HHsearch 1.5 NAME batch____ FAM FILE query COM //bmm/www/servers/phyre2/HH/hhmake -i /bmm/www/servers/phyre2/public_html/phyre2_output/82367923c6637c53/query.a3m -o /bmm/www/servers/phyre2/public_html/phyre2_output/82367923c6637c53/query.hhm DATE Sun Jan 15 23:25:46 2012 LENG 95 match states, 95 columns in multiple alignment FILT 4 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.9 EVD 0.4250 0.6492 SEQ >ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCC >ss_conf 96436665874454318655120437655530010120146676530635788888878898735479999999960887477887543211479 >Consensus mxNHFgxGvmaGlkxxxxxsaxxvxxxCxDYrRGyvxGxshxxxexxgdRqxaAxeAGxlxrrYGLerdxvxxFFxexxxxxxxRffxaGYxxxx >batch____ MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN >UniRef50_B7LPW9(40-134:134) Putative uncharacterized protein yghW n=10 Tax=Enterobacteriaceae RepID=B7LPW9_ESCF3 E=8e-38 s/c=1.65 id=89% cov=101% MNNHFGKGLMAGLNATHADSAQSVAKFCADYKRGFVLGFSHRMYEKTGDRQLSAWEAGILTKRYGLDKDMVMDFFRENNSSTTLRFFMAGYRLEH >UniRef50_D0KE57(1-91:97) Putative uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=D0KE57_PECWW E=1e-29 s/c=1.43 id=47% cov=97% MGNHFERGVLAGLRSANPKSTNDINPYCYDYRRGYICGYAHNLAETKGDRQQAAFEAGLLSRRYGLERERVAEFFTEQGNPYAIRFFYAGY---- >UniRef50_C5BBK2(4-92:95) Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5BBK2_EDWI9 E=2e-12 s/c=0.80 id=33% cov=95% --NHFGDGVMDGVKCYEPCGAGEMRRRCFDYRRGYVCGFSYSFARRIDNRYMAACRAGERARLYGLERDAIAGFFLSGEDSQLQRYYYTGY---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1497 0 0 N 2 * * * * * 1295 * * * * * 755 * * * * * * * * 2 0 * * * * * * 1497 0 0 N 3 * * * * * * * * * * * 0 * * * * * * * * 3 0 * * * * * * 1893 0 0 H 4 * * * * * * 0 * * * * * * * * * * * * * 4 0 * * * * * * 1893 0 0 F 5 * * * * 0 * * * * * * * * * * * * * * * 5 0 * * * * * * 1893 0 0 G 6 * * * 1871 * 461 * * * * * * * * * * * * * * 6 0 * * * * * * 1893 0 0 K 7 * * 1686 * * * * * 1266 * * * * * 1871 * * * * * 7 0 * * * * * * 1893 0 0 G 8 * * * * * 0 * * * * * * * * * * * * * * 8 0 * * * * * * 1893 0 0 L 9 * * * * * * * * * 1266 * * * * * * * 775 * * 9 0 * * * * * * 1893 0 0 M 10 * * * * * * * * * 1871 461 * * * * * * * * * 10 0 * * * * * * 1893 0 0 A 11 537 * 1686 * * * * * * * * * * * * * * * * * 11 0 * * * * * * 1893 0 0 G 12 * * * * * 0 * * * * * * * * * * * * * * 12 0 * * * * * * 1893 0 0 L 13 * * * * * * * * * 537 * * * * * * * 1686 * * 13 0 * * * * * * 1893 0 0 K 14 * * * * * * * * 952 * * 2253 * * 1871 * * * * * 14 0 * * * * * * 1893 0 0 A 15 1266 1686 * * * * * * * * * * * * * 1871 * * * * 15 0 * * * * * * 1893 0 0 T 16 1871 * * * * * * * * * * * * * * * 1266 * * 1686 16 0 * * * * * * 1893 0 0 H 17 * * * 1686 * * 1266 * * * * 1871 * * * * * * * * 17 0 * * * * * * 1893 0 0 A 18 1266 * * * * * * * * * * * 775 * * * * * * * 18 0 * * * * * * 1893 0 0 D 19 * 1686 1266 * * * * * 1871 * * * * * * * * * * * 19 0 * * * * * * 1893 0 0 S 20 * * * * * 1686 * * * * * * * * * 537 * * * * 20 0 * * * * * * 1893 0 0 A 21 461 * * * * * * * * * * * * * * * 1871 * * * 21 0 * * * * * * 1893 0 0 V 22 * * * * * 1686 * * * * * 1871 * 2253 * * * 2279 * * 22 0 * * * * * * 1893 0 0 N 23 * * 1871 1686 * * * * * * * 2279 * * * 2253 * * * * 23 0 * * * * * * 1893 0 0 V 24 * * * * * * * 1871 * * 1686 * * * * * * 1266 * * 24 0 * * * * * * 1893 0 0 T 25 2253 * * * * * * * * * * 1871 * * 1686 * 2279 * * * 25 0 * * * * * * 1893 0 0 K 26 * * * * * * * * 1266 * * * 1871 * 1686 * * * * * 26 0 * * * * * * 1893 0 0 F 27 * * * * 1266 * * * * * * * * * 1686 * * * * 1871 27 0 * * * * * * 1893 0 0 C 28 * 0 * * * * * * * * * * * * * * * * * * 28 0 * * * * * * 1893 0 0 A 29 1266 * * * 1686 * * * * * * * * * * * * * * 1871 29 0 * * * * * * 1893 0 0 D 30 * * 0 * * * * * * * * * * * * * * * * * 30 0 * * * * * * 1893 0 0 Y 31 * * * * * * * * * * * * * * * * * * * 0 31 0 * * * * * * 1893 0 0 K 32 * * * * * * * * 1266 * * * * * 775 * * * * * 32 0 * * * * * * 1893 0 0 R 33 * * * * * * * * * * * * * * 0 * * * * * 33 0 * * * * * * 1893 0 0 G 34 * * * * * 0 * * * * * * * * * * * * * * 34 0 * * * * * * 1893 0 0 F 35 * * * * 1266 * * * * * * * * * * * * * * 775 35 0 * * * * * * 1893 0 0 V 36 * * * * * * * 1871 * * * * * * * * * 461 * * 36 0 * * * * * * 1893 0 0 L 37 * 775 * * * * * * * 1266 * * * * * * * * * * 37 0 * * * * * * 1893 0 0 G 38 * * * * * 0 * * * * * * * * * * * * * * 38 0 * * * * * * 1893 0 0 Y 39 * * * * 942 * * * * * * * * * * * * * * 1061 39 0 * * * * * * 1893 0 0 S 40 1871 * * * * * * * * * * * * * * 461 * * * * 40 0 * * * * * * 1893 0 0 H 41 * * * * * * 537 * * * * * * * * * * * * 1686 41 0 * * * * * * 1893 0 0 R 42 * * * * * * * * * * * 1871 * * 1266 1686 * * * * 42 0 * * * * * * 1893 0 0 M 43 * * * * 1686 * * * * 1871 1266 * * * * * * * * * 43 0 * * * * * * 1893 0 0 Y 44 775 * * * * * * * * * * * * * * * * * * 1266 44 0 * * * * * * 1893 0 0 E 45 * * * 537 * * * * * * * * * * 1686 * * * * * 45 0 * * * * * * 1893 0 0 K 46 * * * * * * * * 1266 * * * * * 1686 * 1871 * * * 46 0 * * * * * * 1893 0 0 T 47 * * * * * * * 1686 1871 * * * * * * * 1266 * * * 47 0 * * * * * * 1893 0 0 G 48 * * 1686 * * 537 * * * * * * * * * * * * * * 48 0 * * * * * * 1893 0 0 D 49 * * 537 * * * * * * * * 1686 * * * * * * * * 49 0 * * * * * * 1893 0 0 R 50 * * * * * * * * * * * * * * 0 * * * * * 50 0 * * * * * * 1893 0 0 Q 51 * * * * * * * * * * * * * 537 * * * * * 1686 51 0 * * * * * * 1893 0 0 L 52 * * * * * * * * * 1266 1686 * * 1871 * * * * * * 52 0 * * * * * * 1893 0 0 S 53 775 * * * * * * * * * * * * * * 1266 * * * * 53 0 * * * * * * 1893 0 0 A 54 0 * * * * * * * * * * * * * * * * * * * 54 0 * * * * * * 1893 0 0 W 55 * 1686 * * 1871 * * * * * * * * * * * * * 1266 * 55 0 * * * * * * 1893 0 0 E 56 * * * 537 * * * * * * * * * * 1686 * * * * * 56 0 * * * * * * 1893 0 0 A 57 0 * * * * * * * * * * * * * * * * * * * 57 0 * * * * * * 1893 0 0 G 