BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (350 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A6TH78 Putative ribosome biogenesis GTPase rsgA n=304 T... 644 0.0 UniRef50_C9PQI0 Putative uncharacterized protein n=1 Tax=Pasteur... 407 e-112 UniRef50_A8FRC7 Ribosome small subunit-dependent GTPase A n=9 Ta... 376 e-103 UniRef50_Q0VMD9 Putative ribosome biogenesis GTPase rsgA n=40 Ta... 304 3e-81 UniRef50_C5BRI8 Ribosome small subunit-dependent GTPase A n=1 Ta... 290 6e-77 UniRef50_Q21H92 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 281 2e-74 UniRef50_Q5ZRX8 EngC GTPase n=6 Tax=Legionella RepID=Q5ZRX8_LEGPH 262 1e-68 UniRef50_B7H060 Ribosome small subunit-dependent GTPase A n=17 T... 254 3e-66 UniRef50_C7R8R7 Sigma 54 interacting domain protein n=1 Tax=Kang... 240 6e-62 UniRef50_A5WDM1 Ribosome small subunit-dependent GTPase A n=4 Ta... 237 4e-61 UniRef50_A0Z0P9 Ribosome-associated GTPase n=1 Tax=marine gamma ... 237 5e-61 UniRef50_A0LCF1 Ribosome small subunit-dependent GTPase A n=1 Ta... 230 6e-59 UniRef50_Q31HZ7 Ribosome small subunit-dependent GTPase A n=1 Ta... 224 5e-57 UniRef50_D1KB75 GTPase n=1 Tax=uncultured SUP05 cluster bacteriu... 219 1e-55 UniRef50_C5S7F8 Ribosome small subunit-dependent GTPase A n=1 Ta... 217 4e-55 UniRef50_B5JX14 Ribosome small subunit-dependent GTPase A n=1 Ta... 215 2e-54 UniRef50_A1AWN3 Ribosome small subunit-dependent GTPase A n=2 Ta... 215 2e-54 UniRef50_B8GPJ8 Ribosome-associated GTPase n=1 Tax=Thioalkalivib... 214 4e-54 UniRef50_Q0A8I5 Ribosome small subunit-dependent GTPase A n=1 Ta... 213 7e-54 UniRef50_Q60BE0 Putative uncharacterized protein n=1 Tax=Methylo... 210 5e-53 UniRef50_A0Q5F4 GTPase n=18 Tax=Francisella RepID=A0Q5F4_FRATN 204 5e-51 UniRef50_C4ZNY5 Ribosome small subunit-dependent GTPase A n=3 Ta... 202 1e-50 UniRef50_Q2YB53 Putative ribosome biogenesis GTPase rsgA n=6 Tax... 202 2e-50 UniRef50_B3QL20 Putative ribosome biogenesis GTPase rsgA n=11 Ta... 199 1e-49 UniRef50_D0L125 Ribosome small subunit-dependent GTPase A n=1 Ta... 197 6e-49 UniRef50_A5EV96 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 192 1e-47 UniRef50_B2JF36 Putative ribosome biogenesis GTPase rsgA n=56 Ta... 190 7e-47 UniRef50_C9RJ19 Ribosome small subunit-dependent GTPase A n=1 Ta... 188 3e-46 UniRef50_B3QS55 Ribosome small subunit-dependent GTPase A n=1 Ta... 187 3e-46 UniRef50_D1R990 Putative uncharacterized protein n=1 Tax=Parachl... 186 8e-46 UniRef50_C5D8S1 Putative ribosome biogenesis GTPase rsgA n=6 Tax... 183 9e-45 UniRef50_UPI000190AB8D ribosome-associated GTPase n=2 Tax=Salmon... 182 2e-44 UniRef50_C5CF78 Ribosome small subunit-dependent GTPase A n=1 Ta... 182 2e-44 UniRef50_B9K7Z8 Putative ribosome biogenesis GTPase rsgA n=7 Tax... 181 2e-44 UniRef50_D1T763 Ribosome small subunit-dependent GTPase A n=2 Ta... 181 4e-44 UniRef50_C9MMH3 Ribosome small subunit-dependent GTPase A n=7 Ta... 181 5e-44 UniRef50_D2R982 Ribosome small subunit-dependent GTPase A n=1 Ta... 180 8e-44 UniRef50_C6WWG3 Ribosome small subunit-dependent GTPase A n=4 Ta... 179 1e-43 UniRef50_Q11RI7 Putative ribosome biogenesis GTPase rsgA n=3 Tax... 178 3e-43 UniRef50_A7HNP9 Ribosome small subunit-dependent GTPase A n=5 Ta... 176 1e-42 UniRef50_A1HMW6 Ribosome small subunit-dependent GTPase A n=1 Ta... 176 1e-42 UniRef50_C1ABL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 175 2e-42 UniRef50_A6GW90 Putative ribosome biogenesis GTPase rsgA n=25 Ta... 175 2e-42 UniRef50_Q7UUZ6 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 174 5e-42 UniRef50_Q6MEY3 Putative uncharacterized protein n=1 Tax=Candida... 174 6e-42 UniRef50_A1KRU2 Putative ribosome biogenesis GTPase rsgA n=29 Ta... 173 7e-42 UniRef50_B9L2Y7 Ribosome small subunit-dependent GTPase A n=2 Ta... 171 3e-41 UniRef50_A3ZVZ2 Putative uncharacterized protein n=2 Tax=Plancto... 171 4e-41 UniRef50_B1YIP8 Ribosome small subunit-dependent GTPase A n=2 Ta... 171 5e-41 UniRef50_A8FD43 Putative ribosome biogenesis GTPase rsgA n=131 T... 170 9e-41 UniRef50_A4J589 Ribosome small subunit-dependent GTPase A n=3 Ta... 169 2e-40 UniRef50_C0YJK5 GTP-binding protein n=1 Tax=Chryseobacterium gle... 169 2e-40 UniRef50_C1ZE03 Ribosome small subunit-dependent GTPase A n=2 Ta... 168 2e-40 UniRef50_D2MKL2 GTPase EngC n=1 Tax=Candidatus Poribacteria sp. ... 166 8e-40 UniRef50_C7HYF6 Ribosome small subunit-dependent GTPase A n=1 Ta... 165 2e-39 UniRef50_O66555 Putative ribosome biogenesis GTPase rsgA n=7 Tax... 164 3e-39 UniRef50_C6X5X0 Ribosome small subunit-stimulated GTPase EngC n=... 164 3e-39 UniRef50_A7Z4J8 Putative ribosome biogenesis GTPase rsgA n=31 Ta... 164 4e-39 UniRef50_D2QSL3 Ribosome small subunit-dependent GTPase A n=2 Ta... 163 7e-39 UniRef50_D1BMC8 Ribosome small subunit-dependent GTPase A n=3 Ta... 163 1e-38 UniRef50_A9WK24 Ribosome small subunit-dependent GTPase A n=6 Ta... 162 2e-38 UniRef50_C9LUJ5 Ribosome small subunit-dependent GTPase A n=2 Ta... 162 2e-38 UniRef50_A4SW79 Ribosome small subunit-dependent GTPase A n=2 Ta... 162 2e-38 UniRef50_C9R7Y8 Ribosome small subunit-dependent GTPase A n=1 Ta... 157 6e-37 UniRef50_A6GEV4 Ribosome-associated GTPase n=2 Tax=Deltaproteoba... 156 1e-36 UniRef50_C9LLK1 Ribosome small subunit-dependent GTPase A n=1 Ta... 155 2e-36 UniRef50_D1YX46 Probable GTPase EngC n=2 Tax=Euryarchaeota RepID... 155 3e-36 UniRef50_B6YS07 Putative ribosome biogenesis GTPase rsgA n=16 Ta... 154 4e-36 UniRef50_Q3AC25 Putative ribosome biogenesis GTPase rsgA n=9 Tax... 154 4e-36 UniRef50_Q71YJ7 Putative ribosome biogenesis GTPase rsgA 1 n=23 ... 153 7e-36 UniRef50_B8I262 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 152 1e-35 UniRef50_Q03FX9 Putative ribosome biogenesis GTPase rsgA n=25 Ta... 152 2e-35 UniRef50_Q67PQ4 Putative GTPase n=1 Tax=Symbiobacterium thermoph... 151 3e-35 UniRef50_B2RLV5 Putative ribosome biogenesis GTPase rsgA n=28 Ta... 151 4e-35 UniRef50_B9ZJR5 Ribosome small subunit-dependent GTPase A n=1 Ta... 151 4e-35 UniRef50_B0NH56 Putative uncharacterized protein n=1 Tax=Clostri... 150 8e-35 UniRef50_B0VIG3 Putative GTPase YjeQ n=1 Tax=Candidatus Cloacamo... 150 1e-34 UniRef50_B0MPP3 Putative uncharacterized protein n=1 Tax=Eubacte... 149 1e-34 UniRef50_A6TRW0 Putative ribosome biogenesis GTPase rsgA n=15 Ta... 149 1e-34 UniRef50_A3CQN2 GTPase, putative n=3 Tax=Streptococcus RepID=A3C... 149 1e-34 UniRef50_Q2S3I5 Ribosome small subunit-dependent GTPase A n=2 Ta... 147 4e-34 UniRef50_C3J9M6 Ribosome small subunit-dependent GTPase A n=3 Ta... 147 5e-34 UniRef50_Q5HPX0 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 146 9e-34 UniRef50_A6DJW3 Ribosome-associated GTPase n=1 Tax=Lentisphaera ... 146 9e-34 UniRef50_Q8TKG2 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 145 2e-33 UniRef50_Q8R9T7 Putative ribosome biogenesis GTPase rsgA n=16 Ta... 145 2e-33 UniRef50_C4V0Q2 Ribosome-associated GTP-binding protein n=1 Tax=... 145 2e-33 UniRef50_Q1K3F8 GTPase EngC n=1 Tax=Desulfuromonas acetoxidans D... 145 2e-33 UniRef50_A9KMS1 Ribosome small subunit-dependent GTPase A n=4 Ta... 145 3e-33 UniRef50_B3EBY9 Ribosome small subunit-dependent GTPase A n=1 Ta... 144 4e-33 UniRef50_Q82LC4 Putative ribosome biogenesis GTPase rsgA n=23 Ta... 144 5e-33 UniRef50_C9KJ38 Ribosome small subunit-dependent GTPase A n=1 Ta... 144 5e-33 UniRef50_B3QWC8 Ribosome small subunit-dependent GTPase A n=1 Ta... 144 6e-33 UniRef50_Q0AXM1 GTPase EngC n=1 Tax=Syntrophomonas wolfei subsp.... 143 9e-33 UniRef50_B1KX53 Putative ribosome biogenesis GTPase rsgA n=32 Ta... 143 1e-32 UniRef50_A8SM04 Putative uncharacterized protein n=1 Tax=Parvimo... 142 1e-32 UniRef50_D2RNU7 Ribosome small subunit-dependent GTPase A n=2 Ta... 142 1e-32 UniRef50_C5CSN3 Putative ribosome biogenesis GTPase rsgA n=29 Ta... 142 2e-32 UniRef50_B8CWT4 Ribosome small subunit-dependent GTPase A n=1 Ta... 142 2e-32 UniRef50_A1AQR2 Ribosome small subunit-dependent GTPase A n=4 Ta... 142 2e-32 UniRef50_C8NZ87 Ribosome small subunit-dependent GTPase A n=4 Ta... 142 3e-32 UniRef50_Q07I14 Ribosome small subunit-dependent GTPase A n=8 Ta... 141 3e-32 UniRef50_Q39XI8 GTPase EngC n=2 Tax=Geobacter RepID=Q39XI8_GEOMG 141 3e-32 UniRef50_Q6GHL4 Putative ribosome biogenesis GTPase rsgA n=58 Ta... 141 3e-32 UniRef50_Q038H7 Predicted GTPase n=8 Tax=Lactobacillus RepID=Q03... 140 6e-32 UniRef50_C2HH17 GTP-binding protein n=2 Tax=Finegoldia magna Rep... 140 6e-32 UniRef50_A3I6Q8 Ribosome-associated GTPase n=1 Tax=Bacillus sp. ... 140 7e-32 UniRef50_B4RG68 Ribosome-associated GTPase n=2 Tax=Caulobacterac... 140 8e-32 UniRef50_B8FYJ7 Ribosome small subunit-dependent GTPase A n=17 T... 140 9e-32 UniRef50_B0K1Y6 Ribosome small subunit-dependent GTPase A n=14 T... 139 1e-31 UniRef50_C4FT82 Putative uncharacterized protein n=1 Tax=Catonel... 139 1e-31 UniRef50_B1ZUH7 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 139 1e-31 UniRef50_Q2SSL6 Ribosome small subunit-dependent GTPase A n=4 Ta... 139 2e-31 UniRef50_B3PN77 GTPase YjeQ/EngC n=1 Tax=Mycoplasma arthritidis ... 139 2e-31 UniRef50_A6GTD7 Ribosome small subunit-dependent GTPase A n=1 Ta... 139 2e-31 UniRef50_Q2JW76 Ribosome small subunit-dependent GTPase A n=2 Ta... 138 3e-31 UniRef50_B8CXT2 Ribosome small subunit-dependent GTPase A n=2 Ta... 138 3e-31 UniRef50_A8LW34 Ribosome small subunit-dependent GTPase A n=3 Ta... 137 5e-31 UniRef50_Q88WF3 Putative ribosome biogenesis GTPase rsgA 2 n=3 T... 137 6e-31 UniRef50_Q73MQ9 GTPase YjeQ n=1 Tax=Treponema denticola RepID=Q7... 137 6e-31 UniRef50_D2S5Q8 Ribosome small subunit-dependent GTPase A n=1 Ta... 137 6e-31 UniRef50_A4XL75 Ribosome small subunit-dependent GTPase A n=2 Ta... 137 8e-31 UniRef50_C4ZEV1 Putative ribosome biogenesis GTPase rsgA n=12 Ta... 136 1e-30 UniRef50_Q04XB7 GTPase n=6 Tax=Leptospira RepID=Q04XB7_LEPBL 136 1e-30 UniRef50_C6BVN5 Ribosome small subunit-dependent GTPase A n=2 Ta... 136 1e-30 UniRef50_Q02DD4 Ribosome small subunit-dependent GTPase A n=1 Ta... 135 2e-30 UniRef50_C5C2S6 GTPase EngC n=1 Tax=Beutenbergia cavernae DSM 12... 135 2e-30 UniRef50_D1J8S7 Probable GTPase engC n=1 Tax=Mycoplasma hominis ... 135 2e-30 UniRef50_C6D8C7 Ribosome small subunit-dependent GTPase A n=2 Ta... 135 2e-30 UniRef50_B5RLH3 Putative ribosome biogenesis GTPase rsgA n=22 Ta... 135 3e-30 UniRef50_Q08XU7 Ribosome small subunit-dependent GTPase A n=2 Ta... 134 3e-30 UniRef50_C0A6W9 Ribosome small subunit-dependent GTPase A n=1 Ta... 134 4e-30 UniRef50_C8WW82 Ribosome small subunit-dependent GTPase A n=2 Ta... 134 5e-30 UniRef50_D1VSD9 Ribosome small subunit-dependent GTPase A n=1 Ta... 134 5e-30 UniRef50_D1ALR3 Ribosome small subunit-dependent GTPase A n=10 T... 134 7e-30 UniRef50_B2GD51 Putative ribosome biogenesis GTPase rsgA n=57 Ta... 134 7e-30 UniRef50_Q14LR6 Conserved hypothetical duf258 gtpase protein n=1... 133 8e-30 UniRef50_D0J0X0 Ribosome small subunit-dependent GTPase A n=10 T... 133 9e-30 UniRef50_C5BLQ5 Putative GTPase EngC protein 2 n=1 Tax=Teredinib... 133 1e-29 UniRef50_B2UNU0 GTPase EngC n=3 Tax=Verrucomicrobiales RepID=B2U... 132 1e-29 UniRef50_Q044G6 Putative ribosome biogenesis GTPase rsgA n=27 Ta... 132 2e-29 UniRef50_B1C5S8 Putative uncharacterized protein n=1 Tax=Anaerof... 132 2e-29 UniRef50_Q8A8H7 Putative ribosome biogenesis GTPase rsgA 1 n=9 T... 132 3e-29 UniRef50_D1AJL1 Ribosome small subunit-dependent GTPase A n=2 Ta... 131 3e-29 UniRef50_D2NNY6 Predicted GTPase n=2 Tax=Rothia mucilaginosa Rep... 131 3e-29 UniRef50_Q8ETB7 Putative ribosome biogenesis GTPase rsgA 1 n=1 T... 131 4e-29 UniRef50_C7IKW3 Ribosome small subunit-dependent GTPase A n=1 Ta... 131 4e-29 UniRef50_UPI0001698EA9 ribosome-associated GTPase n=1 Tax=Endori... 130 6e-29 UniRef50_C0VZX3 Possible GTP-binding protein n=1 Tax=Actinomyces... 130 6e-29 UniRef50_C6PE63 Ribosome small subunit-dependent GTPase A n=1 Ta... 130 9e-29 UniRef50_C7RGU6 Ribosome small subunit-dependent GTPase A n=4 Ta... 130 9e-29 UniRef50_Q729X9 GTP-binding protein, putative n=4 Tax=Desulfovib... 130 1e-28 UniRef50_B5JHE4 Putative uncharacterized protein n=1 Tax=Verruco... 129 1e-28 UniRef50_C5NY56 Ribosome small subunit-dependent GTPase A n=1 Ta... 129 2e-28 UniRef50_B0SZL3 Ribosome small subunit-dependent GTPase A n=1 Ta... 129 2e-28 UniRef50_D2MQI0 Ribosome small subunit-dependent GTPase A n=1 Ta... 128 2e-28 UniRef50_Q6ANG3 Putative uncharacterized protein n=1 Tax=Desulfo... 128 3e-28 UniRef50_Q65LI5 GTP-binding protein n=1 Tax=Bacillus licheniform... 128 4e-28 UniRef50_Q8EZ61 Putative ribosome biogenesis GTPase rsgA n=3 Tax... 127 7e-28 UniRef50_Q7MGA2 Putative ribosome biogenesis GTPase rsgA 2 n=38 ... 127 8e-28 UniRef50_C1CZT1 Putative GTPase engC protein 2 n=1 Tax=Deinococc... 126 1e-27 UniRef50_C8WGD6 GTPase EngC n=1 Tax=Eggerthella lenta DSM 2243 R... 126 1e-27 UniRef50_UPI0001789FEF GTPase EngC n=1 Tax=Geobacillus sp. Y412M... 126 1e-27 UniRef50_A9EN60 Putative uncharacterized protein n=1 Tax=Sorangi... 126 1e-27 UniRef50_B6W6J9 Putative uncharacterized protein n=1 Tax=Anaeroc... 126 1e-27 UniRef50_Q6KH84 Predicted GTPase protein n=1 Tax=Mycoplasma mobi... 126 1e-27 UniRef50_A6GEY2 Probable GTPase n=1 Tax=Plesiocystis pacifica SI... 125 2e-27 UniRef50_A8RUS7 Putative uncharacterized protein n=2 Tax=Clostri... 125 2e-27 UniRef50_C7H5I2 Ribosome small subunit-dependent GTPase A n=8 Ta... 125 2e-27 UniRef50_C6XMF8 GTPase EngC n=16 Tax=Alphaproteobacteria RepID=C... 125 2e-27 UniRef50_Q7NDG7 Glr4268 protein n=1 Tax=Gloeobacter violaceus Re... 125 2e-27 UniRef50_A6WF06 GTPase EngC n=8 Tax=Actinomycetales RepID=A6WF06... 125 2e-27 UniRef50_Q3A0G9 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 125 2e-27 UniRef50_A4ASQ1 Ribosome-associated GTPase n=1 Tax=Flavobacteria... 125 3e-27 UniRef50_C6W757 Ribosome small subunit-dependent GTPase A n=1 Ta... 125 3e-27 UniRef50_A6W235 GTPase EngC n=2 Tax=cellular organisms RepID=A6W... 125 3e-27 UniRef50_C6BWU3 GTPase EngC n=1 Tax=Desulfovibrio salexigens DSM... 124 3e-27 UniRef50_Q1WUA8 GTPase n=2 Tax=Lactobacillus salivarius RepID=Q1... 124 3e-27 UniRef50_Q03RY0 Predicted GTPase n=1 Tax=Lactobacillus brevis AT... 124 4e-27 UniRef50_A8MGJ8 GTPase EngC n=6 Tax=Bacteria RepID=A8MGJ8_ALKOO 124 5e-27 UniRef50_B8DLQ8 GTPase EngC n=1 Tax=Desulfovibrio vulgaris str. ... 124 6e-27 UniRef50_A5IY02 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 124 6e-27 UniRef50_B4UM25 Ribosome small subunit-dependent GTPase A n=4 Ta... 124 6e-27 UniRef50_A4S3D3 Predicted protein n=3 Tax=Mamiellales RepID=A4S3... 124 7e-27 UniRef50_Q71ZZ0 Putative ribosome biogenesis GTPase rsgA 2 n=21 ... 123 8e-27 UniRef50_C7NDT0 Ribosome small subunit-dependent GTPase A n=2 Ta... 123 9e-27 UniRef50_D1BG37 Predicted GTPase n=1 Tax=Sanguibacter keddieii D... 123 1e-26 UniRef50_C4L300 Ribosome small subunit-dependent GTPase A n=1 Ta... 123 1e-26 UniRef50_C8ZYN3 Ribosome-associated GTPase n=4 Tax=Enterococcus ... 123 1e-26 UniRef50_Q6MJR6 Putative GTPase n=1 Tax=Bdellovibrio bacteriovor... 122 2e-26 UniRef50_D1V939 GTPase EngC n=1 Tax=Frankia sp. EuI1c RepID=D1V9... 122 3e-26 UniRef50_Q8R685 Putative ribosome biogenesis GTPase rsgA n=15 Ta... 121 3e-26 UniRef50_A0JYB3 GTPase EngC n=8 Tax=Micrococcineae RepID=A0JYB3_... 121 5e-26 UniRef50_Q8YUA3 Putative ribosome biogenesis GTPase rsgA 1 n=19 ... 121 5e-26 UniRef50_C7QYQ8 GTPase EngC n=1 Tax=Jonesia denitrificans DSM 20... 120 6e-26 UniRef50_B8FMP2 GTPase EngC n=1 Tax=Desulfatibacillum alkenivora... 120 8e-26 UniRef50_D0LXL5 GTPase EngC n=1 Tax=Haliangium ochraceum DSM 143... 120 8e-26 UniRef50_Q28KH3 GTPase EngC n=5 Tax=Rhodobacteraceae RepID=Q28KH... 120 8e-26 UniRef50_C8PML9 Ribosome small subunit-dependent GTPase A n=1 Ta... 119 1e-25 UniRef50_Q8YK41 Putative ribosome biogenesis GTPase rsgA 2 n=3 T... 119 2e-25 UniRef50_D2UC76 Probable gtpase engc protein n=1 Tax=Xanthomonas... 119 2e-25 UniRef50_Q0F2Y7 GTP-binding protein, putative n=1 Tax=Mariprofun... 118 3e-25 UniRef50_Q2BLA6 GTPase n=1 Tax=Neptuniibacter caesariensis RepID... 118 3e-25 UniRef50_A1ZFA4 Ribosome small subunit-dependent GTPase A n=1 Ta... 118 3e-25 UniRef50_C0R0A9 Ribosome-associated GTPase n=2 Tax=Brachyspira R... 118 4e-25 UniRef50_A1R8G6 Ribosome small subunit-dependent GTPase A n=3 Ta... 117 6e-25 UniRef50_B1AIK5 Putative ribosome biogenesis GTPase rsgA n=15 Ta... 117 7e-25 UniRef50_A6CYS2 Ribosome-associated GTPase n=2 Tax=Vibrionaceae ... 117 8e-25 UniRef50_Q601H2 Putative ribosome biogenesis GTPase rsgA n=4 Tax... 117 8e-25 UniRef50_B1YJQ5 Ribosome small subunit-dependent GTPase A n=67 T... 117 9e-25 UniRef50_B0JW21 Putative ribosome biogenesis GTPase rsgA n=8 Tax... 116 1e-24 UniRef50_B2SLQ8 Putative ribosome biogenesis GTPase rsgA n=19 Ta... 115 2e-24 UniRef50_C7MLK1 Predicted GTPase n=4 Tax=Coriobacteriaceae RepID... 115 3e-24 UniRef50_Q8EUL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 114 4e-24 UniRef50_A4XB51 GTPase EngC n=105 Tax=Bacteria RepID=A4XB51_SALTO 114 4e-24 UniRef50_C4FBQ3 Putative uncharacterized protein n=2 Tax=Collins... 114 4e-24 UniRef50_Q4A6T0 Putative ATP/GTP-binding protein n=1 Tax=Mycopla... 114 6e-24 UniRef50_B2A2K9 Ribosome small subunit-dependent GTPase A n=1 Ta... 114 7e-24 UniRef50_A2BNE5 Predicted GTPases n=7 Tax=Prochlorococcus marinu... 114 7e-24 UniRef50_Q7VEJ4 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 113 1e-23 UniRef50_D2AX52 Ribosome-associated GTPase n=3 Tax=Actinomycetal... 113 1e-23 UniRef50_C4DFS4 Predicted GTPase n=2 Tax=Actinomycetales RepID=C... 112 2e-23 UniRef50_B9NLX8 Ribosome small subunit-dependent GTPase A n=2 Ta... 112 2e-23 UniRef50_B9HDG9 Predicted protein (Fragment) n=1 Tax=Populus tri... 112 2e-23 UniRef50_A3V5J3 Putative uncharacterized protein n=1 Tax=Loktane... 112 3e-23 UniRef50_D2B3W4 Ribosome-associated GTPase n=1 Tax=Streptosporan... 111 3e-23 UniRef50_B5Y7I4 Ribosome small subunit-dependent GTPase A n=1 Ta... 111 4e-23 UniRef50_Q30WI2 GTPase n=2 Tax=Deltaproteobacteria RepID=Q30WI2_... 111 5e-23 UniRef50_D2NSB1 Predicted GTPase n=5 Tax=Actinomycetales RepID=D... 110 6e-23 UniRef50_A4E9Q8 Putative uncharacterized protein n=2 Tax=Collins... 110 6e-23 UniRef50_A4XCG5 GTPase EngC n=1 Tax=Salinispora tropica CNB-440 ... 110 6e-23 UniRef50_B1V9R1 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 110 7e-23 UniRef50_Q2FKR3 GTPase EngC n=1 Tax=Methanospirillum hungatei JF... 110 9e-23 UniRef50_A7BSI5 GTPase EngC n=1 Tax=Beggiatoa sp. PS RepID=A7BSI... 110 1e-22 UniRef50_A0L4L3 GTPase EngC n=1 Tax=Magnetococcus sp. MC-1 RepID... 108 2e-22 UniRef50_B8HA01 GTPase EngC n=1 Tax=Arthrobacter chlorophenolicu... 108 3e-22 UniRef50_Q73J49 GTPase YjeQ, putative n=1 Tax=Treponema denticol... 108 4e-22 UniRef50_C8W7M5 GTPase EngC n=1 Tax=Atopobium parvulum DSM 20469... 108 4e-22 UniRef50_Q98PN8 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 108 4e-22 UniRef50_C1YSI8 Predicted GTPase n=1 Tax=Nocardiopsis dassonvill... 107 5e-22 UniRef50_D0LVG1 Ribosome small subunit-dependent GTPase A n=1 Ta... 107 5e-22 UniRef50_Q46I43 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 107 7e-22 UniRef50_Q114R1 Ribosome small subunit-dependent GTPase A n=2 Ta... 105 2e-21 UniRef50_Q98JM4 Putative ribosome biogenesis GTPase rsgA n=14 Ta... 105 4e-21 UniRef50_B9RMG0 GTP binding protein, putative n=1 Tax=Ricinus co... 104 5e-21 UniRef50_P59945 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 104 5e-21 UniRef50_UPI0001C31887 GTPase EngC n=1 Tax=Conexibacter woesei D... 101 3e-20 UniRef50_A2C5M0 Putative ribosome biogenesis GTPase rsgA n=14 Ta... 100 7e-20 UniRef50_A5CQK8 Putative GTPase n=4 Tax=Actinobacteria (class) R... 100 8e-20 UniRef50_A8IGD6 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 100 1e-19 >UniRef50_A6TH78 Putative ribosome biogenesis GTPase rsgA n=304 Tax=Proteobacteria RepID=RSGA_KLEP7 Length = 353 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/353 (88%), Positives = 328/353 (92%), Gaps = 3/353 (0%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MSKNKLSKGQQRRV ANHQRRLKT+ EK DYDDNLFGE EGIVISRFGMHADVESADG Sbjct: 1 MSKNKLSKGQQRRVKANHQRRLKTTAEKADYDDNLFGETSEGIVISRFGMHADVESADGS 60 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 VHRCNIRRTIRSLVTGDRVVWRPGK AA+GV+VKGIVEAVH+R SVLTRPDFYDGVKPIA Sbjct: 61 VHRCNIRRTIRSLVTGDRVVWRPGKDAADGVSVKGIVEAVHDRASVLTRPDFYDGVKPIA 120 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANIDQIV+VSAILPELSLNIIDRYLVACE IEP+IVLNKIDLLDD+G+ FVNEQMDIY Sbjct: 121 ANIDQIVVVSAILPELSLNIIDRYLVACEAQDIEPLIVLNKIDLLDDDGLRFVNEQMDIY 180 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGL-QKEILTNDI 239 RNIGYRVL+VSS TQDGLKPLE ALT RISIFAGQSGVGKSSLLNALLGL + +ILTND+ Sbjct: 181 RNIGYRVLLVSSRTQDGLKPLEAALTDRISIFAGQSGVGKSSLLNALLGLSEDQILTNDV 240 Query: 240 SDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKY 299 SD SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE EQIT GFVEFHDYLG CKY Sbjct: 241 SDVSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEAEQITNGFVEFHDYLGRCKY 300 Query: 300 RDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA--QVKTRKNFSDTDD 350 RDCKHDTDPGCA+REAVE GKIAE+RFENYHRILESMA QVKTRKNFS +DD Sbjct: 301 RDCKHDTDPGCALREAVENGKIAESRFENYHRILESMAQVQVKTRKNFSSSDD 353 >UniRef50_C9PQI0 Putative uncharacterized protein n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PQI0_9PAST Length = 354 Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust. Identities = 188/350 (53%), Positives = 262/350 (74%), Gaps = 7/350 (2%) Query: 1 MSKNKLSKGQQRRVNANHQRRL----KTSKEKPDYDDNLFGEPDEGIVISRFGMHADVES 56 +SK KL++ Q+RR+ +N+++ L + K++ ++ D++ GE +GIV++R+ +HADVE+ Sbjct: 6 LSKRKLTQNQKRRIQSNNEKALHRHQRREKKEIEWQDDMLGESQDGIVVTRYSVHADVEN 65 Query: 57 ADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV 116 A G++ RCN+RRT+ SLV GDRVVWR G +GV+ G++EA+ R + +TRPD+YDG+ Sbjct: 66 AQGEIFRCNLRRTLSSLVVGDRVVWRQGNQQLQGVS--GVIEAIKPRQNEITRPDYYDGL 123 Query: 117 KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 K IAANID+I+IVSA+LP LSLNIIDRYLV CET I +IV+NK+DLL DE V EQ Sbjct: 124 KVIAANIDRIIIVSAVLPTLSLNIIDRYLVICETANIPAVIVVNKVDLLTDEARKEVEEQ 183 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 + IY IGY+ +M+S+ + + ++ L SI GQSGVGKSSL+N +L + Sbjct: 184 LKIYEKIGYQTMMISAMSGENMEKLTALFNNSTSILVGQSGVGKSSLINHILP-EVNAHV 242 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 DIS+NSGLGQHTTT++RLYH GG++IDSPG+REFGLWHLE +QIT+G+ EF +LG Sbjct: 243 GDISENSGLGQHTTTSSRLYHLNQGGNLIDSPGIREFGLWHLEQDQITKGYREFQYFLGT 302 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 CK+RDCKH DPGCA+REAVE+GKI RF+NYHR++ S+ + K+++ FS Sbjct: 303 CKFRDCKHLNDPGCALREAVEQGKIHSVRFDNYHRLIASLNETKSQRYFS 352 >UniRef50_A8FRC7 Ribosome small subunit-dependent GTPase A n=9 Tax=Gammaproteobacteria RepID=A8FRC7_SHESH Length = 352 Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/354 (53%), Positives = 246/354 (69%), Gaps = 7/354 (1%) Query: 1 MSKNK-LSKGQQRRVNANHQRRLK---TSKEKPDYDDNLFGEPDEGIVISRFGMHADVES 56 MSK K LS+GQ+RR+ AN ++RL+ + + D+ G G VISRFG HAD+E+ Sbjct: 1 MSKKKPLSQGQRRRMRANQEKRLQRKDSGSNASELQDSSLGPEQLGTVISRFGQHADIET 60 Query: 57 ADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV 116 G + RCNIRR I+SLVTGD+VV R K G+ G+VEAVH R S L+RPD YDG+ Sbjct: 61 ESGQLARCNIRRNIQSLVTGDKVVARLAKDIETGI--AGVVEAVHPRHSSLSRPDMYDGI 118 Query: 117 KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 K IAANIDQI+IVS+++P + IIDRYLVA E I PII+LNKIDLL DE V Sbjct: 119 KIIAANIDQILIVSSVVPSFTTQIIDRYLVAAEDTGISPIIILNKIDLLTDEERPEVEAA 178 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 ++ YR+IGY V VSS + G++ +++ L +S+F GQSGVGKSSL+NA++ E+ Sbjct: 179 LERYRDIGYPVYQVSSKSGLGVEGIKDLLNENVSVFVGQSGVGKSSLINAMMP-DAELQI 237 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 D+S+NSGLGQHTTT A+L HF GGD++DSPGVREF LWHL E++ F+EF DYLG Sbjct: 238 GDVSENSGLGQHTTTTAKLLHFASGGDLVDSPGVREFALWHLPAERVGWCFIEFRDYLGT 297 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 CK+RDCKH DPGCAI A +GKIAE R+ NYH+I+ S+ + + ++F D Sbjct: 298 CKFRDCKHKNDPGCAITAAFNDGKIAEDRYNNYHKIIASLDEQRHARHFRSGSD 351 >UniRef50_Q0VMD9 Putative ribosome biogenesis GTPase rsgA n=40 Tax=Bacteria RepID=RSGA_ALCBS Length = 352 Score = 304 bits (779), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 151/346 (43%), Positives = 221/346 (63%), Gaps = 16/346 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNL----FGEPDEGIVISRFGMHADVES 56 M+K KL++ Q+ R+ + + + D + L G+ G++ + FG +VES Sbjct: 1 MAKRKLNRRQRWRIEKIQAEKRDRANRRTDQQEILVADDLGDEQHGVITAHFGQQVEVES 60 Query: 57 ADG------DVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP 110 ADG RC+ R T+ LV GD+V+W+P P +EG+ G+V A+ R +VL RP Sbjct: 61 ADGPGAENRTTRRCHFRATLEQLVVGDKVIWQP--PKSEGL---GVVVAIEPRDTVLKRP 115 Query: 111 DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGM 170 D Y +KP+AAN++Q+++V A LP S +++DRYLVA E I +VLNK DL+DD Sbjct: 116 DMYGNLKPVAANVEQMLVVFAPLPTPSSSLLDRYLVAAELSGIAATLVLNKADLIDDTLR 175 Query: 171 AFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGL 230 FV+E D+YR++GY VL V +H ++GL PL EAL G+ S+F GQSGVGKSSL+N +L Sbjct: 176 PFVDELSDMYRHLGYPVLEVCAHQREGLTPLHEALAGKTSVFVGQSGVGKSSLINGVLP- 234 Query: 231 QKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEF 290 + ++ ++S NSGLGQHTT ARL H P GG +IDSPG+REFGLWH+ + + G+ E Sbjct: 235 EADLQVGELSSNSGLGQHTTVTARLVHLPTGGQLIDSPGIREFGLWHIGEDDLLHGYREL 294 Query: 291 HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + G CK+R+C H +PGCA+ A + G I E R N+++I +++ Sbjct: 295 SELAGYCKFRNCSHRNEPGCALILAAQNGDIDEERLANFYQISDTL 340 >UniRef50_C5BRI8 Ribosome small subunit-dependent GTPase A n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRI8_TERTT Length = 328 Score = 290 bits (742), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 153/342 (44%), Positives = 214/342 (62%), Gaps = 17/342 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 M+K KL++ Q RR+ A Q+ L+ + E +N+ G+VISR+G ADVE+A G+ Sbjct: 1 MAKRKLTQQQSRRI-AKQQKALRQTTEL----ENVL----PGLVISRYGKQADVETASGE 51 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 ++RC++RR + LVTGDRV + A ++ +V + L RPD Y +K I Sbjct: 52 LYRCHLRRNLGDLVTGDRVALQLEDEGA-------VIVSVEPAKNRLQRPDSYGKLKAIG 104 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANIDQ+VIV A PE N+IDRYLV E L ++P++++NK DL+ + E +Y Sbjct: 105 ANIDQMVIVIAPQPEAHPNLIDRYLVVAENLDVQPLLLVNKSDLIAPSSHETLTEIAQLY 164 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 ++ Y +L VS+ G+ LE L R SIF GQSGVGKSSLL LL +++ D+S Sbjct: 165 SSLHYPILHVSAKADMGMAALEAQLANRTSIFVGQSGVGKSSLLQNLLP-GEDLKIGDLS 223 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 + G G+HTTT ARLYHF GG+ IDSPG+REFGLWH + Q+ GFVE Y G CK+ Sbjct: 224 EQVGKGKHTTTYARLYHFSSGGNCIDSPGIREFGLWHFDKTQLLNGFVELRQYGGSCKFS 283 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 DC H+ DPGCAIREAV+ G+I R+E++ RI ++ V+ + Sbjct: 284 DCSHNNDPGCAIREAVDAGEIQPQRYESFLRIAATLDDVQVK 325 >UniRef50_Q21H92 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Gammaproteobacteria RepID=RSGA_SACD2 Length = 343 Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 150/349 (42%), Positives = 207/349 (59%), Gaps = 20/349 (5%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 M+K +LSK Q R+ +RL TS PD G G+VI+ G VE+ D Sbjct: 1 MAKRRLSKRQVDRIRERQSQRLDTSVAAPD--GKQLGSEQAGLVIAHHGKQVQVETLDNS 58 Query: 61 VH-----RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG 115 RC++R T+ S+VTGDR+V++ + GI+ A+ R+S L RPD Y Sbjct: 59 DDSPRRLRCHLRATLGSVVTGDRIVFQED-------DSSGIIVAIQPRSSTLVRPDSYGK 111 Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLL--DDEGMAFV 173 +KP+AAN+DQ++I A PE +IDRYL E L I P+++ NK+DLL D+ A Sbjct: 112 LKPVAANVDQLLITIACAPEPFSGLIDRYLAVAENLHIRPVLLFNKLDLLQSDEIDSAIA 171 Query: 174 NEQMDI---YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGL 230 N+ + Y ++GYR + + DGL L L S+F GQSGVGKSS++ LL Sbjct: 172 NKVAKLRTLYTSLGYRCIDTCAKNGDGLDELRNTLQDNTSVFVGQSGVGKSSIIKKLLPD 231 Query: 231 QKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEF 290 Q EI +SD G+HTTT + L+HFP GGD IDSPG+REFGLWHL P+++T GF+E Sbjct: 232 Q-EIAIGALSDAIDKGRHTTTHSELFHFPFGGDCIDSPGIREFGLWHLSPKEVTYGFIEI 290 Query: 291 HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 D GLCK+RDC H +P CA+ AVE+G + R+EN+ RI++S+ V Sbjct: 291 RDIAGLCKFRDCSHTHEPSCAVLNAVEDGSLHPERYENFQRIVQSLDDV 339 >UniRef50_Q5ZRX8 EngC GTPase n=6 Tax=Legionella RepID=Q5ZRX8_LEGPH Length = 325 Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 139/331 (41%), Positives = 201/331 (60%), Gaps = 10/331 (3%) Query: 11 QRRVNANHQRRL-KTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRT 69 +RR+N R+ K K +Y N +G+VI+RF HA++E G C+IR Sbjct: 3 KRRINKQQSARIAKIQKNYHEYMGNNSDNLADGLVITRFSRHAEIEDNQGKRILCSIRPN 62 Query: 70 IRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV 129 + +LV GDRV+W+ EG +G+V +++ R S+L RP +P+AANI Q+V+V Sbjct: 63 LDTLVAGDRVIWQ-----IEG-EKQGVVVSIYPRGSLLARPSQKGLKRPVAANITQLVVV 116 Query: 130 SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLM 189 A PE+S ++D YL+ E LQ+ +IVLNKIDL M Y+ + Y V+M Sbjct: 117 IAPKPEISWPLLDSYLIMAEILQVHVVIVLNKIDL---PCQTLQQRLMMDYQLLNYPVIM 173 Query: 190 VSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 S+ T D + PL++AL +IS+F GQSGVGKSSL+++LL ++ I + IS S LG+HT Sbjct: 174 ASNQTPDTIVPLKQALNNQISVFVGQSGVGKSSLISSLLPHEENIAIDKISMVSELGKHT 233 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG 309 T +R YH P GG +IDSPGVREF LW ++ I QG+ EF YL CK+R+C H P Sbjct: 234 TRNSRYYHLPSGGALIDSPGVREFSLWDIDCSMIAQGYKEFKPYLSQCKFRNCTHINTPQ 293 Query: 310 CAIREAVEEGKIAETRFENYHRILESMAQVK 340 CAI +A+ +GKI+ R+EN+ ++ +K Sbjct: 294 CAIIDALNKGKISTQRYENFTKLCAQFNSLK 324 >UniRef50_B7H060 Ribosome small subunit-dependent GTPase A n=17 Tax=Acinetobacter RepID=B7H060_ACIB3 Length = 352 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 146/367 (39%), Positives = 214/367 (58%), Gaps = 44/367 (11%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVES---- 56 + K +L++ QQRR+ H KT +E+ D +L +G+V+ +G +V++ Sbjct: 4 IRKRRLTEQQQRRIEKQH----KTRQEEVDTSQDL-----DGLVVQHYGRQLEVQALSVP 54 Query: 57 ---------ADGD------------VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 A+G+ V RC+ R + LVTGDRV W+ A+ G Sbjct: 55 DHHPEKPQVAEGEPEPFWKPIELNSVWRCHTRTNLELLVTGDRVKWQ-----ADPNTGLG 109 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 I+ A+H RTS+LTRPD Y VKP+AANI IVIV A LPE + +IDRYLVAC I Sbjct: 110 IITAIHPRTSLLTRPDRYHKVKPVAANISLIVIVFAPLPEPAPTLIDRYLVACADANIPA 169 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++VLNK DLL + + + Y N+GY V++ H++ + L + L G F GQ Sbjct: 170 LLVLNKSDLLTENDPIL--DMLKEYENLGYEVMIC--HSKGDISALSQRLDGETVAFVGQ 225 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSL+N L+ E TN IS+NS LGQHTTT+ RL +F G +IDSPG+REFGL Sbjct: 226 SGVGKSSLINVLIP-DAEQKTNIISENSALGQHTTTSTRLINFGKNGALIDSPGIREFGL 284 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 WHL+ ++I GF E +LG C++R+C H + C +++AVE G+I R +++ R+++ Sbjct: 285 WHLDLDKIRMGFPEIEAHLGSCQFRNCTHTHEKNCGLKQAVEAGEILPRRLDSFLRLIDE 344 Query: 336 MAQVKTR 342 + + + + Sbjct: 345 IQEAQQK 351 >UniRef50_C7R8R7 Sigma 54 interacting domain protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8R7_KANKD Length = 335 Score = 240 bits (612), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 8/315 (2%) Query: 26 KEKPD--YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRP 83 KEK D D+ +P++GIVISRFG D+ + + RC +R++ V GDR +R Sbjct: 24 KEKVDRNIDEESLLDPEQGIVISRFGQQVDIADENFETIRCFLRKSNEVPVVGDRAWFRR 83 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDR 143 K GV V+ + R S+L RP + GVKP+AANID I ++ A P S ++DR Sbjct: 84 QKELPTGVLVE-----LEPRRSLLKRPTPHHGVKPVAANIDLIALLLAPEPAFSEVLLDR 138 Query: 144 YLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEE 203 YLVA ++ ++ I++NK D +D+E + +++ +Y+++GY + +S++T +G++ L Sbjct: 139 YLVAAQSSELPVWIIMNKWDTVDNEEKESIKKRLQLYQDLGYPIYYISANTGEGVEQLVR 198 Query: 204 ALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 LTG+ + AGQSGVGKS+L+ L EI T ++S SGLG HTTTA+RLY Sbjct: 199 NLTGKQLLLAGQSGVGKSTLIGYLFP-NMEIATGEVSGTSGLGTHTTTASRLYRLDAATY 257 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 ++DSPGVREFGLWHLE I QGF+E CK+RDCKH +PGCA+ A ++G IA Sbjct: 258 LVDSPGVREFGLWHLEDHDIKQGFIEISTIGEQCKFRDCKHLNEPGCAVLAAAKDGAIAA 317 Query: 324 TRFENYHRILESMAQ 338 +R +NY +++ Q Sbjct: 318 SRLKNYQHLIQHFDQ 332 >UniRef50_A5WDM1 Ribosome small subunit-dependent GTPase A n=4 Tax=Moraxellaceae RepID=A5WDM1_PSYWF Length = 374 Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 135/374 (36%), Positives = 205/374 (54%), Gaps = 62/374 (16%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESAD-- 58 + + KL+K Q RR++ K++ +++ G +G+V++ +G +V+ Sbjct: 4 IRQRKLTKQQLRRID----------KQQAQQQESIDGSLMDGVVMAHYGKQLEVQVTSLP 53 Query: 59 -----------------------GDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 GD+ RC++R + + TGD+V W A+ G Sbjct: 54 TLIPERPEVVEGEPEPFWQAIELGDIWRCHVRTNLPMIATGDKVRW-----VADPNTGFG 108 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 +E+V RTS+++RPD Y +KP+AAN+D + IV A LP + N+IDRYLV C ++P Sbjct: 109 RIESVQPRTSLISRPDRYHKLKPVAANVDILAIVFAPLPAAAPNLIDRYLVVCHHADVKP 168 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS----------------HTQDGLK 199 ++VLNK DLL E AF +D Y+N+GY ++ ++ Q GL Sbjct: 169 LLVLNKADLLSIEDYAFTQALLDEYQNLGYETVLTAAPCPENILHGAQSEDQPKAQLGLS 228 Query: 200 PLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L++ + ++ IFAGQSGVGKS+L+NALL E N IS NS LGQHTTT +RL F Sbjct: 229 DLQQKIKDKLVIFAGQSGVGKSTLVNALLP-DSEQSVNVISTNSKLGQHTTTTSRLLPFN 287 Query: 260 HG----GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP-GCAIRE 314 G ++D+PG+RE+G+WHL P+ I GF+E C++RDCKH + GCA+ E Sbjct: 288 RDDLTQGGIVDTPGIREYGIWHLTPDDIIAGFIELSALAADCQFRDCKHTYNSKGCALWE 347 Query: 315 AVEEGKIAETRFEN 328 AV EG++ + R E+ Sbjct: 348 AVAEGRVLQRRVES 361 >UniRef50_A0Z0P9 Ribosome-associated GTPase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0P9_9GAMM Length = 318 Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 141/338 (41%), Positives = 197/338 (58%), Gaps = 20/338 (5%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MSK++LSK Q RR+ A +R S+ L GE G+VI+RFG +E +GD Sbjct: 1 MSKSQLSKQQNRRIQAAQERYRSESE--------LGGE--SGLVIARFGKQVLIEEENGD 50 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 +RR V GD+VVW P +G + G++EA+ R ++++RP+ ++PIA Sbjct: 51 RRTTTLRRRAEDPVAGDQVVWTP-----QGEH--GVIEALLPRRTIISRPNSQGALRPIA 103 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANID+++IV A P N+IDRYLVA I+ +++NK DLL + V + + Y Sbjct: 104 ANIDRLLIVIAPQPLAQANLIDRYLVAASHAGIDASLIVNKADLLSE--APSVVQLAETY 161 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 +G V+ + G + L + + + GQSGVGKSSL+ LL EI +S Sbjct: 162 SELGVEVVTTGQLSDPGAETLMDMVATQTVALVGQSGVGKSSLIKRLLP-DLEIRIGALS 220 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 D GLG+HTTTAA LYH P GG +IDSPGVREF L HL + I GFVEF LGLC++R Sbjct: 221 DAVGLGRHTTTAAALYHLPGGGRLIDSPGVREFHLSHLPKDAIESGFVEFEPLLGLCRFR 280 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 DC H + CA+ EA E G+I+ R +Y +I+ SM+Q Sbjct: 281 DCSHSHEVRCAVLEAHERGEISSDRLASYRQIVASMSQ 318 >UniRef50_A0LCF1 Ribosome small subunit-dependent GTPase A n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCF1_MAGSM Length = 346 Score = 230 bits (586), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 125/325 (38%), Positives = 202/325 (62%), Gaps = 13/325 (4%) Query: 18 HQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTI-RSLVTG 76 ++++ K+++ ++D GEP EG+VI+ +G++ V S HRC +R T+ + V G Sbjct: 28 NRKQAKSAEHAAEFDAQGLGEPREGLVIAHYGLNVAVTSEGMAEHRCAVRETLPENPVCG 87 Query: 77 DRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPE 135 DRV+WRPG +N +G++E + R++VL RP Y+ ++ +AAN+D++++ SA L Sbjct: 88 DRVIWRPG------LNEQGVIEDIMPRSNVLRRPGPYNRLQTLAANLDRLLVTTSAAL-- 139 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLL-DDEGMAFVNEQMDIYRNIGYRVLMVSSHT 194 + ++DRYLVA IEP+I++NK+DL+ D+E + + + Y+ + Y ++ VS+ T Sbjct: 140 FNPFLVDRYLVAASAANIEPVIIVNKMDLIRDEESLDDLAMLLAPYQEMEYEIVPVSATT 199 Query: 195 QDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAAR 254 G+ L++ L+ +S F GQSGVGKSSL+ + + D++ ++G G+HTTT A Sbjct: 200 GQGMGELDDILSFGLSAFVGQSGVGKSSLVAHWID-DLSLRIADVNAHTGKGRHTTTVAH 258 Query: 255 LYHFPHG-GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIR 313 LY G G +IDSPGVR FGL +EPE++ F + C + DCKH+ +PGCA+ Sbjct: 259 LYPLKSGRGGIIDSPGVRAFGLHGVEPEEVIHHFRDLAPLAQQCHFNDCKHEQEPGCAVL 318 Query: 314 EAVEEGKIAETRFENYHRILESMAQ 338 EA+E R E+YHRILES+ + Sbjct: 319 EAIEHEIADAIRLESYHRILESILE 343 >UniRef50_Q31HZ7 Ribosome small subunit-dependent GTPase A n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HZ7_THICR Length = 340 Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 122/309 (39%), Positives = 183/309 (59%), Gaps = 13/309 (4%) Query: 36 FGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPG-KPAAEGVNVK 94 GE G+VI+ FG +E DG ++ C R+ + LV GDRV W+ +P Sbjct: 35 LGEKQPGLVITNFGKRLLIEDNDGHIYNCAARQHLGKLVAGDRVTWQTDIEPNT------ 88 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 G+V + RT L+RP F + +AANID + IV+ + P + ++IDRYLVA L + Sbjct: 89 GVVVSAEPRTQELSRPGFRGQKRMVAANIDWLGIVAPVEPGIHPDMIDRYLVAAHQLDLP 148 Query: 155 PIIVLNKIDLLD-DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +I++NKIDL++ DE + E + Y + +L VS+ T +G+ L E L + S+F Sbjct: 149 VLILINKIDLIESDEQWEAIAELLIPYDEMDIEILPVSAETNEGMDELREVLMNKNSVFV 208 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP----HGGDVIDSPG 269 G SG GKSSL+ AL+ EI TN +S+++GLG+HTTT + LYH P G++IDSPG Sbjct: 209 GPSGAGKSSLIKALIP-DIEIKTNQLSESTGLGKHTTTNSILYHLPEFEGQTGNIIDSPG 267 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 VR+F E ++ Q + +F +LG CK+ +C H +P CAI+ AVE G+I TRF+++ Sbjct: 268 VRQFSPAPCELHELEQAYPDFAPFLGQCKFSNCTHTNEPDCAIKHAVETGEIYYTRFQSF 327 Query: 330 HRILESMAQ 338 R+L + Sbjct: 328 QRLLSEFKE 336 >UniRef50_D1KB75 GTPase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KB75_9GAMM Length = 321 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 127/333 (38%), Positives = 186/333 (55%), Gaps = 14/333 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MS + K + ++ A R + + + + GE G+VI+R+G VES GD Sbjct: 1 MSLTRRQKWRIEKIQAERIARAQKASSNSETSLDNAGEEQTGLVITRYGQRLLVESESGD 60 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 +++C R+ I V GD+V+++ +G+V A+ +R + LTR K IA Sbjct: 61 LYQCTGRQNIELSVAGDQVLFQTTDGN------EGVVTALLKRDNSLTRSQ-----KLIA 109 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANID++ +V AI P +IDRYLV E + IV+NKI+L + + V +Y Sbjct: 110 ANIDELWLVVAIEPHYQFELIDRYLVVAENASLPINIVVNKIEL--SKNIDQVKYDFSMY 167 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 + GY V +S Q + + L + IF GQSGVGKSSL+N L+ + N+IS Sbjct: 168 ESAGYNVSYLSVKEQTNVAEFKSQLNDKTHIFLGQSGVGKSSLINELIP-DLNLRVNEIS 226 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 S LG+HTTT LYH P GGD+IDSPG+REF L L ++I GF EF ++G CK+R Sbjct: 227 TKSKLGKHTTTNTTLYHIPSGGDLIDSPGIREFQLDDLTDKEILSGFREFKPFIGQCKFR 286 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 +C H +P CAI+ AVE G+I R+ NY +++ Sbjct: 287 NCAHINEPKCAIKTAVEAGEINPMRYNNYLQLI 319 >UniRef50_C5S7F8 Ribosome small subunit-dependent GTPase A n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7F8_CHRVI Length = 333 Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 139/337 (41%), Positives = 196/337 (58%), Gaps = 11/337 (3%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPD---YDDNLFGEPDEGIVISRFGMHADVESA 57 M+K +LS Q R+ A +RR + +P+ + + EP+EG V+ R G + VE A Sbjct: 1 MAKRRLSARQIERIQAIQERRRERLAARPERALAELDDELEPEEGRVVVRHGANLAVEDA 60 Query: 58 DGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVK 117 G + C R+ I +V GDRVVW+ + +G+V A R S L+RPD+ K Sbjct: 61 HGHLIHCLARQNIGHVVCGDRVVWQ------RLPDGQGVVTATLPRISTLSRPDYSGRDK 114 Query: 118 PIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD-EGMAFVNEQ 176 P+AAN+ ++ I+ A PE S +ID+YLVA E + +E I+V NK+DLL E A + Sbjct: 115 PLAANLTRLAILIAPEPEPSGYLIDQYLVAAELIGVEAILVGNKMDLLAGAEERAAFQTR 174 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 Y IGYR +S + + L L+G+ S+ GQSGVGKSSL+ LL Q EI Sbjct: 175 FAHYGAIGYRTFWISLLEPESIGGLVAELSGQTSVLVGQSGVGKSSLVKLLLPDQ-EIQI 233 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 +S +GLG+HTT+AA Y G +IDSPGVR F L ++ + QGF EF +LG Sbjct: 234 GRLSQATGLGRHTTSAATCYRLSGDGFLIDSPGVRSFRLGDIDRHGLQQGFREFRPHLGR 293 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 C++ DC+HD +P CAIR+AVE+G IA R N+H +L Sbjct: 294 CRFGDCRHDQEPDCAIRQAVEDGLIAPERLANFHHLL 330 >UniRef50_B5JX14 Ribosome small subunit-dependent GTPase A n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX14_9GAMM Length = 303 Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 173/293 (59%), Gaps = 10/293 (3%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVH 101 G VI+ FG H V + G + + + RR + +V GD V++ P A +V+ V Sbjct: 7 GRVIANFGRHLSVRTQAGQLVKASARRKLGLVVCGDHVLFDPSGDEA-------VVQQVQ 59 Query: 102 ERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNK 161 R VL RPD KP+AAN+DQ+ +VSA P + +ID YLV + + +E +++ NK Sbjct: 60 PRHGVLARPDRRGENKPLAANLDQLFVVSAHKPGIDRFLIDSYLVTAKLMGVEAVLLFNK 119 Query: 162 IDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKS 221 DL D + +N + Y ++GYR L S+ + GL+ L + + +I GQSGVGKS Sbjct: 120 DDLEHD--VDALNNTLQYYEDLGYRCLRTSAQSGQGLEKLMDQARDKANILVGQSGVGKS 177 Query: 222 SLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPE 281 SL+ LL I +S++SGLG HTTT LY GG++IDSPGVREF W + + Sbjct: 178 SLIQYLLP-DLSIQVGALSESSGLGSHTTTTTILYQLGDGGELIDSPGVREFATWTQDEQ 236 Query: 282 QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 QI +GF E D C++ +C+H +PGCA+++A+EE + AE R+++Y ++LE Sbjct: 237 QILKGFKEIADLGQYCRFHNCRHLKEPGCAVKQAIEENECAEWRYQHYLKMLE 289 >UniRef50_A1AWN3 Ribosome small subunit-dependent GTPase A n=2 Tax=sulfur-oxidizing symbionts RepID=A1AWN3_RUTMC Length = 318 Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 121/294 (41%), Positives = 176/294 (59%), Gaps = 14/294 (4%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVH 101 G+VI+R+G V++ G++++C RR I + GD+V+++ + +GIV A+ Sbjct: 39 GLVITRYGQRLLVKANSGELYQCTARRNIDLSIAGDQVIFQITQSN------QGIVTALI 92 Query: 102 ERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNK 161 +R + L R K IAANIDQ+ +V+AI P +IDRYLV E ++ IV+NK Sbjct: 93 KRHNQLHRAH-----KLIAANIDQLWLVAAIEPHYQFELIDRYLVVAENAKLPINIVVNK 147 Query: 162 IDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKS 221 IDL D M + +Y NIGY V +S Q + L+ L + +IF GQSGVGKS Sbjct: 148 IDLASD--MKKIKFDFSMYENIGYSVNYLSVKKQININQLKTQLNKKSNIFLGQSGVGKS 205 Query: 222 SLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPE 281 SL+N L+ + N+IS S LG+HTTT LY+ P GGD+IDSPG+REF L L + Sbjct: 206 SLINELIP-NLNLGVNEISAKSKLGKHTTTNTILYNIPSGGDLIDSPGIREFQLDELINQ 264 Query: 282 QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 +I GF EF + CK+R+C H +P CAI+ AV+ GKI + R+++Y ++ S Sbjct: 265 EILNGFKEFKPLINACKFRNCAHIFEPKCAIKLAVKSGKIHQKRYQSYLTLVSS 318 >UniRef50_B8GPJ8 Ribosome-associated GTPase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPJ8_THISH Length = 289 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 123/288 (42%), Positives = 170/288 (59%), Gaps = 8/288 (2%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVH 101 G V++RFG +E G RC RR ++ V GDRV W P + +V A+ Sbjct: 5 GRVVTRFGAELVIEDETGQRRRCTSRRRLQDAVCGDRVEWSPSDSGND------VVSAIL 58 Query: 102 ERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNK 161 R ++L R D +P+AAN+DQ+V+V A P ++DRYLVA E L ++V+NK Sbjct: 59 PRHNLLQRLDPRGQTRPVAANLDQVVVVIARRPPPQWPLVDRYLVAIEHLDARALLVVNK 118 Query: 162 IDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKS 221 DL D + + YR +GY +L S+ GL L L R SI GQSGVGKS Sbjct: 119 ADLEPDPADPQPGME-ERYRQLGYPMLHTSASAGLGLDDLRGELKDRTSILVGQSGVGKS 177 Query: 222 SLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPE 281 SL+ ALL + + ++S+ +G G+HTTTAA LYH P GGD+IDSPGVR+F L E Sbjct: 178 SLIQALLP-GESLRIGEVSEATGEGRHTTTAASLYHLPGGGDLIDSPGVRDFTPPPLPAE 236 Query: 282 QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 + +GFVEF YLG C++ +C HD +PGCAI+ AV+ G+I+ R+ +Y Sbjct: 237 ALARGFVEFRPYLGQCRFHNCNHDREPGCAIKAAVDAGEISGERYRSY 284 >UniRef50_Q0A8I5 Ribosome small subunit-dependent GTPase A n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8I5_ALHEH Length = 334 Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 122/327 (37%), Positives = 181/327 (55%), Gaps = 16/327 (4%) Query: 19 QRRLKTSKEKPDYDDNLFGEP-------DEGIVISRFGMHADVESADGDVHRC-NIRRTI 70 Q R + + +PD++ GEP G V+S G + VE +G ++RC +++R Sbjct: 16 QSRSRRHQPRPDHNHPGDGEPPVSPAAGQTGRVVSHHGRESLVEDREGRLYRCLSLKRVG 75 Query: 71 RSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS 130 R L GD V W P + G+++ +H R V+ R + V+ IAAN+D++V+VS Sbjct: 76 RPLC-GDYVDWHPE------TDETGVIDRIHPRHGVIARTAYNGRVQAIAANVDRMVVVS 128 Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMV 190 A+ P +I+RYLV L +EP++ LNK DL D+ + +R G V+ Sbjct: 129 ALEPPPDPELINRYLVLAHHLAVEPLLWLNKTDLDPDQAERLLASVFAGHRARGVAVMAG 188 Query: 191 SSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTT 250 S HT +G++ L EAL S+ G SGVGKSSL+ ALL +++ D+S SGLG+HTT Sbjct: 189 SPHTGEGMETLREALREGTSVLVGLSGVGKSSLIKALLP-DRDLRIGDLSARSGLGRHTT 247 Query: 251 TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGC 310 T LYH P GGD+IDSPG+R L ++ E + F E C++ +C+H +PGC Sbjct: 248 TETTLYHLPEGGDLIDSPGIRALRLANIPREALQPAFPEIARVASGCRFHNCQHRNEPGC 307 Query: 311 AIREAVEEGKIAETRFENYHRILESMA 337 A+R AVE G+I R H +L+ A Sbjct: 308 AVRAAVERGEIEPGRLATLHHLLDEAA 334 >UniRef50_Q60BE0 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q60BE0_METCA Length = 299 Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 119/293 (40%), Positives = 167/293 (56%), Gaps = 10/293 (3%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAV 100 +G V+ G VE G + C+ RR + GD V W P EG +G V V Sbjct: 6 QGRVVCHLGKGLAVEDETGRIVLCHTRRRLGDAAVGDHVRWEP----CEGD--QGRVLEV 59 Query: 101 HERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN 160 R S L RP V+ +AAN+D++ +V A PE + D+ L CE I ++LN Sbjct: 60 LPRRSSLVRPAHGGRVRVVAANLDRVFVVLAPEPEPDWLLADQILAVCEYRHITAALILN 119 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220 KIDL+ G + + + Y GY V +S+ T GL L L S+ +GQSGVGK Sbjct: 120 KIDLV---GASALERALRDYEAAGYEVFRISTRTGAGLDALRSMLHTGCSMLSGQSGVGK 176 Query: 221 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP 280 SSL NALL + + ++S +SGLG+HTTT+A LY P GG++IDSPGV FGL ++P Sbjct: 177 SSLTNALLP-DRNLRIGELSAHSGLGRHTTTSATLYSLPGGGELIDSPGVAVFGLAEVDP 235 Query: 281 EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 ++ Q + +FH YLG C++ DC+H D GCA+REAVE G ++ R+E Y ++L Sbjct: 236 TELAQTYRDFHPYLGKCRFNDCRHVRDKGCAVREAVEAGTLSPARYERYLKLL 288 >UniRef50_A0Q5F4 GTPase n=18 Tax=Francisella RepID=A0Q5F4_FRATN Length = 295 Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 106/247 (42%), Positives = 151/247 (61%), Gaps = 3/247 (1%) Query: 89 EGVNVKGIVEAVHERTSVLTRPDFYD-GVKPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 E N ++ + +R ++++RP+ Y K IAANID VI+ P + IDRYL A Sbjct: 44 EYTNATYVITKLLDRKNLISRPNQYQRKNKNIAANIDSAVIIITHSPAPVEHYIDRYLAA 103 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 IEPIIV+NKID + + +DIY+NIGY++ +S+ G+ L E L Sbjct: 104 LHNSDIEPIIVINKIDDQSENDRQHLQCIIDIYKNIGYKIFYISAKNNIGIDSLLEELKD 163 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 + SIF GQSGVGKS LN +LG +K T ++SD++ G+HTTT + LY ++IDS Sbjct: 164 KTSIFIGQSGVGKSETLNTILG-EKITATTEVSDSTKKGRHTTTCSTLYEINGSTNIIDS 222 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDT-DPGCAIREAVEEGKIAETRF 326 PG+REFGLWH+ E++ GF++F Y G+C++R+C H+ GC I + V G I RF Sbjct: 223 PGIREFGLWHISQEELFDGFLDFKKYKGMCQFRNCSHEEGSKGCEIVKQVSLGNINPVRF 282 Query: 327 ENYHRIL 333 +NYHRIL Sbjct: 283 KNYHRIL 289 >UniRef50_C4ZNY5 Ribosome small subunit-dependent GTPase A n=3 Tax=Betaproteobacteria RepID=C4ZNY5_THASP Length = 314 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 119/306 (38%), Positives = 179/306 (58%), Gaps = 19/306 (6%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAV 100 +G+V++ FG H +V++A G + +C R S GD V PG + +G++E + Sbjct: 16 DGVVVAAFGRHYEVDTARGRL-QCYPRGKKSSYACGDEVELVPGG------DGQGVIETL 68 Query: 101 HERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN 160 H R ++L R D + K IA+N+ +VIV A P S ++ R + A E+ I P+IVLN Sbjct: 69 HPRRNLLWRSDAFR-EKLIASNLSHLVIVVATEPGFSDLLVSRCIAAAESQGIVPLIVLN 127 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220 K DL + Q++ +R +GY V+ VS+ G L L G +IF GQSG+GK Sbjct: 128 KADLAAR--LEAARHQLEPFRKLGYEVVEVSA--LQGADALRARLAGLQAIFVGQSGMGK 183 Query: 221 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP------HGGDVIDSPGVREFG 274 S+L NA++ + + T +ISD G+HTTT ARLYH P GG +IDSPG++ FG Sbjct: 184 STLTNAIVP-EAQAATREISDALDSGKHTTTFARLYHLPVTADEARGGWLIDSPGLQVFG 242 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L HL E + + FVE +LG C++RDC+HD++PGCA+ A+E G I R+E++ I Sbjct: 243 LAHLAAEDLAETFVELRPHLGRCRFRDCRHDSEPGCALLGALEAGAIHPRRWEHFRAIRS 302 Query: 335 SMAQVK 340 +A+ + Sbjct: 303 EIAEAR 308 >UniRef50_Q2YB53 Putative ribosome biogenesis GTPase rsgA n=6 Tax=Betaproteobacteria RepID=RSGA_NITMU Length = 313 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/298 (37%), Positives = 173/298 (58%), Gaps = 12/298 (4%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 P G +++ FG H V++AD C +R GD V + + +G++E Sbjct: 13 PLRGEIVAAFGRHFLVKTADESTLTCVLRGKKSGAACGDWV------EIYQTASEQGVIE 66 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIV 158 + R+++L R D K IAAN Q++IV A +P S +I+R LVA E+ Q+ +IV Sbjct: 67 RILPRSALLYRSDL-SREKLIAANATQVIIVVAPVPSFSEELINRCLVAAESQQLSVLIV 125 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 LNK DLL +A + +YR + Y +L +S+ ++ +KPL L +S+ GQSG+ Sbjct: 126 LNKTDLLGPSKVAL--NGLSLYRELDYTLLPISA--RNDVKPLLPYLEDNLSVLVGQSGM 181 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKS+++NAL+ E T DIS G+HTTT ARLYH +IDSPG+++FGL HL Sbjct: 182 GKSTIINALVP-DAERATGDISPTLDAGRHTTTHARLYHLDRNARIIDSPGIQQFGLQHL 240 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 E I GF EF Y+G CK+ +C+H +PGCA+ A+ E +++ R + YH+++ S+ Sbjct: 241 SIEAIAWGFREFRPYIGKCKFNNCRHSGEPGCALANAMRESEVSVRRIDLYHKLIASL 298 >UniRef50_B3QL20 Putative ribosome biogenesis GTPase rsgA n=11 Tax=Chlorobiaceae RepID=RSGA_CHLP8 Length = 311 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 122/312 (39%), Positives = 184/312 (58%), Gaps = 26/312 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRSLVT----------GDRVVWRPGKPAAEGV 91 G+V G VE+ DG RC RT+ S V+ GDRV +RP A+E Sbjct: 7 GVVTRVTGATYIVETGDGPKVRC---RTVPSTVSENEGSNLVAVGDRVEFRP--KASETE 61 Query: 92 NVKGIVEAVHERTSVLTRPDFY------DGVKPIAANIDQIVIVSAIL-PELSLNIIDRY 144 +G++ V ER SVL R + + IAANIDQIV++++ P + ++DRY Sbjct: 62 MAEGVIVRVEERRSVLERRREVRRNRSKEKEQVIAANIDQIVLITSFDDPPFNSRLVDRY 121 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 LV E+ + +IV+NKIDL D+EGM V E +++YRN+ + +VS+ G++ L E Sbjct: 122 LVFAESEHLPLLIVVNKIDL-DEEGM--VEEDLEVYRNLDCNICLVSAEDGRGIEELREL 178 Query: 205 LTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 L R+S F+G SGVGKS+L+N L+G ++E+ T + S +G G HTTT++ ++ P GG V Sbjct: 179 LRDRLSAFSGHSGVGKSTLINLLVG-REELRTAETSGKTGKGVHTTTSSAMFQLPGGGYV 237 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID+PG+REF L + E + + EF ++ C + C H +PGCA+ AVE G+I Sbjct: 238 IDTPGIREFNLAGITRENLRFYYTEFLRFMPECAFSSCSHTVEPGCAVIAAVESGRIDAE 297 Query: 325 RFENYHRILESM 336 R+E+Y +L+S+ Sbjct: 298 RYESYLALLDSL 309 >UniRef50_D0L125 Ribosome small subunit-dependent GTPase A n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L125_HALNC Length = 321 Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 114/309 (36%), Positives = 173/309 (55%), Gaps = 18/309 (5%) Query: 34 NLFGEPDEGI----VISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAE 89 N PDE + VI+ G +E+A+G + R N RRT+ L TGDRV WR G+ A E Sbjct: 15 NRQSAPDESLERATVITHHGTELIIENAEGKLLRANARRTLGVLTTGDRVGWRTGEDARE 74 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACE 149 I+E V+ R++ L RPD + + +AANIDQ++I+ A P ++ N+++R LVA Sbjct: 75 ------IIEFVYPRSNTLIRPDTHGKTRLMAANIDQVLIILAPTPWMNPNVVERTLVAAL 128 Query: 150 TLQIEPIIVLNKIDLL---DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 L PIIVLNK+DLL E A + + + ++ ++ +S+ T +G+ L L Sbjct: 129 DLPATPIIVLNKVDLLTTTQPEHRALIEQTLALWAAQDIDIVRISTRTGEGIDALRNVLN 188 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTT---TAARLYHFPHGGD 263 +IS+ G SGVGK+SL ++ N++S +S GQHTT T RL H P G Sbjct: 189 DKISMMIGLSGVGKTSLARSITAQAATAAINELSAHSQEGQHTTRHSTLFRLDHMP--GG 246 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 +ID+PGVR+F + + + I + F + G C++ +C H +P CA+R AV ++ Sbjct: 247 LIDAPGVRDFAVAAQDAQAIDRAFPDILRLAGGCRFYNCTHSQEPNCAVRAAVANSQLDS 306 Query: 324 TRFENYHRI 332 RFENY + Sbjct: 307 RRFENYQSL 315 >UniRef50_A5EV96 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Cardiobacteriaceae RepID=RSGA_DICNV Length = 316 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/329 (33%), Positives = 171/329 (51%), Gaps = 20/329 (6%) Query: 4 NKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHR 63 +KLS QQRR++ + Q +L D +V++ G V+ G++ Sbjct: 2 SKLSHQQQRRIHNHRQNKLAAGDRA-----------DAALVVAHLGYQLIVDD-HGEILA 49 Query: 64 CNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANI 123 + R+ + ++ DRV+ +P IVE ++ R L + +KP+A+NI Sbjct: 50 ADWRQKLGAIAVNDRVLITRDQPQ------HAIVEGIYPREKTLYK-QHAGKLKPVASNI 102 Query: 124 DQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI 183 DQ++I A +P+ ++DR+LVA IEP NK DL D + A ++ IY + Sbjct: 103 DQLLITFAPVPDWQNALLDRFLVAAHQAHIEPAFFCNKSDLFDAQTFAAAENRLAIYHQL 162 Query: 184 GYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNS 243 GYRV S + + GL+ L L+GR ++ GQSGVGKSS ++ L+ ++ T +S Sbjct: 163 GYRVFYGSIYQKTGLEELTHWLSGRQTVICGQSGVGKSSFIHYLMP-DIDVWTQAVSAAR 221 Query: 244 GLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 G GQHTT AR Y +ID+PGVR F L HL+ ++ GF E H Y C++ DC Sbjct: 222 GFGQHTTRNARRYPLDAHTAIIDTPGVRGFSLTHLQHSEVVSGFPEIHQYTHECRFNDCS 281 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRI 332 H +P C ++ A+E G I+ RF + +I Sbjct: 282 HQHEPDCGVQRALERGDISLERFNSMMQI 310 >UniRef50_B2JF36 Putative ribosome biogenesis GTPase rsgA n=56 Tax=Betaproteobacteria RepID=RSGA_BURP8 Length = 317 Score = 190 bits (482), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 115/302 (38%), Positives = 174/302 (57%), Gaps = 14/302 (4%) Query: 42 GIVISRFGMHADVESADGD-VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAV 100 G+VI+ G H V DG + +C R + GD+V++ P +G++ + Sbjct: 24 GLVIAAHGRHYIVAPEDGSAILQCFPRGKRSEIAVGDQVLYEPTSAD------QGVIVEI 77 Query: 101 HERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN 160 ER ++L R D Y K AAN+DQ++IV A P S +++ R LVA E +++P+IVLN Sbjct: 78 GERRNLLYRSDQYKS-KLFAANLDQLLIVLATEPHFSEDLLGRALVAAEENELKPLIVLN 136 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ-DGLKP-LEEALTGRISIFAGQSGV 218 KID+ + + +++ +YR +GY VL VS Q D + LE L G ++ GQSG+ Sbjct: 137 KIDV--EAALPLARKRLQLYRGLGYTVLEVSIKGQPDAARATLEAHLNGHSTLLLGQSGM 194 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG-GDVIDSPGVREFGLWH 277 GKS+L+N L+ E+ T +IS G+HTTT RLY P G +IDSPG +EFGL H Sbjct: 195 GKSTLVNLLIP-DAEVATREISTALNSGRHTTTFTRLYPLPGSEGALIDSPGFQEFGLHH 253 Query: 278 LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 L ++ + F EF L C++ +C H +PGCAI EAV +G+IA+ R Y +++ + Sbjct: 254 LTEGKLERAFPEFRPLLAECRFYNCHHLHEPGCAILEAVADGRIAKERHALYAQLVHEAS 313 Query: 338 QV 339 Q+ Sbjct: 314 QI 315 >UniRef50_C9RJ19 Ribosome small subunit-dependent GTPase A n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ19_FIBSS Length = 410 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 106/247 (42%), Positives = 155/247 (62%), Gaps = 7/247 (2%) Query: 94 KGIVEAVHERTSVLTRP---DFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACE 149 K V V R S L RP D + + +AANIDQ+VIV+++ PE + +DR+L+A Sbjct: 164 KYCVVRVLPRKSELKRPGPRDSFYKQQTLAANIDQVVIVASVTQPEFNYGFMDRFLLAAN 223 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 + ++VL K+DLL + G A ++ + + I +V+ VS + DGL+ L L G+ Sbjct: 224 LNDLPFVLVLTKMDLLPN-GEADLSSDIRDFMKIVDKVIPVSVKSGDGLEVLRNELVGKS 282 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 S+F+G SGVGKS+L+N L+ E+ T D+ + G G+HTTT++ L+ FP GG VID+PG Sbjct: 283 SVFSGMSGVGKSTLINELVP-HAELRTGDVRERDGKGRHTTTSSSLFDFPGGGYVIDTPG 341 Query: 270 VREFGLWHLEPEQITQGFVE-FHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 +R GL +EPE + + F F D L CK+ +CKH +PGCA+R AVE GKI+E R+ + Sbjct: 342 IRSIGLMDMEPETLAKIFPGFFEDDLFTCKFSNCKHLKEPGCAVRAAVESGKISEARYAS 401 Query: 329 YHRILES 335 Y RIL S Sbjct: 402 YVRILNS 408 >UniRef50_B3QS55 Ribosome small subunit-dependent GTPase A n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS55_CHLT3 Length = 334 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 116/319 (36%), Positives = 177/319 (55%), Gaps = 30/319 (9%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRSLVT----------GDRVVWRPGKPAAEGV 91 GI+ GMH V+++DG+ + C RT+RS V+ GD V + E Sbjct: 19 GIIFEGKGMHYLVQASDGEFYNC---RTLRSTVSENPDATLAVVGDSVTLKSTLAPDEEN 75 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKP------IAANIDQIVIVSAI-LPELSLNIIDRY 144 +G++ V ER L R + +A+NI+QIVIVS++ +P + L +IDRY Sbjct: 76 YGEGVITKVFERRMKLARKRNRKTNRSGEAEHVMASNIEQIVIVSSVAMPPIRLGLIDRY 135 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 L E+ + +IV+NK+DL E +A ++IYR +GY+ L+VSS T G+ L Sbjct: 136 LAFAESEGLNALIVVNKMDLEHSEELA---GDVEIYRLLGYKSLLVSSVTGMGMDELRRE 192 Query: 205 LTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG--- 261 L +IS+F G SGVGKS+L+NAL G +++ D+S S G HTT+ A + P Sbjct: 193 LGQKISVFTGHSGVGKSALINALTG--EDLRIGDVSQKSLKGAHTTSNAVMLSIPGKTRD 250 Query: 262 --GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEG 319 G VID+PG+REF L ++P + F+EF ++ C + C H +P CA+R+A + G Sbjct: 251 DVGYVIDTPGIREFALAGIDPLDLRHFFIEFQNFAPDCGFSSCTHTLEPNCAVRDAYQNG 310 Query: 320 KIAETRFENYHRILESMAQ 338 KI TR+E+Y I ++ + Sbjct: 311 KIFPTRYESYLTIYATLEE 329 >UniRef50_D1R990 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R990_9CHLA Length = 383 Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 119/326 (36%), Positives = 183/326 (56%), Gaps = 29/326 (8%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIR-------SLVT-GDRVVWRPGKPAAE 89 E D+G VIS V S D + C +R ++ +LVT GD V++ P Sbjct: 67 ELDKGRVISIVPQGILVASGDQEF-LCTLRGVLKKERGLAKNLVTVGDFVLFEKTTPE-- 123 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAIL-PELSLNIIDRYLV 146 +G++ V R ++L+R D K IAANIDQ++I +++L P L ++IDRY++ Sbjct: 124 ----EGLIAHVEPRKTILSRADNLSRRKEQLIAANIDQVLITASVLSPPLKPSLIDRYII 179 Query: 147 ACETLQIEPIIVLNKIDLLD---------DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 A + + PIIV+NKIDLL ++ A ++ YR G +V+ VS+ T +G Sbjct: 180 ATQKGGMTPIIVVNKIDLLSTSDAEDPILEQEKALFETFLEGYRQAGLKVIPVSTVTGEG 239 Query: 198 LKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 ++ L+E + + S+F+GQSGVGKSSL+NAL+G ++ I + G HTTT L Sbjct: 240 IEALKEQMRDKSSVFSGQSGVGKSSLINALIG--SDLRIGKIVHRTKKGAHTTTTTHLMP 297 Query: 258 FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVE 317 GG ID+PG++ FG+W L+ ++ F E + CK+ +C H + CA+ +AVE Sbjct: 298 LDFGGWCIDTPGIKSFGVWDLDQNELESYFSEIYRVGRTCKFPNCSHLHEEDCAVIQAVE 357 Query: 318 EGKIAETRFENYHRILESMAQVKTRK 343 EGKI+ RFE+YH +L S+ Q R+ Sbjct: 358 EGKISLLRFESYHDLLHSITQKHLRR 383 >UniRef50_C5D8S1 Putative ribosome biogenesis GTPase rsgA n=6 Tax=Bacteria RepID=RSGA_GEOSW Length = 293 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 116/291 (39%), Positives = 166/291 (57%), Gaps = 21/291 (7%) Query: 57 ADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDF 112 ++G V +C R R + + GD V ++ +G + + ER + L RP Sbjct: 18 SEGKVFQCRGRGVFRKQKITPLVGDHVEFQATS------ETEGYIMNIRERKNWLVRP-- 69 Query: 113 YDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMA 171 PIA N++Q I++ SA+ P+ S ++DR+LV E+ I PIIV+NK+DL+DD+ Sbjct: 70 -----PIA-NVEQAILVFSAVEPDFSTRLLDRFLVLVESKHIRPIIVVNKMDLVDDQTKP 123 Query: 172 FVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ 231 + + + YR IGY V+ S+ T+ G++ L L G IS+FAGQSGVGKSSLLNAL Sbjct: 124 TMEQYIRDYRQIGYDVIETSTITKLGVEQLLSYLEGHISVFAGQSGVGKSSLLNALRP-D 182 Query: 232 KEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFH 291 ++ TNDIS + G G+HTT L GG V D+PG L +E E++ F EF Sbjct: 183 LQLKTNDISTHLGRGKHTTRHVELLEI-GGGLVADTPGFSALELDDIELEELPLYFPEFC 241 Query: 292 DYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 + CK+R C H +P CA+REAVE GKI R+ENY +E + + K R Sbjct: 242 ERSEECKFRGCLHIAEPKCAVREAVESGKIPSYRYENYISFVEEIKERKPR 292 >UniRef50_UPI000190AB8D ribosome-associated GTPase n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190AB8D Length = 103 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 87/93 (93%), Positives = 89/93 (95%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 +SKNKLSKGQQRRVNANHQRRLKTS EK DYDDNLFGEP EGIVISRFGMHADVESADG+ Sbjct: 11 LSKNKLSKGQQRRVNANHQRRLKTSAEKADYDDNLFGEPAEGIVISRFGMHADVESADGE 70 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNV 93 VHRCNIRRTIRSLVTGDRVVWRPGK AAEGVNV Sbjct: 71 VHRCNIRRTIRSLVTGDRVVWRPGKAAAEGVNV 103 >UniRef50_C5CF78 Ribosome small subunit-dependent GTPase A n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF78_KOSOT Length = 300 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 117/310 (37%), Positives = 185/310 (59%), Gaps = 29/310 (9%) Query: 42 GIVIS-RFGMHADVESADGDVHRCNIR-------RTIRSLVT-GDRVVWRPGKPAAEGVN 92 GIVI+ + G++ DG+ C +R +T +S+V GD V ++P + Sbjct: 3 GIVINVQKGLYKVRPVNDGEDINCTLRGRLFKQSQTTKSMVVVGDYVEFQPV------LG 56 Query: 93 VKGIVEAVHERTSVLTRPDFYDGVKP------IAANIDQIVIVSAIL-PELSLNIIDRYL 145 +G++ A+ ER S L R G K +AAN+DQ ++V A+ P+ N+I+RY+ Sbjct: 57 GRGVITAIEERKSKLVRKG--AGKKGSHLEQVVAANVDQAILVFAVKNPKYRKNLIERYI 114 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 V+ + IEP+I NKIDL++ ++ V E + R +GY VL+ S+ T +G+K L+ L Sbjct: 115 VSAKYGGIEPVICFNKIDLIN---LSEVQEDIKECRKLGYTVLLTSTITGEGIKKLKSLL 171 Query: 206 TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 +IS+FAG SGVGKSSL+NA+ +K+ TN++S + G+HTTT++++Y P GG +I Sbjct: 172 KDKISVFAGSSGVGKSSLVNAIFN-EKKTKTNEVSTSHYKGKHTTTSSQVYELPFGGRII 230 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D PG+REFG+ I F + + CK+RDC H +PGCA++EA+E G + E R Sbjct: 231 DVPGMREFGVID-NGTGIRDAFPDIIELAKHCKFRDCNHINEPGCAVKEAIESGLLEERR 289 Query: 326 FENYHRILES 335 + NY ++ +S Sbjct: 290 YRNYLKLKKS 299 >UniRef50_B9K7Z8 Putative ribosome biogenesis GTPase rsgA n=7 Tax=Thermotogaceae RepID=RSGA_THENN Length = 295 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 26/302 (8%) Query: 42 GIVISRFGMHADVESAD-GDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 GIV+S VE + G+ C +R R + GDRV + P + G+ Sbjct: 7 GIVLSFHSNMVTVEDEETGERLLCKLRGKFRLQNLKIYVGDRVEYTPDGTGS------GV 60 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIEP 155 +E V R ++L VKP AN+DQ I++V+ +PE S IID++LV E ++E Sbjct: 61 IENVLHRKNLL--------VKPHVANVDQAILVVTVKMPETSTYIIDKFLVLTEKNELET 112 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++V+NK+D+ D+E + V E IY + Y ++ S+ T G++ L++ L G+IS AG Sbjct: 113 VLVINKMDIYDEEDLEKVKELERIYSKL-YPIVKTSAKTGMGIEELKKYLKGKISTMAGL 171 Query: 216 SGVGKSSLLNAL-LGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGKSSLLNA+ GL+ + +++S G+HTTT+A+L F GG V+D+PG Sbjct: 172 SGVGKSSLLNAINPGLKLRV--SEVSQKLQRGRHTTTSAQLLRFDFGGYVVDTPGFANLE 229 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 + +EPE++ F EF++ C + DC H +P C ++EAVE G+IAE+R+ENY ++ Sbjct: 230 IGDIEPEELKYYFKEFNE--KQCFFSDCNHIDEPECGVKEAVENGEIAESRYENYVKMFH 287 Query: 335 SM 336 + Sbjct: 288 EL 289 >UniRef50_D1T763 Ribosome small subunit-dependent GTPase A n=2 Tax=Burkholderia RepID=D1T763_9BURK Length = 329 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 120/323 (37%), Positives = 174/323 (53%), Gaps = 26/323 (8%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVH-RCNIRRTIRSLVTGDRVVWRPGKPAAEGV 91 + G G+V++ G H V DG +C R + GDRV++ P A +GV Sbjct: 15 SGMHGTRTGGLVVAAHGRHYLVAPEDGGAPLQCFPRGKRSEVAVGDRVIYEPTS-ADQGV 73 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 IVE + ER ++L R D Y K AAN+DQ++IV A P S +++ R LVA E Sbjct: 74 ----IVE-IGERRNLLYRSDQYKS-KLFAANLDQLLIVLATEPHFSEDLLGRALVAAEAN 127 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQD--GLKPLEEALTGRI 209 +++P+IVLNKID+ + ++++ YR +GY VL VS Q L E L G Sbjct: 128 ELKPLIVLNKIDV--TAALDGARKRLEPYRALGYPVLEVSIRMQPEAARATLTEHLHGHA 185 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH--------- 260 ++ GQSG+GKS+L+N L+ E+ T +IS G+HTTT RLY PH Sbjct: 186 TLLLGQSGMGKSTLVNLLIP-DAEVATREISTALNSGRHTTTFTRLYPLPHSSDTAGVNA 244 Query: 261 ----GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAV 316 G +IDSPG +EFGL HL ++ + F EF L C++ +C H +PGCAI EAV Sbjct: 245 VNGAAGALIDSPGFQEFGLHHLTEGRLERAFPEFRPLLPNCRFYNCHHLHEPGCAILEAV 304 Query: 317 EEGKIAETRFENYHRILESMAQV 339 +G+I R Y +++ +Q+ Sbjct: 305 ADGRIRRERHALYAQLVHEASQI 327 >UniRef50_C9MMH3 Ribosome small subunit-dependent GTPase A n=7 Tax=Prevotella RepID=C9MMH3_9BACT Length = 335 Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 109/319 (34%), Positives = 169/319 (52%), Gaps = 22/319 (6%) Query: 42 GIVISRFGMHADVESADGDVHRCNIR--------RTIRSLVTGDRVVWRPGKPAAEGVNV 93 G+VI G V++ +G C I+ R+ + GD VV P K EG Sbjct: 24 GLVIKNTGSWYTVKAENGKNIDCKIKGNFRLKGIRSTNPVAVGDHVVITPNK---EGT-- 78 Query: 94 KGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACET 150 + + +R + + R P+ IAANIDQ +V I PE S IDR+L E Sbjct: 79 -AFITEIEDRRNYIIRKSPNLSKQSHIIAANIDQAFLVVTINYPETSTTFIDRFLAGAEA 137 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS----SHTQDGLKPLEEALT 206 ++ +V NK DLL +E + + + M +Y IGY + V + + ++ L L Sbjct: 138 YRVPVTLVFNKHDLLSEEELRYQHAVMKLYETIGYECIEVQATNDTSNEFSVEKLNPLLA 197 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 +I++ +G SGVGKS+++NALL + T DISD G HTTT + + P GG +ID Sbjct: 198 NKITLLSGNSGVGKSTIINALLP-HVNLRTADISDAHNTGMHTTTFSEMLELPVGGYLID 256 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG++ FG + +E E++T F E + CK+ +C H +PGCA+R+AVE+ I+E+R+ Sbjct: 257 TPGIKGFGTFDIEREELTSYFREIFKFSEHCKFSNCTHTHEPGCAVRKAVEDHYISESRY 316 Query: 327 ENYHRILESMAQVKTRKNF 345 +Y +LE + K R+ F Sbjct: 317 NSYLSMLEDKEENKYREAF 335 >UniRef50_D2R982 Ribosome small subunit-dependent GTPase A n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R982_9PLAN Length = 375 Score = 180 bits (456), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 107/318 (33%), Positives = 178/318 (55%), Gaps = 22/318 (6%) Query: 30 DYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVT--------GDRVVW 81 D ++ E G V+S G+ + V+ G++ RC RR +++L T GD V + Sbjct: 69 DVTPDVSSEMIAGRVLSVHGLLSHVQIPSGEIIRCATRRVLKNLSTDQRHVVAAGDIVYY 128 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNI 140 RP + +G++E + R + L+R I AN+DQ++IV SA P L N+ Sbjct: 129 RPNGTS------EGLIERIEPRANTLSRTS-KGRQHVIVANVDQVLIVASAAEPSLKPNL 181 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKP 200 IDR +V E I P++ +NK+DL++ + + +Y +GY VL++S+ G+ Sbjct: 182 IDRMIVEAERTGIRPVVCINKVDLVEPSDLQPI---AGVYGQLGYDVLLLSAKENWGISR 238 Query: 201 LEEALTGRISIFAGQSGVGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L + + G+ ++ AGQSGVGKSS+LNA+ GL + +S+ + G+HTTT A+L Sbjct: 239 LRKLVAGKQTVVAGQSGVGKSSILNAIENGLALRV--GRVSEENQKGRHTTTTAKLIPLA 296 Query: 260 HGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEG 319 GG V+D+PG+R F LW + P ++ + + Y+ LC+Y DC H + CA+++AV +G Sbjct: 297 AGGYVVDTPGIRSFELWDIIPAEVIGYYRDLRPYVCLCRYPDCTHLHETDCAVKDAVADG 356 Query: 320 KIAETRFENYHRILESMA 337 ++ R+E+Y + E A Sbjct: 357 RLDVRRYESYCYLFEGDA 374 >UniRef50_C6WWG3 Ribosome small subunit-dependent GTPase A n=4 Tax=Betaproteobacteria RepID=C6WWG3_METML Length = 325 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 162/290 (55%), Gaps = 14/290 (4%) Query: 41 EGIVISRFGMHADVESADGDVH-RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 +G V++ +G VE D C R L GD V+ + +G+VE+ Sbjct: 36 QGTVVAAYGKRYQVELTDTKQRISCVTRGKKTDLACGDFVLVKLTDKE------EGVVES 89 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 R ++L R + + K +AAN+ QI+IV A P +++R L+A E I+ +IVL Sbjct: 90 TLPRKTLLFRSNAFKS-KMLAANVTQIIIVLATQPSFYEALLNRCLIAAEAAGIKALIVL 148 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 NK DL D+ ++++Y +GY+VL +S+ + + L L +SI GQSG+G Sbjct: 149 NKCDLTDNHDAL---RKLELYSKLGYQVLPLSA--KLDISSLRPYLQDEVSILVGQSGMG 203 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KS+++NALL + + T ++S G+HTTTAA LYH +IDSPG++EFGL HL Sbjct: 204 KSTIINALLP-SEAVRTQEVSHVLDSGKHTTTAAHLYHLDASSQLIDSPGLQEFGLHHLN 262 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +++ F+EF +LG C++ +CKH +P CAI EA+ + KI+ R Y Sbjct: 263 TDELEHAFIEFRPFLGKCRFNNCKHLQEPDCAITEALSQDKISAERLAIY 312 >UniRef50_Q11RI7 Putative ribosome biogenesis GTPase rsgA n=3 Tax=Sphingobacteriales RepID=RSGA_CYTH3 Length = 307 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 166/306 (54%), Gaps = 20/306 (6%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIR--------RTIRSLVTGDRVVWR--PGKPAAEG 90 +GI+ G V++ DG + +R + L GD V P P Sbjct: 2 KGIIYKSTGSWYLVKAEDGTYYNARLRGKFKHLDLKVTNPLSVGDFVDMNIDPLTPT--- 58 Query: 91 VNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQ-IVIVSAILPELSLNIIDRYLVA 147 + ++ + RT+ + R + IA NIDQ I++V+ P+ S+ IDR+L++ Sbjct: 59 ---EAMIFNIEPRTNYIIRRSSHKTAFGHLIACNIDQSILLVTLKQPKTSIGFIDRFLIS 115 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 CE +I +IV NK DL ++ M D+Y +GYR ++ S ++GL L L Sbjct: 116 CEAFRIPAVIVFNKSDLYNEALMEEYLYLKDVYEPLGYRCILTSMEKENGLDELMPLLQN 175 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 +IS+ +G SGVGKS+L+N + Q +I T+ ISD+S G+HTTT A +Y VID+ Sbjct: 176 KISVVSGHSGVGKSTLINKIFP-QLDIKTDIISDHSQKGKHTTTFAEMYDLNETSKVIDT 234 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG++E GL+ +E + ++ F E +G C++ +CKH +PGC ++E VE KIA TR+E Sbjct: 235 PGIKELGLFEIENDVLSHYFPEMRSLMGQCRFHNCKHTNEPGCRVKEYVEAFKIAPTRYE 294 Query: 328 NYHRIL 333 +Y I+ Sbjct: 295 SYCSII 300 >UniRef50_A7HNP9 Ribosome small subunit-dependent GTPase A n=5 Tax=Thermotogaceae RepID=A7HNP9_FERNB Length = 302 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 111/305 (36%), Positives = 176/305 (57%), Gaps = 27/305 (8%) Query: 42 GIVISRFGMHADVESAD-GDVHRCNIRRTIRSL----VTGDRVVWRPGKPAAEGVNVKGI 96 GIV+ + VE + G+ C +R + +TGD V + + V +G+ Sbjct: 14 GIVVKFYSNLLVVEDIETGEQFLCKLRGKFKKQGIRPITGDIVEY------TKIVGNEGV 67 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 VE + R S L +P ANIDQ++IV+ I P + L+I+DR++V E + Sbjct: 68 VENILNRKSELKKPS--------VANIDQVIIVTTIDKPAVPLDILDRFIVLVEYEGLPI 119 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +IVLNK+DLL +E + E IY+ + Y V+ S+ T G++ L++ L+G+IS+FAG Sbjct: 120 VIVLNKVDLLKEEQ---IKEFESIYKKL-YPVVKTSAMTGYGIEELKQQLSGKISVFAGM 175 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSLLN++ K + T +IS+ G G+HTTTAA L GG V+D+PG + Sbjct: 176 SGVGKSSLLNSIENNLK-LRTGEISEKLGRGKHTTTAAELLRLSFGGWVVDTPGFASLDI 234 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 H+ + + F+EF + C + DC H +PGC ++E V++GKI +R+E+Y R+LE Sbjct: 235 DHISENILRELFIEFEN--DKCYFPDCYHIDEPGCHVKEMVKKGKIPYSRYESYQRMLEE 292 Query: 336 MAQVK 340 + +++ Sbjct: 293 LQELR 297 >UniRef50_A1HMW6 Ribosome small subunit-dependent GTPase A n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMW6_9FIRM Length = 291 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 113/310 (36%), Positives = 169/310 (54%), Gaps = 28/310 (9%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIV 97 G+V+ + + V++ D + C +R + SL+ GD V + P EG KG++ Sbjct: 4 GVVVKAYNSYYYVQTGD-KLTMCTLRGRFKKERFSLLVGDEVEYLP---LDEG---KGVI 56 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPI 156 E + R S+L RP + AN+DQ+++ +A P+ S IIDR+L+ E Q+ Sbjct: 57 ETILPRRSMLKRP--------MVANVDQVILTFAAASPDPSFVIIDRFLILAELSQLNAQ 108 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I LNKIDL D A + + +D+YR IGY VL S T G+ L L GRI++FAG S Sbjct: 109 ICLNKIDLAD---AAEIGQIVDLYRKIGYSVLETSVKTGQGIDELRRQLYGRITVFAGPS 165 Query: 217 GVGKSSLLNAL-LGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 GVGKSSLLNA+ GL ++T +IS G G+HTT A L GG V+D+PG Sbjct: 166 GVGKSSLLNAVEPGLS--LVTGEISIKIGRGKHTTRFAELLPLAGGGFVVDTPGFSFTEF 223 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 + P ++ + F E CK+ C H +P CA+++AV +G IA +R+ +Y +L Sbjct: 224 ADIVPTELARAFPEIAAAAPACKFNTCLHHKEPQCAVKQAVTDGCIAASRYASYLEVLSE 283 Query: 336 MAQVKTRKNF 345 + + RK + Sbjct: 284 VQE--NRKGY 291 >UniRef50_C1ABL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RSGA_GEMAT Length = 307 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 107/269 (39%), Positives = 151/269 (56%), Gaps = 15/269 (5%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIV- 129 L GDRV AE + I H RTS L R P G + + AN+DQ+++V Sbjct: 45 LAVGDRVTIARDAQHAETWAITDI----HPRTSKLARRMPGGRYGERIVVANLDQVLVVF 100 Query: 130 SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDE-GMAFVNEQMDIYRNIGYRVL 188 +A P+ ++DR+LV E + IV+NK DL+ E A +QM GY V Sbjct: 101 AAARPDPHPRMLDRFLVIAEANGLSARIVINKADLVSPEVSAALFADQM----AAGYPVH 156 Query: 189 MVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL-GLQKEILTNDISDNSGLGQ 247 S HT +GL+ L + + R S +G SGVGKSSL+NAL GL ++ T +SD G+ Sbjct: 157 HTSIHTGEGLEALRDEVEHRSSALSGPSGVGKSSLMNALFPGL--DLRTAAVSDAVNKGR 214 Query: 248 HTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD 307 HTT A L+ PHGG + D+PG+RE GLW +E Q+ F EF L C++ DC H + Sbjct: 215 HTTVGAMLHPLPHGGFIADTPGLREVGLWGIEAGQVASCFPEFRPLLSACRFADCIHTVE 274 Query: 308 PGCAIREAVEEGKIAETRFENYHRILESM 336 PGCA+REAVE G ++ R+E+Y ++ + + Sbjct: 275 PGCAVREAVEAGDVSPGRYESYVKLRDEL 303 >UniRef50_A6GW90 Putative ribosome biogenesis GTPase rsgA n=25 Tax=cellular organisms RepID=RSGA_FLAPJ Length = 326 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 172/310 (55%), Gaps = 27/310 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIR--------RTIRSLVTGDRVVWRPGKPAAEGVNV 93 GIV G V+S G C I+ ++ + GD V + + + V Sbjct: 3 GIVYKSTGSWYTVKSLQGHFMECRIKGKFRMKGIKSTNPIAVGDVVDYDLDENSDV---V 59 Query: 94 KGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACET 150 G + +H+R + + R + + IA+N+D + ++ I P + N IDR+LV + Sbjct: 60 TGTITKIHDRKNYIVRKSVNLSHQMHIIASNLDYVFLLITINNPPTTTNFIDRFLVTAQA 119 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQM---DIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 IE I+V NKID ++ A ++EQ+ IY+ IGY+ L VSS G++ L+ + Sbjct: 120 YGIETILVFNKIDTYNE---AMLDEQLFMQYIYQEIGYKCLRVSSTEGKGIEELKNIMKN 176 Query: 208 RISIFAGQSGVGKSSLLNAL---LGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 ++++F+G SGVGKS+L+NA+ L L+ T IS+ S GQHTTT A +Y G + Sbjct: 177 KVTMFSGHSGVGKSTLVNAMEPTLHLK----TKTISEQSKQGQHTTTFAEMYDLSFGAQI 232 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID+PG++ FG+ +E E+I+ F EF CK+ +C H +P CA+++A+E+ KI+ + Sbjct: 233 IDTPGIKGFGIVDMEKEEISGYFPEFFKLKDQCKFNNCLHKDEPKCAVKDALEKDKISYS 292 Query: 325 RFENYHRILE 334 R+ +Y +ILE Sbjct: 293 RYNSYLKILE 302 >UniRef50_Q7UUZ6 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Rhodopirellula baltica RepID=RSGA_RHOBA Length = 313 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 109/319 (34%), Positives = 178/319 (55%), Gaps = 30/319 (9%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSL--------VTGDRVVWRP 83 +DNL +G V+S G+ + V +G ++ C +R+ ++SL V GDRV +R Sbjct: 5 EDNLL----QGRVLSVHGLQSKVLGDNGVLYACAVRQVLKSLSTSQRNVIVAGDRVWFR- 59 Query: 84 GKPAAEGVNVK----GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSL 138 + +GV++K G++E V RT +++R + +NID ++I+ SA P + Sbjct: 60 -SESRDGVSLKSEADGMIERVEPRTGMISRTS-RGRQHVLVSNIDAMLIIASAEQPGIKP 117 Query: 139 NIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGL 198 +IDR ++ QIEPI+++NK+DL+D + + + +Y ++GYRVL S+ T + Sbjct: 118 ALIDRMILTAHQCQIEPIVIINKVDLID---LVDLQPLIGVYSSLGYRVLPTSAETGQNV 174 Query: 199 KPLEEALTGRISIFAGQSGVGKSSLLNAL---LGLQKEILTNDISDNSGLGQHTTTAARL 255 L L R + AGQSGVGKSSLLNA+ LGL +S ++ G+HTTTA++L Sbjct: 175 AYLRALLKDRQTALAGQSGVGKSSLLNAVQPGLGLA----IGAVSSDNDKGKHTTTASQL 230 Query: 256 YHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREA 315 GG V D+PG+R+F LW + ++ + Y+ C+Y DC H + CA++ A Sbjct: 231 IPLADGGAVFDTPGIRQFQLWDISAGEVAGLMPDLRPYVSGCRYPDCLHLAEDDCAVKTA 290 Query: 316 VEEGKIAETRFENYHRILE 334 V + +I R++ Y +LE Sbjct: 291 VADARIDARRYDAYCHLLE 309 >UniRef50_Q6MEY3 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEY3_PARUW Length = 354 Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 97/262 (37%), Positives = 155/262 (59%), Gaps = 14/262 (5%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVI-VSAILPELSLNIIDRYLVACET 150 +GI+ +V R ++L+R D K IA NIDQ++I VS + P L ++IDRY++A Sbjct: 95 EGIIASVKPRRTILSRADNLSRRKEQLIAVNIDQVIITVSVVNPPLKPSLIDRYIIAAHK 154 Query: 151 LQIEPIIVLNKIDLLD--DEGMAFVNEQMDIYRNI--GYRV-----LMVSSHTQDGLKPL 201 ++P+IV+NK+DL D DE ++ D+Y+ + Y V + VS+ +GL L Sbjct: 155 GNMDPLIVINKVDLFDADDEDQILREQEKDLYQELLKAYAVAKVPVISVSAAKNEGLDLL 214 Query: 202 EEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 +A+ G+ S+F+GQSGVGKSSL+NA+ GL ++ + + + G HTTT +L G Sbjct: 215 RQAMLGKSSVFSGQSGVGKSSLINAMTGL--DLRVGETVERTKKGSHTTTTTQLIPLEFG 272 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI 321 G ID+PG++ FG+W L+ ++ F E H CK+ DC H + CA+R+AVEE I Sbjct: 273 GWCIDTPGIKSFGIWDLDKSEVEGYFPEIHACGLNCKFPDCTHSHEEQCAVRQAVEEEHI 332 Query: 322 AETRFENYHRILESMAQVKTRK 343 + R+ +Y ++E+ + R+ Sbjct: 333 SFVRYMSYQVLMETSNEKHIRR 354 >UniRef50_A1KRU2 Putative ribosome biogenesis GTPase rsgA n=29 Tax=Neisseriaceae RepID=RSGA_NEIMF Length = 307 Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 155/289 (53%), Gaps = 17/289 (5%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIV-E 98 D + + +G V + DG + + R+ GDRV P VN + +V E Sbjct: 22 DTAQITASYGRRYIVRTPDGTTYEASTRKKRVDFACGDRVRISP-------VNAEQVVIE 74 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIV 158 R S+L R D + K IAAN+ Q++IV+A +P S+ ++ R L+A E IE +IV Sbjct: 75 DFLPRQSLLYRQDAWK-TKLIAANVTQLLIVTAAVPSPSMRLLQRALLAAEAAGIEAVIV 133 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS-HTQDGLKPLEEALTGRISIFAGQSG 217 LNK DL + A E++ Y +GY V+ + D L+P+ L G +I GQSG Sbjct: 134 LNKADLPE---TALWREKLKFYETLGYPVIETRALENADLLRPV---LQGHSNILLGQSG 187 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 +GKS+L NALLG Q T DIS G+HTTT ARLY +IDSPG++EFGL H Sbjct: 188 MGKSTLTNALLGSQTA-RTGDISAALDSGKHTTTHARLYDLNGETQLIDSPGLQEFGLHH 246 Query: 278 LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 L+ + + F +F +G C++ +C H +PGCA + A E G + R Sbjct: 247 LQAADLPRYFPDFRHLVGQCRFHNCTHRAEPGCAFKAAAETGAASPERL 295 >UniRef50_B9L2Y7 Ribosome small subunit-dependent GTPase A n=2 Tax=Thermomicrobia (class) RepID=B9L2Y7_THERP Length = 329 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 94/230 (40%), Positives = 136/230 (59%), Gaps = 5/230 (2%) Query: 114 DGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAF 172 + + I AN+DQ+V+V +A PELSL ++DR+LV E+ + +I LNKIDL D G A Sbjct: 88 EAAQVIVANLDQLVVVMAAAQPELSLGMLDRFLVVAESQDLPTVICLNKIDL-DPAGRA- 145 Query: 173 VNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQK 232 + YR IGY V+ S + GL L + + G++S AG SGVGK+SL+ A Sbjct: 146 -RAMLAPYRAIGYPVVETSVASGAGLHELWQTIEGKLSALAGPSGVGKTSLVKAFRP-DL 203 Query: 233 EILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD 292 E+ +S+ +G G+HTTTA+ L ++D+PG+ LW + PE++ + F EF Sbjct: 204 ELRIGAVSEATGRGRHTTTASELIQLDERTFLVDTPGIGVLHLWAILPEELDRCFREFRP 263 Query: 293 YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 YLG C YRDC+H +PGCA+R AVE G I R+E Y + + + Q R Sbjct: 264 YLGACPYRDCRHLDEPGCAVRAAVEAGVIDAGRYERYRALYQDLVQEMER 313 >UniRef50_A3ZVZ2 Putative uncharacterized protein n=2 Tax=Planctomycetaceae RepID=A3ZVZ2_9PLAN Length = 257 Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/262 (37%), Positives = 155/262 (59%), Gaps = 14/262 (5%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SA 131 + GDRV +RP N +GI+E++ R +L R I AN+DQ++IV SA Sbjct: 2 VAAGDRVWFRPAD------NHEGIIESIEPRYGILCRASKRRQ-HVIVANVDQLLIVASA 54 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS 191 P L N+IDRYLV E I P+I +NK+DL+D A + + +Y +GY+V+++S Sbjct: 55 AEPYLKPNLIDRYLVTAEKAGITPVICINKVDLIDP---ADLQPLVGVYGQMGYQVILLS 111 Query: 192 SHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL-LGLQKEILTNDISDNSGLGQHTT 250 + G++ L A+ R S+ +GQSGVGKS++LNA+ GL + +S+ + G+HTT Sbjct: 112 ATEGIGVERLRAAVRDRASVLSGQSGVGKSTILNAIEPGLNLRV--GHVSETTDKGRHTT 169 Query: 251 TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGC 310 T + L GG V+D+PG+R+F LW + PE++ F + ++ C++ DC H + GC Sbjct: 170 TTSSLVPLAAGGHVVDTPGIRQFQLWDVIPEEVAGYFRDLRPFITGCRFPDCSHTHEEGC 229 Query: 311 AIREAVEEGKIAETRFENYHRI 332 ++ AV +G + R+E+Y +I Sbjct: 230 GVKGAVADGFLDVRRYESYCQI 251 >UniRef50_B1YIP8 Ribosome small subunit-dependent GTPase A n=2 Tax=Exiguobacterium RepID=B1YIP8_EXIS2 Length = 301 Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 120/312 (38%), Positives = 169/312 (54%), Gaps = 31/312 (9%) Query: 41 EGIVISRFGMHADVESADGDVH---RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIV 97 EG +I G DV + G++ R N R+ S V GD VV G + Sbjct: 11 EGTIIRLQGGFYDVMTPQGEIRSRARGNFRKRGISPVVGDEVVLHIESET-------GYI 63 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIEPI 156 V +R + L RP P+A NIDQ +++VSA P+ S +++DR+LV E +I+PI Sbjct: 64 LEVKDRQNFLVRP-------PVA-NIDQALLVVSAAEPDFSAHLLDRFLVLIEAKEIQPI 115 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I+L K+DLL E V+E + YR IGY+V+ SS T G++ + L + S+ AGQS Sbjct: 116 IILTKMDLLQGEAEQHVSEAIAAYRTIGYQVIETSSETLTGVESVRPLLKDKTSVLAGQS 175 Query: 217 GVGKSSLLNAL---LGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG-GDVIDSPGVRE 272 GVGKSSLLNAL L L+ T+ IS G G+HTT L P G G + D+PG Sbjct: 176 GVGKSSLLNALEPSLALE----TSHISKALGRGRHTTRHVTL--MPLGDGLIADTPGFSN 229 Query: 273 FGLWH-LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 H +E E++ F EF CKYR C H +PGCA+++AVE +I +R+ NY Sbjct: 230 LDFPHEMELEELRWCFPEFVALQDDCKYRGCLHLNEPGCAVKQAVEAHEIMSSRYTNYGM 289 Query: 332 ILESMAQVKTRK 343 +E + +TR+ Sbjct: 290 FVEEIKN-RTRR 300 >UniRef50_A8FD43 Putative ribosome biogenesis GTPase rsgA n=131 Tax=Firmicutes RepID=RSGA_BACP2 Length = 298 Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 25/305 (8%) Query: 45 ISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIVEAV 100 +S F D G V +C R R + + GD VV++ + +G + V Sbjct: 10 LSGFYYVLDESQESGKVVQCRARGIFRKNKITPLVGDYVVYQADN------DKEGYLLEV 63 Query: 101 HERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVL 159 ERT+ L RP PI+ N+DQ V+V SA P S +++DR+LV E IEPII + Sbjct: 64 KERTNELVRP-------PIS-NVDQAVLVFSAAEPTFSTSLLDRFLVLVEANHIEPIICI 115 Query: 160 NKIDLLD-DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 K+DLL DE + D YR IGY V + S+ DG++ L +I++FAGQSGV Sbjct: 116 TKMDLLKTDEERETIMAYADDYRQIGYEVHLTSTIEGDGIEKLTPHFHNKITVFAGQSGV 175 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKSSLLNA+ + + T+DIS + G G+HTT L +G + D+PG + Sbjct: 176 GKSSLLNAM-SPELALKTDDISSHLGRGKHTTRHVELIRTANGL-IADTPGFSSLEFTGI 233 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 E E + F++ D G CK+R C H +PGCAI++AVE +I E R+++Y LE + + Sbjct: 234 EAEDLGLYFLDIRDRSGDCKFRGCLHVKEPGCAIKDAVEHDQIKEYRYQHY---LEFLTE 290 Query: 339 VKTRK 343 +K RK Sbjct: 291 IKDRK 295 >UniRef50_A4J589 Ribosome small subunit-dependent GTPase A n=3 Tax=Clostridiales RepID=A4J589_DESRM Length = 292 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 108/309 (34%), Positives = 165/309 (53%), Gaps = 27/309 (8%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR-----SLVTGDRVVWRPGKPAAEGVNVKG 95 EG++I +G V+ D ++ C++R R + GDRV+ P + G Sbjct: 3 EGVLIRAYGGFYYVKKGD-EIWECSLRGKFRLGKSSPALVGDRVMVTPVRQNT------G 55 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIE 154 ++ V R + L RP ANIDQ VIV A+ PE ++ ++DR+LV E ++ Sbjct: 56 RIDEVMPRKTELFRP--------AVANIDQAVIVFAVENPEPNMTLLDRFLVLAENAEVL 107 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 P++ LNK DLL +E + +Y+ IGY ++ S+ +G+ L + L G+ ++FAG Sbjct: 108 PVVCLNKGDLLTSRRD---HEWLKLYKRIGYPTIITSTKLGEGINELRQLLIGKTTVFAG 164 Query: 215 QSGVGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 SGVGKSSLLNA+ GL E+ T DIS G+HTT L GG V+DSPG Sbjct: 165 PSGVGKSSLLNAIQPGL--ELKTGDISHKLKRGKHTTRHVELLPLNKGGYVVDSPGFSSL 222 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 L + E + F EF ++ CK+ C H +P CA+++A++ G I + R++NY L Sbjct: 223 DLPQMNKEDLAYYFPEFTGFIADCKFNGCLHHREPQCAVKDALDAGLINKERYQNYLLFL 282 Query: 334 ESMAQVKTR 342 E + Q + R Sbjct: 283 EEVLQQERR 291 >UniRef50_C0YJK5 GTP-binding protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJK5_9FLAO Length = 308 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 87/226 (38%), Positives = 138/226 (61%), Gaps = 4/226 (1%) Query: 119 IAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQM 177 IA+NID + + PE SL +DR+L CE I P+I+ NKID+L +E + V + Sbjct: 85 IASNIDLACFIFTLKHPETSLGFLDRFLACCEAYNITPLILFNKIDVLHEEEIEIVKDIE 144 Query: 178 DIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL-GLQKEILT 236 +Y+ IGY L +SS+++ L L+E L + S+F G SG GKS+L+NAL GL + T Sbjct: 145 FLYQEIGYNTLEISSYSKLNLDQLQEILKDKTSVFFGHSGCGKSTLVNALQPGLN--LKT 202 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 ++ISD G+HTTT A+++ + GG+VID+PGVREF + +E E++ F E Sbjct: 203 SEISDTHLKGKHTTTFAQMHFWDFGGNVIDTPGVREFAMIDIEKEEVQHYFPEIFKKREE 262 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 CK+ +C H +P CA+ +A+E G+I +R+ Y ++++ + + Sbjct: 263 CKFHNCLHVNEPKCAVIDALETGEIQHSRYATYIKLMDEAEEASQK 308 >UniRef50_C1ZE03 Ribosome small subunit-dependent GTPase A n=2 Tax=Planctomyces RepID=C1ZE03_PLALI Length = 375 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 109/305 (35%), Positives = 164/305 (53%), Gaps = 27/305 (8%) Query: 42 GIVISRFG-MHADVESADGDVHRCNIRRTIRSL--------VTGDRVVWRPGKPAAEGVN 92 G V+S G V+ DG C++RR +R++ V GD+V W Sbjct: 80 GRVLSSVGSTQCTVQVEDGRRFMCSVRRIVRTVARETRNAVVAGDKV-W-----ITASDE 133 Query: 93 VKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETL 151 G++E V R VL+R + + AN+ Q++IV SA P L +IDR+LV+ Sbjct: 134 TTGVIERVEPREGVLSR-GHQNREHILVANVSQMLIVGSAAQPNLKPALIDRFLVSAGKG 192 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISI 211 + PI+ +NKIDL+D + + + Y IG V+M S T G+ L + L ++ Sbjct: 193 GVHPIVCVNKIDLVDPVELVSL---LGWYSQIGCDVVMTSVTTGYGVDRLRQLLKNEQTV 249 Query: 212 FAGQSGVGKSSLLNAL---LGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 FAGQSGVGKSSLLNA+ L LQ T +S+ + G+HTT +L GG V+D+P Sbjct: 250 FAGQSGVGKSSLLNAVQPGLSLQ----TGQVSEVTQKGKHTTRYTQLLPLIEGGWVVDTP 305 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G+R+ LW + PE+I FVEF ++ LC++ C+H + CA+ AV+ I R+E+ Sbjct: 306 GIRQMELWDVRPEEIEGYFVEFRPFVALCRFPSCRHYREEDCAVIRAVQMDLIPRVRYES 365 Query: 329 YHRIL 333 Y R++ Sbjct: 366 YLRMM 370 >UniRef50_D2MKL2 GTPase EngC n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKL2_9BACT Length = 324 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 106/304 (34%), Positives = 163/304 (53%), Gaps = 25/304 (8%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRSL---VTGDRVVWRPGKPAAEGVNV------ 93 ++ +R G + DV+ D + RC +R T++ TG R+ P A G V Sbjct: 19 VIRARTGFY-DVQHGD-IILRCTLRGTLKRRNRSETGRRLY---ADPVAVGDWVIFTQLD 73 Query: 94 --KGIVEAVHERTSVLTRPDFYDGV-----KPIAANIDQIV-IVSAILPELSLNIIDRYL 145 +G++E + R + +R Y G + I AN QIV +VS ++P L+ +DR+L Sbjct: 74 MEEGVIEDILPRRTKFSRQ--YAGRHEDIEQVIVANAHQIVAVVSTLMPPLNFRTLDRFL 131 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 + E +E ++ LNK+DL+D+ + +Y +GY V+ S + + L L AL Sbjct: 132 ILAEAGDMEAVVCLNKMDLVDEAQRTELTATFAVYEKLGYGVIYTSINVPESLDALRNAL 191 Query: 206 TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 + S+ G SGVGKSSLLNAL ++ T ++ + G+HTTT + GG+V Sbjct: 192 KDKFSVIVGASGVGKSSLLNALQP-SLDLRTGEVGIRTQKGRHTTTLVERFPLDIGGEVA 250 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG+RE GLW ++ E + F E YLG CKY DC H +P CAI++AVE G+I R Sbjct: 251 DTPGIREVGLWGVDTENLEYYFPEMEPYLGTCKYNDCAHVAEPDCAIQDAVEAGEIHTER 310 Query: 326 FENY 329 + +Y Sbjct: 311 YRSY 314 >UniRef50_C7HYF6 Ribosome small subunit-dependent GTPase A n=1 Tax=Thiomonas intermedia K12 RepID=C7HYF6_THIIN Length = 321 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 111/335 (33%), Positives = 163/335 (48%), Gaps = 24/335 (7%) Query: 13 RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS 72 R N + +++K P L ++ FG H + DG V C R Sbjct: 6 RHNPQRPKGKRSTKSAPSTASGLTAR-----IVGAFGRHYLAQLDDGSVLACVPRGKRAE 60 Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI 132 +V GDRV PG + +E VH R + L R D + K AAN+D++++V+A Sbjct: 61 VVCGDRVTLAPG-------DAPLAIEQVHARRNALWREDLWRS-KMFAANLDRVMLVTAT 112 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS 192 P + +I R L+A + I ++LNK DL A +M +YR++GY +L +S Sbjct: 113 YPGIQHGLIGRALIAADAADIPSTLLLNKCDLPQ---AAAARAEMRLYRDLGYELLELSV 169 Query: 193 HT--QDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTT 250 T Q L L L+G+ ++ G SGVGKSSL N LL Q + T +IS+ G+HTT Sbjct: 170 RTEPQAALAALTPRLSGQTTLLLGASGVGKSSLTN-LLAPQAQAPTREISEALSAGKHTT 228 Query: 251 TAARLYH---FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD 307 TA RLY FP G ++DSPG + FGL HL Q+ GF E G C++++C H + Sbjct: 229 TATRLYDLPGFPPGSVLMDSPGFQSFGLHHLSVSQLQHGFPEIRARNGQCRFQNCTHRDE 288 Query: 308 PGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 PGC + I+ +R Y + + R Sbjct: 289 PGCVF--TTDPQAISASRLALYRTLYAELTSAAPR 321 >UniRef50_O66555 Putative ribosome biogenesis GTPase rsgA n=7 Tax=Bacteria RepID=RSGA_AQUAE Length = 302 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 146/240 (60%), Gaps = 14/240 (5%) Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 +E V ER ++L RP AN+D+++IV + +PE + ++D LV E ++EP Sbjct: 62 IEEVEERKNLLIRPK--------VANVDRVIIVETLKMPEFNNYLLDNMLVVYEYFKVEP 113 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +IV NKIDLL++E + IYR+ GY VL VS+ T +G+ L + L G I I AG Sbjct: 114 VIVFNKIDLLNEEEKKELERMDSIYRDAGYDVLKVSAKTGEGIDELVDYLEGFICILAGP 173 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF-G 274 SGVGKSS+L+ L G +E+ T ++S+ + G+HTTT RL F G V D+PG + Sbjct: 174 SGVGKSSILSRLTG--EELRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTPGFSKVEA 231 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 ++P ++ F EF Y CKY DC H +PGCA++EAV+ G+I+ R+++Y +I++ Sbjct: 232 TMFVKPREVRNYFREFLRY--QCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIK 289 >UniRef50_C6X5X0 Ribosome small subunit-stimulated GTPase EngC n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5X0_FLAB3 Length = 309 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 87/221 (39%), Positives = 136/221 (61%), Gaps = 9/221 (4%) Query: 119 IAANID-QIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQM 177 IA+NID I + PE SL +DR+L CE I+P+I+ NK+D+L ++ V Sbjct: 85 IASNIDVACFIFTLKFPETSLGFLDRFLACCEAYNIQPLILFNKMDVLSEDEKELVQHIE 144 Query: 178 DIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL---LGLQKEI 234 IY+NIGY+ L +SS++Q L+ L+ L ++S+F G SG GKS+L+NAL L L+ Sbjct: 145 AIYQNIGYQTLEISSYSQLNLEALQAILKDKVSVFFGHSGSGKSTLVNALQPDLNLK--- 201 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T++IS + G+HTTT A+++ + GG VID+PGVREF + ++ E+I F E Sbjct: 202 -TSEISASQLKGKHTTTFAQMHFWHFGGSVIDTPGVREFAMIDVQKEEIQHYFPEIFALG 260 Query: 295 GLCKYRDCKHDTDPGCAIREAVEE-GKIAETRFENYHRILE 334 CK+ +C H +P CA+ ++ G + ETR++ Y +++E Sbjct: 261 RNCKFHNCMHINEPKCAVTADLDSGGDLEETRYQTYLKLME 301 >UniRef50_A7Z4J8 Putative ribosome biogenesis GTPase rsgA n=31 Tax=Bacilli RepID=RSGA_BACA2 Length = 296 Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 108/310 (34%), Positives = 168/310 (54%), Gaps = 22/310 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVK 94 P+ I+ + G + ++ + + +C R R + + GD V++ AE + + Sbjct: 2 PEGKIIKALSGFYYVLDESQDKIIQCRGRGIFRKNKITPLVGDYAVYQ-----AEN-DKE 55 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQI 153 G + + ERT+ L RP PI+ N+DQ V+V SA+ P S +++DR+LV E I Sbjct: 56 GYLLEIKERTNELIRP-------PIS-NVDQAVLVFSAVQPAFSTSLLDRFLVLVEANGI 107 Query: 154 EPIIVLNKIDLL-DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 PII + K+DL D E + + Y+ IGY V + SS GL + + + ++F Sbjct: 108 HPIICITKMDLAADGESKEAILSYVKDYQAIGYDVYVTSSKENSGLTGIVKHFENKTTVF 167 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AGQSGVGKSSLLNA+ + E+ TN+IS + G G+HTT L H GG V D+PG Sbjct: 168 AGQSGVGKSSLLNAI-SPELELKTNEISTHLGRGKHTTRHVELIH-TSGGLVADTPGFSS 225 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 +E E++ F E + CK+R C H +P CA+++AVEEG+I R+E+Y Sbjct: 226 LEFTGIEEEELGSTFPEIREISASCKFRGCLHLKEPKCAVKQAVEEGEIQPYRYEHYKEF 285 Query: 333 LESMAQVKTR 342 ++ + + K R Sbjct: 286 MQEIKERKPR 295 >UniRef50_D2QSL3 Ribosome small subunit-dependent GTPase A n=2 Tax=Flexibacteraceae RepID=D2QSL3_9SPHI Length = 308 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 106/305 (34%), Positives = 167/305 (54%), Gaps = 18/305 (5%) Query: 42 GIVISRFGMHADVESADGDVHR--------CNIRRTIRSLVTGDRVVWRPGKPAAEGVNV 93 G+VI G ++ + DG + + + + GDRVV+ A Sbjct: 4 GLVIRSTGSWYEIRNPDGHIFQGRLKGKFKLKGLKVTNPIAVGDRVVFDVEDEAEN---- 59 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAI-LPELSLNIIDRYLVACET 150 I+ + R + + R + +AANIDQ V+++ + +P S IDR+LV+ E+ Sbjct: 60 TAIITDISPRDNYIIRQSVHKTAHGHILAANIDQAVLLATLAMPRTSAGFIDRFLVSAES 119 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 +I IV NKID+L++EG+AF E +D+Y IGY L S+ G++ E L +++ Sbjct: 120 FRIPTTIVFNKIDILNEEGLAFQQEIIDLYERIGYNCLSTSATEGVGVEAFRELLDQKVT 179 Query: 211 IFAGQSGVGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 + AG SGVGKSSL+NA+ GL + TN++S + G HTTT A ++ +ID+PG Sbjct: 180 LVAGHSGVGKSSLVNAIAPGLN--LRTNEVSSFANKGVHTTTFAEMFELSPNTFIIDTPG 237 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 ++E GL +I F E D L C++ +C H +PGCAI+EAV E +IAE+R+ +Y Sbjct: 238 IKELGLMDTSKTEIGHYFPEMRDRLNQCRFNNCLHINEPGCAIKEAVAEEEIAESRYMSY 297 Query: 330 HRILE 334 ++E Sbjct: 298 LSMIE 302 >UniRef50_D1BMC8 Ribosome small subunit-dependent GTPase A n=3 Tax=Veillonella RepID=D1BMC8_VEIPT Length = 287 Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 162/309 (52%), Gaps = 34/309 (11%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIV 97 GIV+ + V+ G +H C +R ++ SL+ GDRV ++ G V Sbjct: 4 GIVVKNMNGYFYVQDDTGTIHECKVRGRLKKGRYSLLVGDRVT----------ISEDGFV 53 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIV-IVSAILPELSLNIIDRYLVACETLQIEPI 156 E++H R + + V+P ANIDQ+V +V+A P+++ ++++ LV E I + Sbjct: 54 ESIHGRHNSM--------VRPAVANIDQVVLVVAAHEPDINELLLNKMLVMIEHADIPIV 105 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 + +NK DL+D E V D+Y++IGY+VLM S++ G+ L L +++ FAG S Sbjct: 106 LCINKCDLMDSETETMV----DLYKSIGYKVLMTSTYNMTGIDDLRHVLQHKVTAFAGPS 161 Query: 217 GVGKSSLLNAL---LGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GVGKSSLLNA+ Q T ++SD G+HTT A LY ++D+PG Sbjct: 162 GVGKSSLLNAVDPKFAFQ----TGEVSDKIKRGKHTTRHASLYSLDADSFIMDTPGFSAI 217 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + E++ F EF +Y+ CK+ C H+ +P C I+ A+E G I + R++ Y I Sbjct: 218 EFNDVSLERLPTLFPEFGEYVDTCKFSPCYHEHEPICGIKAALEAGHIHQGRYDAYMSIR 277 Query: 334 ESMAQVKTR 342 + + R Sbjct: 278 NDIESQRKR 286 >UniRef50_A9WK24 Ribosome small subunit-dependent GTPase A n=6 Tax=Chloroflexi (class) RepID=A9WK24_CHLAA Length = 324 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/221 (41%), Positives = 127/221 (57%), Gaps = 9/221 (4%) Query: 119 IAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQM 177 I AN+DQ+++V S PE + ++DRYLV CE ++ +IV KIDL+ Sbjct: 105 IVANVDQVLLVFSCTKPEFTPRMLDRYLVICEHSELPVVIVATKIDLVVQHA---AEAMF 161 Query: 178 DIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL-GLQKEILT 236 Y IGY V S + +G+ L L GRIS+ G+SGVGKSSLLNA+ GL + T Sbjct: 162 SPYARIGYPVFYTSIVSGEGIAELRSQLAGRISVVTGKSGVGKSSLLNAIQPGLN--LRT 219 Query: 237 NDISDNSGLGQHTTTAARL--YHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 +IS+ G+HTTT A L P GG V D+PG+RE GLW++ + F EF +L Sbjct: 220 GEISERLTKGRHTTTVAELIPLDLPGGGYVADTPGIREIGLWNVPERDLAWCFREFRPFL 279 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 C + C H +P CA+R AVE G I R+++Y R++ES Sbjct: 280 DDCYFAGCTHLHEPHCAVRAAVERGDITAARYDSYARLMES 320 >UniRef50_C9LUJ5 Ribosome small subunit-dependent GTPase A n=2 Tax=Selenomonas RepID=C9LUJ5_9FIRM Length = 300 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/250 (38%), Positives = 153/250 (61%), Gaps = 17/250 (6%) Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQI 153 G++E ER S+L RP + ANIDQ+V+V +A P+++ +IDR+LV E +I Sbjct: 60 GVIERRCERKSLLRRP--------LVANIDQVVLVFAAREPDINPVLIDRFLVLAEWSKI 111 Query: 154 EPIIV-LNKIDLLD-DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISI 211 E I++ +NK+DLL+ DE A + +YR IGY V ++S+ T +G+ ++ + + S+ Sbjct: 112 ERIVLCINKMDLLEGDE--AEIPALAALYREIGYPVCLLSTVTGEGVADMQSLVEEKTSV 169 Query: 212 FAGQSGVGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 FAG SGVGKSSLLN L G+ + T +S+ G+HTT A+L F GG ++D+PG Sbjct: 170 FAGSSGVGKSSLLNCLAPGIA--LSTGAVSEKIKRGRHTTRTAQLLPF-AGGFLVDTPGF 226 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 L +EP + F EF + G C+++ C H +PGCA++EAV+ G+I ++R+ +Y Sbjct: 227 SATELAEIEPCALPGLFPEFRSFFGACRFQPCTHSHEPGCAVKEAVQAGRIEDSRYASYL 286 Query: 331 RILESMAQVK 340 +L+ Q K Sbjct: 287 EMLQQSVQRK 296 >UniRef50_A4SW79 Ribosome small subunit-dependent GTPase A n=2 Tax=Polynucleobacter necessarius RepID=A4SW79_POLSQ Length = 337 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/247 (38%), Positives = 141/247 (57%), Gaps = 15/247 (6%) Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 I+E + R ++L R D + K IA+N+DQI+IV A P S +++ R +VA ET QI Sbjct: 65 IIE-IEPRENLLYRSDAFKS-KLIASNVDQILIVLATQPAFSPDLLGRAVVAAETNQIGL 122 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG-LKPLEEALTGRISIFAG 214 I+LNK DL D+ + + + Y +GY V VS+ + L+ AL G++S+F G Sbjct: 123 HILLNKCDLPDN--IEHARKIIAPYARMGYPVSEVSAKFDPASIDALQSALKGKVSVFVG 180 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG---------GDVI 265 QSG+GKSSLLNA + LT + S G+HTTTA R + P G +I Sbjct: 181 QSGMGKSSLLNAWVP-NAAALTQEYSVRLDTGKHTTTACRYFELPESWGRDASGKLGALI 239 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 DSPG +EFGL H+ ++ F EF D LG C++ +C H ++P CA+R AV+ +IA R Sbjct: 240 DSPGFQEFGLAHMSVSELQHAFREFKDLLGKCRFHNCAHQSEPDCAVRAAVDRNEIAPER 299 Query: 326 FENYHRI 332 + ++ Sbjct: 300 LALFRQL 306 >UniRef50_C9R7Y8 Ribosome small subunit-dependent GTPase A n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y8_AMMDK Length = 292 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 101/278 (36%), Positives = 150/278 (53%), Gaps = 19/278 (6%) Query: 80 VW---RPGKPAAEGVNVKGIVE--AVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAI 132 VW R GK A E + V +VE + E VL + P + +P AN++Q ++V A Sbjct: 23 VWTALRRGKLAEEKILVGDLVEFSPLDEERGVLEKVLPRKTELYRPPVANVEQALLVFAF 82 Query: 133 L-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS 191 P+ + ++DR+LV ++ +I+PII NK+DL E+ Y G+ L VS Sbjct: 83 TEPDPNFKLLDRFLVLSQSAKIKPIICFNKLDLASP---GLYQEERRAYEEAGFVFLAVS 139 Query: 192 SHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL---LGLQKEILTNDISDNSGLGQH 248 + T GL+ L+ L+ R+++ AG SGVGKSSLLNA+ L LQ T +S +G G+H Sbjct: 140 AKTGQGLEELKRHLSHRVTVLAGPSGVGKSSLLNAIQPGLKLQ----TAPVSRKTGRGRH 195 Query: 249 TTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP 308 TT L GG V+D+PG L + P ++ F E C++ DC H +P Sbjct: 196 TTRLVELLPLDIGGLVVDTPGFTSLDLPDIPPASLSAYFPEIARVGAGCRFSDCLHQAEP 255 Query: 309 GCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 GCA+REAV EGKI R+++Y L + + + R+ FS Sbjct: 256 GCAVREAVAEGKIPRFRYQHYLVFLGEILE-RERRKFS 292 >UniRef50_A6GEV4 Ribosome-associated GTPase n=2 Tax=Deltaproteobacteria RepID=A6GEV4_9DELT Length = 340 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 113/320 (35%), Positives = 164/320 (51%), Gaps = 32/320 (10%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGV 91 +D++ GEP G++++ G+ DV G+ +RR+ V GDRV Sbjct: 34 EDDVAGEP--GVLVAHHGVAVDVRLRGGERRPVKVRRS-SGHVVGDRV------------ 78 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 V G ER S L R D V +AAN+D + IV A P IDR LV+ + Sbjct: 79 EVFGERLRRLERDSELRRRDAMGRVHVVAANLDVLGIVVAPKPGPPAGFIDRALVSAASS 138 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG---YRVLMVSSHTQDGLKPLEEALT-- 206 I+P++++NK DL D G + G +L VS+ T +GL+ + L Sbjct: 139 GIQPLLIVNKADL-DGAGALVAAVRRTFVEGPGGVDLPLLEVSAKTGEGLEAILRFLAQG 197 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 F G SGVGKSSL+N LL + E+ I++ SGLG+HTTT A L+ GG++ID Sbjct: 198 PHRGAFVGTSGVGKSSLVNTLL-PEVELEVGAINELSGLGRHTTTTATLHPLSGGGELID 256 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLG----------LCKYRDCKHDTDPGCAIREAV 316 +PG R+FGL + ++++ F F D LG C++ DC+H +PGCAI EAV Sbjct: 257 TPGFRDFGLVDIGVRELSRFFPGFADILGTDASGHDSKHACRFNDCRHLVEPGCAILEAV 316 Query: 317 EEGKIAETRFENYHRILESM 336 EG +A R+E Y +L + Sbjct: 317 AEGALARARWERYRDLLTEL 336 >UniRef50_C9LLK1 Ribosome small subunit-dependent GTPase A n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK1_9FIRM Length = 288 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 169/304 (55%), Gaps = 23/304 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS---LVTGDRVVWRPGKPAAEGVNVKGIV 97 EG V+ + + + + RC R ++ ++ GD V + K +G++ Sbjct: 2 EGTVLKDQNGYFTILGNNQVLTRCRSRGALKKKTDVLVGDHVEYEANK------GFEGVI 55 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPI 156 V++R + L RP P++ N+D++V+VS+I P+L+ ++D+ ++ E + P+ Sbjct: 56 TKVYKRKNQLYRP-------PVS-NVDELVLVSSICTPDLNRGLLDKMILLAENANMPPV 107 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I +NK DL D+ V E+ Y GY + S++TQDGL L++ L GRI +F+G S Sbjct: 108 ICINKCDL-DEVSAKRVCEE---YEKAGYPCVYTSTYTQDGLDDLKKLLRGRIIVFSGPS 163 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKSS+LN LG + + +S +G G+ TT A L F G ++D+PG + Sbjct: 164 GVGKSSILNYFLG-RSYFTSGAVSAYTGKGRATTRHAELVPFKTGVFLMDTPGYTLLDID 222 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 L+ +++ F +F YLG C + +C+H ++P CAIR+A+E+G + + R+E+Y +I + + Sbjct: 223 LLDIDELGFLFKDFRPYLGKCYFNNCRHISEPKCAIRKAIEDGVVQKRRYESYLQIFQKL 282 Query: 337 AQVK 340 K Sbjct: 283 KYSK 286 >UniRef50_D1YX46 Probable GTPase EngC n=2 Tax=Euryarchaeota RepID=D1YX46_METPS Length = 358 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 88/253 (34%), Positives = 148/253 (58%), Gaps = 12/253 (4%) Query: 97 VEAVHERTSVLTRPDF--YDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 V+A+ R S ++R D G + IA N+D IV+++ +L+L ++RYL +E Sbjct: 80 VQAILPRRSKISRKDAGRVTGEQVIATNVDTAFIVTSLNKDLNLRRLERYLAVARQNAVE 139 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNI--GYRVLMVSSHTQDGLKPLEEALT-GRISI 211 PIIVLNK D+ D ++ ++ ++I G + +S+ + GL+ L + G+ + Sbjct: 140 PIIVLNKSDVCPD-----IDGSLNDVKSIAPGVPIFAISAIQKTGLEQLSPYMKEGKTIV 194 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 G SGVGKS+++NAL G ++ + DI ++ G+HTTTA L GG +ID+PG+R Sbjct: 195 LLGSSGVGKSTIINALEGYGRQKI-GDIREDDSRGRHTTTARELIIMESGGVIIDNPGMR 253 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 E LW + I + F + + CK+ DC+H+T+PGCAI+ A++EG + E RFE+Y + Sbjct: 254 ELQLWD-ATDGIAETFQDIEELSRQCKFSDCQHETEPGCAIKRAIKEGTLPEARFESYQK 312 Query: 332 ILESMAQVKTRKN 344 + + +K +K+ Sbjct: 313 LQRELLALKRKKD 325 >UniRef50_B6YS07 Putative ribosome biogenesis GTPase rsgA n=16 Tax=Bacteroidetes RepID=RSGA_AZOPC Length = 311 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 137/229 (59%), Gaps = 3/229 (1%) Query: 119 IAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQM 177 IA N+DQ +IV+ P + IDR+LV E +I ++ NK DL ++ M + + + Sbjct: 84 IATNLDQAFLIVTVNYPITTTIFIDRFLVTTEAYRIPTLLFFNKTDLYNNHDMNYADILI 143 Query: 178 DIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 +Y++IGY +++ + L +E+ L G+I++F G SGVGKS+++N L+ K+ + Sbjct: 144 HLYKSIGYSCYKIAATKDEDLLFMEKLLRGKITLFYGHSGVGKSTIVNRLIPNAKQKV-Q 202 Query: 238 DISDNSGLGQHTTTAARLYHFPHG-GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 IS + G HTTT +++ P G +ID+PG++ FG++ +E E+I+ F + + Sbjct: 203 SISKHHNKGMHTTTFSKMLELPSSSGYIIDTPGIKGFGIFDIEKEEISHYFPDIFRFSPY 262 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNF 345 CK+ +C H +P CA+REA++ I+++R+ +Y ILE + K R+ F Sbjct: 263 CKFYNCTHQKEPACAVREAIKNHYISKSRYISYINILEDVDMNKYREAF 311 >UniRef50_Q3AC25 Putative ribosome biogenesis GTPase rsgA n=9 Tax=Clostridia RepID=RSGA_CARHZ Length = 290 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 97/303 (32%), Positives = 158/303 (52%), Gaps = 24/303 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 EG+V+ + V++ ++ C R + ++TGDRV+ R P +EGV Sbjct: 2 EGLVVKNYAGFYYVDTGKA-IYMCKARGKFKKDNIKILTGDRVIIRELVPNSEGV----- 55 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEP 155 +E++ R + L RP PIA N+DQ+++V A P S +IDR LV L++E Sbjct: 56 IESLLPRKNELIRP-------PIA-NVDQVLLVFAFADPFPSTELIDRLLVMAYALRLEV 107 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++V NK DL++ E + + Y+ I +V+ +++ G+ L + L +IS+ AG Sbjct: 108 VLVFNKFDLVNPES----QKLFEYYKKILPKVVAITARGDTGIDELTDYLNQKISVLAGP 163 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKS+L+N L+ K + T ++S G+HTT L P GG + D+PG L Sbjct: 164 SGVGKSTLINRLVPGAK-LATGEVSPKIKRGRHTTRHVELIKLPFGGFIADTPGFSNLTL 222 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 ++ ++ F EF+ C + +C H +P C +RE +E G+I R+ENY LE Sbjct: 223 PEMDKLELQSYFPEFNQNRKYCYFPNCLHVKEPNCRVRELLETGEIPPFRYENYLTFLEE 282 Query: 336 MAQ 338 + Sbjct: 283 ITS 285 >UniRef50_Q71YJ7 Putative ribosome biogenesis GTPase rsgA 1 n=23 Tax=Bacillales RepID=RSGA1_LISMF Length = 291 Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 156/292 (53%), Gaps = 25/292 (8%) Query: 57 ADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDF 112 ++G V++C R R S + GD V ++ G + V R + L RP Sbjct: 18 SEGKVYQCRARGNFRKRNISPLVGDDVEFQIEN------KTDGYILDVMSRENALVRP-- 69 Query: 113 YDGVKPIAANID-QIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMA 171 P+A NID I++ SA+ P+ S N+ DR+LVA E I+P+I ++K+DL + Sbjct: 70 -----PVA-NIDIAILVFSAVEPDFSTNLADRFLVAIEKEDIKPVICISKMDLASESEKE 123 Query: 172 FVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ 231 + DIY IGY V + + + +++ ++G+ ++ AGQSGVGKS+LLN+L Sbjct: 124 QIAVYKDIYEAIGYDVFVTNDEPDK--EAIKDYISGKTAVIAGQSGVGKSTLLNSL-NSD 180 Query: 232 KEILTNDISDNSGLGQHTTTAARLYHFPHG-GDVIDSPGVREFGLWHLEPEQITQGFVEF 290 + T +IS+ G G+HTT L P G G V D+PG L+PE + F E Sbjct: 181 LTLKTAEISNALGRGKHTTRHVEL--MPIGDGFVADTPGFSSIEWDDLQPETLQFCFPEM 238 Query: 291 HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 D CK+R C HD +P CA++ AVE +IAE R+++Y +IL+ + K R Sbjct: 239 EDRRSGCKFRGCMHDNEPNCAVKTAVEANEIAEFRYKHYIQILQELKNRKPR 290 >UniRef50_B8I262 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Clostridium RepID=RSGA_CLOCE Length = 305 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 101/296 (34%), Positives = 155/296 (52%), Gaps = 27/296 (9%) Query: 60 DVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG 115 D+ C R R + + GDRV G +G G ++ + R+S L Sbjct: 23 DIFECKPRGVFRKNSVTPLPGDRV----GFSIIDGDKKLGNIDEILPRSSEL-------- 70 Query: 116 VKPIAANIDQI-VIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 V+P AN+DQI +IV+A P ++D+ L+ ET I +I +NKIDL DD N Sbjct: 71 VRPAVANVDQIAIIVAAKAPNPDYMLLDKLLITAETRNIRVLICVNKIDLDDDTAKIVRN 130 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 Y GY V+ +SS G K L+E L G I++FAGQSGVGKS++LN ++ + + Sbjct: 131 A----YSPAGYDVIEISSVRNIGYKRLKEELKGHITVFAGQSGVGKSTILNHIM--ESWV 184 Query: 235 L-TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDY 293 + T +S+ G+HTT A L +GG V D+PG F + + Q+ + + EF Y Sbjct: 185 METGSVSNKIERGKHTTRHAELLELKYGGYVADTPGFSSFEIIDIPYNQLERYYPEFLPY 244 Query: 294 LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY---HRILESMAQVKTRKNFS 346 + C++ C H T+PGC + EA+E +I R++ Y ++ L+ + Q K +K S Sbjct: 245 INTCRFNSCSHITEPGCRVIEALERSEIDNNRYQRYIQLYKALKDIPQYKGKKTES 300 >UniRef50_Q03FX9 Putative ribosome biogenesis GTPase rsgA n=25 Tax=Lactobacillales RepID=RSGA_PEDPA Length = 309 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 102/317 (32%), Positives = 158/317 (49%), Gaps = 25/317 (7%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIV 97 G +I DV + D + R R R S + GD V ++ E N G + Sbjct: 4 GQIIQLLAGFYDVLTEDHKIVRTRARGNFRNQKTSPLVGDMVDFK------ESENDTGYI 57 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPI 156 +H R + L RP P+A NIDQ VIV+A P S N++DR LVA IE I Sbjct: 58 TKIHTRENELVRP-------PLA-NIDQAVIVTAATEPSFSANLLDRQLVALAEKHIEAI 109 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLM-VSSHTQDGLKPLEEALTGRISIFAGQ 215 + +K DLL + + Y+ IGY+V+ +SS L L+E+ +++IF GQ Sbjct: 110 LYFSKTDLLSPTEFQDLQKIAGYYQKIGYQVIFPISSQPDADLIELKESFKNQLTIFMGQ 169 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 +G GKS+LLN + + I T ++S G+HTT L G V D+PG + + Sbjct: 170 TGAGKSTLLNRI-DSKLNIATGEVSQALNRGKHTTRKVSLIPI-EDGLVADTPGFSTYAV 