAKAIPYIMEGKDVLGRSNTGTGKTAAFGIPA 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDK 126 + A+ ALI+ PTREL Q+ + ++ G+K+ YGG ++ Sbjct: 61 IEMVQPQDKYAN-------ALIICPTRELVTQVAMELRKFSKYKEGVKIVPIYGGQPIER 113 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+++L+ G I++GT GR++D+ ++ + L I++V+LDEAD M ++GF +DI + M Sbjct: 114 QIQLLKRGCGIVVGTPGRIMDHLRRRTLKLSDIRMVILDEADEMLNMGFKEDIEEILSLM 173 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P +LFSAT + +A E N+ +E++ Q+T +++ + +K Sbjct: 174 PSERSYQTILFSATWPSEIMRIAKEFQNDPVTVEIKSAQRTIDTVEQLYYEVPRGKKANA 233 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ L+ P+ +IFANTK +E+ G L + L GD+ Q+ R R++++F G Sbjct: 234 LRVLLNHYDPELCMIFANTKKMVDELQGELNKHDIKACALHGDMKQEFRSRVMEQFRSGS 293 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC-EEYA 365 + IL+ATDVAARG+ + V V N+D+P D E Y+HRIGRTGRAG G +I+L Sbjct: 294 MPILIATDVAARGIDVDDVDLVINFDIPQDNEYYIHRIGRTGRAGKKGLAITLISGGRQR 353 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPL 397 L I Y +I A M + Sbjct: 354 SELKNIMRYTKTNIKHHALPTSAQMQAHNRKA 385 >UniRef50_C0W1P0 Superfamily II helicase n=2 Tax=Actinomyces RepID=C0W1P0_9ACTO Length = 616 Score = 564 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 137/393 (34%), Positives = 208/393 (52%), Gaps = 8/393 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 T F+D L V+ A+ + GF TPIQ A+P L GRD+ G AQTGTGKT AF Sbjct: 2 ETMTTFADLNLPENVLSAITEMGFETPTPIQEQAIPHLLEGRDIVGIAQTGTGKTAAFGL 61 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGY 124 ++ D N +A+++APTRELA+Q E A +K+ YGG Y Sbjct: 62 PMLAHI-------DPGFNAVQAIVLAPTRELAMQSATAIESFAAHMPKVKVVTVYGGASY 114 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q+K L+SG +++GT GR+ID ++ + L + V+VLDEAD M +GF +D+ + Sbjct: 115 TPQIKGLKSGAQVVVGTPGRVIDLIEKGALKLNNVSVLVLDEADEMLRMGFAEDVETIAA 174 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 MP + +R+ LFSAT+ ++ +A + + + IEV + T I + + K+ Sbjct: 175 SMPESGKRITALFSATMPDFIQRVADQHLTDPVRIEVARQSSTVENIHQTYAVVPFKHKL 234 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L ++ D AI+F T+ +E+ +A G ++GDV+Q +R RI+ Sbjct: 235 GALGRVLATRDEDAAIVFVRTRVDADEVAVDMATRGFTAAAISGDVSQNERERIVSRLRD 294 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G LD+LVATDVAARGL + + V N+D+P + E YVHR+GRTGRAG +G S++ + Sbjct: 295 GSLDVLVATDVAARGLDVERIGLVINFDVPRETEAYVHRVGRTGRAGRAGRSLTFFTPKE 354 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPL 397 L IE G + +++ Sbjct: 355 QFRLRQIEKLTGTKMEEIVIPSPREVSEFRARR 387 >UniRef50_B7EQA6 cDNA clone:J023079L21, full insert sequence n=5 Tax=Magnoliophyta RepID=B7EQA6_ORYSJ Length = 759 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 199/362 (54%), Gaps = 12/362 (3%) Query: 24 LEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVN 83 +++ GF TPIQA + P+ L RD+ A+TG+GKT+ +L F L + + Sbjct: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILL---KRLQHNSRD 302 Query: 84 QPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTG 143 P L+++PTRELA QI +A+ ++ + YGG QL+ LE G DI++ T G Sbjct: 303 GPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPG 362 Query: 144 RLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSY 203 RL D + ++L + +VLDEADRM D+GF IR + +++ P +R ++F+AT Sbjct: 363 RLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQP--KRQTLMFTATWPK 420 Query: 204 RVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPD-RAI 260 VR++A + ++N + + + I + + + EK R L ++ + P + I Sbjct: 421 EVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKII 480 Query: 261 IFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL 320 IF +TK C+++ +LA + + GD +Q +R +L EF G ILVATDVAARGL Sbjct: 481 IFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGL 539 Query: 321 HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN---LPAIETYIGH 377 I + V NYD P EDYVHRIGRTGRAGA+G + + C++ + L I Sbjct: 540 DIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQ 599 Query: 378 SI 379 S+ Sbjct: 600 SV 601 >UniRef50_O97031 DjVLGA n=1 Tax=Dugesia japonica RepID=O97031_DUGJA Length = 726 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 139/384 (36%), Positives = 196/384 (51%), Gaps = 11/384 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F + LHP V + + TP+Q A+P+ + RD+ AQTG+GKT AFL Sbjct: 210 VTSFLELKLHPIVSHNISLTQYTRPTPVQRYAVPIIMQRRDLMACAQTGSGKTAAFLIPL 269 Query: 68 FHYLLSHPAI-----ADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 + + K P ALI+APTRELAVQI+ +A + + ++ + YGG Sbjct: 270 LSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGR 329 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 QL+ + G ++L+ T GRL D ++ I L I+ +VLDEADRM D+GF IR + Sbjct: 330 DIRGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFEPQIRKI 389 Query: 183 FRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + MPP QR ++FSAT ++ LA + + + ++ V T I + + Y Sbjct: 390 VEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVGSTSQNITQRIVYVDE 449 Query: 241 EEKMRLLQTLIEEEWPDR-AIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 EK L ++ + D ++F TK + + G L +G V + GD +Q R L Sbjct: 450 NEKRDHLLDILTDIDSDSLILVFVETKRGADALEGFLHTEGSCVASIHGDRSQSDRELAL 509 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 F G ILVAT VAARGL IP V V NYDLP D E+YVHRIGRTGR G G +IS Sbjct: 510 QSFREGSTPILVATRVAARGLDIPNVKFVINYDLPTDIEEYVHRIGRTGRVGNLGEAISF 569 Query: 360 ACEEY---ALNLPAIETYIGHSIP 380 ++ A L I +P Sbjct: 570 YTDKNNNVAKELVDILLEANQIVP 593 >UniRef50_D1INE6 Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=7 Tax=Eukaryota RepID=D1INE6_VITVI Length = 1180 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 125/369 (33%), Positives = 195/369 (52%), Gaps = 12/369 (3%) Query: 20 VVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIAD 79 ++ + GF TPIQA + P+ L RD+ A+TG+GKT+ +L F +L I + Sbjct: 33 LLFQVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHL---KRIRN 89 Query: 80 RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILI 139 P L+++PTRELA QI +A ++ L YGG QL+ L+ G DI++ Sbjct: 90 NPQMGPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVV 149 Query: 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSA 199 T GRL D + ++L + +VLDEADRM D+GF IR + + +P +R ++++A Sbjct: 150 ATPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPA--RRQTLMYTA 207 Query: 200 TLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPD 257 T VR++A + + N + + E I + + EK + L+ ++ + P Sbjct: 208 TWPKEVRKIAADLLVNPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPG 267 Query: 258 -RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVA 316 + IIF +TK C+++ +L + GD +Q +R +L++F G +LVATDVA Sbjct: 268 SKIIIFCSTKKMCDQLARNLTRP-FGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVA 326 Query: 317 ARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYI- 375 ARGL I + V NYD P EDYVHRIGRTGRAGA+G + + E+ A + + Sbjct: 327 ARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLE 386 Query: 376 --GHSIPVS 382 +P Sbjct: 387 GANQRVPPE 395 >UniRef50_UPI000186EE68 DEAD box ATP-dependent RNA helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EE68 Length = 755 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 129/402 (32%), Positives = 198/402 (49%), Gaps = 27/402 (6%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 Q F + V+ ++K+GF T IQA P+ L+GRD+ G AQTG+GKT+A Sbjct: 137 NVPNPNQTFEESNFPANVMAVIKKQGFLKPTAIQAQGWPIALSGRDMVGIAQTGSGKTLA 196 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 + ++ + ++ K + P AL++APTRELA QI + A+ + ++ +GG Sbjct: 197 YALPATVHITNQKPLS--KGDGPIALVLAPTRELAQQIQSVAKDFGASCSIRNTCIFGGA 254 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q + LE GV+I+I T GRLID+ + NL +VLDEADRM D+GF IR + Sbjct: 255 PKGSQARDLERGVEIVIATPGRLIDFLDKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKI 314 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSNE 241 ++ P R +++SAT V+ LA + +++ I + H I++ + + Sbjct: 315 IEQIRPD--RQVLMWSATWPKEVQTLAEDFLHDYIQINIGSLSLAANHNIRQHVEVMQDS 372 Query: 242 EKMRLLQTLIEEEWPDR---AIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 EK L L+ + DR +IF TK + ++I + +G + GD +Q++R + Sbjct: 373 EKEGRLTNLLRDIGGDRNNKILIFVETKKKVDDIARLVKQEGFPAICMHGDKSQQERDHV 432 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L+EF G +LVATDVAARG + H YVHRIGRTGR+ G + + Sbjct: 433 LNEFRSGKCAVLVATDVAARG----KIRH------------YVHRIGRTGRSSQMGTAFT 476 Query: 359 LACEEYALN---LPAIETYIGHSIPVSKYNPDALMTDLPKPL 397 + A L A+ I A T P P Sbjct: 477 FFTPQNARQAKGLVAVLEEASQPINPKVTELLAATTKGPTPE 518 >UniRef50_D1B4W7 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=D1B4W7_SULD5 Length = 583 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 135/386 (34%), Positives = 215/386 (55%), Gaps = 10/386 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 Q F F LH +++A+ + GF +P+QA A+PL L G D+ QAQTGTGKT AF T Sbjct: 1 MQTFESFGLHQDILKAINEAGFTEPSPVQAEAIPLVLQGHDIVAQAQTGTGKTAAFGLPT 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + D N+ + L++ PTRELA Q+ + L G+K YGG Y +Q Sbjct: 61 MSMI-------DANQNRVQLLVITPTRELATQVSDELYSLGRFCGIKTVTIYGGSSYSRQ 113 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + ++E G +++ T GR++D K + A ++VVLDEAD M D+GF++DI +F +P Sbjct: 114 IGLIEKGASVIVATPGRMLDLLKNGRLPGFAPKMVVLDEADEMLDMGFLEDIEEIFTYLP 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPE-QKTGHRIKEELFYPSNEEKMRL 246 +R +LFSAT+ ++ LA + ++ +++ + P+ T I++ + + E+ Sbjct: 174 --KERQTLLFSATMPEPIKRLASKILHEPKFVSITPKDHTTNEDIEQLYYVINEYERDDA 231 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 + L++ P+++I+F TK + + L A G+ L GD+ Q +R ++ F Sbjct: 232 MIRLLDALEPEKSIVFCRTKKEVDRLSTQLMAVGYAAKGLHGDMEQNQRESVIKAFRSSQ 291 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 ++ILVATDVAARGL++ ++HVFNY +P D E YVHRIGRTGRAG G +I+L Sbjct: 292 IEILVATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVTPIEFH 351 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTD 392 ++ I +G I + + Sbjct: 352 SMQRIGKKVGSKIEHRIVPNLRDVKE 377 >UniRef50_D2LXV0 DEAD/DEAH box helicase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LXV0_BACS4 Length = 500 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 147/394 (37%), Positives = 218/394 (55%), Gaps = 9/394 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D + P +VEA+EK GF TPIQ +PL G+D+ GQAQTGTGKT+AF Sbjct: 4 FKDLNIQPSIVEAIEKMGFEETTPIQEKVIPLGKEGQDIIGQAQTGTGKTVAFGIPCVEQ 63 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 ++ + P+AL++ PTRELA+Q+ + L + G+K YGG +Q+ Sbjct: 64 VV-------VEEKHPQALVLTPTRELAIQVAEELNKLGQVKGIKALPIYGGQEITRQITA 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ I++ T GR +D+ ++ I +++VVLDEAD M +GFI+DI + + +P Sbjct: 117 LKKRPQIIVATPGRYMDHMRRKTIRPEFLKIVVLDEADEMLSMGFIEDIETILQEVP--G 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R +LFSAT+ +++ +A MN I V+ +Q T I++ S +EK L L Sbjct: 175 ERQTLLFSATMPPKLKTIADRFMNKPVSIAVKAKQLTVENIEQRYIALSEKEKFDTLCNL 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 ++ E P+ AIIF TK R +E+ L+ G V L GD+ Q++R +++ +F RG +D++ Sbjct: 235 LDMETPELAIIFGRTKRRVDELTESLSIRGFAVEGLHGDMKQERRDQVIRKFKRGSIDVM 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL + V+HV N+DLP D E YVHRIGRTGRAG G S S + +L Sbjct: 295 VATDVAARGLDVNDVSHVINFDLPQDSESYVHRIGRTGRAGKKGISYSFVTHKEKDHLRY 354 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 IE + A + + Sbjct: 355 IEESTRQKMKQVDAPTLADAMRGRHKQAVNELKK 388 >UniRef50_D1IXE3 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=8 Tax=Magnoliophyta RepID=D1IXE3_VITVI Length = 797 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 139/432 (32%), Positives = 213/432 (49%), Gaps = 21/432 (4%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 SK + + + L ++++A+E+ G+ +PIQ A+PL L RDV G A+TG+GKT Sbjct: 299 SKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTA 358 Query: 62 AFLTSTFHYLLSHPAIADR-KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AF+ Y+ P +++ + P A++MAPTRELA QI + A G+K+ G Sbjct: 359 AFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVG 418 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G ++Q + G +++I T GRLID ++ + L VVLDEADRM D+GF + Sbjct: 419 GQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVV 478 Query: 181 WLFRRMPPAN---------------QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ 225 + MP +N R +FSAT+ V LA + + N + + Sbjct: 479 GVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG 538 Query: 226 KTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGL 285 K I + + EKM LQ L++E AI+F NTK + + L G+RV Sbjct: 539 KATDLITQHVIMMKESEKMFKLQKLLDELGDKTAIVFINTKKSADNLAKGLDKAGYRVTT 598 Query: 286 LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIG 345 L G +Q++R L+ F ++LVATDVA RG+ IP V HV NYD+P + E Y HRIG Sbjct: 599 LHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 658 Query: 346 RTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 RTGRAG +G + + + ++ + + S P+ + + Sbjct: 659 RTGRAGKTGVATTFLTLHDSDVFYDLKQMLIQN--NSPVPPELARHEA---SKFKPGAIP 713 Query: 406 NGPRRTGAPRNR 417 + P R +R Sbjct: 714 DRPPRRNDTESR 725 >UniRef50_A2EVI2 DEAD/DEAH box helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2EVI2_TRIVA Length = 598 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 119/401 (29%), Positives = 192/401 (47%), Gaps = 5/401 (1%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 S F + L + + + + TPIQ++++P+ L G D+ G A+TG+GKT Sbjct: 118 SDVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTA 177 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AFL ++ + + + P L+++PTRELA QI A+ + ++ +GG Sbjct: 178 AFLIPAMVHIGLQEPMY--RGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGG 235 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 G Q L +++ T GRLID+ + + + +VLDEAD+M D+GF IR Sbjct: 236 AGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRK 295 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSN 240 + + + R M+FSAT +++LA + + + ++ + + T IK+ + Sbjct: 296 IIGHI--SKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQVITKCEE 353 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EK+ ++ E D+ IIF TK +++ +L G + L GD AQ +R +L Sbjct: 354 FEKLSKCLEVLNEHKDDKIIIFTKTKRTTDDLQENLNMKGFQAYSLHGDKAQNQRDFVLG 413 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F ILVATDVAARGL + + V NYD P D E YVHRIGRT R G +++ Sbjct: 414 KFRSCKKGILVATDVAARGLDVNDIDIVINYDFPGDIETYVHRIGRTARGNKEGLAVTFF 473 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 +E + + + AL PK Sbjct: 474 TDENKNMSRKLAKIMTQAKQELPDWLKALADVTPKGAWKEG 514 >UniRef50_Q46G62 ATP-dependent RNA helicase n=7 Tax=cellular organisms RepID=Q46G62_METBF Length = 579 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 137/389 (35%), Positives = 208/389 (53%), Gaps = 10/389 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGR-DVAGQAQTGTGKTMAFLTSTF 68 KF L +++AL+KKGF TPIQ +PL L G D+ GQAQTGTGKT AF Sbjct: 6 KFKALGLSDSMLKALKKKGFEEPTPIQEKVIPLFLKGECDIIGQAQTGTGKTTAFGAPII 65 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + K + +A+++ PTRELA+Q+ + L L + YGG +Q Sbjct: 66 EKI-------PEKSGKVQAIVLTPTRELAIQVSEELNSLKGDKKLHIVPIYGGQSMTQQF 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 ++L+SGVDI++GT GR+ID+ ++ +NL I VLDEAD M ++GFI DI+ + + P Sbjct: 119 RMLKSGVDIVVGTPGRVIDHLERKSLNLENIAYFVLDEADEMLNMGFIDDIKEILKATGP 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + + FSAT+ + + + M N EY+ ++ E + ++ F +K L Sbjct: 179 DKR--MLFFSATMPKPILGIIKKHMKNYEYVAIKKEDLDVNLTEQIYFEVKESDKFEALC 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +I+ E ++F TK ++ L G+ L GD++Q++R +IL+ F + ++ Sbjct: 237 RIIDIEDEFYGLVFCRTKTDTSQLAQKLGDRGYAADALHGDLSQREREKILNRFRKQKIN 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARG+ I +THV NY LP D E YVHRIGRTGRAG G +I+ L Sbjct: 297 ILVATDVAARGIDIMDLTHVINYSLPQDPESYVHRIGRTGRAGKQGTAITFVTSTEYRRL 356 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPL 397 I+ ++ + + + Sbjct: 357 TYIKKTSKSAMKRGRIPEIKDVIKAKRAR 385 >UniRef50_D2V713 ATP-dependent RNA helicase n=1 Tax=Naegleria gruberi RepID=D2V713_NAEGR Length = 629 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 150/390 (38%), Positives = 213/390 (54%), Gaps = 15/390 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F + L PK+++ +E+ GF TP+Q ++P+ LAGRD+ AQTG+GKT AFL Sbjct: 154 FKEANLPPKLMQNIERAGFGKPTPVQKHSIPIVLAGRDLLSCAQTGSGKTCAFLFPIISN 213 Query: 71 LLSHP---------AIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 L++ P + D V P LIMAPTREL+ QI+ ++ TG + +AYGG Sbjct: 214 LMTQPGYETVMPHPELMDTLVTCPSVLIMAPTRELSTQIYDESRKFTYHTGRRTVVAYGG 273 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 QLK LE G DIL+ T GRL+D + I+L +Q +VLDEADRM D+GF IR+ Sbjct: 274 AAIQYQLKQLERGCDILVATPGRLVDLIDRGSISLHNVQYLVLDEADRMLDMGFEPQIRY 333 Query: 182 LFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + MP QR+ ++FSAT ++ LA + ++N + V T I ++ Y Sbjct: 334 IVEKTGMPAPGQRITLMFSATFPKNIQTLARDFLHNNLNLTVGRVGSTHENILQKFVYCK 393 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 ++EK L+ I ++F TK + L +G + + GD Q++R L Sbjct: 394 DDEKRDLMLEAIASVET-LTLVFVKTKKEASILEYFLMKNGFKSSSIHGDKTQRERETAL 452 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F RG ILVATDVA+RGL I V HV NYDLP++ EDYVHRIGRTGRAG +G S S Sbjct: 453 ENFRRGITPILVATDVASRGLDINDVGHVINYDLPENIEDYVHRIGRTGRAGNTGISTSF 512 Query: 360 ACEEY---ALNLPAIETYIGHSIPVSKYNP 386 ++ A +L + +P Sbjct: 513 FTDKNNQIADDLITVLEEAKQEVPPFIVEG 542 >UniRef50_B5EAF1 DEAD/DEAH box helicase domain protein n=3 Tax=Deltaproteobacteria RepID=B5EAF1_GEOBB Length = 471 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 139/388 (35%), Positives = 212/388 (54%), Gaps = 9/388 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F LHPKV +E G+ TPIQ A+P ++G+DV G AQTGTGKT AF Sbjct: 1 MDFKQFNLHPKVQAGIEAMGYVTPTPIQLQAIPSVISGQDVLGLAQTGTGKTAAFGLPML 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L+ + R L++APTRELA QI+ + + T L+ YGG + Q+ Sbjct: 61 HRLVQ------EERGHVRGLVLAPTRELAEQINDALNGMGKQTRLRSVTVYGGVNINTQI 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L+ G +I++ GRL+D+ Q I+L ++++VLDEAD+M+D+GF+ D+R + R +P Sbjct: 115 KKLKEGAEIVVACPGRLLDHISQGTIDLSRVEILVLDEADQMFDMGFLPDVRKILRALP- 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N++FSAT+ +R LA E + N ++V + L+ K LL Sbjct: 174 -GKRQNLMFSATMPDDIRRLAHEILRNPVTVQV-SRTAPAATVSHALYPVGQHLKTPLLF 231 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ + +IF TKHR + + L G++ L G+++Q +R LD F G Sbjct: 232 EMLKHTDTESVLIFTKTKHRAKRVGEQLEKAGYKATSLQGNLSQNRRQAALDGFRDGTFQ 291 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 I+VATD+AARG+ + ++HV NYD+PD E Y HRIGRTGRA +G + ++ E + Sbjct: 292 IMVATDIAARGIDVSLISHVINYDIPDTPEAYTHRIGRTGRAAKTGDAFTMVTSEDDYTV 351 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKP 396 +IE +G I + P+ Sbjct: 352 RSIEKVLGTKIERRRIEGFDYAVPAPQK 379 >UniRef50_B3QTY3 DEAD/DEAH box helicase domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTY3_CHLT3 Length = 431 Score = 562 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 151/408 (37%), Positives = 209/408 (51%), Gaps = 5/408 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++ F +L+P ++ AL++ G+ T IQA A+P + G+D+ AQTGTGKT AF Sbjct: 1 MSLINFESISLNPSILRALKELGYETPTAIQAAAIPEAILGKDILATAQTGTGKTAAFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 H L + + + PRALI+ PTRELA+QI + A L+ G+ GG Sbjct: 61 PILHRLGENRSYD---IRAPRALILTPTRELALQIDNNIRLYARYLRLRTGVIMGGVPAH 117 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+K+L DIL+ T GRLID Q I L IQ VLDEADRM D+GFI DIR + Sbjct: 118 PQIKMLRRNPDILVATPGRLIDLFDQGFIGLDQIQTFVLDEADRMLDMGFIDDIRRIESL 177 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P + +LFSATLS + LA + IEV P I +++ + K Sbjct: 178 QPRDH--QTLLFSATLSPEIEALASRMLREPVRIEVAPVSSVADNITQKVLFVEQNNKRE 235 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL L +E RA++F TK R + L G + +Q+ R R L F RG Sbjct: 236 LLHNLFKENDIKRALVFTRTKQRANHVAEQLIRLGISADAIHSSKSQRARQRALMLFDRG 295 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 +++LVATD+AARG+ + ++HV NY+LPDD E+YVHRIGRT RAGASG ++S + Sbjct: 296 KINVLVATDIAARGIDVDGISHVINYELPDDPENYVHRIGRTARAGASGTALSFCDADEV 355 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGA 413 L IE SI + NP + ++ Sbjct: 356 RMLKGIEKLTKSSIAICDNNPFHSIAVASMHKVAKAGNKPQYFQKKPR 403 >UniRef50_Q5NZY2 ATP-dependent RNA helicase DeaD n=12 Tax=Bacteria RepID=Q5NZY2_AZOSE Length = 658 Score = 562 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 141/396 (35%), Positives = 210/396 (53%), Gaps = 14/396 (3%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ + F+ L +++AL + G+ +PIQA+ +P LAG D+ G+AQTGTGKT Sbjct: 39 MTSP---IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKT 95 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAY 119 AF L D V P+ L++APTRELA+Q+ + A+ G + Y Sbjct: 96 AAFALPLLDRL-------DLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVY 148 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG QL+ L G +++GT GR++D+ ++ +NL ++ +VLDEAD M +GFI D+ Sbjct: 149 GGQSMVVQLRQLARGAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDV 208 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 W+ + P +R LFSAT+ +R +A + ++++ T ++ S Sbjct: 209 EWILQHTPA--ERQTALFSATMPDAIRRVAHRYLREPREVKIKASTTTVSTTRQRYCQIS 266 Query: 240 NEEKMRLLQTLIE-EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 K+ L ++E EE D AIIF TK E+ L A G+ L GD+ Q+ R R+ Sbjct: 267 VAHKLDALTRILEVEEDFDAAIIFVRTKTATVELADKLEARGYSAAALNGDMTQQLRERV 326 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 +++ G LDI+VATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG +G +I Sbjct: 327 IEQLKGGQLDIVVATDVAARGLDVSRISHVINYDIPYDTEAYVHRIGRTGRAGRTGSAIL 386 Query: 359 LACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLP 394 L IE I + + D Sbjct: 387 FVAPREMRMLKVIERATRQPIEALQLPSREAVADKR 422 >UniRef50_D0MZ17 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZ17_PHYIN Length = 2091 Score = 562 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 128/414 (30%), Positives = 197/414 (47%), Gaps = 11/414 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 QK++ ++++ ++K G+ IQ ALP ++GRDV G A+TG+GKT+A Sbjct: 1484 NCPRPLQKWTQCGFSVRMLQLIKKHGYEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLA 1543 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL F ++L+ P + ++ P +IMAP RELA QI+ +A ++ GL+ YGG Sbjct: 1544 FLLPMFRHVLAQPPL--QENEGPIGIIMAPARELAQQIYVEARKFSKGLGLRATAVYGGS 1601 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYA---KQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 +Q+ L+ G DI+I T GR+ID ++L + VVLDEADRM+D+GF I Sbjct: 1602 SVSEQIANLKRGSDIVICTPGRMIDILCMSAGKMVSLQRVTYVVLDEADRMFDMGFEPQI 1661 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + P R +LFSAT V LA + + I V I + + Sbjct: 1662 TKIMMNIRPD--RQTLLFSATFPRSVESLARKVLKKPVEITVGTRSTASGDITQYVEVRE 1719 Query: 240 NEEKMRLLQTLIE-EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 ++K L L+ ++F N + C++I+ L G+ L G Q R Sbjct: 1720 EDDKFMRLLQLLGLWYEKGNILVFVNKQQACDQIFQDLMKAGYPALSLHGGKDQVDRDYT 1779 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 +D+F R ++VAT VA RGL + + V NY P+ EDYVHR+GRTGRAG G + + Sbjct: 1780 IDDFKRKVRTVMVATSVAGRGLDVKDLVLVINYHCPNHMEDYVHRVGRTGRAGRKGTAYT 1839 Query: 359 LACEEYALNLPAIETYI---GHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPR 409 + + + +IP T K +G + Sbjct: 1840 FISPDEEEYSVDLVKALENAKQTIPPELTALAEGFTAKVKRGEARYHGSGFKGK 1893 >UniRef50_Q86XP3 ATP-dependent RNA helicase DDX42 n=64 Tax=Eukaryota RepID=DDX42_HUMAN Length = 938 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 129/425 (30%), Positives = 214/425 (50%), Gaps = 14/425 (3%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 F+ F +++ + K + TPIQ +P+ L+GRD+ G A+TG+GKT AF Sbjct: 248 PPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAF 307 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 + +++ + + P A+I+ PTREL QIHA+ + +A L+ YGG Sbjct: 308 IWPMLIHIMDQKEL--EPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGS 365 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 +Q K L+ G +I++ T GRLID+ K+ NL + +V DEADRM+D+GF +R + Sbjct: 366 MWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIA 425 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-E 242 + P R +LFSAT ++ +LA + + + + + + + + + Sbjct: 426 SHVRPD--RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPS 483 Query: 243 KMRLLQT-LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K L L+E ++F K EE+ +L +GH +GLL GD+ Q +R +++ + Sbjct: 484 KWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISD 543 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F + D+ +LVATDVAARGL IP++ V NYD+ D + + HRIGRTGRAG G + +L Sbjct: 544 FKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLT 603 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRT-----GAPRN 416 + + + + +++ L+ + + R G + G Sbjct: 604 PKDSNFAGDLVRNLEG---ANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY 660 Query: 417 RRRSG 421 R R G Sbjct: 661 RERPG 665 >UniRef50_B3M5L4 GF23818 n=1 Tax=Drosophila ananassae RepID=B3M5L4_DROAN Length = 795 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 136/412 (33%), Positives = 209/412 (50%), Gaps = 9/412 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 F F +++A+ K + TPIQA A+P L+GRD+ G A+TG+GKT AF Sbjct: 260 PPKPVTSFGHFGFDEPLLKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAF 319 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 + +L+ + + + P LI+APTREL++QI+ +A+ + L + YGG Sbjct: 320 IWPLLMHLMDQKEL--QPGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGS 377 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 +Q K LE G +I++ T GR+ID K NL + +VLDEADRM+ +GF +R + Sbjct: 378 KWEQSKALEQGAEIVVATPGRMIDMVKMKATNLKRVTFLVLDEADRMFHMGFEPQVRSIC 437 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFY-PSNEE 242 + P R +LFSAT R+ LA + + + I + I + +F P+ + Sbjct: 438 NHVRPD--RQTLLFSATFKKRIERLARDVLTDPVRIVQGDLNEANQDITQSVFVFPNPLQ 495 Query: 243 KMR-LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K LL L++ +IF K E + +L + LL GD+ Q R +++ + Sbjct: 496 KWNWLLCHLVKFLSEGSVLIFVTKKADAETVANNLLVKEYNCLLLHGDMDQADRNKVITQ 555 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F + + DILVATDVAARGL IP + +V NYD+ D + + HRIGRTGRAG G++ +L Sbjct: 556 FKKKECDILVATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAFTLVT 615 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGA 413 ++ + + + P+ LM K R G R A Sbjct: 616 DKDKEFAGHLVRNLEG---ADQQVPEDLMELAMKSSWFRSSRFKQGKGRKPA 664 >UniRef50_Q0G0P8 Superfamily II DNA and RNA helicase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0P8_9RHIZ Length = 457 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 145/413 (35%), Positives = 215/413 (52%), Gaps = 5/413 (1%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 +T F F L + AL + TPIQ A+P LAGRD+ G AQTGTGKT AF Sbjct: 1 MTSTTFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFAL 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 H+L++ +ALI++PTRELAVQI L+E T + + +GG Sbjct: 61 PLLHHLMT--VGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVR 118 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q++ L GVDIL+ T GRL+D +Q I+L + ++LDEADRM D+GF++D+ + + Sbjct: 119 PQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGK 178 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 P R +M+FSAT+ + +L+ + + N + + V P T +I + +F K Sbjct: 179 CPDD--RQSMMFSATMPKPIEDLSKKILTNPQKVSVTPAVVTVEKIAQSVFSVPQRAKKH 236 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L + + R ++F TKH + L G + + G+ +Q R + L F G Sbjct: 237 WLIDFVSKNDTGRIVVFTRTKHGANRLTSDLDKAGIQALAIHGNKSQTARQKALGAFQDG 296 