27 c2c9oC_ Probab=99.94   E-value=3.2e-25  Score=158.75  Aligned_columns=249  Identities=17%

Q ss_pred             HHHCCCCCCCCHHHHCCCCCCCHHH-HCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE
Q ss_conf             9740657898735522126898778-228099999999999853303567880899759988888999999998389807
Q batch____         6 RLISAGTTLPEDVADRAIRPKLLEE-YVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLR   84 (336)
Q Consensus         6 ~~~s~~~~~~~~~~~~k~rP~~~~d-ivG~e~~~~~l~~~i~~~~~~~~~~~~ill~GppGtGKTtla~~ia~~l~~~~~   84 (336)
                      +.++.-.++-.-.++.++||+.+.| +|||+++++++..++...+.......++||+||||||||++|++++++++..+.
T Consensus         7 ~~~~~~~h~~~l~l~~~~~~~~~~~~ivGqe~~~~~l~~~l~~i~~~~~~~~~iLl~GppGtGKT~la~ala~~l~~~~~   86 (311)
T c2c9oC_           7 QRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVP   86 (311)
T ss_dssp             GGTGGGTTCCSCCBCTTSCBCSEETTEESCHHHHHHHHHHHHHHHTTCCTTCEEEEECCTTSSHHHHHHHHHHHHCTTSC
T ss_pred             HHHHHHHHHHCCCCCHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf             88878988743786211021000001358599999999999999707778866999818998489999999986068986


Q ss_pred             EEEEEECCCHHHHHHHHHH---------------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE-----
Q ss_conf             9710001326674567653---------------------02467532899985007765200133213334331-----
Q batch____        85 TTSGPVLEKAGDLAAMLTN---------------------LEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIM-----  138 (336)
Q Consensus        85 ~i~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~de~~~l~~~~~~~~~~~~~~~~~~~~-----  138 (336)
                      .+.................                     .......++|+++.+..................+.     
T Consensus        87 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (311)
T c2c9oC_          87 FCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKKKEIIQDVTLHDLDVAGEINKVVNKYIDQGIAELVPGVLFVDEV  166 (311)
T ss_dssp             EEEEEGGGGCCSSSCHHHHHHHHHHHTEEEEEEEECCEEEEEEEHHHHHTTCCCHHHHHHHHHHTTSEEEEECEEEEECG
T ss_pred             EEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCHHCCEEEEEECCCE
T ss_conf             79722445010011124554432100024566542001122102102467652036555430210000121688523650


Q ss_pred             ---CHHHHHHHHHHCCCCCCEEEEE-------------ECCCCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             ---0134676651112467138874-------------057223760221111000115689989999999999998289
Q batch____       139 ---IGEGPAARSIKIDLPPFTLIGA-------------TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGL  202 (336)
Q Consensus       139 ---~~~~~~~~~~~~~~~~~~~i~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  202 (336)
                         .......+...++......++.             +.+..........+++..+.+.+++.+++..++..++.....
T Consensus       167 ~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~R~~~~~~~~~~~~~~~~il~~~~~~~~~  246 (311)
T c2c9oC_         167 HMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGI  246 (311)
T ss_dssp             GGCBHHHHHHHHHHHTSSSCCEEEEEECCSEEECBTTSSCEEETTCCHHHHTTEEEEECCCCCHHHHHHHHHHHHHHTTC
T ss_pred             ECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
T ss_conf             10269999997553014653158861465213323310356267728688988776331245778899999998641488


Q ss_pred             CCCHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
Q ss_conf             87179999999983-99989999999999999974186875999999999760
Q batch____       203 EMSDDGALEVARRA-RGTPRIANRLLRRVRDFAEVKHDGTISADIAAQALDML  254 (336)
Q Consensus       203 ~~~~~~~~~ia~~~-~G~~r~a~~ll~~~~~~a~~~~~~~i~~~~~~~~l~~~  254 (336)
                      .+++++++.+++.+ +|++|.++++++.+...|...+.+.|+.++++++.+.+
T Consensus       247 ~~~~~~l~~i~~~~~~~~~R~~~~ll~~A~~~A~~~g~~~I~~edi~~a~~~~  299 (311)
T c2c9oC_         247 NISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELF  299 (311)
T ss_dssp             CBCHHHHHHHHHHHHHSCHHHHHHTHHHHHHHHHHTTCSSBCHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             99989999999836899989999999999999986189833899999999998