142 c1pjrA_ Probab=98.06   E-value=6.2e-05  Score=48.05  Aligned_columns=82  Identities=15%

Q ss_pred             CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             98798999999999769989999279984789999999999983522123356783799986559999999999999740
Q batch____        30 HNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE  109 (421)
Q Consensus        30 ~~~~~~Q~~ai~~il~g~~viv~apTGsGKTl~~~lp~l~~l~~~~~~~~~~~~~~~~lil~p~~~L~~q~~~~~~~~~~  109 (421)
                      ..+++-|.+||..  ....++|++|-|||||.+.+.-+...+........      ++|+++|++..+.++.+.+.....
T Consensus        10 ~~L~~~Q~~ai~~--~~~~~lV~GppGTGKT~~l~~~i~~ll~~~~~~~~------~ILv~s~tn~A~d~~~~ri~~~~~   81 (623)
T c1pjrA_          10 AHLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPW------NILAITFTNKAAREMRERVQSLLG   81 (623)
T ss_dssp             TTSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGG------GEEEEESSHHHHHHHHHHHHHHHG
T ss_pred             HCCCHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHH------HEEEECCCHHHHHHHHHHHHHHHC
T ss_conf             2038898999958--89978999488986779999999999980899977------878974698999999999999610


Q ss_pred             HCCCEEEEEE
Q ss_conf             3396089985
Q batch____       110 ATGLKLGLAY  119 (421)
Q Consensus       110 ~~~~~~~~~~  119 (421)
                      .....+..-+
T Consensus        82 ~~~~~~~i~T   91 (623)
T c1pjrA_          82 GAAEDVWIST   91 (623)
T ss_dssp             GGGTTSEEEE
T ss_pred             CCCCCCEEEE
T ss_conf             1102768975