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 ++D+LVATD+ ARG+H+ ++HV N+DLP++ E YVHRIGRT RAG SG +I+L Sbjct: 297 EIDVLVATDIVARGIHVDDISHVVNFDLPEEPESYVHRIGRTARAGRSGQAIALVDPSER 356 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPR-TGNGPRRTGAPRNR 417 L I G + + + + R N R G PRNR Sbjct: 357 AKLKQIIKLTGIDLTPQATDYTVNVLAGELDADDGKRRGPRNQQPRNGRPRNR 409 >UniRef50_B8J1L5 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=B8J1L5_DESDA Length = 595 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 141/396 (35%), Positives = 209/396 (52%), Gaps = 11/396 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + L ++++A+E GF +PIQ LA+P LAG D GQAQTGTGKT AF Sbjct: 4 SFEELGLSRELLKAVEDMGFEEPSPIQVLAVPCLLAGNDAFGQAQTGTGKTAAFGLPILD 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQL 128 L +ALI+ PTRELA+Q+ + LA G+ + YGG ++QL Sbjct: 64 KL--------TPERNTQALILCPTRELAIQVAEELNKLAAHKRGVAILPIYGGQPIERQL 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GV +++GT GR++D+ K+ + L + VLDEAD M D+GF +DI + + P Sbjct: 116 RALAKGVQVVVGTPGRVMDHLKRGTLRLSQASMAVLDEADEMLDMGFREDIEAILEQTPA 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 + QR +LFSAT+ +REL+ + E + V + T I++ + +KM L Sbjct: 176 SCQR--VLFSATVPPAIRELSKRFLREPEMLTVAQKMLTVPAIEQIYYEVRPHQKMDALC 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L++ +A++F +TK +E+ HL G++ L G++AQ +R R++ F LD Sbjct: 234 RLLDSRAFHKALVFCSTKRGADEVTTHLQQRGYQSDSLHGNLAQSQRDRVMQRFRAEGLD 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATDVAARGL + V V NYD+P D E YVHRIGRTGRAG G + + + Sbjct: 294 VLVATDVAARGLDVDDVDAVINYDIPHDVEKYVHRIGRTGRAGRVGSAFTFVTMREHYKM 353 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 I I + + ++ L R Sbjct: 354 RDIIRCTRARITEGRLPSLRDVDNIRTSRLLDEVRQ 389 >UniRef50_C6E4K1 DEAD/DEAH box helicase domain protein n=9 Tax=Proteobacteria RepID=C6E4K1_GEOSM Length = 490 Score = 560 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 201/413 (48%), Positives = 266/413 (64%), Gaps = 4/413 (0%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF++ + +V + +++ GF CTPIQ ALPL L G+DVAGQAQTGTGKT FL S F Sbjct: 1 MKFTELKIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIF 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LLS PRALI+APTREL VQI DA+ L + TG + YGG Y KQ Sbjct: 61 TKLLSQAKTGGEH--HPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQR 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L++G DI+IGT GRLIDY KQ ++ ++ +V+DEADRM+D+GFI D+R++ RR+PP Sbjct: 119 DALKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPP 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 ++R N+LFSATL+ RV ELA+E MN E + V PEQ T R+++ L++ S +EK LL Sbjct: 179 YDKRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLL 238 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ + +R +IF NTK E + L A+ +++GDV Q+KR++IL +F G L Sbjct: 239 GLLRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLP 298 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 I++ATDVA+RG+HI V+HV NYDLP DCEDYVHRIGRT RAGA G +IS A E+ A + Sbjct: 299 IMIATDVASRGIHIEGVSHVINYDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYI 358 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 IE +I IP D + D + RPRT R G P +R RSG Sbjct: 359 EPIEDFIKQKIPTEWAEDDMFVHDYKRTK--PRPRTELPHGRGGKPGDRGRSG 409 >UniRef50_Q3AZR1 DEAD/DEAH box helicase-like n=2 Tax=Synechococcus RepID=Q3AZR1_SYNS9 Length = 458 Score = 560 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 155/420 (36%), Positives = 229/420 (54%), Gaps = 6/420 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 + + F L + V ++++ G+ + TPIQAL +P L G+D+ AQTGTGKT Sbjct: 16 LKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKT 75 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AF+ L A K Q +L++ PTRELA Q+ A A+ + L+ +G Sbjct: 76 AAFILPIIELL---RAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFG 132 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Q+K L+ GVDIL+ T GRL+D Q I ++V+VLDEADRM D+GFI+DI+ Sbjct: 133 GVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIK 192 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + +P R NM+FSAT S +++LA +N+ I+ + + I+ + Sbjct: 193 KVIEYLP--KNRQNMMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAPTIEHLVHPCDM 250 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 K+ LL LI+ + ++FA TKH +++ L R + G+ +Q R R L+ Sbjct: 251 ARKVDLLCHLIKTNKWKQVLVFARTKHGADKVVKILCHQHMRASAIHGNKSQGARTRALE 310 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F GD+ ILVATD+AARG+ I + +V N DLP+ EDYVHRIGRTGRAG +GH+ISL Sbjct: 311 GFKNGDIKILVATDIAARGIDIHQLPYVINLDLPNVAEDYVHRIGRTGRAGEAGHAISLV 370 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 E AL L AIE +IG+ +P +PL+ R P ++ P + ++ Sbjct: 371 AAEEALLLKAIEKFIGNPLPKVDVVGFEQKILKAEPLKQGGQRQ-RRPSQSARPGQKAKT 429 >UniRef50_Q0D1K3 Pre-mRNA-processing ATP-dependent RNA helicase prp5 n=34 Tax=Dikarya RepID=PRP5_ASPTN Length = 1181 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 134/432 (31%), Positives = 208/432 (48%), Gaps = 19/432 (4%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 QK+S L + ++ +++ G+ N T IQ+ A+P ++GRDV G A+TG+GKT+A Sbjct: 543 DVPKPVQKWSQCGLGVQTLDVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVA 602 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL F ++ + + P LIM PTRELA QIH D +P +A L+ AYGG Sbjct: 603 FLIPMFRHIKDQRPL--ENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGA 660 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQ---NHINLGAIQVVVLDEADRMYDLGFIKDI 179 Q+ L+ G +I++ T GR+ID NL + VVLDEADRM+D+GF + Sbjct: 661 PIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQV 720 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + P R +LFSAT + LA + +N I V + I + + + Sbjct: 721 MKIMANVRPD--RQTVLFSATFPRNMEALARKTLNKPVEIVVGGKSVVAPEITQIVEVRN 778 Query: 240 NEEKMRLLQTLI------EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQK 293 ++K L L+ +E RA+IF + + + L G+ + G Q Sbjct: 779 EDKKFVRLLELLGNLYSSDENEDARALIFVERQEAADTLLRELMRKGYPCMSIHGGKDQI 838 Query: 294 KRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGAS 353 R +++F G +L+AT VAARGL + + V NYD P+ EDYVHR GRTGRAG + Sbjct: 839 DRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNT 898 Query: 354 GHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT------GNG 407 G +++ E+ I + S ++ + ++ + + G G Sbjct: 899 GTAVTFLTEDQERFSVDIAKALKQSGQKVPEPVQQMVDSFLEKVKAGKEKASASGFGGKG 958 Query: 408 PRRTGAPRNRRR 419 R R+ R Sbjct: 959 LERLDQERDAAR 970 >UniRef50_Q4TVV3 Probable ATP-dependent RNA helicase DDX46 n=18 Tax=Eumetazoa RepID=DDX46_DANRE Length = 1018 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 124/414 (29%), Positives = 202/414 (48%), Gaps = 8/414 (1%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + + + KV+ AL+K + TPIQA A+P ++GRD+ G A+TG+GKT+AFL Sbjct: 336 PKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFL 395 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 F ++L + + + P A+IM PTRELA+QI + + +++ L++ YGG G Sbjct: 396 LPMFRHILDQRPVGEAE--GPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGI 453 Query: 125 DKQLKVLESGVDILIGTTGRLIDYA---KQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 +Q+ L+ G +I++ T GR+ID NL + VV+DEADRM+D+GF + Sbjct: 454 SEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMR 513 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + P R ++FSAT + LA ++ ++V +++ + E Sbjct: 514 IVDNVRPD--RQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEE 571 Query: 242 EKMRLLQTLIEEEWP-DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 +K L ++ IIF + + + + L + L G + Q R I++ Sbjct: 572 KKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIIN 631 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F G +LVAT VAARGL + + V NY P+ EDYVHR GRTGRAG G++ + Sbjct: 632 DFKNGACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFI 691 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 E A I + S + L T+ + + + +G Sbjct: 692 TEGQARYSGDILKALELSGSSVPAELEQLWTNFKEQQKAEGKIIKSSSGFSGKG 745 >UniRef50_C4V8Q7 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V8Q7_NOSCE Length = 528 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 132/409 (32%), Positives = 197/409 (48%), Gaps = 9/409 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 KF +V+ + K F + TPIQA P+ L G+D+ G AQTG+GKT++ Sbjct: 121 DVPHPYVKFEHAPFENEVLNNFKLKAFTSPTPIQAQGWPMALTGKDMVGIAQTGSGKTLS 180 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F+ + + + R + P L++APTREL +QI + ++ YGG Sbjct: 181 FVLPALIHARAQIPL--RSGDGPIVLVLAPTRELCLQIKDVFDEYCRFFNMRCTAVYGGV 238 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q + + G ++++G GRLID +Q ++ + +VLDEADRM D+GF ++ + Sbjct: 239 SSYTQKRDISMGCEVVVGCPGRLIDLNEQGALHFNRVTFLVLDEADRMLDMGFEPQLKKI 298 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSNE 241 P R +++SAT VR LA M N + + + KT +IK+ + + Sbjct: 299 IVNTNPD--RQTLMWSATWPKEVRRLAENYMKNFVQLTIGSVELKTNIKIKQIVSVIDSH 356 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 EK L + E+ ++ IIFANTK C+ + L+ G++ + GD +Q R RI+ + Sbjct: 357 EKANKLHESLNEKKNEKVIIFANTKRMCDNLEDDLSRRGYKAVAIHGDKSQNIRDRIISD 416 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAG-ASGHSISLA 360 F G +IL+ATDVAARGL I V V NYD P++ EDYVHRIGRT R G S S Sbjct: 417 FRSGYKNILIATDVAARGLDIKNVALVINYDFPNNIEDYVHRIGRTARGDVTEGLSHSFF 476 Query: 361 CEEY---ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGN 406 E A L I +P + R Sbjct: 477 TSENSACAKELVKILKEANQDVPSKLIDMSTTKNGGYNSRGGNYSRPYR 525 >UniRef50_A7HKQ8 DEAD/DEAH box helicase domain protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKQ8_FERNB Length = 571 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 135/389 (34%), Positives = 210/389 (53%), Gaps = 9/389 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLA-GRDVAGQAQTGTGKTM 61 ++F DF L +++ A++KKG+ T IQ + LP L+ +D+ QAQTGTGKT Sbjct: 12 DETKNYERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTA 71 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AF + + +A+I+ PTRELA+QI + + L +K+ YGG Sbjct: 72 AFGIPLLERI------DFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGG 125 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 +KQ K LE GVDI++GT GR+ID+ ++ ++L ++ +VLDEADRM D+GF+ D+ Sbjct: 126 QSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLE 185 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + +R + LFSAT+ + ++A + M ++ ++ T ++ F + Sbjct: 186 IIKRTGENKR--TFLFSATMPKEIVDIARKFMKEYIHVSTVKDELTTENAEQLYFEVDEK 243 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 +K+ LL +I+ I+F TK +EI L G+ L GD +Q +R R+LD+ Sbjct: 244 DKLPLLCRIIDMNPDFYGIVFCQTKLEVDEISKKLLDLGYNADGLHGDYSQYQRERVLDK 303 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F + L ILV TDVAARG+ I +THV NY +P D E YVHRIGRTGRAG G +I+ Sbjct: 304 FRKKQLRILVTTDVAARGIDIDGLTHVINYSVPRDPEYYVHRIGRTGRAGKKGFAITFVT 363 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALM 390 + + ++ + I + Sbjct: 364 RDDYFHFARVKRFAKAKIIKDSIPQVEDI 392 >UniRef50_A0RP33 Putative ATP-dependent RNA helicase RhlE n=2 Tax=Campylobacter fetus RepID=A0RP33_CAMFF Length = 624 Score = 559 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 147/415 (35%), Positives = 218/415 (52%), Gaps = 7/415 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FSDF L ++EAL++ + T IQ +A+P + G+D+ A+TGTGKT AF Sbjct: 1 MLFSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L S R Q R L++ PTRELA Q+ + + A+ K +GG Q+ Sbjct: 61 EKLSSKERNKKRP--QTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQI 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+SG+DI++ T GRL+D A QN ++L I +V DEADRM+D+GFI DI+ + + +P Sbjct: 119 QALKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPE 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+LFSAT V L + + I++E + T I + + ++KM LL Sbjct: 179 --KRQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDKKMELLN 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 + E D+A++F TK ++ +L G V L GD +Q R + L++F G Sbjct: 237 EVFGVESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTK 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARGL I + V N +LP+ EDYVHRIGRTGRAG G +ISL C + L Sbjct: 297 ILVATDIAARGLDIKELPFVINLELPNVPEDYVHRIGRTGRAGNDGVAISLVCVDEFKFL 356 Query: 369 PAIETYIGHSIPVSKYNPDAL---MTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 IE I + ++ + P ++ R G +++ Sbjct: 357 IDIEKLIDKKLIRESFSGFEADLRVKPQPIRRGQNMNKSSERDDRNGNKIDKKER 411 >UniRef50_Q2PZC2 Vasa protein n=16 Tax=Neoptera RepID=Q2PZC2_APIME Length = 630 Score = 559 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 130/390 (33%), Positives = 199/390 (51%), Gaps = 12/390 (3%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + F L V++ ++K G+ TP+Q ALP+ + GRD+ AQTG+GKT A Sbjct: 190 NVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAA 249 Query: 63 FLTSTFHYLLSHPA--IADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 F + LL + +P+ +I++PTREL +QI + + LK +AYG Sbjct: 250 FAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNSILKTVVAYG 309 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Q L +G IL+ T GRL+D+ ++ + ++Q +VLDEADRM D+GF+ I Sbjct: 310 GTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLPSIE 369 Query: 181 WLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP 238 + M P +R ++FSAT V+ LA +NN ++ V +++ + Sbjct: 370 KMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACSDVEQNFYEV 429 Query: 239 SNEEKMRLLQTLIEEEWP----DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKK 294 + +K LL+ ++E E ++F K + + I L+ + + + GD Q++ Sbjct: 430 ARNKKKDLLKEILERENDSGTLGGTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQ 489 Query: 295 RLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG 354 R L +F G + ILVAT VAARGL I V+HV NYDLP ++YVHRIGRTGR G G Sbjct: 490 REEALADFKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRG 549 Query: 355 HSISLACEEY----ALNLPAIETYIGHSIP 380 + S E +L I S+P Sbjct: 550 RATSFFDPEEDAPLRGDLVRILKQANQSVP 579 >UniRef50_Q5ZT20 ATP-dependent RNA helicase n=4 Tax=Legionella pneumophila RepID=Q5ZT20_LEGPH Length = 589 Score = 559 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 146/398 (36%), Positives = 216/398 (54%), Gaps = 10/398 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + FS F + +ALE F +PIQA +PL L GRD AQTGTGKT AF Sbjct: 1 MNQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAF 60 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGD 122 L +++ +ALI+APTRELA+Q+ E L++ + + + GG Sbjct: 61 ALPILQNLS-------PEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQ 113 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y +QLK L SG +++GT GR++D+ + + L ++ +LDEAD M +GFI+D+ + Sbjct: 114 EYGRQLKQLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETI 173 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++P LFSAT+ YR+R++A +N+ IE+ E T I++ + S + Sbjct: 174 LEKLPEKK--QMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQ 231 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K L ++E E I+F TK EE+ L G R + GD+ Q R RI+ +F Sbjct: 232 KPDALIRVLEVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQF 291 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 +G +DILVATDVAARGL + VTHV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 292 KQGAIDILVATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTP 351 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 + + + +IE + I + D ++ + ++ Sbjct: 352 KESRLISSIERHTRQRIEKVQVPNDHMIQMARQQRFMS 389 >UniRef50_Q9GNP1 Vasa homolog n=25 Tax=Eumetazoa RepID=Q9GNP1_CIOSA Length = 770 Score = 559 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 125/422 (29%), Positives = 204/422 (48%), Gaps = 8/422 (1%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + F L V+ +++ + TP+Q ++P+ A RD+ AQTG+GKT A Sbjct: 307 NAPKSIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMACAQTGSGKTAA 366 Query: 63 FLTSTFHYLLSHPAIADR--KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 FL L+++ + + + PRA+++ PTREL QI +A + T ++ +AYG Sbjct: 367 FLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEARKFSRGTVVRPVVAYG 426 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G + Q++ L+ G ILI T GRL+D+ + + L ++ V+LDEADRM D+GF +IR Sbjct: 427 GTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDEADRMLDMGFETEIR 486 Query: 181 WLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFY 237 L MP + R ++FSAT ++ LA + + + ++ V + + + Sbjct: 487 KLASSPGMPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTVGRVGGACTDVTQSIIQ 546 Query: 238 PSNEEKMRLLQTLIEE--EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKR 295 ++K L LI + E R ++F TK + + L+ +G + GD Q++R Sbjct: 547 VDQDDKRAKLLELISDVAETRSRTLVFVETKRGADFLACMLSQEGCPTTSIHGDRLQQER 606 Query: 296 LRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGH 355 + L +F IL+AT VAARGL IP V HV NYD+P + ++YVHRIGRTGR G G Sbjct: 607 EQALRDFKSAVCPILIATSVAARGLDIPKVEHVINYDMPKEIDEYVHRIGRTGRCGNLGR 666 Query: 356 SISLAC-EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 + + + ++ + + + G R Sbjct: 667 ATTFYDNNKDGELARSLVKILSEAQQEVPGWLEECAESAVGSSFGKEGGFGGRDFRKRGG 726 Query: 415 RN 416 RN Sbjct: 727 RN 728 >UniRef50_Q54QS3 Probable ATP-dependent RNA helicase ddx3 n=3 Tax=Eukaryota RepID=DDX3_DICDI Length = 712 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 134/423 (31%), Positives = 203/423 (47%), Gaps = 12/423 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 F+D L ++ ++ + TP+Q ALP+ L RD+ AQTG+GKT AFL Sbjct: 245 PLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFP 304 Query: 67 TFHYLLSHPAIADR--------KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLA 118 +L A + PRAL++APTRELA QI +A + + + + Sbjct: 305 IISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVI 364 Query: 119 YGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKD 178 YGG Q+ L+ G DIL+ TTGRL+D + ++L I+ +VLDEADRM D+GF Sbjct: 365 YGGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQ 424 Query: 179 IRWLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 IR + MP R ++FSAT +++ LA + + N +++V T I + + Sbjct: 425 IRQIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGTT-QNITQRIE 483 Query: 237 YPSNEEKMRLLQTLIEE-EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKR 295 Y E+K L + + +IF TK C+ + L + GD+ Q +R Sbjct: 484 YVVEEDKNSYLLDYLSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPER 543 Query: 296 LRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGH 355 L F LVATD+A+RGLHI V V N+DLP D YVHRIGRTGRAG G Sbjct: 544 ENALQSFRSFATPFLVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGL 603 Query: 356 SISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 +IS E+ + + S + ++ +L + ++ + ++ Sbjct: 604 AISFFNEKNKPVGAELLKLMKASNQDIPDWFEKMVHNLRMSKGPSNSKSNSPFNKSYNSH 663 Query: 416 NRR 418 + R Sbjct: 664 HNR 666 >UniRef50_Q11UP8 ATP-dependent RNA helicase (Cold-shock DEAD-box protein A) n=2 Tax=Bacteria RepID=Q11UP8_CYTH3 Length = 580 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 148/394 (37%), Positives = 227/394 (57%), Gaps = 10/394 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F D L P+VVEA+E G+ TPIQ +P+ + G+D+ GQAQTGTGKT AF Sbjct: 1 MLFKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAI 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQ 127 ++ D +NQ ++LI+ PTRELA+Q+ + + L++ GL++ YGG+ ++Q Sbjct: 61 EHV-------DISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQ 113 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L++G I++GT GR+ID+ + +N + ++LDEAD M ++GF +DI + R+P Sbjct: 114 IRDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLP 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R +LFSATL+ + LA NN E I++E ++ T +++ + N +K ++ Sbjct: 174 E--ERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFYYLVKNSQKTEIV 231 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +I+ +IF NTK + EE+ L A GH L GD Q+ R ++ +F +G Sbjct: 232 TQIIDLNNLQLMLIFCNTKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLA 291 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 +ILVATDVAARG+ + V V NYD+P D E+YVHRIGRTGRAG G S +L + Sbjct: 292 NILVATDVAARGIDVTGVDAVINYDVPLDIENYVHRIGRTGRAGQLGKSFTLVTSDEKYK 351 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE Y +I ++ + K TR Sbjct: 352 LRDIERYTKATIEKAETPTRQELVAYKKDKLATR 385 >UniRef50_A8IAJ3 Helicase n=4 Tax=Alphaproteobacteria RepID=A8IAJ3_AZOC5 Length = 582 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 159/420 (37%), Positives = 213/420 (50%), Gaps = 9/420 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T FS+ L KV+ A+ G+ TPIQA A+P LA RDV G AQTGTGKT AF Sbjct: 59 TSSDPMSFSELGLSEKVLSAVAATGYTTPTPIQAQAIPHVLARRDVLGLAQTGTGKTAAF 118 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 L + PR LI+ PTRELA Q+ + + L + L GG Sbjct: 119 TLPMLTLL----EQGRARARMPRTLILEPTRELAAQVEENFVRYGKNHKLNVALLIGGVS 174 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 + Q L GVD+LI T GRL+D+ ++ + L I+V+V+DEADRM D+GFI DI + Sbjct: 175 FGDQDTKLLRGVDVLIATPGRLLDHVERGRLLLSGIEVLVIDEADRMLDMGFIPDIERIC 234 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP--SNE 241 + +P R + FSAT+ ++ L + ++N +EV I + L + Sbjct: 235 KLVPFT--RQTLFFSATMPPEIQRLVSQFLSNPVRVEVSKPASANTSITQLLVASGREDY 292 Query: 242 EKMRLLQTLIEE-EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EK L+ LI + I+F N K + L G V L GD+ Q R + LD Sbjct: 293 EKRETLRELIRNADQLQNGIVFCNRKRDVAVVHRSLQKHGFNVVCLHGDMDQHARTQALD 352 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F G+ +LVA+DVAARGL IPAV+HVFNYD+P EDYVHRIGRTGRAG +G +I L Sbjct: 353 QFRTGEATLLVASDVAARGLDIPAVSHVFNYDVPHHSEDYVHRIGRTGRAGRTGTAIMLV 412 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 + A +L AIE IG++IP + R R RS Sbjct: 413 THDDAKSLAAIEKLIGNAIPWQGEPLGEAPPREKRSRGGDRREERGERSERNKRSGRGRS 472 >UniRef50_Q1MY97 DEAD/DEAH box helicase-like protein n=1 Tax=Bermanella marisrubri RepID=Q1MY97_9GAMM Length = 614 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 135/400 (33%), Positives = 212/400 (53%), Gaps = 10/400 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + F+ L ++ A+E++G+ +PIQ ++P L G+DV G AQTGTGKT AF Sbjct: 1 MSESSTGFASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAF 60 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGD 122 +V +P+ L++APTRELA Q+ E ++ + +K+ YGG Sbjct: 61 TLPLLAR-------TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGS 113 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 + Q + L+ G ++GT GR++D+ ++ + L I+ VVLDEAD M +GFI D+ W+ Sbjct: 114 DFGSQFRALKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWV 173 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 ++P +R LFSAT+ +++ +A + + I ++ + T I+++ + + Sbjct: 174 LDQVPE--KRQIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKYWLVKGVD 231 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K + L + E D ++F TK EE+ ++ + G R L GDVAQ +R R +D Sbjct: 232 KNQALLRICETSEFDAMMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQRERAVDRL 291 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 +G +D+LVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG +I Sbjct: 292 KKGQVDMLVATDVAARGLDVERISHVVNYDIPYDAESYVHRIGRTGRAGRSGEAILFVRP 351 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402 L IE I + + + R Sbjct: 352 RERRMLSTIERVTRKKIQQIELPTAKEVNAKRRDQFKVRA 391 >UniRef50_C8WL27 DEAD/DEAH box helicase domain protein n=3 Tax=Eggerthella lenta DSM 2243 RepID=C8WL27_EGGLE Length = 508 Score = 559 bits (1441), Expect = e-158, Method: Composition-based stats. Identities = 158/420 (37%), Positives = 223/420 (53%), Gaps = 12/420 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 Q F+D L + A+E+ G+ N TP+Q A+PL L GRD+ A TGTGKT AFL Sbjct: 1 MQNFADLGLSEAALAAVERLGYENPTPVQLQAIPLVLEGRDLIAAASTGTGKTAAFLLPI 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L R PR L+++PTRELA QI + TG + +GG Y Q Sbjct: 61 LSTL----PRGKRGKRAPRVLVVSPTRELAQQISQTCMQITRKTGHYVTTVFGGTPYGPQ 116 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + + G D+LI T GRL D + ++LG I+ +VLDEADRM D+GF+ + + P Sbjct: 117 INEIRRGTDVLIATPGRLNDLMNKGVVDLGGIKSLVLDEADRMLDMGFLPAVTTIVDATP 176 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R +LFSAT+ + +++ +N+ +E+ +T +++ + +N +K LL Sbjct: 177 AD--RQTLLFSATIDHSIQKNLGSLLNDPAVVEIARNGETAQTVEQFMMPIANFKKPELL 234 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 Q L+EE+ DR I+FA TK+R E+ L G+R + D +Q +R R LD F RG Sbjct: 235 QALLEEKGSDRVIVFARTKNRTEDCAEALCDAGYRAESIHSDKSQGQRKRALDNFRRGRT 294 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDV ARG+ +P V HV N+DLPD EDYVHRIGRTGRAG G ++S E Sbjct: 295 SILVATDVLARGIDVPDVDHVINFDLPDMPEDYVHRIGRTGRAGEQGFAVSFVTRESRRT 354 Query: 368 LPAIETYIGHSIPVSKYNPDAL------MTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 + IE IG ++P+ + L P + R GA R+ +R G Sbjct: 355 MSDIEKLIGKNVPLMELETYELDMTVLEKGKKGAPKKGGYKGNKGSGRPAGAKRSDKRGG 414 >UniRef50_Q6AMK6 Probable ATP-dependent RNA helicase n=1 Tax=Desulfotalea psychrophila RepID=Q6AMK6_DESPS Length = 632 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 156/391 (39%), Positives = 217/391 (55%), Gaps = 9/391 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+DF L +V L K GF TPIQ A+PL LAG D+ GQAQTGTGKT AF + Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 + D +AL++APTRELA Q+ + G + + YGG Y Q+ Sbjct: 117 I-------DFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGG 169 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L G +++GT GRL+D +Q + L ++ +VLDEAD M +GFI DI + + P Sbjct: 170 LRRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKD- 228 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R MLFSATLS RV +A +++ E I + P+Q G I++ + +N +K+ + + Sbjct: 229 -RQTMLFSATLSSRVMSIANRYLHSPESISISPKQMIGSSIEQRYYLINNSDKIAAITRV 287 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 E E + A+IFA T+ E+ L + G L+GD++Q+ R R+L F +G + +L Sbjct: 288 FEVETVESALIFARTRATVSELANELISRGFAAEGLSGDLSQEARTRVLSRFKKGQIKVL 347 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARGL I ++HVFNYDLP+D E YVHRIGRTGRAG SG +ISL Sbjct: 348 VATDVAARGLDIDDISHVFNYDLPEDPEVYVHRIGRTGRAGRSGTAISLVTLRDRWMHRR 407 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 IE Y G + + + + L R Sbjct: 408 IEQYTGKKLIKGELPTVEQIEEHRNTQFLER 438 >UniRef50_B6R5V0 ATP-dependent rna helicase, dead/deah box family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5V0_9RHOB Length = 453 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 146/414 (35%), Positives = 216/414 (52%), Gaps = 5/414 (1%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F + AL+ KG+ TPIQ A+P L G+D+ G AQTGTGKT AF Sbjct: 1 MTDFDKLGVAKPFQIALKSKGYSEPTPIQENAIPYILDGKDLLGLAQTGTGKTAAFAVPL 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 LL A K R+LI+ PTRELA QI + + A T + GG + Q Sbjct: 61 LQRLLESRYRAAPKS--VRSLILTPTRELADQITKNIKAYAGRTKMYTSCVVGGVPFPPQ 118 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L+ G+D+L+ T GRL+D ++N ++ +++ VLDEAD+M DLGFI ++ + +P Sbjct: 119 FHALQRGLDVLVATPGRLLDLHRKNGVSFDELEIFVLDEADQMLDLGFIAELEEIAYLLP 178 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R + FSAT+ +R+L+ + N + P T + +++ + + K LL Sbjct: 179 --KKRQTLFFSATMPREIRDLSERFLTNPVEVSTAPPATTVETVTQQIAHLEKDAKFPLL 236 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + L+E++ +RA++F TK + L ADG + GD++Q +R + LD+F RG L Sbjct: 237 KELLEKDECERALVFTLTKKGSARLAARLNADGVPAEAIHGDMSQAERQKTLDKFKRGKL 296 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATDVAARG+ + ++HV N+D+P+ E+YVHRIGRT RAG SG +I+ E Sbjct: 297 KTLVATDVAARGIDVSDISHVINFDMPNATENYVHRIGRTARAGKSGTAITFCLPEDRGM 356 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 