85 c1ny5A_ Probab=99.60   E-value=4.1e-14  Score=96.87  Aligned_columns=208  Identities=18%

Q ss_pred             HCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH---HCCCEEEEEEEECCCHHHHHHH-------
Q ss_conf             228099999999999853303567880899759988888999999998---3898079710001326674567-------
Q batch____        31 YVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANE---MGVNLRTTSGPVLEKAGDLAAM-------  100 (336)
Q Consensus        31 ivG~e~~~~~l~~~i~~~~~~~~~~~~ill~GppGtGKTtla~~ia~~---l~~~~~~i~~~~~~~~~~~~~~-------  100 (336)
                      ++|......++...+...   .....+|+|+|++||||+++|++++..   -..+|+.++|..+....-....       
T Consensus       139 lig~S~~m~~l~~~i~~~---A~~~~~vli~Ge~GtGK~~~A~~iH~~s~~~~~~fi~v~c~~~~~~~~~~~lfg~~~~~  215 (384)
T c1ny5A_         139 YVFESPKMKEILEKIKKI---SCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGA  215 (384)
T ss_dssp             CCCCSHHHHHHHHHHHHH---TTCCSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHHHHCBCTTS
T ss_pred             CCCCCHHHHHHHHHHHHC---CCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
T ss_conf             222101355432222102---34453200046666738999999773163148766995233289778656640522356


Q ss_pred             ----------HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHCCCCCCEEEEEECCC------
Q ss_conf             ----------6530246753289998500776520013321333433101346766511124671388740572------
Q batch____       101 ----------LTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRA------  164 (336)
Q Consensus       101 ----------~~~~~~~~~~~~de~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------  164 (336)
                                ....+.++++|+++++.+....|..+..+++.+........       ......+.+|++++..      
T Consensus       216 ~~~~~~~~~g~~~~a~~gTL~l~~i~~l~~~~Q~~L~~~l~~~~~~~~~~~-------~~~~~~~rii~~s~~~l~~l~~  288 (384)
T c1ny5A_         216 FTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGR-------KEIEVNVRILAATNRNIKELVK  288 (384)
T ss_dssp             STTCCSCBCCHHHHTTTSEEEEESGGGCCHHHHHHHHHHHHHSEECCBTCC-------SCEECCCEEEEEESSCHHHHHH
T ss_pred             CCCCCCCCCCHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCC-------CCCCCCEEEEECCCCCHHHHHH
T ss_conf             666521234625303698599953578899999999999733937677898-------8014660685147789789998


Q ss_pred             --CCCCHHHHCCCHHHCCCCCCCH--HHHHHHHHHHHHH-------CCCCCCHHHHHHHHHH-CCCCHHHHHHHHHHHHH
Q ss_conf             --2376022111100011568998--9999999999998-------2898717999999998-39998999999999999
Q batch____       165 --GSLTSPLRDRFGIVQRLEFYQV--PDLQYIVSRSARF-------MGLEMSDDGALEVARR-ARGTPRIANRLLRRVRD  232 (336)
Q Consensus       165 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~-------~~~~~~~~~~~~ia~~-~~G~~r~a~~ll~~~~~  232 (336)
                        .....-..+-....+.++++..  +++..+...+...       ....+++++.+.+..+ |+||+|+..+++++++.
T Consensus       289 ~~~f~~~L~~~l~~~~i~vPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~~s~~a~~~L~~~~WpgNv~eL~~~i~~~~~  368 (384)
T c1ny5A_         289 EGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVL  368 (384)
T ss_dssp             TTSSCHHHHHHHTTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf             78976578984183599728734382238999999999999993669986698999998638878717899999999999


Q ss_pred             HHHHCCCCCCCHHHHHHHH
Q ss_conf             9974186875999999999
Q batch____       233 FAEVKHDGTISADIAAQAL  251 (336)
Q Consensus       233 ~a~~~~~~~i~~~~~~~~l  251 (336)
                      .+.   ...|+.+++...+
T Consensus       369 ~~~---~~~i~~~~l~~~~  384 (384)
T c1ny5A_         369 FSE---GKFIDRGELSCLV  384 (384)
T ss_dssp             HCC---SSEECHHHHHHHC
T ss_pred             HCC---CCEECHHHCCCCC
T ss_conf             678---9802588823369