42 c1s3sA_ Probab=99.89   E-value=1.4e-22  Score=144.01  Aligned_columns=237  Identities=22%

Q ss_pred             CCCCCCCHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHH--------CCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf             65789873552212689877822809999999999985330--------3567880899759988888999999998389
Q batch____        10 AGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKL--------RGDALDHLLIFGPPGLGKTTLANIVANEMGV   81 (336)
Q Consensus        10 ~~~~~~~~~~~~k~rP~~~~divG~e~~~~~l~~~i~~~~~--------~~~~~~~ill~GppGtGKTtla~~ia~~l~~   81 (336)
                      .+...............+|+++.|.++++++|+.++.....        ....+.++||+||||||||++++++|++++.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~dIgGl~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~~~  242 (436)
T c1s3sA_         163 EGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA  242 (436)
T ss_dssp             CSCCBCCCTTCCCTTSCCGGGCCSCHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf             15544432101235678953420549999999999997501889897488998753898679989978999999874499


Q ss_pred             CEEEEEEEECCCH--------HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHCCCC
Q ss_conf             8079710001326--------67456765302467532899985007765200133213334331013467665111246
Q batch____        82 NLRTTSGPVLEKA--------GDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLP  153 (336)
Q Consensus        82 ~~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~de~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (336)
                      +++.+++..+...        -............+++++|+++.+.......     .......................
T Consensus       243 ~~~~i~~~~l~~~~~g~~e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  317 (436)
T c1s3sA_         243 FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-----HGEVERRIVSQLLTLMDGLKQRA  317 (436)
T ss_dssp             EEEEEEHHHHHTSCTTHHHHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSC-----CCTTHHHHHHHHHHHHHHCCGGG
T ss_pred             CEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCC-----CCHHHHHHHHHHHHHHCCCCCCC
T ss_conf             5899730687001001588889999999975099489840000321025788-----74588999999986430222469


Q ss_pred             CCEEEEEECCCCCCCHHHH--CCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC-CHHHHHHHHHHH
Q ss_conf             7138874057223760221--1110001156899899999999999982898717999999998399-989999999999
Q batch____       154 PFTLIGATTRAGSLTSPLR--DRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG-TPRIANRLLRRV  230 (336)
Q Consensus       154 ~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ia~~~~G-~~r~a~~ll~~~  230 (336)
                      ++++|++|+++..+++.+.  .||...+.++.|+.+++..|+..+.......-+.+ +..|+..+.| .+.+...+++.+
T Consensus       318 ~v~vi~tt~~~~~l~~~l~r~~rf~~~i~~~~P~~~~R~~Il~~~~~~~~l~~d~~-~~~la~~t~g~~~~dl~~l~~~a  396 (436)
T c1s3sA_         318 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD-LEQVANETHGHVGADLAALCSEA  396 (436)
T ss_dssp             CEEEEEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSEECTTCC-HHHHHTTCCSCCHHHHHHHHHHH
T ss_pred             CEEEEEECCCHHHCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             87999844895888824204240303666789899999999999843898988668-78899876899889999999999


Q ss_pred             HHHHHHC-----------------CCCCCCHHHHHHHHH
Q ss_conf             9999741-----------------868759999999997
Q batch____       231 RDFAEVK-----------------HDGTISADIAAQALD  252 (336)
Q Consensus       231 ~~~a~~~-----------------~~~~i~~~~~~~~l~  252 (336)
                      ...+..+                 ....++..++.+++.
T Consensus       397 ~~~a~~r~~~~~~~~~~~~~~~~~~~~~v~~~df~~al~  435 (436)
T c1s3sA_         397 ALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALS  435 (436)
T ss_dssp             HHHHHHHHTTTTTCSSCCCBHHHHHHCEECHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHH
T ss_conf             999999888640200210387667301016998998860