L AI+ IG I PK R G + PR +G Sbjct: 357 LRAIQKLIGKKIAEMDGFTFFPSDREPKSARSNAQVAGKR-AKGSGPRKGPGNG 409 >UniRef50_Q8SRB2 ATP-dependent RNA helicase DBP2 n=18 Tax=Fungi/Metazoa group RepID=DBP2_ENCCU Length = 495 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 144/425 (33%), Positives = 212/425 (49%), Gaps = 20/425 (4%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 + QKF + +VV +L +KGF T IQ P+ L+GRD+ G AQTG+GKT+ Sbjct: 80 TNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTL 139 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 +F+ + + R+ + P L++APTREL +QI + L+ YGG Sbjct: 140 SFILPALVHAKDQQPL--RRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGG 197 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q++ L G +++I T GRLID Q H L + +VLDEADRM D+GF +R Sbjct: 198 ASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRK 257 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSN 240 + + R +++SAT VR LA MN + V E+ KT +IK+ + S Sbjct: 258 IIPKT--NANRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNSKIKQIVEVCSG 315 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EK L +++ D+ I+F N K C+++ L G+ L GD +Q R ++LD Sbjct: 316 REKEDKLIGVLDNFKGDKVIVFCNMKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLD 375 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAG-ASGHSISL 359 +F G IL+AT+VA RGL + V V N+D P CEDYVHRIGRT R G S + Sbjct: 376 DFRSGRRPILIATEVAGRGLDVNDVKLVINFDFPGSCEDYVHRIGRTARGNTKEGISHTF 435 Query: 360 AC---EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 + A L + ++P +DL +R++ R G+ R G Sbjct: 436 FTVGDKANARELIRMLREANQTVP----------SDLEDMVRVSNDRYGSRSTRHGYD-Y 484 Query: 417 RRRSG 421 R R+G Sbjct: 485 RGRAG 489 >UniRef50_C6Q9Z2 DEAD/DEAH box helicase domain protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9Z2_9RHIZ Length = 657 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 144/412 (34%), Positives = 215/412 (52%), Gaps = 7/412 (1%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 LT + F F + AL + G+ TPIQ ALP L GRD+ G A+TG+GKT F+ Sbjct: 22 TLTIENFEAFGFAEPLSRALTQCGYVTPTPIQVQALPPQLEGRDLLGMAETGSGKTATFV 81 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 + S ++ Q AL++APTRELA+QI + LA ++ + GG Sbjct: 82 LPLLQKIASQ--NSEPAPKQVLALVLAPTRELAIQIDQEVASLARNMRIRRAVVLGGVSK 139 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q+ L+ GV +L+ T GRL+D +L ++ +VLDEADRM+D+GFI+DI+ + Sbjct: 140 GPQINALKRGVHVLVATPGRLLDLINMRTCDLSRVETLVLDEADRMFDMGFIRDIKKIVA 199 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P A R LFSAT+ +++ A++ + +++ + RI +++ EK Sbjct: 200 MLPEA--RRTALFSATMPVEIKKFAYDILKEPYRVDLSSKSVVVDRIDQKVMIVRTTEKQ 257 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L T++ +E R I+F TK + + L G G+ AQ R R L++F Sbjct: 258 SRLHTILADEACKRVIVFTRTKRGADRVAERLGMAGISASAFHGNKAQNARQRALNDFMM 317 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G + +LVATD+AARG+ + +THV N+D+P D E YVHR+GRT R G SG +ISL Sbjct: 318 GHIRVLVATDIAARGIDVSNITHVVNFDMPLDPETYVHRVGRTARKGNSGIAISLCDPGE 377 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 + AIE + + V LP P R R GPRR G ++ Sbjct: 378 RQEITAIERMMKQKLEVIADVGGEA---LPMPERRQHHRAETGPRRDGDRQH 426 >UniRef50_Q2RQT0 DEAD/DEAH box helicase n=59 Tax=root RepID=Q2RQT0_RHORT Length = 799 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 159/418 (38%), Positives = 227/418 (54%), Gaps = 16/418 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F+D L P+ + A+E+ G+ TPIQ A+P GRDV G AQTGTGKT +F Sbjct: 1 MTFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMI 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L S K PR+LI+APTRELA Q+ + + L + L GG+ ++Q Sbjct: 61 DILAS----GKAKARMPRSLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQ 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 KVL+ GVD+LI T GRLID ++ I L ++V+V+DEADRM D+GFI D+ + +P Sbjct: 117 KVLDRGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLP- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R + FSAT+ +R LA + N + + +EP QK +++ L EK L+ Sbjct: 176 -KIRQTLFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALR 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ E A IF N K + ++ L+ G + L GD+ Q R L++F R ++ Sbjct: 235 QLLRRETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQ 294 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ++V +DVAARG+ + V+HVFN+D+P EDY+HRIGRTGRAG G + +LA E A L Sbjct: 295 LMVCSDVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYL 354 Query: 369 PAIETYIGHSIPVSKY----------NPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 AIE +G +IP A+ D +P R + R G RR+G Sbjct: 355 RAIENLLGKTIPPDPQLELSDVAVEDVALAVAEDDRRPKRGGKGRPERGARRSGRGSA 412 >UniRef50_Q2NB74 DNA and RNA helicase n=7 Tax=Alphaproteobacteria RepID=Q2NB74_ERYLH Length = 492 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 154/421 (36%), Positives = 217/421 (51%), Gaps = 10/421 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 +T F L V++AL+ KG++ TPIQA A+P L GRD+ G AQTGTGKT AF+ Sbjct: 1 MTITTFDQLGLSQPVLQALDMKGYNEPTPIQAQAIPPVLEGRDLLGIAQTGTGKTAAFML 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + L A R L++APTRELA QI A+ GLK+ GG Sbjct: 61 PSIDRLRE--ADNQTPFKSCRMLVLAPTRELAGQIAQSAKDYGAMAGLKVHSIVGGTSVG 118 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 K L G DIL+ T GRL+D Q L A++++VLDEAD+M DLGFI +R + Sbjct: 119 KDRNKLHRGTDILVATPGRLLDLIDQKAFKLNAVEILVLDEADQMLDLGFIHALRQINDL 178 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P +R + FSAT+ +++EL + N + V P T RI + LF +EK Sbjct: 179 VPA--ERQTLFFSATMPKQIQELVGKYCRNPVKVSVTPAATTAERIDQYLFMVQQDEKQA 236 Query: 246 LLQTLIEEE-----WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 L++ +++ +R ++F TKH + + L G + G+ +Q +R R LD Sbjct: 237 LIEMILKGRHAVPGKQERILVFTRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRALD 296 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 EF R IL+ATDVAARG+ IP V+HV NY+LP+ E YVHRIGRT RAG G +I+ Sbjct: 297 EFKRAKTPILIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIAFC 356 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 E+ L I+ + + R + GPR P+ R++ Sbjct: 357 AEDERAYLKDIQKNTDAEFDRLPLP-ENFRAVVEGVGPTKREQKQRGPRIKPKPKARKQG 415 Query: 421 G 421 G Sbjct: 416 G 416 >UniRef50_A1SAL1 ATP-dependent RNA helicase rhlB n=142 Tax=Gammaproteobacteria RepID=RHLB_SHEAM Length = 439 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 272/421 (64%), Positives = 343/421 (81%), Gaps = 1/421 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+THLT+QKF+D L +V +AL + GF +CTPIQAL+LP+ L +D+AGQAQTGTGKT Sbjct: 1 MSETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +AFL +TF++LL+ P R++NQPRA++MAPTRELA+QI DA L++ +GLK+G+ YG Sbjct: 61 LAFLVATFNHLLTTPVPEHRQLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYG 120 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G+GY+ Q KVL+ GVD+LIGTTGR+IDY +Q INLGAIQ VVLDEADRM+DLGFIKDIR Sbjct: 121 GEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQAVVLDEADRMFDLGFIKDIR 180 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 +LF RMP A +RLNMLFSATLS +V+ELA++ MN+ +E+ PE+KT IKEE+FYPS Sbjct: 181 FLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSM 240 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 E+K++LL +LIEE+WP++AI+FANTK++CE +W L ADGHRVGLLTGDV QKKRL+IL+ Sbjct: 241 EDKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILE 300 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +FT+ +LDILVATDVAARGLHI V+HV+NYDLPDDCEDYVHRIGRTGRAG G S+S A Sbjct: 301 QFTQSELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFA 360 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 CEEYALNLPAIE YI HSIPV+ Y+ DAL+ D+P P+++ R G + R S Sbjct: 361 CEEYALNLPAIEDYIKHSIPVTSYDRDALI-DIPPPVKIHRKPHAGGRNLRDRNGSPRPS 419 Query: 421 G 421 G Sbjct: 420 G 420 >UniRef50_B4MZE1 GK18312 n=1 Tax=Drosophila willistoni RepID=B4MZE1_DROWI Length = 1424 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 121/383 (31%), Positives = 197/383 (51%), Gaps = 7/383 (1%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 + F + L +++ ++K + TPIQ +++P+ AGRD+ AQTG+GKT Sbjct: 1006 ENPPKPVKTFEEAKLRDILMDNIKKSAYTVPTPIQKVSIPVISAGRDLMACAQTGSGKTA 1065 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AFL +++L + ++ +P+A+IM+PTRELAVQI +A A + LK+ + YGG Sbjct: 1066 AFLLPILNHILDKGY--ELEIGKPQAIIMSPTRELAVQIFNEARKFAHNSYLKITIVYGG 1123 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q + + G ILI T GRL+D+ ++ I + VVLDEADRM D+GF + +R Sbjct: 1124 TSVKYQNESITKGCHILIATPGRLLDFVERTFITFEDTRFVVLDEADRMLDMGFSESMRK 1183 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + ++FSAT ++ +A E + + ++ + + + ++ Sbjct: 1184 IITHPTMRKEHQTLMFSATFPEEIQRMAGEFLRDYVFVTIGVIGGACSDVTQTIYEVDKF 1243 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K L ++ + I+F TK + + + + GD Q +R + L E Sbjct: 1244 NKRAKLMEILRDGADG-TIVFVETKRGADFLASFFSETEFPTTSIHGDRLQSQREQALRE 1302 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +L+AT VA+RGL I V+HV NYD+P +DYVHRIGRTGR G +G + S Sbjct: 1303 FKSGKMKVLIATSVASRGLDIKNVSHVINYDMPSTIDDYVHRIGRTGRVGNNGRATSFFD 1362 Query: 362 EEYAL----NLPAIETYIGHSIP 380 + +L I G +P Sbjct: 1363 SDKDRALAGDLVKILEGSGQEVP 1385 >UniRef50_C4LZM8 DEAD/DEAH box helicase, putative n=4 Tax=Entamoeba RepID=C4LZM8_ENTHI Length = 578 Score = 557 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 134/412 (32%), Positives = 214/412 (51%), Gaps = 16/412 (3%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T + F D L ++ + K GF++ P+Q +P+ L RD+ AQTG+GKT AFL Sbjct: 129 TIETFYDIDLGEELDHNIFKAGFYHPMPVQKATIPIVLDKRDLMSCAQTGSGKTAAFLFP 188 Query: 67 TFHYLLSHPAIADRKVNQ------PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +L +P + + P ALI+APTREL QI+ +A E T ++ YG Sbjct: 189 IISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVRFTEDTPIRSVCVYG 248 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Q++ + G DIL+ T GRL+ + ++ ++L +++ ++ DEADRM D+GF IR Sbjct: 249 GSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLDMGFEPQIR 308 Query: 181 WLFR--RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP 238 + MPP +R ++FSAT +++ LA + +++ +I V T I++ + + Sbjct: 309 EICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVFITVGRAGSTVESIQQIILWV 368 Query: 239 SNEEKMRLLQTLIEEE--WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 E K + ++ E + +IF TK + + +L G++V + GD +Q R Sbjct: 369 EEEIKQEAILDVLGEFAGKGQKTVIFVETKRGADILENYLYDHGYKVDSIHGDRSQADRD 428 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 L F + +LVATDVA+RGL IP + V NYD+P++ E YVHR+GRTGRAG G + Sbjct: 429 FSLKRFKENVIQLLVATDVASRGLDIPDIEVVINYDMPNEIESYVHRVGRTGRAGKKGTA 488 Query: 357 ISLACEEYALN---LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 I+ E+ L ++ +IP + + KP R R G Sbjct: 489 ITFINEKTQNLIPPLVSLLEEAKQTIP---DWLEEKAQEYRKPFGSKRGRKG 537 >UniRef50_A6V0P4 ATP-dependent RNA helicase RhlB n=15 Tax=Pseudomonadaceae RepID=A6V0P4_PSEA7 Length = 529 Score = 557 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 174/395 (44%), Positives = 241/395 (61%), Gaps = 2/395 (0%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + + +F DF L P ++ A+ GF CTPIQA L TL G+D G+AQTGTGKT A Sbjct: 135 EPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAA 194 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL S LL P +R + +PRALI+APTREL VQI DA L + TGL + GG Sbjct: 195 FLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGM 254 Query: 123 GYDKQLKVLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 +DKQLK LE+ DIL+ T GRL+D+ ++ ++L ++V+VLDEADRM D+GFI +R Sbjct: 255 DFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQ 314 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + R+ P +R +LFSAT + V LA + + +E+EPE +++ ++ + Sbjct: 315 IIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGS 374 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 +K +LL L+ + +R ++FAN K I L DG ++GDV Q KR+R L+ Sbjct: 375 DKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEG 434 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +LVATDVA RG+HI ++HV N+ LP+D +DYVHRIGRTGRAGASG SIS A Sbjct: 435 FREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAG 494 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKP 396 E+ A LP IE +G I P L+ +P+ Sbjct: 495 EDDAFALPPIEELLGRKITCE-MPPAELLKPVPRK 528 >UniRef50_Q0W8H7 ATP-dependent RNA helicase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8H7_UNCMA Length = 497 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 147/396 (37%), Positives = 220/396 (55%), Gaps = 9/396 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 KF++ L P +V A+ + GF TPIQ A+PL + G+D+ GQA+TGTGKT AF Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVE 62 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + + L++ PTRELAVQ+ + + + G++ YGG + Q+K Sbjct: 63 AI-------RPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVK 115 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE I++GT GRL+++ ++ ++ I++ VLDEAD+M D+GFI + + +++P Sbjct: 116 ALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPE- 174 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 +R +LFSATLS V+ LA + + + E IE E E T + ++K L Sbjct: 175 -RRQTLLFSATLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMPEKQKFEALTR 233 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L+++E P+ AI+F T+ R E+ L G+ L GD+ Q +R LD+F G++ I Sbjct: 234 LLDQEKPELAIVFVATRIRVGELAKALVERGYHALGLHGDLLQYQRENTLDKFKAGEVSI 293 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL I VTHV+N+D+P D + YVHRIGRTGRAG +G + + + L Sbjct: 294 LVATDVAARGLDIQGVTHVYNFDIPRDPDSYVHRIGRTGRAGNAGTATTFVTPKDKTALE 353 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 AIE I H I A T+ + + R Sbjct: 354 AIEQAIDHQITSKPAPGGAESTEKNIEAVIEKIRGE 389 >UniRef50_C7MN05 DNA/RNA helicase, superfamily II n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MN05_CRYCD Length = 551 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 154/425 (36%), Positives = 214/425 (50%), Gaps = 20/425 (4%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F D L K + A++ G+ + TP+Q A+P LAGRDV A+TGTGKT AF T Sbjct: 2 SKTFHDLGLSEKALAAVDLLGYTDPTPVQEQAIPAVLAGRDVIAAAKTGTGKTAAFSLPT 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L R P LI+ PTRELA+QI + +A+ +G ++ GG Y+ Q Sbjct: 62 MDRL-----GHARHGQGPLLLIVTPTRELALQIESVCRTIAKRSGHRVTCVVGGVSYNPQ 116 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + L G D+LI T GRLID Q+ +L ++ +VLDEADRM D+GF+ D+R + P Sbjct: 117 IDSLRRGTDVLIATPGRLIDLMNQDAAHLNQVETLVLDEADRMLDMGFLPDMRRIVAACP 176 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 QR +LFSAT+ + + +NN ++E+ +T I++ + K LL Sbjct: 177 --TQRQTLLFSATIDSAIEDNMAHLLNNPVFVEIAHRGETADTIEQYRIPVDHRHKNDLL 234 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+ E R I+FA T+HR + L G V + D +Q +R R ++ G Sbjct: 235 IALLNERGGTRIIVFARTRHRVDTCVRKLRKAGFAVEPIHSDRSQNQRKRAIEALEAGKC 294 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 DILVATDV ARG+ IP V +V N D+PD EDYVHRIGRTGRAG +G +IS E Sbjct: 295 DILVATDVLARGIDIPNVNYVVNLDMPDQVEDYVHRIGRTGRAGEAGCAISFVTPENKAI 354 Query: 368 LPAIETYIGHSIPVSKYNPDAL-------------MTDLPKPLRLTRPRTGNGPRRTGAP 414 L I+ IG IP P T R ++ + Sbjct: 355 LRDIQKLIGKDIPEMSVESFDSSASDNALAAKATRANAQNDPELATAAREDKSRKKAKSS 414 Query: 415 RNRRR 419 R+ RR Sbjct: 415 RSSRR 419 >UniRef50_C6ATS7 DEAD/DEAH box helicase domain protein n=15 Tax=Alphaproteobacteria RepID=C6ATS7_RHILS Length = 580 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 150/389 (38%), Positives = 217/389 (55%), Gaps = 5/389 (1%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T F + ++ L + G TPIQ ++PL L GRD+ G AQTGTGKT AF Sbjct: 21 TLTNFESLGVSKPIIATLFQLGIETPTPIQEHSIPLLLEGRDLIGLAQTGTGKTAAFGLP 80 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 LL+ D R LI+APTREL QI + + L++ + GG +K Sbjct: 81 LIEKLLADERRPD--NRTTRTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVSINK 138 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q LE G DIL+ T GRL+D + I L A++ +VLDEAD+M DLGF+ D+R + + + Sbjct: 139 QQLQLEKGTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMV 198 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS-NEEKMR 245 P +R MLFSAT+ + +LA E + + +EV P K ++++ + + + +K Sbjct: 199 P--KKRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVAGKNDKTE 256 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 LL+ + E RA++F TKH E++ HL G+ V + G+ +Q +R R L F G Sbjct: 257 LLRKSLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHGNKSQGQRERALKAFRDG 316 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 + L+ATDVAARG+ IPAV+HV+NYDLP+ + YVHRIGRT RAG G +I+ + A Sbjct: 317 SIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDEA 376 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLP 394 L IE +G I V+ A ++ P Sbjct: 377 KLLRDIERLMGIDITVASGEAPANISGGP 405 >UniRef50_A3EUK2 Putative ATP-dependent helicase n=2 Tax=Leptospirillum sp. Group II RepID=A3EUK2_9BACT Length = 444 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 165/415 (39%), Positives = 230/415 (55%), Gaps = 10/415 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L P+++ AL G + TPIQ ++P + GRD+ G AQTGTGKT FL Sbjct: 1 MTFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H + R RAL+++PTRELA QIH A+ A+ L GG + +Q Sbjct: 61 HKIAEGRRHGIRN----RALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQE 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ DI++ T GRL+D+ ++N++ L +V++DEADRM D+GF+ DI + R++P Sbjct: 117 RNLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPK 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLL 247 R ++LFSAT R++ELA N+A + VEPE+K I +E S+ +K+ LL Sbjct: 177 G--RQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLL 234 Query: 248 QTLIEE--EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 + +++E + IIF TK E++ L G+ L GD +Q R R+L F RG Sbjct: 235 KKVLDEGKSETGQVIIFTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVLSRFRRG 294 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 DL +LVATDVAARGL I +THV NYDLP EDYVHRIGRTGRAG +G ++S Sbjct: 295 DLKVLVATDVAARGLDIDGITHVINYDLPQTAEDYVHRIGRTGRAGRTGRALSFFHPADR 354 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 + +IET G IP S + L + RP G RT NR R+ Sbjct: 355 DIVRSIETMAGKPIPHSP-HSIPLSEQSLRKTFTRRPSFGRPQDRTPRGENRFRT 408 >UniRef50_Q0BSI7 ATP-dependent RNA helicase n=54 Tax=Alphaproteobacteria RepID=Q0BSI7_GRABC Length = 763 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 154/410 (37%), Positives = 213/410 (51%), Gaps = 6/410 (1%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D L V A+ + G+ + TPIQA A+P+ L GRDV G AQTGTGKT +F Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 L A + PR+LI+ PTRELA+Q+ + + L L GG+ + Q V Sbjct: 285 LSDRRA----RARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDV 340 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L GVD+LI T GRLID + + L +++V+DEADRM D+GFI D+ + +P + Sbjct: 341 LSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLP--H 398 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 R + FSAT++ +R LA + N + I V I L +K + L+ L Sbjct: 399 NRQTLFFSATMAPEIRRLADAFLQNPKEITVAKPASVATTITSGLALVGEMDKRKALRHL 458 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + +E A+IF N K + + L G G L GD+AQ R L++F G L +L Sbjct: 459 LRQEKVQNALIFCNRKRDVDILTKSLVKHGFAAGPLHGDLAQSLRFSTLEKFKAGSLQLL 518 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 V +DVAARG+ I ++HVFN+D+P EDYVHRIGRTGRAG G + +LA + + A Sbjct: 519 VCSDVAARGIDIGGLSHVFNFDVPIHAEDYVHRIGRTGRAGREGAAFTLASPDDKFAVDA 578 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 IE I IP + +P R R NG G R R Sbjct: 579 IEKLINAPIPRIEIEGLERAEWSEEPNRGRGRRHKNGKGGKGNNRYGSRG 628 >UniRef50_B7QFN5 ATP-dependent RNA helicase, putative n=1 Tax=Ixodes scapularis RepID=B7QFN5_IXOSC Length = 519 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 144/419 (34%), Positives = 196/419 (46%), Gaps = 9/419 (2%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + E K F +PIQA A P+ L GRD+ G AQTG+GKT+A++ Sbjct: 90 PRPVLTLDECNFPEPCRELFRSKNFTEPSPIQAQAWPVVLGGRDLVGIAQTGSGKTLAYV 149 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADA-EPLAEATGLKLGLAYGGDG 123 ++ P + P +++APTREL QI A E A LK YGG Sbjct: 150 LPAAIHMSDQPQP--ERDEGPIGVVLAPTRELVQQISQVAYEWCGGAFRLKGAPVYGGVS 207 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 Q+ L+ G I I T GRL+D + INL +VLDEADRM D+GF IR + Sbjct: 208 KGPQIARLQGGAHICIATPGRLLDILETGAINLLRCSYLVLDEADRMLDMGFEPQIRKIV 267 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQK-TGHRIKEELFYPSNEE 242 + P R +++SAT VR+LA E + + I V E H I++ + E Sbjct: 268 DQTRPD--RQTVMWSATWPSEVRDLAEEFLTDHVQITVGSEDLCANHNIRQVVHVCQGFE 325 Query: 243 KMRLLQTLIEE---EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K L + E E R +IF TK R I +L +G R GD++Q KR L Sbjct: 326 KEEKLLETLREINAEGDQRTLIFVATKARVVTIVQNLYKNGFRAVATHGDLSQNKRDIAL 385 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 D F G ILVATDVAARGL + + +V NYD PD E YVHRIGRTGR+ SG +I+L Sbjct: 386 DRFRSGKTPILVATDVAARGLDVSDIKYVINYDYPDTSESYVHRIGRTGRSNRSGTAITL 445 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 + A + + + + L+ R R P++R+ Sbjct: 446 FTPDNAGQAKQLVSVLQEAKQEVNPELLELVDRQVSQKFANRRRRPAQQSWDRRPQHRQ 504 >UniRef50_Q9VXW2 CG6227 n=20 Tax=Endopterygota RepID=Q9VXW2_DROME Length = 1224 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 123/402 (30%), Positives = 197/402 (49%), Gaps = 8/402 (1%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + ++ + K +E L + GF TPIQ A+P ++GRD+ G A+TG+GKT+AF+ Sbjct: 506 PKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFI 565 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 F ++L P++ D + A+IMAPTREL +QI D +++ GL+ YGG G Sbjct: 566 LPMFRHILDQPSMED--GDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGI 623 Query: 125 DKQLKVLESGVDILIGTTGRLIDYA---KQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 +Q+ L+ G +I++ T GR+ID NL + VVLDEADRM+D+GF + Sbjct: 624 SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR 683 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + P R ++FSAT ++ LA + + V +++ + +++ Sbjct: 684 IIDNVRPD--RQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDD 741 Query: 242 EKMRLLQTLIEEEWP-DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 K L L+ I+F + + + + L + L G + Q R + Sbjct: 742 AKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTII 801 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F G + +L+AT VAARGL + + V NYD+P+ EDYVHR GRTGRAG G + + Sbjct: 802 DFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFI 861 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402 E + I + S + AL T+ Sbjct: 862 TPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGK 903 >UniRef50_B8A609 Novel protein similar to vertebrate DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 (DDX43) n=2 Tax=Eumetazoa RepID=B8A609_DANRE Length = 719 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 147/408 (36%), Positives = 211/408 (51%), Gaps = 10/408 (2%) Query: 3 KTHLTEQKFSD-FALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 F + FA +P ++E + + GF TPIQ+ A P+ L G D+ G AQTGTGKT+ Sbjct: 271 TIPNPVCTFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTL 330 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 A+L F ++ P D++ N P L++ PTRELA+QI A+ + G K YGG Sbjct: 331 AYLLPGFIHMDGQPMPRDKR-NGPGMLVLTPTRELALQIEAECNKYS-YKGFKSICIYGG 388 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 + Q+KV+ SGVDI+I T GRL D INL +I +VLDEADRM D+GF I Sbjct: 389 GDRNAQIKVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMK 448 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSN 240 + + P R ++ SAT VR LA + + + V + + +++ + + Sbjct: 449 IILDIRPD--RQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQE 506 Query: 241 EEKMRLLQTLIEEEWP-DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +EK + I P D+ +IF K + +++ L G V L GD Q R L Sbjct: 507 DEKKDYVFDFIHRMEPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEAL 566 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 +F G + ILVATD+A+RGL + +THVFNYD P + E+YVHR+GRTGRAG SG S++L Sbjct: 567 QDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTL 626 Query: 360 ACEEYAL---NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 E L I G +P + + PR+ Sbjct: 627 VTREDWRVAAELITILERSGQDVPEELVLMAERYEKHRREKEMFGPRS 674 >UniRef50_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Rhodopirellula baltica RepID=Q7UJ92_RHOBA Length = 485 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 144/404 (35%), Positives = 216/404 (53%), Gaps = 11/404 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 KF D L +++ LE+ G+ TPIQA ++P L G DV G AQTGTGKT AF Sbjct: 1 MNKFEDLGLTGPLLQGLEQAGYETPTPIQAQSIPEILDGNDVLGAAQTGTGKTAAFALPI 60 Query: 68 FHYLLSHPAIADRKVNQPR---------ALIMAPTRELAVQIHADAEPLAEATGLKLGLA 118 + + L+++PTREL+ QI A+ + T L+ + Sbjct: 61 LQIMWEDDQERREPSKRRGGRPGRRPIRTLVLSPTRELSAQIEANFRIYGKKTRLRSTVI 120 Query: 119 YGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKD 178 +GG + Q++ L+SGVD L+ T GRL+D Q I+L ++++VLDEAD M D+GF+ D Sbjct: 121 FGGVNQNPQVRELQSGVDTLVATPGRLLDLVNQGFIDLKDVEILVLDEADHMLDMGFLPD 180 Query: 179 IRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP 238 ++ + + +P R N+LFSAT+ +R+LA E + + I++ P++ T RI++ + + Sbjct: 181 VKRILKFLP--RDRQNLLFSATMPGPIRKLADEILVDPVTIQIAPQKPTVERIEQSICFV 238 Query: 239 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 + +K RLL IE + ++F TKH + + L G + + G+ Q R+R Sbjct: 239 AQADKPRLLNHFIETKATGSTLVFTRTKHGADAVARRLVKAGVKAAAIHGNKTQANRVRT 298 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L++F +LD+LVATDVAARG+ I + V NYD P+ E YVHRIGRTGRAG G ++ Sbjct: 299 LNKFKNDELDVLVATDVAARGIDIDGIQTVINYDTPNTPEAYVHRIGRTGRAGREGETVM 358 Query: 359 LACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402 AIE I IPV+ P L P + Sbjct: 359 FCGGHETKFFIAIEREIKLQIPVATGLPGCQPRPLQDPESGDKA 402 >UniRef50_A5UZK3 DEAD/DEAH box helicase domain protein n=8 Tax=Bacteria RepID=A5UZK3_ROSS1 Length = 467 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 148/408 (36%), Positives = 212/408 (51%), Gaps = 13/408 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F HP++ + G+H TPIQ +P L GRDV G AQTGTGKT AF+ Sbjct: 1 MSFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L+ P + RA+I+ PTRELA QI E L + TGL+ YGG GY Q+ Sbjct: 61 QRLMRGPR------GRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQI 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GV+I + GRL+D+ ++ + L + +++LDEAD+M+D+GF+ D+R + R P Sbjct: 115 QRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPA 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 QR MLFSAT+ +R LA E + + I++ + ++ + K LL Sbjct: 175 --QRQTMLFSATMPDAIRALAREALREPQTIQIGR-SAPVSTVTHAIYPVAEHLKTALLI 231 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ +IF TKHR + + LA G+R L G+++Q +R LD F G Sbjct: 232 ELLRHTDTGSVLIFTRTKHRAQHLSDTLARMGYRATALQGNMSQNRRQAALDGFRSGRYQ 291 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATD+AARG+ + ++HV NYD+P E Y HRIGRTGRA +G + +L + Sbjct: 292 ILVATDIAARGIDVAHISHVINYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRSDTGMV 351 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 AIE IG + P R+ + PR PR+ Sbjct: 352 RAIERLIGEPLKRETVPGFDYHAAAP----AHDARSDHAPRHHAMPRH 395 >UniRef50_D2L498 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L498_9DELT Length = 492 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 147/413 (35%), Positives = 221/413 (53%), Gaps = 7/413 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F LH + E +++ G+ N TPIQA A+P GRD+ G AQTGTGKT AFL