58 * * * * * 0 * * * * * * * * * * * * * * 58 0 * * * * * * 1893 0 0 I 59 * * * 1686 * * * 1266 * 1871 * * * * * * * * * * 59 0 * * * * * * 1893 0 0 L 60 * * * * * * * * * 537 * * * * 1686 * * * * * 60 0 * * * * * * 1893 0 0 T 61 1686 * * * * * * * * * * * * * * 1871 1266 * * * 61 0 * * * * * * 1893 0 0 R 62 * * * * * * * * 2253 * * * * * 340 * * * * * 62 0 * * * * * * 1893 0 0 R 63 * * * * * * * * * 1686 * * * * 537 * * * * * 63 0 * * * * * * 1893 0 0 Y 64 * * * * * * * * * * * * * * * * * * * 0 64 0 * * * * * * 1893 0 0 G 65 * * * * * 0 * * * * * * * * * * * * * * 65 0 * * * * * * 1893 0 0 L 66 * * * * * * * * * 0 * * * * * * * * * * 66 0 * * * * * * 1893 0 0 D 67 * * 1266 775 * * * * * * * * * * * * * * * * 67 0 * * * * * * 1893 0 0 K 68 * * * * * * * * 1266 * * * * * 775 * * * * * 68 0 * * * * * * 1893 0 0 E 69 * * 942 1061 * * * * * * * * * * * * * * * * 69 0 * * * * * * 1893 0 0 M 70 1686 * * * * * * * * * 1266 * * * 1871 * * * * * 70 0 * * * * * * 1893 0 0 V 71 * * * * * * * 1686 * * * * * * * * * 537 * * 71 0 * * * * * * 1893 0 0 M 72 775 * * * * * * * * * 1266 * * * * * * * * * 72 0 * * * * * * 1893 0 0 D 73 * * 1266 1871 * 1686 * * * * * * * * * * * * * * 73 0 * * * * * * 1893 0 0 F 74 * * * * 0 * * * * * * * * * * * * * * * 74 0 * * * * * * 1893 0 0 F 75 * * * * 0 * * * * * * * * * * * * * * * 75 0 * * * * * * 1893 0 0 R 76 * * * * * * * * * 1686 * * * * 1266 * 1871 * * * 76 0 * * * * * * 1893 0 0 E 77 * * * 537 * * * * * * * * * * * 1686 * * * * 77 0 * * * * * * 1893 0 0 N 78 * * * * * 1686 * * * * * 1266 * 1871 * * * * * * 78 0 * * * * * * 1893 0 0 N 79 * * * 1686 * 1871 * * * * * 1266 * * * * * * * * 79 0 * * * * * * 1893 0 0 S 80 * * 1686 * * * * * * * * 1871 * * * 1266 * * * * 80 0 * * * * * * 1893 0 0 C 81 * 2279 * * * * * * * * * * 1871 * * 942 * * * * 81 0 * * * * * * 1893 0 0 S 82 * * * * * * * * * * * * * 1686 * 2279 2253 * * 1871 82 0 * * * * * * 1893 0 0 T 83 1871 * * * * * * * * 1686 * * * * * * 1266 * * * 83 0 * * * * * * 1893 0 0 L 84 * * * * * * * 1871 * 1266 * * * 1686 * * * * * * 84 0 * * * * * * 1893 0 0 R 85 * * * * * * * * * * * * * * 0 * * * * * 85 0 * * * * * * 1893 0 0 F 86 * * * * 537 * * * * * * * * * * * * * * 1686 86 0 * * * * * * 1893 0 0 F 87 * * * * 537 * * * * * * * * * * * * * * 1686 87 0 * * * * * * 1893 0 0 M 88 * * * * * * * * * * 1266 * * * * * * * * 775 88 0 * * * * * * 1893 0 0 A 89 537 * * * * * * * * * * * * * * * 1686 * * * 89 0 * * * * * * 1893 0 0 G 90 * * * * * 0 * * * * * * * * * * * * * * 90 0 * * * * * * 1893 0 0 Y 91 * * * * * * * * * * * * * * * * * * * 0 91 0 * * * * * * 1893 0 0 R 92 * * * * * * * * * * * * * * 0 * * * * * 92 0 * * * * * * 1076 0 0 L 93 * * * * * * * * * 0 * * * * * * * * * * 93 0 * * * * * * 1076 0 0 E 94 * * * 0 * * * * * * * * * * * * * * * * 94 0 * * * * * * 1076 0 0 N 95 * * * * * * 1000 * * * * 1000 * * * * * * * * 95 0 * * 0 * * * 1076 0 0 //