227 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 + + Q+ + F++F C++R+C H +PGCA++ AVE+G + +R+ NY + +E Sbjct: 228 FEMADTQLKEYFIDFKKLSQNCRFRECLHLNEPGCAVKAAVEDGSVLSSRYANYEQFIEL 287 Query: 336 MAQVK---TRKNFSDTD 349 + K RK + D Sbjct: 288 IRNQKPEYKRKGYQKKD 304 >UniRef50_Q67PQ4 Putative GTPase n=1 Tax=Symbiobacterium thermophilum RepID=Q67PQ4_SYMTH Length = 292 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 13/249 (5%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQ 152 +G +E V R + L RP P+A N+DQ ++V ++ PE +DR LV E Sbjct: 53 EGRIEKVLPRRNCLERP-------PVA-NVDQCLVVFTLVEPEADYLFLDRVLVHVEQAG 104 Query: 153 IEPIIVLNKIDLLDDEGMA-FVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISI 211 +EP+I+LNKIDL+++ +A FV D+ +GYRVL +S+ GL L L G+ S+ Sbjct: 105 VEPLILLNKIDLVEEADVAAFVRLYGDL---VGYRVLPISAAEGRGLDELRRHLAGKTSV 161 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 AG SGVGKS L+ AL + ++ D+S S G+HTT L GG + D+PG Sbjct: 162 LAGHSGVGKSRLVRALEPQRADVRIGDLSAKSRKGRHTTRHVELIPLTGGGLLADAPGFT 221 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 ++ + F EF Y C+Y DC H +P CA+R+AVE G I E+R NY Sbjct: 222 YLEFQDIDKWTLRDCFREFARYQAECRYADCLHRKEPDCAVRDAVEAGAIPESRHRNYLM 281 Query: 332 ILESMAQVK 340 L+ + +K Sbjct: 282 FLDEVEAMK 290 >UniRef50_B2RLV5 Putative ribosome biogenesis GTPase rsgA n=28 Tax=Bacteroidales RepID=RSGA_PORG3 Length = 315 Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 157/312 (50%), Gaps = 27/312 (8%) Query: 41 EGIVISRFGMHADVESADGDVHRC----NIR----RTIRSLVTGDRVVWRP----GKPAA 88 +G+VI G V DG C N+R R+ + GDRV P G+PA Sbjct: 2 DGVVIKNTGSQYLVRCTDGTELYCMAKGNLRLKGIRSTNPVAVGDRVEIVPASQDGQPA- 60 Query: 89 EGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYL 145 ++ +H R + + R + + AN+D V+V I P + IDR+L Sbjct: 61 -------YIKRIHPRRNYIIRRASNLSKESHILGANLDAAVLVCTINDPVTTTVFIDRFL 113 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 E ++ I+ NKID E ++ +Y IGY VS+ T +GL L+ L Sbjct: 114 ATAEAYRVPVILAFNKIDCYTQEDRLQLDRLSAVYTAIGYPCCHVSAITGEGLPDLKSLL 173 Query: 206 TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH---GG 262 G++++ AG SGVGKSSL+NAL+ ++ T IS G HTTT +++ FP G Sbjct: 174 DGKLTLLAGHSGVGKSSLINALIP-HADLRTGAISQAHHTGMHTTTFSQMIDFPDLSPGS 232 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIA 322 +ID+PG++ FG + +++ F E C++ +C H +PGCA+ EA+ G+IA Sbjct: 233 ALIDTPGIKGFGTLEMGEYEVSHYFPEIFAASKGCRFGNCTHTHEPGCAVLEALRRGEIA 292 Query: 323 ETRFENYHRILE 334 E+R+ +Y ILE Sbjct: 293 ESRYISYLSILE 304 >UniRef50_B9ZJR5 Ribosome small subunit-dependent GTPase A n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJR5_9GAMM Length = 281 Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 153/291 (52%), Gaps = 20/291 (6%) Query: 52 ADVESA-DGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP 110 AD+ + D + R + R + L GDRV + A G ++ + R + L R Sbjct: 2 ADIAAPEDAEPRRIRLHRRQKDLACGDRV-----EMDAAGEQIQRRLP----RDNTLVRQ 52 Query: 111 DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGM 170 D + K IAANID + IV A P + +IDR+LVA L P I++NK D G Sbjct: 53 DGFGRRKVIAANIDTVWIVIAPSPMPARYLIDRFLVAVYNLPARPRILVNK----QDAGP 108 Query: 171 AFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL-- 228 A ++ + Y ++ L VS+ + GL L EA G +I GQSGVGKSSL+ ALL Sbjct: 109 AAPSDWLAPYAHLDLDPLHVSARSGYGLDALAEAARGHTNILIGQSGVGKSSLIAALLER 168 Query: 229 ---GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQ 285 G K T D++ SG G+HTT A+ Y GG IDSPGVR+F + + + Sbjct: 169 HGSGDIKLPETGDLA-ASGEGRHTTVTAQWYSLTGGGAWIDSPGVRDFTPELESIDALVR 227 Query: 286 GFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 GF + C++R+C+H T+PGCA+RE V++G + R E + +L ++ Sbjct: 228 GFPDIEALGEGCRFRNCRHQTEPGCAVREGVDQGTLPAARLEAWTALLGTL 278 >UniRef50_B0NH56 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH56_EUBSP Length = 292 Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 91/248 (36%), Positives = 136/248 (54%), Gaps = 13/248 (5%) Query: 96 IVEAVHER------TSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVAC 148 I+EA+ E T VL R + + V+P ANIDQ ++V AI+ P N++DR+LV Sbjct: 45 IIEALDEEQKTGNITEVLKRKN--ELVRPAVANIDQALVVFAIVRPNPHFNLLDRFLVMM 102 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E+ +I I+ NK D+ D V E IY N GY ++ S+ + ++E L G+ Sbjct: 103 ESKEIPVILCFNKEDIATDPQ---VKELEAIYENCGYPLIFTSALKDKNIDQVKEVLRGK 159 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 + AG SGVGKSS++N +L + + T IS G+HTT L+ ++D+P Sbjct: 160 TTAIAGPSGVGKSSIIN-ILQPEANMETGAISSKIERGKHTTRHTELFPVDADSYIMDTP 218 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G + E E++ F EF Y G CK+ C H +PGCA++EAVEEGKI + R++N Sbjct: 219 GFSSLYVNDFEKEELKYYFPEFAVYEGTCKFNGCDHIHEPGCAVKEAVEEGKIHKVRYQN 278 Query: 329 YHRILESM 336 Y + E + Sbjct: 279 YIEMYEEL 286 >UniRef50_B0VIG3 Putative GTPase YjeQ n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIG3_9BACT Length = 359 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 4/219 (1%) Query: 119 IAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQM 177 +AANIDQ++I S+ P +IDRYL ++PIIV+NKIDLL+DE + EQ Sbjct: 144 LAANIDQVIITSSWRKPRFKAGLIDRYLCIVAIQNLKPIIVINKIDLLEDEQE--LKEQT 201 Query: 178 DIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 Y +GY ++ S G++ L+E L + S+F G SG GK+SL+N L + T Sbjct: 202 AYYEAMGYPLICTSVVNGTGMQELKELLKNKDSVFTGHSGTGKTSLIN-YLEPSLNLPTA 260 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 ++SD + G+HTT+ + L + GG ++D+PG++ L + E I + F F C Sbjct: 261 EVSDRNEKGKHTTSQSILIPWSFGGHLLDTPGIKTITLHREDKEHIPKVFPGFERLYSKC 320 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 K+ DC+H + GCA+ EA+EEG I R+++Y + S+ Sbjct: 321 KFSDCRHINEDGCAVLEAMEEGIIPYERYDSYQYLYASL 359 >UniRef50_B0MPP3 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPP3_9FIRM Length = 298 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 107/303 (35%), Positives = 161/303 (53%), Gaps = 33/303 (10%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 EGI+ G + V ADG V CN R R S GD V+ + E V I Sbjct: 7 EGIITKAVGGNYYVAVADG-VLCCNARGVFRKEKISPCAGDNVIV-----SIEENAVPLI 60 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANID-QIVIVSAILPELSLNIIDRYLVACETLQIEP 155 VE + ER + + RP AN+D +++ SA+ P + + D+ + E+ IEP Sbjct: 61 VE-IKERKNHIIRPPL--------ANLDCALLVTSAVDPVPNTLVTDKLISIFESKHIEP 111 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +IV+ K DL + E A IYR G++V + + T +G+ + ++G++S G Sbjct: 112 VIVITKQDLRECEDFA------GIYRKCGFKVFYMDNSTGNGIDAIRSYISGKLSALIGN 165 Query: 216 SGVGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR--E 272 SGVGKSSL+N L GL++ T DIS G G+HTT A L+ GG + D+PG E Sbjct: 166 SGVGKSSLMNHLFPGLERS--TGDISKKLGRGRHTTRQAELFAI-DGGYIADTPGFSTVE 222 Query: 273 FGLWHLEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 + P+ ++ F EF +YLG C++RDC H + GCA+ EA+ EGKI +R+++Y + Sbjct: 223 VSRYGFIPKNELQYSFREFSEYLGKCRFRDCVHLKESGCAVTEALREGKINSSRYDSYVK 282 Query: 332 ILE 334 + E Sbjct: 283 MCE 285 >UniRef50_A6TRW0 Putative ribosome biogenesis GTPase rsgA n=15 Tax=Bacteria RepID=RSGA_ALKMQ Length = 292 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 80/255 (31%), Positives = 146/255 (57%), Gaps = 16/255 (6%) Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACET 150 N KG+++ + R + L RP AN+DQ+++V ++ P+ L+++D +L+ ET Sbjct: 53 NKKGMIDDIFPRKTELIRPT--------VANVDQVIVVFSVTQPDPHLSLLDHFLILAET 104 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 I+ +I LNK+DL+ E +A E + IY +GY V++ S + GL+ LE+ L G+ + Sbjct: 105 QNIDVVICLNKLDLVQREDVA---ELVGIYEKVGYPVILTSQNDSIGLEQLEKVLRGKTT 161 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 +FAG SGVGKS+LLN +L + T ++S G+HTT L G V+D+PG Sbjct: 162 VFAGPSGVGKSTLLNRILP-HVTLQTGELSSKIARGKHTTRHVELISLETEGWVVDTPGF 220 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 + L+ E++ F++F + C++ C H +P C ++ A++ G++ ++R+ +Y Sbjct: 221 SSLNIDFLKEEELADYFIDFEPFAKDCRFLSCVHLNEPICGVKTALKAGQLVQSRYNSY- 279 Query: 331 RILESMAQVKTRKNF 345 L+ + ++K + + Sbjct: 280 --LQMIGEIKKNRRY 292 >UniRef50_A3CQN2 GTPase, putative n=3 Tax=Streptococcus RepID=A3CQN2_STRSV Length = 213 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/216 (40%), Positives = 132/216 (61%), Gaps = 16/216 (7%) Query: 129 VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL 188 +SA P+ + N++DR+LV E +I PII ++K+DLL+DE V Q Y++IGY V+ Sbjct: 1 MSAKEPDFNANLLDRFLVLLEHKRIHPIIYISKLDLLEDEQSLDVYVQA--YQSIGYEVI 58 Query: 189 MVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL-GLQKEILTNDISDNSGLGQ 247 T + L PL LTG+I++F GQ+GVGKS+LLN + LQ E T +IS++ G G+ Sbjct: 59 ----KTTEELLPL---LTGKITVFMGQTGVGKSTLLNKIAPDLQLE--TGEISESLGRGR 109 Query: 248 HTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD 307 HTT A Y+ +GG + D+PG E + Q F E ++ CK+R C H + Sbjct: 110 HTTRAVSFYNL-NGGKIADTPGFSSLDYEVSTAEDLNQAFPEIAEFSQSCKFRTCTHTHE 168 Query: 308 PGCAIREAVEEGKIAETRFENYHRILESMAQVKTRK 343 P CA++ AVE G+IA RF+NY L+ +++++ R+ Sbjct: 169 PACAVKPAVESGQIASFRFDNY---LQFLSEIENRR 201 >UniRef50_Q2S3I5 Ribosome small subunit-dependent GTPase A n=2 Tax=Rhodothermaceae RepID=Q2S3I5_SALRD Length = 324 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 156/311 (50%), Gaps = 25/311 (8%) Query: 41 EGIVISRFGMHADVESADGDV-------HRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNV 93 EG+V S G DV+ D + R + + GDRV R + Sbjct: 16 EGVVTSSTGSWYDVQVGDRTIPSRMRGKFRLTRQDVTNPIAVGDRVTLR-----VADEDQ 70 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKP-------IAANIDQIVIVSAIL-PELSLNIIDRYL 145 G + +HERT+ L+R P + AN+D+I V A+ P L+ +DR L Sbjct: 71 TGFITDIHERTNKLSR----RAAGPREGQEHVLVANVDRIWSVQAVRRPALNPRFLDRLL 126 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 V + +++NKIDL+ + + V + Y ++GY VL S+ + GL L +A Sbjct: 127 VGAAAQDVPAGLIINKIDLMTQDDLPDVMDLHLRYADLGYPVLATSATEELGLDRLRDAF 186 Query: 206 TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 G+++ G SG GKS+LLNAL E+ T +S + G HTTT A L+ V+ Sbjct: 187 DGQVNAITGPSGAGKSTLLNALEP-DLELRTGSVSSTTEKGTHTTTHAELHALSDDSYVV 245 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PGVREFG+ + P+ + F + Y+ C++ DC HD +P CA++ AVE G + R Sbjct: 246 DTPGVREFGVRDVHPKDLAHYFPDLSPYVNACQFPDCTHDHEPNCAVKAAVERGDVHAER 305 Query: 326 FENYHRILESM 336 E+Y ILES+ Sbjct: 306 HESYLAILESL 316 >UniRef50_C3J9M6 Ribosome small subunit-dependent GTPase A n=3 Tax=Bacteria RepID=C3J9M6_9PORP Length = 317 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 150/292 (51%), Gaps = 20/292 (6%) Query: 58 DGDVHRC------NIR----RTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVL 107 DGD C N+R R+ +V GDRV +P + E + + A+ R + + Sbjct: 18 DGDGGECDALVKGNLRLKGLRSTNPVVVGDRVELQPTR---EDLEHPYYITAICPRRNYI 74 Query: 108 TR--PDFYDGVKPIAANID-QIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDL 164 R + +AANID +++V+ I PE S +DR+L E I +++ NKIDL Sbjct: 75 IRKASNLSKESHILAANIDVALLVVTMIQPETSFTFVDRFLATAEAYDIPVVLLFNKIDL 134 Query: 165 LDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLL 224 +E + E IY +GY L +S+ GL+ + + GRI + +G SGVGKSSL+ Sbjct: 135 YGEEENRRLAEWQLIYAPLGYPTLSISATEGIGLEEVWPHIAGRIVLLSGHSGVGKSSLI 194 Query: 225 NALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH---GGDVIDSPGVREFGLWHLEPE 281 NALL + T+ IS G G HTTT + + GG +IDSPG++ FG + Sbjct: 195 NALLP-GSSLRTHSISLAHGTGMHTTTYSAMIPLAAERGGGYLIDSPGIKGFGTLEMNEH 253 Query: 282 QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 F EF C++ +C H +PGCA+ A+E G+IA +R+ +Y IL Sbjct: 254 NAHHYFREFFALSEGCRFNNCTHINEPGCAVLAALERGEIAPSRYVSYLGIL 305 >UniRef50_Q5HPX0 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Staphylococcus epidermidis RepID=RSGA_STAEQ Length = 291 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 158/294 (53%), Gaps = 22/294 (7%) Query: 52 ADVESADGDVH-RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVK-GIVEAVHERTSVLTR 109 DVE D R R+ S V GD V + E N K G + VH+R + L R Sbjct: 16 VDVEGERFDTKPRGLFRKKKFSPVVGDIVDF-------EVQNTKEGYIHHVHDRNNELKR 68 Query: 110 PDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDE 168 P P++ NID++VIV SA+ PE S ++DRYLV + ++P I++ K D+ ++ Sbjct: 69 P-------PVS-NIDELVIVMSAVEPEFSTQLLDRYLVIAHSYHLKPRILITKHDIASEQ 120 Query: 169 GMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL 228 + + + + +Y+ IGY + + + ++E G I + +GQSGVGKS+ LN+ Sbjct: 121 EILKIKDTIKLYQKIGYATQFIGKDS-NYTATVDEWSDGLI-VLSGQSGVGKSTFLNSYQ 178 Query: 229 GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFV 288 Q ++ TNDIS + G+HTT LY GG + D+PG H+E EQ+ F+ Sbjct: 179 P-QLKLETNDISKSLNRGKHTTRHVELYD-RKGGYIADTPGFSALDFNHIEKEQLKDFFI 236 Query: 289 EFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 + H+ CK+R+C H +P C ++ VE+G+I + R+++Y ++ ++ K R Sbjct: 237 DIHEAGEQCKFRNCNHIKEPQCHVKTLVEKGEIPQFRYDHYQQLYNEISNRKVR 290 >UniRef50_A6DJW3 Ribosome-associated GTPase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJW3_9BACT Length = 400 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 91/256 (35%), Positives = 150/256 (58%), Gaps = 16/256 (6%) Query: 95 GIVEAVHERTSVLTRPDFYDGVKP-----IAANIDQIVIVSAI-LPELSLNIIDRYLVAC 148 +VE + +R S+ +RPD ++P IA NID + +VS++ P + IDR L+ Sbjct: 152 ALVERIAKRKSIFSRPD---PLRPKIERVIAVNIDYVCMVSSLDSPVFNPFFIDRVLIGA 208 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E ++ LNK+DL + E V +++D YR +G + VS+H + G+ L+ L G+ Sbjct: 209 RQSGAEFVLCLNKMDL-EVEDKEQVLKELDYYRQLGVSIFEVSAHDEQGIDDLKLFLKGK 267 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNS-GLGQHTTTAARLYHFPHGGD--VI 265 S+F G SGVGKSSLLNA + +I T + + + G G+HTT + +H+ D +I Sbjct: 268 KSVFVGTSGVGKSSLLNA-ISPDLDIKTQETREKAGGRGRHTTVMS-TFHYLEDDDLYII 325 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG REF L + +++ F EF D L CK+ +C+H + GC + +A++ G I E R Sbjct: 326 DTPGFREFNLMEISKDELKFYFPEF-DGLESCKFSNCQHIHEVGCVVLDALDNGDIYERR 384 Query: 326 FENYHRILESMAQVKT 341 +++Y RIL+++ + +T Sbjct: 385 YDSYLRILDTLPKSET 400 >UniRef50_Q8TKG2 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Methanomicrobia RepID=RSGA_METAC Length = 369 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/247 (37%), Positives = 142/247 (57%), Gaps = 12/247 (4%) Query: 96 IVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 +V + R + L+R DG + IAAN+D I IV+++ +L+L ++RYL + Sbjct: 95 MVVNILPRRTCLSRGAAGDGGGEQLIAANLDTIFIVTSVGKDLNLRRLERYLAIVYSSGA 154 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIF 212 P+I+LNKIDL DD V + D+ ++ V+ +S+ ++ GL L L G Sbjct: 155 SPVILLNKIDLADDPAR-LVEKIRDVTGDV--PVIPLSALSKTGLDALGPYLNPGETVAL 211 Query: 213 AGQSGVGKSSLLNALLG--LQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGKS+L+NA LG +QK T DI + G+HTTT +++ P+G +ID+PG+ Sbjct: 212 VGSSGVGKSTLINAFLGETVQK---TADIRKDDEKGRHTTTVRQMFLLPNGAVLIDNPGI 268 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE L E + + F E D CK++DC H +PGCA+ +AV +G I E R E+YH Sbjct: 269 REIQLGD-SAEGLEKAFSEIVDAARNCKFKDCTHRNEPGCAVLQAVRDGIIPEERLESYH 327 Query: 331 RILESMA 337 R+ + ++ Sbjct: 328 RLTDELS 334 >UniRef50_Q8R9T7 Putative ribosome biogenesis GTPase rsgA n=16 Tax=Clostridia RepID=RSGA_THETN Length = 295 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 135/229 (58%), Gaps = 6/229 (2%) Query: 116 VKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 V+P AN+DQ +IV AI PE++ ++D+ +V E +IEP++ +NK+D+ E V Sbjct: 69 VRPPVANVDQAIIVFAISKPEINRVLLDKMIVVAEINKIEPVVCINKVDMEKREE---VE 125 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 +++YR IGY+ + S+ T +G++ L+ L +IS FAG SGVGKSSL+N L+ + Sbjct: 126 NLINVYRKIGYKAVGTSAVTGEGMEELKSYLKDKISFFAGPSGVGKSSLIN-LIQSNIRL 184 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T ++S+ G G+HTT + GG V+D+PG + + E++ F EF ++ Sbjct: 185 KTGELSEKLGRGRHTTRSVEFLPLDFGGYVLDTPGFTALEI-DIPKEELRNYFREFIEFQ 243 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRK 343 C++ C H +P CA+ EAV+EG I R+ +Y +L + + + R+ Sbjct: 244 ENCRFNSCLHVNEPDCAVTEAVDEGIIDRQRYISYLTLLREVKEKEKRR 292 >UniRef50_C4V0Q2 Ribosome-associated GTP-binding protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0Q2_9FIRM Length = 288 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/251 (36%), Positives = 137/251 (54%), Gaps = 17/251 (6%) Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVI-VSAILPELSLNIIDRYLVACET 150 + +G++E RTS+L RP AN+ QIV+ V+A P ++ R+LV E Sbjct: 52 STEGVIEGTEPRTSLLLRPRV--------ANLTQIVVTVAAAAPNPHPLVVSRFLVLAEH 103 Query: 151 LQIEPIIV-LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 I+ I++ +NKIDL F Y GY VL+VS+ GL L+E L G I Sbjct: 104 SGIDHIVLCINKIDLAGGNMTEFCTP----YEAAGYPVLLVSAVNGTGLSALQERLAGEI 159 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 ++FAG SG GKSSLLNA + + +S+ G G+HTT A L F GG V+D+PG Sbjct: 160 TVFAGPSGAGKSSLLNA-MDSSLALAVGAVSEKIGRGRHTTRRAELLPFA-GGYVVDTPG 217 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 + L + +++ F EF + G C++ C H +P CA++ A EEG++A TR++ Y Sbjct: 218 FTQQELTGIAADELADCFPEFLHFPG-CRFTPCSHSHEPNCAVKAAAEEGRLACTRYDAY 276 Query: 330 HRILESMAQVK 340 +L+ + V+ Sbjct: 277 IALLDEIRSVR 287 >UniRef50_Q1K3F8 GTPase EngC n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3F8_DESAC Length = 317 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 109/324 (33%), Positives = 174/324 (53%), Gaps = 31/324 (9%) Query: 26 KEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGK 85 ++KP +++ G+P G++IS +G+ V +G+ H ++R +V GDRV+ Sbjct: 11 QQKPQHNN---GKP--GLIISHYGVAVLVRFDNGEEHPVKVKRNSDHVV-GDRVMV---- 60 Query: 86 PAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYL 145 V V ++ ER + L R D + V+ +AAN+D + IV A+ P+ I+R + Sbjct: 61 -------VDERVTSL-ERRNALRRRDPFGKVRTLAANLDLLGIVVAVRPQTPSGFIERVV 112 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL--EE 203 VA I P++++NK DL G +Q+ R L VS+ DGL+ L E Sbjct: 113 VAARAADIAPLLIVNKQDL---PGTTAFEDQLQRDFPAMPR-LAVSAKQGDGLELLRHEL 168 Query: 204 ALTGRISIFAGQSGVGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGG 262 A GR S G SG GKSSLLNAL G+ E T D+++ G HTT+ + L P+GG Sbjct: 169 AEAGR-SALVGVSGSGKSSLLNALCPGIDLE--TGDLNEEDH-GCHTTSVSTLLALPNGG 224 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYL--GLCKYRDCKHDTDPGCAIREAVEEGK 320 +++D+PG R+F + E + F L C++R+C+H +PGC I++AV +G Sbjct: 225 ELVDTPGFRDFSPVDVSSEALAHWFPGVMSILEEQPCRFRNCRHRQEPGCRIKQAVTQGT 284 Query: 321 IAETRFENYHRILESMAQVKTRKN 344 +E R++ Y LE + Q++T +N Sbjct: 285 FSEQRYQLYLNTLEELEQLETARN 308 >UniRef50_A9KMS1 Ribosome small subunit-dependent GTPase A n=4 Tax=Clostridium RepID=A9KMS1_CLOPH Length = 359 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 145/248 (58%), Gaps = 19/248 (7%) Query: 96 IVEAVHERTSVLTR--PDF-----YDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVAC 148 I+ + R S TR P F +G++ IA+N D + ++ ++ + ++ ++RYL Sbjct: 83 IIYRILNRKSYFTRNNPGFGNYTGNEGLQSIASNFDYVFLMESLNQDFNVRRMERYLSTA 142 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI--GYRVLMVSSHTQDGLKPLEEALT 206 PII+L K DL DD V+E++ I + G +V+ +S+ T +GL L E LT Sbjct: 143 YDSGATPIIILTKADLCDD-----VSEKIAIMEQVSFGVKVVAISAITGEGLDQLVEYLT 197 Query: 207 -GRISIFAGQSGVGKSSLLNALLGLQKEIL-TNDISDNSGLGQHTTTAARLYHFPHGGDV 264 G +F G SG+GKSSL+NAL G KE++ ++I ++ G+HTTT L +G + Sbjct: 198 EGTTFVFLGSSGIGKSSLVNALAG--KEMMKVSNIREDDDKGRHTTTHRELISLENGVMI 255 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID+PG+RE GL ++E ++ F + CK++DCKH+ +PGCA+ +A+E+G ++ Sbjct: 256 IDTPGMRELGLSNVES-GLSSTFQDIDSLSEYCKFQDCKHEKEPGCAVNKAIEDGTLSLD 314 Query: 325 RFENYHRI 332 R +YH++ Sbjct: 315 RLRSYHKL 322 >UniRef50_B3EBY9 Ribosome small subunit-dependent GTPase A n=1 Tax=Geobacter lovleyi SZ RepID=B3EBY9_GEOLS Length = 333 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 95/283 (33%), Positives = 146/283 (51%), Gaps = 27/283 (9%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYD-------GVKPIAANID 124 V GD W +P +G +G++ A+ ER S R P + IAAN+D Sbjct: 65 VVGD---WVMVQPQPDG---RGMIHAILERKSSFARNLPGRRKIKGRERAEQQVIAANVD 118 Query: 125 QIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 +++VS + + +L I+RYL E ++VLNK DL ++ + I Sbjct: 119 LVLVVSGLDRDFNLRRIERYLTLVGGSGAEAVVVLNKADLCENPQRCLAQ-----VKEIA 173 Query: 185 YRVLMVSSHTQDGLKPLEEALT----GRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 + + S +D + LE L GR G SGVGKS++LN LLG Q++ + ++S Sbjct: 174 PKSPVYSCEARDP-RQLEFLLPHLQPGRTLALLGSSGVGKSTILNGLLGEQRQKI-GEVS 231 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 G G+HTTT L+ P GG +ID+PG+RE LW E E + + F + + G CK+ Sbjct: 232 QADGKGRHTTTHRELFQLPQGGILIDNPGMRELHLWGDE-EDLVESFSDIEELSGKCKFS 290 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRK 343 DC+H +PGCA+ AVE G+I R NYH++ + ++ R+ Sbjct: 291 DCRHQVEPGCAVLRAVEIGEITHERLGNYHKLKAELTSLQRRR 333 >UniRef50_Q82LC4 Putative ribosome biogenesis GTPase rsgA n=23 Tax=Actinomycetales RepID=RSGA_STRAW Length = 370 Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 4/216 (1%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEG-MAFVNEQM 177 +AAN+D V+ ++ EL L ++R+L +P++VL K DL+ D ++++ + + Sbjct: 117 LAANVDYAVVAVSLAVELDLGRVERFLALAWESGAQPVVVLTKADLVPDATTLSYLVQDV 176 Query: 178 DIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 + G VL VSS+ +GL L L+G S+ GQSG GKS+L NALLG + + + Sbjct: 177 ETAAP-GVPVLSVSSNLGEGLDVLAAVLSGGTSVLLGQSGAGKSTLANALLG-EDVMKVH 234 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 D G G+HTTT L P GG +ID+PG+R GLW E + Q F E C Sbjct: 235 ATRDVDGKGRHTTTTRNLLALPGGGVLIDTPGLRGVGLWDAE-TGVNQVFSEIEALAAEC 293 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 ++ DC H +PGCA+ A++ G++ E R ++Y ++L Sbjct: 294 RFHDCAHTAEPGCAVLAALDTGELPERRLDSYRKLL 329 >UniRef50_C9KJ38 Ribosome small subunit-dependent GTPase A n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ38_9FIRM Length = 298 Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 105/315 (33%), Positives = 160/315 (50%), Gaps = 33/315 (10%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIR------RTIRSLVTGDRVVWRPGKPAAEGV-NV 93 EG VI + V + G V C +R R +V GDRV A E + + Sbjct: 3 EGRVIKAYNSFFYVMTEAGLVS-CKLRGKFKKRRQSTGVVPGDRV-------AIELLPDG 54 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQ 152 G++E R ++L RP AN+ Q+++ +A P+L +++R+LV E Sbjct: 55 TGVIEQQLPRVNLLRRPA--------VANLTQVILTFAAAAPDLHPLLLNRFLVLAEWSG 106 Query: 153 IEPIIV-LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISI 211 I I++ +NK+DL + F+ + Y IGY V+ VS+ T G+ L L G +S+ Sbjct: 107 IPKIVICVNKMDLHEGPWQDFLRD----YETIGYPVVRVSAQTGQGIDVLRSRLRGEVSV 162 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 FAG SGVGKSSLLN + + T +S+ G+HTT A L + GG ++D+PG Sbjct: 163 FAGPSGVGKSSLLNQV-NPALTLATGHVSEKIKRGRHTTRVAELLPY-EGGYIVDTPGFS 220 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 + L+ + F EF Y G C++ C H +PGCA++ AVEE I R++ Y + Sbjct: 221 AMEMAELQVTDLPHYFPEFRPYEGACRFSPCSHTHEPGCAVKAAVEERSITRERYDAYEQ 280 Query: 332 ILESM--AQVKTRKN 344 IL+ + AQ+ RK Sbjct: 281 ILQEVKEAQMLARKK 295 >UniRef50_B3QWC8 Ribosome small subunit-dependent GTPase A n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QWC8_CHLT3 Length = 383 Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 83/244 (34%), Positives = 140/244 (57%), Gaps = 6/244 (2%) Query: 92 NVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACE 149 N I+ + R S+L R D + + IAANID +I+ A+ +LN ++RYLV Sbjct: 108 NSHAIIHHILPRKSLLKRKDPGKAIDFQLIAANIDYALIMQAVDSNFNLNRLERYLVMIH 167 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGR 208 I+PII+L+K DL+ + +A + E + ++ N Y +L +S+ T+DG++ L++ L + + Sbjct: 168 ESHIQPIIILSKTDLISENELAIMMENI-LHFNKKYLLLSISNITEDGIRSLQKELQSDK 226 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 G SGVGK++L N LLG + N++ + G+HTTT +L G ID+P Sbjct: 227 TYCLLGSSGVGKTTLFNKLLG-EARFGVNEVREKDSKGRHTTTRRQLLRLESGSIFIDTP 285 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G+RE G + ++ + + F E C+++DC H + GCA+++AV G I E R++N Sbjct: 286 GMREIGTFAIDS-GLDETFDEIVSLSRECRFQDCSHTHEDGCAVKDAVLNGTIDEARYQN 344 Query: 329 YHRI 332 + +I Sbjct: 345 FLKI 348 >UniRef50_Q0AXM1 GTPase EngC n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXM1_SYNWW Length = 294 Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 158/299 (52%), Gaps = 22/299 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSLV-TGDRVVWRPGKPAAEGVNVKGIVEA 99 EG+V+ R+ V+ ++ C +R I++ V TGDRV + P + KGI+E+ Sbjct: 7 EGLVLKRYSGFYYVQDEQYQIYECKLRGKIKAPVFTGDRVKFTPLEAG------KGILES 60 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIV 158 + R + L RP AN++ ++I+ A P SL ++D+ L+ +I P I+ Sbjct: 61 IIPRKNELYRPRI--------ANVNLLLIIMACKQPSPSLILLDKLLLLASYYRITPQIL 112 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 LNK DL D F+ D Y +G + S+ + G+ L + +I++FAG SG Sbjct: 113 LNKSDLPPDSKSIFIE---DYYPQMGLPPIKTSAIKKTGIDTLRIVIENKITVFAGPSGA 169 Query: 219 GKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 GKSSLLNAL+ G+ + T ++S G+HTT LY GG + D+PG + + Sbjct: 170 GKSSLLNALVDGIS--VKTQELSKKVERGKHTTRHVELYPLESGGWIADTPGFSQLEIPA 227 Query: 278 LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 ++ ++ F + CK+ DC H + CA+++AV EG IA++R++NY ILE + Sbjct: 228 IKSSELASYFNDLSSVAEECKFNDCLHQGEKECAVKDAVNEGLIAKSRYQNYISILEEI 286 >UniRef50_B1KX53 Putative ribosome biogenesis GTPase rsgA n=32 Tax=Clostridium RepID=RSGA_CLOBM Length = 292 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 146/253 (57%), Gaps = 14/253 (5%) Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACET 150 N KG +E ++ER S L RP AN+ Q +V+ S P++++++++++L+ CE Sbjct: 52 NNKGAIEKIYERRSELFRP--------AVANVTQALVVFSFKNPDINIDLLNKFLLLCEY 103 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 ++ I+ NK+DL++ E + + + GY ++ +++ + + +++ + ++ Sbjct: 104 NNLKAIVCFNKMDLVNKEDYK---DIISMIEQAGYDIIFLNAKEERNMDIIKKLIKDNVT 160 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 +F G SGVGKS++LN ++G ++ ++T +IS+ G+HTT + L + G ++D+PG Sbjct: 161 VFCGPSGVGKSTMLNKIIG-KETMITGNISEKLKRGKHTTRHSELIYVDEGL-LVDTPGF 218 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 + +E E + EF D++G CK+ C H +P CA+++AVEEG I + R++ Y Sbjct: 219 SSLDINFMEKEDLLHCIPEFRDFIGECKFTGCLHHREPNCAVKKAVEEGHIHKNRYDFYI 278 Query: 331 RILESMAQVKTRK 343 + LE + +K Sbjct: 279 KTLEEFMNRRKKK 291 >UniRef50_A8SM04 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SM04_9FIRM Length = 302 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 20/242 (8%) Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACET 150 N IVE + +L +P N+DQ +IV ++ PE+S IIDRY++ E Sbjct: 64 NTACIVEVFDRKNKIL---------RPPVVNVDQAIIVFSLKDPEISYKIIDRYIMYYEV 114 Query: 151 LQIEPIIVLNKIDLLDDEG-MAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 ++I I+ LNK DL+D E + F N IY +GY+++ +S + D K E+ +I Sbjct: 115 MKIPIILCLNKCDLIDKETEINFRN----IYDKLGYKIIF-NSISLDNRKLFEDICKDKI 169 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 S+ G SGVGKS++LN L I DIS+ + G+HTT AA LY F +ID+ G Sbjct: 170 SVITGASGVGKSTILN-FLNPDYNIWVGDISNKTKRGKHTTRAATLYEFFDNSFIIDTAG 228 Query: 270 VREFGLWHL--EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 L QI FVEF ++ CK+ DCKH +P C ++ +E G I+++R++ Sbjct: 229 FTSLDLTKFIDSEVQIRDAFVEF-EFGSKCKFSDCKHINEPDCYVKSKLESGSISKSRYD 287 Query: 328 NY 329 +Y Sbjct: 288 SY 289 >UniRef50_D2RNU7 Ribosome small subunit-dependent GTPase A n=2 Tax=Acidaminococcus RepID=D2RNU7_ACIFE Length = 295 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 150/309 (48%), Gaps = 31/309 (10%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIV 97 G +I + + V DG ++ C ++ ++ + GDRV E +G++ Sbjct: 6 GRIIKTYNGYYYVAGDDGVLYTCKVKGRMKQKRFIMAAGDRVEL-------EAQGAEGMI 58 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPI 156 V R ++L RP + AN+D ++ V A P+ S ++D+ L E I Sbjct: 59 RQVLPRQNLLQRP--------LVANLDCLMAVFACGDPDPSFLLVDKLLALAEAAGIPAA 110 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 +VLNK DL ++ IY +GY VL V + GL+P+ E + G F G S Sbjct: 111 LVLNKRDLAP---AGLIDRFRSIYEPLGYPVLPVEAREGLGLEPILERVKGHTVAFGGPS 167 Query: 217 GVGKSSLLNAL---LGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G GKS+LLN L L L+ T +S G G+HTT A L F GG ++D+PG Sbjct: 168 GAGKSTLLNHLDPSLTLK----TGHVSSKIGRGRHTTRFAELLPF-AGGYIVDTPGFGNI 222 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 L L+ +Q GF E GLC++ C H +P C ++ AVE G+IA +R+ +Y I Sbjct: 223 DLSELQMDQAADGFREIRKQEGLCRFTGCTHTHEPDCEVKAAVERGEIAPSRYASYCTIR 282 Query: 334 ESMAQVKTR 342 + +A K R Sbjct: 283 QELADPKKR 291 >UniRef50_C5CSN3 Putative ribosome biogenesis GTPase rsgA n=29 Tax=Burkholderiales RepID=RSGA_VARPS Length = 318 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 158/308 (51%), Gaps = 19/308 (6%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAV 100 +G+VI+ G H VE+ G+ C+ R V GDRV W+ A+E +G +E V Sbjct: 21 DGLVIASHGRHCLVETPTGERLICHPRGKKSQAVVGDRVRWQ----ASED---EGTIEEV 73 Query: 101 HERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN 160 R ++ R D K AAN+D ++I+ A PE S + + R L+A E +I PII LN Sbjct: 74 VPRRNLFYRQDEIR-TKSFAANLDHVLILIAAEPEFSEHQLARALIAAEAERITPIIALN 132 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS--SHTQDGLKPLEEALTGRISIFAGQSGV 218 K DL + A+ ++ YR + + VL +S + + L + L G+ ++ G SG Sbjct: 133 KSDLAEPFERAW--NKLAPYRRMHHGVLPLSLKASGEADYASLMKLLAGKSTLVLGPSGA 190 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG--GDVIDSPGVREFGLW 276 GKS+L+N LL LT +IS G+HTTT+ Y +IDSPG +EFGL Sbjct: 191 GKSTLIN-LLVPGATALTGEISQALNSGKHTTTSTTWYWVDEARTTSLIDSPGFQEFGLN 249 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE----GKIAETRFENYHRI 332 H+ P Q+ + ++ CK+ +C H +PGC + V+ G I+ TR+ Y + Sbjct: 250 HIAPMQLAGLMPDIAEHANDCKFYNCTHLHEPGCGVIANVDAPGKPGPISATRYRIYGEL 309 Query: 333 LESMAQVK 340 ++Q + Sbjct: 310 FAELSQSR 317 >UniRef50_B8CWT4 Ribosome small subunit-dependent GTPase A n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWT4_HALOH Length = 282 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/302 (30%), Positives = 155/302 (51%), Gaps = 28/302 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTI-RSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 +G+V G V ++ R IR + R + GD V VN ++E Sbjct: 2 KGLVTKAVGGFFFVADEQQNIIRTRIRGKVKRKVYPGDFV----------KVN-DAMIEK 50 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIV 158 ++ RT++L RP AN+DQ++++ +I P + ++D++L+ E + ++P+I+ Sbjct: 51 LYPRTNLLFRPA--------VANVDQVLVIHSIQNPPFARKMLDKFLIMVEAIGVKPVII 102 Query: 159 LNKIDLL--DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 +NKIDL D E + ++M Y+ GY+V ++S + GL L L ++S+ AG S Sbjct: 103 INKIDLKVPDIE----LEKEMKDYKEEGYQVYLISVKEKMGLNELYLTLEEKLSVLAGPS 158 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKSSL+ AL+ + + ++S G HTT L GG + D+PG L Sbjct: 159 GVGKSSLIKALVP-EARVKIGEVSQKLKRGVHTTRHVELLPINKGGWIADTPGFSALDLR 217 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + E + F Y G CK+R C H +PGC +++AV+EG I+E R+ +Y I + Sbjct: 218 GILSENLRFYFPGLARYEGQCKFRGCTHTHEPGCQVKKAVKEGMISEKRYNSYLNIYRDL 277 Query: 337 AQ 338 + Sbjct: 278 EE 279 >UniRef50_A1AQR2 Ribosome small subunit-dependent GTPase A n=4 Tax=Deltaproteobacteria RepID=A1AQR2_PELPD Length = 330 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 143/268 (53%), Gaps = 8/268 (2%) Query: 78 RVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELS 137 RV G + V+V G + R + L R D GV +AAN+D + IV A P Sbjct: 62 RVKRNSGHVVGDEVSVNGELLTRLPRATELRRRDARGGVHLVAANLDALGIVMA--PLSP 119 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 IDR +V T ++ P +V+NK DL E + Y + +S+ T +G Sbjct: 120 GRFIDRAIVTSRTARLTPFLVINKCDL--GEAHQLAARLRETY-AASLPLFPLSATTGEG 176 Query: 198 LKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 L PL E L TGR +F G +GVGKSSL+NAL K + + D +G+HTTT + L+ Sbjct: 177 LLPLREYLATGRCGVFIGSTGVGKSSLMNALCPHIK-LAVGSVGDYRSMGRHTTTVSTLH 235 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG-LCKYRDCKHDTDPGCAIREA 315 GG+++D+PG R+FGL + P+ + F F + C++ +C+H ++PGC++ + Sbjct: 236 SLDGGGELVDTPGFRDFGLVDISPQDLAAHFPGFEEAGSESCRFSNCRHRSEPGCSVLRS 295 Query: 316 VEEGKIAETRFENYHRILESMAQVKTRK 343 +++G+I R+ ++ +L+ + + +K Sbjct: 296 LQQGRITRERYASFLELLDEVEAEEEKK 323 >UniRef50_C8NZ87 Ribosome small subunit-dependent GTPase A n=4 Tax=Erysipelotrichaceae RepID=C8NZ87_ERYRH Length = 284 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 124/215 (57%), Gaps = 8/215 (3%) Query: 116 VKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 ++P+ AN+DQ ++++SA P+ S +++R + I PII+++K DL D A Sbjct: 65 IRPLVANVDQALIVMSAKEPDFSFTLVNRLIFLVSLQNINPIIIVSKGDLADS---ALKQ 121 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 +D Y GY V+M S LE + +IS+ AGQSGVGKSS+LN + E+ Sbjct: 122 SILDEYEQYGYTVIM--SGKDISTDALESVMENKISVLAGQSGVGKSSILNRISD-DLEL 178 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T +IS G G+HTT ++Y GG + D+PG ++P +++Q +F ++ Sbjct: 179 NTQEISKALGRGRHTTRHNQIYPL-CGGWIADTPGFSSLDFSSVDPVELSQSIPDFVPFI 237 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 G CKYRDC H +PGC I+E VE G+I++ R ++Y Sbjct: 238 GNCKYRDCMHIQEPGCIIKEKVESGEISKQRHQDY 272 >UniRef50_Q07I14 Ribosome small subunit-dependent GTPase A n=8 Tax=Proteobacteria RepID=Q07I14_RHOP5 Length = 373 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 135/250 (54%), Gaps = 15/250 (6%) Query: 95 GIVEAVHERTSVLTR----PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACET 150 +V AV ER + L R DF + IA+N+D VIV + + +L ++RYLV Sbjct: 102 AVVHAVLERRTSLRRKSANSDFQ--YQMIASNVDYAVIVQSCHFDFNLKRLERYLVMVNE 159 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR--VLMVSSHTQDGLKPLEEALT-G 207 IEP+I+L K DL+ E +A EQ R+ G V+ +S+ T G+ L + L Sbjct: 160 GGIEPLILLTKTDLVSPEVLA---EQTATIRSAGISAPVITLSNVTGAGIDALLQQLVPA 216 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 + F G SGVGKS+++N L+G K L N+G G+HTT L G VID+ Sbjct: 217 KTYCFVGSSGVGKSTVINRLVGRAK--LDTGTVSNTGEGRHTTVRRELILLDGGALVIDN 274 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+REFG+ E I F + C++ DC H +PGCA+REA++ G+I++ FE Sbjct: 275 PGMREFGIADAEA-GIETSFADLSALATGCRFNDCSHSAEPGCAVREALKTGQISQAHFE 333 Query: 328 NYHRILESMA 337 NY ++ + A Sbjct: 334 NYQKLRKEAA 343 >UniRef50_Q39XI8 GTPase EngC n=2 Tax=Geobacter RepID=Q39XI8_GEOMG Length = 358 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 123/218 (56%), Gaps = 6/218 (2%) Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNE 175 V+PIAAN+D + IV + + ++RYLVA EP+++L+K DL D A Sbjct: 106 VQPIAANVDLVFIVMGLDGNYNPRRLERYLVAARESGAEPVVILSKADLCPD---AAERV 162 Query: 176 QMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEI 234 G RV+ VSS +G+ + E L +G + F G SGVGKS+L+N L G ++ + Sbjct: 163 AEAAALGPGVRVVPVSSLAGEGVSAVREVLASGVTACFVGSSGVGKSTLVNRLAG-EEVM 221 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T + + G+HTTT ++ P G VID+PG+REFGLW E + F E + Sbjct: 222 ATGAVRERDAKGRHTTTHRQMILLPCGAIVIDTPGMREFGLWQAG-EGLDASFPEIAELA 280 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 C++ DC H +PGCA+R+A+ G+I + R+ +Y ++ Sbjct: 281 KQCRFHDCSHAHEPGCAVRDALAGGEIDQGRYASYLKL 318 >UniRef50_Q6GHL4 Putative ribosome biogenesis GTPase rsgA n=58 Tax=Staphylococcus RepID=RSGA_STAAR Length = 291 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 25/281 (8%) Query: 66 IRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQ 125 R+ S V GD V + + +N +G + V+ER + L RP P++ NID Sbjct: 31 FRKKKFSPVVGDIVEF-----DVQNIN-EGYIHQVYERKNELKRP-------PVS-NIDT 76 Query: 126 IVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 +VIV SA+ P S ++DR+LV + Q+ I++ K D E +NE + IY NIG Sbjct: 77 LVIVMSAVEPNFSTQLLDRFLVIAHSYQLNARILVTKKDKTPIEKQFEINELLKIYENIG 136 Query: 185 YRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL---LGLQKEILTNDISD 241 Y + + D K + EA + + + +GQSGVGKS+ LN L L+ TNDIS Sbjct: 137 YETEFIGN--DDDRKKIVEAWSAGLIVLSGQSGVGKSTFLNHYRPELNLE----TNDISK 190 Query: 242 NSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRD 301 + G+HTT L+ G + D+PG H++ ++I F+E + Y CK+R+ Sbjct: 191 SLNRGKHTTRHVELFE-RQNGYIADTPGFSALDFDHIDKDEIKDYFLELNRYGETCKFRN 249 Query: 302 CKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 C H +P C ++ +E G IA+ R+++Y ++ ++ K R Sbjct: 250 CNHIKEPNCNVKHQLEIGNIAQFRYDHYLQLFNEISNRKVR 290 >UniRef50_Q038H7 Predicted GTPase n=8 Tax=Lactobacillus RepID=Q038H7_LACC3 Length = 301 Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/303 (32%), Positives = 157/303 (51%), Gaps = 24/303 (7%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIV 97 G +I + + D+ + +G +R R ++R + + GD ++PG+ EG +K Sbjct: 7 GRIIKQISGYYDI-AVNGTTYRTRGRGSLRNDKITPLVGDIAAFQPGEGDDEGYLLK--- 62 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIEPI 156 V R + L RP P+A N+DQ ++I SA+ P+ S N++DR+LV E I Sbjct: 63 --VLPRHNALVRP-------PVA-NVDQAVLITSAVEPDFSKNLLDRFLVYLEGHDIHAE 112 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG-LKPLEEALTGRISIFAGQ 215 I L K DL + + + + + Y IGY V L ++ + +++IF GQ Sbjct: 113 IYLTKTDLTKPQRLTKIRQDLAGYTKIGYPVFAPDKPFDPTILAQVQASFADKLTIFTGQ 172 Query: 216 SGVGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 +G GKS+LLN L+ GL ++ T IS G+HTT LY HGG V D+PG G Sbjct: 173 TGAGKSTLLNHLVPGL--DLATAAISHALNRGRHTTRTTDLYPI-HGGLVADTPGFSSLG 229 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L + + + F EF CK+R C+H ++P CA++ A+ G I ++R++NY + E Sbjct: 230 LLDVTLDDLRDRFPEFAALAPNCKFRGCQHVSEPHCAVKAALAAGDIMQSRYDNYLQFRE 289 Query: 335 SMA 337 ++ Sbjct: 290 ELS 292 >UniRef50_C2HH17 GTP-binding protein n=2 Tax=Finegoldia magna RepID=C2HH17_PEPMA Length = 292 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 89/281 (31%), Positives = 145/281 (51%), Gaps = 27/281 (9%) Query: 65 NIRRTIRSLVTGDRVVWRPGKPAAEGVNVK---GIVEAVHERTSVLTRPDFYDGVKPIAA 121 N R + V GD+V +NV+ G + +H R+ +L RP+ + Sbjct: 32 NFRNKKITPVVGDKV----------DINVENGLGFILKIHPRSVLLHRPE--------VS 73 Query: 122 NIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 NID+ ++S+I P ++L ++D+YL+ E I+ +IV NK DL+ ++ F DIY Sbjct: 74 NIDKCFVLSSIKSPNINLMLLDKYLLMIEKNNIDCVIVFNKSDLVSEDEKKFY---ADIY 130 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 RNIGY+V+ S+ + + L IS G SG GKSS L L ++ ++ IS Sbjct: 131 RNIGYKVIFNSNESSITNEELLNEFKNHISCVIGPSGAGKSSTLKKLFP-NEDFVSGKIS 189 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPE-QITQGFVEFHDYLGLCKY 299 D + G+ TT + V+D+PG F L L+ + +I FVEF CK+ Sbjct: 190 DKTQRGKQTTRHIEIKMVDDNTYVLDTPGFSSFDLSFLDDKSEIKNNFVEFRKNSSKCKF 249 Query: 300 RDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 +C H +P C I+ VE G+I+++R++NY I+E +++ Sbjct: 250 NNCDHINEPKCEIKRLVETGEISQSRYDNYLNIVEEYEKIR 290 >UniRef50_A3I6Q8 Ribosome-associated GTPase n=1 Tax=Bacillus sp. B14905 RepID=A3I6Q8_9BACI Length = 356 Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 81/256 (31%), Positives = 144/256 (56%), Gaps = 12/256 (4%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 + I+ + +R SV +R ++ +A+N+D +++V ++ + ++ ++RYLVA Sbjct: 85 RAIIHQLFQRKSVFSRKVAGLEIQEQIVASNVDIVLLVMSLNADFNIRRLERYLVAAWDS 144 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRIS 210 +PIIVL K DL DD + V E + G V + S+ + +GL ++ T G Sbjct: 145 GAKPIIVLTKADLCDD-ASSLVKEVDSV--AFGVDVFVTSAISGEGLTEIQALFTEGVTG 201 Query: 211 IFAGQSGVGKSSLLNALLGLQKEIL--TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 G SG GKS+L NAL G E+L +DI ++ G+HTTT L P GG +ID+P Sbjct: 202 ALLGSSGAGKSTLTNALCG---EMLMKVSDIREDDAKGRHTTTHRELVMLPSGGCLIDTP 258 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G+RE LW+ + + ++ F + + C+YRDC H +P CA+++A+ +G++ + R ++ Sbjct: 259 GMRELQLWN-QGDSLSSSFQDVEELAKACRYRDCTHQKEPYCAVQQAIADGELDQNRLQS 317 Query: 329 YHRILESMAQVKTRKN 344 Y ++ +A ++ + N Sbjct: 318 YFKLQRELAYMERKTN 333 >UniRef50_B4RG68 Ribosome-associated GTPase n=2 Tax=Caulobacteraceae RepID=B4RG68_PHEZH Length = 360 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 21/311 (6%) Query: 43 IVISRFGMHADVESADGDVHRC----NIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 IV R G E+ + D R + V GD V + P K V+ Sbjct: 29 IVQQRGGYRLITEAGETDAKAAGRLMKSREEMARPVAGDWVAYEPRK-----APEPAFVQ 83 Query: 99 AVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPI 156 V R + R GV + +AAN+D +V+++ +L+L ++RYL P+ Sbjct: 84 HVLPRRTAFVRKAAGRGVHAQVVAANVDVAFLVTSLNSDLNLRRLERYLATAHESGARPV 143 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYR--VLMVSSHTQDGLKPLEEAL-TGRISIFA 213 IVL K DL D E++ R I VL V++ +GL+ + L GR ++ Sbjct: 144 IVLTKADLAPD-----AAERVAEVRTIAGEAPVLAVAAKQGEGLEAVAAHLEPGRTAVLL 198 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SG GKS+LLNAL G ++ + T +I ++ G+HTTT L P GG ++D+PG+RE Sbjct: 199 GMSGAGKSTLLNALAGSER-MATGEIREDDERGRHTTTHRELVLLPSGGLILDTPGMREL 257 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 GLW + ++ F + +G C++ DC H +PGCA+R A+ +G + R+ ++ ++ Sbjct: 258 GLWDADA-GVSAVFEDIEALVGECRFSDCGHGGEPGCAVRAALADGSLDPDRWASFRKLQ 316 Query: 334 ESMAQVKTRKN 344 A + R++ Sbjct: 317 AEAAYEQRRED 327 >UniRef50_B8FYJ7 Ribosome small subunit-dependent GTPase A n=17 Tax=Bacteria RepID=B8FYJ7_DESHD Length = 365 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 144/257 (56%), Gaps = 12/257 (4%) Query: 96 IVEAVHERTSVLTRPDF--YDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 I++++ R S +R + +A NID + +V+A+ + ++ I+RYL Sbjct: 93 IIQSILPRKSKFSRKAAGKTSAEQIVATNIDTVFLVNALNFDFNVRRIERYLTLAWESGA 152 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNI--GYRVLMVSSHTQDGLKPLEEAL-TGRIS 210 P++VL+K DL DD V E++ ++ G +L +S T DG+ + + G+ Sbjct: 153 NPVLVLSKTDLCDD-----VQEKVSQVQDAAPGVDILPISCATGDGVSAIAPYIRQGQTI 207 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SG GKS+L+N LLG Q LT ++ + G+HTTT+ L+ P GG +ID+PG+ Sbjct: 208 ALLGSSGAGKSTLVNYLLG-QNVQLTYEVREKDSRGRHTTTSRELFLLPQGGVLIDTPGM 266 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE L+ E +++ F + Y G C++ DC+H+++PGCA+++A+ EG ++E R+E++ Sbjct: 267 REIQLFG-SGEGLSEAFEDIAAYAGNCRFSDCQHESEPGCAVQKAIAEGMLSEERYESFK 325 Query: 331 RILESMAQVKTRKNFSD 347 ++ + + N + Sbjct: 326 KLQREARYISRKTNLHE 342 >UniRef50_B0K1Y6 Ribosome small subunit-dependent GTPase A n=14 Tax=Clostridia RepID=B0K1Y6_THEPX Length = 293 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 130/215 (60%), Gaps = 6/215 (2%) Query: 116 VKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 ++P AN+DQ +IV AI PE++ ++D+ +V E+ IEPII +NK+DL +D AF Sbjct: 69 IRPPIANVDQAIIVFAIAKPEINRVLLDKMIVLAESNDIEPIICINKVDLKEDRE-AF-- 125 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 + + IY+ IGY+ + S T+DG+K L+ L ++S FAG SGVGKSSL+N++ ++ Sbjct: 126 DLVTIYQKIGYKAVTTSVVTKDGIKELKSYLKDKVSFFAGPSGVGKSSLINSIQS-NIKL 184 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T ++S+ G+HTT + L GG V+D+PG L ++ + + F EF + Sbjct: 185 KTGEVSEKLLRGRHTTRSVELLSLDFGGYVLDTPGFTALTL-DIDNQDLRYYFREFLELQ 243 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 CK+ C H +P C I +AV+EG I + R+ +Y Sbjct: 244 RGCKFSSCLHVNEPDCNIIKAVKEGLIDKNRYLSY 278 >UniRef50_C4FT82 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT82_9FIRM Length = 330 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 163/315 (51%), Gaps = 21/315 (6%) Query: 41 EGIVISRFGMHADVESADGDVH----RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGI 96 EGI+ V S +G + R N R + GD V + EG++ K Sbjct: 23 EGIISQSLSGFYSVRS-EGQTYVTKPRGNFRHQQLKPLVGDHVTFE----WEEGLDPKAD 77 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANID-QIVIVSAILPELSLNIIDRYLVACETLQIEP 155 +A+ VL R + + V+P N+D +V++S + P+ S +++D++L + + IEP Sbjct: 78 -QALGRLIEVLPRRNQF--VRPSVVNVDDALVVMSLVEPDFSYSLVDQFLASVTSHGIEP 134 Query: 156 IIVLNKIDLL-----DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 +VL K DLL + + V + +Y GY V ++ + D L L + L + Sbjct: 135 HLVLTKYDLLLAQEGEKQAQDRVAQIQALYEAAGYTVTVMDPAS-DALANLSQLLHQGLY 193 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 + GQSGVGKS+LLN LL Q +I T +IS G G+HTT LY + + D+PG Sbjct: 194 VVMGQSGVGKSTLLNQLLP-QADIETGEISHYLGRGRHTTREVNLYPL-NQALIADTPGF 251 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 +E EQ+TQ F E + C++R C H +PGCA+++A+E G +A +R+++Y Sbjct: 252 SALDFEQIEKEQVTQLFPEIQELSQECRFRSCLHLEEPGCAVKQALEAGSLAASRYQSYC 311 Query: 331 RILESMAQVKTRKNF 345 ++++ + Q K + + Sbjct: 312 QLVQKIDQRKPQYHL 326 >UniRef50_B1ZUH7 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Opitutus terrae PB90-1 RepID=RSGA_OPITP Length = 367 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 131/256 (51%), Gaps = 7/256 (2%) Query: 90 GVNVKGIVEAVHERTSVLTRPDF--YDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 GV + G + AV R + TR D + +A N+D + +V+ + + +L I+RYL Sbjct: 85 GVALVGDIHAVLPRRTAFTRRAVGDADAEQVLATNVDTVFLVTGLDRDFNLRRIERYLAV 144 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT- 206 + +P++VLNK DL D A E I R V+ +S+ DG+ L L Sbjct: 145 ARASEAQPVVVLNKSDLHPDARGAEA-EVRRITRTAP--VVTLSAARGDGIAALAPWLVP 201 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 G G SG GKS+L+N LLG Q++ T +S G+HTTT L P G VID Sbjct: 202 GATVALLGSSGAGKSTLINRLLGKQRQD-TGPLSHAMNKGRHTTTHRELLALPGGALVID 260 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG+RE LW ++ + + F E C++ DC H +PGCA+R A+++G + TR+ Sbjct: 261 TPGLRELQLWGVDESAVAETFPEVAALAAECRFPDCTHQREPGCAVRAALDDGTLDPTRW 320 Query: 327 ENYHRILESMAQVKTR 342 +Y ++ A R Sbjct: 321 ASYEKLQREQAYAARR 336 >UniRef50_Q2SSL6 Ribosome small subunit-dependent GTPase A n=4 Tax=Mollicutes RepID=Q2SSL6_MYCCT Length = 300 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 147/259 (56%), Gaps = 21/259 (8%) Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQI 153 G ++ + R + L RP AN+DQ++IV+A+ P S ++++Y++ ETL+I Sbjct: 52 GYIKEIKPRKNSLDRPKI--------ANVDQVLIVTALYEPLFSSFLLNKYIMMLETLKI 103 Query: 154 EPIIVLNKIDLLDDEGMAF-VNEQMDIYRNIGYRVLMVSSHTQDGLK-------PLEEAL 205 +PI++ K+DLL + V +++ Y + Y+VL++++ +D L+ L+E L Sbjct: 104 KPILIFTKVDLLKESSYYQEVMHKINWYEKMHYQVLIINN--KDNLENKNTIILKLKELL 161 Query: 206 TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 +IS+F GQ+G GKS+ LN L + K+I TN+IS G+HTTT+ +LY+ + + Sbjct: 162 KNKISVFTGQTGAGKSTTLNNFLDINKQIKTNEISKKLNRGKHTTTSIQLYNLENNIFIA 221 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG F L +++ E I + F +L CK+ DC H + C +++AV E + Sbjct: 222 DTPGFSAFDLNNIDIEHILYSWETFIPFLNKCKFVDCTHTHETKCVVKKAVAEHLLPTFI 281 Query: 326 FENYHRILESMAQVKTRKN 344 + +Y ++ E + Q RKN Sbjct: 282 YNDYVKVYEELKQ--NRKN 298 >UniRef50_B3PN77 GTPase YjeQ/EngC n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PN77_MYCA5 Length = 279 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 91/307 (29%), Positives = 155/307 (50%), Gaps = 37/307 (12%) Query: 40 DEGIVISRFGMHADVES-ADGDVHRCNIRRTIRSL----VTGDRVVWRPGKPAAEGVNVK 94 D+G ++ DV+S +D ++R +R L + GD V + Sbjct: 2 DKGKIVKSIAGFYDVKSFSDSKIYRVRGSGKLRLLDMKPIVGDFVEFEHN---------- 51 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQI 153 E +H ++ R +F+ ++P AN+DQ IV++S + P+ S ++D++L+ E + Sbjct: 52 ---ELIHR---IMGRKNFF--IRPKIANVDQAIVVMSLVEPDFSSQLVDKFLIIIENKNV 103 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 PIIVL K DL ++D Y++ GY V ++ T++G L E + S F Sbjct: 104 TPIIVLTKKDLTS-------KTKIDFYKDQGYTVYEINYETEEGFDDLREIFRNKTSFFV 156 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQ+GVGK++L+N L E T IS G+HTT L F +GG++ID+PG Sbjct: 157 GQTGVGKTTLINYLAKTSFE--TQAISKALNRGKHTTREVSLIDF-NGGEIIDTPGFSSI 213 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKH--DTDPGCAIREAVEEGKIAETRFENYHR 331 + L +++ F F + +CKYR C+H + + C +++ V +G I + R++NY Sbjct: 214 E-FDLTIDEMPVAFKTFREAAKMCKYRSCRHYQEAESECNVKQLVLKGIIKQERYDNYRS 272 Query: 332 ILESMAQ 338 LE + + Sbjct: 273 FLERLLK 279 >UniRef50_A6GTD7 Ribosome small subunit-dependent GTPase A n=1 Tax=Limnobacter sp. MED105 RepID=A6GTD7_9BURK Length = 330 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 85/305 (27%), Positives = 156/305 (51%), Gaps = 20/305 (6%) Query: 37 GEPD--EGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVK 94 G PD +V++ +G H G + + + R + GD ++ P +++ Sbjct: 26 GNPDLLNALVVASYGRHFLARDDSGTIWQVYGKGKRREVAVGDEIIILPSG------DMQ 79 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 VE + R +++ R D K AAN+D ++++ AI P S ++ R L AC+ ++ Sbjct: 80 AWVEDIQPRKNLVYRSDALKS-KMFAANLDGVLLMLAISPPYSPELLGRTLTACKHAEVP 138 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYR----NIGYRVLMVS---SHTQDGLKPLEEALTG 207 I+ NK+D+L+ + + +++ + + V+ S T+ L+PL L G Sbjct: 139 LTILFNKVDILEGDSETLEAVEQELFEITLGEVPTHYISVTERPSETETLLQPL---LEG 195 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 + ++ GQSG+GKS+L+N L+ TN+IS G+HTTT +++ G ++IDS Sbjct: 196 KRTLILGQSGMGKSTLINLLIP-GALAATNEISMALNAGKHTTTHTQMHFGAQGLELIDS 254 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG + FGL HL + F + D C++ +C+H +P CA++ +E+G ++ R+E Sbjct: 255 PGFQAFGLHHLSESDLLNAFTDIRDEGNKCRFANCQHKREPDCAVKNGLEDGTLSPARYE 314 Query: 328 NYHRI 332 Y + Sbjct: 315 LYQML 319 >UniRef50_Q2JW76 Ribosome small subunit-dependent GTPase A n=2 Tax=Synechococcus RepID=Q2JW76_SYNJA Length = 363 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/256 (35%), Positives = 136/256 (53%), Gaps = 18/256 (7%) Query: 63 RCNIRRTIRSLVTGDRV-VWRPGKPAAEGV-NVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 R +++ +S++ GD V V P PAA+ + +G +EA+ R + L RP Sbjct: 62 RAKLKKMGQSVMVGDWVEVSLP--PAADSLWPERGAIEAILPRRTQLPRPAI-------- 111 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 ANI Q+++V A+ PE N + R LV E + +V NK D ++ A Sbjct: 112 ANITQVLVVMALAEPEPEPNALSRLLVQAEASHLRVQVVFNKCDCVE---AAVAESWRQR 168 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDI 239 + GY L+VS+ T+ G+ L +IS+ AG SGVGKSSLLN LL ++ T + Sbjct: 169 LQRWGYEPLLVSALTEAGIPELRRRCRDQISVVAGPSGVGKSSLLNRLLP-AVQLTTQAV 227 Query: 240 SDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF-GLWHLEPEQITQGFVEFHDYLGLCK 298 S+ G+HTT L+ P GG + DSPG G+ + P+Q+ + F E + LG C+ Sbjct: 228 SEKLRQGRHTTRHVELFPLPEGGWIADSPGFNAGEGIPPVSPQQLIRCFPEVRERLGTCQ 287 Query: 299 YRDCKHDTDPGCAIRE 314 +RDC HD +PGC +RE Sbjct: 288 FRDCLHDREPGCGLRE 303 >UniRef50_B8CXT2 Ribosome small subunit-dependent GTPase A n=2 Tax=Bacteria RepID=B8CXT2_HALOH Length = 367 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 76/234 (32%), Positives = 128/234 (54%), Gaps = 22/234 (9%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD--------EGM 170 +A+NID I IV+++ + +L I+RYL P+++LNK DL D+ E + Sbjct: 127 VASNIDTIFIVTSLNQDFNLRRIERYLTIAWDSGANPVVILNKADLCDEIEVRKSEVESI 186 Query: 171 AFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLG 229 AF G + ++++ +G+ L+ G G SGVGKS+L+N+LLG Sbjct: 187 AF-----------GVPIYVIAALENEGVDQLKRYFKRGETVALLGSSGVGKSTLINSLLG 235 Query: 230 LQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVE 289 +K + N++ ++ G G+HTTT + GG +ID+PG+RE LW + E I F + Sbjct: 236 KEK-MKVNNVREDDGKGRHTTTRREMILLDEGGIIIDTPGMREIQLWDV-SEGIGNSFSD 293 Query: 290 FHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRK 343 C + DC+H+++P CA+++A+EEG I E RF +Y ++ ++ +K Sbjct: 294 IEKLAQDCYFNDCQHESEPKCAVKKAIEEGIITEERFNSYKKLQRERKYIEIKK 347 >UniRef50_A8LW34 Ribosome small subunit-dependent GTPase A n=3 Tax=Micromonosporaceae RepID=A8LW34_SALAI Length = 362 Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 126/251 (50%), Gaps = 8/251 (3%) Query: 97 VEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 VEAV R + L R + +AAN+ +V + PE L I+R L Sbjct: 87 VEAVLPRRTALIRRTAGKAASGQVLAANLTAAAVVEPVHPEPDLGRIERLLALAHESGAR 146 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLE-EALTGRISIFA 213 P++VL K DL+ D A + Q+ G VL VS+ DGL PL E R Sbjct: 147 PLVVLTKTDLVSDP--AALTRQVAAV-APGVPVLPVSAERGDGLDPLRPEVAPSRTLGLL 203 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SG GKSSL+NAL G + T I G G+HTTT L P GG V+D+PGVR Sbjct: 204 GPSGAGKSSLVNALAG-AVVMPTQAIRRVDGKGRHTTTWRALVAVPGGGAVVDTPGVRAV 262 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 GL + + F + C+YRDC HD +P CA+REAVE G+++ R+E++ R+ Sbjct: 263 GLLD-GAVGLDRAFADIATLATGCRYRDCAHDGEPACAVREAVESGELSGRRWESWRRLQ 321 Query: 334 ESMAQVKTRKN 344 +A R++ Sbjct: 322 REVAFETRRRD 332 >UniRef50_Q88WF3 Putative ribosome biogenesis GTPase rsgA 2 n=3 Tax=Lactobacillus plantarum RepID=RSGA2_LACPL Length = 352 Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 87/244 (35%), Positives = 129/244 (52%), Gaps = 11/244 (4%) Query: 97 VEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 +EA+ R SVL R + DG + IA NI+ I I ++ + ++ ++RYL Sbjct: 83 IEAIAPRQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGAL 141 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFA 213 P+IVL K DL D D+ ++G + S T GL L+ LT G+ F Sbjct: 142 PVIVLTKADLCTDLATKL-RAVADV--SVGVPTITCSVETGQGLDELQPYLTTGQTVAFV 198 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKS+L+N LLG Q + T I + G+HTTT+ +L P G VID+PG+RE Sbjct: 199 GSSGVGKSTLINRLLG-QDILATKSIRTDDNKGRHTTTSRQLIPLPTGACVIDTPGMREL 257 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 ++ + + Q F E CK+ DC H ++PGCA+R AVE G + R ++Y ++ Sbjct: 258 QIFMGD---LNQTFAEIAALATQCKFNDCTHTSEPGCAVRAAVEVGTVTSERLQSYQKLQ 314 Query: 334 ESMA 337 M+ Sbjct: 315 REMS 318 >UniRef50_Q73MQ9 GTPase YjeQ n=1 Tax=Treponema denticola RepID=Q73MQ9_TREDE Length = 315 Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 95/303 (31%), Positives = 153/303 (50%), Gaps = 25/303 (8%) Query: 54 VESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTS 105 VE DG C+I+ + L GD V P + + + G++E + S Sbjct: 15 VECEDGKFRSCSIKGKVLKDSALYYNPLAAGDFVNLEPDTHSDDEGLITGLIE---RKNS 71 Query: 106 VLTRPDFYDGVKPIAANIDQIV-IVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDL 164 L + + +AANID +V +VSA P +DR LV E +I +IV+NK DL Sbjct: 72 FLRLNQKLNMPQLLAANIDLLVCVVSAANPPFRPRFVDRVLVQAEIQKIPVLIVINKCDL 131 Query: 165 LDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLL 224 + +A V ++++ ++ + Y+ + VS+ G+ L E+L+ + S GQSGVGKS+LL Sbjct: 132 ---KILADVRDRIEDWKRLDYKTIEVSAKEGRGMDNLIESLSSKTSALVGQSGVGKSTLL 188 Query: 225 NALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP--------HGGDVIDSPGVREFGLW 276 N + + T+ ISD G HTTT + H ++ID+PGVR F ++ Sbjct: 189 N-FIAPDLNLKTSAISDKYDRGTHTTTQGEYFKIKALTSKGKEHSINIIDTPGVRHFAIY 247 Query: 277 HLEPEQITQGFVEFHDYLGLCKY-RDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 +EPE F E +G CK+ C H + GCAI EA+++G I + R+ ++ I + Sbjct: 248 GIEPEDTALYFPEMEKLIGSCKFGLSCTHTHELGCAILEALKKGNIHKDRYTSFELIHKE 307 Query: 336 MAQ 338 + + Sbjct: 308 LQE 310 >UniRef50_D2S5Q8 Ribosome small subunit-dependent GTPase A n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5Q8_9ACTO Length = 340 Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 120/215 (55%), Gaps = 7/215 (3%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +AAN+D +++V A+ L ++RYL P++VL K DL DD A + Q D Sbjct: 94 VAANVDLVLVVDALTTAPRLRRVERYLAVAWGSGATPVVVLTKADLCDDVPAALLAMQED 153 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 +G VL VSS T +GL + L GR + G SGVGKSSL NAL G + T Sbjct: 154 ---AVGVDVLPVSSVTGEGLDAVRALLGPGRTAAMVGPSGVGKSSLANALAGTEVAA-TR 209 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 I D G G+HTTTA L+ P GG ++D+PG+RE GL ++ + + + C Sbjct: 210 GIRDADGRGRHTTTARELHLLPGGGLLVDTPGMRELGL--VDDAGVGTAYADVTGLAAAC 267 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 ++RDC H T+PGCA+ A++EG++ R+ + ++ Sbjct: 268 RFRDCAHRTEPGCAVAAAIDEGRLDPARYTAWRKL 302 >UniRef50_A4XL75 Ribosome small subunit-dependent GTPase A n=2 Tax=Clostridia RepID=A4XL75_CALS8 Length = 290 Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 90/304 (29%), Positives = 152/304 (50%), Gaps = 26/304 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIV 97 G+++ V +G ++ C R R + + GD V E ++ Sbjct: 5 GVIVKAIAGFYYVYDREGTIYECKARGVFRKDDITPLVGDNVTI------VEKAKGAYVI 58 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPII 157 + + R + L RP PIA IV+V+++ PE+S +D+ LV +++P+I Sbjct: 59 DKILPRRNQLIRP-------PIANVDTAIVVVASVFPEVSFITLDKLLVNVLREKVKPLI 111 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSG 217 +NK+DL + + + V Q I+ IG VS+ T +G++ L+E + G+IS+FAGQSG Sbjct: 112 CVNKVDLDNGKTLEVVKNQYGIFEVIG-----VSAKTGEGMEKLKEHIKGKISVFAGQSG 166 Query: 218 VGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 VGK+S+LN L+ GL ++ +IS G+HTT L + D+PG + Sbjct: 167 VGKTSILNCLIPGLNLKV--GEISKKIERGRHTTRVVELLRAGEDTYIADTPGFSSIEIT 224 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + +++ + EF+DY CK+ C H +P C ++ AV + KI R+E Y +I + Sbjct: 225 GMLKDELKYYYPEFYDYEN-CKFPGCNHIFEPECGVKAAVNDRKINFERYERYKQIFMQL 283 Query: 337 AQVK 340 K Sbjct: 284 PAQK 287 >UniRef50_C4ZEV1 Putative ribosome biogenesis GTPase rsgA n=12 Tax=Firmicutes RepID=RSGA_EUBR3 Length = 302 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 127/232 (54%), Gaps = 10/232 (4%) Query: 116 VKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 ++P +NID +VI ++ P+ + N++DR+L E + I NK DL+ + Sbjct: 79 IRPAVSNIDMALVIFASAKPDPNFNLLDRFLCMMEYQHVPVTICFNKKDLITPQKQ---Q 135 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLG-LQKE 233 E IY GYRV+ S+ T +G+ ++ L GR + AG SGVGKSS++N L +Q E Sbjct: 136 ELKSIYEPAGYRVMFTSTKTGEGIDEIKHVLEGRTTTVAGPSGVGKSSIINCLQDDVQME 195 Query: 234 ILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDY 293 T IS+ G+HTT + + G ++D+PG + E E + + EF +Y Sbjct: 196 --TGHISEKIERGKHTTRHSEIIPIKDGTYIMDTPGFSSMDVPGFEKEDLWTCYPEFVEY 253 Query: 294 LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNF 345 C+++ C H +P C ++EA+ EGKI++ R++NY + E ++K R+ + Sbjct: 254 EPYCRFQGCSHINEPDCGVKEALSEGKISQVRYDNYKLLYE---ELKNRQKY 302 >UniRef50_Q04XB7 GTPase n=6 Tax=Leptospira RepID=Q04XB7_LEPBL Length = 318 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 21/307 (6%) Query: 41 EGIVISR-FGMHADVESADGDVHRCNIRRTIRSL--------VTGDRVVWRPGKPAAEGV 91 E +ISR +G + ++ S + V R +R +R++ V GD+++ P V Sbjct: 10 EFFIISRVYGAYYEIYSPERGVVRAFLRGRLRTVSAEERHPFVVGDQILAEPS------V 63 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQI-VIVSAILPELSLNIIDRYLVACET 150 ++ ER S LTR + + AN DQ V++S PE +DR L A Sbjct: 64 GKDWVICERLERKSFLTRKSREGDTQVLCANADQTAVLISLKSPETKDGFLDRCLAAVFA 123 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 +P+I+ K+DL+ ++ +M IYRN+GY VL +S T G+ L++ L +++ Sbjct: 124 SGTQPLILFTKLDLISEDE---AESRMKIYRNLGYPVLGISCTTGQGISELQKYLRRKMT 180 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGKS+L+N L Q + T+ IS + G+HTTT + L G +IDSPG+ Sbjct: 181 FLVGNSGVGKSTLINLLTRTQIQK-TSGISVSKDKGKHTTTNSLLLVLEDGTTLIDSPGI 239 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 +E+G+ HL+ E+I + F E C+ +C GCA+ A+E + R ++ Sbjct: 240 KEWGILHLKKEEILESFPELSSQKKHCEESNC-CKLSSGCAMLFALETESMTLERRKSLE 298 Query: 331 RILESMA 337 +L S+ Sbjct: 299 SMLASLG 305 >UniRef50_C6BVN5 Ribosome small subunit-dependent GTPase A n=2 Tax=Desulfovibrio RepID=C6BVN5_DESAD Length = 370 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 124/227 (54%), Gaps = 6/227 (2%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +AAN+D + IV + + ++ I+RYL + P++VL K DL +D + V+E Sbjct: 121 MAANLDTVFIVCGLDRDYNVRRIERYLTLVYNCNLSPVVVLTKADLHEDP-LECVDEVES 179 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 + G V +VS+ + G+ LE+ L+ G+ + G SG GKS+LLN L G + T Sbjct: 180 VA--FGVPVHLVSADDESGVLELEQYLSSGKTATMIGSSGAGKSTLLNRLYGNSVQ-QTG 236 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 +S + G G+HTTT + P GG +ID+PG+RE + E + F + DY C Sbjct: 237 AVSQSVGKGRHTTTGRDMIAMPQGGSLIDNPGIREIAFYS-EDGGVESSFADIEDYARYC 295 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 ++ DC H DPGC + +AVE G ++ R E+Y ++ + + R++ Sbjct: 296 RFSDCDHLNDPGCNVLQAVENGDLSTERLESYRKMKRELDYISQRQH 342 >UniRef50_Q02DD4 Ribosome small subunit-dependent GTPase A n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02DD4_SOLUE Length = 353 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/279 (33%), Positives = 141/279 (50%), Gaps = 21/279 (7%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSA 131 V GD V R P + IVE V R + +R P + +PIAANID + +V Sbjct: 62 VVGDWVAARVVGPG------QAIVEGVLPRRTFFSRRAPGRREDRQPIAANIDLVFLVCG 115 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS 191 + + +L ++RYL PI+VLNK DL DD F + +V+ Sbjct: 116 LDGDFNLRRLERYLTLAAESGASPIVVLNKSDLCDDLPARFAETV-----QVSGAAPIVT 170 Query: 192 SHTQD--GLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQH 248 HT+D G+ PL L GR G SGVGKSS++N L G + T ++ ++ G+H Sbjct: 171 IHTRDEAGIAPLRAWLAPGRTVALLGSSGVGKSSIVNCLAG-DARLRTAEVRESDSRGRH 229 Query: 249 TTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP 308 TTT L P G +ID+PG+RE LW E + + Q F E C++ DC H + Sbjct: 230 TTTHRELIVLPGSGLLIDTPGMRELQLWAGE-DALDQVFDEIAALAAGCRFGDCSHVAEV 288 Query: 309 GCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSD 347 GCA+++A+ G +A R+ +Y L+ A+V+ ++ +D Sbjct: 289 GCAVQQALAGGTLAPERWHSY---LKLRAEVRRHESMAD 324 >UniRef50_C5C2S6 GTPase EngC n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2S6_BEUC1 Length = 352 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 121/227 (53%), Gaps = 7/227 (3%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 IAAN+D +VI + P+ ++ ++R L P++VL K DL+DD +V + Sbjct: 105 IAANVDVVVIAEHLDPDPAVGRVERLLTLAWRSGATPLVVLTKADLVDD-AADWVADVGA 163 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 + +G VL VS+ T G+ L E + G + G SG GKS+L+NAL G E++ Sbjct: 164 VA--LGVDVLAVSATTGLGMSELRERIAPGTTLVVVGPSGAGKSTLVNALAG--TEVMAT 219 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 G G+HTT+ L P G +ID+PG+R GL P+ + + F + D + C Sbjct: 220 GDRRGDGKGRHTTSHRELVPLPGGATLIDTPGLRAVGL-VATPDAVAKTFSDVEDLVAQC 278 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 ++ DC HDT+PGCA+ AVE+G + E R ++ + M + R + Sbjct: 279 RFSDCAHDTEPGCAVLAAVEDGTLDERRLASWRSLQREMLRQAARSD 325 >UniRef50_D1J8S7 Probable GTPase engC n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8S7_MYCHP Length = 283 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 157/306 (51%), Gaps = 38/306 (12%) Query: 41 EGIVISRFGMHADVES-ADGDVHRCNIRRTIRSL----VTGDRVVWRPGKPAAEGVNVKG 95 EG ++ D++S D ++R +R L + GD V+++ Sbjct: 3 EGKIVKSVAGFYDIKSFEDKQIYRVRGGGKLRLLDIVPIVGDNVLFKKD----------- 51 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIE 154 E +++ +L R +F+ ++P AN+DQ IV++S + PE S ++D++L+ E+ ++ Sbjct: 52 --EFIYQ---ILGRKNFF--IRPKIANVDQAIVVMSLVEPEFSSLLVDKFLIIIESKNVK 104 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 PIIVL K DL D +AF Y++ GY V ++ T G + L E + S F G Sbjct: 105 PIIVLTKKDLTSDSKIAF-------YKDQGYEVFEINYETGQGFEGLGEIFKHKTSFFVG 157 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 Q+GVGK++L+N L E T IS G+HTT L F +GG++ID+PG Sbjct: 158 QTGVGKTTLINYLAKTNFE--TQAISKALNRGKHTTREVSLIDF-NGGEIIDTPGFSSIE 214 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYR-DCKH--DTDPGCAIREAVEEGKIAETRFENYHR 331 + L E++ F F + CK+R CKH ++ C +++ V +GKI + R++NY Sbjct: 215 -FDLTIEELPIAFKSFREAASKCKFRTSCKHYLESVEDCEVKKLVLQGKIKQERYDNYIS 273 Query: 332 ILESMA 337 L+ + Sbjct: 274 FLKRLT 279 >UniRef50_C6D8C7 Ribosome small subunit-dependent GTPase A n=2 Tax=Bacillales RepID=C6D8C7_PAESJ Length = 370 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 6/227 (2%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 + AN+D + I +A+ + ++ ++RYL+A P+I+L K DL DD F QM+ Sbjct: 120 VGANMDYLFITNALNQDFNVRKMERYLIAAWESGASPVILLTKADLCDDP--EFFAAQME 177 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 G V ++S+ G + L L G+ G SGVGKS+LLN L + + T Sbjct: 178 -SAAPGVPVHLISALQNQGKEQLLPYLQPGKTIAVTGSSGVGKSTLLN-WLADENIMETQ 235 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 I + G+HTTT L+ P G V+D+PG+RE LW + + Q F + C Sbjct: 236 GIRETDARGRHTTTHRELFLLPSGALVMDTPGMRELQLWDAH-DGLEQAFSDIEALAAGC 294 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 +YRDC+H++DPGCA+ +A+E+G + R NY + + ++ + ++N Sbjct: 295 RYRDCRHESDPGCAVLQAIEDGTLEAKRLHNYRKTAKELSHLARKEN 341 >UniRef50_B5RLH3 Putative ribosome biogenesis GTPase rsgA n=22 Tax=Borrelia RepID=RSGA_BORDL Length = 313 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/225 (36%), Positives = 126/225 (56%), Gaps = 9/225 (4%) Query: 119 IAANIDQIVIVS-AILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAF-VNEQ 176 I +NID I+IVS A LPE + IDR L+ E I PII++NK+D EG+ V+ Sbjct: 87 IVSNIDNILIVSSATLPEFKNSFIDRTLIVAEEQGITPIILVNKVD----EGINLRVDSF 142 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 + IY +GYRV+ S T G+ +++ + + F GQSGVGKSSL+N ++ L Sbjct: 143 IKIYEYLGYRVIKTSVVTLQGIDEVKKIIKNSRTSFIGQSGVGKSSLIN-VIDLNASQAI 201 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 N+IS G+HTT A +H +ID+PG++EFG+ L ++ F EF + L Sbjct: 202 NEISYKYARGRHTTVYAVAFH-SDNKILIDTPGIKEFGIEGLGYLELKYYFKEFKYFNDL 260 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKT 341 C++ C H +P C + + KIAE R+ +Y +I + + K+ Sbjct: 261 CRFNSCLHINEPNCFVISQI-GFKIAEARYNSYLKIFSELKRYKS 304 >UniRef50_Q08XU7 Ribosome small subunit-dependent GTPase A n=2 Tax=Cystobacterineae RepID=Q08XU7_STIAU Length = 361 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/265 (32%), Positives = 141/265 (53%), Gaps = 17/265 (6%) Query: 86 PAAEGVNVKGIVEAVHERTSVLTRPDF---YDGVKPIAANIDQIVIVSAILPELSLNIID 142 P EG + +++AV R VL R + ++G + IAAN+D + +V+ + + I+ Sbjct: 79 PQGEG---EALLQAVLPRRGVLVRREAGSEHEG-QLIAANLDVVFLVAGLDGNFNPRRIE 134 Query: 143 RYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI--GYRVLMVSSHTQDGLKP 200 R L P+++L+K DL +D V ++ R + G V +S+H GL Sbjct: 135 RGLAVAWKSGATPVVLLSKADLHED-----VPARLAEVRALAPGVSVFALSTHLGTGLDE 189 Query: 201 LEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 + L G+ + G SGVGKS+L+N LL ++ + T + + G+HTTT L+ P Sbjct: 190 VRACLPPGKTGLLLGSSGVGKSTLVNRLLE-EERLATQSVRVDDNKGRHTTTHRELFMLP 248 Query: 260 HGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEG 319 GG +ID PGVRE GLW E E + Q FV+ C++ +C H +PGCA+R VE G Sbjct: 249 QGGLLIDGPGVRELGLWG-EEEGVEQAFVDVLTLAAGCRFSNCGHQREPGCAVRAEVEAG 307 Query: 320 KIAETRFENYHRILESMAQVKTRKN 344 ++++ R +++ ++ A + + N Sbjct: 308 RLSQERLDHFEKLQREQAHKERQTN 332 >UniRef50_C0A6W9 Ribosome small subunit-dependent GTPase A n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6W9_9BACT Length = 378 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 84/233 (36%), Positives = 118/233 (50%), Gaps = 7/233 (3%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 IAANID + +VS + + I R+LVA EP++VLNK DLL D A + Sbjct: 112 IAANIDTVFLVSGLDRNHNPARIQRFLVAARESGAEPVVVLNKSDLLSDPRAADAVRREI 171 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEE-ALTGRISIFAGQSGVGKSSLLNALL-----GLQK 232 G VL+ S T+ GL+ L+ A GR F G SGVGKSSL+NAL Sbjct: 172 EQLVPGVTVLVTSIETRKGLRILQRYAKPGRTLAFVGSSGVGKSSLINALACDDGNDDDS 231 Query: 233 EILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD 292 + T ++ + G+HTTT L G VID+PG+RE LW + + + + F + Sbjct: 232 ALPTAEVREKDSKGRHTTTRRELVVSRSGALVIDTPGMRELQLWDAD-DGVEEAFADIAA 290 Query: 293 YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNF 345 CK+ C H +PGCA+R AVE G +A R E+Y ++ + R+ Sbjct: 291 LAVRCKFGRCHHRNEPGCAVRAAVESGALAAERLESYRKLKAEQVAARARQKI 343 >UniRef50_C8WW82 Ribosome small subunit-dependent GTPase A n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW82_ALIAD Length = 292 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 142/283 (50%), Gaps = 26/283 (9%) Query: 58 DGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY 113 DG V RC R + +++ GD V + P G +GI+ V R + L RP Sbjct: 19 DGQVRRCRARGVFKVKGTTVLVGDFVRYEP-----VGAQ-EGIIREVLPRRTELIRP--- 69 Query: 114 DGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAF 172 PIA N+D +V+ S + P+LS ++D+ L+ +EP I K DL+ E Sbjct: 70 ----PIA-NVDHVVVACSFVTPDLSFYMLDKTLLQASVAGVEPTIAFTKADLVSPE---L 121 Query: 173 VNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL-GLQ 231 + +++YR +GY + V++ +G+ L L GR+++ AG SG GKS+L NAL G+ Sbjct: 122 ASATVELYRRLGYEAVAVAAKQGEGVSVLRARLQGRVTVLAGPSGAGKSTLANALAPGIS 181 Query: 232 KEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFH 291 + T ++S+ G G+ TT L + D+PG + + + ++ F EF Sbjct: 182 FK--TGEVSEKIGRGRQTTRHVELVRLDDATWMADAPGFSQLQV-PVASREVRLHFPEFR 238 Query: 292 DYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 C YRDC H + CA++ AVEEG + R+ +Y ++ E Sbjct: 239 PLAQECAYRDCLHLDEDNCAVKRAVEEGHVPAPRYMSYRQLYE 281 >UniRef50_D1VSD9 Ribosome small subunit-dependent GTPase A n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSD9_9FIRM Length = 285 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 87/300 (29%), Positives = 150/300 (50%), Gaps = 26/300 (8%) Query: 41 EGIVISRFGMHADVESADGDVH---RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIV 97 +G ++ G ++S D + R R S + GD V + N G + Sbjct: 2 QGKIVKLLGGFYYIKSGDKLIETRARGTFRYVKESPIVGDNVEFNYDD------NTLGYI 55 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPI 156 + ++ R ++LTRP AN+D IV+ + P+ +L +ID+ +V E I+ + Sbjct: 56 QKIYPRKNILTRPK--------VANVDLIVLFIPLKNPDYNLTLIDKTIVQIEISNIDIL 107 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I +NK D+ ++ IY + G+ +++S T + L+E L G+ FAG S Sbjct: 108 IAINKADI----DISKAENLQKIYNSCGFNTILISGKTGLNIDTLKEKLRGKTVAFAGVS 163 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 G GKS++ + L L K+I + ++S +G G+HTT L H+ + D+PG + Sbjct: 164 GAGKSTI--SSLILDKKIESGEVSQKTGRGKHTTRHTEL-HYNSDYFIFDTPGFSSLDI- 219 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 L+ + + F EF +YLG CK+ +C H +P C I+ VE G+I +R+ENY + + + Sbjct: 220 KLDKKDLCHYFREFENYLGQCKFLNCNHINEPDCMIKRKVENGEIPISRYENYKYLYQEL 279 >UniRef50_D1ALR3 Ribosome small subunit-dependent GTPase A n=10 Tax=Bacteria RepID=D1ALR3_SEBTE Length = 358 Score = 134 bits (336), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 125/221 (56%), Gaps = 12/221 (5%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +AANID I I ++ + ++ I+RYL P+IVL K DL DD + E++D Sbjct: 109 VAANIDIIFICMSLNSDFNIRRIERYLAVTWDSMATPVIVLTKSDLCDD-----LQEKLD 163 Query: 179 IYRN--IGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEIL 235 + IG V++ SS ++G + + + G+ F G SGVGKS+L+N L G + + + Sbjct: 164 ELSSVSIGIDVIVCSSEDENGYQAVSSYIEKGKTIAFIGSSGVGKSTLINRLAGDENQAV 223 Query: 236 TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG 295 +I G+HTTT +L P+GG VID+PG+RE L+ I++ F + + Sbjct: 224 -QEIRKGDDKGKHTTTYRQLKLLPNGGIVIDTPGMRELQLY---TGDISKTFEDIEELAA 279 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 CKY++C H ++PGC +R A+E G ++E RF +Y ++ M Sbjct: 280 QCKYKNCSHVSEPGCMVRNAIENGILSEERFGSYLKLQREM 320 >UniRef50_B2GD51 Putative ribosome biogenesis GTPase rsgA n=57 Tax=Lactobacillales RepID=RSGA_LACF3 Length = 296 Score = 134 bits (336), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 93/284 (32%), Positives = 143/284 (50%), Gaps = 26/284 (9%) Query: 63 RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIA 120 R N R+ V GD+V + EA ++R L + P V+P+ Sbjct: 28 RGNFRKRGLKPVVGDQVEF----------------EAENQREGYLLKILPRKNQLVRPMV 71 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN+D V+V+A+ P LS N++DR LVA E+ I+P+I +K DLL D+ + + Sbjct: 72 ANVDLAVVVTAVKEPNLSTNLLDRQLVALESQGIDPVIYFSKTDLLSDQEADALMLVVKG 131 Query: 180 YRNIGYRVLMV-SSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTND 238 Y+ IGY VL ++ L L + LTG++ GQ+G GKS+LLN L + T + Sbjct: 132 YQMIGYPVLYQRPPFGEEALGELRKILTGKVVTMMGQTGAGKSTLLNHL-APDLNLATGE 190 Query: 239 ISDNSGLGQHTTTAARLYHFPHGGDVI--DSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 IS G+HTT L GD + D+PG + + + E++ F E Sbjct: 191 ISQALKRGRHTTRKVSLMQV---GDALIADTPGFSSYEDFQMTVEELPHFFPEMQALAPE 247 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 CK+R C H +P CA++ A++ GKI +R++NY + E +A K Sbjct: 248 CKFRGCLHIKEPSCAVKNALKHGKIMNSRYDNYLQFHELIANQK 291 >UniRef50_Q14LR6 Conserved hypothetical duf258 gtpase protein n=1 Tax=Spiroplasma citri RepID=Q14LR6_SPICI Length = 289 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 130/245 (53%), Gaps = 17/245 (6%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQ 152 +GI+ + R + L RP AN+DQ+VI++A+ P + ++++YL E Sbjct: 56 QGIIYQIEPRKNKLYRPRI--------ANVDQVVIITAMAEPTFNSYLLNKYLAFIEYKN 107 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG--LKPLEEALTGRIS 210 ++P+IV K DLL + + + + Y +GY V +S+ D + E+ +IS Sbjct: 108 LKPVIVFTKKDLLKTDEL--YQKYFNWYPKLGYEVYFISNKKDDKKIWQQFEQLFQNKIS 165 Query: 211 IFAGQSGVGKSSLLNALLGLQKEIL-TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 + GQ+G GKSS LN LL Q EI+ T +IS G G+HTTT + LY +G V D+PG Sbjct: 166 VLTGQTGSGKSSTLNTLL--QAEIIKTQEISKALGRGKHTTTTSALYELLNGM-VADTPG 222 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 F L E ++ + + F+ Y CK+R C H +P C I+ V+ I + + +Y Sbjct: 223 FSTFDLRDYEKGELARSYHFFNQYANECKFRTCLHLHEPHCKIKALVQANIIPQFFYNDY 282 Query: 330 HRILE 334 RI++ Sbjct: 283 VRIMQ 287 >UniRef50_D0J0X0 Ribosome small subunit-dependent GTPase A n=10 Tax=Betaproteobacteria RepID=D0J0X0_COMTE Length = 328 Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 23/318 (7%) Query: 37 GEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGI 96 G+ G+V++ +G H VE+ DG+ C+ R V GD V W P G +G Sbjct: 14 GDTQTGLVVASYGRHCVVETPDGERRICHPRGKKSQAVAGDHVQWLAPPP---GQGDEGT 70 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPI 156 +E + ER +V R D K AAN+DQ++I+ A P S + R L+A E I+PI Sbjct: 71 IEKIVERRNVFYRQDDIR-TKTFAANLDQLLILIAAEPVFSEVQLARALIAAEAAHIKPI 129 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNI--------GYRVLMVS--SHTQDGLKPLEEALT 206 I LNK+DL +E ++++ YR + Y VL +S + + L Sbjct: 130 IALNKMDL--EEPFLRAWQRLEPYRTMRDAANAAPHYMVLPLSLEDADDEDRDAIIGLLE 187 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG--GDV 264 G+ ++ G SGVGKS+L+N LL K + TN+IS G+HTTT+ LY + Sbjct: 188 GKTTLVLGPSGVGKSTLINLLLPDAK-VATNEISQALNTGKHTTTSTTLYWVDEARTTAI 246 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEG----K 320 IDSPG +EFGL+H+ Q+ + CK+ +C H +PGCA+ VE Sbjct: 247 IDSPGFQEFGLYHIAATQLAACMPDIGALADQCKFYNCTHLHEPGCAVMAQVEAQDSPHS 306 Query: 321 IAETRFENYHRILESMAQ 338 I+ R+ Y + + ++Q Sbjct: 307 ISANRYRIYGELFDELSQ 324 >UniRef50_C5BLQ5 Putative GTPase EngC protein 2 n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLQ5_TERTT Length = 392 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/243 (35%), Positives = 133/243 (54%), Gaps = 14/243 (5%) Query: 97 VEAVHERTSVLTRPDFYDGVK--PIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 +E V ER S+ R + + PIAANID + IVS+ E + ++RYL C+ Sbjct: 118 IEQVLERKSLFKRIGSGNTTQFQPIAANIDVVFIVSSCNDEFKESRLERYLALCDEAGAI 177 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL-MVSSHTQDGLKPLEEALTGRISI-F 212 P+I+L K+DLLDD G ++ + + V+ + T DG+K E G +I Sbjct: 178 PVIILTKVDLLDDAG-GYIERARSVQSGVAVEVVNALDPSTLDGVKGWIE---GNSTIAL 233 Query: 213 AGQSGVGKSSLLNALLGLQKEIL--TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGKS+LLNA L +E L T I ++ G+HTTT LY GG +ID PG+ Sbjct: 234 VGSSGVGKSTLLNA---LAEETLAATGSIREDDKKGRHTTTHRELYFLASGGLIIDVPGM 290 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE + ++ + + F + + C++ DCKH +PGCA+ A+EEG+++ R +Y Sbjct: 291 RELRVADVD-DALGHVFEDIEELSEKCRFIDCKHMNEPGCAVLAAIEEGRLSGRRLASYQ 349 Query: 331 RIL 333 +++ Sbjct: 350 KLV 352 >UniRef50_B2UNU0 GTPase EngC n=3 Tax=Verrucomicrobiales RepID=B2UNU0_AKKM8 Length = 373 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/273 (30%), Positives = 139/273 (50%), Gaps = 15/273 (5%) Query: 76 GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAIL 133 GD V PG+ E V + + R + +R P + + N+D + +V+ Sbjct: 71 GDWVAIDPGEAGDEAV-----IRTILPRQTCFSRKAPGKSSAEQVLGTNVDIVAVVTEPG 125 Query: 134 PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG--YRVLMVS 191 + + ++RY P+I+LNK DL E V M I R + ++ +S Sbjct: 126 TDFNPRRMERYFTLIRRSGASPLILLNKTDLFSREE---VENAMQILRELSPECAIISIS 182 Query: 192 SHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTT 250 + G+ + L+ G+ G SGVGKS+L+N LLG + + T ++++ +G G+HTT Sbjct: 183 ALHNRGITEFRKCLSKGKTICIVGSSGVGKSTLVNTLLG-DEWLWTGEVNEVTGKGRHTT 241 Query: 251 TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGC 310 A L HGG +ID+PG+RE +W E + + F + + CK+ DC H D GC Sbjct: 242 VARELVLLKHGGLLIDNPGIREIQMWTDE-HTLRESFADLTELAHECKFADCSHGKDSGC 300 Query: 311 AIREAVEEGKIAETRFENYHRILESMAQVKTRK 343 AIR+AV+EGK+ + R+ N+ + +A++ R+ Sbjct: 301 AIRKAVDEGKLDKERYLNFLNLENEIARLAKRQ 333 >UniRef50_Q044G6 Putative ribosome biogenesis GTPase rsgA n=27 Tax=Lactobacillus RepID=RSGA_LACGA Length = 297 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/303 (29%), Positives = 160/303 (52%), Gaps = 24/303 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 +G ++S + DVE + +V R R R + GDRVV + +G+N + Sbjct: 5 QGTIVSAISGYYDVE-IENEVVRTRARGVFRDRKQKPLVGDRVVVQLDN---QGMNY--L 58 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEP 155 +E + RT+ + RP AN+ ++++V SA+ P+ SL ++DRYL + Sbjct: 59 IE-ILPRTNEIGRP--------AVANVSKVLLVISAVEPDFSLELLDRYLTFFAWKNVGV 109 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +I L+K D+ E + + ++D Y+ IGY V + + L + + +I AGQ Sbjct: 110 VIYLSKADITPTEKLKAIKCKLDYYQKIGYSVFEDAEELERQLPTMIQ--KDQIWTLAGQ 167 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SG GKS+LLN L + T IS G+HTT +L+ + G + D+PG L Sbjct: 168 SGAGKSTLLNKLENEANQ-ETGAISTALNRGKHTTRQVKLFKYSSGF-IADTPGFSAIDL 225 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 + ++ +++ F + D CK+R C+H +PGC +++ +EEGKIA++R+++Y +I + Sbjct: 226 FKIKVDELENYFYDLKDASVKCKFRRCQHIKEPGCEVKKLIEEGKIAKSRYDSYLKIRQE 285 Query: 336 MAQ 338 +++ Sbjct: 286 ISE 288 >UniRef50_B1C5S8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S8_9FIRM Length = 292 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 140/253 (55%), Gaps = 19/253 (7%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQ 152 +G +E + ER S+L RP +N+D I+IV A+ P++S ++D+ ++ Sbjct: 55 EGSIEEIIERKSLLIRPSI--------SNVDNIIIVCAVKEPDISFFLLDKMIINAGIKN 106 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 + I NK DL DD ++ E+ Y+N G+ ++ S+ T +G+ ++ L + S+F Sbjct: 107 ADLTICFNKCDLADDTFKDYLKEE---YKNSGFNLIFTSNVTGEGIDEVKSLLKDKSSVF 163 Query: 213 AGQSGVGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 G SG GKSSL+N+L G E T+ +S G+HTT + L+ + D+PG Sbjct: 164 MGVSGAGKSSLINSLFEGYNLE--TSHVSRKIKRGRHTTRHSELFMEDENTFIADTPGFS 221 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 ++ +E E + + EF Y+ CK+ +C H +P C +++AV+EG I++ R++ Y + Sbjct: 222 SLEVFDVEKEDLYHYYNEFIPYIN-CKFPNCVHINEPVCGVKDAVKEGNISKLRYDTYKQ 280 Query: 332 ILESMAQVKTRKN 344 I E ++K+++N Sbjct: 281 IYE---EIKSKEN 290 >UniRef50_Q8A8H7 Putative ribosome biogenesis GTPase rsgA 1 n=9 Tax=Bacteria RepID=RSGA1_BACTN Length = 355 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 141/267 (52%), Gaps = 26/267 (9%) Query: 75 TGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPD--FYDGVKPIAANIDQIVIVSAI 132 TGD V+++P KGI+ + R L R + IA+ +D+ IV ++ Sbjct: 71 TGDWVIFQPFDAN------KGIIVDILPRERALYRKKNGRVADRQAIASYVDKAFIVQSL 124 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDL-----LDDEGMAFVNEQMDIYRNIGYRV 187 ++ +R++ +I+P++VLNK DL DE + + Q + V Sbjct: 125 DDNFNVRRAERFIAQVMEEKIKPVLVLNKADLGCDRQKIDEAIKHIARQ--------FPV 176 Query: 188 LMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEIL-TNDISDNSGL 245 + S + L E++T G +F G SGVGKSSL+NAL G K +L T+DIS ++G Sbjct: 177 FITSIRQPQTILRLRESITKGETVVFVGSSGVGKSSLVNALCG--KSVLNTSDISLSTGK 234 Query: 246 GQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHD 305 G+HT+T + G +ID+PGVREFGL P+ +T+ F E DY C++ DCKH Sbjct: 235 GRHTSTRREMVLMDGSGVLIDTPGVREFGLAIDNPDSLTEMF-EISDYAESCRFSDCKHI 293 Query: 306 TDPGCAIREAVEEGKIAETRFENYHRI 332 +PGCA+ EAV G + +E+Y ++ Sbjct: 294 DEPGCAVLEAVHNGTLDHKVYESYLKL 320 >UniRef50_D1AJL1 Ribosome small subunit-dependent GTPase A n=2 Tax=Fusobacteriaceae RepID=D1AJL1_SEBTE Length = 293 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 85/284 (29%), Positives = 142/284 (50%), Gaps = 29/284 (10%) Query: 56 SADGDVHRCNIRRTIR------SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR 109 ++D +++ C +R ++ + + GD V + + A + V ER + L R Sbjct: 16 NSDNNIYECKLRGALKIKNDKLNCIVGDIVEFDEKEQA---------ICKVFERENYLDR 66 Query: 110 PDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD- 167 P + +NID I AI P+ + L+ I P ++ K+DL+ D Sbjct: 67 P--------LISNIDYAGITFAIKSPDFDYTNFQKVLLNVYDRNITPFVIFTKVDLISDT 118 Query: 168 EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL 227 E F + ++ + V V + L L E + G+I+ F+G SGVGKS+L+N L Sbjct: 119 ELKEFTDNFHMVFSTLELDVFPVIATDDTALSDLREFIAGKITAFSGPSGVGKSTLINNL 178 Query: 228 LGLQKEIL-TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL-EPEQITQ 285 L ++IL T DIS+ + G+HTTT +R++ + ++D+PG L E +++ Sbjct: 179 LN--EDILRTGDISEKTDRGKHTTTESRIFELDNSTLIVDTPGFSSLDFPKLKEKTALSR 236 Query: 286 GFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 F +F DY LCK+RDC H +P C ++ A+E KI + R+E Y Sbjct: 237 LFPDFQDYSVLCKFRDCTHINEPECGVKSALENAKIPKLRYEFY 280 >UniRef50_D2NNY6 Predicted GTPase n=2 Tax=Rothia mucilaginosa RepID=D2NNY6_9MICC Length = 440 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 132/274 (48%), Gaps = 32/274 (11%) Query: 99 AVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPI 156 A+ R S LTRP +P+AAN+D + IV PE S+ I+RY ++ Sbjct: 141 AILPRRSYLTRPSATRESADQPVAANVDMLCIVEPCFPEPSIGRIERYTALAHASGVQVA 200 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 ++L K DL+ E +A E + + VL V + P+ + + GR + F G+S Sbjct: 201 LILTKGDLVTAEQLASYRESLGGSVDT---VLTVCTDNGYDPAPVAKLVAGRTAAFLGRS 257 Query: 217 GVGKSSLLNALLGL----------QKEILTNDISDNSGLGQHTTTAARLYHFP------- 259 G GKS+L+NALL + +T+ + D G G+HTTT+ ++ P Sbjct: 258 GAGKSTLVNALLNPGVDPREDSQEHQVQVTSTVRDADGKGRHTTTSRQMLVLPGAEGSSE 317 Query: 260 ---------HGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGC 310 G +ID+PGVR + I + F + Y C+Y DC H ++PGC Sbjct: 318 GDSTNAKSSSGTVLIDTPGVRALAATS-DSTAIDETFDDVSGYASACRYSDCSHGSEPGC 376 Query: 311 AIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 A+++A+ +G + RFE Y R++ A+++ R Sbjct: 377 AVQQAITDGSLDPERFERYRRMIAESARLRLRSQ 410 >UniRef50_Q8ETB7 Putative ribosome biogenesis GTPase rsgA 1 n=1 Tax=Oceanobacillus iheyensis RepID=RSGA1_OCEIH Length = 351 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 130/227 (57%), Gaps = 5/227 (2%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +A+N+ ++ IV + +L+ ++RYL A P IV +K+DL D M + E D Sbjct: 107 VASNVTKVFIVISADEDLNERKLERYLTAVWESGASPHIVFSKVDLASD--MDSIIEHAD 164 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEALTGRISI-FAGQSGVGKSSLLNALLGLQKEILTN 237 G + ++ ++G + + + S+ G SG GKS+L+NALL +K + T Sbjct: 165 SIA-FGIPLYKWNATNEEGKEDILANIHEDDSVVLIGSSGAGKSTLINALL-TEKVLKTG 222 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 + ++ G+HTTT L++ P GG +ID+PG+RE LW + + ++ F + + + C Sbjct: 223 SVREDDKRGRHTTTHRELFNLPTGGVIIDTPGMRELQLWTEDGDTLSHTFSDINHLIAEC 282 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 K+ DCKHDT+P CA++EA+E G + E R+ +Y ++ +A ++ ++N Sbjct: 283 KFTDCKHDTEPDCAVKEALETGDLEEGRWNSYLKLQRELAYIERKQN 329 >UniRef50_C7IKW3 Ribosome small subunit-dependent GTPase A n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IKW3_9CLOT Length = 349 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/230 (33%), Positives = 132/230 (57%), Gaps = 14/230 (6%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD--EGMAFVNEQ 176 +AAN+D + ++ ++ + ++ ++RYL+A P++VL K D DD + +A Sbjct: 104 VAANVDTVFLIQSLNRDFNMKRLERYLIAAWDSGALPVVVLTKADCCDDIPQKLAVATAS 163 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEE-ALTGRISIFAGQSGVGKSSLLNALLGLQKEIL 235 G V+ +SS T +GL+ +++ L G+ G SGVGKS+LLN L KE+L Sbjct: 164 AP-----GVEVISISSKTGEGLEEIKKFLLPGKTIALLGSSGVGKSTLLNTLA--DKELL 216 Query: 236 -TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP-EQITQGFVEFHDY 293 T++I ++ G+HTTT L P GG ++D+PG+R +W + +I G VE Sbjct: 217 KTHEIREDDSRGRHTTTHRELVLLPGGGILMDTPGMRALSIWESDTGMEIMFGDVE--KL 274 Query: 294 LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRK 343 G C++ DCKH +PGCA+R A+ G++ R+E++ ++ + MA ++ +K Sbjct: 275 TGQCRFYDCKHQNEPGCAVRFALNSGELDIARWESWLKLQKEMAHLEAKK 324 >UniRef50_UPI0001698EA9 ribosome-associated GTPase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698EA9 Length = 174 Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 81/181 (44%), Positives = 106/181 (58%), Gaps = 8/181 (4%) Query: 45 ISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVK-GIVEAVHER 103 I R G V G + C R+ I V GDRVVW + ++ K G+V A+ R Sbjct: 1 IIRHGATLMVVDESGQLFNCRTRQNIGHPVCGDRVVW-------QAIDEKSGVVTALLPR 53 Query: 104 TSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKID 163 SVL+RPD+ KP+AANI IV+V A PE S ++D+YLV ET+ + +I +NKID Sbjct: 54 ESVLSRPDYAGREKPLAANISLIVVVLAPRPEPSGYLLDQYLVTAETINVPALIAINKID 113 Query: 164 LLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSL 223 LL + Q D YR+IGY V+ VS+ + GL PL EAL + SI GQSGVGKSSL Sbjct: 114 LLQGDERDRFLRQFDCYRSIGYPVVEVSATLEHGLDPLVEALHDQRSILVGQSGVGKSSL 173 Query: 224 L 224 + Sbjct: 174 I 174 >UniRef50_C0VZX3 Possible GTP-binding protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZX3_9ACTO Length = 351 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 121/368 (32%), Positives = 176/368 (47%), Gaps = 38/368 (10%) Query: 1 MSKNKLSKGQQR-RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADG 59 MSK + R RV R +T K +PDY D EG + S V D Sbjct: 1 MSKRDIGTDDPRVRVRPGKGTRPRT-KIRPDYSDC-----PEGFIFSVDRGRYHVRFEDR 54 Query: 60 DVHRCNIRRTIR-SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR----PDFYD 114 + R R S+V GD VV G + + IV +V+ER+SVL R D Sbjct: 55 LLMAVKSRELGRGSIVVGD-VVKLNGDLSGRKDTLARIV-SVNERSSVLRRSGEDADTKG 112 Query: 115 GVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFV 173 K + AN D +VIV+A+ P + IDR LVA + PI+ L K DL D + + + Sbjct: 113 REKTMVANADNVVIVTAMTNPPVRPGFIDRCLVAAYDAHMRPIVCLTKADLGDPDNVISL 172 Query: 174 NEQMDIYRNIGYRVLMVSSHT-----QDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL 228 E + + ++SS+ Q G + L E ++G+ S+ G SGVGKS+L+NA+L Sbjct: 173 CESLGV-------TTVISSNQEGHEHQFGYEKLIELISGQTSVLIGHSGVGKSTLINAIL 225 Query: 229 GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFV 288 + E LT D++ +G G+HT+T P GG +ID+PG+R FGL H+EP+ + F Sbjct: 226 P-EAERLTGDVNQVTGRGRHTSTNMIALELPEGGWIIDTPGIRGFGLAHVEPDTVIDAFP 284 Query: 289 EFHDYLGLCKYRDCKH-DTDPGCAIREAVEEGK------IAETRFENYHRILESM--AQV 339 E D + C R C H ++ C + V+ G R + R+LES+ AQ Sbjct: 285 ELEDAIEDCP-RSCNHLESAVDCGLDAWVKAGADEADAVYRANRLASIRRLLESLKTAQE 343 Query: 340 KTRKNFSD 347 K + D Sbjct: 344 KPWETVRD 351 >UniRef50_C6PE63 Ribosome small subunit-dependent GTPase A n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PE63_CLOTS Length = 291 Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 79/250 (31%), Positives = 134/250 (53%), Gaps = 15/250 (6%) Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQI 153 G + +H R + L RP P++ N+DQ +I +I+ P L+ +D+ ++ E I Sbjct: 55 GFIINIHNRKNELVRP-------PVS-NVDQAIITFSIVNPALNRLQLDKMIILVELNGI 106 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 P+I +NKIDL+ ++ A ++Y+N+GY V+ S G+ L+ + G+ S F Sbjct: 107 HPVICINKIDLVTEDVFA---PLYNLYKNLGYDVIATSKFDNIGIDKLKAMIIGKTSFFT 163 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKSSL+N + G K+ + D+S+ G+HTT L F +G V+D+PG Sbjct: 164 GPSGVGKSSLINCIQGTNKQEI-GDLSEKLLRGKHTTRNVELIPFENGY-VLDTPGFTSL 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 L ++ ++ F +F +Y C+++ C H +P C ++ AV G I + R+ NY + Sbjct: 222 NL-DIDETELKYYFRDFRNYELDCRFKSCLHINEPDCGVKIAVSNGLIDKIRYSNYLNLY 280 Query: 334 ESMAQVKTRK 343 + K R+ Sbjct: 281 NELKSNKRRR 290 >UniRef50_C7RGU6 Ribosome small subunit-dependent GTPase A n=4 Tax=Anaerococcus RepID=C7RGU6_ANAPD Length = 290 Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 141/252 (55%), Gaps = 11/252 (4%) Query: 96 IVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQ 152 +++ + +R + +T P + +P +NIDQI++ + I P L+L +D+YL CE Sbjct: 45 VIDDLEDRKAYITEILPRKNEIKRPNISNIDQILLFATIKDPILNLYNLDKYLAMCEYKD 104 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 ++ +IVL+KIDL D+ V + +IY NIGY+++ + + + + + L + S Sbjct: 105 MDVVIVLSKIDLCDENE---VKDFENIYENIGYKLISLDNFDNFPKEKILDILKNKTSAV 161 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 +G SGVGKS+ LN L+ + E+ T IS+ S G++TT ++ + D+PG Sbjct: 162 SGASGVGKSTFLNNLIDI--EVETGSISEKSKRGKNTTRHTEIFKIGDESFLFDTPGFDS 219 Query: 273 FGLWHLEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 F + +E E ++ F EF D CK++DC H +P C ++ + +G I+++R++NY Sbjct: 220 FDIDFIEDEKELKYLFREFRD--KRCKFKDCNHINEPACGVKSYLADGLISKSRYDNYLM 277 Query: 332 ILESMAQVKTRK 343 + E + + + K Sbjct: 278 LFEEVKKRRENK 289 >UniRef50_Q729X9 GTP-binding protein, putative n=4 Tax=Desulfovibrio RepID=Q729X9_DESVH Length = 348 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 126/226 (55%), Gaps = 18/226 (7%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGM----AFVN 174 IAAN+D IV + + N ++RYL ++P++VL K D++ E + A V+ Sbjct: 107 IAANVDVAFIVQSCHYDFCPNRLERYLFMVREGGVKPVVVLTKTDMVSAEALEGLVAVVH 166 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKE 233 D+ V+ S+++ DG+ ++ A+ G+ G SGVGK++L N LLG +E Sbjct: 167 SVADV------DVIATSAYSGDGVDAVKAAVEAGKTCCLLGSSGVGKTTLTNLLLG--RE 218 Query: 234 ILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFV--EFH 291 + +G G+H TT ++ GG ++D+PG+REFG+ E E+ GFV Sbjct: 219 LFATQHVSATGEGRHQTTRRQMVILSGGGLLVDTPGMREFGVIGPESEE---GFVGEAVE 275 Query: 292 DYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 G C++ DC+H+ +PGCA+R A+E G +++ R++NY R+ + A Sbjct: 276 RLAGSCRFHDCRHEREPGCAVRAALEAGTLSQERYDNYIRLRKEAA 321 >UniRef50_B5JHE4 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHE4_9BACT Length = 374 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 124/234 (52%), Gaps = 10/234 (4%) Query: 117 KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 + I AN D + +V+ + + + I RYL + E +IVLNK DL DD + E Sbjct: 108 QSIVANFDSLFLVTGLDEDFKTSRIQRYLSLAWNSRRELVIVLNKADLRDD-----LPEV 162 Query: 177 MDIYRNIGYRVLM--VSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKE 233 ++ + V + VS+H + L+ L L GR G SGVGKSSL+NA LG + Sbjct: 163 LEAVEKVAGEVPVHAVSAHDRSSLECLFGYLGKGRTVALLGSSGVGKSSLVNAFLG-EDR 221 Query: 234 ILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDY 293 + T G G+HTTT L P GG +ID PG+RE L E + + + F + + Sbjct: 222 LPTQQNRAADGRGRHTTTWRELQMIPSGGVLIDLPGMRELQLTG-EGDGVVKAFEDVEEL 280 Query: 294 LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSD 347 + CK+R+C+HD +PGCAI A+E G++ +R++ Y ++ E A R+ D Sbjct: 281 MLRCKFRNCRHDGEPGCAIEAAIESGELDASRYQQYVKLNEEHAVAHARREARD 334 >UniRef50_C5NY56 Ribosome small subunit-dependent GTPase A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY56_9BACL Length = 293 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 17/253 (6%) Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANID-QIVIVSAILPELSLNIIDRYLVACET 150 N G V + ER + L RP ANID I++VS PE S ++++ + E Sbjct: 52 NNTGYVVEILERKNELLRPK--------VANIDYSIIVVSVKDPEFSSKLLNKMICLNEN 103 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 ++ IIV K+DLL DE + + E M+ Y IGY+V +++ + ++ L++ ++ + Sbjct: 104 SNVDIIIVFTKLDLLSDEELNKMKEIMNYYYEIGYQVF---TNSDEDIEKLKQVISEKYV 160 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 +GQSG GKS+ +N L +I T +IS + G G+HTT Y + D+PG Sbjct: 161 AISGQSGAGKSTFINK-LAEHLDIETGEISKHLGRGRHTTRHTEFYQIDDFY-IADTPGF 218 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 + +E E + F EF+DY CK++ C H + C ++EAVE +I E+R+E+Y Sbjct: 219 SSLDITFIEKEDLQYLFREFNDY--DCKFKPCNHMEEIQCGVKEAVESKEILESRYEDY- 275 Query: 331 RILESMAQVKTRK 343 ++L + Q + RK Sbjct: 276 KVLFTEKQNQKRK 288 >UniRef50_B0SZL3 Ribosome small subunit-dependent GTPase A n=1 Tax=Caulobacter sp. K31 RepID=B0SZL3_CAUSK Length = 355 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 135/246 (54%), Gaps = 11/246 (4%) Query: 103 RTSVLTRP-DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNK 161 RT+ + R D ++ IAANID +V+++ +L+ I+RYL A P++VL K Sbjct: 89 RTAFVRRAADSVQTLQVIAANIDVAFVVTSMNADLNPRRIERYLAAAWQSGARPVVVLTK 148 Query: 162 IDLLDDEGMAFVNEQMD--IYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGV 218 DL +D Q D +G VL+VS+ GL L +T G + G SGV Sbjct: 149 SDLCEDP-----QTQADEIAALAVGCPVLVVSARQGVGLDALLAQVTPGETCVLIGSSGV 203 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKS+L+NA LG + + T I ++ G+HTT+ +L P GG ++D+PG+RE GL Sbjct: 204 GKSTLVNAFLG-EDRMATKAIRESDDQGRHTTSHRQLVLLPGGGLILDTPGIREVGLIDA 262 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 + E ++ F + C++ DC H ++PGCA+R A+E G + R+ ++ ++ +A Sbjct: 263 D-EGLSVVFDDIERLAESCRFSDCGHASEPGCAVRGALESGVLDPARWAHFQKLGAELAL 321 Query: 339 VKTRKN 344 V+ +++ Sbjct: 322 VEEKQD 327 >UniRef50_D2MQI0 Ribosome small subunit-dependent GTPase A n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI0_9FIRM Length = 289 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 125/223 (56%), Gaps = 16/223 (7%) Query: 116 VKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLL--DDEGMAF 172 V+P AN+DQ IV +++ P S +++DR + + I+PI+V+ K DL DD Sbjct: 66 VRPAIANVDQAFIVMSVVDPNFSTSLVDRLSILVKAAGIKPILVITKTDLKYPDD----- 120 Query: 173 VNEQMDIYRNIGYRVLMVSSHTQDGL--KPLEEALTGRISIFAGQSGVGKSSLLNALLGL 230 V +++ Y R M+ T+ G ++ +L G+I++ GQSG GKS+LLN L Sbjct: 121 VETEIEAYE----RGKMLVIRTEKGFINPAIQHSLEGKITVLTGQSGAGKSTLLNTL-DP 175 Query: 231 QKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEF 290 + T +IS G G+HTT + L+ GG V D+PG HLE + + +F Sbjct: 176 SFHLETQEISKALGRGKHTTRHSELHEIA-GGLVADTPGFSSLSFSHLELKDMADCIPDF 234 Query: 291 HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 YL C++ DC H+ +P C I++AV +G IA++R+++Y ++L Sbjct: 235 EPYLHQCRFNDCLHENEPDCTIKKAVLKGDIAKSRYQSYLQVL 277 >UniRef50_Q6ANG3 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ANG3_DESPS Length = 357 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 133/251 (52%), Gaps = 8/251 (3%) Query: 96 IVEAVHERTSVLTRPDF--YDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 + EAV +R S++TR G + +AANID + IV I E +L ++R L Sbjct: 86 LFEAVLKRKSLITRGSAGKTSGAQALAANIDTVFIVHPIAEEPNLRRMERELSVAWDSGA 145 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS-IF 212 P+++L K DL D +M +G ++ +V+S T + + L +TG ++ + Sbjct: 146 TPVVLLTKADLAADPDATL---EMVKSVAMGVKIALVNSKTAEAAELLRSYITGYLTAVL 202 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SG GKS+L+N+L G +++ T + + G G+HTT A L G +ID+PG+R Sbjct: 203 IGPSGAGKSTLVNSLAGTERQA-TGAVREGDGKGRHTTVARELIQISGHGIIIDTPGIRA 261 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 GL E I+Q F + + C++RDC H + GCA+ A E G+++ R +Y ++ Sbjct: 262 IGLTG-STEGISQVFPDIEELSHSCRFRDCSHTEETGCAVTAAAESGQLSLERLASYLKL 320 Query: 333 LESMAQVKTRK 343 ++ + + ++ Sbjct: 321 VQEVQEAAQKE 331 >UniRef50_Q65LI5 GTP-binding protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65LI5_BACLD Length = 350 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 80/264 (30%), Positives = 139/264 (52%), Gaps = 17/264 (6%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSA 131 GD V RP G KGI+ V R S +R + + AAN++ I +V+A Sbjct: 63 AVGDWVYMRP-----RGGEKKGIITEVVPRFSKFSRKAAGEPAEEQITAANVNTIFLVNA 117 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLM-- 189 + + ++ I+RYL+ P+IVL+K D+ D + E++ ++ + V + Sbjct: 118 LGLDFNVRRIERYLLLAWESGANPVIVLSKADIADR-----IEEKVRQAESVAFGVPIHV 172 Query: 190 VSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQH 248 +S+H G+ L+ + G G SGVGKS+++N L ++ + + + ++ G+H Sbjct: 173 ISAHEGSGMDELKAYVKQGETVALLGSSGVGKSTIINFFLKEDRQAVQS-VREDDDKGRH 231 Query: 249 TTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP 308 TTT ++ P GG +ID+PG+R LW E E Q F + C++ DC H T+P Sbjct: 232 TTTHREMFMLPEGGLLIDTPGMRALELWESE-EGFKQSFSDIDQLAQNCRFSDCLHQTEP 290 Query: 309 GCAIREAVEEGKIAETRFENYHRI 332 GC++REA+ +G++ RF++Y ++ Sbjct: 291 GCSVREALADGRLDAGRFQSYLKL 314 >UniRef50_Q8EZ61 Putative ribosome biogenesis GTPase rsgA n=3 Tax=Leptospira RepID=RSGA_LEPIN Length = 359 Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 160/301 (53%), Gaps = 22/301 (7%) Query: 42 GIVISRFGMHADVESADGD---VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 G V++ +G ++ + G+ + + + S+VTGD V+ R EG + IVE Sbjct: 31 GRVLAVYGEYSKIIIEQGEKKGIFSGALMASGESIVTGDWVLIR----EIEGDEL-CIVE 85 Query: 99 AVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPI 156 + R + L R P G + IA+NID ++++ + + S I+RYL + + Sbjct: 86 KILPRKTFLRRSNPGKRKGSQAIASNIDLLLVIMGLDNDYSPRRIERYLFLAKVSGAQVT 145 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYR-VLMVSSHTQDGLKPLEEAL-TGRISIFAG 214 IVLNK DL D F M+I G + M+S+ + + + + G+ F G Sbjct: 146 IVLNKKDLCMDPENKF----MEIKTIAGETPIEMISALDLKQTRTILQWIDPGKTITFLG 201 Query: 215 QSGVGKSSLLNALLG--LQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 SG GKS+++N+LLG +QK TN++ + G G+HTTT L+ P GG ++D+PG+RE Sbjct: 202 SSGAGKSTIINSLLGGEIQK---TNEVKVSDGTGKHTTTRRELFLLPSGGVLMDNPGIRE 258 Query: 273 FGLWHLEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 GL+ E ++ + F E C++ DC H+ +P C + AV++G+I+E R+ +Y + Sbjct: 259 VGLFSEGSEDELEEVFPEIAVAAEECRFNDCSHNEEPNCGVVAAVKDGRISEARYFSYLK 318 Query: 332 I 332 + Sbjct: 319 L 319 >UniRef50_Q7MGA2 Putative ribosome biogenesis GTPase rsgA 2 n=38 Tax=Proteobacteria RepID=RSGA2_VIBVY Length = 353 Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 121/238 (50%), Gaps = 6/238 (2%) Query: 102 ERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 ER S L+R + + IA N+D + IV ++ + +L+ I+RYL + IEP++VL Sbjct: 86 ERQSELSRKAAGSKIAEQLIATNVDTLFIVCSLNDDFNLSRIERYLSIAKEAHIEPVVVL 145 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 K DL Q V + + L+P GR F G SGVG Sbjct: 146 TKADLSPQAEQNITQVQQLSATLWVEAVNALDPASVSALQPW--CTKGRTVAFIGSSGVG 203 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KS+L N LLG + + T I ++ G+HTTTA ++ P G +ID+PG+RE L Sbjct: 204 KSTLTNTLLGEETQ-QTGGIREDDSKGRHTTTARSVHMIPDGALIIDTPGMRELQLADCS 262 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 E +++ F E C+++DC+H +PGCA+++A+ G + R +NY ++ A Sbjct: 263 -EGVSETFAEIETLAQHCRFKDCQHQQEPGCAVQQAINNGTLEARRLQNYFKLQREQA 319 >UniRef50_C1CZT1 Putative GTPase engC protein 2 n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZT1_DEIDV Length = 330 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 115/215 (53%), Gaps = 11/215 (5%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 IAAN+D + IV+ + L + RY+ A + EP+++LNK DL+ D A+ EQ+ Sbjct: 111 IAANVDVVFIVTTPDQDFDLPRLGRYVAAVQVSGAEPVVLLNKSDLVQD--AAWYLEQV- 167 Query: 179 IYRNIG--YRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEIL 235 R +G +S+ GL ++ T GR G SGVGKS+L N LLG Q+ Sbjct: 168 --RRLGPDLPAHQISAAQHGGLDSIQPYFTPGRTVALIGSSGVGKSTLTNRLLG-QEVAA 224 Query: 236 TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG 295 T + + G+HTTT LY P GG +ID+PG+R+ +W + + F + Sbjct: 225 TGSVRETDQQGRHTTTGRTLYRVPGGGLLIDNPGLRDIAVWDADSRSVN--FEVIEELAT 282 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 C++R C H T+PGCA++ AV++G++ YH Sbjct: 283 KCRFRKCTHMTEPGCAVQRAVQKGQLDAQVLAAYH 317 >UniRef50_C8WGD6 GTPase EngC n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGD6_EGGLE Length = 356 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/256 (31%), Positives = 131/256 (51%), Gaps = 11/256 (4%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 + ++ V RTS R ++ +AANID + +++ + +L ++RYL Sbjct: 86 RAVIAQVLPRTSAFVRKAAGAALEQQVVAANIDVAFLCMSLVGDFNLRRLERYLTLAWES 145 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRIS 210 P++VL K D D Q + G VL VSS + G + + L GR + Sbjct: 146 GAVPVVVLTKADACDSLERRLAAVQSVAF---GVDVLAVSSMGECGCEAVRPYLRPGRTA 202 Query: 211 IFAGQSGVGKSSLLNALLGLQKEIL-TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 G SGVGKS+L+N LLG +E+L T D+ + G G+H TT +L P GG V+D+PG Sbjct: 203 ALLGSSGVGKSTLVNRLLG--EEVLETRDVRAD-GRGRHATTRRQLVLLPGGGLVMDTPG 259 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +RE GL QGF + C++ +C H ++PGCA+ EA+ + +++E R++ Y Sbjct: 260 MRELGLGE-AAGGFEQGFADVERLFASCRFSNCTHTSEPGCAVYEAIADRELSERRWQAY 318 Query: 330 HRILESMAQVKTRKNF 345 ++ A + R + Sbjct: 319 RKLRAEAAFAEDRAGY 334 >UniRef50_UPI0001789FEF GTPase EngC n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789FEF Length = 357 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 6/212 (2%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +A N D + I+S++ + ++ I RYL +P+I+L K DL D + Sbjct: 109 VATNFDYVFILSSLNWDFNVTRIMRYLTQARQSGGQPVIILTKADLAPDYNLLLAEVTQS 168 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 I V + SHT G+ L+ L G+ +F G SGVGKSSLLNAL+ Q + Sbjct: 169 I---PDVPVHAICSHTGLGMNELDPYLMPGKTVVFLGMSGVGKSSLLNALIE-QDVMKVQ 224 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 I + G+HTTT +L+ P G VID+PG+RE G++ + E I F + + C Sbjct: 225 AIREVDSRGRHTTTHRQLFMLPSGTMVIDTPGMRELGIFDAD-EGIRASFTDVEAWFPQC 283 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 ++ DC+H +PGCA+ A+ +G + R+E+Y Sbjct: 284 RFTDCRHQAEPGCAVLAALADGSLPRERWEHY 315 >UniRef50_A9EN60 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EN60_SORC5 Length = 370 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/261 (32%), Positives = 133/261 (50%), Gaps = 13/261 (4%) Query: 75 TGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAI 132 GD V RPG +G IV R++ L R V+ +AANID++ IV+++ Sbjct: 84 VGDWVGLRPG----DGAGPSYIVH-TFARSTCLRRKAAGPTVEAQVLAANIDKVFIVTSL 138 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS 192 + +L ++RY+ A P++VLNK D+ D +++ D+ + +VS+ Sbjct: 139 NADFNLRRLERYIDAVLDSGARPVLVLNKADVCPDPAR-YIDAARDVA--PAAPIALVSA 195 Query: 193 HTQDGLKPLE-EALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTT 251 + GL L E G G SGVGKS+L N LLG + + L I + G+HTT Sbjct: 196 LSGAGLDALRAEIGAGETIALVGSSGVGKSALSNRLLGAEVQ-LEGAIRASDERGRHTTA 254 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 L+ P GG +ID+PG+RE G+W GF + + C++RDC HD +PGCA Sbjct: 255 HRELFLIPGGGLLIDTPGIRELGVWSAG-GSAPAGFDDVEAHAAACRFRDCAHDGEPGCA 313 Query: 312 IREAVEEGKIAETRFENYHRI 332 + A+++G + R Y ++ Sbjct: 314 VLRAIKDGDLDPERLGAYLKL 334 >UniRef50_B6W6J9 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W6J9_9FIRM Length = 287 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 136/247 (55%), Gaps = 18/247 (7%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQ 152 KG + + +R + + RP+ ANIDQI+ I P L+L ID+Y+ CE + Sbjct: 52 KGYITKILDRKNQIKRPNI--------ANIDQILYFITIKNPSLNLFNIDKYISMCEYIN 103 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 ++ II+++K DL D + + F+ +Y IGY+++ + ++ + E L G+ S Sbjct: 104 VDVIIIVSKKDLADKKDLDFIK----MYEKIGYKLIFIDNYKDFPESEILEILRGKTSAV 159 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 +G SGVGKS+ L+ L+ +K+I IS+ S G++TT +++ ++ D+PG Sbjct: 160 SGSSGVGKSTFLSNLV--EKDIEIGSISEKSKRGKNTTRHVEIFNLEKNTNIFDTPGFDS 217 Query: 273 FGLWHLEPEQ-ITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 F + ++ E+ + F EF + CK++DC H +P C +++ + + I +TR+ENY Sbjct: 218 FDIDFIDDEKDLKYCFREFDN--NSCKFKDCNHINEPKCKVKDDLSKNIIEKTRYENYLT 275 Query: 332 ILESMAQ 338 + E + + Sbjct: 276 LFEEIKK 282 >UniRef50_Q6KH84 Predicted GTPase protein n=1 Tax=Mycoplasma mobile RepID=Q6KH84_MYCMO Length = 219 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 124/219 (56%), Gaps = 10/219 (4%) Query: 116 VKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 +P +N+DQI++V ++ P+ + +D+ L+ E I+P+I+ K DLL + Sbjct: 2 TRPKVSNLDQIILVVSLKEPDFNSYTLDKLLLIVEFKNIQPVIIFTKSDLLSESSKI--- 58 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 ++Y GY+V + S + ++ + + + ++S FAG SGVGK++++N L E Sbjct: 59 --PNLYEKQGYKVFLTSINDKNSYEKISQIFENKLSAFAGWSGVGKTTIINHLTNNNYE- 115 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T IS G G+HTT ++ F G +ID+PG F +L+ E++++ F +F + Sbjct: 116 -TQQISKFLGRGKHTTRITQIIPFNKGW-LIDTPGFSIFE-HNLKKEEVSKAFFDFRIFA 172 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 C++R+C H+ + C +++ V + I ++R++NY RIL Sbjct: 173 NECEFRNCFHNKEKKCKVKDEVSKNNILQSRYDNYLRIL 211 >UniRef50_A6GEY2 Probable GTPase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GEY2_9DELT Length = 374 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 25/270 (9%) Query: 96 IVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 +V + ER + LTR + +AAN+D++++ S++ + L ++R+L Sbjct: 82 VVRKLLERATSLTRRAAGSSGRAQVLAANLDRVLVCSSLDRDFKLTRLERWLSLVHEGGA 141 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNI--GYRVLMVSSHTQDGLKPLEEALTGRIS- 210 EP++VL K L+D+ A +++ R + G V+ V T GL L+ + + Sbjct: 142 EPVVVLTKAGLVDEATRA---RRVEAAREVALGVSVIAVDRFTGVGLDALDACVLRAVEE 198 Query: 211 ---------IFAGQSGVGKSSLLN---ALLGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 G SGVGKS+LLN L G + + T IS G G+HTT+ L Sbjct: 199 DASSWAPTLALVGSSGVGKSTLLNYLCELAGGEGAMATGSISSAHGKGRHTTSHRELVAL 258 Query: 259 PHGGDV----IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIRE 314 P + ID+PG+RE GLW E E + + F E C++ DC+H +PGCA+R Sbjct: 259 PERDGLRALLIDTPGLREVGLWG-EGEGVDKTFAEIGALARGCRFGDCQHAGEPGCAVRA 317 Query: 315 AVEEGKIAETRFENYHRILESMAQVKTRKN 344 AV+EG++ R E Y R+++ R N Sbjct: 318 AVDEGRLEGRRLEAYRRLVDERETTARRAN 347 >UniRef50_A8RUS7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RUS7_9CLOT Length = 359 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 134/253 (52%), Gaps = 24/253 (9%) Query: 91 VNVKGIVEAVHERTSVLTRPDFY--------DGVKPIAANIDQIVIVSAILPELSLNIID 142 V V+ ++H+ VLTR + + + +AANID + + ++ +LN ++ Sbjct: 77 VTVEKEFASIHQ---VLTRKSLFLRKAVGVSNQSQTVAANIDTVFLCMSLNKNFNLNRME 133 Query: 143 RYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG-YRVLMVSSHTQDGL--K 199 RYL P+IVL K DL +D ++E++ +I + ++V+S +D + K Sbjct: 134 RYLSIAWDSGATPVIVLTKSDLCED-----LSERISQIESISCFSDIIVTSMFEDDISAK 188 Query: 200 PLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L + F G SGVGKS+L+N LLG+ I T +I+ G+HTTT ++ P Sbjct: 189 FLSYFSKNQTCAFIGSSGVGKSTLINRLLGVNT-IATQEIAKGDK-GRHTTTGREMFLCP 246 Query: 260 HGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEG 319 GG VID+PG+RE G + +++ F E CK+R+C H +PGCA+ A+E G Sbjct: 247 LGGVVIDTPGMREMGA---DSTDLSKTFSELESLAYQCKFRNCTHTNEPGCAVLAAIERG 303 Query: 320 KIAETRFENYHRI 332 ++ R ENY ++ Sbjct: 304 ELDIRRLENYRKL 316 >UniRef50_C7H5I2 Ribosome small subunit-dependent GTPase A n=8 Tax=Bacteria RepID=C7H5I2_9FIRM Length = 303 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 148/308 (48%), Gaps = 32/308 (10%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 +G ++ G V++ +G V C R R + V GD V E N + Sbjct: 13 KGYIVKGIGGFYYVKTEEG-VIECKPRGIFRKQKITPVAGDEVTL-------ETENGAAV 64 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEP 155 + + R +V RP P+A N+D + +V S P S ++D+ ++P Sbjct: 65 IAEIAPRKNVFVRP-------PVA-NLDVLFLVASTTQPTPSTLVLDKLSAIAVDKGVQP 116 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +IV K DL + E + E+ + + + + +GL + + ++GR+ F G Sbjct: 117 VIVCTKADLGEVEFLRSAYERSTL------PFIAIRYDSGEGLDEVRQWISGRLCAFCGN 170 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKS+LLN LL Q E T+ IS G G+HTT ++ GG + D+PG Sbjct: 171 SGVGKSTLLNTLLP-QAERETSAISQKLGRGRHTTREVTIFE-AFGGRIADTPGFASLEA 228 Query: 276 ---WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + E + F EF YLG C++ C H T+ GCAIR A+ EGK+++TR+++Y + Sbjct: 229 NRAGFIPKENLEHAFPEFGPYLGQCQFTGCSHRTEKGCAIRAALAEGKLSQTRYDSYCAM 288 Query: 333 LESMAQVK 340 E + VK Sbjct: 289 YEEVKDVK 296 >UniRef50_C6XMF8 GTPase EngC n=16 Tax=Alphaproteobacteria RepID=C6XMF8_HIRBI Length = 358 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/275 (29%), Positives = 150/275 (54%), Gaps = 20/275 (7%) Query: 76 GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPE 135 GD +++ P P + V + ++V +R + T D ++ IAAN+D IVS+ + Sbjct: 79 GDWLLYNPKLPNSSKVLER---KSVFQRRAAGTAWD----LQLIAANVDTAFIVSSCNQD 131 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 195 ++ ++RY+ ++ P+I+L KIDL +D ++ + I + V+ + + + Sbjct: 132 FNIARLERYIALALEAEVTPVIILTKIDLCED-ATPYIEQAQSISDLVT--VVTLDARGE 188 Query: 196 DGLKPLEEALTGRIS-IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAAR 254 + + L + R + +F G SGVGKS+L NAL G + +I T + ++ G+HTTT + Sbjct: 189 EPQQKLAQWCRPRQTLVFLGSSGVGKSTLTNALAG-KSDIATQAVREDDDKGRHTTTTRQ 247 Query: 255 LYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIRE 314 L+ P G ++D+PG+RE L ++ F ++ + C++RDCKH+T+PGCAI+ Sbjct: 248 LHMSPQGFTILDTPGMREIQLTD-AAAGVSDLFSDYQEIAHQCRFRDCKHETEPGCAIQA 306 Query: 315 AVEEGKIAETRFENYHRIL-------ESMAQVKTR 342 A+E +I R + +++ ++AQ K++ Sbjct: 307 ALETEEIDSVRVARWKKLVAEEQFNSSTLAQRKSK 341 >UniRef50_Q7NDG7 Glr4268 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NDG7_GLOVI Length = 343 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 129/257 (50%), Gaps = 23/257 (8%) Query: 62 HRCNIRRTIRSLVTGDRVVWRPGKPAAE--GVNVKGIVEAVHERTSVLTRPDFYDGVKPI 119 R +++T +S++ GDRV AE + +G++ A R SVL++P PI Sbjct: 30 RRARLKKTGQSVLVGDRV------EVAEIDSASGRGVIAATCARRSVLSKP-------PI 76 Query: 120 AANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 A +V+ + P ++ R+LV E + I+ LNKID + E + V + Sbjct: 77 ANCTGVLVVFALSEPAYDPALLSRFLVHIEAEDLGVIVCLNKIDEVPPEAVDGVAAAVGG 136 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL-LGLQKEILTND 238 + GY V VS+ T GL L L G + AG SG GKSSLLN L GL + D Sbjct: 137 W---GYTVRPVSARTGAGLAALRAELAG-TYVLAGPSGAGKSSLLNHLHPGLALRV--GD 190 Query: 239 ISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCK 298 IS G G+HTT L+ V D+PG + L L PE + F EF YLG C+ Sbjct: 191 ISARLGRGRHTTRHVELFALNAEALVADAPGFNQLEL-TLAPELLAGYFPEFRPYLGRCQ 249 Query: 299 YRDCKHDTDPGCAIREA 315 +R+C H +PGCA+REA Sbjct: 250 FRNCLHRDEPGCAVREA 266 >UniRef50_A6WF06 GTPase EngC n=8 Tax=Actinomycetales RepID=A6WF06_KINRD Length = 357 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 12/272 (4%) Query: 75 TGDRVVWRPGKPAAEGVNVKGIV--EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI 132 TGD V R P +G V G+V V R SV R + +AAN+D +V+ Sbjct: 73 TGDWVGLRLDDP--DGPRVVGVVARRTVLARASVTGRSTEHQ----LAANVDTVVVAVGA 126 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS 192 +L ++R+L +P++ L K DLLD++G+ V ++ +G V+ VS+ Sbjct: 127 DSRTTLGRVERFLALAWNSGAQPVVALTKSDLLDEDGLEDVLARVR-GDAVGVAVVPVSA 185 Query: 193 HTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTA 252 G+ L L G + + G SG GKS+L NALLG Q + G G+HTT Sbjct: 186 TGPRGVGELRNHLRGTV-VLIGSSGAGKSTLANALLG-QDRFAVGAVRSADGKGRHTTVT 243 Query: 253 ARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAI 312 L P G ++D+PG+R G+ L E + + F + D C++ DC H +PGCA+ Sbjct: 244 RELVPVPGGLVLVDTPGLRSLGVSELG-EGLERTFADVEDVAVDCRFSDCSHTAEPGCAV 302 Query: 313 REAVEEGKIAETRFENYHRILESMAQVKTRKN 344 A++ G ++ R ++Y R+ A +R + Sbjct: 303 LAAIDAGVMSARRLDSYRRLEREQAWFASRTD 334 >UniRef50_Q3A0G9 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RSGA_PELCD Length = 364 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/252 (34%), Positives = 124/252 (49%), Gaps = 14/252 (5%) Query: 86 PAAEGVNVKGIV--EAVHERTSVLTRPDFYDGVKP-----IAANIDQIVIVSAILPELSL 138 P G+ + I+ + +R +V R + KP +AAN+D +IV + + + Sbjct: 75 PQEGGIRIHAILPRQTALKRATVSNRKGLVE--KPGVPQVLAANVDIAIIVCGLNRDYNP 132 Query: 139 NIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGL 198 I+RYL P+IVLNK D+ E A E I G VL+ S+ DGL Sbjct: 133 RRIERYLTLVHESGAMPLIVLNKSDICP-ETQARRAEIESIA--FGTPVLVTSAQCGDGL 189 Query: 199 KPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 L L G + G SG GKS+LLN L + + T++IS G G HTTT L+ Sbjct: 190 DELASHLKAGSTLVLIGSSGAGKSTLLNRLACAEHQ-QTSEISAAVGKGMHTTTHRELFP 248 Query: 258 FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVE 317 P G VID+PG+RE LW + F E + C++ DC+HD +P C IR+A+ Sbjct: 249 LPGGALVIDTPGLRELHLWGESEAGLASTFPEVIGFAAQCRFSDCQHDQEPDCGIRQALH 308 Query: 318 EGKIAETRFENY 329 +G + R E+Y Sbjct: 309 DGTLDPARLESY 320 >UniRef50_A4ASQ1 Ribosome-associated GTPase n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ASQ1_9FLAO Length = 354 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 149/269 (55%), Gaps = 31/269 (11%) Query: 94 KGIVEAVHERTSVLTRPDF--YDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 K ++ A+ R S++ R + IAANID +IV ++ + ++N I+RYL C Sbjct: 80 KALIHALLPRKSIIERKAVGKLGQTQIIAANIDFGLIVQSVNRDFNINRIERYLTICNAS 139 Query: 152 QIEPIIVLNKIDLLDD----EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-T 206 +IEP+IVL+K+DL+++ E + +NE+++ + +S+ TQ G+ L+ L T Sbjct: 140 KIEPLIVLSKVDLIEEQKLKELLIQINERIE-----DVPLFAISNQTQIGITELKSELKT 194 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEIL-TNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 GR G SGVGKS+L+N L G K+++ T +IS++ G+H T+ L + G +I Sbjct: 195 GRTYCLLGSSGVGKSTLINTLTG--KDLMETGEISESIDRGKHVTSHRELIVLEN-GILI 251 Query: 266 DSPGVREFGLWHLEPEQITQGF-VEFHDYLGL---CKYRDCKHDTDPGCAIREAVEEGKI 321 D+PG+RE G+ + + G + F L L CK+ DC H + GCA+ +A+E G + Sbjct: 252 DNPGIREVGITNS-----SSGLEITFESILNLAQNCKFSDCTHINEKGCAVIDAIENGDL 306 Query: 322 AETRFENYHRI------LESMAQVKTRKN 344 + NY ++ ES AQ + +K+ Sbjct: 307 DADAYANYIKMEKEKSHFESDAQERKKKD 335 >UniRef50_C6W757 Ribosome small subunit-dependent GTPase A n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W757_DYAFD Length = 354 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 143/259 (55%), Gaps = 24/259 (9%) Query: 94 KGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 +GI+ +V R + L+R P + IA NID IV + + + + RY+V Sbjct: 79 EGIIISVLPRANELSRKMPGRTTEKQVIATNIDTAFIVQGLDRDFNPMRLQRYIVQIMQC 138 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR--VLMVSSHTQDGLKPL--EEALTG 207 I P+++LNK DL+ D + +Q+ +GY VL++S+ ++GL+ E+ L G Sbjct: 139 NIRPVVLLNKQDLVADP--EYYRQQVTA---LGYECPVLLLSATGREGLQQWANEQLLPG 193 Query: 208 RISIFAGQSGVGKSSLLNALLG--LQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 + + G SGVGKS+L+NALLG LQ+E +SD + G+HTT + L P G +I Sbjct: 194 QTYVLIGSSGVGKSTLVNALLGYRLQEE---GSVSDFNHKGRHTTVSRNLVMLPSGAMLI 250 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGL----CKYRDCKHDTDPGCAIREAVEEGKI 321 DSPG+REFG+ L+ + QG + +H L C++ DC H +PGCAI AV+ G++ Sbjct: 251 DSPGMREFGV-TLDADD--QG-MHYHPLLAALAADCRFHDCTHLHEPGCAITAAVQSGEL 306 Query: 322 AETRFENYHRILESMAQVK 340 +++Y +I A + Sbjct: 307 PREVYDSYLKISREQAHYQ 325 >UniRef50_A6W235 GTPase EngC n=2 Tax=cellular organisms RepID=A6W235_MARMS Length = 382 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 150/294 (51%), Gaps = 39/294 (13%) Query: 81 WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNI 140 W +P E + ++EA ++ + R + IAAN+D + IV++ + +L Sbjct: 77 WVIAEPVHEHFRITEVLEAKNQLERLSNRKR-----QLIAANLDYLFIVTSANSDFNLKR 131 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG-YRVLMVSSHTQDGLK 199 ++RYL IEP+IVLNKIDL D V++ +D R + + ++ +S + L Sbjct: 132 LERYLAMAYESNIEPVIVLNKIDLTDK-----VDDYLDQIRGLKVHNLVSISMLEPNSLL 186 Query: 200 PLEEALTGRISI-FAGQSGVGKSSLLNALLGLQKEILTN-----DISDN----SGL---- 245 L L +I G SGVGKSSL+NAL E+ T+ +++DN G+ Sbjct: 187 SLNHYLKAGTTIAMVGSSGVGKSSLINALFNHVVELATSVLNSVEVTDNMQATGGIREDD 246 Query: 246 --GQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 G+HTTT+ +L G ID+PG+RE L + + E I Q F + CK+ +C Sbjct: 247 DKGKHTTTSRQLLINQQGVLFIDTPGIRELQLLNAQ-EGIEQTFNDIVHLARQCKFTNCA 305 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILE-----------SMAQVKTRKNFS 346 H T+PGC I +A+E G++ + ++NY ++L+ + AQ + K+FS Sbjct: 306 HQTEPGCQILQALENGELPLSHWDNYQKLLKEDAFNARSAQGAYAQKQYMKSFS 359 >UniRef50_C6BWU3 GTPase EngC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWU3_DESAD Length = 345 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 8/238 (3%) Query: 100 VHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPII 157 V ERTS+L R P ++PIAANID + IVS+ E +LN I+RY+ + ++ Sbjct: 84 VLERTSLLQRMAPGQEVKLQPIAANIDTLFIVSSCNTEFNLNRIERYICLALEAGVNFVL 143 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQS 216 VL K DL +E + + ++ ++ ++ ++ ++ L++ G G S Sbjct: 144 VLTKEDL-TEEAQEYRKQAEHLFESMP--IVTINGKDPQSVQSLQKWFKPGETVALLGSS 200 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGK++LLN + G +KE T I G+HTTT L+ P G +ID PG+RE L Sbjct: 201 GVGKTTLLNTINGTEKE-KTGAIRHGDDKGRHTTTTRSLHVMPSGALLIDVPGIRELQL- 258 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 H I + F E + +C++ DC H+ +PGC +REA+E I R +NY ++ E Sbjct: 259 HDCHAGIDRAFSEIVEAEEMCRFSDCSHEREPGCGVREALESKIITRRRLDNYLKLKE 316 >UniRef50_Q1WUA8 GTPase n=2 Tax=Lactobacillus salivarius RepID=Q1WUA8_LACS1 Length = 296 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%) Query: 63 RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAAN 122 R N R+ + V GD V ++ N G + ++ R + L RP PIA N Sbjct: 29 RGNFRKKKMTPVVGDWVDFKIDD------NGDGYILKIYPRKNQLVRP-------PIA-N 74 Query: 123 IDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY- 180 ID ++VSA + P+ S N++DR LV E+ + P++ +K DLL+ E + Y Sbjct: 75 IDTAIVVSACVEPDFSPNLLDRQLVMLESNNVRPVLFFSKADLLNQEQREKFESYFNYYS 134 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL---LGLQKEILTN 237 + + + + Q+ L L LT I + GQ+G GKS+LLN L L L+ T Sbjct: 135 KYYSCYISFENENRQNVLNNLMCDLTNEIVVVMGQTGAGKSTLLNDLKPDLNLE----TG 190 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 IS G+HTT L +G + D+PG F L ++ + + + +F Y C Sbjct: 191 KISKALSRGKHTTRKVTLLDI-NGVMIADTPGFSSFELLNITKDTLPLMYPDFVKYQDNC 249 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 K+R C H +P CA+++AV +G+I E R+ NY + + +A K R Sbjct: 250 KFRGCLHLKEPKCAVKDAVNKGEILENRYINYVQFQDMLANKKVR 294 >UniRef50_Q03RY0 Predicted GTPase n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RY0_LACBA Length = 354 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 9/219 (4%) Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD-EGMAFVN 174 V+ +AAN+D +I ++ + + + ++RYL C P++VL K DL D E V Sbjct: 106 VQSVAANVDVALICMSLNHDFNPHRLERYLTVCWDSGATPVVVLTKSDLCSDTEAKLAVI 165 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKE 233 M + + + +GL PL+ L G+ G S VGKS L+N LLG K Sbjct: 166 APMTLGVTVLTTTTTTA----NGLAPLQTFLQAGQTFALLGSSDVGKSILINRLLG--KT 219 Query: 234 ILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDY 293 I+T D N G HTTT+ LY G +ID+PG+R GLW + + Q F + D Sbjct: 220 IITTDGLRNDDKGHHTTTSRELYQLSSGALMIDTPGMRALGLWGADTG-LAQNFSDVADL 278 Query: 294 LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + C++R+C H T+PGCA++ A+ G++ R ++Y ++ Sbjct: 279 IRHCRFRNCHHQTEPGCAVKAALATGQLTTERGQSYQKL 317 >UniRef50_A8MGJ8 GTPase EngC n=6 Tax=Bacteria RepID=A8MGJ8_ALKOO Length = 360 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 139/250 (55%), Gaps = 21/250 (8%) Query: 106 VLTRPDFYD----GVKP----IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPII 157 +LTR ++ G+K IA N+D + I ++ + ++ ++RY+ P++ Sbjct: 90 ILTRKSCFERKIAGLKSDSQIIATNVDTVFICMSLNNDFNIRRLERYIAVAWESMATPVV 149 Query: 158 VLNKIDLLDDEGMAFVNEQMDI-YRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQ 215 VL K DL +D + ++I +G VL+ SS ++G +++ + GR F G Sbjct: 150 VLTKSDLCED----IQQKLLEIGTVAMGVDVLVTSSILEEGYSSIQKYIENGRTVAFIGS 205 Query: 216 SGVGKSSLLNALLGLQKEIL-TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGKS+L+N L+G +E+L TN I D+ G+HTTT +L+ P+ G +ID+PG+RE G Sbjct: 206 SGVGKSTLINKLIG--EEVLKTNGIRDDHK-GKHTTTHRQLFVVPNLGVIIDTPGMRELG 262 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 + + E+ F + CK+ DCKH+ +P CA+REA+E+G + R ++Y ++ Sbjct: 263 IVSADLER---SFDDIEKIAKDCKFTDCKHEGEPHCAVREAIEKGDLDIERLKSYKKLQR 319 Query: 335 SMAQVKTRKN 344 + + R N Sbjct: 320 ELKYNELRAN 329 >UniRef50_B8DLQ8 GTPase EngC n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLQ8_DESVM Length = 371 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 90/278 (32%), Positives = 136/278 (48%), Gaps = 32/278 (11%) Query: 95 GIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 GI+ V R +VL R DG V+ IAANID IV + + + ++RYLV Sbjct: 81 GIIHRVFPRRTVLRRKTAGDGCGVQMIAANIDTAFIVQSCHYDFNPGRLERYLVMLADGG 140 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISI 211 +EP++VL K DL+ + ++ + + RV+ +SS T GL L +AL GR Sbjct: 141 VEPVVVLTKTDLVTPDDLSRLLAVVAAVTPA--RVIALSSVTGAGLDVLRQALAPGRTHC 198 Query: 212 FAGQSGVGKSSLLNALLGLQK--------------------EILTNDISDNSGLGQHTTT 251 G SGVGK++LLN L Q + T +S +G G HTTT Sbjct: 199 LLGSSGVGKTTLLNQLTSGQAGAGVLDGQALATRADQATRADRATRAVS-ATGEGTHTTT 257 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 +L G V+D+PG+RE G + + GF + G C+Y DC+H+ + GCA Sbjct: 258 RRQLTMLDGGALVVDTPGMREVGTV-AAADGVDAGFADIALLAGECRYADCRHEHEAGCA 316 Query: 312 IREAVEEGKIAETRFENYHRI-----LESMAQVKTRKN 344 +R AV+ G++A + NY ++ M+Q+ R+ Sbjct: 317 VRAAVDSGELAAAHYHNYLKLRKEAAFNEMSQLDRRRK 354 >UniRef50_A5IY02 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Mycoplasma RepID=RSGA_MYCAP Length = 281 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 124/224 (55%), Gaps = 13/224 (5%) Query: 116 VKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 ++P ANID I+IV +I PE ++D+Y+ E+ IEP++ K DL + + N Sbjct: 63 IRPKVANIDHIIIVMSIHEPEFQSFLVDKYMAFIESANIEPVLFNTKADLGTSK---YKN 119 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 E Y ++GY+V +S T + +K + + T + ++ GQSGVGK++L+N + G Sbjct: 120 E----YESLGYKVYEISYKTDEWVKNIAKLFTNKTNVLMGQSGVGKTTLVNKITG--SNF 173 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 IS + G+HTT ++ + G++ID+PG + +L +Q+ + +F + Sbjct: 174 AVQAISKFANRGKHTTRIVQIVNVFDNGELIDTPGFSSLDI-NLTKQQLAYSYKQFKELG 232 Query: 295 GLCKYRDCKHDTDP--GCAIREAVEEGKIAETRFENYHRILESM 336 CK++ C H +P C I++AV++ I + R+ NY ++L+ + Sbjct: 233 KFCKFKTCFHQNEPENFCNIKQAVKDNIIPQFRYNNYLKLLQEV 276 >UniRef50_B4UM25 Ribosome small subunit-dependent GTPase A n=4 Tax=Anaeromyxobacter RepID=B4UM25_ANASK Length = 350 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 17/262 (6%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSA 131 V GD V+ PG+P ++ V ER S L+R + +AAN+D +++V Sbjct: 63 VAGDFVLAAPGEPP--------VIARVLERRSALSRNAAGRATVEQVLAANVDVVLVVQG 114 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS 191 + ++R L A EP +VL K DL+ D G A + VL+ S Sbjct: 115 LDEGAHPRRLERTLAAVHASGAEPAVVLTKADLVPDLGEALAEARSAAAGAP---VLVAS 171 Query: 192 SHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTT 250 + +GL L + GR ++F G SG GKS+L+NALLG + E + G+HTT Sbjct: 172 GLSGEGLDALAGLVGPGRTAVFVGPSGAGKSTLVNALLG-RAEQPVGAVRARDARGRHTT 230 Query: 251 TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGC 310 TA RL+ P GG VID PG+RE LW + + F + C++RDC H +PGC Sbjct: 231 TARRLFEIPGGGSVIDGPGIRELRLW--DAGGLAAAFDDVAALAAGCRFRDCSHAGEPGC 288 Query: 311 AIREAVEEGKIAETRFENYHRI 332 A+ AVE G + R E+ ++ Sbjct: 289 AVAAAVEAGGLDAGRLESLRKL 310 >UniRef50_A4S3D3 Predicted protein n=3 Tax=Mamiellales RepID=A4S3D3_OSTLU Length = 352 Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 33/290 (11%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ + ++ GD VV + V +G+++ V R S L P PIA Sbjct: 14 VARALLKKIKKRVLVGDEVVL----SGVDWVQSRGMIDDVVGRRSELVEP-------PIA 62 Query: 121 ANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 N+DQ ++V A+ P L + + R+LV+ E ++ +VLNK +LL + +A +++ Sbjct: 63 -NVDQALLVFALEQPPLEVKQLTRFLVSMEATKVPFTLVLNKCELLSEVEVADWRARLES 121 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLN------ALLGLQKE 233 + GY ++S T G++ LEEAL G+ ++ AG SGVGKSSL+N AL LQ Sbjct: 122 W---GYDAKVISVATGQGVEELEEALRGKTTVLAGPSGVGKSSLINRFRFGSALADLQS- 177 Query: 234 ILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDY 293 + SG G+HTT L GG + D+PG L + +++ F E D Sbjct: 178 --VKGVGTRSGRGKHTTRHVSLLRLDVGGFLADTPGFGYPSLEGFDTDKLAMCFPEIRDA 235 Query: 294 L----GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 L C++ DC H +PGC + + E E R++ Y+ + E + Q+ Sbjct: 236 LASSDARCQFSDCTHRHEPGCVVVDECWE----ERRYDLYYDLFEEVKQI 281 >UniRef50_Q71ZZ0 Putative ribosome biogenesis GTPase rsgA 2 n=21 Tax=Listeria RepID=RSGA2_LISMF Length = 346 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 131/248 (52%), Gaps = 9/248 (3%) Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIV 158 +V ER +V +R + + IAAN D +IV ++ + +LN ++RYL PII+ Sbjct: 77 SVLERKTVFSRMNKDSEEQLIAANFDYALIVMSLNHDFNLNRLERYLTVAWDSGATPIII 136 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNI-GYRVLMVSSHTQDGLKPLEEALTGRIS-IFAGQS 216 L K DL++D AF + + + Y V +S H G + LE L + + G S Sbjct: 137 LTKADLVEDL-TAFAQQLETVAYGVPAYYVDNLSHH---GFEALERDLKPNSTLVLLGSS 192 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKSS +N+L G + T I ++ G+HTTT ++ +G VID+PG+REFG+ Sbjct: 193 GVGKSSFINSLAGTDL-MKTAGIREDDSKGKHTTTHREMHLLTNGWIVIDTPGMREFGV- 250 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + F + + C++ DC H +PGCA++ A+E+G + +EN+ ++ M Sbjct: 251 GFNQAGLETTFSDVEELAEGCRFHDCSHTQEPGCAVKAALEDGTLTMQHYENWLKLQREM 310 Query: 337 AQVKTRKN 344 A RKN Sbjct: 311 A-YHARKN 317 >UniRef50_C7NDT0 Ribosome small subunit-dependent GTPase A n=2 Tax=Leptotrichia RepID=C7NDT0_LEPBD Length = 275 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 81/281 (28%), Positives = 149/281 (53%), Gaps = 18/281 (6%) Query: 60 DVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPI 119 +++ C +R T++ V D++ G E + ++E + +R + L RP + Sbjct: 5 NIYECKLRGTLK--VKNDKMNCIIGD-IVEFDEKEKVIEKIEKRKNFLYRP--------L 53 Query: 120 AANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMA-FVNEQM 177 ANID I I+ AI P + L+ + I +++L+KIDL+ E + F N+ Sbjct: 54 IANIDFIGILFAIKSPNFDFTNFQKMLLNANSQNIPAVLILSKIDLVSKEELEEFFNKFK 113 Query: 178 DIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEIL-T 236 I++ + +S+ T G+ L++ + + + +G SG GKS+L+N L+G +E+L T Sbjct: 114 QIFKE-TISIFPISTETNTGITELQQYINKKSVVISGPSGAGKSTLINTLIG--EEVLAT 170 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL-WHLEPEQITQGFVEFHDYLG 295 ND+S + G+HTT +R + +ID+PG E +++ + F EF +++ Sbjct: 171 NDVSQKTKKGRHTTIESRFFMSAPHSYIIDTPGFSTLDFPKLEEKKELEKLFPEFLEFIP 230 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 CK+R+C H +P CAI+E VE I++ R++ Y L+++ Sbjct: 231 NCKFRNCIHVNEPNCAIKENVENSNISQERYDFYLYSLQNI 271 >UniRef50_D1BG37 Predicted GTPase n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG37_SANKS Length = 344 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/231 (35%), Positives = 119/231 (51%), Gaps = 11/231 (4%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +AAN+D +V+V + P ++ ++R P++VL K DL A E D Sbjct: 95 LAANVDVVVVVEPMDPRPNVRRVERMATLAWASGATPLVVLTKSDL------ALGGEVAD 148 Query: 179 IYRNI-GYRVLMVSSHTQDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILT 236 + + G VL VS+ T DGL + LT R + G SG GKS+L+NAL G E+L Sbjct: 149 VEAVVPGVEVLEVSAETGDGLDVVRSHLTASRTFVLLGPSGAGKSTLVNALAG--TEVLA 206 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 G G+HTTT L P G ++D+PG+R GL E E + Q F E Sbjct: 207 TGDVRGDGRGKHTTTHRELVPVPGLGCLVDTPGIRGVGLVADE-EGLEQAFPEVVALAAG 265 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSD 347 C++ DC+H T+PGCA+ EA+E+G + E R +Y +L +A RK D Sbjct: 266 CRFVDCEHRTEPGCAVLEAIEDGALPEVRLASYRHLLREIAHQTARKASQD 316 >UniRef50_C4L300 Ribosome small subunit-dependent GTPase A n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L300_EXISA Length = 321 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 92/300 (30%), Positives = 148/300 (49%), Gaps = 12/300 (4%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGV--NVKG 95 + + G V ++F H S +V+ C + R T +R G V + +G Sbjct: 4 QTETGRVTAQF-QHLYTVSVGDNVYTCGVSGKFRHAATSERDYPVIGDYVTIQVREHGQG 62 Query: 96 IVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 + + ER +VL+R + + I AN+D ++I A + ++ ++RY +A Sbjct: 63 TIHHLLERRTVLSRAAAGNETREQLICANVDYVLITMACGHDFNIRRLERYTLAAWDTGA 122 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISI-F 212 PIIVL K D +D + Q++ G +V VS+ T +G+ L AL +I F Sbjct: 123 IPIIVLTKTDQVDSVDTLLEDIQVNA---PGIQVFPVSAVTGEGVAELRHALPSESTIAF 179 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SGVGKS+L NAL + +T + G+HTTT L+ VID+PG+RE Sbjct: 180 VGSSGVGKSTLTNAL-AHETLAVTQAVRAQDERGKHTTTHRELFRID-DLYVIDTPGMRE 237 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 FGLW E + + F + C++RDC H +PGCA++EA+ G + R+ +Y ++ Sbjct: 238 FGLWE-GSEHLDETFRDIEALAETCRFRDCSHQKEPGCAVQEALSSGTLDAKRYASYVKL 296 >UniRef50_C8ZYN3 Ribosome-associated GTPase n=4 Tax=Enterococcus RepID=C8ZYN3_ENTGA Length = 317 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 137/256 (53%), Gaps = 13/256 (5%) Query: 96 IVEAVHERTSVLTRPDFYDGVKP----IAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 +++ V R S L R G +P IAAN+ + + + E +L ++R++ Sbjct: 61 LIDTVLPRKSFLQRK--VAGNRPDEPGIAANVTTVFLTTNANEEFNLARLERFVTIVWNS 118 Query: 152 QIEPIIVLNKIDLLDD-EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 P+IVL KID +D E A +N+ + VL + + +D E LT Sbjct: 119 GANPVIVLTKIDQMDTTETEAIINQ---LKLTFALPVLATTIY-KDERTQFEPFLTPESM 174 Query: 211 I-FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 + F G SGVGKSSLLN LLG +++ T I + G G+HTTT+ +L+ P+G VID+PG Sbjct: 175 VAFIGSSGVGKSSLLNQLLGDERQT-TKAIREEDGRGRHTTTSRQLFRLPNGAMVIDTPG 233 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +RE L + + + + C++++C+H+++P CA++EA+ G++++ F Y Sbjct: 234 MREISLETVAASSLDRHYQMIELLAEKCRFKNCRHESEPNCAVKEALASGELSQDLFNRY 293 Query: 330 HRILESMAQVKTRKNF 345 ++ + + ++ +++ Sbjct: 294 RKMEKELVYLRHKEHL 309 >UniRef50_Q6MJR6 Putative GTPase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJR6_BDEBA Length = 373 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/258 (32%), Positives = 135/258 (52%), Gaps = 18/258 (6%) Query: 95 GIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 ++ V R S R + G + +AAN+D I + + + +L +DRY+ Sbjct: 96 AVIHEVLSRQSCFYRKEPGSGARAQIVAANVDVIFVAVSANQDFNLKRLDRYMSLAWESN 155 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLE-EALTGRISI 211 P+IVL K DL +D + E D R+ V VS+ + L+PL+ L G+ + Sbjct: 156 ASPVIVLTKADLAED-LKGLIAEVED--RHPAVPVHAVSALDPESLEPLKTHLLPGKTVV 212 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 G SGVGKS+L N LL +++I T I ++ G+HTTT+ LY P G ++D+PG+R Sbjct: 213 LLGSSGVGKSTLGNLLLE-KEQIKTQGIREDDDKGKHTTTSRSLYQLPSGALLMDTPGMR 271 Query: 272 EFGLW-HLEPEQITQGFVE-FHDYLGL---CKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 E GL H E GF F D L L C+++DC+H T+PGCA++ A+ ++ R+ Sbjct: 272 ELGLLDHRE------GFENLFDDILELATHCRFKDCQHQTEPGCAVQAALASEELEVGRW 325 Query: 327 ENYHRILESMAQVKTRKN 344 E++ + + + + N Sbjct: 326 ESFQNLERELRYFERKTN 343 >UniRef50_D1V939 GTPase EngC n=1 Tax=Frankia sp. EuI1c RepID=D1V939_9ACTO Length = 360 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 140/271 (51%), Gaps = 24/271 (8%) Query: 73 LVTGDRVVW---RPGKPAAEGVNVKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIV 127 +V GDRV G+P A V+ ERTSVL R D +PI AN D++V Sbjct: 100 VVVGDRVSLVGDTSGRPGALARIVR-----RAERTSVLRRTADDTDPSERPIVANADRLV 154 Query: 128 IVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR 186 IV+A+ P +IDR LVA +EP++ L K DL DD + ++YR +G Sbjct: 155 IVAALADPPPRTGLIDRCLVAAYDGGLEPVLCLTKADLADDGAL------RELYRPLG-- 206 Query: 187 VLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLG-LQKEILTNDISDNSGL 245 V++V+S L E +TGR+S+ G SGVGKS+L+N L+ +EI ++ +G Sbjct: 207 VMIVTSRPDVDPAELRELITGRVSVMFGHSGVGKSTLVNRLVPDAAQEI--GAVNAVTGR 264 Query: 246 GQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHD 305 G+HT++AA P GG V+D+PGVR FGL + ++ F E + C C H Sbjct: 265 GRHTSSAAVALPVPGGGWVVDTPGVRSFGLGAVSLARVLAAFAELAEAAADCPP-GCTHA 323 Query: 306 TD-PGCAIREAVEEGKIAETRFENYHRILES 335 C + EAV +G+ R + R+L + Sbjct: 324 EGLADCGLDEAVRDGRAEPARLASLRRLLAA 354 >UniRef50_Q8R685 Putative ribosome biogenesis GTPase rsgA n=15 Tax=Fusobacterium RepID=RSGA_FUSNN Length = 285 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 87/290 (30%), Positives = 153/290 (52%), Gaps = 28/290 (9%) Query: 57 ADGDVHRCNIRRTIR------SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP 110 ++G V C +R ++ + V GDRV E IVE + +R ++L RP Sbjct: 13 SNGQVFECKLRGILKKTNNKYNCVVGDRV---------EISEDNSIVE-IFKRDNLLIRP 62 Query: 111 DFYDGVKPIAANIDQIVI-VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEG 169 I AN+D + I +A P + I+ L+ +I+PI+++NKID L +E Sbjct: 63 --------IVANVDYLAIQFAAKHPNIDFERINLLLLTAFYYKIKPIVIVNKIDYLTEEE 114 Query: 170 MAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLG 229 + + E++ I + ++S + GL+ +E L +I++ G SGVGKSS +N L Sbjct: 115 LVELKEKLSFLERISVPMFLISCYQNIGLEEVENFLKDKITVIGGPSGVGKSSFIN-FLQ 173 Query: 230 LQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP-EQITQGFV 288 ++ + T +IS+ G+HTT + + GG +ID+PG + ++E E++ F Sbjct: 174 SERILKTGEISERLQRGKHTTRDSNMIKMKAGGYIIDTPGFSSIEVPNIENREELISLFP 233 Query: 289 EFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 EF + + CK+ +C H +PGC +++ VEE KI++ R++ Y + LE + + Sbjct: 234 EFLN-IDSCKFLNCSHIHEPGCNVKKQVEENKISKERYDFYKKTLEILLE 282 >UniRef50_A0JYB3 GTPase EngC n=8 Tax=Micrococcineae RepID=A0JYB3_ARTS2 Length = 371 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 45/353 (12%) Query: 13 RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNI----RR 68 R+ N + +K++P +DD + G I+ G + V D R I R Sbjct: 14 RIRPNKKGSRPRTKDRPSHDDAVTGR----IITVDRGRYTAVVGEDSGNERTVIAARARE 69 Query: 69 TIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV-KPIAANIDQ-I 126 RS V V G + + +V+ RT + D D + + + AN DQ + Sbjct: 70 LRRSPVVAGDFVSLVGDVSGAPDTLARLVKIQDRRTLLRRSADDTDPIERAVVANADQLV 129 Query: 127 VIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR 186 V+V+A PE IDR LVA IEP++++ K D+ D E + YR++ + Sbjct: 130 VVVAAANPEPRTGFIDRALVAAYDAGIEPLLLVTKADVKDP------TELLSNYRHLDFP 183 Query: 187 VLM----------VSSHTQDGLKP---------LEEALTGRISIFAGQSGVGKSSLLNAL 227 V++ + + + DGL L L G++++ G SGVGKS+++NAL Sbjct: 184 VIISRTADAAASGIDARSDDGLSARLDSDAVSQLRAHLNGKVTVMLGHSGVGKSTMVNAL 243 Query: 228 LGLQKEILTNDISDNSGLGQHTTTAA---RLYHFPHGGDVIDSPGVREFGLWHLEPEQIT 284 G ++ T ++ +G G+HT+++A R+ P G +ID+PG+R FGL H++P++I Sbjct: 244 TGAERA--TGGVNAVTGRGRHTSSSALALRISDAPAGSWIIDTPGIRSFGLAHVDPDRIL 301 Query: 285 QGFVEFHDYLGLCKYRDCKHDTDP-GCAIREAVEEGKIAET---RFENYHRIL 333 + F + C+ R CKHD C + V +G + R + R+L Sbjct: 302 RSFPDLEPGTDACE-RGCKHDASAVNCGVDAWVAQGHAGPSGAARLASLRRLL 353 >UniRef50_Q8YUA3 Putative ribosome biogenesis GTPase rsgA 1 n=19 Tax=Cyanobacteria RepID=RSGA1_ANASP Length = 370 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 147/292 (50%), Gaps = 40/292 (13%) Query: 61 VHRCNIRRTIRSLVTGDRVV-----WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG 115 R +++ + ++ GDRVV W G+ G + V R + L RP Sbjct: 58 TRRTRLKKIGQQVMVGDRVVVEEPDWAGGR---------GAIADVLSRQTQLDRP----- 103 Query: 116 VKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 PIA N DQI++V A+ P L + R+LV ET ++ ++ LNK DL+ E ++ Sbjct: 104 --PIA-NADQILLVFAVADPPLEPYQLSRFLVKAETTGLDVVLCLNKSDLVSPEIQQQIS 160 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 +++ + GY+ L +S Q + + + L+ +I++ AG SGVGKSSL+NAL+ + Sbjct: 161 DRLLAW---GYQPLFISVENQINIDQIAKYLSNKITVVAGPSGVGKSSLINALIP-NINL 216 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 ++S G+HTT L+ P+GG + D+PG + + PE++ F E + L Sbjct: 217 RVGEVSGKLARGRHTTRHVELFELPNGGLLADTPGFNQPDV-DCSPEELVHYFPEARERL 275 Query: 295 GL--CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 + C++ DC H +P CA+R E R+E+Y LE +A R+ Sbjct: 276 AIASCRFNDCSHRDEPDCAVRGDWE-------RYEHY---LEFLADAIARQT 317 >UniRef50_C7QYQ8 GTPase EngC n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYQ8_JONDD Length = 341 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 116/234 (49%), Gaps = 10/234 (4%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +AAN+D + +V P+ I+R L PI++L K DL+D + V E Sbjct: 91 LAANVDAVFVVEPAYPQPHHRRIERMLTLAWASGARPIVLLTKSDLVDHD---VVTEVES 147 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 + R G V+ VSS T L L ++ G I G SG GKSSL+NAL G +L Sbjct: 148 VTR--GVEVISVSSETGHHLDVLAGLISPGDTFILLGPSGAGKSSLVNALAG--APVLAT 203 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 G G+HTTT L G +ID+PG+R G+ E + F + C Sbjct: 204 GEVRGDGRGRHTTTRRELITIEGLGSLIDTPGLRSVGMTAQE-AGLEATFDDIASLAAQC 262 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN-FSDTDD 350 ++ DC H T+PGCA++ AV+E + R +NYHRI +A RKN +S D+ Sbjct: 263 RFSDCAHATEPGCAVQRAVDELALDPRRLDNYHRIEREIAHQARRKNAYSRVDE 316 >UniRef50_B8FMP2 GTPase EngC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMP2_DESAA Length = 360 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 118/237 (49%), Gaps = 22/237 (9%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDL--------LDDEGM 170 IAAN+D + IV + + ++ I+RYL P+++LNK DL + E + Sbjct: 109 IAANLDTVFIVCGLDRDYNVRRIERYLTLIYNCGCSPVVILNKADLHPAPLDCAAEVESV 168 Query: 171 AFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLG 229 AF G V VS+ + G++ L + L G+ + G SG GKS+L+N L G Sbjct: 169 AF-----------GVPVFAVSAKSGQGVEVLRQFLPPGQTAALLGSSGAGKSTLVNQLSG 217 Query: 230 LQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVE 289 + ++S+ G G HTTT + P G ++D+PG+RE LW + I F + Sbjct: 218 AEVRA-AKEVSEAVGKGVHTTTTRDIIPIPGAGMILDNPGIREIALWD-DAGGIDDAFPD 275 Query: 290 FHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 C Y DC H+ +PGC +REAVE G + R +NY ++ + + + R+ S Sbjct: 276 IQALAKECHYTDCTHEHEPGCRVREAVEIGVLKPARLQNYLKMQKELEFLNQRQEKS 332 >UniRef50_D0LXL5 GTPase EngC n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LXL5_HALO1 Length = 361 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 5/206 (2%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +AAN+D +V+A +L+ ++RYL A +P+IV+NKIDL+D++ A +++ Sbjct: 109 VAANVDVFFLVTAADRDLNPRRLERYLAAVWDSGAQPVIVVNKIDLVDEDEAARALHRVE 168 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 V VS+ G+ L L G G SGVGKS+L N LLG E+ Sbjct: 169 AIAGAAS-VAGVSAMAGSGVDALAPFLGVGATVGLIGSSGVGKSTLSNRLLG--DEMQAA 225 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 + G G+HTTT L P GG +ID+PG+REFG+ + F E + C Sbjct: 226 AATRGDGKGRHTTTRRELRVLPGGGVLIDTPGMREFGM-LGGEGGLEVAFAELAEVAARC 284 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAE 323 ++RDC HD +PGCA+ AV EG++ E Sbjct: 285 RFRDCTHDDEPGCAVLAAVAEGELGE 310 >UniRef50_Q28KH3 GTPase EngC n=5 Tax=Rhodobacteraceae RepID=Q28KH3_JANSC Length = 347 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 82/264 (31%), Positives = 138/264 (52%), Gaps = 20/264 (7%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSA 131 VTGD V+ AAEG+ ++ + ER ++LTR G++ IAAN+D + IV++ Sbjct: 62 VTGDWVL----ADAAEGLVLRRL-----ERDTLLTRRAAGTGLEAQLIAANVDTLGIVTS 112 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLM-- 189 + ++ ++RYL + P+I+L K D+ DD + + + + M Sbjct: 113 CNADFNVARLERYLAMAASAGCLPLIILTKADMADDP--RDYERRAEALSPLASAIAMNA 170 Query: 190 VSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 + + D LKP + TG+ G SGVGK++L NAL G ++ T I ++ G+HT Sbjct: 171 KADNAADMLKPWSK--TGQTFALVGSSGVGKTTLANALTGAEEA--TAGIREDDAKGRHT 226 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG 309 TT+ L GG +ID+PG+R L + + I F + CK+RDC H ++PG Sbjct: 227 TTSRGLARTIFGGWLIDTPGMRALRL-NDASDGIGAVFADIEALTEACKFRDCAHLSEPG 285 Query: 310 CAIREAVEEGKIAETRFENYHRIL 333 CA++ A+ +G + E R + +++ Sbjct: 286 CAVQAAIADGTLDEDRLRRFQKLV 309 >UniRef50_C8PML9 Ribosome small subunit-dependent GTPase A n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PML9_9SPIO Length = 316 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 95/317 (29%), Positives = 151/317 (47%), Gaps = 31/317 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAV 100 +G+V+S V + +G+V RC+I+ + G P A G V + + Sbjct: 2 QGLVLSGANNFFVVRTPEGNVVRCSIKGKKLKEIRGYY------NPLAPGDTVDIEYDTL 55 Query: 101 H----ERTSVLTRPDFY-------DGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVAC 148 H + T+++ R + + + +AANID ++ V+ P DR LV Sbjct: 56 HPDQGQITALVPRRNGFIRWNQKTRSPQLLAANIDLLLCVTTPANPPFRPRFTDRTLVQA 115 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 I +I++NKIDL E V E++ ++ IG +V VS+ T++GL+PL L+G+ Sbjct: 116 AAEGISALIIVNKIDLGIPEA---VRERIRDWQRIGIQVCEVSAKTREGLEPLARLLSGK 172 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGG------ 262 GQSGVGKSSLLN+L + T DIS G HTTT Sbjct: 173 TCAVTGQSGVGKSSLLNSLDPCHA-LKTADISFKYDRGIHTTTQGVFLPMTFTAQDGTQL 231 Query: 263 --DVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKY-RDCKHDTDPGCAIREAVEEG 319 ++ID+PG+R F LW ++PE++ F E C + C H + GC I E + G Sbjct: 232 SFNIIDTPGIRHFALWGIKPEEVIFYFPEMEAPALQCAFGLSCSHIHEQGCRILEELNAG 291 Query: 320 KIAETRFENYHRILESM 336 +I R+E++ + + + Sbjct: 292 RIHPDRYESWRSMRDEL 308 >UniRef50_Q8YK41 Putative ribosome biogenesis GTPase rsgA 2 n=3 Tax=Cyanobacteria RepID=RSGA2_ANASP Length = 353 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 120/221 (54%), Gaps = 10/221 (4%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD--DEGMAFVNEQ 176 +AAN+D + +V + + + I+RYL+ P+IVLNK DL + DE ++ V Sbjct: 108 VAANVDTVFLVCGLDGDFNPRRIERYLILAWESGANPVIVLNKADLCNSLDECISEVEAV 167 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEIL 235 IG +L++S+ G+ L+ L G+ G SGVGKS++ N L G + + Sbjct: 168 A-----IGVPILVLSATNNQGIDTLKAYLQPGQTVALLGSSGVGKSTITNQLKGASVQAV 222 Query: 236 TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG 295 + G+HTTT L P GG ++D+PG+RE +W + E + + F + Sbjct: 223 -QPVRQGDDRGRHTTTNRELILLPTGGLIVDTPGMREIQIWAGD-ESLQETFADIETLAP 280 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 C++R+C+H +PGCA+++A+ EG++ +RF Y ++ + + Sbjct: 281 ECRFRNCQHHNEPGCAVQQALLEGELDYSRFLGYQKLQKEL 321 >UniRef50_D2UC76 Probable gtpase engc protein n=1 Tax=Xanthomonas albilineans RepID=D2UC76_XANAL Length = 370 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 17/225 (7%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD--DEGMAFVNEQ 176 IAANID + IV + + + I+RYL+ P++VL K DL + D+ +A ++E Sbjct: 116 IAANIDTVFIVCGLDADFNPRRIERYLLLVGGGGAAPVVVLTKADLTEYADDALAVLDE- 174 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEIL 235 +L V++ D + L L G+ + G SG GKS+L N LLG+ K + Sbjct: 175 ---LAAQSIPLLTVNATQADSVAVLRPWLQPGQTVVLVGSSGAGKSTLTNTLLGVHK-MR 230 Query: 236 TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP---EQITQG-FVEFH 291 T + + G+HTTT L P G +ID+PG+RE L+P E + +G F + Sbjct: 231 TAAVRERDSRGRHTTTHRALLPLPSGACLIDTPGMRE-----LKPTGEEDLAEGAFADIE 285 Query: 292 DYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 C++ DC H +PGCA++ A+E G+I R NY ++ E + Sbjct: 286 ALAAQCRFNDCAHQAEPGCAVQAAIERGEIDAARLANYLKLREEV 330 >UniRef50_Q0F2Y7 GTP-binding protein, putative n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2Y7_9PROT Length = 366 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 130/254 (51%), Gaps = 11/254 (4%) Query: 97 VEAVHERTSVLTRPDF-YDG-VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 + V R ++L R YD + +A+NID IV + + ++ ++R+LV IE Sbjct: 84 IHTVLPRKTLLKRKTVGYDEEFQMLASNIDVAFIVMSCHYDFHVSKLERFLVMIHEAHIE 143 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGY--RVLMVSSHTQDGLKPLEEALTGRIS-I 211 P+++ K DL+ E + + +D R G ++L +S+ T +G++ + + R + Sbjct: 144 PVLLFTKSDLITPEALQLL---IDDIRAAGIDIKILALSNITGEGVEQVRRLIEPRKTYC 200 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 G SGVGKSSL+N L+G +I SG G+HTT L HGG +ID PG+R Sbjct: 201 MLGSSGVGKSSLMNRLIG--SDIFETQTVSTSGQGRHTTVRRHLILLDHGGMLIDMPGMR 258 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 E + + E I F + + C++ DC H+ +P CAI+ A+ +GK+ + NY + Sbjct: 259 ELAVAEVS-EGIEGSFADILELAATCRFSDCSHNNEPDCAIQAALADGKLNADHYRNYLK 317 Query: 332 ILESMAQVKTRKNF 345 I + K + F Sbjct: 318 IQKESRHHKKQTAF 331 >UniRef50_Q2BLA6 GTPase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLA6_9GAMM Length = 356 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 122/224 (54%), Gaps = 6/224 (2%) Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNE 175 ++ IAANID + I S+ + +LN I+RYL I ++VL K+DL +D + + Sbjct: 105 IQMIAANIDTLFITSSCNDDFNLNRIERYLAIAAESHIHCVLVLTKMDLCNDPSVYL--D 162 Query: 176 QMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEI 234 Q+ I + V +V++ + + L + + +G+ G SGVGKS+L+N L G + Sbjct: 163 QLKI-SHPSLSVELVNAIDAESIAGLRQWIASGQTVALVGSSGVGKSTLINGLKGSDDQ- 220 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T I ++ G+HTTT+ L+ P GG ++D+PG+RE + I F + ++ Sbjct: 221 ETASIREHDSKGRHTTTSRSLHLLPQGGLLLDTPGMRELQIVD-SAAGINSAFDDINELA 279 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 C++ DC H +PGC + +AVE G++ R NY ++L A+ Sbjct: 280 RGCRFTDCTHHNEPGCTVVDAVEAGRLEPRRLFNYQKLLVEQAR 323 >UniRef50_A1ZFA4 Ribosome small subunit-dependent GTPase A n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFA4_9SPHI Length = 357 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 135/255 (52%), Gaps = 8/255 (3%) Query: 94 KGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 + I+ V R++V TR + + IAANID ++IV + +L ++RYLV Sbjct: 83 QAIIHGVLPRSTVFTRNAAGKRNQAQVIAANIDYLLIVQSADQNYNLRRLERYLVMAAEG 142 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRIS 210 I P++VL+K+DL D E++ + + V+ VS+ + G K L + + G+ Sbjct: 143 GIAPVVVLSKVDLATDWQQKM--EELQSF-DADLPVISVSNTSAIGYKALSQWIKPGKTL 199 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGKS+L+N LL ++ T + D G+HTTT ++ +G +ID+PG+ Sbjct: 200 AVVGSSGVGKSTLINHLLDTPQQA-TQTVRDKDDKGKHTTTRREMFITQNGSILIDTPGM 258 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE LW + I Q F + C + DC H + CA+ A++ G+++E R+++Y Sbjct: 259 RELQLWE-SKQGIGQVFTDVEVLAQDCHFGDCSHTNEIKCAVLAALDSGELSEERYQSYL 317 Query: 331 RILESMAQVKTRKNF 345 ++ + +++ +F Sbjct: 318 KLQKEADYLESSADF 332 >UniRef50_C0R0A9 Ribosome-associated GTPase n=2 Tax=Brachyspira RepID=C0R0A9_BRAHW Length = 367 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 84/267 (31%), Positives = 132/267 (49%), Gaps = 21/267 (7%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSA 131 V GD V+ + A ++ + R ++L R + ++ I +NID I+ Sbjct: 75 VVGDWVLMKKSDNNA-------FIDTILTRKNILYRKANVKKNDIQAIVSNIDYAFIIVG 127 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD----EGMAFVNEQMDIYRNIGYRV 187 I E+ ++ I RYL T I+PII ++KIDL +D E +A + E Y Sbjct: 128 IDNEMPMSAIARYLSVVHTSGIKPIIAISKIDLYEDAEYKELLAAIKETYPNETAFAY-- 185 Query: 188 LMVSSHT-QDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLG 246 SS T ++ L+ S+F G SG GKS+++N LL +K + T ++ + G Sbjct: 186 ---SSKTGKNADTFLKYIKKDTSSVFIGASGAGKSTIINYLLKDEK-MKTQEVREYDFKG 241 Query: 247 QHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDT 306 HTTT L GG VID+PG+R GLW + + I + F + +Y CK++DC H Sbjct: 242 MHTTTHRELLVLDSGGVVIDTPGLRNLGLWE-DDKGIKKTFEDLEEYAKKCKFKDCTHQH 300 Query: 307 DPGCAIREAVEEGKIAETRFENYHRIL 333 +P C I E +E +I R++ Y +L Sbjct: 301 EPDCYILELLENDEIPYERYDAYVTLL 327 >UniRef50_A1R8G6 Ribosome small subunit-dependent GTPase A n=3 Tax=Arthrobacter RepID=A1R8G6_ARTAT Length = 395 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 87/279 (31%), Positives = 140/279 (50%), Gaps = 19/279 (6%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKP---IAANIDQIVIVS 130 TGD VW A E +VE V R S L+R Y+ + +NID + +V Sbjct: 86 ATGD-WVWLGHNTAGE----PAVVE-VLPRHSALSRKRAYEASSEEQILGSNIDIVAVVV 139 Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKIDL--LDDEGMAFVNEQMDIYRNIGYRVL 188 + L+ N ++R LVA P++V+ K DL L D+ + V I + G V+ Sbjct: 140 PVDRPLTHNRLERTLVAAWDSGATPLVVITKADLAHLADDVVGEV-----ILQAGGVDVV 194 Query: 189 MVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQ 247 S+ DGL L + + G + G SG GKS+L+NAL G + + T + G G+ Sbjct: 195 TTSAEQGDGLDELMQHIPDGATLVLLGPSGAGKSTLINALAGREVQ-QTGAVRAGDGKGK 253 Query: 248 HTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD 307 HTTT+ L G ++D+PGVR FGL+ + E + + F + D C++ DC H + Sbjct: 254 HTTTSRELVPLAGGAVLMDTPGVRGFGLFDAD-EGMEEMFGDLEDLFSRCRFTDCAHQAE 312 Query: 308 PGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 PGCA++EA+ E + R+ +Y ++ +A + + + + Sbjct: 313 PGCAVQEALAEENLDPRRWASYLKLQRELAALARKHDAA 351 >UniRef50_B1AIK5 Putative ribosome biogenesis GTPase rsgA n=15 Tax=Ureaplasma RepID=RSGA_UREP2 Length = 303 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 76/254 (29%), Positives = 143/254 (56%), Gaps = 21/254 (8%) Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIE 154 ++ ++ER + L RP ANID ++IV +I+ P+L+ +++YL E I+ Sbjct: 57 LITKIYERYNQLIRPK--------VANIDIVLIVVSIVQPDLNTLSLNKYLAFYEARNIK 108 Query: 155 PIIV-LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +++ L+K DL ++ +N+ + Y+ Y V +++ ++ + L+E + + A Sbjct: 109 NVLIGLSKYDLANNHLKQKINKLILDYKKNNYAVFILTK--ENDILLLKEKIKSKTLCLA 166 Query: 214 GQSGVGKSSLLNAL-LGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SGVGKS+L+N L +Q+ T +IS G+HTTT+ +L F +G ++D+PG Sbjct: 167 GNSGVGKSTLINKLDPSIQQR--TQEISHFLNRGKHTTTSTKLISFANGF-LVDTPGFGN 223 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + +L ++ F +F +Y CK+ +C H +P CAI++AV+E I R+++Y +I Sbjct: 224 LEV-NLTKNEMANAFNDFANYARFCKFSNCLHIEEPECAIKKAVDEKLIVNWRYDDYLKI 282 Query: 333 LESM----AQVKTR 342 ++ + ++KTR Sbjct: 283 IKELPNDVLKIKTR 296 >UniRef50_A6CYS2 Ribosome-associated GTPase n=2 Tax=Vibrionaceae RepID=A6CYS2_9VIBR Length = 344 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 134/254 (52%), Gaps = 10/254 (3%) Query: 96 IVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAI--LPELSLNIIDRYLVACETL 151 ++E++ +R S+++R + + IAAN+D IV + S +++R L Sbjct: 63 LIESIKKRKSLVSRKASGEATVQQTIAANVDYTFIVMGLDGGRNYSDRLLERLLTVAWNS 122 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRIS 210 P+++LNK DL +E V Q + +G ++ S+ G+ + L G++ Sbjct: 123 GATPVVILNKSDL--NEDAELVQMQAETIA-LGIDIITCSALDGTGINDVMTYLANGKVG 179 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 +F G SGVGKS+L N LL Q + TN + G+HTT+++ L+ +GG ++D+ G+ Sbjct: 180 VFIGPSGVGKSTLTNTLLQYQAQ-KTNGLRLQDMRGRHTTSSSYLFELENGGFIVDTSGI 238 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 +E W I F E CKYR+C+H+ +PGCA+++ +E G I R+++Y Sbjct: 239 KEVQAWA-NGNDIDSVFEEISLVAQDCKYRNCQHEGEPGCAVQKELEAGNITPERYDSYL 297 Query: 331 RILESMAQVKTRKN 344 + + A ++ RK+ Sbjct: 298 NLKQEHAFLERRKS 311 >UniRef50_Q601H2 Putative ribosome biogenesis GTPase rsgA n=4 Tax=Mycoplasma RepID=RSGA_MYCH2 Length = 285 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 19/243 (7%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQ 152 KG ++ ++ER + L RP ANIDQ +V +S P S ++D++L+ E Sbjct: 51 KGFIKKIYERKNQLIRPK--------VANIDQALVFISIREPNFSSLLLDKFLLVIEAKN 102 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 I I+++ KIDL + F N +D Y+ + Y + +++ + L+ L +++ Sbjct: 103 IPVILLVTKIDLDSN----FENLLLD-YQKMNYNIFFINNKKNEIPVELKAELEKKLNFV 157 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 GQ+GVGK+S +N L K+ +IS G+HTT ++ +IDSPG Sbjct: 158 IGQTGVGKTSFINNFL--DKKFAIQEISQTLNRGKHTTRVVQIIE-KENFRIIDSPGFSS 214 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKH--DTDPGCAIREAVEEGKIAETRFENYH 330 F + +I F F + CK+R C H + C I+ A+++GKI E R++NY Sbjct: 215 FSYSEISKNEIRNAFKIFKKFSSDCKFRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYL 274 Query: 331 RIL 333 L Sbjct: 275 YFL 277 >UniRef50_B1YJQ5 Ribosome small subunit-dependent GTPase A n=67 Tax=Bacillales RepID=B1YJQ5_EXIS2 Length = 349 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 85/274 (31%), Positives = 142/274 (51%), Gaps = 18/274 (6%) Query: 76 GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAIL 133 GD V+ + G+ A KG +E V R++ +R + I AN+D ++V A Sbjct: 60 GDWVI-QSGREAG-----KGRIERVLPRSTQFSRKAAGTETEEQVICANVDIALLVMAFG 113 Query: 134 PELSLNIIDRYLVACETLQIEPIIVLNKIDLLD--DEGMAFVNEQMDIYRNIGYRVLMVS 191 + ++ ++RYL P+IVL K L DE F++E + Y V Sbjct: 114 HDFNVRRLERYLTVAWEAGATPVIVLTKKSLTASADE---FLSEVEAVAFGTPY--FAVD 168 Query: 192 SHTQDGLKPLEEALTGRISI-FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTT 250 S T +GL L EAL +I G SGVGKS+L+NAL ++ + T + ++ G+HTT Sbjct: 169 SLTGEGLDDLREALRPNETIVLVGSSGVGKSTLVNAL-AEEQLMETGGVREDDERGRHTT 227 Query: 251 TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGC 310 T L G ++D+PG+RE GLW + +T F + + C++RDC+H +PGC Sbjct: 228 THRELKRLSSGLLLVDTPGMRELGLWD-GTDGLTSTFSDIEELAESCRFRDCQHGEEPGC 286 Query: 311 AIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 A++ A+ EG ++ R+ ++ ++ +A + ++N Sbjct: 287 AVQAALTEGTLSHERWGSFLKLKHEVAYAERKQN 320 >UniRef50_B0JW21 Putative ribosome biogenesis GTPase rsgA n=8 Tax=Cyanobacteria RepID=RSGA_MICAN Length = 358 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 92/279 (32%), Positives = 139/279 (49%), Gaps = 31/279 (11%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 R +++ +S++ GDRV E N A+ E VL R D +P Sbjct: 37 TRRARLQKIGQSVMVGDRV-------RVEEANFGDQQGAIAE---VLPRSTEID--RPAV 84 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 ANI+QI++V A+ P L +I R+LV E+ +E + +NKIDL + E + +++ Sbjct: 85 ANIEQILLVFALAEPVLDPWLISRFLVKAESTGLEIAVCVNKIDLGEPEQIEVWGDRLAG 144 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI--LTN 237 + GYR VS G + L L +I++ AG SGVGKSSL+N L+ EI Sbjct: 145 W---GYRPFFVSVEKNRGFEALLAQLNHKITLLAGPSGVGKSSLINCLI---PEINQRVG 198 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL- 296 D+S G+HTT +L+ P+ G + DSPG + + L PE++T F E L L Sbjct: 199 DVSGKLQKGRHTTRHVQLFALPNRGLLADSPGFNQPDINCL-PEELTFYFPEVRARLALG 257 Query: 297 -CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 C++ DC H +P C +R E R+++Y LE Sbjct: 258 NCQFNDCTHRREPNCVVRGDWE-------RYQHYLEFLE 289 >UniRef50_B2SLQ8 Putative ribosome biogenesis GTPase rsgA n=19 Tax=Xanthomonadaceae RepID=RSGA_XANOP Length = 363 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 15/220 (6%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD-DEGMAFVNEQM 177 IAANID + IV + + + I+RYL+ +P++VL K D + E V E++ Sbjct: 116 IAANIDTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQTEHAEDALAVLEEL 175 Query: 178 DIYRNIGYRVLMVSSHTQ-DGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 + +NI R L L+P GR ++ G SG GKS+L N LLG +K + T Sbjct: 176 EA-QNIPLRALNAKDPASVAALRPWLG--DGRTAVLVGSSGAGKSTLTNTLLGTEK-MKT 231 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP---EQITQG-FVEFHD 292 N + +N G+HTTT L P G +ID+PG+RE L+P E + +G F + Sbjct: 232 NGVRENDSRGRHTTTHRALIPLPSGACLIDTPGMRE-----LKPTGEEDLAEGGFSDVEA 286 Query: 293 YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 C++ DC H +PGCA+R A+E + R NY ++ Sbjct: 287 LAAQCRFNDCAHIAEPGCAVRAAIEADLLDPERVANYMKL 326 >UniRef50_C7MLK1 Predicted GTPase n=4 Tax=Coriobacteriaceae RepID=C7MLK1_CRYCD Length = 355 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 142/295 (48%), Gaps = 19/295 (6%) Query: 54 VESADGDVHRCN-----IRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLT 108 V A GD+ RC ++ + V GD V K + K + + R VL Sbjct: 17 VRLASGDLIRCKHATSLVKEATQRAVIGDWV-----KIETDDAADKAQIVEILPRQQVLL 71 Query: 109 RPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLV-ACETLQIEPIIVLNKIDLL 165 R D + V+ +AAN D VI++ LP L++ ++R LV AC+T ++ L K DL+ Sbjct: 72 RKDPAERSMVQVLAANFD-TVIIAHPLPGLNIRRLERELVVACDT-GARVVVALTKSDLV 129 Query: 166 D-DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSL 223 + D+ + G V+ VS+ Q G+ + + TG ++ G+SG GKSSL Sbjct: 130 ESDQVRTDAVAAVQAVVAPGIGVIEVSTVNQIGIDAVRALVSTGTQAVLMGRSGAGKSSL 189 Query: 224 LNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQI 283 +NAL Q+ T + G G+HTT + GG+VID PGVR GLW + I Sbjct: 190 INALAD-QEVQATQPVRAADGKGRHTTVNRTMVRIQGGGEVIDMPGVRGLGLWDAQAG-I 247 Query: 284 TQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 F + + C++RDC+H D GC + A++ G I R Y R+ E +Q Sbjct: 248 DAAFPDVVEAARNCRFRDCRHQGDAGCGVGAAIKAGNITPERVAAYVRLSEENSQ 302 >UniRef50_Q8EUL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Mycoplasma penetrans RepID=RSGA_MYCPE Length = 287 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 132/247 (53%), Gaps = 18/247 (7%) Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIE 154 ++E + ER ++L RP ANID ++IV+++ P+ S ++++L E I Sbjct: 55 VIEKIDERKNLLIRPK--------VANIDTLIIVNSVKEPDFSSYGLNKFLAFYEARNIN 106 Query: 155 PIIV-LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +I+ +K+DLL+ + +N+ + Y GY VL ++ K L + + FA Sbjct: 107 NVIIYFSKMDLLNKQESKNMNQIISQYEQNGYIVLNSLDKEKNKEKILN-MIKNNVVCFA 165 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQSGVGKS+L+N L+ E+ T +IS G+HTTT++ + F G VID+PG F Sbjct: 166 GQSGVGKSTLINFLIP-DLELRTQEISQALNRGKHTTTSSLMIPFNEGF-VIDTPG---F 220 Query: 274 GLWHLEPEQI--TQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 G L Q+ F +F + CK+++C H + C I++ V+E KI + R+ +Y + Sbjct: 221 GSLDLNMTQLELANSFTDFRNNSVHCKFKNCLHTNEQNCFIKKMVDENKIYKQRYLDYLK 280 Query: 332 ILESMAQ 338 + + + Sbjct: 281 MFSEIKK 287 >UniRef50_A4XB51 GTPase EngC n=105 Tax=Bacteria RepID=A4XB51_SALTO Length = 374 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 95/286 (33%), Positives = 134/286 (46%), Gaps = 37/286 (12%) Query: 71 RSLVTGDRVVW---RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV-------KPIA 120 +S+V GDRV G P A V+ + R+SVL R D + + Sbjct: 86 KSVVVGDRVGLVGDTSGTPGALARIVR-----IAGRSSVLRRTAEDDATTAEGRLERVVV 140 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN DQ+VIVSA+ P IDR LVA I P++ L K DL E + ++++ Sbjct: 141 ANADQLVIVSALADPPPRTGFIDRCLVAAYDAGIAPLLCLTKADLAGPEEVLGYYAELEL 200 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDI 239 VL+ T DGL+ L L GRIS+ G SGVGKS+L+N L+ T + Sbjct: 201 PH-----VLICPDSTLDGLRGL---LAGRISVLVGHSGVGKSTLVNRLV----PAATRTV 248 Query: 240 SDNS--GLGQHTTTAARLYHFPHGGD-----VIDSPGVREFGLWHLEPEQITQGFVEFHD 292 S G G+HT+T+ P D +ID+PG+R FGL H+ E + GF + + Sbjct: 249 GQVSAIGRGRHTSTSVVALQLPPVADSAEGWIIDTPGIRSFGLAHVSAESLLHGFPDLTE 308 Query: 293 YLGLCKYRDCKHDT-DPGCAIREAVEEGKIAETRFENYHRILESMA 337 C +C H +P C + V G+ R +Y R+L S A Sbjct: 309 GAADCPA-NCPHTIGEPLCGLGVRVTAGQADPRRLASYRRLLASRA 353 >UniRef50_C4FBQ3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FBQ3_9ACTN Length = 382 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 9/225 (4%) Query: 119 IAANIDQIVIVSAILPE-----LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFV 173 +AAN+D I IV + E L + + R LV +P++VL K+D + +A V Sbjct: 147 LAANVDVIFIVQPLGAERDTLPLMRDRVARSLVLARDCGADPVVVLTKVDRCEPAEVANV 206 Query: 174 NEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQK 232 + G RV+ SS T +GL + + G + + G+SG GKS+LLN LLG + Sbjct: 207 CGALRRLAGTGVRVIATSSLTGEGLDEVRSCIPQGSVGMILGESGAGKSTLLNTLLG-SE 265 Query: 233 EILTNDISDNSGLGQHTTTAARLYHFPHGGDVI-DSPGVREFGLWHLEPEQITQGFVEFH 291 + TN + + G+HTT A + P VI D PG+R L E + + F E Sbjct: 266 ALETNAVRERDDAGRHTTVARIMVALPEPCGVIADCPGLRSLPLVGHE-RGLARSFPEIV 324 Query: 292 DYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + C++ DC H +PGCA+RE VE G+I ++R + + + M Sbjct: 325 EASRACRFNDCTHLHEPGCAVREGVECGEIEQSRLDAFLSLAREM 369 >UniRef50_Q4A6T0 Putative ATP/GTP-binding protein n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6T0_MYCS5 Length = 276 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 124/234 (52%), Gaps = 13/234 (5%) Query: 109 RPDFYDGVKPIAANIDQI-VIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD 167 +P + ++P ANIDQ+ V +S P+ S ++D+YL E+ I+ II L K DL Sbjct: 54 KPRKNELIRPKVANIDQVLVFLSVKEPDFSSFLLDKYLAIVESKNIDLIIFLTKSDL--- 110 Query: 168 EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL 227 + N Y Y+V ++SS+ + +++ + SI GQSGVGK++ +N + Sbjct: 111 -DLELANHWKQKYEMQNYKVFLLSSN-DNNYDEIKKLFDKKFSIVMGQSGVGKTTFINNI 168 Query: 228 LGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPE-QITQG 286 T IS + G+HTTT+A++ F +G +IDSPG F +E E + + Sbjct: 169 SN--NNYKTQQISKSLSRGKHTTTSAKIISFLNGF-LIDSPG---FSSLDVEKEINLNKS 222 Query: 287 FVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 ++ F + LC+++DC H+ + C ++ + + E R++NY ++L+ + K Sbjct: 223 YLNFKELAKLCEFKDCMHNFEKNCNVKLNLNSNLVPEFRYKNYLKLLKEQNERK 276 >UniRef50_B2A2K9 Ribosome small subunit-dependent GTPase A n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2K9_NATTJ Length = 288 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 121/226 (53%), Gaps = 15/226 (6%) Query: 116 VKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 VKP AN+DQ+++V+++ P+ +L ++DR LV ++ ++ +NK +L D A Sbjct: 68 VKPAVANVDQVIVVTSVKNPKPNLQLVDRLLVWAYFEGLQGMVCINKREL--DYQKA--Q 123 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL---LGLQ 231 E +IY+ ++S D L L + + S+ AGQSGVGKSS+LN L L L+ Sbjct: 124 ELAEIYKTSEINTTLISVKEND-LDHLPKFFENKTSVLAGQSGVGKSSILNTLNPDLNLE 182 Query: 232 KEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFH 291 N +S +G G+HTT +L GG ++D+PG + L + PEQ+ F E Sbjct: 183 ----VNPVSRKAGTGKHTTRHCQLLK-AGGGFLVDTPGFNKKKLPEIVPEQLELAFPEIK 237 Query: 292 DYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 + CK+ DC H +P C +++ V I TR+E++ + E + Sbjct: 238 KHSSDCKFNDCSHRKEPDCQVKKLVGTD-IPTTRYEHFVKFFEELV 282 >UniRef50_A2BNE5 Predicted GTPases n=7 Tax=Prochlorococcus marinus RepID=A2BNE5_PROMS Length = 305 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 84/312 (26%), Positives = 163/312 (52%), Gaps = 44/312 (14%) Query: 42 GIVISRFGMHADVE------SADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 G+V +F + V+ S + + C ++++I D++++ + A E +++KG Sbjct: 9 GLVTKKFNDYFLVDLKNQENSLNSEKFLCKVKKSIN---FRDQLIYVGDEVAIEKIDLKG 65 Query: 96 ---IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETL 151 ++ ++ +R ++L RP ANI I + ++ PEL+L+ ++R+L++ E++ Sbjct: 66 KRAVITSLKKRKNLLVRPS--------VANISNIYVTFSVEEPELNLSQVNRFLISAESI 117 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR-IS 210 +E +VL K DL+ D+ +++ +D + GY+V+ ++ D K L L + S Sbjct: 118 GVEVSLVLTKCDLISDKRRSYL---LDKFEKWGYQVITLNLQNSDCFKNLLADLKQKECS 174 Query: 211 IFAGQSGVGKSSLLNALL-GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 IF G SGVGK++LLN ++ GL+ T +S+ G++TT L+ + ++D+PG Sbjct: 175 IFMGPSGVGKTTLLNMIIPGLENS--TAPVSNKIKRGKNTTRNVELFSISNQSYIVDTPG 232 Query: 270 VREFGLWHLEPE--QITQGFVEFHDYL---GL-CKYRDCKHDTDPGCAIREAVEEGKIAE 323 F + LE + + + E H + G+ CK+R+C H D GC + ++ E Sbjct: 233 ---FNMQTLEIDIKLLPNLYSEIHKQIVEEGIKCKFRNCLHLKDEGCNLNKSFE------ 283 Query: 324 TRFENYHRILES 335 R+ Y ++ES Sbjct: 284 -RYSFYKEMIES 294 >UniRef50_Q7VEJ4 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Prochlorococcus marinus RepID=RSGA_PROMA Length = 309 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 125/245 (51%), Gaps = 22/245 (8%) Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 G++ V R +++TRP P+A D I++VS + P LN + R+L+ E ++ Sbjct: 79 GVISFVEPRKNLITRP-------PVANVTDVIIVVSLLDPSFDLNQVSRFLMKAEETGLK 131 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFA 213 IVL K DL+D++ + ++++ + GY+ + +S +G++ L L + ++ + Sbjct: 132 VTIVLTKRDLIDEKILEKYDKKLQTW---GYQPIPISIVNGEGIQKLSARLKSMKLGVLC 188 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKSSL+N LL + I +S G+HTT L+ + D+PG + Sbjct: 189 GPSGVGKSSLINYLLP-KISIPIGKLSKKLKRGRHTTRHVELFSIYSDSFIADTPGFNK- 246 Query: 274 GLWHLEPEQITQGFVEFHDYLGL--CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 ++ EP Q+ Q F E L + CK+R+C H +P CAI E R+ NY Sbjct: 247 PEFYTEPSQVPQLFPELRSQLLIKKCKFRNCMHLNEPDCAISRDWE-------RYSNYKN 299 Query: 332 ILESM 336 L+ M Sbjct: 300 FLQEM 304 >UniRef50_D2AX52 Ribosome-associated GTPase n=3 Tax=Actinomycetales RepID=D2AX52_STRRD Length = 360 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 6/226 (2%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +AAN+D +V+ ++ L ++R L P+IVL K D A V+ + Sbjct: 112 LAANVDTVVLAVSLTTPLDAARLERLLALAWDSGARPLIVLTKAD--LAADAAAVHAETS 169 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTND 238 G +L+ S+ T + L L+G ++ G SG GKS L NALLG + + T + Sbjct: 170 TLAP-GVDILITSAATGQNIDVLTALLSG-TTVLLGSSGAGKSRLGNALLG-DELLATGE 226 Query: 239 ISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCK 298 + G G+HTT L P GG +ID+PG+R L+ + + Q F E C+ Sbjct: 227 VRAQDGKGRHTTVRRELVPLPGGGVLIDTPGLRGISLYD-AADGLEQVFAEIERLAQDCR 285 Query: 299 YRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 + DC HDT+PGCA++ A++ G++ E R NY ++ A +R + Sbjct: 286 FGDCSHDTEPGCAVQAAIQAGELTERRLGNYRKLQRENAWAASRTD 331 >UniRef50_C4DFS4 Predicted GTPase n=2 Tax=Actinomycetales RepID=C4DFS4_9ACTO Length = 363 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 105/222 (47%), Gaps = 27/222 (12%) Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKID-------LLDDEGMAFVNEQMDIYRNI 183 A+ P+ I+R P++VL K D L DD A + Sbjct: 122 ALDPDPDFGRIERLAALAYDSGATPLLVLTKADAVPDPELLADDLSAAMPDAP------- 174 Query: 184 GYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 VL VS+ T GL L E L GR G SG GKS+L+NAL G E++ Sbjct: 175 ---VLTVSAVTGQGLDALAEYLKPGRSLALLGASGAGKSTLVNALAG--AEVMATRGLRA 229 Query: 243 SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP-------EQITQGFVEFHDYLG 295 G G+HTT+ L PHGG +ID+PG+R GL+ P + + + F + Sbjct: 230 DGRGRHTTSHRSLVPVPHGGAIIDTPGLRVVGLFDRRPGDAATPVDGLARAFGDLDALAA 289 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 C++ DC+HDT+PGCA+ A+++G + R EN+ ++ A Sbjct: 290 QCRFNDCRHDTEPGCAVLAAIDDGLLTARRLENWRKLQREQA 331 >UniRef50_B9NLX8 Ribosome small subunit-dependent GTPase A n=2 Tax=Rhodobacteraceae RepID=B9NLX8_9RHOB Length = 359 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/263 (29%), Positives = 132/263 (50%), Gaps = 26/263 (9%) Query: 95 GIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 G V + +R S+L R G IAAN+D + I S+ + +L ++RYL Sbjct: 87 GRVRHLLDRRSLLQRRAAGTGATAQLIAANVDVLFIASSCNADFNLPRLERYLALAHQAG 146 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKP--LEEALT---- 206 P+IVL K D+ DD ++V + G ++ + L P +E+AL Sbjct: 147 CYPVIVLTKSDMCDDT-ESYVQQA-------GALAPFLTVLAINALDPADIEQALAWCPK 198 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 G+ G SGVGK++L N + G +++ T+ I ++ G+HTTTA L+ +GG +ID Sbjct: 199 GQTGALVGSSGVGKTTLANGMTG--QDLATSGIREDDARGRHTTTARALHRMRNGGWLID 256 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG+R L + + + F + + C++ DC+HDT+P CA++ A+ G + R Sbjct: 257 TPGMRALRLLDAR-DGVDEVFSDISELSLSCRFSDCQHDTEPDCAVQAAISNGVLDPARL 315 Query: 327 ENYHRILE-------SMAQVKTR 342 E + ++ S+AQ + R Sbjct: 316 ERWRKLRREDQRNSASVAQARAR 338 >UniRef50_B9HDG9 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HDG9_POPTR Length = 394 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 147/291 (50%), Gaps = 31/291 (10%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ R ++ GD+VV + + V+ +G++E V +R+S D + P Sbjct: 89 VVRAVLKKIKRRVLVGDKVV----VGSIDWVDRRGMIENVFQRSS--------DILDPPV 136 Query: 121 ANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN+D+++++ ++ P+L ++ R+L+ E+ I + LNK +L+D + ++ + ++ Sbjct: 137 ANVDRLLVLFSVEQPQLESFVLTRFLIEAESTGIPITLALNKAELVDQQVLSDWDTRL-- 194 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDI 239 R+ GY L S ++ GL L L + ++ G SGVGKSSL+NAL + Sbjct: 195 -RSWGYEPLFCSVDSKMGLDSLASVLRDQTTVIVGPSGVGKSSLINALRNKPNSQRVGKV 253 Query: 240 SDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG---- 295 S SG G+HTT L GG + D+PG + L + + + Q F E LG Sbjct: 254 STRSGRGKHTTRNVSLLPLGGGGYLADTPGFSQPSLLKVTKQSLAQYFPEIRKMLGDNEQ 313 Query: 296 -LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNF 345 C + DC H +PGC ++ E R+ Y ++L+ +++ R+ F Sbjct: 314 AKCAFNDCLHVGEPGCIVKGDWE-------RYPLYFQLLD---EIRIREEF 354 >UniRef50_A3V5J3 Putative uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V5J3_9RHOB Length = 345 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 83/245 (33%), Positives = 125/245 (51%), Gaps = 13/245 (5%) Query: 100 VHERTSVLTR-PDFYDGVKP-IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPII 157 V +R + L+R +++ G K IAAN+D + I ++ + + ++RYL + P+I Sbjct: 81 VLDRQTELSRGTEYHTGDKQLIAANLDTLFITTSCNADFNPARLERYLALAHDAGVRPVI 140 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL---TGRISIFAG 214 VL K D DD F ++ + R++ VL V++ D P A G+ FAG Sbjct: 141 VLTKADQTDDPA-GFADQARALGRDLA--VLAVNAKAAD--LPAHFAPWCGQGQTIAFAG 195 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGK+++ NAL G T DI D+ G+HTTT L+ GG +ID+PG+R G Sbjct: 196 TSGVGKTTIANALTG--GNAATRDIRDDDARGRHTTTGRSLHRMLAGGWLIDTPGMRGLG 253 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L + I F E D CK+RDC H+ +PGCA++ AV G I R + ++ Sbjct: 254 LAEVG-FGIDATFPEISDLAAQCKFRDCAHEREPGCAVQAAVAAGAIDPDRLARFKKLKS 312 Query: 335 SMAQV 339 Q Sbjct: 313 ENTQA 317 >UniRef50_D2B3W4 Ribosome-associated GTPase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3W4_STRRD Length = 372 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 8/230 (3%) Query: 119 IAANIDQIVIVSAIL---PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNE 175 +AAN+D + + L L I+R L P++++ K DL+ EG+ F+ Sbjct: 121 LAANVDVVFVAEPALHATDTADLGRIERLLALAWESGGLPVVLVTKSDLVG-EGLDFLMG 179 Query: 176 QMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEI 234 ++ G V V S T +G++ + L GR ++ G SG GKS+L+NAL G + Sbjct: 180 EVAAAAP-GVDVHPVCSVTGEGVEIVRGYLEGRRTAVVLGASGAGKSTLVNALAG-GNVM 237 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T + G G+HTT L GG +ID+PG+R GL+ + E + F + D Sbjct: 238 ETQQVRAGDGRGRHTTVHRELIPLKDGGLIIDTPGIRRVGLYDMG-EGVDMVFSDIEDLA 296 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 C++ DC HD++PGCA+ A+E+G + E R E+++++ A + +R + Sbjct: 297 ERCRFADCGHDSEPGCAVIAAIEDGTLPERRLESWNKLQREAAWMASRSD 346 >UniRef50_B5Y7I4 Ribosome small subunit-dependent GTPase A n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7I4_COPPD Length = 289 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 127/239 (53%), Gaps = 15/239 (6%) Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPI 156 E ERT+ R +++ ++P AN+D +V V + P+ + +D L TLQ P+ Sbjct: 55 EVSVERTT--GRKNYF--LRPPVANLDLLVYVHSFKNPQCDVRYLDLTL-GLATLQNIPV 109 Query: 157 IVL-NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +VL +K DLL DE + +Y ++GY V++ S + L L+E L G+ +F+G Sbjct: 110 LVLFHKADLLRDED---IQPWTSLYTSLGYDVMVTSVYYD--LSALKERLRGKTVLFSGP 164 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 +GVGKSSL+ AL + DIS G G+HTT+ L V+D+PG + Sbjct: 165 TGVGKSSLVKALWK-DASVRVGDIS-KVGRGKHTTSWVELLPL-DDTYVVDAPGFSLLEM 221 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 + P I + F E C + DC H +P CA++EAV++G IAE+R+ +Y L+ Sbjct: 222 PAMNPWDIQRMFPEIETTAKGCFFSDCLHLKEPSCAVKEAVKKGLIAESRYNSYLYFLD 280 >UniRef50_Q30WI2 GTPase n=2 Tax=Deltaproteobacteria RepID=Q30WI2_DESDG Length = 354 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 6/218 (2%) Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNE 175 ++ +AANID + IV++ + + + I+RYL + P++V+ K DL+ D F+ Sbjct: 104 IQALAANIDTLFIVTSCNDDFNPSRIERYLTLAMGSGVTPVLVITKADLVADAD-EFIGR 162 Query: 176 QMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEI 234 I +++ V ++++ LE G+ AG SGVGKS+L+N L G + Sbjct: 163 AKAIRQDLD--VCVLNALDAGSAAVLENWCGKGQTLALAGSSGVGKSTLVNTLQGEHIQS 220 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T I ++ G+HTTT L+ P G +ID+PG+RE L + + + F + Sbjct: 221 -TGAIREHDARGRHTTTGRSLHMLPSGAVLIDTPGIRELQLADV-GQGLASAFDDIEQLA 278 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 C++ DC HD + GCA++ AV G++ R ENY +I Sbjct: 279 AGCRFNDCTHDHESGCAVQAAVLSGELELRRLENYRKI 316 >UniRef50_D2NSB1 Predicted GTPase n=5 Tax=Actinomycetales RepID=D2NSB1_9MICC Length = 375 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 38/250 (15%) Query: 102 ERTSVLTRP--DFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIV 158 ERTS+L R D + + AN Q+VIV +A PE IDR +VA IEPI+ Sbjct: 108 ERTSILRRSADDTDPSERVVVANAQQLVIVVAAANPEPRTGFIDRAVVAAFDAGIEPILC 167 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA-------------- 204 + K D+ + +D Y G ++++ SS DGL P +E Sbjct: 168 ITKTDVR------YPQNLLDYYAASGLKIVLSSS--SDGLAPSQEGAAGLESAPVQELLQ 219 Query: 205 -LTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAA-RLYHFPHGG 262 L G++S+ G SGVGKS+L+NAL G ++ T ++ +G G+HT+++A L G Sbjct: 220 ELLGQVSVLLGHSGVGKSTLVNALTGSERA--TGHVNAVTGRGRHTSSSALALRPVNANG 277 Query: 263 D-------VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD-PGCAIRE 314 D +ID+PG+R FGL H+ PE + + FV+ C + C H P C + Sbjct: 278 DPMEPGTWIIDTPGIRSFGLAHVPPETVVEAFVDLAPGAADCP-KACTHAAQAPECGLEA 336 Query: 315 AVEEGKIAET 324 V G E+ Sbjct: 337 YVAAGHAGES 346 >UniRef50_A4E9Q8 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9Q8_9ACTN Length = 317 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 88/275 (32%), Positives = 134/275 (48%), Gaps = 28/275 (10%) Query: 75 TGDRVVWR--PGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV-----KPIAANIDQIV 127 GDRV R PG G++E V R + R + G + + +N+D ++ Sbjct: 45 VGDRVAVRRAPGHD-------MGVIECVLPRRTSFER---WRGRARGERQVLCSNVDSVL 94 Query: 128 IVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD-IYRNIG- 184 IV A+ E+ L+ + R LV EP++VL K D D E + +D + R +G Sbjct: 95 IVQALGAGEVLLDRVARSLVLALDCDAEPVVVLTKADRCDAEEL---ERDLDRVRRLVGP 151 Query: 185 -YRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 RV++ SS GL + + G ++ G+SG GKS+LLNALLG + T + + Sbjct: 152 DVRVIVTSSAEGRGLDEVRICVPAGSCAMILGESGAGKSTLLNALLG-HDTLATGGVRER 210 Query: 243 SGLGQHTTTAARLYHFPHGGDVI-DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRD 301 G+HTT A + P VI D+PG+R L E + + F E + C++ D Sbjct: 211 DDQGRHTTVARVMVALPGDAGVIADAPGLRSLPLVGHE-RGLARAFPEIVEASRACRFGD 269 Query: 302 CKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 C H +PGCA+REA + G+I R E + + SM Sbjct: 270 CTHTHEPGCAVREAEDAGQIDSLRLETFQSLASSM 304 >UniRef50_A4XCG5 GTPase EngC n=1 Tax=Salinispora tropica CNB-440 RepID=A4XCG5_SALTO Length = 350 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 19/291 (6%) Query: 56 SADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPD-FYD 114 S +G +R + +L GD VV G+ V + R S+L R D Sbjct: 53 STEGGTRHFPVRSSAPALAVGDWVVVDDGR-----------VLDLLPRASLLRRRDPSTG 101 Query: 115 GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 G + IAAN+D + IV + + + R+ P+++L+K DL++ Sbjct: 102 GGQLIAANVDVVGIVCGLDRPVVHGRLQRFTSLAWDAGASPLVILSKADLVNSTANI--- 158 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 E + ++ G ++ V++ T G+ L R + G+SG GKS+LLNAL G +E+ Sbjct: 159 ENSLLQQHPGVDIVSVAATTATGVFDLLGRCAKRTLVLVGESGAGKSTLLNALAG--REL 216 Query: 235 -LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDY 293 T + + G+HTTTA +L+ +ID+PG+RE G+ H + + GF + + Sbjct: 217 GATGKVRRSDAKGRHTTTARQLFALEGDCCLIDTPGMREVGV-HADVATVDAGFDDIAEL 275 Query: 294 LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 C++ DC H +PGC + AV +G+++E R ++++ A + R + Sbjct: 276 AVGCRFSDCGHANEPGCEVLAAVADGRLSEQRVRAWNQLCREAAWAELRAD 326 >UniRef50_B1V9R1 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Acholeplasmataceae RepID=RSGA_PHYAS Length = 310 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 77/249 (30%), Positives = 138/249 (55%), Gaps = 13/249 (5%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQ 152 K ++ A+ R + L RP+ ANIDQ+++V S + P ++D++L+ + + Sbjct: 67 KYLIYAILPRKNELKRPN--------IANIDQVLLVFSLVKPHFQTLLLDKFLLILQQHK 118 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 ++ I+V +KIDL++ E + + + M+ Y Y V S Q G+ L+ +I++ Sbjct: 119 LDVILVFSKIDLIEKEELEEIQQNMNYYFPF-YTCYYVDSKQQIGIGVLKNIFEQKITVL 177 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AGQ+GVGKS+LL AL+ + T +IS++ G G+HTT A+LY F + G + D+PG + Sbjct: 178 AGQTGVGKSTLLKALIP-DANLKTQEISESLGRGKHTTKNAQLYLF-NNGFIADTPGFSK 235 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKY-RDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 L + + + +F Y+ C + +C H + C ++EA+ +GKI +R+ NY Sbjct: 236 LDLGGFSYQNLKNFYPDFLKYVDNCYFGTNCLHLQETQCGVKEALTQGKIIPSRYSNYCY 295 Query: 332 ILESMAQVK 340 +E + + K Sbjct: 296 FMEEIKKEK 304 >UniRef50_Q2FKR3 GTPase EngC n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKR3_METHJ Length = 204 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 7/154 (4%) Query: 187 VLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLG--LQKEILTNDISDNS 243 V+ +S+ GL+ L L G IF G SGVGKS+L+N L G +QK T DI ++ Sbjct: 17 VIPISALNNTGLEHLNPFLAPGNTVIFLGSSGVGKSTLINTLNGTSVQK---TEDIREDD 73 Query: 244 GLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 G +HTT L P G +ID+PG+RE +W E E + F + + C++ DC Sbjct: 74 GKERHTTMVRHLVSLPSGSCLIDTPGMREIRIWTAE-ESVQDAFEDIAKFSQRCRFSDCA 132 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 H+ +PGCA+R+AVEEG+ + R E Y ++L+ A Sbjct: 133 HEQEPGCAVRKAVEEGERSAGRLERYKKLLKEAA 166 >UniRef50_A7BSI5 GTPase EngC n=1 Tax=Beggiatoa sp. PS RepID=A7BSI5_9GAMM Length = 221 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 6/187 (3%) Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQM-DIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRIS 210 I P+++L+K DLL +A Q+ I +I +V+ S+ G+ ++ L +G Sbjct: 7 IHPVVLLSKSDLLAPTELAEKITQIHSIMPDI--QVIAFSNTNNFGIDSVKNLLKSGETF 64 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGK++LLN LLG + T ++S+ G+HTTT +L H +G +ID PG+ Sbjct: 65 CLLGSSGVGKTTLLNNLLG-EALFETQNVSEKESKGKHTTTRRQLIHLENGAMIIDVPGM 123 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE G +E I++ F E + C+Y DC H + GCA+ +A++EG I+E R++NY Sbjct: 124 RELGNIGIES-GISETFSEIIELSNQCRYADCSHTQEKGCAVLDALKEGVISEERYQNYL 182 Query: 331 RILESMA 337 ++L+ A Sbjct: 183 KMLKESA 189 >UniRef50_A0L4L3 GTPase EngC n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4L3_MAGSM Length = 351 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 119/235 (50%), Gaps = 10/235 (4%) Query: 102 ERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 ER S L+R G + +AANID + +VS+ + + + ++RYL ++P+++L Sbjct: 87 ERLSHLSRKAAGSGQQTQHMAANIDTLFVVSSCNRDFNPSRLERYLALAFAGNVQPVVLL 146 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGV 218 K DL+D E F + ++R G + + + D L + G F G SGV Sbjct: 147 TKADLVD-EPEPFCRQVESLHR--GVVAIALDARHPDLHHQLGPWIGPGESVAFLGSSGV 203 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKS+L+NALL QK + T + G+HTTTA ++H G ++D+PG+RE L Sbjct: 204 GKSTLINALLD-QKSMATQAARADDDRGRHTTTARAMFHMKSGAWLLDTPGMRELRLG-- 260 Query: 279 EPEQITQG-FVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 E Q Q F + C+YRDC H+ GCA+ AV + R NY ++ Sbjct: 261 ESNQGLQTLFSDIEALAQACQYRDCDHERTSGCAVLAAVASDTLDARRVRNYLKL 315 >UniRef50_B8HA01 GTPase EngC n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HA01_ARTCA Length = 340 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 98/328 (29%), Positives = 156/328 (47%), Gaps = 35/328 (10%) Query: 29 PDYDDNLFGEPDEGI--VISRFGMHADVESADGDVHRCNIRRTI-------RSLVTGDRV 79 PD +++ + + I V+ G HA+V SA G N+ T+ + V GD V Sbjct: 14 PDDEESFLEQTEAQIARVVIVHGGHAEVMSASGTE---NVTETVLFSSTLDTTPVAGDWV 70 Query: 80 VWRPGKPAAEGVNVKGIVEAVHERTSVLTRPD-FYDGVKPIAANIDQIVIVSAILPELSL 138 G IVE RTS + RPD + + +AANID I++V A P SL Sbjct: 71 AVLQGT----------IVEVAPRRTS-MARPDPGGNRTQVLAANIDLILVVVAADPIPSL 119 Query: 139 NIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI--GYRVLMVSSHTQD 196 N I+R V P++VL K D D ++E ++ + G ++ S Sbjct: 120 NAIERMQVMAWDSGATPVLVLTKADQCSD-----LDEVLEHVAPVSSGLETIVTSITDGR 174 Query: 197 GLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 GL L + + + G SG GK+SLLNAL G + T + + G G+HTTT RL+ Sbjct: 175 GLSLLHDRVENLTTTMLGASGAGKTSLLNALHG--TDAATAPVRRD-GQGRHTTTTRRLF 231 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAV 316 P GG ++D PG+R L E I+ F + + C++ DC H+ GCA+ AV Sbjct: 232 PMPWGGVMLDIPGIRSLAL-QAGQEGISDTFADISELSYHCRFSDCLHERTAGCAVAAAV 290 Query: 317 EEGKIAETRFENYHRILESMAQVKTRKN 344 +G+++ R +++ + ++ + R++ Sbjct: 291 ADGRLSARRLDSWLAVQRELSFQERRRD 318 >UniRef50_Q73J49 GTPase YjeQ, putative n=1 Tax=Treponema denticola RepID=Q73J49_TREDE Length = 364 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 77/246 (31%), Positives = 135/246 (54%), Gaps = 15/246 (6%) Query: 95 GIVEAVHERTSVLTRPDFYDGV---KPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 +++ ++ER + ++R D G+ + IAANID I ++ + +LN + RY+ A + Sbjct: 78 ALIDFLYERKNKISRTDPRLGIELEQIIAANIDTAFICMSLNKDSNLNRLARYVFALQ-- 135 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRIS 210 IE +++L K DL + A N IY ++ +V +S D L+ ++ G+ S Sbjct: 136 NIETVLLLTKADLSETREDA-ENLIKKIYPHL--KVYCISIFEPDSLENIKYYFKKGKTS 192 Query: 211 IFAGQSGVGKSSLLNALLGLQKEIL-TNDISDNSGLGQHTTTAARLYHFPH-GGDVIDSP 268 + G SGVGKSSL+N+L G KEIL T++I+ G HTTT ++ G ++D+P Sbjct: 193 VLLGSSGVGKSSLINSLTG--KEILRTSEINKKIDKGVHTTTNRQIISLGEDAGVIMDTP 250 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G++ G+W + + F + + C + DC H + GCA+ EA++ G + + R+E Sbjct: 251 GMKVLGIWDSDSGE--NSFADITELKSKCLFSDCTHTCEKGCAVLEALKTGLLDKNRYEL 308 Query: 329 YHRILE 334 Y ++L+ Sbjct: 309 YLQLLK 314 >UniRef50_C8W7M5 GTPase EngC n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7M5_ATOPD Length = 394 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 79/270 (29%), Positives = 135/270 (50%), Gaps = 34/270 (12%) Query: 95 GIVEAVHERTSVLTRPDFYDGVK----PIAANIDQIVIVSAILPE-LSLNIIDRYLVACE 149 GI+EA+ R + + R + G + +AAN+D +++V A+ E +S++ I R V + Sbjct: 118 GIIEAILPRETDIAR--WKGGARGQKQTLAANVDLVLVVQALDGETISVDRIVRSAVISK 175 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ------DGLKPLEE 203 +VL K D+ E +A E I +G V +V++ ++ D L L + Sbjct: 176 DCGAACAVVLTKSDVAGPELLA--QEISSITAALGSTVKIVATASKLEGEKTDVLADLAQ 233 Query: 204 ALT-----------------GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLG 246 G I+I G+SG GKS+LLNALLG + + T ++ ++ G Sbjct: 234 TAQDLGAAWGIDAVRNLVPYGSIAIVLGESGAGKSTLLNALLG-HEALETGEVRESDKAG 292 Query: 247 QHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDT 306 +HTT A R+ P G ++D PG+R + E + + F + CK+RDC H Sbjct: 293 RHTTVARRMVALPEAGVIVDEPGLRSLPIVGHE-RGLQKVFPHISEAAQTCKFRDCTHTH 351 Query: 307 DPGCAIREAVEEGKIAETRFENYHRILESM 336 +PGC++++A+ EG+I E + + Y + + M Sbjct: 352 EPGCSVQDALHEGQITEPQLKAYLSLAKEM 381 >UniRef50_Q98PN8 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Mycoplasma pulmonis RepID=RSGA_MYCPU Length = 272 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 37/276 (13%) Query: 65 NIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANID 124 N+R + V GD VV+ + + R ++L RP ANID Sbjct: 29 NLRNLKLNPVVGDLVVFDES------------LTKIEPRKNILIRPK--------VANID 68 Query: 125 Q-IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI-YRN 182 Q I+++S P+ S ++D++L E +I+ +I+ K DL N + DI Y Sbjct: 69 QAIIVISLDQPKFSSFLLDKFLSIIEFQKIKVVIIFTKADL---------NTKEDIGYYL 119 Query: 183 IGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 Y+ + S ++ K L + +IS+ GQSGVGK+++LN + T +IS Sbjct: 120 KTYQSYLTSLDDENSYKKLNDIFEKKISVLVGQSGVGKTTILNKV--SLNNFFTQNISKA 177 Query: 243 SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDC 302 G G+H+T ++ F + G +ID+PG + + + +++ F F Y CKYR C Sbjct: 178 LGRGKHSTRVVKMIDF-NNGQIIDTPGFSSIEI-QMSQKDLSKSFESFDKYSQRCKYRHC 235 Query: 303 KHDTD--PGCAIREAVEEGKIAETRFENYHRILESM 336 H + C I++ V+ +I R+ NY ++L+ + Sbjct: 236 LHQNERLEDCNIKQLVQSQEIPLFRYNNYLKLLDEV 271 >UniRef50_C1YSI8 Predicted GTPase n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YSI8_NOCDA Length = 387 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 131/244 (53%), Gaps = 16/244 (6%) Query: 96 IVEAVHERTSVLTRP----DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 +VEAV ER+ L R D +D V +AANID +++ A ++ ++R+L Sbjct: 96 VVEAVLERSGSLVRQGVARDSHDQV--LAANIDGVLVCEAADQGPNVGRLERFLSLAWAS 153 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI--GYRVLMVSSHTQDGLKPLEEA-LTGR 208 P++ + K +L D + E +++ ++ G V VS+HT G++ L L G Sbjct: 154 GATPVVAVTKAELAGDR----LPEVLELVGSVTAGADVHTVSAHTGLGVEELAARFLPGT 209 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 + G SG GKSSL+NA+ G +K + T +I + +HTTT +L P G V+D P Sbjct: 210 TWVLLGTSGAGKSSLVNAVAG-RKLMDTGEIRHDRRG-RHTTTRRQLLQLPGGALVLDIP 267 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 GVR + + + + F + D C++RDC+H ++PGCA+ AV+EG++ R E Sbjct: 268 GVRRIDV-PGDARGVDRTFADVSDLAEQCRFRDCRHGSEPGCAVTAAVDEGELDARRLER 326 Query: 329 YHRI 332 ++R+ Sbjct: 327 WNRL 330 >UniRef50_D0LVG1 Ribosome small subunit-dependent GTPase A n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LVG1_HALO1 Length = 341 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 88/281 (31%), Positives = 136/281 (48%), Gaps = 18/281 (6%) Query: 59 GDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKP 118 G + R R R GD V +P A G + +V RT L + G +P Sbjct: 59 GGMLRAAKRERQRRPAVGDWVAVQP----AVGDGMGTVVHLFDRRTRFLRQAA---GRRP 111 Query: 119 I----AANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLL--DDEGMAF 172 + AANID IV+A + + ++RYL ++VLNK D +DE A Sbjct: 112 VVQVVAANIDAAFIVTAFGHDFNPRRLERYLTCVGESGARAVLVLNKRDQAADEDEIAAR 171 Query: 173 VNEQMDIYRNIGYRVLMVSSHTQDGLKPLE-EALTGRISIFAGQSGVGKSSLLNALLGLQ 231 + E + G VL S+ GL L E + + G SGVGKSSL+N L+ + Sbjct: 172 IAEVRAV--AAGAPVLCTSATEGRGLDELRAEIASHETAALVGSSGVGKSSLVNWLMAAE 229 Query: 232 KEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFH 291 + T + + G G+HTTT L P GG +ID+PG+RE L+ + + + F + Sbjct: 230 VQ-RTAPVRERDGRGRHTTTHRELMLLPGGGLLIDTPGMRELQLFS-AADALREAFADIA 287 Query: 292 DYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 C++RDC+H +PGC +R+A+ G++A R+E + ++ Sbjct: 288 SLSESCRFRDCRHRDEPGCEVRQALHRGRLARERYEGFCKL 328 >UniRef50_Q46I43 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Prochlorococcus marinus RepID=RSGA_PROMT Length = 312 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 26/250 (10%) Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVI-VSAILPELSLNIIDRYLVACET 150 N + +V V R S L RP AN+ + I +SA P + R+L+ E Sbjct: 74 NKRAVVSDVEPRQSFLKRPA--------VANVTLVSICISADEPLFDMEQTSRFLLTAEC 125 Query: 151 LQIEPIIVLNKIDLL-DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGR 208 IEP+I+L KIDL+ ++ + ++N+ +++ GY + VS H G+ L E L + Sbjct: 126 ANIEPLIILTKIDLITKNDLILYINK----FKSWGYDCIPVSIHNSQGIDSLIERLRKTK 181 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 +++ AG SGVGK+SL+N L+ + T+ +S G HTT L+ +G + D+P Sbjct: 182 LTVLAGPSGVGKTSLINHLIP-TVSLPTSSVSKKLKRGTHTTRHVELFAIGNGSLLADTP 240 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYL--GLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 G + EP F EF L CK+R+C H +PGC I + +E R+ Sbjct: 241 GFNRPEIV-CEPSDFAFLFPEFRTQLSNSQCKFRNCLHRDEPGCVIDKDLE-------RY 292 Query: 327 ENYHRILESM 336 Y + LE M Sbjct: 293 PFYRQNLEEM 302 >UniRef50_Q114R1 Ribosome small subunit-dependent GTPase A n=2 Tax=Oscillatoriales RepID=Q114R1_TRIEI Length = 374 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 34/283 (12%) Query: 62 HRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAA 121 R +++ + ++ GDRV+ + V +G + V R + L RP PIA Sbjct: 53 RRSRLKKIGQKVMVGDRVIIE----DPDWVGGRGAIAEVLPRETELDRP-------PIA- 100 Query: 122 NIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 N++Q+++V A+ P L + R+L+ E+ +E + L+K DL+ M Q+ + Sbjct: 101 NVNQVMLVFALAEPNLDPVALTRFLLKAESTGLEICLCLSKCDLVSATKMEEWRSQISEW 160 Query: 181 RNIGYRVLMVSSHT-------QDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKE 233 GY +S T +DG L E L +I++ +G SGVGKSSL+N L+ Sbjct: 161 ---GYEPFFISLKTDVGLGVVKDGSNSLWEKLRNKITVVSGPSGVGKSSLINYLIP-DVN 216 Query: 234 ILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDY 293 + + +S G+HTT L+ P+GG + D+PG + L E ++ F E Y Sbjct: 217 LRVSAVSGKLSRGRHTTRHVELFELPNGGLLADTPGFNQPQL-ECEAIELAHLFPEARKY 275 Query: 294 L--GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L G C++ DC H +P C +R R+E Y LE Sbjct: 276 LADGSCQFSDCLHRDEPNCVVRGEW-------NRYEYYLMFLE 311 >UniRef50_Q98JM4 Putative ribosome biogenesis GTPase rsgA n=14 Tax=Alphaproteobacteria RepID=RSGA_RHILO Length = 346 Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 15/225 (6%) Query: 115 GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 G + AAN+D + IV++ + ++ ++RYL P+I+L K D +D A+ Sbjct: 103 GPQLAAANVDTLFIVTSCNADFNIARLERYLALANEAGTTPVILLTKADTAED-AEAYRK 161 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLG--LQ 231 + + R + V+ ++ L G+ G SGVGKS+L+N L G Q Sbjct: 162 QAAALQRELA--VVTLNPRIPGAASALAAWCGAGQTVALIGSSGVGKSTLVNTLAGSAQQ 219 Query: 232 KEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQG----F 287 T I ++ G+HTTTA L+ GG VID+PG+R L+ + G F Sbjct: 220 SPQQTGAIREHDAKGRHTTTARSLHAIAGGGWVIDTPGMRT-----LQVSDVGYGIDTLF 274 Query: 288 VEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 E + LCK+RDC H +PGCA++ A++ G + R + ++ Sbjct: 275 AEITELAPLCKFRDCTHVHEPGCAVQAALKAGTLDPERLARWRKL 319 >UniRef50_B9RMG0 GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RMG0_RICCO Length = 500 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 145/312 (46%), Gaps = 52/312 (16%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ R ++ GD+VV + + V+ +G++E V +R++ + + P Sbjct: 138 VVRAVLKKIRRRVLVGDKVV----VGSIDWVDRRGMIENVFQRSTEI--------LDPPV 185 Query: 121 ANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN+D ++++ ++ P++ + R+LV E+ I + LNK +L+D+E + ++ Sbjct: 186 ANVDHLLVLFSMDQPKIEPFALTRFLVEAESTGIPLTLALNKSELVDEETLIAWKSRL-- 243 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL------------ 227 R+ GY L S ++ GL L L + ++ G SGVGKSSL+NAL Sbjct: 244 -RSWGYEPLFCSVESKLGLDSLAYILREQTTVIVGPSGVGKSSLINALRNKPRACDVAEN 302 Query: 228 -------LGLQ--KEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 LG + +E ++S SG G+HTT L GG + D+PG + L + Sbjct: 303 DNWFDPMLGSKWFEEQRVGEVSTRSGRGKHTTRNVSLLPLSAGGYLADTPGFNQPSLLKV 362 Query: 279 EPEQITQGFVEFHDYL-----GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + + + F E L C + DC H +PGC I +E Y Sbjct: 363 TKQSLAETFPEIQKMLSSGGPAKCSFNDCLHLGEPGC----------IVNGDWERYSFYF 412 Query: 334 ESMAQVKTRKNF 345 + + +++ R+ F Sbjct: 413 QLLDEIRIREEF 424 >UniRef50_P59945 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Mycoplasma gallisepticum RepID=RSGA_MYCGA Length = 274 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 30/295 (10%) Query: 50 MHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEG-----VNVKGIVEAVHERT 104 M A + S + + C + ++ L R W+ K +N +G + + ER Sbjct: 1 MIARILSINANDLFCEVNHELKKLHAPGR--WKHQKINLAPNDLLELNDQGEIIKLIERK 58 Query: 105 SVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACET-LQIEPIIVLNKI 162 + L RP AN+D +V+V +I P+L+L + +++V E+ L +P+IV +K+ Sbjct: 59 NYLNRPK--------VANLDHVVLVFSIKDPQLNLKQLFKFMVYFESQLGFKPLIVFSKL 110 Query: 163 DLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSS 222 DL D+ + ++ I Y+V ++ D L+ L +++IF G SGVGKS+ Sbjct: 111 DLDHDQNE--FKKIVEALEQINYQVFKLNE--PDDFLRLKNLLFNKVTIFCGHSGVGKST 166 Query: 223 LLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQ 282 LL L +I T +S G++TTTA +LY F G ++DSPG + L +L +Q Sbjct: 167 LLKRLDN-SLDIWTQAVSAKLKRGKNTTTATKLYKFLDGY-LVDSPGFSIYDL-NLTKQQ 223 Query: 283 ITQGFVEFHDYLGLCKYRDCKH-DTDPGCAIREAVEEGKIAETRFENYHRILESM 336 ++ G +EF Y CK+ DC H + C +++ KI ++ Y +++S+ Sbjct: 224 LSCGLIEFAQYQTKCKFNDCLHLENSADCYLKK-----KINSLIYQIYLSVIKSI 273 >UniRef50_UPI0001C31887 GTPase EngC n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31887 Length = 348 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 16/223 (7%) Query: 119 IAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 +AAN+ ++ +V+ LPE + +R ++ +VL K DL + Sbjct: 109 LAANV-ELALVAEPLPEPNERRAERLAAIAGAGEVPVALVLTKADLD----DDADATALR 163 Query: 179 IYRNIGYR-VLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILT 236 + R++G + VS T DG+ + L G ++ G SG GKS+L+NALLG +++ + Sbjct: 164 LGRDLGLPDAIAVSVRTGDGIGIVRSLLPPGSTAVLLGPSGAGKSTLVNALLGEERQAV- 222 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 D+ + G+HTT L P+GG +ID+PG+RE G+W + F + + Sbjct: 223 GDVRASDKRGRHTTVTRELLSLPNGGLLIDTPGMREVGMWD---GGVDDTFDDVAELAAG 279 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 C++ DC+HD++P CA+R G +A R E + ++ A V Sbjct: 280 CRFADCQHDSEPDCAVR-----GVVAPERLEAWRKLAREQAWV 317 >UniRef50_A2C5M0 Putative ribosome biogenesis GTPase rsgA n=14 Tax=cellular organisms RepID=RSGA_PROM3 Length = 321 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 26/248 (10%) Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 + +V V R S + RP P+A +V ++ P + R+L++ E + Sbjct: 79 RAVVGDVEPRQSWINRP-------PVANVTAVVVALAVKQPCFDADQASRFLLSAEQTGV 131 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RISIF 212 + ++L K DL+ + + +Q+ R GYR + VS T +GL L+ L+ R+++F Sbjct: 132 DVHLILTKRDLITSDQL---EQQLVRLRGWGYRPMAVSVQTGEGLGALKNKLSSTRLAVF 188 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SGVGK+SLLN LL Q + +S G+HTT L+ G V D+PG Sbjct: 189 CGPSGVGKTSLLNQLLP-QLSLRVGAVSGRLQRGRHTTRHVELFRLCEGSLVADTPGFNR 247 Query: 273 FGLWHLEPEQITQGFVEF----HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 L +P ++ F EF DY C++RDC H +PGC + ++ E R+ Sbjct: 248 PEL-PADPRKLAVLFPEFDGQIEDY--PCRFRDCFHRDEPGCGVDKSWE-------RYPI 297 Query: 329 YHRILESM 336 Y R LE M Sbjct: 298 YKRFLEEM 305 >UniRef50_A5CQK8 Putative GTPase n=4 Tax=Actinobacteria (class) RepID=A5CQK8_CLAM3 Length = 358 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 142/291 (48%), Gaps = 28/291 (9%) Query: 13 RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVIS----RFGMHADVESADGDVHRCNIRR 68 RV N + SK++P + D++ EG V++ RFG+ ++ D R Sbjct: 23 RVRPNPKGNKPRSKQRPGHTDSV-----EGRVLTVDRGRFGVLVGEDTPDEHTLIATRAR 77 Query: 69 TI--RSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV-KPIAANIDQ 125 + +++VT DRV EG ++ IV RT + D D V + I AN DQ Sbjct: 78 ELGKKAVVTNDRVDIVGDTSGDEG-SLSRIVRIAPRRTLLRRSADDSDAVERVIVANADQ 136 Query: 126 -IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 +++V+A PE ++DRYLVA I+PI+ + K D+ D A +D Sbjct: 137 MLIVVAAAEPEPRARLVDRYLVAAFDAGIQPILCITKSDVADPAPFAAHFRVLD------ 190 Query: 185 YRVLMVSSHTQD-GLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNS 243 V +V S + D L L L R ++ G SGVGKS+L+NAL+ K T ++ + Sbjct: 191 --VPIVLSRSDDVPLDELRALLVDRTTVAVGHSGVGKSTLVNALVPDAKR-ATGVVNQVT 247 Query: 244 GLGQHTTTAARLYHFPHG----GDVIDSPGVREFGLWHLEPEQITQGFVEF 290 G G+HT+++ G G +ID+PGVR FGL H++P I + F + Sbjct: 248 GRGRHTSSSTVSMRVETGEGGHGWIIDTPGVRSFGLGHVDPANILRSFASY 298 >UniRef50_A8IGD6 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8IGD6_CHLRE Length = 308 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 123/252 (48%), Gaps = 24/252 (9%) Query: 87 AAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYL 145 A + V +G V V R+S LT P AN++ ++V A+ P + R+L Sbjct: 27 AVDWVAGRGAVSEVLPRSSRLT--------DPAVANVEHALLVFALDTPPFEEQQVSRFL 78 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 VA E + +VLNK DL+ E +A + + GY +++S T +G++ + L Sbjct: 79 VAYEAAGVSFSLVLNKADLVAPEVLA-----GRLAQAWGYEPVVLSCETGEGVEQVAARL 133 Query: 206 TGRISIFAGQSGVGKSSLLNAL-LGLQKEILTNDISDNS-GLGQHTTTAARLYHFPHGGD 263 + R+S+ AG SG GKSSL+N L G + L + G G HTTT+ L GG Sbjct: 134 SDRVSVVAGPSGAGKSSLINLLRRGRHRPDLQAAPGTAAMGRGMHTTTSISLLRLLGGGW 193 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLG--LCKYRDCKHDTDPGCAIREAVEEGKI 321 + D+PG + L + Q+ F E D +G C++ DC H +PGCA+R A E Sbjct: 194 LADTPGFGQPTLDDIASPQLAACFPEISDLVGEQPCRFSDCLHVAEPGCAVRGAGLE--- 250 Query: 322 AETRFENYHRIL 333 R+ Y R L Sbjct: 251 ---RYAFYLRFL 259 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A6TH78 Putative ribosome biogenesis GTPase rsgA n=304 T... 478 e-133 UniRef50_C9PQI0 Putative uncharacterized protein n=1 Tax=Pasteur... 427 e-118 UniRef50_A8FRC7 Ribosome small subunit-dependent GTPase A n=9 Ta... 419 e-116 UniRef50_Q0VMD9 Putative ribosome biogenesis GTPase rsgA n=40 Ta... 389 e-106 UniRef50_Q21H92 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 386 e-106 UniRef50_C5BRI8 Ribosome small subunit-dependent GTPase A n=1 Ta... 381 e-104 UniRef50_Q5ZRX8 EngC GTPase n=6 Tax=Legionella RepID=Q5ZRX8_LEGPH 361 2e-98 UniRef50_D1KB75 GTPase n=1 Tax=uncultured SUP05 cluster bacteriu... 356 6e-97 UniRef50_B7H060 Ribosome small subunit-dependent GTPase A n=17 T... 354 2e-96 UniRef50_A4J589 Ribosome small subunit-dependent GTPase A n=3 Ta... 352 1e-95 UniRef50_Q31HZ7 Ribosome small subunit-dependent GTPase A n=1 Ta... 350 4e-95 UniRef50_C5D8S1 Putative ribosome biogenesis GTPase rsgA n=6 Tax... 349 8e-95 UniRef50_Q0A8I5 Ribosome small subunit-dependent GTPase A n=1 Ta... 348 1e-94 UniRef50_C9MMH3 Ribosome small subunit-dependent GTPase A n=7 Ta... 346 6e-94 UniRef50_A0LCF1 Ribosome small subunit-dependent GTPase A n=1 Ta... 345 2e-93 UniRef50_C7R8R7 Sigma 54 interacting domain protein n=1 Tax=Kang... 344 3e-93 UniRef50_A0Z0P9 Ribosome-associated GTPase n=1 Tax=marine gamma ... 339 1e-91 UniRef50_C5S7F8 Ribosome small subunit-dependent GTPase A n=1 Ta... 337 5e-91 UniRef50_B0NH56 Putative uncharacterized protein n=1 Tax=Clostri... 336 6e-91 UniRef50_A7Z4J8 Putative ribosome biogenesis GTPase rsgA n=31 Ta... 334 2e-90 UniRef50_A1AWN3 Ribosome small subunit-dependent GTPase A n=2 Ta... 334 4e-90 UniRef50_A1HMW6 Ribosome small subunit-dependent GTPase A n=1 Ta... 333 5e-90 UniRef50_C0YJK5 GTP-binding protein n=1 Tax=Chryseobacterium gle... 333 7e-90 UniRef50_B1YIP8 Ribosome small subunit-dependent GTPase A n=2 Ta... 332 8e-90 UniRef50_B8GPJ8 Ribosome-associated GTPase n=1 Tax=Thioalkalivib... 332 1e-89 UniRef50_C1ABL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 330 4e-89 UniRef50_A6TRW0 Putative ribosome biogenesis GTPase rsgA n=15 Ta... 329 9e-89 UniRef50_Q60BE0 Putative uncharacterized protein n=1 Tax=Methylo... 328 2e-88 UniRef50_A5EV96 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 327 5e-88 UniRef50_C9KJ38 Ribosome small subunit-dependent GTPase A n=1 Ta... 327 5e-88 UniRef50_Q8R9T7 Putative ribosome biogenesis GTPase rsgA n=16 Ta... 327 5e-88 UniRef50_Q3AC25 Putative ribosome biogenesis GTPase rsgA n=9 Tax... 326 5e-88 UniRef50_A8FD43 Putative ribosome biogenesis GTPase rsgA n=131 T... 326 5e-88 UniRef50_B5JX14 Ribosome small subunit-dependent GTPase A n=1 Ta... 326 7e-88 UniRef50_A5WDM1 Ribosome small subunit-dependent GTPase A n=4 Ta... 326 1e-87 UniRef50_C9R7Y8 Ribosome small subunit-dependent GTPase A n=1 Ta... 325 1e-87 UniRef50_A6GW90 Putative ribosome biogenesis GTPase rsgA n=25 Ta... 325 2e-87 UniRef50_C4ZEV1 Putative ribosome biogenesis GTPase rsgA n=12 Ta... 325 2e-87 UniRef50_Q11RI7 Putative ribosome biogenesis GTPase rsgA n=3 Tax... 325 2e-87 UniRef50_B8FYJ7 Ribosome small subunit-dependent GTPase A n=17 T... 324 3e-87 UniRef50_B8CXT2 Ribosome small subunit-dependent GTPase A n=2 Ta... 323 5e-87 UniRef50_Q71YJ7 Putative ribosome biogenesis GTPase rsgA 1 n=23 ... 322 1e-86 UniRef50_A1KRU2 Putative ribosome biogenesis GTPase rsgA n=29 Ta... 322 1e-86 UniRef50_D2MKL2 GTPase EngC n=1 Tax=Candidatus Poribacteria sp. ... 322 1e-86 UniRef50_B2JF36 Putative ribosome biogenesis GTPase rsgA n=56 Ta... 322 2e-86 UniRef50_B4RG68 Ribosome-associated GTPase n=2 Tax=Caulobacterac... 321 2e-86 UniRef50_B3QL20 Putative ribosome biogenesis GTPase rsgA n=11 Ta... 321 2e-86 UniRef50_D2RNU7 Ribosome small subunit-dependent GTPase A n=2 Ta... 321 3e-86 UniRef50_C6X5X0 Ribosome small subunit-stimulated GTPase EngC n=... 321 3e-86 UniRef50_D1R990 Putative uncharacterized protein n=1 Tax=Parachl... 321 3e-86 UniRef50_B9K7Z8 Putative ribosome biogenesis GTPase rsgA n=7 Tax... 319 1e-85 UniRef50_B2RLV5 Putative ribosome biogenesis GTPase rsgA n=28 Ta... 318 1e-85 UniRef50_D1BMC8 Ribosome small subunit-dependent GTPase A n=3 Ta... 318 2e-85 UniRef50_D1T763 Ribosome small subunit-dependent GTPase A n=2 Ta... 318 2e-85 UniRef50_D2R982 Ribosome small subunit-dependent GTPase A n=1 Ta... 317 5e-85 UniRef50_C6WWG3 Ribosome small subunit-dependent GTPase A n=4 Ta... 316 6e-85 UniRef50_C7IKW3 Ribosome small subunit-dependent GTPase A n=1 Ta... 316 9e-85 UniRef50_C4ZNY5 Ribosome small subunit-dependent GTPase A n=3 Ta... 316 1e-84 UniRef50_A9WK24 Ribosome small subunit-dependent GTPase A n=6 Ta... 315 1e-84 UniRef50_Q8YK41 Putative ribosome biogenesis GTPase rsgA 2 n=3 T... 315 1e-84 UniRef50_Q88WF3 Putative ribosome biogenesis GTPase rsgA 2 n=3 T... 315 2e-84 UniRef50_Q2YB53 Putative ribosome biogenesis GTPase rsgA n=6 Tax... 315 2e-84 UniRef50_C9LUJ5 Ribosome small subunit-dependent GTPase A n=2 Ta... 314 3e-84 UniRef50_A7HNP9 Ribosome small subunit-dependent GTPase A n=5 Ta... 314 4e-84 UniRef50_D1YX46 Probable GTPase EngC n=2 Tax=Euryarchaeota RepID... 314 4e-84 UniRef50_B1KX53 Putative ribosome biogenesis GTPase rsgA n=32 Ta... 314 4e-84 UniRef50_Q71ZZ0 Putative ribosome biogenesis GTPase rsgA 2 n=21 ... 312 1e-83 UniRef50_C6D8C7 Ribosome small subunit-dependent GTPase A n=2 Ta... 311 2e-83 UniRef50_B0K1Y6 Ribosome small subunit-dependent GTPase A n=14 T... 311 2e-83 UniRef50_B1YJQ5 Ribosome small subunit-dependent GTPase A n=67 T... 311 3e-83 UniRef50_B0SZL3 Ribosome small subunit-dependent GTPase A n=1 Ta... 311 3e-83 UniRef50_A3I6Q8 Ribosome-associated GTPase n=1 Tax=Bacillus sp. ... 311 3e-83 UniRef50_B1ZUH7 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 310 4e-83 UniRef50_C5CF78 Ribosome small subunit-dependent GTPase A n=1 Ta... 309 8e-83 UniRef50_C3J9M6 Ribosome small subunit-dependent GTPase A n=3 Ta... 309 8e-83 UniRef50_B3QS55 Ribosome small subunit-dependent GTPase A n=1 Ta... 309 1e-82 UniRef50_C5CSN3 Putative ribosome biogenesis GTPase rsgA n=29 Ta... 309 1e-82 UniRef50_Q03FX9 Putative ribosome biogenesis GTPase rsgA n=25 Ta... 308 2e-82 UniRef50_B8CWT4 Ribosome small subunit-dependent GTPase A n=1 Ta... 308 2e-82 UniRef50_C6PE63 Ribosome small subunit-dependent GTPase A n=1 Ta... 308 2e-82 UniRef50_Q6MEY3 Putative uncharacterized protein n=1 Tax=Candida... 307 3e-82 UniRef50_A3ZVZ2 Putative uncharacterized protein n=2 Tax=Plancto... 307 3e-82 UniRef50_D2QSL3 Ribosome small subunit-dependent GTPase A n=2 Ta... 307 3e-82 UniRef50_Q0AXM1 GTPase EngC n=1 Tax=Syntrophomonas wolfei subsp.... 307 3e-82 UniRef50_C4L300 Ribosome small subunit-dependent GTPase A n=1 Ta... 307 5e-82 UniRef50_Q65LI5 GTP-binding protein n=1 Tax=Bacillus licheniform... 307 5e-82 UniRef50_C9RJ19 Ribosome small subunit-dependent GTPase A n=1 Ta... 306 6e-82 UniRef50_Q038H7 Predicted GTPase n=8 Tax=Lactobacillus RepID=Q03... 306 6e-82 UniRef50_C1ZE03 Ribosome small subunit-dependent GTPase A n=2 Ta... 306 1e-81 UniRef50_B0VIG3 Putative GTPase YjeQ n=1 Tax=Candidatus Cloacamo... 306 1e-81 UniRef50_Q7UUZ6 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 306 1e-81 UniRef50_Q8TKG2 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 305 2e-81 UniRef50_B8I262 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 304 2e-81 UniRef50_Q67PQ4 Putative GTPase n=1 Tax=Symbiobacterium thermoph... 304 3e-81 UniRef50_C9LLK1 Ribosome small subunit-dependent GTPase A n=1 Ta... 304 3e-81 UniRef50_Q82LC4 Putative ribosome biogenesis GTPase rsgA n=23 Ta... 304 4e-81 UniRef50_D0L125 Ribosome small subunit-dependent GTPase A n=1 Ta... 304 4e-81 UniRef50_D1ALR3 Ribosome small subunit-dependent GTPase A n=10 T... 303 7e-81 UniRef50_Q3A0G9 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 303 7e-81 UniRef50_B2GD51 Putative ribosome biogenesis GTPase rsgA n=57 Ta... 302 9e-81 UniRef50_B3EBY9 Ribosome small subunit-dependent GTPase A n=1 Ta... 302 9e-81 UniRef50_Q39XI8 GTPase EngC n=2 Tax=Geobacter RepID=Q39XI8_GEOMG 302 1e-80 UniRef50_Q2S3I5 Ribosome small subunit-dependent GTPase A n=2 Ta... 301 2e-80 UniRef50_B6YS07 Putative ribosome biogenesis GTPase rsgA n=16 Ta... 300 5e-80 UniRef50_B3QWC8 Ribosome small subunit-dependent GTPase A n=1 Ta... 299 7e-80 UniRef50_A1ZFA4 Ribosome small subunit-dependent GTPase A n=1 Ta... 298 2e-79 UniRef50_A9KMS1 Ribosome small subunit-dependent GTPase A n=4 Ta... 297 3e-79 UniRef50_A0Q5F4 GTPase n=18 Tax=Francisella RepID=A0Q5F4_FRATN 296 7e-79 UniRef50_Q1WUA8 GTPase n=2 Tax=Lactobacillus salivarius RepID=Q1... 295 1e-78 UniRef50_B1C5S8 Putative uncharacterized protein n=1 Tax=Anaerof... 295 2e-78 UniRef50_C4FT82 Putative uncharacterized protein n=1 Tax=Catonel... 295 2e-78 UniRef50_Q08XU7 Ribosome small subunit-dependent GTPase A n=2 Ta... 295 2e-78 UniRef50_Q7MGA2 Putative ribosome biogenesis GTPase rsgA 2 n=38 ... 294 3e-78 UniRef50_UPI0001789FEF GTPase EngC n=1 Tax=Geobacillus sp. Y412M... 294 3e-78 UniRef50_A8MGJ8 GTPase EngC n=6 Tax=Bacteria RepID=A8MGJ8_ALKOO 294 3e-78 UniRef50_C8WW82 Ribosome small subunit-dependent GTPase A n=2 Ta... 294 4e-78 UniRef50_B9L2Y7 Ribosome small subunit-dependent GTPase A n=2 Ta... 294 4e-78 UniRef50_C6W757 Ribosome small subunit-dependent GTPase A n=1 Ta... 294 5e-78 UniRef50_C0A6W9 Ribosome small subunit-dependent GTPase A n=1 Ta... 293 5e-78 UniRef50_Q8EZ61 Putative ribosome biogenesis GTPase rsgA n=3 Tax... 293 6e-78 UniRef50_Q02DD4 Ribosome small subunit-dependent GTPase A n=1 Ta... 292 2e-77 UniRef50_C6BVN5 Ribosome small subunit-dependent GTPase A n=2 Ta... 292 2e-77 UniRef50_Q6ANG3 Putative uncharacterized protein n=1 Tax=Desulfo... 291 3e-77 UniRef50_Q6MJR6 Putative GTPase n=1 Tax=Bdellovibrio bacteriovor... 291 3e-77 UniRef50_Q8ETB7 Putative ribosome biogenesis GTPase rsgA 1 n=1 T... 290 5e-77 UniRef50_D1VSD9 Ribosome small subunit-dependent GTPase A n=1 Ta... 290 6e-77 UniRef50_Q07I14 Ribosome small subunit-dependent GTPase A n=8 Ta... 290 6e-77 UniRef50_C8WGD6 GTPase EngC n=1 Tax=Eggerthella lenta DSM 2243 R... 289 8e-77 UniRef50_C7HYF6 Ribosome small subunit-dependent GTPase A n=1 Ta... 289 8e-77 UniRef50_A4XL75 Ribosome small subunit-dependent GTPase A n=2 Ta... 289 9e-77 UniRef50_Q73MQ9 GTPase YjeQ n=1 Tax=Treponema denticola RepID=Q7... 289 9e-77 UniRef50_Q5HPX0 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 289 1e-76 UniRef50_B0MPP3 Putative uncharacterized protein n=1 Tax=Eubacte... 287 3e-76 UniRef50_Q6GHL4 Putative ribosome biogenesis GTPase rsgA n=58 Ta... 287 3e-76 UniRef50_Q14LR6 Conserved hypothetical duf258 gtpase protein n=1... 287 4e-76 UniRef50_C7H5I2 Ribosome small subunit-dependent GTPase A n=8 Ta... 287 4e-76 UniRef50_B8FMP2 GTPase EngC n=1 Tax=Desulfatibacillum alkenivora... 287 4e-76 UniRef50_C5NY56 Ribosome small subunit-dependent GTPase A n=1 Ta... 286 1e-75 UniRef50_C4V0Q2 Ribosome-associated GTP-binding protein n=1 Tax=... 285 2e-75 UniRef50_D2UC76 Probable gtpase engc protein n=1 Tax=Xanthomonas... 285 2e-75 UniRef50_O66555 Putative ribosome biogenesis GTPase rsgA n=7 Tax... 285 2e-75 UniRef50_A8RUS7 Putative uncharacterized protein n=2 Tax=Clostri... 285 2e-75 UniRef50_C8PML9 Ribosome small subunit-dependent GTPase A n=1 Ta... 284 2e-75 UniRef50_Q0F2Y7 GTP-binding protein, putative n=1 Tax=Mariprofun... 284 2e-75 UniRef50_A1R8G6 Ribosome small subunit-dependent GTPase A n=3 Ta... 284 3e-75 UniRef50_Q044G6 Putative ribosome biogenesis GTPase rsgA n=27 Ta... 283 6e-75 UniRef50_D0J0X0 Ribosome small subunit-dependent GTPase A n=10 T... 283 6e-75 UniRef50_C5BLQ5 Putative GTPase EngC protein 2 n=1 Tax=Teredinib... 283 7e-75 UniRef50_A4ASQ1 Ribosome-associated GTPase n=1 Tax=Flavobacteria... 283 7e-75 UniRef50_Q729X9 GTP-binding protein, putative n=4 Tax=Desulfovib... 282 1e-74 UniRef50_A6CYS2 Ribosome-associated GTPase n=2 Tax=Vibrionaceae ... 282 2e-74 UniRef50_A4SW79 Ribosome small subunit-dependent GTPase A n=2 Ta... 281 2e-74 UniRef50_Q2JW76 Ribosome small subunit-dependent GTPase A n=2 Ta... 281 2e-74 UniRef50_A6WF06 GTPase EngC n=8 Tax=Actinomycetales RepID=A6WF06... 280 5e-74 UniRef50_A8LW34 Ribosome small subunit-dependent GTPase A n=3 Ta... 280 6e-74 UniRef50_Q8A8H7 Putative ribosome biogenesis GTPase rsgA 1 n=9 T... 280 7e-74 UniRef50_C7RGU6 Ribosome small subunit-dependent GTPase A n=4 Ta... 279 8e-74 UniRef50_A6DJW3 Ribosome-associated GTPase n=1 Tax=Lentisphaera ... 279 2e-73 UniRef50_A6GEV4 Ribosome-associated GTPase n=2 Tax=Deltaproteoba... 278 2e-73 UniRef50_B2SLQ8 Putative ribosome biogenesis GTPase rsgA n=19 Ta... 278 2e-73 UniRef50_C6BWU3 GTPase EngC n=1 Tax=Desulfovibrio salexigens DSM... 278 3e-73 UniRef50_B8DLQ8 GTPase EngC n=1 Tax=Desulfovibrio vulgaris str. ... 277 3e-73 UniRef50_C5C2S6 GTPase EngC n=1 Tax=Beutenbergia cavernae DSM 12... 277 3e-73 UniRef50_A6GTD7 Ribosome small subunit-dependent GTPase A n=1 Ta... 277 3e-73 UniRef50_A9EN60 Putative uncharacterized protein n=1 Tax=Sorangi... 277 4e-73 UniRef50_C0VZX3 Possible GTP-binding protein n=1 Tax=Actinomyces... 276 7e-73 UniRef50_Q03RY0 Predicted GTPase n=1 Tax=Lactobacillus brevis AT... 276 7e-73 UniRef50_Q8YUA3 Putative ribosome biogenesis GTPase rsgA 1 n=19 ... 276 7e-73 UniRef50_B3PN77 GTPase YjeQ/EngC n=1 Tax=Mycoplasma arthritidis ... 276 9e-73 UniRef50_D2S5Q8 Ribosome small subunit-dependent GTPase A n=1 Ta... 275 2e-72 UniRef50_Q30WI2 GTPase n=2 Tax=Deltaproteobacteria RepID=Q30WI2_... 274 2e-72 UniRef50_B2UNU0 GTPase EngC n=3 Tax=Verrucomicrobiales RepID=B2U... 274 3e-72 UniRef50_C2HH17 GTP-binding protein n=2 Tax=Finegoldia magna Rep... 274 3e-72 UniRef50_C8NZ87 Ribosome small subunit-dependent GTPase A n=4 Ta... 274 4e-72 UniRef50_D1AJL1 Ribosome small subunit-dependent GTPase A n=2 Ta... 273 8e-72 UniRef50_Q2BLA6 GTPase n=1 Tax=Neptuniibacter caesariensis RepID... 272 1e-71 UniRef50_D0LVG1 Ribosome small subunit-dependent GTPase A n=1 Ta... 272 2e-71 UniRef50_Q8R685 Putative ribosome biogenesis GTPase rsgA n=15 Ta... 271 3e-71 UniRef50_B9NLX8 Ribosome small subunit-dependent GTPase A n=2 Ta... 271 3e-71 UniRef50_C8ZYN3 Ribosome-associated GTPase n=4 Tax=Enterococcus ... 270 4e-71 UniRef50_A5IY02 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 270 6e-71 UniRef50_C7QYQ8 GTPase EngC n=1 Tax=Jonesia denitrificans DSM 20... 270 7e-71 UniRef50_D1J8S7 Probable GTPase engC n=1 Tax=Mycoplasma hominis ... 270 7e-71 UniRef50_C4G9D9 Putative uncharacterized protein n=1 Tax=Shuttle... 270 7e-71 UniRef50_Q98JM4 Putative ribosome biogenesis GTPase rsgA n=14 Ta... 270 8e-71 UniRef50_A6W235 GTPase EngC n=2 Tax=cellular organisms RepID=A6W... 269 2e-70 UniRef50_B0JW21 Putative ribosome biogenesis GTPase rsgA n=8 Tax... 269 2e-70 UniRef50_C0R0A9 Ribosome-associated GTPase n=2 Tax=Brachyspira R... 268 2e-70 UniRef50_C6XMF8 GTPase EngC n=16 Tax=Alphaproteobacteria RepID=C... 268 2e-70 UniRef50_D2AX52 Ribosome-associated GTPase n=3 Tax=Actinomycetal... 266 8e-70 UniRef50_A0L4L3 GTPase EngC n=1 Tax=Magnetococcus sp. MC-1 RepID... 266 9e-70 UniRef50_D2MQI0 Ribosome small subunit-dependent GTPase A n=1 Ta... 265 1e-69 UniRef50_B9ZJR5 Ribosome small subunit-dependent GTPase A n=1 Ta... 265 1e-69 UniRef50_D1BG37 Predicted GTPase n=1 Tax=Sanguibacter keddieii D... 265 2e-69 UniRef50_B8HA01 GTPase EngC n=1 Tax=Arthrobacter chlorophenolicu... 265 2e-69 UniRef50_A1AQR2 Ribosome small subunit-dependent GTPase A n=4 Ta... 265 2e-69 UniRef50_A4XCG5 GTPase EngC n=1 Tax=Salinispora tropica CNB-440 ... 264 5e-69 UniRef50_B5JHE4 Putative uncharacterized protein n=1 Tax=Verruco... 264 5e-69 UniRef50_Q2SSL6 Ribosome small subunit-dependent GTPase A n=4 Ta... 262 1e-68 UniRef50_D2B3W4 Ribosome-associated GTPase n=1 Tax=Streptosporan... 262 1e-68 UniRef50_Q04XB7 GTPase n=6 Tax=Leptospira RepID=Q04XB7_LEPBL 261 2e-68 UniRef50_B4UM25 Ribosome small subunit-dependent GTPase A n=4 Ta... 261 2e-68 UniRef50_Q1K3F8 GTPase EngC n=1 Tax=Desulfuromonas acetoxidans D... 261 3e-68 UniRef50_Q114R1 Ribosome small subunit-dependent GTPase A n=2 Ta... 261 3e-68 UniRef50_Q8EUL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 260 6e-68 UniRef50_C7NDT0 Ribosome small subunit-dependent GTPase A n=2 Ta... 260 7e-68 UniRef50_C7MLK1 Predicted GTPase n=4 Tax=Coriobacteriaceae RepID... 259 1e-67 UniRef50_A8SM04 Putative uncharacterized protein n=1 Tax=Parvimo... 259 2e-67 UniRef50_C1CZT1 Putative GTPase engC protein 2 n=1 Tax=Deinococc... 258 2e-67 UniRef50_Q7NDG7 Glr4268 protein n=1 Tax=Gloeobacter violaceus Re... 258 2e-67 UniRef50_B2A2K9 Ribosome small subunit-dependent GTPase A n=1 Ta... 258 2e-67 UniRef50_B9RMG0 GTP binding protein, putative n=1 Tax=Ricinus co... 257 3e-67 UniRef50_D2NNY6 Predicted GTPase n=2 Tax=Rothia mucilaginosa Rep... 257 7e-67 UniRef50_Q28KH3 GTPase EngC n=5 Tax=Rhodobacteraceae RepID=Q28KH... 256 7e-67 UniRef50_Q7VEJ4 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 256 7e-67 UniRef50_A4S3D3 Predicted protein n=3 Tax=Mamiellales RepID=A4S3... 256 8e-67 UniRef50_A6GEY2 Probable GTPase n=1 Tax=Plesiocystis pacifica SI... 255 1e-66 UniRef50_D0LXL5 GTPase EngC n=1 Tax=Haliangium ochraceum DSM 143... 255 2e-66 UniRef50_Q73J49 GTPase YjeQ, putative n=1 Tax=Treponema denticol... 255 2e-66 UniRef50_B3EHA2 GTPase EngC n=4 Tax=Bacteria RepID=B3EHA2_CHLL2 254 3e-66 UniRef50_B6W6J9 Putative uncharacterized protein n=1 Tax=Anaeroc... 254 4e-66 UniRef50_A0JYB3 GTPase EngC n=8 Tax=Micrococcineae RepID=A0JYB3_... 253 6e-66 UniRef50_A3CQN2 GTPase, putative n=3 Tax=Streptococcus RepID=A3C... 252 2e-65 UniRef50_B5RLH3 Putative ribosome biogenesis GTPase rsgA n=22 Ta... 251 3e-65 UniRef50_B9HDG9 Predicted protein (Fragment) n=1 Tax=Populus tri... 250 6e-65 UniRef50_B5W2A4 GTPase EngC n=2 Tax=Arthrospira RepID=B5W2A4_SPIMA 250 6e-65 UniRef50_B1AIK5 Putative ribosome biogenesis GTPase rsgA n=15 Ta... 250 6e-65 UniRef50_C4DFS4 Predicted GTPase n=2 Tax=Actinomycetales RepID=C... 248 2e-64 UniRef50_O64802 T1F15.10 protein n=14 Tax=Magnoliophyta RepID=O6... 248 2e-64 UniRef50_UPI0001982B97 PREDICTED: hypothetical protein isoform 4... 248 3e-64 UniRef50_C4FBQ3 Putative uncharacterized protein n=2 Tax=Collins... 247 3e-64 UniRef50_A3V5J3 Putative uncharacterized protein n=1 Tax=Loktane... 247 7e-64 UniRef50_B5Y7I4 Ribosome small subunit-dependent GTPase A n=1 Ta... 247 7e-64 UniRef50_Q4A6T0 Putative ATP/GTP-binding protein n=1 Tax=Mycopla... 246 8e-64 UniRef50_Q98PN8 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 242 1e-62 UniRef50_Q46I43 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 242 2e-62 UniRef50_Q601H2 Putative ribosome biogenesis GTPase rsgA n=4 Tax... 242 2e-62 UniRef50_A4E9Q8 Putative uncharacterized protein n=2 Tax=Collins... 241 3e-62 UniRef50_Q6XR83 Uvs038 n=3 Tax=cellular organisms RepID=Q6XR83_9... 240 6e-62 UniRef50_C8W7M5 GTPase EngC n=1 Tax=Atopobium parvulum DSM 20469... 240 7e-62 UniRef50_Q6KH84 Predicted GTPase protein n=1 Tax=Mycoplasma mobi... 238 2e-61 UniRef50_A4XB51 GTPase EngC n=105 Tax=Bacteria RepID=A4XB51_SALTO 237 5e-61 UniRef50_B5IIZ2 GTPase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5II... 236 7e-61 UniRef50_B1V9R1 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 236 7e-61 UniRef50_UPI0001C31887 GTPase EngC n=1 Tax=Conexibacter woesei D... 233 1e-59 UniRef50_C1YSI8 Predicted GTPase n=1 Tax=Nocardiopsis dassonvill... 232 1e-59 UniRef50_D2NSB1 Predicted GTPase n=5 Tax=Actinomycetales RepID=D... 231 3e-59 UniRef50_A9RXD5 Predicted protein n=1 Tax=Physcomitrella patens ... 231 3e-59 UniRef50_D1AV99 Ribosome small subunit-dependent GTPase A n=1 Ta... 229 1e-58 UniRef50_C2BSD9 GTP-binding protein n=1 Tax=Mobiluncus curtisii ... 