Sbjct: 1 MSFDSFCLHATITENIKRLGYENPTPIQAEAIPHVTEGRDLMGLAQTGTGKTAAFLLPII 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L++ + RALI+APTRELA QI+ L T L+ + YGG G Q Sbjct: 61 HRLMT----TKSEKRGVRALILAPTRELAEQIYRAGLDLGRGTRLRAAVIYGGVGMFPQT 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L GVDI++ GRL+D+ Q ++ A++ +VLDEAD M+D+GF+ DI+ + +P Sbjct: 117 RALRQGVDIIVACPGRLLDHMNQGNVRFDALETLVLDEADHMFDMGFLPDIKRILSALP- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 ++R +LFSAT+ + LA E + + + + ++ ++ S+ +K LL Sbjct: 176 -SERQTLLFSATMPPAISGLAHETLTDPVTVRIGH-MAPLSTVEHAIYPISHTQKAPLLL 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+EE I+F TKHR + + L GH+ L G+++Q++R +D F RG Sbjct: 234 HLLEEAGKQSVIVFTRTKHRAKNLALQLCRSGHKATCLQGNLSQRQRQIAMDGFRRGSFQ 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ + V HV N+D+PD E Y HRIGRTGRA G + + E + Sbjct: 294 VLVATDIAARGIDVSQVGHVVNFDIPDTAEAYTHRIGRTGRAEHEGQAHTFVTGEDMGMV 353 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG 421 AIE+++ +P + + PR R+ G ++ G Sbjct: 354 RAIESHMKKPLPRREVEGFEPDPSEFRRSYAPAPRYPARGRQGGYGGRPQQGG 406 >UniRef50_B6BTD3 Dead/deah box helicase domain protein n=1 Tax=beta proteobacterium KB13 RepID=B6BTD3_9PROT Length = 444 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 148/421 (35%), Positives = 226/421 (53%), Gaps = 10/421 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FS+F P + +A+ + + TPIQ +P+ L+G+DV AQTGTGKT AF Sbjct: 1 MSFSNFGFIPPIGKAISRINYSTPTPIQEQCIPVVLSGKDVLASAQTGTGKTAAFCLPLL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + P ++ P LI++PTRELA QI + + + + GG Y Q Sbjct: 61 NLVEKKPKHKHKRNISPDVLILSPTRELATQIEQELKRFSHFMDTNIVSVVGGVSYKLQN 120 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K+L+S V+ L+ T GRL+D KQ INL I +V+DEADRM D+GFI DI+ +F Sbjct: 121 KLLKSNVNFLVATPGRLMDLVKQRKINLKHIDALVIDEADRMLDMGFIPDIKKIFEST-- 178 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP-SNEEKMRLL 247 + + ++F+ATL+ ++ ++A + + + + I VE E K+ I++ + +K +L Sbjct: 179 SQDQQVLMFTATLNKQIEKIAQQFLKDPQRIAVEQENKSNKNIQQIAYPVADYNQKKLVL 238 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 ++ E ++AIIF TK + + L HR L GD++Q++R R ++ F ++ Sbjct: 239 VDVLNEADLNQAIIFTATKREADRLSDELYLMNHRSKTLHGDMSQRERTRTINRFKNNEI 298 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARG+ + +THV N+DLP EDY+HRIGRTGRA G +ISL ++ Sbjct: 299 QILVATDVAARGIDVDDITHVINFDLPRQVEDYIHRIGRTGRAERKGKAISLVIDKEKFM 358 Query: 368 LPAIETYIGHSIPVSK---YNPDALMTDLPKPLRLTRPRTGNGPRRTGAP----RNRRRS 420 L IE Y I V K D + K + R +G R+ R++ Sbjct: 359 LQKIEKYANIKIEVIKSTHSTSDLSLVYKKKESGFKKKRRSSGSRKKNDKFTSSSKRKKH 418 Query: 421 G 421 G Sbjct: 419 G 419 >UniRef50_P44586 Cold-shock DEAD box protein A homolog n=29 Tax=Pasteurellaceae RepID=DEAD_HAEIN Length = 613 Score = 555 bits (1433), Expect = e-157, Method: Composition-based stats. Identities = 139/402 (34%), Positives = 209/402 (51%), Gaps = 14/402 (3%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ + F+D L +++A+ GF +PIQ +P L G DV G AQTG+GKT Sbjct: 1 MTD----KITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKT 56 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAY 119 AF + D P+ L+MAPTRELA+Q+ E + G ++ Y Sbjct: 57 AAFALPLLAQI-------DPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLY 109 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG YD QL+ L+ G +++GT GR++D+ ++ +NL ++ +VLDEAD M +GFI D+ Sbjct: 110 GGQRYDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDV 169 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + +P + LFSAT+ +R + MN+ + ++++ + I + +Y Sbjct: 170 ETVMAELPENH--QTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVH 227 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K L +E E D AIIFA TK +I L +G R L GD+ Q+ R + L Sbjct: 228 GVRKNEALLRFLEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTL 287 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 D G LDI+VATDVAARG+ I ++ V NYD+P D E YVHRIGRTGRAG SG ++ Sbjct: 288 DRLRNGSLDIVVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLF 347 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L IE + I + ++ + + + + Sbjct: 348 VEPRERRLLRNIEHLMKKGINEVELPNHLVLQECRRKKFVAK 389 >UniRef50_B8FPB9 DEAD/DEAH box helicase domain protein n=12 Tax=Bacteria RepID=B8FPB9_DESHD Length = 428 Score = 555 bits (1432), Expect = e-157, Method: Composition-based stats. Identities = 143/405 (35%), Positives = 211/405 (52%), Gaps = 5/405 (1%) Query: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYL 71 ++ + + +AL +G+ TPIQA A+P L G D+ G AQTGTGKT AF L Sbjct: 7 NELKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSL 66 Query: 72 LSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVL 131 + K Q RAL++APTRELA QI L+ + +GG G Q + L Sbjct: 67 AMGQGLLKGK-RQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKL 125 Query: 132 ESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQ 191 E G+DIL+ T GRL+D Q I+L ++ VLDE D+M D+G + D++ + +P + Sbjct: 126 EKGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLP--RE 183 Query: 192 RLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLI 251 R NMLFSAT+ + +LA + I + PE I++E+++ K LL + Sbjct: 184 RQNMLFSATMPVEIEKLADTILKGPVKIAMTPEFSPLDIIEQEVYFVDKANKAALLTYWL 243 Query: 252 EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILV 311 + D ++F+ TKH ++I L G + G+ +Q R + L F + ILV Sbjct: 244 KNNEYDSVLVFSRTKHGADKIVKELNKKGFTAVAIHGNKSQANREQALHAFKKRKTRILV 303 Query: 312 ATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAI 371 ATD+AARGL I ++HV NY+LP+ E Y+HRIGRTGRAG G +I+ E L I Sbjct: 304 ATDIAARGLDIQELSHVINYNLPEVPETYIHRIGRTGRAGLGGKAITFCDFEEKPLLRDI 363 Query: 372 ETYIGHSIPVSKYNPDALMTD--LPKPLRLTRPRTGNGPRRTGAP 414 + IG ++P K +P L+ +PK + + A Sbjct: 364 QKRIGKTLPEVKEHPYPLVNTVIVPKAKTSQQAAAARPQKPATAK 408 >UniRef50_B6K0K2 ATP-dependent RNA helicase Prp11 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K0K2_SCHJY Length = 1056 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 136/428 (31%), Positives = 203/428 (47%), Gaps = 17/428 (3%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 +S L + + + GF + IQA A+P AGRDV G A+TG+GKT+AFL Sbjct: 455 PKPVTSWSQCGLSVQTLSVIRSLGFEEPSAIQAQAIPAITAGRDVIGVAKTGSGKTIAFL 514 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 F +++ + R P A+IM PTRELAVQI + +P A+A L+ AYGG Sbjct: 515 LPMFRHIMDQRPL--RNGEGPVAVIMTPTRELAVQIFRECKPFAKALDLRATCAYGGAPI 572 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNH---INLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q+ L+ G +I++ T GR+ID N NL VVLDEADRM+DLGF + Sbjct: 573 KDQIAELKRGAEIVVCTPGRMIDVLNANSGRVTNLHRCTYVVLDEADRMFDLGFEPQVMR 632 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + P R +LFSAT + LA + + I V +++ + S E Sbjct: 633 ILNNIRPD--RQVVLFSATFPRAMEALARKVLKKPIEITVGGRSVVAAEVEQLVEVRSEE 690 Query: 242 EKMRLLQTLIEE----EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLR 297 K L L+ E + R ++F + + + L G+ + G Q R Sbjct: 691 SKFPRLLELLGELYNTQPDVRTLVFVDRHESADALLSQLMKRGYSCNSIHGGKDQHDRDS 750 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 + ++ G D+L+AT VAARGL + ++ V NYD P+ EDYVHR+GRTGRAG +G ++ Sbjct: 751 TISDYKMGIFDVLIATSVAARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAV 810 Query: 358 SLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT------GNGPRRT 411 + + + I + S L + K ++ + + G G R Sbjct: 811 TFVTPDQSRYAVGIAKALKMSKQPVPLELQNLANEFLKNVKSGKEKAAGSGFGGKGLSRL 870 Query: 412 GAPRNRRR 419 RN R Sbjct: 871 DETRNAER 878 >UniRef50_Q3IJ60 ATP-dependent RNA helicase, cold shock protein A n=3 Tax=Alteromonadales RepID=Q3IJ60_PSEHT Length = 616 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 132/402 (32%), Positives = 209/402 (51%), Gaps = 15/402 (3%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS+ F L P +++A+E+ G+ + IQA +PL L +DV G AQTGTGKT Sbjct: 1 MSEP----VTFESLNLSPAILKAVEELGYKTPSEIQAQCIPLLLERKDVLGLAQTGTGKT 56 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAY 119 AF + + D V QP+ L++ PTRELA+Q+ E A+ G+++ Y Sbjct: 57 AAFALPLLNNI-------DPSVKQPQILVLTPTRELAIQVAEAFEQYAKHVRGIEVLALY 109 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y QL L G +++ T GRLID+ + I A+Q +VLDEAD M +GFI D+ Sbjct: 110 GGQSYSIQLSALRRGAQVIVATPGRLIDHINRGTIKFDALQALVLDEADEMLRMGFIDDV 169 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + P ++ LFSAT+ +++ ++ + MNN E + + T +++ + S Sbjct: 170 ESIMEKTP--REKQTCLFSATMPKQIQNISSKYMNNPEQVHISARNSTVSSVEQVFWNAS 227 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K + + +E E + AI+F T++ ++ L +G L GD+ Q+ R R + Sbjct: 228 -IHKNKAIVRFLEAEQYEGAIVFVRTRNDTVQLAELLEREGFSAAPLNGDMNQQARERTV 286 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + G L++++ATDVAARGL + ++ V NYD+P D E YVHRIGRTGRAG +G +I Sbjct: 287 ERLKSGMLNVVIATDVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKAILF 346 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L I + I + ++ + + Sbjct: 347 VKHNERYLLKNIIRHTNSDIAQVELPTAKIVEEKRIEALQAK 388 >UniRef50_B0SU57 ATP-dependent RNA helicase, DEAD-box family (DeaD) n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SU57_LEPBP Length = 534 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 131/402 (32%), Positives = 216/402 (53%), Gaps = 11/402 (2%) Query: 1 MSKTHLTEQK-FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGK 59 M+K F F L P++++ + + GF + +PIQ A+PL L G+D+ QAQTGTGK Sbjct: 6 MTKNDTEVGNDFQSFGLRPEILQGITEAGFESPSPIQKQAIPLVLEGKDLIAQAQTGTGK 65 Query: 60 TMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAY 119 T A+ + + + + L++ PTRELA+Q+ + L + G+K Y Sbjct: 66 TAAYGLPCLNRIKVE--------DGMQVLVLTPTRELALQVSDELFKLGKHLGIKTTTIY 117 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG Y KQ+ + G + + T GRL+D K + +V+LDEAD M D+GF+ DI Sbjct: 118 GGSSYSKQITQVAKGAQVAVATPGRLLDLLKGKELKNFKPSMVILDEADEMLDMGFMDDI 177 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 +F +P +R +LFSAT+ +++LA + + ++++ +K+ I++ + Sbjct: 178 ESIFNLLP--TKRQTLLFSATMPEPIKKLASKYQTHPAHVKIAATEKSSKNIEQVYYIID 235 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 E+ + +++ E P +AIIF TK +++ L+ G+ V L GD+ QK+R ++L Sbjct: 236 EAEREIAVVRILDYENPFKAIIFTKTKKEADDLKSTLSFKGYPVEALHGDLNQKQREQVL 295 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 G + ILVATDVAARGL + ++ V NY LP D E Y HRIGRTGRAG SG +++L Sbjct: 296 KSLHDGRVKILVATDVAARGLDVKDLSLVINYHLPFDSESYTHRIGRTGRAGKSGKAVTL 355 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 + L ++ G ++ ++ + + L + Sbjct: 356 VTTRESRALLRLKGTSGTNLTIAALPTKKEVHLSREEDFLKK 397 >UniRef50_C7RHZ9 DEAD/DEAH box helicase domain protein n=3 Tax=Anaerococcus RepID=C7RHZ9_ANAPD Length = 536 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 132/385 (34%), Positives = 204/385 (52%), Gaps = 11/385 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF++ + +++ A++ G+ +PIQ ++P L G D+ G++QTG+GKT AF Sbjct: 1 MKFNELNIGNEILRAIDDLGYEKPSPIQEESIPHLLEGNDLIGKSQTGSGKTAAFAIPII 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQ 127 + ++ +ALI+ PTREL +Q+ + E L + +K+ YGG +Q Sbjct: 61 ENIEANGI--------TQALILCPTRELCIQVSKEIEKLYKYKKEIKILSVYGGSHIVRQ 112 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 +K L+ GV+I++GT GRL+D ++ + L ++ VVLDEAD M+D+GF D++++ R Sbjct: 113 IKSLKKGVEIVVGTPGRLMDLMRRKVLKLDQLKTVVLDEADEMFDMGFRDDMKFILDRTN 172 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 P R FSAT+ ++E + N ++++ ++ T RI + K L Sbjct: 173 PN--RQTCFFSATMGPEIQEFSKLYQTNPYEVKIKSKEVTVDRIDQYYIKLKESMKEEAL 230 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+E + AI+F NTK + + + L + V L GD+ Q R +++ +F + Sbjct: 231 MRLLEIHKANLAIVFCNTKRKVDRLVESLTKKNYLVDGLHGDLKQSSRDQVMKKFRNKTI 290 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATD+AARGL + V VFNYDLP E YVHRIGRT RAG SG S SL Sbjct: 291 QILVATDIAARGLDVDDVDIVFNYDLPQLDEYYVHRIGRTARAGKSGLSFSLISGRDNNR 350 Query: 368 LPAIETYIGHSIPVSKYNPDALMTD 392 L IE Y +I M Sbjct: 351 LRQIENYTKANIKQMPVPTLVQMDR 375 >UniRef50_Q3SF48 DEAD/DEAH box helicase n=7 Tax=cellular organisms RepID=Q3SF48_THIDA Length = 533 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 160/411 (38%), Positives = 226/411 (54%), Gaps = 13/411 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FS+ L P +++++ G+ N TP+Q A+P L+G D+ + TG+GKT AFL + Sbjct: 1 MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSI 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQ 127 LL+ PA+ K PR L++ PTRELA+Q+ A + + GG Y Q Sbjct: 61 QRLLAEPAV---KSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQ 117 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 LK L VD+++ T GRLID+ ++ I+ ++V+VLDEADRM D+GF+ DI+ + R P Sbjct: 118 LKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCP 177 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRL 246 +R +LFSATL V LA E +A+ IE+E +I++ L + N + K RL Sbjct: 178 A--ERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKEAKIEQRLLFADNMDHKNRL 235 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L L+ + +AI+FA+TK EEI LA G L GD+ Q +R R L G Sbjct: 236 LDALLRDVEMVQAIVFASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGR 295 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 +LVATDVAARG+ + +++HV N+DLP EDYVHRIGRTGRAG +G ++S A Sbjct: 296 TRVLVATDVAARGIDVASISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAGMREGG 355 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNR 417 + IE Y G+ I V R + R GNG R PR Sbjct: 356 LVKNIERYTGNRIEVHTLPGLEPTQ------RPSTGRPGNGRPRGNGPRGG 400 >UniRef50_A9ENG9 ATP-independent RNA helicase n=18 Tax=Bacteria RepID=A9ENG9_SORC5 Length = 624 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 142/420 (33%), Positives = 209/420 (49%), Gaps = 12/420 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M T + F+ + P ++ L + G+ TPIQ A+P L GRD+ GQA TGTGKT Sbjct: 1 METTP-SSASFAALGIAPALLGVLAELGYEEPTPIQREAIPHLLTGRDLLGQAATGTGKT 59 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AF L I P AL++ PTRELA+Q+ G+++ YG Sbjct: 60 AAFALPLLQRL----EIGGEPPRLPEALVLVPTRELAMQVAEAMHRYGRRLGVQVLSVYG 115 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G + +QL+ L GV +++ T GR +D+ + + L I+ VVLDEAD M D+GF + + Sbjct: 116 GQPFGQQLRALRRGVHVVVATPGRTLDHIGRGTLALDGIRTVVLDEADEMLDMGFAEALE 175 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTG---HRIKEELFY 237 + P R +LFSATL R+ +A + +++ E+ R+++ + Sbjct: 176 EILSATP--GARQTVLFSATLPPRIAAIAGRHLREPVRVKIAGEKAAPGELPRVRQTAYI 233 Query: 238 PSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLR 297 K L +++ E P AI+F T++ +E+ L A G+ L G +Q+ R R Sbjct: 234 VPRAHKSAALTRVLDMEDPSSAILFCRTRNEVDELTEALRARGYEAQALHGGFSQEHRDR 293 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 ++ F G ++LVATDVAARGL I V+HV NYD+P E YVHRIGRTGRAG G +I Sbjct: 294 VMARFRAGTAELLVATDVAARGLDIEHVSHVINYDVPCAPEVYVHRIGRTGRAGREGAAI 353 Query: 358 SLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNR 417 +L + +E G I + + + L LTR GA R R Sbjct: 354 TLVEPREHYLIRNVERLTGQRIEAATLPT--VADLRARRLELTRASLREALIEGGAERFR 411 >UniRef50_Q725W5 ATP-dependent RNA helicase, DEAD/DEAH family n=3 Tax=Desulfovibrio vulgaris RepID=Q725W5_DESVH Length = 532 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 137/390 (35%), Positives = 203/390 (52%), Gaps = 10/390 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + + F D L ++++A+E+ GF +PIQ++A+P L GRDV GQAQTGTGKT AF Sbjct: 2 ESVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGL 61 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGY 124 + D +AL++ PTRELA+Q+ LA+ G+++ YGG Sbjct: 62 PLLQRI-------DAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPI 114 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 + Q L G +++GT GR++D+ + + LG +++ VLDEAD M D+GF +DI + Sbjct: 115 EPQASALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILS 174 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 MP + FSAT+ + ELA + E + V Q T ++ F ++ Sbjct: 175 EMPEWV--QSAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVRPFRRV 232 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 + + + P +AI+F TK +E+ L G L GD+ Q +R R++ F Sbjct: 233 DAVCRIFDAYIPRKAIVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRA 292 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G + +LVATDVAARGL + V V N+DLP+D E YVHRIGRTGRAG +G + S A Sbjct: 293 GGISVLVATDVAARGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAGRD 352 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLP 394 L I+ G I A + Sbjct: 353 VYKLRDIQRVTGSRIDRRAMPTAADASRAR 382 >UniRef50_D2QY81 DEAD/DEAH box helicase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY81_9PLAN Length = 458 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 136/399 (34%), Positives = 210/399 (52%), Gaps = 7/399 (1%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 ++ T + F+ L +++ ALEK G+ TPIQA +P L G DV GQA+TGTGKT Sbjct: 4 LTGTDAPKPTFASMDLSDQMMAALEKAGYEYPTPIQAGLIPRALEGVDVVGQARTGTGKT 63 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +F+ L +R P+ALI+ PTRELAVQ+ + L+E + YG Sbjct: 64 ASFVIPILELLD-----IERGAPTPQALILVPTRELAVQVRDEVVKLSEGLKINCAAVYG 118 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G Q+ L+ G +++GT GR++D+ + I+ I+ VVLDEADRM D+GF DI Sbjct: 119 GKPIKSQVDKLKKGCHVVVGTPGRVLDHIARGTIDFTHIECVVLDEADRMLDIGFRPDIE 178 Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN 240 + +R P +R +L SAT+ + +LA M E + P + I+++ F + Sbjct: 179 RILKRCP--RERQTLLLSATVPPPIAKLAQRYMYEPEMLNFSPADVSVDTIEQKYFTVEH 236 Query: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 + K LL L+ E P +AI+F TK ++++ L + GD++Q +R R++ Sbjct: 237 DRKFDLLMKLLLREEPKQAIVFCRTKRGTDKVYQKLTKKLGNTAAIHGDLSQGQRDRVMA 296 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 F G + LVATDV RG+ + V+H+ N+D+P C+DYVHR+GRTGR G G + + Sbjct: 297 GFRDGSVRYLVATDVIGRGIDVSTVSHIVNFDIPVFCDDYVHRVGRTGRMGREGVAYTFV 356 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 C + L IE I + + + + R Sbjct: 357 CPDEGHELTRIEERINKLLKRDEMRDFEPVGYGERSARA 395 >UniRef50_P42305 ATP-dependent RNA helicase dbpA n=99 Tax=Firmicutes RepID=DBPA_BACSU Length = 479 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 135/402 (33%), Positives = 212/402 (52%), Gaps = 10/402 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F ++ + ++ ALE G+ T +Q +P L +D+ ++QTG+GKT +F Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCE- 62 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130 +A+ N+P+ALI+ PTRELAVQ+ D + +K +G +DKQ Sbjct: 63 ------LANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAE 116 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L+ I++GT GR++D+ ++ + L + +V+DEAD M ++GFI+ + + + +P Sbjct: 117 LKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLP--T 174 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 +R MLFSATL + +L+ + M N E+IEV+ T I+ + E K LL+ + Sbjct: 175 ERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDV 234 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 + E PD IIF TK ++ L G+ + G + Q+ R +++EF RG+ L Sbjct: 235 LMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYL 294 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 VATDVAARG+ I ++ V NYDLP + E YVHR GRTGRAG G +IS L Sbjct: 295 VATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLAD 354 Query: 371 IETYIGHSIPVSKYNP-DALMTDLPKPLRLTRPRTGNGPRRT 411 IE YIG I + + + P+ L R + ++ Sbjct: 355 IEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKS 396 >UniRef50_C5S7U5 DEAD/DEAH box helicase domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7U5_CHRVI Length = 662 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 143/407 (35%), Positives = 218/407 (53%), Gaps = 10/407 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M T F L P + +A++ G+ + T IQ+ +P LAGRD+ GQAQTGTGKT Sbjct: 1 MDTPDETSVGFDALGLSPVIAQAVKNLGYESPTAIQSQCIPHLLAGRDLLGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAY 119 AF L D + +P+ L++ PTRELA+Q+ + A G + Y Sbjct: 61 AAFALPMLSRL-------DPDLRKPQVLVLTPTRELALQVAEAFQRYATDLKGFNVLPIY 113 Query: 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 GG GY QL L+ +++GT GR++D+ ++ + L +I+ +VLDEAD M ++GF +DI Sbjct: 114 GGQGYGLQLSQLKRNPQVIVGTPGRVMDHIRRGTLALDSIRALVLDEADEMLNMGFAEDI 173 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 W+F + P +R LFSAT+ +R +A ++ + +++ +T I++ + Sbjct: 174 DWIFDQAPA--ERQVALFSATMPPAIRRVAQTRLVDPVEVKIAANSETVDTIEQHHCIVT 231 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K+ +L ++E E D +IF TK+ E+ L A G L GD+ Q+ R R + Sbjct: 232 RFHKLDVLTRIMELEPFDGLLIFVRTKNATTELADKLKAHGFAAEPLNGDMNQEMRERTV 291 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + +G LD+LVATDVAARGL + ++HV NYD+P D YVHRIGRTGRAG +G +I L Sbjct: 292 ERLKQGQLDVLVATDVAARGLDVERISHVVNYDIPTDPSAYVHRIGRTGRAGRAGRAILL 351 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGN 406 L +IE I IP + A +++ + R Sbjct: 352 VEPRERGLLKSIERVIRRPIPSMEPPSAAALSESRIDRFIGEIRKAQ 398 >UniRef50_A8P4I3 ATP-dependent RNA helicase An3, putative n=2 Tax=Brugia malayi RepID=A8P4I3_BRUMA Length = 754 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 150/421 (35%), Positives = 215/421 (51%), Gaps = 16/421 (3%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D LHP + + G+ TP+Q ++P + RD+ AQTG+GKT AFL + Sbjct: 291 FADLKLHPWIEGNIRLSGYGRPTPVQKYSIPTLMNNRDLMSCAQTGSGKTAAFLVPLINN 350 Query: 71 LLSHPAIA---------DRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 +L A R+ P ALI++PTREL++QI+ ++ A T + L YGG Sbjct: 351 VLQAGPEALYKSTTQQNGRRRQYPAALILSPTRELSLQIYNESRKFAYRTPITSALLYGG 410 Query: 122 -DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 + Y +Q+ L GV ILI T GRLID +Q I L + +VLDEADRM D+GF IR Sbjct: 411 RENYREQINKLRLGVHILIATPGRLIDVMEQGLIGLDGCRFLVLDEADRMLDMGFEPQIR 470 Query: 181 WL--FRRMPPANQRLNMLFSATLSYRVRELAFEQ-MNNAEYIEVEPEQKTGHRIKEELFY 237 + +MPP QR+ +FSAT ++ LA + M N ++ V T I +++ + Sbjct: 471 QIVDLSKMPPKGQRVTAMFSATFPKEIQVLAQDFLMPNYVFLAVGRVGSTSENIMQKIVW 530 Query: 238 PSNEEKMRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRL 296 EK L L++ P ++F TK ++ +L DG+ V + GD+ Q R Sbjct: 531 VEEHEKKSFLMDLLDAGEPSALTLVFVETKRGASDLAYYLQKDGYNVVAIHGDLKQFDRE 590 Query: 297 RILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHS 356 + L+ F G ILVAT VAARGL IP V HV NYDLP D ++YVHRIGRTGR G G + Sbjct: 591 KHLETFRSGVATILVATAVAARGLDIPNVKHVINYDLPSDIDEYVHRIGRTGRVGNVGLA 650 Query: 357 ISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 S ++ + + + + + D + TRP G R G + Sbjct: 651 TSFFNDKNRNIARDLAELVVEANQELPEWLEKISADAQR--YGTRPGRAKGGSRFGGRDH 708 Query: 417 R 417 R Sbjct: 709 R 709 >UniRef50_UPI0001C311D7 DEAD/DEAH box helicase domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C311D7 Length = 481 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 146/413 (35%), Positives = 216/413 (52%), Gaps = 14/413 (3%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F+D L V+EAL G+ N +PIQ A+P LAG D+ GQAQTG+GKT AF Sbjct: 1 MTTFADLGLSAPVLEALRDVGYENPSPIQEQAIPPLLAGNDMIGQAQTGSGKTAAFGLPL 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 Y+ D +AL++ PTREL +Q+ G+ + +GG Q Sbjct: 61 MEYV-------DPSDRDVQALVLTPTRELCIQVTQALRSYGARKGIDVVAVFGGAPIRSQ 113 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L +G I++GT GR+ D ++ + L + VVLDEAD M DLGF++D+ + P Sbjct: 114 QAQLRAGGQIVVGTVGRVKDLISRHSLMLHGTRFVVLDEADEMLDLGFLEDVEKILALTP 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 + R LFSAT+ +R+L+ + N +++V T +++ S +K +L Sbjct: 174 GS--RQTALFSATMPPEIRKLSERYLYNPVHVKVRAATLTVDTVEQFSLEMSQRDKPDML 231 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 T++E E PD+AI+F TK RC++++ L G V L GD++Q +R ++ F G L Sbjct: 232 GTVLESEKPDQAIVFVRTKIRCDQLYRTLRDRGMNVKALHGDMSQGQRDGVMLSFKSGRL 291 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARGL I +VTHV N+D+P + YVHRIGRTGR G SG +I+ + + Sbjct: 292 PILVATDVAARGLDISSVTHVVNFDVPTSPDVYVHRIGRTGRVGRSGRAITFYDSKQKRD 351 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 + AIE + + P + +P+ AP N R+ Sbjct: 352 IEAIERHT-----RTPMAPWTAGARVAALRVEVKPKRHESKPHDAAPTNGDRA 399 >UniRef50_C9RIQ5 DEAD/DEAH box helicase domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIQ5_FIBSS Length = 802 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 140/401 (34%), Positives = 210/401 (52%), Gaps = 10/401 (2%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + F D L P+V+EA++ G+ +PIQA A+P L G ++ G AQTGTGKT AF Sbjct: 120 DESLVTFDDLGLSPEVLEAVKLAGYETPSPIQAKAIPALLQGANLLGTAQTGTGKTAAFS 179 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDG 123 + + + L++ PTRELA+Q+ + A + + + YGG Sbjct: 180 LPLLSRINFN-------GRETSMLVLTPTRELAIQVSDAIQQYAVKMQNVTVVPVYGGQD 232 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 QL+ L+ I++ T GRLID+ K+ I+LGA++ +VLDEAD M D+GF++D+ + Sbjct: 233 IAIQLRALKRKASIVVATPGRLIDHIKRGSISLGAVKAIVLDEADEMLDMGFMEDVETIL 292 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 + +P QR LFSAT+ V+++ + + E +E + T I + NE K Sbjct: 293 KEIPADAQR--ALFSATMPDSVKKIIDQHLGEYEEARIEGKTTTVENICQRYLLVKNEHK 350 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 + L ++E E D +IF TK E+ L + G V L GD+AQ R R ++ Sbjct: 351 IEALARVLEGEEFDGVLIFVRTKQNTTEVAEKLESRGFNVAPLNGDLAQSMRERTINRLK 410 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G LDI+VATDVAARG+ + ++ V NYD+P D E YVHRIGRTGRAG SG++I Sbjct: 411 MGKLDIVVATDVAARGIDVDRISLVVNYDIPYDTESYVHRIGRTGRAGRSGNAILFITPR 470 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 L IE I V + ++ + ++ Sbjct: 471 EKRMLKTIEKATRQPIDVMEMPTSEQISKKRVDAFKAKVKS 511 >UniRef50_C5KR89 RNA helicase, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KR89_9ALVE Length = 584 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 130/397 (32%), Positives = 202/397 (50%), Gaps = 16/397 (4%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + F +++ EK G+ T IQ + P+ L+GRD+ G AQTG+GKT+AF+ Sbjct: 170 PKPIRTFEQGQFPEVLMKEFEKAGYTEPTNIQKIGWPVALSGRDMVGVAQTGSGKTVAFM 229 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 ++ + + + + P L++ PTRELA+Q+ A+A + GL +GG Sbjct: 230 LPAIIHVNAQAPL--KHGDGPVVLVLVPTRELAMQVQAEATRFGKMAGLMNTAIFGGVPR 287 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 Q L GV+I I T GRL+D+ + NL + +VLDEADRM D+GF IR + Sbjct: 288 YNQANDLRRGVEICIATPGRLLDFLETGVTNLKRVTYLVLDEADRMLDMGFEPQIRRIVS 347 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQ-KTGHRIKEELFYPSNEE 242 ++ P R ++SAT V+ +A + + V Q + +K+ + S + Sbjct: 348 QIRPD--RQTTMWSATWPKEVQSMARDFCREEPIRLTVGNTQLQANPDVKQRVEVVSEMD 405 Query: 243 KMRLLQTLIEEEWPD--RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 K ++ ++E +P R I+F TK + + + + + GD Q++R RIL+ Sbjct: 406 KRQMFFDWLKETYPKGSRIIVFTETKKGADALTREMRYNNFNAASIHGDKEQRERDRILN 465 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F G ++LVATDVA RGL I V V NYD+P EDYVHRIGRTGRAGA G+S++ Sbjct: 466 DFKTGRCNVLVATDVAQRGLDIKNVEWVVNYDMPKTVEDYVHRIGRTGRAGAVGNSLTFI 525 Query: 361 -----CEEYALNLPAIETYI---GHSIPVSKYNPDAL 389 + I + + P S Y+ A+ Sbjct: 526 TNDTHTPDRVRMAKDIVKCMEDVKQTPPQSLYDMAAI 562 >UniRef50_Q7NHM7 Gll2508 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHM7_GLOVI Length = 437 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 144/396 (36%), Positives = 224/396 (56%), Gaps = 9/396 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FS L VV+AL++ GF TPIQ ++P L GRD+ QAQTGTGKT AF Sbjct: 3 TAFSALGLSESVVKALDELGFEQPTPIQLKSIPFLLDGRDLLAQAQTGTGKTAAFGLPLV 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 +D + + +AL++APTRELAVQ+ ++ +G+++ YGG D+Q+ Sbjct: 63 DR-------SDPQDARVQALVLAPTRELAVQVCEAIHTYSKHSGVRVLPIYGGQPIDRQM 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L +G I++GT GR++D ++ ++L A++ +VLDEAD+M D+GFI++++ + PP Sbjct: 116 RRLRAGAQIVVGTPGRVLDLMRRGSLDLSALRTLVLDEADQMLDMGFIEEVQTILDAAPP 