 |
| Job Description | P31453 | | Confidence | 91.53% | Date | Thu Jan 5 11:47:45 GMT 2012 |
| Rank | 209 | Aligned Residues | 53 |
| % Identity | 19% | Template | d1sd4a_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Penicillinase repressor
|
| Resolution | 2.00 |
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | I | R | L | N | S | A | D | F | T | L | N | S | L | L | P | G | E | K | K | L | A | E | E | F | . |
. |
. |
. |
A | V | S | R | M | T | I | R | K | A | I | D | L | L | V | A | W | G | L | V | V | R | R | H | G | S | G | T | Y | L |
| Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|
|
|   |   |   | . | . | . | . |
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|
|   |   |
|
|   |   |   | . |   |   | . |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |
|   |
|   |   |   |
|
|   |   |   |
| Template Sequence |   |
E | W | D | V | X | N | I | I | W | D | K | K | . |
S | V | . |
S | A | N | E | I | V | V | E | I | Q | K | Y | K | E | V | S | D | K | T | I | R | T | L | I | T | R | L | Y | K | K | E | I | I | K | R | Y | K | S | E | N | I | Y | F |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S | S | . | S |  | . |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T | T |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|