229 1e-58 Sequences not found previously or not previously below threshold: >UniRef50_A6TH78 Putative ribosome biogenesis GTPase rsgA n=304 Tax=Proteobacteria RepID=RSGA_KLEP7 Length = 353 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 313/353 (88%), Positives = 328/353 (92%), Gaps = 3/353 (0%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MSKNKLSKGQQRRV ANHQRRLKT+ EK DYDDNLFGE EGIVISRFGMHADVESADG Sbjct: 1 MSKNKLSKGQQRRVKANHQRRLKTTAEKADYDDNLFGETSEGIVISRFGMHADVESADGS 60 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 VHRCNIRRTIRSLVTGDRVVWRPGK AA+GV+VKGIVEAVH+R SVLTRPDFYDGVKPIA Sbjct: 61 VHRCNIRRTIRSLVTGDRVVWRPGKDAADGVSVKGIVEAVHDRASVLTRPDFYDGVKPIA 120 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANIDQIV+VSAILPELSLNIIDRYLVACE IEP+IVLNKIDLLDD+G+ FVNEQMDIY Sbjct: 121 ANIDQIVVVSAILPELSLNIIDRYLVACEAQDIEPLIVLNKIDLLDDDGLRFVNEQMDIY 180 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGL-QKEILTNDI 239 RNIGYRVL+VSS TQDGLKPLE ALT RISIFAGQSGVGKSSLLNALLGL + +ILTND+ Sbjct: 181 RNIGYRVLLVSSRTQDGLKPLEAALTDRISIFAGQSGVGKSSLLNALLGLSEDQILTNDV 240 Query: 240 SDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKY 299 SD SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE EQIT GFVEFHDYLG CKY Sbjct: 241 SDVSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEAEQITNGFVEFHDYLGRCKY 300 Query: 300 RDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA--QVKTRKNFSDTDD 350 RDCKHDTDPGCA+REAVE GKIAE+RFENYHRILESMA QVKTRKNFS +DD Sbjct: 301 RDCKHDTDPGCALREAVENGKIAESRFENYHRILESMAQVQVKTRKNFSSSDD 353 >UniRef50_C9PQI0 Putative uncharacterized protein n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PQI0_9PAST Length = 354 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 188/350 (53%), Positives = 262/350 (74%), Gaps = 7/350 (2%) Query: 1 MSKNKLSKGQQRRVNANHQRRL----KTSKEKPDYDDNLFGEPDEGIVISRFGMHADVES 56 +SK KL++ Q+RR+ +N+++ L + K++ ++ D++ GE +GIV++R+ +HADVE+ Sbjct: 6 LSKRKLTQNQKRRIQSNNEKALHRHQRREKKEIEWQDDMLGESQDGIVVTRYSVHADVEN 65 Query: 57 ADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV 116 A G++ RCN+RRT+ SLV GDRVVWR G +GV+ G++EA+ R + +TRPD+YDG+ Sbjct: 66 AQGEIFRCNLRRTLSSLVVGDRVVWRQGNQQLQGVS--GVIEAIKPRQNEITRPDYYDGL 123 Query: 117 KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 K IAANID+I+IVSA+LP LSLNIIDRYLV CET I +IV+NK+DLL DE V EQ Sbjct: 124 KVIAANIDRIIIVSAVLPTLSLNIIDRYLVICETANIPAVIVVNKVDLLTDEARKEVEEQ 183 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 + IY IGY+ +M+S+ + + ++ L SI GQSGVGKSSL+N +L + Sbjct: 184 LKIYEKIGYQTMMISAMSGENMEKLTALFNNSTSILVGQSGVGKSSLINHILP-EVNAHV 242 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 DIS+NSGLGQHTTT++RLYH GG++IDSPG+REFGLWHLE +QIT+G+ EF +LG Sbjct: 243 GDISENSGLGQHTTTSSRLYHLNQGGNLIDSPGIREFGLWHLEQDQITKGYREFQYFLGT 302 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 CK+RDCKH DPGCA+REAVE+GKI RF+NYHR++ S+ + K+++ FS Sbjct: 303 CKFRDCKHLNDPGCALREAVEQGKIHSVRFDNYHRLIASLNETKSQRYFS 352 >UniRef50_A8FRC7 Ribosome small subunit-dependent GTPase A n=9 Tax=Gammaproteobacteria RepID=A8FRC7_SHESH Length = 352 Score = 419 bits (1077), Expect = e-116, Method: Composition-based stats. Identities = 189/354 (53%), Positives = 245/354 (69%), Gaps = 7/354 (1%) Query: 1 MSKNK-LSKGQQRRVNANHQRRLKT---SKEKPDYDDNLFGEPDEGIVISRFGMHADVES 56 MSK K LS+GQ+RR+ AN ++RL+ + D+ G G VISRFG HAD+E+ Sbjct: 1 MSKKKPLSQGQRRRMRANQEKRLQRKDSGSNASELQDSSLGPEQLGTVISRFGQHADIET 60 Query: 57 ADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV 116 G + RCNIRR I+SLVTGD+VV R K G + G+VEAVH R S L+RPD YDG+ Sbjct: 61 ESGQLARCNIRRNIQSLVTGDKVVARLAKDIETG--IAGVVEAVHPRHSSLSRPDMYDGI 118 Query: 117 KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 K IAANIDQI+IVS+++P + IIDRYLVA E I PII+LNKIDLL DE V Sbjct: 119 KIIAANIDQILIVSSVVPSFTTQIIDRYLVAAEDTGISPIIILNKIDLLTDEERPEVEAA 178 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 ++ YR+IGY V VSS + G++ +++ L +S+F GQSGVGKSSL+NA++ E+ Sbjct: 179 LERYRDIGYPVYQVSSKSGLGVEGIKDLLNENVSVFVGQSGVGKSSLINAMMP-DAELQI 237 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 D+S+NSGLGQHTTT A+L HF GGD++DSPGVREF LWHL E++ F+EF DYLG Sbjct: 238 GDVSENSGLGQHTTTTAKLLHFASGGDLVDSPGVREFALWHLPAERVGWCFIEFRDYLGT 297 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 CK+RDCKH DPGCAI A +GKIAE R+ NYH+I+ S+ + + ++F D Sbjct: 298 CKFRDCKHKNDPGCAITAAFNDGKIAEDRYNNYHKIIASLDEQRHARHFRSGSD 351 >UniRef50_Q0VMD9 Putative ribosome biogenesis GTPase rsgA n=40 Tax=Bacteria RepID=RSGA_ALCBS Length = 352 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 152/356 (42%), Positives = 226/356 (63%), Gaps = 17/356 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDD----NLFGEPDEGIVISRFGMHADVES 56 M+K KL++ Q+ R+ + + + D + + G+ G++ + FG +VES Sbjct: 1 MAKRKLNRRQRWRIEKIQAEKRDRANRRTDQQEILVADDLGDEQHGVITAHFGQQVEVES 60 Query: 57 ADG------DVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP 110 ADG RC+ R T+ LV GD+V+W+P P +EG+ G+V A+ R +VL RP Sbjct: 61 ADGPGAENRTTRRCHFRATLEQLVVGDKVIWQP--PKSEGL---GVVVAIEPRDTVLKRP 115 Query: 111 DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGM 170 D Y +KP+AAN++Q+++V A LP S +++DRYLVA E I +VLNK DL+DD Sbjct: 116 DMYGNLKPVAANVEQMLVVFAPLPTPSSSLLDRYLVAAELSGIAATLVLNKADLIDDTLR 175 Query: 171 AFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGL 230 FV+E D+YR++GY VL V +H ++GL PL EAL G+ S+F GQSGVGKSSL+N +L Sbjct: 176 PFVDELSDMYRHLGYPVLEVCAHQREGLTPLHEALAGKTSVFVGQSGVGKSSLINGVLP- 234 Query: 231 QKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEF 290 + ++ ++S NSGLGQHTT ARL H P GG +IDSPG+REFGLWH+ + + G+ E Sbjct: 235 EADLQVGELSSNSGLGQHTTVTARLVHLPTGGQLIDSPGIREFGLWHIGEDDLLHGYREL 294 Query: 291 HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 + G CK+R+C H +PGCA+ A + G I E R N+++I +++ + R+ +S Sbjct: 295 SELAGYCKFRNCSHRNEPGCALILAAQNGDIDEERLANFYQISDTLNE-DGRERYS 349 >UniRef50_Q21H92 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Gammaproteobacteria RepID=RSGA_SACD2 Length = 343 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 148/349 (42%), Positives = 206/349 (59%), Gaps = 20/349 (5%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADG- 59 M+K +LSK Q R+ +RL TS PD G G+VI+ G VE+ D Sbjct: 1 MAKRRLSKRQVDRIRERQSQRLDTSVAAPD--GKQLGSEQAGLVIAHHGKQVQVETLDNS 58 Query: 60 ----DVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG 115 RC++R T+ S+VTGDR+V++ + GI+ A+ R+S L RPD Y Sbjct: 59 DDSPRRLRCHLRATLGSVVTGDRIVFQEDDSS-------GIIVAIQPRSSTLVRPDSYGK 111 Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMA---- 171 +KP+AAN+DQ++I A PE +IDRYL E L I P+++ NK+DLL + + Sbjct: 112 LKPVAANVDQLLITIACAPEPFSGLIDRYLAVAENLHIRPVLLFNKLDLLQSDEIDSAIA 171 Query: 172 -FVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGL 230 V + +Y ++GYR + + DGL L L S+F GQSGVGKSS++ LL Sbjct: 172 NKVAKLRTLYTSLGYRCIDTCAKNGDGLDELRNTLQDNTSVFVGQSGVGKSSIIKKLLPD 231 Query: 231 QKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEF 290 Q EI +SD G+HTTT + L+HFP GGD IDSPG+REFGLWHL P+++T GF+E Sbjct: 232 Q-EIAIGALSDAIDKGRHTTTHSELFHFPFGGDCIDSPGIREFGLWHLSPKEVTYGFIEI 290 Query: 291 HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 D GLCK+RDC H +P CA+ AVE+G + R+EN+ RI++S+ V Sbjct: 291 RDIAGLCKFRDCSHTHEPSCAVLNAVEDGSLHPERYENFQRIVQSLDDV 339 >UniRef50_C5BRI8 Ribosome small subunit-dependent GTPase A n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRI8_TERTT Length = 328 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 148/342 (43%), Positives = 208/342 (60%), Gaps = 17/342 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 M+K KL++ Q RR+ + +T++ G+VISR+G ADVE+A G+ Sbjct: 1 MAKRKLTQQQSRRIAKQQKALRQTTE---------LENVLPGLVISRYGKQADVETASGE 51 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 ++RC++RR + LVTGDRV + ++ +V + L RPD Y +K I Sbjct: 52 LYRCHLRRNLGDLVTGDRVALQLEDEG-------AVIVSVEPAKNRLQRPDSYGKLKAIG 104 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANIDQ+VIV A PE N+IDRYLV E L ++P++++NK DL+ + E +Y Sbjct: 105 ANIDQMVIVIAPQPEAHPNLIDRYLVVAENLDVQPLLLVNKSDLIAPSSHETLTEIAQLY 164 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 ++ Y +L VS+ G+ LE L R SIF GQSGVGKSSLL LL + ++ D+S Sbjct: 165 SSLHYPILHVSAKADMGMAALEAQLANRTSIFVGQSGVGKSSLLQNLLPGE-DLKIGDLS 223 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 + G G+HTTT ARLYHF GG+ IDSPG+REFGLWH + Q+ GFVE Y G CK+ Sbjct: 224 EQVGKGKHTTTYARLYHFSSGGNCIDSPGIREFGLWHFDKTQLLNGFVELRQYGGSCKFS 283 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 DC H+ DPGCAIREAV+ G+I R+E++ RI ++ V+ + Sbjct: 284 DCSHNNDPGCAIREAVDAGEIQPQRYESFLRIAATLDDVQVK 325 >UniRef50_Q5ZRX8 EngC GTPase n=6 Tax=Legionella RepID=Q5ZRX8_LEGPH Length = 325 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 138/341 (40%), Positives = 201/341 (58%), Gaps = 16/341 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MSK +++K Q R+ K +Y N +G+VI+RF HA++E G Sbjct: 1 MSKRRINKQQSARIAKIQ-------KNYHEYMGNNSDNLADGLVITRFSRHAEIEDNQGK 53 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 C+IR + +LV GDRV+W+ +G+V +++ R S+L RP +P+A Sbjct: 54 RILCSIRPNLDTLVAGDRVIWQIEGE------KQGVVVSIYPRGSLLARPSQKGLKRPVA 107 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANI Q+V+V A PE+S ++D YL+ E LQ+ +IVLNKIDL M Y Sbjct: 108 ANITQLVVVIAPKPEISWPLLDSYLIMAEILQVHVVIVLNKIDL---PCQTLQQRLMMDY 164 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 + + Y V+M S+ T D + PL++AL +IS+F GQSGVGKSSL+++LL ++ I + IS Sbjct: 165 QLLNYPVIMASNQTPDTIVPLKQALNNQISVFVGQSGVGKSSLISSLLPHEENIAIDKIS 224 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 S LG+HTT +R YH P GG +IDSPGVREF LW ++ I QG+ EF YL CK+R Sbjct: 225 MVSELGKHTTRNSRYYHLPSGGALIDSPGVREFSLWDIDCSMIAQGYKEFKPYLSQCKFR 284 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKT 341 +C H P CAI +A+ +GKI+ R+EN+ ++ +K Sbjct: 285 NCTHINTPQCAIIDALNKGKISTQRYENFTKLCAQFNSLKE 325 >UniRef50_D1KB75 GTPase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KB75_9GAMM Length = 321 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 127/333 (38%), Positives = 186/333 (55%), Gaps = 14/333 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MS + K + ++ A R + + + + GE G+VI+R+G VES GD Sbjct: 1 MSLTRRQKWRIEKIQAERIARAQKASSNSETSLDNAGEEQTGLVITRYGQRLLVESESGD 60 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 +++C R+ I V GD+V+++ +G+V A+ +R + LTR K IA Sbjct: 61 LYQCTGRQNIELSVAGDQVLFQTTD------GNEGVVTALLKRDNSLTR-----SQKLIA 109 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANID++ +V AI P +IDRYLV E + IV+NKI+L + + V +Y Sbjct: 110 ANIDELWLVVAIEPHYQFELIDRYLVVAENASLPINIVVNKIEL--SKNIDQVKYDFSMY 167 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 + GY V +S Q + + L + IF GQSGVGKSSL+N L+ + N+IS Sbjct: 168 ESAGYNVSYLSVKEQTNVAEFKSQLNDKTHIFLGQSGVGKSSLINELIP-DLNLRVNEIS 226 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 S LG+HTTT LYH P GGD+IDSPG+REF L L ++I GF EF ++G CK+R Sbjct: 227 TKSKLGKHTTTNTTLYHIPSGGDLIDSPGIREFQLDDLTDKEILSGFREFKPFIGQCKFR 286 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 +C H +P CAI+ AVE G+I R+ NY +++ Sbjct: 287 NCAHINEPKCAIKTAVEAGEINPMRYNNYLQLI 319 >UniRef50_B7H060 Ribosome small subunit-dependent GTPase A n=17 Tax=Acinetobacter RepID=B7H060_ACIB3 Length = 352 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 145/367 (39%), Positives = 215/367 (58%), Gaps = 44/367 (11%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVES---- 56 + K +L++ QQRR+ H+ R +E+ D +L +G+V+ +G +V++ Sbjct: 4 IRKRRLTEQQQRRIEKQHKTR----QEEVDTSQDL-----DGLVVQHYGRQLEVQALSVP 54 Query: 57 ---------ADGD------------VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 A+G+ V RC+ R + LVTGDRV W+ A+ G Sbjct: 55 DHHPEKPQVAEGEPEPFWKPIELNSVWRCHTRTNLELLVTGDRVKWQ-----ADPNTGLG 109 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 I+ A+H RTS+LTRPD Y VKP+AANI IVIV A LPE + +IDRYLVAC I Sbjct: 110 IITAIHPRTSLLTRPDRYHKVKPVAANISLIVIVFAPLPEPAPTLIDRYLVACADANIPA 169 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++VLNK DLL + + + + Y N+GY V++ H++ + L + L G F GQ Sbjct: 170 LLVLNKSDLLTENDP--ILDMLKEYENLGYEVMIC--HSKGDISALSQRLDGETVAFVGQ 225 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSL+N L+ E TN IS+NS LGQHTTT+ RL +F G +IDSPG+REFGL Sbjct: 226 SGVGKSSLINVLIP-DAEQKTNIISENSALGQHTTTSTRLINFGKNGALIDSPGIREFGL 284 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 WHL+ ++I GF E +LG C++R+C H + C +++AVE G+I R +++ R+++ Sbjct: 285 WHLDLDKIRMGFPEIEAHLGSCQFRNCTHTHEKNCGLKQAVEAGEILPRRLDSFLRLIDE 344 Query: 336 MAQVKTR 342 + + + + Sbjct: 345 IQEAQQK 351 >UniRef50_A4J589 Ribosome small subunit-dependent GTPase A n=3 Tax=Clostridiales RepID=A4J589_DESRM Length = 292 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 106/308 (34%), Positives = 163/308 (52%), Gaps = 25/308 (8%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR-----SLVTGDRVVWRPGKPAAEGVNVKG 95 EG++I +G V+ D ++ C++R R + GDRV+ P + G Sbjct: 3 EGVLIRAYGGFYYVKKGD-EIWECSLRGKFRLGKSSPALVGDRVMVTPVRQNT------G 55 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 ++ V R + L RP ANIDQ VIV A+ PE ++ ++DR+LV E ++ Sbjct: 56 RIDEVMPRKTELFRPA--------VANIDQAVIVFAVENPEPNMTLLDRFLVLAENAEVL 107 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 P++ LNK DLL +E + +Y+ IGY ++ S+ +G+ L + L G+ ++FAG Sbjct: 108 PVVCLNKGDLLTSRRD---HEWLKLYKRIGYPTIITSTKLGEGINELRQLLIGKTTVFAG 164 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGKSSLLNA+ E+ T DIS G+HTT L GG V+DSPG Sbjct: 165 PSGVGKSSLLNAIQPG-LELKTGDISHKLKRGKHTTRHVELLPLNKGGYVVDSPGFSSLD 223 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L + E + F EF ++ CK+ C H +P CA+++A++ G I + R++NY LE Sbjct: 224 LPQMNKEDLAYYFPEFTGFIADCKFNGCLHHREPQCAVKDALDAGLINKERYQNYLLFLE 283 Query: 335 SMAQVKTR 342 + Q + R Sbjct: 284 EVLQQERR 291 >UniRef50_Q31HZ7 Ribosome small subunit-dependent GTPase A n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HZ7_THICR Length = 340 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 130/343 (37%), Positives = 194/343 (56%), Gaps = 12/343 (3%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 M+K KLS Q+RRV + GE G+VI+ FG +E DG Sbjct: 1 MAKRKLSNQQRRRVQQKQHAESGVT-PNTSATSEHLGEKQPGLVITNFGKRLLIEDNDGH 59 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 ++ C R+ + LV GDRV W+ + G+V + RT L+RP F + +A Sbjct: 60 IYNCAARQHLGKLVAGDRVTWQ-----TDIEPNTGVVVSAEPRTQELSRPGFRGQKRMVA 114 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD-DEGMAFVNEQMDI 179 ANID + IV+ + P + ++IDRYLVA L + +I++NKIDL++ DE + E + Sbjct: 115 ANIDWLGIVAPVEPGIHPDMIDRYLVAAHQLDLPVLILINKIDLIESDEQWEAIAELLIP 174 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDI 239 Y + +L VS+ T +G+ L E L + S+F G SG GKSSL+ AL+ EI TN + Sbjct: 175 YDEMDIEILPVSAETNEGMDELREVLMNKNSVFVGPSGAGKSSLIKALIP-DIEIKTNQL 233 Query: 240 SDNSGLGQHTTTAARLYHFPH----GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG 295 S+++GLG+HTTT + LYH P G++IDSPGVR+F E ++ Q + +F +LG Sbjct: 234 SESTGLGKHTTTNSILYHLPEFEGQTGNIIDSPGVRQFSPAPCELHELEQAYPDFAPFLG 293 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 CK+ +C H +P CAI+ AVE G+I TRF+++ R+L + Sbjct: 294 QCKFSNCTHTNEPDCAIKHAVETGEIYYTRFQSFQRLLSEFKE 336 >UniRef50_C5D8S1 Putative ribosome biogenesis GTPase rsgA n=6 Tax=Bacteria RepID=RSGA_GEOSW Length = 293 Score = 349 bits (896), Expect = 8e-95, Method: Composition-based stats. Identities = 118/307 (38%), Positives = 166/307 (54%), Gaps = 22/307 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 EG +I V S G V +C R R + GD V ++ +G Sbjct: 3 EGKIIKALSGFYYVLSE-GKVFQCRGRGVFRKQKITPLVGDHVEFQATSE------TEGY 55 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQIEP 155 + + ER + L RP AN++Q ++V A+ P+ S ++DR+LV E+ I P Sbjct: 56 IMNIRERKNWLVRP--------PIANVEQAILVFSAVEPDFSTRLLDRFLVLVESKHIRP 107 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 IIV+NK+DL+DD+ + + + YR IGY V+ S+ T+ G++ L L G IS+FAGQ Sbjct: 108 IIVVNKMDLVDDQTKPTMEQYIRDYRQIGYDVIETSTITKLGVEQLLSYLEGHISVFAGQ 167 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSLLNAL ++ TNDIS + G G+HTT L GG V D+PG L Sbjct: 168 SGVGKSSLLNALRP-DLQLKTNDISTHLGRGKHTTRHVELLEI-GGGLVADTPGFSALEL 225 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 +E E++ F EF + CK+R C H +P CA+REAVE GKI R+ENY +E Sbjct: 226 DDIELEELPLYFPEFCERSEECKFRGCLHIAEPKCAVREAVESGKIPSYRYENYISFVEE 285 Query: 336 MAQVKTR 342 + + K R Sbjct: 286 IKERKPR 292 >UniRef50_Q0A8I5 Ribosome small subunit-dependent GTPase A n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8I5_ALHEH Length = 334 Score = 348 bits (894), Expect = 1e-94, Method: Composition-based stats. Identities = 120/331 (36%), Positives = 179/331 (54%), Gaps = 14/331 (4%) Query: 14 VNANHQRRLKTSKEKPDYDDNLFGEP-------DEGIVISRFGMHADVESADGDVHRCNI 66 V Q R + + +PD++ GEP G V+S G + VE +G ++RC Sbjct: 11 VRTVAQSRSRRHQPRPDHNHPGDGEPPVSPAAGQTGRVVSHHGRESLVEDREGRLYRCLS 70 Query: 67 RRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQI 126 + + + GD V W P + G+++ +H R V+ R + V+ IAAN+D++ Sbjct: 71 LKRVGRPLCGDYVDWHPET------DETGVIDRIHPRHGVIARTAYNGRVQAIAANVDRM 124 Query: 127 VIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR 186 V+VSA+ P +I+RYLV L +EP++ LNK DL D+ + +R G Sbjct: 125 VVVSALEPPPDPELINRYLVLAHHLAVEPLLWLNKTDLDPDQAERLLASVFAGHRARGVA 184 Query: 187 VLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLG 246 V+ S HT +G++ L EAL S+ G SGVGKSSL+ ALL +++ D+S SGLG Sbjct: 185 VMAGSPHTGEGMETLREALREGTSVLVGLSGVGKSSLIKALLP-DRDLRIGDLSARSGLG 243 Query: 247 QHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDT 306 +HTTT LYH P GGD+IDSPG+R L ++ E + F E C++ +C+H Sbjct: 244 RHTTTETTLYHLPEGGDLIDSPGIRALRLANIPREALQPAFPEIARVASGCRFHNCQHRN 303 Query: 307 DPGCAIREAVEEGKIAETRFENYHRILESMA 337 +PGCA+R AVE G+I R H +L+ A Sbjct: 304 EPGCAVRAAVERGEIEPGRLATLHHLLDEAA 334 >UniRef50_C9MMH3 Ribosome small subunit-dependent GTPase A n=7 Tax=Prevotella RepID=C9MMH3_9BACT Length = 335 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 107/319 (33%), Positives = 165/319 (51%), Gaps = 22/319 (6%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVNV 93 G+VI G V++ +G C I+ R + GD VV P K Sbjct: 24 GLVIKNTGSWYTVKAENGKNIDCKIKGNFRLKGIRSTNPVAVGDHVVITPNKEGT----- 78 Query: 94 KGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACET 150 + + +R + + R P+ IAANIDQ +V I PE S IDR+L E Sbjct: 79 -AFITEIEDRRNYIIRKSPNLSKQSHIIAANIDQAFLVVTINYPETSTTFIDRFLAGAEA 137 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG----LKPLEEALT 206 ++ +V NK DLL +E + + + M +Y IGY + V + ++ L L Sbjct: 138 YRVPVTLVFNKHDLLSEEELRYQHAVMKLYETIGYECIEVQATNDTSNEFSVEKLNPLLA 197 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 +I++ +G SGVGKS+++NALL + T DISD G HTTT + + P GG +ID Sbjct: 198 NKITLLSGNSGVGKSTIINALLP-HVNLRTADISDAHNTGMHTTTFSEMLELPVGGYLID 256 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG++ FG + +E E++T F E + CK+ +C H +PGCA+R+AVE+ I+E+R+ Sbjct: 257 TPGIKGFGTFDIEREELTSYFREIFKFSEHCKFSNCTHTHEPGCAVRKAVEDHYISESRY 316 Query: 327 ENYHRILESMAQVKTRKNF 345 +Y +LE + K R+ F Sbjct: 317 NSYLSMLEDKEENKYREAF 335 >UniRef50_A0LCF1 Ribosome small subunit-dependent GTPase A n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCF1_MAGSM Length = 346 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 129/345 (37%), Positives = 211/345 (61%), Gaps = 16/345 (4%) Query: 4 NKLSKGQQRRVNAN-----HQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESAD 58 KLS Q+RR+ A ++++ K+++ ++D GEP EG+VI+ +G++ V S Sbjct: 9 KKLSDQQKRRIEAIRERRMNRKQAKSAEHAAEFDAQGLGEPREGLVIAHYGLNVAVTSEG 68 Query: 59 GDVHRCNIRRTI-RSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVK 117 HRC +R T+ + V GDRV+WRP G+N +G++E + R++VL RP Y+ ++ Sbjct: 69 MAEHRCAVRETLPENPVCGDRVIWRP------GLNEQGVIEDIMPRSNVLRRPGPYNRLQ 122 Query: 118 PIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLL-DDEGMAFVNEQ 176 +AAN+D++++ ++ + ++DRYLVA IEP+I++NK+DL+ D+E + + Sbjct: 123 TLAANLDRLLVTTSAA-LFNPFLVDRYLVAASAANIEPVIIVNKMDLIRDEESLDDLAML 181 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 + Y+ + Y ++ VS+ T G+ L++ L+ +S F GQSGVGKSSL+ + + Sbjct: 182 LAPYQEMEYEIVPVSATTGQGMGELDDILSFGLSAFVGQSGVGKSSLVAHWID-DLSLRI 240 Query: 237 NDISDNSGLGQHTTTAARLYHFPHG-GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG 295 D++ ++G G+HTTT A LY G G +IDSPGVR FGL +EPE++ F + Sbjct: 241 ADVNAHTGKGRHTTTVAHLYPLKSGRGGIIDSPGVRAFGLHGVEPEEVIHHFRDLAPLAQ 300 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 C + DCKH+ +PGCA+ EA+E R E+YHRILES+ + + Sbjct: 301 QCHFNDCKHEQEPGCAVLEAIEHEIADAIRLESYHRILESILEEE 345 >UniRef50_C7R8R7 Sigma 54 interacting domain protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8R7_KANKD Length = 335 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 131/338 (38%), Positives = 201/338 (59%), Gaps = 6/338 (1%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 M+K + ++ R + Q K + D+ +P++GIVISRFG D+ + + Sbjct: 1 MAKPEKKSSKRWRKKPDKQATYIKEKVDRNIDEESLLDPEQGIVISRFGQQVDIADENFE 60 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 RC +R++ V GDR +R K G++ + R S+L RP + GVKP+A Sbjct: 61 TIRCFLRKSNEVPVVGDRAWFRRQKELP-----TGVLVELEPRRSLLKRPTPHHGVKPVA 115 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANID I ++ A P S ++DRYLVA ++ ++ I++NK D +D+E + +++ +Y Sbjct: 116 ANIDLIALLLAPEPAFSEVLLDRYLVAAQSSELPVWIIMNKWDTVDNEEKESIKKRLQLY 175 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 +++GY + +S++T +G++ L LTG+ + AGQSGVGKS+L+ L EI T ++S Sbjct: 176 QDLGYPIYYISANTGEGVEQLVRNLTGKQLLLAGQSGVGKSTLIGYLFP-NMEIATGEVS 234 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 SGLG HTTTA+RLY ++DSPGVREFGLWHLE I QGF+E CK+R Sbjct: 235 GTSGLGTHTTTASRLYRLDAATYLVDSPGVREFGLWHLEDHDIKQGFIEISTIGEQCKFR 294 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 DCKH +PGCA+ A ++G IA +R +NY +++ Q Sbjct: 295 DCKHLNEPGCAVLAAAKDGAIAASRLKNYQHLIQHFDQ 332 >UniRef50_A0Z0P9 Ribosome-associated GTPase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0P9_9GAMM Length = 318 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 140/338 (41%), Positives = 194/338 (57%), Gaps = 20/338 (5%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MSK++LSK Q RR+ A +R S+ L GE G+VI+RFG +E +GD Sbjct: 1 MSKSQLSKQQNRRIQAAQERYRSESE--------LGGES--GLVIARFGKQVLIEEENGD 50 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 +RR V GD+VVW P G++EA+ R ++++RP+ ++PIA Sbjct: 51 RRTTTLRRRAEDPVAGDQVVWTPQ-------GEHGVIEALLPRRTIISRPNSQGALRPIA 103 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANID+++IV A P N+IDRYLVA I+ +++NK DLL + V + + Y Sbjct: 104 ANIDRLLIVIAPQPLAQANLIDRYLVAASHAGIDASLIVNKADLLSEA--PSVVQLAETY 161 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 +G V+ + G + L + + + GQSGVGKSSL+ LL EI +S Sbjct: 162 SELGVEVVTTGQLSDPGAETLMDMVATQTVALVGQSGVGKSSLIKRLLP-DLEIRIGALS 220 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 D GLG+HTTTAA LYH P GG +IDSPGVREF L HL + I GFVEF LGLC++R Sbjct: 221 DAVGLGRHTTTAAALYHLPGGGRLIDSPGVREFHLSHLPKDAIESGFVEFEPLLGLCRFR 280 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 DC H + CA+ EA E G+I+ R +Y +I+ SM+Q Sbjct: 281 DCSHSHEVRCAVLEAHERGEISSDRLASYRQIVASMSQ 318 >UniRef50_C5S7F8 Ribosome small subunit-dependent GTPase A n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7F8_CHRVI Length = 333 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 139/337 (41%), Positives = 196/337 (58%), Gaps = 11/337 (3%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPD---YDDNLFGEPDEGIVISRFGMHADVESA 57 M+K +LS Q R+ A +RR + +P+ + + EP+EG V+ R G + VE A Sbjct: 1 MAKRRLSARQIERIQAIQERRRERLAARPERALAELDDELEPEEGRVVVRHGANLAVEDA 60 Query: 58 DGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVK 117 G + C R+ I +V GDRVVW+ + +G+V A R S L+RPD+ K Sbjct: 61 HGHLIHCLARQNIGHVVCGDRVVWQRLP------DGQGVVTATLPRISTLSRPDYSGRDK 114 Query: 118 PIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD-EGMAFVNEQ 176 P+AAN+ ++ I+ A PE S +ID+YLVA E + +E I+V NK+DLL E A + Sbjct: 115 PLAANLTRLAILIAPEPEPSGYLIDQYLVAAELIGVEAILVGNKMDLLAGAEERAAFQTR 174 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 Y IGYR +S + + L L+G+ S+ GQSGVGKSSL+ LL Q EI Sbjct: 175 FAHYGAIGYRTFWISLLEPESIGGLVAELSGQTSVLVGQSGVGKSSLVKLLLPDQ-EIQI 233 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 +S +GLG+HTT+AA Y G +IDSPGVR F L ++ + QGF EF +LG Sbjct: 234 GRLSQATGLGRHTTSAATCYRLSGDGFLIDSPGVRSFRLGDIDRHGLQQGFREFRPHLGR 293 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 C++ DC+HD +P CAIR+AVE+G IA R N+H +L Sbjct: 294 CRFGDCRHDQEPDCAIRQAVEDGLIAPERLANFHHLL 330 >UniRef50_B0NH56 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH56_EUBSP Length = 292 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 95/306 (31%), Positives = 147/306 (48%), Gaps = 21/306 (6%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 +G ++ V + V+ C + R + GD V+ A + G Sbjct: 2 QGKIVKGIAGFYYVHVVESGVYECKAKGVFRKEKIKPLVGDNVIIE----ALDEEQKTGN 57 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEP 155 + V +R + L RP ANIDQ ++V A + P N++DR+LV E+ +I Sbjct: 58 ITEVLKRKNELVRPA--------VANIDQALVVFAIVRPNPHFNLLDRFLVMMESKEIPV 109 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 I+ NK D+ D V E IY N GY ++ S+ + ++E L G+ + AG Sbjct: 110 ILCFNKEDIATDPQ---VKELEAIYENCGYPLIFTSALKDKNIDQVKEVLRGKTTAIAGP 166 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSS++N L + + T IS G+HTT L+ ++D+PG + Sbjct: 167 SGVGKSSIINILQP-EANMETGAISSKIERGKHTTRHTELFPVDADSYIMDTPGFSSLYV 225 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 E E++ F EF Y G CK+ C H +PGCA++EAVEEGKI + R++NY + E Sbjct: 226 NDFEKEELKYYFPEFAVYEGTCKFNGCDHIHEPGCAVKEAVEEGKIHKVRYQNYIEMYEE 285 Query: 336 MAQVKT 341 + + Sbjct: 286 LKNKRR 291 >UniRef50_A7Z4J8 Putative ribosome biogenesis GTPase rsgA n=31 Tax=Bacilli RepID=RSGA_BACA2 Length = 296 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 104/311 (33%), Positives = 157/311 (50%), Gaps = 23/311 (7%) Query: 39 PDEGIVISRFGMHADVESA-DGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 EG +I V + +C R R + GD V++ + Sbjct: 1 MPEGKIIKALSGFYYVLDESQDKIIQCRGRGIFRKNKITPLVGDYAVYQAEN------DK 54 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQ 152 +G + + ERT+ L RP +N+DQ V+V A+ P S +++DR+LV E Sbjct: 55 EGYLLEIKERTNELIRP--------PISNVDQAVLVFSAVQPAFSTSLLDRFLVLVEANG 106 Query: 153 IEPIIVLNKIDLLDD-EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISI 211 I PII + K+DL D E + + Y+ IGY V + SS GL + + + ++ Sbjct: 107 IHPIICITKMDLAADGESKEAILSYVKDYQAIGYDVYVTSSKENSGLTGIVKHFENKTTV 166 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 FAGQSGVGKSSLLNA+ + E+ TN+IS + G G+HTT L H GG V D+PG Sbjct: 167 FAGQSGVGKSSLLNAISP-ELELKTNEISTHLGRGKHTTRHVELIH-TSGGLVADTPGFS 224 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 +E E++ F E + CK+R C H +P CA+++AVEEG+I R+E+Y Sbjct: 225 SLEFTGIEEEELGSTFPEIREISASCKFRGCLHLKEPKCAVKQAVEEGEIQPYRYEHYKE 284 Query: 332 ILESMAQVKTR 342 ++ + + K R Sbjct: 285 FMQEIKERKPR 295 >UniRef50_A1AWN3 Ribosome small subunit-dependent GTPase A n=2 Tax=sulfur-oxidizing symbionts RepID=A1AWN3_RUTMC Length = 318 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 125/331 (37%), Positives = 188/331 (56%), Gaps = 17/331 (5%) Query: 8 KGQQRRVNANHQRRLKTSKEKPDYDDNL---FGEPDEGIVISRFGMHADVESADGDVHRC 64 Q+ R+ R+ + + + + L + G+VI+R+G V++ G++++C Sbjct: 2 HHQKWRLKKTQVERIARTNKASNNFEELPVNTNKKQTGLVITRYGQRLLVKANSGELYQC 61 Query: 65 NIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANID 124 RR I + GD+V+++ + +GIV A+ +R + L R K IAANID Sbjct: 62 TARRNIDLSIAGDQVIFQITQSN------QGIVTALIKRHNQLHR-----AHKLIAANID 110 Query: 125 QIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 Q+ +V+AI P +IDRYLV E ++ IV+NKIDL D M + +Y NIG Sbjct: 111 QLWLVAAIEPHYQFELIDRYLVVAENAKLPINIVVNKIDLASD--MKKIKFDFSMYENIG 168 Query: 185 YRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSG 244 Y V +S Q + L+ L + +IF GQSGVGKSSL+N L+ + N+IS S Sbjct: 169 YSVNYLSVKKQININQLKTQLNKKSNIFLGQSGVGKSSLINELIP-NLNLGVNEISAKSK 227 Query: 245 LGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKH 304 LG+HTTT LY+ P GGD+IDSPG+REF L L ++I GF EF + CK+R+C H Sbjct: 228 LGKHTTTNTILYNIPSGGDLIDSPGIREFQLDELINQEILNGFKEFKPLINACKFRNCAH 287 Query: 305 DTDPGCAIREAVEEGKIAETRFENYHRILES 335 +P CAI+ AV+ GKI + R+++Y ++ S Sbjct: 288 IFEPKCAIKLAVKSGKIHQKRYQSYLTLVSS 318 >UniRef50_A1HMW6 Ribosome small subunit-dependent GTPase A n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMW6_9FIRM Length = 291 Score = 333 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 162/305 (53%), Gaps = 24/305 (7%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIV 97 G+V+ + + V++ D + C +R + SL+ GD V + P KG++ Sbjct: 4 GVVVKAYNSYYYVQTGD-KLTMCTLRGRFKKERFSLLVGDEVEYLPLDE------GKGVI 56 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPI 156 E + R S+L RP + AN+DQ+++ A P+ S IIDR+L+ E Q+ Sbjct: 57 ETILPRRSMLKRP--------MVANVDQVILTFAAASPDPSFVIIDRFLILAELSQLNAQ 108 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I LNKIDL D A + + +D+YR IGY VL S T G+ L L GRI++FAG S Sbjct: 109 ICLNKIDLAD---AAEIGQIVDLYRKIGYSVLETSVKTGQGIDELRRQLYGRITVFAGPS 165 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKSSLLNA+ ++T +IS G G+HTT A L GG V+D+PG Sbjct: 166 GVGKSSLLNAVEPG-LSLVTGEISIKIGRGKHTTRFAELLPLAGGGFVVDTPGFSFTEFA 224 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + P ++ + F E CK+ C H +P CA+++AV +G IA +R+ +Y +L + Sbjct: 225 DIVPTELARAFPEIAAAAPACKFNTCLHHKEPQCAVKQAVTDGCIAASRYASYLEVLSEV 284 Query: 337 AQVKT 341 + + Sbjct: 285 QENRK 289 >UniRef50_C0YJK5 GTP-binding protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJK5_9FLAO Length = 308 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 100/314 (31%), Positives = 162/314 (51%), Gaps = 19/314 (6%) Query: 41 EGIVISRFGMHADV-ESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGV 91 +G +I G V E + IR + L GD V ++ + Sbjct: 2 KGKIIKSTGSWYQVLELETNKIFEARIRGKFKLIKTRLTNPLAVGDFVEFQLEQDDIAW- 60 Query: 92 NVKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQI-VIVSAILPELSLNIIDRYLVAC 148 + + R++ L R + IA+NID I + PE SL +DR+L C Sbjct: 61 -----ITKIEPRSNYLIRKSVNLSKEAHIIASNIDLACFIFTLKHPETSLGFLDRFLACC 115 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E I P+I+ NKID+L +E + V + +Y+ IGY L +SS+++ L L+E L + Sbjct: 116 EAYNITPLILFNKIDVLHEEEIEIVKDIEFLYQEIGYNTLEISSYSKLNLDQLQEILKDK 175 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 S+F G SG GKS+L+NAL + T++ISD G+HTTT A+++ + GG+VID+P Sbjct: 176 TSVFFGHSGCGKSTLVNALQPG-LNLKTSEISDTHLKGKHTTTFAQMHFWDFGGNVIDTP 234 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 GVREF + +E E++ F E CK+ +C H +P CA+ +A+E G+I +R+ Sbjct: 235 GVREFAMIDIEKEEVQHYFPEIFKKREECKFHNCLHVNEPKCAVIDALETGEIQHSRYAT 294 Query: 329 YHRILESMAQVKTR 342 Y ++++ + + Sbjct: 295 YIKLMDEAEEASQK 308 >UniRef50_B1YIP8 Ribosome small subunit-dependent GTPase A n=2 Tax=Exiguobacterium RepID=B1YIP8_EXIS2 Length = 301 Score = 332 bits (853), Expect = 8e-90, Method: Composition-based stats. Identities = 115/315 (36%), Positives = 163/315 (51%), Gaps = 22/315 (6%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVH---RCNIRRTIRSLVTGDRVVWRPGKPAAE 89 +N + EG +I G DV + G++ R N R+ S V GD VV Sbjct: 3 ENRIEDNREGTIIRLQGGFYDVMTPQGEIRSRARGNFRKRGISPVVGDEVVLHIESE--- 59 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVAC 148 G + V +R + L RP ANIDQ +++VSA P+ S +++DR+LV Sbjct: 60 ----TGYILEVKDRQNFLVRP--------PVANIDQALLVVSAAEPDFSAHLLDRFLVLI 107 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E +I+PII+L K+DLL E V+E + YR IGY+V+ SS T G++ + L + Sbjct: 108 EAKEIQPIIILTKMDLLQGEAEQHVSEAIAAYRTIGYQVIETSSETLTGVESVRPLLKDK 167 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 S+ AGQSGVGKSSLLNAL + T+ IS G G+HTT L G + D+P Sbjct: 168 TSVLAGQSGVGKSSLLNALEPS-LALETSHISKALGRGRHTTRHVTLMPL-GDGLIADTP 225 Query: 269 GVREFGLWH-LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 G H +E E++ F EF CKYR C H +PGCA+++AVE +I +R+ Sbjct: 226 GFSNLDFPHEMELEELRWCFPEFVALQDDCKYRGCLHLNEPGCAVKQAVEAHEIMSSRYT 285 Query: 328 NYHRILESMAQVKTR 342 NY +E + R Sbjct: 286 NYGMFVEEIKNRTRR 300 >UniRef50_B8GPJ8 Ribosome-associated GTPase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPJ8_THISH Length = 289 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 123/296 (41%), Positives = 171/296 (57%), Gaps = 8/296 (2%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 G V++RFG +E G RC RR ++ V GDRV W P + +V Sbjct: 2 THTGRVVTRFGAELVIEDETGQRRRCTSRRRLQDAVCGDRVEWSPSDSGND------VVS 55 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIV 158 A+ R ++L R D +P+AAN+DQ+V+V A P ++DRYLVA E L ++V Sbjct: 56 AILPRHNLLQRLDPRGQTRPVAANLDQVVVVIARRPPPQWPLVDRYLVAIEHLDARALLV 115 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 +NK DL D + YR +GY +L S+ GL L L R SI GQSGV Sbjct: 116 VNKADLEPDPADPQPG-MEERYRQLGYPMLHTSASAGLGLDDLRGELKDRTSILVGQSGV 174 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKSSL+ ALL + + ++S+ +G G+HTTTAA LYH P GGD+IDSPGVR+F L Sbjct: 175 GKSSLIQALLPGE-SLRIGEVSEATGEGRHTTTAASLYHLPGGGDLIDSPGVRDFTPPPL 233 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 E + +GFVEF YLG C++ +C HD +PGCAI+ AV+ G+I+ R+ +Y + + Sbjct: 234 PAEALARGFVEFRPYLGQCRFHNCNHDREPGCAIKAAVDAGEISGERYRSYLAMKK 289 >UniRef50_C1ABL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RSGA_GEMAT Length = 307 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 156/294 (53%), Gaps = 18/294 (6%) Query: 53 DVESADGDVHRCNIRRTIRS-------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTS 105 +V + G+ ++R ++ L GDRV AE + +H RTS Sbjct: 18 EVYTEQGERFSASMRGRLKHEAHGALKLAVGDRVTIARDAQHAETWA----ITDIHPRTS 73 Query: 106 VLTR--PDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKI 162 L R P G + + AN+DQ+++V A P+ ++DR+LV E + IV+NK Sbjct: 74 KLARRMPGGRYGERIVVANLDQVLVVFAAARPDPHPRMLDRFLVIAEANGLSARIVINKA 133 Query: 163 DLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSS 222 DL+ E A + GY V S HT +GL+ L + + R S +G SGVGKSS Sbjct: 134 DLVSPEVSAAL---FADQMAAGYPVHHTSIHTGEGLEALRDEVEHRSSALSGPSGVGKSS 190 Query: 223 LLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQ 282 L+NAL ++ T +SD G+HTT A L+ PHGG + D+PG+RE GLW +E Q Sbjct: 191 LMNALFPG-LDLRTAAVSDAVNKGRHTTVGAMLHPLPHGGFIADTPGLREVGLWGIEAGQ 249 Query: 283 ITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + F EF L C++ DC H +PGCA+REAVE G ++ R+E+Y ++ + + Sbjct: 250 VASCFPEFRPLLSACRFADCIHTVEPGCAVREAVEAGDVSPGRYESYVKLRDEL 303 >UniRef50_A6TRW0 Putative ribosome biogenesis GTPase rsgA n=15 Tax=Bacteria RepID=RSGA_ALKMQ Length = 292 Score = 329 bits (844), Expect = 9e-89, Method: Composition-based stats. Identities = 89/306 (29%), Positives = 163/306 (53%), Gaps = 22/306 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 +G +I VE + +V+ C R +R + GD V + N KG+ Sbjct: 3 KGKLIKGIAGFYYVEV-NKEVYECKGRGILRKKKLTPLVGDYVEIT----VTDEDNKKGM 57 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 ++ + R + L RP AN+DQ+++V ++ P+ L+++D +L+ ET I+ Sbjct: 58 IDDIFPRKTELIRPT--------VANVDQVIVVFSVTQPDPHLSLLDHFLILAETQNIDV 109 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +I LNK+DL+ E +A E + IY +GY V++ S + GL+ LE+ L G+ ++FAG Sbjct: 110 VICLNKLDLVQREDVA---ELVGIYEKVGYPVILTSQNDSIGLEQLEKVLRGKTTVFAGP 166 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKS+LLN +L + T ++S G+HTT L G V+D+PG + Sbjct: 167 SGVGKSTLLNRILP-HVTLQTGELSSKIARGKHTTRHVELISLETEGWVVDTPGFSSLNI 225 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 L+ E++ F++F + C++ C H +P C ++ A++ G++ ++R+ +Y +++ Sbjct: 226 DFLKEEELADYFIDFEPFAKDCRFLSCVHLNEPICGVKTALKAGQLVQSRYNSYLQMIGE 285 Query: 336 MAQVKT 341 + + + Sbjct: 286 IKKNRR 291 >UniRef50_Q60BE0 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q60BE0_METCA Length = 299 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 117/293 (39%), Positives = 166/293 (56%), Gaps = 10/293 (3%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAV 100 +G V+ G VE G + C+ RR + GD V W P + +G V V Sbjct: 6 QGRVVCHLGKGLAVEDETGRIVLCHTRRRLGDAAVGDHVRWEPCE------GDQGRVLEV 59 Query: 101 HERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN 160 R S L RP V+ +AAN+D++ +V A PE + D+ L CE I ++LN Sbjct: 60 LPRRSSLVRPAHGGRVRVVAANLDRVFVVLAPEPEPDWLLADQILAVCEYRHITAALILN 119 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220 KIDL+ G + + + Y GY V +S+ T GL L L S+ +GQSGVGK Sbjct: 120 KIDLV---GASALERALRDYEAAGYEVFRISTRTGAGLDALRSMLHTGCSMLSGQSGVGK 176 Query: 221 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP 280 SSL NALL + + ++S +SGLG+HTTT+A LY P GG++IDSPGV FGL ++P Sbjct: 177 SSLTNALLP-DRNLRIGELSAHSGLGRHTTTSATLYSLPGGGELIDSPGVAVFGLAEVDP 235 Query: 281 EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 ++ Q + +FH YLG C++ DC+H D GCA+REAVE G ++ R+E Y ++L Sbjct: 236 TELAQTYRDFHPYLGKCRFNDCRHVRDKGCAVREAVEAGTLSPARYERYLKLL 288 >UniRef50_A5EV96 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Cardiobacteriaceae RepID=RSGA_DICNV Length = 316 Score = 327 bits (838), Expect = 5e-88, Method: Composition-based stats. Identities = 110/332 (33%), Positives = 170/332 (51%), Gaps = 20/332 (6%) Query: 4 NKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHR 63 +KLS QQRR++ + Q +L D +V++ G V+ G++ Sbjct: 2 SKLSHQQQRRIHNHRQNKLAAGDRA-----------DAALVVAHLGYQLIVDD-HGEILA 49 Query: 64 CNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANI 123 + R+ + ++ DRV+ +P IVE ++ R L +KP+A+NI Sbjct: 50 ADWRQKLGAIAVNDRVLITRDQPQH------AIVEGIYPREKTLY-KQHAGKLKPVASNI 102 Query: 124 DQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI 183 DQ++I A +P+ ++DR+LVA IEP NK DL D + A ++ IY + Sbjct: 103 DQLLITFAPVPDWQNALLDRFLVAAHQAHIEPAFFCNKSDLFDAQTFAAAENRLAIYHQL 162 Query: 184 GYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNS 243 GYRV S + + GL+ L L+GR ++ GQSGVGKSS ++ L+ ++ T +S Sbjct: 163 GYRVFYGSIYQKTGLEELTHWLSGRQTVICGQSGVGKSSFIHYLMP-DIDVWTQAVSAAR 221 Query: 244 GLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 G GQHTT AR Y +ID+PGVR F L HL+ ++ GF E H Y C++ DC Sbjct: 222 GFGQHTTRNARRYPLDAHTAIIDTPGVRGFSLTHLQHSEVVSGFPEIHQYTHECRFNDCS 281 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILES 335 H +P C ++ A+E G I+ RF + +I Sbjct: 282 HQHEPDCGVQRALERGDISLERFNSMMQICAE 313 >UniRef50_C9KJ38 Ribosome small subunit-dependent GTPase A n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ38_9FIRM Length = 298 Score = 327 bits (838), Expect = 5e-88, Method: Composition-based stats. Identities = 97/317 (30%), Positives = 154/317 (48%), Gaps = 32/317 (10%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS------LVTGDRVVWRPGKPAAEGVNVK 94 EG VI + V + G + C +R + +V GDRV + Sbjct: 3 EGRVIKAYNSFFYVMTEAG-LVSCKLRGKFKKRRQSTGVVPGDRVAIELLP------DGT 55 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQI 153 G++E R ++L RP AN+ Q+++ A P+L +++R+LV E I Sbjct: 56 GVIEQQLPRVNLLRRPA--------VANLTQVILTFAAAAPDLHPLLLNRFLVLAEWSGI 107 Query: 154 E-PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 +I +NK+DL + + + Y IGY V+ VS+ T G+ L L G +S+F Sbjct: 108 PKIVICVNKMDLHEGP----WQDFLRDYETIGYPVVRVSAQTGQGIDVLRSRLRGEVSVF 163 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SGVGKSSLLN + + T +S+ G+HTT A L + GG ++D+PG Sbjct: 164 AGPSGVGKSSLLNQ-VNPALTLATGHVSEKIKRGRHTTRVAELLPYE-GGYIVDTPGFSA 221 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + L+ + F EF Y G C++ C H +PGCA++ AVEE I R++ Y +I Sbjct: 222 MEMAELQVTDLPHYFPEFRPYEGACRFSPCSHTHEPGCAVKAAVEERSITRERYDAYEQI 281 Query: 333 LESMAQVK---TRKNFS 346 L+ + + + +K + Sbjct: 282 LQEVKEAQMLARKKEYK 298 >UniRef50_Q8R9T7 Putative ribosome biogenesis GTPase rsgA n=16 Tax=Clostridia RepID=RSGA_THETN Length = 295 Score = 327 bits (838), Expect = 5e-88, Method: Composition-based stats. Identities = 93/311 (29%), Positives = 157/311 (50%), Gaps = 25/311 (8%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 E +G ++ V + G + C R R + GD + Sbjct: 2 ERIQGRIVRGIAGFYYVATERG-IIECRARGKFRKDNIIPLVGDIAEVQLVNE------K 54 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 +G + + R + L RP AN+DQ +IV AI PE++ ++D+ +V E + Sbjct: 55 EGYILEILPRKNQLVRP--------PVANVDQAIIVFAISKPEINRVLLDKMIVVAEINK 106 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 IEP++ +NK+D+ E V +++YR IGY+ + S+ T +G++ L+ L +IS F Sbjct: 107 IEPVVCINKVDM---EKREEVENLINVYRKIGYKAVGTSAVTGEGMEELKSYLKDKISFF 163 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SGVGKSSL+N L+ + T ++S+ G G+HTT + GG V+D+PG Sbjct: 164 AGPSGVGKSSLIN-LIQSNIRLKTGELSEKLGRGRHTTRSVEFLPLDFGGYVLDTPGFTA 222 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + + E++ F EF ++ C++ C H +P CA+ EAV+EG I R+ +Y + Sbjct: 223 LEI-DIPKEELRNYFREFIEFQENCRFNSCLHVNEPDCAVTEAVDEGIIDRQRYISYLTL 281 Query: 333 LESMAQVKTRK 343 L + + + R+ Sbjct: 282 LREVKEKEKRR 292 >UniRef50_Q3AC25 Putative ribosome biogenesis GTPase rsgA n=9 Tax=Clostridia RepID=RSGA_CARHZ Length = 290 Score = 326 bits (837), Expect = 5e-88, Method: Composition-based stats. Identities = 94/306 (30%), Positives = 157/306 (51%), Gaps = 24/306 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 EG+V+ + V++ ++ C R + ++TGDRV+ R P +E G+ Sbjct: 2 EGLVVKNYAGFYYVDTGKA-IYMCKARGKFKKDNIKILTGDRVIIRELVPNSE-----GV 55 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEP 155 +E++ R + L RP AN+DQ+++V A P S +IDR LV L++E Sbjct: 56 IESLLPRKNELIRP--------PIANVDQVLLVFAFADPFPSTELIDRLLVMAYALRLEV 107 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++V NK DL++ E + + Y+ I +V+ +++ G+ L + L +IS+ AG Sbjct: 108 VLVFNKFDLVNPES----QKLFEYYKKILPKVVAITARGDTGIDELTDYLNQKISVLAGP 163 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKS+L+N L+ K + T ++S G+HTT L P GG + D+PG L Sbjct: 164 SGVGKSTLINRLVPGAK-LATGEVSPKIKRGRHTTRHVELIKLPFGGFIADTPGFSNLTL 222 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 ++ ++ F EF+ C + +C H +P C +RE +E G+I R+ENY LE Sbjct: 223 PEMDKLELQSYFPEFNQNRKYCYFPNCLHVKEPNCRVRELLETGEIPPFRYENYLTFLEE 282 Query: 336 MAQVKT 341 + + Sbjct: 283 ITSDER 288 >UniRef50_A8FD43 Putative ribosome biogenesis GTPase rsgA n=131 Tax=Firmicutes RepID=RSGA_BACP2 Length = 298 Score = 326 bits (837), Expect = 5e-88, Method: Composition-based stats. Identities = 111/313 (35%), Positives = 159/313 (50%), Gaps = 25/313 (7%) Query: 39 PDEGIVISRFGMHADVESAD---GDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGV 91 EG +I V G V +C R R + GD VV++ Sbjct: 1 MPEGKIIKALSGFYYVLDESQESGKVVQCRARGIFRKNKITPLVGDYVVYQADN------ 54 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACET 150 + +G + V ERT+ L RP +N+DQ V+V A P S +++DR+LV E Sbjct: 55 DKEGYLLEVKERTNELVRP--------PISNVDQAVLVFSAAEPTFSTSLLDRFLVLVEA 106 Query: 151 LQIEPIIVLNKIDLL-DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 IEPII + K+DLL DE + D YR IGY V + S+ DG++ L +I Sbjct: 107 NHIEPIICITKMDLLKTDEERETIMAYADDYRQIGYEVHLTSTIEGDGIEKLTPHFHNKI 166 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 ++FAGQSGVGKSSLLNA+ + + T+DIS + G G+HTT L +G + D+PG Sbjct: 167 TVFAGQSGVGKSSLLNAMSP-ELALKTDDISSHLGRGKHTTRHVELIRTANG-LIADTPG 224 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +E E + F++ D G CK+R C H +PGCAI++AVE +I E R+++Y Sbjct: 225 FSSLEFTGIEAEDLGLYFLDIRDRSGDCKFRGCLHVKEPGCAIKDAVEHDQIKEYRYQHY 284 Query: 330 HRILESMAQVKTR 342 L + K R Sbjct: 285 LEFLTEIKDRKPR 297 >UniRef50_B5JX14 Ribosome small subunit-dependent GTPase A n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX14_9GAMM Length = 303 Score = 326 bits (837), Expect = 7e-88, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 176/304 (57%), Gaps = 11/304 (3%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 G VI+ FG H V + G + + + RR + +V GD V++ P + +V+ Sbjct: 5 QHGRVIANFGRHLSVRTQAGQLVKASARRKLGLVVCGDHVLFDPS-------GDEAVVQQ 57 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 V R VL RPD KP+AAN+DQ+ +VSA P + +ID YLV + + +E +++ Sbjct: 58 VQPRHGVLARPDRRGENKPLAANLDQLFVVSAHKPGIDRFLIDSYLVTAKLMGVEAVLLF 117 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 NK DL + + +N + Y ++GYR L S+ + GL+ L + + +I GQSGVG Sbjct: 118 NKDDL--EHDVDALNNTLQYYEDLGYRCLRTSAQSGQGLEKLMDQARDKANILVGQSGVG 175 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KSSL+ LL I +S++SGLG HTTT LY GG++IDSPGVREF W + Sbjct: 176 KSSLIQYLLP-DLSIQVGALSESSGLGSHTTTTTILYQLGDGGELIDSPGVREFATWTQD 234 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 +QI +GF E D C++ +C+H +PGCA+++A+EE + AE R+++Y ++L A+ Sbjct: 235 EQQILKGFKEIADLGQYCRFHNCRHLKEPGCAVKQAIEENECAEWRYQHYLKML-ERAED 293 Query: 340 KTRK 343 R+ Sbjct: 294 AQRE 297 >UniRef50_A5WDM1 Ribosome small subunit-dependent GTPase A n=4 Tax=Moraxellaceae RepID=A5WDM1_PSYWF Length = 374 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 134/383 (34%), Positives = 202/383 (52%), Gaps = 62/383 (16%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESAD-- 58 + + KL+K Q RR++ +++ G +G+V++ +G +V+ Sbjct: 4 IRQRKLTKQQLRRIDKQQ----------AQQQESIDGSLMDGVVMAHYGKQLEVQVTSLP 53 Query: 59 -----------------------GDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 GD+ RC++R + + TGD+V W A+ G Sbjct: 54 TLIPERPEVVEGEPEPFWQAIELGDIWRCHVRTNLPMIATGDKVRW-----VADPNTGFG 108 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 +E+V RTS+++RPD Y +KP+AAN+D + IV A LP + N+IDRYLV C ++P Sbjct: 109 RIESVQPRTSLISRPDRYHKLKPVAANVDILAIVFAPLPAAAPNLIDRYLVVCHHADVKP 168 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS----------------HTQDGLK 199 ++VLNK DLL E AF +D Y+N+GY ++ ++ Q GL Sbjct: 169 LLVLNKADLLSIEDYAFTQALLDEYQNLGYETVLTAAPCPENILHGAQSEDQPKAQLGLS 228 Query: 200 PLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L++ + ++ IFAGQSGVGKS+L+NALL E N IS NS LGQHTTT +RL F Sbjct: 229 DLQQKIKDKLVIFAGQSGVGKSTLVNALLP-DSEQSVNVISTNSKLGQHTTTTSRLLPFN 287 Query: 260 HG----GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHD-TDPGCAIRE 314 G ++D+PG+RE+G+WHL P+ I GF+E C++RDCKH GCA+ E Sbjct: 288 RDDLTQGGIVDTPGIREYGIWHLTPDDIIAGFIELSALAADCQFRDCKHTYNSKGCALWE 347 Query: 315 AVEEGKIAETRFENYHRILESMA 337 AV EG++ + R E+ + Sbjct: 348 AVAEGRVLQRRVESLVTLQAEAD 370 >UniRef50_C9R7Y8 Ribosome small subunit-dependent GTPase A n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y8_AMMDK Length = 292 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 155/306 (50%), Gaps = 22/306 (7%) Query: 42 GIVISRFGMHADVESAD-GDVHRCNIRRTI--RSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 G +I G A V D G V R + ++ GD V + P +G++E Sbjct: 3 GQIIRIHGGFAFVRDPDTGKVWTALRRGKLAEEKILVGDLVEFSPLDE------ERGVLE 56 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPII 157 V R + L RP AN++Q ++V A P+ + ++DR+LV ++ +I+PII Sbjct: 57 KVLPRKTELYRP--------PVANVEQALLVFAFTEPDPNFKLLDRFLVLSQSAKIKPII 108 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSG 217 NK+DL E+ Y G+ L VS+ T GL+ L+ L+ R+++ AG SG Sbjct: 109 CFNKLDLASP---GLYQEERRAYEEAGFVFLAVSAKTGQGLEELKRHLSHRVTVLAGPSG 165 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 VGKSSLLNA+ ++ T +S +G G+HTT L GG V+D+PG L Sbjct: 166 VGKSSLLNAIQPG-LKLQTAPVSRKTGRGRHTTRLVELLPLDIGGLVVDTPGFTSLDLPD 224 Query: 278 LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 + P ++ F E C++ DC H +PGCA+REAV EGKI R+++Y L + Sbjct: 225 IPPASLSAYFPEIARVGAGCRFSDCLHQAEPGCAVREAVAEGKIPRFRYQHYLVFLGEIL 284 Query: 338 QVKTRK 343 + + RK Sbjct: 285 ERERRK 290 >UniRef50_A6GW90 Putative ribosome biogenesis GTPase rsgA n=25 Tax=cellular organisms RepID=RSGA_FLAPJ Length = 326 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 101/305 (33%), Positives = 164/305 (53%), Gaps = 15/305 (4%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVN 92 GIV G V+S G C I+ R + GD V + + + Sbjct: 2 TGIVYKSTGSWYTVKSLQGHFMECRIKGKFRMKGIKSTNPIAVGDVVDYDLDENSDV--- 58 Query: 93 VKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACE 149 V G + +H+R + + R + + IA+N+D + ++ I P + N IDR+LV + Sbjct: 59 VTGTITKIHDRKNYIVRKSVNLSHQMHIIASNLDYVFLLITINNPPTTTNFIDRFLVTAQ 118 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 IE I+V NKID ++ + IY+ IGY+ L VSS G++ L+ + ++ Sbjct: 119 AYGIETILVFNKIDTYNEAMLDEQLFMQYIYQEIGYKCLRVSSTEGKGIEELKNIMKNKV 178 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 ++F+G SGVGKS+L+NA+ + T IS+ S GQHTTT A +Y G +ID+PG Sbjct: 179 TMFSGHSGVGKSTLVNAMEPT-LHLKTKTISEQSKQGQHTTTFAEMYDLSFGAQIIDTPG 237 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 ++ FG+ +E E+I+ F EF CK+ +C H +P CA+++A+E+ KI+ +R+ +Y Sbjct: 238 IKGFGIVDMEKEEISGYFPEFFKLKDQCKFNNCLHKDEPKCAVKDALEKDKISYSRYNSY 297 Query: 330 HRILE 334 +ILE Sbjct: 298 LKILE 302 >UniRef50_C4ZEV1 Putative ribosome biogenesis GTPase rsgA n=12 Tax=Firmicutes RepID=RSGA_EUBR3 Length = 302 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 88/316 (27%), Positives = 145/316 (45%), Gaps = 31/316 (9%) Query: 41 EGIVISRFGMHADVESAD----------GDVHRCNIRRTIRS----LVTGDRVVWRPGKP 86 G +I V + G ++ C + T R + GD V Sbjct: 2 TGKIIKGIAGFYYVYVEETKEAKETATGGTLYECKAKGTFRKQKIKPLVGDTVDI----A 57 Query: 87 AAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANID-QIVIVSAILPELSLNIIDRYL 145 + G VE + R + L RP +NID +VI ++ P+ + N++DR+L Sbjct: 58 VLDEEKHIGNVERILPRKNELIRPA--------VSNIDMALVIFASAKPDPNFNLLDRFL 109 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 E + I NK DL+ + E IY GYRV+ S+ T +G+ ++ L Sbjct: 110 CMMEYQHVPVTICFNKKDLITPQKQ---QELKSIYEPAGYRVMFTSTKTGEGIDEIKHVL 166 Query: 206 TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 GR + AG SGVGKSS++N L ++ T IS+ G+HTT + + G ++ Sbjct: 167 EGRTTTVAGPSGVGKSSIINCL-QDDVQMETGHISEKIERGKHTTRHSEIIPIKDGTYIM 225 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG + E E + + EF +Y C+++ C H +P C ++EA+ EGKI++ R Sbjct: 226 DTPGFSSMDVPGFEKEDLWTCYPEFVEYEPYCRFQGCSHINEPDCGVKEALSEGKISQVR 285 Query: 326 FENYHRILESMAQVKT 341 ++NY + E + + Sbjct: 286 YDNYKLLYEELKNRQK 301 >UniRef50_Q11RI7 Putative ribosome biogenesis GTPase rsgA n=3 Tax=Sphingobacteriales RepID=RSGA_CYTH3 Length = 307 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 164/306 (53%), Gaps = 16/306 (5%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSL--------VTGDRVVWRPGKPAAEGVN 92 +GI+ G V++ DG + +R + L GD V Sbjct: 2 KGIIYKSTGSWYLVKAEDGTYYNARLRGKFKHLDLKVTNPLSVGDFVDMNIDPLTP---- 57 Query: 93 VKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQ-IVIVSAILPELSLNIIDRYLVACE 149 + ++ + RT+ + R + IA NIDQ I++V+ P+ S+ IDR+L++CE Sbjct: 58 TEAMIFNIEPRTNYIIRRSSHKTAFGHLIACNIDQSILLVTLKQPKTSIGFIDRFLISCE 117 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 +I +IV NK DL ++ M D+Y +GYR ++ S ++GL L L +I Sbjct: 118 AFRIPAVIVFNKSDLYNEALMEEYLYLKDVYEPLGYRCILTSMEKENGLDELMPLLQNKI 177 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 S+ +G SGVGKS+L+N + Q +I T+ ISD+S G+HTTT A +Y VID+PG Sbjct: 178 SVVSGHSGVGKSTLINKIFP-QLDIKTDIISDHSQKGKHTTTFAEMYDLNETSKVIDTPG 236 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 ++E GL+ +E + ++ F E +G C++ +CKH +PGC ++E VE KIA TR+E+Y Sbjct: 237 IKELGLFEIENDVLSHYFPEMRSLMGQCRFHNCKHTNEPGCRVKEYVEAFKIAPTRYESY 296 Query: 330 HRILES 335 I+ Sbjct: 297 CSIIFE 302 >UniRef50_B8FYJ7 Ribosome small subunit-dependent GTPase A n=17 Tax=Bacteria RepID=B8FYJ7_DESHD Length = 365 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 88/320 (27%), Positives = 163/320 (50%), Gaps = 22/320 (6%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWR-PGKPAAEGVN 92 G V + + V + G+V + +R GD VV + + + Sbjct: 31 GRVAAEYRDRFKVWTEFGEVW-AVVSGKMRYTALERSDFPAVGDWVVLEGRAESIKDHED 89 Query: 93 VKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACET 150 I++++ R S +R + +A NID + +V+A+ + ++ I+RYL Sbjct: 90 QDVIIQSILPRKSKFSRKAAGKTSAEQIVATNIDTVFLVNALNFDFNVRRIERYLTLAWE 149 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI--GYRVLMVSSHTQDGLKPLEEALT-G 207 P++VL+K DL DD V E++ ++ G +L +S T DG+ + + G Sbjct: 150 SGANPVLVLSKTDLCDD-----VQEKVSQVQDAAPGVDILPISCATGDGVSAIAPYIRQG 204 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 + G SG GKS+L+N LLG ++ T ++ + G+HTTT+ L+ P GG +ID+ Sbjct: 205 QTIALLGSSGAGKSTLVNYLLGQNVQL-TYEVREKDSRGRHTTTSRELFLLPQGGVLIDT 263 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+RE L+ E +++ F + Y G C++ DC+H+++PGCA+++A+ EG ++E R+E Sbjct: 264 PGMREIQLFG-SGEGLSEAFEDIAAYAGNCRFSDCQHESEPGCAVQKAIAEGMLSEERYE 322 Query: 328 NYHRILESMAQVKTRKNFSD 347 ++ ++ + + N + Sbjct: 323 SFKKLQREARYISRKTNLHE 342 >UniRef50_B8CXT2 Ribosome small subunit-dependent GTPase A n=2 Tax=Bacteria RepID=B8CXT2_HALOH Length = 367 Score = 323 bits (829), Expect = 5e-87, Method: Composition-based stats. Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 16/317 (5%) Query: 34 NLFGEPDEGIVISRFGMHADVESADGDV---HRCNIRRTIRSLVTGDRVVWRPGKPAAEG 90 N V + + + G+V +R + V GD V+ + Sbjct: 42 NNKENYQVARVAVEYKGIYKLYTEAGEVLGEITGKMRYNNKFPVVGDWVI-----ADLQS 96 Query: 91 VNVKGIVEAVHERTSVLTRPDFYDGVK--PIAANIDQIVIVSAILPELSLNIIDRYLVAC 148 + I+ + R S +R + +A+NID I IV+++ + +L I+RYL Sbjct: 97 GGKRAIIHDILPRKSKFSRNRAGSKTQEQIVASNIDTIFIVTSLNQDFNLRRIERYLTIA 156 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-G 207 P+++LNK DL D+ + +E I G + ++++ +G+ L+ G Sbjct: 157 WDSGANPVVILNKADLCDEIEVRK-SEVESI--AFGVPIYVIAALENEGVDQLKRYFKRG 213 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 G SGVGKS+L+N+LLG +K + N++ ++ G G+HTTT + GG +ID+ Sbjct: 214 ETVALLGSSGVGKSTLINSLLGKEK-MKVNNVREDDGKGRHTTTRREMILLDEGGIIIDT 272 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+RE LW + E I F + C + DC+H+++P CA+++A+EEG I E RF Sbjct: 273 PGMREIQLWDVS-EGIGNSFSDIEKLAQDCYFNDCQHESEPKCAVKKAIEEGIITEERFN 331 Query: 328 NYHRILESMAQVKTRKN 344 +Y ++ ++ +K Sbjct: 332 SYKKLQRERKYIEIKKE 348 >UniRef50_Q71YJ7 Putative ribosome biogenesis GTPase rsgA 1 n=23 Tax=Bacillales RepID=RSGA1_LISMF Length = 291 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 103/307 (33%), Positives = 156/307 (50%), Gaps = 24/307 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 EG +I V S G V++C R R S + GD V ++ G Sbjct: 3 EGQIIKALSGFYYVFSE-GKVYQCRARGNFRKRNISPLVGDDVEFQIENKTD------GY 55 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQIEP 155 + V R + L RP ANID ++V A+ P+ S N+ DR+LVA E I+P Sbjct: 56 ILDVMSRENALVRP--------PVANIDIAILVFSAVEPDFSTNLADRFLVAIEKEDIKP 107 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +I ++K+DL + + DIY IGY V + + + + +++ ++G+ ++ AGQ Sbjct: 108 VICISKMDLASESEKEQIAVYKDIYEAIGYDVFVTN--DEPDKEAIKDYISGKTAVIAGQ 165 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKS+LLN+L + T +IS+ G G+HTT L G V D+PG Sbjct: 166 SGVGKSTLLNSL-NSDLTLKTAEISNALGRGKHTTRHVELMPI-GDGFVADTPGFSSIEW 223 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 L+PE + F E D CK+R C HD +P CA++ AVE +IAE R+++Y +IL+ Sbjct: 224 DDLQPETLQFCFPEMEDRRSGCKFRGCMHDNEPNCAVKTAVEANEIAEFRYKHYIQILQE 283 Query: 336 MAQVKTR 342 + K R Sbjct: 284 LKNRKPR 290 >UniRef50_A1KRU2 Putative ribosome biogenesis GTPase rsgA n=29 Tax=Neisseriaceae RepID=RSGA_NEIMF Length = 307 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 105/297 (35%), Positives = 152/297 (51%), Gaps = 13/297 (4%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 D + + +G V + DG + + R+ GDRV P + ++E Sbjct: 22 DTAQITASYGRRYIVRTPDGTTYEASTRKKRVDFACGDRVRISPVNA------EQVVIED 75 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 R S+L R D + K IAAN+ Q++IV+A +P S+ ++ R L+A E IE +IVL Sbjct: 76 FLPRQSLLYRQDAWK-TKLIAANVTQLLIVTAAVPSPSMRLLQRALLAAEAAGIEAVIVL 134 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 NK DL A E++ Y +GY V+ + L L L G +I GQSG+G Sbjct: 135 NKADL---PETALWREKLKFYETLGYPVIETRALENADL--LRPVLQGHSNILLGQSGMG 189 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KS+L NALLG Q T DIS G+HTTT ARLY +IDSPG++EFGL HL+ Sbjct: 190 KSTLTNALLGSQ-TARTGDISAALDSGKHTTTHARLYDLNGETQLIDSPGLQEFGLHHLQ 248 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + + F +F +G C++ +C H +PGCA + A E G + R I + + Sbjct: 249 AADLPRYFPDFRHLVGQCRFHNCTHRAEPGCAFKAAAETGAASPERLAFLQGITDEL 305 >UniRef50_D2MKL2 GTPase EngC n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKL2_9BACT Length = 324 Score = 322 bits (825), Expect = 1e-86, Method: Composition-based stats. Identities = 104/318 (32%), Positives = 165/318 (51%), Gaps = 27/318 (8%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIR--------------SLVTGDRVVWRPGK 85 ++G VI DV+ D + RC +R T++ + GD V++ Sbjct: 15 EQGRVIRARTGFYDVQHGD-IILRCTLRGTLKRRNRSETGRRLYADPVAVGDWVIF---- 69 Query: 86 PAAEGVNVKGIVEAVHERTSVLTRP---DFYDGVKPIAANIDQIV-IVSAILPELSLNII 141 + +G++E + R + +R D + I AN QIV +VS ++P L+ + Sbjct: 70 --TQLDMEEGVIEDILPRRTKFSRQYAGRHEDIEQVIVANAHQIVAVVSTLMPPLNFRTL 127 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 DR+L+ E +E ++ LNK+DL+D+ + +Y +GY V+ S + + L L Sbjct: 128 DRFLILAEAGDMEAVVCLNKMDLVDEAQRTELTATFAVYEKLGYGVIYTSINVPESLDAL 187 Query: 202 EEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 AL + S+ G SGVGKSSLLNAL ++ T ++ + G+HTTT + G Sbjct: 188 RNALKDKFSVIVGASGVGKSSLLNALQPS-LDLRTGEVGIRTQKGRHTTTLVERFPLDIG 246 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI 321 G+V D+PG+RE GLW ++ E + F E YLG CKY DC H +P CAI++AVE G+I Sbjct: 247 GEVADTPGIREVGLWGVDTENLEYYFPEMEPYLGTCKYNDCAHVAEPDCAIQDAVEAGEI 306 Query: 322 AETRFENYHRIL-ESMAQ 338 R+ +Y + E +A+ Sbjct: 307 HTERYRSYVVLRTEEVAE 324 >UniRef50_B2JF36 Putative ribosome biogenesis GTPase rsgA n=56 Tax=Betaproteobacteria RepID=RSGA_BURP8 Length = 317 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 113/316 (35%), Positives = 175/316 (55%), Gaps = 14/316 (4%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGD-VHRCNIRRTIRSLVTGDRVVWRPGKP 86 + ++ + G+VI+ G H V DG + +C R + GD+V++ P Sbjct: 10 RAATANDRAQDRVRGLVIAAHGRHYIVAPEDGSAILQCFPRGKRSEIAVGDQVLYEPTSA 69 Query: 87 AAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 +G++ + ER ++L R D Y K AAN+DQ++IV A P S +++ R LV Sbjct: 70 D------QGVIVEIGERRNLLYRSDQYKS-KLFAANLDQLLIVLATEPHFSEDLLGRALV 122 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHT--QDGLKPLEEA 204 A E +++P+IVLNKID+ + + +++ +YR +GY VL VS LE Sbjct: 123 AAEENELKPLIVLNKIDV--EAALPLARKRLQLYRGLGYTVLEVSIKGQPDAARATLEAH 180 Query: 205 LTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG-GD 263 L G ++ GQSG+GKS+L+N L+ E+ T +IS G+HTTT RLY P G Sbjct: 181 LNGHSTLLLGQSGMGKSTLVNLLIP-DAEVATREISTALNSGRHTTTFTRLYPLPGSEGA 239 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 +IDSPG +EFGL HL ++ + F EF L C++ +C H +PGCAI EAV +G+IA+ Sbjct: 240 LIDSPGFQEFGLHHLTEGKLERAFPEFRPLLAECRFYNCHHLHEPGCAILEAVADGRIAK 299 Query: 324 TRFENYHRILESMAQV 339 R Y +++ +Q+ Sbjct: 300 ERHALYAQLVHEASQI 315 >UniRef50_B4RG68 Ribosome-associated GTPase n=2 Tax=Caulobacteraceae RepID=B4RG68_PHEZH Length = 360 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 19/313 (6%) Query: 41 EGIVISRFGMHADVESADGDV------HRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVK 94 G VI + + + G+ R + V GD V + P K Sbjct: 25 AGRVIVQQRGGYRLITEAGETDAKAAGRLMKSREEMARPVAGDWVAYEPRKAPE-----P 79 Query: 95 GIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 V+ V R + R GV + +AAN+D +V+++ +L+L ++RYL Sbjct: 80 AFVQHVLPRRTAFVRKAAGRGVHAQVVAANVDVAFLVTSLNSDLNLRRLERYLATAHESG 139 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISI 211 P+IVL K DL D + VL V++ +GL+ + L GR ++ Sbjct: 140 ARPVIVLTKADLAPDAAERVAEVRTIAGEA---PVLAVAAKQGEGLEAVAAHLEPGRTAV 196 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 G SG GKS+LLNAL G ++ + T +I ++ G+HTTT L P GG ++D+PG+R Sbjct: 197 LLGMSGAGKSTLLNALAGSER-MATGEIREDDERGRHTTTHRELVLLPSGGLILDTPGMR 255 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 E GLW + ++ F + +G C++ DC H +PGCA+R A+ +G + R+ ++ + Sbjct: 256 ELGLWDADA-GVSAVFEDIEALVGECRFSDCGHGGEPGCAVRAALADGSLDPDRWASFRK 314 Query: 332 ILESMAQVKTRKN 344 + A + R++ Sbjct: 315 LQAEAAYEQRRED 327 >UniRef50_B3QL20 Putative ribosome biogenesis GTPase rsgA n=11 Tax=Chlorobiaceae RepID=RSGA_CHLP8 Length = 311 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 115/315 (36%), Positives = 176/315 (55%), Gaps = 20/315 (6%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNI-------RRTIRSLVTGDRVVWRPGKPAAEG 90 E G+V G VE+ DG RC + GDRV +RP A+E Sbjct: 3 ETLSGVVTRVTGATYIVETGDGPKVRCRTVPSTVSENEGSNLVAVGDRVEFRPK--ASET 60 Query: 91 VNVKGIVEAVHERTSVLTRPD------FYDGVKPIAANIDQIVIVSAIL-PELSLNIIDR 143 +G++ V ER SVL R + + IAANIDQIV++++ P + ++DR Sbjct: 61 EMAEGVIVRVEERRSVLERRREVRRNRSKEKEQVIAANIDQIVLITSFDDPPFNSRLVDR 120 Query: 144 YLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEE 203 YLV E+ + +IV+NKIDL + V E +++YRN+ + +VS+ G++ L E Sbjct: 121 YLVFAESEHLPLLIVVNKIDL---DEEGMVEEDLEVYRNLDCNICLVSAEDGRGIEELRE 177 Query: 204 ALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 L R+S F+G SGVGKS+L+N L+G + E+ T + S +G G HTTT++ ++ P GG Sbjct: 178 LLRDRLSAFSGHSGVGKSTLINLLVGRE-ELRTAETSGKTGKGVHTTTSSAMFQLPGGGY 236 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 VID+PG+REF L + E + + EF ++ C + C H +PGCA+ AVE G+I Sbjct: 237 VIDTPGIREFNLAGITRENLRFYYTEFLRFMPECAFSSCSHTVEPGCAVIAAVESGRIDA 296 Query: 324 TRFENYHRILESMAQ 338 R+E+Y +L+S+ + Sbjct: 297 ERYESYLALLDSLDE 311 >UniRef50_D2RNU7 Ribosome small subunit-dependent GTPase A n=2 Tax=Acidaminococcus RepID=D2RNU7_ACIFE Length = 295 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 97/310 (31%), Positives = 148/310 (47%), Gaps = 25/310 (8%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 G +I + + V DG ++ C ++ ++ + GDRV E Sbjct: 2 STATGRIIKTYNGYYYVAGDDGVLYTCKVKGRMKQKRFIMAAGDRVEL-------EAQGA 54 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 +G++ V R ++L RP + AN+D ++ V A P+ S ++D+ L E Sbjct: 55 EGMIRQVLPRQNLLQRP--------LVANLDCLMAVFACGDPDPSFLLVDKLLALAEAAG 106 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 I +VLNK DL ++ IY +GY VL V + GL+P+ E + G F Sbjct: 107 IPAALVLNKRDLAP---AGLIDRFRSIYEPLGYPVLPVEAREGLGLEPILERVKGHTVAF 163 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SG GKS+LLN L + T +S G G+HTT A L F GG ++D+PG Sbjct: 164 GGPSGAGKSTLLNHL-DPSLTLKTGHVSSKIGRGRHTTRFAELLPF-AGGYIVDTPGFGN 221 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 L L+ +Q GF E GLC++ C H +P C ++ AVE G+IA +R+ +Y I Sbjct: 222 IDLSELQMDQAADGFREIRKQEGLCRFTGCTHTHEPDCEVKAAVERGEIAPSRYASYCTI 281 Query: 333 LESMAQVKTR 342 + +A K R Sbjct: 282 RQELADPKKR 291 >UniRef50_C6X5X0 Ribosome small subunit-stimulated GTPase EngC n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5X0_FLAB3 Length = 309 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 41 EGIVISRFGMHADVESAD-GDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGV 91 +G++ G V D G IR + L GD V + + Sbjct: 2 KGLITKSTGSWYQVLEQDTGKFFEARIRGKFKLIKTRLTNPLAVGDHVEFSLEQDDVAW- 60 Query: 92 NVKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQI-VIVSAILPELSLNIIDRYLVAC 148 + + + + L R + IA+NID I + PE SL +DR+L C Sbjct: 61 -----ITHIEPKKNYLIRKSVNLSKEAHIIASNIDVACFIFTLKFPETSLGFLDRFLACC 115 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E I+P+I+ NK+D+L ++ V IY+NIGY+ L +SS++Q L+ L+ L + Sbjct: 116 EAYNIQPLILFNKMDVLSEDEKELVQHIEAIYQNIGYQTLEISSYSQLNLEALQAILKDK 175 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 +S+F G SG GKS+L+NAL + T++IS + G+HTTT A+++ + GG VID+P Sbjct: 176 VSVFFGHSGSGKSTLVNALQP-DLNLKTSEISASQLKGKHTTTFAQMHFWHFGGSVIDTP 234 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE-GKIAETRFE 327 GVREF + ++ E+I F E CK+ +C H +P CA+ ++ G + ETR++ Sbjct: 235 GVREFAMIDVQKEEIQHYFPEIFALGRNCKFHNCMHINEPKCAVTADLDSGGDLEETRYQ 294 Query: 328 NYHRILESMAQ 338 Y +++E + Sbjct: 295 TYLKLMEEAEE 305 >UniRef50_D1R990 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R990_9CHLA Length = 383 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 122/363 (33%), Positives = 192/363 (52%), Gaps = 32/363 (8%) Query: 3 KNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFG--EPDEGIVISRFGMHADVESADGD 60 + KL+ Q+ R R K K+ + + F E D+G VIS V S D + Sbjct: 31 ERKLAS-QKDRSKYKKTDREKHEKQLAEQRNAKFSRDELDKGRVISIVPQGILVASGDQE 89 Query: 61 VHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPD- 111 C +R ++ + GD V++ P +G++ V R ++L+R D Sbjct: 90 FL-CTLRGVLKKERGLAKNLVTVGDFVLFEKTTP------EEGLIAHVEPRKTILSRADN 142 Query: 112 -FYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD--- 166 + IAANIDQ++I ++ + P L ++IDRY++A + + PIIV+NKIDLL Sbjct: 143 LSRRKEQLIAANIDQVLITASVLSPPLKPSLIDRYIIATQKGGMTPIIVVNKIDLLSTSD 202 Query: 167 ------DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220 ++ A ++ YR G +V+ VS+ T +G++ L+E + + S+F+GQSGVGK Sbjct: 203 AEDPILEQEKALFETFLEGYRQAGLKVIPVSTVTGEGIEALKEQMRDKSSVFSGQSGVGK 262 Query: 221 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP 280 SSL+NAL+G + I + G HTTT L GG ID+PG++ FG+W L+ Sbjct: 263 SSLINALIGSD--LRIGKIVHRTKKGAHTTTTTHLMPLDFGGWCIDTPGIKSFGVWDLDQ 320 Query: 281 EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 ++ F E + CK+ +C H + CA+ +AVEEGKI+ RFE+YH +L S+ Q Sbjct: 321 NELESYFSEIYRVGRTCKFPNCSHLHEEDCAVIQAVEEGKISLLRFESYHDLLHSITQKH 380 Query: 341 TRK 343 R+ Sbjct: 381 LRR 383 >UniRef50_B9K7Z8 Putative ribosome biogenesis GTPase rsgA n=7 Tax=Thermotogaceae RepID=RSGA_THENN Length = 295 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 109/301 (36%), Positives = 171/301 (56%), Gaps = 24/301 (7%) Query: 42 GIVISRFGMHADVESAD-GDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 GIV+S VE + G+ C +R R + GDRV + P + G+ Sbjct: 7 GIVLSFHSNMVTVEDEETGERLLCKLRGKFRLQNLKIYVGDRVEYTPDGTGS------GV 60 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEP 155 +E V R ++L VKP AN+DQ ++V + PE S IID++LV E ++E Sbjct: 61 IENVLHRKNLL--------VKPHVANVDQAILVVTVKMPETSTYIIDKFLVLTEKNELET 112 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++V+NK+D+ D+E + V E IY + Y ++ S+ T G++ L++ L G+IS AG Sbjct: 113 VLVINKMDIYDEEDLEKVKELERIYSKL-YPIVKTSAKTGMGIEELKKYLKGKISTMAGL 171 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSLLNA+ ++ +++S G+HTTT+A+L F GG V+D+PG + Sbjct: 172 SGVGKSSLLNAI-NPGLKLRVSEVSQKLQRGRHTTTSAQLLRFDFGGYVVDTPGFANLEI 230 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 +EPE++ F EF++ C + DC H +P C ++EAVE G+IAE+R+ENY ++ Sbjct: 231 GDIEPEELKYYFKEFNE--KQCFFSDCNHIDEPECGVKEAVENGEIAESRYENYVKMFHE 288 Query: 336 M 336 + Sbjct: 289 L 289 >UniRef50_B2RLV5 Putative ribosome biogenesis GTPase rsgA n=28 Tax=Bacteroidales RepID=RSGA_PORG3 Length = 315 Score = 318 bits (816), Expect = 1e-85, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 155/319 (48%), Gaps = 19/319 (5%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVN 92 +G+VI G V DG C + +R + GDRV P + Sbjct: 2 DGVVIKNTGSQYLVRCTDGTELYCMAKGNLRLKGIRSTNPVAVGDRVEIVPASQDGQP-- 59 Query: 93 VKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACE 149 ++ +H R + + R + + AN+D V+V I P + IDR+L E Sbjct: 60 --AYIKRIHPRRNYIIRRASNLSKESHILGANLDAAVLVCTINDPVTTTVFIDRFLATAE 117 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 ++ I+ NKID E ++ +Y IGY VS+ T +GL L+ L G++ Sbjct: 118 AYRVPVILAFNKIDCYTQEDRLQLDRLSAVYTAIGYPCCHVSAITGEGLPDLKSLLDGKL 177 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH---GGDVID 266 ++ AG SGVGKSSL+NAL+ ++ T IS G HTTT +++ FP G +ID Sbjct: 178 TLLAGHSGVGKSSLINALIP-HADLRTGAISQAHHTGMHTTTFSQMIDFPDLSPGSALID 236 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG++ FG + +++ F E C++ +C H +PGCA+ EA+ G+IAE+R+ Sbjct: 237 TPGIKGFGTLEMGEYEVSHYFPEIFAASKGCRFGNCTHTHEPGCAVLEALRRGEIAESRY 296 Query: 327 ENYHRILESMAQVKTRKNF 345 +Y ILE + R + Sbjct: 297 ISYLSILEDENAERYRPEY 315 >UniRef50_D1BMC8 Ribosome small subunit-dependent GTPase A n=3 Tax=Veillonella RepID=D1BMC8_VEIPT Length = 287 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 28/307 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 GIV+ + V+ G +H C +R ++ SL+ GDRV G Sbjct: 3 TGIVVKNMNGYFYVQDDTGTIHECKVRGRLKKGRYSLLVGDRVTISED----------GF 52 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIV-IVSAILPELSLNIIDRYLVACETLQIEP 155 VE++H R + + RP ANIDQ+V +V+A P+++ ++++ LV E I Sbjct: 53 VESIHGRHNSMVRPA--------VANIDQVVLVVAAHEPDINELLLNKMLVMIEHADIPI 104 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++ +NK DL+D E V D+Y++IGY+VLM S++ G+ L L +++ FAG Sbjct: 105 VLCINKCDLMDSETETMV----DLYKSIGYKVLMTSTYNMTGIDDLRHVLQHKVTAFAGP 160 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSLLNA + + T ++SD G+HTT A LY ++D+PG Sbjct: 161 SGVGKSSLLNA-VDPKFAFQTGEVSDKIKRGKHTTRHASLYSLDADSFIMDTPGFSAIEF 219 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 + E++ F EF +Y+ CK+ C H+ +P C I+ A+E G I + R++ Y I Sbjct: 220 NDVSLERLPTLFPEFGEYVDTCKFSPCYHEHEPICGIKAALEAGHIHQGRYDAYMSIRND 279 Query: 336 MAQVKTR 342 + + R Sbjct: 280 IESQRKR 286 >UniRef50_D1T763 Ribosome small subunit-dependent GTPase A n=2 Tax=Burkholderia RepID=D1T763_9BURK Length = 329 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 115/336 (34%), Positives = 172/336 (51%), Gaps = 26/336 (7%) Query: 20 RRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDV-HRCNIRRTIRSLVTGDR 78 K + G G+V++ G H V DG +C R + GDR Sbjct: 2 SGRAPKKAARGAGSGMHGTRTGGLVVAAHGRHYLVAPEDGGAPLQCFPRGKRSEVAVGDR 61 Query: 79 VVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSL 138 V++ P +G++ + ER ++L R D Y K AAN+DQ++IV A P S Sbjct: 62 VIYEPTSAD------QGVIVEIGERRNLLYRSDQYKS-KLFAANLDQLLIVLATEPHFSE 114 Query: 139 NIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSH--TQD 196 +++ R LVA E +++P+IVLNKID+ + ++++ YR +GY VL VS + Sbjct: 115 DLLGRALVAAEANELKPLIVLNKIDVT--AALDGARKRLEPYRALGYPVLEVSIRMQPEA 172 Query: 197 GLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 L E L G ++ GQSG+GKS+L+N L+ E+ T +IS G+HTTT RLY Sbjct: 173 ARATLTEHLHGHATLLLGQSGMGKSTLVNLLIP-DAEVATREISTALNSGRHTTTFTRLY 231 Query: 257 HFPH-------------GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 PH G +IDSPG +EFGL HL ++ + F EF L C++ +C Sbjct: 232 PLPHSSDTAGVNAVNGAAGALIDSPGFQEFGLHHLTEGRLERAFPEFRPLLPNCRFYNCH 291 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 H +PGCAI EAV +G+I R Y +++ +Q+ Sbjct: 292 HLHEPGCAILEAVADGRIRRERHALYAQLVHEASQI 327 >UniRef50_D2R982 Ribosome small subunit-dependent GTPase A n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R982_9PLAN Length = 375 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 176/337 (52%), Gaps = 20/337 (5%) Query: 7 SKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNI 66 KG R D ++ E G V+S G+ + V+ G++ RC Sbjct: 46 GKGDLTRKRTVVGDHAGRESAGFDVTPDVSSEMIAGRVLSVHGLLSHVQIPSGEIIRCAT 105 Query: 67 RRTIRS--------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKP 118 RR +++ + GD V +RP + +G++E + R + L+R Sbjct: 106 RRVLKNLSTDQRHVVAAGDIVYYRPNGTS------EGLIERIEPRANTLSRTSK-GRQHV 158 Query: 119 IAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQM 177 I AN+DQ++IV SA P L N+IDR +V E I P++ +NK+DL++ + Sbjct: 159 IVANVDQVLIVASAAEPSLKPNLIDRMIVEAERTGIRPVVCINKVDLVEPSDL---QPIA 215 Query: 178 DIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 +Y +GY VL++S+ G+ L + + G+ ++ AGQSGVGKSS+LNA+ + Sbjct: 216 GVYGQLGYDVLLLSAKENWGISRLRKLVAGKQTVVAGQSGVGKSSILNAIENG-LALRVG 274 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 +S+ + G+HTTT A+L GG V+D+PG+R F LW + P ++ + + Y+ LC Sbjct: 275 RVSEENQKGRHTTTTAKLIPLAAGGYVVDTPGIRSFELWDIIPAEVIGYYRDLRPYVCLC 334 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 +Y DC H + CA+++AV +G++ R+E+Y + E Sbjct: 335 RYPDCTHLHETDCAVKDAVADGRLDVRRYESYCYLFE 371 >UniRef50_C6WWG3 Ribosome small subunit-dependent GTPase A n=4 Tax=Betaproteobacteria RepID=C6WWG3_METML Length = 325 Score = 316 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 104/300 (34%), Positives = 164/300 (54%), Gaps = 14/300 (4%) Query: 41 EGIVISRFGMHADVESADGD-VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 +G V++ +G VE D C R L GD V+ + +G+VE+ Sbjct: 36 QGTVVAAYGKRYQVELTDTKQRISCVTRGKKTDLACGDFVLVKLTDK------EEGVVES 89 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 R ++L R + + K +AAN+ QI+IV A P +++R L+A E I+ +IVL Sbjct: 90 TLPRKTLLFRSNAFKS-KMLAANVTQIIIVLATQPSFYEALLNRCLIAAEAAGIKALIVL 148 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 NK DL D+ ++++Y +GY+VL +S+ + L L +SI GQSG+G Sbjct: 149 NKCDLTDNHD---ALRKLELYSKLGYQVLPLSAKLD--ISSLRPYLQDEVSILVGQSGMG 203 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KS+++NALL + + T ++S G+HTTTAA LYH +IDSPG++EFGL HL Sbjct: 204 KSTIINALLPSEA-VRTQEVSHVLDSGKHTTTAAHLYHLDASSQLIDSPGLQEFGLHHLN 262 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 +++ F+EF +LG C++ +CKH +P CAI EA+ + KI+ R Y + ++ Sbjct: 263 TDELEHAFIEFRPFLGKCRFNNCKHLQEPDCAITEALSQDKISAERLAIYKMLRTEISHQ 322 >UniRef50_C7IKW3 Ribosome small subunit-dependent GTPase A n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IKW3_9CLOT Length = 349 Score = 316 bits (810), Expect = 9e-85, Method: Composition-based stats. Identities = 83/323 (25%), Positives = 154/323 (47%), Gaps = 16/323 (4%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR---SLVTGDRVVWRPG 84 + +++ +I+ +G V + G+V L GD + Sbjct: 13 ESEWNKMQAQNMYPARIIADYGQMLRVVTHKGEVFVNRPLHKDNNYLHLAVGDWIGLEET 72 Query: 85 KPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLNIID 142 + A +V V R + +R + +AAN+D + ++ ++ + ++ ++ Sbjct: 73 ETAEFP-----LVRFVLSRKTKFSRAAAGIEAKEQIVAANVDTVFLIQSLNRDFNMKRLE 127 Query: 143 RYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLE 202 RYL+A P++VL K D DD + G V+ +SS T +GL+ ++ Sbjct: 128 RYLIAAWDSGALPVVVLTKADCCDDIPQKLA---VATASAPGVEVISISSKTGEGLEEIK 184 Query: 203 E-ALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 + L G+ G SGVGKS+LLN L + + T++I ++ G+HTTT L P G Sbjct: 185 KFLLPGKTIALLGSSGVGKSTLLNTLADKEL-LKTHEIREDDSRGRHTTTHRELVLLPGG 243 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI 321 G ++D+PG+R +W + + F + G C++ DCKH +PGCA+R A+ G++ Sbjct: 244 GILMDTPGMRALSIWESDT-GMEIMFGDVEKLTGQCRFYDCKHQNEPGCAVRFALNSGEL 302 Query: 322 AETRFENYHRILESMAQVKTRKN 344 R+E++ ++ + MA ++ +K Sbjct: 303 DIARWESWLKLQKEMAHLEAKKE 325 >UniRef50_C4ZNY5 Ribosome small subunit-dependent GTPase A n=3 Tax=Betaproteobacteria RepID=C4ZNY5_THASP Length = 314 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 120/321 (37%), Positives = 182/321 (56%), Gaps = 19/321 (5%) Query: 27 EKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKP 86 K + + +G+V++ FG H +V++A G + +C R S GD V PG Sbjct: 2 RKRTHAGAIAEARIDGVVVAAFGRHYEVDTARGRL-QCYPRGKKSSYACGDEVELVPGG- 59 Query: 87 AAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 + +G++E +H R ++L R D + K IA+N+ +VIV A P S ++ R + Sbjct: 60 -----DGQGVIETLHPRRNLLWRSDAF-REKLIASNLSHLVIVVATEPGFSDLLVSRCIA 113 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 A E+ I P+IVLNK DL + Q++ +R +GY V+ VS+ G L L Sbjct: 114 AAESQGIVPLIVLNKADLA--ARLEAARHQLEPFRKLGYEVVEVSAL--QGADALRARLA 169 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP------H 260 G +IF GQSG+GKS+L NA++ + + T +ISD G+HTTT ARLYH P Sbjct: 170 GLQAIFVGQSGMGKSTLTNAIVP-EAQAATREISDALDSGKHTTTFARLYHLPVTADEAR 228 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 GG +IDSPG++ FGL HL E + + FVE +LG C++RDC+HD++PGCA+ A+E G Sbjct: 229 GGWLIDSPGLQVFGLAHLAAEDLAETFVELRPHLGRCRFRDCRHDSEPGCALLGALEAGA 288 Query: 321 IAETRFENYHRILESMAQVKT 341 I R+E++ I +A+ + Sbjct: 289 IHPRRWEHFRAIRSEIAEARR 309 >UniRef50_A9WK24 Ribosome small subunit-dependent GTPase A n=6 Tax=Chloroflexi (class) RepID=A9WK24_CHLAA Length = 324 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 111/312 (35%), Positives = 158/312 (50%), Gaps = 25/312 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS-------LVTGDRVVWRPGKPAAEGVNVK 94 G V+ V++ G V C +R ++ +V GD+V P N + Sbjct: 24 GTVLRAQSGFFWVQTEQG-VLECRLRGRLKKERQATDLVVIGDQVEVMPVG------NGQ 76 Query: 95 GIVEAVHERTSVLTR----PDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACE 149 G +EAV R S L R P I AN+DQ+++V + PE + ++DRYLV CE Sbjct: 77 GAIEAVLPRRSRLARRAAGPRGAYKEDVIVANVDQVLLVFSCTKPEFTPRMLDRYLVICE 136 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 ++ +IV KIDL+ Y IGY V S + +G+ L L GRI Sbjct: 137 HSELPVVIVATKIDLV---VQHAAEAMFSPYARIGYPVFYTSIVSGEGIAELRSQLAGRI 193 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF--PHGGDVIDS 267 S+ G+SGVGKSSLLNA+ + T +IS+ G+HTTT A L P GG V D+ Sbjct: 194 SVVTGKSGVGKSSLLNAIQPG-LNLRTGEISERLTKGRHTTTVAELIPLDLPGGGYVADT 252 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+RE GLW++ + F EF +L C + C H +P CA+R AVE G I R++ Sbjct: 253 PGIREIGLWNVPERDLAWCFREFRPFLDDCYFAGCTHLHEPHCAVRAAVERGDITAARYD 312 Query: 328 NYHRILESMAQV 339 +Y R++ES + Sbjct: 313 SYARLMESEDEE 324 >UniRef50_Q8YK41 Putative ribosome biogenesis GTPase rsgA 2 n=3 Tax=Cyanobacteria RepID=RSGA2_ANASP Length = 353 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 145/316 (45%), Gaps = 26/316 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNV 93 G V + V S G++ + +R GD V+ + Sbjct: 27 GRVAIEYRNTYIVYSKQGEL-AAKVTGKLRHQATQPQDFPAVGDWVIIQ-----TRESEG 80 Query: 94 KGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 + + R S +R + +AAN+D + +V + + + I+RYL+ Sbjct: 81 CATIHGILPRKSKFSRKTVGSKTEEQIVAANVDTVFLVCGLDGDFNPRRIERYLILAWES 140 Query: 152 QIEPIIVLNKIDLLD--DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GR 208 P+IVLNK DL + DE ++ V IG +L++S+ G+ L+ L G+ Sbjct: 141 GANPVIVLNKADLCNSLDECISEVEAV-----AIGVPILVLSATNNQGIDTLKAYLQPGQ 195 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 G SGVGKS++ N L G + + G+HTTT L P GG ++D+P Sbjct: 196 TVALLGSSGVGKSTITNQLKGASVQ-AVQPVRQGDDRGRHTTTNRELILLPTGGLIVDTP 254 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G+RE +W + E + + F + C++R+C+H +PGCA+++A+ EG++ +RF Sbjct: 255 GMREIQIWAGD-ESLQETFADIETLAPECRFRNCQHHNEPGCAVQQALLEGELDYSRFLG 313 Query: 329 YHRILESMAQVKTRKN 344 Y ++ + + + ++ Sbjct: 314 YQKLQKELNYLVRKQE 329 >UniRef50_Q88WF3 Putative ribosome biogenesis GTPase rsgA 2 n=3 Tax=Lactobacillus plantarum RepID=RSGA2_LACPL Length = 352 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 140/308 (45%), Gaps = 24/308 (7%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNV 93 G +I + V + G+ + + GD V + Sbjct: 27 GRIIGQHRDWYQVITTAGE-RSAQVTGKLAYEAASPAAFPAVGDWVCLSSS------ADN 79 Query: 94 KGIVEAVHERTSVLTRPDFYDGV-KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 + +EA+ R SVL R + IA NI+ I I ++ + ++ ++RYL Sbjct: 80 QAQIEAIAPRQSVLARGAVNRQDGQIIATNINTIFICMSLNADFNVRRLERYLTIAWDSG 139 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISI 211 P+IVL K DL D + D+ ++G + S T GL L+ LT G+ Sbjct: 140 ALPVIVLTKADLCTD-LATKLRAVADV--SVGVPTITCSVETGQGLDELQPYLTTGQTVA 196 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 F G SGVGKS+L+N LLG + T I + G+HTTT+ +L P G VID+PG+R Sbjct: 197 FVGSSGVGKSTLINRLLGQDI-LATKSIRTDDNKGRHTTTSRQLIPLPTGACVIDTPGMR 255 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 E ++ + Q F E CK+ DC H ++PGCA+R AVE G + R ++Y + Sbjct: 256 ELQIF---MGDLNQTFAEIAALATQCKFNDCTHTSEPGCAVRAAVEVGTVTSERLQSYQK 312 Query: 332 ILESMAQV 339 + M+ Sbjct: 313 LQREMSYQ 320 >UniRef50_Q2YB53 Putative ribosome biogenesis GTPase rsgA n=6 Tax=Betaproteobacteria RepID=RSGA_NITMU Length = 313 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 113/308 (36%), Positives = 174/308 (56%), Gaps = 12/308 (3%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVN 92 ++ P G +++ FG H V++AD C +R GD V + + Sbjct: 7 PSVTSPPLRGEIVAAFGRHFLVKTADESTLTCVLRGKKSGAACGDWVEI------YQTAS 60 Query: 93 VKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 +G++E + R+++L R D K IAAN Q++IV A +P S +I+R LVA E+ Q Sbjct: 61 EQGVIERILPRSALLYRSDL-SREKLIAANATQVIIVVAPVPSFSEELINRCLVAAESQQ 119 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 + +IVLNK DLL +A + +YR + Y +L +S+ +KPL L +S+ Sbjct: 120 LSVLIVLNKTDLLGPSKVAL--NGLSLYRELDYTLLPISARND--VKPLLPYLEDNLSVL 175 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 GQSG+GKS+++NAL+ E T DIS G+HTTT ARLYH +IDSPG+++ Sbjct: 176 VGQSGMGKSTIINALVP-DAERATGDISPTLDAGRHTTTHARLYHLDRNARIIDSPGIQQ 234 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 FGL HL E I GF EF Y+G CK+ +C+H +PGCA+ A+ E +++ R + YH++ Sbjct: 235 FGLQHLSIEAIAWGFREFRPYIGKCKFNNCRHSGEPGCALANAMRESEVSVRRIDLYHKL 294 Query: 333 LESMAQVK 340 + S+ + Sbjct: 295 IASLNTNR 302 >UniRef50_C9LUJ5 Ribosome small subunit-dependent GTPase A n=2 Tax=Selenomonas RepID=C9LUJ5_9FIRM Length = 300 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 103/307 (33%), Positives = 168/307 (54%), Gaps = 24/307 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 +G V+ V + +G + +R ++ +V GD V + A G+ Sbjct: 9 QGKVLRAQNSFFYVATREG-LVEAKLRGRLKKERIAVVPGDDVELELTEGGA------GV 61 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE- 154 +E ER S+L RP + ANIDQ+V+V A P+++ +IDR+LV E +IE Sbjct: 62 IERRCERKSLLRRP--------LVANIDQVVLVFAAREPDINPVLIDRFLVLAEWSKIER 113 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 ++ +NK+DLL+ + A + +YR IGY V ++S+ T +G+ ++ + + S+FAG Sbjct: 114 IVLCINKMDLLEGDE-AEIPALAALYREIGYPVCLLSTVTGEGVADMQSLVEEKTSVFAG 172 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGKSSLLN L + T +S+ G+HTT A+L F GG ++D+PG Sbjct: 173 SSGVGKSSLLNCLAPGIA-LSTGAVSEKIKRGRHTTRTAQLLPF-AGGFLVDTPGFSATE 230 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L +EP + F EF + G C+++ C H +PGCA++EAV+ G+I ++R+ +Y +L+ Sbjct: 231 LAEIEPCALPGLFPEFRSFFGACRFQPCTHSHEPGCAVKEAVQAGRIEDSRYASYLEMLQ 290 Query: 335 SMAQVKT 341 Q K Sbjct: 291 QSVQRKK 297 >UniRef50_A7HNP9 Ribosome small subunit-dependent GTPase A n=5 Tax=Thermotogaceae RepID=A7HNP9_FERNB Length = 302 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 176/306 (57%), Gaps = 27/306 (8%) Query: 42 GIVISRFGMHADVESAD-GDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 GIV+ + VE + G+ C +R + +TGD V + + V +G+ Sbjct: 14 GIVVKFYSNLLVVEDIETGEQFLCKLRGKFKKQGIRPITGDIVEY------TKIVGNEGV 67 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEP 155 VE + R S L +P ANIDQ++IV+ I P + L+I+DR++V E + Sbjct: 68 VENILNRKSELKKPS--------VANIDQVIIVTTIDKPAVPLDILDRFIVLVEYEGLPI 119 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +IVLNK+DLL +E + E IY+ + Y V+ S+ T G++ L++ L+G+IS+FAG Sbjct: 120 VIVLNKVDLLKEEQ---IKEFESIYKKL-YPVVKTSAMTGYGIEELKQQLSGKISVFAGM 175 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSLLN++ ++ T +IS+ G G+HTTTAA L GG V+D+PG + Sbjct: 176 SGVGKSSLLNSIEN-NLKLRTGEISEKLGRGKHTTTAAELLRLSFGGWVVDTPGFASLDI 234 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 H+ + + F+EF + C + DC H +PGC ++E V++GKI +R+E+Y R+LE Sbjct: 235 DHISENILRELFIEFEN--DKCYFPDCYHIDEPGCHVKEMVKKGKIPYSRYESYQRMLEE 292 Query: 336 MAQVKT 341 + +++ Sbjct: 293 LQELRK 298 >UniRef50_D1YX46 Probable GTPase EngC n=2 Tax=Euryarchaeota RepID=D1YX46_METPS Length = 358 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 98/315 (31%), Positives = 160/315 (50%), Gaps = 17/315 (5%) Query: 36 FGEPDEGIVISRFGMHADVESADGDV---HRCNIRRTIRSLVTGDRVVWRPGKPAAEGVN 92 G + G V + V + G++ +R+ GD V Sbjct: 22 AGSHEPGRVSTVTRTGCKVYTKAGEINARIPGKLRKDSLLPAVGDWVALSKDDSGT---- 77 Query: 93 VKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACET 150 V+A+ R S ++R D G + IA N+D IV+++ +L+L ++RYL Sbjct: 78 --YTVQAILPRRSKISRKDAGRVTGEQVIATNVDTAFIVTSLNKDLNLRRLERYLAVARQ 135 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRI 209 +EPIIVLNK D+ D +N+ I G + +S+ + GL+ L + G+ Sbjct: 136 NAVEPIIVLNKSDVCPDID-GSLNDVKSI--APGVPIFAISAIQKTGLEQLSPYMKEGKT 192 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 + G SGVGKS+++NAL G ++ DI ++ G+HTTTA L GG +ID+PG Sbjct: 193 IVLLGSSGVGKSTIINALEGYGRQ-KIGDIREDDSRGRHTTTARELIIMESGGVIIDNPG 251 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +RE LW + I + F + + CK+ DC+H+T+PGCAI+ A++EG + E RFE+Y Sbjct: 252 MRELQLWDAT-DGIAETFQDIEELSRQCKFSDCQHETEPGCAIKRAIKEGTLPEARFESY 310 Query: 330 HRILESMAQVKTRKN 344 ++ + +K +K+ Sbjct: 311 QKLQRELLALKRKKD 325 >UniRef50_B1KX53 Putative ribosome biogenesis GTPase rsgA n=32 Tax=Clostridium RepID=RSGA_CLOBM Length = 292 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 83/309 (26%), Positives = 162/309 (52%), Gaps = 25/309 (8%) Query: 41 EGIVISRFGMHADVE-SADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKG 95 +G +I G ++ ++ C R R + GD V K N KG Sbjct: 2 KGTIIKGIGGFYYIKIDNSEEIIECKARGKFRHTELTPMIGDYVEISVDK------NNKG 55 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 +E ++ER S L RP AN+ Q ++V + P++++++++++L+ CE ++ Sbjct: 56 AIEKIYERRSELFRPA--------VANVTQALVVFSFKNPDINIDLLNKFLLLCEYNNLK 107 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 I+ NK+DL++ E + + + GY ++ +++ + + +++ + +++F G Sbjct: 108 AIVCFNKMDLVNKED---YKDIISMIEQAGYDIIFLNAKEERNMDIIKKLIKDNVTVFCG 164 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGKS++LN ++G + ++T +IS+ G+HTT + L + G ++D+PG Sbjct: 165 PSGVGKSTMLNKIIGKE-TMITGNISEKLKRGKHTTRHSELIYVDEG-LLVDTPGFSSLD 222 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 + +E E + EF D++G CK+ C H +P CA+++AVEEG I + R++ Y + LE Sbjct: 223 INFMEKEDLLHCIPEFRDFIGECKFTGCLHHREPNCAVKKAVEEGHIHKNRYDFYIKTLE 282 Query: 335 SMAQVKTRK 343 + +K Sbjct: 283 EFMNRRKKK 291 >UniRef50_Q71ZZ0 Putative ribosome biogenesis GTPase rsgA 2 n=21 Tax=Listeria RepID=RSGA2_LISMF Length = 346 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 22/308 (7%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTI------RSLVTGDRVVWRPGKPAAEGVNVKG 95 G V + F + V + + + R GD V V+ Sbjct: 24 GRVTAVFRDYYRVITENEEFLASLKRGNFYELSSTSLPAVGDFVE----------VSSDA 73 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 + +V ER +V +R + + IAAN D +IV ++ + +LN ++RYL P Sbjct: 74 QILSVLERKTVFSRMNKDSEEQLIAANFDYALIVMSLNHDFNLNRLERYLTVAWDSGATP 133 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAG 214 II+L K DL++D + Y G V + + G + LE L + G Sbjct: 134 IIILTKADLVEDLTAFAQQLETVAY---GVPAYYVDNLSHHGFEALERDLKPNSTLVLLG 190 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGKSS +N+L G + T I ++ G+HTTT ++ +G VID+PG+REFG Sbjct: 191 SSGVGKSSFINSLAGTDL-MKTAGIREDDSKGKHTTTHREMHLLTNGWIVIDTPGMREFG 249 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 + + F + + C++ DC H +PGCA++ A+E+G + +EN+ ++ Sbjct: 250 V-GFNQAGLETTFSDVEELAEGCRFHDCSHTQEPGCAVKAALEDGTLTMQHYENWLKLQR 308 Query: 335 SMAQVKTR 342 MA + Sbjct: 309 EMAYHARK 316 >UniRef50_C6D8C7 Ribosome small subunit-dependent GTPase A n=2 Tax=Bacillales RepID=C6D8C7_PAESJ Length = 370 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 150/330 (45%), Gaps = 22/330 (6%) Query: 26 KEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRT------IRS--LVTGD 77 K + + VI++ + + DG+ H + ++S GD Sbjct: 23 NNKMEQMPASARQLVPARVIAQHSHSYQIMTPDGE-HTATVTGKYEFNAALKSDFPAVGD 81 Query: 78 RVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPE 135 V+ + ++ + R S + R V + + AN+D + I +A+ + Sbjct: 82 WVMAEKLPGET-----RSVIHILLPRQSAMIRKAAGSTVDDQVVGANMDYLFITNALNQD 136 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 195 ++ ++RYL+A P+I+L K DL DD + G V ++S+ Sbjct: 137 FNVRKMERYLIAAWESGASPVILLTKADLCDDPEFFAAQMESA---APGVPVHLISALQN 193 Query: 196 DGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAAR 254 G + L L G+ G SGVGKS+LLN L + T I + G+HTTT Sbjct: 194 QGKEQLLPYLQPGKTIAVTGSSGVGKSTLLNWLADENI-METQGIRETDARGRHTTTHRE 252 Query: 255 LYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIRE 314 L+ P G V+D+PG+RE LW + + Q F + C+YRDC+H++DPGCA+ + Sbjct: 253 LFLLPSGALVMDTPGMRELQLWDA-HDGLEQAFSDIEALAAGCRYRDCRHESDPGCAVLQ 311 Query: 315 AVEEGKIAETRFENYHRILESMAQVKTRKN 344 A+E+G + R NY + + ++ + ++N Sbjct: 312 AIEDGTLEAKRLHNYRKTAKELSHLARKEN 341 >UniRef50_B0K1Y6 Ribosome small subunit-dependent GTPase A n=14 Tax=Clostridia RepID=B0K1Y6_THEPX Length = 293 Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats. Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 25/308 (8%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 EG ++ V + G + C R R + GD V + + +G Sbjct: 5 EGRIVRGIAGFYYVATEHG-IVECRARGKFRKDNVTPLVGDIVEIQM------INDSEGY 57 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 + + R + L RP AN+DQ +IV AI PE++ ++D+ +V E+ IEP Sbjct: 58 ILNILPRKNELIRP--------PIANVDQAIIVFAIAKPEINRVLLDKMIVLAESNDIEP 109 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 II +NK+DL +D + + IY+ IGY+ + S T+DG+K L+ L ++S FAG Sbjct: 110 IICINKVDLKEDRE---AFDLVTIYQKIGYKAVTTSVVTKDGIKELKSYLKDKVSFFAGP 166 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSL+N++ ++ T ++S+ G+HTT + L GG V+D+PG L Sbjct: 167 SGVGKSSLINSI-QSNIKLKTGEVSEKLLRGRHTTRSVELLSLDFGGYVLDTPGFTALTL 225 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 ++ + + F EF + CK+ C H +P C I +AV+EG I + R+ +Y +L+ Sbjct: 226 -DIDNQDLRYYFREFLELQRGCKFSSCLHVNEPDCNIIKAVKEGLIDKNRYLSYLSLLKE 284 Query: 336 MAQVKTRK 343 + + + R+ Sbjct: 285 LKEKEKRR 292 >UniRef50_B1YJQ5 Ribosome small subunit-dependent GTPase A n=67 Tax=Bacillales RepID=B1YJQ5_EXIS2 Length = 349 Score = 311 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 23/318 (7%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAE 89 G V + F V + DG+ + +R GD V + G+ A Sbjct: 15 NEQLGRVTAVFQKQYRVMTTDGETLS-ELSGKLRFEALTKAELPAVGDWV-IQSGREA-- 70 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 KG +E V R++ +R + I AN+D ++V A + ++ ++RYL Sbjct: 71 ---GKGRIERVLPRSTQFSRKAAGTETEEQVICANVDIALLVMAFGHDFNVRRLERYLTV 127 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT- 206 P+IVL K L F++E + G V S T +GL L EAL Sbjct: 128 AWEAGATPVIVLTKKSLTASAD-EFLSEVEAV--AFGTPYFAVDSLTGEGLDDLREALRP 184 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 + G SGVGKS+L+NAL Q + T + ++ G+HTTT L G ++D Sbjct: 185 NETIVLVGSSGVGKSTLVNALAEEQL-METGGVREDDERGRHTTTHRELKRLSSGLLLVD 243 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG+RE GLW + +T F + + C++RDC+H +PGCA++ A+ EG ++ R+ Sbjct: 244 TPGMRELGLWDGT-DGLTSTFSDIEELAESCRFRDCQHGEEPGCAVQAALTEGTLSHERW 302 Query: 327 ENYHRILESMAQVKTRKN 344 ++ ++ +A + ++N Sbjct: 303 GSFLKLKHEVAYAERKQN 320 >UniRef50_B0SZL3 Ribosome small subunit-dependent GTPase A n=1 Tax=Caulobacter sp. K31 RepID=B0SZL3_CAUSK Length = 355 Score = 311 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 91/313 (29%), Positives = 153/313 (48%), Gaps = 21/313 (6%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTI-------RSLVTGDRVVWRPGKPAAEGVNVK 94 G VI + V + +G++ R + GD V V Sbjct: 26 GRVIVQHRDGYQVITDEGEL-RAKPSGRLLHEAREAGHPAVGDWVALSLNL-----VERT 79 Query: 95 GIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 + A+ R + R D ++ IAANID +V+++ +L+ I+RYL A Sbjct: 80 ATIHAILPRRTAFVRRAADSVQTLQVIAANIDVAFVVTSMNADLNPRRIERYLAAAWQSG 139 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISI 211 P++VL K DL +D +E + +G VL+VS+ GL L +T G + Sbjct: 140 ARPVVVLTKSDLCEDPQTQ-ADEIAAL--AVGCPVLVVSARQGVGLDALLAQVTPGETCV 196 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 G SGVGKS+L+NA LG + + T I ++ G+HTT+ +L P GG ++D+PG+R Sbjct: 197 LIGSSGVGKSTLVNAFLGEDR-MATKAIRESDDQGRHTTSHRQLVLLPGGGLILDTPGIR 255 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 E GL + E ++ F + C++ DC H ++PGCA+R A+E G + R+ ++ + Sbjct: 256 EVGLIDAD-EGLSVVFDDIERLAESCRFSDCGHASEPGCAVRGALESGVLDPARWAHFQK 314 Query: 332 ILESMAQVKTRKN 344 + +A V+ +++ Sbjct: 315 LGAELALVEEKQD 327 >UniRef50_A3I6Q8 Ribosome-associated GTPase n=1 Tax=Bacillus sp. B14905 RepID=A3I6Q8_9BACI Length = 356 Score = 311 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 85/322 (26%), Positives = 157/322 (48%), Gaps = 23/322 (7%) Query: 30 DYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAE 89 ++ + EG ++ H S + + GD V+ Sbjct: 36 EHKHSYRVLAQEGEWLATIAGHYAYTSLAREDY----------PAVGDWVLVEKMPG--- 82 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGVK--PIAANIDQIVIVSAILPELSLNIIDRYLVA 147 + I+ + +R SV +R ++ +A+N+D +++V ++ + ++ ++RYLVA Sbjct: 83 --EERAIIHQLFQRKSVFSRKVAGLEIQEQIVASNVDIVLLVMSLNADFNIRRLERYLVA 140 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-T 206 +PIIVL K DL DD + V E + G V + S+ + +GL ++ Sbjct: 141 AWDSGAKPIIVLTKADLCDDAS-SLVKEVDSV--AFGVDVFVTSAISGEGLTEIQALFTE 197 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 G G SG GKS+L NAL G + + +DI ++ G+HTTT L P GG +ID Sbjct: 198 GVTGALLGSSGAGKSTLTNALCG-EMLMKVSDIREDDAKGRHTTTHRELVMLPSGGCLID 256 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG+RE LW+ + + ++ F + + C+YRDC H +P CA+++A+ +G++ + R Sbjct: 257 TPGMRELQLWN-QGDSLSSSFQDVEELAKACRYRDCTHQKEPYCAVQQAIADGELDQNRL 315 Query: 327 ENYHRILESMAQVKTRKNFSDT 348 ++Y ++ +A ++ + N Sbjct: 316 QSYFKLQRELAYMERKTNVQAK 337 >UniRef50_B1ZUH7 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Opitutus terrae PB90-1 RepID=RSGA_OPITP Length = 367 Score = 310 bits (795), Expect = 4e-83, Method: Composition-based stats. Identities = 87/276 (31%), Positives = 134/276 (48%), Gaps = 10/276 (3%) Query: 73 LVTGDRVVWRPGKPA---AEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIV 127 GD V R + GV + G + AV R + TR D + +A N+D + Sbjct: 65 PAVGDWVAVRLRPESLASGAGVALVGDIHAVLPRRTAFTRRAVGDADAEQVLATNVDTVF 124 Query: 128 IVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRV 187 +V+ + + +L I+RYL + +P++VLNK DL D A + V Sbjct: 125 LVTGLDRDFNLRRIERYLAVARASEAQPVVVLNKSDLHPDARGAEAEVRRITRTA---PV 181 Query: 188 LMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLG 246 + +S+ DG+ L L G G SG GKS+L+N LLG Q++ T +S G Sbjct: 182 VTLSAARGDGIAALAPWLVPGATVALLGSSGAGKSTLINRLLGKQRQ-DTGPLSHAMNKG 240 Query: 247 QHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDT 306 +HTTT L P G VID+PG+RE LW ++ + + F E C++ DC H Sbjct: 241 RHTTTHRELLALPGGALVIDTPGLRELQLWGVDESAVAETFPEVAALAAECRFPDCTHQR 300 Query: 307 DPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 +PGCA+R A+++G + TR+ +Y ++ A R Sbjct: 301 EPGCAVRAALDDGTLDPTRWASYEKLQREQAYAARR 336 >UniRef50_C5CF78 Ribosome small subunit-dependent GTPase A n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF78_KOSOT Length = 300 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 113/308 (36%), Positives = 178/308 (57%), Gaps = 25/308 (8%) Query: 42 GIVISRFGMHADVE-SADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVN 92 GIVI+ V DG+ C +R + +V GD V ++P + Sbjct: 3 GIVINVQKGLYKVRPVNDGEDINCTLRGRLFKQSQTTKSMVVVGDYVEFQPV------LG 56 Query: 93 VKGIVEAVHERTSVLTRPDFYDG----VKPIAANIDQIVIVSAI-LPELSLNIIDRYLVA 147 +G++ A+ ER S L R + +AAN+DQ ++V A+ P+ N+I+RY+V+ Sbjct: 57 GRGVITAIEERKSKLVRKGAGKKGSHLEQVVAANVDQAILVFAVKNPKYRKNLIERYIVS 116 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 + IEP+I NKIDL++ ++ V E + R +GY VL+ S+ T +G+K L+ L Sbjct: 117 AKYGGIEPVICFNKIDLIN---LSEVQEDIKECRKLGYTVLLTSTITGEGIKKLKSLLKD 173 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 +IS+FAG SGVGKSSL+NA+ +K+ TN++S + G+HTTT++++Y P GG +ID Sbjct: 174 KISVFAGSSGVGKSSLVNAIFN-EKKTKTNEVSTSHYKGKHTTTSSQVYELPFGGRIIDV 232 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+REFG+ I F + + CK+RDC H +PGCA++EA+E G + E R+ Sbjct: 233 PGMREFGVID-NGTGIRDAFPDIIELAKHCKFRDCNHINEPGCAVKEAIESGLLEERRYR 291 Query: 328 NYHRILES 335 NY ++ +S Sbjct: 292 NYLKLKKS 299 >UniRef50_C3J9M6 Ribosome small subunit-dependent GTPase A n=3 Tax=Bacteria RepID=C3J9M6_9PORP Length = 317 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 153/308 (49%), Gaps = 19/308 (6%) Query: 41 EGIVISRFGMHADVE-SADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGV 91 G+V+ G V DG ++ +R +V GDRV +P + E + Sbjct: 2 TGLVLRCVGNLCRVLLDGDGGECDALVKGNLRLKGLRSTNPVVVGDRVELQPTR---EDL 58 Query: 92 NVKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVAC 148 + A+ R + + R + +AANID +++V+ I PE S +DR+L Sbjct: 59 EHPYYITAICPRRNYIIRKASNLSKESHILAANIDVALLVVTMIQPETSFTFVDRFLATA 118 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E I +++ NKIDL +E + E IY +GY L +S+ GL+ + + GR Sbjct: 119 EAYDIPVVLLFNKIDLYGEEENRRLAEWQLIYAPLGYPTLSISATEGIGLEEVWPHIAGR 178 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP---HGGDVI 265 I + +G SGVGKSSL+NALL + T+ IS G G HTTT + + GG +I Sbjct: 179 IVLLSGHSGVGKSSLINALLPGS-SLRTHSISLAHGTGMHTTTYSAMIPLAAERGGGYLI 237 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 DSPG++ FG + F EF C++ +C H +PGCA+ A+E G+IA +R Sbjct: 238 DSPGIKGFGTLEMNEHNAHHYFREFFALSEGCRFNNCTHINEPGCAVLAALERGEIAPSR 297 Query: 326 FENYHRIL 333 + +Y IL Sbjct: 298 YVSYLGIL 305 >UniRef50_B3QS55 Ribosome small subunit-dependent GTPase A n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS55_CHLT3 Length = 334 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 114/324 (35%), Positives = 175/324 (54%), Gaps = 24/324 (7%) Query: 35 LFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS-------LVTGDRVVWRPGKPA 87 + + GI+ GMH V+++DG+ + C R+ S V GD V + Sbjct: 12 VKSDELSGIIFEGKGMHYLVQASDGEFYNCRTLRSTVSENPDATLAVVGDSVTLKSTLAP 71 Query: 88 AEGVNVKGIVEAVHERTSVLTRPD------FYDGVKPIAANIDQIVIVSAIL-PELSLNI 140 E +G++ V ER L R + +A+NI+QIVIVS++ P + L + Sbjct: 72 DEENYGEGVITKVFERRMKLARKRNRKTNRSGEAEHVMASNIEQIVIVSSVAMPPIRLGL 131 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKP 200 IDRYL E+ + +IV+NK+DL E +A ++IYR +GY+ L+VSS T G+ Sbjct: 132 IDRYLAFAESEGLNALIVVNKMDLEHSEELAG---DVEIYRLLGYKSLLVSSVTGMGMDE 188 Query: 201 LEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 L L +IS+F G SGVGKS+L+NAL G +++ D+S S G HTT+ A + P Sbjct: 189 LRRELGQKISVFTGHSGVGKSALINALTG--EDLRIGDVSQKSLKGAHTTSNAVMLSIPG 246 Query: 261 G-----GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREA 315 G VID+PG+REF L ++P + F+EF ++ C + C H +P CA+R+A Sbjct: 247 KTRDDVGYVIDTPGIREFALAGIDPLDLRHFFIEFQNFAPDCGFSSCTHTLEPNCAVRDA 306 Query: 316 VEEGKIAETRFENYHRILESMAQV 339 + GKI TR+E+Y I ++ + Sbjct: 307 YQNGKIFPTRYESYLTIYATLEEY 330 >UniRef50_C5CSN3 Putative ribosome biogenesis GTPase rsgA n=29 Tax=Burkholderiales RepID=RSGA_VARPS Length = 318 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 19/308 (6%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAV 100 +G+VI+ G H VE+ G+ C+ R V GDRV W+ + +G +E V Sbjct: 21 DGLVIASHGRHCLVETPTGERLICHPRGKKSQAVVGDRVRWQASED-------EGTIEEV 73 Query: 101 HERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN 160 R ++ R D K AAN+D ++I+ A PE S + + R L+A E +I PII LN Sbjct: 74 VPRRNLFYRQDEI-RTKSFAANLDHVLILIAAEPEFSEHQLARALIAAEAERITPIIALN 132 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS--SHTQDGLKPLEEALTGRISIFAGQSGV 218 K DL + A+ ++ YR + + VL +S + + L + L G+ ++ G SG Sbjct: 133 KSDLAEPFERAW--NKLAPYRRMHHGVLPLSLKASGEADYASLMKLLAGKSTLVLGPSGA 190 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG--GDVIDSPGVREFGLW 276 GKS+L+N L+ LT +IS G+HTTT+ Y +IDSPG +EFGL Sbjct: 191 GKSTLINLLVPG-ATALTGEISQALNSGKHTTTSTTWYWVDEARTTSLIDSPGFQEFGLN 249 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE----GKIAETRFENYHRI 332 H+ P Q+ + ++ CK+ +C H +PGC + V+ G I+ TR+ Y + Sbjct: 250 HIAPMQLAGLMPDIAEHANDCKFYNCTHLHEPGCGVIANVDAPGKPGPISATRYRIYGEL 309 Query: 333 LESMAQVK 340 ++Q + Sbjct: 310 FAELSQSR 317 >UniRef50_Q03FX9 Putative ribosome biogenesis GTPase rsgA n=25 Tax=Lactobacillales RepID=RSGA_PEDPA Length = 309 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 156/318 (49%), Gaps = 25/318 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 G +I DV + D + R R R S + GD V ++ E N G Sbjct: 3 TGQIIQLLAGFYDVLTEDHKIVRTRARGNFRNQKTSPLVGDMVDFK------ESENDTGY 56 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 + +H R + L RP ANIDQ VIV+A P S N++DR LVA IE Sbjct: 57 ITKIHTRENELVRPPL--------ANIDQAVIVTAATEPSFSANLLDRQLVALAEKHIEA 108 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLM-VSSHTQDGLKPLEEALTGRISIFAG 214 I+ +K DLL + + Y+ IGY+V+ +SS L L+E+ +++IF G Sbjct: 109 ILYFSKTDLLSPTEFQDLQKIAGYYQKIGYQVIFPISSQPDADLIELKESFKNQLTIFMG 168 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 Q+G GKS+LLN + + I T ++S G+HTT L G V D+PG + Sbjct: 169 QTGAGKSTLLNRI-DSKLNIATGEVSQALNRGKHTTRKVSLIPIEDG-LVADTPGFSTYA 226 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 ++ + Q+ + F++F C++R+C H +PGCA++ AVE+G + +R+ NY + +E Sbjct: 227 VFEMADTQLKEYFIDFKKLSQNCRFRECLHLNEPGCAVKAAVEDGSVLSSRYANYEQFIE 286 Query: 335 SMAQVK---TRKNFSDTD 349 + K RK + D Sbjct: 287 LIRNQKPEYKRKGYQKKD 304 >UniRef50_B8CWT4 Ribosome small subunit-dependent GTPase A n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWT4_HALOH Length = 282 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 24/302 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSLV-TGDRVVWRPGKPAAEGVNVKGIVEA 99 +G+V G V ++ R IR ++ V GD V ++E Sbjct: 2 KGLVTKAVGGFFFVADEQQNIIRTRIRGKVKRKVYPGDFVKVN-----------DAMIEK 50 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIV 158 ++ RT++L RP AN+DQ++++ +I P + ++D++L+ E + ++P+I+ Sbjct: 51 LYPRTNLLFRPA--------VANVDQVLVIHSIQNPPFARKMLDKFLIMVEAIGVKPVII 102 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 +NKIDL + + ++M Y+ GY+V ++S + GL L L ++S+ AG SGV Sbjct: 103 INKIDLKVPD--IELEKEMKDYKEEGYQVYLISVKEKMGLNELYLTLEEKLSVLAGPSGV 160 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKSSL+ AL+ + + ++S G HTT L GG + D+PG L + Sbjct: 161 GKSSLIKALVP-EARVKIGEVSQKLKRGVHTTRHVELLPINKGGWIADTPGFSALDLRGI 219 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 E + F Y G CK+R C H +PGC +++AV+EG I+E R+ +Y I + + Sbjct: 220 LSENLRFYFPGLARYEGQCKFRGCTHTHEPGCQVKKAVKEGMISEKRYNSYLNIYRDLEE 279 Query: 339 VK 340 + Sbjct: 280 RE 281 >UniRef50_C6PE63 Ribosome small subunit-dependent GTPase A n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PE63_CLOTS Length = 291 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 26/307 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIV 97 G +I G V + G + C R R + GD V G + Sbjct: 5 GRIIRGIGGFYYVYTEHG-IIECRARGKFRISNIVPIVGDNVDIDTENLKD------GFI 57 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEPI 156 +H R + L RP +N+DQ +I + + P L+ +D+ ++ E I P+ Sbjct: 58 INIHNRKNELVRP--------PVSNVDQAIITFSIVNPALNRLQLDKMIILVELNGIHPV 109 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I +NKIDL+ ++ A ++Y+N+GY V+ S G+ L+ + G+ S F G S Sbjct: 110 ICINKIDLVTEDVFA---PLYNLYKNLGYDVIATSKFDNIGIDKLKAMIIGKTSFFTGPS 166 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKSSL+N + G K+ D+S+ G+HTT L F +G V+D+PG L Sbjct: 167 GVGKSSLINCIQGTNKQ-EIGDLSEKLLRGKHTTRNVELIPFENG-YVLDTPGFTSLNL- 223 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 ++ ++ F +F +Y C+++ C H +P C ++ AV G I + R+ NY + + Sbjct: 224 DIDETELKYYFRDFRNYELDCRFKSCLHINEPDCGVKIAVSNGLIDKIRYSNYLNLYNEL 283 Query: 337 AQVKTRK 343 K R+ Sbjct: 284 KSNKRRR 290 >UniRef50_Q6MEY3 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEY3_PARUW Length = 354 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 109/363 (30%), Positives = 184/363 (50%), Gaps = 32/363 (8%) Query: 3 KNKLS--KGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 + KL+ K + + + ++ LK ++ + E EG V+S V G+ Sbjct: 2 QRKLAVAKDRSKYKKTDQEKYLKNLEKGHQQKISKQ-EWLEGRVVSIIPQGILV-DYQGE 59 Query: 61 VHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPD- 111 C ++ ++ + GD V++ +GI+ +V R ++L+R D Sbjct: 60 RISCVLKGLLKRDKTQAKNLVAVGDFVLFEKTHE------GEGIIASVKPRRTILSRADN 113 Query: 112 -FYDGVKPIAANIDQIVI-VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD--- 166 + IA NIDQ++I VS + P L ++IDRY++A ++P+IV+NK+DL D Sbjct: 114 LSRRKEQLIAVNIDQVIITVSVVNPPLKPSLIDRYIIAAHKGNMDPLIVINKVDLFDADD 173 Query: 167 ------DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220 ++ E + Y V+ VS+ +GL L +A+ G+ S+F+GQSGVGK Sbjct: 174 EDQILREQEKDLYQELLKAYAVAKVPVISVSAAKNEGLDLLRQAMLGKSSVFSGQSGVGK 233 Query: 221 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP 280 SSL+NA+ GL + + + + G HTTT +L GG ID+PG++ FG+W L+ Sbjct: 234 SSLINAMTGLD--LRVGETVERTKKGSHTTTTTQLIPLEFGGWCIDTPGIKSFGIWDLDK 291 Query: 281 EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 ++ F E H CK+ DC H + CA+R+AVEE I+ R+ +Y ++E+ + Sbjct: 292 SEVEGYFPEIHACGLNCKFPDCTHSHEEQCAVRQAVEEEHISFVRYMSYQVLMETSNEKH 351 Query: 341 TRK 343 R+ Sbjct: 352 IRR 354 >UniRef50_A3ZVZ2 Putative uncharacterized protein n=2 Tax=Planctomycetaceae RepID=A3ZVZ2_9PLAN Length = 257 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 95/261 (36%), Positives = 153/261 (58%), Gaps = 12/261 (4%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SA 131 + GDRV +RP N +GI+E++ R +L R I AN+DQ++IV SA Sbjct: 2 VAAGDRVWFRPAD------NHEGIIESIEPRYGILCR-ASKRRQHVIVANVDQLLIVASA 54 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS 191 P L N+IDRYLV E I P+I +NK+DL+D A + + +Y +GY+V+++S Sbjct: 55 AEPYLKPNLIDRYLVTAEKAGITPVICINKVDLIDP---ADLQPLVGVYGQMGYQVILLS 111 Query: 192 SHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTT 251 + G++ L A+ R S+ +GQSGVGKS++LNA+ + +S+ + G+HTTT Sbjct: 112 ATEGIGVERLRAAVRDRASVLSGQSGVGKSTILNAIEPG-LNLRVGHVSETTDKGRHTTT 170 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 + L GG V+D+PG+R+F LW + PE++ F + ++ C++ DC H + GC Sbjct: 171 TSSLVPLAAGGHVVDTPGIRQFQLWDVIPEEVAGYFRDLRPFITGCRFPDCSHTHEEGCG 230 Query: 312 IREAVEEGKIAETRFENYHRI 332 ++ AV +G + R+E+Y +I Sbjct: 231 VKGAVADGFLDVRRYESYCQI 251 >UniRef50_D2QSL3 Ribosome small subunit-dependent GTPase A n=2 Tax=Flexibacteraceae RepID=D2QSL3_9SPHI Length = 308 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 103/307 (33%), Positives = 165/307 (53%), Gaps = 16/307 (5%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRR--------TIRSLVTGDRVVWRPGKPAAEG 90 G+VI G ++ + DG + + ++ + GDRVV+ + Sbjct: 1 MQNGLVIRSTGSWYEIRNPDGHIFQGRLKGKFKLKGLKVTNPIAVGDRVVF----DVEDE 56 Query: 91 VNVKGIVEAVHERTSVLTRPDFYDGVK--PIAANIDQIVIVSAIL-PELSLNIIDRYLVA 147 I+ + R + + R + +AANIDQ V+++ + P S IDR+LV+ Sbjct: 57 AENTAIITDISPRDNYIIRQSVHKTAHGHILAANIDQAVLLATLAMPRTSAGFIDRFLVS 116 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 E+ +I IV NKID+L++EG+AF E +D+Y IGY L S+ G++ E L Sbjct: 117 AESFRIPTTIVFNKIDILNEEGLAFQQEIIDLYERIGYNCLSTSATEGVGVEAFRELLDQ 176 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 ++++ AG SGVGKSSL+NA+ + TN++S + G HTTT A ++ +ID+ Sbjct: 177 KVTLVAGHSGVGKSSLVNAIAPG-LNLRTNEVSSFANKGVHTTTFAEMFELSPNTFIIDT 235 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG++E GL +I F E D L C++ +C H +PGCAI+EAV E +IAE+R+ Sbjct: 236 PGIKELGLMDTSKTEIGHYFPEMRDRLNQCRFNNCLHINEPGCAIKEAVAEEEIAESRYM 295 Query: 328 NYHRILE 334 +Y ++E Sbjct: 296 SYLSMIE 302 >UniRef50_Q0AXM1 GTPase EngC n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXM1_SYNWW Length = 294 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 20/309 (6%) Query: 35 LFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLV-TGDRVVWRPGKPAAEGVNV 93 + EG+V+ R+ V+ ++ C +R I++ V TGDRV + P + Sbjct: 1 MTANKAEGLVLKRYSGFYYVQDEQYQIYECKLRGKIKAPVFTGDRVKFTPLEA------G 54 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 KGI+E++ R + L RP AN++ ++I+ A P SL ++D+ L+ + Sbjct: 55 KGILESIIPRKNELYRPRI--------ANVNLLLIIMACKQPSPSLILLDKLLLLASYYR 106 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 I P I+LNK DL D F+ D Y +G + S+ + G+ L + +I++F Sbjct: 107 ITPQILLNKSDLPPDSKSIFIE---DYYPQMGLPPIKTSAIKKTGIDTLRIVIENKITVF 163 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SG GKSSLLNAL+ + T ++S G+HTT LY GG + D+PG + Sbjct: 164 AGPSGAGKSSLLNALVDG-ISVKTQELSKKVERGKHTTRHVELYPLESGGWIADTPGFSQ 222 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + ++ ++ F + CK+ DC H + CA+++AV EG IA++R++NY I Sbjct: 223 LEIPAIKSSELASYFNDLSSVAEECKFNDCLHQGEKECAVKDAVNEGLIAKSRYQNYISI 282 Query: 333 LESMAQVKT 341 LE + + Sbjct: 283 LEEILAKER 291 >UniRef50_C4L300 Ribosome small subunit-dependent GTPase A n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L300_EXISA Length = 321 Score = 307 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 91/311 (29%), Positives = 151/311 (48%), Gaps = 12/311 (3%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGV--NVKG 95 + + G V ++F H S +V+ C + R T +R G V + +G Sbjct: 4 QTETGRVTAQF-QHLYTVSVGDNVYTCGVSGKFRHAATSERDYPVIGDYVTIQVREHGQG 62 Query: 96 IVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 + + ER +VL+R + + I AN+D ++I A + ++ ++RY +A Sbjct: 63 TIHHLLERRTVLSRAAAGNETREQLICANVDYVLITMACGHDFNIRRLERYTLAAWDTGA 122 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR-ISIF 212 PIIVL K D +D + Q++ G +V VS+ T +G+ L AL F Sbjct: 123 IPIIVLTKTDQVDSVDTLLEDIQVN---APGIQVFPVSAVTGEGVAELRHALPSESTIAF 179 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SGVGKS+L NAL + +T + G+HTTT L+ VID+PG+RE Sbjct: 180 VGSSGVGKSTLTNALA-HETLAVTQAVRAQDERGKHTTTHRELFRIDD-LYVIDTPGMRE 237 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 FGLW E + + F + C++RDC H +PGCA++EA+ G + R+ +Y ++ Sbjct: 238 FGLWE-GSEHLDETFRDIEALAETCRFRDCSHQKEPGCAVQEALSSGTLDAKRYASYVKL 296 Query: 333 LESMAQVKTRK 343 + ++ ++ Sbjct: 297 ERELLYMEKKQ 307 >UniRef50_Q65LI5 GTP-binding protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65LI5_BACLD Length = 350 Score = 307 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 26/322 (8%) Query: 40 DEGIVISR----FGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPA 87 +EG+V+ R V + +G I +R GD V RP Sbjct: 18 EEGLVLGRIALEHKRLYRVWTEEGQ-WLAEISGRLRFEVESRGDYPAVGDWVYMRP---- 72 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYL 145 G KGI+ V R S +R + + AAN++ I +V+A+ + ++ I+RYL Sbjct: 73 -RGGEKKGIITEVVPRFSKFSRKAAGEPAEEQITAANVNTIFLVNALGLDFNVRRIERYL 131 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 + P+IVL+K D+ D V + + G + ++S+H G+ L+ + Sbjct: 132 LLAWESGANPVIVLSKADIA-DRIEEKVRQAESV--AFGVPIHVISAHEGSGMDELKAYV 188 Query: 206 T-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 G G SGVGKS+++N L ++ + ++ G+HTTT ++ P GG + Sbjct: 189 KQGETVALLGSSGVGKSTIINFFLKEDRQ-AVQSVREDDDKGRHTTTHREMFMLPEGGLL 247 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID+PG+R LW E E Q F + C++ DC H T+PGC++REA+ +G++ Sbjct: 248 IDTPGMRALELWESE-EGFKQSFSDIDQLAQNCRFSDCLHQTEPGCSVREALADGRLDAG 306 Query: 325 RFENYHRILESMAQVKTRKNFS 346 RF++Y ++ + + ++ + + Sbjct: 307 RFQSYLKLKKELEYLERKTDKR 328 >UniRef50_C9RJ19 Ribosome small subunit-dependent GTPase A n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ19_FIBSS Length = 410 Score = 306 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 122/373 (32%), Positives = 188/373 (50%), Gaps = 47/373 (12%) Query: 3 KNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVH 62 + + + R +R+K E ++ + EG+V+ +V D + Sbjct: 43 ERPIKERFSREFKKAKIKRIKNPVENIGEENCV-----EGLVLEVHRRTCEVRLDDRTLA 97 Query: 63 RCNIRRTIRS-------------------------------LVTGDRVVWRPGKPAAEGV 91 + RR + GDRV+ A + Sbjct: 98 DASYRRETKENTPLSSLDSRLSSNTVTAMYRATTSKTLGEFPAVGDRVLLGLVNDADDEG 157 Query: 92 NVKG----IVEAVHERTSVLTRP---DFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDR 143 + G V V R S L RP D + + +AANIDQ+VIV+++ PE + +DR Sbjct: 158 DGVGSQKYCVVRVLPRKSELKRPGPRDSFYKQQTLAANIDQVVIVASVTQPEFNYGFMDR 217 Query: 144 YLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEE 203 +L+A + ++VL K+DLL + G A ++ + + I +V+ VS + DGL+ L Sbjct: 218 FLLAANLNDLPFVLVLTKMDLLPN-GEADLSSDIRDFMKIVDKVIPVSVKSGDGLEVLRN 276 Query: 204 ALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 L G+ S+F+G SGVGKS+L+N L+ E+ T D+ + G G+HTTT++ L+ FP GG Sbjct: 277 ELVGKSSVFSGMSGVGKSTLINELVP-HAELRTGDVRERDGKGRHTTTSSSLFDFPGGGY 335 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVE-FHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIA 322 VID+PG+R GL +EPE + + F F D L CK+ +CKH +PGCA+R AVE GKI+ Sbjct: 336 VIDTPGIRSIGLMDMEPETLAKIFPGFFEDDLFTCKFSNCKHLKEPGCAVRAAVESGKIS 395 Query: 323 ETRFENYHRILES 335 E R+ +Y RIL S Sbjct: 396 EARYASYVRILNS 408 >UniRef50_Q038H7 Predicted GTPase n=8 Tax=Lactobacillus RepID=Q038H7_LACC3 Length = 301 Score = 306 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 94/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%) Query: 36 FGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGV 91 E G +I + + D+ + +G +R R ++R + + GD ++PG+ E Sbjct: 1 MSEDLTGRIIKQISGYYDI-AVNGTTYRTRGRGSLRNDKITPLVGDIAAFQPGEGDDE-- 57 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACET 150 G + V R + L RP AN+DQ ++I SA+ P+ S N++DR+LV E Sbjct: 58 ---GYLLKVLPRHNALVRP--------PVANVDQAVLITSAVEPDFSKNLLDRFLVYLEG 106 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS-SHTQDGLKPLEEALTGRI 209 I I L K DL + + + + + Y IGY V L ++ + ++ Sbjct: 107 HDIHAEIYLTKTDLTKPQRLTKIRQDLAGYTKIGYPVFAPDKPFDPTILAQVQASFADKL 166 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 +IF GQ+G GKS+LLN L+ ++ T IS G+HTT LY HGG V D+PG Sbjct: 167 TIFTGQTGAGKSTLLNHLVPG-LDLATAAISHALNRGRHTTRTTDLYPI-HGGLVADTPG 224 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 GL + + + F EF CK+R C+H ++P CA++ A+ G I ++R++NY Sbjct: 225 FSSLGLLDVTLDDLRDRFPEFAALAPNCKFRGCQHVSEPHCAVKAALAAGDIMQSRYDNY 284 Query: 330 HRILESMAQVKT 341 + E ++ + Sbjct: 285 LQFREELSGKRP 296 >UniRef50_C1ZE03 Ribosome small subunit-dependent GTPase A n=2 Tax=Planctomyces RepID=C1ZE03_PLALI Length = 375 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 112/338 (33%), Positives = 174/338 (51%), Gaps = 27/338 (7%) Query: 12 RRVNANHQRRLKTSKEKPDYDDN---LFGEPDE---GIVISRFGM-HADVESADGDVHRC 64 RV ++ K + D N L +P++ G V+S G V+ DG C Sbjct: 44 ERVRGRNEMSRKRTISGATLDGNRIVLEIDPEKALYGRVLSSVGSTQCTVQVEDGRRFMC 103 Query: 65 NIRRTIRSL--------VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV 116 ++RR +R++ V GD+V G++E V R VL+R + Sbjct: 104 SVRRIVRTVARETRNAVVAGDKVWITASDE------TTGVIERVEPREGVLSR-GHQNRE 156 Query: 117 KPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNE 175 + AN+ Q++IV SA P L +IDR+LV+ + PI+ +NKIDL+D + + Sbjct: 157 HILVANVSQMLIVGSAAQPNLKPALIDRFLVSAGKGGVHPIVCVNKIDLVDPVELVSL-- 214 Query: 176 QMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEIL 235 + Y IG V+M S T G+ L + L ++FAGQSGVGKSSLLNA+ + Sbjct: 215 -LGWYSQIGCDVVMTSVTTGYGVDRLRQLLKNEQTVFAGQSGVGKSSLLNAVQPG-LSLQ 272 Query: 236 TNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG 295 T +S+ + G+HTT +L GG V+D+PG+R+ LW + PE+I FVEF ++ Sbjct: 273 TGQVSEVTQKGKHTTRYTQLLPLIEGGWVVDTPGIRQMELWDVRPEEIEGYFVEFRPFVA 332 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 LC++ C+H + CA+ AV+ I R+E+Y R++ Sbjct: 333 LCRFPSCRHYREEDCAVIRAVQMDLIPRVRYESYLRMM 370 >UniRef50_B0VIG3 Putative GTPase YjeQ n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIG3_9BACT Length = 359 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 20/334 (5%) Query: 14 VNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS- 72 + + + K + + +G ++ + + +G++ + ++ Sbjct: 35 IKEKAEFKASRISTKANQSYKEGLKLVQGRIMEIKSNYRYIVEINGELVTAKMSGRLKQF 94 Query: 73 -------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANI 123 GD V N +E + R S L R + +AANI Sbjct: 95 LYQSHTIAAVGDFVA------VDVANNSDKRIEKILPRRSALIRYGKGSFQKEIILAANI 148 Query: 124 DQIVIVSA-ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRN 182 DQ++I S+ P +IDRYL ++PIIV+NKIDLL+DE + EQ Y Sbjct: 149 DQVIITSSWRKPRFKAGLIDRYLCIVAIQNLKPIIVINKIDLLEDEQ--ELKEQTAYYEA 206 Query: 183 IGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 +GY ++ S G++ L+E L + S+F G SG GK+SL+N L + T ++SD Sbjct: 207 MGYPLICTSVVNGTGMQELKELLKNKDSVFTGHSGTGKTSLINYLEPS-LNLPTAEVSDR 265 Query: 243 SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDC 302 + G+HTT+ + L + GG ++D+PG++ L + E I + F F CK+ DC Sbjct: 266 NEKGKHTTSQSILIPWSFGGHLLDTPGIKTITLHREDKEHIPKVFPGFERLYSKCKFSDC 325 Query: 303 KHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 +H + GCA+ EA+EEG I R+++Y + S+ Sbjct: 326 RHINEDGCAVLEAMEEGIIPYERYDSYQYLYASL 359 >UniRef50_Q7UUZ6 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Rhodopirellula baltica RepID=RSGA_RHOBA Length = 313 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 166/306 (54%), Gaps = 16/306 (5%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSL--------VTGDRVVWRPG--KPAAEG 90 +G V+S G+ + V +G ++ C +R+ ++SL V GDRV +R + Sbjct: 10 QGRVLSVHGLQSKVLGDNGVLYACAVRQVLKSLSTSQRNVIVAGDRVWFRSESRDGVSLK 69 Query: 91 VNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACE 149 G++E V RT +++R + +NID ++I+++ P + +IDR ++ Sbjct: 70 SEADGMIERVEPRTGMISRTS-RGRQHVLVSNIDAMLIIASAEQPGIKPALIDRMILTAH 128 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 QIEPI+++NK+DL+D + + + +Y ++GYRVL S+ T + L L R Sbjct: 129 QCQIEPIVIINKVDLID---LVDLQPLIGVYSSLGYRVLPTSAETGQNVAYLRALLKDRQ 185 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 + AGQSGVGKSSLLNA+ + +S ++ G+HTTTA++L GG V D+PG Sbjct: 186 TALAGQSGVGKSSLLNAVQPG-LGLAIGAVSSDNDKGKHTTTASQLIPLADGGAVFDTPG 244 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +R+F LW + ++ + Y+ C+Y DC H + CA++ AV + +I R++ Y Sbjct: 245 IRQFQLWDISAGEVAGLMPDLRPYVSGCRYPDCLHLAEDDCAVKTAVADARIDARRYDAY 304 Query: 330 HRILES 335 +LE Sbjct: 305 CHLLEE 310 >UniRef50_Q8TKG2 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Methanomicrobia RepID=RSGA_METAC Length = 369 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 16/310 (5%) Query: 41 EGIVISRFGMHADVESADGDV---HRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIV 97 G + SR +V V ++R + V GD VV + +V Sbjct: 42 AGRISSRHKTVCEVLVPGAVVQAGISGALQRIGKQPVVGDFVVLL-----DQPETGSRMV 96 Query: 98 EAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 + R + L+R G + IAAN+D I IV+++ +L+L ++RYL + P Sbjct: 97 VNILPRRTCLSRGAAGDGGGEQLIAANLDTIFIVTSVGKDLNLRRLERYLAIVYSSGASP 156 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAG 214 +I+LNKIDL DD V + D+ + V+ +S+ ++ GL L L G G Sbjct: 157 VILLNKIDLADDPAR-LVEKIRDVTGD--VPVIPLSALSKTGLDALGPYLNPGETVALVG 213 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGKS+L+NA LG + T DI + G+HTTT +++ P+G +ID+PG+RE Sbjct: 214 SSGVGKSTLINAFLGETVQ-KTADIRKDDEKGRHTTTVRQMFLLPNGAVLIDNPGIREIQ 272 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L E + + F E D CK++DC H +PGCA+ +AV +G I E R E+YHR+ + Sbjct: 273 LGD-SAEGLEKAFSEIVDAARNCKFKDCTHRNEPGCAVLQAVRDGIIPEERLESYHRLTD 331 Query: 335 SMAQVKTRKN 344 ++ + Sbjct: 332 ELSFQSKKAE 341 >UniRef50_B8I262 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Clostridium RepID=RSGA_CLOCE Length = 305 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 158/318 (49%), Gaps = 26/318 (8%) Query: 39 PDEGIVISRFGMHADVESADGD-VHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 GI++ G V+ + + C R R + GDRV + +G Sbjct: 1 MQLGIILKGIGGFYYVKQEKTEDIFECKPRGVFRKNSVTPLPGDRVGF----SIIDGDKK 56 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQI-VIVSAILPELSLNIIDRYLVACETLQ 152 G ++ + R+S L RP AN+DQI +IV+A P ++D+ L+ ET Sbjct: 57 LGNIDEILPRSSELVRPA--------VANVDQIAIIVAAKAPNPDYMLLDKLLITAETRN 108 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 I +I +NKIDL DD + Y GY V+ +SS G K L+E L G I++F Sbjct: 109 IRVLICVNKIDLDDDT----AKIVRNAYSPAGYDVIEISSVRNIGYKRLKEELKGHITVF 164 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AGQSGVGKS++LN ++ + T +S+ G+HTT A L +GG V D+PG Sbjct: 165 AGQSGVGKSTILNHIM-ESWVMETGSVSNKIERGKHTTRHAELLELKYGGYVADTPGFSS 223 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 F + + Q+ + + EF Y+ C++ C H T+PGC + EA+E +I R++ Y ++ Sbjct: 224 FEIIDIPYNQLERYYPEFLPYINTCRFNSCSHITEPGCRVIEALERSEIDNNRYQRYIQL 283 Query: 333 LESMA---QVKTRKNFSD 347 +++ Q K +K S Sbjct: 284 YKALKDIPQYKGKKTESR 301 >UniRef50_Q67PQ4 Putative GTPase n=1 Tax=Symbiobacterium thermophilum RepID=Q67PQ4_SYMTH Length = 292 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 102/304 (33%), Positives = 144/304 (47%), Gaps = 18/304 (5%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGV--NVKGIVEA 99 G VI V DG C R R DR+ R G + + +G +E Sbjct: 4 GQVIRSHSNIYYVLV-DGREVECRPRGKFRL----DRLQVRAGDEVEVTLAPDGEGRIEK 58 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIV 158 V R + L RP AN+DQ ++V + PE +DR LV E +EP+I+ Sbjct: 59 VLPRRNCLERP--------PVANVDQCLVVFTLVEPEADYLFLDRVLVHVEQAGVEPLIL 110 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 LNKIDL+++ +A +GYRVL +S+ GL L L G+ S+ AG SGV Sbjct: 111 LNKIDLVEEADVAAFVRLYGDL--VGYRVLPISAAEGRGLDELRRHLAGKTSVLAGHSGV 168 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKS L+ AL + ++ D+S S G+HTT L GG + D+PG + Sbjct: 169 GKSRLVRALEPQRADVRIGDLSAKSRKGRHTTRHVELIPLTGGGLLADAPGFTYLEFQDI 228 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 + + F EF Y C+Y DC H +P CA+R+AVE G I E+R NY L+ + Sbjct: 229 DKWTLRDCFREFARYQAECRYADCLHRKEPDCAVRDAVEAGAIPESRHRNYLMFLDEVEA 288 Query: 339 VKTR 342 +K Sbjct: 289 MKRW 292 >UniRef50_C9LLK1 Ribosome small subunit-dependent GTPase A n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK1_9FIRM Length = 288 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 92/305 (30%), Positives = 161/305 (52%), Gaps = 23/305 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS---LVTGDRVVWRPGKPAAEGVNVKGIV 97 EG V+ + + + + RC R ++ ++ GD V + K +G++ Sbjct: 2 EGTVLKDQNGYFTILGNNQVLTRCRSRGALKKKTDVLVGDHVEYEANK------GFEGVI 55 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEPI 156 V++R + L RP +N+D++V+VS+ P+L+ ++D+ ++ E + P+ Sbjct: 56 TKVYKRKNQLYRP--------PVSNVDELVLVSSICTPDLNRGLLDKMILLAENANMPPV 107 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I +NK DL + Y GY + S++TQDGL L++ L GRI +F+G S Sbjct: 108 ICINKCDL----DEVSAKRVCEEYEKAGYPCVYTSTYTQDGLDDLKKLLRGRIIVFSGPS 163 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKSS+LN LG + +S +G G+ TT A L F G ++D+PG + Sbjct: 164 GVGKSSILNYFLGRSY-FTSGAVSAYTGKGRATTRHAELVPFKTGVFLMDTPGYTLLDID 222 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 L+ +++ F +F YLG C + +C+H ++P CAIR+A+E+G + + R+E+Y +I + + Sbjct: 223 LLDIDELGFLFKDFRPYLGKCYFNNCRHISEPKCAIRKAIEDGVVQKRRYESYLQIFQKL 282 Query: 337 AQVKT 341 K Sbjct: 283 KYSKK 287 >UniRef50_Q82LC4 Putative ribosome biogenesis GTPase rsgA n=23 Tax=Actinomycetales RepID=RSGA_STRAW Length = 370 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 97/312 (31%), Positives = 142/312 (45%), Gaps = 15/312 (4%) Query: 41 EGIVISRFGMHADVESADGDVHR----CNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGI 96 G VI DV + G + +R + TGD V A E Sbjct: 40 AGRVIRVDRGQCDVVTPGGMLRADTAFVTPHDPMRVVCTGDWV-------AVEPAGDPRY 92 Query: 97 VEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 V R S R + +AAN+D V+ ++ EL L ++R+L + Sbjct: 93 VRTYLPRRSAFVRSTSSKRSEGQILAANVDYAVVAVSLAVELDLGRVERFLALAWESGAQ 152 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 P++VL K DL+ D Q G VL VSS+ +GL L L+G S+ G Sbjct: 153 PVVVLTKADLVPDATTLSYLVQDVETAAPGVPVLSVSSNLGEGLDVLAAVLSGGTSVLLG 212 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 QSG GKS+L NALLG + + D G G+HTTT L P GG +ID+PG+R G Sbjct: 213 QSGAGKSTLANALLGEDV-MKVHATRDVDGKGRHTTTTRNLLALPGGGVLIDTPGLRGVG 271 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 LW E + Q F E C++ DC H +PGCA+ A++ G++ E R ++Y ++L Sbjct: 272 LWDAET-GVNQVFSEIEALAAECRFHDCAHTAEPGCAVLAALDTGELPERRLDSYRKLLR 330 Query: 335 SMAQVKTRKNFS 346 ++ + + Sbjct: 331 ENQRIVAKTDAR 342 >UniRef50_D0L125 Ribosome small subunit-dependent GTPase A n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L125_HALNC Length = 321 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 110/327 (33%), Positives = 176/327 (53%), Gaps = 16/327 (4%) Query: 13 RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS 72 R+ + ++ + PD + VI+ G +E+A+G + R N RRT+ Sbjct: 4 RLTDRQKNQIANRQSAPDES------LERATVITHHGTELIIENAEGKLLRANARRTLGV 57 Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI 132 L TGDRV WR G+ A E I+E V+ R++ L RPD + + +AANIDQ++I+ A Sbjct: 58 LTTGDRVGWRTGEDARE------IIEFVYPRSNTLIRPDTHGKTRLMAANIDQVLIILAP 111 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD---DEGMAFVNEQMDIYRNIGYRVLM 189 P ++ N+++R LVA L PIIVLNK+DLL E A + + + ++ ++ Sbjct: 112 TPWMNPNVVERTLVAALDLPATPIIVLNKVDLLTTTQPEHRALIEQTLALWAAQDIDIVR 171 Query: 190 VSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 +S+ T +G+ L L +IS+ G SGVGK+SL ++ N++S +S GQHT Sbjct: 172 ISTRTGEGIDALRNVLNDKISMMIGLSGVGKTSLARSITAQAATAAINELSAHSQEGQHT 231 Query: 250 TTAARLYHFPH-GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP 308 T + L+ H G +ID+PGVR+F + + + I + F + G C++ +C H +P Sbjct: 232 TRHSTLFRLDHMPGGLIDAPGVRDFAVAAQDAQAIDRAFPDILRLAGGCRFYNCTHSQEP 291 Query: 309 GCAIREAVEEGKIAETRFENYHRILES 335 CA+R AV ++ RFENY + Sbjct: 292 NCAVRAAVANSQLDSRRFENYQSLKRE 318 >UniRef50_D1ALR3 Ribosome small subunit-dependent GTPase A n=10 Tax=Bacteria RepID=D1ALR3_SEBTE Length = 358 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 90/336 (26%), Positives = 158/336 (47%), Gaps = 25/336 (7%) Query: 26 KEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGD 77 ++ + + +L+ +I + V G++ I + GD Sbjct: 11 SDRFEQEASLYNNLFPARIIEQHRDLYKVVCEHGELI-AGISGKLAYHAEDQMSFPAVGD 69 Query: 78 RVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPE 135 V+ + +++ + R SV R + + +AANID I I ++ + Sbjct: 70 WVMIDRTDNNS----GNAVIKNILGRKSVFVRQTAGTSNEQQIVAANIDIIFICMSLNSD 125 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 195 ++ I+RYL P+IVL K DL DD ++E + +IG V++ SS + Sbjct: 126 FNIRRIERYLAVTWDSMATPVIVLTKSDLCDD-LQEKLDELSSV--SIGIDVIVCSSEDE 182 Query: 196 DGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAAR 254 +G + + + G+ F G SGVGKS+L+N L G + +I G+HTTT + Sbjct: 183 NGYQAVSSYIEKGKTIAFIGSSGVGKSTLINRLAG-DENQAVQEIRKGDDKGKHTTTYRQ 241 Query: 255 LYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIRE 314 L P+GG VID+PG+RE L+ I++ F + + CKY++C H ++PGC +R Sbjct: 242 LKLLPNGGIVIDTPGMRELQLY---TGDISKTFEDIEELAAQCKYKNCSHVSEPGCMVRN 298 Query: 315 AVEEGKIAETRFENYHRILESMAQ--VKTRKNFSDT 348 A+E G ++E RF +Y ++ M + +R+ + Sbjct: 299 AIENGILSEERFGSYLKLQREMEYSNLNSRQTEQEK 334 >UniRef50_Q3A0G9 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RSGA_PELCD Length = 364 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 138/321 (42%), Gaps = 28/321 (8%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRS-------LVTGDRVVWRPGKPAAEGVNVKG 95 VI G + ADG+ + +R GD V + Sbjct: 28 RVIRVGGGFYTLLGADGEQ-TATLAGQLRHGSTQDALPAVGDWVGIDSPQEGGI------ 80 Query: 96 IVEAVHERTSVLTRPDFYDGV---------KPIAANIDQIVIVSAILPELSLNIIDRYLV 146 + A+ R + L R + + +AAN+D +IV + + + I+RYL Sbjct: 81 RIHAILPRQTALKRATVSNRKGLVEKPGVPQVLAANVDIAIIVCGLNRDYNPRRIERYLT 140 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 P+IVLNK D+ E A E I G VL+ S+ DGL L L Sbjct: 141 LVHESGAMPLIVLNKSDIC-PETQARRAEIESI--AFGTPVLVTSAQCGDGLDELASHLK 197 Query: 207 -GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 G + G SG GKS+LLN L + + T++IS G G HTTT L+ P G VI Sbjct: 198 AGSTLVLIGSSGAGKSTLLNRLACAEHQ-QTSEISAAVGKGMHTTTHRELFPLPGGALVI 256 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG+RE LW + F E + C++ DC+HD +P C IR+A+ +G + R Sbjct: 257 DTPGLRELHLWGESEAGLASTFPEVIGFAAQCRFSDCQHDQEPDCGIRQALHDGTLDPAR 316 Query: 326 FENYHRILESMAQVKTRKNFS 346 E+Y + +A + + Sbjct: 317 LESYLKQRAEIASATLQSELA 337 >UniRef50_B2GD51 Putative ribosome biogenesis GTPase rsgA n=57 Tax=Lactobacillales RepID=RSGA_LACF3 Length = 296 Score = 302 bits (775), Expect = 9e-81, Method: Composition-based stats. Identities = 93/306 (30%), Positives = 145/306 (47%), Gaps = 23/306 (7%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIV 97 G + D+ S G ++R R R V GD+V + +G + Sbjct: 4 GTIQQSLSGFYDIWSG-GKLYRTRARGNFRKRGLKPVVGDQVEFEAENQ------REGYL 56 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPI 156 + R + L RP + AN+D V+V+A+ P LS N++DR LVA E+ I+P+ Sbjct: 57 LKILPRKNQLVRP--------MVANVDLAVVVTAVKEPNLSTNLLDRQLVALESQGIDPV 108 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQD-GLKPLEEALTGRISIFAGQ 215 I +K DLL D+ + + Y+ IGY VL + L L + LTG++ GQ Sbjct: 109 IYFSKTDLLSDQEADALMLVVKGYQMIGYPVLYQRPPFGEEALGELRKILTGKVVTMMGQ 168 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 +G GKS+LLN L + T +IS G+HTT L + D+PG + Sbjct: 169 TGAGKSTLLNHLAP-DLNLATGEISQALKRGRHTTRKVSLMQV-GDALIADTPGFSSYED 226 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 + + E++ F E CK+R C H +P CA++ A++ GKI +R++NY + E Sbjct: 227 FQMTVEELPHFFPEMQALAPECKFRGCLHIKEPSCAVKNALKHGKIMNSRYDNYLQFHEL 286 Query: 336 MAQVKT 341 +A K Sbjct: 287 IANQKP 292 >UniRef50_B3EBY9 Ribosome small subunit-dependent GTPase A n=1 Tax=Geobacter lovleyi SZ RepID=B3EBY9_GEOLS Length = 333 Score = 302 bits (775), Expect = 9e-81, Method: Composition-based stats. Identities = 95/319 (29%), Positives = 152/319 (47%), Gaps = 30/319 (9%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNVK 94 +I V A+G++ +R V GD V+ +P + + Sbjct: 27 RIIRGEKNFFRVLCAEGEL-TVRFTGRMRHGAGTRADLPVVGDWVMVQPQP------DGR 79 Query: 95 GIVEAVHERTSVLTR---------PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYL 145 G++ A+ ER S R + IAAN+D +++VS + + +L I+RYL Sbjct: 80 GMIHAILERKSSFARNLPGRRKIKGRERAEQQVIAANVDLVLVVSGLDRDFNLRRIERYL 139 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 E ++VLNK DL ++ + ++ V + L+ L L Sbjct: 140 TLVGGSGAEAVVVLNKADLCENPQRCLAQVKEIAPKS---PVYSCEARDPRQLEFLLPHL 196 Query: 206 T-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 GR G SGVGKS++LN LLG Q++ ++S G G+HTTT L+ P GG + Sbjct: 197 QPGRTLALLGSSGVGKSTILNGLLGEQRQ-KIGEVSQADGKGRHTTTHRELFQLPQGGIL 255 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID+PG+RE LW + E + + F + + G CK+ DC+H +PGCA+ AVE G+I Sbjct: 256 IDNPGMRELHLWG-DEEDLVESFSDIEELSGKCKFSDCRHQVEPGCAVLRAVEIGEITHE 314 Query: 325 RFENYHRILESMAQVKTRK 343 R NYH++ + ++ R+ Sbjct: 315 RLGNYHKLKAELTSLQRRR 333 >UniRef50_Q39XI8 GTPase EngC n=2 Tax=Geobacter RepID=Q39XI8_GEOMG Length = 358 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 20/302 (6%) Query: 43 IVISRFGMHADVESADGDV---HRCNIRR----TIRSLVTGDRVVWRPGKPAAEGVNVKG 95 V + + +A G+ +R+ + + GD VV P +E Sbjct: 29 RVTAELRGEYRLRAAAGEFPAQLAPRLRKGAADRLDRPMVGDWVVIEPVNGGSEVT---- 84 Query: 96 IVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 + + R ++L R V+PIAAN+D + IV + + ++RYLVA Sbjct: 85 -IHDILPRRTLLARRGAGGGGEVQPIAANVDLVFIVMGLDGNYNPRRLERYLVAARESGA 143 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIF 212 EP+++L+K DL D G RV+ VSS +G+ + E L +G + F Sbjct: 144 EPVVILSKADLCPDAAERVAEAAAL---GPGVRVVPVSSLAGEGVSAVREVLASGVTACF 200 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SGVGKS+L+N L G ++ + T + + G+HTTT ++ P G VID+PG+RE Sbjct: 201 VGSSGVGKSTLVNRLAG-EEVMATGAVRERDAKGRHTTTHRQMILLPCGAIVIDTPGMRE 259 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 FGLW E + F E + C++ DC H +PGCA+R+A+ G+I + R+ +Y ++ Sbjct: 260 FGLWQAG-EGLDASFPEIAELAKQCRFHDCSHAHEPGCAVRDALAGGEIDQGRYASYLKL 318 Query: 333 LE 334 + Sbjct: 319 RK 320 >UniRef50_Q2S3I5 Ribosome small subunit-dependent GTPase A n=2 Tax=Rhodothermaceae RepID=Q2S3I5_SALRD Length = 324 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 106/324 (32%), Positives = 160/324 (49%), Gaps = 17/324 (5%) Query: 29 PDYDDNLFGEPDEGIVISRFGMHADVESADGDV---HRCNIR----RTIRSLVTGDRVVW 81 P D G EG+V S G DV+ D + R R + GDRV Sbjct: 4 PPPTDTSDGPLLEGVVTSSTGSWYDVQVGDRTIPSRMRGKFRLTRQDVTNPIAVGDRVTL 63 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY---DGVKPIAANIDQIVIVSAIL-PELS 137 R + G + +HERT+ L+R + AN+D+I V A+ P L+ Sbjct: 64 RVADE-----DQTGFITDIHERTNKLSRRAAGPREGQEHVLVANVDRIWSVQAVRRPALN 118 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 +DR LV + +++NKIDL+ + + V + Y ++GY VL S+ + G Sbjct: 119 PRFLDRLLVGAAAQDVPAGLIINKIDLMTQDDLPDVMDLHLRYADLGYPVLATSATEELG 178 Query: 198 LKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 L L +A G+++ G SG GKS+LLNAL E+ T +S + G HTTT A L+ Sbjct: 179 LDRLRDAFDGQVNAITGPSGAGKSTLLNALEP-DLELRTGSVSSTTEKGTHTTTHAELHA 237 Query: 258 FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVE 317 V+D+PGVREFG+ + P+ + F + Y+ C++ DC HD +P CA++ AVE Sbjct: 238 LSDDSYVVDTPGVREFGVRDVHPKDLAHYFPDLSPYVNACQFPDCTHDHEPNCAVKAAVE 297 Query: 318 EGKIAETRFENYHRILESMAQVKT 341 G + R E+Y ILES+ + + Sbjct: 298 RGDVHAERHESYLAILESLREEQA 321 >UniRef50_B6YS07 Putative ribosome biogenesis GTPase rsgA n=16 Tax=Bacteroidetes RepID=RSGA_AZOPC Length = 311 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 87/317 (27%), Positives = 165/317 (52%), Gaps = 19/317 (5%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVN 92 +G+VI G +++ G++ + ++ R + GD V+ + Sbjct: 2 KGLVIKNTGSWYQLKTDRGELIKAKLKGNFRLKGIQSTNPISIGDYVLIEKD------LY 55 Query: 93 VKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACE 149 + + +R + + R + IA N+DQ ++ + P + IDR+LV E Sbjct: 56 GTAFISTIEDRKNYIIRRASNLSKQSHIIATNLDQAFLIVTVNYPITTTIFIDRFLVTTE 115 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 +I ++ NK DL ++ M + + + +Y++IGY +++ + L +E+ L G+I Sbjct: 116 AYRIPTLLFFNKTDLYNNHDMNYADILIHLYKSIGYSCYKIAATKDEDLLFMEKLLRGKI 175 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG-GDVIDSP 268 ++F G SGVGKS+++N L+ K+ IS + G HTTT +++ P G +ID+P Sbjct: 176 TLFYGHSGVGKSTIVNRLIPNAKQ-KVQSISKHHNKGMHTTTFSKMLELPSSSGYIIDTP 234 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G++ FG++ +E E+I+ F + + CK+ +C H +P CA+REA++ I+++R+ + Sbjct: 235 GIKGFGIFDIEKEEISHYFPDIFRFSPYCKFYNCTHQKEPACAVREAIKNHYISKSRYIS 294 Query: 329 YHRILESMAQVKTRKNF 345 Y ILE + K R+ F Sbjct: 295 YINILEDVDMNKYREAF 311 >UniRef50_B3QWC8 Ribosome small subunit-dependent GTPase A n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QWC8_CHLT3 Length = 383 Score = 299 bits (767), Expect = 7e-80, Method: Composition-based stats. Identities = 91/318 (28%), Positives = 159/318 (50%), Gaps = 25/318 (7%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNVK 94 +I + + ++ + GD VV + N Sbjct: 57 RIIEVNKNNYKISDGQHEIF-AELSGKFLFAIETILDYPTVGDWVVVQCFD-----NNSH 110 Query: 95 GIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 I+ + R S+L R D + + IAANID +I+ A+ +LN ++RYLV Sbjct: 111 AIIHHILPRKSLLKRKDPGKAIDFQLIAANIDYALIMQAVDSNFNLNRLERYLVMIHESH 170 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISI 211 I+PII+L+K DL+ + +A + E + ++ N Y +L +S+ T+DG++ L++ L + + Sbjct: 171 IQPIIILSKTDLISENELAIMMENI-LHFNKKYLLLSISNITEDGIRSLQKELQSDKTYC 229 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 G SGVGK++L N LLG + N++ + G+HTTT +L G ID+PG+R Sbjct: 230 LLGSSGVGKTTLFNKLLG-EARFGVNEVREKDSKGRHTTTRRQLLRLESGSIFIDTPGMR 288 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 E G + ++ + + F E C+++DC H + GCA+++AV G I E R++N+ + Sbjct: 289 EIGTFAIDS-GLDETFDEIVSLSRECRFQDCSHTHEDGCAVKDAVLNGTIDEARYQNFLK 347 Query: 332 ILE-----SMAQVKTRKN 344 I + M+ ++ RK Sbjct: 348 IQKESNYYEMSYLEKRKK 365 >UniRef50_A1ZFA4 Ribosome small subunit-dependent GTPase A n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFA4_9SPHI Length = 357 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 86/324 (26%), Positives = 155/324 (47%), Gaps = 28/324 (8%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRSLV--------TGDRVVWRPGKPAAEGV 91 + G V + + S+ G++ + I ++ GD V + Sbjct: 29 EAGRVAIENKNNYTIFSSQGEL-KGEISGRLQYTAHSEADLPKVGDWVSMQV-------F 80 Query: 92 NVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACE 149 + + I+ V R++V TR + IAANID ++IV + +L ++RYLV Sbjct: 81 DQQAIIHGVLPRSTVFTRNAAGKRNQAQVIAANIDYLLIVQSADQNYNLRRLERYLVMAA 140 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG--YRVLMVSSHTQDGLKPLEEALT- 206 I P++VL+K+DL D ++M+ ++ V+ VS+ + G K L + + Sbjct: 141 EGGIAPVVVLSKVDLATD-----WQQKMEELQSFDADLPVISVSNTSAIGYKALSQWIKP 195 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 G+ G SGVGKS+L+N LL ++ T + D G+HTTT ++ +G +ID Sbjct: 196 GKTLAVVGSSGVGKSTLINHLLDTPQQ-ATQTVRDKDDKGKHTTTRREMFITQNGSILID 254 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG+RE LW + I Q F + C + DC H + CA+ A++ G+++E R+ Sbjct: 255 TPGMRELQLWE-SKQGIGQVFTDVEVLAQDCHFGDCSHTNEIKCAVLAALDSGELSEERY 313 Query: 327 ENYHRILESMAQVKTRKNFSDTDD 350 ++Y ++ + +++ +F D Sbjct: 314 QSYLKLQKEADYLESSADFLRKKD 337 >UniRef50_A9KMS1 Ribosome small subunit-dependent GTPase A n=4 Tax=Clostridium RepID=A9KMS1_CLOPH Length = 359 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 85/284 (29%), Positives = 151/284 (53%), Gaps = 23/284 (8%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY-------DGVKPIAANIDQ 125 GD V+ + + + I+ + R S TR + +G++ IA+N D Sbjct: 66 PAVGDFVLIKHNELGDD------IIYRILNRKSYFTRNNPGFGNYTGNEGLQSIASNFDY 119 Query: 126 IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI-- 183 + ++ ++ + ++ ++RYL PII+L K DL DD V+E++ I + Sbjct: 120 VFLMESLNQDFNVRRMERYLSTAYDSGATPIIILTKADLCDD-----VSEKIAIMEQVSF 174 Query: 184 GYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 G +V+ +S+ T +GL L E L G +F G SG+GKSSL+NAL G + + ++I ++ Sbjct: 175 GVKVVAISAITGEGLDQLVEYLTEGTTFVFLGSSGIGKSSLVNALAGKEM-MKVSNIRED 233 Query: 243 SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDC 302 G+HTTT L +G +ID+PG+RE GL ++E ++ F + CK++DC Sbjct: 234 DDKGRHTTTHRELISLENGVMIIDTPGMRELGLSNVES-GLSSTFQDIDSLSEYCKFQDC 292 Query: 303 KHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 KH+ +PGCA+ +A+E+G ++ R +YH++ + + + Sbjct: 293 KHEKEPGCAVNKAIEDGTLSLDRLRSYHKLQREVRHSSAKAAYQ 336 >UniRef50_A0Q5F4 GTPase n=18 Tax=Francisella RepID=A0Q5F4_FRATN Length = 295 Score = 296 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 116/301 (38%), Positives = 169/301 (56%), Gaps = 11/301 (3%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR-SLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 + VI+ FG + V+ + R ++ L GD V E N ++ Sbjct: 2 QAKVITNFGGNICVKLTTSEKVSALQRSHLKGELTVGDNVEL-------EYTNATYVITK 54 Query: 100 VHERTSVLTRPDFYDGV-KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIV 158 + +R ++++RP+ Y K IAANID VI+ P + IDRYL A IEPIIV Sbjct: 55 LLDRKNLISRPNQYQRKNKNIAANIDSAVIIITHSPAPVEHYIDRYLAALHNSDIEPIIV 114 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 +NKID + + +DIY+NIGY++ +S+ G+ L E L + SIF GQSGV Sbjct: 115 INKIDDQSENDRQHLQCIIDIYKNIGYKIFYISAKNNIGIDSLLEELKDKTSIFIGQSGV 174 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKS LN +LG +K T ++SD++ G+HTTT + LY ++IDSPG+REFGLWH+ Sbjct: 175 GKSETLNTILG-EKITATTEVSDSTKKGRHTTTCSTLYEINGSTNIIDSPGIREFGLWHI 233 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKH-DTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 E++ GF++F Y G+C++R+C H + GC I + V G I RF+NYHRIL + Sbjct: 234 SQEELFDGFLDFKKYKGMCQFRNCSHEEGSKGCEIVKQVSLGNINPVRFKNYHRILAEIK 293 Query: 338 Q 338 Sbjct: 294 N 294 >UniRef50_Q1WUA8 GTPase n=2 Tax=Lactobacillus salivarius RepID=Q1WUA8_LACS1 Length = 296 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 91/312 (29%), Positives = 142/312 (45%), Gaps = 27/312 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 +G + + DV D + +R R R V GD V ++ N Sbjct: 2 TTKGRIKQSLSGYYDVLVEDKE-YRTRARGNFRKKKMTPVVGDWVDFKIDD------NGD 54 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G + ++ R + L RP ANID ++VSA P+ S N++DR LV E+ + Sbjct: 55 GYILKIYPRKNQLVRP--------PIANIDTAIVVSACVEPDFSPNLLDRQLVMLESNNV 106 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQD---GLKPLEEALTGRIS 210 P++ +K DLL+ E + Y Y +S ++ L L LT I Sbjct: 107 RPVLFFSKADLLNQEQREKFESYFNYYSK--YYSCYISFENENRQNVLNNLMCDLTNEIV 164 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 + GQ+G GKS+LLN L + T IS G+HTT L +G + D+PG Sbjct: 165 VVMGQTGAGKSTLLNDLKP-DLNLETGKISKALSRGKHTTRKVTLLDI-NGVMIADTPGF 222 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 F L ++ + + + +F Y CK+R C H +P CA+++AV +G+I E R+ NY Sbjct: 223 SSFELLNITKDTLPLMYPDFVKYQDNCKFRGCLHLKEPKCAVKDAVNKGEILENRYINYV 282 Query: 331 RILESMAQVKTR 342 + + +A K R Sbjct: 283 QFQDMLANKKVR 294 >UniRef50_B1C5S8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S8_9FIRM Length = 292 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 84/308 (27%), Positives = 151/308 (49%), Gaps = 25/308 (8%) Query: 41 EGIVISRFGMHADVES-ADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKG 95 +G ++ G V S D + R R GD V++ +G Sbjct: 3 KGKILKGVGSFYTVYSYEDKKEYTLKARGIFRKQKITPTVGDEVLFTAVNTD------EG 56 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 +E + ER S+L RP +N+D I+IV A+ P++S ++D+ ++ + Sbjct: 57 SIEEIIERKSLLIRPSI--------SNVDNIIIVCAVKEPDISFFLLDKMIINAGIKNAD 108 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 I NK DL DD ++ E+ Y+N G+ ++ S+ T +G+ ++ L + S+F G Sbjct: 109 LTICFNKCDLADDTFKDYLKEE---YKNSGFNLIFTSNVTGEGIDEVKSLLKDKSSVFMG 165 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SG GKSSL+N+L + T+ +S G+HTT + L+ + D+PG Sbjct: 166 VSGAGKSSLINSLF-EGYNLETSHVSRKIKRGRHTTRHSELFMEDENTFIADTPGFSSLE 224 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 ++ +E E + + EF Y+ CK+ +C H +P C +++AV+EG I++ R++ Y +I E Sbjct: 225 VFDVEKEDLYHYYNEFIPYIN-CKFPNCVHINEPVCGVKDAVKEGNISKLRYDTYKQIYE 283 Query: 335 SMAQVKTR 342 + + + Sbjct: 284 EIKSKENK 291 >UniRef50_C4FT82 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT82_9FIRM Length = 330 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 92/318 (28%), Positives = 153/318 (48%), Gaps = 23/318 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK-G 95 EGI+ V S G + R R + GD V + + + G Sbjct: 23 EGIISQSLSGFYSVRSE-GQTYVTKPRGNFRHQQLKPLVGDHVTFEWEEGLDPKADQALG 81 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 + V R + RP N+D ++V ++ P+ S +++D++L + + IE Sbjct: 82 RLIEVLPRRNQFVRPS--------VVNVDDALVVMSLVEPDFSYSLVDQFLASVTSHGIE 133 Query: 155 PIIVLNKIDLL-----DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 P +VL K DLL + + V + +Y GY V ++ + D L L + L + Sbjct: 134 PHLVLTKYDLLLAQEGEKQAQDRVAQIQALYEAAGYTVTVMDPAS-DALANLSQLLHQGL 192 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 + GQSGVGKS+LLN LL Q +I T +IS G G+HTT LY + + D+PG Sbjct: 193 YVVMGQSGVGKSTLLNQLLP-QADIETGEISHYLGRGRHTTREVNLYPL-NQALIADTPG 250 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +E EQ+TQ F E + C++R C H +PGCA+++A+E G +A +R+++Y Sbjct: 251 FSALDFEQIEKEQVTQLFPEIQELSQECRFRSCLHLEEPGCAVKQALEAGSLAASRYQSY 310 Query: 330 HRILESMAQVKTRKNFSD 347 ++++ + Q K + + Sbjct: 311 CQLVQKIDQRKPQYHLKK 328 >UniRef50_Q08XU7 Ribosome small subunit-dependent GTPase A n=2 Tax=Cystobacterineae RepID=Q08XU7_STIAU Length = 361 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 87/314 (27%), Positives = 146/314 (46%), Gaps = 22/314 (7%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNV 93 G V+ + V++A+ + + GD V + E Sbjct: 30 GRVVRQARGLLSVQTAE-RLFLARTSGRLLHQAAGIEALPTVGDWVALTLPQGEGE---- 84 Query: 94 KGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 +++AV R VL R + + IAAN+D + +V+ + + I+R L Sbjct: 85 -ALLQAVLPRRGVLVRREAGSEHEGQLIAANLDVVFLVAGLDGNFNPRRIERGLAVAWKS 143 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRIS 210 P+++L+K DL +D + G V +S+H GL + L G+ Sbjct: 144 GATPVVLLSKADLHEDVPARLAEVRAL---APGVSVFALSTHLGTGLDEVRACLPPGKTG 200 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 + G SGVGKS+L+N LL ++ + T + + G+HTTT L+ P GG +ID PGV Sbjct: 201 LLLGSSGVGKSTLVNRLL-EEERLATQSVRVDDNKGRHTTTHRELFMLPQGGLLIDGPGV 259 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE GLW E E + Q FV+ C++ +C H +PGCA+R VE G++++ R +++ Sbjct: 260 RELGLWG-EEEGVEQAFVDVLTLAAGCRFSNCGHQREPGCAVRAEVEAGRLSQERLDHFE 318 Query: 331 RILESMAQVKTRKN 344 ++ A + + N Sbjct: 319 KLQREQAHKERQTN 332 >UniRef50_Q7MGA2 Putative ribosome biogenesis GTPase rsgA 2 n=38 Tax=Proteobacteria RepID=RSGA2_VIBVY Length = 353 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 19/302 (6%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE 102 +++ + S G H I + GD V+ + + + E Sbjct: 38 RIVAHHRSGYQLCSEQGRFHLA-IHHAQPKMTVGDWVLLDEQQQ----------FKRLLE 86 Query: 103 RTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN 160 R S L+R + + IA N+D + IV ++ + +L+ I+RYL + IEP++VL Sbjct: 87 RQSELSRKAAGSKIAEQLIATNVDTLFIVCSLNDDFNLSRIERYLSIAKEAHIEPVVVLT 146 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVG 219 K DL Q V V++ + L+ GR F G SGVG Sbjct: 147 KADLSPQAEQNITQVQQLSATLW---VEAVNALDPASVSALQPWCTKGRTVAFIGSSGVG 203 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KS+L N LLG + + T I ++ G+HTTTA ++ P G +ID+PG+RE L Sbjct: 204 KSTLTNTLLGEETQ-QTGGIREDDSKGRHTTTARSVHMIPDGALIIDTPGMRELQLADCS 262 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 E +++ F E C+++DC+H +PGCA+++A+ G + R +NY ++ A Sbjct: 263 -EGVSETFAEIETLAQHCRFKDCQHQQEPGCAVQQAINNGTLEARRLQNYFKLQREQAYN 321 Query: 340 KT 341 + Sbjct: 322 AS 323 >UniRef50_UPI0001789FEF GTPase EngC n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789FEF Length = 357 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 89/331 (26%), Positives = 146/331 (44%), Gaps = 30/331 (9%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPG 84 + + G G V V + G+V +R GD V+ Sbjct: 13 EAIQGGLLPGRVTELRRERFRVMTERGEV-TAVLRGAFYHSAETRVDFPCVGDFVLLHYN 71 Query: 85 KPAAEGVNVKGIVEAVHERTSVLTRPDFYD---------GVKPIAANIDQIVIVSAILPE 135 + +++ V R S +R D+ + +A N D + I+S++ + Sbjct: 72 ESGDS------LIDRVLPRRSKFSRADYSGHAAGYAKTVREQVVATNFDYVFILSSLNWD 125 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 195 ++ I RYL +P+I+L K DL D + I V + SHT Sbjct: 126 FNVTRIMRYLTQARQSGGQPVIILTKADLAPDYNLLLAEVTQSI---PDVPVHAICSHTG 182 Query: 196 DGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAAR 254 G+ L+ L G+ +F G SGVGKSSLLNAL+ Q + I + G+HTTT + Sbjct: 183 LGMNELDPYLMPGKTVVFLGMSGVGKSSLLNALI-EQDVMKVQAIREVDSRGRHTTTHRQ 241 Query: 255 LYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIRE 314 L+ P G VID+PG+RE G++ + E I F + + C++ DC+H +PGCA+ Sbjct: 242 LFMLPSGTMVIDTPGMRELGIFDAD-EGIRASFTDVEAWFPQCRFTDCRHQAEPGCAVLA 300 Query: 315 AVEEGKIAETRFENYHRILESMAQVKTRKNF 345 A+ +G + R+E+Y V+ + ++ Sbjct: 301 ALADGSLPRERWEHYVAQKHENKYVQDKTSY 331 >UniRef50_A8MGJ8 GTPase EngC n=6 Tax=Bacteria RepID=A8MGJ8_ALKOO Length = 360 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 84/313 (26%), Positives = 148/313 (47%), Gaps = 24/313 (7%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRT--------IRSLVTGDRVVWRPGKPAAEGVNVK 94 V ++ V +G++ + I+ GD V+ N Sbjct: 30 RVSVQYRDLYKVIMENGEIF-AQVSGKMSYFSKDSIQYPAVGDWVLVDRDTDI----NGH 84 Query: 95 GIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 I+ + R S R + IA N+D + I ++ + ++ ++RY+ Sbjct: 85 AIIHHILTRKSCFERKIAGLKSDSQIIATNVDTVFICMSLNNDFNIRRLERYIAVAWESM 144 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISI 211 P++VL K DL +D + +G VL+ SS ++G +++ + GR Sbjct: 145 ATPVVVLTKSDLCEDIQQKLLEIGT---VAMGVDVLVTSSILEEGYSSIQKYIENGRTVA 201 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 F G SGVGKS+L+N L+G ++ + TN I D G+HTTT +L+ P+ G +ID+PG+R Sbjct: 202 FIGSSGVGKSTLINKLIG-EEVLKTNGIRD-DHKGKHTTTHRQLFVVPNLGVIIDTPGMR 259 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 E G+ + + + F + CK+ DCKH+ +P CA+REA+E+G + R ++Y + Sbjct: 260 ELGIVSAD---LERSFDDIEKIAKDCKFTDCKHEGEPHCAVREAIEKGDLDIERLKSYKK 316 Query: 332 ILESMAQVKTRKN 344 + + + R N Sbjct: 317 LQRELKYNELRAN 329 >UniRef50_C8WW82 Ribosome small subunit-dependent GTPase A n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW82_ALIAD Length = 292 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 25/307 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVK 94 EG V+ DV DG V RC R + +++ GD V + P + Sbjct: 1 MREGRVVRAISGFFDV-FDDGQVRRCRARGVFKVKGTTVLVGDFVRYEPVGAQ------E 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQI 153 GI+ V R + L RP AN+D +V+ + + P+LS ++D+ L+ + Sbjct: 54 GIIREVLPRRTELIRP--------PIANVDHVVVACSFVTPDLSFYMLDKTLLQASVAGV 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 EP I K DL+ E + +++YR +GY + V++ +G+ L L GR+++ A Sbjct: 106 EPTIAFTKADLVSPE---LASATVELYRRLGYEAVAVAAKQGEGVSVLRARLQGRVTVLA 162 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SG GKS+L NAL T ++S+ G G+ TT L + D+PG + Sbjct: 163 GPSGAGKSTLANALAPG-ISFKTGEVSEKIGRGRQTTRHVELVRLDDATWMADAPGFSQL 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + + ++ F EF C YRDC H + CA++ AVEEG + R+ +Y ++ Sbjct: 222 QVP-VASREVRLHFPEFRPLAQECAYRDCLHLDEDNCAVKRAVEEGHVPAPRYMSYRQLY 280 Query: 334 ESMAQVK 340 E + + Sbjct: 281 EEAREQE 287 >UniRef50_B9L2Y7 Ribosome small subunit-dependent GTPase A n=2 Tax=Thermomicrobia (class) RepID=B9L2Y7_THERP Length = 329 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 112/303 (36%), Positives = 163/303 (53%), Gaps = 8/303 (2%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRSLVTG-DRVVWRPGKPAAEGVNVKGIVEAVH 101 IVI G + DV + +G V RC +R ++ D VV +G++EAV Sbjct: 16 IVIRVRGPYYDVLTPEG-VLRCVVRGALKKERRREDLVVVGDRVVVRVVAPGEGVIEAVA 74 Query: 102 ERTSVLTRPDFY-DGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVL 159 R L R + + I AN+DQ+V+V A PELSL ++DR+LV E+ + +I L Sbjct: 75 PRRRALVRRARDREAAQVIVANLDQLVVVMAAAQPELSLGMLDRFLVVAESQDLPTVICL 134 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 NKIDL + + YR IGY V+ S + GL L + + G++S AG SGVG Sbjct: 135 NKIDL---DPAGRARAMLAPYRAIGYPVVETSVASGAGLHELWQTIEGKLSALAGPSGVG 191 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 K+SL+ A E+ +S+ +G G+HTTTA+ L ++D+PG+ LW + Sbjct: 192 KTSLVKAFRP-DLELRIGAVSEATGRGRHTTTASELIQLDERTFLVDTPGIGVLHLWAIL 250 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 PE++ + F EF YLG C YRDC+H +PGCA+R AVE G I R+E Y + + + Q Sbjct: 251 PEELDRCFREFRPYLGACPYRDCRHLDEPGCAVRAAVEAGVIDAGRYERYRALYQDLVQE 310 Query: 340 KTR 342 R Sbjct: 311 MER 313 >UniRef50_C6W757 Ribosome small subunit-dependent GTPase A n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W757_DYAFD Length = 354 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 91/312 (29%), Positives = 146/312 (46%), Gaps = 23/312 (7%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTI-------RSLVTGDRVVWRPGKPAAEGVN 92 + G V + G + SA G V + + GD V ++ + Sbjct: 26 EPGRVTAIEGFRHRLVSASGQV-DALLSGALMNGANHWELPKVGDWVAFK-------NYD 77 Query: 93 VKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACET 150 +GI+ +V R + L+R P + IA NID IV + + + + RY+V Sbjct: 78 NEGIIISVLPRANELSRKMPGRTTEKQVIATNIDTAFIVQGLDRDFNPMRLQRYIVQIMQ 137 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL--EEALTGR 208 I P+++LNK DL+ D Y VL++S+ ++GL+ E+ L G+ Sbjct: 138 CNIRPVVLLNKQDLVADPEYYRQQVTALGYE---CPVLLLSATGREGLQQWANEQLLPGQ 194 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 + G SGVGKS+L+NALLG + + +SD + G+HTT + L P G +IDSP Sbjct: 195 TYVLIGSSGVGKSTLVNALLGYRLQEE-GSVSDFNHKGRHTTVSRNLVMLPSGAMLIDSP 253 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G+REFG+ +Q C++ DC H +PGCAI AV+ G++ +++ Sbjct: 254 GMREFGVTLDADDQGMHYHPLLAALAADCRFHDCTHLHEPGCAITAAVQSGELPREVYDS 313 Query: 329 YHRILESMAQVK 340 Y +I A + Sbjct: 314 YLKISREQAHYQ 325 >UniRef50_C0A6W9 Ribosome small subunit-dependent GTPase A n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6W9_9BACT Length = 378 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 97/317 (30%), Positives = 145/317 (45%), Gaps = 21/317 (6%) Query: 43 IVISRFGMHADVESADGDVH-RCNIR------RTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 +V+ + V++AD ++ C R + GD V + + Sbjct: 32 VVVELRRHYYAVQTADAELLGECTGRFHHQANTAVDYPAVGDWVAVLR-----QPDGRRA 86 Query: 96 IVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 + A+ R S +R D + IAANID + +VS + + I R+LVA Sbjct: 87 HIHALLPRRSAFSRRAAGDEEVEQLIAANIDTVFLVSGLDRNHNPARIQRFLVAARESGA 146 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIF 212 EP++VLNK DLL D A + G VL+ S T+ GL+ L+ GR F Sbjct: 147 EPVVVLNKSDLLSDPRAADAVRREIEQLVPGVTVLVTSIETRKGLRILQRYAKPGRTLAF 206 Query: 213 AGQSGVGKSSLLNALL-----GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 G SGVGKSSL+NAL + T ++ + G+HTTT L G VID+ Sbjct: 207 VGSSGVGKSSLINALACDDGNDDDSALPTAEVREKDSKGRHTTTRRELVVSRSGALVIDT 266 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+RE LW + + + + F + CK+ C H +PGCA+R AVE G +A R E Sbjct: 267 PGMRELQLWDAD-DGVEEAFADIAALAVRCKFGRCHHRNEPGCAVRAAVESGALAAERLE 325 Query: 328 NYHRILESMAQVKTRKN 344 +Y ++ + R+ Sbjct: 326 SYRKLKAEQVAARARQK 342 >UniRef50_Q8EZ61 Putative ribosome biogenesis GTPase rsgA n=3 Tax=Leptospira RepID=RSGA_LEPIN Length = 359 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 89/332 (26%), Positives = 163/332 (49%), Gaps = 24/332 (7%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGD---VHRCNIRRTIRSLVTGDRVVWRPGKPAA 88 + L G V++ +G ++ + G+ + + + S+VTGD V+ R Sbjct: 21 EPKLLEGLKPGRVLAVYGEYSKIIIEQGEKKGIFSGALMASGESIVTGDWVLIR-----E 75 Query: 89 EGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 + IVE + R + L R P G + IA+NID ++++ + + S I+RYL Sbjct: 76 IEGDELCIVEKILPRKTFLRRSNPGKRKGSQAIASNIDLLLVIMGLDNDYSPRRIERYLF 135 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL- 205 + + IVLNK DL D F+ + + M+S+ + + + + Sbjct: 136 LAKVSGAQVTIVLNKKDLCMDPENKFMEIKTIAGET---PIEMISALDLKQTRTILQWID 192 Query: 206 TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 G+ F G SG GKS+++N+LLG + + TN++ + G G+HTTT L+ P GG ++ Sbjct: 193 PGKTITFLGSSGAGKSTIINSLLGGEIQ-KTNEVKVSDGTGKHTTTRRELFLLPSGGVLM 251 Query: 266 DSPGVREFGLW-HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 D+PG+RE GL+ +++ + F E C++ DC H+ +P C + AV++G+I+E Sbjct: 252 DNPGIREVGLFSEGSEDELEEVFPEIAVAAEECRFNDCSHNEEPNCGVVAAVKDGRISEA 311 Query: 325 RFENYHRILESM--------AQVKTRKNFSDT 348 R+ +Y ++ + + + +K D Sbjct: 312 RYFSYLKLSKELMAYQALNDPEEARKKKQKDK 343 >UniRef50_Q02DD4 Ribosome small subunit-dependent GTPase A n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02DD4_SOLUE Length = 353 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 86/275 (31%), Positives = 135/275 (49%), Gaps = 14/275 (5%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVS 130 V GD V R P + IVE V R + +R P + +PIAANID + +V Sbjct: 61 PVVGDWVAARVVGP------GQAIVEGVLPRRTFFSRRAPGRREDRQPIAANIDLVFLVC 114 Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMV 190 + + +L ++RYL PI+VLNK DL DD F ++ + Sbjct: 115 GLDGDFNLRRLERYLTLAAESGASPIVVLNKSDLCDDLPARFAETVQVSGAA---PIVTI 171 Query: 191 SSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 + + G+ PL L GR G SGVGKSS++N L G + T ++ ++ G+HT Sbjct: 172 HTRDEAGIAPLRAWLAPGRTVALLGSSGVGKSSIVNCLAG-DARLRTAEVRESDSRGRHT 230 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG 309 TT L P G +ID+PG+RE LW E + + Q F E C++ DC H + G Sbjct: 231 TTHRELIVLPGSGLLIDTPGMRELQLWAGE-DALDQVFDEIAALAAGCRFGDCSHVAEVG 289 Query: 310 CAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 CA+++A+ G +A R+ +Y ++ + + ++ + Sbjct: 290 CAVQQALAGGTLAPERWHSYLKLRAEVRRHESMAD 324 >UniRef50_C6BVN5 Ribosome small subunit-dependent GTPase A n=2 Tax=Desulfovibrio RepID=C6BVN5_DESAD Length = 370 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 35/333 (10%) Query: 31 YDDNLFGEPDEGIVISRFGMHADV-ESADGDVHR--CNIRRTIRS------LVTGDRVVW 81 + + + G V+S V + D R +R + V GD V+ Sbjct: 26 FQEKVSGADIPARVVSVNKDIFLVSQGVDDAQVRLSGKVRHKSGTDSENLFPVIGDWVLL 85 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG---------VKPIAANIDQIVIVSAI 132 R +++ V R + L+R + +AAN+D + IV + Sbjct: 86 R-----------DAVIDKVLPRRNALSRGAAGGRGKSHGAAMKEQVMAANLDTVFIVCGL 134 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS 192 + ++ I+RYL + P++VL K DL +D + V+E + G V +VS+ Sbjct: 135 DRDYNVRRIERYLTLVYNCNLSPVVVLTKADLHEDP-LECVDEVESV--AFGVPVHLVSA 191 Query: 193 HTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTT 251 + G+ LE+ L+ G+ + G SG GKS+LLN L G + T +S + G G+HTTT Sbjct: 192 DDESGVLELEQYLSSGKTATMIGSSGAGKSTLLNRLYGNSVQ-QTGAVSQSVGKGRHTTT 250 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 + P GG +ID+PG+RE + E + F + DY C++ DC H DPGC Sbjct: 251 GRDMIAMPQGGSLIDNPGIREIAFYS-EDGGVESSFADIEDYARYCRFSDCDHLNDPGCN 309 Query: 312 IREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 + +AVE G ++ R E+Y ++ + + R++ Sbjct: 310 VLQAVENGDLSTERLESYRKMKRELDYISQRQH 342 >UniRef50_Q6ANG3 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ANG3_DESPS Length = 357 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 91/326 (27%), Positives = 152/326 (46%), Gaps = 24/326 (7%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNI--------RRTIRSLVTGDR-VVWRP 83 D+ GE VI V + +G V R + T + V GD V + Sbjct: 21 DSHTGENIPARVIRGDRGSMLVATTNG-VLRAKPSARFLKANKGTTKLPVVGDWLVAFPS 79 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNII 141 P + EAV +R S++TR G + +AANID + IV I E +L + Sbjct: 80 DTPNVL------LFEAVLKRKSLITRGSAGKTSGAQALAANIDTVFIVHPIAEEPNLRRM 133 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 +R L P+++L K DL D + +G ++ +V+S T + + L Sbjct: 134 ERELSVAWDSGATPVVLLTKADLAADPDATLEMVKS---VAMGVKIALVNSKTAEAAELL 190 Query: 202 EEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 +TG ++ G SG GKS+L+N+L G +++ T + + G G+HTT A L Sbjct: 191 RSYITGYLTAVLIGPSGAGKSTLVNSLAGTERQ-ATGAVREGDGKGRHTTVARELIQISG 249 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 G +ID+PG+R GL E I+Q F + + C++RDC H + GCA+ A E G+ Sbjct: 250 HGIIIDTPGIRAIGLTG-STEGISQVFPDIEELSHSCRFRDCSHTEETGCAVTAAAESGQ 308 Query: 321 IAETRFENYHRILESMAQVKTRKNFS 346 ++ R +Y ++++ + + ++ Sbjct: 309 LSLERLASYLKLVQEVQEAAQKEEAQ 334 >UniRef50_Q6MJR6 Putative GTPase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJR6_BDEBA Length = 373 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 13/279 (4%) Query: 69 TIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQI 126 + GD V+ + ++ V R S R P + +AAN+D I Sbjct: 75 NLEYPGVGDWVICELHS-----NDEHAVIHEVLSRQSCFYRKEPGSGARAQIVAANVDVI 129 Query: 127 VIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR 186 + + + +L +DRY+ P+IVL K DL +D + E D R+ Sbjct: 130 FVAVSANQDFNLKRLDRYMSLAWESNASPVIVLTKADLAED-LKGLIAEVED--RHPAVP 186 Query: 187 VLMVSSHTQDGLKPLE-EALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGL 245 V VS+ + L+PL+ L G+ + G SGVGKS+L N LL + +I T I ++ Sbjct: 187 VHAVSALDPESLEPLKTHLLPGKTVVLLGSSGVGKSTLGNLLLEKE-QIKTQGIREDDDK 245 Query: 246 GQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHD 305 G+HTTT+ LY P G ++D+PG+RE GL E F + + C+++DC+H Sbjct: 246 GKHTTTSRSLYQLPSGALLMDTPGMRELGLLDH-REGFENLFDDILELATHCRFKDCQHQ 304 Query: 306 TDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 T+PGCA++ A+ ++ R+E++ + + + + N Sbjct: 305 TEPGCAVQAALASEELEVGRWESFQNLERELRYFERKTN 343 >UniRef50_Q8ETB7 Putative ribosome biogenesis GTPase rsgA 1 n=1 Tax=Oceanobacillus iheyensis RepID=RSGA1_OCEIH Length = 351 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 88/342 (25%), Positives = 162/342 (47%), Gaps = 26/342 (7%) Query: 14 VNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS- 72 +N Q+ + D +L V+ +++ +G ++ +R Sbjct: 3 LNEFQQKYAYRKEINYDGQIDLLA-----RVVMEQKERYILQTING-FKPAVVKGKMRHE 56 Query: 73 -------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP--DFYDGVKPIAANI 123 GD VV + I++ V R S + R + +A+N+ Sbjct: 57 AISREDYPAVGDWVVLQEKDFNDIV-----IIDQVLPRFSSIVRKVAGLRTDAQIVASNV 111 Query: 124 DQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI 183 ++ IV + +L+ ++RYL A P IV +K+DL D M + E D Sbjct: 112 TKVFIVISADEDLNERKLERYLTAVWESGASPHIVFSKVDLASD--MDSIIEHADSI-AF 168 Query: 184 GYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 G + ++ ++G + + + + G SG GKS+L+NALL +K + T + ++ Sbjct: 169 GIPLYKWNATNEEGKEDILANIHEDDSVVLIGSSGAGKSTLINALL-TEKVLKTGSVRED 227 Query: 243 SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDC 302 G+HTTT L++ P GG +ID+PG+RE LW + + ++ F + + + CK+ DC Sbjct: 228 DKRGRHTTTHRELFNLPTGGVIIDTPGMRELQLWTEDGDTLSHTFSDINHLIAECKFTDC 287 Query: 303 KHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 KHDT+P CA++EA+E G + E R+ +Y ++ +A ++ ++N Sbjct: 288 KHDTEPDCAVKEALETGDLEEGRWNSYLKLQRELAYIERKQN 329 >UniRef50_D1VSD9 Ribosome small subunit-dependent GTPase A n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSD9_9FIRM Length = 285 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 86/306 (28%), Positives = 152/306 (49%), Gaps = 28/306 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 +G ++ G ++S D + R T R S + GD V + N G Sbjct: 2 QGKIVKLLGGFYYIKSGD-KLIETRARGTFRYVKESPIVGDNVEFNYDD------NTLGY 54 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 ++ ++ R ++LTRP AN+D IV+ + P+ +L +ID+ +V E I+ Sbjct: 55 IQKIYPRKNILTRPK--------VANVDLIVLFIPLKNPDYNLTLIDKTIVQIEISNIDI 106 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +I +NK D+ ++ IY + G+ +++S T + L+E L G+ FAG Sbjct: 107 LIAINKADI----DISKAENLQKIYNSCGFNTILISGKTGLNIDTLKEKLRGKTVAFAGV 162 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SG GKS++ + +L K+I + ++S +G G+HTT L+ + + D+PG + Sbjct: 163 SGAGKSTISSLIL--DKKIESGEVSQKTGRGKHTTRHTELH-YNSDYFIFDTPGFSSLDI 219 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 L+ + + F EF +YLG CK+ +C H +P C I+ VE G+I +R+ENY + + Sbjct: 220 -KLDKKDLCHYFREFENYLGQCKFLNCNHINEPDCMIKRKVENGEIPISRYENYKYLYQE 278 Query: 336 MAQVKT 341 + + Sbjct: 279 LKNKEE 284 >UniRef50_Q07I14 Ribosome small subunit-dependent GTPase A n=8 Tax=Proteobacteria RepID=Q07I14_RHOP5 Length = 373 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 103/360 (28%), Positives = 163/360 (45%), Gaps = 30/360 (8%) Query: 6 LSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCN 65 L+ + R+N + + + + + V + V G R Sbjct: 11 LTNKDRHRMNTHDELKPLGWSNWFEPKLDRDCADRLARVAAVDRDLLLVMDQTGS-FRAK 69 Query: 66 IRRTIRS--------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--G 115 + GD V + +V AV ER + L R Sbjct: 70 LAGRFLHRTHLPEEMPCVGDWVCLEK-----RTEDDVAVVHAVLERRTSLRRKSANSDFQ 124 Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNE 175 + IA+N+D VIV + + +L ++RYLV IEP+I+L K DL+ E +A E Sbjct: 125 YQMIASNVDYAVIVQSCHFDFNLKRLERYLVMVNEGGIEPLILLTKTDLVSPEVLA---E 181 Query: 176 QMDIYRNIGY--RVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQK 232 Q R+ G V+ +S+ T G+ L + L + F G SGVGKS+++N L+G K Sbjct: 182 QTATIRSAGISAPVITLSNVTGAGIDALLQQLVPAKTYCFVGSSGVGKSTVINRLVGRAK 241 Query: 233 EILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD 292 + T +S N+G G+HTT L G VID+PG+REFG+ E I F + Sbjct: 242 -LDTGTVS-NTGEGRHTTVRRELILLDGGALVIDNPGMREFGIADAEA-GIETSFADLSA 298 Query: 293 YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES-----MAQVKTRKNFSD 347 C++ DC H +PGCA+REA++ G+I++ FENY ++ + ++ + RKN + Sbjct: 299 LATGCRFNDCSHSAEPGCAVREALKTGQISQAHFENYQKLRKEAAFLDLSNFEKRKNDRE 358 >UniRef50_C8WGD6 GTPase EngC n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGD6_EGGLE Length = 356 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 89/325 (27%), Positives = 148/325 (45%), Gaps = 22/325 (6%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRP 83 + + +P G ++S+ V G++ +R GD V+ Sbjct: 21 EASGIHDPVVGRILSQAHELYRVVGEQGELF-AEASGKLRHTACSAADFPAAGDFVLLDR 79 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNII 141 A + ++ V RTS R + + +AANID + +++ + +L + Sbjct: 80 ATDTA----GRAVIAQVLPRTSAFVRKAAGAALEQQVVAANIDVAFLCMSLVGDFNLRRL 135 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 +RYL P++VL K D D Q G VL VSS + G + + Sbjct: 136 ERYLTLAWESGAVPVVVLTKADACDSLERRLAAVQS---VAFGVDVLAVSSMGECGCEAV 192 Query: 202 EEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 L GR + G SGVGKS+L+N LLG ++ + T D+ G G+H TT +L P Sbjct: 193 RPYLRPGRTAALLGSSGVGKSTLVNRLLG-EEVLETRDVR-ADGRGRHATTRRQLVLLPG 250 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 GG V+D+PG+RE GL QGF + C++ +C H ++PGCA+ EA+ + + Sbjct: 251 GGLVMDTPGMRELGLGEA-AGGFEQGFADVERLFASCRFSNCTHTSEPGCAVYEAIADRE 309 Query: 321 IAETRFENYHRILESMAQVKTRKNF 345 ++E R++ Y ++ A + R + Sbjct: 310 LSERRWQAYRKLRAEAAFAEDRAGY 334 >UniRef50_C7HYF6 Ribosome small subunit-dependent GTPase A n=1 Tax=Thiomonas intermedia K12 RepID=C7HYF6_THIIN Length = 321 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 109/339 (32%), Positives = 161/339 (47%), Gaps = 24/339 (7%) Query: 9 GQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRR 68 R N + +++K P L ++ FG H + DG V C R Sbjct: 2 DDLERHNPQRPKGKRSTKSAPSTASGLTA-----RIVGAFGRHYLAQLDDGSVLACVPRG 56 Query: 69 TIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVI 128 +V GDRV PG +E VH R + L R D + K AAN+D++++ Sbjct: 57 KRAEVVCGDRVTLAPGDAPLA-------IEQVHARRNALWREDLW-RSKMFAANLDRVML 108 Query: 129 VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL 188 V+A P + +I R L+A + I ++LNK DL A +M +YR++GY +L Sbjct: 109 VTATYPGIQHGLIGRALIAADAADIPSTLLLNKCDL---PQAAAARAEMRLYRDLGYELL 165 Query: 189 MVSSHTQ--DGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLG 246 +S T+ L L L+G+ ++ G SGVGKSSL N LL Q + T +IS+ G Sbjct: 166 ELSVRTEPQAALAALTPRLSGQTTLLLGASGVGKSSLTN-LLAPQAQAPTREISEALSAG 224 Query: 247 QHTTTAARLYHFPH---GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 +HTTTA RLY P G ++DSPG + FGL HL Q+ GF E G C++++C Sbjct: 225 KHTTTATRLYDLPGFPPGSVLMDSPGFQSFGLHHLSVSQLQHGFPEIRARNGQCRFQNCT 284 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 H +PGC + I+ +R Y + + R Sbjct: 285 HRDEPGCVFTTDPQA--ISASRLALYRTLYAELTSAAPR 321 >UniRef50_A4XL75 Ribosome small subunit-dependent GTPase A n=2 Tax=Clostridia RepID=A4XL75_CALS8 Length = 290 Score = 289 bits (740), Expect = 9e-77, Method: Composition-based stats. Identities = 88/305 (28%), Positives = 149/305 (48%), Gaps = 26/305 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIV 97 G+++ V +G ++ C R R + GD V E ++ Sbjct: 5 GVIVKAIAGFYYVYDREGTIYECKARGVFRKDDITPLVGDNVTI------VEKAKGAYVI 58 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIEPI 156 + + R + L RP AN+D IV+V+++ PE+S +D+ LV +++P+ Sbjct: 59 DKILPRRNQLIRP--------PIANVDTAIVVVASVFPEVSFITLDKLLVNVLREKVKPL 110 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I +NK+DL + + + V Q I+ IG VS+ T +G++ L+E + G+IS+FAGQS Sbjct: 111 ICVNKVDLDNGKTLEVVKNQYGIFEVIG-----VSAKTGEGMEKLKEHIKGKISVFAGQS 165 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGK+S+LN L+ + +IS G+HTT L + D+PG + Sbjct: 166 GVGKTSILNCLIPG-LNLKVGEISKKIERGRHTTRVVELLRAGEDTYIADTPGFSSIEIT 224 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + +++ + EF+DY CK+ C H +P C ++ AV + KI R+E Y +I + Sbjct: 225 GMLKDELKYYYPEFYDY-ENCKFPGCNHIFEPECGVKAAVNDRKINFERYERYKQIFMQL 283 Query: 337 AQVKT 341 K Sbjct: 284 PAQKE 288 >UniRef50_Q73MQ9 GTPase YjeQ n=1 Tax=Treponema denticola RepID=Q73MQ9_TREDE Length = 315 Score = 289 bits (740), Expect = 9e-77, Method: Composition-based stats. Identities = 97/321 (30%), Positives = 161/321 (50%), Gaps = 27/321 (8%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVN 92 +G+V+ VE DG C+I+ + L GD V P + + Sbjct: 2 KGLVLKGSNNIFYVECEDGKFRSCSIKGKVLKDSALYYNPLAAGDFVNLEPDTHSDD--- 58 Query: 93 VKGIVEAVHERTSVLTRPDFY-DGVKPIAANIDQIV-IVSAILPELSLNIIDRYLVACET 150 +G++ + ER + R + + + +AANID +V +VSA P +DR LV E Sbjct: 59 -EGLITGLIERKNSFLRLNQKLNMPQLLAANIDLLVCVVSAANPPFRPRFVDRVLVQAEI 117 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 +I +IV+NK DL + +A V ++++ ++ + Y+ + VS+ G+ L E+L+ + S Sbjct: 118 QKIPVLIVINKCDL---KILADVRDRIEDWKRLDYKTIEVSAKEGRGMDNLIESLSSKTS 174 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF--------PHGG 262 GQSGVGKS+LLN + + T+ ISD G HTTT + H Sbjct: 175 ALVGQSGVGKSTLLNFIAP-DLNLKTSAISDKYDRGTHTTTQGEYFKIKALTSKGKEHSI 233 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR-DCKHDTDPGCAIREAVEEGKI 321 ++ID+PGVR F ++ +EPE F E +G CK+ C H + GCAI EA+++G I Sbjct: 234 NIIDTPGVRHFAIYGIEPEDTALYFPEMEKLIGSCKFGLSCTHTHELGCAILEALKKGNI 293 Query: 322 AETRFENYHRILESMAQVKTR 342 + R+ ++ I + + + + Sbjct: 294 HKDRYTSFELIHKELQETVKK 314 >UniRef50_Q5HPX0 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Staphylococcus epidermidis RepID=RSGA_STAEQ Length = 291 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 30/310 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 G ++ V +G+ R R S V GD V + +G Sbjct: 3 TGRIVKLISGVYQV-DVEGERFDTKPRGLFRKKKFSPVVGDIVDFEVQN------TKEGY 55 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQIEP 155 + VH+R + L RP +NID++VIV A+ PE S ++DRYLV + ++P Sbjct: 56 IHHVHDRNNELKRP--------PVSNIDELVIVMSAVEPEFSTQLLDRYLVIAHSYHLKP 107 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMV---SSHTQDGLKPLEEALTGRISIF 212 I++ K D+ ++ + + + + +Y+ IGY + S++T + + L + Sbjct: 108 RILITKHDIASEQEILKIKDTIKLYQKIGYATQFIGKDSNYTAT-VDEWSDGL----IVL 162 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 +GQSGVGKS+ LN+ Q ++ TNDIS + G+HTT LY GG + D+PG Sbjct: 163 SGQSGVGKSTFLNSYQP-QLKLETNDISKSLNRGKHTTRHVELYD-RKGGYIADTPGFSA 220 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 H+E EQ+ F++ H+ CK+R+C H +P C ++ VE+G+I + R+++Y ++ Sbjct: 221 LDFNHIEKEQLKDFFIDIHEAGEQCKFRNCNHIKEPQCHVKTLVEKGEIPQFRYDHYQQL 280 Query: 333 LESMAQVKTR 342 ++ K R Sbjct: 281 YNEISNRKVR 290 >UniRef50_B0MPP3 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPP3_9FIRM Length = 298 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 31/311 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 EGI+ G + V ADG V CN R R S GD V+ + A + Sbjct: 7 EGIITKAVGGNYYVAVADG-VLCCNARGVFRKEKISPCAGDNVIVSIEENAVP------L 59 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEP 155 + + ER + + RP AN+D ++V SA+ P + + D+ + E+ IEP Sbjct: 60 IVEIKERKNHIIRPPL--------ANLDCALLVTSAVDPVPNTLVTDKLISIFESKHIEP 111 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +IV+ K DL + E A IYR G++V + + T +G+ + ++G++S G Sbjct: 112 VIVITKQDLRECEDFA------GIYRKCGFKVFYMDNSTGNGIDAIRSYISGKLSALIGN 165 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSL+N L E T DIS G G+HTT A L+ GG + D+PG + Sbjct: 166 SGVGKSSLMNHLFPG-LERSTGDISKKLGRGRHTTRQAELFAID-GGYIADTPGFSTVEV 223 Query: 276 W---HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + ++ F EF +YLG C++RDC H + GCA+ EA+ EGKI +R+++Y ++ Sbjct: 224 SRYGFIPKNELQYSFREFSEYLGKCRFRDCVHLKESGCAVTEALREGKINSSRYDSYVKM 283 Query: 333 LESMAQVKTRK 343 E ++ + Sbjct: 284 CEEAERLNEWE 294 >UniRef50_Q6GHL4 Putative ribosome biogenesis GTPase rsgA n=58 Tax=Staphylococcus RepID=RSGA_STAAR Length = 291 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 91/307 (29%), Positives = 146/307 (47%), Gaps = 24/307 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 G ++ V +G+ R R S V GD V + +G Sbjct: 3 TGRIVKSISGVYQV-DVNGERFNTKPRGLFRKKKFSPVVGDIVEFDVQNIN------EGY 55 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQIEP 155 + V+ER + L RP +NID +VIV A+ P S ++DR+LV + Q+ Sbjct: 56 IHQVYERKNELKRP--------PVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHSYQLNA 107 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 I++ K D E +NE + IY NIGY + D K + EA + + + +GQ Sbjct: 108 RILVTKKDKTPIEKQFEINELLKIYENIGYETEFI--GNDDDRKKIVEAWSAGLIVLSGQ 165 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKS+ LN + + TNDIS + G+HTT L+ G + D+PG Sbjct: 166 SGVGKSTFLNHYRP-ELNLETNDISKSLNRGKHTTRHVELFE-RQNGYIADTPGFSALDF 223 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 H++ ++I F+E + Y CK+R+C H +P C ++ +E G IA+ R+++Y ++ Sbjct: 224 DHIDKDEIKDYFLELNRYGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDHYLQLFNE 283 Query: 336 MAQVKTR 342 ++ K R Sbjct: 284 ISNRKVR 290 >UniRef50_Q14LR6 Conserved hypothetical duf258 gtpase protein n=1 Tax=Spiroplasma citri RepID=Q14LR6_SPICI Length = 289 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 145/305 (47%), Gaps = 26/305 (8%) Query: 40 DEGIVISRFGMHADVE-SADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 G++I V+ D ++ C + R V GD V + + + Sbjct: 3 QTGMIIRIVSEFCYVKNDTDHQIYACKAKGLFRHQEIKPVVGDYVQFEIQN------DKQ 56 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQI 153 GI+ + R + L RP AN+DQ+VI++A P + ++++YL E + Sbjct: 57 GIIYQIEPRKNKLYRPRI--------ANVDQVVIITAMAEPTFNSYLLNKYLAFIEYKNL 108 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG--LKPLEEALTGRISI 211 +P+IV K DLL + + + + Y +GY V +S+ D + E+ +IS+ Sbjct: 109 KPVIVFTKKDLLKTDEL--YQKYFNWYPKLGYEVYFISNKKDDKKIWQQFEQLFQNKISV 166 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 GQ+G GKSS LN LL + I T +IS G G+HTTT + LY +G V D+PG Sbjct: 167 LTGQTGSGKSSTLNTLLQAEI-IKTQEISKALGRGKHTTTTSALYELLNG-MVADTPGFS 224 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 F L E ++ + + F+ Y CK+R C H +P C I+ V+ I + + +Y R Sbjct: 225 TFDLRDYEKGELARSYHFFNQYANECKFRTCLHLHEPHCKIKALVQANIIPQFFYNDYVR 284 Query: 332 ILESM 336 I++ Sbjct: 285 IMQEQ 289 >UniRef50_C7H5I2 Ribosome small subunit-dependent GTPase A n=8 Tax=Bacteria RepID=C7H5I2_9FIRM Length = 303 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 92/314 (29%), Positives = 146/314 (46%), Gaps = 32/314 (10%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 E +G ++ G V++ +G V C R R V GD V E N Sbjct: 10 ERMKGYIVKGIGGFYYVKTEEG-VIECKPRGIFRKQKITPVAGDEVTL-------ETENG 61 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 ++ + R +V RP AN+D + +V++ P S ++D+ Sbjct: 62 AAVIAEIAPRKNVFVRP--------PVANLDVLFLVASTTQPTPSTLVLDKLSAIAVDKG 113 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 ++P+IV K DL + E + Y + + + +GL + + ++GR+ F Sbjct: 114 VQPVIVCTKADLGEVEFLR------SAYERSTLPFIAIRYDSGEGLDEVRQWISGRLCAF 167 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SGVGKS+LLN LL Q E T+ IS G G+HTT ++ GG + D+PG Sbjct: 168 CGNSGVGKSTLLNTLLP-QAERETSAISQKLGRGRHTTREVTIFE-AFGGRIADTPGFAS 225 Query: 273 FGLW---HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 + E + F EF YLG C++ C H T+ GCAIR A+ EGK+++TR+++Y Sbjct: 226 LEANRAGFIPKENLEHAFPEFGPYLGQCQFTGCSHRTEKGCAIRAALAEGKLSQTRYDSY 285 Query: 330 HRILESMAQVKTRK 343 + E + VK + Sbjct: 286 CAMYEEVKDVKDWQ 299 >UniRef50_B8FMP2 GTPase EngC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMP2_DESAA Length = 360 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 86/321 (26%), Positives = 137/321 (42%), Gaps = 33/321 (10%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRS-------LVTGDRVVWRPGKPAAEGVNVKG 95 +I V D ++ R GD V+ R Sbjct: 28 RIIGVRKNAFIVHDGDREILATAAGRLYHDDSPDSLFPAAGDWVLIRDT----------- 76 Query: 96 IVEAVHERTSVLTRPDFYDG---------VKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 I+ V R + L+R + IAAN+D + IV + + ++ I+RYL Sbjct: 77 IIAHVLPRRNALSRGASGARHGRAESAVRGQVIAANLDTVFIVCGLDRDYNVRRIERYLT 136 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 P+++LNK DL + E + G V VS+ + G++ L + L Sbjct: 137 LIYNCGCSPVVILNKADL-HPAPLDCAAEVESV--AFGVPVFAVSAKSGQGVEVLRQFLP 193 Query: 207 -GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 G+ + G SG GKS+L+N L G + ++S+ G G HTTT + P G ++ Sbjct: 194 PGQTAALLGSSGAGKSTLVNQLSGAEVRAA-KEVSEAVGKGVHTTTTRDIIPIPGAGMIL 252 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG+RE LW + I F + C Y DC H+ +PGC +REAVE G + R Sbjct: 253 DNPGIREIALWD-DAGGIDDAFPDIQALAKECHYTDCTHEHEPGCRVREAVEIGVLKPAR 311 Query: 326 FENYHRILESMAQVKTRKNFS 346 +NY ++ + + + R+ S Sbjct: 312 LQNYLKMQKELEFLNQRQEKS 332 >UniRef50_C5NY56 Ribosome small subunit-dependent GTPase A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY56_9BACL Length = 293 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 91/309 (29%), Positives = 147/309 (47%), Gaps = 27/309 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVK 94 EG ++ V+ G++ C R R + + GD V + N Sbjct: 2 TKEGKILKALSGFYYVDC-SGELITCRARGNFRNENITPLVGDDVKIQLSD------NNT 54 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQI 153 G V + ER + L RP ANID I++VS PE S ++++ + E + Sbjct: 55 GYVVEILERKNELLRPK--------VANIDYSIIVVSVKDPEFSSKLLNKMICLNENSNV 106 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 + IIV K+DLL DE + + E M+ Y IGY+V S + ++ L++ ++ + + Sbjct: 107 DIIIVFTKLDLLSDEELNKMKEIMNYYYEIGYQVFTNS---DEDIEKLKQVISEKYVAIS 163 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQSG GKS+ +N L +I T +IS + G G+HTT Y + D+PG Sbjct: 164 GQSGAGKSTFINKLA-EHLDIETGEISKHLGRGRHTTRHTEFYQIDD-FYIADTPGFSSL 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + +E E + F EF+DY CK++ C H + C ++EAVE +I E+R+E+Y + Sbjct: 222 DITFIEKEDLQYLFREFNDY--DCKFKPCNHMEEIQCGVKEAVESKEILESRYEDYKVLF 279 Query: 334 ESMAQVKTR 342 K + Sbjct: 280 TEKQNQKRK 288 >UniRef50_C4V0Q2 Ribosome-associated GTP-binding protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0Q2_9FIRM Length = 288 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 97/308 (31%), Positives = 150/308 (48%), Gaps = 28/308 (9%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRT----IRSLVTGDRVVWRPGKPAAEGVNVKG 95 G ++ + V ++ C +R +L+ GD V + +G Sbjct: 3 QYGRILKVYNSVIHVSVNSAEIL-CKLRGKSTRGRDALLPGDIVRLER------ISSTEG 55 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVI-VSAILPELSLNIIDRYLVACETLQI- 153 ++E RTS+L RP AN+ QIV+ V+A P ++ R+LV E I Sbjct: 56 VIEGTEPRTSLLLRPR--------VANLTQIVVTVAAAAPNPHPLVVSRFLVLAEHSGID 107 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 ++ +NKIDL F Y GY VL+VS+ GL L+E L G I++FA Sbjct: 108 HIVLCINKIDLAGGNMTEFC----TPYEAAGYPVLLVSAVNGTGLSALQERLAGEITVFA 163 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SG GKSSLLNA + + +S+ G G+HTT A L F GG V+D+PG + Sbjct: 164 GPSGAGKSSLLNA-MDSSLALAVGAVSEKIGRGRHTTRRAELLPF-AGGYVVDTPGFTQQ 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 L + +++ F EF + C++ C H +P CA++ A EEG++A TR++ Y +L Sbjct: 222 ELTGIAADELADCFPEFLHF-PGCRFTPCSHSHEPNCAVKAAAEEGRLACTRYDAYIALL 280 Query: 334 ESMAQVKT 341 + + V+ Sbjct: 281 DEIRSVRR 288 >UniRef50_D2UC76 Probable gtpase engc protein n=1 Tax=Xanthomonas albilineans RepID=D2UC76_XANAL Length = 370 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 86/324 (26%), Positives = 137/324 (42%), Gaps = 30/324 (9%) Query: 27 EKPDYDDNLFGEPDE--GIVISRFGMHADVESADGDVHRCNI-----RRTIRS---LVTG 76 E+P + P V+ + V A + R S G Sbjct: 23 EEPVWQARFDAYPQARPARVVEQHRTGYVVADAVETAFKVESLPDWQRPRFPSHERAAVG 82 Query: 77 DRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILP 134 D V+ + + A+ R + + R + + IAANID + IV + Sbjct: 83 DWVLLDGTR-----------IVALLPRRTAIKRGAAGEHYHQQVIAANIDTVFIVCGLDA 131 Query: 135 ELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHT 194 + + I+RYL+ P++VL K DL + A +D +L V++ Sbjct: 132 DFNPRRIERYLLLVGGGGAAPVVVLTKADLTEYADDALA--VLDELAAQSIPLLTVNATQ 189 Query: 195 QDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAA 253 D + L L G+ + G SG GKS+L N LLG+ K + T + + G+HTTT Sbjct: 190 ADSVAVLRPWLQPGQTVVLVGSSGAGKSTLTNTLLGVHK-MRTAAVRERDSRGRHTTTHR 248 Query: 254 RLYHFPHGGDVIDSPGVREFGLWHLEPEQITQG-FVEFHDYLGLCKYRDCKHDTDPGCAI 312 L P G +ID+PG+RE E + +G F + C++ DC H +PGCA+ Sbjct: 249 ALLPLPSGACLIDTPGMRELKPTG--EEDLAEGAFADIEALAAQCRFNDCAHQAEPGCAV 306 Query: 313 REAVEEGKIAETRFENYHRILESM 336 + A+E G+I R NY ++ E + Sbjct: 307 QAAIERGEIDAARLANYLKLREEV 330 >UniRef50_O66555 Putative ribosome biogenesis GTPase rsgA n=7 Tax=Bacteria RepID=RSGA_AQUAE Length = 302 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 111/312 (35%), Positives = 165/312 (52%), Gaps = 28/312 (8%) Query: 38 EPDEGIVISRFGMHADV-ESADGDVHRCNIRRT---IRSLVTGDRVVWRPGKPAAEGVNV 93 E G+V+ R V DG +R R + GD V P Sbjct: 5 ELKRGLVVDREAQMIGVYLFEDGKTYRGIPRGKVLKKTKINAGDYVWGEVVDPNTFA--- 61 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQ 152 +E V ER ++L RP AN+D+++IV + PE + ++D LV E + Sbjct: 62 ---IEEVEERKNLLIRPK--------VANVDRVIIVETLKMPEFNNYLLDNMLVVYEYFK 110 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 +EP+IV NKIDLL++E + IYR+ GY VL VS+ T +G+ L + L G I I Sbjct: 111 VEPVIVFNKIDLLNEEEKKELERMDSIYRDAGYDVLKVSAKTGEGIDELVDYLEGFICIL 170 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SGVGKSS+L+ L G +E+ T ++S+ + G+HTTT RL F G V D+PG + Sbjct: 171 AGPSGVGKSSILSRLTG--EELRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTPGFSK 228 Query: 273 FG-LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 ++P ++ F EF Y CKY DC H +PGCA++EAV+ G+I+ R+++Y + Sbjct: 229 VEATMFVKPREVRNYFREFLRY--QCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLK 286 Query: 332 I----LESMAQV 339 I LE + ++ Sbjct: 287 IIKVYLEEIKEL 298 >UniRef50_A8RUS7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RUS7_9CLOT Length = 359 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 92/336 (27%), Positives = 150/336 (44%), Gaps = 29/336 (8%) Query: 15 NANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHR---CNIRRTIR 71 N Q + + E+ + L+ + VI+++ V + + R T Sbjct: 4 NELKQLQKYGATERFYTESKLYPDYQLARVIAQYRGKYKVITDQQEFFAEISGKFRYTTE 63 Query: 72 SLV----TGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQ 125 LV GD V+ K A + V R S+ R + + +AANID Sbjct: 64 ELVQFPTVGDFVMVTVEKEFAS-------IHQVLTRKSLFLRKAVGVSNQSQTVAANIDT 116 Query: 126 IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGY 185 + + ++ +LN ++RYL P+IVL K DL +D ++E++ +I Sbjct: 117 VFLCMSLNKNFNLNRMERYLSIAWDSGATPVIVLTKSDLCED-----LSERISQIESISC 171 Query: 186 --RVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 +++ S D + F G SGVGKS+L+N LLG+ I T +I Sbjct: 172 FSDIIVTSMFEDDISAKFLSYFSKNQTCAFIGSSGVGKSTLINRLLGVN-TIATQEI-AK 229 Query: 243 SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDC 302 G+HTTT ++ P GG VID+PG+RE G + +++ F E CK+R+C Sbjct: 230 GDKGRHTTTGREMFLCPLGGVVIDTPGMREMG---ADSTDLSKTFSELESLAYQCKFRNC 286 Query: 303 KHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 H +PGCA+ A+E G++ R ENY ++ + Sbjct: 287 THTNEPGCAVLAAIERGELDIRRLENYRKLQHESSY 322 >UniRef50_C8PML9 Ribosome small subunit-dependent GTPase A n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PML9_9SPIO Length = 316 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 147/316 (46%), Gaps = 27/316 (8%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVN 92 +G+V+S V + +G+V RC+I+ L GD V + Sbjct: 2 QGLVLSGANNFFVVRTPEGNVVRCSIKGKKLKEIRGYYNPLAPGDTVDIEYDTLHPD--- 58 Query: 93 VKGIVEAVHERTSVLTRPDFYDGV-KPIAANIDQIVIVSAI-LPELSLNIIDRYLVACET 150 +G + A+ R + R + + +AANID ++ V+ P DR LV Sbjct: 59 -QGQITALVPRRNGFIRWNQKTRSPQLLAANIDLLLCVTTPANPPFRPRFTDRTLVQAAA 117 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 I +I++NKIDL E V E++ ++ IG +V VS+ T++GL+PL L+G+ Sbjct: 118 EGISALIIVNKIDLGIPE---AVRERIRDWQRIGIQVCEVSAKTREGLEPLARLLSGKTC 174 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD------- 263 GQSGVGKSSLLN+L + T DIS G HTTT Sbjct: 175 AVTGQSGVGKSSLLNSLDPCHA-LKTADISFKYDRGIHTTTQGVFLPMTFTAQDGTQLSF 233 Query: 264 -VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR-DCKHDTDPGCAIREAVEEGKI 321 +ID+PG+R F LW ++PE++ F E C + C H + GC I E + G+I Sbjct: 234 NIIDTPGIRHFALWGIKPEEVIFYFPEMEAPALQCAFGLSCSHIHEQGCRILEELNAGRI 293 Query: 322 AETRFENYHRILESMA 337 R+E++ + + + Sbjct: 294 HPDRYESWRSMRDELT 309 >UniRef50_Q0F2Y7 GTP-binding protein, putative n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2Y7_9PROT Length = 366 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 21/314 (6%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNVK 94 V++ V + ++ + R GD V Sbjct: 28 RVVAIDRGRYLVHDGNNEL-SAELLGKFFYAAESAARFPCVGDWVCLEHHDS-----EQF 81 Query: 95 GIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 + V R ++L R + + + +A+NID IV + + ++ ++R+LV Sbjct: 82 ASIHTVLPRKTLLKRKTVGYDEEFQMLASNIDVAFIVMSCHYDFHVSKLERFLVMIHEAH 141 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RISI 211 IEP+++ K DL+ E + + + + I ++L +S+ T +G++ + + + Sbjct: 142 IEPVLLFTKSDLITPEALQLLIDDIRA-AGIDIKILALSNITGEGVEQVRRLIEPRKTYC 200 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 G SGVGKSSL+N L+G T +S SG G+HTT L HGG +ID PG+R Sbjct: 201 MLGSSGVGKSSLMNRLIGSDI-FETQTVST-SGQGRHTTVRRHLILLDHGGMLIDMPGMR 258 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 E + + E I F + + C++ DC H+ +P CAI+ A+ +GK+ + NY + Sbjct: 259 ELAVAEVS-EGIEGSFADILELAATCRFSDCSHNNEPDCAIQAALADGKLNADHYRNYLK 317 Query: 332 ILESMAQVKTRKNF 345 I + K + F Sbjct: 318 IQKESRHHKKQTAF 331 >UniRef50_A1R8G6 Ribosome small subunit-dependent GTPase A n=3 Tax=Arthrobacter RepID=A1R8G6_ARTAT Length = 395 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 85/309 (27%), Positives = 142/309 (45%), Gaps = 16/309 (5%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVH 101 G ++ V SA+ +H TGD V +VE V Sbjct: 55 GRIVRLDRNRLLVASANDLLHLPYPSH-GHVPATGDWVWL-----GHNTAGEPAVVE-VL 107 Query: 102 ERTSVLTRPDFYD---GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIV 158 R S L+R Y+ + + +NID + +V + L+ N ++R LVA P++V Sbjct: 108 PRHSALSRKRAYEASSEEQILGSNIDIVAVVVPVDRPLTHNRLERTLVAAWDSGATPLVV 167 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSG 217 + K DL + + G V+ S+ DGL L + + G + G SG Sbjct: 168 ITKADLAHLADDVVGEVIL---QAGGVDVVTTSAEQGDGLDELMQHIPDGATLVLLGPSG 224 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 GKS+L+NAL G + + T + G G+HTTT+ L G ++D+PGVR FGL+ Sbjct: 225 AGKSTLINALAGREVQ-QTGAVRAGDGKGKHTTTSRELVPLAGGAVLMDTPGVRGFGLFD 283 Query: 278 LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 + E + + F + D C++ DC H +PGCA++EA+ E + R+ +Y ++ +A Sbjct: 284 AD-EGMEEMFGDLEDLFSRCRFTDCAHQAEPGCAVQEALAEENLDPRRWASYLKLQRELA 342 Query: 338 QVKTRKNFS 346 + + + + Sbjct: 343 ALARKHDAA 351 >UniRef50_Q044G6 Putative ribosome biogenesis GTPase rsgA n=27 Tax=Lactobacillus RepID=RSGA_LACGA Length = 297 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 158/313 (50%), Gaps = 34/313 (10%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNV 93 +G ++S + DVE + +V R R R + GDRVV + + Sbjct: 2 NKAQGTIVSAISGYYDVEIEN-EVVRTRARGVFRDRKQKPLVGDRVVVQLDNQ-----GM 55 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQ 152 ++E + RT+ + RP AN+ ++++V SA+ P+ SL ++DRYL Sbjct: 56 NYLIE-ILPRTNEIGRPA--------VANVSKVLLVISAVEPDFSLELLDRYLTFFAWKN 106 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-----TG 207 + +I L+K D+ E + + ++D Y+ IGY V + + LE L Sbjct: 107 VGVVIYLSKADITPTEKLKAIKCKLDYYQKIGYSVF-------EDAEELERQLPTMIQKD 159 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 +I AGQSG GKS+LLN L + T IS G+HTT +L+ + G + D+ Sbjct: 160 QIWTLAGQSGAGKSTLLNKLEN-EANQETGAISTALNRGKHTTRQVKLFKYSSG-FIADT 217 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG L+ ++ +++ F + D CK+R C+H +PGC +++ +EEGKIA++R++ Sbjct: 218 PGFSAIDLFKIKVDELENYFYDLKDASVKCKFRRCQHIKEPGCEVKKLIEEGKIAKSRYD 277 Query: 328 NYHRILESMAQVK 340 +Y +I + +++ + Sbjct: 278 SYLKIRQEISENR 290 >UniRef50_D0J0X0 Ribosome small subunit-dependent GTPase A n=10 Tax=Betaproteobacteria RepID=D0J0X0_COMTE Length = 328 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 163/338 (48%), Gaps = 31/338 (9%) Query: 18 HQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGD 77 Q R ++ G+ G+V++ +G H VE+ DG+ C+ R V GD Sbjct: 3 KQGRRPGAQA--------TGDTQTGLVVASYGRHCVVETPDGERRICHPRGKKSQAVAGD 54 Query: 78 RVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELS 137 V W P G +G +E + ER +V R D K AAN+DQ++I+ A P S Sbjct: 55 HVQWLAPPP---GQGDEGTIEKIVERRNVFYRQDDI-RTKTFAANLDQLLILIAAEPVFS 110 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI--------GYRVLM 189 + R L+A E I+PII LNK+DL +E ++++ YR + Y VL Sbjct: 111 EVQLARALIAAEAAHIKPIIALNKMDL--EEPFLRAWQRLEPYRTMRDAANAAPHYMVLP 168 Query: 190 VS--SHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQ 247 +S + + L G+ ++ G SGVGKS+L+N LL ++ TN+IS G+ Sbjct: 169 LSLEDADDEDRDAIIGLLEGKTTLVLGPSGVGKSTLINLLLP-DAKVATNEISQALNTGK 227 Query: 248 HTTTAARLYHFPHG--GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHD 305 HTTT+ LY +IDSPG +EFGL+H+ Q+ + CK+ +C H Sbjct: 228 HTTTSTTLYWVDEARTTAIIDSPGFQEFGLYHIAATQLAACMPDIGALADQCKFYNCTHL 287 Query: 306 TDPGCAIREAVEE----GKIAETRFENYHRILESMAQV 339 +PGCA+ VE I+ R+ Y + + ++Q Sbjct: 288 HEPGCAVMAQVEAQDSPHSISANRYRIYGELFDELSQE 325 >UniRef50_C5BLQ5 Putative GTPase EngC protein 2 n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLQ5_TERTT Length = 392 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 93/317 (29%), Positives = 145/317 (45%), Gaps = 24/317 (7%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR------SLVTGDRVVW 81 D + E G VIS A V D + ++ GD V+ Sbjct: 53 AQQLADPVVLESRLGRVISVQRSVAMVACGD-QRRNVELTLNLQQAEPVDRPTVGDWVIL 111 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLN 139 +E V ER S+ R +PIAANID + IVS+ E + Sbjct: 112 DETHT---------RIEQVLERKSLFKRIGSGNTTQFQPIAANIDVVFIVSSCNDEFKES 162 Query: 140 IIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLK 199 ++RYL C+ P+I+L K+DLLDD G ++ + G V +V++ L Sbjct: 163 RLERYLALCDEAGAIPVIILTKVDLLDDAG-GYIERARSV--QSGVAVEVVNALDPSTLD 219 Query: 200 PLEEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 ++ + G G SGVGKS+LLNAL + T I ++ G+HTTT LY Sbjct: 220 GVKGWIEGNSTIALVGSSGVGKSTLLNALA-EETLAATGSIREDDKKGRHTTTHRELYFL 278 Query: 259 PHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE 318 GG +ID PG+RE + ++ + + F + + C++ DCKH +PGCA+ A+EE Sbjct: 279 ASGGLIIDVPGMRELRVADVD-DALGHVFEDIEELSEKCRFIDCKHMNEPGCAVLAAIEE 337 Query: 319 GKIAETRFENYHRILES 335 G+++ R +Y +++ Sbjct: 338 GRLSGRRLASYQKLVRE 354 >UniRef50_A4ASQ1 Ribosome-associated GTPase n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ASQ1_9FLAO Length = 354 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 22/330 (6%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRP 83 + N G + G VIS V++ + + +R GD V Sbjct: 17 EANNLGSFEIGRVISEHKDRYTVKTGKNE-FDAELLGNLRYTATDRSDLPAVGDWVAI-- 73 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLNII 141 +E K ++ A+ R S++ R + IAANID +IV ++ + ++N I Sbjct: 74 ----SEYDEDKALIHALLPRKSIIERKAVGKLGQTQIIAANIDFGLIVQSVNRDFNINRI 129 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 +RYL C +IEP+IVL+K+DL++++ + + Q++ R + +S+ TQ G+ L Sbjct: 130 ERYLTICNASKIEPLIVLSKVDLIEEQKLKELLIQINE-RIEDVPLFAISNQTQIGITEL 188 Query: 202 EEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 + L GR G SGVGKS+L+N L G + T +IS++ G+H T+ L + Sbjct: 189 KSELKTGRTYCLLGSSGVGKSTLINTLTGKDL-METGEISESIDRGKHVTSHRELIVLEN 247 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 G +ID+PG+RE G+ + + F + CK+ DC H + GCA+ +A+E G Sbjct: 248 G-ILIDNPGIREVGITN-SSSGLEITFESILNLAQNCKFSDCTHINEKGCAVIDAIENGD 305 Query: 321 IAETRFENYHRILESMAQVKTRKNFSDTDD 350 + + NY ++ + + ++ D Sbjct: 306 LDADAYANYIKMEKEKSHFESDAQERKKKD 335 >UniRef50_Q729X9 GTP-binding protein, putative n=4 Tax=Desulfovibrio RepID=Q729X9_DESVH Length = 348 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 87/288 (30%), Positives = 145/288 (50%), Gaps = 25/288 (8%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVS 130 GD V G G++ V R + L R + IAAN+D IV Sbjct: 64 PCVGDWVALDIH-----GGLSAGVIHHVLPRRTWLRRRTAGQTGRHQMIAANVDVAFIVQ 118 Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMV 190 + + N ++RYL ++P++VL K D++ E + + + + V+ Sbjct: 119 SCHYDFCPNRLERYLFMVREGGVKPVVVLTKTDMVSAEALEGLVAVVHSVAD--VDVIAT 176 Query: 191 SSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 S+++ DG+ ++ A+ G+ G SGVGK++L N LLG + T +S +G G+H Sbjct: 177 SAYSGDGVDAVKAAVEAGKTCCLLGSSGVGKTTLTNLLLGREL-FATQHVS-ATGEGRHQ 234 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVE--FHDYLGLCKYRDCKHDTD 307 TT ++ GG ++D+PG+REFG+ E E+ GFV G C++ DC+H+ + Sbjct: 235 TTRRQMVILSGGGLLVDTPGMREFGVIGPESEE---GFVGEAVERLAGSCRFHDCRHERE 291 Query: 308 PGCAIREAVEEGKIAETRFENYHRILESMA-------QVKTR-KNFSD 347 PGCA+R A+E G +++ R++NY R+ + A + + R KNFS Sbjct: 292 PGCAVRAALEAGTLSQERYDNYIRLRKEAAFGALSLHERRHRDKNFSK 339 >UniRef50_A6CYS2 Ribosome-associated GTPase n=2 Tax=Vibrionaceae RepID=A6CYS2_9VIBR Length = 344 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 26/320 (8%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAE 89 VI R V++ DG + ++ + GD + R Sbjct: 5 NLQTYRVIERNANRYKVQTPDG-IRTAQLKGSFIHLIQDKQGYPCVGDWIEARDDNNII- 62 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAIL--PELSLNIIDRYL 145 ++E++ +R S+++R + + IAAN+D IV + S +++R L Sbjct: 63 ------LIESIKKRKSLVSRKASGEATVQQTIAANVDYTFIVMGLDGGRNYSDRLLERLL 116 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 P+++LNK DL +D + + + +G ++ S+ G+ + L Sbjct: 117 TVAWNSGATPVVILNKSDLNEDAELVQMQAETI---ALGIDIITCSALDGTGINDVMTYL 173 Query: 206 T-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 G++ +F G SGVGKS+L N LL Q + TN + G+HTT+++ L+ +GG + Sbjct: 174 ANGKVGVFIGPSGVGKSTLTNTLLQYQAQ-KTNGLRLQDMRGRHTTSSSYLFELENGGFI 232 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 +D+ G++E W I F E CKYR+C+H+ +PGCA+++ +E G I Sbjct: 233 VDTSGIKEVQAW-ANGNDIDSVFEEISLVAQDCKYRNCQHEGEPGCAVQKELEAGNITPE 291 Query: 325 RFENYHRILESMAQVKTRKN 344 R+++Y + + A ++ RK+ Sbjct: 292 RYDSYLNLKQEHAFLERRKS 311 >UniRef50_A4SW79 Ribosome small subunit-dependent GTPase A n=2 Tax=Polynucleobacter necessarius RepID=A4SW79_POLSQ Length = 337 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 101/310 (32%), Positives = 156/310 (50%), Gaps = 30/310 (9%) Query: 43 IVISRFGMHADV----------ESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVN 92 ++ + +G H ES G + + + GDR++ Sbjct: 7 LLTASYGRHYLAQRLIADAAGNESPSGPLIQVSTPAKQHIGAVGDRMLLEMTSVD----- 61 Query: 93 VKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 + + + R ++L R D + K IA+N+DQI+IV A P S +++ R +VA ET Q Sbjct: 62 -QARIIEIEPRENLLYRSDAFKS-KLIASNVDQILIVLATQPAFSPDLLGRAVVAAETNQ 119 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSH-TQDGLKPLEEALTGRISI 211 I I+LNK DL + + + + Y +GY V VS+ + L+ AL G++S+ Sbjct: 120 IGLHILLNKCDL--PDNIEHARKIIAPYARMGYPVSEVSAKFDPASIDALQSALKGKVSV 177 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG---------G 262 F GQSG+GKSSLLNA + LT + S G+HTTTA R + P G Sbjct: 178 FVGQSGMGKSSLLNAWVP-NAAALTQEYSVRLDTGKHTTTACRYFELPESWGRDASGKLG 236 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIA 322 +IDSPG +EFGL H+ ++ F EF D LG C++ +C H ++P CA+R AV+ +IA Sbjct: 237 ALIDSPGFQEFGLAHMSVSELQHAFREFKDLLGKCRFHNCAHQSEPDCAVRAAVDRNEIA 296 Query: 323 ETRFENYHRI 332 R + ++ Sbjct: 297 PERLALFRQL 306 >UniRef50_Q2JW76 Ribosome small subunit-dependent GTPase A n=2 Tax=Synechococcus RepID=Q2JW76_SYNJA Length = 363 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 89/281 (31%), Positives = 141/281 (50%), Gaps = 20/281 (7%) Query: 63 RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAAN 122 R +++ +S++ GD V A +G +EA+ R + L RP AN Sbjct: 62 RAKLKKMGQSVMVGDWVEVSLPPAADSLWPERGAIEAILPRRTQLPRPAI--------AN 113 Query: 123 IDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYR 181 I Q+++V A+ PE N + R LV E + +V NK D ++ +++ + Sbjct: 114 ITQVLVVMALAEPEPEPNALSRLLVQAEASHLRVQVVFNKCDCVEAAVAESWRQRL---Q 170 Query: 182 NIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISD 241 GY L+VS+ T+ G+ L +IS+ AG SGVGKSSLLN LL ++ T +S+ Sbjct: 171 RWGYEPLLVSALTEAGIPELRRRCRDQISVVAGPSGVGKSSLLNRLLP-AVQLTTQAVSE 229 Query: 242 NSGLGQHTTTAARLYHFPHGGDVIDSPGVREF-GLWHLEPEQITQGFVEFHDYLGLCKYR 300 G+HTT L+ P GG + DSPG G+ + P+Q+ + F E + LG C++R Sbjct: 230 KLRQGRHTTRHVELFPLPEGGWIADSPGFNAGEGIPPVSPQQLIRCFPEVRERLGTCQFR 289 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKT 341 DC HD +PGC +RE + R Y ++L + + + Sbjct: 290 DCLHDREPGCGLRE------LDWERRGFYLQLLHELQEAQA 324 >UniRef50_A6WF06 GTPase EngC n=8 Tax=Actinomycetales RepID=A6WF06_KINRD Length = 357 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 89/313 (28%), Positives = 142/313 (45%), Gaps = 13/313 (4%) Query: 37 GEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS-LVTGDRVVWRPGKPAAEGVNVKG 95 G+ V+ DVE+ G + TGD V R P +G V G Sbjct: 34 GDLLPARVVRVHRGACDVETPLGPQRVGTPAGHLVPEPTTGDWVGLRLDDP--DGPRVVG 91 Query: 96 IVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 +V R +VL R +AAN+D +V+ +L ++R+L Sbjct: 92 VVA----RRTVLARASVTGRSTEHQLAANVDTVVVAVGADSRTTLGRVERFLALAWNSGA 147 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +P++ L K DLLD++G+ V ++ +G V+ VS+ G+ L L G + Sbjct: 148 QPVVALTKSDLLDEDGLEDVLARVRG-DAVGVAVVPVSATGPRGVGELRNHLRG-TVVLI 205 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SG GKS+L NALLG + + G G+HTT L P G ++D+PG+R Sbjct: 206 GSSGAGKSTLANALLGQDR-FAVGAVRSADGKGRHTTVTRELVPVPGGLVLVDTPGLRSL 264 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 G+ L E + + F + D C++ DC H +PGCA+ A++ G ++ R ++Y R+ Sbjct: 265 GVSELG-EGLERTFADVEDVAVDCRFSDCSHTAEPGCAVLAAIDAGVMSARRLDSYRRLE 323 Query: 334 ESMAQVKTRKNFS 346 A +R + Sbjct: 324 REQAWFASRTDAR 336 >UniRef50_A8LW34 Ribosome small subunit-dependent GTPase A n=3 Tax=Micromonosporaceae RepID=A8LW34_SALAI Length = 362 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 102/330 (30%), Positives = 147/330 (44%), Gaps = 16/330 (4%) Query: 21 RLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR-SLVTGDRV 79 R + + D+ D G V + G V ++ G + + GD V Sbjct: 17 RADDVRRRTDHQPGRVARVDRG-VCTVLGAAGPVRASLGGAVLAAAAQDLTYLPCVGDWV 75 Query: 80 VWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELS 137 + A + VEAV R + L R + +AAN+ +V + PE Sbjct: 76 LL------ATWPDRNVTVEAVLPRRTALIRRTAGKAASGQVLAANLTAAAVVEPVHPEPD 129 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 L I+R L P++VL K DL+ D A + + G VL VS+ DG Sbjct: 130 LGRIERLLALAHESGARPLVVLTKTDLVSDPA-ALTRQVAAV--APGVPVLPVSAERGDG 186 Query: 198 LKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 L PL + R G SG GKSSL+NAL G + T I G G+HTTT L Sbjct: 187 LDPLRPEVAPSRTLGLLGPSGAGKSSLVNALAG-AVVMPTQAIRRVDGKGRHTTTWRALV 245 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAV 316 P GG V+D+PGVR GL + + F + C+YRDC HD +P CA+REAV Sbjct: 246 AVPGGGAVVDTPGVRAVGLLD-GAVGLDRAFADIATLATGCRYRDCAHDGEPACAVREAV 304 Query: 317 EEGKIAETRFENYHRILESMAQVKTRKNFS 346 E G+++ R+E++ R+ +A R++ Sbjct: 305 ESGELSGRRWESWRRLQREVAFETRRRDAR 334 >UniRef50_Q8A8H7 Putative ribosome biogenesis GTPase rsgA 1 n=9 Tax=Bacteria RepID=RSGA1_BACTN Length = 355 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 28/325 (8%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTI-------RSLVTGDRVVWRPGKPAAEG 90 + G +I +V + DG V+ C + + TGD V+++P Sbjct: 28 DMSHGRIIVTHKTCYEVVAEDG-VYLCELTGNMIYGRVPDEYPCTGDWVIFQPFDAN--- 83 Query: 91 VNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVAC 148 KGI+ + R L R + IA+ +D+ IV ++ ++ +R++ Sbjct: 84 ---KGIIVDILPRERALYRKKNGRVADRQAIASYVDKAFIVQSLDDNFNVRRAERFIAQV 140 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TG 207 +I+P++VLNK DL D ++E + + V + S + L E++ G Sbjct: 141 MEEKIKPVLVLNKADLGCD--RQKIDEAIKHIARQ-FPVFITSIRQPQTILRLRESITKG 197 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 +F G SGVGKSSL+NAL G + T+DIS ++G G+HT+T + G +ID+ Sbjct: 198 ETVVFVGSSGVGKSSLVNALCGKSV-LNTSDISLSTGKGRHTSTRREMVLMDGSGVLIDT 256 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PGVREFGL P+ +T+ F E DY C++ DCKH +PGCA+ EAV G + +E Sbjct: 257 PGVREFGLAIDNPDSLTEMF-EISDYAESCRFSDCKHIDEPGCAVLEAVHNGTLDHKVYE 315 Query: 328 NYHRILESM------AQVKTRKNFS 346 +Y ++ K +K S Sbjct: 316 SYLKLRREAWHFSASEHEKRKKEKS 340 >UniRef50_C7RGU6 Ribosome small subunit-dependent GTPase A n=4 Tax=Anaerococcus RepID=C7RGU6_ANAPD Length = 290 Score = 279 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 28/309 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 +G +I V+ +G + R R + GD VV + + K Sbjct: 3 QGKIIKAQKELYYVDC-NGKILMAKARGNFRVKKIKPLVGDNVVI------DDLEDRKAY 55 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 + + R + + RP+ +NIDQI++ + I P L+L +D+YL CE ++ Sbjct: 56 ITEILPRKNEIKRPNI--------SNIDQILLFATIKDPILNLYNLDKYLAMCEYKDMDV 107 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +IVL+KIDL D+ V + +IY NIGY+++ + + + + + L + S +G Sbjct: 108 VIVLSKIDLCDENE---VKDFENIYENIGYKLISLDNFDNFPKEKILDILKNKTSAVSGA 164 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKS+ LN L+ E+ T IS+ S G++TT ++ + D+PG F + Sbjct: 165 SGVGKSTFLNNLI--DIEVETGSISEKSKRGKNTTRHTEIFKIGDESFLFDTPGFDSFDI 222 Query: 276 WHLEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 +E E ++ F EF D CK++DC H +P C ++ + +G I+++R++NY + E Sbjct: 223 DFIEDEKELKYLFREFRD--KRCKFKDCNHINEPACGVKSYLADGLISKSRYDNYLMLFE 280 Query: 335 SMAQVKTRK 343 + + + K Sbjct: 281 EVKKRRENK 289 >UniRef50_A6DJW3 Ribosome-associated GTPase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJW3_9BACT Length = 400 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 102/351 (29%), Positives = 182/351 (51%), Gaps = 26/351 (7%) Query: 4 NKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIV--ISRFGMHADVESADGDV 61 ++++K + + ++ ++ + + E EG+V ISR G A G++ Sbjct: 63 SRMAKQKPDALEDWTRKAMELADSMNTLEKESERELFEGVVKSISRGGGIL--RGAHGEI 120 Query: 62 ------HRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG 115 +++T + G+ V + + +VE + +R S+ +RPD Sbjct: 121 TFFLKSELAMLQKTG--VSVGEEVYYSMKD------DGSALVERIAKRKSIFSRPDPLRP 172 Query: 116 --VKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAF 172 + IA NID + +VS++ P + IDR L+ E ++ LNK+DL + E Sbjct: 173 KIERVIAVNIDYVCMVSSLDSPVFNPFFIDRVLIGARQSGAEFVLCLNKMDL-EVEDKEQ 231 Query: 173 VNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQK 232 V +++D YR +G + VS+H + G+ L+ L G+ S+F G SGVGKSSLLNA+ Sbjct: 232 VLKELDYYRQLGVSIFEVSAHDEQGIDDLKLFLKGKKSVFVGTSGVGKSSLLNAISP-DL 290 Query: 233 EILTNDISDNS-GLGQHTTTAARLYHFPHGG-DVIDSPGVREFGLWHLEPEQITQGFVEF 290 +I T + + + G G+HTT + ++ +ID+PG REF L + +++ F EF Sbjct: 291 DIKTQETREKAGGRGRHTTVMSTFHYLEDDDLYIIDTPGFREFNLMEISKDELKFYFPEF 350 Query: 291 HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKT 341 D L CK+ +C+H + GC + +A++ G I E R+++Y RIL+++ + +T Sbjct: 351 -DGLESCKFSNCQHIHEVGCVVLDALDNGDIYERRYDSYLRILDTLPKSET 400 >UniRef50_A6GEV4 Ribosome-associated GTPase n=2 Tax=Deltaproteobacteria RepID=A6GEV4_9DELT Length = 340 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 174/350 (49%), Gaps = 32/350 (9%) Query: 3 KNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVH 62 + K + + R RR ++ + +D++ GEP G++++ G+ DV G+ Sbjct: 5 QRKRQQTRAGRSGRGSSRRARSLQLAAGAEDDVAGEP--GVLVAHHGVAVDVRLRGGERR 62 Query: 63 RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAAN 122 +RR+ V GDRV V G ER S L R D V +AAN Sbjct: 63 PVKVRRSSGH-VVGDRVE------------VFGERLRRLERDSELRRRDAMGRVHVVAAN 109 Query: 123 IDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRN 182 +D + IV A P IDR LV+ + I+P++++NK DL D G + Sbjct: 110 LDVLGIVVAPKPGPPAGFIDRALVSAASSGIQPLLIVNKADL-DGAGALVAAVRRTFVEG 168 Query: 183 IG---YRVLMVSSHTQDGLKPLEEALTG--RISIFAGQSGVGKSSLLNALLGLQKEILTN 237 G +L VS+ T +GL+ + L F G SGVGKSSL+N LL + E+ Sbjct: 169 PGGVDLPLLEVSAKTGEGLEAILRFLAQGPHRGAFVGTSGVGKSSLVNTLLP-EVELEVG 227 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG-- 295 I++ SGLG+HTTT A L+ GG++ID+PG R+FGL + ++++ F F D LG Sbjct: 228 AINELSGLGRHTTTTATLHPLSGGGELIDTPGFRDFGLVDIGVRELSRFFPGFADILGTD 287 Query: 296 --------LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 C++ DC+H +PGCAI EAV EG +A R+E Y +L + Sbjct: 288 ASGHDSKHACRFNDCRHLVEPGCAILEAVAEGALARARWERYRDLLTELE 337 >UniRef50_B2SLQ8 Putative ribosome biogenesis GTPase rsgA n=19 Tax=Xanthomonadaceae RepID=RSGA_XANOP Length = 363 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 20/276 (7%) Query: 71 RSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVI 128 GD V+ + + A+ R + + R + + IAANID + I Sbjct: 77 ERAAVGDWVLMEGKR-----------IVALLPRRTSIKRGAAGAHYHQQVIAANIDTVFI 125 Query: 129 VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL 188 V + + + I+RYL+ +P++VL K D + A ++ + Sbjct: 126 VCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQTEHAEDALA--VLEELEAQNIPLR 183 Query: 189 MVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQ 247 +++ + L L GR ++ G SG GKS+L N LLG +K + TN + +N G+ Sbjct: 184 ALNAKDPASVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTEK-MKTNGVRENDSRGR 242 Query: 248 HTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQG-FVEFHDYLGLCKYRDCKHDT 306 HTTT L P G +ID+PG+RE E + +G F + C++ DC H Sbjct: 243 HTTTHRALIPLPSGACLIDTPGMRELKPTG--EEDLAEGGFSDVEALAAQCRFNDCAHIA 300 Query: 307 DPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 +PGCA+R A+E + R NY ++ +A + Sbjct: 301 EPGCAVRAAIEADLLDPERVANYMKLRVEVASAAEK 336 >UniRef50_C6BWU3 GTPase EngC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWU3_DESAD Length = 345 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 23/314 (7%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTI-----RSLVTGDRVVWRPGKPA 87 D E V H V + ++ I GD ++ Sbjct: 22 DTDDTEMIPARVTMTHKGHLVVSTGHSELLL-KIAGKGIGSLNEQPTVGDWLLMDRETMV 80 Query: 88 AEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYL 145 V ERTS+L R P ++PIAANID + IVS+ E +LN I+RY+ Sbjct: 81 P---------VKVLERTSLLQRMAPGQEVKLQPIAANIDTLFIVSSCNTEFNLNRIERYI 131 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 + ++VL K DL +E + + ++ ++ ++ ++ ++ L++ Sbjct: 132 CLALEAGVNFVLVLTKEDL-TEEAQEYRKQAEHLFESM--PIVTINGKDPQSVQSLQKWF 188 Query: 206 T-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 G G SGVGK++LLN + G +KE T I G+HTTT L+ P G + Sbjct: 189 KPGETVALLGSSGVGKTTLLNTINGTEKE-KTGAIRHGDDKGRHTTTTRSLHVMPSGALL 247 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID PG+RE L I + F E + +C++ DC H+ +PGC +REA+E I Sbjct: 248 IDVPGIRELQLHDCHA-GIDRAFSEIVEAEEMCRFSDCSHEREPGCGVREALESKIITRR 306 Query: 325 RFENYHRILESMAQ 338 R +NY ++ E + Sbjct: 307 RLDNYLKLKEEAEK 320 >UniRef50_B8DLQ8 GTPase EngC n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLQ8_DESVM Length = 371 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 97/338 (28%), Positives = 149/338 (44%), Gaps = 46/338 (13%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNVK 94 V + + G+V + + GD V + A Sbjct: 27 RVCAVDRGAYRIRGEGGEV-PAELAGRLAYHTDNPADLPCVGDWVTAQWHSDATA----- 80 Query: 95 GIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 GI+ V R +VL R DG V+ IAANID IV + + + ++RYLV Sbjct: 81 GIIHRVFPRRTVLRRKTAGDGCGVQMIAANIDTAFIVQSCHYDFNPGRLERYLVMLADGG 140 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISI 211 +EP++VL K DL+ + ++ + + RV+ +SS T GL L +AL GR Sbjct: 141 VEPVVVLTKTDLVTPDDLSRLLAVVAAVTPA--RVIALSSVTGAGLDVLRQALAPGRTHC 198 Query: 212 FAGQSGVGKSSLLNALLGLQ--------------------KEILTNDISDNSGLGQHTTT 251 G SGVGK++LLN L Q + T +S +G G HTTT Sbjct: 199 LLGSSGVGKTTLLNQLTSGQAGAGVLDGQALATRADQATRADRATRAVS-ATGEGTHTTT 257 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 +L G V+D+PG+RE G + + GF + G C+Y DC+H+ + GCA Sbjct: 258 RRQLTMLDGGALVVDTPGMREVGTV-AAADGVDAGFADIALLAGECRYADCRHEHEAGCA 316 Query: 312 IREAVEEGKIAETRFENYHRI-----LESMAQVKTRKN 344 +R AV+ G++A + NY ++ M+Q+ R+ Sbjct: 317 VRAAVDSGELAAAHYHNYLKLRKEAAFNEMSQLDRRRK 354 >UniRef50_C5C2S6 GTPase EngC n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2S6_BEUC1 Length = 352 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 94/323 (29%), Positives = 146/323 (45%), Gaps = 18/323 (5%) Query: 27 EKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKP 86 + D D+G + V DG + GD ++ P Sbjct: 20 SRVDRQRVRALPLDDGGAFAPGDGTTVVTDRDGTLPAAV--GEPLVPAVGDVLLAAPTPE 77 Query: 87 AAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRY 144 + V V R S L R D + IAAN+D +VI + P+ ++ ++R Sbjct: 78 LPDRVL-------VAPRRSELARDSADRTSREQVIAANVDVVVIAEHLDPDPAVGRVERL 130 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 L P++VL K DL+DD +V + + +G VL VS+ T G+ L E Sbjct: 131 LTLAWRSGATPLVVLTKADLVDDAA-DWVADVGAV--ALGVDVLAVSATTGLGMSELRER 187 Query: 205 LT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 + G + G SG GKS+L+NAL G + + T D G G+HTT+ L P G Sbjct: 188 IAPGTTLVVVGPSGAGKSTLVNALAGTEV-MATGD-RRGDGKGRHTTSHRELVPLPGGAT 245 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 +ID+PG+R GL P+ + + F + D + C++ DC HDT+PGCA+ AVE+G + E Sbjct: 246 LIDTPGLRAVGLV-ATPDAVAKTFSDVEDLVAQCRFSDCAHDTEPGCAVLAAVEDGTLDE 304 Query: 324 TRFENYHRILESMAQVKTRKNFS 346 R ++ + M + R + Sbjct: 305 RRLASWRSLQREMLRQAARSDAR 327 >UniRef50_A6GTD7 Ribosome small subunit-dependent GTPase A n=1 Tax=Limnobacter sp. MED105 RepID=A6GTD7_9BURK Length = 330 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 85/330 (25%), Positives = 158/330 (47%), Gaps = 14/330 (4%) Query: 18 HQRRLKTSKEKPDYDDNLFGEPD--EGIVISRFGMHADVESADGDVHRCNIRRTIRSLVT 75 ++ R ++ G PD +V++ +G H G + + + R + Sbjct: 7 NKVRPTYKGKQTGNHGKNAGNPDLLNALVVASYGRHFLARDDSGTIWQVYGKGKRREVAV 66 Query: 76 GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPE 135 GD ++ P +++ VE + R +++ R D K AAN+D ++++ AI P Sbjct: 67 GDEIIILPSG------DMQAWVEDIQPRKNLVYRSDALKS-KMFAANLDGVLLMLAISPP 119 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLL--DDEGMAFVNEQMDIYRNIGYRVLMVSSH 193 S ++ R L AC+ ++ I+ NK+D+L D E + V +++ +S Sbjct: 120 YSPELLGRTLTACKHAEVPLTILFNKVDILEGDSETLEAVEQELFEITLGEVPTHYISVT 179 Query: 194 TQDGLKP--LEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTT 251 + L+ L G+ ++ GQSG+GKS+L+N L+ TN+IS G+HTTT Sbjct: 180 ERPSETETLLQPLLEGKRTLILGQSGMGKSTLINLLIPGAL-AATNEISMALNAGKHTTT 238 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 +++ G ++IDSPG + FGL HL + F + D C++ +C+H +P CA Sbjct: 239 HTQMHFGAQGLELIDSPGFQAFGLHHLSESDLLNAFTDIRDEGNKCRFANCQHKREPDCA 298 Query: 312 IREAVEEGKIAETRFENYHRILESMAQVKT 341 ++ +E+G ++ R+E Y + + + Sbjct: 299 VKNGLEDGTLSPARYELYQMLKAELEEASQ 328 >UniRef50_A9EN60 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EN60_SORC5 Length = 370 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 145/318 (45%), Gaps = 22/318 (6%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGV 91 V+ V++ADG + + GD V RPG A Sbjct: 42 QPARVVLASASRHHVQTADGPRL-AVVSGRLAHEAADRAALPTVGDWVGLRPGDGA---- 96 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACE 149 + R++ L R V + +AANID++ IV+++ + +L ++RY+ A Sbjct: 97 -GPSYIVHTFARSTCLRRKAAGPTVEAQVLAANIDKVFIVTSLNADFNLRRLERYIDAVL 155 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGR 208 P++VLNK D+ D +++ D+ + +VS+ + GL L + G Sbjct: 156 DSGARPVLVLNKADVCPDPAR-YIDAARDVAPAA--PIALVSALSGAGLDALRAEIGAGE 212 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 G SGVGKS+L N LLG + ++ I + G+HTT L+ P GG +ID+P Sbjct: 213 TIALVGSSGVGKSALSNRLLGAEVQLE-GAIRASDERGRHTTAHRELFLIPGGGLLIDTP 271 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G+RE G+W GF + + C++RDC HD +PGCA+ A+++G + R Sbjct: 272 GIRELGVWSAGGSA-PAGFDDVEAHAAACRFRDCAHDGEPGCAVLRAIKDGDLDPERLGA 330 Query: 329 YHRILESMAQVKTRKNFS 346 Y ++ + +++ Sbjct: 331 YLKLGAERRHLAGQQDVR 348 >UniRef50_C0VZX3 Possible GTP-binding protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZX3_9ACTO Length = 351 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 114/367 (31%), Positives = 168/367 (45%), Gaps = 36/367 (9%) Query: 1 MSKNKLSKGQQR-RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADG 59 MSK + R RV R +K +PDY D EG + S V D Sbjct: 1 MSKRDIGTDDPRVRVRPGKGTR-PRTKIRPDYSDC-----PEGFIFSVDRGRYHVRFEDR 54 Query: 60 DVHRCNIRRTIR-SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR----PDFYD 114 + R R S+V GD V + + + +V+ER+SVL R D Sbjct: 55 LLMAVKSRELGRGSIVVGDVVKLNGDLSGRK--DTLARIVSVNERSSVLRRSGEDADTKG 112 Query: 115 GVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFV 173 K + AN D +VIV+A+ P + IDR LVA + PI+ L K DL D + Sbjct: 113 REKTMVANADNVVIVTAMTNPPVRPGFIDRCLVAAYDAHMRPIVCLTKADLGDPD----- 167 Query: 174 NEQMDIYRNIGYRVLMVSSHTQD----GLKPLEEALTGRISIFAGQSGVGKSSLLNALLG 229 + + ++G ++ S+ G + L E ++G+ S+ G SGVGKS+L+NA+L Sbjct: 168 -NVISLCESLGVTTVISSNQEGHEHQFGYEKLIELISGQTSVLIGHSGVGKSTLINAILP 226 Query: 230 LQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVE 289 + E LT D++ +G G+HT+T P GG +ID+PG+R FGL H+EP+ + F E Sbjct: 227 -EAERLTGDVNQVTGRGRHTSTNMIALELPEGGWIIDTPGIRGFGLAHVEPDTVIDAFPE 285 Query: 290 FHDYLGLCKYRDCKHDTDP-GCAIREAVEEGK------IAETRFENYHRILESM--AQVK 340 D + C R C H C + V+ G R + R+LES+ AQ K Sbjct: 286 LEDAIEDCP-RSCNHLESAVDCGLDAWVKAGADEADAVYRANRLASIRRLLESLKTAQEK 344 Query: 341 TRKNFSD 347 + D Sbjct: 345 PWETVRD 351 >UniRef50_Q03RY0 Predicted GTPase n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RY0_LACBA Length = 354 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 85/326 (26%), Positives = 137/326 (42%), Gaps = 23/326 (7%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWR 82 + + G ++ + V +A G V V GD V + Sbjct: 17 HQFADISDRQVGHIVRQERQQYQVITAVG-VVSAQTSGRFNHHVLDTSDFPVIGDFVGIQ 75 Query: 83 PGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLNI 140 I+ R S+ R V+ +AAN+D +I ++ + + + Sbjct: 76 LTPTKDA-----AIIHQELPRNSLFVRQAAGTTHQVQSVAANVDVALICMSLNHDFNPHR 130 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKP 200 ++RYL C P++VL K DL D ++ +GL P Sbjct: 131 LERYLTVCWDSGATPVVVLTKSDLCSDTEAKLAVIAPMTLGVTVLTTTTTTA---NGLAP 187 Query: 201 LEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L+ L G+ G S VGKS L+N LLG K I+T D N G HTTT+ LY Sbjct: 188 LQTFLQAGQTFALLGSSDVGKSILINRLLG--KTIITTDGLRNDDKGHHTTTSRELYQLS 245 Query: 260 HGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEG 319 G +ID+PG+R GLW + + Q F + D + C++R+C H T+PGCA++ A+ G Sbjct: 246 SGALMIDTPGMRALGLWGADT-GLAQNFSDVADLIRHCRFRNCHHQTEPGCAVKAALATG 304 Query: 320 KIAETRFENYHRILESMAQVKTRKNF 345 ++ R ++Y ++ A + + Sbjct: 305 QLTTERGQSYQKLQAENAYSHDTQAY 330 >UniRef50_Q8YUA3 Putative ribosome biogenesis GTPase rsgA 1 n=19 Tax=Cyanobacteria RepID=RSGA1_ANASP Length = 370 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 137/277 (49%), Gaps = 27/277 (9%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 R +++ + ++ GDRVV + +G + V R + L RP Sbjct: 58 TRRTRLKKIGQQVMVGDRVVVE----EPDWAGGRGAIADVLSRQTQLDRP--------PI 105 Query: 121 ANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN DQI++V A+ P L + R+LV ET ++ ++ LNK DL+ E +++++ Sbjct: 106 ANADQILLVFAVADPPLEPYQLSRFLVKAETTGLDVVLCLNKSDLVSPEIQQQISDRLL- 164 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDI 239 GY+ L +S Q + + + L+ +I++ AG SGVGKSSL+NAL+ + ++ Sbjct: 165 --AWGYQPLFISVENQINIDQIAKYLSNKITVVAGPSGVGKSSLINALIP-NINLRVGEV 221 Query: 240 SDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD--YLGLC 297 S G+HTT L+ P+GG + D+PG + + PE++ F E + + C Sbjct: 222 SGKLARGRHTTRHVELFELPNGGLLADTPGFNQPDV-DCSPEELVHYFPEARERLAIASC 280 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 ++ DC H +P CA+R E R+E+Y L Sbjct: 281 RFNDCSHRDEPDCAVRGDWE-------RYEHYLEFLA 310 >UniRef50_B3PN77 GTPase YjeQ/EngC n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PN77_MYCA5 Length = 279 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 37/306 (12%) Query: 39 PDEGIVISRFGMHADVES-ADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNV 93 D+G ++ DV+S +D ++R +R + GD V + + Sbjct: 1 MDKGKIVKSIAGFYDVKSFSDSKIYRVRGSGKLRLLDMKPIVGDFVEFEHNE-------- 52 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 ++ + R + RP AN+DQ ++V ++ P+ S ++D++L+ E Sbjct: 53 --LIHRIMGRKNFFIRPKI--------ANVDQAIVVMSLVEPDFSSQLVDKFLIIIENKN 102 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 + PIIVL K DL ++D Y++ GY V ++ T++G L E + S F Sbjct: 103 VTPIIVLTKKDLTS-------KTKIDFYKDQGYTVYEINYETEEGFDDLREIFRNKTSFF 155 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 GQ+GVGK++L+N L T IS G+HTT L F +GG++ID+PG Sbjct: 156 VGQTGVGKTTLINYLAKT--SFETQAISKALNRGKHTTREVSLIDF-NGGEIIDTPGFSS 212 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKH--DTDPGCAIREAVEEGKIAETRFENYH 330 + L +++ F F + +CKYR C+H + + C +++ V +G I + R++NY Sbjct: 213 IE-FDLTIDEMPVAFKTFREAAKMCKYRSCRHYQEAESECNVKQLVLKGIIKQERYDNYR 271 Query: 331 RILESM 336 LE + Sbjct: 272 SFLERL 277 >UniRef50_D2S5Q8 Ribosome small subunit-dependent GTPase A n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5Q8_9ACTO Length = 340 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 101/321 (31%), Positives = 148/321 (46%), Gaps = 22/321 (6%) Query: 29 PDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--LVTGDRVVWRPGKP 86 PD D + G V V +ADG+V + GD V R Sbjct: 11 PDRDAGIPAGCVPGRVARVDRGRLTVLTADGEVRAHPAAALLEDTGPAVGDWVALRGELA 70 Query: 87 AAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRY 144 A V R + TR + +AAN+D +++V A+ L ++RY Sbjct: 71 VA-----------VLPRRTAFTRVVAGRTSAEQVVAANVDLVLVVDALTTAPRLRRVERY 119 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 L P++VL K DL DD A + Q D +G VL VSS T +GL + Sbjct: 120 LAVAWGSGATPVVVLTKADLCDDVPAALLAMQED---AVGVDVLPVSSVTGEGLDAVRAL 176 Query: 205 L-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 L GR + G SGVGKSSL NAL G + T I D G G+HTTTA L+ P GG Sbjct: 177 LGPGRTAAMVGPSGVGKSSLANALAGTEV-AATRGIRDADGRGRHTTTARELHLLPGGGL 235 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 ++D+PG+RE GL ++ + + + C++RDC H T+PGCA+ A++EG++ Sbjct: 236 LVDTPGMRELGL--VDDAGVGTAYADVTGLAAACRFRDCAHRTEPGCAVAAAIDEGRLDP 293 Query: 324 TRFENYHRILESMAQVKTRKN 344 R+ + ++ + R + Sbjct: 294 ARYTAWRKLQAEAHRQALRSD 314 >UniRef50_Q30WI2 GTPase n=2 Tax=Deltaproteobacteria RepID=Q30WI2_DESDG Length = 354 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVS 130 GD ++ + ER S L R ++ +AANID + IV+ Sbjct: 68 PTVGDWLLLDRRTSQP---------VRLLERKSFLHRRAAGREAKIQALAANIDTLFIVT 118 Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMV 190 + + + + I+RYL + P++V+ K DL+ D F+ I +++ V ++ Sbjct: 119 SCNDDFNPSRIERYLTLAMGSGVTPVLVITKADLVADAD-EFIGRAKAIRQDL--DVCVL 175 Query: 191 SSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 ++ LE G+ AG SGVGKS+L+N L G + T I ++ G+HT Sbjct: 176 NALDAGSAAVLENWCGKGQTLALAGSSGVGKSTLVNTLQGEHIQ-STGAIREHDARGRHT 234 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG 309 TT L+ P G +ID+PG+RE L + + + F + C++ DC HD + G Sbjct: 235 TTGRSLHMLPSGAVLIDTPGIRELQLADVG-QGLASAFDDIEQLAAGCRFNDCTHDHESG 293 Query: 310 CAIREAVEEGKIAETRFENYHRILESMAQ 338 CA++ AV G++ R ENY +I Sbjct: 294 CAVQAAVLSGELELRRLENYRKIRAEQQH 322 >UniRef50_B2UNU0 GTPase EngC n=3 Tax=Verrucomicrobiales RepID=B2UNU0_AKKM8 Length = 373 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 19/319 (5%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNV 93 G +I ++ G+ + + GD V PG+ E Sbjct: 29 GRLIRETKINFTALLDGGEDVDAVVSGKLWHDAATDAELPAVGDWVAIDPGEAGDE---- 84 Query: 94 KGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 ++ + R + +R P + + N+D + +V+ + + ++RY Sbjct: 85 -AVIRTILPRQTCFSRKAPGKSSAEQVLGTNVDIVAVVTEPGTDFNPRRMERYFTLIRRS 143 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRIS 210 P+I+LNK DL E + + + + ++ +S+ G+ + L G+ Sbjct: 144 GASPLILLNKTDLFSREEVENAMQILREL-SPECAIISISALHNRGITEFRKCLSKGKTI 202 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGKS+L+N LLG + + T ++++ +G G+HTT A L HGG +ID+PG+ Sbjct: 203 CIVGSSGVGKSTLVNTLLG-DEWLWTGEVNEVTGKGRHTTVARELVLLKHGGLLIDNPGI 261 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE +W + + + F + + CK+ DC H D GCAIR+AV+EGK+ + R+ N+ Sbjct: 262 REIQMWT-DEHTLRESFADLTELAHECKFADCSHGKDSGCAIRKAVDEGKLDKERYLNFL 320 Query: 331 RILESMAQVKTRKNFSDTD 349 + +A++ R+ + Sbjct: 321 NLENEIARLAKRQKKRQMN 339 >UniRef50_C2HH17 GTP-binding protein n=2 Tax=Finegoldia magna RepID=C2HH17_PEPMA Length = 292 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 26/307 (8%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 G++ V S +V+ + R + V GD+V N G Sbjct: 5 TGVITKIQRELFYV-SIGNEVYPSKAKGNFRNKKITPVVGDKVDINV-------ENGLGF 56 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEP 155 + +H R+ +L RP+ +NID+ ++S+I P ++L ++D+YL+ E I+ Sbjct: 57 ILKIHPRSVLLHRPE--------VSNIDKCFVLSSIKSPNINLMLLDKYLLMIEKNNIDC 108 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +IV NK DL+ ++ F DIYRNIGY+V+ S+ + + L IS G Sbjct: 109 VIVFNKSDLVSEDEKKFYA---DIYRNIGYKVIFNSNESSITNEELLNEFKNHISCVIGP 165 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SG GKSS L L ++ ++ ISD + G+ TT + V+D+PG F L Sbjct: 166 SGAGKSSTLKKLFP-NEDFVSGKISDKTQRGKQTTRHIEIKMVDDNTYVLDTPGFSSFDL 224 Query: 276 WHLE-PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L+ +I FVEF CK+ +C H +P C I+ VE G+I+++R++NY I+E Sbjct: 225 SFLDDKSEIKNNFVEFRKNSSKCKFNNCDHINEPKCEIKRLVETGEISQSRYDNYLNIVE 284 Query: 335 SMAQVKT 341 +++ Sbjct: 285 EYEKIRR 291 >UniRef50_C8NZ87 Ribosome small subunit-dependent GTPase A n=4 Tax=Erysipelotrichaceae RepID=C8NZ87_ERYRH Length = 284 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 93/307 (30%), Positives = 147/307 (47%), Gaps = 27/307 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR---SLVTGDRVVWRPGKPAAEGVNVKG 95 E ++ V G+ +R + GD V E ++ K Sbjct: 1 MREAVITRIVSNRYSVYFE-GEFIIATAMGKLRLGDKPIVGDHV-------HIEELDGKW 52 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 +++ V R + L RP + AN+DQ +IV + P+ S +++R + I Sbjct: 53 VIQQVLPRRNQLIRP--------LVANVDQALIVMSAKEPDFSFTLVNRLIFLVSLQNIN 104 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 PII+++K DL D A +D Y GY V+M S LE + +IS+ AG Sbjct: 105 PIIIVSKGDLADS---ALKQSILDEYEQYGYTVIM--SGKDISTDALESVMENKISVLAG 159 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 QSGVGKSS+LN + E+ T +IS G G+HTT ++Y GG + D+PG Sbjct: 160 QSGVGKSSILNRI-SDDLELNTQEISKALGRGRHTTRHNQIYPL-CGGWIADTPGFSSLD 217 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 ++P +++Q +F ++G CKYRDC H +PGC I+E VE G+I++ R ++Y L Sbjct: 218 FSSVDPVELSQSIPDFVPFIGNCKYRDCMHIQEPGCIIKEKVESGEISKQRHQDYLDCLT 277 Query: 335 SMAQVKT 341 + + Sbjct: 278 LIKEESR 284 >UniRef50_D1AJL1 Ribosome small subunit-dependent GTPase A n=2 Tax=Fusobacteriaceae RepID=D1AJL1_SEBTE Length = 293 Score = 273 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 86/311 (27%), Positives = 147/311 (47%), Gaps = 32/311 (10%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR------SLVTGDRVVWRPGKPAAEGVNVK 94 +G VI + V ++D +++ C +R ++ + + GD V + + A Sbjct: 2 KGRVIRKIKGFYYV-NSDNNIYECKLRGALKIKNDKLNCIVGDIVEFDEKEQA------- 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQI 153 + V ER + L RP + +NID I AI P+ + L+ I Sbjct: 54 --ICKVFERENYLDRP--------LISNIDYAGITFAIKSPDFDYTNFQKVLLNVYDRNI 103 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMD-IYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 P ++ K+DL+ D + + ++ + V V + L L E + G+I+ F Sbjct: 104 TPFVIFTKVDLISDTELKEFTDNFHMVFSTLELDVFPVIATDDTALSDLREFIAGKITAF 163 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 +G SGVGKS+L+N LL + T DIS+ + G+HTTT +R++ + ++D+PG Sbjct: 164 SGPSGVGKSTLINNLLNEDI-LRTGDISEKTDRGKHTTTESRIFELDNSTLIVDTPGFSS 222 Query: 273 FGLWHL-EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 L E +++ F +F DY LCK+RDC H +P C ++ A+E KI + R+E Y Sbjct: 223 LDFPKLKEKTALSRLFPDFQDYSVLCKFRDCTHINEPECGVKSALENAKIPKLRYEFYLY 282 Query: 332 ----ILESMAQ 338 I + + Sbjct: 283 SYNNIFREVKK 293 >UniRef50_Q2BLA6 GTPase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLA6_9GAMM Length = 356 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 18/269 (6%) Query: 72 SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIV 129 GD ++ ER + + R ++ IAANID + I Sbjct: 69 HPTVGDWLMLDSDFQPV----------KRLERKTRIQRRAAGHQSYIQMIAANIDTLFIT 118 Query: 130 SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLM 189 S+ + +LN I+RYL I ++VL K+DL +D + ++ + V + Sbjct: 119 SSCNDDFNLNRIERYLAIAAESHIHCVLVLTKMDLCNDPSVYLDQLKIS---HPSLSVEL 175 Query: 190 VSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQH 248 V++ + + L + + +G+ G SGVGKS+L+N L G + T I ++ G+H Sbjct: 176 VNAIDAESIAGLRQWIASGQTVALVGSSGVGKSTLINGLKGSDDQ-ETASIREHDSKGRH 234 Query: 249 TTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP 308 TTT+ L+ P GG ++D+PG+RE + I F + ++ C++ DC H +P Sbjct: 235 TTTSRSLHLLPQGGLLLDTPGMRELQIVD-SAAGINSAFDDINELARGCRFTDCTHHNEP 293 Query: 309 GCAIREAVEEGKIAETRFENYHRILESMA 337 GC + +AVE G++ R NY ++L A Sbjct: 294 GCTVVDAVEAGRLEPRRLFNYQKLLVEQA 322 >UniRef50_D0LVG1 Ribosome small subunit-dependent GTPase A n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LVG1_HALO1 Length = 341 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 10/288 (3%) Query: 58 DGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG-- 115 G + R R R GD V +P + G V + +R + R Sbjct: 58 SGGMLRAAKRERQRRPAVGDWVAVQPAVG-----DGMGTVVHLFDRRTRFLRQAAGRRPV 112 Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNE 175 V+ +AANID IV+A + + ++RYL ++VLNK D DE Sbjct: 113 VQVVAANIDAAFIVTAFGHDFNPRRLERYLTCVGESGARAVLVLNKRDQAADEDEIAARI 172 Query: 176 QMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEI 234 G VL S+ GL L + + + G SGVGKSSL+N L+ + + Sbjct: 173 AEVRAVAAGAPVLCTSATEGRGLDELRAEIASHETAALVGSSGVGKSSLVNWLMAAEVQ- 231 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T + + G G+HTTT L P GG +ID+PG+RE L+ + + + F + Sbjct: 232 RTAPVRERDGRGRHTTTHRELMLLPGGGLLIDTPGMRELQLFSA-ADALREAFADIASLS 290 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 C++RDC+H +PGC +R+A+ G++A R+E + ++ + R Sbjct: 291 ESCRFRDCRHRDEPGCEVRQALHRGRLARERYEGFCKLQGELEAAGAR 338 >UniRef50_Q8R685 Putative ribosome biogenesis GTPase rsgA n=15 Tax=Fusobacterium RepID=RSGA_FUSNN Length = 285 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 86/298 (28%), Positives = 151/298 (50%), Gaps = 29/298 (9%) Query: 50 MHADVESADGDVHRCNIRRTIRS------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHER 103 VES +G V C +R ++ V GDRV + + +R Sbjct: 7 GFYYVES-NGQVFECKLRGILKKTNNKYNCVVGDRVEISEDNS----------IVEIFKR 55 Query: 104 TSVLTRPDFYDGVKPIAANIDQIVI-VSAILPELSLNIIDRYLVACETLQIEPIIVLNKI 162 ++L RP I AN+D + I +A P + I+ L+ +I+PI+++NKI Sbjct: 56 DNLLIRP--------IVANVDYLAIQFAAKHPNIDFERINLLLLTAFYYKIKPIVIVNKI 107 Query: 163 DLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSS 222 D L +E + + E++ I + ++S + GL+ +E L +I++ G SGVGKSS Sbjct: 108 DYLTEEELVELKEKLSFLERISVPMFLISCYQNIGLEEVENFLKDKITVIGGPSGVGKSS 167 Query: 223 LLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE-PE 281 +N L ++ + T +IS+ G+HTT + + GG +ID+PG + ++E E Sbjct: 168 FIN-FLQSERILKTGEISERLQRGKHTTRDSNMIKMKAGGYIIDTPGFSSIEVPNIENRE 226 Query: 282 QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 ++ F EF + + CK+ +C H +PGC +++ VEE KI++ R++ Y + LE + + Sbjct: 227 ELISLFPEFLN-IDSCKFLNCSHIHEPGCNVKKQVEENKISKERYDFYKKTLEILLER 283 >UniRef50_B9NLX8 Ribosome small subunit-dependent GTPase A n=2 Tax=Rhodobacteraceae