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R + FSATL +R+LA + + + E++ I + +++ + + + + L Sbjct: 176 --ERQLVFFSATLPASIRKLAARHLRTPMTLTMPAEERDTPAIAQRVYFVNFKNRAQALT 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ E P A+IF TK +E+ L DGHR L GD+ Q R +L F R L+ Sbjct: 234 RVLAAEDPASALIFTRTKQAADELAEQLQDDGHRAEALHGDLNQSAREAVLGRFRRQQLN 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ++VATDVAARGL I ++HV NYD+P D E Y+HRIGRTGRAG +G +IS A L Sbjct: 294 VVVATDVAARGLDIADLSHVINYDMPQDGESYIHRIGRTGRAGRTGVAISFALPTDRYRL 353 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 IE G ++ +K + + + R Sbjct: 354 RLIERATGSTLVPAKIPSAGEIQVRRTERLVEQLRR 389 >UniRef50_B6YWR7 DEAD/DEAH box RNA helicase n=3 Tax=Thermococcus RepID=B6YWR7_THEON Length = 403 Score = 552 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 136/413 (32%), Positives = 204/413 (49%), Gaps = 12/413 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGR-DVAGQAQTGTGKTMAFLTST 67 F + L + A+ +KGF T IQ +P L+G D+ GQ+QTGTGKT AF Sbjct: 1 MSFENLGLSEATLVAVRRKGFSQPTDIQKEVIPRLLSGDADIIGQSQTGTGKTAAFALPI 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + D K +A+I+APTRELA+Q+ + + L + + YGG Q Sbjct: 61 IEAI-------DEKEKSVQAIILAPTRELALQVADEIKSLRGRKRVYVYAVYGGQPIGPQ 113 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ LE G +++GT GR++D+ ++ ++L ++ +LDEADRM D+GFI DI +FR P Sbjct: 114 IRALERGTHVVVGTPGRVLDHIRRGTLDLSKVKFFILDEADRMLDMGFIDDIEAIFRETP 173 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 + ++FSAT+ + LA MN+ E I+V ++ +++E K L Sbjct: 174 KKKR--VLMFSATMPREILRLARRYMNDYEVIKVSSDELVPGMVEQEYIEVVPARKFSTL 231 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 + ++ I+F TK E+ L G+ L GD++Q R R F Sbjct: 232 KKILS--DDFYGIVFCATKRETRELSEKLRKQGYSAEALNGDMSQAARERTFWRFKTKRT 289 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARGL + ++H+ NY LP EDYVHRIGRTGR G G +++ Sbjct: 290 RILVATDVAARGLDVQDISHIVNYSLPMTAEDYVHRIGRTGRMGKKGKAVTFIMPGEFKR 349 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 L I + G I S+ + + + R RP+ R R R Sbjct: 350 LRYIASVAGVDIQKSELSEELPREYHERYKREERPQRYRKNGRRDYSRGYSRR 402 >UniRef50_B9SAJ6 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAJ6_RICCO Length = 956 Score = 552 bits (1424), Expect = e-156, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 182/356 (51%), Gaps = 9/356 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F P+++ + GF TPIQA P+ L RD+ A+TG+GKT+ Sbjct: 482 DVPAPFITFEASGFPPEILNDIRDAGFLAPTPIQAQTWPIALRNRDIVAIAKTGSGKTLG 541 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 +L F L + N P L++APTRELA QI + ++ + YGG Sbjct: 542 YLIPAFILL---RQCRNNPQNGPTVLVLAPTRELATQIQDEVIKFGRSSRVSCTCLYGGA 598 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 QLK L G DI++ T GRL D + I+ G + ++VLDEADRM D+GF IR + Sbjct: 599 PKGPQLKELTRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKI 658 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFYPSN 240 +PP +R ++++AT VR++A + + N + + E I + + Sbjct: 659 VNEIPP--RRQTLMYTATWPKEVRKIANDLLVNPVQVNIGSVDELAANKSITQYVEVVPQ 716 Query: 241 EEKMRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 EK L ++ + + IIF +TK C+++ + + GD +Q +R +L Sbjct: 717 MEKESRLGQILRAQERGSKVIIFCSTKRLCDQLARSI-GHQFGAAAIHGDKSQGERDWVL 775 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGH 355 ++F G ILVATDVAARGL I + V NYD P EDYVHRIGRTGRAGA+G Sbjct: 776 NQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGV 831 >UniRef50_Q9NQI0 Probable ATP-dependent RNA helicase DDX4 n=53 Tax=Coelomata RepID=DDX4_HUMAN Length = 724 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 127/388 (32%), Positives = 196/388 (50%), Gaps = 9/388 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F + L + + K G+ TP+Q ++P+ LAGRD+ AQTG+GKT A Sbjct: 282 DAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAA 341 Query: 63 FLTSTFHYLLSHPAIADR--KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 FL +++ A R ++ +P +I+APTREL QI+ +A + T ++ + YG Sbjct: 342 FLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYG 401 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G ++ + G +IL T GRL+D + I L I+ +VLDEADRM D+GF +++ Sbjct: 402 GTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMK 461 Query: 181 WLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFY 237 L MP QR ++FSAT ++ LA E + N ++ V +++ + Sbjct: 462 KLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQ 521 Query: 238 PSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLR 297 K L ++ +R ++F TK + + I L + + GD Q++R + Sbjct: 522 VGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQ 581 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 L +F G +LVAT VAARGL I V HV N+DLP ++YVHRIGRTGR G +G +I Sbjct: 582 ALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAI 641 Query: 358 SLACEEYALN----LPAIETYIGHSIPV 381 S E + L + T +P Sbjct: 642 SFFDLESDNHLAQPLVKVLTDAQQDVPA 669 >UniRef50_A7K2L3 ATP-dependent RNA helicase n=17 Tax=Vibrionaceae RepID=A7K2L3_VIBSE Length = 419 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 145/417 (34%), Positives = 220/417 (52%), Gaps = 13/417 (3%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F+D + K++E L TP+Q ++P L G+++ AQTGTGKT AF Sbjct: 4 NFADLGIEQKLIETLSNLNIVTPTPVQEKSIPHVLEGKNLLAAAQTGTGKTAAFGLPIIQ 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + P+AL++ PTRELA Q+ + + T L++ YGG Q + Sbjct: 64 TVQQKKL-----NGTPQALVLVPTRELAQQVFDNLNQYSAQTELRIVCVYGGTSIGVQKR 118 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE G DILI T GRL+D+ ++N+ ++VLDEADRM D+GF D++ +FRR+P Sbjct: 119 KLEEGADILIATPGRLLDHLFNGNVNISKTSMLVLDEADRMLDMGFWPDLQRIFRRLPA- 177 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 ++ +LFSAT R++ +A++ M + +EV P T +K+ ++ + K LL Sbjct: 178 -EKQILLFSATFEKRIKTIAYKLMESPVEVEVSPANTTAETVKQMVYPVDKKRKRELLAY 236 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 LI + ++F TK +E+ L DG + + GD +Q R R LDEF +G + Sbjct: 237 LIGSRNWQQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRA 296 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 L+ATDVAARGL I + V N+D+P EDYVHRIGRTGRAG SG ++SL + L Sbjct: 297 LIATDVAARGLDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSLMSRDEEYLLH 356 Query: 370 AIETYIGHSIPVS---KYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR---NRRRS 420 AIE + +P + P + P+ R R+ + +R + ++ R Sbjct: 357 AIENLLDQRLPQEWLAGFEPTLIEEVEPEKNGSGRRRSRSSEKRKLKAKLAIHKNRG 413 >UniRef50_Q5HME0 Probable DEAD-box ATP-dependent RNA helicase SERP1688 n=56 Tax=Staphylococcus RepID=Y1688_STAEQ Length = 509 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 143/411 (34%), Positives = 214/411 (52%), Gaps = 11/411 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 Q F + + K V+ LE GF TPIQ ++P L G D+ GQAQTGTGKT AF Sbjct: 1 MQNFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPL 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 ++ ++LI+APTRELA+Q+ ++ +++ +GG ++Q Sbjct: 61 IEKVVGQ--------QGVQSLILAPTRELAMQVAEQLREFSKGQKVQVVTVFGGMPIERQ 112 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 +K L+ G I++GT GR+ID+ + + I ++LDEAD M ++GFI D+R++ ++P Sbjct: 113 IKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIP 172 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 QR MLFSAT+ ++EL + M + I+ + + +I E EK Sbjct: 173 A-EQRQTMLFSATMPKAIQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTF 231 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 ++ P+ AI+F TK R +E+ L + G++ L GD+ Q KRL +L +F + Sbjct: 232 TNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQI 291 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 DILVATDVAARGL I V+HV+N+D+P D E Y HRIGRTGRAG G +++ Sbjct: 292 DILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDY 351 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 + IE + P L + R N R PR +R Sbjct: 352 IRQIEDVNNRRMKA--LRPPHRKEVLKAREDDIKDRVQNWMSRENEPRLQR 400 >UniRef50_D2VEC4 DEAD/DEAH box helicase n=1 Tax=Naegleria gruberi RepID=D2VEC4_NAEGR Length = 535 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 137/393 (34%), Positives = 205/393 (52%), Gaps = 14/393 (3%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTL-AGRDVAGQAQTGTGKTM 61 F + LH ++ ++K G+ TPIQ ++P + + RD+ AQTG+GKT Sbjct: 99 DPPTPLATFEEADLHELLMTNVKKSGYTKPTPIQKHSMPAIVTSKRDMMACAQTGSGKTA 158 Query: 62 AFLTSTFHYLLSHPAIADRK-----VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLG 116 AFL + LL D++ P+A+I+APTREL QI+ + T LK Sbjct: 159 AFLLPIINALLKSGIHKDKRRFAPNKGNPKAVILAPTRELCQQIYDECRKFIFQTYLKTV 218 Query: 117 LAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFI 176 + YGG Q+K LE GVDIL+GT GR+ D+ ++ +++ +Q +VLDEADRM D+GF Sbjct: 219 VVYGGASSGYQMKQLERGVDILVGTPGRMNDFIQREKLDMSGVQYLVLDEADRMLDMGFE 278 Query: 177 KDIRWLF--RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEE 234 IR + MPP RL +L+SAT ++LA + +++ +++V T I + Sbjct: 279 PQIRSIVEGSGMPPKGDRLTLLYSATFPKETQKLALDFLHDELFVQVGIIGGTTDNITQS 338 Query: 235 LFYPSNEEKMRLLQTLI--EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQ 292 + K L ++ ++E ++ ++F K C+ I+ L G + ++ GD Q Sbjct: 339 FYQVDRRGKQDKLVEVLTEKKEEREKTLVFVQQKSTCDRIYELLTPLGFKCSVIHGDKDQ 398 Query: 293 KKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGA 352 + R R L +F G +ILVATDVAARGL I V HV NYDLP + + Y+HRIGRTGR G Sbjct: 399 RSRERSLRQFKDGYTNILVATDVAARGLDIEKVAHVINYDLPKEIDSYIHRIGRTGRVGN 458 Query: 353 SGHSISLACEEYA----LNLPAIETYIGHSIPV 381 G + + L I IP Sbjct: 459 LGIATAFFDPSEDGKLCRELVKILKDANQEIPE 491 >UniRef50_A1B2U6 DEAD/DEAH box helicase domain protein n=23 Tax=Rhodobacterales RepID=A1B2U6_PARDP Length = 479 Score = 551 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 151/417 (36%), Positives = 218/417 (52%), Gaps = 5/417 (1%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + F+ + +V L G +PIQ ++P +AGRD+ G AQTGTGKT AF Sbjct: 63 PEIDTAFTRMGIDARVAINLPGLGIETPSPIQEKSIPGIVAGRDLLGLAQTGTGKTAAFG 122 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 LL+ + RALI+APTRELA QI + + A T ++ GG Sbjct: 123 LPMLTRLLNIGR--KPEPRTCRALILAPTRELATQIAENIDNYAIGTPIRQFRVVGGASI 180 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 + Q++ LE GVD+LI T GRLID ++ I+L + +VLDEAD+M D+GFI +R + + Sbjct: 181 NVQVQRLERGVDVLIATPGRLIDLIERGAIDLSQTRYLVLDEADQMLDIGFIHALRRIAK 240 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 +P +R +LFSAT+ + ELA +N+ + V P + +I + + + + +K Sbjct: 241 MLP--RERQTLLFSATMPKLMEELADSYLNDPLRVAVNPPGQAAEKIDQGVHFVNQGDKA 298 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 LL + + + AI+F TKH E++ L G +V + G+ +Q +R R L F Sbjct: 299 TLLAEYLSKHVDELAIVFGRTKHGSEKLCKLLDKWGFKVAAIHGNKSQGQRERALASFRA 358 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G+ +LVATDVAARGL IP V HV+NYDLP+ E+YVHRIGRT RAG G +I+ Sbjct: 359 GETKVLVATDVAARGLDIPQVAHVYNYDLPNVPENYVHRIGRTARAGRDGRAIAFCSPTE 418 Query: 365 ALNLPAIETYIGHSIPVS-KYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 L AIE + I V P + RP G R P ++ Sbjct: 419 IGELRAIEKAMKAKIAVVGGEEPFEAAKIRERGGPAGRPAQGARKRPARRPSRAPKT 475 >UniRef50_C6C1F3 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1F3_DESAD Length = 493 Score = 551 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 143/414 (34%), Positives = 208/414 (50%), Gaps = 9/414 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F+ +++ + G+ TPIQ A+P L GRDV G AQTGTGKT AF Sbjct: 1 MSFKQFSFDRRIMAGIHACGYETPTPIQTKAIPEVLKGRDVMGLAQTGTGKTAAFALPIM 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 LL R L++APTRELA+QIH + L G++ +GG G Q+ Sbjct: 61 QRLLEKKFSGQGP---IRVLVLAPTRELALQIHENFMELGVEAGIRSAAVFGGVGAMPQI 117 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + +++ GRL+D Q I L + +VLDEADRM D+GF+ DIR + ++P Sbjct: 118 QAARR-SSVIVACPGRLLDLMNQGVIKLDKVDTLVLDEADRMLDMGFLPDIRKIMSKLP- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+LFSAT+ +R+LA + + ++V ++ + S K LL Sbjct: 176 -QRRQNLLFSATMPDDIRDLADKILYRPATVQVAN-TAPAKTVEHVFYPVSQHLKNNLLF 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E+ D ++F TKH+ + + LAA GH+ L G+++Q +R R LD F G Sbjct: 234 KVLEQTDYDSLLVFTRTKHKAKNLARRLAARGHKATFLQGNMSQNQRQRALDGFRDGSFK 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ++VATD+AARG+ +THV N D+PD E Y HRIGRTGRAG SG + S + + Sbjct: 294 VMVATDIAARGIDCDRITHVVNLDVPDTAETYTHRIGRTGRAGRSGSAFSFVTRDDLRLM 353 Query: 369 PAIETYIGHSIPVSKYNPDALMTDL--PKPLRLTRPRTGNGPRRTGAPRNRRRS 420 IE +G+SI P P + R R+ R R Sbjct: 354 REIEKAVGYSIEHRTLEDFDYDKPNTHPAPAKRGGGRKPAADRKPAGERRPGRG 407 >UniRef50_A5EYB1 ATP-dependent rna helicase Rhl n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYB1_DICNV Length = 432 Score = 551 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 206/430 (47%), Positives = 271/430 (63%), Gaps = 12/430 (2%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 M+ + F+DF +H ++EALE F TPIQA LPLTLAG DV G AQTGTGKT Sbjct: 1 MTNENKNTAHFTDFPIHSALLEALEDIHFTKTTPIQAQTLPLTLAGYDVMGIAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AFL S HYL+++P K P A+++APTRELA+QI + + L TGL YG Sbjct: 61 AAFLLSLMHYLMTNP--VHPKAKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAIYG 118 Query: 121 GDGYDKQLKVLES-GVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 G + Q K+ ++ VD++IGT GR+ID KQ L I+V VLDEADRM+DLGFI D+ Sbjct: 119 GTSIEHQKKLFQACNVDVIIGTPGRIIDLFKQKVFRLKNIEVCVLDEADRMFDLGFIDDV 178 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R+L R+MPPA +RLN+LFSAT+ +V+ELA+E N + + +E +Q T + I L++ + Sbjct: 179 RYLLRQMPPAYERLNLLFSATMPQKVQELAYEHFNAPKVVAIESQQTTANNITHYLYHTA 238 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 EK LL L E P+R++IF NTKH E + L A+G+ L+GDVAQKKR +I+ Sbjct: 239 KHEKTPLLLGLFARERPERSMIFLNTKHDLERLSLVLTANGYHNAALSGDVAQKKREQII 298 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 +F G ++I+VATDVAARG+HI +THVFNYDLP EDYVHRIGRT RAGASG +IS Sbjct: 299 RDFQEGTVNIVVATDVAARGIHIDGITHVFNYDLPQIAEDYVHRIGRTARAGASGTAISF 358 Query: 360 ACEEYALNLPAIETYIGHSIPVSK---------YNPDALMTDLPKPLRLTRPRTGNGPRR 410 ACEEY +LP IE ++G IPV P D + + +R R N R Sbjct: 359 ACEEYVYSLPEIEHFLGEKIPVKPIEESLIVDVIPPSDEALDALRNEKESRIRIHNRGNR 418 Query: 411 TGAPRNRRRS 420 ++ RR Sbjct: 419 KPMTKSIRRR 428 >UniRef50_B4N414 GK13754 n=2 Tax=Bilateria RepID=B4N414_DROWI Length = 839 Score = 551 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 135/425 (31%), Positives = 210/425 (49%), Gaps = 14/425 (3%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 F F ++++A+ K + T IQA A+P LAGRD+ G A+TG+GKT AF Sbjct: 296 PPKPVTSFGHFGFDDQLIKAVRKAEYTQPTSIQAQAVPCALAGRDIIGIAKTGSGKTAAF 355 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 + +L+ + + P LI+APTREL++QI+ +A+ + L++ YGG Sbjct: 356 IWPLLMHLMDQREL--KAGEGPIGLILAPTRELSLQIYNEAKRFGKVYNLRVVCCYGGGS 413 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 +Q K LE G +I++ T GR+ID K NL + +VLDEADRM+ +GF +R + Sbjct: 414 KWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSIC 473 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS-NEE 242 + + P R +LFSAT R+ LA + + + I + + + ++ ++ Sbjct: 474 QHVRPD--RQTLLFSATFKRRIERLARDVLTDPIRIVQGELNEANQDVTQAVYVLPNPQQ 531 Query: 243 KMR-LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K LL L++ +IF K E + L LL GD+ Q R +++ + Sbjct: 532 KWNWLLCHLVKFLAEGSCLIFVTKKADAETVAHQLLVKEFNCLLLHGDMDQADRNKVIMQ 591 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F R + DIL+ATDVAARGL IP + +V NYD+ D + + HRIGRTGRAG G++ +L Sbjct: 592 FKRKECDILIATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAHTLVT 651 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN----- 416 E+ + + + P L+ K R G + P + Sbjct: 652 EKDKEFAGHLVRNLEG---ADQPVPSDLLELAMKSSWFRSSRFKQGKGKKVTPTHVGLGY 708 Query: 417 RRRSG 421 R R G Sbjct: 709 RERGG 713 >UniRef50_C7LND0 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LND0_DESBD Length = 545 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 166/408 (40%), Positives = 235/408 (57%), Gaps = 9/408 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L ++++A++ KG+ T IQA A+P+ LAGRD+ +AQTGTGKT AF Sbjct: 1 MSFDQLGLRVELLKAIKNKGYEAPTAIQAQAIPVILAGRDILARAQTGTGKTDAFGLPIV 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + + PRALI+ PTRELA+Q+ + A L+ +A+GG + Q+ Sbjct: 61 QIL----GLTRGNGHHPRALILTPTRELALQVGESIKAYARKVSLRCTVAFGGVRIEPQI 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 LE G+DIL+ T GRL+D A Q H++L +I+ +V DEADRM DLGF +I + +P Sbjct: 117 ARLERGIDILVATPGRLLDLASQEHLSLASIEFLVFDEADRMLDLGFSGEINAILDLLPT 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R MLFSAT + +++ LA + ++ EYIE+ P+ +++++ + + + K+ LL Sbjct: 177 V--RRTMLFSATYTPQIKALAAKMLDKPEYIEITPDTAAAEAVQQKVHHVNKDNKLPLLL 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LIE++ DR ++FA T+ + LAA G V L G +Q R R L+EF G + Sbjct: 235 HLIEKQKQDRILVFARTRTWANRLTDKLAAHGISVAALHGSKSQSLRKRTLEEFKDGKIH 294 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL I + V NYD+P+ EDYVHRIGRTGRAG SG ++SL E L Sbjct: 295 ILVATDVAARGLDISNLPLVVNYDIPNSPEDYVHRIGRTGRAGVSGIAVSLVSPEERNLL 354 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 AIE + H IPV +D+P + R GN APR Sbjct: 355 LAIEDLLRHQIPVEAVKGFTEDSDVPDFVLY---RPGNPKSERNAPRA 399 >UniRef50_Q3AX69 DEAD/DEAH box helicase-like n=18 Tax=cellular organisms RepID=Q3AX69_SYNS9 Length = 624 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 135/398 (33%), Positives = 209/398 (52%), Gaps = 10/398 (2%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + F F +++ L KG+ + +PIQ A P + GRD+ GQAQTGTGKT AF Sbjct: 67 SEPQSGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFA 126 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDG 123 L + P+ L++APTRELA+Q+ + A LK+ YGG Sbjct: 127 LPLLERL-------ESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTD 179 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 + Q+ L GVD+++GT GR++D+ +Q ++ + +VLDEAD M +GFI D+ W+ Sbjct: 180 FRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWIL 239 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEK 243 ++P +R +LFSAT+ +R L+ +N+ + ++ + + G I++ K Sbjct: 240 EQLP--KERQVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKDQDGKLIRQRAITVPMSHK 297 Query: 244 MRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFT 303 + LQ +++ + IIFA TK + L A GH+V +L GDV Q +R R ++ Sbjct: 298 LEALQRVLDACGGEGVIIFARTKVITLTVAETLEAAGHQVAVLNGDVPQNQRERTVERLR 357 Query: 304 RGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 G +D+LVATDVAARGL + + V NYD+P D E YVHRIGRTGRAG +G ++ Sbjct: 358 SGSVDVLVATDVAARGLDVERIGLVINYDMPFDSEAYVHRIGRTGRAGRTGEAVLFMTPR 417 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 + +E G I + + + + R Sbjct: 418 ERRFIRNLERATGQPIEMMEVPGNTAINQGRLDRLRKR 455 >UniRef50_UPI00016C5336 ATP-dependent RNA helicase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5336 Length = 523 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 138/382 (36%), Positives = 211/382 (55%), Gaps = 8/382 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 F+D L +++A+ G+ N TPIQ +P L G+DV GQAQTGTGKT AFL Sbjct: 84 PAMLFADLKLMRPLMDAITAAGYKNPTPIQENVIPPALRGKDVIGQAQTGTGKTAAFLIP 143 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 + H + P ++M PTRELA+QI +AE LA + + YGG G + Sbjct: 144 FLNRWRPH------TLKGPIGVVMTPTRELALQIANEAEKLAPSKRFRCVPVYGGTGMQR 197 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 QL L G D+++GT GR++D+ ++ ++L ++ VLDEADRM D+GF DI + +R Sbjct: 198 QLDGLTRGCDLVVGTPGRMLDHLQRGSMSLSQVRYAVLDEADRMLDIGFRDDIERILKRC 257 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P ++R +L SAT+ ++ L M + ++ + PE+ T +I++ F + K L Sbjct: 258 P--SERQTLLMSATVPDSIKRLVNRYMRDPVHLHMMPEKPTVDKIRQSYFTVDQDRKFEL 315 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ ++E E P + +IF K + ++ L + ++ GD+ Q +R +I+ F D Sbjct: 316 LKRVVEREKPRQCLIFVERKRWADNLYRDLKRAVPKAAVIHGDLPQSQREKIMAAFRTAD 375 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + L+ATDV +RG+ + ++HV NYDLP D E+YVHRIGRTGR G G +IS E Sbjct: 376 IKYLIATDVMSRGIDVSGLSHVINYDLPMDIENYVHRIGRTGRIGKDGIAISFVLPEQGE 435 Query: 367 NLPAIETYIGHSIPVSKYNPDA 388 +L IE I I + Sbjct: 436 HLTNIEMMINRLIEEDRVEGFE 457 >UniRef50_B0SYC6 DEAD/DEAH box helicase domain protein n=33 Tax=Alphaproteobacteria RepID=B0SYC6_CAUSK Length = 678 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 155/410 (37%), Positives = 217/410 (52%), Gaps = 14/410 (3%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 +FS+ L P ++A+ G+ TPIQA A+P+ LAG+DV G AQTGTGKT AF Sbjct: 1 MTEFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPL 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L++ K PRAL++APTRELA Q+ + E A+ T L L GG + Q Sbjct: 61 IDKLMN----GRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQ 116 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 K L+ GVD+LI T GRL+D+ ++ + + +Q +V+DEADRM D+GFI DI +F+ P Sbjct: 117 EKKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTP 176 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE---KM 244 P + FSAT+ + L + + + IE T I + + + + K Sbjct: 177 PKK--QTLFFSATMPPEITRLTKQFLKDPVRIEASRPATTNENITQLMVKVPSSDPKAKR 234 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L+ LIE+ + I+F N K + + L + G + GD+ Q +R + L F Sbjct: 235 LALRALIEKAQIETGIVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLAAFRD 294 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY 364 G L ILVA+DVAARGL IPAV+HVFNYD+P +DYVHRIGRTGRAG SG + L Sbjct: 295 GSLKILVASDVAARGLDIPAVSHVFNYDVPHHADDYVHRIGRTGRAGRSGVTYMLVTPAD 354 Query: 365 ALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAP 414 + IG + K + D + + R G R AP Sbjct: 355 DKGFDKVVKLIGSTPTEEKLDLDYSGA-----VTIKREGDKRGGGRDRAP 399 >UniRef50_P93008 DEAD-box ATP-dependent RNA helicase 21 n=12 Tax=Viridiplantae RepID=RH21_ARATH Length = 733 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 141/422 (33%), Positives = 208/422 (49%), Gaps = 18/422 (4%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 S+ + + + L ++++A+E+ G+ +PIQ A+PL L RDV G A+TG+GKT Sbjct: 306 SRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTA 365 Query: 62 AFLTSTFHYLLSHPAIADR-KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 AF+ Y+ P +++ + P A++MAPTRELA QI + A G ++ G Sbjct: 366 AFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVG 425 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G ++Q + G +I+I T GRLID ++ + L VVLDEADRM D+GF + Sbjct: 426 GQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVA 485 Query: 181 WLFRRMPPAN---------------QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ 225 + MP +N R +FSAT+ V LA + + N + + Sbjct: 486 GVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAG 545 Query: 226 KTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGL 285 KT I + + EK LQ L++E AI+F NTK C+ I +L G+RV Sbjct: 546 KTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTT 605 Query: 286 LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIG 345 L G +Q++R L+ F ++LVATDV RG+ IP V HV NYD+P E Y HRIG Sbjct: 606 LHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIG 665 Query: 346 RTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 RTGRAG SG + S ++ + S S P+ + + T P Sbjct: 666 RTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQS--NSAVPPELARHEASRFKPGTVPDRP 723 Query: 406 NG 407 Sbjct: 724 PR 725 >UniRef50_Q485D3 ATP-dependent RNA helicase, DEAD box family n=24 Tax=Gammaproteobacteria RepID=Q485D3_COLP3 Length = 455 Score = 550 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 142/426 (33%), Positives = 212/426 (49%), Gaps = 18/426 (4%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 L +++A++ G+ N TPIQ A+P+ G D+ AQTGTGKT AF Sbjct: 1 MSVDSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPIL 60 Query: 69 HYLLS---------------HPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGL 113 + RALI+ PTRELA Q+ + + ++ + Sbjct: 61 DAIAKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPI 120 Query: 114 KLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDL 173 K G+ YGG Q K+L+ G+D+L+ T GRL+++ +++L ++ +VLDEADRM D+ Sbjct: 121 KSGVVYGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDM 180 Query: 174 GFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKE 233 GF+ DI L + ++ ++FSAT S RV+ LA + + + + I V E T +IK+ Sbjct: 181 GFLTDIEKLL--LAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQ 238 Query: 234 ELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQK 293 +++ + E K LL LI + ++FA TK + L DG + L GD Q Sbjct: 239 AVYWVTEERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQG 298 Query: 294 KRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGAS 353 R + L++F+ G + +LVATDVAARGL IP + V N+ LP EDYVHR+GRTGRAG S Sbjct: 299 ARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKS 358 Query: 354 GHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMT-DLPKPLRLTRPRTGNGPRRTG 412 G +ISL + L IE I + + T R R Sbjct: 359 GTAISLVSPKDERFLENIEQLIERKFERIVAPGYEFNRLEASEYQEATVKRDSKNRYRAA 418 Query: 413 APRNRR 418 +N+ Sbjct: 419 QEKNQN 424 >UniRef50_UPI0000E87E35 putative ATP-dependent RNA helicase protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87E35 Length = 427 Score = 550 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 132/416 (31%), Positives = 211/416 (50%), Gaps = 11/416 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F F L +++A+++ G+ TPIQ ++P + + V AQTGTGKT AF+ Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L + + PR LI++PTRELA QI + + + GG Y Q Sbjct: 61 DKLTKN----RSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQN 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 ++ +DIL+ T GRL+D +Q IN ++V++LDEADRM D+GF+ DIR ++ Sbjct: 117 RMFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNAT-- 174 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS-NEEKMRLL 247 + ++ ++FSAT ++++A E + N I ++P+ IK+ +++ K ++L Sbjct: 175 SKKQQMLMFSATFDPPIQKIAQEFLTNPVTISIKPDVSGHKNIKQLIYFADNQSHKQQML 234 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 I+ + +AIIF TK +++ L + L GD++Q R + ++ F R + Sbjct: 235 DHFIKNDEVTQAIIFTATKRMADQLSDQLYHSDIKTSALHGDMSQGSRTKTINRFKRNET 294 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATD+A+RG+ + ++HVFNYD+P EDY+HRIGRTGRA G +ISL Sbjct: 295 KILVATDLASRGIDVKNISHVFNYDMPRFAEDYIHRIGRTGRANNKGIAISLVSPTDREF 354 Query: 368 LPAIETYIGHSIPVSKYNPDAL----MTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419 L IE + I ++ PK R G ++R Sbjct: 355 LRKIERFTNLKIEIASIPGMEATILKEAKAPKRKSKGRSFVKKGKVFKNEANAKKR 410 >UniRef50_Q31AC4 DEAD/DEAH box helicase-like protein n=9 Tax=Prochlorococcus marinus RepID=Q31AC4_PROM9 Length = 593 Score = 550 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 138/389 (35%), Positives = 203/389 (52%), Gaps = 10/389 (2%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 E F DF + ++ +L KG+ N TPIQ A+P + GRD+ GQAQTGTGKT AF Sbjct: 49 NENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALP 108 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYD 125 L + + + L+M PTRELA Q+ + + +T K YGG Y Sbjct: 109 LIEKLADNKELNAK------VLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYR 162 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+ L+ VD+++GT GR++D+ +Q + +I +VLDEAD M ++GF++DI W+ + Sbjct: 163 NQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQ 222 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P +LFSAT+ +R +A + +N+ I ++ +K I ++ Y K+ Sbjct: 223 LPKNK--QMVLFSATMPNEIRNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLD 280 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ ++E IIF TK I L GH V +L GD+ Q +R +D +G Sbjct: 281 ALKRILELNNEG-VIIFVRTKLLTTSIAEALENLGHSVAVLNGDIPQNQRENTVDRLKKG 339 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 +DILVATDVAARGL + + V NYD P D E Y HRIGRTGRAG SG +I Sbjct: 340 FIDILVATDVAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNHREK 399 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLP 394 L +E I + ++ + Sbjct: 400 HFLRNLENSTRTKIEEINIPSNKIINEKR 428 >UniRef50_C9DQK7 VASA DEAD-box protein n=5 Tax=Chordata RepID=C9DQK7_9ASCI Length = 851 Score = 550 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 134/422 (31%), Positives = 209/422 (49%), Gaps = 9/422 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F L + +++ + + TP+Q +LP+ LA RD+ AQTG+GKT A Sbjct: 378 NAPKFINSFEAANLPETIAANVKRANYDSPTPVQKFSLPIILADRDLMACAQTGSGKTAA 437 Query: 63 FLTSTFHYLLSHPAIADR--KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 FL L+ + + P+A+I+ PTREL QI+ +A + T ++ +AYG Sbjct: 438 FLLPVLTNLVRTGLASSSFSEKQLPQAIIVGPTRELVYQIYLEARKFSRGTIIRPVVAYG 497 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G + QLK L+ G +LI T GRL+D+ + I L ++Q ++LDEADRM D+GF +IR Sbjct: 498 GTSTNYQLKELQKGCHLLIATPGRLMDFINRGKIGLSSVQYIILDEADRMLDMGFETEIR 557 Query: 181 WLFRR--MPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVEPEQKTGHRIKEELFY 237 L MP N+R ++FSAT +++LA + + + ++ V + + + Sbjct: 558 KLVDSPGMPAKNERHTLMFSATFPDEIQKLAHDFLREDFLFLTVGRIGGACSDVTQVVLQ 617 Query: 238 PSNEEKMRLLQTLIEE--EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKR 295 +K L L+ + + R ++F TK + + L +G+ + GD Q++R Sbjct: 618 VDQGDKRNKLIELLADVADTGSRTLVFVETKRSADFLACSLCQEGYPTTSIHGDRLQQER 677 Query: 296 LRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGH 355 L +F G ILVAT VAARGL IP V HV NYDLP + ++YVHRIGRTGR G G Sbjct: 678 EEALRDFKSGKCPILVATSVAARGLDIPKVEHVVNYDLPSEVDEYVHRIGRTGRCGNLGR 737 Query: 356 SISLACEE-YALNLPAIETYIGHSIPVSKYNPDA-LMTDLPKPLRLTRPRTGNGPRRTGA 413 + S + A ++ + SI + + + R G R G Sbjct: 738 ATSFYDDSANASLARSLVKILADSIQEVPSWLEECAESAVGTSFGKDRGGFGGRDTRRGN 797 Query: 414 PR 415 + Sbjct: 798 FK 799 >UniRef50_Q11039 Cold-shock DEAD box protein A homolog n=27 Tax=Bacteria RepID=DEAD_MYCTU Length = 563 Score = 550 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 135/389 (34%), Positives = 199/389 (51%), Gaps = 12/389 (3%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + F+D +HP+V+ A+ G+ + T IQA +P +AG DV G AQTGTGKT AF Sbjct: 8 PAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAF 67 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGD 122 + D P+AL++ PTRELA+Q+ L + YGG Sbjct: 68 AIPMLSKI-------DITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGS 120 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y QL L G +++GT GR+ID+ ++ ++L + +VLDEAD M +GF D+ + Sbjct: 121 SYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERI 180 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 P LFSAT+ +R+L+ + +++ + + + I + + Sbjct: 181 LSETPEYK--QVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR-- 236 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 KM L ++E E + I+F TK EEI L A G ++GDV Q +R R + Sbjct: 237 KMDALTRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITAL 296 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 GD+DILVATDVAARGL + ++HV NYD+P D E YVHRIGRTGRAG SG ++ Sbjct: 297 RDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSP 356 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMT 391 L AIE ++ ++ + Sbjct: 357 RELHLLKAIEKATRQTLTEAQLPTVEDVN 385 >UniRef50_Q9NXZ2 Probable ATP-dependent RNA helicase DDX43 n=23 Tax=Euteleostomi RepID=DDX43_HUMAN Length = 648 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 145/413 (35%), Positives = 215/413 (52%), Gaps = 14/413 (3%) Query: 10 KFSD-FALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F D F +P+V+E ++K GF TPIQ+ A P+ L G D+ G AQTGTGKT+ +L F Sbjct: 242 TFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGF 301 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 +L+ P++ ++ P L++ PTRELA+Q+ + + GL+ YGG D+Q+ Sbjct: 302 IHLVLQPSLKGQRNR-PGMLVLTPTRELALQVEGECCKYS-YKGLRSVCVYGGGNRDEQI 359 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ GVDI+I T GRL D N +NL I +VLDEAD+M D+GF I + + P Sbjct: 360 EELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRP 419 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSNEEKMRLL 247 R ++ SAT + V LA + + V + +K+ + + EEK + Sbjct: 420 D--RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHM 477 Query: 248 QTLIEEEW-PDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 QT ++ D+ I+F + K + + L V L GD Q+ R + L+ F G Sbjct: 478 QTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGK 537 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + IL+ATD+A+RGL + VTHV+N+D P + E+YVHRIGRTGRAG +G SI+ Sbjct: 538 VRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWR 597 Query: 367 ---NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRN 416 L I SIP + M + K + R R G P+ Sbjct: 598 VASELINILERANQSIPEELVS----MAERFKAHQQKREMERKMERPQGRPKK 646 >UniRef50_C5PZD1 ATP-dependent RNA helicase n=5 Tax=Bacillales RepID=C5PZD1_STAAU Length = 517 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 139/410 (33%), Positives = 215/410 (52%), Gaps = 11/410 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 Q F + + V++LE GF TPIQ ++P L G D+ GQAQTGTGKT AF Sbjct: 13 QNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLI 72 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 ++ ++LI+APTRELA+Q+ + G+++ +GG ++Q+ Sbjct: 73 EKVVGK--------QGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQI 124 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 K L+ G I++GT GR+ID+ + + I ++LDEAD M ++GFI D+R++ ++P Sbjct: 125 KALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPA 184 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 QR MLFSAT+ ++ L + M + + I+ + + +I+E EK Sbjct: 185 V-QRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFT 243 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++ P+ AI+F TK R +E+ L + G++ L GD+ Q KRL +L +F ++ Sbjct: 244 NFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIN 303 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ILVATDVAARGL I V+HV+N+D+P D E Y HRIGRTGRAG G +++ + Sbjct: 304 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 363 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 IE G + P L + + N + R +R Sbjct: 364 RQIEDANGRKMSA--LRPPHRKEVLQAREDDIKEKVENWMSKKSESRLKR 411 >UniRef50_A8TFK3 DEAD/DEAH box helicase domain protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFK3_METVO Length = 584 Score = 549 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 139/398 (34%), Positives = 210/398 (52%), Gaps = 4/398 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGR-DVAGQAQTGTGKTMAFLTST 67 +F D + ++E L++KGF T IQ A+P+ L DV GQAQTGTGKT+AF Sbjct: 1 MEFRDLNISESIMERLDEKGFTEATQIQEKAIPIVLDTELDVVGQAQTGTGKTLAFGIPI 60 Query: 68 FHYLLSHPAIADRKVNQ-PRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 + RK + +A+I+ PTRELA+Q+H + + + + L+L YGG +K Sbjct: 61 IQKIQEKIEENGRKNKKAVKAIILTPTRELALQVHDEIDSVNKGNKLRLCTVYGGQSIEK 120 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+ L +GVDI+IGT GR+ID+ + + L I +VLDEAD M +LGFI D+ + + Sbjct: 121 QINKLRNGVDIVIGTPGRVIDHLGRRTLKLNEIDFLVLDEADEMLNLGFIDDVEEIMSKC 180 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 ++ +LFSATL + EL M E I V+ + T ++ + +K L Sbjct: 181 KEDCRK--LLFSATLPKSIMELVELHMGEYETIRVKSKALTTELTEQIYYEVKEHDKFEL 238 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ +I++E ++F TK +++ L + + L GD+ QK+R L F Sbjct: 239 LRRIIDKEPGFYGLVFCKTKADVDQLMRRLNDENYSSEALHGDMNQKQRELALSRFKSHK 298 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 +DI++ATDVAARG+ I +THV NYD+P + E YVHRIGRTGRAG G +I+ Sbjct: 299 IDIMIATDVAARGIDINELTHVINYDIPQNPEAYVHRIGRTGRAGNKGTAITFVEPREFR 358 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 I K + +L K + + + Sbjct: 359 RFKYIMKISKSDAKKEKIPDVTEIVELTKTNIIGKLKQ 396 >UniRef50_Q388E8 ATP-dependent DEAD/H RNA helicase, putative n=4 Tax=Trypanosoma RepID=Q388E8_9TRYP Length = 660 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 130/396 (32%), Positives = 203/396 (51%), Gaps = 14/396 (3%) Query: 1 MSKTH---LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGT 57 M+ T FS+ + P ++E +++ G+ TP+Q+L +P L RD+ AQTG+ Sbjct: 146 MTITPNDIAPVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMACAQTGS 205 Query: 58 GKTMAFLTSTFH----YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGL 113 GKT ++L + + + P + + P+ALI+APTREL++QI+ +A T + Sbjct: 206 GKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFTYHTPV 265 Query: 114 KLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDL 173 + + YGG Q+ L G +L+ T GRL+D + ++ I+ ++LDEADRM D+ Sbjct: 266 RCVVVYGGADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLDM 325 Query: 174 GFIKDIRWLF----RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGH 229 GF IR + MP A QR +L+SAT ++ LA E M +++V T Sbjct: 326 GFEPQIRMIVQGPDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVGSTTE 385 Query: 230 RIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGD 289 I +++ + + +K + L TL+ E ++F K + + L + GD Sbjct: 386 NITQDVRWIEDPDKRQALLTLLRENEGKLVLVFVEKKRDADYLERFLRNSELACVSIHGD 445 Query: 290 VAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGR 349 Q++R L F G +LVATDVA+RGL IP V V YD+P + +DYVHRIGRTGR Sbjct: 446 RVQREREEALRLFKSGACQVLVATDVASRGLDIPNVGVVIQYDMPSNIDDYVHRIGRTGR 505 Query: 350 AGASGHSISLACEEYAL---NLPAIETYIGHSIPVS 382 AG G +IS E+ +L + I Sbjct: 506 AGKVGVAISFFNEKNRNIVDDLIPLLNETNQVISPE 541 >UniRef50_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFI3_CARHZ Length = 430 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 131/394 (33%), Positives = 215/394 (54%), Gaps = 10/394 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 ++F L +++A+ GF TPIQ A+PL L G ++ GQA TGTGKT A+L Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + ++ + + LI+ PTRELA+Q+ + L + ++ YGG ++Q Sbjct: 61 LQRI--------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQ 112 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L GV++++GT GR++D+ + I++V+LDEAD M D+GFI DI + + Sbjct: 113 IRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTL- 171 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 N++ +LFSATL ++ + + + + +++ +KT I++ + EK+ L Sbjct: 172 -TNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGL 230 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 +++ E P +AI+F TK R +E+ L G+ L GD++Q++R + + F G Sbjct: 231 VSILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKT 290 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ++LVATDVAARGL IP V+HV N+D+P + E Y+HRIGRTGRAG G +I+L Sbjct: 291 ELLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKL 350 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L AIE I + + + + Sbjct: 351 LKAIEEAINKRLKREILPEPVDLEEARFKKIAKK 384 >UniRef50_Q12QV2 DEAD/DEAH box helicase-like protein n=27 Tax=Gammaproteobacteria RepID=Q12QV2_SHEDO Length = 433 Score = 549 bits (1415), Expect = e-155, Method: Composition-based stats. Identities = 140/406 (34%), Positives = 210/406 (51%), Gaps = 5/406 (1%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 KF F+ P+++ A+ + G+ N TP+Q A+P G DV AQTGTGKT AF Sbjct: 1 MKFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + P RALI+ PTRELA Q+ + ++ + + YGG Q Sbjct: 61 QKMHERPMTVQHSNA--RALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQA 118 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ G DI++ T GRL+++ +++L ++ +VLDEADRM D+GF DI+ + + + Sbjct: 119 QKLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAV-- 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R N+LFSAT S V++LA + ++ + I + + T + + ++ K LL Sbjct: 177 NKKRQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAATVSQVVYPVEQRRKRELLS 236 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 LI + + ++F T+ +++ L DG ++ G+ AQ R R L EF G + Sbjct: 237 ELIGTKNWQQVLVFTATRADADKLVTELNLDGIPSAVVHGEKAQGSRRRALREFIEGKVR 296 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVAT+VAARGL I + +V NYDLP EDYVHRIGRTGRAG +G +IS E L Sbjct: 297 VLVATEVAARGLDIQGLEYVVNYDLPFLAEDYVHRIGRTGRAGKTGVAISFVSREEERTL 356 Query: 369 PAIETYIGHSIPVSKYNPDALMT-DLPKPLRLTRPRTGNGPRRTGA 413 IE IG I + + +L R G R Sbjct: 357 ADIEKLIGQKIRRITVPGYEVSSRELLLKTIEKRRSFGKKQERNDN 402 >UniRef50_Q4UPY5 ATP-dependent RNA helicase rhlB n=186 Tax=Gammaproteobacteria RepID=RHLB_XANC8 Length = 573 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 225/401 (56%), Positives = 275/401 (68%), Gaps = 2/401 (0%) Query: 1 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60 MS LT+ FS F LHP +V LE GF CTPIQAL LP+ L G DVAGQAQTGTGKT Sbjct: 1 MSDKPLTDLTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKT 60 Query: 61 MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 +AFL + + LL PA+ADRK PRALI+APTRELA+QIH DA GL+ L YG Sbjct: 61 LAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG 120 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQ-NHINLGAIQVVVLDEADRMYDLGFIKDI 179 G YDKQ ++L+ GVD++I T GRLIDY KQ ++L A ++ VLDEADRM+DLGFIKDI Sbjct: 121 GVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI 180 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 R+L RRMP R +LFSATLS+RV ELA+E MN E + VE E T R+++ +++PS Sbjct: 181 RFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPS 240 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 +EEK LL L+ R ++F NTK E + L G+RVG+L+GDV QKKR +L Sbjct: 241 DEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLL 300 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 + F +G L+ILVATDVAARGLHI V +V+NYDLP D EDYVHRIGRT R G G +IS Sbjct: 301 NRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF 360 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 ACE YA++LP IE YI IPV L+T LP+ R T Sbjct: 361 ACERYAMSLPDIEAYIEQKIPVEPVTT-ELLTPLPRTPRAT 400 >UniRef50_Q0K893 ATP-dependent RNA helicase n=129 Tax=Proteobacteria RepID=Q0K893_RALEH Length = 646 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 151/419 (36%), Positives = 214/419 (51%), Gaps = 25/419 (5%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 + E F+ L ++ AL + ++ TP+QA A+P LAGRD+ +QTG+GKT Sbjct: 51 EEAPAVESGFATLGLDAAILRALSELNYNTPTPVQAQAIPAFLAGRDLLVSSQTGSGKTA 110 Query: 62 AFLTSTFHYLLSHPAI--------------ADRKVNQPRALIMAPTRELAVQIHADAEPL 107 AF+ + PA QP L++ PTRELA+Q+ A Sbjct: 111 AFMLPAIQRISEMPAPQRATEPAKRMKGKRPRPSPAQPALLVLTPTRELALQVTEAAAKY 170 Query: 108 AEATG-LKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDE 166 + GG Y KQL L DIL+ T GRL+D+ I+L A+Q++V DE Sbjct: 171 GRNLRRIVCASILGGMPYPKQLAALAKMPDILVATPGRLLDHIDAGRIDLSALQMLVFDE 230 Query: 167 ADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQK 226 ADRM D+GF DI + P R ++FSATL R+ +LA Q+ + + IE+ + Sbjct: 231 ADRMLDMGFADDIDAIVNATPAT--RQTLMFSATLDARIAQLASRQLRDPQRIEIAAARA 288 Query: 227 TGHRIKEELFYPSN-EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGL 285 I++ L + + K RLL L+ + +AI+F TK + + L+ G G Sbjct: 289 DQSHIEQRLHFTDDMSHKERLLDHLLRDATLKQAIVFTATKRDADSLAERLSDTGFSAGA 348 Query: 286 LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIG 345 L GD+ Q R R L RG+L +LVATDVAARG+ +P +THV N+DLP EDYVHRIG Sbjct: 349 LHGDMTQGARNRTLTALRRGNLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIG 408 Query: 346 RTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 RTGRAG SG +I+L IE + I DA + + +P R +PR+ Sbjct: 409 RTGRAGRSGTAINLVNHNDMFQWKRIERFTNQRI-------DASVIEGLEPRRSPKPRS 460 >UniRef50_UPI00015B57D6 PREDICTED: similar to DEAD box ATP-dependent RNA helicase n=1 Tax=Nasonia vitripennis RepID=UPI00015B57D6 Length = 715 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 147/416 (35%), Positives = 212/416 (50%), Gaps = 13/416 (3%) Query: 3 KTHLTEQKFSD-FALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 K Q F F +P ++ + K+ F +PIQ A P+ L+G+D+ G AQTGTGKT+ Sbjct: 267 KIPNPVQTFEQAFRNYPDILVEIRKQNFEKPSPIQCQAWPILLSGKDMIGIAQTGTGKTL 326 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AFL ++ + + P L+MAPTRELA+QI + G+K YGG Sbjct: 327 AFLLPALIHIDNQDTPRSERS-GPTVLVMAPTRELALQIEKEVNKY-YYHGIKAVCVYGG 384 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 KQ+ ++ GV+I+I T GRL D + +++ + +VLDEADRM D+GF IR Sbjct: 385 GDRKKQMNIVSKGVEIVIATPGRLNDLIQTEVLDVKCVSYLVLDEADRMLDMGFEPQIRK 444 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSN 240 + P R ++ SAT VR LA M + + V + K H + ++++ Sbjct: 445 SLLDIRPD--RQTVMTSATWPPGVRRLAESYMKSPITVCVGSLDLKAVHSVTQKIWIVDE 502 Query: 241 EEKMRLLQTLIEEEWP-DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 EEK +L+ P D+ I+F K + ++I LA G + G Q R + L Sbjct: 503 EEKTDVLKDFFHNMAPSDKVIVFFGKKCKVDDIGSDLALSGVACQSIHGGREQADREQAL 562 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 ++ GD++IL+ATDVA+RG+ I +THVFNYD P D E+YVHR+GRTGRAG +G SISL Sbjct: 563 EDIKTGDVNILLATDVASRGIDIEDITHVFNYDFPRDIEEYVHRVGRTGRAGKTGESISL 622 Query: 360 ACEEYA---LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG 412 L I IP Y+ + K R G+G RR Sbjct: 623 VTRRDWGLTKELIKILEEAEQEIPTELYSMSERYEAMKKKRDEER---GDGDRRES 675 >UniRef50_A6DIU5 Probable ATP dependent RNA helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIU5_9BACT Length = 537 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 134/386 (34%), Positives = 214/386 (55%), Gaps = 10/386 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLA-GRDVAGQAQTGTGKTMAFLTSTF 68 KF+ L P + + LE KGF +PIQ A+P+ L+ D+ GQAQTGTGKT AF Sbjct: 3 KFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIV 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 + + + +P+ALI+ PTRELA+Q++ + + + G+ YGG Q Sbjct: 63 QKI-------EPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQK 115 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 + L+ GVD+++ T GR I + + + L +++ +VLDEAD M ++GF++D+ + + P Sbjct: 116 RALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPD 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 R ++FSAT+ R++++A M+N+ I+ + E T I + ++ E K L Sbjct: 176 D--RTVLMFSATMPPRLKKIAESYMHNSITIKAKSETMTMETIDQVVYEAYPENKFAALC 233 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 +++ E IIF TK E++ LA +G+ + GDVAQ+ R R+L F ++ Sbjct: 234 RIMDLEKDFYGIIFCRTKVEVEKVSAGLANEGYAADYIHGDVAQESRERLLKRFRNRNIS 293 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +L+ATDVAARG+ + ++H+ N+ LP+ E YVHRIGRTGRAG +G +I+L + + Sbjct: 294 LLIATDVAARGIDVTDLSHIVNFSLPEQFESYVHRIGRTGRAGKTGTAITLITPKERSKM 353 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLP 394 IE G K M L Sbjct: 354 SFIEKKTGAKTERRKLPFGEEMIKLR 379 >UniRef50_Q30PP0 DEAD/DEAH box helicase-like protein n=11 Tax=Bacteria RepID=Q30PP0_SULDN Length = 540 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 133/386 (34%), Positives = 211/386 (54%), Gaps = 10/386 (2%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 ++T F D L +++ +++ GF +PIQA A+P LAGRD+ GQA TGTGKT Sbjct: 7 TQTEEKLITFDDLGLKKEILRSVKDAGFTVPSPIQAAAIPFILAGRDIVGQAHTGTGKTA 66 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AF + + + L++ PTRELA Q+ + G + YGG Sbjct: 67 AFGLPALNNIN--------PNDGVGILVITPTRELATQVSDELFKYGRNIGARTVTVYGG 118 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y++Q+ +++ G +++ T GRL+D K+N + A +VVLDEAD M D+GF+ DI Sbjct: 119 SSYNRQIDLIQRGASVVVATPGRLLDILKKNLLKDFAPSIVVLDEADEMLDMGFLDDINE 178 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 +F +P R +LFSAT+ ++ LA ++N E+I + + T I +E + Sbjct: 179 IFSYLPSN--RQTLLFSATMPKPIKLLAERILDNPEFISITKGETTNTDINQEYYVIEES 236 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 E+ + L++ E ++I+F TK + + L++ G+ L GD+ Q++R ++ Sbjct: 237 ERDDAIIRLMDAEACQKSIVFCRTKSEVDRLSNVLSSAGYLANGLHGDMEQRQRETVIKG 296 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F + +LVATDVAARG+H+ ++HVFNY +P D E YVHRIGRTGRAG G +I+L Sbjct: 297 FKNNGVKVLVATDVAARGIHVDNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLT 356 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPD 387 L I+T +G ++ + Sbjct: 357 PLEFKELQRIKTKVGTTMTHAFVPSK 382 >UniRef50_Q9P7C7 Pre-mRNA-processing ATP-dependent RNA helicase prp11 n=1 Tax=Schizosaccharomyces pombe RepID=PRP11_SCHPO Length = 1014 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 121/404 (29%), Positives = 191/404 (47%), Gaps = 11/404 (2%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 +S L + + + G+ T IQA A+P +GRDV G A+TG+GKT+AFL Sbjct: 414 PKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFL 473 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 F ++ + + P A+IM PTRELAVQI + +P + ++ AYGG Sbjct: 474 LPMFRHIKDQRPL--KTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPI 531 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQ---NHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q+ L+ G +I++ T GR+ID NL +VLDEADRM+DLGF + Sbjct: 532 KDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMR 591 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + P R +LFSAT + LA + + I V +++ + E Sbjct: 592 IINNIRPD--RQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEE 649 Query: 242 EKMRLLQTLIEEEWPD----RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLR 297 K L L+ E + + R ++F + + + + L G+ + G Q R Sbjct: 650 SKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDS 709 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 + ++ G D+L+AT V ARGL + ++ V NYD P+ EDYVHR+GRTGRAG +G ++ Sbjct: 710 TISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAV 769 Query: 358 SLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 + E I + S L + + ++ + Sbjct: 770 TFITPEQEKYAVDIAKALKMSKQPVPKELQTLASQFLEKVKAGK 813 >UniRef50_B9ETM9 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=B9ETM9_ORYSJ Length = 468 Score = 547 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 141/424 (33%), Positives = 200/424 (47%), Gaps = 50/424 (11%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 ++F D V++ + K GF TPIQ+ P+ L GRD+ G A+TG+GKT+A Sbjct: 85 DVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 144 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 +L ++ + P +A + P L++APTRELAVQI +A Sbjct: 145 YLLPAIVHVNAQPILA--PGDGPIVLVLAPTRELAVQIQQEATKF--------------- 187 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 GV+I+I T GRLID + +H NL + +VLDEADRM D+GF I+ + Sbjct: 188 -----------GVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKI 236 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQ-KTGHRIKEELFYPSNE 241 ++ P R + +SAT V +LA + + + + E+ K H I + + S Sbjct: 237 VSQIRPD--RQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSES 294 Query: 242 EKMRLLQTLIEE-EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 +K L L+E+ R +IF +TK C++I L DG + GD +Q +R +L Sbjct: 295 QKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLS 354 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 EF G I+ ATDVAARGL + V +V NYD P EDYVHRIGRTGRAGA G + + Sbjct: 355 EFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFF 414 Query: 361 CEEYAL---NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNR 417 A +L I G + P R P R R Sbjct: 415 TAANARFAKDLINILEEAGQKVS---------------PELANMGRGAPPPSSGHRDRYR 459 Query: 418 RRSG 421 G Sbjct: 460 GYGG 463 >UniRef50_B7S475 Predicted protein n=2 Tax=Bacillariophyta RepID=B7S475_PHATR Length = 575 Score = 547 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 134/387 (34%), Positives = 194/387 (50%), Gaps = 12/387 (3%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 +F D ++ +A + GF T IQ A P+ L +D+ A+TG+GKT FL Sbjct: 134 PDPFMEFKDAPFQERIQQAFAQAGFARPTSIQGQAWPIALQNKDMICVAKTGSGKTCGFL 193 Query: 65 TSTF-HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 F +L+ I +P L++APTREL+VQI +A+ G++ YGG Sbjct: 194 LPVFHQHLVKQTRIQGFT--KPILLVLAPTRELSVQILEEAQKFGRPLGIRSVCCYGGAS 251 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 Q+ L+ GV+ +I T GRL D + +L +Q +VLDEADRM D+GF IR + Sbjct: 252 KHPQIAALQRGVECVIATPGRLNDLIEMRKADLSKVQYLVLDEADRMLDMGFEPQIRSII 311 Query: 184 RRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQK--TGHRIKEELFYPSNE 241 +PP R +LFSAT ++ LA + + N I V I++ + S Sbjct: 312 LNIPP-ENRQTLLFSATWPKEIQALAHDFLKNPIQINVGEVNALVANKDIQQTIVMCSES 370 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 EK+ L+ ++ + + I+F K C ++ L DG V L GD Q +R R++ Sbjct: 371 EKLDKLEQILRDLMHGKIIVFVAKKISCNDLANRLWEDGFAVDSLHGDRPQWERTRVMQA 430 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLP---DDCEDYVHRIGRTGRAGASGHSIS 358 F G L +L+ATDVAARGL + V V NYD+P + EDYVHRIGRTGRAG G + + Sbjct: 431 FKGGQLRVLIATDVAARGLDVKDVGVVVNYDMPSGVNGVEDYVHRIGRTGRAGNKGKAYT 490 Query: 359 LACEEYAL---NLPAIETYIGHSIPVS 382 + L + T IP Sbjct: 491 FFTQGDRKNATQLVQVLTKAQQEIPPE 517 >UniRef50_B8I5B1 DEAD/DEAH box helicase domain protein n=2 Tax=Clostridium RepID=B8I5B1_CLOCE Length = 542 Score = 547 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 137/419 (32%), Positives = 217/419 (51%), Gaps = 14/419 (3%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 F++ + +++A++ GF T +Q+ A+P L D+ ++TG+GKT F S Sbjct: 2 NNTFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSI 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + + + P+ LI+ P RELAVQ+ D +A+ K YG + + Sbjct: 62 LQ-------LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLE 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++L GV I+ GT GR+ D+ ++ I+ +VLDEADRM D+GF+ + + + +P Sbjct: 115 TQILNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R+ +LFSAT+ + + MNN IE+E + KT I + + + EK L Sbjct: 175 --KERITLLFSATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVYYRVNYNEKNTQL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L+ E P+ +IF NTK + + L G+ L GD+ Q KRL + +F +G Sbjct: 233 NRLLIVEKPESCMIFCNTKAAVDRVQSFLGKKGYSSRALHGDIPQSKRLNTIQQFKQGKF 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARG+HI ++ V NYD+P+D ++YVHRIGRTGRAG G + SL + ++ Sbjct: 293 HILVATDVAARGIHIEDLSLVINYDVPNDKDNYVHRIGRTGRAGHEGRAFSLVTGDDIIS 352 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRL---TRPRTGNGPRRTGAPRN--RRRSG 421 L IE +IG I + + T + PR A + ++R+G Sbjct: 353 LYEIEEHIGTLILEEELPDEEAFTKAREEAAQWIKANSLKEKAPRSASADSSVKQKRTG 411 >UniRef50_C4QME8 DEAD box ATP-dependent RNA helicase, putative n=7 Tax=Fungi/Metazoa group RepID=C4QME8_SCHMA Length = 1544 Score = 547 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 123/418 (29%), Positives = 202/418 (48%), Gaps = 12/418 (2%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 + + + +++ L++ F TPIQ ALP+ ++GRD+ G A+TG+GKT+AFL Sbjct: 846 PKPLRNWVQAGISSRLLACLKRNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFL 905 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 +L + + P AL++APTRELA+QI + + L +A + YGG G Sbjct: 906 VPLMRHLEHQAPLN--PGDGPIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGI 963 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQ---NHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 +Q+ L+ G +I++ T GR+ID NL VVLDEADRM+DLGF + Sbjct: 964 SEQIAELKRGAEIIVCTPGRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMR 1023 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + P R ++FSAT ++ LA + + I++ +++ F S E Sbjct: 1024 IIENCRPD--RQTLMFSATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEE 1081 Query: 242 EKMRLLQTLIE-EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EK+ + L+ + ++F + +E+ L G+ L G + Q R ++ Sbjct: 1082 EKVYKVLELLGIYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIM 1141 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F RG++ +L+AT VAARGL + + V NYD P+ EDYVHR GRTGRAG G + + Sbjct: 1142 DFKRGNIRLLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFL 1201 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 + + + S