50 c3gohA_ Probab=100.00  E-value=8.3e-41  Score=250.96  Aligned_columns=294  Identities=21%

Q ss_pred             CCEEEEEEECCC-CCEEEEEECCCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCEECCEEEEEEEEEE
Q ss_conf             943699998599-7289998227878986389999999738999998849875544445565668702110349999770
Q batch____         1 MKTMLAAYLPGN-STVDLREVAVPTPGINQVLIKMKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAM   79 (353)
Q Consensus         1 MktmkA~~~~g~-~~l~~~~~p~P~~~~~eVlVrv~a~~in~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (353)
                      .+++||+.|.++ ++|+++|+|+|+|+++||||||+|+||||+|+++++|.+....        +|.++|||++|+|+++
T Consensus         1 ~~~~~~~~~~~~~~~l~l~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~--------~p~v~G~e~~G~Vv~v   72 (297)
T c3gohA_           1 XEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWS--------NGHVPGVDGAGVIVKV   72 (297)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCC--------TTCCCCSEEEEEEEEE
T ss_pred             CCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCC--------CCCCCCCCEEEEEEEE
T ss_conf             97418999707986389998317867986389999999739999999859998888--------9752562247999983


Q ss_pred             CCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCCCCCHHHCCCCCCC
Q ss_conf             78888852278799986167788777742033435554443355668984236997334645534467763320232012
Q batch____        80 GQGCRHFKEGDRVLVYHISGCGFCPNCRRGFPISCTGEGKAAYGWQRDGGHAEYLLAEEKDLILLPDALSYEDGAFISCG  159 (353)
Q Consensus        80 G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (353)
                      |++++.+++||+|.....                          ....+..+.+...+.......+...+..........
T Consensus        73 g~~v~~~~~g~~v~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (297)
T c3gohA_          73 GAKVDSKXLGRRVAYHTS--------------------------LKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCP  126 (297)
T ss_dssp             CTTSCGGGTTCEEEEECC--------------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHH
T ss_pred             CCCCCEEEECCCEEEEEE--------------------------CCCCCCEEEEEEECHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             389845420262588740--------------------------345431001464201014446898642112212221


Q ss_pred             CEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHC
Q ss_conf             00110223333343320476431043102025678865972999932624555556420573255418720178898742
Q batch____       160 VGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDMLPERLAMAKQLGVMDHGYLATTEGLPQIIAEL  239 (353)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (353)
                      ..+................+..+.+.++....+.....+...+.+.  .+.+...+...+.+....+....         
T Consensus       127 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ga~~v~~~~~~~---------  195 (297)
T c3gohA_         127 LLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQXLNNAGYVVDLVS--ASLSQALAAKRGVRHLYREPSQV---------  195 (297)
T ss_dssp             HHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC--SSCCHHHHHHHTEEEEESSGGGC---------
T ss_pred             CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEC--CHHHHHHHHHCCCCEEECCCCCC---------
T ss_conf             0010011123465798358998435300578889986398479983--99998889974997999063347---------


Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCC
Q ss_conf             67750232102467467888886417882899956888755444366863560799997799899999999998589976
Q batch____       240 THGGADVALDCSGNAAGRLLALQSTADWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWP  319 (353)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~g~l~~  319 (353)
                       ..+.|.++++.+        +..++.+|+++.++...............+...+.+++....++++++++|+++|++++
T Consensus       196 -~~~~d~vid~~~--------~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  266 (297)
T c3gohA_         196 -TQKYFAIFDAAL--------VPSLKANGHIICIQDRRTISYHEIALGALHDFGDRQDWQILXQQGEALLTLIAQGKXEI  266 (297)
T ss_dssp             -CSCEEEEECCTT--------GGGEEEEEEEEEECCCCCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             -CCCEEEEECCCC--------HHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCC
T ss_conf             -831018984820--------67634897899986778755333210024655799862102889999999998389976


Q ss_pred             CCCEEEEEEHHHHHHHHHHHHCCCC-CEEEEE
Q ss_conf             4322577509999999999987998-579998
Q batch____       320 RNAITHRFSLEQAGDAYALMASGKC-GKVVIN  350 (353)
Q Consensus       320 ~~~i~~~~~le~~~~A~~~l~~g~~-gKvVi~  350 (353)
                        .++++|+|+|+++||+++++|+. ||+||+
T Consensus       267 --~i~~~~~l~~~~~A~~~~~~g~~~gkvvi~  296 (297)
T c3gohA_         267 --AAPDIFRFEQXIEALDHSEQTKLKTVLTLN  296 (297)
T ss_dssp             --CCCEEEEGGGHHHHHHHHHHHCCCEEEESC
T ss_pred             --CEEEEEEHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             --514684278889999999819980799823