RepID=B9NLX8_9RHOB Length = 359 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 28/325 (8%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPA 87 + + G P + + S DG+ + GD V+ Sbjct: 32 AAQHAADPTGLPF--RITAVHRDRLIGLSPDGEAPLLTPGEPTGTYAVGDWVL------- 82 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYL 145 + G V + +R S+L R G + IAAN+D + I S+ + +L ++RYL Sbjct: 83 ---TDETGRVRHLLDRRSLLQRRAAGTGATAQLIAANVDVLFIASSCNADFNLPRLERYL 139 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 P+IVL K D+ DD ++V + + + VL +++ ++ Sbjct: 140 ALAHQAGCYPVIVLTKSDMCDDTE-SYVQQAGALAPFL--TVLAINALDPADIEQALAWC 196 Query: 206 -TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 G+ G SGVGK++L N + G +++ T+ I ++ G+HTTTA L+ +GG + Sbjct: 197 PKGQTGALVGSSGVGKTTLANGMTG--QDLATSGIREDDARGRHTTTARALHRMRNGGWL 254 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID+PG+R L + + + F + + C++ DC+HDT+P CA++ A+ G + Sbjct: 255 IDTPGMRALRLLDA-RDGVDEVFSDISELSLSCRFSDCQHDTEPDCAVQAAISNGVLDPA 313 Query: 325 RFENYHRILES-------MAQVKTR 342 R E + ++ +AQ + R Sbjct: 314 RLERWRKLRREDQRNSASVAQARAR 338 >UniRef50_C8ZYN3 Ribosome-associated GTPase n=4 Tax=Enterococcus RepID=C8ZYN3_ENTGA Length = 317 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 21/319 (6%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEG 90 ++GIVI + A V + G+ + R + GDRV+ Sbjct: 2 ENQGIVIFQAKDLAKVVLSSGEERYARVSGKFRQQATALKDYPIVGDRVM------GHCY 55 Query: 91 VNVKGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAILPELSLNIIDRYLVAC 148 + +++ V R S L R + IAAN+ + + + E +L ++R++ Sbjct: 56 DQNQFLIDTVLPRKSFLQRKVAGNRPDEPGIAANVTTVFLTTNANEEFNLARLERFVTIV 115 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 P+IVL KID +D + Q+ + VL + + + E LT Sbjct: 116 WNSGANPVIVLTKIDQMDTTETEAIINQLKL--TFALPVLATTIYKDE-RTQFEPFLTPE 172 Query: 209 I-SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 F G SGVGKSSLLN LLG +++ T I + G G+HTTT+ +L+ P+G VID+ Sbjct: 173 SMVAFIGSSGVGKSSLLNQLLGDERQT-TKAIREEDGRGRHTTTSRQLFRLPNGAMVIDT 231 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+RE L + + + + C++++C+H+++P CA++EA+ G++++ F Sbjct: 232 PGMREISLETVAASSLDRHYQMIELLAEKCRFKNCRHESEPNCAVKEALASGELSQDLFN 291 Query: 328 NYHRILESMAQVKTRKNFS 346 Y ++ + + ++ +++ Sbjct: 292 RYRKMEKELVYLRHKEHLQ 310 >UniRef50_A5IY02 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Mycoplasma RepID=RSGA_MYCAP Length = 281 Score = 270 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 145/308 (47%), Gaps = 35/308 (11%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 +G + S ++ + + H R + GD V + K Sbjct: 2 KGKIYSINSGIYSIKDENNNFHNLPALGVFRHKNIVPLVGDYVEFEKEK----------Y 51 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 + ++ER + RP ANID I+IV +I PE ++D+Y+ E+ IEP Sbjct: 52 ITKIYERQNEFIRPK--------VANIDHIIIVMSIHEPEFQSFLVDKYMAFIESANIEP 103 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++ K DL ++ + Y ++GY+V +S T + +K + + T + ++ GQ Sbjct: 104 VLFNTKADLGT-------SKYKNEYESLGYKVYEISYKTDEWVKNIAKLFTNKTNVLMGQ 156 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGK++L+N + G IS + G+HTT ++ + G++ID+PG + Sbjct: 157 SGVGKTTLVNKITGS--NFAVQAISKFANRGKHTTRIVQIVNVFDNGELIDTPGFSSLDI 214 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG--CAIREAVEEGKIAETRFENYHRIL 333 +L +Q+ + +F + CK++ C H +P C I++AV++ I + R+ NY ++L Sbjct: 215 -NLTKQQLAYSYKQFKELGKFCKFKTCFHQNEPENFCNIKQAVKDNIIPQFRYNNYLKLL 273 Query: 334 ESMAQVKT 341 + + + Sbjct: 274 QEVENEQK 281 >UniRef50_C7QYQ8 GTPase EngC n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYQ8_JONDD Length = 341 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 88/281 (31%), Positives = 128/281 (45%), Gaps = 23/281 (8%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSA 131 GD V +V R + L+R D + +AAN+D + +V Sbjct: 55 AVGDWVATDGSTWV-----------SVLPRRTELSRHSADRTSEEQVLAANVDAVFVVEP 103 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS 191 P+ I+R L PI++L K DL+D + + V G V+ VS Sbjct: 104 AYPQPHHRRIERMLTLAWASGARPIVLLTKSDLVDHDVVTEVESVTR-----GVEVISVS 158 Query: 192 SHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTT 250 S T L L ++ G I G SG GKSSL+NAL G + T ++ G G+HTT Sbjct: 159 SETGHHLDVLAGLISPGDTFILLGPSGAGKSSLVNALAGAPV-LATGEVR-GDGRGRHTT 216 Query: 251 TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGC 310 T L G +ID+PG+R G+ E + F + C++ DC H T+PGC Sbjct: 217 TRRELITIEGLGSLIDTPGLRSVGMTAQEA-GLEATFDDIASLAAQCRFSDCAHATEPGC 275 Query: 311 AIREAVEEGKIAETRFENYHRILESMAQVKTRKN-FSDTDD 350 A++ AV+E + R +NYHRI +A RKN +S D+ Sbjct: 276 AVQRAVDELALDPRRLDNYHRIEREIAHQARRKNAYSRVDE 316 >UniRef50_D1J8S7 Probable GTPase engC n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8S7_MYCHP Length = 283 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 38/307 (12%) Query: 41 EGIVISRFGMHADVES-ADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKG 95 EG ++ D++S D ++R +R + GD V+++ + Sbjct: 3 EGKIVKSVAGFYDIKSFEDKQIYRVRGGGKLRLLDIVPIVGDNVLFKKDE---------- 52 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 + + R + RP AN+DQ ++V ++ PE S ++D++L+ E+ ++ Sbjct: 53 FIYQILGRKNFFIRPKI--------ANVDQAIVVMSLVEPEFSSLLVDKFLIIIESKNVK 104 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 PIIVL K DL D +AF Y++ GY V ++ T G + L E + S F G Sbjct: 105 PIIVLTKKDLTSDSKIAF-------YKDQGYEVFEINYETGQGFEGLGEIFKHKTSFFVG 157 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 Q+GVGK++L+N L T IS G+HTT L F +GG++ID+PG Sbjct: 158 QTGVGKTTLINYLAKT--NFETQAISKALNRGKHTTREVSLIDF-NGGEIIDTPGFSSIE 214 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYR-DCKHDTDP--GCAIREAVEEGKIAETRFENYHR 331 + L E++ F F + CK+R CKH + C +++ V +GKI + R++NY Sbjct: 215 -FDLTIEELPIAFKSFREAASKCKFRTSCKHYLESVEDCEVKKLVLQGKIKQERYDNYIS 273 Query: 332 ILESMAQ 338 L+ + Sbjct: 274 FLKRLTN 280 >UniRef50_C4G9D9 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9D9_9FIRM Length = 355 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 94/369 (25%), Positives = 153/369 (41%), Gaps = 84/369 (22%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 +G +I V ++ C R R V GD V P V+ +G Sbjct: 2 QGKIIKGIAGFYYVYVRGRGIYECKARGAFRKKKIKPVAGDAVEIEITDP----VDAEGN 57 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 + ++ ER S+L RP AN+DQ +++ A P + N++DR+LV E +I Sbjct: 58 IVSIAERRSLLIRPA--------VANVDQALVIFAARKPMPNFNLLDRFLVMMEQAEIPT 109 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 I+ NK+DL+D + IY Y + +S+ GL + L+ R + AG Sbjct: 110 TILFNKVDLVD---REEIERIRRIYAASAYPIHFMSAKENLGLDEIRRQLSNRTTTVAGP 166 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF----------------- 258 SGVGKSSL+N L + + T IS G G+HTT + L Sbjct: 167 SGVGKSSLINRLQSATR-MQTAGISVKLGRGRHTTRHSELIPLEGEPSAVEGCLNTGGKG 225 Query: 259 ---PHGG-------------DVIDSPGVREFGLWHLEPEQI------TQGF--------- 287 P GG + D V E + E+I +GF Sbjct: 226 EAEPSGGTGDPAGRFRVNRHFIEDEARVLEEDSPEMICEEIRGRYQGARGFIVDTPGFSS 285 Query: 288 ---------------VEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 EF Y+ C+++ C H +P CA+R+A++ GKI+++R+++Y ++ Sbjct: 286 LYVPDFEKEDLAFYFPEFLPYMNACRFQPCTHTHEPQCAVRKALDRGKISQSRYDSYLQM 345 Query: 333 LESMAQVKT 341 E +++ + Sbjct: 346 YEELSERRR 354 >UniRef50_Q98JM4 Putative ribosome biogenesis GTPase rsgA n=14 Tax=Alphaproteobacteria RepID=RSGA_RHILO Length = 346 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 17/266 (6%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP-DFYDGVKPIAANIDQIVIVSAI 132 GD V+ P +V+ R +VL R G + AAN+D + IV++ Sbjct: 70 AVGDWVLVEPHSH---------LVQRRLTRKTVLERRVQGGRGPQLAAANVDTLFIVTSC 120 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS 192 + ++ ++RYL P+I+L K D +D A+ + + R + V+ ++ Sbjct: 121 NADFNIARLERYLALANEAGTTPVILLTKADTAEDAE-AYRKQAAALQRELA--VVTLNP 177 Query: 193 HTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKE--ILTNDISDNSGLGQHT 249 L G+ G SGVGKS+L+N L G ++ T I ++ G+HT Sbjct: 178 RIPGAASALAAWCGAGQTVALIGSSGVGKSTLVNTLAGSAQQSPQQTGAIREHDAKGRHT 237 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG 309 TTA L+ GG VID+PG+R + + I F E + LCK+RDC H +PG Sbjct: 238 TTARSLHAIAGGGWVIDTPGMRTLQVSDVGY-GIDTLFAEITELAPLCKFRDCTHVHEPG 296 Query: 310 CAIREAVEEGKIAETRFENYHRILES 335 CA++ A++ G + R + ++ + Sbjct: 297 CAVQAALKAGTLDPERLARWRKLSDE 322 >UniRef50_A6W235 GTPase EngC n=2 Tax=cellular organisms RepID=A6W235_MARMS Length = 382 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 31/284 (10%) Query: 75 TGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILP 134 GD V+ AE V+ + V E + L R + IAAN+D + IV++ Sbjct: 74 VGDWVI-------AEPVHEHFRITEVLEAKNQLERLSNRKR-QLIAANLDYLFIVTSANS 125 Query: 135 ELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGY-RVLMVSSH 193 + +L ++RYL IEP+IVLNKIDL D V++ +D R + ++ +S Sbjct: 126 DFNLKRLERYLAMAYESNIEPVIVLNKIDLTD-----KVDDYLDQIRGLKVHNLVSISML 180 Query: 194 TQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEI---------------LTN 237 + L L L G G SGVGKSSL+NAL E+ T Sbjct: 181 EPNSLLSLNHYLKAGTTIAMVGSSGVGKSSLINALFNHVVELATSVLNSVEVTDNMQATG 240 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 I ++ G+HTTT+ +L G ID+PG+RE L + + E I Q F + C Sbjct: 241 GIREDDDKGKHTTTSRQLLINQQGVLFIDTPGIRELQLLNAQ-EGIEQTFNDIVHLARQC 299 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKT 341 K+ +C H T+PGC I +A+E G++ + ++NY ++L+ A Sbjct: 300 KFTNCAHQTEPGCQILQALENGELPLSHWDNYQKLLKEDAFNAR 343 >UniRef50_B0JW21 Putative ribosome biogenesis GTPase rsgA n=8 Tax=Cyanobacteria RepID=RSGA_MICAN Length = 358 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 143/304 (47%), Gaps = 34/304 (11%) Query: 42 GIVISRFGMHADVESAD---GDVHRCNIR----RTIRSLVTGDRVVWRPGKPAAEGVNVK 94 G V++ V G+ C R + +S++ GDRV + + Sbjct: 11 GTVVAVQANFYQVRLDSAVMGENLLCTRRARLQKIGQSVMVGDRVRVEEANFGDQ----Q 66 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G + V R++ + RP ANI+QI++V A+ P L +I R+LV E+ + Sbjct: 67 GAIAEVLPRSTEIDRPA--------VANIEQILLVFALAEPVLDPWLISRFLVKAESTGL 118 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 E + +NKIDL + E + +++ GYR VS G + L L +I++ A Sbjct: 119 EIAVCVNKIDLGEPEQIEVWGDRLA---GWGYRPFFVSVEKNRGFEALLAQLNHKITLLA 175 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKSSL+N L+ + D+S G+HTT +L+ P+ G + DSPG + Sbjct: 176 GPSGVGKSSLINCLIP-EINQRVGDVSGKLQKGRHTTRHVQLFALPNRGLLADSPGFNQP 234 Query: 274 GLWHLEPEQITQGFVEFHD--YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 + L PE++T F E LG C++ DC H +P C +R E R+++Y Sbjct: 235 DINCL-PEELTFYFPEVRARLALGNCQFNDCTHRREPNCVVRGDWE-------RYQHYLE 286 Query: 332 ILES 335 LE Sbjct: 287 FLEE 290 >UniRef50_C0R0A9 Ribosome-associated GTPase n=2 Tax=Brachyspira RepID=C0R0A9_BRAHW Length = 367 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 85/309 (27%), Positives = 137/309 (44%), Gaps = 23/309 (7%) Query: 45 ISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVNVKGI 96 + R +D I+ IR V GD V+ + Sbjct: 38 VIRINKRYYTLFSDEGEFLARIKGKIRYNSEIQSELPVVGDWVLMKKSDNN-------AF 90 Query: 97 VEAVHERTSVLTRPD--FYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 ++ + R ++L R + ++ I +NID I+ I E+ ++ I RYL T I+ Sbjct: 91 IDTILTRKNILYRKANVKKNDIQAIVSNIDYAFIIVGIDNEMPMSAIARYLSVVHTSGIK 150 Query: 155 PIIVLNKIDLLDDEG-MAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS-IF 212 PII ++KIDL +D + + Y N SS T + + S +F Sbjct: 151 PIIAISKIDLYEDAEYKELLAAIKETYPNE--TAFAYSSKTGKNADTFLKYIKKDTSSVF 208 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SG GKS+++N LL +K + T ++ + G HTTT L GG VID+PG+R Sbjct: 209 IGASGAGKSTIINYLLKDEK-MKTQEVREYDFKGMHTTTHRELLVLDSGGVVIDTPGLRN 267 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 GLW + I + F + +Y CK++DC H +P C I E +E +I R++ Y + Sbjct: 268 LGLWEDDK-GIKKTFEDLEEYAKKCKFKDCTHQHEPDCYILELLENDEIPYERYDAYVTL 326 Query: 333 LESMAQVKT 341 L +++ Sbjct: 327 LNENRELQK 335 >UniRef50_C6XMF8 GTPase EngC n=16 Tax=Alphaproteobacteria RepID=C6XMF8_HIRBI Length = 358 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 32/317 (10%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIV 97 E +I V D D + GD +++ P P + Sbjct: 45 ETPPVRIIEIHRNSLHVLGEDIDTLI----PSGPDATVGDWLLYNPKLPNS--------- 91 Query: 98 EAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 V ER SV R ++ IAAN+D IVS+ + ++ ++RY+ ++ P Sbjct: 92 SKVLERKSVFQRRAAGTAWDLQLIAANVDTAFIVSSCNQDFNIARLERYIALALEAEVTP 151 Query: 156 IIVLNKIDLLDDEG--MAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR-ISIF 212 +I+L KIDL +D + D+ V+ + + ++ + L + R +F Sbjct: 152 VIILTKIDLCEDATPYIEQAQSISDL-----VTVVTLDARGEEPQQKLAQWCRPRQTLVF 206 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SGVGKS+L NAL G + +I T + ++ G+HTTT +L+ P G ++D+PG+RE Sbjct: 207 LGSSGVGKSTLTNALAG-KSDIATQAVREDDDKGRHTTTTRQLHMSPQGFTILDTPGMRE 265 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 L ++ F ++ + C++RDCKH+T+PGCAI+ A+E +I R + ++ Sbjct: 266 IQLTDAAA-GVSDLFSDYQEIAHQCRFRDCKHETEPGCAIQAALETEEIDSVRVARWKKL 324 Query: 333 LES-------MAQVKTR 342 + +AQ K++ Sbjct: 325 VAEEQFNSSTLAQRKSK 341 >UniRef50_D2AX52 Ribosome-associated GTPase n=3 Tax=Actinomycetales RepID=D2AX52_STRRD Length = 360 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 80/279 (28%), Positives = 129/279 (46%), Gaps = 16/279 (5%) Query: 70 IRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIV 127 + + TGD R G+ + A+ R S + R + +AAN+D +V Sbjct: 69 LLAPCTGDWAALRWGREPE--------LVALLPRRSAIVRSSASRTSHAQVLAANVDTVV 120 Query: 128 IVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRV 187 + ++ L ++R L P+IVL K A V+ + G + Sbjct: 121 LAVSLTTPLDAARLERLLALAWDSGARPLIVLTKA--DLAADAAAVHAETSTL-APGVDI 177 Query: 188 LMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQ 247 L+ S+ T + L L+G ++ G SG GKS L NALLG + + T ++ G G+ Sbjct: 178 LITSAATGQNIDVLTALLSG-TTVLLGSSGAGKSRLGNALLGDEL-LATGEVRAQDGKGR 235 Query: 248 HTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD 307 HTT L P GG +ID+PG+R L+ + + Q F E C++ DC HDT+ Sbjct: 236 HTTVRRELVPLPGGGVLIDTPGLRGISLYDA-ADGLEQVFAEIERLAQDCRFGDCSHDTE 294 Query: 308 PGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 PGCA++ A++ G++ E R NY ++ A +R + Sbjct: 295 PGCAVQAAIQAGELTERRLGNYRKLQRENAWAASRTDAR 333 >UniRef50_A0L4L3 GTPase EngC n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4L3_MAGSM Length = 351 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 86/325 (26%), Positives = 139/325 (42%), Gaps = 29/325 (8%) Query: 28 KPDYDDNLFGEPDEG----IVISRFGMHADVESADGDVHRCNIRRTIR------SLVTGD 77 +P + L E VI+R G + DG + R + GD Sbjct: 14 RPFFQQQLSMEEQHATHVVRVIARHGDTLTLLGNDGQS-SLKLPGKWRLQPPEEQPIVGD 72 Query: 78 RVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAILPE 135 +V ER S L+R G + +AANID + +VS+ + Sbjct: 73 WLVMDQQNQPLRW----------LERLSHLSRKAAGSGQQTQHMAANIDTLFVVSSCNRD 122 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 195 + + ++RYL ++P+++L K DL+D+ F + ++R G + + + Sbjct: 123 FNPSRLERYLALAFAGNVQPVVLLTKADLVDEPE-PFCRQVESLHR--GVVAIALDARHP 179 Query: 196 DGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAAR 254 D L + G F G SGVGKS+L+NALL QK + T + G+HTTTA Sbjct: 180 DLHHQLGPWIGPGESVAFLGSSGVGKSTLINALL-DQKSMATQAARADDDRGRHTTTARA 238 Query: 255 LYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIRE 314 ++H G ++D+PG+RE L + + F + C+YRDC H+ GCA+ Sbjct: 239 MFHMKSGAWLLDTPGMRELRLGE-SNQGLQTLFSDIEALAQACQYRDCDHERTSGCAVLA 297 Query: 315 AVEEGKIAETRFENYHRILESMAQV 339 AV + R NY ++ + Sbjct: 298 AVASDTLDARRVRNYLKLQREQTYL 322 >UniRef50_D2MQI0 Ribosome small subunit-dependent GTPase A n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI0_9FIRM Length = 289 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 84/304 (27%), Positives = 148/304 (48%), Gaps = 29/304 (9%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIR---SLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 IV +G+ + + + +R S V GD V + +++ Sbjct: 8 IVSKDYGVFLE---DTKEKVMARVAGKVRLQFSPVVGDMVEVSYQTD-------RYVIDR 57 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIV 158 + R + L RP AN+DQ IV ++ P S +++DR + + I+PI+V Sbjct: 58 ILPRRNSLVRPAI--------ANVDQAFIVMSVVDPNFSTSLVDRLSILVKAAGIKPILV 109 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 + K DL + V +++ Y ++L++ + ++ +L G+I++ GQSG Sbjct: 110 ITKTDLKYPDD---VETEIEAYER--GKMLVIRTEKGFINPAIQHSLEGKITVLTGQSGA 164 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKS+LLN L + T +IS G G+HTT + L+ GG V D+PG HL Sbjct: 165 GKSTLLNTL-DPSFHLETQEISKALGRGKHTTRHSELHEI-AGGLVADTPGFSSLSFSHL 222 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 E + + +F YL C++ DC H+ +P C I++AV +G IA++R+++Y ++L + + Sbjct: 223 ELKDMADCIPDFEPYLHQCRFNDCLHENEPDCTIKKAVLKGDIAKSRYQSYLQVLALIRE 282 Query: 339 VKTR 342 R Sbjct: 283 ENRR 286 >UniRef50_B9ZJR5 Ribosome small subunit-dependent GTPase A n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJR5_9GAMM Length = 281 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 145/288 (50%), Gaps = 19/288 (6%) Query: 57 ADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV 116 D + R + R + L GDRV ++ R + L R D + Sbjct: 8 EDAEPRRIRLHRRQKDLACGDRVEMDAAGEQ---------IQRRLPRDNTLVRQDGFGRR 58 Query: 117 KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 K IAANID + IV A P + +IDR+LVA L P I++NK D G A ++ Sbjct: 59 KVIAANIDTVWIVIAPSPMPARYLIDRFLVAVYNLPARPRILVNKQD----AGPAAPSDW 114 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL-----GLQ 231 + Y ++ L VS+ + GL L EA G +I GQSGVGKSSL+ ALL G Sbjct: 115 LAPYAHLDLDPLHVSARSGYGLDALAEAARGHTNILIGQSGVGKSSLIAALLERHGSGDI 174 Query: 232 KEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFH 291 K T D+ SG G+HTT A+ Y GG IDSPGVR+F + + +GF + Sbjct: 175 KLPETGDL-AASGEGRHTTVTAQWYSLTGGGAWIDSPGVRDFTPELESIDALVRGFPDIE 233 Query: 292 DYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 C++R+C+H T+PGCA+RE V++G + R E + +L ++ + Sbjct: 234 ALGEGCRFRNCRHQTEPGCAVREGVDQGTLPAARLEAWTALLGTLEKR 281 >UniRef50_D1BG37 Predicted GTPase n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG37_SANKS Length = 344 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 99/331 (29%), Positives = 150/331 (45%), Gaps = 28/331 (8%) Query: 22 LKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVW 81 + + E + G G V+ V + DG V ++ L GD V+ Sbjct: 13 PRRTDEAATHPAAGPGVRP-GRVVRVERDLVRVATEDGLVAVPSV-----GLAVGDWVLT 66 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLN 139 A +V +R + L R D + +AAN+D +V+V + P ++ Sbjct: 67 DGASWA-----------SVLDRRTALRRKDSGQTSDEQLLAANVDVVVVVEPMDPRPNVR 115 Query: 140 IIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLK 199 ++R P++VL K DL +A V + G VL VS+ T DGL Sbjct: 116 RVERMATLAWASGATPLVVLTKSDLALGGEVADVEAVV-----PGVEVLEVSAETGDGLD 170 Query: 200 PLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 + LT R + G SG GKS+L+NAL G + + T D+ G G+HTTT L Sbjct: 171 VVRSHLTASRTFVLLGPSGAGKSTLVNALAGTEV-LATGDVR-GDGRGKHTTTHRELVPV 228 Query: 259 PHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE 318 P G ++D+PG+R GL + E + Q F E C++ DC+H T+PGCA+ EA+E+ Sbjct: 229 PGLGCLVDTPGIRGVGLV-ADEEGLEQAFPEVVALAAGCRFVDCEHRTEPGCAVLEAIED 287 Query: 319 GKIAETRFENYHRILESMAQVKTRKNFSDTD 349 G + E R +Y +L +A RK D Sbjct: 288 GALPEVRLASYRHLLREIAHQTARKASQDRS 318 >UniRef50_B8HA01 GTPase EngC n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HA01_ARTCA Length = 340 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 93/323 (28%), Positives = 149/323 (46%), Gaps = 25/323 (7%) Query: 29 PDYDDNLFGEPDE--GIVISRFGMHADVESADGD---VHRCNIRRTIRS-LVTGDRVVWR 82 PD +++ + + V+ G HA+V SA G T+ + V GD V Sbjct: 14 PDDEESFLEQTEAQIARVVIVHGGHAEVMSASGTENVTETVLFSSTLDTTPVAGDWVAV- 72 Query: 83 PGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD-GVKPIAANIDQIVIVSAILPELSLNII 141 ++G + V R + + RPD + +AANID I++V A P SLN I Sbjct: 73 ----------LQGTIVEVAPRRTSMARPDPGGNRTQVLAANIDLILVVVAADPIPSLNAI 122 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 +R V P++VL K D D + V E + + G ++ S GL L Sbjct: 123 ERMQVMAWDSGATPVLVLTKADQCSD--LDEVLEHVAPVSS-GLETIVTSITDGRGLSLL 179 Query: 202 EEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 + + + G SG GK+SLLNAL G T + G G+HTTT RL+ P G Sbjct: 180 HDRVENLTTTMLGASGAGKTSLLNALHGTDA--ATAPVR-RDGQGRHTTTTRRLFPMPWG 236 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI 321 G ++D PG+R L E I+ F + + C++ DC H+ GCA+ AV +G++ Sbjct: 237 GVMLDIPGIRSLAL-QAGQEGISDTFADISELSYHCRFSDCLHERTAGCAVAAAVADGRL 295 Query: 322 AETRFENYHRILESMAQVKTRKN 344 + R +++ + ++ + R++ Sbjct: 296 SARRLDSWLAVQRELSFQERRRD 318 >UniRef50_A1AQR2 Ribosome small subunit-dependent GTPase A n=4 Tax=Deltaproteobacteria RepID=A1AQR2_PELPD Length = 330 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 89/319 (27%), Positives = 157/319 (49%), Gaps = 23/319 (7%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEG 90 + + G +++ G+ +V ++R V GD V Sbjct: 28 HSEIPSSPAGNGRIVAHHGISVEVLFQGEQRRMVRVKRNSGH-VVGDEV----------- 75 Query: 91 VNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNI-IDRYLVACE 149 +V G + R + L R D GV +AAN+D + IV A LS IDR +V Sbjct: 76 -SVNGELLTRLPRATELRRRDARGGVHLVAANLDALGIVMAP---LSPGRFIDRAIVTSR 131 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GR 208 T ++ P +V+NK DL + +A ++ + +S+ T +GL PL E L GR Sbjct: 132 TARLTPFLVINKCDLGEAHQLAA---RLRETYAASLPLFPLSATTGEGLLPLREYLATGR 188 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 +F G +GVGKSSL+NAL ++ + D +G+HTTT + L+ GG+++D+P Sbjct: 189 CGVFIGSTGVGKSSLMNALCP-HIKLAVGSVGDYRSMGRHTTTVSTLHSLDGGGELVDTP 247 Query: 269 GVREFGLWHLEPEQITQGFVEFHDY-LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 G R+FGL + P+ + F F + C++ +C+H ++PGC++ ++++G+I R+ Sbjct: 248 GFRDFGLVDISPQDLAAHFPGFEEAGSESCRFSNCRHRSEPGCSVLRSLQQGRITRERYA 307 Query: 328 NYHRILESMAQVKTRKNFS 346 ++ +L+ + + +K Sbjct: 308 SFLELLDEVEAEEEKKRVR 326 >UniRef50_A4XCG5 GTPase EngC n=1 Tax=Salinispora tropica CNB-440 RepID=A4XCG5_SALTO Length = 350 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 18/304 (5%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVH 101 G V+ G + S +G +R + +L GD VV G V + Sbjct: 40 GRVVRHDGSAVLI-STEGGTRHFPVRSSAPALAVGDWVVVD-----------DGRVLDLL 87 Query: 102 ERTSVLTRPDFY-DGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN 160 R S+L R D G + IAAN+D + IV + + + R+ P+++L+ Sbjct: 88 PRASLLRRRDPSTGGGQLIAANVDVVGIVCGLDRPVVHGRLQRFTSLAWDAGASPLVILS 147 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220 K DL++ E + ++ G ++ V++ T G+ L R + G+SG GK Sbjct: 148 KADLVNSTANI---ENSLLQQHPGVDIVSVAATTATGVFDLLGRCAKRTLVLVGESGAGK 204 Query: 221 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP 280 S+LLNAL G + T + + G+HTTTA +L+ +ID+PG+RE G+ H + Sbjct: 205 STLLNALAGRELG-ATGKVRRSDAKGRHTTTARQLFALEGDCCLIDTPGMREVGV-HADV 262 Query: 281 EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 + GF + + C++ DC H +PGC + AV +G+++E R ++++ A + Sbjct: 263 ATVDAGFDDIAELAVGCRFSDCGHANEPGCEVLAAVADGRLSEQRVRAWNQLCREAAWAE 322 Query: 341 TRKN 344 R + Sbjct: 323 LRAD 326 >UniRef50_B5JHE4 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHE4_9BACT Length = 374 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 24/330 (7%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADG-------DVHRCNIRRTIRSLVTGDRVVWRP 83 +D G VI V + + + R + GD + Sbjct: 18 FDAVNDGTLVPARVIRENRGEYIVNTGERVGVARLPGIERLGKLDSAAYPTVGDWLALEE 77 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAILPELSLNII 141 + +V + R S+ R + I AN D + +V+ + + + I Sbjct: 78 IAGGEDF-----LVRSFLPRASLFERKVVGESTRHQSIVANFDSLFLVTGLDEDFKTSRI 132 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG--YRVLMVSSHTQDGLK 199 RYL + E +IVLNK DL DD + E ++ + V VS+H + L+ Sbjct: 133 QRYLSLAWNSRRELVIVLNKADLRDD-----LPEVLEAVEKVAGEVPVHAVSAHDRSSLE 187 Query: 200 PLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 L L GR G SGVGKSSL+NA LG + + T G G+HTTT L Sbjct: 188 CLFGYLGKGRTVALLGSSGVGKSSLVNAFLGEDR-LPTQQNRAADGRGRHTTTWRELQMI 246 Query: 259 PHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE 318 P GG +ID PG+RE L E + + + F + + + CK+R+C+HD +PGCAI A+E Sbjct: 247 PSGGVLIDLPGMRELQLTG-EGDGVVKAFEDVEELMLRCKFRNCRHDGEPGCAIEAAIES 305 Query: 319 GKIAETRFENYHRILESMAQVKTRKNFSDT 348 G++ +R++ Y ++ E A R+ D Sbjct: 306 GELDASRYQQYVKLNEEHAVAHARREARDK 335 >UniRef50_Q2SSL6 Ribosome small subunit-dependent GTPase A n=4 Tax=Mollicutes RepID=Q2SSL6_MYCCT Length = 300 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 84/322 (26%), Positives = 160/322 (49%), Gaps = 43/322 (13%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS---LVTGDRVVWRPGKPAAEGVNVKGIV 97 +GI++ + + V + +++ + ++ GD V + + + G + Sbjct: 2 QGILVKKDSNESYV-FYENKIYKVYAKGNLKKELKPKVGDVVEFSILE------DGYGYI 54 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPI 156 + + R + L RP AN+DQ++IV+A+ P S ++++Y++ ETL+I+PI Sbjct: 55 KEIKPRKNSLDRPKI--------ANVDQVLIVTALYEPLFSSFLLNKYIMMLETLKIKPI 106 Query: 157 IVLNKIDLLDDEGM-AFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR------- 208 ++ K+DLL + V +++ Y + Y+VL++++ L + Sbjct: 107 LIFTKVDLLKESSYYQEVMHKINWYEKMHYQVLIINNKDN---------LENKNTIILKL 157 Query: 209 -------ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 IS+F GQ+G GKS+ LN L + K+I TN+IS G+HTTT+ +LY+ + Sbjct: 158 KELLKNKISVFTGQTGAGKSTTLNNFLDINKQIKTNEISKKLNRGKHTTTSIQLYNLENN 217 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI 321 + D+PG F L +++ E I + F +L CK+ DC H + C +++AV E + Sbjct: 218 IFIADTPGFSAFDLNNIDIEHILYSWETFIPFLNKCKFVDCTHTHETKCVVKKAVAEHLL 277 Query: 322 AETRFENYHRILESMAQVKTRK 343 + +Y ++ E + Q + K Sbjct: 278 PTFIYNDYVKVYEELKQNRKNK 299 >UniRef50_D2B3W4 Ribosome-associated GTPase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3W4_STRRD Length = 372 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 95/345 (27%), Positives = 154/345 (44%), Gaps = 42/345 (12%) Query: 31 YDDNLFGEPDEGIVISRFG----MHADVESADGD--------VHRCNIRRTIRSLVTGDR 78 ++D+L E G+V +R A+V SADG V R + GD Sbjct: 17 WNDSLAAELPAGLVPARVARVDRGAAEVLSADGHSQAHYSAQVRRAAAADPVALPCVGDW 76 Query: 79 VVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD----------GVKPIAANIDQIVI 128 R + +EAV R + R + +AAN+D + + Sbjct: 77 AALRRLPE------GRFELEAVLPRRTAFVRGGVARVSRGGLSGDSQGQVLAANVDVVFV 130 Query: 129 VSAILPEL------SLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRN 182 P L L I+R L P++++ K DL+ EG+ F+ ++ Sbjct: 131 ---AEPALHATDTADLGRIERLLALAWESGGLPVVLVTKSDLV-GEGLDFLMGEVAA-AA 185 Query: 183 IGYRVLMVSSHTQDGLKPLEEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISD 241 G V V S T +G++ + L GR ++ G SG GKS+L+NAL G + T + Sbjct: 186 PGVDVHPVCSVTGEGVEIVRGYLEGRRTAVVLGASGAGKSTLVNALAGGNV-METQQVRA 244 Query: 242 NSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRD 301 G G+HTT L GG +ID+PG+R GL+ + E + F + D C++ D Sbjct: 245 GDGRGRHTTVHRELIPLKDGGLIIDTPGIRRVGLYDMG-EGVDMVFSDIEDLAERCRFAD 303 Query: 302 CKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 C HD++PGCA+ A+E+G + E R E+++++ A + +R + Sbjct: 304 CGHDSEPGCAVIAAIEDGTLPERRLESWNKLQREAAWMASRSDAR 348 >UniRef50_Q04XB7 GTPase n=6 Tax=Leptospira RepID=Q04XB7_LEPBL Length = 318 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 92/313 (29%), Positives = 156/313 (49%), Gaps = 22/313 (7%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRSL--------VTGDRVVWRPGKPAAEGVNVK 94 I+ +G + ++ S + V R +R +R++ V GD+++ P V Sbjct: 13 IISRVYGAYYEIYSPERGVVRAFLRGRLRTVSAEERHPFVVGDQILAEPS------VGKD 66 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQI 153 ++ ER S LTR + + AN DQ ++ ++ PE +DR L A Sbjct: 67 WVICERLERKSFLTRKSREGDTQVLCANADQTAVLISLKSPETKDGFLDRCLAAVFASGT 126 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +P+I+ K+DL+ ++ +M IYRN+GY VL +S T G+ L++ L +++ Sbjct: 127 QPLILFTKLDLISEDE---AESRMKIYRNLGYPVLGISCTTGQGISELQKYLRRKMTFLV 183 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKS+L+N L Q + T+ IS + G+HTTT + L G +IDSPG++E+ Sbjct: 184 GNSGVGKSTLINLLTRTQIQ-KTSGISVSKDKGKHTTTNSLLLVLEDGTTLIDSPGIKEW 242 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 G+ HL+ E+I + F E C+ +C GCA+ A+E + R ++ +L Sbjct: 243 GILHLKKEEILESFPELSSQKKHCEESNC-CKLSSGCAMLFALETESMTLERRKSLESML 301 Query: 334 ESMAQVKT--RKN 344 S+ R++ Sbjct: 302 ASLGNPHRVTRRD 314 >UniRef50_B4UM25 Ribosome small subunit-dependent GTPase A n=4 Tax=Anaeromyxobacter RepID=B4UM25_ANASK Length = 350 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 142/302 (47%), Gaps = 20/302 (6%) Query: 42 GIVISRFGMHADVESADGD---VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 G V++ G V GD + ++ + V GD V+ PG+P ++ Sbjct: 28 GRVVADRGRRLRVRFEAGDRLAIVPGHLLGADPAPVAGDFVLAAPGEPP--------VIA 79 Query: 99 AVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPI 156 V ER S L+R + +AAN+D +++V + ++R L A EP Sbjct: 80 RVLERRSALSRNAAGRATVEQVLAANVDVVLVVQGLDEGAHPRRLERTLAAVHASGAEPA 139 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQ 215 +VL K DL+ D G A + VL+ S + +GL L + GR ++F G Sbjct: 140 VVLTKADLVPDLGEALAEARSAAAGA---PVLVASGLSGEGLDALAGLVGPGRTAVFVGP 196 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SG GKS+L+NALLG E + G+HTTTA RL+ P GG VID PG+RE L Sbjct: 197 SGAGKSTLVNALLGR-AEQPVGAVRARDARGRHTTTARRLFEIPGGGSVIDGPGIRELRL 255 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 W + + F + C++RDC H +PGCA+ AVE G + R E+ ++ Sbjct: 256 W--DAGGLAAAFDDVAALAAGCRFRDCSHAGEPGCAVAAAVEAGGLDAGRLESLRKLERE 313 Query: 336 MA 337 A Sbjct: 314 AA 315 >UniRef50_Q1K3F8 GTPase EngC n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3F8_DESAC Length = 317 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 101/336 (30%), Positives = 170/336 (50%), Gaps = 29/336 (8%) Query: 18 HQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGD 77 ++ ++KP +++ G++IS +G+ V +G+ H ++R V GD Sbjct: 3 QKKPTMRRQQKPQHNNG-----KPGLIISHYGVAVLVRFDNGEEHPVKVKRNSDH-VVGD 56 Query: 78 RVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELS 137 RV+ + + ER + L R D + V+ +AAN+D + IV A+ P+ Sbjct: 57 RVMVVDERVTS------------LERRNALRRRDPFGKVRTLAANLDLLGIVVAVRPQTP 104 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 I+R +VA I P++++NK DL AF ++ + + L VS+ DG Sbjct: 105 SGFIERVVVAARAADIAPLLIVNKQDL--PGTTAFEDQLQRDFPAM--PRLAVSAKQGDG 160 Query: 198 LKPLEEAL--TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARL 255 L+ L L GR S G SG GKSSLLNAL ++ T D+++ G HTT+ + L Sbjct: 161 LELLRHELAEAGR-SALVGVSGSGKSSLLNALCPG-IDLETGDLNEEDH-GCHTTSVSTL 217 Query: 256 YHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL--CKYRDCKHDTDPGCAIR 313 P+GG+++D+PG R+F + E + F L C++R+C+H +PGC I+ Sbjct: 218 LALPNGGELVDTPGFRDFSPVDVSSEALAHWFPGVMSILEEQPCRFRNCRHRQEPGCRIK 277 Query: 314 EAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTD 349 +AV +G +E R++ Y LE + Q++T +N + Sbjct: 278 QAVTQGTFSEQRYQLYLNTLEELEQLETARNEGRKN 313 >UniRef50_Q114R1 Ribosome small subunit-dependent GTPase A n=2 Tax=Oscillatoriales RepID=Q114R1_TRIEI Length = 374 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 50/320 (15%) Query: 42 GIVISRFGMHADVESADGD----------------VHRCNIRRTIRSLVTGDRVVWRPGK 85 G V++ V+ R +++ + ++ GDRV+ Sbjct: 17 GTVVAVQANFYQVKIERSYNSVKNARENLPQFLLCTRRSRLKKIGQKVMVGDRVIIE--- 73 Query: 86 PAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRY 144 + V +G + V R + L RP AN++Q+++V A+ P L + R+ Sbjct: 74 -DPDWVGGRGAIAEVLPRETELDRP--------PIANVNQVMLVFALAEPNLDPVALTRF 124 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGL------ 198 L+ E+ +E + L+K DL+ M Q+ GY +S T GL Sbjct: 125 LLKAESTGLEICLCLSKCDLVSATKMEEWRSQIS---EWGYEPFFISLKTDVGLGVVKDG 181 Query: 199 -KPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 L E L +I++ +G SGVGKSSL+N L+ + + +S G+HTT L+ Sbjct: 182 SNSLWEKLRNKITVVSGPSGVGKSSLINYLIP-DVNLRVSAVSGKLSRGRHTTRHVELFE 240 Query: 258 FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL--CKYRDCKHDTDPGCAIREA 315 P+GG + D+PG + L E ++ F E YL C++ DC H +P C +R Sbjct: 241 LPNGGLLADTPGFNQPQL-ECEAIELAHLFPEARKYLADGSCQFSDCLHRDEPNCVVRGE 299 Query: 316 VEEGKIAETRFENYHRILES 335 R+E Y LE Sbjct: 300 W-------NRYEYYLMFLEE 312 >UniRef50_Q8EUL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Mycoplasma penetrans RepID=RSGA_MYCPE Length = 287 Score = 260 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 80/302 (26%), Positives = 147/302 (48%), Gaps = 25/302 (8%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIVE 98 I+ + + IR+ ++ + GD V + + + ++E Sbjct: 5 ILFKIANSFLLYDLSTKSQFNAVIRKKLKQEDRIITVGDNVEFVKDQY-------EYVIE 57 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE-PI 156 + ER ++L RP ANID ++IV+++ P+ S ++++L E I I Sbjct: 58 KIDERKNLLIRPK--------VANIDTLIIVNSVKEPDFSSYGLNKFLAFYEARNINNVI 109 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I +K+DLL+ + +N+ + Y GY VL S + + + + + FAGQS Sbjct: 110 IYFSKMDLLNKQESKNMNQIISQYEQNGYIVLN-SLDKEKNKEKILNMIKNNVVCFAGQS 168 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKS+L+N L+ E+ T +IS G+HTTT++ + F G VID+PG L Sbjct: 169 GVGKSTLINFLIP-DLELRTQEISQALNRGKHTTTSSLMIPFNEG-FVIDTPGFGSLDL- 225 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 ++ ++ F +F + CK+++C H + C I++ V+E KI + R+ +Y ++ + Sbjct: 226 NMTQLELANSFTDFRNNSVHCKFKNCLHTNEQNCFIKKMVDENKIYKQRYLDYLKMFSEI 285 Query: 337 AQ 338 + Sbjct: 286 KK 287 >UniRef50_C7NDT0 Ribosome small subunit-dependent GTPase A n=2 Tax=Leptotrichia RepID=C7NDT0_LEPBD Length = 275 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 145/285 (50%), Gaps = 14/285 (4%) Query: 58 DGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVK 117 + +++ C +R T++ V D++ G E + ++E + +R + L RP Sbjct: 3 EENIYECKLRGTLK--VKNDKMNCIIGD-IVEFDEKEKVIEKIEKRKNFLYRP------- 52 Query: 118 PIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 + ANID I I+ AI P + L+ + I +++L+KIDL+ E + + Sbjct: 53 -LIANIDFIGILFAIKSPNFDFTNFQKMLLNANSQNIPAVLILSKIDLVSKEELEEFFNK 111 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 + +S+ T G+ L++ + + + +G SG GKS+L+N L+G ++ + T Sbjct: 112 FKQIFKETISIFPISTETNTGITELQQYINKKSVVISGPSGAGKSTLINTLIG-EEVLAT 170 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW-HLEPEQITQGFVEFHDYLG 295 ND+S + G+HTT +R + +ID+PG E +++ + F EF +++ Sbjct: 171 NDVSQKTKKGRHTTIESRFFMSAPHSYIIDTPGFSTLDFPKLEEKKELEKLFPEFLEFIP 230 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 CK+R+C H +P CAI+E VE I++ R++ Y L+++ K Sbjct: 231 NCKFRNCIHVNEPNCAIKENVENSNISQERYDFYLYSLQNIRFNK 275 >UniRef50_C7MLK1 Predicted GTPase n=4 Tax=Coriobacteriaceae RepID=C7MLK1_CRYCD Length = 355 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 89/308 (28%), Positives = 139/308 (45%), Gaps = 17/308 (5%) Query: 44 VISRFGMHADVESADGDVHRCN-----IRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 V+ V A GD+ RC ++ + V GD V A K + Sbjct: 7 VVQLDRGFPLVRLASGDLIRCKHATSLVKEATQRAVIGDWVKIETDDAAD-----KAQIV 61 Query: 99 AVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPI 156 + R VL R D + V+ +AAN D ++I + P L++ ++R LV + Sbjct: 62 EILPRQQVLLRKDPAERSMVQVLAANFDTVIIAHPL-PGLNIRRLERELVVACDTGARVV 120 Query: 157 IVLNKIDLLD-DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRISIFAG 214 + L K DL++ D+ + G V+ VS+ Q G+ + ++ G ++ G Sbjct: 121 VALTKSDLVESDQVRTDAVAAVQAVVAPGIGVIEVSTVNQIGIDAVRALVSTGTQAVLMG 180 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 +SG GKSSL+NAL + + T + G G+HTT + GG+VID PGVR G Sbjct: 181 RSGAGKSSLINALADQEVQ-ATQPVRAADGKGRHTTVNRTMVRIQGGGEVIDMPGVRGLG 239 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 LW + I F + + C++RDC+H D GC + A++ G I R Y R+ E Sbjct: 240 LWDAQA-GIDAAFPDVVEAARNCRFRDCRHQGDAGCGVGAAIKAGNITPERVAAYVRLSE 298 Query: 335 SMAQVKTR 342 +Q R Sbjct: 299 ENSQQLKR 306 >UniRef50_A8SM04 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SM04_9FIRM Length = 302 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 28/308 (9%) Query: 42 GIVISRFGMHADVESADGDVH---RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 G++ V++ G R R+ + + GD V + + Sbjct: 16 GVIFDISKDLYYVKTKTGRYMSKARGVFRKQKFTPMVGDNVKIEI------FADNTACIV 69 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPII 157 V +R + + RP N+DQ +IV ++ PE+S IIDRY++ E ++I I+ Sbjct: 70 EVFDRKNKILRP--------PVVNVDQAIIVFSLKDPEISYKIIDRYIMYYEVMKIPIIL 121 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSG 217 LNK DL+D E +IY +GY+++ +S + D K E+ +IS+ G SG Sbjct: 122 CLNKCDLIDKETEINFR---NIYDKLGYKIIF-NSISLDNRKLFEDICKDKISVITGASG 177 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 VGKS++LN L I DIS+ + G+HTT AA LY F +ID+ G L Sbjct: 178 VGKSTILN-FLNPDYNIWVGDISNKTKRGKHTTRAATLYEFFDNSFIIDTAGFTSLDLTK 236 Query: 278 -LEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 ++ E QI FVEF ++ CK+ DCKH +P C ++ +E G I+++R+++Y L Sbjct: 237 FIDSEVQIRDAFVEF-EFGSKCKFSDCKHINEPDCYVKSKLESGSISKSRYDSYIFYLNE 295 Query: 336 MAQVKTRK 343 +K R+ Sbjct: 296 --YLKNRR 301 >UniRef50_C1CZT1 Putative GTPase engC protein 2 n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZT1_DEIDV Length = 330 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 25/310 (8%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADG---DVHRCNIRRT---IRSLVTGDRVVWRPG 84 D+++ EP G + S + +A G + +R+ + V GD V+ + Sbjct: 23 QDESVQAEP--GRIASVGRASYQIWTAQGLEDALLAGTLRQEAPGQQVPVIGDWVIAQRL 80 Query: 85 KPAAEGVNVKGIVEAVHERTSVLTRPDFYD-GVKPIAANIDQIVIVSAILPELSLNIIDR 143 A ++ V R + R + IAAN+D + IV+ + L + R Sbjct: 81 AEAQALR-----IQQVLPRRTTFARAVHGGTAEQIIAANVDVVFIVTTPDQDFDLPRLGR 135 Query: 144 YLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG--YRVLMVSSHTQDGLKPL 201 Y+ A + EP+++LNK DL+ D ++ R +G +S+ GL + Sbjct: 136 YVAAVQVSGAEPVVLLNKSDLVQDAAW-----YLEQVRRLGPDLPAHQISAAQHGGLDSI 190 Query: 202 EEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 + T GR G SGVGKS+L N LLG Q+ T + + G+HTTT LY P Sbjct: 191 QPYFTPGRTVALIGSSGVGKSTLTNRLLG-QEVAATGSVRETDQQGRHTTTGRTLYRVPG 249 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 GG +ID+PG+R+ +W + + F + C++R C H T+PGCA++ AV++G+ Sbjct: 250 GGLLIDNPGLRDIAVWDADSRSVN--FEVIEELATKCRFRKCTHMTEPGCAVQRAVQKGQ 307 Query: 321 IAETRFENYH 330 + YH Sbjct: 308 LDAQVLAAYH 317 >UniRef50_Q7NDG7 Glr4268 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NDG7_GLOVI Length = 343 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 143/312 (45%), Gaps = 33/312 (10%) Query: 41 EGIVISRFGMHADVESADGD-----VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 G V+++ V DG R +++T +S++ GDRV + + +G Sbjct: 4 TGTVLAQEANFYRVRLDDGLGMVLCTRRARLKKTGQSVLVGDRVEV----AEIDSASGRG 59 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 ++ A R SVL+ KP AN +++V A+ P ++ R+LV E + Sbjct: 60 VIAATCARRSVLS--------KPPIANCTGVLVVFALSEPAYDPALLSRFLVHIEAEDLG 111 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 I+ LNKID + E + V + GY V VS+ T GL L L G + AG Sbjct: 112 VIVCLNKIDEVPPEAVDGVAAAVG---GWGYTVRPVSARTGAGLAALRAELAG-TYVLAG 167 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SG GKSSLLN L + DIS G G+HTT L+ V D+PG + Sbjct: 168 PSGAGKSSLLNHLHPG-LALRVGDISARLGRGRHTTRHVELFALNAEALVADAPGFNQLE 226 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L L PE + F EF YLG C++R+C H +PGCA+REA R+ Y L Sbjct: 227 LT-LAPELLAGYFPEFRPYLGRCQFRNCLHRDEPGCAVREA------NLERYGMYRDFLA 279 Query: 335 SM---AQVKTRK 343 + AQ + R Sbjct: 280 EVLVSAQKQRRT 291 >UniRef50_B2A2K9 Ribosome small subunit-dependent GTPase A n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2K9_NATTJ Length = 288 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 80/307 (26%), Positives = 144/307 (46%), Gaps = 28/307 (9%) Query: 41 EGIVISRFGMHADVESADGD-VHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKG 95 +G V+ V+ + + C ++ + + GD V+ +G Sbjct: 2 QGRVVKIINDFYYVQGNEKNATIECKLKGNLIKDNNFPLVGDVVLVELTGE------GQG 55 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 ++ + R + L VKP AN+DQ+++V+++ P+ +L ++DR LV ++ Sbjct: 56 MISDLSSRENRL--------VKPAVANVDQVIVVTSVKNPKPNLQLVDRLLVWAYFEGLQ 107 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 ++ +NK +L E +IY+ ++S D L L + + S+ AG Sbjct: 108 GMVCINKREL----DYQKAQELAEIYKTSEINTTLISVKEND-LDHLPKFFENKTSVLAG 162 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 QSGVGKSS+LN L + N +S +G G+HTT +L GG ++D+PG + Sbjct: 163 QSGVGKSSILNTL-NPDLNLEVNPVSRKAGTGKHTTRHCQLLK-AGGGFLVDTPGFNKKK 220 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L + PEQ+ F E + CK+ DC H +P C +++ V I TR+E++ + E Sbjct: 221 LPEIVPEQLELAFPEIKKHSSDCKFNDCSHRKEPDCQVKKLVGT-DIPTTRYEHFVKFFE 279 Query: 335 SMAQVKT 341 + ++ Sbjct: 280 ELVDMER 286 >UniRef50_B9RMG0 GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RMG0_RICCO Length = 500 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 80/313 (25%), Positives = 144/313 (46%), Gaps = 52/313 (16%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ R ++ GD+VV + + V+ +G++E V +R++ + + P Sbjct: 138 VVRAVLKKIRRRVLVGDKVVV----GSIDWVDRRGMIENVFQRSTEI--------LDPPV 185 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN+D ++++ ++ P++ + R+LV E+ I + LNK +L+D+E + ++ Sbjct: 186 ANVDHLLVLFSMDQPKIEPFALTRFLVEAESTGIPLTLALNKSELVDEETLIAWKSRL-- 243 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQK------- 232 R+ GY L S ++ GL L L + ++ G SGVGKSSL+NAL + Sbjct: 244 -RSWGYEPLFCSVESKLGLDSLAYILREQTTVIVGPSGVGKSSLINALRNKPRACDVAEN 302 Query: 233 --------------EILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 E ++S SG G+HTT L GG + D+PG + L + Sbjct: 303 DNWFDPMLGSKWFEEQRVGEVSTRSGRGKHTTRNVSLLPLSAGGYLADTPGFNQPSLLKV 362 Query: 279 EPEQITQGFVEFHDYL-----GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + + + F E L C + DC H +PGC + E R+ Y ++L Sbjct: 363 TKQSLAETFPEIQKMLSSGGPAKCSFNDCLHLGEPGCIVNGDWE-------RYSFYFQLL 415 Query: 334 ESMAQVKTRKNFS 346 + + + R+ F Sbjct: 416 DEI---RIREEFQ 425 >UniRef50_D2NNY6 Predicted GTPase n=2 Tax=Rothia mucilaginosa RepID=D2NNY6_9MICC Length = 440 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 35/305 (11%) Query: 73 LVTGDRVV--WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVI 128 V GD V+ PG A + A+ R S LTRP +P+AAN+D + I Sbjct: 114 PVVGDWVLTQLIPGSGGAAHPAEHKFL-AILPRRSYLTRPSATRESADQPVAANVDMLCI 172 Query: 129 VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL 188 V PE S+ I+RY ++ ++L K DL+ E +A E + + VL Sbjct: 173 VEPCFPEPSIGRIERYTALAHASGVQVALILTKGDLVTAEQLASYRESLGGSVD---TVL 229 Query: 189 MVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEIL----------TND 238 V + P+ + + GR + F G+SG GKS+L+NALL + T+ Sbjct: 230 TVCTDNGYDPAPVAKLVAGRTAAFLGRSGAGKSTLVNALLNPGVDPREDSQEHQVQVTST 289 Query: 239 ISDNSGLGQHTTTAARLYHFPH----------------GGDVIDSPGVREFGLWHLEPEQ 282 + D G G+HTTT+ ++ P G +ID+PGVR + Sbjct: 290 VRDADGKGRHTTTSRQMLVLPGAEGSSEGDSTNAKSSSGTVLIDTPGVRALA-ATSDSTA 348 Query: 283 ITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 I + F + Y C+Y DC H ++PGCA+++A+ +G + RFE Y R++ A+++ R Sbjct: 349 IDETFDDVSGYASACRYSDCSHGSEPGCAVQQAITDGSLDPERFERYRRMIAESARLRLR 408 Query: 343 KNFSD 347 + Sbjct: 409 SQERE 413 >UniRef50_Q28KH3 GTPase EngC n=5 Tax=Rhodobacteraceae RepID=Q28KH3_JANSC Length = 347 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 20/281 (7%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSA 131 VTGD V+ +G+V ER ++LTR G+ + IAAN+D + IV++ Sbjct: 62 VTGDWVL---------ADAAEGLVLRRLERDTLLTRRAAGTGLEAQLIAANVDTLGIVTS 112 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDE-GMAFVNEQMDIYRNIGYRVLMV 190 + ++ ++RYL + P+I+L K D+ DD E + + + + Sbjct: 113 CNADFNVARLERYLAMAASAGCLPLIILTKADMADDPRDYERRAEALSPLASA----IAM 168 Query: 191 SSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 ++ + L+ G+ G SGVGK++L NAL G ++ T I ++ G+HT Sbjct: 169 NAKADNAADMLKPWSKTGQTFALVGSSGVGKTTLANALTGAEE--ATAGIREDDAKGRHT 226 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG 309 TT+ L GG +ID+PG+R L + I F + CK+RDC H ++PG Sbjct: 227 TTSRGLARTIFGGWLIDTPGMRALRLNDAS-DGIGAVFADIEALTEACKFRDCAHLSEPG 285 Query: 310 CAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 CA++ A+ +G + E R + +++ + + + Sbjct: 286 CAVQAAIADGTLDEDRLRRFQKLVREDEMNQEATHERRARE 326 >UniRef50_Q7VEJ4 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Prochlorococcus marinus RepID=RSGA_PROMA Length = 309 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 85/327 (25%), Positives = 143/327 (43%), Gaps = 47/327 (14%) Query: 38 EPDEGIVISRFGMHADVE---------------SADGDVHRCNIRRTIR----SLVTGDR 78 + +GIV++ + V+ C R + S+ GD Sbjct: 7 DRIKGIVLALKANYYIVQIDTINLIPELFKKKIGDHNFRLLCTKRSRLSYKGHSVSVGDF 66 Query: 79 VVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANI-DQIVIVSAILPELS 137 V+ A + G++ V R +++TRP AN+ D I++VS + P Sbjct: 67 VLIE----AIDWTAETGVISFVEPRKNLITRP--------PVANVTDVIIVVSLLDPSFD 114 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 LN + R+L+ E ++ IVL K DL+D++ + ++++ + GY+ + +S +G Sbjct: 115 LNQVSRFLMKAEETGLKVTIVLTKRDLIDEKILEKYDKKL---QTWGYQPIPISIVNGEG 171 Query: 198 LKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 ++ L L ++ + G SGVGKSSL+N LL + I +S G+HTT L+ Sbjct: 172 IQKLSARLKSMKLGVLCGPSGVGKSSLINYLLP-KISIPIGKLSKKLKRGRHTTRHVELF 230 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD--YLGLCKYRDCKHDTDPGCAIRE 314 + D+PG + + EP Q+ Q F E + CK+R+C H +P CAI Sbjct: 231 SIYSDSFIADTPGFNKPEFYT-EPSQVPQLFPELRSQLLIKKCKFRNCMHLNEPDCAISR 289 Query: 315 AVEEGKIAETRFENYHRILESMAQVKT 341 E R+ NY L+ M Sbjct: 290 DWE-------RYSNYKNFLQEMLNYHH 309 >UniRef50_A4S3D3 Predicted protein n=3 Tax=Mamiellales RepID=A4S3D3_OSTLU Length = 352 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 27/298 (9%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ + ++ GD VV + V +G+++ V R S L V+P Sbjct: 14 VARALLKKIKKRVLVGDEVVL----SGVDWVQSRGMIDDVVGRRSEL--------VEPPI 61 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN+DQ ++V A+ P L + + R+LV+ E ++ +VLNK +LL + +A ++ Sbjct: 62 ANVDQALLVFALEQPPLEVKQLTRFLVSMEATKVPFTLVLNKCELLSEVEVADWRARL-- 119 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALL---GLQKEILT 236 + GY ++S T G++ LEEAL G+ ++ AG SGVGKSSL+N L Sbjct: 120 -ESWGYDAKVISVATGQGVEELEEALRGKTTVLAGPSGVGKSSLINRFRFGSALADLQSV 178 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL-- 294 + SG G+HTT L GG + D+PG L + +++ F E D L Sbjct: 179 KGVGTRSGRGKHTTRHVSLLRLDVGGFLADTPGFGYPSLEGFDTDKLAMCFPEIRDALAS 238 Query: 295 --GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 C++ DC H +PGC + + E E R++ Y+ + E + Q+ + + + Sbjct: 239 SDARCQFSDCTHRHEPGCVVVDECWE----ERRYDLYYDLFEEVKQIADTERMASGRE 292 >UniRef50_A6GEY2 Probable GTPase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GEY2_9DELT Length = 374 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 22/295 (7%) Query: 69 TIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQI 126 R+ GD + R E + +V + ER + LTR + +AAN+D++ Sbjct: 56 RKRAPAVGDWAIVRTKGKGGE-RDGDFVVRKLLERATSLTRRAAGSSGRAQVLAANLDRV 114 Query: 127 VIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR 186 ++ S++ + L ++R+L EP++VL K L+D+ A E +G Sbjct: 115 LVCSSLDRDFKLTRLERWLSLVHEGGAEPVVVLTKAGLVDEATRARRVEAAREV-ALGVS 173 Query: 187 VLMVSSHTQDGLKPLEEALTGR----------ISIFAGQSGVGKSSLLNAL---LGLQKE 233 V+ V T GL L+ + G SGVGKS+LLN L G + Sbjct: 174 VIAVDRFTGVGLDALDACVLRAVEEDASSWAPTLALVGSSGVGKSTLLNYLCELAGGEGA 233 Query: 234 ILTNDISDNSGLGQHTTTAARLYHFPHG----GDVIDSPGVREFGLWHLEPEQITQGFVE 289 + T IS G G+HTT+ L P +ID+PG+RE GLW E E + + F E Sbjct: 234 MATGSISSAHGKGRHTTSHRELVALPERDGLRALLIDTPGLREVGLWG-EGEGVDKTFAE 292 Query: 290 FHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKN 344 C++ DC+H +PGCA+R AV+EG++ R E Y R+++ R N Sbjct: 293 IGALARGCRFGDCQHAGEPGCAVRAAVDEGRLEGRRLEAYRRLVDERETTARRAN 347 >UniRef50_D0LXL5 GTPase EngC n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LXL5_HALO1 Length = 361 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 133/289 (46%), Gaps = 29/289 (10%) Query: 54 VESADGDVHR---CNIR-----RTIRSL-------VTGDRVVWRPGKPAAEGVNVKGIVE 98 V + GD++ C R +R TGD V A + Sbjct: 34 VSADSGDIYELAGCRARFGQLAGRLRHPDHASARPTTGDWVAVSDDDDNAR-------IH 86 Query: 99 AVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPI 156 + +R S L R + +AAN+D +V+A +L+ ++RYL A +P+ Sbjct: 87 LLLDRRSALVRRAAGKATHAQVVAANVDVFFLVTAADRDLNPRRLERYLAAVWDSGAQPV 146 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRISIFAGQ 215 IV+NKIDL+D++ A +++ V VS+ G+ L L G G Sbjct: 147 IVVNKIDLVDEDEAARALHRVEAIAGAA-SVAGVSAMAGSGVDALAPFLGVGATVGLIGS 205 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKS+L N LLG + + + G G+HTTT L P GG +ID+PG+REFG Sbjct: 206 SGVGKSTLSNRLLGDEMQAAAA--TRGDGKGRHTTTRRELRVLPGGGVLIDTPGMREFG- 262 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 + F E + C++RDC HD +PGCA+ AV EG++ E Sbjct: 263 MLGGEGGLEVAFAELAEVAARCRFRDCTHDDEPGCAVLAAVAEGELGEE 311 >UniRef50_Q73J49 GTPase YjeQ, putative n=1 Tax=Treponema denticola RepID=Q73J49_TREDE Length = 364 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 82/323 (25%), Positives = 157/323 (48%), Gaps = 28/323 (8%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAE 89 E + G +I G + D + ++ + + GD + + + ++ Sbjct: 19 EKEVGRIIFFGGTSYKIICKDVEK-EARLKGSFKKECEISGYYPTVGDWIGFESQENSSI 77 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGV---KPIAANIDQIVIVSAILPELSLNIIDRYLV 146 +++ ++ER + ++R D G+ + IAANID I ++ + +LN + RY+ Sbjct: 78 -----ALIDFLYERKNKISRTDPRLGIELEQIIAANIDTAFICMSLNKDSNLNRLARYVF 132 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 A IE +++L K DL + A N IY ++ +V +S D L+ ++ Sbjct: 133 AL--QNIETVLLLTKADLSETREDAE-NLIKKIYPHL--KVYCISIFEPDSLENIKYYFK 187 Query: 207 -GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF-PHGGDV 264 G+ S+ G SGVGKSSL+N+L G + + T++I+ G HTTT ++ G + Sbjct: 188 KGKTSVLLGSSGVGKSSLINSLTGKEI-LRTSEINKKIDKGVHTTTNRQIISLGEDAGVI 246 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 +D+PG++ G+W + + F + + C + DC H + GCA+ EA++ G + + Sbjct: 247 MDTPGMKVLGIWDSDSGE--NSFADITELKSKCLFSDCTHTCEKGCAVLEALKTGLLDKN 304 Query: 325 RFENYHRILESMAQVKTRKNFSD 347 R+E Y ++L+ ++K R+ Sbjct: 305 RYELYLQLLKE-DRIKIRREKRQ 326 >UniRef50_B3EHA2 GTPase EngC n=4 Tax=Bacteria RepID=B3EHA2_CHLL2 Length = 356 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 85/335 (25%), Positives = 140/335 (41%), Gaps = 31/335 (9%) Query: 31 YDDNLFGEPDE-GIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVW 81 + D + E V + + + G++ + GD V Sbjct: 16 HADAIRSEGQSVARVSAVDRNSCMIRNEQGEI-PAELSGKFLFNVESPADLPCVGDWVAV 74 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLN 139 + A I+ + R + L R V + IAANID +V + + +L Sbjct: 75 QYHNDGAL-----AIIHGLFPRRTFLRRKRAGTEVDYQMIAANIDIAFVVQSCHFDFNLA 129 Query: 140 IIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGY--RVLMVSSHTQDG 197 ++RYLV +E I+VL K DL+ E + E++ R G RV+ +S+ G Sbjct: 130 RLNRYLVMAADGHVESIVVLAKTDLISGEEL---QEKLAAIREAGISARVIALSNLNGSG 186 Query: 198 LKPLEEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 + + L R G SGVGK++L+N L+G + T +S TT +L Sbjct: 187 FEEFRQLLLPRGTYCLLGSSGVGKTTLINHLIGRD-DFDTKAVSGTGEGTHTTTR-RQLI 244 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAV 316 G ID+PG+RE GL E + +GF + C+Y DC H + GCA+ A+ Sbjct: 245 VLDEGSMFIDTPGMRELGLLGAS-EGVNKGFEDITGLSRACRYADCSHTGESGCAVLAAI 303 Query: 317 EEGKIAETRFENYHRI-----LESMAQVKTRKNFS 346 E G+++E R+ Y ++ ++ + RK Sbjct: 304 EAGELSEERYAGYLKLRKESEYHELSYLDKRKKER 338 >UniRef50_B6W6J9 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W6J9_9FIRM Length = 287 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 153/306 (50%), Gaps = 29/306 (9%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIV 97 G +I V S D + C R R + GD V + + + KG + Sbjct: 3 GKIIKSQKEIYYVLS-DEKSYMCKARGVFRNKNIKPLVGDNVEFDVTEYS------KGYI 55 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPI 156 + +R + + RP+ ANIDQI+ I P L+L ID+Y+ CE + ++ I Sbjct: 56 TKILDRKNQIKRPNI--------ANIDQILYFITIKNPSLNLFNIDKYISMCEYINVDVI 107 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I+++K DL D + + F+ +Y IGY+++ + ++ + E L G+ S +G S Sbjct: 108 IIVSKKDLADKKDLDFIK----MYEKIGYKLIFIDNYKDFPESEILEILRGKTSAVSGSS 163 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKS+ L+ L+ +K+I IS+ S G++TT +++ ++ D+PG F + Sbjct: 164 GVGKSTFLSNLV--EKDIEIGSISEKSKRGKNTTRHVEIFNLEKNTNIFDTPGFDSFDID 221 Query: 277 HLEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 ++ E + F EF + CK++DC H +P C +++ + + I +TR+ENY + E Sbjct: 222 FIDDEKDLKYCFREFDN--NSCKFKDCNHINEPKCKVKDDLSKNIIEKTRYENYLTLFEE 279 Query: 336 MAQVKT 341 + + + Sbjct: 280 IKKRRQ 285 >UniRef50_A0JYB3 GTPase EngC n=8 Tax=Micrococcineae RepID=A0JYB3_ARTS2 Length = 371 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 97/355 (27%), Positives = 163/355 (45%), Gaps = 49/355 (13%) Query: 13 RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADG----DVHRCNIRR 68 R+ N + +K++P +DD + G I+ G + V D V R Sbjct: 14 RIRPNKKGSRPRTKDRPSHDDAVTGR----IITVDRGRYTAVVGEDSGNERTVIAARARE 69 Query: 69 TIRSLVT-GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQ 125 RS V GD V A + + + +R ++L R D + + AN DQ Sbjct: 70 LRRSPVVAGDFVSLVGDVSGA--PDTLARLVKIQDRRTLLRRSADDTDPIERAVVANADQ 127 Query: 126 -IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 +V+V+A PE IDR LVA IEP++++ K D+ D + + YR++ Sbjct: 128 LVVVVAAANPEPRTGFIDRALVAAYDAGIEPLLLVTKADVKDPTEL------LSNYRHLD 181 Query: 185 YRVLM----------VSSHTQDGLKP---------LEEALTGRISIFAGQSGVGKSSLLN 225 + V++ + + + DGL L L G++++ G SGVGKS+++N Sbjct: 182 FPVIISRTADAAASGIDARSDDGLSARLDSDAVSQLRAHLNGKVTVMLGHSGVGKSTMVN 241 Query: 226 ALLGLQKEILTNDISDNSGLGQHTTTAARLYHF---PHGGDVIDSPGVREFGLWHLEPEQ 282 AL G ++ T ++ +G G+HT+++A P G +ID+PG+R FGL H++P++ Sbjct: 242 ALTGAER--ATGGVNAVTGRGRHTSSSALALRISDAPAGSWIIDTPGIRSFGLAHVDPDR 299 Query: 283 ITQGFVEFHDYLGLCKYRDCKHDTDP-GCAIREAVEEGKIAET---RFENYHRIL 333 I + F + C+ R CKHD C + V +G + R + R+L Sbjct: 300 ILRSFPDLEPGTDACE-RGCKHDASAVNCGVDAWVAQGHAGPSGAARLASLRRLL 353 >UniRef50_A3CQN2 GTPase, putative n=3 Tax=Streptococcus RepID=A3CQN2_STRSV Length = 213 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 80/220 (36%), Positives = 126/220 (57%), Gaps = 13/220 (5%) Query: 129 VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL 188 +SA P+ + N++DR+LV E +I PII ++K+DLL+DE V + Y++IGY V+ Sbjct: 1 MSAKEPDFNANLLDRFLVLLEHKRIHPIIYISKLDLLEDEQSLDV--YVQAYQSIGYEVI 58 Query: 189 MVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQH 248 + + L LTG+I++F GQ+GVGKS+LLN + ++ T +IS++ G G+H Sbjct: 59 KTT-------EELLPLLTGKITVFMGQTGVGKSTLLNKIAP-DLQLETGEISESLGRGRH 110 Query: 249 TTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP 308 TT A Y+ +GG + D+PG E + Q F E ++ CK+R C H +P Sbjct: 111 TTRAVSFYNL-NGGKIADTPGFSSLDYEVSTAEDLNQAFPEIAEFSQSCKFRTCTHTHEP 169 Query: 309 GCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDT 348 CA++ AVE G+IA RF+NY + L + R+ + Sbjct: 170 ACAVKPAVESGQIASFRFDNYLQFLSEIEN--RRETYKKV 207 >UniRef50_B5RLH3 Putative ribosome biogenesis GTPase rsgA n=22 Tax=Borrelia RepID=RSGA_BORDL Length = 313 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 22/301 (7%) Query: 51 HADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE 102 ++ VE V+ I+ LV GD V K ++ E Sbjct: 16 YSVVEVNTNTVYEGVIKGKFLNTREKEYSPLVPGDFV------CGDIYDEHKVYIKERME 69 Query: 103 RTSVLTRPDFYDGV-KPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLN 160 R +V R + + + I +NID I+IVS+ PE + IDR L+ E I PII++N Sbjct: 70 RRNVFWRYNKKVALRQVIVSNIDNILIVSSATLPEFKNSFIDRTLIVAEEQGITPIILVN 129 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220 K+D + V+ + IY +GYRV+ S T G+ +++ + + F GQSGVGK Sbjct: 130 KVD---EGINLRVDSFIKIYEYLGYRVIKTSVVTLQGIDEVKKIIKNSRTSFIGQSGVGK 186 Query: 221 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP 280 SSL+N ++ L N+IS G+HTT A +H +ID+PG++EFG+ L Sbjct: 187 SSLIN-VIDLNASQAINEISYKYARGRHTTVYAVAFH-SDNKILIDTPGIKEFGIEGLGY 244 Query: 281 EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 ++ F EF + LC++ C H +P C + + KIAE R+ +Y +I + + K Sbjct: 245 LELKYYFKEFKYFNDLCRFNSCLHINEPNCFVISQI-GFKIAEARYNSYLKIFSELKRYK 303 Query: 341 T 341 + Sbjct: 304 S 304 >UniRef50_B9HDG9 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HDG9_POPTR Length = 394 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 81/292 (27%), Positives = 146/292 (50%), Gaps = 31/292 (10%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ R ++ GD+VV + + V+ +G++E V +R+S + + P Sbjct: 89 VVRAVLKKIKRRVLVGDKVVV----GSIDWVDRRGMIENVFQRSSDI--------LDPPV 136 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN+D+++++ ++ P+L ++ R+L+ E+ I + LNK +L+D + ++ + ++ Sbjct: 137 ANVDRLLVLFSVEQPQLESFVLTRFLIEAESTGIPITLALNKAELVDQQVLSDWDTRL-- 194 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDI 239 R+ GY L S ++ GL L L + ++ G SGVGKSSL+NAL + Sbjct: 195 -RSWGYEPLFCSVDSKMGLDSLASVLRDQTTVIVGPSGVGKSSLINALRNKPNSQRVGKV 253 Query: 240 SDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL--- 296 S SG G+HTT L GG + D+PG + L + + + Q F E LG Sbjct: 254 STRSGRGKHTTRNVSLLPLGGGGYLADTPGFSQPSLLKVTKQSLAQYFPEIRKMLGDNEQ 313 Query: 297 --CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 C + DC H +PGC ++ E R+ Y ++L+ + + R+ F Sbjct: 314 AKCAFNDCLHVGEPGCIVKGDWE-------RYPLYFQLLDEI---RIREEFQ 355 >UniRef50_B5W2A4 GTPase EngC n=2 Tax=Arthrospira RepID=B5W2A4_SPIMA Length = 406 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 143/373 (38%), Gaps = 92/373 (24%) Query: 35 LFGEPDEGIVISRFGMHADV-----ESADGD-------------VHRCNIRRTIRSLVTG 76 + + G V++ V +S G+ R +++ + ++ G Sbjct: 1 MTADRIMGTVVAGQANFYQVCLSPDQSPSGNGAGGEAKRMTLLCTCRARLKKIGQKVMVG 60 Query: 77 DRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPE 135 DRVV + +G++ + R + L RP AN D +++V A+ P+ Sbjct: 61 DRVVV----SCPDWQGGRGVISEILPRKTELARPSI--------ANADHLLLVFAVAEPD 108 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 195 + R+L+ E+ +E + NK DLL + + ++M R GY LM+S + Sbjct: 109 PDPVTLSRFLLKAESTGLEVSLCFNKCDLLPPDSLRQWYDRM---RGWGYDPLMISVYHG 165 Query: 196 ----------------------DGLKP-------------------------LEEALTGR 208 GL L + L + Sbjct: 166 VEYRFEGDRMETSPTLNLSSNSAGLDKPGFGESSPSLTRDGDRNQVSGTANSLLDRLRLK 225 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 + +G SGVGKSSL+N L+ + ++S G G+HTT L+ +GG + D+P Sbjct: 226 TTAISGPSGVGKSSLINKLIP-NSHLRVGEVSGKLGRGRHTTRHVELFELHNGGFLADTP 284 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYL--GLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 G + L +P Q+ F E D L G C++ DC H +P C +R E R+ Sbjct: 285 GFNQPEL-QCDPHQLGNYFPEIRDRLTKGKCQFDDCLHREEPSCVVRGDWE-------RY 336 Query: 327 ENYHRILESMAQV 339 Y LE + Sbjct: 337 PQYLHFLEEAIEA 349 >UniRef50_B1AIK5 Putative ribosome biogenesis GTPase rsgA n=15 Tax=Ureaplasma RepID=RSGA_UREP2 Length = 303 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 150/302 (49%), Gaps = 29/302 (9%) Query: 44 VISRFGMHADVESADGDV-HRCNIRRTIRS------LVTGDRVVWRPGKPAAEGVNVKGI 96 +IS + V D + + + + + GD V E + + Sbjct: 5 IISVVANNFYVHLYDLKIQIKAIPKGIFKHNSHELKPMVGDDVE-------VELIGNTYL 57 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEP 155 + ++ER + L RP ANID ++IV + + P+L+ +++YL E I+ Sbjct: 58 ITKIYERYNQLIRPK--------VANIDIVLIVVSIVQPDLNTLSLNKYLAFYEARNIKN 109 Query: 156 IIV-LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 +++ L+K DL ++ +N+ + Y+ Y V ++ ++ + L+E + + AG Sbjct: 110 VLIGLSKYDLANNHLKQKINKLILDYKKNNYAVFIL--TKENDILLLKEKIKSKTLCLAG 167 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGKS+L+N L + T +IS G+HTTT+ +L F +G ++D+PG Sbjct: 168 NSGVGKSTLINKL-DPSIQQRTQEISHFLNRGKHTTTSTKLISFANG-FLVDTPGFGNLE 225 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 + +L ++ F +F +Y CK+ +C H +P CAI++AV+E I R+++Y +I++ Sbjct: 226 V-NLTKNEMANAFNDFANYARFCKFSNCLHIEEPECAIKKAVDEKLIVNWRYDDYLKIIK 284 Query: 335 SM 336 + Sbjct: 285 EL 286 >UniRef50_C4DFS4 Predicted GTPase n=2 Tax=Actinomycetales RepID=C4DFS4_9ACTO Length = 363 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 95/317 (29%), Positives = 144/317 (45%), Gaps = 31/317 (9%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRSLV---------TGDRVVWRPGKPAAEGVN 92 G V V +A G V R ++ + +V GD VV R + Sbjct: 29 GRVARVDRGVCTVLTAGGTV-RASLAGRMLGVVAKDPLSMPSVGDWVVVRT------WDD 81 Query: 93 VKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACET 150 + +EAV R S + R + IAAN D + IV A+ P+ I+R Sbjct: 82 DRRTIEAVLPRRSAIVRSTAGKAAEGQAIAANADAVAIVEALDPDPDFGRIERLAALAYD 141 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRI 209 P++VL K D + D + ++ + VL VS+ T GL L E L GR Sbjct: 142 SGATPLLVLTKADAVPDPEL-LADDLSAAMPDA--PVLTVSAVTGQGLDALAEYLKPGRS 198 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 G SG GKS+L+NAL G + + T + G G+HTT+ L PHGG +ID+PG Sbjct: 199 LALLGASGAGKSTLVNALAGAEV-MATRGLR-ADGRGRHTTSHRSLVPVPHGGAIIDTPG 256 Query: 270 VREFGLWHLEP-------EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIA 322 +R GL+ P + + + F + C++ DC+HDT+PGCA+ A+++G + Sbjct: 257 LRVVGLFDRRPGDAATPVDGLARAFGDLDALAAQCRFNDCRHDTEPGCAVLAAIDDGLLT 316 Query: 323 ETRFENYHRILESMAQV 339 R EN+ ++ A Sbjct: 317 ARRLENWRKLQREQAFE 333 >UniRef50_O64802 T1F15.10 protein n=14 Tax=Magnoliophyta RepID=O64802_ARATH Length = 450 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 65/326 (19%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ R ++ GD+V+ + + V+ +G++E V R S + + P Sbjct: 73 VVRAVLKKIRRRVLVGDKVLV----GSIDWVDRRGMIENVFHRRSEI--------LDPPV 120 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN+D ++++ ++ P+L + R+LV E+ +I + LNK +L+ +E + ++ Sbjct: 121 ANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTRIPLTLALNKTELISEEELETWKIRL-- 178 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ-------- 231 R Y L S T+DGL + L + S+ G SGVGKSSL+N L Sbjct: 179 -RGWNYEPLFCSVGTKDGLDDIAFVLRDQTSVIVGPSGVGKSSLINVLRSNHGGGVVEDE 237 Query: 232 -----------------------------KEILTNDISDNSGLGQHTTTAARLYHFPHGG 262 + ++S SG G+HTT L GG Sbjct: 238 NWFEPLKFCLPDSYELSFCDIQMLGNKWFDDQRVGEVSSRSGRGKHTTRNVSLLPVSEGG 297 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYL--GLCKYRDCKHDTDPGCAIREAVEEGK 320 + D+PG + L + + F E + + C +RDC H +PGC ++ E Sbjct: 298 YLADTPGFNQPSLLKVTKHSLAHCFPEIRNMIESEKCGFRDCLHIGEPGCVVKGDWE--- 354 Query: 321 IAETRFENYHRILESMAQVKTRKNFS 346 R+ Y ++L+ + + R+ F Sbjct: 355 ----RYPYYLQLLDEI---RIREEFQ 373 >UniRef50_UPI0001982B97 PREDICTED: hypothetical protein isoform 4 n=2 Tax=Vitis vinifera RepID=UPI0001982B97 Length = 519 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 83/344 (24%), Positives = 144/344 (41%), Gaps = 83/344 (24%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ R ++ GD+V+ + + V+ +G++E V R S + + P Sbjct: 126 VVRAVLKKIKRRVLVGDKVLV----GSIDWVDRRGVIENVFSRKSEI--------LDPPV 173 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN+D ++++ A+ P+L + + R+LV E+ I + LNK +L+D+E ++ Sbjct: 174 ANVDHLLVLFAMEQPKLEVYSLTRFLVEAESTGIPITLALNKSELVDEETRVAWKSRL-- 231 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ-------- 231 R+ GY + S ++ GL L +L + ++ G SGVGKSSL+NAL Sbjct: 232 -RSWGYGPVFCSVESKFGLDTLAFSLREQTTVIVGPSGVGKSSLINALRSNHPLINVSSE 290 Query: 232 ------------------------------------------KEILTNDISDNSGLGQHT 249 +E ++S SG G+HT Sbjct: 291 ENNWFDSVAICLDPICPHVSVSISLCTVLRMHHFQILGSKLLEEQRVGEVSVRSGRGKHT 350 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL-------GLCKYRDC 302 T L GG + D+PG + L + + + Q F E L C + DC Sbjct: 351 TRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLAQTFPEIRKLLSGSANEPEKCSFNDC 410 Query: 303 KHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 H +PGC ++ E R+ Y ++L+ + K R+ F Sbjct: 411 LHLGEPGCVVKGDWE-------RYPYYFQLLDEI---KIREEFQ 444 >UniRef50_C4FBQ3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FBQ3_9ACTN Length = 382 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 81/273 (29%), Positives = 126/273 (46%), Gaps = 16/273 (5%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVL--TRPDFYDGVKPIAANIDQIVIVS 130 GD V R G++ V R + R + +AAN+D I IV Sbjct: 104 PSVGDVVAVRVTSGHD-----MGVILHVLPRRTSFERWRGKNRGERQVLAANVDVIFIVQ 158 Query: 131 AILPE-----LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGY 185 + E L + + R LV +P++VL K+D + +A V + G Sbjct: 159 PLGAERDTLPLMRDRVARSLVLARDCGADPVVVLTKVDRCEPAEVANVCGALRRLAGTGV 218 Query: 186 RVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSG 244 RV+ SS T +GL + + G + + G+SG GKS+LLN LLG + + TN + + Sbjct: 219 RVIATSSLTGEGLDEVRSCIPQGSVGMILGESGAGKSTLLNTLLGSEA-LETNAVRERDD 277 Query: 245 LGQHTTTAARLYHFPHG-GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 G+HTT A + P G + D PG+R L E + + F E + C++ DC Sbjct: 278 AGRHTTVARIMVALPEPCGVIADCPGLRSLPLVGHE-RGLARSFPEIVEASRACRFNDCT 336 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 H +PGCA+RE VE G+I ++R + + + M Sbjct: 337 HLHEPGCAVREGVECGEIEQSRLDAFLSLAREM 369 >UniRef50_A3V5J3 Putative uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V5J3_9RHOB Length = 345 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 128/270 (47%), Gaps = 18/270 (6%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVS 130 + GD V+ P + + V +R + L+R Y + IAAN+D + I + Sbjct: 63 VAVGDFVLCAPA---------QYRLIRVLDRQTELSRGTEYHTGDKQLIAANLDTLFITT 113 Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMV 190 + + + ++RYL + P+IVL K D DD F ++ + R++ VL V Sbjct: 114 SCNADFNPARLERYLALAHDAGVRPVIVLTKADQTDDPA-GFADQARALGRDLA--VLAV 170 Query: 191 SSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 ++ D G+ FAG SGVGK+++ NAL G T DI D+ G+HT Sbjct: 171 NAKAADLPAHFAPWCGQGQTIAFAGTSGVGKTTIANALTGGNA--ATRDIRDDDARGRHT 228 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG 309 TT L+ GG +ID+PG+R GL + I F E D CK+RDC H+ +PG Sbjct: 229 TTGRSLHRMLAGGWLIDTPGMRGLGLAEVGF-GIDATFPEISDLAAQCKFRDCAHEREPG 287 Query: 310 CAIREAVEEGKIAETRFENYHRILESMAQV 339 CA++ AV G I R + ++ Q Sbjct: 288 CAVQAAVAAGAIDPDRLARFKKLKSENTQA 317 >UniRef50_B5Y7I4 Ribosome small subunit-dependent GTPase A n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7I4_COPPD Length = 289 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 27/306 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTI---RSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 G V+ R + V S + V+ +++ + ++ DRV + P VE Sbjct: 7 GRVLRRERYNVLV-SYENSVYLGLVKKKVWEQDKVLVNDRVWFEPITDTEVS------VE 59 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPII 157 R + RP AN+D +V V + P+ + +D L I ++ Sbjct: 60 RTTGRKNYFLRP--------PVANLDLLVYVHSFKNPQCDVRYLDLTLGLATLQNIPVLV 111 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSG 217 + +K DLL DE + +Y ++GY V++ S + L L+E L G+ +F+G +G Sbjct: 112 LFHKADLLRDED---IQPWTSLYTSLGYDVMVTSVYYD--LSALKERLRGKTVLFSGPTG 166 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 VGKSSL+ AL + DIS G G+HTT+ L V+D+PG + Sbjct: 167 VGKSSLVKALW-KDASVRVGDIS-KVGRGKHTTSWVELLPLDD-TYVVDAPGFSLLEMPA 223 Query: 278 LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 + P I + F E C + DC H +P CA++EAV++G IAE+R+ +Y L+ Sbjct: 224 MNPWDIQRMFPEIETTAKGCFFSDCLHLKEPSCAVKEAVKKGLIAESRYNSYLYFLDKQQ 283 Query: 338 QVKTRK 343 + ++ Sbjct: 284 EEAKKR 289 >UniRef50_Q4A6T0 Putative ATP/GTP-binding protein n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6T0_MYCS5 Length = 276 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 36/304 (11%) Query: 43 IVISRFGMHADVESADGD----VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 V FG A+V + + +++ + GD V ++ Sbjct: 3 RVFELFGQTANVCDLENNCKLLPFAGRLKKLKITPKVGDIVEVEND-----------LIT 51 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPII 157 + R + L RP ANIDQ+++ ++ P+ S ++D+YL E+ I+ II Sbjct: 52 DIKPRKNELIRPK--------VANIDQVLVFLSVKEPDFSSFLLDKYLAIVESKNIDLII 103 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSG 217 L K DL + N Y Y+V ++SS + +++ + SI GQSG Sbjct: 104 FLTKSDL----DLELANHWKQKYEMQNYKVFLLSS-NDNNYDEIKKLFDKKFSIVMGQSG 158 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 VGK++ +N + T IS + G+HTTT+A++ F +G +IDSPG Sbjct: 159 VGKTTFINNI--SNNNYKTQQISKSLSRGKHTTTSAKIISFLNG-FLIDSPGFSSL---D 212 Query: 278 LEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 +E E + + ++ F + LC+++DC H+ + C ++ + + E R++NY ++L+ Sbjct: 213 VEKEINLNKSYLNFKELAKLCEFKDCMHNFEKNCNVKLNLNSNLVPEFRYKNYLKLLKEQ 272 Query: 337 AQVK 340 + K Sbjct: 273 NERK 276 >UniRef50_Q98PN8 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Mycoplasma pulmonis RepID=RSGA_MYCPU Length = 272 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 40/303 (13%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIV 97 G V D++ D +R +R+ V GD VV+ + Sbjct: 3 GRVYQVISGFYDIKCED-KFYRVRAIGNLRNLKLNPVVGDLVVFDES------------L 49 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPI 156 + R ++L RP ANIDQ +IV ++ P+ S ++D++L E +I+ + Sbjct: 50 TKIEPRKNILIRPK--------VANIDQAIIVISLDQPKFSSFLLDKFLSIIEFQKIKVV 101 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I+ K DL E + + + Y+ + S ++ K L + +IS+ GQS Sbjct: 102 IIFTKADLNTKEDIGYYLKT--------YQSYLTSLDDENSYKKLNDIFEKKISVLVGQS 153 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGK+++LN + T +IS G G+H+T ++ F + G +ID+PG + Sbjct: 154 GVGKTTILNKV--SLNNFFTQNISKALGRGKHSTRVVKMIDF-NNGQIIDTPGFSSIEI- 209 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTD--PGCAIREAVEEGKIAETRFENYHRILE 334 + + +++ F F Y CKYR C H + C I++ V+ +I R+ NY ++L+ Sbjct: 210 QMSQKDLSKSFESFDKYSQRCKYRHCLHQNERLEDCNIKQLVQSQEIPLFRYNNYLKLLD 269 Query: 335 SMA 337 + Sbjct: 270 EVK 272 >UniRef50_Q46I43 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Prochlorococcus marinus RepID=RSGA_PROMT Length = 312 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 90/317 (28%), Positives = 140/317 (44%), Gaps = 45/317 (14%) Query: 41 EGIVISRFGMHADVESAD------------GDVHRCNIRRTIRS-----LVTGDRVVWRP 83 +GIV++ VE G + IRR+ + + GD V Sbjct: 10 KGIVVALKANFLIVEIDHKNFKDHSFDQFYGKIRLLCIRRSKLNYQGLFIDVGDIVCVE- 68 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVI-VSAILPELSLNIID 142 + + N + +V V R S L RP AN+ + I +SA P + Sbjct: 69 ---SIDYKNKRAVVSDVEPRQSFLKRPA--------VANVTLVSICISADEPLFDMEQTS 117 Query: 143 RYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLE 202 R+L+ E IEP+I+L KIDL+ + ++ +++ GY + VS H G+ L Sbjct: 118 RFLLTAECANIEPLIILTKIDLITKNDLILY---INKFKSWGYDCIPVSIHNSQGIDSLI 174 Query: 203 EALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 E L ++++ AG SGVGK+SL+N L+ + T+ +S G HTT L+ +G Sbjct: 175 ERLRKTKLTVLAGPSGVGKTSLINHLIPT-VSLPTSSVSKKLKRGTHTTRHVELFAIGNG 233 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL--GLCKYRDCKHDTDPGCAIREAVEEG 319 + D+PG + EP F EF L CK+R+C H +PGC I + +E Sbjct: 234 SLLADTPGFNRPEIV-CEPSDFAFLFPEFRTQLSNSQCKFRNCLHRDEPGCVIDKDLE-- 290 Query: 320 KIAETRFENYHRILESM 336 R+ Y + LE M Sbjct: 291 -----RYPFYRQNLEEM 302 >UniRef50_Q601H2 Putative ribosome biogenesis GTPase rsgA n=4 Tax=Mycoplasma RepID=RSGA_MYCH2 Length = 285 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 35/302 (11%) Query: 41 EGIVISRFGMHADVESA-DGDVHRCNIRRTIR-----SLVTGDRVVWRPGKPAAEGVNVK 94 +G V+ DV + ++ + S + GD V + K Sbjct: 2 KGQVVRIIAGFYDVVDLKNRKLYPLLRGSGLLRLNETSPIVGDFVDFE----------EK 51 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G ++ ++ER + L RP ANIDQ ++ +I P S ++D++L+ E I Sbjct: 52 GFIKKIYERKNQLIRPK--------VANIDQALVFISIREPNFSSLLLDKFLLVIEAKNI 103 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 I+++ KIDL + + Y+ + Y + +++ + L+ L +++ Sbjct: 104 PVILLVTKIDLDSN-----FENLLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVI 158 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQ+GVGK+S +N L K+ +IS G+HTT ++ +IDSPG F Sbjct: 159 GQTGVGKTSFINNFL--DKKFAIQEISQTLNRGKHTTRVVQIIE-KENFRIIDSPGFSSF 215 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP--GCAIREAVEEGKIAETRFENYHR 331 + +I F F + CK+R C H + C I+ A+++GKI E R++NY Sbjct: 216 SYSEISKNEIRNAFKIFKKFSSDCKFRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLY 275 Query: 332 IL 333 L Sbjct: 276 FL 277 >UniRef50_A4E9Q8 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9Q8_9ACTN Length = 317 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 87/311 (27%), Positives = 136/311 (43%), Gaps = 20/311 (6%) Query: 39 PDEGIVISRFGMHADVESADGDVHR------CNIRRT--IRSLVTGDRVVWRPGKPAAEG 90 G V+ V +AD R + GDRV R Sbjct: 1 MQLGAVVRLDRGFPLVVTADDTFRAEHAVGFAKSRGEDEVLLPAVGDRVAVRRAPGHD-- 58 Query: 91 VNVKGIVEAVHERTSVL--TRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVA 147 G++E V R + R + + +N+D ++IV A+ E+ L+ + R LV Sbjct: 59 ---MGVIECVLPRRTSFERWRGRARGERQVLCSNVDSVLIVQALGAGEVLLDRVARSLVL 115 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-T 206 EP++VL K D D E + +++ RV++ SS GL + + Sbjct: 116 ALDCDAEPVVVLTKADRCDAEELERDLDRVRRLVGPDVRVIVTSSAEGRGLDEVRICVPA 175 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG-GDVI 265 G ++ G+SG GKS+LLNALLG + T + + G+HTT A + P G + Sbjct: 176 GSCAMILGESGAGKSTLLNALLGHD-TLATGGVRERDDQGRHTTVARVMVALPGDAGVIA 234 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG+R L E + + F E + C++ DC H +PGCA+REA + G+I R Sbjct: 235 DAPGLRSLPLVGHE-RGLARAFPEIVEASRACRFGDCTHTHEPGCAVREAEDAGQIDSLR 293 Query: 326 FENYHRILESM 336 E + + SM Sbjct: 294 LETFQSLASSM 304 >UniRef50_Q6XR83 Uvs038 n=3 Tax=cellular organisms RepID=Q6XR83_9BACT Length = 349 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 21/312 (6%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVN 92 ++ ++ +++G+ + L GD V+ N Sbjct: 26 ESNVAATFPARIVEIHREWMQFHNSEGEYRARALPALGVGLAVGDWVIVESRP------N 79 Query: 93 VKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 + + E + ++R + + N+D ++V + + +L ++RYL + Q Sbjct: 80 NEYWITQRMESVTQISRRTHEGNRQILVTNVDTALLVMGLDNDFNLRRMERYLAIVQAAQ 139 Query: 153 IEPIIVLNKIDLLDD--EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRI 209 + P+IVL K D+ D+ E + + +++ ++ V+ + + L L G+ Sbjct: 140 VMPVIVLTKQDIADNIAEKLEKIKQRL----PTHIPIIAVNGLHESTVMALAPWLRPGQT 195 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 + G SG GKS+L N L + T D+ + G+HTTT+ L+ +G +ID+PG Sbjct: 196 LVLLGSSGAGKSTLTNTLTSSAQ--PTGDVRKDDSKGRHTTTSRSLHQCTNGACIIDTPG 253 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +R + + E + F + C++RDC+H +PGCA+R V R NY Sbjct: 254 LRSWS-PDADEESLGLAFDDITTLAMSCRFRDCEHQDEPGCAVRNVV-----DADRLHNY 307 Query: 330 HRILESMAQVKT 341 ++L + + + Sbjct: 308 QKLLREVRRSQQ 319 >UniRef50_C8W7M5 GTPase EngC n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7M5_ATOPD Length = 394 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 91/366 (24%), Positives = 159/366 (43%), Gaps = 50/366 (13%) Query: 16 ANHQRRLKTSKEKPDYDDNLFGEPDEGI---------VISRFGMHADVESADGDVHRCNI 66 ++ +S + Y D + +G+ V+ V S G V R Sbjct: 31 PAFEQLTPSSAQMQAYTDVVSELEAQGVSRQMMTMACVVRLDRGFPAVVSEQG-VFRAEF 89 Query: 67 -----RRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPI 119 + ++ GD V R + GI+EA+ R + + R + + Sbjct: 90 AARVTKGQNSTVAVGDWVCARIPESHD-----MGIIEAILPRETDIARWKGGARGQKQTL 144 Query: 120 AANIDQIVIVSAILPE-LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 AAN+D +++V A+ E +S++ I R V + +VL K D+ E +A E Sbjct: 145 AANVDLVLVVQALDGETISVDRIVRSAVISKDCGAACAVVLTKSDVAGPELLA--QEISS 202 Query: 179 IYRNIGYRVLMV---SSHTQD-------------------GLKPLEEALT-GRISIFAGQ 215 I +G V +V S + G+ + + G I+I G+ Sbjct: 203 ITAALGSTVKIVATASKLEGEKTDVLADLAQTAQDLGAAWGIDAVRNLVPYGSIAIVLGE 262 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SG GKS+LLNALLG + + T ++ ++ G+HTT A R+ P G ++D PG+R + Sbjct: 263 SGAGKSTLLNALLGHEA-LETGEVRESDKAGRHTTVARRMVALPEAGVIVDEPGLRSLPI 321 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 E + + F + CK+RDC H +PGC++++A+ EG+I E + + Y + + Sbjct: 322 VGHE-RGLQKVFPHISEAAQTCKFRDCTHTHEPGCSVQDALHEGQITEPQLKAYLSLAKE 380 Query: 336 MAQVKT 341 M + + Sbjct: 381 MRESQQ 386 >UniRef50_Q6KH84 Predicted GTPase protein n=1 Tax=Mycoplasma mobile RepID=Q6KH84_MYCMO Length = 219 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 126/225 (56%), Gaps = 10/225 (4%) Query: 116 VKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 +P +N+DQI++V ++ P+ + +D+ L+ E I+P+I+ K DLL + Sbjct: 2 TRPKVSNLDQIILVVSLKEPDFNSYTLDKLLLIVEFKNIQPVIIFTKSDLLSESS----- 56 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 + ++Y GY+V + S + ++ + + + ++S FAG SGVGK++++N L E Sbjct: 57 KIPNLYEKQGYKVFLTSINDKNSYEKISQIFENKLSAFAGWSGVGKTTIINHLTNNNYE- 115 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T IS G G+HTT ++ F G +ID+PG F +L+ E++++ F +F + Sbjct: 116 -TQQISKFLGRGKHTTRITQIIPFNKG-WLIDTPGFSIFE-HNLKKEEVSKAFFDFRIFA 172 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 C++R+C H+ + C +++ V + I ++R++NY RIL + Sbjct: 173 NECEFRNCFHNKEKKCKVKDEVSKNNILQSRYDNYLRILSEVEDE 217 >UniRef50_A4XB51 GTPase EngC n=105 Tax=Bacteria RepID=A4XB51_SALTO Length = 374 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 101/367 (27%), Positives = 149/367 (40%), Gaps = 40/367 (10%) Query: 2 SKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDV 61 ++ + R+ R +T + EG V + AD D Sbjct: 17 TRRREYDEDDVRIRPGRSSRPRTR------RRPRHADAVEGFVTAVDRGRYTCVLADADP 70 Query: 62 HRC-----NIRRTIR-SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG 115 + R R S+V GDRV G + + + R+SVL R D Sbjct: 71 KQAPVTAMRARELGRKSVVVGDRVGLVGDTSGTPGALAR--IVRIAGRSSVLRRTAEDDA 128 Query: 116 V-------KPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD 167 + + AN DQ+VIVSA+ P IDR LVA I P++ L K DL Sbjct: 129 TTAEGRLERVVVANADQLVIVSALADPPPRTGFIDRCLVAAYDAGIAPLLCLTKADLAGP 188 Query: 168 EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL 227 E E + Y + +++ + L L L GRIS+ G SGVGKS+L+N L Sbjct: 189 E------EVLGYYAELELPHVLICPDS--TLDGLRGLLAGRISVLVGHSGVGKSTLVNRL 240 Query: 228 LGLQKEILTNDISDNSGLGQHTTTAARLYHFP-----HGGDVIDSPGVREFGLWHLEPEQ 282 + +S G G+HT+T+ P G +ID+PG+R FGL H+ E Sbjct: 241 VPAATRT-VGQVS-AIGRGRHTSTSVVALQLPPVADSAEGWIIDTPGIRSFGLAHVSAES 298 Query: 283 ITQGFVEFHDYLGLCKYRDCKH-DTDPGCAIREAVEEGKIAETRFENYHRILESMA-QVK 340 + GF + + C +C H +P C + V G+ R +Y R+L S A + + Sbjct: 299 LLHGFPDLTEGAADCP-ANCPHTIGEPLCGLGVRVTAGQADPRRLASYRRLLASRAGENE 357 Query: 341 TRKNFSD 347 R S Sbjct: 358 PRTKPSS 364 >UniRef50_B5IIZ2 GTPase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIZ2_9CHRO Length = 379 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 139/316 (43%), Gaps = 38/316 (12%) Query: 41 EGIVISRFGMHADVESADGD---------VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGV 91 G+V++ +A V R + ++ ++ GDRV + Sbjct: 28 TGLVVAMQANYAMVGLDQPGPEARTRLLCTRRTRLAKSGLAICVGDRVRV----DGIDWR 83 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACET 150 +G V AVH R L RP AN+ +IV+V+++ P L + R+L+ E Sbjct: 84 AGRGAVAAVHPRHGRLERPA--------VANVSRIVVVASLAEPALDPLQLTRFLITAEA 135 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RI 209 ++VL+K DL+ ++ R GY + ++ + +GL+ L L+ I Sbjct: 136 CGSPVLLVLSKADLVPPAERDAWCRRV---RGWGYPPVALAVPSGEGLEALRRELSQPGI 192 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 ++ G SGVGKSSLLNAL+ + + +S G+HTT L+ V D+PG Sbjct: 193 AVLCGPSGVGKSSLLNALVP-ELALRVAAVSGRLQRGRHTTRHVELFGIGPQALVADTPG 251 Query: 270 VREFGLWHLEPEQITQGFVEFHDY---LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 L +PE + F E G C++ DC H +PGC++ E R+ Sbjct: 252 FNRPALP-RQPELLGPLFPEVRRQLARAGSCRFSDCLHRGEPGCSVGMDWE-------RW 303 Query: 327 ENYHRILESMAQVKTR 342 +Y + LE++ Q + R Sbjct: 304 PHYSQCLEAIEQEQHR 319 >UniRef50_B1V9R1 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Acholeplasmataceae RepID=RSGA_PHYAS Length = 310 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 82/321 (25%), Positives = 156/321 (48%), Gaps = 38/321 (11%) Query: 41 EGIVISRFGMHADVESADGD-VHRCNIRRTIR-----------------SLVTGDRVVWR 82 + +VI ++ D + + + ++ S+ GD V++ Sbjct: 3 KALVIRFLAGIYYIQDLDNQTILKAQKKGVLKKSNFIQDNQLKNNRDKMSIKVGDIVLYG 62 Query: 83 PGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNII 141 K ++ A+ R + L RP+ ANIDQ+++V ++ P ++ Sbjct: 63 MC-------YDKYLIYAILPRKNELKRPNI--------ANIDQVLLVFSLVKPHFQTLLL 107 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 D++L+ + +++ I+V +KIDL++ E + + + M+ Y Y V S Q G+ L Sbjct: 108 DKFLLILQQHKLDVILVFSKIDLIEKEELEEIQQNMNYYFPF-YTCYYVDSKQQIGIGVL 166 Query: 202 EEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 + +I++ AGQ+GVGKS+LL AL+ + T +IS++ G G+HTT A+LY + Sbjct: 167 KNIFEQKITVLAGQTGVGKSTLLKALIP-DANLKTQEISESLGRGKHTTKNAQLY-LFNN 224 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKY-RDCKHDTDPGCAIREAVEEGK 320 G + D+PG + L + + + +F Y+ C + +C H + C ++EA+ +GK Sbjct: 225 GFIADTPGFSKLDLGGFSYQNLKNFYPDFLKYVDNCYFGTNCLHLQETQCGVKEALTQGK 284 Query: 321 IAETRFENYHRILESMAQVKT 341 I +R+ NY +E + + K Sbjct: 285 IIPSRYSNYCYFMEEIKKEKK 305 >UniRef50_UPI0001C31887 GTPase EngC n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31887 Length = 348 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 37/337 (10%) Query: 16 ANHQRRLKTSKEKPDYDDNLFGEP--DEGIVISRFGMHADVESADG-DVHRCNIRRTIR- 71 R + + GEP V+S+ V D + + R +R Sbjct: 5 PAGIGRRDDLDAELATLRDALGEPGLSPARVLSQHSGVWLVAEPDAPEPRLVHARARLRD 64 Query: 72 ----SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV---KPIAANID 124 VTGD V G + V R + R +G + +AAN++ Sbjct: 65 EAEGPPVTGDWVALDGGDA----------IAGVLPRHGAVVRRAVGEGRAERQVLAANVE 114 Query: 125 QIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 + +V+ LPE + +R ++ +VL K D + + R++G Sbjct: 115 -LALVAEPLPEPNERRAERLAAIAGAGEVPVALVLTK----ADLDDDADATALRLGRDLG 169 Query: 185 YR-VLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 + VS T DG+ + L G ++ G SG GKS+L+NALLG +++ D+ + Sbjct: 170 LPDAIAVSVRTGDGIGIVRSLLPPGSTAVLLGPSGAGKSTLVNALLGEERQ-AVGDVRAS 228 Query: 243 SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDC 302 G+HTT L P+GG +ID+PG+RE G+W + F + + C++ DC Sbjct: 229 DKRGRHTTVTRELLSLPNGGLLIDTPGMREVGMWD---GGVDDTFDDVAELAAGCRFADC 285 Query: 303 KHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 +HD++P CA+R G +A R E + ++ A V Sbjct: 286 QHDSEPDCAVR-----GVVAPERLEAWRKLAREQAWV 317 >UniRef50_C1YSI8 Predicted GTPase n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YSI8_NOCDA Length = 387 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 79/274 (28%), Positives = 128/274 (46%), Gaps = 15/274 (5%) Query: 76 GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAIL 133 GD V R +VEAV ER+ L R + +AANID +++ A Sbjct: 83 GDWVAVRRS-------GDTWVVEAVLERSGSLVRQGVARDSHDQVLAANIDGVLVCEAAD 135 Query: 134 PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSH 193 ++ ++R+L P++ + K +L D + + G V VS+H Sbjct: 136 QGPNVGRLERFLSLAWASGATPVVAVTKAELAGDRLPEVLELVGSV--TAGADVHTVSAH 193 Query: 194 TQDGLKPLEE-ALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTA 252 T G++ L L G + G SG GKSSL+NA+ G K + T +I + TTT Sbjct: 194 TGLGVEELAARFLPGTTWVLLGTSGAGKSSLVNAVAGR-KLMDTGEIRHDRRGRH-TTTR 251 Query: 253 ARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAI 312 +L P G V+D PGVR + + + + F + D C++RDC+H ++PGCA+ Sbjct: 252 RQLLQLPGGALVLDIPGVRRIDVPG-DARGVDRTFADVSDLAEQCRFRDCRHGSEPGCAV 310 Query: 313 REAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 AV+EG++ R E ++R+ ++R + Sbjct: 311 TAAVDEGELDARRLERWNRLRRESEWNRSRGDAR 344 >UniRef50_D2NSB1 Predicted GTPase n=5 Tax=Actinomycetales RepID=D2NSB1_9MICC Length = 375 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 95/356 (26%), Positives = 158/356 (44%), Gaps = 47/356 (13%) Query: 1 MSKNKLSKGQQR--RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESA- 57 M+ S+ + RV N + +K++P + + + G ++ G + V Sbjct: 6 MNVRDFSEWDESDVRVRPNKKGSRPRTKDRPTFKEAIRGR----VITVDRGRWSVVVDEG 61 Query: 58 ---DGDVHRCNIRRTIRS-LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP--D 111 + + + R+ +VTGD V A+ + + + ERTS+L R D Sbjct: 62 TEKERTLIAARAKELRRTAIVTGDFVDLVGDTSGAK--DTLARIVRLGERTSILRRSADD 119 Query: 112 FYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGM 170 + + AN Q+VIV +A PE IDR +VA IEPI+ + K D + Sbjct: 120 TDPSERVVVANAQQLVIVVAAANPEPRTGFIDRAVVAAFDAGIEPILCITKTD------V 173 Query: 171 AFVNEQMDIYRNIGYRVLMVSSHTQ--------DGLK-----PLEEALTGRISIFAGQSG 217 + +D Y G ++++ SS GL+ L + L G++S+ G SG Sbjct: 174 RYPQNLLDYYAASGLKIVLSSSSDGLAPSQEGAAGLESAPVQELLQELLGQVSVLLGHSG 233 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY--------HFPHGGDVIDSPG 269 VGKS+L+NAL G ++ T ++ +G G+HT+++A G +ID+PG Sbjct: 234 VGKSTLVNALTGSER--ATGHVNAVTGRGRHTSSSALALRPVNANGDPMEPGTWIIDTPG 291 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD-PGCAIREAVEEGKIAET 324 +R FGL H+ PE + + FV+ C + C H P C + V G E+ Sbjct: 292 IRSFGLAHVPPETVVEAFVDLAPGAADCP-KACTHAAQAPECGLEAYVAAGHAGES 346 >UniRef50_A9RXD5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RXD5_PHYPA Length = 385 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 76/304 (25%), Positives = 144/304 (47%), Gaps = 53/304 (17%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ R ++ GD+V+ A + ++ +G+VE V +R S + +P Sbjct: 28 VVRAVLKKIKRRVLVGDKVLV----SAIDWMDRRGMVEDVLDRRSEIA--------EPPI 75 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN++ ++++ A P+L + R+LV E+ I ++LNK DL+ + + E++ Sbjct: 76 ANVEHLLVLFAFDRPKLEPIALSRFLVEAESTGIPFTLILNKADLVPQQELLDWKEKIA- 134 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ-------- 231 GY+ ++ S ++ G+ P+ E L + ++ G SGVGKSSL+NAL + Sbjct: 135 --GWGYKPVICSVRSRSGVAPVMEILRQKTAVVVGPSGVGKSSLINALRDVSGIEMWREK 192 Query: 232 ----------------KEILTNDISDNSGLGQHTTTAARLYHFPH-GGDVIDSPGVREFG 274 +++ +++S SG G+HTT L P GG + D+PG + Sbjct: 193 EAMQRLETVRDEHETFEKLQVSEVSLRSGKGRHTTRHVSLLRLPGDGGLLADTPGFSQPS 252 Query: 275 LWHLEPEQITQGFVEFHDYL-----GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 L + ++ F E + + G C + +C H +P CA+ + + R+ +Y Sbjct: 253 LNLVTSGELGDLFPEVREKIASSPEGGCLFANCLHAGEPSCAVGKDWD-------RYSHY 305 Query: 330 HRIL 333 +L Sbjct: 306 LGLL 309 >UniRef50_D1AV99 Ribosome small subunit-dependent GTPase A n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV99_STRM9 Length = 293 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 140/310 (45%), Gaps = 35/310 (11%) Query: 41 EGIVISRFGMHA---------DVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGV 91 EG VI + D++ + + +C +R ++ D + + Sbjct: 4 EGKVIRKIQGFYFVYTNYTFNDIDDFENKLIKCKLRGNLKIKNKKDNCIIGDNVLIDTEL 63 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACET 150 N I+ + ER + L RP + +NID + I A P + + L+ Sbjct: 64 N---IIIEILERKNFLNRP--------LISNIDNLAITFAAKEPNFDIIQFQKLLLNVHK 112 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGY-RVLMVSSHTQDGLKPLEEALTGRI 209 + P++++ K DL+ + +++ + N Y + +S + +E + + Sbjct: 113 NNLVPLLLITKFDLMSEVEKKEIDDILK--ENFPYLKYFFISHNE---YSEFKEYIYNKN 167 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 I +G SGVGKS+L+N +LG Q+ ++T DIS + G++TT R + + + G +ID+PG Sbjct: 168 IIISGPSGVGKSTLINNILG-QEILVTGDISQKTKKGKNTTVDTRFFPY-NNGFIIDTPG 225 Query: 270 VREFGLWHL-EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 + + I + F E ++ CK+ +C H +P C +++ K+ + R++ Sbjct: 226 FSSIEFPNFKDYLDIREYFPEINELSSECKFSNCIHIHEPNCNVKK-----KLNKLRYDF 280 Query: 329 YHRILESMAQ 338 Y I +++ + Sbjct: 281 YKLICQNIQE 290 >UniRef50_C2BSD9 GTP-binding protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BSD9_9ACTO Length = 352 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 90/370 (24%), Positives = 154/370 (41%), Gaps = 50/370 (13%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVE-SADG 59 MS+ + R + +K++P + + G+V++ V SA+ Sbjct: 1 MSRRDIGTDDPRVHVRPGKGSRPRTKKRPSFAHAV-----PGMVVAVDRGRFTVAISANC 55 Query: 60 DVHRCNIRRTIRS-LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP----DFYD 114 V R R ++ GD V + + + ER +VL R + Sbjct: 56 MVQAVKARALGRKGVIVGDWVGLEGDTSGT--PDTLARIVTLEERQTVLRRSFDESEVGA 113 Query: 115 GVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFV 173 K I AN Q++IV A PE +IDR +V+ ++ P++ + K DL V Sbjct: 114 REKLIVANATQMLIVVAARDPEPKRGMIDRAIVSALDAKVTPLLAVTKTDLDS------V 167 Query: 174 NEQMDIYRNIGYRVLMVSSHTQDG-----------------------LKPLEEALTGRIS 210 + Y +G +V ++ + + L+ L + L G ++ Sbjct: 168 PALIADYEAVGIKVFTLNRNLYEATAPVPSPVETHPSHLAPRPCAPRLQELHQQLQGEVT 227 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 + G SGVGKS+L+NAL+ T ++++ +G G+HT+T+A G +ID+PGV Sbjct: 228 VLLGHSGVGKSTLVNALVPG-ANRATGEVNEVTGKGRHTSTSAVALPIGSQGWLIDTPGV 286 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD-PGCAIREAVEEGKIAETRFENY 329 R FGL H++ + +GF E + C R C H D P C + E E R ++ Sbjct: 287 RSFGLAHVDAAGLLRGFTELYAIAQDCP-RGCAHAADAPDCLLDEHPE----LALRLASF 341 Query: 330 HRILESMAQV 339 +L + Sbjct: 342 RSLLSEVPSA 351 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A6TH78 Putative ribosome biogenesis GTPase rsgA n=304 T... 397 e-109 UniRef50_A8FRC7 Ribosome small subunit-dependent GTPase A n=9 Ta... 375 e-102 UniRef50_C9PQI0 Putative uncharacterized protein n=1 Tax=Pasteur... 373 e-102 UniRef50_C5BRI8 Ribosome small subunit-dependent GTPase A n=1 Ta... 343 7e-93 UniRef50_Q0VMD9 Putative ribosome biogenesis GTPase rsgA n=40 Ta... 342 1e-92 UniRef50_Q21H92 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 339 8e-92 UniRef50_C5D8S1 Putative ribosome biogenesis GTPase rsgA n=6 Tax... 324 3e-87 UniRef50_Q5ZRX8 EngC GTPase n=6 Tax=Legionella RepID=Q5ZRX8_LEGPH 323 6e-87 UniRef50_Q31HZ7 Ribosome small subunit-dependent GTPase A n=1 Ta... 322 9e-87 UniRef50_A4J589 Ribosome small subunit-dependent GTPase A n=3 Ta... 321 3e-86 UniRef50_B7H060 Ribosome small subunit-dependent GTPase A n=17 T... 319 1e-85 UniRef50_B8FYJ7 Ribosome small subunit-dependent GTPase A n=17 T... 318 1e-85 UniRef50_C9MMH3 Ribosome small subunit-dependent GTPase A n=7 Ta... 318 2e-85 UniRef50_D1KB75 GTPase n=1 Tax=uncultured SUP05 cluster bacteriu... 317 3e-85 UniRef50_Q0A8I5 Ribosome small subunit-dependent GTPase A n=1 Ta... 315 2e-84 UniRef50_Q8YK41 Putative ribosome biogenesis GTPase rsgA 2 n=3 T... 314 4e-84 UniRef50_A0LCF1 Ribosome small subunit-dependent GTPase A n=1 Ta... 313 7e-84 UniRef50_B8CXT2 Ribosome small subunit-dependent GTPase A n=2 Ta... 313 8e-84 UniRef50_B0NH56 Putative uncharacterized protein n=1 Tax=Clostri... 312 1e-83 UniRef50_C4ZEV1 Putative ribosome biogenesis GTPase rsgA n=12 Ta... 309 8e-83 UniRef50_A7Z4J8 Putative ribosome biogenesis GTPase rsgA n=31 Ta... 309 1e-82 UniRef50_C9R7Y8 Ribosome small subunit-dependent GTPase A n=1 Ta... 309 1e-82 UniRef50_A1AWN3 Ribosome small subunit-dependent GTPase A n=2 Ta... 308 1e-82 UniRef50_C0YJK5 GTP-binding protein n=1 Tax=Chryseobacterium gle... 307 5e-82 UniRef50_C5S7F8 Ribosome small subunit-dependent GTPase A n=1 Ta... 306 5e-82 UniRef50_B1YIP8 Ribosome small subunit-dependent GTPase A n=2 Ta... 306 6e-82 UniRef50_Q8R9T7 Putative ribosome biogenesis GTPase rsgA n=16 Ta... 306 6e-82 UniRef50_Q88WF3 Putative ribosome biogenesis GTPase rsgA 2 n=3 T... 306 7e-82 UniRef50_B4RG68 Ribosome-associated GTPase n=2 Tax=Caulobacterac... 305 1e-81 UniRef50_C1ABL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 305 1e-81 UniRef50_B0SZL3 Ribosome small subunit-dependent GTPase A n=1 Ta... 305 1e-81 UniRef50_Q3AC25 Putative ribosome biogenesis GTPase rsgA n=9 Tax... 304 2e-81 UniRef50_C9KJ38 Ribosome small subunit-dependent GTPase A n=1 Ta... 304 3e-81 UniRef50_D1ALR3 Ribosome small subunit-dependent GTPase A n=10 T... 304 3e-81 UniRef50_A1HMW6 Ribosome small subunit-dependent GTPase A n=1 Ta... 304 3e-81 UniRef50_A0Z0P9 Ribosome-associated GTPase n=1 Tax=marine gamma ... 304 3e-81 UniRef50_C7R8R7 Sigma 54 interacting domain protein n=1 Tax=Kang... 304 3e-81 UniRef50_A6TRW0 Putative ribosome biogenesis GTPase rsgA n=15 Ta... 304 3e-81 UniRef50_C6D8C7 Ribosome small subunit-dependent GTPase A n=2 Ta... 304 4e-81 UniRef50_C3J9M6 Ribosome small subunit-dependent GTPase A n=3 Ta... 303 5e-81 UniRef50_A8FD43 Putative ribosome biogenesis GTPase rsgA n=131 T... 303 6e-81 UniRef50_Q82LC4 Putative ribosome biogenesis GTPase rsgA n=23 Ta... 303 8e-81 UniRef50_A3I6Q8 Ribosome-associated GTPase n=1 Tax=Bacillus sp. ... 302 1e-80 UniRef50_D2MKL2 GTPase EngC n=1 Tax=Candidatus Poribacteria sp. ... 301 2e-80 UniRef50_B2RLV5 Putative ribosome biogenesis GTPase rsgA n=28 Ta... 301 2e-80 UniRef50_Q60BE0 Putative uncharacterized protein n=1 Tax=Methylo... 301 2e-80 UniRef50_Q71YJ7 Putative ribosome biogenesis GTPase rsgA 1 n=23 ... 301 3e-80 UniRef50_B0VIG3 Putative GTPase YjeQ n=1 Tax=Candidatus Cloacamo... 300 4e-80 UniRef50_B5JX14 Ribosome small subunit-dependent GTPase A n=1 Ta... 300 4e-80 UniRef50_C7IKW3 Ribosome small subunit-dependent GTPase A n=1 Ta... 300 6e-80 UniRef50_D1R990 Putative uncharacterized protein n=1 Tax=Parachl... 299 1e-79 UniRef50_D2RNU7 Ribosome small subunit-dependent GTPase A n=2 Ta... 299 1e-79 UniRef50_Q71ZZ0 Putative ribosome biogenesis GTPase rsgA 2 n=21 ... 299 1e-79 UniRef50_Q65LI5 GTP-binding protein n=1 Tax=Bacillus licheniform... 299 1e-79 UniRef50_Q11RI7 Putative ribosome biogenesis GTPase rsgA n=3 Tax... 299 1e-79 UniRef50_A6GW90 Putative ribosome biogenesis GTPase rsgA n=25 Ta... 299 1e-79 UniRef50_B8GPJ8 Ribosome-associated GTPase n=1 Tax=Thioalkalivib... 297 4e-79 UniRef50_Q07I14 Ribosome small subunit-dependent GTPase A n=8 Ta... 296 6e-79 UniRef50_Q6MEY3 Putative uncharacterized protein n=1 Tax=Candida... 296 7e-79 UniRef50_D1YX46 Probable GTPase EngC n=2 Tax=Euryarchaeota RepID... 296 8e-79 UniRef50_B3QL20 Putative ribosome biogenesis GTPase rsgA n=11 Ta... 296 9e-79 UniRef50_A1KRU2 Putative ribosome biogenesis GTPase rsgA n=29 Ta... 295 1e-78 UniRef50_D1BMC8 Ribosome small subunit-dependent GTPase A n=3 Ta... 295 2e-78 UniRef50_Q3A0G9 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 295 2e-78 UniRef50_B1YJQ5 Ribosome small subunit-dependent GTPase A n=67 T... 294 2e-78 UniRef50_B3EBY9 Ribosome small subunit-dependent GTPase A n=1 Ta... 294 2e-78 UniRef50_D2R982 Ribosome small subunit-dependent GTPase A n=1 Ta... 294 3e-78 UniRef50_B3QWC8 Ribosome small subunit-dependent GTPase A n=1 Ta... 294 3e-78 UniRef50_B1ZUH7 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 294 4e-78 UniRef50_C6X5X0 Ribosome small subunit-stimulated GTPase EngC n=... 293 4e-78 UniRef50_C6PE63 Ribosome small subunit-dependent GTPase A n=1 Ta... 293 5e-78 UniRef50_C4L300 Ribosome small subunit-dependent GTPase A n=1 Ta... 293 7e-78 UniRef50_C5CF78 Ribosome small subunit-dependent GTPase A n=1 Ta... 292 1e-77 UniRef50_C6WWG3 Ribosome small subunit-dependent GTPase A n=4 Ta... 291 2e-77 UniRef50_C9RJ19 Ribosome small subunit-dependent GTPase A n=1 Ta... 291 2e-77 UniRef50_A1ZFA4 Ribosome small subunit-dependent GTPase A n=1 Ta... 291 3e-77 UniRef50_B1KX53 Putative ribosome biogenesis GTPase rsgA n=32 Ta... 291 3e-77 UniRef50_C9LUJ5 Ribosome small subunit-dependent GTPase A n=2 Ta... 290 4e-77 UniRef50_B0K1Y6 Ribosome small subunit-dependent GTPase A n=14 T... 290 5e-77 UniRef50_B9K7Z8 Putative ribosome biogenesis GTPase rsgA n=7 Tax... 290 6e-77 UniRef50_B2JF36 Putative ribosome biogenesis GTPase rsgA n=56 Ta... 289 7e-77 UniRef50_Q8TKG2 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 289 7e-77 UniRef50_A9KMS1 Ribosome small subunit-dependent GTPase A n=4 Ta... 289 8e-77 UniRef50_Q2YB53 Putative ribosome biogenesis GTPase rsgA n=6 Tax... 289 9e-77 UniRef50_A9WK24 Ribosome small subunit-dependent GTPase A n=6 Ta... 289 1e-76 UniRef50_A5WDM1 Ribosome small subunit-dependent GTPase A n=4 Ta... 288 2e-76 UniRef50_Q03FX9 Putative ribosome biogenesis GTPase rsgA n=25 Ta... 288 2e-76 UniRef50_A5EV96 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 288 3e-76 UniRef50_Q8ETB7 Putative ribosome biogenesis GTPase rsgA 1 n=1 T... 287 4e-76 UniRef50_Q6ANG3 Putative uncharacterized protein n=1 Tax=Desulfo... 287 5e-76 UniRef50_A7HNP9 Ribosome small subunit-dependent GTPase A n=5 Ta... 286 6e-76 UniRef50_C4ZNY5 Ribosome small subunit-dependent GTPase A n=3 Ta... 286 6e-76 UniRef50_C6W757 Ribosome small subunit-dependent GTPase A n=1 Ta... 286 8e-76 UniRef50_A1R8G6 Ribosome small subunit-dependent GTPase A n=3 Ta... 286 1e-75 UniRef50_UPI0001789FEF GTPase EngC n=1 Tax=Geobacillus sp. Y412M... 285 2e-75 UniRef50_Q67PQ4 Putative GTPase n=1 Tax=Symbiobacterium thermoph... 285 2e-75 UniRef50_D2QSL3 Ribosome small subunit-dependent GTPase A n=2 Ta... 284 4e-75 UniRef50_Q08XU7 Ribosome small subunit-dependent GTPase A n=2 Ta... 283 7e-75 UniRef50_Q39XI8 GTPase EngC n=2 Tax=Geobacter RepID=Q39XI8_GEOMG 283 8e-75 UniRef50_Q7UUZ6 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 283 8e-75 UniRef50_Q02DD4 Ribosome small subunit-dependent GTPase A n=1 Ta... 283 9e-75 UniRef50_B8CWT4 Ribosome small subunit-dependent GTPase A n=1 Ta... 283 9e-75 UniRef50_Q0F2Y7 GTP-binding protein, putative n=1 Tax=Mariprofun... 283 1e-74 UniRef50_D1T763 Ribosome small subunit-dependent GTPase A n=2 Ta... 282 1e-74 UniRef50_A8MGJ8 GTPase EngC n=6 Tax=Bacteria RepID=A8MGJ8_ALKOO 282 1e-74 UniRef50_Q7MGA2 Putative ribosome biogenesis GTPase rsgA 2 n=38 ... 282 1e-74 UniRef50_Q2S3I5 Ribosome small subunit-dependent GTPase A n=2 Ta... 282 1e-74 UniRef50_C4FT82 Putative uncharacterized protein n=1 Tax=Catonel... 281 2e-74 UniRef50_Q0AXM1 GTPase EngC n=1 Tax=Syntrophomonas wolfei subsp.... 281 2e-74 UniRef50_A8RUS7 Putative uncharacterized protein n=2 Tax=Clostri... 281 3e-74 UniRef50_D2UC76 Probable gtpase engc protein n=1 Tax=Xanthomonas... 280 6e-74 UniRef50_C8WGD6 GTPase EngC n=1 Tax=Eggerthella lenta DSM 2243 R... 280 6e-74 UniRef50_B6YS07 Putative ribosome biogenesis GTPase rsgA n=16 Ta... 279 9e-74 UniRef50_A4ASQ1 Ribosome-associated GTPase n=1 Tax=Flavobacteria... 279 1e-73 UniRef50_Q038H7 Predicted GTPase n=8 Tax=Lactobacillus RepID=Q03... 279 1e-73 UniRef50_C1ZE03 Ribosome small subunit-dependent GTPase A n=2 Ta... 278 1e-73 UniRef50_C9LLK1 Ribosome small subunit-dependent GTPase A n=1 Ta... 278 2e-73 UniRef50_B8FMP2 GTPase EngC n=1 Tax=Desulfatibacillum alkenivora... 278 2e-73 UniRef50_B3QS55 Ribosome small subunit-dependent GTPase A n=1 Ta... 278 2e-73 UniRef50_C5CSN3 Putative ribosome biogenesis GTPase rsgA n=29 Ta... 278 2e-73 UniRef50_B8I262 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 278 3e-73 UniRef50_Q8EZ61 Putative ribosome biogenesis GTPase rsgA n=3 Tax... 278 3e-73 UniRef50_Q729X9 GTP-binding protein, putative n=4 Tax=Desulfovib... 277 3e-73 UniRef50_A3ZVZ2 Putative uncharacterized protein n=2 Tax=Plancto... 277 3e-73 UniRef50_C0A6W9 Ribosome small subunit-dependent GTPase A n=1 Ta... 277 5e-73 UniRef50_Q6MJR6 Putative GTPase n=1 Tax=Bdellovibrio bacteriovor... 276 8e-73 UniRef50_B1C5S8 Putative uncharacterized protein n=1 Tax=Anaerof... 276 1e-72 UniRef50_A8LW34 Ribosome small subunit-dependent GTPase A n=3 Ta... 275 1e-72 UniRef50_B2GD51 Putative ribosome biogenesis GTPase rsgA n=57 Ta... 274 2e-72 UniRef50_C6BVN5 Ribosome small subunit-dependent GTPase A n=2 Ta... 274 2e-72 UniRef50_C5NY56 Ribosome small subunit-dependent GTPase A n=1 Ta... 274 2e-72 UniRef50_D0L125 Ribosome small subunit-dependent GTPase A n=1 Ta... 274 3e-72 UniRef50_Q5HPX0 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 274 3e-72 UniRef50_C8WW82 Ribosome small subunit-dependent GTPase A n=2 Ta... 274 3e-72 UniRef50_Q73MQ9 GTPase YjeQ n=1 Tax=Treponema denticola RepID=Q7... 274 4e-72 UniRef50_B2UNU0 GTPase EngC n=3 Tax=Verrucomicrobiales RepID=B2U... 274 4e-72 UniRef50_B2SLQ8 Putative ribosome biogenesis GTPase rsgA n=19 Ta... 273 5e-72 UniRef50_B8DLQ8 GTPase EngC n=1 Tax=Desulfovibrio vulgaris str. ... 273 6e-72 UniRef50_A6WF06 GTPase EngC n=8 Tax=Actinomycetales RepID=A6WF06... 273 6e-72 UniRef50_Q1WUA8 GTPase n=2 Tax=Lactobacillus salivarius RepID=Q1... 273 9e-72 UniRef50_Q8A8H7 Putative ribosome biogenesis GTPase rsgA 1 n=9 T... 271 2e-71 UniRef50_A6CYS2 Ribosome-associated GTPase n=2 Tax=Vibrionaceae ... 271 3e-71 UniRef50_C5BLQ5 Putative GTPase EngC protein 2 n=1 Tax=Teredinib... 271 4e-71 UniRef50_A0Q5F4 GTPase n=18 Tax=Francisella RepID=A0Q5F4_FRATN 270 4e-71 UniRef50_C8ZYN3 Ribosome-associated GTPase n=4 Tax=Enterococcus ... 270 6e-71 UniRef50_Q03RY0 Predicted GTPase n=1 Tax=Lactobacillus brevis AT... 270 6e-71 UniRef50_D2S5Q8 Ribosome small subunit-dependent GTPase A n=1 Ta... 269 1e-70 UniRef50_A9EN60 Putative uncharacterized protein n=1 Tax=Sorangi... 268 2e-70 UniRef50_C0R0A9 Ribosome-associated GTPase n=2 Tax=Brachyspira R... 268 2e-70 UniRef50_Q6GHL4 Putative ribosome biogenesis GTPase rsgA n=58 Ta... 268 2e-70 UniRef50_D1VSD9 Ribosome small subunit-dependent GTPase A n=1 Ta... 268 3e-70 UniRef50_B9L2Y7 Ribosome small subunit-dependent GTPase A n=2 Ta... 268 3e-70 UniRef50_C5C2S6 GTPase EngC n=1 Tax=Beutenbergia cavernae DSM 12... 267 5e-70 UniRef50_A4XL75 Ribosome small subunit-dependent GTPase A n=2 Ta... 267 6e-70 UniRef50_D1BG37 Predicted GTPase n=1 Tax=Sanguibacter keddieii D... 266 8e-70 UniRef50_Q14LR6 Conserved hypothetical duf258 gtpase protein n=1... 266 8e-70 UniRef50_C7RGU6 Ribosome small subunit-dependent GTPase A n=4 Ta... 266 1e-69 UniRef50_C7H5I2 Ribosome small subunit-dependent GTPase A n=8 Ta... 266 1e-69 UniRef50_A6DJW3 Ribosome-associated GTPase n=1 Tax=Lentisphaera ... 266 1e-69 UniRef50_Q2JW76 Ribosome small subunit-dependent GTPase A n=2 Ta... 264 4e-69 UniRef50_B5JHE4 Putative uncharacterized protein n=1 Tax=Verruco... 263 5e-69 UniRef50_D0LVG1 Ribosome small subunit-dependent GTPase A n=1 Ta... 263 6e-69 UniRef50_B9NLX8 Ribosome small subunit-dependent GTPase A n=2 Ta... 263 6e-69 UniRef50_D2B3W4 Ribosome-associated GTPase n=1 Tax=Streptosporan... 262 1e-68 UniRef50_B0MPP3 Putative uncharacterized protein n=1 Tax=Eubacte... 261 2e-68 UniRef50_C4G9D9 Putative uncharacterized protein n=1 Tax=Shuttle... 261 2e-68 UniRef50_C4V0Q2 Ribosome-associated GTP-binding protein n=1 Tax=... 261 3e-68 UniRef50_Q30WI2 GTPase n=2 Tax=Deltaproteobacteria RepID=Q30WI2_... 261 3e-68 UniRef50_D2AX52 Ribosome-associated GTPase n=3 Tax=Actinomycetal... 261 4e-68 UniRef50_C6BWU3 GTPase EngC n=1 Tax=Desulfovibrio salexigens DSM... 261 4e-68 UniRef50_O66555 Putative ribosome biogenesis GTPase rsgA n=7 Tax... 260 4e-68 UniRef50_B3EHA2 GTPase EngC n=4 Tax=Bacteria RepID=B3EHA2_CHLL2 260 6e-68 UniRef50_C7HYF6 Ribosome small subunit-dependent GTPase A n=1 Ta... 259 1e-67 UniRef50_C8PML9 Ribosome small subunit-dependent GTPase A n=1 Ta... 259 1e-67 UniRef50_Q2SSL6 Ribosome small subunit-dependent GTPase A n=4 Ta... 259 1e-67 UniRef50_Q8YUA3 Putative ribosome biogenesis GTPase rsgA 1 n=19 ... 259 1e-67 UniRef50_B0JW21 Putative ribosome biogenesis GTPase rsgA n=8 Tax... 259 1e-67 UniRef50_C8NZ87 Ribosome small subunit-dependent GTPase A n=4 Ta... 258 2e-67 UniRef50_A6GEV4 Ribosome-associated GTPase n=2 Tax=Deltaproteoba... 257 4e-67 UniRef50_Q2BLA6 GTPase n=1 Tax=Neptuniibacter caesariensis RepID... 257 5e-67 UniRef50_D1AJL1 Ribosome small subunit-dependent GTPase A n=2 Ta... 256 9e-67 UniRef50_A6GTD7 Ribosome small subunit-dependent GTPase A n=1 Ta... 256 1e-66 UniRef50_Q044G6 Putative ribosome biogenesis GTPase rsgA n=27 Ta... 255 2e-66 UniRef50_A5IY02 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 255 2e-66 UniRef50_Q98JM4 Putative ribosome biogenesis GTPase rsgA n=14 Ta... 255 2e-66 UniRef50_C1CZT1 Putative GTPase engC protein 2 n=1 Tax=Deinococc... 254 2e-66 UniRef50_A0L4L3 GTPase EngC n=1 Tax=Magnetococcus sp. MC-1 RepID... 254 2e-66 UniRef50_Q1K3F8 GTPase EngC n=1 Tax=Desulfuromonas acetoxidans D... 254 3e-66 UniRef50_C2HH17 GTP-binding protein n=2 Tax=Finegoldia magna Rep... 254 3e-66 UniRef50_C6XMF8 GTPase EngC n=16 Tax=Alphaproteobacteria RepID=C... 253 7e-66 UniRef50_C7QYQ8 GTPase EngC n=1 Tax=Jonesia denitrificans DSM 20... 252 9e-66 UniRef50_A4XCG5 GTPase EngC n=1 Tax=Salinispora tropica CNB-440 ... 252 1e-65 UniRef50_D0J0X0 Ribosome small subunit-dependent GTPase A n=10 T... 252 1e-65 UniRef50_A1AQR2 Ribosome small subunit-dependent GTPase A n=4 Ta... 251 3e-65 UniRef50_A4SW79 Ribosome small subunit-dependent GTPase A n=2 Ta... 251 3e-65 UniRef50_C0VZX3 Possible GTP-binding protein n=1 Tax=Actinomyces... 250 4e-65 UniRef50_Q8R685 Putative ribosome biogenesis GTPase rsgA n=15 Ta... 249 1e-64 UniRef50_C4DFS4 Predicted GTPase n=2 Tax=Actinomycetales RepID=C... 249 1e-64 UniRef50_D0LXL5 GTPase EngC n=1 Tax=Haliangium ochraceum DSM 143... 248 2e-64 UniRef50_Q114R1 Ribosome small subunit-dependent GTPase A n=2 Ta... 248 2e-64 UniRef50_D2MQI0 Ribosome small subunit-dependent GTPase A n=1 Ta... 248 3e-64 UniRef50_B3PN77 GTPase YjeQ/EngC n=1 Tax=Mycoplasma arthritidis ... 247 3e-64 UniRef50_B8HA01 GTPase EngC n=1 Tax=Arthrobacter chlorophenolicu... 247 4e-64 UniRef50_C7MLK1 Predicted GTPase n=4 Tax=Coriobacteriaceae RepID... 247 4e-64 UniRef50_Q7VEJ4 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 247 5e-64 UniRef50_A6W235 GTPase EngC n=2 Tax=cellular organisms RepID=A6W... 247 6e-64 UniRef50_B2A2K9 Ribosome small subunit-dependent GTPase A n=1 Ta... 246 1e-63 UniRef50_Q28KH3 GTPase EngC n=5 Tax=Rhodobacteraceae RepID=Q28KH... 245 1e-63 UniRef50_D2NNY6 Predicted GTPase n=2 Tax=Rothia mucilaginosa Rep... 245 1e-63 UniRef50_B5W2A4 GTPase EngC n=2 Tax=Arthrospira RepID=B5W2A4_SPIMA 245 2e-63 UniRef50_A6GEY2 Probable GTPase n=1 Tax=Plesiocystis pacifica SI... 244 2e-63 UniRef50_A8SM04 Putative uncharacterized protein n=1 Tax=Parvimo... 244 3e-63 UniRef50_D1J8S7 Probable GTPase engC n=1 Tax=Mycoplasma hominis ... 244 3e-63 UniRef50_B9ZJR5 Ribosome small subunit-dependent GTPase A n=1 Ta... 244 4e-63 UniRef50_B4UM25 Ribosome small subunit-dependent GTPase A n=4 Ta... 243 7e-63 UniRef50_Q7NDG7 Glr4268 protein n=1 Tax=Gloeobacter violaceus Re... 242 1e-62 UniRef50_C4FBQ3 Putative uncharacterized protein n=2 Tax=Collins... 242 1e-62 UniRef50_Q6XR83 Uvs038 n=3 Tax=cellular organisms RepID=Q6XR83_9... 242 2e-62 UniRef50_B6W6J9 Putative uncharacterized protein n=1 Tax=Anaeroc... 242 2e-62 UniRef50_Q04XB7 GTPase n=6 Tax=Leptospira RepID=Q04XB7_LEPBL 239 8e-62 UniRef50_C7NDT0 Ribosome small subunit-dependent GTPase A n=2 Ta... 238 2e-61 UniRef50_B1AIK5 Putative ribosome biogenesis GTPase rsgA n=15 Ta... 238 2e-61 UniRef50_B9RMG0 GTP binding protein, putative n=1 Tax=Ricinus co... 238 2e-61 UniRef50_Q73J49 GTPase YjeQ, putative n=1 Tax=Treponema denticol... 237 4e-61 UniRef50_A4S3D3 Predicted protein n=3 Tax=Mamiellales RepID=A4S3... 236 8e-61 UniRef50_UPI0001982B97 PREDICTED: hypothetical protein isoform 4... 235 2e-60 UniRef50_Q8EUL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 235 2e-60 UniRef50_Q46I43 Putative ribosome biogenesis GTPase rsgA n=2 Tax... 234 3e-60 UniRef50_A4E9Q8 Putative uncharacterized protein n=2 Tax=Collins... 234 3e-60 UniRef50_B9HDG9 Predicted protein (Fragment) n=1 Tax=Populus tri... 234 5e-60 UniRef50_A3V5J3 Putative uncharacterized protein n=1 Tax=Loktane... 232 2e-59 UniRef50_C8W7M5 GTPase EngC n=1 Tax=Atopobium parvulum DSM 20469... 232 2e-59 UniRef50_B5IIZ2 GTPase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5II... 231 3e-59 UniRef50_B5Y7I4 Ribosome small subunit-dependent GTPase A n=1 Ta... 231 5e-59 UniRef50_Q601H2 Putative ribosome biogenesis GTPase rsgA n=4 Tax... 230 6e-59 UniRef50_Q4A6T0 Putative ATP/GTP-binding protein n=1 Tax=Mycopla... 230 7e-59 UniRef50_B5RLH3 Putative ribosome biogenesis GTPase rsgA n=22 Ta... 229 1e-58 UniRef50_O64802 T1F15.10 protein n=14 Tax=Magnoliophyta RepID=O6... 229 1e-58 UniRef50_A0JYB3 GTPase EngC n=8 Tax=Micrococcineae RepID=A0JYB3_... 226 7e-58 UniRef50_B9CMV6 Ribosome-associated GTPase n=1 Tax=Atopobium rim... 226 8e-58 UniRef50_A3CQN2 GTPase, putative n=3 Tax=Streptococcus RepID=A3C... 226 1e-57 UniRef50_A4XB51 GTPase EngC n=105 Tax=Bacteria RepID=A4XB51_SALTO 224 3e-57 UniRef50_Q98PN8 Putative ribosome biogenesis GTPase rsgA n=1 Tax... 222 1e-56 UniRef50_UPI0001C31887 GTPase EngC n=1 Tax=Conexibacter woesei D... 222 2e-56 UniRef50_C1YSI8 Predicted GTPase n=1 Tax=Nocardiopsis dassonvill... 221 3e-56 UniRef50_C2BSD9 GTP-binding protein n=1 Tax=Mobiluncus curtisii ... 220 7e-56 UniRef50_B1V9R1 Putative ribosome biogenesis GTPase rsgA n=5 Tax... 219 9e-56 UniRef50_Q6KH84 Predicted GTPase protein n=1 Tax=Mycoplasma mobi... 215 2e-54 UniRef50_A2C5M0 Putative ribosome biogenesis GTPase rsgA n=14 Ta... 214 3e-54 UniRef50_A9RXD5 Predicted protein n=1 Tax=Physcomitrella patens ... 