P + ++ ++ G + R + Sbjct: 1202 TPDQERSAGDVVRAFKQS----GQKPPEELMNMWNAYKIRMEHEGKKVYGSSGFRGKG 1255 >UniRef50_Q9GV13 Vasa-related protein CnVAS1 n=6 Tax=Eumetazoa RepID=Q9GV13_HYDMA Length = 797 Score = 547 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 135/416 (32%), Positives = 211/416 (50%), Gaps = 7/416 (1%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 ++F++ + ++E +EK + TP+Q A+P+ RD+ AQTG+GKT AFL Sbjct: 349 PSAIREFAEANIDRTILENVEKAHYIKPTPVQKYAIPIITGNRDLMSCAQTGSGKTAAFL 408 Query: 65 TSTFHYLLSHPAI---ADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 + L+ + + +V P AL++APTRELAVQI +A A+ T +K + YGG Sbjct: 409 IPVLNTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQIQKEARKFAQNTSIKPVVIYGG 468 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 L+ ++ +L+GT GRL D+ + I+L ++ ++LDEADRM D+GF+ +I+ Sbjct: 469 VQVAYHLRQVQQDCHLLVGTPGRLKDFLGKRKISLANLKYLILDEADRMLDMGFLPEIKA 528 Query: 182 LFRR--MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + MPP R ++FSAT ++ LA E +NN Y+ + T I + + Sbjct: 529 IINDFDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTIGKVGGTHSDITQCIMEVE 588 Query: 240 NEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRIL 299 K L +++ E +R ++F TK + + +L +G + GD Q++R L Sbjct: 589 ESAKRDKLIEILDTEGTNRNLVFVQTKRLADFLASYLCQNGFHTTSIHGDRLQQQREEAL 648 Query: 300 DEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISL 359 EF G +L+AT VAARGL I V V NYDLPD+ E+Y+HRIGRTGR G G +IS Sbjct: 649 AEFKAGTQHVLIATAVAARGLDIADVKQVINYDLPDEIEEYIHRIGRTGRIGNKGKAISF 708 Query: 360 ACE-EYALNLPAIET-YIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGA 413 + A+ V + +A + L R + R Sbjct: 709 FTRGKDEGLARALVKTLADAEQEVPSWLEEAAESALGTGYGPKGGRFASKDSRFNN 764 >UniRef50_P09052 ATP-dependent RNA helicase vasa n=39 Tax=Eumetazoa RepID=VASA_DROME Length = 661 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 125/383 (32%), Positives = 202/383 (52%), Gaps = 7/383 (1%) Query: 2 SKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 S Q F+ L +++ + K G+ TPIQ ++P+ +GRD+ AQTG+GKT Sbjct: 238 SDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTA 297 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AFL LL P + ++ +P+ +I++PTRELA+QI +A A + LK+G+ YGG Sbjct: 298 AFLLPILSKLLEDPH--ELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGG 355 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 + Q + + G ++I T GRL+D+ + I + VVLDEADRM D+GF +D+R Sbjct: 356 TSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRR 415 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + + ++FSAT ++ +A E + N ++ + +K+ ++ + Sbjct: 416 IMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKY 475 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K L ++ E+ I+F TK + + L+ + GD Q +R + L + Sbjct: 476 AKRSKLIEILSEQADG-TIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRD 534 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +L+AT VA+RGL I + HV NYD+P +DYVHRIGRTGR G +G + S Sbjct: 535 FKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFD 594 Query: 362 EEYAL----NLPAIETYIGHSIP 380 E +L I G ++P Sbjct: 595 PEKDRAIAADLVKILEGSGQTVP 617 >UniRef50_UPI000192615D PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 n=1 Tax=Hydra magnipapillata RepID=UPI000192615D Length = 745 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 133/409 (32%), Positives = 201/409 (49%), Gaps = 12/409 (2%) Query: 3 KTHLTEQKFSD-FALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTM 61 K F D F +P+++ ++ F +PIQ A P+ L+G D G AQTGTGKT+ Sbjct: 265 KIPNPVLTFDDAFYDYPEILSTIKSNNFTEPSPIQCQAWPVLLSGMDCIGIAQTGTGKTL 324 Query: 62 AFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGG 121 AFL F ++ P D++ P L+++PTRELA QI + + G++ YGG Sbjct: 325 AFLLPAFIHIDGQPIPRDKRG-GPSCLVLSPTRELAQQIEMEVKKF-HYRGIRSVCIYGG 382 Query: 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Q+ ++ GV+I+IGT GRL D ++ ++ +VLDEADRM D+GF +I+ Sbjct: 383 GDRSAQINLVRQGVEIIIGTPGRLNDLLMNGFFSVKSVTYLVLDEADRMLDMGFEPEIKK 442 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP-EQKTGHRIKEELFYPSN 240 + + P R ++ SAT V+ +A + + + I V + + H + + + + Sbjct: 443 ILLDIRPD--RQTIMTSATWPPGVQRMADKYLRDPIRINVGSLDLQACHSVSQLVEFIEQ 500 Query: 241 EEKMRLLQTLIEEEWPD-RAIIFANTKHRCEEIWGHLAADG--HRVGLLTGDVAQKKRLR 297 EK + I PD + IIF K ++I +LA G + + GD Q R + Sbjct: 501 HEKQDRVMDFISAMAPDGKLIIFVGRKVTADDISSNLAMKGTNIGIQCIHGDRDQSDREQ 560 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 L++ G +L+ATDVA+RGL I +THV NYD P EDYVHRIGRTGRAG SG ++ Sbjct: 561 ALEDMKTGAARVLIATDVASRGLDIKDLTHVLNYDFPRHIEDYVHRIGRTGRAGRSGCAL 620 Query: 358 SLACEEYA---LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPR 403 + E L I G +P + Sbjct: 621 TFVTREDWMHVAKLIPIMEEAGQEVPEELIEMAERWKKTQDRRDEEKSA 669 >UniRef50_Q28T45 DEAD/DEAH box helicase-like protein n=18 Tax=Alphaproteobacteria RepID=Q28T45_JANSC Length = 644 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 156/421 (37%), Positives = 222/421 (52%), Gaps = 15/421 (3%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 F+D L+PKV +A+ + G+ + TPIQA A+P LAGRDV G AQTGTGKT +F Sbjct: 9 PMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLP 68 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 L + PR+L++ PTRELA Q+ + + A+ L L GG + + Sbjct: 69 MITMLAR----GRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKE 124 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q + ++ GVD+LI T GRL+D+ ++ + L ++V+V+DEADRM D+GFI DI +F + Sbjct: 125 QEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLV 184 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFY-------PS 239 P R + FSAT++ + + ++N E IEVE + T I++ L Sbjct: 185 PFT--RQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRDAQ 242 Query: 240 NEEKMRLLQTLIEEEWP--DRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLR 297 + K +L+ I E AIIF N K + + L + GD+ Q R+R Sbjct: 243 AKMKRDMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHRMR 302 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 L F G + +LVA+DVAARGL IP V+HV NYD+P EDYVHRIGRTGRAG +G +I Sbjct: 303 TLAGFRDGSITLLVASDVAARGLDIPNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGVAI 362 Query: 358 SLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNR 417 +L L AIE I IP ++ DA + R R G + Sbjct: 363 TLCVPSDEKYLGAIEGLIKQPIPRAEAPMDAGTPKAETEDKPRRSRRGGRRSEEPKAEEK 422 Query: 418 R 418 + Sbjct: 423 Q 423 >UniRef50_A6TTG0 DEAD/DEAH box helicase domain protein n=28 Tax=Firmicutes RepID=A6TTG0_ALKMQ Length = 549 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 153/405 (37%), Positives = 225/405 (55%), Gaps = 10/405 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + KF+ + ++ L K TP+Q A+P LA RDV QAQTGTGKT+AF+ Sbjct: 2 KNKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPI 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + +ALI+ PTRELA+QI A+ + LAE G+ + AYGG ++Q Sbjct: 62 LERVNVEKP-------TIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 L+ L+ + I+IGT GRL+D+ ++ INLG + ++VLDEAD+M +GF++D+ + +P Sbjct: 115 LRKLKGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +R NM FSAT+ +VR LA + M + I+V+ ++ T I++ + ++ K LL Sbjct: 175 --KRRQNMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVTLDEIRQVVIETTDRGKQDLL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L +E P AIIF TK R + L G+ L GD+ Q KR +++ F + + Sbjct: 233 CQLFDEYNPFMAIIFCRTKRRAIALNEALINLGYNSDELHGDLTQAKREKVMKAFKKSKI 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 LVATDVAARGL I VTH+FNYD+P D E Y+HRIGRTGRAG +G +I+ Sbjct: 293 QYLVATDVAARGLDIEGVTHIFNYDIPQDGESYIHRIGRTGRAGETGMAITFMTSRDRDE 352 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTG 412 L IE I + V K + D + + G G ++ Sbjct: 353 LKIIEKVIKMDLDVQKSKSGKIDLD-EEEQDTKKSPKGRGNDKSK 396 >UniRef50_A3WBD4 DNA and RNA helicase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBD4_9SPHN Length = 497 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 162/445 (36%), Positives = 226/445 (50%), Gaps = 39/445 (8%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 L F+D L P++++A+E G+ T IQA A+P L +D+ G AQTGTGKT +F+ Sbjct: 33 LNRMTFADLGLSPELLKAVEDAGYTEPTAIQAEAIPAVLMMKDLIGIAQTGTGKTASFVL 92 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125 + + R+ PR+LI+ PTRELA Q+ + E LK+ L GG Sbjct: 93 PMIDVMAA----GRRRALMPRSLILEPTRELAAQVAENFEKYGANHDLKMALLIGGVQMG 148 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 QLK L+ GVD+LI T GRL+D ++ I L +++V+DEADRM D+GFI DI ++ + Sbjct: 149 DQLKTLDEGVDVLIATPGRLMDLFERGKILLNGCELLVIDEADRMLDMGFIPDIEFICDK 208 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P R MLFSAT+ + +LA + ++N + IE T I +K Sbjct: 209 LPET--RQTMLFSATMPAPIEKLAKKFLSNPKRIETTRAATTNKDITAFKVPVKARQKRD 266 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ L+ + + AIIFAN K E+ HL G G + GD+ Q RL+ LD F G Sbjct: 267 TLEWLLANDQVETAIIFANRKTTVRELNKHLQRQGFASGEIHGDMDQSSRLKELDRFKSG 326 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 D++ILVA+DVAARGL I V+HVFN+D P +DYVHRIGRTGRAGA G + +L +E A Sbjct: 327 DVNILVASDVAARGLDIKGVSHVFNFDTPWHPDDYVHRIGRTGRAGAKGRAFTLVADEDA 386 Query: 366 LNLPAIETYIGHSIPV------------------------SKYNPDALM---------TD 392 + +E G I V P + Sbjct: 387 EAIANVEKLTGAKIKVFGKEDVRVELADGSAKNTGSDDEAKDEKPAEKKSRSRSRKRDDE 446 Query: 393 LPKPLRLTRPRTGNGPRRTGAPRNR 417 P + R + P R PR R Sbjct: 447 GDAPRKPRRESAEDKPARKSRPRRR 471 >UniRef50_Q8D2Y1 DeaD protein n=2 Tax=Enterobacteriaceae RepID=Q8D2Y1_WIGBR Length = 583 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 137/401 (34%), Positives = 202/401 (50%), Gaps = 10/401 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 + E FS+ L ++ AL G+ +PIQ +P L G DV G AQTG+GKT AF Sbjct: 1 MNKKELSFSELGLKDFILLALNDLGYKKPSPIQEKCIPFLLKGYDVLGIAQTGSGKTAAF 60 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGD 122 + + D K+ P+ +I+ PTRELA+QI L++ + + YGG Sbjct: 61 FLPLLNNI-------DLKLKLPQIIILTPTRELALQIKFACCSLSKYIKEINIIALYGGQ 113 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y Q+K L+ I++GT GR++D + ++NL I VLDEAD M +GFI+D+ + Sbjct: 114 NYSIQIKSLKRNPQIVVGTPGRILDLLNKKYLNLSEITSFVLDEADEMLRMGFIEDVENI 173 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE 242 F + + Q +LFSAT+ + + M + I ++ + T IK+ + Sbjct: 174 F--LKSSKQHQTILFSATMPAAIHRITKRFMKKPKEIRIKASENTRPNIKQNYWIVYGLC 231 Query: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEF 302 K+ L +E E D IIF TK+ E+ L +G+ L GD+ Q R + L+ F Sbjct: 232 KIEALLRFLEVEIFDAVIIFVRTKNATLEVSDVLEKNGYNSSSLNGDMNQILREKTLNRF 291 Query: 303 TRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACE 362 G LDILVATDVAARGL + ++ V NYD+P D E Y+HRIGRTGRAG +G ++ Sbjct: 292 KTGLLDILVATDVAARGLDVDRISLVINYDIPLDVESYIHRIGRTGRAGRTGKALMFVEN 351 Query: 363 EYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPR 403 L IE I + K L+ + + Sbjct: 352 RERKILYNIERNIKEKLSQIKLPSVELLCKKRLNNFSEKIK 392 >UniRef50_UPI00019259AA PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 n=2 Tax=Hydra magnipapillata RepID=UPI00019259AA Length = 790 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 133/421 (31%), Positives = 209/421 (49%), Gaps = 6/421 (1%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F F ++ + + TPIQ+ A+P+ L+GRD+ G A+TG+GKT A Sbjct: 270 DPARPAISFGHFGFDDHLMGVIRSSNYSKPTPIQSQAVPVALSGRDIIGIARTGSGKTAA 329 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F+ ++++ P + ++ + P ALI APTREL QI+++ + + L++ YGG Sbjct: 330 FVWPMLVHIMAQPVL--KEGDGPIALICAPTRELCQQINSECKRFGKCYNLRVIACYGGG 387 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 +Q K L+ G +I++ T GRLID K NL + +V DEADRM+D+GF +R + Sbjct: 388 SKWEQTKGLQQGAEIVVCTPGRLIDLIKAKATNLLRVTYLVFDEADRMFDMGFEPQVRSI 447 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYP-SNE 241 + P R +LFSAT+ +V L + +++ I V + I + + S + Sbjct: 448 ANNVRPD--RQCLLFSATMKKKVEWLCRDILSDPIRIVVGELGEANEDIVQAVEVMKSPQ 505 Query: 242 EKMR-LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 +K LL ++E +IF K EE+ +L G+ +GL+ GD Q +R +L Sbjct: 506 QKWNWLLSHIVEFTSGGSVLIFVTKKSNSEEVAANLKEQGYELGLIHGDFDQFERNNVLK 565 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F + ILVATDVAARGL IP++ V NYD+ D + HRIGRTGRAG G + +L Sbjct: 566 QFKQKQFLILVATDVAARGLDIPSIKTVINYDVARDITTHTHRIGRTGRAGEKGIAYTLI 625 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 + + + + L P + R + PR+R Sbjct: 626 TPQDTHFAADLVRNLEGANQRVPDELLDLALKNPWFRKTRAKRGRKAANKEFTPRDRPGL 685 Query: 421 G 421 G Sbjct: 686 G 686 >UniRef50_C0EAN9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAN9_9CLOT Length = 563 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 134/402 (33%), Positives = 218/402 (54%), Gaps = 9/402 (2%) Query: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 + F+ L + +A+E GF N T IQA ++PL AG DV G++QTGTGKT+AF Sbjct: 1 MNSIPFAQLNLSDETGQAIEAMGFDNATDIQAQSIPLIRAGYDVIGRSQTGTGKTVAFGV 60 Query: 66 STFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGY 124 + + + N+ + LI+ PTRELAVQ ++ E +A+ G++ YGG Sbjct: 61 PAVELIDT-----EELRNKTQVLILCPTRELAVQACSEIEKIAKYKRGVRAVDIYGGAPM 115 Query: 125 DKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFR 184 D+Q+ L+ G +I++GT GR++D+ ++ + L +++++LDEAD M ++GF +D+ + + Sbjct: 116 DRQIMRLKRGANIVVGTPGRVMDHLRRRTLKLDHLKMIILDEADEMLNMGFREDVETILK 175 Query: 185 RMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKM 244 + P ++R +LFSAT+ + L + + + IE+ +Q T I+++ + KM Sbjct: 176 QTP--DERQTILFSATMPPAILALTKQYQKDPQLIEINRKQVTLDNIEQQFYEVPMGRKM 233 Query: 245 RLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTR 304 L +++ P +IIF NTK +E+ L G+ L GD+ Q +R +++D F R Sbjct: 234 DALGIILQYHDPALSIIFCNTKRMVDEVTAFLDRSGYSAEGLHGDMKQSQRTKVMDSFKR 293 Query: 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC-EE 363 G ILVATDVAARG+ + V +V NYD+P + E YVHRIGRTGRAG G ++++ Sbjct: 294 GRTKILVATDVAARGIDVNNVDYVINYDVPQNQEYYVHRIGRTGRAGKEGKAVTICSGRR 353 Query: 364 YALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 L I +I + + R Sbjct: 354 QVDELYHIVRMTKSTIKRESLPSGQDIERRSNEGVVARMEQK 395 >UniRef50_A6RW79 Pre-mRNA-processing ATP-dependent RNA helicase prp5 n=2 Tax=Fungi/Metazoa group RepID=PRP5_BOTFB Length = 1151 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 134/420 (31%), Positives = 207/420 (49%), Gaps = 11/420 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 QK+S L K ++ + K G+ T IQ A+P ++GRDV G A+TG+GKT+A Sbjct: 548 DVPKPVQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIA 607 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 FL F ++ + + + P LIM PTRELA QIH + +P +A GL+ AYGG Sbjct: 608 FLLPMFRHIRDQRPL--KGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGA 665 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYA---KQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 Q+ L+ G +I++ T GR+I+ NL + VVLDEADRM+D+GF + Sbjct: 666 IIKDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQV 725 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 +F + P R +LFSAT+ + LA + + + I V I + + Sbjct: 726 MKVFNNIRPN--RQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVRE 783 Query: 240 NEEKMRLLQTLIEE----EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKR 295 +EK L L+ E + R +IF + + + +++ L G+ + G Q R Sbjct: 784 EKEKFHRLLELLGELYNTDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDR 843 Query: 296 LRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGH 355 +D+F G + I++AT VAARGL + + V N+D P+ EDYVHR GRTGRAG +G Sbjct: 844 DSTIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGT 903 Query: 356 SISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPR 415 +++ EE I + S + + ++ + +G R G R Sbjct: 904 AVTFITEEQEQYSVGIAKALEQSGQEVPDRLNEMRKSYKDKVKSGAKKESSGFRGKGLER 963 >UniRef50_C5KE40 ATP-dependent RNA helicase ded-1, putative n=6 Tax=Perkinsus marinus ATCC 50983 RepID=C5KE40_9ALVE Length = 695 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 142/389 (36%), Positives = 209/389 (53%), Gaps = 15/389 (3%) Query: 7 TEQKFSDFA-LHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65 ++F+D + +VE +++ GF TP+Q ++P RD+ AQTG+GKT A+L Sbjct: 204 PLEQFNDGGEVAAAIVENIKRCGFDRPTPVQKYSIPTLTTRRDLMSCAQTGSGKTGAYLI 263 Query: 66 STFHYLLSHPAIA-------DRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLA 118 H +L+ R+ P LI++PTRELA QIH +A TG++ + Sbjct: 264 PAIHNMLADGPPDATSSGDYGRRKAYPITLILSPTRELASQIHEEARKFCFNTGIRPVVV 323 Query: 119 YGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKD 178 YGG QL+ LE G DIL+ T GRL D ++ ++L I++++ DEADRM D+GF Sbjct: 324 YGGADVRTQLRELERGCDILVATPGRLSDLMERFRVSLCQIKMLIFDEADRMLDMGFEPQ 383 Query: 179 IRWLFRR--MPPANQ-RLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEEL 235 IR + + MP + R + +FSAT +++LA + + + Y+ V T IK+ + Sbjct: 384 IRRIVEQEDMPSSRDGRQSAMFSATFPREIQQLARDFLKDYIYLTVGRVGSTHGSIKQIM 443 Query: 236 FYPSNEEKMRLLQTLIEEE-WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKK 294 Y K+R L ++EE+ ++F TK + +EI L D + + GD +Q + Sbjct: 444 RYVDENSKLRDLYRVLEEQTEEGLTLVFVETKRKADEIENMLRRDRYPATSIHGDRSQWE 503 Query: 295 RLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG 354 R L F G+L ILVATDVAARGL I V V NYDLP++ +DYVHRIGRTGRAG G Sbjct: 504 REEALKAFKSGELPILVATDVAARGLDISHVNLVINYDLPNNIDDYVHRIGRTGRAGNLG 563 Query: 355 HSISLACEEYALNLPA---IETYIGHSIP 380 +I+ E L + IP Sbjct: 564 TAIAFVNEGSKPILRDLWTLLEENKQEIP 592 >UniRef50_A0LLL9 DEAD/DEAH box helicase domain protein n=2 Tax=Deltaproteobacteria RepID=A0LLL9_SYNFM Length = 533 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 178/422 (42%), Positives = 249/422 (59%), Gaps = 5/422 (1%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + +F D L ++ + F CTPIQA LP TL G D AG+AQTGTGKT Sbjct: 110 DPEEGKTRFHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLDAAGRAQTGTGKTAV 169 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F+ + L +PA R+ PRAL++APTRELA+QI + L+ T K +GG Sbjct: 170 FIITMLTQFLRNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPFKSVAIFGGM 229 Query: 123 GYDKQLKVLESGV-DILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Y+KQ + L V DI++ T GRL+D+ +Q ++L ++++V+DEADRM D+GFI D++ Sbjct: 230 DYEKQKRRLTGEVIDIVVATPGRLLDFKRQGDLHLSKVEILVIDEADRMLDMGFIPDVQR 289 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + PP QR MLFSATL+ V A + N +E+EPEQ + + + + + Sbjct: 290 IIHYTPPKAQRQTMLFSATLTAEVTRFASQWTRNPVTVEIEPEQVAVDTVNQRVLITTID 349 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 EK LL +I + DR I+F N + + + L + G LL+G+V QKKR++ L+E Sbjct: 350 EKFTLLFNMITRQNLDRVIVFTNRRDQARRLTERLGSYGISCALLSGEVDQKKRVKTLEE 409 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 F G + +LVATDVAARGLH+ AV+HVFNY++P D EDYVHRIGRTGRAG SG S+S A Sbjct: 410 FRNGKIRVLVATDVAARGLHVEAVSHVFNYNMPMDPEDYVHRIGRTGRAGTSGISVSFAS 469 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPD---ALMTDLPKPLRLTRPRTGNGPRRTGAPRNRR 418 E+ + +PA+E Y+GH I + D L P+ RPR +GP R PR+ Sbjct: 470 EDDSFLIPALEKYLGHEIHCEHPDEDMLETLPEPTHTPVAAERPRR-SGPYRGRNPRSTG 528 Query: 419 RS 420 R Sbjct: 529 RR 530 >UniRef50_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUU6_9BACT Length = 472 Score = 546 bits (1408), Expect = e-154, Method: Composition-based stats. Identities = 155/412 (37%), Positives = 214/412 (51%), Gaps = 10/412 (2%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L+P ++ AL + TPIQ +P + GRDV G AQTG+GKT FL + Sbjct: 1 MSFETLGLNPDLLRALSDLKHESPTPIQKQTIPPIIEGRDVLGVAQTGSGKTGGFLLPSL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H + A +R + + L+++PTRELA QI A + + L GG +Q+ Sbjct: 61 HR--NKRAQGNRTRH--QILVLSPTRELAGQIERSAREYGKYLRSRTVLLVGGTDMRRQI 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L D++I T GRLID+ ++ INL + VVLDEADRM D+GF+ D+ + + + P Sbjct: 117 DFLRRPWDLVIATPGRLIDHMQRGTINLSHVHTVVLDEADRMLDMGFLPDVETILKALHP 176 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLL 247 +R +LF+ATL R++ L + I +E I +E+ S+ +K LL Sbjct: 177 --ERQTLLFTATLPARIQMLTKTYQKDPVLIRLETASAPPVSIDQEVVAISHGAQKWGLL 234 Query: 248 QTLIEEEW--PDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 +T++ E + +IF TK E++ L A+G L GD +Q +R R+L +F G Sbjct: 235 KTILTEPQTTEGQTLIFTRTKRGAEDLANQLLAEGFPSDALHGDKSQSQRNRVLSKFRAG 294 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 ILVATDVAARGL I VT V NYDLP EDYVHRIGRTGRAG SG +IS Sbjct: 295 QTRILVATDVAARGLDIDTVTCVINYDLPQSPEDYVHRIGRTGRAGRSGRAISFCHPADR 354 Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNR 417 L IE +G S +P R + PR+ GPR G R Sbjct: 355 NLLRDIERLLGSS-VPVSPLSPPPQPKGDRPFRSSGPRSSGGPRPGGFRGER 405 >UniRef50_Q0B215 DEAD/DEAH box helicase domain protein n=8 Tax=Proteobacteria RepID=Q0B215_BURCM Length = 511 Score = 546 bits (1408), Expect = e-154, Method: Composition-based stats. Identities = 146/395 (36%), Positives = 208/395 (52%), Gaps = 4/395 (1%) Query: 7 TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66 T F+ L ++ L+ + TP+Q A+P L G+DV AQTGTGKT F Sbjct: 33 TSMSFASLGLIDPLLRNLQDLNYQTPTPVQVKAIPAVLGGKDVMAGAQTGTGKTAGFALP 92 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDK 126 L+ N+ R L++ PTRELA Q+ + L+ AYGG + Sbjct: 93 LLQRLVQQGPAV--SSNRARVLVLVPTRELAEQVLQSFVAYGKGLDLRFLAAYGGVSINP 150 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q+ L GVD+L+ T GRL+D +QN + ++ +VLDEADRM DLGF +++ +F + Sbjct: 151 QMMKLRKGVDVLVATPGRLLDLNRQNAVQFDQVETLVLDEADRMLDLGFARELNAVFAAL 210 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P QR +LFSAT + +R +A + + I V P TG +IK+ + K L Sbjct: 211 PV--QRQTLLFSATFTDDIRTMAASILRSPVNISVSPPNVTGSKIKQWVVTVDKRNKPDL 268 Query: 247 LQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGD 306 L+ E D A++F T++ E + L G+ V + GD Q RLR L+ F G+ Sbjct: 269 FMHLVAENNWDHALVFVKTRNGVEYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKTGE 328 Query: 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 + +LVATDVAARGL I + V N DLP +DYVHRIGRTGRAGASG ++SL C + A Sbjct: 329 VQMLVATDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAP 388 Query: 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 L AIE IG ++ + +P+ + Sbjct: 389 QLAAIEALIGQTLRREEEPGFEAEHRVPETSSTGQ 423 >UniRef50_D1H3Q8 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=14 Tax=Viridiplantae RepID=D1H3Q8_VITVI Length = 568 Score = 546 bits (1408), Expect = e-154, Method: Composition-based stats. Identities = 137/378 (36%), Positives = 203/378 (53%), Gaps = 14/378 (3%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F+D LH +++ + + T IQA A+P+ L+GRD+ G A+TG+GKT AF Sbjct: 122 IESFTDMGLHQSIMKDITFHEYTRPTFIQAQAMPVALSGRDLLGCAETGSGKTAAFAIPM 181 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDK 126 + L+ P + R+ + P AL++APTRELA QI + + + + + + GG + Sbjct: 182 IQHCLAQPPV--RRGDGPLALVLAPTRELAQQIEKEVKAFSRSLDSFRTAIVVGGTNISE 239 Query: 127 QLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM 186 Q L +GV+I++ T GR I + ++ + +L I VVLDEADRM D+GF IR + + + Sbjct: 240 QRSELRAGVNIVVATPGRFIHHLQEGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNL 299 Query: 187 PPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRL 246 P + +LFSAT+ + LA E +NN ++V + + L S EK+ Sbjct: 300 P--QKHQTLLFSATMPMEIETLAQEYLNNPVQVKVGKVSCPTANVSQILEKVSESEKIDG 357 Query: 247 LQTLIEEE---------WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLR 297 L L+ EE I+F K RC+E+ L A G R L G +Q +R Sbjct: 358 LLALLVEEASQAERCGRPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQAEREA 417 Query: 298 ILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSI 357 L +F G +ILVATDVA+RGL + V HV N DLP E+YVHRIGRTGRAG++G + Sbjct: 418 ALRDFRNGATNILVATDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQAT 477 Query: 358 SLACEEYALNLPAIETYI 375 S + + I I Sbjct: 478 SFYTDRDVFLVAHIRKAI 495 >UniRef50_A6KZW9 ATP-dependent RNA helicase n=51 Tax=Bacteria RepID=A6KZW9_BACV8 Length = 624 Score = 545 bits (1407), Expect = e-154, Method: Composition-based stats. Identities = 129/385 (33%), Positives = 206/385 (53%), Gaps = 11/385 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTL-AGRDVAGQAQTGTGKTMAFLTS 66 + F + + P++++A+++ G+ N P+Q +P L G DV AQTGTGKT AF Sbjct: 1 MKTFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLP 60 Query: 67 TFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYD 125 + D K P+ALI+ PTREL +QI D ++ GLK+ YGG + Sbjct: 61 LIQKV-------DVKHRAPQALILCPTRELCLQIAGDLNDYSKYIDGLKILPVYGGSSIE 113 Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Q+++L++GV I++ T GRLID ++ L I VV+DEAD M ++GF I + + Sbjct: 114 SQIRMLKTGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLNMGFTDSINAILEK 173 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 +P R ++FSAT+S + +A + +++A+ I + + + + + ++K Sbjct: 174 VPED--RNTLMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYA 231 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L+ + + IIF T+ +EI L DG+ L G+++Q +R ++ +F + Sbjct: 232 ALKRIADYYPQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQR 291 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365 L +LVATDVAARGL + +THV NY LPDD E Y HR GRTGRAG +G SI++ Sbjct: 292 HLQLLVATDVAARGLDVNDLTHVINYGLPDDIESYTHRSGRTGRAGKTGISIAIINLREK 351 Query: 366 LNLPAIETYIGHSIPVSKYNPDALM 390 + IE I + + + Sbjct: 352 GKMREIERIINKKFIMGEMPSGKQI 376 >UniRef50_B1ZWV2 DEAD/DEAH box helicase domain protein n=9 Tax=Verrucomicrobia RepID=B1ZWV2_OPITP Length = 409 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 149/417 (35%), Positives = 218/417 (52%), Gaps = 13/417 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 F L V+ + G+ + TPIQ A+P+ L G D+ G AQTGTGKT AF Sbjct: 1 MPFKALQLSAPVLRGVVAAGYTDPTPIQLRAIPVVLGGGDLIGSAQTGTGKTAAFALPIL 60 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 L +H A PR L++ PTRELA Q+ A T L+ +GG GY Q Sbjct: 61 TRLGAHAA------RAPRVLVLEPTRELAAQVETAFRDFARFTDLRTVAVFGGVGYGLQR 114 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 L+ GVD+++ T GRL+DY INL ++++VLDE DRM D+GF+ ++ + +R P Sbjct: 115 TELKRGVDVIVATPGRLMDYLHDRTINLQGVEILVLDEVDRMLDMGFLPVVKDIIQRCP- 173 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 QR + FSAT+ ++ +A + N +EV + +K L+ + ++K LL+ Sbjct: 174 -RQRQTLFFSATVPPEIQAVASFALRNPTRVEVGVNRSVNESVKHALYPVAADQKFELLE 232 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L+ D ++F+ TKH ++I L A H V +L + +Q +R+ L F G + Sbjct: 233 ALLARTDFDSVLVFSRTKHGADKIARKLKAANHSVAVLHANRSQNQRIEALAGFKSGKYE 292 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 I+VATD+AARG+ + V+HV NYD+P+ EDYVHRIGRTGRA A G + +L E A ++ Sbjct: 293 IMVATDIAARGIDVAGVSHVINYDVPEKPEDYVHRIGRTGRAQAVGDAFTLVTPENAHDV 352 Query: 369 PAIETYIGHSIPVSKY-----NPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420 IE +IG IP + P +P R G + R R R Sbjct: 353 RDIERFIGQKIPELRLAGFSYRPFVARPPQVQPPRPPGSLPGQIRHKGSFNRYRGRR 409 >UniRef50_C1AE59 ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE59_GEMAT Length = 498 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 139/405 (34%), Positives = 208/405 (51%), Gaps = 13/405 (3%) Query: 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTF 68 FS LHP + + L++ GF TPIQ A+P L GRDV A TG+GKT AFL Sbjct: 3 MTFSSLQLHPSLQQGLKELGFARPTPIQGEAIPPALEGRDVLACAMTGSGKTYAFLLPIL 62 Query: 69 HYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQL 128 H L+S P RAL++ PTRELA QI + + T L +GG G Q Sbjct: 63 HQLMSKPR------GNTRALVLTPTRELAAQILESLQDVTTHTPLTGAAVFGGVGMGPQE 116 Query: 129 KVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188 SGVD+++ T GRL+D+ +Q + L ++ +VLDEADRM D+GF+ +I+ + R +P Sbjct: 117 HAFRSGVDVIVATPGRLLDHFRQPYAKLDQLEYLVLDEADRMLDMGFLPEIKKILRHLP- 175 Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248 +R + FSAT+ + L E +N + ++ + I + ++ S E K LL Sbjct: 176 NRKRQTLFFSATMPPPIAALTQEMLNKPVTLNLQRQAAPAKGITQAVYPVSQELKSALLV 235 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 