214 5e-54 Sequences not found previously or not previously below threshold: >UniRef50_A6TH78 Putative ribosome biogenesis GTPase rsgA n=304 Tax=Proteobacteria RepID=RSGA_KLEP7 Length = 353 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 312/353 (88%), Positives = 327/353 (92%), Gaps = 3/353 (0%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MSKNKLSKGQQRRV ANHQRRLKT+ EK DYDDNLFGE EGIVISRFGMHADVESADG Sbjct: 1 MSKNKLSKGQQRRVKANHQRRLKTTAEKADYDDNLFGETSEGIVISRFGMHADVESADGS 60 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 VHRCNIRRTIRSLVTGDRVVWRPGK AA+GV+VKGIVEAVH+R SVLTRPDFYDGVKPIA Sbjct: 61 VHRCNIRRTIRSLVTGDRVVWRPGKDAADGVSVKGIVEAVHDRASVLTRPDFYDGVKPIA 120 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANIDQIV+VSAILPELSLNIIDRYLVACE IEP+IVLNKIDLLDD+G+ FVNEQMDIY Sbjct: 121 ANIDQIVVVSAILPELSLNIIDRYLVACEAQDIEPLIVLNKIDLLDDDGLRFVNEQMDIY 180 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLG-LQKEILTNDI 239 RNIGYRVL+VSS TQDGLKPLE ALT RISIFAGQSGVGKSSLLNALLG + +ILTND+ Sbjct: 181 RNIGYRVLLVSSRTQDGLKPLEAALTDRISIFAGQSGVGKSSLLNALLGLSEDQILTNDV 240 Query: 240 SDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKY 299 SD SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE EQIT GFVEFHDYLG CKY Sbjct: 241 SDVSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEAEQITNGFVEFHDYLGRCKY 300 Query: 300 RDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA--QVKTRKNFSDTDD 350 RDCKHDTDPGCA+REAVE GKIAE+RFENYHRILESMA QVKTRKNFS +DD Sbjct: 301 RDCKHDTDPGCALREAVENGKIAESRFENYHRILESMAQVQVKTRKNFSSSDD 353 >UniRef50_A8FRC7 Ribosome small subunit-dependent GTPase A n=9 Tax=Gammaproteobacteria RepID=A8FRC7_SHESH Length = 352 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 189/354 (53%), Positives = 245/354 (69%), Gaps = 7/354 (1%) Query: 1 MSKNK-LSKGQQRRVNANHQRRLKTSK---EKPDYDDNLFGEPDEGIVISRFGMHADVES 56 MSK K LS+GQ+RR+ AN ++RL+ + D+ G G VISRFG HAD+E+ Sbjct: 1 MSKKKPLSQGQRRRMRANQEKRLQRKDSGSNASELQDSSLGPEQLGTVISRFGQHADIET 60 Query: 57 ADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV 116 G + RCNIRR I+SLVTGD+VV R K G+ G+VEAVH R S L+RPD YDG+ Sbjct: 61 ESGQLARCNIRRNIQSLVTGDKVVARLAKDIETGIA--GVVEAVHPRHSSLSRPDMYDGI 118 Query: 117 KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 K IAANIDQI+IVS+++P + IIDRYLVA E I PII+LNKIDLL DE V Sbjct: 119 KIIAANIDQILIVSSVVPSFTTQIIDRYLVAAEDTGISPIIILNKIDLLTDEERPEVEAA 178 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 ++ YR+IGY V VSS + G++ +++ L +S+F GQSGVGKSSL+NA++ E+ Sbjct: 179 LERYRDIGYPVYQVSSKSGLGVEGIKDLLNENVSVFVGQSGVGKSSLINAMMP-DAELQI 237 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 D+S+NSGLGQHTTT A+L HF GGD++DSPGVREF LWHL E++ F+EF DYLG Sbjct: 238 GDVSENSGLGQHTTTTAKLLHFASGGDLVDSPGVREFALWHLPAERVGWCFIEFRDYLGT 297 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 CK+RDCKH DPGCAI A +GKIAE R+ NYH+I+ S+ + + ++F D Sbjct: 298 CKFRDCKHKNDPGCAITAAFNDGKIAEDRYNNYHKIIASLDEQRHARHFRSGSD 351 >UniRef50_C9PQI0 Putative uncharacterized protein n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PQI0_9PAST Length = 354 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 188/350 (53%), Positives = 262/350 (74%), Gaps = 7/350 (2%) Query: 1 MSKNKLSKGQQRRVNANHQRRL----KTSKEKPDYDDNLFGEPDEGIVISRFGMHADVES 56 +SK KL++ Q+RR+ +N+++ L + K++ ++ D++ GE +GIV++R+ +HADVE+ Sbjct: 6 LSKRKLTQNQKRRIQSNNEKALHRHQRREKKEIEWQDDMLGESQDGIVVTRYSVHADVEN 65 Query: 57 ADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV 116 A G++ RCN+RRT+ SLV GDRVVWR G +GV+ G++EA+ R + +TRPD+YDG+ Sbjct: 66 AQGEIFRCNLRRTLSSLVVGDRVVWRQGNQQLQGVS--GVIEAIKPRQNEITRPDYYDGL 123 Query: 117 KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 K IAANID+I+IVSA+LP LSLNIIDRYLV CET I +IV+NK+DLL DE V EQ Sbjct: 124 KVIAANIDRIIIVSAVLPTLSLNIIDRYLVICETANIPAVIVVNKVDLLTDEARKEVEEQ 183 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 + IY IGY+ +M+S+ + + ++ L SI GQSGVGKSSL+N +L + Sbjct: 184 LKIYEKIGYQTMMISAMSGENMEKLTALFNNSTSILVGQSGVGKSSLINHILP-EVNAHV 242 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 DIS+NSGLGQHTTT++RLYH GG++IDSPG+REFGLWHLE +QIT+G+ EF +LG Sbjct: 243 GDISENSGLGQHTTTSSRLYHLNQGGNLIDSPGIREFGLWHLEQDQITKGYREFQYFLGT 302 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 CK+RDCKH DPGCA+REAVE+GKI RF+NYHR++ S+ + K+++ FS Sbjct: 303 CKFRDCKHLNDPGCALREAVEQGKIHSVRFDNYHRLIASLNETKSQRYFS 352 >UniRef50_C5BRI8 Ribosome small subunit-dependent GTPase A n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRI8_TERTT Length = 328 Score = 343 bits (879), Expect = 7e-93, Method: Composition-based stats. Identities = 148/342 (43%), Positives = 208/342 (60%), Gaps = 17/342 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 M+K KL++ Q RR+ + +T++ G+VISR+G ADVE+A G+ Sbjct: 1 MAKRKLTQQQSRRIAKQQKALRQTTE---------LENVLPGLVISRYGKQADVETASGE 51 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 ++RC++RR + LVTGDRV + ++ +V + L RPD Y +K I Sbjct: 52 LYRCHLRRNLGDLVTGDRVALQLEDEG-------AVIVSVEPAKNRLQRPDSYGKLKAIG 104 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANIDQ+VIV A PE N+IDRYLV E L ++P++++NK DL+ + E +Y Sbjct: 105 ANIDQMVIVIAPQPEAHPNLIDRYLVVAENLDVQPLLLVNKSDLIAPSSHETLTEIAQLY 164 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 ++ Y +L VS+ G+ LE L R SIF GQSGVGKSSLL LL + ++ D+S Sbjct: 165 SSLHYPILHVSAKADMGMAALEAQLANRTSIFVGQSGVGKSSLLQNLLPGE-DLKIGDLS 223 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 + G G+HTTT ARLYHF GG+ IDSPG+REFGLWH + Q+ GFVE Y G CK+ Sbjct: 224 EQVGKGKHTTTYARLYHFSSGGNCIDSPGIREFGLWHFDKTQLLNGFVELRQYGGSCKFS 283 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 DC H+ DPGCAIREAV+ G+I R+E++ RI ++ V+ + Sbjct: 284 DCSHNNDPGCAIREAVDAGEIQPQRYESFLRIAATLDDVQVK 325 >UniRef50_Q0VMD9 Putative ribosome biogenesis GTPase rsgA n=40 Tax=Bacteria RepID=RSGA_ALCBS Length = 352 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 149/357 (41%), Positives = 221/357 (61%), Gaps = 16/357 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDD----NLFGEPDEGIVISRFGMHADVES 56 M+K KL++ Q+ R+ + + + D + + G+ G++ + FG +VES Sbjct: 1 MAKRKLNRRQRWRIEKIQAEKRDRANRRTDQQEILVADDLGDEQHGVITAHFGQQVEVES 60 Query: 57 ADG------DVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP 110 ADG RC+ R T+ LV GD+V+W+P K G+V A+ R +VL RP Sbjct: 61 ADGPGAENRTTRRCHFRATLEQLVVGDKVIWQPPKS-----EGLGVVVAIEPRDTVLKRP 115 Query: 111 DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGM 170 D Y +KP+AAN++Q+++V A LP S +++DRYLVA E I +VLNK DL+DD Sbjct: 116 DMYGNLKPVAANVEQMLVVFAPLPTPSSSLLDRYLVAAELSGIAATLVLNKADLIDDTLR 175 Query: 171 AFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGL 230 FV+E D+YR++GY VL V +H ++GL PL EAL G+ S+F GQSGVGKSSL+N +L Sbjct: 176 PFVDELSDMYRHLGYPVLEVCAHQREGLTPLHEALAGKTSVFVGQSGVGKSSLINGVLP- 234 Query: 231 QKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEF 290 + ++ ++S NSGLGQHTT ARL H P GG +IDSPG+REFGLWH+ + + G+ E Sbjct: 235 EADLQVGELSSNSGLGQHTTVTARLVHLPTGGQLIDSPGIREFGLWHIGEDDLLHGYREL 294 Query: 291 HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSD 347 + G CK+R+C H +PGCA+ A + G I E R N+++I +++ + + +D Sbjct: 295 SELAGYCKFRNCSHRNEPGCALILAAQNGDIDEERLANFYQISDTLNEDGRERYSTD 351 >UniRef50_Q21H92 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Gammaproteobacteria RepID=RSGA_SACD2 Length = 343 Score = 339 bits (870), Expect = 8e-92, Method: Composition-based stats. Identities = 147/347 (42%), Positives = 204/347 (58%), Gaps = 20/347 (5%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADG- 59 M+K +LSK Q R+ +RL TS PD G G+VI+ G VE+ D Sbjct: 1 MAKRRLSKRQVDRIRERQSQRLDTSVAAPD--GKQLGSEQAGLVIAHHGKQVQVETLDNS 58 Query: 60 ----DVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG 115 RC++R T+ S+VTGDR+V++ + GI+ A+ R+S L RPD Y Sbjct: 59 DDSPRRLRCHLRATLGSVVTGDRIVFQEDDSS-------GIIVAIQPRSSTLVRPDSYGK 111 Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLL-----DDEGM 170 +KP+AAN+DQ++I A PE +IDRYL E L I P+++ NK+DLL D Sbjct: 112 LKPVAANVDQLLITIACAPEPFSGLIDRYLAVAENLHIRPVLLFNKLDLLQSDEIDSAIA 171 Query: 171 AFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGL 230 V + +Y ++GYR + + DGL L L S+F GQSGVGKSS++ LL Sbjct: 172 NKVAKLRTLYTSLGYRCIDTCAKNGDGLDELRNTLQDNTSVFVGQSGVGKSSIIKKLLP- 230 Query: 231 QKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEF 290 +EI +SD G+HTTT + L+HFP GGD IDSPG+REFGLWHL P+++T GF+E Sbjct: 231 DQEIAIGALSDAIDKGRHTTTHSELFHFPFGGDCIDSPGIREFGLWHLSPKEVTYGFIEI 290 Query: 291 HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 D GLCK+RDC H +P CA+ AVE+G + R+EN+ RI++S+ Sbjct: 291 RDIAGLCKFRDCSHTHEPSCAVLNAVEDGSLHPERYENFQRIVQSLD 337 >UniRef50_C5D8S1 Putative ribosome biogenesis GTPase rsgA n=6 Tax=Bacteria RepID=RSGA_GEOSW Length = 293 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 118/309 (38%), Positives = 166/309 (53%), Gaps = 22/309 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 EG +I V S G V +C R R + GD V ++ + Sbjct: 1 MAEGKIIKALSGFYYVLSE-GKVFQCRGRGVFRKQKITPLVGDHVEFQATS------ETE 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQI 153 G + + ER + L RP AN++Q ++V A+ P+ S ++DR+LV E+ I Sbjct: 54 GYIMNIRERKNWLVRP--------PIANVEQAILVFSAVEPDFSTRLLDRFLVLVESKHI 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 PIIV+NK+DL+DD+ + + + YR IGY V+ S+ T+ G++ L L G IS+FA Sbjct: 106 RPIIVVNKMDLVDDQTKPTMEQYIRDYRQIGYDVIETSTITKLGVEQLLSYLEGHISVFA 165 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQSGVGKSSLLNAL ++ TNDIS + G G+HTT L GG V D+PG Sbjct: 166 GQSGVGKSSLLNALRP-DLQLKTNDISTHLGRGKHTTRHVELLEI-GGGLVADTPGFSAL 223 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 L +E E++ F EF + CK+R C H +P CA+REAVE GKI R+ENY + Sbjct: 224 ELDDIELEELPLYFPEFCERSEECKFRGCLHIAEPKCAVREAVESGKIPSYRYENYISFV 283 Query: 334 ESMAQVKTR 342 E + + K R Sbjct: 284 EEIKERKPR 292 >UniRef50_Q5ZRX8 EngC GTPase n=6 Tax=Legionella RepID=Q5ZRX8_LEGPH Length = 325 Score = 323 bits (828), Expect = 6e-87, Method: Composition-based stats. Identities = 137/341 (40%), Positives = 201/341 (58%), Gaps = 16/341 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MSK +++K Q R+ + +Y N +G+VI+RF HA++E G Sbjct: 1 MSKRRINKQQSARIAKIQKNY-------HEYMGNNSDNLADGLVITRFSRHAEIEDNQGK 53 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 C+IR + +LV GDRV+W+ +G+V +++ R S+L RP +P+A Sbjct: 54 RILCSIRPNLDTLVAGDRVIWQIEG------EKQGVVVSIYPRGSLLARPSQKGLKRPVA 107 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANI Q+V+V A PE+S ++D YL+ E LQ+ +IVLNKIDL M Y Sbjct: 108 ANITQLVVVIAPKPEISWPLLDSYLIMAEILQVHVVIVLNKIDL---PCQTLQQRLMMDY 164 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 + + Y V+M S+ T D + PL++AL +IS+F GQSGVGKSSL+++LL ++ I + IS Sbjct: 165 QLLNYPVIMASNQTPDTIVPLKQALNNQISVFVGQSGVGKSSLISSLLPHEENIAIDKIS 224 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 S LG+HTT +R YH P GG +IDSPGVREF LW ++ I QG+ EF YL CK+R Sbjct: 225 MVSELGKHTTRNSRYYHLPSGGALIDSPGVREFSLWDIDCSMIAQGYKEFKPYLSQCKFR 284 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKT 341 +C H P CAI +A+ +GKI+ R+EN+ ++ +K Sbjct: 285 NCTHINTPQCAIIDALNKGKISTQRYENFTKLCAQFNSLKE 325 >UniRef50_Q31HZ7 Ribosome small subunit-dependent GTPase A n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HZ7_THICR Length = 340 Score = 322 bits (826), Expect = 9e-87, Method: Composition-based stats. Identities = 130/343 (37%), Positives = 194/343 (56%), Gaps = 12/343 (3%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 M+K KLS Q+RRV + GE G+VI+ FG +E DG Sbjct: 1 MAKRKLSNQQRRRVQQKQHAESGVT-PNTSATSEHLGEKQPGLVITNFGKRLLIEDNDGH 59 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 ++ C R+ + LV GDRV W+ + G+V + RT L+RP F + +A Sbjct: 60 IYNCAARQHLGKLVAGDRVTWQ-----TDIEPNTGVVVSAEPRTQELSRPGFRGQKRMVA 114 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD-DEGMAFVNEQMDI 179 ANID + IV+ + P + ++IDRYLVA L + +I++NKIDL++ DE + E + Sbjct: 115 ANIDWLGIVAPVEPGIHPDMIDRYLVAAHQLDLPVLILINKIDLIESDEQWEAIAELLIP 174 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDI 239 Y + +L VS+ T +G+ L E L + S+F G SG GKSSL+ AL+ EI TN + Sbjct: 175 YDEMDIEILPVSAETNEGMDELREVLMNKNSVFVGPSGAGKSSLIKALIP-DIEIKTNQL 233 Query: 240 SDNSGLGQHTTTAARLYHFPH----GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG 295 S+++GLG+HTTT + LYH P G++IDSPGVR+F E ++ Q + +F +LG Sbjct: 234 SESTGLGKHTTTNSILYHLPEFEGQTGNIIDSPGVRQFSPAPCELHELEQAYPDFAPFLG 293 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 CK+ +C H +P CAI+ AVE G+I TRF+++ R+L + Sbjct: 294 QCKFSNCTHTNEPDCAIKHAVETGEIYYTRFQSFQRLLSEFKE 336 >UniRef50_A4J589 Ribosome small subunit-dependent GTPase A n=3 Tax=Clostridiales RepID=A4J589_DESRM Length = 292 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 106/310 (34%), Positives = 163/310 (52%), Gaps = 25/310 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR-----SLVTGDRVVWRPGKPAAEGVNV 93 EG++I +G V+ D ++ C++R R + GDRV+ P + Sbjct: 1 MFEGVLIRAYGGFYYVKKGD-EIWECSLRGKFRLGKSSPALVGDRVMVTPVRQ------N 53 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 G ++ V R + L RP ANIDQ VIV A+ PE ++ ++DR+LV E + Sbjct: 54 TGRIDEVMPRKTELFRPA--------VANIDQAVIVFAVENPEPNMTLLDRFLVLAENAE 105 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 + P++ LNK DLL +E + +Y+ IGY ++ S+ +G+ L + L G+ ++F Sbjct: 106 VLPVVCLNKGDLLTS---RRDHEWLKLYKRIGYPTIITSTKLGEGINELRQLLIGKTTVF 162 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SGVGKSSLLNA+ E+ T DIS G+HTT L GG V+DSPG Sbjct: 163 AGPSGVGKSSLLNAIQPG-LELKTGDISHKLKRGKHTTRHVELLPLNKGGYVVDSPGFSS 221 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 L + E + F EF ++ CK+ C H +P CA+++A++ G I + R++NY Sbjct: 222 LDLPQMNKEDLAYYFPEFTGFIADCKFNGCLHHREPQCAVKDALDAGLINKERYQNYLLF 281 Query: 333 LESMAQVKTR 342 LE + Q + R Sbjct: 282 LEEVLQQERR 291 >UniRef50_B7H060 Ribosome small subunit-dependent GTPase A n=17 Tax=Acinetobacter RepID=B7H060_ACIB3 Length = 352 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 142/367 (38%), Positives = 209/367 (56%), Gaps = 44/367 (11%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVE----- 55 + K +L++ QQRR+ H+ R ++ + +G+V+ +G +V+ Sbjct: 4 IRKRRLTEQQQRRIEKQHKTR---------QEEVDTSQDLDGLVVQHYGRQLEVQALSVP 54 Query: 56 --------SADGD------------VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 A+G+ V RC+ R + LVTGDRV W+ A+ G Sbjct: 55 DHHPEKPQVAEGEPEPFWKPIELNSVWRCHTRTNLELLVTGDRVKWQ-----ADPNTGLG 109 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 I+ A+H RTS+LTRPD Y VKP+AANI IVIV A LPE + +IDRYLVAC I Sbjct: 110 IITAIHPRTSLLTRPDRYHKVKPVAANISLIVIVFAPLPEPAPTLIDRYLVACADANIPA 169 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++VLNK DLL + + + + Y N+GY V++ S + L + L G F GQ Sbjct: 170 LLVLNKSDLLTENDP--ILDMLKEYENLGYEVMICHSKGD--ISALSQRLDGETVAFVGQ 225 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSL+N L+ E TN IS+NS LGQHTTT+ RL +F G +IDSPG+REFGL Sbjct: 226 SGVGKSSLINVLIP-DAEQKTNIISENSALGQHTTTSTRLINFGKNGALIDSPGIREFGL 284 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 WHL+ ++I GF E +LG C++R+C H + C +++AVE G+I R +++ R+++ Sbjct: 285 WHLDLDKIRMGFPEIEAHLGSCQFRNCTHTHEKNCGLKQAVEAGEILPRRLDSFLRLIDE 344 Query: 336 MAQVKTR 342 + + + + Sbjct: 345 IQEAQQK 351 >UniRef50_B8FYJ7 Ribosome small subunit-dependent GTPase A n=17 Tax=Bacteria RepID=B8FYJ7_DESHD Length = 365 Score = 318 bits (816), Expect = 1e-85, Method: Composition-based stats. Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 18/332 (5%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWR 82 + L G V + + V + G+V + +R GD VV Sbjct: 20 FQPYLKSGFHPGRVAAEYRDRFKVWTEFGEVW-AVVSGKMRYTALERSDFPAVGDWVVLE 78 Query: 83 -PGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLN 139 + + + I++++ R S +R + +A NID + +V+A+ + ++ Sbjct: 79 GRAESIKDHEDQDVIIQSILPRKSKFSRKAAGKTSAEQIVATNIDTVFLVNALNFDFNVR 138 Query: 140 IIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLK 199 I+RYL P++VL+K DL DD V++ D G +L +S T DG+ Sbjct: 139 RIERYLTLAWESGANPVLVLSKTDLCDD-VQEKVSQVQD--AAPGVDILPISCATGDGVS 195 Query: 200 PLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 + + + G SG GKS+L+N LLG ++ T ++ + G+HTTT+ L+ Sbjct: 196 AIAPYIRQGQTIALLGSSGAGKSTLVNYLLGQNVQL-TYEVREKDSRGRHTTTSRELFLL 254 Query: 259 PHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE 318 P GG +ID+PG+RE L+ E +++ F + Y G C++ DC+H+++PGCA+++A+ E Sbjct: 255 PQGGVLIDTPGMREIQLFG-SGEGLSEAFEDIAAYAGNCRFSDCQHESEPGCAVQKAIAE 313 Query: 319 GKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 G ++E R+E++ ++ + + N + + Sbjct: 314 GMLSEERYESFKKLQREARYISRKTNLHEQLE 345 >UniRef50_C9MMH3 Ribosome small subunit-dependent GTPase A n=7 Tax=Prevotella RepID=C9MMH3_9BACT Length = 335 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 107/319 (33%), Positives = 165/319 (51%), Gaps = 22/319 (6%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVNV 93 G+VI G V++ +G C I+ R + GD VV P K Sbjct: 24 GLVIKNTGSWYTVKAENGKNIDCKIKGNFRLKGIRSTNPVAVGDHVVITPNKEGT----- 78 Query: 94 KGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACET 150 + + +R + + R P+ IAANIDQ +V I PE S IDR+L E Sbjct: 79 -AFITEIEDRRNYIIRKSPNLSKQSHIIAANIDQAFLVVTINYPETSTTFIDRFLAGAEA 137 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG----LKPLEEALT 206 ++ +V NK DLL +E + + + M +Y IGY + V + ++ L L Sbjct: 138 YRVPVTLVFNKHDLLSEEELRYQHAVMKLYETIGYECIEVQATNDTSNEFSVEKLNPLLA 197 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 +I++ +G SGVGKS+++NALL + T DISD G HTTT + + P GG +ID Sbjct: 198 NKITLLSGNSGVGKSTIINALLP-HVNLRTADISDAHNTGMHTTTFSEMLELPVGGYLID 256 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG++ FG + +E E++T F E + CK+ +C H +PGCA+R+AVE+ I+E+R+ Sbjct: 257 TPGIKGFGTFDIEREELTSYFREIFKFSEHCKFSNCTHTHEPGCAVRKAVEDHYISESRY 316 Query: 327 ENYHRILESMAQVKTRKNF 345 +Y +LE + K R+ F Sbjct: 317 NSYLSMLEDKEENKYREAF 335 >UniRef50_D1KB75 GTPase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KB75_9GAMM Length = 321 Score = 317 bits (813), Expect = 3e-85, Method: Composition-based stats. Identities = 127/333 (38%), Positives = 186/333 (55%), Gaps = 14/333 (4%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MS + K + ++ A R + + + + GE G+VI+R+G VES GD Sbjct: 1 MSLTRRQKWRIEKIQAERIARAQKASSNSETSLDNAGEEQTGLVITRYGQRLLVESESGD 60 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 +++C R+ I V GD+V+++ +G+V A+ +R + LTR K IA Sbjct: 61 LYQCTGRQNIELSVAGDQVLFQTTD------GNEGVVTALLKRDNSLTR-----SQKLIA 109 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANID++ +V AI P +IDRYLV E + IV+NKI+L + + V +Y Sbjct: 110 ANIDELWLVVAIEPHYQFELIDRYLVVAENASLPINIVVNKIEL--SKNIDQVKYDFSMY 167 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 + GY V +S Q + + L + IF GQSGVGKSSL+N L+ + N+IS Sbjct: 168 ESAGYNVSYLSVKEQTNVAEFKSQLNDKTHIFLGQSGVGKSSLINELIP-DLNLRVNEIS 226 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 S LG+HTTT LYH P GGD+IDSPG+REF L L ++I GF EF ++G CK+R Sbjct: 227 TKSKLGKHTTTNTTLYHIPSGGDLIDSPGIREFQLDDLTDKEILSGFREFKPFIGQCKFR 286 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 +C H +P CAI+ AVE G+I R+ NY +++ Sbjct: 287 NCAHINEPKCAIKTAVEAGEINPMRYNNYLQLI 319 >UniRef50_Q0A8I5 Ribosome small subunit-dependent GTPase A n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8I5_ALHEH Length = 334 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 120/331 (36%), Positives = 179/331 (54%), Gaps = 14/331 (4%) Query: 14 VNANHQRRLKTSKEKPDYDDNLFGEP-------DEGIVISRFGMHADVESADGDVHRCNI 66 V Q R + + +PD++ GEP G V+S G + VE +G ++RC Sbjct: 11 VRTVAQSRSRRHQPRPDHNHPGDGEPPVSPAAGQTGRVVSHHGRESLVEDREGRLYRCLS 70 Query: 67 RRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQI 126 + + + GD V W P + G+++ +H R V+ R + V+ IAAN+D++ Sbjct: 71 LKRVGRPLCGDYVDWHPET------DETGVIDRIHPRHGVIARTAYNGRVQAIAANVDRM 124 Query: 127 VIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR 186 V+VSA+ P +I+RYLV L +EP++ LNK DL D+ + +R G Sbjct: 125 VVVSALEPPPDPELINRYLVLAHHLAVEPLLWLNKTDLDPDQAERLLASVFAGHRARGVA 184 Query: 187 VLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLG 246 V+ S HT +G++ L EAL S+ G SGVGKSSL+ ALL +++ D+S SGLG Sbjct: 185 VMAGSPHTGEGMETLREALREGTSVLVGLSGVGKSSLIKALLP-DRDLRIGDLSARSGLG 243 Query: 247 QHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDT 306 +HTTT LYH P GGD+IDSPG+R L ++ E + F E C++ +C+H Sbjct: 244 RHTTTETTLYHLPEGGDLIDSPGIRALRLANIPREALQPAFPEIARVASGCRFHNCQHRN 303 Query: 307 DPGCAIREAVEEGKIAETRFENYHRILESMA 337 +PGCA+R AVE G+I R H +L+ A Sbjct: 304 EPGCAVRAAVERGEIEPGRLATLHHLLDEAA 334 >UniRef50_Q8YK41 Putative ribosome biogenesis GTPase rsgA 2 n=3 Tax=Cyanobacteria RepID=RSGA2_ANASP Length = 353 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 26/318 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNV 93 G V + V S G++ + +R GD V+ + + Sbjct: 27 GRVAIEYRNTYIVYSKQGEL-AAKVTGKLRHQATQPQDFPAVGDWVIIQTRES-----EG 80 Query: 94 KGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 + + R S +R + +AAN+D + +V + + + I+RYL+ Sbjct: 81 CATIHGILPRKSKFSRKTVGSKTEEQIVAANVDTVFLVCGLDGDFNPRRIERYLILAWES 140 Query: 152 QIEPIIVLNKIDLLD--DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-R 208 P+IVLNK DL + DE ++ V IG +L++S+ G+ L+ L + Sbjct: 141 GANPVIVLNKADLCNSLDECISEVEAV-----AIGVPILVLSATNNQGIDTLKAYLQPGQ 195 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 G SGVGKS++ N L G + + G+HTTT L P GG ++D+P Sbjct: 196 TVALLGSSGVGKSTITNQLKGASVQ-AVQPVRQGDDRGRHTTTNRELILLPTGGLIVDTP 254 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G+RE +W + E + + F + C++R+C+H +PGCA+++A+ EG++ +RF Sbjct: 255 GMREIQIWAGD-ESLQETFADIETLAPECRFRNCQHHNEPGCAVQQALLEGELDYSRFLG 313 Query: 329 YHRILESMAQVKTRKNFS 346 Y ++ + + + ++ Sbjct: 314 YQKLQKELNYLVRKQEQR 331 >UniRef50_A0LCF1 Ribosome small subunit-dependent GTPase A n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCF1_MAGSM Length = 346 Score = 313 bits (802), Expect = 7e-84, Method: Composition-based stats. Identities = 129/345 (37%), Positives = 211/345 (61%), Gaps = 16/345 (4%) Query: 4 NKLSKGQQRRVNAN-----HQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESAD 58 KLS Q+RR+ A ++++ K+++ ++D GEP EG+VI+ +G++ V S Sbjct: 9 KKLSDQQKRRIEAIRERRMNRKQAKSAEHAAEFDAQGLGEPREGLVIAHYGLNVAVTSEG 68 Query: 59 GDVHRCNIRRTI-RSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVK 117 HRC +R T+ + V GDRV+WRPG +N +G++E + R++VL RP Y+ ++ Sbjct: 69 MAEHRCAVRETLPENPVCGDRVIWRPG------LNEQGVIEDIMPRSNVLRRPGPYNRLQ 122 Query: 118 PIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLL-DDEGMAFVNEQ 176 +AAN+D++++ ++ + ++DRYLVA IEP+I++NK+DL+ D+E + + Sbjct: 123 TLAANLDRLLVTTSAA-LFNPFLVDRYLVAASAANIEPVIIVNKMDLIRDEESLDDLAML 181 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 + Y+ + Y ++ VS+ T G+ L++ L+ +S F GQSGVGKSSL+ + + Sbjct: 182 LAPYQEMEYEIVPVSATTGQGMGELDDILSFGLSAFVGQSGVGKSSLVAHWI-DDLSLRI 240 Query: 237 NDISDNSGLGQHTTTAARLYHFPHG-GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG 295 D++ ++G G+HTTT A LY G G +IDSPGVR FGL +EPE++ F + Sbjct: 241 ADVNAHTGKGRHTTTVAHLYPLKSGRGGIIDSPGVRAFGLHGVEPEEVIHHFRDLAPLAQ 300 Query: 296 LCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 C + DCKH+ +PGCA+ EA+E R E+YHRILES+ + + Sbjct: 301 QCHFNDCKHEQEPGCAVLEAIEHEIADAIRLESYHRILESILEEE 345 >UniRef50_B8CXT2 Ribosome small subunit-dependent GTPase A n=2 Tax=Bacteria RepID=B8CXT2_HALOH Length = 367 Score = 313 bits (801), Expect = 8e-84, Method: Composition-based stats. Identities = 85/319 (26%), Positives = 151/319 (47%), Gaps = 16/319 (5%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDV---HRCNIRRTIRSLVTGDRVVWRPGKPAA 88 N V + + + G+V +R + V GD V+ Sbjct: 40 QINNKENYQVARVAVEYKGIYKLYTEAGEVLGEITGKMRYNNKFPVVGDWVIADLQSGG- 98 Query: 89 EGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 + I+ + R S +R + +A+NID I IV+++ + +L I+RYL Sbjct: 99 ----KRAIIHDILPRKSKFSRNRAGSKTQEQIVASNIDTIFIVTSLNQDFNLRRIERYLT 154 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 P+++LNK DL D+ + + + G + ++++ +G+ L+ Sbjct: 155 IAWDSGANPVVILNKADLCDEIEVRKSEVESIAF---GVPIYVIAALENEGVDQLKRYFK 211 Query: 207 G-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 G SGVGKS+L+N+LLG +K + N++ ++ G G+HTTT + GG +I Sbjct: 212 RGETVALLGSSGVGKSTLINSLLGKEK-MKVNNVREDDGKGRHTTTRREMILLDEGGIII 270 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG+RE LW + E I F + C + DC+H+++P CA+++A+EEG I E R Sbjct: 271 DTPGMREIQLWDVS-EGIGNSFSDIEKLAQDCYFNDCQHESEPKCAVKKAIEEGIITEER 329 Query: 326 FENYHRILESMAQVKTRKN 344 F +Y ++ ++ +K Sbjct: 330 FNSYKKLQRERKYIEIKKE 348 >UniRef50_B0NH56 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH56_EUBSP Length = 292 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 96/306 (31%), Positives = 148/306 (48%), Gaps = 21/306 (6%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 +G ++ V + V+ C + R + GD V+ A + G Sbjct: 2 QGKIVKGIAGFYYVHVVESGVYECKAKGVFRKEKIKPLVGDNVIIE----ALDEEQKTGN 57 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 + V +R + L RP ANIDQ ++V AI P N++DR+LV E+ +I Sbjct: 58 ITEVLKRKNELVRPA--------VANIDQALVVFAIVRPNPHFNLLDRFLVMMESKEIPV 109 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 I+ NK D+ D V E IY N GY ++ S+ + ++E L G+ + AG Sbjct: 110 ILCFNKEDIATDPQ---VKELEAIYENCGYPLIFTSALKDKNIDQVKEVLRGKTTAIAGP 166 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSS++N +L + + T IS G+HTT L+ ++D+PG + Sbjct: 167 SGVGKSSIIN-ILQPEANMETGAISSKIERGKHTTRHTELFPVDADSYIMDTPGFSSLYV 225 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 E E++ F EF Y G CK+ C H +PGCA++EAVEEGKI + R++NY + E Sbjct: 226 NDFEKEELKYYFPEFAVYEGTCKFNGCDHIHEPGCAVKEAVEEGKIHKVRYQNYIEMYEE 285 Query: 336 MAQVKT 341 + + Sbjct: 286 LKNKRR 291 >UniRef50_C4ZEV1 Putative ribosome biogenesis GTPase rsgA n=12 Tax=Firmicutes RepID=RSGA_EUBR3 Length = 302 Score = 309 bits (792), Expect = 8e-83, Method: Composition-based stats. Identities = 86/316 (27%), Positives = 144/316 (45%), Gaps = 31/316 (9%) Query: 41 EGIVISRFGMHADVESAD----------GDVHRCNIRRTIRS----LVTGDRVVWRPGKP 86 G +I V + G ++ C + T R + GD V Sbjct: 2 TGKIIKGIAGFYYVYVEETKEAKETATGGTLYECKAKGTFRKQKIKPLVGDTVDI----A 57 Query: 87 AAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYL 145 + G VE + R + L RP +NID +++ A P+ + N++DR+L Sbjct: 58 VLDEEKHIGNVERILPRKNELIRPA--------VSNIDMALVIFASAKPDPNFNLLDRFL 109 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 E + I NK DL+ + + IY GYRV+ S+ T +G+ ++ L Sbjct: 110 CMMEYQHVPVTICFNKKDLITPQKQQELK---SIYEPAGYRVMFTSTKTGEGIDEIKHVL 166 Query: 206 TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 GR + AG SGVGKSS++N L ++ T IS+ G+HTT + + G ++ Sbjct: 167 EGRTTTVAGPSGVGKSSIINCL-QDDVQMETGHISEKIERGKHTTRHSEIIPIKDGTYIM 225 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG + E E + + EF +Y C+++ C H +P C ++EA+ EGKI++ R Sbjct: 226 DTPGFSSMDVPGFEKEDLWTCYPEFVEYEPYCRFQGCSHINEPDCGVKEALSEGKISQVR 285 Query: 326 FENYHRILESMAQVKT 341 ++NY + E + + Sbjct: 286 YDNYKLLYEELKNRQK 301 >UniRef50_A7Z4J8 Putative ribosome biogenesis GTPase rsgA n=31 Tax=Bacilli RepID=RSGA_BACA2 Length = 296 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 104/311 (33%), Positives = 157/311 (50%), Gaps = 23/311 (7%) Query: 39 PDEGIVISRFGMHADVESA-DGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 EG +I V + +C R R + GD V++ + Sbjct: 1 MPEGKIIKALSGFYYVLDESQDKIIQCRGRGIFRKNKITPLVGDYAVYQAEN------DK 54 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQ 152 +G + + ERT+ L RP +N+DQ V+V A+ P S +++DR+LV E Sbjct: 55 EGYLLEIKERTNELIRP--------PISNVDQAVLVFSAVQPAFSTSLLDRFLVLVEANG 106 Query: 153 IEPIIVLNKIDLL-DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISI 211 I PII + K+DL D E + + Y+ IGY V + SS GL + + + ++ Sbjct: 107 IHPIICITKMDLAADGESKEAILSYVKDYQAIGYDVYVTSSKENSGLTGIVKHFENKTTV 166 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 FAGQSGVGKSSLLNA+ + E+ TN+IS + G G+HTT L H GG V D+PG Sbjct: 167 FAGQSGVGKSSLLNAISP-ELELKTNEISTHLGRGKHTTRHVELIH-TSGGLVADTPGFS 224 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 +E E++ F E + CK+R C H +P CA+++AVEEG+I R+E+Y Sbjct: 225 SLEFTGIEEEELGSTFPEIREISASCKFRGCLHLKEPKCAVKQAVEEGEIQPYRYEHYKE 284 Query: 332 ILESMAQVKTR 342 ++ + + K R Sbjct: 285 FMQEIKERKPR 295 >UniRef50_C9R7Y8 Ribosome small subunit-dependent GTPase A n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y8_AMMDK Length = 292 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 155/306 (50%), Gaps = 22/306 (7%) Query: 42 GIVISRFGMHADVESAD-GDVHRCNIRRTI--RSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 G +I G A V D G V R + ++ GD V + P +G++E Sbjct: 3 GQIIRIHGGFAFVRDPDTGKVWTALRRGKLAEEKILVGDLVEFSP------LDEERGVLE 56 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPII 157 V R + L RP AN++Q ++V A P+ + ++DR+LV ++ +I+PII Sbjct: 57 KVLPRKTELYRP--------PVANVEQALLVFAFTEPDPNFKLLDRFLVLSQSAKIKPII 108 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSG 217 NK+DL E+ Y G+ L VS+ T GL+ L+ L+ R+++ AG SG Sbjct: 109 CFNKLDLASP---GLYQEERRAYEEAGFVFLAVSAKTGQGLEELKRHLSHRVTVLAGPSG 165 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 VGKSSLLNA+ ++ T +S +G G+HTT L GG V+D+PG L Sbjct: 166 VGKSSLLNAIQPG-LKLQTAPVSRKTGRGRHTTRLVELLPLDIGGLVVDTPGFTSLDLPD 224 Query: 278 LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 + P ++ F E C++ DC H +PGCA+REAV EGKI R+++Y L + Sbjct: 225 IPPASLSAYFPEIARVGAGCRFSDCLHQAEPGCAVREAVAEGKIPRFRYQHYLVFLGEIL 284 Query: 338 QVKTRK 343 + + RK Sbjct: 285 ERERRK 290 >UniRef50_A1AWN3 Ribosome small subunit-dependent GTPase A n=2 Tax=sulfur-oxidizing symbionts RepID=A1AWN3_RUTMC Length = 318 Score = 308 bits (790), Expect = 1e-82, Method: Composition-based stats. Identities = 125/331 (37%), Positives = 187/331 (56%), Gaps = 17/331 (5%) Query: 8 KGQQRRVNANHQRRLKTSKEKPDYDDNLFGEP---DEGIVISRFGMHADVESADGDVHRC 64 Q+ R+ R+ + + + + L G+VI+R+G V++ G++++C Sbjct: 2 HHQKWRLKKTQVERIARTNKASNNFEELPVNTNKKQTGLVITRYGQRLLVKANSGELYQC 61 Query: 65 NIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANID 124 RR I + GD+V+++ + +GIV A+ +R + L R K IAANID Sbjct: 62 TARRNIDLSIAGDQVIFQITQS------NQGIVTALIKRHNQLHRAH-----KLIAANID 110 Query: 125 QIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 Q+ +V+AI P +IDRYLV E ++ IV+NKIDL D M + +Y NIG Sbjct: 111 QLWLVAAIEPHYQFELIDRYLVVAENAKLPINIVVNKIDLASD--MKKIKFDFSMYENIG 168 Query: 185 YRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSG 244 Y V +S Q + L+ L + +IF GQSGVGKSSL+N L+ + N+IS S Sbjct: 169 YSVNYLSVKKQININQLKTQLNKKSNIFLGQSGVGKSSLINELIP-NLNLGVNEISAKSK 227 Query: 245 LGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKH 304 LG+HTTT LY+ P GGD+IDSPG+REF L L ++I GF EF + CK+R+C H Sbjct: 228 LGKHTTTNTILYNIPSGGDLIDSPGIREFQLDELINQEILNGFKEFKPLINACKFRNCAH 287 Query: 305 DTDPGCAIREAVEEGKIAETRFENYHRILES 335 +P CAI+ AV+ GKI + R+++Y ++ S Sbjct: 288 IFEPKCAIKLAVKSGKIHQKRYQSYLTLVSS 318 >UniRef50_C0YJK5 GTP-binding protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJK5_9FLAO Length = 308 Score = 307 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 100/314 (31%), Positives = 162/314 (51%), Gaps = 19/314 (6%) Query: 41 EGIVISRFGMHADV-ESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGV 91 +G +I G V E + IR + L GD V ++ + Sbjct: 2 KGKIIKSTGSWYQVLELETNKIFEARIRGKFKLIKTRLTNPLAVGDFVEFQLEQDDIAW- 60 Query: 92 NVKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQI-VIVSAILPELSLNIIDRYLVAC 148 + + R++ L R + IA+NID I + PE SL +DR+L C Sbjct: 61 -----ITKIEPRSNYLIRKSVNLSKEAHIIASNIDLACFIFTLKHPETSLGFLDRFLACC 115 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E I P+I+ NKID+L +E + V + +Y+ IGY L +SS+++ L L+E L + Sbjct: 116 EAYNITPLILFNKIDVLHEEEIEIVKDIEFLYQEIGYNTLEISSYSKLNLDQLQEILKDK 175 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 S+F G SG GKS+L+NAL + T++ISD G+HTTT A+++ + GG+VID+P Sbjct: 176 TSVFFGHSGCGKSTLVNALQPG-LNLKTSEISDTHLKGKHTTTFAQMHFWDFGGNVIDTP 234 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 GVREF + +E E++ F E CK+ +C H +P CA+ +A+E G+I +R+ Sbjct: 235 GVREFAMIDIEKEEVQHYFPEIFKKREECKFHNCLHVNEPKCAVIDALETGEIQHSRYAT 294 Query: 329 YHRILESMAQVKTR 342 Y ++++ + + Sbjct: 295 YIKLMDEAEEASQK 308 >UniRef50_C5S7F8 Ribosome small subunit-dependent GTPase A n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7F8_CHRVI Length = 333 Score = 306 bits (785), Expect = 5e-82, Method: Composition-based stats. Identities = 137/337 (40%), Positives = 194/337 (57%), Gaps = 11/337 (3%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYD---DNLFGEPDEGIVISRFGMHADVESA 57 M+K +LS Q R+ A +RR + +P+ + EP+EG V+ R G + VE A Sbjct: 1 MAKRRLSARQIERIQAIQERRRERLAARPERALAELDDELEPEEGRVVVRHGANLAVEDA 60 Query: 58 DGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVK 117 G + C R+ I +V GDRVVW+ + +G+V A R S L+RPD+ K Sbjct: 61 HGHLIHCLARQNIGHVVCGDRVVWQR------LPDGQGVVTATLPRISTLSRPDYSGRDK 114 Query: 118 PIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDL-LDDEGMAFVNEQ 176 P+AAN+ ++ I+ A PE S +ID+YLVA E + +E I+V NK+DL E A + Sbjct: 115 PLAANLTRLAILIAPEPEPSGYLIDQYLVAAELIGVEAILVGNKMDLLAGAEERAAFQTR 174 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILT 236 Y IGYR +S + + L L+G+ S+ GQSGVGKSSL+ LL +EI Sbjct: 175 FAHYGAIGYRTFWISLLEPESIGGLVAELSGQTSVLVGQSGVGKSSLVKLLLP-DQEIQI 233 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL 296 +S +GLG+HTT+AA Y G +IDSPGVR F L ++ + QGF EF +LG Sbjct: 234 GRLSQATGLGRHTTSAATCYRLSGDGFLIDSPGVRSFRLGDIDRHGLQQGFREFRPHLGR 293 Query: 297 CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 C++ DC+HD +P CAIR+AVE+G IA R N+H +L Sbjct: 294 CRFGDCRHDQEPDCAIRQAVEDGLIAPERLANFHHLL 330 >UniRef50_B1YIP8 Ribosome small subunit-dependent GTPase A n=2 Tax=Exiguobacterium RepID=B1YIP8_EXIS2 Length = 301 Score = 306 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 113/317 (35%), Positives = 160/317 (50%), Gaps = 24/317 (7%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPA 87 +N + EG +I G DV + G++ R R V GD VV Sbjct: 2 AENRIEDNREGTIIRLQGGFYDVMTPQGEIRS-RARGNFRKRGISPVVGDEVVLHIES-- 58 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLV 146 G + V +R + L RP ANIDQ +++VSA P+ S +++DR+LV Sbjct: 59 -----ETGYILEVKDRQNFLVRP--------PVANIDQALLVVSAAEPDFSAHLLDRFLV 105 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 E +I+PII+L K+DLL E V+E + YR IGY+V+ SS T G++ + L Sbjct: 106 LIEAKEIQPIIILTKMDLLQGEAEQHVSEAIAAYRTIGYQVIETSSETLTGVESVRPLLK 165 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 + S+ AGQSGVGKSSLLNAL + T+ IS G G+HTT L G + D Sbjct: 166 DKTSVLAGQSGVGKSSLLNALEPS-LALETSHISKALGRGRHTTRHVTLMPLGDGL-IAD 223 Query: 267 SPGVREFGLWH-LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 +PG H +E E++ F EF CKYR C H +PGCA+++AVE +I +R Sbjct: 224 TPGFSNLDFPHEMELEELRWCFPEFVALQDDCKYRGCLHLNEPGCAVKQAVEAHEIMSSR 283 Query: 326 FENYHRILESMAQVKTR 342 + NY +E + R Sbjct: 284 YTNYGMFVEEIKNRTRR 300 >UniRef50_Q8R9T7 Putative ribosome biogenesis GTPase rsgA n=16 Tax=Clostridia RepID=RSGA_THETN Length = 295 Score = 306 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 93/313 (29%), Positives = 157/313 (50%), Gaps = 25/313 (7%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 E +G ++ V + G + C R R + GD + Sbjct: 2 ERIQGRIVRGIAGFYYVATERG-IIECRARGKFRKDNIIPLVGDIAEVQLVN------EK 54 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 +G + + R + L RP AN+DQ +IV AI PE++ ++D+ +V E + Sbjct: 55 EGYILEILPRKNQLVRP--------PVANVDQAIIVFAISKPEINRVLLDKMIVVAEINK 106 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 IEP++ +NK+D+ E V +++YR IGY+ + S+ T +G++ L+ L +IS F Sbjct: 107 IEPVVCINKVDM---EKREEVENLINVYRKIGYKAVGTSAVTGEGMEELKSYLKDKISFF 163 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SGVGKSSL+N L+ + T ++S+ G G+HTT + GG V+D+PG Sbjct: 164 AGPSGVGKSSLIN-LIQSNIRLKTGELSEKLGRGRHTTRSVEFLPLDFGGYVLDTPGFTA 222 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + + E++ F EF ++ C++ C H +P CA+ EAV+EG I R+ +Y + Sbjct: 223 LEI-DIPKEELRNYFREFIEFQENCRFNSCLHVNEPDCAVTEAVDEGIIDRQRYISYLTL 281 Query: 333 LESMAQVKTRKNF 345 L + + + R+ Sbjct: 282 LREVKEKEKRRYK 294 >UniRef50_Q88WF3 Putative ribosome biogenesis GTPase rsgA 2 n=3 Tax=Lactobacillus plantarum RepID=RSGA2_LACPL Length = 352 Score = 306 bits (784), Expect = 7e-82, Method: Composition-based stats. Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 24/308 (7%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNV 93 G +I + V + G+ + + GD V + Sbjct: 27 GRIIGQHRDWYQVITTAGE-RSAQVTGKLAYEAASPAAFPAVGDWVCLSSS------ADN 79 Query: 94 KGIVEAVHERTSVLTRPDFYDGV-KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 + +EA+ R SVL R + IA NI+ I I ++ + ++ ++RYL Sbjct: 80 QAQIEAIAPRQSVLARGAVNRQDGQIIATNINTIFICMSLNADFNVRRLERYLTIAWDSG 139 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RISI 211 P+IVL K DL D + D+ ++G + S T GL L+ LT + Sbjct: 140 ALPVIVLTKADLCTDLATK-LRAVADV--SVGVPTITCSVETGQGLDELQPYLTTGQTVA 196 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 F G SGVGKS+L+N LLG + T I + G+HTTT+ +L P G VID+PG+R Sbjct: 197 FVGSSGVGKSTLINRLLGQDI-LATKSIRTDDNKGRHTTTSRQLIPLPTGACVIDTPGMR 255 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 E ++ + + Q F E CK+ DC H ++PGCA+R AVE G + R ++Y + Sbjct: 256 ELQIFMGD---LNQTFAEIAALATQCKFNDCTHTSEPGCAVRAAVEVGTVTSERLQSYQK 312 Query: 332 ILESMAQV 339 + M+ Sbjct: 313 LQREMSYQ 320 >UniRef50_B4RG68 Ribosome-associated GTPase n=2 Tax=Caulobacteraceae RepID=B4RG68_PHEZH Length = 360 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 90/330 (27%), Positives = 152/330 (46%), Gaps = 19/330 (5%) Query: 30 DYDDNLFGEPDEGIVISRFGMHADVESADGDV------HRCNIRRTIRSLVTGDRVVWRP 83 D+ G VI + + + G+ R + V GD V + P Sbjct: 14 DFASYAAQGLKAGRVIVQQRGGYRLITEAGETDAKAAGRLMKSREEMARPVAGDWVAYEP 73 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNII 141 K V+ V R + R GV + +AAN+D +V+++ +L+L + Sbjct: 74 RKAP-----EPAFVQHVLPRRTAFVRKAAGRGVHAQVVAANVDVAFLVTSLNSDLNLRRL 128 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 +RYL P+IVL K DL D + VL V++ +GL+ + Sbjct: 129 ERYLATAHESGARPVIVLTKADLAPDAAERVAEVRTIAGEA---PVLAVAAKQGEGLEAV 185 Query: 202 EEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 L R ++ G SG GKS+LLNAL G ++ + T +I ++ G+HTTT L P Sbjct: 186 AAHLEPGRTAVLLGMSGAGKSTLLNALAGSER-MATGEIREDDERGRHTTTHRELVLLPS 244 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 GG ++D+PG+RE GLW + ++ F + +G C++ DC H +PGCA+R A+ +G Sbjct: 245 GGLILDTPGMRELGLWDADA-GVSAVFEDIEALVGECRFSDCGHGGEPGCAVRAALADGS 303 Query: 321 IAETRFENYHRILESMAQVKTRKNFSDTDD 350 + R+ ++ ++ A + R++ + Sbjct: 304 LDPDRWASFRKLQAEAAYEQRREDPRAAAE 333 >UniRef50_C1ABL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RSGA_GEMAT Length = 307 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 156/294 (53%), Gaps = 18/294 (6%) Query: 53 DVESADGDVHRCNIRRTIRS-------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTS 105 +V + G+ ++R ++ L GDRV AE + +H RTS Sbjct: 18 EVYTEQGERFSASMRGRLKHEAHGALKLAVGDRVTIARDAQHAE----TWAITDIHPRTS 73 Query: 106 VLTR--PDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKI 162 L R P G + + AN+DQ+++V A P+ ++DR+LV E + IV+NK Sbjct: 74 KLARRMPGGRYGERIVVANLDQVLVVFAAARPDPHPRMLDRFLVIAEANGLSARIVINKA 133 Query: 163 DLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSS 222 DL+ E A + GY V S HT +GL+ L + + R S +G SGVGKSS Sbjct: 134 DLVSPEVSAAL---FADQMAAGYPVHHTSIHTGEGLEALRDEVEHRSSALSGPSGVGKSS 190 Query: 223 LLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQ 282 L+NAL ++ T +SD G+HTT A L+ PHGG + D+PG+RE GLW +E Q Sbjct: 191 LMNALFPG-LDLRTAAVSDAVNKGRHTTVGAMLHPLPHGGFIADTPGLREVGLWGIEAGQ 249 Query: 283 ITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + F EF L C++ DC H +PGCA+REAVE G ++ R+E+Y ++ + + Sbjct: 250 VASCFPEFRPLLSACRFADCIHTVEPGCAVREAVEAGDVSPGRYESYVKLRDEL 303 >UniRef50_B0SZL3 Ribosome small subunit-dependent GTPase A n=1 Tax=Caulobacter sp. K31 RepID=B0SZL3_CAUSK Length = 355 Score = 305 bits (781), Expect = 1e-81, Method: Composition-based stats. Identities = 89/330 (26%), Positives = 155/330 (46%), Gaps = 21/330 (6%) Query: 29 PDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTI-------RSLVTGDRVVW 81 ++ + G VI + V + +G++ R + GD V Sbjct: 13 AAFEPHARAGHVPGRVIVQHRDGYQVITDEGEL-RAKPSGRLLHEAREAGHPAVGDWVAL 71 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLN 139 V + A+ R + R ++ IAANID +V+++ +L+ Sbjct: 72 SLN-----LVERTATIHAILPRRTAFVRRAADSVQTLQVIAANIDVAFVVTSMNADLNPR 126 Query: 140 IIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLK 199 I+RYL A P++VL K DL +D +E + +G VL+VS+ GL Sbjct: 127 RIERYLAAAWQSGARPVVVLTKSDLCEDPQTQ-ADEIAAL--AVGCPVLVVSARQGVGLD 183 Query: 200 PLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 L +T + G SGVGKS+L+NA LG + + T I ++ G+HTT+ +L Sbjct: 184 ALLAQVTPGETCVLIGSSGVGKSTLVNAFLGEDR-MATKAIRESDDQGRHTTSHRQLVLL 242 Query: 259 PHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE 318 P GG ++D+PG+RE GL + E ++ F + C++ DC H ++PGCA+R A+E Sbjct: 243 PGGGLILDTPGIREVGLIDAD-EGLSVVFDDIERLAESCRFSDCGHASEPGCAVRGALES 301 Query: 319 GKIAETRFENYHRILESMAQVKTRKNFSDT 348 G + R+ ++ ++ +A V+ +++ + Sbjct: 302 GVLDPARWAHFQKLGAELALVEEKQDRAAK 331 >UniRef50_Q3AC25 Putative ribosome biogenesis GTPase rsgA n=9 Tax=Clostridia RepID=RSGA_CARHZ Length = 290 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 93/306 (30%), Positives = 157/306 (51%), Gaps = 24/306 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 EG+V+ + V++ ++ C R + ++TGDRV+ R P N +G+ Sbjct: 2 EGLVVKNYAGFYYVDTGKA-IYMCKARGKFKKDNIKILTGDRVIIRELVP-----NSEGV 55 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEP 155 +E++ R + L RP AN+DQ+++V A P S +IDR LV L++E Sbjct: 56 IESLLPRKNELIRP--------PIANVDQVLLVFAFADPFPSTELIDRLLVMAYALRLEV 107 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++V NK DL++ E + + Y+ I +V+ +++ G+ L + L +IS+ AG Sbjct: 108 VLVFNKFDLVNPES----QKLFEYYKKILPKVVAITARGDTGIDELTDYLNQKISVLAGP 163 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKS+L+N L+ ++ T ++S G+HTT L P GG + D+PG L Sbjct: 164 SGVGKSTLINRLVPG-AKLATGEVSPKIKRGRHTTRHVELIKLPFGGFIADTPGFSNLTL 222 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 ++ ++ F EF+ C + +C H +P C +RE +E G+I R+ENY LE Sbjct: 223 PEMDKLELQSYFPEFNQNRKYCYFPNCLHVKEPNCRVRELLETGEIPPFRYENYLTFLEE 282 Query: 336 MAQVKT 341 + + Sbjct: 283 ITSDER 288 >UniRef50_C9KJ38 Ribosome small subunit-dependent GTPase A n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ38_9FIRM Length = 298 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 154/319 (48%), Gaps = 32/319 (10%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS------LVTGDRVVWRPGKPAAEGVN 92 EG VI + V + G + C +R + +V GDRV + Sbjct: 1 MVEGRVIKAYNSFFYVMTEAG-LVSCKLRGKFKKRRQSTGVVPGDRVAIEL------LPD 53 Query: 93 VKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETL 151 G++E R ++L RP AN+ Q+++ A P+L +++R+LV E Sbjct: 54 GTGVIEQQLPRVNLLRRPA--------VANLTQVILTFAAAAPDLHPLLLNRFLVLAEWS 105 Query: 152 QIE-PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 I +I +NK+DL + + + Y IGY V+ VS+ T G+ L L G +S Sbjct: 106 GIPKIVICVNKMDLHEGP----WQDFLRDYETIGYPVVRVSAQTGQGIDVLRSRLRGEVS 161 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 +FAG SGVGKSSLLN + + T +S+ G+HTT A L + GG ++D+PG Sbjct: 162 VFAGPSGVGKSSLLNQVNPA-LTLATGHVSEKIKRGRHTTRVAELLPYE-GGYIVDTPGF 219 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 + L+ + F EF Y G C++ C H +PGCA++ AVEE I R++ Y Sbjct: 220 SAMEMAELQVTDLPHYFPEFRPYEGACRFSPCSHTHEPGCAVKAAVEERSITRERYDAYE 279 Query: 331 RILESMAQVK---TRKNFS 346 +IL+ + + + +K + Sbjct: 280 QILQEVKEAQMLARKKEYK 298 >UniRef50_D1ALR3 Ribosome small subunit-dependent GTPase A n=10 Tax=Bacteria RepID=D1ALR3_SEBTE Length = 358 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 90/343 (26%), Positives = 161/343 (46%), Gaps = 29/343 (8%) Query: 21 RLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS-------- 72 + ++ + + +L+ +I + V G++ I + Sbjct: 6 KKYGLSDRFEQEASLYNNLFPARIIEQHRDLYKVVCEHGELI-AGISGKLAYHAEDQMSF 64 Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVS 130 GD V+ + + +++ + R SV R + + +AANID I I Sbjct: 65 PAVGDWVMIDR----TDNNSGNAVIKNILGRKSVFVRQTAGTSNEQQIVAANIDIIFICM 120 Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRN--IGYRVL 188 ++ + ++ I+RYL P+IVL K DL DD + E++D + IG V+ Sbjct: 121 SLNSDFNIRRIERYLAVTWDSMATPVIVLTKSDLCDD-----LQEKLDELSSVSIGIDVI 175 Query: 189 MVSSHTQDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQ 247 + SS ++G + + + + F G SGVGKS+L+N L G + +I G+ Sbjct: 176 VCSSEDENGYQAVSSYIEKGKTIAFIGSSGVGKSTLINRLAG-DENQAVQEIRKGDDKGK 234 Query: 248 HTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD 307 HTTT +L P+GG VID+PG+RE L+ + I++ F + + CKY++C H ++ Sbjct: 235 HTTTYRQLKLLPNGGIVIDTPGMRELQLYTGD---ISKTFEDIEELAAQCKYKNCSHVSE 291 Query: 308 PGCAIREAVEEGKIAETRFENYHRILESMAQ--VKTRKNFSDT 348 PGC +R A+E G ++E RF +Y ++ M + +R+ + Sbjct: 292 PGCMVRNAIENGILSEERFGSYLKLQREMEYSNLNSRQTEQEK 334 >UniRef50_A1HMW6 Ribosome small subunit-dependent GTPase A n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMW6_9FIRM Length = 291 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 106/308 (34%), Positives = 161/308 (52%), Gaps = 24/308 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 G+V+ + + V++ D + C +R + L+ GD V + P K Sbjct: 1 MLRGVVVKAYNSYYYVQTGD-KLTMCTLRGRFKKERFSLLVGDEVEYLPLDEG------K 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G++E + R S+L RP + AN+DQ+++ A P+ S IIDR+L+ E Q+ Sbjct: 54 GVIETILPRRSMLKRP--------MVANVDQVILTFAAASPDPSFVIIDRFLILAELSQL 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 I LNKIDL D A + + +D+YR IGY VL S T G+ L L GRI++FA Sbjct: 106 NAQICLNKIDLAD---AAEIGQIVDLYRKIGYSVLETSVKTGQGIDELRRQLYGRITVFA 162 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKSSLLNA+ ++T +IS G G+HTT A L GG V+D+PG Sbjct: 163 GPSGVGKSSLLNAVEPG-LSLVTGEISIKIGRGKHTTRFAELLPLAGGGFVVDTPGFSFT 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + P ++ + F E CK+ C H +P CA+++AV +G IA +R+ +Y +L Sbjct: 222 EFADIVPTELARAFPEIAAAAPACKFNTCLHHKEPQCAVKQAVTDGCIAASRYASYLEVL 281 Query: 334 ESMAQVKT 341 + + + Sbjct: 282 SEVQENRK 289 >UniRef50_A0Z0P9 Ribosome-associated GTPase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z0P9_9GAMM Length = 318 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 137/338 (40%), Positives = 192/338 (56%), Gaps = 20/338 (5%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 MSK++LSK Q RR+ A +R S+ + G+VI+RFG +E +GD Sbjct: 1 MSKSQLSKQQNRRIQAAQERYRSESELGGE----------SGLVIARFGKQVLIEEENGD 50 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 +RR V GD+VVW P G++EA+ R ++++RP+ ++PIA Sbjct: 51 RRTTTLRRRAEDPVAGDQVVWTPQ-------GEHGVIEALLPRRTIISRPNSQGALRPIA 103 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANID+++IV A P N+IDRYLVA I+ +++NK DLL + V + + Y Sbjct: 104 ANIDRLLIVIAPQPLAQANLIDRYLVAASHAGIDASLIVNKADLLSEAP--SVVQLAETY 161 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 +G V+ + G + L + + + GQSGVGKSSL+ LL EI +S Sbjct: 162 SELGVEVVTTGQLSDPGAETLMDMVATQTVALVGQSGVGKSSLIKRLLP-DLEIRIGALS 220 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 D GLG+HTTTAA LYH P GG +IDSPGVREF L HL + I GFVEF LGLC++R Sbjct: 221 DAVGLGRHTTTAAALYHLPGGGRLIDSPGVREFHLSHLPKDAIESGFVEFEPLLGLCRFR 280 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 DC H + CA+ EA E G+I+ R +Y +I+ SM+Q Sbjct: 281 DCSHSHEVRCAVLEAHERGEISSDRLASYRQIVASMSQ 318 >UniRef50_C7R8R7 Sigma 54 interacting domain protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8R7_KANKD Length = 335 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 131/338 (38%), Positives = 201/338 (59%), Gaps = 6/338 (1%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 M+K + ++ R + Q K + D+ +P++GIVISRFG D+ + + Sbjct: 1 MAKPEKKSSKRWRKKPDKQATYIKEKVDRNIDEESLLDPEQGIVISRFGQQVDIADENFE 60 Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 RC +R++ V GDR +R K G++ + R S+L RP + GVKP+A Sbjct: 61 TIRCFLRKSNEVPVVGDRAWFRRQKELP-----TGVLVELEPRRSLLKRPTPHHGVKPVA 115 Query: 121 ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 ANID I ++ A P S ++DRYLVA ++ ++ I++NK D +D+E + +++ +Y Sbjct: 116 ANIDLIALLLAPEPAFSEVLLDRYLVAAQSSELPVWIIMNKWDTVDNEEKESIKKRLQLY 175 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 +++GY + +S++T +G++ L LTG+ + AGQSGVGKS+L+ L EI T ++S Sbjct: 176 QDLGYPIYYISANTGEGVEQLVRNLTGKQLLLAGQSGVGKSTLIGYLFP-NMEIATGEVS 234 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 SGLG HTTTA+RLY ++DSPGVREFGLWHLE I QGF+E CK+R Sbjct: 235 GTSGLGTHTTTASRLYRLDAATYLVDSPGVREFGLWHLEDHDIKQGFIEISTIGEQCKFR 294 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 DCKH +PGCA+ A ++G IA +R +NY +++ Q Sbjct: 295 DCKHLNEPGCAVLAAAKDGAIAASRLKNYQHLIQHFDQ 332 >UniRef50_A6TRW0 Putative ribosome biogenesis GTPase rsgA n=15 Tax=Bacteria RepID=RSGA_ALKMQ Length = 292 Score = 304 bits (778), Expect = 3e-81, Method: Composition-based stats. Identities = 88/308 (28%), Positives = 161/308 (52%), Gaps = 22/308 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 +G +I VE + +V+ C R +R + GD V + N K Sbjct: 1 MSKGKLIKGIAGFYYVEV-NKEVYECKGRGILRKKKLTPLVGDYVEIT----VTDEDNKK 55 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G+++ + R + L RP AN+DQ+++V ++ P+ L+++D +L+ ET I Sbjct: 56 GMIDDIFPRKTELIRPT--------VANVDQVIVVFSVTQPDPHLSLLDHFLILAETQNI 107 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 + +I LNK+DL+ V E + IY +GY V++ S + GL+ LE+ L G+ ++FA Sbjct: 108 DVVICLNKLDLV---QREDVAELVGIYEKVGYPVILTSQNDSIGLEQLEKVLRGKTTVFA 164 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKS+LLN +L + T ++S G+HTT L G V+D+PG Sbjct: 165 GPSGVGKSTLLNRILP-HVTLQTGELSSKIARGKHTTRHVELISLETEGWVVDTPGFSSL 223 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + L+ E++ F++F + C++ C H +P C ++ A++ G++ ++R+ +Y +++ Sbjct: 224 NIDFLKEEELADYFIDFEPFAKDCRFLSCVHLNEPICGVKTALKAGQLVQSRYNSYLQMI 283 Query: 334 ESMAQVKT 341 + + + Sbjct: 284 GEIKKNRR 291 >UniRef50_C6D8C7 Ribosome small subunit-dependent GTPase A n=2 Tax=Bacillales RepID=C6D8C7_PAESJ Length = 370 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 85/332 (25%), Positives = 146/332 (43%), Gaps = 22/332 (6%) Query: 24 TSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVT 75 K + + VI++ + + DG+ H + Sbjct: 21 DWNNKMEQMPASARQLVPARVIAQHSHSYQIMTPDGE-HTATVTGKYEFNAALKSDFPAV 79 Query: 76 GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAIL 133 GD V+ + ++ + R S + R V + + AN+D + I +A+ Sbjct: 80 GDWVMAEKLPG-----ETRSVIHILLPRQSAMIRKAAGSTVDDQVVGANMDYLFITNALN 134 Query: 134 PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSH 193 + ++ ++RYL+A P+I+L K DL DD + G V ++S+ Sbjct: 135 QDFNVRKMERYLIAAWESGASPVILLTKADLCDDPEFFAAQMESA---APGVPVHLISAL 191 Query: 194 TQDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTA 252 G + L L + G SGVGKS+LLN L + T I + G+HTTT Sbjct: 192 QNQGKEQLLPYLQPGKTIAVTGSSGVGKSTLLNWLADENI-METQGIRETDARGRHTTTH 250 Query: 253 ARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAI 312 L+ P G V+D+PG+RE LW + + Q F + C+YRDC+H++DPGCA+ Sbjct: 251 RELFLLPSGALVMDTPGMRELQLWDAH-DGLEQAFSDIEALAAGCRYRDCRHESDPGCAV 309 Query: 313 REAVEEGKIAETRFENYHRILESMAQVKTRKN 344 +A+E+G + R NY + + ++ + ++N Sbjct: 310 LQAIEDGTLEAKRLHNYRKTAKELSHLARKEN 341 >UniRef50_C3J9M6 Ribosome small subunit-dependent GTPase A n=3 Tax=Bacteria RepID=C3J9M6_9PORP Length = 317 Score = 303 bits (777), Expect = 5e-81, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 151/308 (49%), Gaps = 19/308 (6%) Query: 41 EGIVISRFGMHADVE-SADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGV 91 G+V+ G V DG ++ +R +V GDRV +P + E Sbjct: 2 TGLVLRCVGNLCRVLLDGDGGECDALVKGNLRLKGLRSTNPVVVGDRVELQPTREDLE-- 59 Query: 92 NVKGIVEAVHERTSVLTRPDF--YDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVAC 148 + A+ R + + R +AANID +++V+ I PE S +DR+L Sbjct: 60 -HPYYITAICPRRNYIIRKASNLSKESHILAANIDVALLVVTMIQPETSFTFVDRFLATA 118 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E I +++ NKIDL +E + E IY +GY L +S+ GL+ + + GR Sbjct: 119 EAYDIPVVLLFNKIDLYGEEENRRLAEWQLIYAPLGYPTLSISATEGIGLEEVWPHIAGR 178 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP---HGGDVI 265 I + +G SGVGKSSL+NALL + T+ IS G G HTTT + + GG +I Sbjct: 179 IVLLSGHSGVGKSSLINALLPGS-SLRTHSISLAHGTGMHTTTYSAMIPLAAERGGGYLI 237 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 DSPG++ FG + F EF C++ +C H +PGCA+ A+E G+IA +R Sbjct: 238 DSPGIKGFGTLEMNEHNAHHYFREFFALSEGCRFNNCTHINEPGCAVLAALERGEIAPSR 297 Query: 326 FENYHRIL 333 + +Y IL Sbjct: 298 YVSYLGIL 305 >UniRef50_A8FD43 Putative ribosome biogenesis GTPase rsgA n=131 Tax=Firmicutes RepID=RSGA_BACP2 Length = 298 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 111/313 (35%), Positives = 158/313 (50%), Gaps = 25/313 (7%) Query: 39 PDEGIVISRFGMHADVESAD---GDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGV 91 EG +I V G V +C R R + GD VV++ Sbjct: 1 MPEGKIIKALSGFYYVLDESQESGKVVQCRARGIFRKNKITPLVGDYVVYQADN------ 54 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACET 150 + +G + V ERT+ L RP +N+DQ V+V A P S +++DR+LV E Sbjct: 55 DKEGYLLEVKERTNELVRP--------PISNVDQAVLVFSAAEPTFSTSLLDRFLVLVEA 106 Query: 151 LQIEPIIVLNKIDLL-DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 IEPII + K+DLL DE + D YR IGY V + S+ DG++ L +I Sbjct: 107 NHIEPIICITKMDLLKTDEERETIMAYADDYRQIGYEVHLTSTIEGDGIEKLTPHFHNKI 166 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 ++FAGQSGVGKSSLLNA+ + + T+DIS + G G+HTT L G + D+PG Sbjct: 167 TVFAGQSGVGKSSLLNAMSP-ELALKTDDISSHLGRGKHTTRHVELIR-TANGLIADTPG 224 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +E E + F++ D G CK+R C H +PGCAI++AVE +I E R+++Y Sbjct: 225 FSSLEFTGIEAEDLGLYFLDIRDRSGDCKFRGCLHVKEPGCAIKDAVEHDQIKEYRYQHY 284 Query: 330 HRILESMAQVKTR 342 L + K R Sbjct: 285 LEFLTEIKDRKPR 297 >UniRef50_Q82LC4 Putative ribosome biogenesis GTPase rsgA n=23 Tax=Actinomycetales RepID=RSGA_STRAW Length = 370 Score = 303 bits (775), Expect = 8e-81, Method: Composition-based stats. Identities = 96/325 (29%), Positives = 144/325 (44%), Gaps = 15/325 (4%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHR----CNIRRTIRSLVTGDRVVWRP 83 + ++ G VI DV + G + +R + TGD V P Sbjct: 27 EAEFAPYDSEGLLAGRVIRVDRGQCDVVTPGGMLRADTAFVTPHDPMRVVCTGDWVAVEP 86 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNII 141 V R S R + +AAN+D V+ ++ EL L + Sbjct: 87 -------AGDPRYVRTYLPRRSAFVRSTSSKRSEGQILAANVDYAVVAVSLAVELDLGRV 139 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 +R+L +P++VL K DL+ D Q G VL VSS+ +GL L Sbjct: 140 ERFLALAWESGAQPVVVLTKADLVPDATTLSYLVQDVETAAPGVPVLSVSSNLGEGLDVL 199 Query: 202 EEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 L+G S+ GQSG GKS+L NALLG + + D G G+HTTT L P G Sbjct: 200 AAVLSGGTSVLLGQSGAGKSTLANALLGEDV-MKVHATRDVDGKGRHTTTTRNLLALPGG 258 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI 321 G +ID+PG+R GLW E + Q F E C++ DC H +PGCA+ A++ G++ Sbjct: 259 GVLIDTPGLRGVGLWDAE-TGVNQVFSEIEALAAECRFHDCAHTAEPGCAVLAALDTGEL 317 Query: 322 AETRFENYHRILESMAQVKTRKNFS 346 E R ++Y ++L ++ + + Sbjct: 318 PERRLDSYRKLLRENQRIVAKTDAR 342 >UniRef50_A3I6Q8 Ribosome-associated GTPase n=1 Tax=Bacillus sp. B14905 RepID=A3I6Q8_9BACI Length = 356 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 86/330 (26%), Positives = 155/330 (46%), Gaps = 22/330 (6%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRR--------TIRSLVTGDRVVWRP 83 + F V V + +G+ I GD V+ Sbjct: 21 KQSKFKNCVPARVTLEHKHSYRVLAQEGE-WLATIAGHYAYTSLAREDYPAVGDWVLVEK 79 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNII 141 + I+ + +R SV +R + +A+N+D +++V ++ + ++ + Sbjct: 80 MPG-----EERAIIHQLFQRKSVFSRKVAGLEIQEQIVASNVDIVLLVMSLNADFNIRRL 134 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 +RYLVA +PIIVL K DL DD + V E + G V + S+ + +GL + Sbjct: 135 ERYLVAAWDSGAKPIIVLTKADLCDDAS-SLVKEVDSV--AFGVDVFVTSAISGEGLTEI 191 Query: 202 EEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 + T G SG GKS+L NAL G + + +DI ++ G+HTTT L P Sbjct: 192 QALFTEGVTGALLGSSGAGKSTLTNALCG-EMLMKVSDIREDDAKGRHTTTHRELVMLPS 250 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 GG +ID+PG+RE LW+ + + ++ F + + C+YRDC H +P CA+++A+ +G+ Sbjct: 251 GGCLIDTPGMRELQLWN-QGDSLSSSFQDVEELAKACRYRDCTHQKEPYCAVQQAIADGE 309 Query: 321 IAETRFENYHRILESMAQVKTRKNFSDTDD 350 + + R ++Y ++ +A ++ + N + Sbjct: 310 LDQNRLQSYFKLQRELAYMERKTNVQAKLE 339 >UniRef50_D2MKL2 GTPase EngC n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKL2_9BACT Length = 324 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 101/315 (32%), Positives = 160/315 (50%), Gaps = 26/315 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR--------------SLVTGDRVVWRPG 84 ++G VI DV+ D + RC +R T++ + GD V++ Sbjct: 14 REQGRVIRARTGFYDVQHGD-IILRCTLRGTLKRRNRSETGRRLYADPVAVGDWVIF--- 69 Query: 85 KPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV---KPIAANIDQIV-IVSAILPELSLNI 140 + +G++E + R + +R + I AN QIV +VS ++P L+ Sbjct: 70 ---TQLDMEEGVIEDILPRRTKFSRQYAGRHEDIEQVIVANAHQIVAVVSTLMPPLNFRT 126 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKP 200 +DR+L+ E +E ++ LNK+DL+D+ + +Y +GY V+ S + + L Sbjct: 127 LDRFLILAEAGDMEAVVCLNKMDLVDEAQRTELTATFAVYEKLGYGVIYTSINVPESLDA 186 Query: 201 LEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 L AL + S+ G SGVGKSSLLNAL ++ T ++ + G+HTTT + Sbjct: 187 LRNALKDKFSVIVGASGVGKSSLLNALQPS-LDLRTGEVGIRTQKGRHTTTLVERFPLDI 245 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 GG+V D+PG+RE GLW ++ E + F E YLG CKY DC H +P CAI++AVE G+ Sbjct: 246 GGEVADTPGIREVGLWGVDTENLEYYFPEMEPYLGTCKYNDCAHVAEPDCAIQDAVEAGE 305 Query: 321 IAETRFENYHRILES 335 I R+ +Y + Sbjct: 306 IHTERYRSYVVLRTE 320 >UniRef50_B2RLV5 Putative ribosome biogenesis GTPase rsgA n=28 Tax=Bacteroidales RepID=RSGA_PORG3 Length = 315 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 153/319 (47%), Gaps = 19/319 (5%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVN 92 +G+VI G V DG C + +R + GDRV P Sbjct: 2 DGVVIKNTGSQYLVRCTDGTELYCMAKGNLRLKGIRSTNPVAVGDRVEIVPASQ----DG 57 Query: 93 VKGIVEAVHERTSVLTRPDF--YDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACE 149 ++ +H R + + R + AN+D V+V I P + IDR+L E Sbjct: 58 QPAYIKRIHPRRNYIIRRASNLSKESHILGANLDAAVLVCTINDPVTTTVFIDRFLATAE 117 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 ++ I+ NKID E ++ +Y IGY VS+ T +GL L+ L G++ Sbjct: 118 AYRVPVILAFNKIDCYTQEDRLQLDRLSAVYTAIGYPCCHVSAITGEGLPDLKSLLDGKL 177 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH---GGDVID 266 ++ AG SGVGKSSL+NAL+ ++ T IS G HTTT +++ FP G +ID Sbjct: 178 TLLAGHSGVGKSSLINALIP-HADLRTGAISQAHHTGMHTTTFSQMIDFPDLSPGSALID 236 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG++ FG + +++ F E C++ +C H +PGCA+ EA+ G+IAE+R+ Sbjct: 237 TPGIKGFGTLEMGEYEVSHYFPEIFAASKGCRFGNCTHTHEPGCAVLEALRRGEIAESRY 296 Query: 327 ENYHRILESMAQVKTRKNF 345 +Y ILE + R + Sbjct: 297 ISYLSILEDENAERYRPEY 315 >UniRef50_Q60BE0 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q60BE0_METCA Length = 299 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 10/294 (3%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 +G V+ G VE G + C+ RR + GD V W P + +G V Sbjct: 5 RQGRVVCHLGKGLAVEDETGRIVLCHTRRRLGDAAVGDHVRWEPCE------GDQGRVLE 58 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 V R S L RP V+ +AAN+D++ +V A PE + D+ L CE I ++L Sbjct: 59 VLPRRSSLVRPAHGGRVRVVAANLDRVFVVLAPEPEPDWLLADQILAVCEYRHITAALIL 118 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 NKIDL+ G + + + Y GY V +S+ T GL L L S+ +GQSGVG Sbjct: 119 NKIDLV---GASALERALRDYEAAGYEVFRISTRTGAGLDALRSMLHTGCSMLSGQSGVG 175 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KSSL NALL + + ++S +SGLG+HTTT+A LY P GG++IDSPGV FGL ++ Sbjct: 176 KSSLTNALLP-DRNLRIGELSAHSGLGRHTTTSATLYSLPGGGELIDSPGVAVFGLAEVD 234 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 P ++ Q + +FH YLG C++ DC+H D GCA+REAVE G ++ R+E Y ++L Sbjct: 235 PTELAQTYRDFHPYLGKCRFNDCRHVRDKGCAVREAVEAGTLSPARYERYLKLL 288 >UniRef50_Q71YJ7 Putative ribosome biogenesis GTPase rsgA 1 n=23 Tax=Bacillales RepID=RSGA1_LISMF Length = 291 Score = 301 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 102/309 (33%), Positives = 155/309 (50%), Gaps = 24/309 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 EG +I V S G V++C R R + GD V ++ Sbjct: 1 MLEGQIIKALSGFYYVFSE-GKVYQCRARGNFRKRNISPLVGDDVEFQIENKTD------ 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQI 153 G + V R + L RP ANID ++V A+ P+ S N+ DR+LVA E I Sbjct: 54 GYILDVMSRENALVRP--------PVANIDIAILVFSAVEPDFSTNLADRFLVAIEKEDI 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +P+I ++K+DL + + DIY IGY V + + + + +++ ++G+ ++ A Sbjct: 106 KPVICISKMDLASESEKEQIAVYKDIYEAIGYDVFVTN--DEPDKEAIKDYISGKTAVIA 163 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQSGVGKS+LLN+L + T +IS+ G G+HTT L G V D+PG Sbjct: 164 GQSGVGKSTLLNSL-NSDLTLKTAEISNALGRGKHTTRHVELMPIGDG-FVADTPGFSSI 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 L+PE + F E D CK+R C HD +P CA++ AVE +IAE R+++Y +IL Sbjct: 222 EWDDLQPETLQFCFPEMEDRRSGCKFRGCMHDNEPNCAVKTAVEANEIAEFRYKHYIQIL 281 Query: 334 ESMAQVKTR 342 + + K R Sbjct: 282 QELKNRKPR 290 >UniRef50_B0VIG3 Putative GTPase YjeQ n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIG3_9BACT Length = 359 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 159/336 (47%), Gaps = 20/336 (5%) Query: 12 RRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR 71 + + + K + + +G ++ + + +G++ + ++ Sbjct: 33 DEIKEKAEFKASRISTKANQSYKEGLKLVQGRIMEIKSNYRYIVEINGELVTAKMSGRLK 92 Query: 72 S--------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAA 121 GD V + + +E + R S L R + +AA Sbjct: 93 QFLYQSHTIAAVGDFVAVDVANNSDK------RIEKILPRRSALIRYGKGSFQKEIILAA 146 Query: 122 NIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 NIDQ++I S+ P +IDRYL ++PIIV+NKIDLL+DE + EQ Y Sbjct: 147 NIDQVIITSSWRKPRFKAGLIDRYLCIVAIQNLKPIIVINKIDLLEDEQ--ELKEQTAYY 204 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 +GY ++ S G++ L+E L + S+F G SG GK+SL+N L + T ++S Sbjct: 205 EAMGYPLICTSVVNGTGMQELKELLKNKDSVFTGHSGTGKTSLINYLEPS-LNLPTAEVS 263 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 D + G+HTT+ + L + GG ++D+PG++ L + E I + F F CK+ Sbjct: 264 DRNEKGKHTTSQSILIPWSFGGHLLDTPGIKTITLHREDKEHIPKVFPGFERLYSKCKFS 323 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 DC+H + GCA+ EA+EEG I R+++Y + S+ Sbjct: 324 DCRHINEDGCAVLEAMEEGIIPYERYDSYQYLYASL 359 >UniRef50_B5JX14 Ribosome small subunit-dependent GTPase A n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX14_9GAMM Length = 303 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 113/303 (37%), Positives = 174/303 (57%), Gaps = 10/303 (3%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 G VI+ FG H V + G + + + RR + +V GD V++ P + +V+ Sbjct: 5 QHGRVIANFGRHLSVRTQAGQLVKASARRKLGLVVCGDHVLFDPS-------GDEAVVQQ 57 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 V R VL RPD KP+AAN+DQ+ +VSA P + +ID YLV + + +E +++ Sbjct: 58 VQPRHGVLARPDRRGENKPLAANLDQLFVVSAHKPGIDRFLIDSYLVTAKLMGVEAVLLF 117 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 NK DL + + +N + Y ++GYR L S+ + GL+ L + + +I GQSGVG Sbjct: 118 NKDDL--EHDVDALNNTLQYYEDLGYRCLRTSAQSGQGLEKLMDQARDKANILVGQSGVG 175 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KSSL+ LL I +S++SGLG HTTT LY GG++IDSPGVREF W + Sbjct: 176 KSSLIQYLLP-DLSIQVGALSESSGLGSHTTTTTILYQLGDGGELIDSPGVREFATWTQD 234 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 +QI +GF E D C++ +C+H +PGCA+++A+EE + AE R+++Y ++LE Sbjct: 235 EQQILKGFKEIADLGQYCRFHNCRHLKEPGCAVKQAIEENECAEWRYQHYLKMLERAEDA 294 Query: 340 KTR 342 + Sbjct: 295 QRE 297 >UniRef50_C7IKW3 Ribosome small subunit-dependent GTPase A n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IKW3_9CLOT Length = 349 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 83/323 (25%), Positives = 154/323 (47%), Gaps = 16/323 (4%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR---SLVTGDRVVWRPG 84 + +++ +I+ +G V + G+V L GD + Sbjct: 13 ESEWNKMQAQNMYPARIIADYGQMLRVVTHKGEVFVNRPLHKDNNYLHLAVGDWIGLEET 72 Query: 85 KPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLNIID 142 + A +V V R + +R + +AAN+D + ++ ++ + ++ ++ Sbjct: 73 ETAEFP-----LVRFVLSRKTKFSRAAAGIEAKEQIVAANVDTVFLIQSLNRDFNMKRLE 127 Query: 143 RYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLE 202 RYL+A P++VL K D DD + G V+ +SS T +GL+ ++ Sbjct: 128 RYLIAAWDSGALPVVVLTKADCCDDIPQKLA---VATASAPGVEVISISSKTGEGLEEIK 184 Query: 203 EAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 + L G+ G SGVGKS+LLN L + + T++I ++ G+HTTT L P G Sbjct: 185 KFLLPGKTIALLGSSGVGKSTLLNTLADKEL-LKTHEIREDDSRGRHTTTHRELVLLPGG 243 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI 321 G ++D+PG+R +W + + F + G C++ DCKH +PGCA+R A+ G++ Sbjct: 244 GILMDTPGMRALSIWESD-TGMEIMFGDVEKLTGQCRFYDCKHQNEPGCAVRFALNSGEL 302 Query: 322 AETRFENYHRILESMAQVKTRKN 344 R+E++ ++ + MA ++ +K Sbjct: 303 DIARWESWLKLQKEMAHLEAKKE 325 >UniRef50_D1R990 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R990_9CHLA Length = 383 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 122/363 (33%), Positives = 192/363 (52%), Gaps = 32/363 (8%) Query: 3 KNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFG--EPDEGIVISRFGMHADVESADGD 60 + KL+ Q+ R R K K+ + + F E D+G VIS V S D + Sbjct: 31 ERKLAS-QKDRSKYKKTDREKHEKQLAEQRNAKFSRDELDKGRVISIVPQGILVASGDQE 89 Query: 61 VHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPD- 111 C +R ++ + GD V++ P +G++ V R ++L+R D Sbjct: 90 FL-CTLRGVLKKERGLAKNLVTVGDFVLFEKTTP------EEGLIAHVEPRKTILSRADN 142 Query: 112 -FYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD--- 166 + IAANIDQ++I ++ + P L ++IDRY++A + + PIIV+NKIDLL Sbjct: 143 LSRRKEQLIAANIDQVLITASVLSPPLKPSLIDRYIIATQKGGMTPIIVVNKIDLLSTSD 202 Query: 167 ------DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220 ++ A ++ YR G +V+ VS+ T +G++ L+E + + S+F+GQSGVGK Sbjct: 203 AEDPILEQEKALFETFLEGYRQAGLKVIPVSTVTGEGIEALKEQMRDKSSVFSGQSGVGK 262 Query: 221 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP 280 SSL+NAL+G + I + G HTTT L GG ID+PG++ FG+W L+ Sbjct: 263 SSLINALIGSD--LRIGKIVHRTKKGAHTTTTTHLMPLDFGGWCIDTPGIKSFGVWDLDQ 320 Query: 281 EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 ++ F E + CK+ +C H + CA+ +AVEEGKI+ RFE+YH +L S+ Q Sbjct: 321 NELESYFSEIYRVGRTCKFPNCSHLHEEDCAVIQAVEEGKISLLRFESYHDLLHSITQKH 380 Query: 341 TRK 343 R+ Sbjct: 381 LRR 383 >UniRef50_D2RNU7 Ribosome small subunit-dependent GTPase A n=2 Tax=Acidaminococcus RepID=D2RNU7_ACIFE Length = 295 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 25/313 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 G +I + + V DG ++ C ++ ++ + GDRV + Sbjct: 3 TATGRIIKTYNGYYYVAGDDGVLYTCKVKGRMKQKRFIMAAGDRVELEAQ-------GAE 55 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G++ V R ++L RP + AN+D ++ V A P+ S ++D+ L E I Sbjct: 56 GMIRQVLPRQNLLQRP--------LVANLDCLMAVFACGDPDPSFLLVDKLLALAEAAGI 107 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +VLNK DL ++ IY +GY VL V + GL+P+ E + G F Sbjct: 108 PAALVLNKRDLAP---AGLIDRFRSIYEPLGYPVLPVEAREGLGLEPILERVKGHTVAFG 164 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SG GKS+LLN L + T +S G G+HTT A L F GG ++D+PG Sbjct: 165 GPSGAGKSTLLNHLDPS-LTLKTGHVSSKIGRGRHTTRFAELLPF-AGGYIVDTPGFGNI 222 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 L L+ +Q GF E GLC++ C H +P C ++ AVE G+IA +R+ +Y I Sbjct: 223 DLSELQMDQAADGFREIRKQEGLCRFTGCTHTHEPDCEVKAAVERGEIAPSRYASYCTIR 282 Query: 334 ESMAQVKTRKNFS 346 + +A K R S Sbjct: 283 QELADPKKRGKKS 295 >UniRef50_Q71ZZ0 Putative ribosome biogenesis GTPase rsgA 2 n=21 Tax=Listeria RepID=RSGA2_LISMF Length = 346 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 140/318 (44%), Gaps = 22/318 (6%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTI------RSLVTGDRVVWRPGK 85 + + G V + F + V + + + R GD V Sbjct: 14 EQKIAATSSYGRVTAVFRDYYRVITENEEFLASLKRGNFYELSSTSLPAVGDFVEVSSD- 72 Query: 86 PAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYL 145 + +V ER +V +R + + IAAN D +IV ++ + +LN ++RYL Sbjct: 73 ---------AQILSVLERKTVFSRMNKDSEEQLIAANFDYALIVMSLNHDFNLNRLERYL 123 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 PII+L K DL++D + Y G V + + G + LE L Sbjct: 124 TVAWDSGATPIIILTKADLVEDLTAFAQQLETVAY---GVPAYYVDNLSHHGFEALERDL 180 Query: 206 TGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 + G SGVGKSS +N+L G + T I ++ G+HTTT ++ +G V Sbjct: 181 KPNSTLVLLGSSGVGKSSFINSLAGTDL-MKTAGIREDDSKGKHTTTHREMHLLTNGWIV 239 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID+PG+REFG+ + F + + C++ DC H +PGCA++ A+E+G + Sbjct: 240 IDTPGMREFGV-GFNQAGLETTFSDVEELAEGCRFHDCSHTQEPGCAVKAALEDGTLTMQ 298 Query: 325 RFENYHRILESMAQVKTR 342 +EN+ ++ MA + Sbjct: 299 HYENWLKLQREMAYHARK 316 >UniRef50_Q65LI5 GTP-binding protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65LI5_BACLD Length = 350 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 83/320 (25%), Positives = 145/320 (45%), Gaps = 22/320 (6%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVNV 93 G + V + +G I +R GD V RP G Sbjct: 24 GRIALEHKRLYRVWTEEGQ-WLAEISGRLRFEVESRGDYPAVGDWVYMRPR-----GGEK 77 Query: 94 KGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 KGI+ V R S +R + + AAN++ I +V+A+ + ++ I+RYL+ Sbjct: 78 KGIITEVVPRFSKFSRKAAGEPAEEQITAANVNTIFLVNALGLDFNVRRIERYLLLAWES 137 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RIS 210 P+IVL+K D+ D G + ++S+H G+ L+ + Sbjct: 138 GANPVIVLSKADIADRIEEKVRQ---AESVAFGVPIHVISAHEGSGMDELKAYVKQGETV 194 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGKS+++N L ++ + ++ G+HTTT ++ P GG +ID+PG+ Sbjct: 195 ALLGSSGVGKSTIINFFLKEDRQ-AVQSVREDDDKGRHTTTHREMFMLPEGGLLIDTPGM 253 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 R LW E E Q F + C++ DC H T+PGC++REA+ +G++ RF++Y Sbjct: 254 RALELWESE-EGFKQSFSDIDQLAQNCRFSDCLHQTEPGCSVREALADGRLDAGRFQSYL 312 Query: 331 RILESMAQVKTRKNFSDTDD 350 ++ + + ++ + + Sbjct: 313 KLKKELEYLERKTDKRAMQQ 332 >UniRef50_Q11RI7 Putative ribosome biogenesis GTPase rsgA n=3 Tax=Sphingobacteriales RepID=RSGA_CYTH3 Length = 307 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 164/306 (53%), Gaps = 16/306 (5%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRSL--------VTGDRVVWRPGKPAAEGVN 92 +GI+ G V++ DG + +R + L GD V Sbjct: 2 KGIIYKSTGSWYLVKAEDGTYYNARLRGKFKHLDLKVTNPLSVGDFVDMNIDP----LTP 57 Query: 93 VKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQ-IVIVSAILPELSLNIIDRYLVACE 149 + ++ + RT+ + R + IA NIDQ I++V+ P+ S+ IDR+L++CE Sbjct: 58 TEAMIFNIEPRTNYIIRRSSHKTAFGHLIACNIDQSILLVTLKQPKTSIGFIDRFLISCE 117 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 +I +IV NK DL ++ M D+Y +GYR ++ S ++GL L L +I Sbjct: 118 AFRIPAVIVFNKSDLYNEALMEEYLYLKDVYEPLGYRCILTSMEKENGLDELMPLLQNKI 177 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 S+ +G SGVGKS+L+N + Q +I T+ ISD+S G+HTTT A +Y VID+PG Sbjct: 178 SVVSGHSGVGKSTLINKIFP-QLDIKTDIISDHSQKGKHTTTFAEMYDLNETSKVIDTPG 236 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 ++E GL+ +E + ++ F E +G C++ +CKH +PGC ++E VE KIA TR+E+Y Sbjct: 237 IKELGLFEIENDVLSHYFPEMRSLMGQCRFHNCKHTNEPGCRVKEYVEAFKIAPTRYESY 296 Query: 330 HRILES 335 I+ Sbjct: 297 CSIIFE 302 >UniRef50_A6GW90 Putative ribosome biogenesis GTPase rsgA n=25 Tax=cellular organisms RepID=RSGA_FLAPJ Length = 326 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 163/305 (53%), Gaps = 15/305 (4%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVN 92 GIV G V+S G C I+ R + GD V + + + Sbjct: 2 TGIVYKSTGSWYTVKSLQGHFMECRIKGKFRMKGIKSTNPIAVGDVVDYDLDENSDVV-- 59 Query: 93 VKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACE 149 G + +H+R + + R + + IA+N+D + ++ I P + N IDR+LV + Sbjct: 60 -TGTITKIHDRKNYIVRKSVNLSHQMHIIASNLDYVFLLITINNPPTTTNFIDRFLVTAQ 118 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 IE I+V NKID ++ + IY+ IGY+ L VSS G++ L+ + ++ Sbjct: 119 AYGIETILVFNKIDTYNEAMLDEQLFMQYIYQEIGYKCLRVSSTEGKGIEELKNIMKNKV 178 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 ++F+G SGVGKS+L+NA+ + T IS+ S GQHTTT A +Y G +ID+PG Sbjct: 179 TMFSGHSGVGKSTLVNAMEPT-LHLKTKTISEQSKQGQHTTTFAEMYDLSFGAQIIDTPG 237 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 ++ FG+ +E E+I+ F EF CK+ +C H +P CA+++A+E+ KI+ +R+ +Y Sbjct: 238 IKGFGIVDMEKEEISGYFPEFFKLKDQCKFNNCLHKDEPKCAVKDALEKDKISYSRYNSY 297 Query: 330 HRILE 334 +ILE Sbjct: 298 LKILE 302 >UniRef50_B8GPJ8 Ribosome-associated GTPase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPJ8_THISH Length = 289 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 123/296 (41%), Positives = 171/296 (57%), Gaps = 8/296 (2%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 G V++RFG +E G RC RR ++ V GDRV W P + +V Sbjct: 2 THTGRVVTRFGAELVIEDETGQRRRCTSRRRLQDAVCGDRVEWSPSDSGND------VVS 55 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIV 158 A+ R ++L R D +P+AAN+DQ+V+V A P ++DRYLVA E L ++V Sbjct: 56 AILPRHNLLQRLDPRGQTRPVAANLDQVVVVIARRPPPQWPLVDRYLVAIEHLDARALLV 115 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 +NK DL D + YR +GY +L S+ GL L L R SI GQSGV Sbjct: 116 VNKADLEPDPADPQPG-MEERYRQLGYPMLHTSASAGLGLDDLRGELKDRTSILVGQSGV 174 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKSSL+ ALL + + ++S+ +G G+HTTTAA LYH P GGD+IDSPGVR+F L Sbjct: 175 GKSSLIQALLPGE-SLRIGEVSEATGEGRHTTTAASLYHLPGGGDLIDSPGVRDFTPPPL 233 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 E + +GFVEF YLG C++ +C HD +PGCAI+ AV+ G+I+ R+ +Y + + Sbjct: 234 PAEALARGFVEFRPYLGQCRFHNCNHDREPGCAIKAAVDAGEISGERYRSYLAMKK 289 >UniRef50_Q07I14 Ribosome small subunit-dependent GTPase A n=8 Tax=Proteobacteria RepID=Q07I14_RHOP5 Length = 373 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 102/360 (28%), Positives = 163/360 (45%), Gaps = 30/360 (8%) Query: 6 LSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCN 65 L+ + R+N + + + + + V + V G R Sbjct: 11 LTNKDRHRMNTHDELKPLGWSNWFEPKLDRDCADRLARVAAVDRDLLLVMDQTGS-FRAK 69 Query: 66 IRRTIRS--------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--G 115 + GD V + +V AV ER + L R Sbjct: 70 LAGRFLHRTHLPEEMPCVGDWVCLEKRTE-----DDVAVVHAVLERRTSLRRKSANSDFQ 124 Query: 116 VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNE 175 + IA+N+D VIV + + +L ++RYLV IEP+I+L K DL+ E +A E Sbjct: 125 YQMIASNVDYAVIVQSCHFDFNLKRLERYLVMVNEGGIEPLILLTKTDLVSPEVLA---E 181 Query: 176 QMDIYRNIGY--RVLMVSSHTQDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQK 232 Q R+ G V+ +S+ T G+ L + L + F G SGVGKS+++N L+G Sbjct: 182 QTATIRSAGISAPVITLSNVTGAGIDALLQQLVPAKTYCFVGSSGVGKSTVINRLVGR-A 240 Query: 233 EILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD 292 ++ T +S N+G G+HTT L G VID+PG+REFG+ E I F + Sbjct: 241 KLDTGTVS-NTGEGRHTTVRRELILLDGGALVIDNPGMREFGIADAEA-GIETSFADLSA 298 Query: 293 YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES-----MAQVKTRKNFSD 347 C++ DC H +PGCA+REA++ G+I++ FENY ++ + ++ + RKN + Sbjct: 299 LATGCRFNDCSHSAEPGCAVREALKTGQISQAHFENYQKLRKEAAFLDLSNFEKRKNDRE 358 >UniRef50_Q6MEY3 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEY3_PARUW Length = 354 Score = 296 bits (758), Expect = 7e-79, Method: Composition-based stats. Identities = 108/363 (29%), Positives = 184/363 (50%), Gaps = 32/363 (8%) Query: 3 KNKLS--KGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 + KL+ K + + + ++ LK ++ + E EG V+S V G+ Sbjct: 2 QRKLAVAKDRSKYKKTDQEKYLKNLEKGHQQKISKQ-EWLEGRVVSIIPQGILV-DYQGE 59 Query: 61 VHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPD- 111 C ++ ++ + GD V++ +GI+ +V R ++L+R D Sbjct: 60 RISCVLKGLLKRDKTQAKNLVAVGDFVLFEKTHEG------EGIIASVKPRRTILSRADN 113 Query: 112 -FYDGVKPIAANIDQIVI-VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD--- 166 + IA NIDQ++I VS + P L ++IDRY++A ++P+IV+NK+DL D Sbjct: 114 LSRRKEQLIAVNIDQVIITVSVVNPPLKPSLIDRYIIAAHKGNMDPLIVINKVDLFDADD 173 Query: 167 ------DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220 ++ E + Y V+ VS+ +GL L +A+ G+ S+F+GQSGVGK Sbjct: 174 EDQILREQEKDLYQELLKAYAVAKVPVISVSAAKNEGLDLLRQAMLGKSSVFSGQSGVGK 233 Query: 221 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEP 280 SSL+NA+ G ++ + + + G HTTT +L GG ID+PG++ FG+W L+ Sbjct: 234 SSLINAMTG--LDLRVGETVERTKKGSHTTTTTQLIPLEFGGWCIDTPGIKSFGIWDLDK 291 Query: 281 EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 ++ F E H CK+ DC H + CA+R+AVEE I+ R+ +Y ++E+ + Sbjct: 292 SEVEGYFPEIHACGLNCKFPDCTHSHEEQCAVRQAVEEEHISFVRYMSYQVLMETSNEKH 351 Query: 341 TRK 343 R+ Sbjct: 352 IRR 354 >UniRef50_D1YX46 Probable GTPase EngC n=2 Tax=Euryarchaeota RepID=D1YX46_METPS Length = 358 Score = 296 bits (758), Expect = 8e-79, Method: Composition-based stats. Identities = 97/321 (30%), Positives = 157/321 (48%), Gaps = 23/321 (7%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAA 88 G + G V + V + G++ I +R GD V Sbjct: 19 REYAGSHEPGRVSTVTRTGCKVYTKAGEI-NARIPGKLRKDSLLPAVGDWVALSKDDSGT 77 Query: 89 EGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 V+A+ R S ++R D G + IA N+D IV+++ +L+L ++RYL Sbjct: 78 ------YTVQAILPRRSKISRKDAGRVTGEQVIATNVDTAFIVTSLNKDLNLRRLERYLA 131 Query: 147 ACETLQIEPIIVLNKIDLLDDEG--MAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 +EPIIVLNK D+ D + V G + +S+ + GL+ L Sbjct: 132 VARQNAVEPIIVLNKSDVCPDIDGSLNDVKSI-----APGVPIFAISAIQKTGLEQLSPY 186 Query: 205 LTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 + + + G SGVGKS+++NAL G ++ DI ++ G+HTTTA L GG Sbjct: 187 MKEGKTIVLLGSSGVGKSTIINALEGYGRQ-KIGDIREDDSRGRHTTTARELIIMESGGV 245 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 +ID+PG+RE LW + I + F + + CK+ DC+H+T+PGCAI+ A++EG + E Sbjct: 246 IIDNPGMRELQLWDAT-DGIAETFQDIEELSRQCKFSDCQHETEPGCAIKRAIKEGTLPE 304 Query: 324 TRFENYHRILESMAQVKTRKN 344 RFE+Y ++ + +K +K+ Sbjct: 305 ARFESYQKLQRELLALKRKKD 325 >UniRef50_B3QL20 Putative ribosome biogenesis GTPase rsgA n=11 Tax=Chlorobiaceae RepID=RSGA_CHLP8 Length = 311 Score = 296 bits (757), Expect = 9e-79, Method: Composition-based stats. Identities = 115/315 (36%), Positives = 176/315 (55%), Gaps = 20/315 (6%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNI-------RRTIRSLVTGDRVVWRPGKPAAEG 90 E G+V G VE+ DG RC + GDRV +RP A+E Sbjct: 3 ETLSGVVTRVTGATYIVETGDGPKVRCRTVPSTVSENEGSNLVAVGDRVEFRPK--ASET 60 Query: 91 VNVKGIVEAVHERTSVLTRPD------FYDGVKPIAANIDQIVIVSAIL-PELSLNIIDR 143 +G++ V ER SVL R + + IAANIDQIV++++ P + ++DR Sbjct: 61 EMAEGVIVRVEERRSVLERRREVRRNRSKEKEQVIAANIDQIVLITSFDDPPFNSRLVDR 120 Query: 144 YLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEE 203 YLV E+ + +IV+NKIDL + V E +++YRN+ + +VS+ G++ L E Sbjct: 121 YLVFAESEHLPLLIVVNKIDL---DEEGMVEEDLEVYRNLDCNICLVSAEDGRGIEELRE 177 Query: 204 ALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 L R+S F+G SGVGKS+L+N L+G + E+ T + S +G G HTTT++ ++ P GG Sbjct: 178 LLRDRLSAFSGHSGVGKSTLINLLVGRE-ELRTAETSGKTGKGVHTTTSSAMFQLPGGGY 236 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 VID+PG+REF L + E + + EF ++ C + C H +PGCA+ AVE G+I Sbjct: 237 VIDTPGIREFNLAGITRENLRFYYTEFLRFMPECAFSSCSHTVEPGCAVIAAVESGRIDA 296 Query: 324 TRFENYHRILESMAQ 338 R+E+Y +L+S+ + Sbjct: 297 ERYESYLALLDSLDE 311 >UniRef50_A1KRU2 Putative ribosome biogenesis GTPase rsgA n=29 Tax=Neisseriaceae RepID=RSGA_NEIMF Length = 307 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 105/297 (35%), Positives = 152/297 (51%), Gaps = 13/297 (4%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 D + + +G V + DG + + R+ GDRV P + ++E Sbjct: 22 DTAQITASYGRRYIVRTPDGTTYEASTRKKRVDFACGDRVRISPVNA------EQVVIED 75 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 R S+L R D + K IAAN+ Q++IV+A +P S+ ++ R L+A E IE +IVL Sbjct: 76 FLPRQSLLYRQDAWK-TKLIAANVTQLLIVTAAVPSPSMRLLQRALLAAEAAGIEAVIVL 134 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 NK DL A E++ Y +GY V+ + L L L G +I GQSG+G Sbjct: 135 NKADL---PETALWREKLKFYETLGYPVIETRALENADL--LRPVLQGHSNILLGQSGMG 189 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KS+L NALLG Q T DIS G+HTTT ARLY +IDSPG++EFGL HL+ Sbjct: 190 KSTLTNALLGSQ-TARTGDISAALDSGKHTTTHARLYDLNGETQLIDSPGLQEFGLHHLQ 248 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + + F +F +G C++ +C H +PGCA + A E G + R I + + Sbjct: 249 AADLPRYFPDFRHLVGQCRFHNCTHRAEPGCAFKAAAETGAASPERLAFLQGITDEL 305 >UniRef50_D1BMC8 Ribosome small subunit-dependent GTPase A n=3 Tax=Veillonella RepID=D1BMC8_VEIPT Length = 287 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 98/309 (31%), Positives = 157/309 (50%), Gaps = 28/309 (9%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 GIV+ + V+ G +H C +R ++ L+ GDRV Sbjct: 1 MITGIVVKNMNGYFYVQDDTGTIHECKVRGRLKKGRYSLLVGDRVTISED---------- 50 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQI 153 G VE++H R + + RP ANIDQ+V+V A P+++ ++++ LV E I Sbjct: 51 GFVESIHGRHNSMVRPA--------VANIDQVVLVVAAHEPDINELLLNKMLVMIEHADI 102 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 ++ +NK DL+D E +D+Y++IGY+VLM S++ G+ L L +++ FA Sbjct: 103 PIVLCINKCDLMDSET----ETMVDLYKSIGYKVLMTSTYNMTGIDDLRHVLQHKVTAFA 158 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKSSLLNA + + T ++SD G+HTT A LY ++D+PG Sbjct: 159 GPSGVGKSSLLNA-VDPKFAFQTGEVSDKIKRGKHTTRHASLYSLDADSFIMDTPGFSAI 217 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + E++ F EF +Y+ CK+ C H+ +P C I+ A+E G I + R++ Y I Sbjct: 218 EFNDVSLERLPTLFPEFGEYVDTCKFSPCYHEHEPICGIKAALEAGHIHQGRYDAYMSIR 277 Query: 334 ESMAQVKTR 342 + + R Sbjct: 278 NDIESQRKR 286 >UniRef50_Q3A0G9 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RSGA_PELCD Length = 364 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 88/326 (26%), Positives = 138/326 (42%), Gaps = 28/326 (8%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS-------LVTGDRVVWRP 83 +++ + VI G + ADG+ + +R GD V Sbjct: 16 FENYRGQDLVPARVIRVGGGFYTLLGADGEQ-TATLAGQLRHGSTQDALPAVGDWVGIDS 74 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV---------KPIAANIDQIVIVSAILP 134 + + A+ R + L R + + +AAN+D +IV + Sbjct: 75 PQEGGI------RIHAILPRQTALKRATVSNRKGLVEKPGVPQVLAANVDIAIIVCGLNR 128 Query: 135 ELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHT 194 + + I+RYL P+IVLNK D+ + + + G VL+ S+ Sbjct: 129 DYNPRRIERYLTLVHESGAMPLIVLNKSDICPETQARRAEIESIAF---GTPVLVTSAQC 185 Query: 195 QDGLKPLEEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAA 253 DGL L L + G SG GKS+LLN L + + T++IS G G HTTT Sbjct: 186 GDGLDELASHLKAGSTLVLIGSSGAGKSTLLNRLACAEHQ-QTSEISAAVGKGMHTTTHR 244 Query: 254 RLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIR 313 L+ P G VID+PG+RE LW + F E + C++ DC+HD +P C IR Sbjct: 245 ELFPLPGGALVIDTPGLRELHLWGESEAGLASTFPEVIGFAAQCRFSDCQHDQEPDCGIR 304 Query: 314 EAVEEGKIAETRFENYHRILESMAQV 339 +A+ +G + R E+Y + +A Sbjct: 305 QALHDGTLDPARLESYLKQRAEIASA 330 >UniRef50_B1YJQ5 Ribosome small subunit-dependent GTPase A n=67 Tax=Bacillales RepID=B1YJQ5_EXIS2 Length = 349 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 88/321 (27%), Positives = 146/321 (45%), Gaps = 27/321 (8%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAE 89 G V + F V + DG+ + +R GD V+ + Sbjct: 15 NEQLGRVTAVFQKQYRVMTTDGETLS-ELSGKLRFEALTKAELPAVGDWVI------QSG 67 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 KG +E V R++ +R + I AN+D ++V A + ++ ++RYL Sbjct: 68 REAGKGRIERVLPRSTQFSRKAAGTETEEQVICANVDIALLVMAFGHDFNVRRLERYLTV 127 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRN--IGYRVLMVSSHTQDGLKPLEEAL 205 P+IVL K L A +E + G V S T +GL L EAL Sbjct: 128 AWEAGATPVIVLTKKSL-----TASADEFLSEVEAVAFGTPYFAVDSLTGEGLDDLREAL 182 Query: 206 -TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 + G SGVGKS+L+NAL Q + T + ++ G+HTTT L G + Sbjct: 183 RPNETIVLVGSSGVGKSTLVNALAEEQL-METGGVREDDERGRHTTTHRELKRLSSGLLL 241 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 +D+PG+RE GLW + +T F + + C++RDC+H +PGCA++ A+ EG ++ Sbjct: 242 VDTPGMRELGLWDGT-DGLTSTFSDIEELAESCRFRDCQHGEEPGCAVQAALTEGTLSHE 300 Query: 325 RFENYHRILESMAQVKTRKNF 345 R+ ++ ++ +A + ++N Sbjct: 301 RWGSFLKLKHEVAYAERKQNA 321 >UniRef50_B3EBY9 Ribosome small subunit-dependent GTPase A n=1 Tax=Geobacter lovleyi SZ RepID=B3EBY9_GEOLS Length = 333 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 94/321 (29%), Positives = 151/321 (47%), Gaps = 30/321 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVN 92 +I V A+G++ +R V GD V+ +P + Sbjct: 25 PARIIRGEKNFFRVLCAEGEL-TVRFTGRMRHGAGTRADLPVVGDWVMVQPQP------D 77 Query: 93 VKGIVEAVHERTSVLTRPDFYDG---------VKPIAANIDQIVIVSAILPELSLNIIDR 143 +G++ A+ ER S R + IAAN+D +++VS + + +L I+R Sbjct: 78 GRGMIHAILERKSSFARNLPGRRKIKGRERAEQQVIAANVDLVLVVSGLDRDFNLRRIER 137 Query: 144 YLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEE 203 YL E ++VLNK DL ++ + ++ V + L+ L Sbjct: 138 YLTLVGGSGAEAVVVLNKADLCENPQRCLAQVKEIAPKS---PVYSCEARDPRQLEFLLP 194 Query: 204 ALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGG 262 L R G SGVGKS++LN LLG Q++ ++S G G+HTTT L+ P GG Sbjct: 195 HLQPGRTLALLGSSGVGKSTILNGLLGEQRQ-KIGEVSQADGKGRHTTTHRELFQLPQGG 253 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIA 322 +ID+PG+RE LW + E + + F + + G CK+ DC+H +PGCA+ AVE G+I Sbjct: 254 ILIDNPGMRELHLWG-DEEDLVESFSDIEELSGKCKFSDCRHQVEPGCAVLRAVEIGEIT 312 Query: 323 ETRFENYHRILESMAQVKTRK 343 R NYH++ + ++ R+ Sbjct: 313 HERLGNYHKLKAELTSLQRRR 333 >UniRef50_D2R982 Ribosome small subunit-dependent GTPase A n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R982_9PLAN Length = 375 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 105/342 (30%), Positives = 178/342 (52%), Gaps = 20/342 (5%) Query: 2 SKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDV 61 ++ KG R D ++ E G V+S G+ + V+ G++ Sbjct: 41 NERVSGKGDLTRKRTVVGDHAGRESAGFDVTPDVSSEMIAGRVLSVHGLLSHVQIPSGEI 100 Query: 62 HRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY 113 RC RR +++ + GD V +RP + +G++E + R + L+R Sbjct: 101 IRCATRRVLKNLSTDQRHVVAAGDIVYYRPNGTS------EGLIERIEPRANTLSRTSKG 154 Query: 114 DGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAF 172 I AN+DQ++IV SA P L N+IDR +V E I P++ +NK+DL++ + Sbjct: 155 RQ-HVIVANVDQVLIVASAAEPSLKPNLIDRMIVEAERTGIRPVVCINKVDLVEPSDL-- 211 Query: 173 VNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQK 232 +Y +GY VL++S+ G+ L + + G+ ++ AGQSGVGKSS+LNA+ Sbjct: 212 -QPIAGVYGQLGYDVLLLSAKENWGISRLRKLVAGKQTVVAGQSGVGKSSILNAIENG-L 269 Query: 233 EILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD 292 + +S+ + G+HTTT A+L GG V+D+PG+R F LW + P ++ + + Sbjct: 270 ALRVGRVSEENQKGRHTTTTAKLIPLAAGGYVVDTPGIRSFELWDIIPAEVIGYYRDLRP 329 Query: 293 YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 Y+ LC+Y DC H + CA+++AV +G++ R+E+Y + E Sbjct: 330 YVCLCRYPDCTHLHETDCAVKDAVADGRLDVRRYESYCYLFE 371 >UniRef50_B3QWC8 Ribosome small subunit-dependent GTPase A n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QWC8_CHLT3 Length = 383 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 20/320 (6%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNV 93 +I + + ++ + GD VV + N Sbjct: 56 ARIIEVNKNNYKISDGQHEIF-AELSGKFLFAIETILDYPTVGDWVVVQCFDN-----NS 109 Query: 94 KGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 I+ + R S+L R D + IAANID +I+ A+ +LN ++RYLV Sbjct: 110 HAIIHHILPRKSLLKRKDPGKAIDFQLIAANIDYALIMQAVDSNFNLNRLERYLVMIHES 169 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRIS 210 I+PII+L+K DL+ + +A + E + + Y +L +S+ T+DG++ L++ L + Sbjct: 170 HIQPIIILSKTDLISENELAIMMENILHFNKK-YLLLSISNITEDGIRSLQKELQSDKTY 228 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGK++L N LLG + N++ + G+HTTT +L G ID+PG+ Sbjct: 229 CLLGSSGVGKTTLFNKLLG-EARFGVNEVREKDSKGRHTTTRRQLLRLESGSIFIDTPGM 287 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE G + ++ + + F E C+++DC H + GCA+++AV G I E R++N+ Sbjct: 288 REIGTFAIDS-GLDETFDEIVSLSRECRFQDCSHTHEDGCAVKDAVLNGTIDEARYQNFL 346 Query: 331 RILESMAQVKTRKNFSDTDD 350 +I + + D Sbjct: 347 KIQKESNYYEMSYLEKRKKD 366 >UniRef50_B1ZUH7 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Opitutus terrae PB90-1 RepID=RSGA_OPITP Length = 367 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 88/326 (26%), Positives = 139/326 (42%), Gaps = 19/326 (5%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWR 82 + V + SA G++ + GD V R Sbjct: 16 FQPFASENFLPARVALEHKHACVLLSARGEI-TATCTGRLLHETATRAALPAVGDWVAVR 74 Query: 83 PGKPAAEGVNVK---GIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELS 137 + G + AV R + TR D + +A N+D + +V+ + + + Sbjct: 75 LRPESLASGAGVALVGDIHAVLPRRTAFTRRAVGDADAEQVLATNVDTVFLVTGLDRDFN 134 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 L I+RYL + +P++VLNK DL D A + V+ +S+ DG Sbjct: 135 LRRIERYLAVARASEAQPVVVLNKSDLHPDARGAEAEVRRITRTA---PVVTLSAARGDG 191 Query: 198 LKPLEEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 + L L G SG GKS+L+N LLG Q++ T +S G+HTTT L Sbjct: 192 IAALAPWLVPGATVALLGSSGAGKSTLINRLLGKQRQ-DTGPLSHAMNKGRHTTTHRELL 250 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAV 316 P G VID+PG+RE LW ++ + + F E C++ DC H +PGCA+R A+ Sbjct: 251 ALPGGALVIDTPGLRELQLWGVDESAVAETFPEVAALAAECRFPDCTHQREPGCAVRAAL 310 Query: 317 EEGKIAETRFENYHRILESMAQVKTR 342 ++G + TR+ +Y ++ A R Sbjct: 311 DDGTLDPTRWASYEKLQREQAYAARR 336 >UniRef50_C6X5X0 Ribosome small subunit-stimulated GTPase EngC n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5X0_FLAB3 Length = 309 Score = 293 bits (751), Expect = 4e-78, Method: Composition-based stats. Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 20/312 (6%) Query: 41 EGIVISRFGMHADVESAD-GDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGV 91 +G++ G V D G IR + L GD V + + Sbjct: 2 KGLITKSTGSWYQVLEQDTGKFFEARIRGKFKLIKTRLTNPLAVGDHVEFSLEQDDVAW- 60 Query: 92 NVKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQI-VIVSAILPELSLNIIDRYLVAC 148 + + + + L R + IA+NID I + PE SL +DR+L C Sbjct: 61 -----ITHIEPKKNYLIRKSVNLSKEAHIIASNIDVACFIFTLKFPETSLGFLDRFLACC 115 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E I+P+I+ NK+D+L ++ V IY+NIGY+ L +SS++Q L+ L+ L + Sbjct: 116 EAYNIQPLILFNKMDVLSEDEKELVQHIEAIYQNIGYQTLEISSYSQLNLEALQAILKDK 175 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 +S+F G SG GKS+L+NAL + T++IS + G+HTTT A+++ + GG VID+P Sbjct: 176 VSVFFGHSGSGKSTLVNALQP-DLNLKTSEISASQLKGKHTTTFAQMHFWHFGGSVIDTP 234 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE-GKIAETRFE 327 GVREF + ++ E+I F E CK+ +C H +P CA+ ++ G + ETR++ Sbjct: 235 GVREFAMIDVQKEEIQHYFPEIFALGRNCKFHNCMHINEPKCAVTADLDSGGDLEETRYQ 294 Query: 328 NYHRILESMAQV 339 Y +++E + Sbjct: 295 TYLKLMEEAEEN 306 >UniRef50_C6PE63 Ribosome small subunit-dependent GTPase A n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PE63_CLOTS Length = 291 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 89/308 (28%), Positives = 146/308 (47%), Gaps = 26/308 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIV 97 G +I G V + G + C R R + GD V G + Sbjct: 5 GRIIRGIGGFYYVYTEHG-IIECRARGKFRISNIVPIVGDNVDI------DTENLKDGFI 57 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPI 156 +H R + L RP +N+DQ +I +I P L+ +D+ ++ E I P+ Sbjct: 58 INIHNRKNELVRP--------PVSNVDQAIITFSIVNPALNRLQLDKMIILVELNGIHPV 109 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I +NKIDL+ ++ A + ++Y+N+GY V+ S G+ L+ + G+ S F G S Sbjct: 110 ICINKIDLVTEDVFAPL---YNLYKNLGYDVIATSKFDNIGIDKLKAMIIGKTSFFTGPS 166 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKSSL+N + G K+ D+S+ G+HTT L F +G V+D+PG L Sbjct: 167 GVGKSSLINCIQGTNKQ-EIGDLSEKLLRGKHTTRNVELIPFENG-YVLDTPGFTSLNL- 223 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 ++ ++ F +F +Y C+++ C H +P C ++ AV G I + R+ NY + + Sbjct: 224 DIDETELKYYFRDFRNYELDCRFKSCLHINEPDCGVKIAVSNGLIDKIRYSNYLNLYNEL 283 Query: 337 AQVKTRKN 344 K R+ Sbjct: 284 KSNKRRRY 291 >UniRef50_C4L300 Ribosome small subunit-dependent GTPase A n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L300_EXISA Length = 321 Score = 293 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 24/322 (7%) Query: 35 LFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKP 86 + + + G V ++F V D +V+ C + R V GD V + + Sbjct: 1 MNQQTETGRVTAQFQHLYTVSVGD-NVYTCGVSGKFRHAATSERDYPVIGDYVTIQVREH 59 Query: 87 AAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRY 144 +G + + ER +VL+R + + I AN+D ++I A + ++ ++RY Sbjct: 60 G------QGTIHHLLERRTVLSRAAAGNETREQLICANVDYVLITMACGHDFNIRRLERY 113 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 +A PIIVL K D +D + Q++ G +V VS+ T +G+ L A Sbjct: 114 TLAAWDTGAIPIIVLTKTDQVDSVDTLLEDIQVN---APGIQVFPVSAVTGEGVAELRHA 170 Query: 205 LTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 L F G SGVGKS+L NAL + +T + G+HTTT L+ Sbjct: 171 LPSESTIAFVGSSGVGKSTLTNALA-HETLAVTQAVRAQDERGKHTTTHRELFRIDD-LY 228 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 VID+PG+REFGLW E + + F + C++RDC H +PGCA++EA+ G + Sbjct: 229 VIDTPGMREFGLWEGS-EHLDETFRDIEALAETCRFRDCSHQKEPGCAVQEALSSGTLDA 287 Query: 324 TRFENYHRILESMAQVKTRKNF 345 R+ +Y ++ + ++ ++ Sbjct: 288 KRYASYVKLERELLYMEKKQAE 309 >UniRef50_C5CF78 Ribosome small subunit-dependent GTPase A n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF78_KOSOT Length = 300 Score = 292 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 113/308 (36%), Positives = 178/308 (57%), Gaps = 25/308 (8%) Query: 42 GIVISRFGMHADVE-SADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVN 92 GIVI+ V DG+ C +R + +V GD V ++P + Sbjct: 3 GIVINVQKGLYKVRPVNDGEDINCTLRGRLFKQSQTTKSMVVVGDYVEFQP------VLG 56 Query: 93 VKGIVEAVHERTSVLTRPDFYDG----VKPIAANIDQIVIVSAI-LPELSLNIIDRYLVA 147 +G++ A+ ER S L R + +AAN+DQ ++V A+ P+ N+I+RY+V+ Sbjct: 57 GRGVITAIEERKSKLVRKGAGKKGSHLEQVVAANVDQAILVFAVKNPKYRKNLIERYIVS 116 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 + IEP+I NKIDL++ ++ V E + R +GY VL+ S+ T +G+K L+ L Sbjct: 117 AKYGGIEPVICFNKIDLIN---LSEVQEDIKECRKLGYTVLLTSTITGEGIKKLKSLLKD 173 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 +IS+FAG SGVGKSSL+NA+ +K+ TN++S + G+HTTT++++Y P GG +ID Sbjct: 174 KISVFAGSSGVGKSSLVNAIFN-EKKTKTNEVSTSHYKGKHTTTSSQVYELPFGGRIIDV 232 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+REFG+ I F + + CK+RDC H +PGCA++EA+E G + E R+ Sbjct: 233 PGMREFGVID-NGTGIRDAFPDIIELAKHCKFRDCNHINEPGCAVKEAIESGLLEERRYR 291 Query: 328 NYHRILES 335 NY ++ +S Sbjct: 292 NYLKLKKS 299 >UniRef50_C6WWG3 Ribosome small subunit-dependent GTPase A n=4 Tax=Betaproteobacteria RepID=C6WWG3_METML Length = 325 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 164/300 (54%), Gaps = 14/300 (4%) Query: 41 EGIVISRFGMHADVE-SADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 +G V++ +G VE + C R L GD V+ + +G+VE+ Sbjct: 36 QGTVVAAYGKRYQVELTDTKQRISCVTRGKKTDLACGDFVLVKLTDK------EEGVVES 89 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL 159 R ++L R + + K +AAN+ QI+IV A P +++R L+A E I+ +IVL Sbjct: 90 TLPRKTLLFRSNAFKS-KMLAANVTQIIIVLATQPSFYEALLNRCLIAAEAAGIKALIVL 148 Query: 160 NKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVG 219 NK DL D+ ++++Y +GY+VL +S+ + L L +SI GQSG+G Sbjct: 149 NKCDLTDNHD---ALRKLELYSKLGYQVLPLSAKLD--ISSLRPYLQDEVSILVGQSGMG 203 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KS+++NALL + + T ++S G+HTTTAA LYH +IDSPG++EFGL HL Sbjct: 204 KSTIINALLPSEA-VRTQEVSHVLDSGKHTTTAAHLYHLDASSQLIDSPGLQEFGLHHLN 262 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 +++ F+EF +LG C++ +CKH +P CAI EA+ + KI+ R Y + ++ Sbjct: 263 TDELEHAFIEFRPFLGKCRFNNCKHLQEPDCAITEALSQDKISAERLAIYKMLRTEISHQ 322 >UniRef50_C9RJ19 Ribosome small subunit-dependent GTPase A n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ19_FIBSS Length = 410 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 121/373 (32%), Positives = 186/373 (49%), Gaps = 47/373 (12%) Query: 3 KNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVH 62 + + + R +R+K E ++ + EG+V+ +V D + Sbjct: 43 ERPIKERFSREFKKAKIKRIKNPVENIGEENCV-----EGLVLEVHRRTCEVRLDDRTLA 97 Query: 63 RCNIRRTIRS-------------------------------LVTGDRVVWRPGKPAAEGV 91 + RR + GDRV+ A + Sbjct: 98 DASYRRETKENTPLSSLDSRLSSNTVTAMYRATTSKTLGEFPAVGDRVLLGLVNDADDEG 157 Query: 92 NVKG----IVEAVHERTSVLTRPDFYD---GVKPIAANIDQIVIVSAI-LPELSLNIIDR 143 + G V V R S L RP D + +AANIDQ+VIV+++ PE + +DR Sbjct: 158 DGVGSQKYCVVRVLPRKSELKRPGPRDSFYKQQTLAANIDQVVIVASVTQPEFNYGFMDR 217 Query: 144 YLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEE 203 +L+A + ++VL K+DLL + A ++ + + I +V+ VS + DGL+ L Sbjct: 218 FLLAANLNDLPFVLVLTKMDLLPNGE-ADLSSDIRDFMKIVDKVIPVSVKSGDGLEVLRN 276 Query: 204 ALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 L G+ S+F+G SGVGKS+L+N L+ E+ T D+ + G G+HTTT++ L+ FP GG Sbjct: 277 ELVGKSSVFSGMSGVGKSTLINELVP-HAELRTGDVRERDGKGRHTTTSSSLFDFPGGGY 335 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEF-HDYLGLCKYRDCKHDTDPGCAIREAVEEGKIA 322 VID+PG+R GL +EPE + + F F D L CK+ +CKH +PGCA+R AVE GKI+ Sbjct: 336 VIDTPGIRSIGLMDMEPETLAKIFPGFFEDDLFTCKFSNCKHLKEPGCAVRAAVESGKIS 395 Query: 323 ETRFENYHRILES 335 E R+ +Y RIL S Sbjct: 396 EARYASYVRILNS 408 >UniRef50_A1ZFA4 Ribosome small subunit-dependent GTPase A n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFA4_9SPHI Length = 357 Score = 291 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 85/333 (25%), Positives = 156/333 (46%), Gaps = 28/333 (8%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWR 82 + ++ + G V + + S+ G++ + I ++ GD V + Sbjct: 20 FTNSEAQGFEAGRVAIENKNNYTIFSSQGEL-KGEISGRLQYTAHSEADLPKVGDWVSMQ 78 Query: 83 PGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNI 140 + + I+ V R++V TR + IAANID ++IV + +L Sbjct: 79 V-------FDQQAIIHGVLPRSTVFTRNAAGKRNQAQVIAANIDYLLIVQSADQNYNLRR 131 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG--YRVLMVSSHTQDGL 198 ++RYLV I P++VL+K+DL D ++M+ ++ V+ VS+ + G Sbjct: 132 LERYLVMAAEGGIAPVVVLSKVDLATD-----WQQKMEELQSFDADLPVISVSNTSAIGY 186 Query: 199 KPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 K L + + + G SGVGKS+L+N LL + T + D G+HTTT ++ Sbjct: 187 KALSQWIKPGKTLAVVGSSGVGKSTLINHLLDT-PQQATQTVRDKDDKGKHTTTRREMFI 245 Query: 258 FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVE 317 +G +ID+PG+RE LW + I Q F + C + DC H + CA+ A++ Sbjct: 246 TQNGSILIDTPGMRELQLWE-SKQGIGQVFTDVEVLAQDCHFGDCSHTNEIKCAVLAALD 304 Query: 318 EGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 G+++E R+++Y ++ + +++ +F D Sbjct: 305 SGELSEERYQSYLKLQKEADYLESSADFLRKKD 337 >UniRef50_B1KX53 Putative ribosome biogenesis GTPase rsgA n=32 Tax=Clostridium RepID=RSGA_CLOBM Length = 292 Score = 291 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 83/309 (26%), Positives = 162/309 (52%), Gaps = 25/309 (8%) Query: 41 EGIVISRFGMHADVE-SADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKG 95 +G +I G ++ ++ C R R + GD V K N KG Sbjct: 2 KGTIIKGIGGFYYIKIDNSEEIIECKARGKFRHTELTPMIGDYVEISVDK------NNKG 55 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 +E ++ER S L RP AN+ Q ++V + P++++++++++L+ CE ++ Sbjct: 56 AIEKIYERRSELFRPA--------VANVTQALVVFSFKNPDINIDLLNKFLLLCEYNNLK 107 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 I+ NK+DL++ E + + + GY ++ +++ + + +++ + +++F G Sbjct: 108 AIVCFNKMDLVNKED---YKDIISMIEQAGYDIIFLNAKEERNMDIIKKLIKDNVTVFCG 164 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SGVGKS++LN ++G + ++T +IS+ G+HTT + L + G ++D+PG Sbjct: 165 PSGVGKSTMLNKIIGKE-TMITGNISEKLKRGKHTTRHSELIYVDEGL-LVDTPGFSSLD 222 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 + +E E + EF D++G CK+ C H +P CA+++AVEEG I + R++ Y + LE Sbjct: 223 INFMEKEDLLHCIPEFRDFIGECKFTGCLHHREPNCAVKKAVEEGHIHKNRYDFYIKTLE 282 Query: 335 SMAQVKTRK 343 + +K Sbjct: 283 EFMNRRKKK 291 >UniRef50_C9LUJ5 Ribosome small subunit-dependent GTPase A n=2 Tax=Selenomonas RepID=C9LUJ5_9FIRM Length = 300 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 103/314 (32%), Positives = 171/314 (54%), Gaps = 26/314 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 +G V+ V + +G + +R ++ +V GD V + A Sbjct: 7 LLQGKVLRAQNSFFYVATREG-LVEAKLRGRLKKERIAVVPGDDVELELTEGGA------ 59 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G++E ER S+L RP + ANIDQ+V+V A P+++ +IDR+LV E +I Sbjct: 60 GVIERRCERKSLLRRP--------LVANIDQVVLVFAAREPDINPVLIDRFLVLAEWSKI 111 Query: 154 E-PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 E ++ +NK+DLL+ + A + +YR IGY V ++S+ T +G+ ++ + + S+F Sbjct: 112 ERIVLCINKMDLLEGDE-AEIPALAALYREIGYPVCLLSTVTGEGVADMQSLVEEKTSVF 170 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SGVGKSSLLN L + T +S+ G+HTT A+L F GG ++D+PG Sbjct: 171 AGSSGVGKSSLLNCLAPG-IALSTGAVSEKIKRGRHTTRTAQLLPF-AGGFLVDTPGFSA 228 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 L +EP + F EF + G C+++ C H +PGCA++EAV+ G+I ++R+ +Y + Sbjct: 229 TELAEIEPCALPGLFPEFRSFFGACRFQPCTHSHEPGCAVKEAVQAGRIEDSRYASYLEM 288 Query: 333 LESMAQVKTRKNFS 346 L+ V+ +K + Sbjct: 289 LQ--QSVQRKKVYR 300 >UniRef50_B0K1Y6 Ribosome small subunit-dependent GTPase A n=14 Tax=Clostridia RepID=B0K1Y6_THEPX Length = 293 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 94/298 (31%), Positives = 151/298 (50%), Gaps = 25/298 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 EG ++ V + G + C R R + GD V + + + Sbjct: 3 RIEGRIVRGIAGFYYVATEHG-IVECRARGKFRKDNVTPLVGDIVEIQMIN------DSE 55 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G + + R + L RP AN+DQ +IV AI PE++ ++D+ +V E+ I Sbjct: 56 GYILNILPRKNELIRP--------PIANVDQAIIVFAIAKPEINRVLLDKMIVLAESNDI 107 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 EPII +NK+DL +D + + IY+ IGY+ + S T+DG+K L+ L ++S FA Sbjct: 108 EPIICINKVDLKEDRE---AFDLVTIYQKIGYKAVTTSVVTKDGIKELKSYLKDKVSFFA 164 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKSSL+N++ ++ T ++S+ G+HTT + L GG V+D+PG Sbjct: 165 GPSGVGKSSLINSI-QSNIKLKTGEVSEKLLRGRHTTRSVELLSLDFGGYVLDTPGFTAL 223 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 L ++ + + F EF + CK+ C H +P C I +AV+EG I + R+ +Y Sbjct: 224 TL-DIDNQDLRYYFREFLELQRGCKFSSCLHVNEPDCNIIKAVKEGLIDKNRYLSYLS 280 >UniRef50_B9K7Z8 Putative ribosome biogenesis GTPase rsgA n=7 Tax=Thermotogaceae RepID=RSGA_THENN Length = 295 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 172/304 (56%), Gaps = 24/304 (7%) Query: 39 PDEGIVISRFGMHADVESAD-GDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNV 93 GIV+S VE + G+ C +R R + GDRV + P + Sbjct: 4 RRRGIVLSFHSNMVTVEDEETGERLLCKLRGKFRLQNLKIYVGDRVEYTPDGTGS----- 58 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQ 152 G++E V R ++L KP AN+DQ I++V+ +PE S IID++LV E + Sbjct: 59 -GVIENVLHRKNLLV--------KPHVANVDQAILVVTVKMPETSTYIIDKFLVLTEKNE 109 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 +E ++V+NK+D+ D+E + V E IY + Y ++ S+ T G++ L++ L G+IS Sbjct: 110 LETVLVINKMDIYDEEDLEKVKELERIYSKL-YPIVKTSAKTGMGIEELKKYLKGKISTM 168 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SGVGKSSLLNA+ ++ +++S G+HTTT+A+L F GG V+D+PG Sbjct: 169 AGLSGVGKSSLLNAINPG-LKLRVSEVSQKLQRGRHTTTSAQLLRFDFGGYVVDTPGFAN 227 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + +EPE++ F EF++ C + DC H +P C ++EAVE G+IAE+R+ENY ++ Sbjct: 228 LEIGDIEPEELKYYFKEFNE--KQCFFSDCNHIDEPECGVKEAVENGEIAESRYENYVKM 285 Query: 333 LESM 336 + Sbjct: 286 FHEL 289 >UniRef50_B2JF36 Putative ribosome biogenesis GTPase rsgA n=56 Tax=Betaproteobacteria RepID=RSGA_BURP8 Length = 317 Score = 289 bits (741), Expect = 7e-77, Method: Composition-based stats. Identities = 113/318 (35%), Positives = 175/318 (55%), Gaps = 14/318 (4%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGD-VHRCNIRRTIRSLVTGDRVVWRPGKP 86 + ++ + G+VI+ G H V DG + +C R + GD+V++ P Sbjct: 10 RAATANDRAQDRVRGLVIAAHGRHYIVAPEDGSAILQCFPRGKRSEIAVGDQVLYEPTSA 69 Query: 87 AAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 +G++ + ER ++L R D Y K AAN+DQ++IV A P S +++ R LV Sbjct: 70 ------DQGVIVEIGERRNLLYRSDQYKS-KLFAANLDQLLIVLATEPHFSEDLLGRALV 122 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHT--QDGLKPLEEA 204 A E +++P+IVLNKID+ + + +++ +YR +GY VL VS LE Sbjct: 123 AAEENELKPLIVLNKIDV--EAALPLARKRLQLYRGLGYTVLEVSIKGQPDAARATLEAH 180 Query: 205 LTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH-GGD 263 L G ++ GQSG+GKS+L+N L+ E+ T +IS G+HTTT RLY P G Sbjct: 181 LNGHSTLLLGQSGMGKSTLVNLLIP-DAEVATREISTALNSGRHTTTFTRLYPLPGSEGA 239 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 +IDSPG +EFGL HL ++ + F EF L C++ +C H +PGCAI EAV +G+IA+ Sbjct: 240 LIDSPGFQEFGLHHLTEGKLERAFPEFRPLLAECRFYNCHHLHEPGCAILEAVADGRIAK 299 Query: 324 TRFENYHRILESMAQVKT 341 R Y +++ +Q+ Sbjct: 300 ERHALYAQLVHEASQIVR 317 >UniRef50_Q8TKG2 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Methanomicrobia RepID=RSGA_METAC Length = 369 Score = 289 bits (741), Expect = 7e-77, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 157/318 (49%), Gaps = 18/318 (5%) Query: 34 NLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTI----RSLVTGDRVVWRPGKPAAE 89 G G + SR +V G V + I + + V GD VV + Sbjct: 35 AYKGLYLAGRISSRHKTVCEVLVP-GAVVQAGISGALQRIGKQPVVGDFVVL-----LDQ 88 Query: 90 GVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 +V + R + L+R G + IAAN+D I IV+++ +L+L ++RYL Sbjct: 89 PETGSRMVVNILPRRTCLSRGAAGDGGGEQLIAANLDTIFIVTSVGKDLNLRRLERYLAI 148 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 + P+I+LNKIDL DD A + E++ V+ +S+ ++ GL L L Sbjct: 149 VYSSGASPVILLNKIDLADDP--ARLVEKIRDVTG-DVPVIPLSALSKTGLDALGPYLNP 205 Query: 208 -RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 G SGVGKS+L+NA LG + T DI + G+HTTT +++ P+G +ID Sbjct: 206 GETVALVGSSGVGKSTLINAFLGETVQ-KTADIRKDDEKGRHTTTVRQMFLLPNGAVLID 264 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG+RE L E + + F E D CK++DC H +PGCA+ +AV +G I E R Sbjct: 265 NPGIREIQLGD-SAEGLEKAFSEIVDAARNCKFKDCTHRNEPGCAVLQAVRDGIIPEERL 323 Query: 327 ENYHRILESMAQVKTRKN 344 E+YHR+ + ++ + Sbjct: 324 ESYHRLTDELSFQSKKAE 341 >UniRef50_A9KMS1 Ribosome small subunit-dependent GTPase A n=4 Tax=Clostridium RepID=A9KMS1_CLOPH Length = 359 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 88/334 (26%), Positives = 166/334 (49%), Gaps = 32/334 (9%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWR 82 +++ V + ++ S G+ ++ ++ GD V+ + Sbjct: 17 TANDIELSLIPARVSAVHKESYELISEYGES-NAKLKSSLFYKNSKYLIYPAVGDFVLIK 75 Query: 83 PGKPAAEGVNVKGIVEAVHERTSVLTRPDFY-------DGVKPIAANIDQIVIVSAILPE 135 + + I+ + R S TR + +G++ IA+N D + ++ ++ + Sbjct: 76 HNELGDD------IIYRILNRKSYFTRNNPGFGNYTGNEGLQSIASNFDYVFLMESLNQD 129 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYR--NIGYRVLMVSSH 193 ++ ++RYL PII+L K DL DD V+E++ I + G +V+ +S+ Sbjct: 130 FNVRRMERYLSTAYDSGATPIIILTKADLCDD-----VSEKIAIMEQVSFGVKVVAISAI 184 Query: 194 TQDGLKPLEEALTGRIS-IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTA 252 T +GL L E LT + +F G SG+GKSSL+NAL G + + ++I ++ G+HTTT Sbjct: 185 TGEGLDQLVEYLTEGTTFVFLGSSGIGKSSLVNALAGKE-MMKVSNIREDDDKGRHTTTH 243 Query: 253 ARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAI 312 L +G +ID+PG+RE GL ++E ++ F + CK++DCKH+ +PGCA+ Sbjct: 244 RELISLENGVMIIDTPGMRELGLSNVES-GLSSTFQDIDSLSEYCKFQDCKHEKEPGCAV 302 Query: 313 REAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 +A+E+G ++ R +YH++ + + + Sbjct: 303 NKAIEDGTLSLDRLRSYHKLQREVRHSSAKAAYQ 336 >UniRef50_Q2YB53 Putative ribosome biogenesis GTPase rsgA n=6 Tax=Betaproteobacteria RepID=RSGA_NITMU Length = 313 Score = 289 bits (740), Expect = 9e-77, Method: Composition-based stats. Identities = 113/313 (36%), Positives = 175/313 (55%), Gaps = 12/313 (3%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPA 87 + ++ P G +++ FG H V++AD C +R GD V Sbjct: 2 RSPGRPSVTSPPLRGEIVAAFGRHFLVKTADESTLTCVLRGKKSGAACGDWVEI------ 55 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 + + +G++E + R+++L R D K IAAN Q++IV A +P S +I+R LVA Sbjct: 56 YQTASEQGVIERILPRSALLYRSDL-SREKLIAANATQVIIVVAPVPSFSEELINRCLVA 114 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 E+ Q+ +IVLNK DLL +A + +YR + Y +L +S+ +KPL L Sbjct: 115 AESQQLSVLIVLNKTDLLGPSKVAL--NGLSLYRELDYTLLPISARND--VKPLLPYLED 170 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 +S+ GQSG+GKS+++NAL+ E T DIS G+HTTT ARLYH +IDS Sbjct: 171 NLSVLVGQSGMGKSTIINALVP-DAERATGDISPTLDAGRHTTTHARLYHLDRNARIIDS 229 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+++FGL HL E I GF EF Y+G CK+ +C+H +PGCA+ A+ E +++ R + Sbjct: 230 PGIQQFGLQHLSIEAIAWGFREFRPYIGKCKFNNCRHSGEPGCALANAMRESEVSVRRID 289 Query: 328 NYHRILESMAQVK 340 YH+++ S+ + Sbjct: 290 LYHKLIASLNTNR 302 >UniRef50_A9WK24 Ribosome small subunit-dependent GTPase A n=6 Tax=Chloroflexi (class) RepID=A9WK24_CHLAA Length = 324 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 111/312 (35%), Positives = 158/312 (50%), Gaps = 25/312 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS-------LVTGDRVVWRPGKPAAEGVNVK 94 G V+ V++ G V C +R ++ +V GD+V P N + Sbjct: 24 GTVLRAQSGFFWVQTEQG-VLECRLRGRLKKERQATDLVVIGDQVEVMP------VGNGQ 76 Query: 95 GIVEAVHERTSVLTR----PDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACE 149 G +EAV R S L R P I AN+DQ+++V + PE + ++DRYLV CE Sbjct: 77 GAIEAVLPRRSRLARRAAGPRGAYKEDVIVANVDQVLLVFSCTKPEFTPRMLDRYLVICE 136 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 ++ +IV KIDL+ Y IGY V S + +G+ L L GRI Sbjct: 137 HSELPVVIVATKIDLV---VQHAAEAMFSPYARIGYPVFYTSIVSGEGIAELRSQLAGRI 193 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF--PHGGDVIDS 267 S+ G+SGVGKSSLLNA+ + T +IS+ G+HTTT A L P GG V D+ Sbjct: 194 SVVTGKSGVGKSSLLNAIQPG-LNLRTGEISERLTKGRHTTTVAELIPLDLPGGGYVADT 252 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+RE GLW++ + F EF +L C + C H +P CA+R AVE G I R++ Sbjct: 253 PGIREIGLWNVPERDLAWCFREFRPFLDDCYFAGCTHLHEPHCAVRAAVERGDITAARYD 312 Query: 328 NYHRILESMAQV 339 +Y R++ES + Sbjct: 313 SYARLMESEDEE 324 >UniRef50_A5WDM1 Ribosome small subunit-dependent GTPase A n=4 Tax=Moraxellaceae RepID=A5WDM1_PSYWF Length = 374 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 134/383 (34%), Positives = 202/383 (52%), Gaps = 62/383 (16%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESAD-- 58 + + KL+K Q RR++ +++ G +G+V++ +G +V+ Sbjct: 4 IRQRKLTKQQLRRIDKQQ----------AQQQESIDGSLMDGVVMAHYGKQLEVQVTSLP 53 Query: 59 -----------------------GDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 GD+ RC++R + + TGD+V W A+ G Sbjct: 54 TLIPERPEVVEGEPEPFWQAIELGDIWRCHVRTNLPMIATGDKVRW-----VADPNTGFG 108 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEP 155 +E+V RTS+++RPD Y +KP+AAN+D + IV A LP + N+IDRYLV C ++P Sbjct: 109 RIESVQPRTSLISRPDRYHKLKPVAANVDILAIVFAPLPAAAPNLIDRYLVVCHHADVKP 168 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS----------------HTQDGLK 199 ++VLNK DLL E AF +D Y+N+GY ++ ++ Q GL Sbjct: 169 