L++ +A++F TKHR + L G + + G+ +Q +R + L F G Sbjct: 236 ALLKRGDMPQALVFTRTKHRANRLASQLVTAGIKAERIHGNRSQSQRTQALAGFKDGSYQ 295 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +LVATD+AARG+ + A+ HV N+D+P EDY+HR+GRT RA A+G + + E L Sbjct: 296 VLVATDIAARGIDVEALGHVVNFDVPVAAEDYIHRVGRTARAEATGEAFTFVSPEEEGEL 355 Query: 369 PAIETYIGHSIPVSKYNPDALMT------DLPKPLRLTRPRTGNG 407 IE I ++P ++P R+ R Sbjct: 356 KLIERAIKRALPRVTVPDFDYHAKPTQKLEVPIAERIAEIRKKKA 400 >UniRef50_Q10MH8 DEAD-box ATP-dependent RNA helicase 24 n=10 Tax=Eukaryota RepID=RH24_ORYSJ Length = 770 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 143/405 (35%), Positives = 213/405 (52%), Gaps = 10/405 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + F+D +++ A+ K+G+ T IQ ALP+ L+GRD+ G A+TG+GKT A Sbjct: 213 DVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAA 272 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F+ +++ P + K P ++ APTRELA QI+ +A+ A+ L++ YGG Sbjct: 273 FVLPMIVHIMDQPEL--EKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGV 330 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q K L++G +I+I T GRLID K + + +VLDEADRM+DLGF IR + Sbjct: 331 SKFDQFKELKAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSI 390 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEEL-FYPSNE 241 ++ P R +LFSAT+ Y+V LA E + + + V IK+ + PS+ Sbjct: 391 VGQIRPD--RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDA 448 Query: 242 EKMR-LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 EKM LL+ L ++FA K R +EI L G R+ L GD Q R+ L Sbjct: 449 EKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQ 508 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAG-ASGHSISL 359 +F G +LVATDVAARGL I ++ V N+D+ + + ++HRIGRTGRAG G + +L Sbjct: 509 KFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTL 568 Query: 360 ACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRT 404 ++ + + I + P+ LM K R R Sbjct: 569 ITQKEVRFAGELVHCL---IAAGQDVPNELMDLAMKDGRFRANRD 610 >UniRef50_Q8YXJ0 ATP-dependent RNA helicase n=24 Tax=Cyanobacteria RepID=Q8YXJ0_ANASP Length = 513 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 144/402 (35%), Positives = 210/402 (52%), Gaps = 10/402 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + + + VE LEK GF T IQA A+P L+GRDV GQ+QTGTGKT AF Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 L D + +A+++ PTRELA+Q+H +GL+ YGG D+Q+ Sbjct: 64 RL-------DPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQML 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ GV I++GT GR+ID ++ ++ L ++ VLDEAD M +GFI D+ + + P Sbjct: 117 QLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQD 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLLQ 248 R LFSAT+ +R L + + + + VE + T ++I + + K R LQ Sbjct: 177 --RQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQVAYLIPRHWTKARALQ 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E E P+ A+IF T+ E+ L A GH V GD++Q+ R R+L F + Sbjct: 235 PILEMEDPETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERLLTRFRSRQVR 294 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 +VATD+AARGL + ++HV NYDLPD E YVHRIGRTGRAG G +I+L Sbjct: 295 WVVATDIAARGLDVDQLSHVINYDLPDSVETYVHRIGRTGRAGKEGTAITLVQPFERRKQ 354 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRR 410 E ++ + + A + + R R Sbjct: 355 QIFERHVRQNWQLLSIPTRAQIEARHILKLQEQVREALAGER 396 >UniRef50_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicase n=5 Tax=Proteobacteria RepID=Q4FSS4_PSYA2 Length = 567 Score = 544 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 147/390 (37%), Positives = 214/390 (54%), Gaps = 11/390 (2%) Query: 4 THLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 T + F+D + ++ ALE+ G+ + TPIQA A+P L GRD+ AQTG+GKT AF Sbjct: 39 TDENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAF 98 Query: 64 LTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGD 122 + L + +ALI+ PTRELA Q+H ++ GL GG Sbjct: 99 VIPVLDRLSRATSFD----KLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGA 154 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Y+ Q+ L+ GV +++ T GRL+D+ ++L +++++VLDEADRM D+GF DI + Sbjct: 155 PYNGQITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDI 214 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-E 241 R P R ++ SAT V ++A N E + ++ E I+E+++Y + + Sbjct: 215 LRAAPID--RQTIMCSATWDGPVGKIAASFTKNPERVSIKVESA---HIEEKVYYCDDFD 269 Query: 242 EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDE 301 K RLL ++ + ++ IIFA TK E++ L GH+ L GD+ Q KR RI+ + Sbjct: 270 HKNRLLDKIVCHKDMEQIIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIVQD 329 Query: 302 FTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLAC 361 G ILVATDVAARGL +PA++HV NYDLP EDYVHRIGR GRAG +G +ISL Sbjct: 330 LRNGKCKILVATDVAARGLDVPALSHVINYDLPRQTEDYVHRIGRCGRAGRTGVAISLCS 389 Query: 362 EEYALNLPAIETYIGHSIPVSKYNPDALMT 391 + L AI Y+ + S Sbjct: 390 MDDRPQLNAINRYLDRKMEASVIEGMEPKK 419 >UniRef50_UPI0001C33831 DNA/RNA helicase, superfamily II n=3 Tax=Cyanobacteria RepID=UPI0001C33831 Length = 477 Score = 544 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 138/386 (35%), Positives = 207/386 (53%), Gaps = 10/386 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F + L V L++ GF N T IQ A+PL L G DV GQ+QTGTGKT A+ Sbjct: 4 SFENLGLSETRVNKLKELGFENPTEIQEKAIPLMLEGHDVLGQSQTGTGKTAAYSLPILE 63 Query: 70 YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129 + + LI+ PTRELA Q+ + L + YGG D+Q++ Sbjct: 64 KVDIQDP-------SVQVLILTPTRELAQQVAEALKDFTVRRRLYILTVYGGQSIDRQIR 116 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE GV I++GT GR+ID ++ + L +++ VLDEAD M +GFI D++ + ++ P + Sbjct: 117 SLERGVQIVVGTPGRVIDLIERKKLILDSLRWAVLDEADEMLSMGFIDDVKTILKKTPES 176 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE-EKMRLLQ 248 R FSAT+ +REL + + + I VE Q RI++ ++ K + LQ Sbjct: 177 --RSTACFSATMPREIRELVNQFLKSPVTISVERTQAAPTRIEQNIYMVPRGWSKRKALQ 234 Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308 ++E E P+ AIIF TK ++ L GH V G+++Q +R R++ F G + Sbjct: 235 PVLEIEDPESAIIFVRTKQTASDLTTRLQEIGHCVDEYHGNLSQSQRERLVHRFRDGRIK 294 Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368 ++VATD+AARGL + ++HV NYDLPD+ E Y+HRIGRTGRAG +G +IS+ + Sbjct: 295 LVVATDIAARGLDVEGLSHVINYDLPDNSETYIHRIGRTGRAGKTGKAISIVESADRRMI 354 Query: 369 PAIETYIGHSIPVSKYNPDALMTDLP 394 IE + I + K + + Sbjct: 355 RQIERKLRQKIDICKIPNRSEVEAKR 380 >UniRef50_C0AEG7 DEAD/DEAH box helicase domain protein (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEG7_9BACT Length = 606 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 133/400 (33%), Positives = 220/400 (55%), Gaps = 10/400 (2%) Query: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYL 71 ++ L P++++A++K GF +PIQA +PL LAG DV GQ+ TG+GKT AF + Sbjct: 1 AELGLSPELLKAVDKMGFEEASPIQAAVIPLLLAGSDVVGQSSTGSGKTAAFALPAIERV 60 Query: 72 LSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEAT-GLKLGLAYGGDGYDKQLKV 130 D K+ + LI+ PTRELAVQ+ + LA G+ YGG Y++Q + Sbjct: 61 -------DTKLKAVQVLILCPTRELAVQVAEEVNKLASFKRGVMEVPIYGGQSYERQFRA 113 Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190 L +G ++IGT GR++D+ ++ + L + +V+LDE DRM D+GF DI + + +P Sbjct: 114 LAAGAQVVIGTPGRVMDHMERGTLKLDKLSMVILDECDRMLDMGFRDDIEHILKSVPE-- 171 Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250 QR ++ FSAT+ +R++ + N ++++E + ++ ++ + F K+ +L L Sbjct: 172 QRQSLFFSATMPREIRDMISRFIPNPAWVKIETQMQSAPQVDQVYFEVDRRSKLEVLTRL 231 Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310 I+ IIF +TK +E+ +L A G+ L GD+ Q +R R +++F R + L Sbjct: 232 IDLNDFRYGIIFCSTKIMVDELDENLHARGYACDRLHGDITQAQRTRTMEKFKRRGFEFL 291 Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370 +ATDVAARGL + + VFN+DLP+D EDY HRIGRTGRAG G + + L + Sbjct: 292 IATDVAARGLDVDDLEVVFNFDLPNDAEDYTHRIGRTGRAGRKGKAFTFVSGRELWKLQS 351 Query: 371 IETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRR 410 + + I + + + + + + R ++ Sbjct: 352 MVRFARLDIRRERVPSLDQVEEARENVFFEKLRATLDAKK 391 >UniRef50_UPI000186EE69 DEAD box ATP-dependent RNA helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EE69 Length = 610 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 128/401 (31%), Positives = 204/401 (50%), Gaps = 12/401 (2%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 F + L V+ + K + TPIQ+ P+ L+G+++ G A+TG+GKT+ Sbjct: 195 NCPAPIFSFEETGLADDVINIVRKLNYFAPTPIQSQGWPIALSGQNMVGIARTGSGKTLG 254 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F+ ++ P + + + P AL++APTREL Q A P A A+G++ YGG Sbjct: 255 FVLPAVIHIQHQPKL--ERGDGPIALVLAPTRELVQQTQNVAIPFARASGIRSVAVYGGS 312 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Q + L +G +I + T GRL+D+ NL +VLDEADRM+D+GF IR + Sbjct: 313 DKYGQDRHLRNGTEICVATPGRLLDFLNSGTTNLERCTYLVLDEADRMFDMGFEPQIRSI 372 Query: 183 FRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKT-GHRIKEELFYPSNE 241 ++ P R +++SAT ++ LA E + + + V ++ T I + + +E Sbjct: 373 IDQIRPD--RQVLMWSATWPKEIKRLAEEYLKDYIQLNVGSQELTANPNINQIVHVCQSE 430 Query: 242 EKMRLLQTLIEEEWPD---RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 + LQ +++E + +IF TK + + I L G+R L G QK R I Sbjct: 431 RDKKKLQNVLKEIGEQDEIKTLIFTATKQKSDSIAFWLQDLGYRCDSLHGGKTQKNRDFI 490 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 L G + ILVATDVAARGL + + +V NYD P++ EDY+HRIGRTGR A+G S + Sbjct: 491 LR----GRIKILVATDVAARGLDVSDIRYVINYDYPNNMEDYIHRIGRTGRHNATGTSYT 546 Query: 359 LACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 +E A + + + + + + L +P + Sbjct: 547 FLTDEDASKAGDLISVLREANQNVDPDLENLAMSAARPKKG 587 >UniRef50_Q8H0U8 DEAD-box ATP-dependent RNA helicase 42 n=11 Tax=Viridiplantae RepID=RH42_ARATH Length = 1166 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 118/402 (29%), Positives = 199/402 (49%), Gaps = 8/402 (1%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 + + L K+++ ++K + PIQ ALP+ ++GRD G A+TG+GKT+ Sbjct: 523 DVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLG 582 Query: 63 FLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGD 122 F+ ++ P + + P L+MAPTREL QIH+D ++ G++ YGG Sbjct: 583 FVLPMLRHIKDQPPV--EAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGS 640 Query: 123 GYDKQLKVLESGVDILIGTTGRLIDYA---KQNHINLGAIQVVVLDEADRMYDLGFIKDI 179 G +Q+ L+ G +I++ T GR+ID NL + +V+DEADRM+D+GF I Sbjct: 641 GVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQI 700 Query: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPS 239 + + + P +R +LFSAT +V LA + +N I+V I + + Sbjct: 701 TRIIQNIRP--ERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP 758 Query: 240 NEEKMRLLQTLI-EEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 ++ L L+ E + ++F ++ +C+ ++ + + L G Q R Sbjct: 759 ESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDREST 818 Query: 299 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 + +F ++L+AT VAARGL + + V N+D P+ EDYVHR+GRTGRAG G +++ Sbjct: 819 ISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVT 878 Query: 359 LACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT 400 E+ A P + + S + AL ++ Sbjct: 879 FISEDDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQG 920 >UniRef50_A9NFC3 DEAD box ATP-dependent RNA helicase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFC3_ACHLI Length = 547 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 141/396 (35%), Positives = 198/396 (50%), Gaps = 10/396 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F+D + ALEK GF TPIQ A+P + G D+ GQAQTGTGKT AF Sbjct: 5 FNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIPMVEK 64 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATG-LKLGLAYGGDGYDKQLK 129 D + Q + LI+ PTREL Q++ + L + L++ GG+ Y+KQ K Sbjct: 65 -------TDTSLRQTQGLILTPTRELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFK 117 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 L+ I++ T GR+ID+ + ++L I + LDEAD M +GF DI + + P Sbjct: 118 ELDRKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLKMGFQDDIERILQTTPET 177 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 R +LFSAT+ ++++A N E I++E + T RI + F +EK LL+ Sbjct: 178 --RQTVLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLER 235 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 L++ E P AIIF NTK + I L G L GD+ Q +R +++ F L I Sbjct: 236 LLDFENPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSI 295 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL + V + NYDLP E YVHRIGRTGRAG G + + L Sbjct: 296 LVATDVAARGLDVDDVEIIVNYDLPQQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLD 355 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTG 405 + Y I + + + +T Sbjct: 356 MLAHYTKADIKRLEVPTADDVYKEQLKTFKHKIKTE 391 >UniRef50_Q8I0W7 Snrnp protein, putative n=32 Tax=Eukaryota RepID=Q8I0W7_PLAF7 Length = 1123 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 130/425 (30%), Positives = 206/425 (48%), Gaps = 24/425 (5%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 +K+ + L +++A++K + TPIQ A+P+ L RD+ G A+TG+GKT AF+ Sbjct: 694 PPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFV 753 Query: 65 TSTFHYLLSHPAIA-DRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDG 123 Y+ P + + + P AL++AP+RELA+QI+ + A + GG Sbjct: 754 LPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRN 813 Query: 124 YDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLF 183 + Q L GV+I+IGT GRL D ++ + L V+LDEADRM D+GF + ++ Sbjct: 814 AEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDMGFEDTVHYIL 873 Query: 184 RRMPPAN----------------------QRLNMLFSATLSYRVRELAFEQMNNAEYIEV 221 ++P +N RL +FSAT+ V L+ + + YI + Sbjct: 874 DKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPPSVERLSRKYLRAPAYISI 933 Query: 222 EPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGH 281 I+++L + + +K + LQ ++E P I+F N K + I + + Sbjct: 934 GDPGAGKRSIEQKLEFLTEGKKKQKLQEILEMYEPP-IIVFVNQKKVADIISKSITKMKY 992 Query: 282 RVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYV 341 + L G AQ+ R + L F + DILVATDVA RG+ + V V N+D+P D E Y Sbjct: 993 KAVALHGGKAQEIREQTLSAFKNAEFDILVATDVAGRGIDVHGVKLVINFDMPKDIESYT 1052 Query: 342 HRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 HRIGRTGRAG G +IS E + ++ ++ S + KP + + Sbjct: 1053 HRIGRTGRAGMKGLAISFITEHDSHLFYDLKQFLISSNNIVPLELANNPASKVKPGTVMQ 1112 Query: 402 PRTGN 406 N Sbjct: 1113 TPKKN 1117 >UniRef50_Q9BUQ8 Probable ATP-dependent RNA helicase DDX23 n=74 Tax=Eukaryota RepID=DDX23_HUMAN Length = 820 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 140/416 (33%), Positives = 207/416 (49%), Gaps = 27/416 (6%) Query: 3 KTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMA 62 K + + D +L P ++E ++K G+ TPIQ A+P+ L RD+ G A+TG+GKT A Sbjct: 385 KIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAA 444 Query: 63 FLTSTFHYLLSHPAIAD--RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG 120 FL ++ + P I P A+I+APTRELA QI + + G++ G Sbjct: 445 FLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIG 504 Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180 G + Q L G +I+I T GRLID + ++ L VVLDEADRM D+GF D++ Sbjct: 505 GISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQ 564 Query: 181 WLFRRMPPANQ------------------------RLNMLFSATLSYRVRELAFEQMNNA 216 + MP +NQ R ++F+AT+ V LA + Sbjct: 565 KILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRP 624 Query: 217 EYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHL 276 + + K R+++++F S EK + L ++E+ + IIF N K C+ + L Sbjct: 625 AVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSL 684 Query: 277 AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDD 336 G+ L G Q++R L G DILVATDVA RG+ I V+ V NYD+ + Sbjct: 685 EKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKN 744 Query: 337 CEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTD 392 EDY+HRIGRTGRAG SG +I+ +E + ++ I PVS P+ Sbjct: 745 IEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAI-LESPVSSCPPELANHP 799 >UniRef50_Q553B1 ATP-dependent RNA helicase ddx46 n=1 Tax=Dictyostelium discoideum RepID=DDX46_DICDI Length = 1151 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 126/401 (31%), Positives = 194/401 (48%), Gaps = 8/401 (1%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 Q ++ L KV L+K + T IQA +P + GRD+ G A+TG+GKT+AFL Sbjct: 505 PKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFL 564 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGY 124 F ++L+ P A ALIM+PTRELA+QIH + + ++ GL+ YGG Sbjct: 565 LPMFRHILAQPKSA--PGEGMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASI 622 Query: 125 DKQLKVLESGVDILIGTTGRLIDYA---KQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 +Q+ L+ G DI++ T GR+ID + NL + +VLDEADRM+D+GF I Sbjct: 623 SEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINC 682 Query: 182 LFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE 241 + + P R ++FSAT +V +A + +N I I++ + E Sbjct: 683 IVDSIRPD--RQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSSDIEQFVEVRPTE 740 Query: 242 EKMRLLQTLIE-EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD 300 + R L L+ + +IF N + + ++ L+ ++ L G Q R + Sbjct: 741 TRFRRLIELLSIWYHKGQILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETIS 800 Query: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360 +F IL+AT +A+RGL I + V N+D PD EDYVHR+GRTGRAG G + + Sbjct: 801 DFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFI 860 Query: 361 CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR 401 + +I + S L K + + Sbjct: 861 TPDEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGK 901 >UniRef50_B6K911 DEAD/DEAH box helicase, putative n=3 Tax=Toxoplasma gondii RepID=B6K911_TOXGO Length = 685 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 138/420 (32%), Positives = 202/420 (48%), Gaps = 29/420 (6%) Query: 5 HLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFL 64 F + + L K F T IQ + P L+GRD+ G AQTG+GKT+ FL Sbjct: 273 PRPVFSFEETGFPTAIQNQLRKMNFAEPTAIQKIGWPTALSGRDMIGIAQTGSGKTLGFL 332 Query: 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGL----------- 113 + + P +A + P L++APTRELA+QI + E L Sbjct: 333 LPGLVHAAAQPPLA--QGQGPIVLVLAPTRELAMQIRHECMRFTEGLSLASSEDPQRADT 390 Query: 114 --KLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMY 171 + YGG Q L +G +ILI T GRLID+ NL + +VLDEADRM Sbjct: 391 KFRTACVYGGVPRQGQATELRNGAEILIATPGRLIDFLDLGVTNLKRVSYIVLDEADRMM 450 Query: 172 DLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMN-NAEYIEVE-PEQKTGH 229 D+GF +R +F ++ P R +L+SAT VR LA E ++V + + Sbjct: 451 DMGFEPQVRKIFSQVRPD--RQTLLWSATWPKEVRGLASEFCRTRVVKLQVGKADLQANA 508 Query: 230 RIKEELFYPSNEEKMRLLQTLIEEE-WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTG 288 + + + S+ + L ++++EE + +IF TK +C+++ L R + G Sbjct: 509 NVTQRIEVVSSNQLQHRLLSVLQEEVTGQKTLIFCETKRQCDQLCRELRYRQLRALAIHG 568 Query: 289 DVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTG 348 D Q++R RIL +F +GD +IL+ATDVA+RGL I V V NYD+P + E Y+HRIGRTG Sbjct: 569 DKEQRERDRILHDFRKGDCEILLATDVASRGLDIQDVKFVINYDVPKNIESYIHRIGRTG 628 Query: 349 RAGASGHSISLA-----CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPR 403 RAG G +IS E I + P A + + P ++ R Sbjct: 629 RAGNKGTAISFFQYDFYSPEKVTMARKICEVMRS----VGQEPPADLEKIGAPRAPSKSR 684 >UniRef50_B0TQ71 DEAD/DEAH box helicase domain protein n=31 Tax=Gammaproteobacteria RepID=B0TQ71_SHEHH Length = 437 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 142/400 (35%), Positives = 218/400 (54%), Gaps = 6/400 (1%) Query: 24 LEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADR-KV 82 + +KG+ T IQA A+P LAGRD+ AQTGTGKT AF L+ + ++ K Sbjct: 40 VAQKGYQQPTAIQAEAIPAILAGRDIMASAQTGTGKTAAFTLPLLQRLIDKSSSDEQSKA 99 Query: 83 NQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTT 142 + L++APTRELAVQ++ + A T + + YGG D Q L +GVD+++ T Sbjct: 100 KRASVLVLAPTRELAVQVNTNVSQYAVNTDVSSIVIYGGVSIDAQATKLAAGVDVIVATP 159 Query: 143 GRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLS 202 GRL+D+ ++ +NL I+ +V DEADRM D+GF+ +I + +++P +R +LFSAT S Sbjct: 160 GRLLDHVRRGTLNLSDIEYLVFDEADRMLDMGFMDEINAILKQLPA--KRQTLLFSATFS 217 Query: 203 YRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIF 262 + EL+ + + IEV+ + I++ ++ +E K LL LI + + ++F Sbjct: 218 SAIFELSKKLLQKPLRIEVDKANSAANSIEQVVYAVDSERKTELLCHLINKSAWQQVLVF 277 Query: 263 ANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHI 322 + K + I + A G GD+ Q R ++L++F +G + LVATDVAARGL I Sbjct: 278 SRKKQTADLIAQKMLAAGIEAKAFHGDLGQGAREQVLNDFKQGKIKALVATDVAARGLDI 337 Query: 323 PAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVS 382 + V NY++P EDYVHRIGRTGRAG +G +I+L E+ AL L +E+ I +P Sbjct: 338 VELKVVVNYEIPFVAEDYVHRIGRTGRAGNTGKAITLYSEDDALLLEEVESVIDKRLPQQ 397 Query: 383 KYNPDALMTDLPKPLRLTRPR---TGNGPRRTGAPRNRRR 419 +P+ + +R RRR Sbjct: 398 WLEGFEPDLTKLEPVTRKNSKAAQRQRAKKRALGADKRRR 437 >UniRef50_C6CYC6 DEAD/DEAH box helicase domain protein n=89 Tax=Firmicutes RepID=C6CYC6_PAESJ Length = 578 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 145/402 (36%), Positives = 224/402 (55%), Gaps = 9/402 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 +F + P++ + L+ G + TP+Q A+P+ L+G+DV QAQTGTGKT+AF Sbjct: 2 STEFISMGIIPELTDVLQSNGITSPTPVQKKAIPVLLSGQDVIAQAQTGTGKTIAFTLPI 61 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + D Q +ALI+ PTRELA+QI ++ + LA A G K+ AYGG D Q Sbjct: 62 LQRI-------DIDKEQVQALILTPTRELAIQITSELKKLAAAVGAKVLAAYGGQDVDAQ 114 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 ++ L + I++ T GRLID+ ++ INLG ++++VLDEAD+M +GF+ +++ + + P Sbjct: 115 IRKLNNSPHIVVATPGRLIDHMRRETINLGKLKMLVLDEADQMLHMGFLPEVQNIVDQTP 174 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 R MLFSAT+ +++ LA M I+++ T IK+ + ++ + + L Sbjct: 175 --RARQTMLFSATMPDQIKRLAENYMKTPVDIKIQSANVTLDNIKQLVIETTDRGRQKAL 232 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 ++IE + P A+IF TK R +++ L G L GD+ Q KR +++ F L Sbjct: 233 ISMIETQRPYLAVIFCRTKVRAKKLNKDLQDLGFESDELHGDLTQAKREQVMKRFRDAKL 292 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 ILVATDVAARGL + VTHVFN+D+P D E Y+HRIGRTGRAG G +I++A Sbjct: 293 QILVATDVAARGLDVEGVTHVFNFDVPTDSEIYIHRIGRTGRAGQRGTAITIASPYDRAA 352 Query: 368 LPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPR 409 + IE I + D + P + ++ + Sbjct: 353 VAHIERSINAILERRTIEADGTIVKNTAPRSSSEGKSYDKKP 394 >UniRef50_Q4W7T8 VASA RNA helicase n=1 Tax=Artemia franciscana RepID=Q4W7T8_ARTSF Length = 726 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 132/380 (34%), Positives = 208/380 (54%), Gaps = 8/380 (2%) Query: 10 KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69 F L PK+++ ++K G+ TP+Q A+P+ + RD+ AQTG+GKT A+L + Sbjct: 305 SFDAAGLRPKILDNIKKSGYTQPTPVQKWAIPVIMKKRDLMACAQTGSGKTGAYLIPIIN 364 Query: 70 YLLSHP--AIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 L+ A + + P A++M PTRELA+QI +A + T +K + YGG Q Sbjct: 365 RLIEEGCAASSYDETQTPEAVVMCPTRELAIQIFKEAVKFSYDTIIKPVVVYGGVAPRYQ 424 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR-- 185 ++SG +IL+GT GRLID+ + N A + +VLDEADRM D+GF+ +++ + Sbjct: 425 SDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVLDEADRMLDMGFMGEVKKVVYHGT 484 Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245 MP +R ++FSAT V+ELA E + N ++ V + +E+ + ++ Sbjct: 485 MPVKVERNTLMFSATFPNEVQELAAEFLENYIFVTVGTVGGACMDVLQEVIEIDAKSRID 544 Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305 L ++ E+ + ++FA++K + + L+ + GD Q +R +L +F G Sbjct: 545 RLLEILTEKEGVKTLVFASSKKTADFLAALLSTKNLPATSIHGDRFQYQREEVLRDFKSG 604 Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEY- 364 +ILVAT VAARGL I V V NY+LP D ++YVHRIGRTGR G +GH+IS + Sbjct: 605 HRNILVATAVAARGLDIKGVGLVINYELPTDIDEYVHRIGRTGRLGNTGHAISFFNPDKD 664 Query: 365 ---ALNLPAIETYIGHSIPV 381 A L + ++PV Sbjct: 665 SAIAGKLVNVLAAAQQTVPV 684 >UniRef50_D0WN23 ATP-dependent RNA helicase DeaD n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WN23_9ACTO Length = 767 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 138/401 (34%), Positives = 212/401 (52%), Gaps = 10/401 (2%) Query: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 F D L ++ A+++ GF T IQA A+P+ L GRDV G AQTGTGKT AF + Sbjct: 129 FDDLGLPEDLLSAVKELGFSAPTAIQAAAIPILLRGRDVVGVAQTGTGKTAAFALPLLAH 188 Query: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-EATGLKLGLAYGGDGYDKQLK 129 + D + + +AL++APTRELA+Q E A ++ G+ + YGG Y QLK Sbjct: 189 I-------DPEKREVQALVLAPTRELAMQGAQAIESFAAKSRGVDVAAVYGGSSYLPQLK 241 Query: 130 VLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA 189 LE G +++GT GR++D + + L A++ VLDEAD M +GF +D+ + +P Sbjct: 242 ALEGGAQVVVGTPGRIMDLMDRGALRLDAVRYFVLDEADEMLRMGFAEDVEKIASEVPEG 301 Query: 190 NQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQT 249 R++ LFSAT+ +R +A +++AE + + T +K+ K+ L Sbjct: 302 --RISALFSATMPPPIRRVAERHLSDAEEVTISRPATTVSTVKQMYAVVPERHKIGALAR 359 Query: 250 LIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDI 309 ++ A++F T+ E++ L A G L+GDV QK+R +++ G LD+ Sbjct: 360 VLAVTEAQAALVFVRTRSTAEDLTIELGARGVATAALSGDVVQKEREKLVARLRDGTLDV 419 Query: 310 LVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLP 369 LVATDVAARGL + + V N+D+P + + YVHRIGRTGRAG +G SI+ + L Sbjct: 420 LVATDVAARGLDVDRIGLVVNFDVPRETDTYVHRIGRTGRAGRTGESITFVTPKERPRLR 479 Query: 370 AIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRR 410 IE G + + A ++ L + + R Sbjct: 480 RIEKQTGSRMEQIELPTPAEVSKLRARRTVEQAMARVAKGR 520 >UniRef50_Q17W71 ATP-dependent RNA helicase n=19 Tax=Helicobacter RepID=Q17W71_HELAH Length = 494 Score = 542 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 136/379 (35%), Positives = 209/379 (55%), Gaps = 10/379 (2%) Query: 8 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 67 + F+D L V++++ + GF + +PIQ A+P L GRDV QAQTGTGKT AF Sbjct: 21 KPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPI 80 Query: 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127 + L ++ I AL++ PTRELA+QI + L + T K YGG KQ Sbjct: 81 INNLKNNHTIE--------ALVITPTRELAMQISDEIFKLGKHTKTKTVCVYGGQSVKKQ 132 Query: 128 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP 187 + ++ ++I T GRL+D+ K + I+ +VVVLDE+D M D+GF+ DI +F +P Sbjct: 133 CEFIKKNPQVMIATPGRLLDHLKNDRIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLP 192 Query: 188 PANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLL 247 +LFSAT+ +++LA + + N I + P T I + + + E+ + Sbjct: 193 SEA--QILLFSATMPEPIKKLADKILENPIKIHIAPSNITNTDITQRFYVINEHERSEAI 250 Query: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307 L++ + P+++I+F TK +E+ L + ++ L GD+ Q+ R + F + D Sbjct: 251 MHLLDTQAPEKSIVFTRTKKEADELHQFLISKNYKSTALHGDMDQRDRRASIMAFKKNDA 310 Query: 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 D+LVATDVA+RGL I V+HVFNY LP + E Y+HRIGRTGRAG G +I+L Sbjct: 311 DVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKE 370 Query: 368 LPAIETYIGHSIPVSKYNP 386 L ++ I I + + Sbjct: 371 LLRMQKEIDSEIELFEIPT 389 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.205 0.787 Lambda K H 0.267 0.0629 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,880,831,447 Number of Sequences: 3077464 Number of extensions: 268096997 Number of successful extensions: 703129 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 8444 Number of HSP's successfully gapped in prelim test: 3637 Number of HSP's that attempted gapping in prelim test: 655706 Number of HSP's gapped (non-prelim): 22577 length of query: 421 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 290 effective length of database: 637,248,572 effective search space: 184802085880 effective search space used: 184802085880 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 96 (41.0 bits)