LLVLNKADLLSIEDYAFTQALLDEYQNLGYETVLTAAPCPENILHGAQSEDQPKAQLGLS 228 Query: 200 PLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L++ + ++ IFAGQSGVGKS+L+NALL E N IS NS LGQHTTT +RL F Sbjct: 229 DLQQKIKDKLVIFAGQSGVGKSTLVNALLP-DSEQSVNVISTNSKLGQHTTTTSRLLPFN 287 Query: 260 HG----GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHD-TDPGCAIRE 314 G ++D+PG+RE+G+WHL P+ I GF+E C++RDCKH GCA+ E Sbjct: 288 RDDLTQGGIVDTPGIREYGIWHLTPDDIIAGFIELSALAADCQFRDCKHTYNSKGCALWE 347 Query: 315 AVEEGKIAETRFENYHRILESMA 337 AV EG++ + R E+ + Sbjct: 348 AVAEGRVLQRRVESLVTLQAEAD 370 >UniRef50_Q03FX9 Putative ribosome biogenesis GTPase rsgA n=25 Tax=Lactobacillales RepID=RSGA_PEDPA Length = 309 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 101/320 (31%), Positives = 156/320 (48%), Gaps = 25/320 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVK 94 G +I DV + D + R R R S + GD V ++ E N Sbjct: 1 MHTGQIIQLLAGFYDVLTEDHKIVRTRARGNFRNQKTSPLVGDMVDFK------ESENDT 54 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G + +H R + L RP ANIDQ VIV+A P S N++DR LVA I Sbjct: 55 GYITKIHTRENELVRPPL--------ANIDQAVIVTAATEPSFSANLLDRQLVALAEKHI 106 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLM-VSSHTQDGLKPLEEALTGRISIF 212 E I+ +K DLL + + Y+ IGY+V+ +SS L L+E+ +++IF Sbjct: 107 EAILYFSKTDLLSPTEFQDLQKIAGYYQKIGYQVIFPISSQPDADLIELKESFKNQLTIF 166 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 GQ+G GKS+LLN + + I T ++S G+HTT L G V D+PG Sbjct: 167 MGQTGAGKSTLLNRI-DSKLNIATGEVSQALNRGKHTTRKVSLIPIEDGL-VADTPGFST 224 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + ++ + Q+ + F++F C++R+C H +PGCA++ AVE+G + +R+ NY + Sbjct: 225 YAVFEMADTQLKEYFIDFKKLSQNCRFRECLHLNEPGCAVKAAVEDGSVLSSRYANYEQF 284 Query: 333 LESMAQVK---TRKNFSDTD 349 +E + K RK + D Sbjct: 285 IELIRNQKPEYKRKGYQKKD 304 >UniRef50_A5EV96 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Cardiobacteriaceae RepID=RSGA_DICNV Length = 316 Score = 288 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 110/334 (32%), Positives = 169/334 (50%), Gaps = 20/334 (5%) Query: 4 NKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHR 63 +KLS QQRR++ + Q +L D +V++ G V G++ Sbjct: 2 SKLSHQQQRRIHNHRQNKLAAGDRA-----------DAALVVAHLGYQLIV-DDHGEILA 49 Query: 64 CNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANI 123 + R+ + ++ DRV+ +P IVE ++ R L +KP+A+NI Sbjct: 50 ADWRQKLGAIAVNDRVLITRDQP------QHAIVEGIYPREKTLY-KQHAGKLKPVASNI 102 Query: 124 DQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI 183 DQ++I A +P+ ++DR+LVA IEP NK DL D + A ++ IY + Sbjct: 103 DQLLITFAPVPDWQNALLDRFLVAAHQAHIEPAFFCNKSDLFDAQTFAAAENRLAIYHQL 162 Query: 184 GYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNS 243 GYRV S + + GL+ L L+GR ++ GQSGVGKSS ++ L+ ++ T +S Sbjct: 163 GYRVFYGSIYQKTGLEELTHWLSGRQTVICGQSGVGKSSFIHYLMP-DIDVWTQAVSAAR 221 Query: 244 GLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 G GQHTT AR Y +ID+PGVR F L HL+ ++ GF E H Y C++ DC Sbjct: 222 GFGQHTTRNARRYPLDAHTAIIDTPGVRGFSLTHLQHSEVVSGFPEIHQYTHECRFNDCS 281 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 H +P C ++ A+E G I+ RF + +I Sbjct: 282 HQHEPDCGVQRALERGDISLERFNSMMQICAERE 315 >UniRef50_Q8ETB7 Putative ribosome biogenesis GTPase rsgA 1 n=1 Tax=Oceanobacillus iheyensis RepID=RSGA1_OCEIH Length = 351 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 88/348 (25%), Positives = 163/348 (46%), Gaps = 26/348 (7%) Query: 14 VNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS- 72 +N Q+ + D +L V+ +++ +G ++ +R Sbjct: 3 LNEFQQKYAYRKEINYDGQIDLL-----ARVVMEQKERYILQTING-FKPAVVKGKMRHE 56 Query: 73 -------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP--DFYDGVKPIAANI 123 GD VV + I++ V R S + R + +A+N+ Sbjct: 57 AISREDYPAVGDWVVLQEKDFNDIV-----IIDQVLPRFSSIVRKVAGLRTDAQIVASNV 111 Query: 124 DQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI 183 ++ IV + +L+ ++RYL A P IV +K+DL D M + E D Sbjct: 112 TKVFIVISADEDLNERKLERYLTAVWESGASPHIVFSKVDLASD--MDSIIEHADSI-AF 168 Query: 184 GYRVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 G + ++ ++G + + + + G SG GKS+L+NALL +K + T + ++ Sbjct: 169 GIPLYKWNATNEEGKEDILANIHEDDSVVLIGSSGAGKSTLINALL-TEKVLKTGSVRED 227 Query: 243 SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDC 302 G+HTTT L++ P GG +ID+PG+RE LW + + ++ F + + + CK+ DC Sbjct: 228 DKRGRHTTTHRELFNLPTGGVIIDTPGMRELQLWTEDGDTLSHTFSDINHLIAECKFTDC 287 Query: 303 KHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 KHDT+P CA++EA+E G + E R+ +Y ++ +A ++ ++N + Sbjct: 288 KHDTEPDCAVKEALETGDLEEGRWNSYLKLQRELAYIERKQNAKLATE 335 >UniRef50_Q6ANG3 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ANG3_DESPS Length = 357 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 26/327 (7%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNI--------RRTIRSLVTGDRVVWRPG 84 D+ GE VI V + +G V R + T + V GD +V P Sbjct: 21 DSHTGENIPARVIRGDRGSMLVATTNG-VLRAKPSARFLKANKGTTKLPVVGDWLVAFPS 79 Query: 85 KPAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIID 142 + EAV +R S++TR + +AANID + IV I E +L ++ Sbjct: 80 DTPNVL-----LFEAVLKRKSLITRGSAGKTSGAQALAANIDTVFIVHPIAEEPNLRRME 134 Query: 143 RYLVACETLQIEPIIVLNKIDLL--DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKP 200 R L P+++L K DL D + V +G ++ +V+S T + + Sbjct: 135 RELSVAWDSGATPVVLLTKADLAADPDATLEMVKSV-----AMGVKIALVNSKTAEAAEL 189 Query: 201 LEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L +T ++ G SG GKS+L+N+L G +++ T + + G G+HTT A L Sbjct: 190 LRSYITGYLTAVLIGPSGAGKSTLVNSLAGTERQ-ATGAVREGDGKGRHTTVARELIQIS 248 Query: 260 HGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEG 319 G +ID+PG+R GL E I+Q F + + C++RDC H + GCA+ A E G Sbjct: 249 GHGIIIDTPGIRAIGLTG-STEGISQVFPDIEELSHSCRFRDCSHTEETGCAVTAAAESG 307 Query: 320 KIAETRFENYHRILESMAQVKTRKNFS 346 +++ R +Y ++++ + + ++ Sbjct: 308 QLSLERLASYLKLVQEVQEAAQKEEAQ 334 >UniRef50_A7HNP9 Ribosome small subunit-dependent GTPase A n=5 Tax=Thermotogaceae RepID=A7HNP9_FERNB Length = 302 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 110/315 (34%), Positives = 175/315 (55%), Gaps = 27/315 (8%) Query: 35 LFGEPDEGIVISRFGMHADVES-ADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAE 89 GIV+ + VE G+ C +R + +TGD V + + Sbjct: 7 NKALRRRGIVVKFYSNLLVVEDIETGEQFLCKLRGKFKKQGIRPITGDIVEY------TK 60 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVAC 148 V +G+VE + R S L +P ANIDQ++IV+ I P + L+I+DR++V Sbjct: 61 IVGNEGVVENILNRKSELKKPS--------VANIDQVIIVTTIDKPAVPLDILDRFIVLV 112 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 E + +IVLNK+DLL +E + E IY+ + Y V+ S+ T G++ L++ L+G+ Sbjct: 113 EYEGLPIVIVLNKVDLLKEEQ---IKEFESIYKKL-YPVVKTSAMTGYGIEELKQQLSGK 168 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 IS+FAG SGVGKSSLLN++ ++ T +IS+ G G+HTTTAA L GG V+D+P Sbjct: 169 ISVFAGMSGVGKSSLLNSI-ENNLKLRTGEISEKLGRGKHTTTAAELLRLSFGGWVVDTP 227 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G + H+ + + F+EF + C + DC H +PGC ++E V++GKI +R+E+ Sbjct: 228 GFASLDIDHISENILRELFIEFEN--DKCYFPDCYHIDEPGCHVKEMVKKGKIPYSRYES 285 Query: 329 YHRILESMAQVKTRK 343 Y R+LE + +++ Sbjct: 286 YQRMLEELQELRKEA 300 >UniRef50_C4ZNY5 Ribosome small subunit-dependent GTPase A n=3 Tax=Betaproteobacteria RepID=C4ZNY5_THASP Length = 314 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 120/321 (37%), Positives = 182/321 (56%), Gaps = 19/321 (5%) Query: 27 EKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKP 86 K + + +G+V++ FG H +V++A G + +C R S GD V PG Sbjct: 2 RKRTHAGAIAEARIDGVVVAAFGRHYEVDTARGRL-QCYPRGKKSSYACGDEVELVPGG- 59 Query: 87 AAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 + +G++E +H R ++L R D + K IA+N+ +VIV A P S ++ R + Sbjct: 60 -----DGQGVIETLHPRRNLLWRSDAF-REKLIASNLSHLVIVVATEPGFSDLLVSRCIA 113 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 A E+ I P+IVLNK DL + Q++ +R +GY V+ VS+ G L L Sbjct: 114 AAESQGIVPLIVLNKADLA--ARLEAARHQLEPFRKLGYEVVEVSAL--QGADALRARLA 169 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP------H 260 G +IF GQSG+GKS+L NA++ + + T +ISD G+HTTT ARLYH P Sbjct: 170 GLQAIFVGQSGMGKSTLTNAIVP-EAQAATREISDALDSGKHTTTFARLYHLPVTADEAR 228 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 GG +IDSPG++ FGL HL E + + FVE +LG C++RDC+HD++PGCA+ A+E G Sbjct: 229 GGWLIDSPGLQVFGLAHLAAEDLAETFVELRPHLGRCRFRDCRHDSEPGCALLGALEAGA 288 Query: 321 IAETRFENYHRILESMAQVKT 341 I R+E++ I +A+ + Sbjct: 289 IHPRRWEHFRAIRSEIAEARR 309 >UniRef50_C6W757 Ribosome small subunit-dependent GTPase A n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W757_DYAFD Length = 354 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 91/323 (28%), Positives = 147/323 (45%), Gaps = 23/323 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTI-------RSLVTGDRVVWRPGKPAAEGV 91 + G V + G + SA G V + + GD V ++ Sbjct: 25 LEPGRVTAIEGFRHRLVSASGQV-DALLSGALMNGANHWELPKVGDWVAFK-------NY 76 Query: 92 NVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACE 149 + +GI+ +V R + L+R P + IA NID IV + + + + RY+V Sbjct: 77 DNEGIIISVLPRANELSRKMPGRTTEKQVIATNIDTAFIVQGLDRDFNPMRLQRYIVQIM 136 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL--EEALTG 207 I P+++LNK DL+ D Y VL++S+ ++GL+ E+ L G Sbjct: 137 QCNIRPVVLLNKQDLVADPEYYRQQVTALGYE---CPVLLLSATGREGLQQWANEQLLPG 193 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 + + G SGVGKS+L+NALLG + + +SD + G+HTT + L P G +IDS Sbjct: 194 QTYVLIGSSGVGKSTLVNALLGYRLQ-EEGSVSDFNHKGRHTTVSRNLVMLPSGAMLIDS 252 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG+REFG+ +Q C++ DC H +PGCAI AV+ G++ ++ Sbjct: 253 PGMREFGVTLDADDQGMHYHPLLAALAADCRFHDCTHLHEPGCAITAAVQSGELPREVYD 312 Query: 328 NYHRILESMAQVKTRKNFSDTDD 350 +Y +I A + + Sbjct: 313 SYLKISREQAHYQGDSIEKKRAE 335 >UniRef50_A1R8G6 Ribosome small subunit-dependent GTPase A n=3 Tax=Arthrobacter RepID=A1R8G6_ARTAT Length = 395 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 16/326 (4%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPA 87 + G ++ V SA+ +H TGD V Sbjct: 41 RAHAAPEGQETAIPGRIVRLDRNRLLVASANDLLHLPYPSH-GHVPATGDWVWL-----G 94 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFYD---GVKPIAANIDQIVIVSAILPELSLNIIDRY 144 +VE V R S L+R Y+ + + +NID + +V + L+ N ++R Sbjct: 95 HNTAGEPAVVE-VLPRHSALSRKRAYEASSEEQILGSNIDIVAVVVPVDRPLTHNRLERT 153 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 LVA P++V+ K DL + + G V+ S+ DGL L + Sbjct: 154 LVAAWDSGATPLVVITKADLAHLADDVVGEVIL---QAGGVDVVTTSAEQGDGLDELMQH 210 Query: 205 LTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 + + G SG GKS+L+NAL G + + T + G G+HTTT+ L G Sbjct: 211 IPDGATLVLLGPSGAGKSTLINALAGREVQ-QTGAVRAGDGKGKHTTTSRELVPLAGGAV 269 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 ++D+PGVR FGL+ + E + + F + D C++ DC H +PGCA++EA+ E + Sbjct: 270 LMDTPGVRGFGLFDAD-EGMEEMFGDLEDLFSRCRFTDCAHQAEPGCAVQEALAEENLDP 328 Query: 324 TRFENYHRILESMAQVKTRKNFSDTD 349 R+ +Y ++ +A + + + + Sbjct: 329 RRWASYLKLQRELAALARKHDAAARR 354 >UniRef50_UPI0001789FEF GTPase EngC n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789FEF Length = 357 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 87/331 (26%), Positives = 144/331 (43%), Gaps = 30/331 (9%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPG 84 + + G G V V + G+V +R GD V+ Sbjct: 13 EAIQGGLLPGRVTELRRERFRVMTERGEV-TAVLRGAFYHSAETRVDFPCVGDFVLLHYN 71 Query: 85 KPAAEGVNVKGIVEAVHERTSVLTRPDFYD---------GVKPIAANIDQIVIVSAILPE 135 + +++ V R S +R D+ + +A N D + I+S++ + Sbjct: 72 ESGDS------LIDRVLPRRSKFSRADYSGHAAGYAKTVREQVVATNFDYVFILSSLNWD 125 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 195 ++ I RYL +P+I+L K DL D + I V + SHT Sbjct: 126 FNVTRIMRYLTQARQSGGQPVIILTKADLAPDYNLLLAEVTQSI---PDVPVHAICSHTG 182 Query: 196 DGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAAR 254 G+ L+ L + +F G SGVGKSSLLNAL+ + I + G+HTTT + Sbjct: 183 LGMNELDPYLMPGKTVVFLGMSGVGKSSLLNALIEQDV-MKVQAIREVDSRGRHTTTHRQ 241 Query: 255 LYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIRE 314 L+ P G VID+PG+RE G++ + E I F + + C++ DC+H +PGCA+ Sbjct: 242 LFMLPSGTMVIDTPGMRELGIFDAD-EGIRASFTDVEAWFPQCRFTDCRHQAEPGCAVLA 300 Query: 315 AVEEGKIAETRFENYHRILESMAQVKTRKNF 345 A+ +G + R+E+Y V+ + ++ Sbjct: 301 ALADGSLPRERWEHYVAQKHENKYVQDKTSY 331 >UniRef50_Q67PQ4 Putative GTPase n=1 Tax=Symbiobacterium thermophilum RepID=Q67PQ4_SYMTH Length = 292 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 101/309 (32%), Positives = 142/309 (45%), Gaps = 22/309 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVK 94 G VI V DG C R R + GD V + + Sbjct: 1 MPVGQVIRSHSNIYYVLV-DGREVECRPRGKFRLDRLQVRAGDEVEVTLAP------DGE 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G +E V R + L RP AN+DQ ++V + PE +DR LV E + Sbjct: 54 GRIEKVLPRRNCLERP--------PVANVDQCLVVFTLVEPEADYLFLDRVLVHVEQAGV 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 EP+I+LNKIDL+++ +A +GYRVL +S+ GL L L G+ S+ A Sbjct: 106 EPLILLNKIDLVEEADVAAFVRL--YGDLVGYRVLPISAAEGRGLDELRRHLAGKTSVLA 163 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKS L+ AL + ++ D+S S G+HTT L GG + D+PG Sbjct: 164 GHSGVGKSRLVRALEPQRADVRIGDLSAKSRKGRHTTRHVELIPLTGGGLLADAPGFTYL 223 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 ++ + F EF Y C+Y DC H +P CA+R+AVE G I E+R NY L Sbjct: 224 EFQDIDKWTLRDCFREFARYQAECRYADCLHRKEPDCAVRDAVEAGAIPESRHRNYLMFL 283 Query: 334 ESMAQVKTR 342 + + +K Sbjct: 284 DEVEAMKRW 292 >UniRef50_D2QSL3 Ribosome small subunit-dependent GTPase A n=2 Tax=Flexibacteraceae RepID=D2QSL3_9SPHI Length = 308 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 102/307 (33%), Positives = 165/307 (53%), Gaps = 16/307 (5%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRT--------IRSLVTGDRVVWRPGKPAAEG 90 G+VI G ++ + DG + + ++ + GDRVV+ + Sbjct: 1 MQNGLVIRSTGSWYEIRNPDGHIFQGRLKGKFKLKGLKVTNPIAVGDRVVFD----VEDE 56 Query: 91 VNVKGIVEAVHERTSVLTRPDFYDGVK--PIAANIDQ-IVIVSAILPELSLNIIDRYLVA 147 I+ + R + + R + +AANIDQ +++ + +P S IDR+LV+ Sbjct: 57 AENTAIITDISPRDNYIIRQSVHKTAHGHILAANIDQAVLLATLAMPRTSAGFIDRFLVS 116 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 E+ +I IV NKID+L++EG+AF E +D+Y IGY L S+ G++ E L Sbjct: 117 AESFRIPTTIVFNKIDILNEEGLAFQQEIIDLYERIGYNCLSTSATEGVGVEAFRELLDQ 176 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 ++++ AG SGVGKSSL+NA+ + TN++S + G HTTT A ++ +ID+ Sbjct: 177 KVTLVAGHSGVGKSSLVNAIAPG-LNLRTNEVSSFANKGVHTTTFAEMFELSPNTFIIDT 235 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG++E GL +I F E D L C++ +C H +PGCAI+EAV E +IAE+R+ Sbjct: 236 PGIKELGLMDTSKTEIGHYFPEMRDRLNQCRFNNCLHINEPGCAIKEAVAEEEIAESRYM 295 Query: 328 NYHRILE 334 +Y ++E Sbjct: 296 SYLSMIE 302 >UniRef50_Q08XU7 Ribosome small subunit-dependent GTPase A n=2 Tax=Cystobacterineae RepID=Q08XU7_STIAU Length = 361 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 85/324 (26%), Positives = 147/324 (45%), Gaps = 22/324 (6%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAE 89 G V+ + V++A+ + + GD V + Sbjct: 26 PLVPGRVVRQARGLLSVQTAE-RLFLARTSGRLLHQAAGIEALPTVGDWVALTLPQG--- 81 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 + +++AV R VL R + + IAAN+D + +V+ + + I+R L Sbjct: 82 --EGEALLQAVLPRRGVLVRREAGSEHEGQLIAANLDVVFLVAGLDGNFNPRRIERGLAV 139 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 P+++L+K DL +D + G V +S+H GL + L Sbjct: 140 AWKSGATPVVLLSKADLHEDVPARLAEVRAL---APGVSVFALSTHLGTGLDEVRACLPP 196 Query: 208 -RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 + + G SGVGKS+L+N LL ++ + T + + G+HTTT L+ P GG +ID Sbjct: 197 GKTGLLLGSSGVGKSTLVNRLLEEER-LATQSVRVDDNKGRHTTTHRELFMLPQGGLLID 255 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 PGVRE GLW E E + Q FV+ C++ +C H +PGCA+R VE G++++ R Sbjct: 256 GPGVRELGLWG-EEEGVEQAFVDVLTLAAGCRFSNCGHQREPGCAVRAEVEAGRLSQERL 314 Query: 327 ENYHRILESMAQVKTRKNFSDTDD 350 +++ ++ A + + N + + Sbjct: 315 DHFEKLQREQAHKERQTNGAAQRE 338 >UniRef50_Q39XI8 GTPase EngC n=2 Tax=Geobacter RepID=Q39XI8_GEOMG Length = 358 Score = 283 bits (723), Expect = 8e-75, Method: Composition-based stats. Identities = 91/303 (30%), Positives = 146/303 (48%), Gaps = 20/303 (6%) Query: 42 GIVISRFGMHADVESADGDV---HRCNIRR----TIRSLVTGDRVVWRPGKPAAEGVNVK 94 V + + +A G+ +R+ + + GD VV P +E Sbjct: 28 ARVTAELRGEYRLRAAAGEFPAQLAPRLRKGAADRLDRPMVGDWVVIEPVNGGSEVT--- 84 Query: 95 GIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 + + R ++L R V+PIAAN+D + IV + + ++RYLVA Sbjct: 85 --IHDILPRRTLLARRGAGGGGEVQPIAANVDLVFIVMGLDGNYNPRRLERYLVAARESG 142 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR-ISI 211 EP+++L+K DL D G RV+ VSS +G+ + E L + Sbjct: 143 AEPVVILSKADLCPDAAERVAEAAAL---GPGVRVVPVSSLAGEGVSAVREVLASGVTAC 199 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 F G SGVGKS+L+N L G + + T + + G+HTTT ++ P G VID+PG+R Sbjct: 200 FVGSSGVGKSTLVNRLAGEEV-MATGAVRERDAKGRHTTTHRQMILLPCGAIVIDTPGMR 258 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 EFGLW E + F E + C++ DC H +PGCA+R+A+ G+I + R+ +Y + Sbjct: 259 EFGLWQAG-EGLDASFPEIAELAKQCRFHDCSHAHEPGCAVRDALAGGEIDQGRYASYLK 317 Query: 332 ILE 334 + + Sbjct: 318 LRK 320 >UniRef50_Q7UUZ6 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Rhodopirellula baltica RepID=RSGA_RHOBA Length = 313 Score = 283 bits (723), Expect = 8e-75, Method: Composition-based stats. Identities = 97/309 (31%), Positives = 166/309 (53%), Gaps = 16/309 (5%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPG--KPA 87 +G V+S G+ + V +G ++ C +R+ ++S +V GDRV +R Sbjct: 7 NLLQGRVLSVHGLQSKVLGDNGVLYACAVRQVLKSLSTSQRNVIVAGDRVWFRSESRDGV 66 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLV 146 + G++E V RT +++R + +NID ++I+++ P + +IDR ++ Sbjct: 67 SLKSEADGMIERVEPRTGMISRTSRGRQ-HVLVSNIDAMLIIASAEQPGIKPALIDRMIL 125 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 QIEPI+++NK+DL+D + + + +Y ++GYRVL S+ T + L L Sbjct: 126 TAHQCQIEPIVIINKVDLID---LVDLQPLIGVYSSLGYRVLPTSAETGQNVAYLRALLK 182 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 R + AGQSGVGKSSLLNA+ + +S ++ G+HTTTA++L GG V D Sbjct: 183 DRQTALAGQSGVGKSSLLNAVQPG-LGLAIGAVSSDNDKGKHTTTASQLIPLADGGAVFD 241 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG+R+F LW + ++ + Y+ C+Y DC H + CA++ AV + +I R+ Sbjct: 242 TPGIRQFQLWDISAGEVAGLMPDLRPYVSGCRYPDCLHLAEDDCAVKTAVADARIDARRY 301 Query: 327 ENYHRILES 335 + Y +LE Sbjct: 302 DAYCHLLEE 310 >UniRef50_Q02DD4 Ribosome small subunit-dependent GTPase A n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02DD4_SOLUE Length = 353 Score = 283 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 88/327 (26%), Positives = 144/327 (44%), Gaps = 23/327 (7%) Query: 29 PDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVV 80 P+ + V+ + S G++ + V GD V Sbjct: 10 PELRAAVPSPRLLARVLLSQRDQYKLLSEAGEL-DAEPAGVLWHTAPSRADMPVVGDWVA 68 Query: 81 WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSL 138 R P + IVE V R + +R +PIAANID + +V + + +L Sbjct: 69 ARVVGPG------QAIVEGVLPRRTFFSRRAPGRREDRQPIAANIDLVFLVCGLDGDFNL 122 Query: 139 NIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGL 198 ++RYL PI+VLNK DL DD F + ++ + + + G+ Sbjct: 123 RRLERYLTLAAESGASPIVVLNKSDLCDDLPARFAETV---QVSGAAPIVTIHTRDEAGI 179 Query: 199 KPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 PL L R G SGVGKSS++N L G + T ++ ++ G+HTTT L Sbjct: 180 APLRAWLAPGRTVALLGSSGVGKSSIVNCLAG-DARLRTAEVRESDSRGRHTTTHRELIV 238 Query: 258 FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVE 317 P G +ID+PG+RE LW E + + Q F E C++ DC H + GCA+++A+ Sbjct: 239 LPGSGLLIDTPGMRELQLWAGE-DALDQVFDEIAALAAGCRFGDCSHVAEVGCAVQQALA 297 Query: 318 EGKIAETRFENYHRILESMAQVKTRKN 344 G +A R+ +Y ++ + + ++ + Sbjct: 298 GGTLAPERWHSYLKLRAEVRRHESMAD 324 >UniRef50_B8CWT4 Ribosome small subunit-dependent GTPase A n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWT4_HALOH Length = 282 Score = 283 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 89/302 (29%), Positives = 152/302 (50%), Gaps = 24/302 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRT-IRSLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 +G+V G V ++ R IR R + GD V ++E Sbjct: 2 KGLVTKAVGGFFFVADEQQNIIRTRIRGKVKRKVYPGDFVKV-----------NDAMIEK 50 Query: 100 VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIV 158 ++ RT++L RP AN+DQ++++ +I P + ++D++L+ E + ++P+I+ Sbjct: 51 LYPRTNLLFRPA--------VANVDQVLVIHSIQNPPFARKMLDKFLIMVEAIGVKPVII 102 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 +NKIDL + + ++M Y+ GY+V ++S + GL L L ++S+ AG SGV Sbjct: 103 INKIDLKVPDI--ELEKEMKDYKEEGYQVYLISVKEKMGLNELYLTLEEKLSVLAGPSGV 160 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKSSL+ AL+ + + ++S G HTT L GG + D+PG L + Sbjct: 161 GKSSLIKALVP-EARVKIGEVSQKLKRGVHTTRHVELLPINKGGWIADTPGFSALDLRGI 219 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 E + F Y G CK+R C H +PGC +++AV+EG I+E R+ +Y I + + Sbjct: 220 LSENLRFYFPGLARYEGQCKFRGCTHTHEPGCQVKKAVKEGMISEKRYNSYLNIYRDLEE 279 Query: 339 VK 340 + Sbjct: 280 RE 281 >UniRef50_Q0F2Y7 GTP-binding protein, putative n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2Y7_9PROT Length = 366 Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 80/319 (25%), Positives = 141/319 (44%), Gaps = 21/319 (6%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNV 93 V++ V + ++ + R GD V Sbjct: 27 ARVVAIDRGRYLVHDGNNEL-SAELLGKFFYAAESAARFPCVGDWVCLEHHDS-----EQ 80 Query: 94 KGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 + V R ++L R + + + +A+NID IV + + ++ ++R+LV Sbjct: 81 FASIHTVLPRKTLLKRKTVGYDEEFQMLASNIDVAFIVMSCHYDFHVSKLERFLVMIHEA 140 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRIS 210 IEP+++ K DL+ E + + + + I ++L +S+ T +G++ + + + Sbjct: 141 HIEPVLLFTKSDLITPEALQLLIDDIRA-AGIDIKILALSNITGEGVEQVRRLIEPRKTY 199 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGKSSL+N L+G T +S SG G+HTT L HGG +ID PG+ Sbjct: 200 CMLGSSGVGKSSLMNRLIGSDI-FETQTVST-SGQGRHTTVRRHLILLDHGGMLIDMPGM 257 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE + + E I F + + C++ DC H+ +P CAI+ A+ +GK+ + NY Sbjct: 258 RELAVAEVS-EGIEGSFADILELAATCRFSDCSHNNEPDCAIQAALADGKLNADHYRNYL 316 Query: 331 RILESMAQVKTRKNFSDTD 349 +I + K + F Sbjct: 317 KIQKESRHHKKQTAFVAKR 335 >UniRef50_D1T763 Ribosome small subunit-dependent GTPase A n=2 Tax=Burkholderia RepID=D1T763_9BURK Length = 329 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 115/336 (34%), Positives = 172/336 (51%), Gaps = 26/336 (7%) Query: 22 LKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDV-HRCNIRRTIRSLVTGDRVV 80 K + G G+V++ G H V DG +C R + GDRV+ Sbjct: 4 RAPKKAARGAGSGMHGTRTGGLVVAAHGRHYLVAPEDGGAPLQCFPRGKRSEVAVGDRVI 63 Query: 81 WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNI 140 + P +G++ + ER ++L R D Y K AAN+DQ++IV A P S ++ Sbjct: 64 YEPTSA------DQGVIVEIGERRNLLYRSDQYKS-KLFAANLDQLLIVLATEPHFSEDL 116 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHT--QDGL 198 + R LVA E +++P+IVLNKID+ + ++++ YR +GY VL VS + Sbjct: 117 LGRALVAAEANELKPLIVLNKIDVT--AALDGARKRLEPYRALGYPVLEVSIRMQPEAAR 174 Query: 199 KPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 L E L G ++ GQSG+GKS+L+N L+ E+ T +IS G+HTTT RLY Sbjct: 175 ATLTEHLHGHATLLLGQSGMGKSTLVNLLIP-DAEVATREISTALNSGRHTTTFTRLYPL 233 Query: 259 PHG-------------GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHD 305 PH G +IDSPG +EFGL HL ++ + F EF L C++ +C H Sbjct: 234 PHSSDTAGVNAVNGAAGALIDSPGFQEFGLHHLTEGRLERAFPEFRPLLPNCRFYNCHHL 293 Query: 306 TDPGCAIREAVEEGKIAETRFENYHRILESMAQVKT 341 +PGCAI EAV +G+I R Y +++ +Q+ Sbjct: 294 HEPGCAILEAVADGRIRRERHALYAQLVHEASQIVR 329 >UniRef50_A8MGJ8 GTPase EngC n=6 Tax=Bacteria RepID=A8MGJ8_ALKOO Length = 360 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 24/331 (7%) Query: 25 SKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTG 76 S++ L V ++ V +G++ + + + G Sbjct: 12 SEKHIQESKILDENLMIARVSVQYRDLYKVIMENGEIF-AQVSGKMSYFSKDSIQYPAVG 70 Query: 77 DRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP--DFYDGVKPIAANIDQIVIVSAILP 134 D V+ N I+ + R S R + IA N+D + I ++ Sbjct: 71 DWVLVDRDTDI----NGHAIIHHILTRKSCFERKIAGLKSDSQIIATNVDTVFICMSLNN 126 Query: 135 ELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHT 194 + ++ ++RY+ P++VL K DL +D + +G VL+ SS Sbjct: 127 DFNIRRLERYIAVAWESMATPVVVLTKSDLCEDIQQKLLEI---GTVAMGVDVLVTSSIL 183 Query: 195 QDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAA 253 ++G +++ + R F G SGVGKS+L+N L+G + + TN I D G+HTTT Sbjct: 184 EEGYSSIQKYIENGRTVAFIGSSGVGKSTLINKLIGEEV-LKTNGIRD-DHKGKHTTTHR 241 Query: 254 RLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIR 313 +L+ P+ G +ID+PG+RE G+ + + + F + CK+ DCKH+ +P CA+R Sbjct: 242 QLFVVPNLGVIIDTPGMRELGIVSAD---LERSFDDIEKIAKDCKFTDCKHEGEPHCAVR 298 Query: 314 EAVEEGKIAETRFENYHRILESMAQVKTRKN 344 EA+E+G + R ++Y ++ + + R N Sbjct: 299 EAIEKGDLDIERLKSYKKLQRELKYNELRAN 329 >UniRef50_Q7MGA2 Putative ribosome biogenesis GTPase rsgA 2 n=38 Tax=Proteobacteria RepID=RSGA2_VIBVY Length = 353 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 19/310 (6%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE 102 +++ + S G H I + GD V+ + + + + E Sbjct: 38 RIVAHHRSGYQLCSEQGRFHLA-IHHAQPKMTVGDWVLL----------DEQQQFKRLLE 86 Query: 103 RTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN 160 R S L+R + IA N+D + IV ++ + +L+ I+RYL + IEP++VL Sbjct: 87 RQSELSRKAAGSKIAEQLIATNVDTLFIVCSLNDDFNLSRIERYLSIAKEAHIEPVVVLT 146 Query: 161 KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RISIFAGQSGVG 219 K DL Q V V++ + L+ T R F G SGVG Sbjct: 147 KADLSPQAEQNITQVQQLSATLW---VEAVNALDPASVSALQPWCTKGRTVAFIGSSGVG 203 Query: 220 KSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLE 279 KS+L N LLG + + T I ++ G+HTTTA ++ P G +ID+PG+RE L Sbjct: 204 KSTLTNTLLGEETQ-QTGGIREDDSKGRHTTTARSVHMIPDGALIIDTPGMRELQLADCS 262 Query: 280 PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 E +++ F E C+++DC+H +PGCA+++A+ G + R +NY ++ A Sbjct: 263 -EGVSETFAEIETLAQHCRFKDCQHQQEPGCAVQQAINNGTLEARRLQNYFKLQREQAYN 321 Query: 340 KTRKNFSDTD 349 + Sbjct: 322 ASTFAEQRNR 331 >UniRef50_Q2S3I5 Ribosome small subunit-dependent GTPase A n=2 Tax=Rhodothermaceae RepID=Q2S3I5_SALRD Length = 324 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 106/324 (32%), Positives = 161/324 (49%), Gaps = 19/324 (5%) Query: 29 PDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVV 80 P D G EG+V S G DV+ D + +R R + GDRV Sbjct: 4 PPPTDTSDGPLLEGVVTSSTGSWYDVQVGDRTIPS-RMRGKFRLTRQDVTNPIAVGDRVT 62 Query: 81 WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY---DGVKPIAANIDQIVIVSAIL-PEL 136 R + G + +HERT+ L+R + AN+D+I V A+ P L Sbjct: 63 LRVADE-----DQTGFITDIHERTNKLSRRAAGPREGQEHVLVANVDRIWSVQAVRRPAL 117 Query: 137 SLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQD 196 + +DR LV + +++NKIDL+ + + V + Y ++GY VL S+ + Sbjct: 118 NPRFLDRLLVGAAAQDVPAGLIINKIDLMTQDDLPDVMDLHLRYADLGYPVLATSATEEL 177 Query: 197 GLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 GL L +A G+++ G SG GKS+LLNAL E+ T +S + G HTTT A L+ Sbjct: 178 GLDRLRDAFDGQVNAITGPSGAGKSTLLNALEP-DLELRTGSVSSTTEKGTHTTTHAELH 236 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAV 316 V+D+PGVREFG+ + P+ + F + Y+ C++ DC HD +P CA++ AV Sbjct: 237 ALSDDSYVVDTPGVREFGVRDVHPKDLAHYFPDLSPYVNACQFPDCTHDHEPNCAVKAAV 296 Query: 317 EEGKIAETRFENYHRILESMAQVK 340 E G + R E+Y ILES+ + + Sbjct: 297 ERGDVHAERHESYLAILESLREEQ 320 >UniRef50_C4FT82 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT82_9FIRM Length = 330 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 92/321 (28%), Positives = 153/321 (47%), Gaps = 23/321 (7%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV-K 94 EGI+ V S G + R R + GD V + + + Sbjct: 22 KEGIISQSLSGFYSVRSE-GQTYVTKPRGNFRHQQLKPLVGDHVTFEWEEGLDPKADQAL 80 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G + V R + RP N+D ++V ++ P+ S +++D++L + + I Sbjct: 81 GRLIEVLPRRNQFVRPS--------VVNVDDALVVMSLVEPDFSYSLVDQFLASVTSHGI 132 Query: 154 EPIIVLNKIDLL-----DDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGR 208 EP +VL K DLL + + V + +Y GY V ++ + D L L + L Sbjct: 133 EPHLVLTKYDLLLAQEGEKQAQDRVAQIQALYEAAGYTVTVMDPAS-DALANLSQLLHQG 191 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 + + GQSGVGKS+LLN LL Q +I T +IS G G+HTT LY + + D+P Sbjct: 192 LYVVMGQSGVGKSTLLNQLLP-QADIETGEISHYLGRGRHTTREVNLYPL-NQALIADTP 249 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G +E EQ+TQ F E + C++R C H +PGCA+++A+E G +A +R+++ Sbjct: 250 GFSALDFEQIEKEQVTQLFPEIQELSQECRFRSCLHLEEPGCAVKQALEAGSLAASRYQS 309 Query: 329 YHRILESMAQVKTRKNFSDTD 349 Y ++++ + Q K + + Sbjct: 310 YCQLVQKIDQRKPQYHLKKRR 330 >UniRef50_Q0AXM1 GTPase EngC n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXM1_SYNWW Length = 294 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 20/309 (6%) Query: 35 LFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLV-TGDRVVWRPGKPAAEGVNV 93 + EG+V+ R+ V+ ++ C +R I++ V TGDRV + P + Sbjct: 1 MTANKAEGLVLKRYSGFYYVQDEQYQIYECKLRGKIKAPVFTGDRVKFTPLEAG------ 54 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 KGI+E++ R + L RP AN++ ++I+ A P SL ++D+ L+ + Sbjct: 55 KGILESIIPRKNELYRPR--------IANVNLLLIIMACKQPSPSLILLDKLLLLASYYR 106 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 I P I+LNK DL D F+ D Y +G + S+ + G+ L + +I++F Sbjct: 107 ITPQILLNKSDLPPDSKSIFIE---DYYPQMGLPPIKTSAIKKTGIDTLRIVIENKITVF 163 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SG GKSSLLNAL+ + T ++S G+HTT LY GG + D+PG + Sbjct: 164 AGPSGAGKSSLLNALVDG-ISVKTQELSKKVERGKHTTRHVELYPLESGGWIADTPGFSQ 222 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + ++ ++ F + CK+ DC H + CA+++AV EG IA++R++NY I Sbjct: 223 LEIPAIKSSELASYFNDLSSVAEECKFNDCLHQGEKECAVKDAVNEGLIAKSRYQNYISI 282 Query: 333 LESMAQVKT 341 LE + + Sbjct: 283 LEEILAKER 291 >UniRef50_A8RUS7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RUS7_9CLOT Length = 359 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 31/337 (9%) Query: 15 NANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS-- 72 N Q + + E+ + L+ + VI+++ V + + I R Sbjct: 4 NELKQLQKYGATERFYTESKLYPDYQLARVIAQYRGKYKVITDQQEFF-AEISGKFRYTT 62 Query: 73 ------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANID 124 GD V+ K + V R S+ R + + +AANID Sbjct: 63 EELVQFPTVGDFVMVTVEKEF-------ASIHQVLTRKSLFLRKAVGVSNQSQTVAANID 115 Query: 125 QIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 + + ++ +LN ++RYL P+IVL K DL +D ++E++ +I Sbjct: 116 TVFLCMSLNKNFNLNRMERYLSIAWDSGATPVIVLTKSDLCED-----LSERISQIESIS 170 Query: 185 Y--RVLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISD 241 +++ S D + F G SGVGKS+L+N LLG+ I T +I Sbjct: 171 CFSDIIVTSMFEDDISAKFLSYFSKNQTCAFIGSSGVGKSTLINRLLGVN-TIATQEI-A 228 Query: 242 NSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRD 301 G+HTTT ++ P GG VID+PG+RE + +++ F E CK+R+ Sbjct: 229 KGDKGRHTTTGREMFLCPLGGVVIDTPGMREM---GADSTDLSKTFSELESLAYQCKFRN 285 Query: 302 CKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 C H +PGCA+ A+E G++ R ENY ++ + Sbjct: 286 CTHTNEPGCAVLAAIERGELDIRRLENYRKLQHESSY 322 >UniRef50_D2UC76 Probable gtpase engc protein n=1 Tax=Xanthomonas albilineans RepID=D2UC76_XANAL Length = 370 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 83/327 (25%), Positives = 131/327 (40%), Gaps = 28/327 (8%) Query: 23 KTSKEKPDYDDNLFGEPD--EGIVISRFGMHADVESADGDVHRCNI-----RRTI---RS 72 E+P + P V+ + V A + R Sbjct: 19 PGLPEEPVWQARFDAYPQARPARVVEQHRTGYVVADAVETAFKVESLPDWQRPRFPSHER 78 Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVS 130 GD V+ + A+ R + + R + + IAANID + IV Sbjct: 79 AAVGDWVLLDGT-----------RIVALLPRRTAIKRGAAGEHYHQQVIAANIDTVFIVC 127 Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMV 190 + + + I+RYL+ P++VL K DL E +D +L V Sbjct: 128 GLDADFNPRRIERYLLLVGGGGAAPVVVLTKADLT--EYADDALAVLDELAAQSIPLLTV 185 Query: 191 SSHTQDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 ++ D + L L + + G SG GKS+L N LLG+ K + T + + G+HT Sbjct: 186 NATQADSVAVLRPWLQPGQTVVLVGSSGAGKSTLTNTLLGVHK-MRTAAVRERDSRGRHT 244 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG 309 TT L P G +ID+PG+RE E + F + C++ DC H +PG Sbjct: 245 TTHRALLPLPSGACLIDTPGMRELKPTG-EEDLAEGAFADIEALAAQCRFNDCAHQAEPG 303 Query: 310 CAIREAVEEGKIAETRFENYHRILESM 336 CA++ A+E G+I R NY ++ E + Sbjct: 304 CAVQAAIERGEIDAARLANYLKLREEV 330 >UniRef50_C8WGD6 GTPase EngC n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGD6_EGGLE Length = 356 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 22/334 (6%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRV 79 + + + +P G ++S+ V G++ +R GD V Sbjct: 17 RQAREASGIHDPVVGRILSQAHELYRVVGEQGELF-AEASGKLRHTACSAADFPAAGDFV 75 Query: 80 VWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELS 137 + A + ++ V RTS R + +AANID + +++ + + Sbjct: 76 LLDRATDTA----GRAVIAQVLPRTSAFVRKAAGAALEQQVVAANIDVAFLCMSLVGDFN 131 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 L ++RYL P++VL K D D Q + G VL VSS + G Sbjct: 132 LRRLERYLTLAWESGAVPVVVLTKADACDSLERRLAAVQSVAF---GVDVLAVSSMGECG 188 Query: 198 LKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 + + L R + G SGVGKS+L+N LLG + + T D+ G G+H TT +L Sbjct: 189 CEAVRPYLRPGRTAALLGSSGVGKSTLVNRLLGEEV-LETRDVRA-DGRGRHATTRRQLV 246 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAV 316 P GG V+D+PG+RE GL QGF + C++ +C H ++PGCA+ EA+ Sbjct: 247 LLPGGGLVMDTPGMRELGLGEA-AGGFEQGFADVERLFASCRFSNCTHTSEPGCAVYEAI 305 Query: 317 EEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 + +++E R++ Y ++ A + R + + Sbjct: 306 ADRELSERRWQAYRKLRAEAAFAEDRAGYLARKE 339 >UniRef50_B6YS07 Putative ribosome biogenesis GTPase rsgA n=16 Tax=Bacteroidetes RepID=RSGA_AZOPC Length = 311 Score = 279 bits (714), Expect = 9e-74, Method: Composition-based stats. Identities = 89/317 (28%), Positives = 163/317 (51%), Gaps = 19/317 (5%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVN 92 +G+VI G +++ G++ + ++ R + GD V+ Sbjct: 2 KGLVIKNTGSWYQLKTDRGELIKAKLKGNFRLKGIQSTNPISIGDYVLIEKDLYGT---- 57 Query: 93 VKGIVEAVHERTSVLTRPDF--YDGVKPIAANIDQIV-IVSAILPELSLNIIDRYLVACE 149 + + +R + + R IA N+DQ IV+ P + IDR+LV E Sbjct: 58 --AFISTIEDRKNYIIRRASNLSKQSHIIATNLDQAFLIVTVNYPITTTIFIDRFLVTTE 115 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 +I ++ NK DL ++ M + + + +Y++IGY +++ + L +E+ L G+I Sbjct: 116 AYRIPTLLFFNKTDLYNNHDMNYADILIHLYKSIGYSCYKIAATKDEDLLFMEKLLRGKI 175 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG-GDVIDSP 268 ++F G SGVGKS+++N L+ K+ IS + G HTTT +++ P G +ID+P Sbjct: 176 TLFYGHSGVGKSTIVNRLIPNAKQ-KVQSISKHHNKGMHTTTFSKMLELPSSSGYIIDTP 234 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G++ FG++ +E E+I+ F + + CK+ +C H +P CA+REA++ I+++R+ + Sbjct: 235 GIKGFGIFDIEKEEISHYFPDIFRFSPYCKFYNCTHQKEPACAVREAIKNHYISKSRYIS 294 Query: 329 YHRILESMAQVKTRKNF 345 Y ILE + K R+ F Sbjct: 295 YINILEDVDMNKYREAF 311 >UniRef50_A4ASQ1 Ribosome-associated GTPase n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ASQ1_9FLAO Length = 354 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 90/330 (27%), Positives = 157/330 (47%), Gaps = 22/330 (6%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRP 83 + N G + G VIS V++ + + +R GD V Sbjct: 17 EANNLGSFEIGRVISEHKDRYTVKTGKNE-FDAELLGNLRYTATDRSDLPAVGDWVAI-- 73 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNII 141 +E K ++ A+ R S++ R + IAANID +IV ++ + ++N I Sbjct: 74 ----SEYDEDKALIHALLPRKSIIERKAVGKLGQTQIIAANIDFGLIVQSVNRDFNINRI 129 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 +RYL C +IEP+IVL+K+DL++++ + + Q++ R + +S+ TQ G+ L Sbjct: 130 ERYLTICNASKIEPLIVLSKVDLIEEQKLKELLIQINE-RIEDVPLFAISNQTQIGITEL 188 Query: 202 EEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 + L R G SGVGKS+L+N L G + T +IS++ G+H T+ L + Sbjct: 189 KSELKTGRTYCLLGSSGVGKSTLINTLTGKDL-METGEISESIDRGKHVTSHRELIVLEN 247 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 G +ID+PG+RE G+ + + F + CK+ DC H + GCA+ +A+E G Sbjct: 248 GI-LIDNPGIREVGITN-SSSGLEITFESILNLAQNCKFSDCTHINEKGCAVIDAIENGD 305 Query: 321 IAETRFENYHRILESMAQVKTRKNFSDTDD 350 + + NY ++ + + ++ D Sbjct: 306 LDADAYANYIKMEKEKSHFESDAQERKKKD 335 >UniRef50_Q038H7 Predicted GTPase n=8 Tax=Lactobacillus RepID=Q038H7_LACC3 Length = 301 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 94/318 (29%), Positives = 155/318 (48%), Gaps = 24/318 (7%) Query: 37 GEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVN 92 E G +I + + D+ +G +R R ++R+ + GD ++PG+ + Sbjct: 2 SEDLTGRIIKQISGYYDIAV-NGTTYRTRGRGSLRNDKITPLVGDIAAFQPGEG-----D 55 Query: 93 VKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETL 151 +G + V R + L RP AN+DQ ++I SA+ P+ S N++DR+LV E Sbjct: 56 DEGYLLKVLPRHNALVRP--------PVANVDQAVLITSAVEPDFSKNLLDRFLVYLEGH 107 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS-SHTQDGLKPLEEALTGRIS 210 I I L K DL + + + + + Y IGY V L ++ + +++ Sbjct: 108 DIHAEIYLTKTDLTKPQRLTKIRQDLAGYTKIGYPVFAPDKPFDPTILAQVQASFADKLT 167 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 IF GQ+G GKS+LLN L+ ++ T IS G+HTT LY HGG V D+PG Sbjct: 168 IFTGQTGAGKSTLLNHLVPG-LDLATAAISHALNRGRHTTRTTDLYPI-HGGLVADTPGF 225 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 GL + + + F EF CK+R C+H ++P CA++ A+ G I ++R++NY Sbjct: 226 SSLGLLDVTLDDLRDRFPEFAALAPNCKFRGCQHVSEPHCAVKAALAAGDIMQSRYDNYL 285 Query: 331 RILESMAQVKTRKNFSDT 348 + E ++ R + Sbjct: 286 QFREELS--GKRPVYKKK 301 >UniRef50_C1ZE03 Ribosome small subunit-dependent GTPase A n=2 Tax=Planctomyces RepID=C1ZE03_PLALI Length = 375 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 110/339 (32%), Positives = 170/339 (50%), Gaps = 27/339 (7%) Query: 11 QRRVNANHQRRLKTSKEKPDYDDNLFGEPDE------GIVISRFGM-HADVESADGDVHR 63 RV ++ K + D N + G V+S G V+ DG Sbjct: 43 SERVRGRNEMSRKRTISGATLDGNRIVLEIDPEKALYGRVLSSVGSTQCTVQVEDGRRFM 102 Query: 64 CNIRRTIRSL--------VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG 115 C++RR +R++ V GD+V G++E V R VL+R + Sbjct: 103 CSVRRIVRTVARETRNAVVAGDKVWITASD------ETTGVIERVEPREGVLSR-GHQNR 155 Query: 116 VKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 + AN+ Q++IV SA P L +IDR+LV+ + PI+ +NKIDL+D + + Sbjct: 156 EHILVANVSQMLIVGSAAQPNLKPALIDRFLVSAGKGGVHPIVCVNKIDLVDPVELVSL- 214 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 + Y IG V+M S T G+ L + L ++FAGQSGVGKSSLLNA+ + Sbjct: 215 --LGWYSQIGCDVVMTSVTTGYGVDRLRQLLKNEQTVFAGQSGVGKSSLLNAVQPG-LSL 271 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T +S+ + G+HTT +L GG V+D+PG+R+ LW + PE+I FVEF ++ Sbjct: 272 QTGQVSEVTQKGKHTTRYTQLLPLIEGGWVVDTPGIRQMELWDVRPEEIEGYFVEFRPFV 331 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 LC++ C+H + CA+ AV+ I R+E+Y R++ Sbjct: 332 ALCRFPSCRHYREEDCAVIRAVQMDLIPRVRYESYLRMM 370 >UniRef50_C9LLK1 Ribosome small subunit-dependent GTPase A n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK1_9FIRM Length = 288 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 92/305 (30%), Positives = 161/305 (52%), Gaps = 23/305 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS---LVTGDRVVWRPGKPAAEGVNVKGIV 97 EG V+ + + + + RC R ++ ++ GD V + K +G++ Sbjct: 2 EGTVLKDQNGYFTILGNNQVLTRCRSRGALKKKTDVLVGDHVEYEANKGF------EGVI 55 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQIEPI 156 V++R + L RP +N+D++V+VS+ P+L+ ++D+ ++ E + P+ Sbjct: 56 TKVYKRKNQLYRP--------PVSNVDELVLVSSICTPDLNRGLLDKMILLAENANMPPV 107 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I +NK DL + Y GY + S++TQDGL L++ L GRI +F+G S Sbjct: 108 ICINKCDL----DEVSAKRVCEEYEKAGYPCVYTSTYTQDGLDDLKKLLRGRIIVFSGPS 163 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKSS+LN LG + +S +G G+ TT A L F G ++D+PG + Sbjct: 164 GVGKSSILNYFLGRSY-FTSGAVSAYTGKGRATTRHAELVPFKTGVFLMDTPGYTLLDID 222 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 L+ +++ F +F YLG C + +C+H ++P CAIR+A+E+G + + R+E+Y +I + + Sbjct: 223 LLDIDELGFLFKDFRPYLGKCYFNNCRHISEPKCAIRKAIEDGVVQKRRYESYLQIFQKL 282 Query: 337 AQVKT 341 K Sbjct: 283 KYSKK 287 >UniRef50_B8FMP2 GTPase EngC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMP2_DESAA Length = 360 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 83/330 (25%), Positives = 135/330 (40%), Gaps = 35/330 (10%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAE 89 +I V D ++ + GD V+ R Sbjct: 23 NLTPARIIGVRKNAFIVHDGDREIL-ATAAGRLYHDDSPDSLFPAAGDWVLIRDT----- 76 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGV---------KPIAANIDQIVIVSAILPELSLNI 140 I+ V R + L+R + IAAN+D + IV + + ++ Sbjct: 77 ------IIAHVLPRRNALSRGASGARHGRAESAVRGQVIAANLDTVFIVCGLDRDYNVRR 130 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKP 200 I+RYL P+++LNK DL + + G V VS+ + G++ Sbjct: 131 IERYLTLIYNCGCSPVVILNKADLHPAPLDCAAEVESVAF---GVPVFAVSAKSGQGVEV 187 Query: 201 LEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L + L + + G SG GKS+L+N L G + ++S+ G G HTTT + P Sbjct: 188 LRQFLPPGQTAALLGSSGAGKSTLVNQLSGAEVRAA-KEVSEAVGKGVHTTTTRDIIPIP 246 Query: 260 HGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEG 319 G ++D+PG+RE LW + I F + C Y DC H+ +PGC +REAVE G Sbjct: 247 GAGMILDNPGIREIALWD-DAGGIDDAFPDIQALAKECHYTDCTHEHEPGCRVREAVEIG 305 Query: 320 KIAETRFENYHRILESMAQVKTRKNFSDTD 349 + R +NY ++ + + + R+ S Sbjct: 306 VLKPARLQNYLKMQKELEFLNQRQEKSANR 335 >UniRef50_B3QS55 Ribosome small subunit-dependent GTPase A n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS55_CHLT3 Length = 334 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 113/326 (34%), Positives = 174/326 (53%), Gaps = 24/326 (7%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS-------LVTGDRVVWRPG 84 + + + GI+ GMH V+++DG+ + C R+ S V GD V + Sbjct: 9 ANRVKSDELSGIIFEGKGMHYLVQASDGEFYNCRTLRSTVSENPDATLAVVGDSVTLKST 68 Query: 85 KPAAEGVNVKGIVEAVHERTSVLTRPD------FYDGVKPIAANIDQIVIVSAI-LPELS 137 E +G++ V ER L R + +A+NI+QIVIVS++ +P + Sbjct: 69 LAPDEENYGEGVITKVFERRMKLARKRNRKTNRSGEAEHVMASNIEQIVIVSSVAMPPIR 128 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 L +IDRYL E+ + +IV+NK+DL E + ++IYR +GY+ L+VSS T G Sbjct: 129 LGLIDRYLAFAESEGLNALIVVNKMDL---EHSEELAGDVEIYRLLGYKSLLVSSVTGMG 185 Query: 198 LKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 + L L +IS+F G SGVGKS+L+NAL G + D+S S G HTT+ A + Sbjct: 186 MDELRRELGQKISVFTGHSGVGKSALINALTGED--LRIGDVSQKSLKGAHTTSNAVMLS 243 Query: 258 FPHG-----GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAI 312 P G VID+PG+REF L ++P + F+EF ++ C + C H +P CA+ Sbjct: 244 IPGKTRDDVGYVIDTPGIREFALAGIDPLDLRHFFIEFQNFAPDCGFSSCTHTLEPNCAV 303 Query: 313 REAVEEGKIAETRFENYHRILESMAQ 338 R+A + GKI TR+E+Y I ++ + Sbjct: 304 RDAYQNGKIFPTRYESYLTIYATLEE 329 >UniRef50_C5CSN3 Putative ribosome biogenesis GTPase rsgA n=29 Tax=Burkholderiales RepID=RSGA_VARPS Length = 318 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 19/310 (6%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 +G+VI+ G H VE+ G+ C+ R V GDRV W+ + +G +E Sbjct: 19 LHDGLVIASHGRHCLVETPTGERLICHPRGKKSQAVVGDRVRWQASED-------EGTIE 71 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIV 158 V R ++ R D K AAN+D ++I+ A PE S + + R L+A E +I PII Sbjct: 72 EVVPRRNLFYRQDEI-RTKSFAANLDHVLILIAAEPEFSEHQLARALIAAEAERITPIIA 130 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS--SHTQDGLKPLEEALTGRISIFAGQS 216 LNK DL + A+ ++ YR + + VL +S + + L + L G+ ++ G S Sbjct: 131 LNKSDLAEPFERAW--NKLAPYRRMHHGVLPLSLKASGEADYASLMKLLAGKSTLVLGPS 188 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG--GDVIDSPGVREFG 274 G GKS+L+N L+ + T +IS G+HTTT+ Y +IDSPG +EFG Sbjct: 189 GAGKSTLINLLVPGATAL-TGEISQALNSGKHTTTSTTWYWVDEARTTSLIDSPGFQEFG 247 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE----GKIAETRFENYH 330 L H+ P Q+ + ++ CK+ +C H +PGC + V+ G I+ TR+ Y Sbjct: 248 LNHIAPMQLAGLMPDIAEHANDCKFYNCTHLHEPGCGVIANVDAPGKPGPISATRYRIYG 307 Query: 331 RILESMAQVK 340 + ++Q + Sbjct: 308 ELFAELSQSR 317 >UniRef50_B8I262 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Clostridium RepID=RSGA_CLOCE Length = 305 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 158/319 (49%), Gaps = 26/319 (8%) Query: 39 PDEGIVISRFGMHADVESADGD-VHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 GI++ G V+ + + C R R + GDRV + +G Sbjct: 1 MQLGIILKGIGGFYYVKQEKTEDIFECKPRGVFRKNSVTPLPGDRVGF----SIIDGDKK 56 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQI-VIVSAILPELSLNIIDRYLVACETLQ 152 G ++ + R+S L RP AN+DQI +IV+A P ++D+ L+ ET Sbjct: 57 LGNIDEILPRSSELVRPA--------VANVDQIAIIVAAKAPNPDYMLLDKLLITAETRN 108 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 I +I +NKIDL DD + Y GY V+ +SS G K L+E L G I++F Sbjct: 109 IRVLICVNKIDLDDDT----AKIVRNAYSPAGYDVIEISSVRNIGYKRLKEELKGHITVF 164 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AGQSGVGKS++LN ++ + T +S+ G+HTT A L +GG V D+PG Sbjct: 165 AGQSGVGKSTILNHIM-ESWVMETGSVSNKIERGKHTTRHAELLELKYGGYVADTPGFSS 223 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 F + + Q+ + + EF Y+ C++ C H T+PGC + EA+E +I R++ Y ++ Sbjct: 224 FEIIDIPYNQLERYYPEFLPYINTCRFNSCSHITEPGCRVIEALERSEIDNNRYQRYIQL 283 Query: 333 ---LESMAQVKTRKNFSDT 348 L+ + Q K +K S Sbjct: 284 YKALKDIPQYKGKKTESRR 302 >UniRef50_Q8EZ61 Putative ribosome biogenesis GTPase rsgA n=3 Tax=Leptospira RepID=RSGA_LEPIN Length = 359 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 88/332 (26%), Positives = 162/332 (48%), Gaps = 24/332 (7%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGD---VHRCNIRRTIRSLVTGDRVVWRPGKPAA 88 + L G V++ +G ++ + G+ + + + S+VTGD V+ R Sbjct: 21 EPKLLEGLKPGRVLAVYGEYSKIIIEQGEKKGIFSGALMASGESIVTGDWVLIR-----E 75 Query: 89 EGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 + IVE + R + L R P G + IA+NID ++++ + + S I+RYL Sbjct: 76 IEGDELCIVEKILPRKTFLRRSNPGKRKGSQAIASNIDLLLVIMGLDNDYSPRRIERYLF 135 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 + + IVLNK DL D F+ + + M+S+ + + + + Sbjct: 136 LAKVSGAQVTIVLNKKDLCMDPENKFMEIKTIAGET---PIEMISALDLKQTRTILQWID 192 Query: 207 G-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 + F G SG GKS+++N+LLG + + TN++ + G G+HTTT L+ P GG ++ Sbjct: 193 PGKTITFLGSSGAGKSTIINSLLGGEIQ-KTNEVKVSDGTGKHTTTRRELFLLPSGGVLM 251 Query: 266 DSPGVREFGLW-HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 D+PG+RE GL+ +++ + F E C++ DC H+ +P C + AV++G+I+E Sbjct: 252 DNPGIREVGLFSEGSEDELEEVFPEIAVAAEECRFNDCSHNEEPNCGVVAAVKDGRISEA 311 Query: 325 RFENYHRILESM--------AQVKTRKNFSDT 348 R+ +Y ++ + + + +K D Sbjct: 312 RYFSYLKLSKELMAYQALNDPEEARKKKQKDK 343 >UniRef50_Q729X9 GTP-binding protein, putative n=4 Tax=Desulfovibrio RepID=Q729X9_DESVH Length = 348 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 22/320 (6%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAEGVNV 93 +++ G++ + GD V + Sbjct: 26 ARIVAVDRGRCMATGNAGEI-AAEVSGRFIHEHDDPADYPCVGDWVALDIHGGLSA---- 80 Query: 94 KGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 G++ V R + L R + IAAN+D IV + + N ++RYL Sbjct: 81 -GVIHHVLPRRTWLRRRTAGQTGRHQMIAANVDVAFIVQSCHYDFCPNRLERYLFMVREG 139 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-GRIS 210 ++P++VL K D++ E + + + + V+ S+++ DG+ ++ A+ G+ Sbjct: 140 GVKPVVVLTKTDMVSAEALEGLVAVVHSVAD--VDVIATSAYSGDGVDAVKAAVEAGKTC 197 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 G SGVGK++L N LLG + T +S +G G+H TT ++ GG ++D+PG+ Sbjct: 198 CLLGSSGVGKTTLTNLLLGREL-FATQHVSA-TGEGRHQTTRRQMVILSGGGLLVDTPGM 255 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 REFG+ E E+ G G C++ DC+H+ +PGCA+R A+E G +++ R++NY Sbjct: 256 REFGVIGPESEEGFVG-EAVERLAGSCRFHDCRHEREPGCAVRAALEAGTLSQERYDNYI 314 Query: 331 RILESMAQVKTRKNFSDTDD 350 R+ + A + D Sbjct: 315 RLRKEAAFGALSLHERRHRD 334 >UniRef50_A3ZVZ2 Putative uncharacterized protein n=2 Tax=Planctomycetaceae RepID=A3ZVZ2_9PLAN Length = 257 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 94/261 (36%), Positives = 152/261 (58%), Gaps = 12/261 (4%) Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SA 131 + GDRV +RP N +GI+E++ R +L R I AN+DQ++IV SA Sbjct: 2 VAAGDRVWFRPAD------NHEGIIESIEPRYGILCR-ASKRRQHVIVANVDQLLIVASA 54 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS 191 P L N+IDRYLV E I P+I +NK+DL+D + + +Y +GY+V+++S Sbjct: 55 AEPYLKPNLIDRYLVTAEKAGITPVICINKVDLIDPADL---QPLVGVYGQMGYQVILLS 111 Query: 192 SHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTT 251 + G++ L A+ R S+ +GQSGVGKS++LNA+ + +S+ + G+HTTT Sbjct: 112 ATEGIGVERLRAAVRDRASVLSGQSGVGKSTILNAIEPG-LNLRVGHVSETTDKGRHTTT 170 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 + L GG V+D+PG+R+F LW + PE++ F + ++ C++ DC H + GC Sbjct: 171 TSSLVPLAAGGHVVDTPGIRQFQLWDVIPEEVAGYFRDLRPFITGCRFPDCSHTHEEGCG 230 Query: 312 IREAVEEGKIAETRFENYHRI 332 ++ AV +G + R+E+Y +I Sbjct: 231 VKGAVADGFLDVRRYESYCQI 251 >UniRef50_C0A6W9 Ribosome small subunit-dependent GTPase A n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6W9_9BACT Length = 378 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 97/327 (29%), Positives = 143/327 (43%), Gaps = 22/327 (6%) Query: 39 PDEGIVISRFGMHAD-VESADGDVH-RCNIR------RTIRSLVTGDRVVWRPGKPAAEG 90 + V+ H V++AD ++ C R + GD V Sbjct: 27 LEPARVVVELRRHYYAVQTADAELLGECTGRFHHQANTAVDYPAVGDWVAVLRQPDG--- 83 Query: 91 VNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVAC 148 + + A+ R S +R D + IAANID + +VS + + I R+LVA Sbjct: 84 --RRAHIHALLPRRSAFSRRAAGDEEVEQLIAANIDTVFLVSGLDRNHNPARIQRFLVAA 141 Query: 149 ETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG- 207 EP++VLNK DLL D A + G VL+ S T+ GL+ L+ Sbjct: 142 RESGAEPVVVLNKSDLLSDPRAADAVRREIEQLVPGVTVLVTSIETRKGLRILQRYAKPG 201 Query: 208 RISIFAGQSGVGKSSLLNALL-----GLQKEILTNDISDNSGLGQHTTTAARLYHFPHGG 262 R F G SGVGKSSL+NAL + T ++ + G+HTTT L G Sbjct: 202 RTLAFVGSSGVGKSSLINALACDDGNDDDSALPTAEVREKDSKGRHTTTRRELVVSRSGA 261 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIA 322 VID+PG+RE LW + + + + F + CK+ C H +PGCA+R AVE G +A Sbjct: 262 LVIDTPGMRELQLWDAD-DGVEEAFADIAALAVRCKFGRCHHRNEPGCAVRAAVESGALA 320 Query: 323 ETRFENYHRILESMAQVKTRKNFSDTD 349 R E+Y ++ + R+ Sbjct: 321 AERLESYRKLKAEQVAARARQKIKTAK 347 >UniRef50_Q6MJR6 Putative GTPase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJR6_BDEBA Length = 373 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 85/324 (26%), Positives = 143/324 (44%), Gaps = 25/324 (7%) Query: 42 GIVISRFGMHADVES---ADGDVHRCNIRRTIRS---------LVTGDRVVWRPGKPAAE 89 G +I++ V + R GD V+ Sbjct: 36 GRIINQEREMYRVVFFKNDHEGKALAQLSGKFRYEHSDLNLEYPGVGDWVICELHSN--- 92 Query: 90 GVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 + ++ V R S R P + +AAN+D I + + + +L +DRY+ Sbjct: 93 --DEHAVIHEVLSRQSCFYRKEPGSGARAQIVAANVDVIFVAVSANQDFNLKRLDRYMSL 150 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLE-EALT 206 P+IVL K DL +D + E D R+ V VS+ + L+PL+ L Sbjct: 151 AWESNASPVIVLTKADLAED-LKGLIAEVED--RHPAVPVHAVSALDPESLEPLKTHLLP 207 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 G+ + G SGVGKS+L N LL + +I T I ++ G+HTTT+ LY P G ++D Sbjct: 208 GKTVVLLGSSGVGKSTLGNLLLEKE-QIKTQGIREDDDKGKHTTTSRSLYQLPSGALLMD 266 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG+RE GL E F + + C+++DC+H T+PGCA++ A+ ++ R+ Sbjct: 267 TPGMRELGLLDH-REGFENLFDDILELATHCRFKDCQHQTEPGCAVQAALASEELEVGRW 325 Query: 327 ENYHRILESMAQVKTRKNFSDTDD 350 E++ + + + + N + Sbjct: 326 ESFQNLERELRYFERKTNPEIARE 349 >UniRef50_B1C5S8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S8_9FIRM Length = 292 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 84/310 (27%), Positives = 150/310 (48%), Gaps = 25/310 (8%) Query: 39 PDEGIVISRFGMHADVES-ADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 +G ++ G V S D + R R GD V++ Sbjct: 1 MLKGKILKGVGSFYTVYSYEDKKEYTLKARGIFRKQKITPTVGDEVLF------TAVNTD 54 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 +G +E + ER S+L RP +N+D I+IV A+ P++S ++D+ ++ Sbjct: 55 EGSIEEIIERKSLLIRPS--------ISNVDNIIIVCAVKEPDISFFLLDKMIINAGIKN 106 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 + I NK DL DD ++ E Y+N G+ ++ S+ T +G+ ++ L + S+F Sbjct: 107 ADLTICFNKCDLADDTFKDYLKE---EYKNSGFNLIFTSNVTGEGIDEVKSLLKDKSSVF 163 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 G SG GKSSL+N+L + T+ +S G+HTT + L+ + D+PG Sbjct: 164 MGVSGAGKSSLINSLFEG-YNLETSHVSRKIKRGRHTTRHSELFMEDENTFIADTPGFSS 222 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 ++ +E E + + EF Y+ CK+ +C H +P C +++AV+EG I++ R++ Y +I Sbjct: 223 LEVFDVEKEDLYHYYNEFIPYIN-CKFPNCVHINEPVCGVKDAVKEGNISKLRYDTYKQI 281 Query: 333 LESMAQVKTR 342 E + + + Sbjct: 282 YEEIKSKENK 291 >UniRef50_A8LW34 Ribosome small subunit-dependent GTPase A n=3 Tax=Micromonosporaceae RepID=A8LW34_SALAI Length = 362 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 102/341 (29%), Positives = 143/341 (41%), Gaps = 30/341 (8%) Query: 17 NHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR----- 71 R + + D+ G V V A G V + Sbjct: 13 WDADRADDVRRRTDH--------QPGRVARVDRGVCTVLGAAGPVRASLGGAVLAAAAQD 64 Query: 72 ---SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQI 126 GD V+ A + VEAV R + L R + +AAN+ Sbjct: 65 LTYLPCVGDWVLL------ATWPDRNVTVEAVLPRRTALIRRTAGKAASGQVLAANLTAA 118 Query: 127 VIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR 186 +V + PE L I+R L P++VL K DL+ D A + + G Sbjct: 119 AVVEPVHPEPDLGRIERLLALAHESGARPLVVLTKTDLVSDP-AALTRQVAAV--APGVP 175 Query: 187 VLMVSSHTQDGLKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGL 245 VL VS+ DGL PL + R G SG GKSSL+NAL G + T I G Sbjct: 176 VLPVSAERGDGLDPLRPEVAPSRTLGLLGPSGAGKSSLVNALAGA-VVMPTQAIRRVDGK 234 Query: 246 GQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHD 305 G+HTTT L P GG V+D+PGVR GL + + F + C+YRDC HD Sbjct: 235 GRHTTTWRALVAVPGGGAVVDTPGVRAVGLLD-GAVGLDRAFADIATLATGCRYRDCAHD 293 Query: 306 TDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 +P CA+REAVE G+++ R+E++ R+ +A R++ Sbjct: 294 GEPACAVREAVESGELSGRRWESWRRLQREVAFETRRRDAR 334 >UniRef50_B2GD51 Putative ribosome biogenesis GTPase rsgA n=57 Tax=Lactobacillales RepID=RSGA_LACF3 Length = 296 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 94/315 (29%), Positives = 148/315 (46%), Gaps = 25/315 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 G + D+ S G ++R R R V GD+V + + Sbjct: 1 MKNGTIQQSLSGFYDIWSG-GKLYRTRARGNFRKRGLKPVVGDQVEFEAENQ------RE 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G + + R + L RP + AN+D V+V+A+ P LS N++DR LVA E+ I Sbjct: 54 GYLLKILPRKNQLVRP--------MVANVDLAVVVTAVKEPNLSTNLLDRQLVALESQGI 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS-HTQDGLKPLEEALTGRISIF 212 +P+I +K DLL D+ + + Y+ IGY VL ++ L L + LTG++ Sbjct: 106 DPVIYFSKTDLLSDQEADALMLVVKGYQMIGYPVLYQRPPFGEEALGELRKILTGKVVTM 165 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 GQ+G GKS+LLN L + T +IS G+HTT L + D+PG Sbjct: 166 MGQTGAGKSTLLNHLAP-DLNLATGEISQALKRGRHTTRKVSLMQV-GDALIADTPGFSS 223 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + + + E++ F E CK+R C H +P CA++ A++ GKI +R++NY + Sbjct: 224 YEDFQMTVEELPHFFPEMQALAPECKFRGCLHIKEPSCAVKNALKHGKIMNSRYDNYLQF 283 Query: 333 LESMAQVKTRKNFSD 347 E +A K N+ Sbjct: 284 HELIANQKP--NYQK 296 >UniRef50_C6BVN5 Ribosome small subunit-dependent GTPase A n=2 Tax=Desulfovibrio RepID=C6BVN5_DESAD Length = 370 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 91/335 (27%), Positives = 153/335 (45%), Gaps = 37/335 (11%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----------LVTGDRVV 80 + + + G V+S V S D + + +R V GD V+ Sbjct: 26 FQEKVSGADIPARVVSVNKDIFLV-SQGVDDAQVRLSGKVRHKSGTDSENLFPVIGDWVL 84 Query: 81 WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG---------VKPIAANIDQIVIVSA 131 R +++ V R + L+R + +AAN+D + IV Sbjct: 85 LR-----------DAVIDKVLPRRNALSRGAAGGRGKSHGAAMKEQVMAANLDTVFIVCG 133 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS 191 + + ++ I+RYL + P++VL K DL +D + V+E + G V +VS Sbjct: 134 LDRDYNVRRIERYLTLVYNCNLSPVVVLTKADLHEDP-LECVDEVESV--AFGVPVHLVS 190 Query: 192 SHTQDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTT 250 + + G+ LE+ L+ + + G SG GKS+LLN L G + T +S + G G+HTT Sbjct: 191 ADDESGVLELEQYLSSGKTATMIGSSGAGKSTLLNRLYGNSVQ-QTGAVSQSVGKGRHTT 249 Query: 251 TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGC 310 T + P GG +ID+PG+RE + E + F + DY C++ DC H DPGC Sbjct: 250 TGRDMIAMPQGGSLIDNPGIREIAFY-SEDGGVESSFADIEDYARYCRFSDCDHLNDPGC 308 Query: 311 AIREAVEEGKIAETRFENYHRILESMAQVKTRKNF 345 + +AVE G ++ R E+Y ++ + + R++ Sbjct: 309 NVLQAVENGDLSTERLESYRKMKRELDYISQRQHK 343 >UniRef50_C5NY56 Ribosome small subunit-dependent GTPase A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY56_9BACL Length = 293 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 93/315 (29%), Positives = 150/315 (47%), Gaps = 28/315 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 EG ++ V+ G++ C R R+ + GD V + N Sbjct: 2 TKEGKILKALSGFYYVDC-SGELITCRARGNFRNENITPLVGDDVKIQLSD------NNT 54 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQI 153 G V + ER + L RP ANID I++VS PE S ++++ + E + Sbjct: 55 GYVVEILERKNELLRPK--------VANIDYSIIVVSVKDPEFSSKLLNKMICLNENSNV 106 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 + IIV K+DLL DE + + E M+ Y IGY+V S + ++ L++ ++ + + Sbjct: 107 DIIIVFTKLDLLSDEELNKMKEIMNYYYEIGYQVFTNS---DEDIEKLKQVISEKYVAIS 163 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQSG GKS+ +N L +I T +IS + G G+HTT Y + D+PG Sbjct: 164 GQSGAGKSTFINKLA-EHLDIETGEISKHLGRGRHTTRHTEFYQIDD-FYIADTPGFSSL 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + +E E + F EF+DY CK++ C H + C ++EAVE +I E+R+E+Y + Sbjct: 222 DITFIEKEDLQYLFREFNDY--DCKFKPCNHMEEIQCGVKEAVESKEILESRYEDYKVLF 279 Query: 334 ESMAQVKTRKNFSDT 348 Q + RK + Sbjct: 280 TE-KQNQKRKYIKER 293 >UniRef50_D0L125 Ribosome small subunit-dependent GTPase A n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L125_HALNC Length = 321 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 110/327 (33%), Positives = 176/327 (53%), Gaps = 16/327 (4%) Query: 13 RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS 72 R+ + ++ + PD + VI+ G +E+A+G + R N RRT+ Sbjct: 4 RLTDRQKNQIANRQSAPD------ESLERATVITHHGTELIIENAEGKLLRANARRTLGV 57 Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI 132 L TGDRV WR G+ A E I+E V+ R++ L RPD + + +AANIDQ++I+ A Sbjct: 58 LTTGDRVGWRTGEDARE------IIEFVYPRSNTLIRPDTHGKTRLMAANIDQVLIILAP 111 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLD---DEGMAFVNEQMDIYRNIGYRVLM 189 P ++ N+++R LVA L PIIVLNK+DLL E A + + + ++ ++ Sbjct: 112 TPWMNPNVVERTLVAALDLPATPIIVLNKVDLLTTTQPEHRALIEQTLALWAAQDIDIVR 171 Query: 190 VSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 +S+ T +G+ L L +IS+ G SGVGK+SL ++ N++S +S GQHT Sbjct: 172 ISTRTGEGIDALRNVLNDKISMMIGLSGVGKTSLARSITAQAATAAINELSAHSQEGQHT 231 Query: 250 TTAARLYHFPH-GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP 308 T + L+ H G +ID+PGVR+F + + + I + F + G C++ +C H +P Sbjct: 232 TRHSTLFRLDHMPGGLIDAPGVRDFAVAAQDAQAIDRAFPDILRLAGGCRFYNCTHSQEP 291 Query: 309 GCAIREAVEEGKIAETRFENYHRILES 335 CA+R AV ++ RFENY + Sbjct: 292 NCAVRAAVANSQLDSRRFENYQSLKRE 318 >UniRef50_Q5HPX0 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Staphylococcus epidermidis RepID=RSGA_STAEQ Length = 291 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 87/309 (28%), Positives = 150/309 (48%), Gaps = 24/309 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 G ++ V +G+ R R V GD V + + Sbjct: 1 MKTGRIVKLISGVYQV-DVEGERFDTKPRGLFRKKKFSPVVGDIVDFEVQNT------KE 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQI 153 G + VH+R + L RP +NID++VIV A+ PE S ++DRYLV + + Sbjct: 54 GYIHHVHDRNNELKRP--------PVSNIDELVIVMSAVEPEFSTQLLDRYLVIAHSYHL 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +P I++ K D+ ++ + + + + +Y+ IGY + + + + + + Sbjct: 106 KPRILITKHDIASEQEILKIKDTIKLYQKIGYATQFI--GKDSNYTATVDEWSDGLIVLS 163 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQSGVGKS+ LN+ Q ++ TNDIS + G+HTT LY GG + D+PG Sbjct: 164 GQSGVGKSTFLNSYQP-QLKLETNDISKSLNRGKHTTRHVELYD-RKGGYIADTPGFSAL 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 H+E EQ+ F++ H+ CK+R+C H +P C ++ VE+G+I + R+++Y ++ Sbjct: 222 DFNHIEKEQLKDFFIDIHEAGEQCKFRNCNHIKEPQCHVKTLVEKGEIPQFRYDHYQQLY 281 Query: 334 ESMAQVKTR 342 ++ K R Sbjct: 282 NEISNRKVR 290 >UniRef50_C8WW82 Ribosome small subunit-dependent GTPase A n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW82_ALIAD Length = 292 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 89/307 (28%), Positives = 142/307 (46%), Gaps = 25/307 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVK 94 EG V+ DV DG V RC R + +++ GD V + P + Sbjct: 1 MREGRVVRAISGFFDVFD-DGQVRRCRARGVFKVKGTTVLVGDFVRYEPVGA------QE 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQI 153 GI+ V R + L RP AN+D +V+ + + P+LS ++D+ L+ + Sbjct: 54 GIIREVLPRRTELIRP--------PIANVDHVVVACSFVTPDLSFYMLDKTLLQASVAGV 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 EP I K DL+ E + +++YR +GY + V++ +G+ L L GR+++ A Sbjct: 106 EPTIAFTKADLVSPE---LASATVELYRRLGYEAVAVAAKQGEGVSVLRARLQGRVTVLA 162 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SG GKS+L NAL T ++S+ G G+ TT L + D+PG + Sbjct: 163 GPSGAGKSTLANALAPG-ISFKTGEVSEKIGRGRQTTRHVELVRLDDATWMADAPGFSQL 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 + E F EF C YRDC H + CA++ AVEEG + R+ +Y ++ Sbjct: 222 QVPVASREVRLH-FPEFRPLAQECAYRDCLHLDEDNCAVKRAVEEGHVPAPRYMSYRQLY 280 Query: 334 ESMAQVK 340 E + + Sbjct: 281 EEAREQE 287 >UniRef50_Q73MQ9 GTPase YjeQ n=1 Tax=Treponema denticola RepID=Q73MQ9_TREDE Length = 315 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 97/321 (30%), Positives = 161/321 (50%), Gaps = 27/321 (8%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVN 92 +G+V+ VE DG C+I+ + L GD V P + + Sbjct: 2 KGLVLKGSNNIFYVECEDGKFRSCSIKGKVLKDSALYYNPLAAGDFVNLEPDTHSDD--- 58 Query: 93 VKGIVEAVHERTSVLTRPDFY-DGVKPIAANIDQIV-IVSAILPELSLNIIDRYLVACET 150 +G++ + ER + R + + + +AANID +V +VSA P +DR LV E Sbjct: 59 -EGLITGLIERKNSFLRLNQKLNMPQLLAANIDLLVCVVSAANPPFRPRFVDRVLVQAEI 117 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 +I +IV+NK DL + +A V ++++ ++ + Y+ + VS+ G+ L E+L+ + S Sbjct: 118 QKIPVLIVINKCDL---KILADVRDRIEDWKRLDYKTIEVSAKEGRGMDNLIESLSSKTS 174 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF--------PHGG 262 GQSGVGKS+LLN + + T+ ISD G HTTT + H Sbjct: 175 ALVGQSGVGKSTLLNFIAP-DLNLKTSAISDKYDRGTHTTTQGEYFKIKALTSKGKEHSI 233 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR-DCKHDTDPGCAIREAVEEGKI 321 ++ID+PGVR F ++ +EPE F E +G CK+ C H + GCAI EA+++G I Sbjct: 234 NIIDTPGVRHFAIYGIEPEDTALYFPEMEKLIGSCKFGLSCTHTHELGCAILEALKKGNI 293 Query: 322 AETRFENYHRILESMAQVKTR 342 + R+ ++ I + + + + Sbjct: 294 HKDRYTSFELIHKELQETVKK 314 >UniRef50_B2UNU0 GTPase EngC n=3 Tax=Verrucomicrobiales RepID=B2UNU0_AKKM8 Length = 373 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 78/320 (24%), Positives = 146/320 (45%), Gaps = 19/320 (5%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVN 92 G +I ++ G+ + + GD V PG+ E Sbjct: 28 PGRLIRETKINFTALLDGGEDVDAVVSGKLWHDAATDAELPAVGDWVAIDPGEAGDE--- 84 Query: 93 VKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACET 150 ++ + R + +R + + N+D + +V+ + + ++RY Sbjct: 85 --AVIRTILPRQTCFSRKAPGKSSAEQVLGTNVDIVAVVTEPGTDFNPRRMERYFTLIRR 142 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RI 209 P+I+LNK DL E + + + + ++ +S+ G+ + L+ + Sbjct: 143 SGASPLILLNKTDLFSREEVENAMQILREL-SPECAIISISALHNRGITEFRKCLSKGKT 201 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 G SGVGKS+L+N LLG + + T ++++ +G G+HTT A L HGG +ID+PG Sbjct: 202 ICIVGSSGVGKSTLVNTLLG-DEWLWTGEVNEVTGKGRHTTVARELVLLKHGGLLIDNPG 260 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +RE +W + + + F + + CK+ DC H D GCAIR+AV+EGK+ + R+ N+ Sbjct: 261 IREIQMWT-DEHTLRESFADLTELAHECKFADCSHGKDSGCAIRKAVDEGKLDKERYLNF 319 Query: 330 HRILESMAQVKTRKNFSDTD 349 + +A++ R+ + Sbjct: 320 LNLENEIARLAKRQKKRQMN 339 >UniRef50_B2SLQ8 Putative ribosome biogenesis GTPase rsgA n=19 Tax=Xanthomonadaceae RepID=RSGA_XANOP Length = 363 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 78/333 (23%), Positives = 129/333 (38%), Gaps = 28/333 (8%) Query: 23 KTSKEKPDYDDNLFGEPD--EGIVISRFGMHADVESADGDVHRCNIRRTIRSL------- 73 E+ + P V+ + V + + Sbjct: 19 PGPPEEAAWKAVFAAHPQALPARVVEQHRTGYVVADTPEASLKAESLPEWQRPRFPSHER 78 Query: 74 -VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVS 130 GD V+ + A+ R + + R + IAANID + IV Sbjct: 79 AAVGDWVLMEGK-----------RIVALLPRRTSIKRGAAGAHYHQQVIAANIDTVFIVC 127 Query: 131 AILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMV 190 + + + I+RYL+ +P++VL K D E ++ + + Sbjct: 128 GLDADFNPRRIERYLLLVGGGGAQPVVVLTKAD--QTEHAEDALAVLEELEAQNIPLRAL 185 Query: 191 SSHTQDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHT 249 ++ + L L R ++ G SG GKS+L N LLG +K + TN + +N G+HT Sbjct: 186 NAKDPASVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTEK-MKTNGVRENDSRGRHT 244 Query: 250 TTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG 309 TT L P G +ID+PG+RE E + GF + C++ DC H +PG Sbjct: 245 TTHRALIPLPSGACLIDTPGMRELKPTG-EEDLAEGGFSDVEALAAQCRFNDCAHIAEPG 303 Query: 310 CAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 CA+R A+E + R NY ++ +A + Sbjct: 304 CAVRAAIEADLLDPERVANYMKLRVEVASAAEK 336 >UniRef50_B8DLQ8 GTPase EngC n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLQ8_DESVM Length = 371 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 94/339 (27%), Positives = 144/339 (42%), Gaps = 39/339 (11%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNV 93 V + + G+V + + GD V + A Sbjct: 26 ARVCAVDRGAYRIRGEGGEV-PAELAGRLAYHTDNPADLPCVGDWVTAQWHSDATA---- 80 Query: 94 KGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 GI+ V R +VL R DG V+ IAANID IV + + + ++RYLV Sbjct: 81 -GIIHRVFPRRTVLRRKTAGDGCGVQMIAANIDTAFIVQSCHYDFNPGRLERYLVMLADG 139 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RIS 210 +EP++VL K DL+ + ++ + + RV+ +SS T GL L +AL R Sbjct: 140 GVEPVVVLTKTDLVTPDDLSRLLAVVAAVTPA--RVIALSSVTGAGLDVLRQALAPGRTH 197 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISD-------------------NSGLGQHTTT 251 G SGVGK++LLN L Q D +G G HTTT Sbjct: 198 CLLGSSGVGKTTLLNQLTSGQAGAGVLDGQALATRADQATRADRATRAVSATGEGTHTTT 257 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 +L G V+D+PG+RE G + + GF + G C+Y DC+H+ + GCA Sbjct: 258 RRQLTMLDGGALVVDTPGMREVGTVAA-ADGVDAGFADIALLAGECRYADCRHEHEAGCA 316 Query: 312 IREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 +R AV+ G++A + NY ++ + A + + D Sbjct: 317 VRAAVDSGELAAAHYHNYLKLRKEAAFNEMSQLDRRRKD 355 >UniRef50_A6WF06 GTPase EngC n=8 Tax=Actinomycetales RepID=A6WF06_KINRD Length = 357 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 13/313 (4%) Query: 37 GEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS-LVTGDRVVWRPGKPAAEGVNVKG 95 G+ V+ DVE+ G + TGD V R P Sbjct: 34 GDLLPARVVRVHRGACDVETPLGPQRVGTPAGHLVPEPTTGDWVGLRLDDPDGP------ 87 Query: 96 IVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 V V R +VL R +AAN+D +V+ +L ++R+L Sbjct: 88 RVVGVVARRTVLARASVTGRSTEHQLAANVDTVVVAVGADSRTTLGRVERFLALAWNSGA 147 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +P++ L K DLLD++G+ V ++ +G V+ VS+ G+ L L + Sbjct: 148 QPVVALTKSDLLDEDGLEDVLARVRG-DAVGVAVVPVSATGPRGVGELRNHL-RGTVVLI 205 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SG GKS+L NALLG + + G G+HTT L P G ++D+PG+R Sbjct: 206 GSSGAGKSTLANALLGQDR-FAVGAVRSADGKGRHTTVTRELVPVPGGLVLVDTPGLRSL 264 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 G+ L E + + F + D C++ DC H +PGCA+ A++ G ++ R ++Y R+ Sbjct: 265 GVSELG-EGLERTFADVEDVAVDCRFSDCSHTAEPGCAVLAAIDAGVMSARRLDSYRRLE 323 Query: 334 ESMAQVKTRKNFS 346 A +R + Sbjct: 324 REQAWFASRTDAR 336 >UniRef50_Q1WUA8 GTPase n=2 Tax=Lactobacillus salivarius RepID=Q1WUA8_LACS1 Length = 296 Score = 273 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 90/312 (28%), Positives = 141/312 (45%), Gaps = 27/312 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 +G + + DV D + +R R R V GD V ++ Sbjct: 2 TTKGRIKQSLSGYYDVLVEDKE-YRTRARGNFRKKKMTPVVGDWVDFKIDDNGD------ 54 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G + ++ R + L RP ANID ++VSA P+ S N++DR LV E+ + Sbjct: 55 GYILKIYPRKNQLVRP--------PIANIDTAIVVSACVEPDFSPNLLDRQLVMLESNNV 106 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQD---GLKPLEEALTGRIS 210 P++ +K DLL+ E + Y Y +S ++ L L LT I Sbjct: 107 RPVLFFSKADLLNQEQREKFESYFNYYSK--YYSCYISFENENRQNVLNNLMCDLTNEIV 164 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 + GQ+G GKS+LLN L + T IS G+HTT L +G + D+PG Sbjct: 165 VVMGQTGAGKSTLLNDLKP-DLNLETGKISKALSRGKHTTRKVTLLDI-NGVMIADTPGF 222 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 F L ++ + + + +F Y CK+R C H +P CA+++AV +G+I E R+ NY Sbjct: 223 SSFELLNITKDTLPLMYPDFVKYQDNCKFRGCLHLKEPKCAVKDAVNKGEILENRYINYV 282 Query: 331 RILESMAQVKTR 342 + + +A K R Sbjct: 283 QFQDMLANKKVR 294 >UniRef50_Q8A8H7 Putative ribosome biogenesis GTPase rsgA 1 n=9 Tax=Bacteria RepID=RSGA1_BACTN Length = 355 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 93/330 (28%), Positives = 157/330 (47%), Gaps = 24/330 (7%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTI-------RSLVTGDRVVWRPG 84 + + + G +I +V + DG V+ C + + TGD V+++P Sbjct: 22 QISQYKDMSHGRIIVTHKTCYEVVAEDG-VYLCELTGNMIYGRVPDEYPCTGDWVIFQPF 80 Query: 85 KPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIID 142 KGI+ + R L R + IA+ +D+ IV ++ ++ + Sbjct: 81 DA------NKGIIVDILPRERALYRKKNGRVADRQAIASYVDKAFIVQSLDDNFNVRRAE 134 Query: 143 RYLVACETLQIEPIIVLNKIDL-LDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 R++ +I+P++VLNK DL D + + + + + V + S + L Sbjct: 135 RFIAQVMEEKIKPVLVLNKADLGCDRQKIDEAIKHIARQ----FPVFITSIRQPQTILRL 190 Query: 202 EEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 E++T +F G SGVGKSSL+NAL G + T+DIS ++G G+HT+T + Sbjct: 191 RESITKGETVVFVGSSGVGKSSLVNALCGKSV-LNTSDISLSTGKGRHTSTRREMVLMDG 249 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 G +ID+PGVREFGL P+ +T+ F E DY C++ DCKH +PGCA+ EAV G Sbjct: 250 SGVLIDTPGVREFGLAIDNPDSLTEMF-EISDYAESCRFSDCKHIDEPGCAVLEAVHNGT 308 Query: 321 IAETRFENYHRILESMAQVKTRKNFSDTDD 350 + +E+Y ++ ++ + Sbjct: 309 LDHKVYESYLKLRREAWHFSASEHEKRKKE 338 >UniRef50_A6CYS2 Ribosome-associated GTPase n=2 Tax=Vibrionaceae RepID=A6CYS2_9VIBR Length = 344 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 26/325 (8%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRPGKPAAE 89 VI R V++ DG + ++ + GD + R Sbjct: 5 NLQTYRVIERNANRYKVQTPDG-IRTAQLKGSFIHLIQDKQGYPCVGDWIEARDDNNII- 62 Query: 90 GVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAIL--PELSLNIIDRYL 145 ++E++ +R S+++R + + IAAN+D IV + S +++R L Sbjct: 63 ------LIESIKKRKSLVSRKASGEATVQQTIAANVDYTFIVMGLDGGRNYSDRLLERLL 116 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 P+++LNK DL +D + + + +G ++ S+ G+ + L Sbjct: 117 TVAWNSGATPVVILNKSDLNEDAELVQMQAETI---ALGIDIITCSALDGTGINDVMTYL 173 Query: 206 TG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 ++ +F G SGVGKS+L N LL Q + TN + G+HTT+++ L+ +GG + Sbjct: 174 ANGKVGVFIGPSGVGKSTLTNTLLQYQAQ-KTNGLRLQDMRGRHTTSSSYLFELENGGFI 232 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 +D+ G++E W I F E CKYR+C+H+ +PGCA+++ +E G I Sbjct: 233 VDTSGIKEVQAW-ANGNDIDSVFEEISLVAQDCKYRNCQHEGEPGCAVQKELEAGNITPE 291 Query: 325 RFENYHRILESMAQVKTRKNFSDTD 349 R+++Y + + A ++ RK+ +++ Sbjct: 292 RYDSYLNLKQEHAFLERRKSDKNSN 316 >UniRef50_C5BLQ5 Putative GTPase EngC protein 2 n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLQ5_TERTT Length = 392 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 93/332 (28%), Positives = 147/332 (44%), Gaps = 24/332 (7%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR------SLVTGDRVVW 81 D + E G VIS A V D + ++ GD V+ Sbjct: 53 AQQLADPVVLESRLGRVISVQRSVAMVACGD-QRRNVELTLNLQQAEPVDRPTVGDWVIL 111 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLN 139 +E V ER S+ R + +PIAANID + IVS+ E + Sbjct: 112 DETHT---------RIEQVLERKSLFKRIGSGNTTQFQPIAANIDVVFIVSSCNDEFKES 162 Query: 140 IIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLK 199 ++RYL C+ P+I+L K+DLLDD G ++ + G V +V++ L Sbjct: 163 RLERYLALCDEAGAIPVIILTKVDLLDDAG-GYIERARSV--QSGVAVEVVNALDPSTLD 219 Query: 200 PLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 ++ + G SGVGKS+LLNAL + T I ++ G+HTTT LY Sbjct: 220 GVKGWIEGNSTIALVGSSGVGKSTLLNALA-EETLAATGSIREDDKKGRHTTTHRELYFL 278 Query: 259 PHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE 318 GG +ID PG+RE + ++ + + F + + C++ DCKH +PGCA+ A+EE Sbjct: 279 ASGGLIIDVPGMRELRVADVD-DALGHVFEDIEELSEKCRFIDCKHMNEPGCAVLAAIEE 337 Query: 319 GKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 G+++ R +Y +++ + D Sbjct: 338 GRLSGRRLASYQKLVRENEFATSTLAEKRAKD 369 >UniRef50_A0Q5F4 GTPase n=18 Tax=Francisella RepID=A0Q5F4_FRATN Length = 295 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 114/302 (37%), Positives = 168/302 (55%), Gaps = 11/302 (3%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR-SLVTGDRVVWRPGKPAAEGVNVKGIVEA 99 + VI+ FG + V+ + R ++ L GD V N ++ Sbjct: 2 QAKVITNFGGNICVKLTTSEKVSALQRSHLKGELTVGDNVELE-------YTNATYVITK 54 Query: 100 VHERTSVLTRPD-FYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIV 158 + +R ++++RP+ + K IAANID VI+ P + IDRYL A IEPIIV Sbjct: 55 LLDRKNLISRPNQYQRKNKNIAANIDSAVIIITHSPAPVEHYIDRYLAALHNSDIEPIIV 114 Query: 159 LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV 218 +NKID + + +DIY+NIGY++ +S+ G+ L E L + SIF GQSGV Sbjct: 115 INKIDDQSENDRQHLQCIIDIYKNIGYKIFYISAKNNIGIDSLLEELKDKTSIFIGQSGV 174 Query: 219 GKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHL 278 GKS LN +LG +K T ++SD++ G+HTTT + LY ++IDSPG+REFGLWH+ Sbjct: 175 GKSETLNTILG-EKITATTEVSDSTKKGRHTTTCSTLYEINGSTNIIDSPGIREFGLWHI 233 Query: 279 EPEQITQGFVEFHDYLGLCKYRDCKHDT-DPGCAIREAVEEGKIAETRFENYHRILESMA 337 E++ GF++F Y G+C++R+C H+ GC I + V G I RF+NYHRIL + Sbjct: 234 SQEELFDGFLDFKKYKGMCQFRNCSHEEGSKGCEIVKQVSLGNINPVRFKNYHRILAEIK 293 Query: 338 QV 339 Sbjct: 294 NN 295 >UniRef50_C8ZYN3 Ribosome-associated GTPase n=4 Tax=Enterococcus RepID=C8ZYN3_ENTGA Length = 317 Score = 270 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 80/322 (24%), Positives = 151/322 (46%), Gaps = 21/322 (6%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWRPGKPAAEGVN 92 +GIVI + A V + G+ + R + GDRV+ Sbjct: 4 QGIVIFQAKDLAKVVLSSGEERYARVSGKFRQQATALKDYPIVGDRVM------GHCYDQ 57 Query: 93 VKGIVEAVHERTSVLTRPDFYDGVKP--IAANIDQIVIVSAILPELSLNIIDRYLVACET 150 + +++ V R S L R + IAAN+ + + + E +L ++R++ Sbjct: 58 NQFLIDTVLPRKSFLQRKVAGNRPDEPGIAANVTTVFLTTNANEEFNLARLERFVTIVWN 117 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 P+IVL KID +D + Q+ + VL + + + + + Sbjct: 118 SGANPVIVLTKIDQMDTTETEAIINQLKL--TFALPVLATTIYKDERTQFEPFLTPESMV 175 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 F G SGVGKSSLLN LLG +++ T I + G G+HTTT+ +L+ P+G VID+PG+ Sbjct: 176 AFIGSSGVGKSSLLNQLLGDERQT-TKAIREEDGRGRHTTTSRQLFRLPNGAMVIDTPGM 234 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 RE L + + + + C++++C+H+++P CA++EA+ G++++ F Y Sbjct: 235 REISLETVAASSLDRHYQMIELLAEKCRFKNCRHESEPNCAVKEALASGELSQDLFNRYR 294 Query: 331 RILESMAQVKTRKN--FSDTDD 350 ++ + + ++ +++ + Sbjct: 295 KMEKELVYLRHKEHLQARKKRE 316 >UniRef50_Q03RY0 Predicted GTPase n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03RY0_LACBA Length = 354 Score = 270 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 85/326 (26%), Positives = 137/326 (42%), Gaps = 23/326 (7%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWR 82 + + G ++ + V +A G V V GD V + Sbjct: 17 HQFADISDRQVGHIVRQERQQYQVITAVG-VVSAQTSGRFNHHVLDTSDFPVIGDFVGIQ 75 Query: 83 PGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNI 140 I+ R S+ R V+ +AAN+D +I ++ + + + Sbjct: 76 LTPTKDA-----AIIHQELPRNSLFVRQAAGTTHQVQSVAANVDVALICMSLNHDFNPHR 130 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKP 200 ++RYL C P++VL K DL D ++ +GL P Sbjct: 131 LERYLTVCWDSGATPVVVLTKSDLCSDTEAKLAVIAPMTLGVTVLTTTTTTA---NGLAP 187 Query: 201 LEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L+ L G+ G S VGKS L+N LLG K I+T D N G HTTT+ LY Sbjct: 188 LQTFLQAGQTFALLGSSDVGKSILINRLLG--KTIITTDGLRNDDKGHHTTTSRELYQLS 245 Query: 260 HGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEG 319 G +ID+PG+R GLW + + Q F + D + C++R+C H T+PGCA++ A+ G Sbjct: 246 SGALMIDTPGMRALGLWGAD-TGLAQNFSDVADLIRHCRFRNCHHQTEPGCAVKAALATG 304 Query: 320 KIAETRFENYHRILESMAQVKTRKNF 345 ++ R ++Y ++ A + + Sbjct: 305 QLTTERGQSYQKLQAENAYSHDTQAY 330 >UniRef50_D2S5Q8 Ribosome small subunit-dependent GTPase A n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5Q8_9ACTO Length = 340 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 100/321 (31%), Positives = 147/321 (45%), Gaps = 22/321 (6%) Query: 29 PDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--LVTGDRVVWRPGKP 86 PD D + G V V +ADG+V + GD V R Sbjct: 11 PDRDAGIPAGCVPGRVARVDRGRLTVLTADGEVRAHPAAALLEDTGPAVGDWVALRGELA 70 Query: 87 AAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRY 144 AV R + TR + +AAN+D +++V A+ L ++RY Sbjct: 71 -----------VAVLPRRTAFTRVVAGRTSAEQVVAANVDLVLVVDALTTAPRLRRVERY 119 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 L P++VL K DL DD A + Q D +G VL VSS T +GL + Sbjct: 120 LAVAWGSGATPVVVLTKADLCDDVPAALLAMQED---AVGVDVLPVSSVTGEGLDAVRAL 176 Query: 205 LTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 L R + G SGVGKSSL NAL G + T I D G G+HTTTA L+ P GG Sbjct: 177 LGPGRTAAMVGPSGVGKSSLANALAGTEV-AATRGIRDADGRGRHTTTARELHLLPGGGL 235 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 ++D+PG+RE GL ++ + + + C++RDC H T+PGCA+ A++EG++ Sbjct: 236 LVDTPGMRELGL--VDDAGVGTAYADVTGLAAACRFRDCAHRTEPGCAVAAAIDEGRLDP 293 Query: 324 TRFENYHRILESMAQVKTRKN 344 R+ + ++ + R + Sbjct: 294 ARYTAWRKLQAEAHRQALRSD 314 >UniRef50_A9EN60 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EN60_SORC5 Length = 370 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 86/333 (25%), Positives = 146/333 (43%), Gaps = 22/333 (6%) Query: 29 PDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVV 80 L V+ V++ADG + + GD V Sbjct: 31 ASQLACLKDAVQPARVVLASASRHHVQTADGP-RLAVVSGRLAHEAADRAALPTVGDWVG 89 Query: 81 WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSL 138 RPG A + R++ L R + +AANID++ IV+++ + +L Sbjct: 90 LRPGDGA-----GPSYIVHTFARSTCLRRKAAGPTVEAQVLAANIDKVFIVTSLNADFNL 144 Query: 139 NIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGL 198 ++RY+ A P++VLNK D+ D +++ D+ + +VS+ + GL Sbjct: 145 RRLERYIDAVLDSGARPVLVLNKADVCPDPAR-YIDAARDV--APAAPIALVSALSGAGL 201 Query: 199 KPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 L + G G SGVGKS+L N LLG + ++ I + G+HTT L+ Sbjct: 202 DALRAEIGAGETIALVGSSGVGKSALSNRLLGAEVQLE-GAIRASDERGRHTTAHRELFL 260 Query: 258 FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVE 317 P GG +ID+PG+RE G+W GF + + C++RDC HD +PGCA+ A++ Sbjct: 261 IPGGGLLIDTPGIRELGVWSAG-GSAPAGFDDVEAHAAACRFRDCAHDGEPGCAVLRAIK 319 Query: 318 EGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 +G + R Y ++ + +++ + Sbjct: 320 DGDLDPERLGAYLKLGAERRHLAGQQDVRVRIE 352 >UniRef50_C0R0A9 Ribosome-associated GTPase n=2 Tax=Brachyspira RepID=C0R0A9_BRAHW Length = 367 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 86/329 (26%), Positives = 143/329 (43%), Gaps = 22/329 (6%) Query: 32 DDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVWRP 83 + E VI + + S +G+ I+ IR V GD V+ + Sbjct: 26 KEINNEELVPARVIRINKRYYTLFSDEGEFL-ARIKGKIRYNSEIQSELPVVGDWVLMKK 84 Query: 84 GKPAAEGVNVKGIVEAVHERTSVLTRPD--FYDGVKPIAANIDQIVIVSAILPELSLNII 141 + ++ + R ++L R + ++ I +NID I+ I E+ ++ I Sbjct: 85 S-------DNNAFIDTILTRKNILYRKANVKKNDIQAIVSNIDYAFIIVGIDNEMPMSAI 137 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 RYL T I+PII ++KIDL +D + + SS T Sbjct: 138 ARYLSVVHTSGIKPIIAISKIDLYEDAEYKELLAAIKETY-PNETAFAYSSKTGKNADTF 196 Query: 202 EEALTGRIS-IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH 260 + + S +F G SG GKS+++N LL +++ T ++ + G HTTT L Sbjct: 197 LKYIKKDTSSVFIGASGAGKSTIINYLL-KDEKMKTQEVREYDFKGMHTTTHRELLVLDS 255 Query: 261 GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK 320 GG VID+PG+R GLW + I + F + +Y CK++DC H +P C I E +E + Sbjct: 256 GGVVIDTPGLRNLGLWEDDK-GIKKTFEDLEEYAKKCKFKDCTHQHEPDCYILELLENDE 314 Query: 321 IAETRFENYHRILESMAQVKTRKNFSDTD 349 I R++ Y +L +++ D Sbjct: 315 IPYERYDAYVTLLNENRELQKTSIEIKKD 343 >UniRef50_Q6GHL4 Putative ribosome biogenesis GTPase rsgA n=58 Tax=Staphylococcus RepID=RSGA_STAAR Length = 291 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 90/309 (29%), Positives = 146/309 (47%), Gaps = 24/309 (7%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 G ++ V +G+ R R V GD V + + Sbjct: 1 MKTGRIVKSISGVYQV-DVNGERFNTKPRGLFRKKKFSPVVGDIVEFDVQNI------NE 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQI 153 G + V+ER + L RP +NID +VIV A+ P S ++DR+LV + Q+ Sbjct: 54 GYIHQVYERKNELKRP--------PVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHSYQL 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 I++ K D E +NE + IY NIGY + D K + EA + + + + Sbjct: 106 NARILVTKKDKTPIEKQFEINELLKIYENIGYETEFI--GNDDDRKKIVEAWSAGLIVLS 163 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQSGVGKS+ LN + + TNDIS + G+HTT L+ +G + D+PG Sbjct: 164 GQSGVGKSTFLNHYRP-ELNLETNDISKSLNRGKHTTRHVELFERQNG-YIADTPGFSAL 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 H++ ++I F+E + Y CK+R+C H +P C ++ +E G IA+ R+++Y ++ Sbjct: 222 DFDHIDKDEIKDYFLELNRYGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDHYLQLF 281 Query: 334 ESMAQVKTR 342 ++ K R Sbjct: 282 NEISNRKVR 290 >UniRef50_D1VSD9 Ribosome small subunit-dependent GTPase A n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSD9_9FIRM Length = 285 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 86/306 (28%), Positives = 152/306 (49%), Gaps = 28/306 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGI 96 +G ++ G ++S D + R T R S + GD V + N G Sbjct: 2 QGKIVKLLGGFYYIKSGD-KLIETRARGTFRYVKESPIVGDNVEFNYDD------NTLGY 54 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 ++ ++ R ++LTRP AN+D IV+ + P+ +L +ID+ +V E I+ Sbjct: 55 IQKIYPRKNILTRPK--------VANVDLIVLFIPLKNPDYNLTLIDKTIVQIEISNIDI 106 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +I +NK D+ ++ IY + G+ +++S T + L+E L G+ FAG Sbjct: 107 LIAINKADI----DISKAENLQKIYNSCGFNTILISGKTGLNIDTLKEKLRGKTVAFAGV 162 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SG GKS++ + +L K+I + ++S +G G+HTT L++ + D+PG + Sbjct: 163 SGAGKSTISSLIL--DKKIESGEVSQKTGRGKHTTRHTELHY-NSDYFIFDTPGFSSLDI 219 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 L+ + + F EF +YLG CK+ +C H +P C I+ VE G+I +R+ENY + + Sbjct: 220 -KLDKKDLCHYFREFENYLGQCKFLNCNHINEPDCMIKRKVENGEIPISRYENYKYLYQE 278 Query: 336 MAQVKT 341 + + Sbjct: 279 LKNKEE 284 >UniRef50_B9L2Y7 Ribosome small subunit-dependent GTPase A n=2 Tax=Thermomicrobia (class) RepID=B9L2Y7_THERP Length = 329 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 113/317 (35%), Positives = 166/317 (52%), Gaps = 9/317 (2%) Query: 30 DYDDNLFGEPDEG-IVISRFGMHADVESADGDVHRCNIRRTIRSLVTG-DRVVWRPGKPA 87 + + G+ IVI G + DV + +G V RC +R ++ D VV Sbjct: 2 TEEADHPGDAWPANIVIRVRGPYYDVLTPEG-VLRCVVRGALKKERRREDLVVVGDRVVV 60 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFY-DGVKPIAANIDQIVIVSAI-LPELSLNIIDRYL 145 +G++EAV R L R + + I AN+DQ+V+V A PELSL ++DR+L Sbjct: 61 RVVAPGEGVIEAVAPRRRALVRRARDREAAQVIVANLDQLVVVMAAAQPELSLGMLDRFL 120 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 V E+ + +I LNKIDL + YR IGY V+ S + GL L + + Sbjct: 121 VVAESQDLPTVICLNKIDLDP---AGRARAMLAPYRAIGYPVVETSVASGAGLHELWQTI 177 Query: 206 TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVI 265 G++S AG SGVGK+SL+ A E+ +S+ +G G+HTTTA+ L ++ Sbjct: 178 EGKLSALAGPSGVGKTSLVKAFRP-DLELRIGAVSEATGRGRHTTTASELIQLDERTFLV 236 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG+ LW + PE++ + F EF YLG C YRDC+H +PGCA+R AVE G I R Sbjct: 237 DTPGIGVLHLWAILPEELDRCFREFRPYLGACPYRDCRHLDEPGCAVRAAVEAGVIDAGR 296 Query: 326 FENYHRILESMAQVKTR 342 +E Y + + + Q R Sbjct: 297 YERYRALYQDLVQEMER 313 >UniRef50_C5C2S6 GTPase EngC n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2S6_BEUC1 Length = 352 Score = 267 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 91/323 (28%), Positives = 143/323 (44%), Gaps = 18/323 (5%) Query: 27 EKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKP 86 + D D+G + V DG + GD ++ P Sbjct: 20 SRVDRQRVRALPLDDGGAFAPGDGTTVVTDRDGTLPAAV--GEPLVPAVGDVLLAAPTPE 77 Query: 87 AAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRY 144 + V V R S L R D + IAAN+D +VI + P+ ++ ++R Sbjct: 78 LPDRVL-------VAPRRSELARDSADRTSREQVIAANVDVVVIAEHLDPDPAVGRVERL 130 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 L P++VL K DL+DD +V + + +G VL VS+ T G+ L E Sbjct: 131 LTLAWRSGATPLVVLTKADLVDDA-ADWVADVGAV--ALGVDVLAVSATTGLGMSELRER 187 Query: 205 LTGRIS-IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 + + + G SG GKS+L+NAL G + G G+HTT+ L P G Sbjct: 188 IAPGTTLVVVGPSGAGKSTLVNALAGTEVMA--TGDRRGDGKGRHTTSHRELVPLPGGAT 245 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 +ID+PG+R GL P+ + + F + D + C++ DC HDT+PGCA+ AVE+G + E Sbjct: 246 LIDTPGLRAVGLV-ATPDAVAKTFSDVEDLVAQCRFSDCAHDTEPGCAVLAAVEDGTLDE 304 Query: 324 TRFENYHRILESMAQVKTRKNFS 346 R ++ + M + R + Sbjct: 305 RRLASWRSLQREMLRQAARSDAR 327 >UniRef50_A4XL75 Ribosome small subunit-dependent GTPase A n=2 Tax=Clostridia RepID=A4XL75_CALS8 Length = 290 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 26/305 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIV 97 G+++ V +G ++ C R R + GD V E ++ Sbjct: 5 GVIVKAIAGFYYVYDREGTIYECKARGVFRKDDITPLVGDNVTI------VEKAKGAYVI 58 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQ-IVIVSAILPELSLNIIDRYLVACETLQIEPI 156 + + R + L RP AN+D IV+V+++ PE+S +D+ LV +++P+ Sbjct: 59 DKILPRRNQLIRP--------PIANVDTAIVVVASVFPEVSFITLDKLLVNVLREKVKPL 110 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I +NK+DL + + + V Q I+ V+ VS+ T +G++ L+E + G+IS+FAGQS Sbjct: 111 ICVNKVDLDNGKTLEVVKNQYGIFE-----VIGVSAKTGEGMEKLKEHIKGKISVFAGQS 165 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGK+S+LN L+ + +IS G+HTT L + D+PG + Sbjct: 166 GVGKTSILNCLIPG-LNLKVGEISKKIERGRHTTRVVELLRAGEDTYIADTPGFSSIEIT 224 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 + +++ + EF+DY CK+ C H +P C ++ AV + KI R+E Y +I + Sbjct: 225 GMLKDELKYYYPEFYDY-ENCKFPGCNHIFEPECGVKAAVNDRKINFERYERYKQIFMQL 283 Query: 337 AQVKT 341 K Sbjct: 284 PAQKE 288 >UniRef50_D1BG37 Predicted GTPase n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG37_SANKS Length = 344 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 99/331 (29%), Positives = 150/331 (45%), Gaps = 28/331 (8%) Query: 22 LKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVW 81 + + E + G G V+ V + DG V ++ L GD V+ Sbjct: 13 PRRTDEAATHPAAGPG-VRPGRVVRVERDLVRVATEDGLVAVPSV-----GLAVGDWVLT 66 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLN 139 A +V +R + L R D + +AAN+D +V+V + P ++ Sbjct: 67 DGASWA-----------SVLDRRTALRRKDSGQTSDEQLLAANVDVVVVVEPMDPRPNVR 115 Query: 140 IIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLK 199 ++R P++VL K DL +A V + G VL VS+ T DGL Sbjct: 116 RVERMATLAWASGATPLVVLTKSDLALGGEVADVEAVV-----PGVEVLEVSAETGDGLD 170 Query: 200 PLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 + LT R + G SG GKS+L+NAL G + + T D+ G G+HTTT L Sbjct: 171 VVRSHLTASRTFVLLGPSGAGKSTLVNALAGTEV-LATGDVR-GDGRGKHTTTHRELVPV 228 Query: 259 PHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEE 318 P G ++D+PG+R GL + E + Q F E C++ DC+H T+PGCA+ EA+E+ Sbjct: 229 PGLGCLVDTPGIRGVGLV-ADEEGLEQAFPEVVALAAGCRFVDCEHRTEPGCAVLEAIED 287 Query: 319 GKIAETRFENYHRILESMAQVKTRKNFSDTD 349 G + E R +Y +L +A RK D Sbjct: 288 GALPEVRLASYRHLLREIAHQTARKASQDRS 318 >UniRef50_Q14LR6 Conserved hypothetical duf258 gtpase protein n=1 Tax=Spiroplasma citri RepID=Q14LR6_SPICI Length = 289 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 145/305 (47%), Gaps = 26/305 (8%) Query: 40 DEGIVISRFGMHADVE-SADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 G++I V+ D ++ C + R V GD V + + + Sbjct: 3 QTGMIIRIVSEFCYVKNDTDHQIYACKAKGLFRHQEIKPVVGDYVQFEIQN------DKQ 56 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSA-ILPELSLNIIDRYLVACETLQI 153 GI+ + R + L RP AN+DQ+VI++A P + ++++YL E + Sbjct: 57 GIIYQIEPRKNKLYRPR--------IANVDQVVIITAMAEPTFNSYLLNKYLAFIEYKNL 108 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQD--GLKPLEEALTGRISI 211 +P+IV K DLL + + + + Y +GY V +S+ D + E+ +IS+ Sbjct: 109 KPVIVFTKKDLLKTDEL--YQKYFNWYPKLGYEVYFISNKKDDKKIWQQFEQLFQNKISV 166 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 GQ+G GKSS LN LL + I T +IS G G+HTTT + LY +G V D+PG Sbjct: 167 LTGQTGSGKSSTLNTLLQAEI-IKTQEISKALGRGKHTTTTSALYELLNG-MVADTPGFS 224 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 F L E ++ + + F+ Y CK+R C H +P C I+ V+ I + + +Y R Sbjct: 225 TFDLRDYEKGELARSYHFFNQYANECKFRTCLHLHEPHCKIKALVQANIIPQFFYNDYVR 284 Query: 332 ILESM 336 I++ Sbjct: 285 IMQEQ 289 >UniRef50_C7RGU6 Ribosome small subunit-dependent GTPase A n=4 Tax=Anaerococcus RepID=C7RGU6_ANAPD Length = 290 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 87/311 (27%), Positives = 154/311 (49%), Gaps = 28/311 (9%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVK 94 +G +I V+ +G + R R + GD VV + + K Sbjct: 1 MKQGKIIKAQKELYYVDC-NGKILMAKARGNFRVKKIKPLVGDNVVI------DDLEDRK 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 + + R + + RP+ +NIDQI++ + I P L+L +D+YL CE + Sbjct: 54 AYITEILPRKNEIKRPN--------ISNIDQILLFATIKDPILNLYNLDKYLAMCEYKDM 105 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 + +IVL+KIDL D+ V + +IY NIGY+++ + + + + + L + S + Sbjct: 106 DVVIVLSKIDLCDENE---VKDFENIYENIGYKLISLDNFDNFPKEKILDILKNKTSAVS 162 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKS+ LN L+ E+ T IS+ S G++TT ++ + D+PG F Sbjct: 163 GASGVGKSTFLNNLI--DIEVETGSISEKSKRGKNTTRHTEIFKIGDESFLFDTPGFDSF 220 Query: 274 GLWHLEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + +E E ++ F EF D CK++DC H +P C ++ + +G I+++R++NY + Sbjct: 221 DIDFIEDEKELKYLFREFRD--KRCKFKDCNHINEPACGVKSYLADGLISKSRYDNYLML 278 Query: 333 LESMAQVKTRK 343 E + + + K Sbjct: 279 FEEVKKRRENK 289 >UniRef50_C7H5I2 Ribosome small subunit-dependent GTPase A n=8 Tax=Bacteria RepID=C7H5I2_9FIRM Length = 303 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 92/323 (28%), Positives = 145/323 (44%), Gaps = 32/323 (9%) Query: 30 DYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGK 85 + L E +G ++ G V++ +G V C R R V GD V Sbjct: 2 ERAAVLREERMKGYIVKGIGGFYYVKTEEG-VIECKPRGIFRKQKITPVAGDEVTLE--- 57 Query: 86 PAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRY 144 N ++ + R +V RP AN+D + +V++ P S ++D+ Sbjct: 58 ----TENGAAVIAEIAPRKNVFVRP--------PVANLDVLFLVASTTQPTPSTLVLDKL 105 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 ++P+IV K DL V Y + + + +GL + + Sbjct: 106 SAIAVDKGVQPVIVCTKADL------GEVEFLRSAYERSTLPFIAIRYDSGEGLDEVRQW 159 Query: 205 LTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 ++GR+ F G SGVGKS+LLN LL Q E T+ IS G G+HTT ++ GG + Sbjct: 160 ISGRLCAFCGNSGVGKSTLLNTLLP-QAERETSAISQKLGRGRHTTREVTIFE-AFGGRI 217 Query: 265 IDSPGVREFGLW---HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI 321 D+PG + E + F EF YLG C++ C H T+ GCAIR A+ EGK+ Sbjct: 218 ADTPGFASLEANRAGFIPKENLEHAFPEFGPYLGQCQFTGCSHRTEKGCAIRAALAEGKL 277 Query: 322 AETRFENYHRILESMAQVKTRKN 344 ++TR+++Y + E + VK + Sbjct: 278 SQTRYDSYCAMYEEVKDVKDWQR 300 >UniRef50_A6DJW3 Ribosome-associated GTPase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJW3_9BACT Length = 400 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 177/348 (50%), Gaps = 22/348 (6%) Query: 4 NKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDV-- 61 ++++K + + ++ ++ + + E EG+V S + A G++ Sbjct: 63 SRMAKQKPDALEDWTRKAMELADSMNTLEKESERELFEGVVKSISRGGGILRGAHGEITF 122 Query: 62 ----HRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY--DG 115 +++T + G+ V + + +VE + +R S+ +RPD Sbjct: 123 FLKSELAMLQKTG--VSVGEEVYYSMKD------DGSALVERIAKRKSIFSRPDPLRPKI 174 Query: 116 VKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 + IA NID + +VS++ P + IDR L+ E ++ LNK+DL + E V Sbjct: 175 ERVIAVNIDYVCMVSSLDSPVFNPFFIDRVLIGARQSGAEFVLCLNKMDL-EVEDKEQVL 233 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 +++D YR +G + VS+H + G+ L+ L G+ S+F G SGVGKSSLLNA+ +I Sbjct: 234 KELDYYRQLGVSIFEVSAHDEQGIDDLKLFLKGKKSVFVGTSGVGKSSLLNAISP-DLDI 292 Query: 235 LTNDISDNS-GLGQHTTTAARLYHF-PHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD 292 T + + + G G+HTT + ++ +ID+PG REF L + +++ F EF Sbjct: 293 KTQETREKAGGRGRHTTVMSTFHYLEDDDLYIIDTPGFREFNLMEISKDELKFYFPEFDG 352 Query: 293 YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 CK+ +C+H + GC + +A++ G I E R+++Y RIL+++ + + Sbjct: 353 L-ESCKFSNCQHIHEVGCVVLDALDNGDIYERRYDSYLRILDTLPKSE 399 >UniRef50_Q2JW76 Ribosome small subunit-dependent GTPase A n=2 Tax=Synechococcus RepID=Q2JW76_SYNJA Length = 363 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 94/341 (27%), Positives = 149/341 (43%), Gaps = 45/341 (13%) Query: 26 KEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDV--------------------HRCN 65 + + G G V + V D ++ C Sbjct: 2 SHRSAVQEEGQGSTCTGWVRAAQANFYRVR-IDPELAALFPEIEAHFPAQKPMPAELLCT 60 Query: 66 IRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAA 121 R ++ ++ GD V A +G +EA+ R + L RP A Sbjct: 61 ARAKLKKMGQSVMVGDWVEVSLPPAADSLWPERGAIEAILPRRTQLPRPA--------IA 112 Query: 122 NIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY 180 NI Q+++V A+ PE N + R LV E + +V NK D ++ +++ Sbjct: 113 NITQVLVVMALAEPEPEPNALSRLLVQAEASHLRVQVVFNKCDCVEAAVAESWRQRL--- 169 Query: 181 RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDIS 240 + GY L+VS+ T+ G+ L +IS+ AG SGVGKSSLLN LL ++ T +S Sbjct: 170 QRWGYEPLLVSALTEAGIPELRRRCRDQISVVAGPSGVGKSSLLNRLLPA-VQLTTQAVS 228 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE-FGLWHLEPEQITQGFVEFHDYLGLCKY 299 + G+HTT L+ P GG + DSPG G+ + P+Q+ + F E + LG C++ Sbjct: 229 EKLRQGRHTTRHVELFPLPEGGWIADSPGFNAGEGIPPVSPQQLIRCFPEVRERLGTCQF 288 Query: 300 RDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 RDC HD +PGC +RE + R Y ++L + + + Sbjct: 289 RDCLHDREPGCGLRE------LDWERRGFYLQLLHELQEAQ 323 >UniRef50_B5JHE4 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHE4_9BACT Length = 374 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 96/331 (29%), Positives = 145/331 (43%), Gaps = 26/331 (7%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIR--------SLVTGDRVVWR 82 +D G VI V + + V + R GD + Sbjct: 18 FDAVNDGTLVPARVIRENRGEYIVNTGE-RVGVARLPGIERLGKLDSAAYPTVGDWLALE 76 Query: 83 PGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNI 140 + +V + R S+ R + + I AN D + +V+ + + + Sbjct: 77 EIAGGED-----FLVRSFLPRASLFERKVVGESTRHQSIVANFDSLFLVTGLDEDFKTSR 131 Query: 141 IDRYLVACETLQIEPIIVLNKIDLLDD--EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGL 198 I RYL + E +IVLNK DL DD E + V + V VS+H + L Sbjct: 132 IQRYLSLAWNSRRELVIVLNKADLRDDLPEVLEAVEKVAGE-----VPVHAVSAHDRSSL 186 Query: 199 KPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 + L L GR G SGVGKSSL+NA LG + + T G G+HTTT L Sbjct: 187 ECLFGYLGKGRTVALLGSSGVGKSSLVNAFLGEDR-LPTQQNRAADGRGRHTTTWRELQM 245 Query: 258 FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVE 317 P GG +ID PG+RE L E + + + F + + + CK+R+C+HD +PGCAI A+E Sbjct: 246 IPSGGVLIDLPGMRELQLTG-EGDGVVKAFEDVEELMLRCKFRNCRHDGEPGCAIEAAIE 304 Query: 318 EGKIAETRFENYHRILESMAQVKTRKNFSDT 348 G++ +R++ Y ++ E A R+ D Sbjct: 305 SGELDASRYQQYVKLNEEHAVAHARREARDK 335 >UniRef50_D0LVG1 Ribosome small subunit-dependent GTPase A n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LVG1_HALO1 Length = 341 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 85/326 (26%), Positives = 137/326 (42%), Gaps = 18/326 (5%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVH--------RCNIRRTIRSLVTGDRV 79 + V + + A+G + R R R GD V Sbjct: 20 AAQHRQLDDPTLVCARVAIEYQDRYHLLGAEGPLWAQLSGGMLRAAKRERQRRPAVGDWV 79 Query: 80 VWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELS 137 +P + G V + +R + R V+ +AANID IV+A + + Sbjct: 80 AVQPAVG-----DGMGTVVHLFDRRTRFLRQAAGRRPVVQVVAANIDAAFIVTAFGHDFN 134 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 ++RYL ++VLNK D DE G VL S+ G Sbjct: 135 PRRLERYLTCVGESGARAVLVLNKRDQAADEDEIAARIAEVRAVAAGAPVLCTSATEGRG 194 Query: 198 LKPLEEAL-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 L L + + + G SGVGKSSL+N L+ + + T + + G G+HTTT L Sbjct: 195 LDELRAEIASHETAALVGSSGVGKSSLVNWLMAAEVQ-RTAPVRERDGRGRHTTTHRELM 253 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAV 316 P GG +ID+PG+RE L+ + + + F + C++RDC+H +PGC +R+A+ Sbjct: 254 LLPGGGLLIDTPGMRELQLFSA-ADALREAFADIASLSESCRFRDCRHRDEPGCEVRQAL 312 Query: 317 EEGKIAETRFENYHRILESMAQVKTR 342 G++A R+E + ++ + R Sbjct: 313 HRGRLARERYEGFCKLQGELEAAGAR 338 >UniRef50_B9NLX8 Ribosome small subunit-dependent GTPase A n=2 Tax=Rhodobacteraceae RepID=B9NLX8_9RHOB Length = 359 Score = 263 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 76/327 (23%), Positives = 136/327 (41%), Gaps = 23/327 (7%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPA 87 + + G P + + S DG+ + GD V+ Sbjct: 32 AAQHAADPTGLPF--RITAVHRDRLIGLSPDGEAPLLTPGEPTGTYAVGDWVL------- 82 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYL 145 + G V + +R S+L R + IAAN+D + I S+ + +L ++RYL Sbjct: 83 ---TDETGRVRHLLDRRSLLQRRAAGTGATAQLIAANVDVLFIASSCNADFNLPRLERYL 139 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNE-QMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 P+IVL K D+ DD + + VL +++ ++ Sbjct: 140 ALAHQAGCYPVIVLTKSDMCDDTESYVQQAGALAPF----LTVLAINALDPADIEQALAW 195 Query: 205 LTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 + G SGVGK++L N + G + T+ I ++ G+HTTTA L+ +GG Sbjct: 196 CPKGQTGALVGSSGVGKTTLANGMTGQD--LATSGIREDDARGRHTTTARALHRMRNGGW 253 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 +ID+PG+R L + + + F + + C++ DC+HDT+P CA++ A+ G + Sbjct: 254 LIDTPGMRALRLLDA-RDGVDEVFSDISELSLSCRFSDCQHDTEPDCAVQAAISNGVLDP 312 Query: 324 TRFENYHRILESMAQVKTRKNFSDTDD 350 R E + ++ + + D Sbjct: 313 ARLERWRKLRREDQRNSASVAQARARD 339 >UniRef50_D2B3W4 Ribosome-associated GTPase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3W4_STRRD Length = 372 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 90/346 (26%), Positives = 146/346 (42%), Gaps = 36/346 (10%) Query: 31 YDDNLFGEPDEG----IVISRFGMHADVESADG--------DVHRCNIRRTIRSLVTGDR 78 ++D+L E G V A+V SADG V R + GD Sbjct: 17 WNDSLAAELPAGLVPARVARVDRGAAEVLSADGHSQAHYSAQVRRAAAADPVALPCVGDW 76 Query: 79 VVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDF----------YDGVKPIAANIDQIVI 128 R + +EAV R + R + +AAN+D + + Sbjct: 77 AALRRLPEG------RFELEAVLPRRTAFVRGGVARVSRGGLSGDSQGQVLAANVDVVFV 130 Query: 129 VSAILPELS---LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGY 185 L L I+R L P++++ K DL+ + + E G Sbjct: 131 AEPALHATDTADLGRIERLLALAWESGGLPVVLVTKSDLVGEGLDFLMGEVAA--AAPGV 188 Query: 186 RVLMVSSHTQDGLKPLEEALT-GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSG 244 V V S T +G++ + L R ++ G SG GKS+L+NAL G + T + G Sbjct: 189 DVHPVCSVTGEGVEIVRGYLEGRRTAVVLGASGAGKSTLVNALAGGNV-METQQVRAGDG 247 Query: 245 LGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKH 304 G+HTT L GG +ID+PG+R GL+ + E + F + D C++ DC H Sbjct: 248 RGRHTTVHRELIPLKDGGLIIDTPGIRRVGLYDMG-EGVDMVFSDIEDLAERCRFADCGH 306 Query: 305 DTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 D++PGCA+ A+E+G + E R E+++++ A + +R + + Sbjct: 307 DSEPGCAVIAAIEDGTLPERRLESWNKLQREAAWMASRSDARLRKE 352 >UniRef50_B0MPP3 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPP3_9FIRM Length = 298 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 31/311 (9%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 EGI+ G + V ADG V CN R R GD V+ + A + Sbjct: 7 EGIITKAVGGNYYVAVADG-VLCCNARGVFRKEKISPCAGDNVIVSIEENAVP------L 59 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQIEP 155 + + ER + + RP AN+D ++V+ A+ P + + D+ + E+ IEP Sbjct: 60 IVEIKERKNHIIRPPL--------ANLDCALLVTSAVDPVPNTLVTDKLISIFESKHIEP 111 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 +IV+ K DL + IYR G++V + + T +G+ + ++G++S G Sbjct: 112 VIVITKQDL------RECEDFAGIYRKCGFKVFYMDNSTGNGIDAIRSYISGKLSALIGN 165 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGKSSL+N L E T DIS G G+HTT A L+ GG + D+PG + Sbjct: 166 SGVGKSSLMNHLFPG-LERSTGDISKKLGRGRHTTRQAELFAID-GGYIADTPGFSTVEV 223 Query: 276 W---HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + ++ F EF +YLG C++RDC H + GCA+ EA+ EGKI +R+++Y ++ Sbjct: 224 SRYGFIPKNELQYSFREFSEYLGKCRFRDCVHLKESGCAVTEALREGKINSSRYDSYVKM 283 Query: 333 LESMAQVKTRK 343 E ++ + Sbjct: 284 CEEAERLNEWE 294 >UniRef50_C4G9D9 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9D9_9FIRM Length = 355 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 92/369 (24%), Positives = 151/369 (40%), Gaps = 84/369 (22%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 +G +I V ++ C R R V GD V + V+ +G Sbjct: 2 QGKIIKGIAGFYYVYVRGRGIYECKARGAFRKKKIKPVAGDAVEIEI----TDPVDAEGN 57 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 + ++ ER S+L RP AN+DQ +++ A P + N++DR+LV E +I Sbjct: 58 IVSIAERRSLLIRPA--------VANVDQALVIFAARKPMPNFNLLDRFLVMMEQAEIPT 109 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 I+ NK+DL+D E + IY Y + +S+ GL + L+ R + AG Sbjct: 110 TILFNKVDLVDREEIER---IRRIYAASAYPIHFMSAKENLGLDEIRRQLSNRTTTVAGP 166 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHF----------------- 258 SGVGKSSL+N L + + T IS G G+HTT + L Sbjct: 167 SGVGKSSLINRLQSATR-MQTAGISVKLGRGRHTTRHSELIPLEGEPSAVEGCLNTGGKG 225 Query: 259 ---PHGG-------------DVIDSPGVREFGLWHLEPE--------------------- 281 P GG + D V E + E Sbjct: 226 EAEPSGGTGDPAGRFRVNRHFIEDEARVLEEDSPEMICEEIRGRYQGARGFIVDTPGFSS 285 Query: 282 ---------QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + F EF Y+ C+++ C H +P CA+R+A++ GKI+++R+++Y ++ Sbjct: 286 LYVPDFEKEDLAFYFPEFLPYMNACRFQPCTHTHEPQCAVRKALDRGKISQSRYDSYLQM 345 Query: 333 LESMAQVKT 341 E +++ + Sbjct: 346 YEELSERRR 354 >UniRef50_C4V0Q2 Ribosome-associated GTP-binding protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0Q2_9FIRM Length = 288 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 97/308 (31%), Positives = 149/308 (48%), Gaps = 28/308 (9%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRT----IRSLVTGDRVVWRPGKPAAEGVNVKG 95 G ++ + V ++ C +R +L+ GD V +G Sbjct: 3 QYGRILKVYNSVIHVSVNSAEIL-CKLRGKSTRGRDALLPGDIVRLERISS------TEG 55 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVI-VSAILPELSLNIIDRYLVACETLQI- 153 ++E RTS+L RP AN+ QIV+ V+A P ++ R+LV E I Sbjct: 56 VIEGTEPRTSLLLRPR--------VANLTQIVVTVAAAAPNPHPLVVSRFLVLAEHSGID 107 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 ++ +NKIDL F Y GY VL+VS+ GL L+E L G I++FA Sbjct: 108 HIVLCINKIDLAGGNMTEFCT----PYEAAGYPVLLVSAVNGTGLSALQERLAGEITVFA 163 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SG GKSSLLNA + + +S+ G G+HTT A L F GG V+D+PG + Sbjct: 164 GPSGAGKSSLLNA-MDSSLALAVGAVSEKIGRGRHTTRRAELLPF-AGGYVVDTPGFTQQ 221 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 L + +++ F EF + C++ C H +P CA++ A EEG++A TR++ Y +L Sbjct: 222 ELTGIAADELADCFPEFLHF-PGCRFTPCSHSHEPNCAVKAAAEEGRLACTRYDAYIALL 280 Query: 334 ESMAQVKT 341 + + V+ Sbjct: 281 DEIRSVRR 288 >UniRef50_Q30WI2 GTPase n=2 Tax=Deltaproteobacteria RepID=Q30WI2_DESDG Length = 354 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 79/324 (24%), Positives = 135/324 (41%), Gaps = 26/324 (8%) Query: 37 GEPDEGIVISRFGMHADVESADGDVHRCNIR-----RTIRSLVTGDRVVWRPGKPAAEGV 91 E V + + +G V GD ++ Sbjct: 27 EEALPARVAGLNRHILGLVTENGPVQAAVPGSWYTGGPEDVPTVGDWLLLDRRTSQP--- 83 Query: 92 NVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACE 149 + ER S L R ++ +AANID + IV++ + + + I+RYL Sbjct: 84 ------VRLLERKSFLHRRAAGREAKIQALAANIDTLFIVTSCNDDFNPSRIERYLTLAM 137 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-R 208 + P++V+ K DL+ D F+ I +++ V ++++ LE + Sbjct: 138 GSGVTPVLVITKADLVADAD-EFIGRAKAIRQDL--DVCVLNALDAGSAAVLENWCGKGQ 194 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 AG SGVGKS+L+N L G + T I ++ G+HTTT L+ P G +ID+P Sbjct: 195 TLALAGSSGVGKSTLVNTLQGEHIQ-STGAIREHDARGRHTTTGRSLHMLPSGAVLIDTP 253 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G+RE L + + + F + C++ DC HD + GCA++ AV G++ R EN Sbjct: 254 GIRELQLADVG-QGLASAFDDIEQLAAGCRFNDCTHDHESGCAVQAAVLSGELELRRLEN 312 Query: 329 YHRILESMAQV----KTRKNFSDT 348 Y +I +++ + Sbjct: 313 YRKIRAEQQHNALSVAEKRDKARK 336 >UniRef50_D2AX52 Ribosome-associated GTPase n=3 Tax=Actinomycetales RepID=D2AX52_STRRD Length = 360 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 132/320 (41%), Gaps = 20/320 (6%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNIR----RTIRSLVTGDRVVWRPGKPAA 88 ++ + D + G V + + TGD R G+ Sbjct: 28 EHREAGLVPARIARVDRGLCDAVTESGPVRAALTALYSPDPLLAPCTGDWAALRWGREPE 87 Query: 89 EGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLV 146 + A+ R S + R + +AAN+D +V+ ++ L ++R L Sbjct: 88 --------LVALLPRRSAIVRSSASRTSHAQVLAANVDTVVLAVSLTTPLDAARLERLLA 139 Query: 147 ACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT 206 P+IVL K D A G +L+ S+ T + L L Sbjct: 140 LAWDSGARPLIVLTK---ADLAADAAAVHAETSTLAPGVDILITSAATGQNIDVLTALL- 195 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVID 266 ++ G SG GKS L NALLG + + T ++ G G+HTT L P GG +ID Sbjct: 196 SGTTVLLGSSGAGKSRLGNALLGDEL-LATGEVRAQDGKGRHTTVRRELVPLPGGGVLID 254 Query: 267 SPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 +PG+R L+ + + Q F E C++ DC HDT+PGCA++ A++ G++ E R Sbjct: 255 TPGLRGISLYDA-ADGLEQVFAEIERLAQDCRFGDCSHDTEPGCAVQAAIQAGELTERRL 313 Query: 327 ENYHRILESMAQVKTRKNFS 346 NY ++ A +R + Sbjct: 314 GNYRKLQRENAWAASRTDAR 333 >UniRef50_C6BWU3 GTPase EngC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWU3_DESAD Length = 345 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 23/315 (7%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTI-----RSLVTGDRVVWRPGKPA 87 D E V H V + ++ I GD ++ Sbjct: 22 DTDDTEMIPARVTMTHKGHLVVSTGHSELLL-KIAGKGIGSLNEQPTVGDWLLMDRETMV 80 Query: 88 AEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYL 145 V ERTS+L R P ++PIAANID + IVS+ E +LN I+RY+ Sbjct: 81 P---------VKVLERTSLLQRMAPGQEVKLQPIAANIDTLFIVSSCNTEFNLNRIERYI 131 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 + ++VL K DL +E + + ++ ++ ++ ++ ++ L++ Sbjct: 132 CLALEAGVNFVLVLTKEDL-TEEAQEYRKQAEHLFESM--PIVTINGKDPQSVQSLQKWF 188 Query: 206 TG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 G SGVGK++LLN + G +KE T I G+HTTT L+ P G + Sbjct: 189 KPGETVALLGSSGVGKTTLLNTINGTEKE-KTGAIRHGDDKGRHTTTTRSLHVMPSGALL 247 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID PG+RE L I + F E + +C++ DC H+ +PGC +REA+E I Sbjct: 248 IDVPGIRELQLHDCHA-GIDRAFSEIVEAEEMCRFSDCSHEREPGCGVREALESKIITRR 306 Query: 325 RFENYHRILESMAQV 339 R +NY ++ E + Sbjct: 307 RLDNYLKLKEEAEKN 321 >UniRef50_O66555 Putative ribosome biogenesis GTPase rsgA n=7 Tax=Bacteria RepID=RSGA_AQUAE Length = 302 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 109/315 (34%), Positives = 163/315 (51%), Gaps = 28/315 (8%) Query: 38 EPDEGIVISRFGMHADV-ESADGDVHRCNIRRT---IRSLVTGDRVVWRPGKPAAEGVNV 93 E G+V+ R V DG +R R + GD V Sbjct: 5 ELKRGLVVDREAQMIGVYLFEDGKTYRGIPRGKVLKKTKINAGDYVW------GEVVDPN 58 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQ 152 +E V ER ++L RP AN+D+++IV + PE + ++D LV E + Sbjct: 59 TFAIEEVEERKNLLIRPK--------VANVDRVIIVETLKMPEFNNYLLDNMLVVYEYFK 110 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 +EP+IV NKIDLL++E + IYR+ GY VL VS+ T +G+ L + L G I I Sbjct: 111 VEPVIVFNKIDLLNEEEKKELERMDSIYRDAGYDVLKVSAKTGEGIDELVDYLEGFICIL 170 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SGVGKSS+L+ L G + + T ++S+ + G+HTTT RL F G V D+PG + Sbjct: 171 AGPSGVGKSSILSRLTGEE--LRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTPGFSK 228 Query: 273 FG-LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 ++P ++ F EF Y CKY DC H +PGCA++EAV+ G+I+ R+++Y + Sbjct: 229 VEATMFVKPREVRNYFREFLRY--QCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLK 286 Query: 332 I----LESMAQVKTR 342 I LE + ++ Sbjct: 287 IIKVYLEEIKELCRE 301 >UniRef50_B3EHA2 GTPase EngC n=4 Tax=Bacteria RepID=B3EHA2_CHLL2 Length = 356 Score = 260 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 85/336 (25%), Positives = 140/336 (41%), Gaps = 31/336 (9%) Query: 30 DYDDNLFGEPDE-GIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVV 80 + D + E V + + + G++ + GD V Sbjct: 15 THADAIRSEGQSVARVSAVDRNSCMIRNEQGEI-PAELSGKFLFNVESPADLPCVGDWVA 73 Query: 81 WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSL 138 + A I+ + R + L R V + IAANID +V + + +L Sbjct: 74 VQYHNDGA-----LAIIHGLFPRRTFLRRKRAGTEVDYQMIAANIDIAFVVQSCHFDFNL 128 Query: 139 NIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGY--RVLMVSSHTQD 196 ++RYLV +E I+VL K DL+ E + E++ R G RV+ +S+ Sbjct: 129 ARLNRYLVMAADGHVESIVVLAKTDLISGEEL---QEKLAAIREAGISARVIALSNLNGS 185 Query: 197 GLKPLEEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARL 255 G + + L R G SGVGK++L+N L+G + T +S TT +L Sbjct: 186 GFEEFRQLLLPRGTYCLLGSSGVGKTTLINHLIGRD-DFDTKAVSGTGEGTHTTTR-RQL 243 Query: 256 YHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREA 315 G ID+PG+RE GL E + +GF + C+Y DC H + GCA+ A Sbjct: 244 IVLDEGSMFIDTPGMRELGLLGAS-EGVNKGFEDITGLSRACRYADCSHTGESGCAVLAA 302 Query: 316 VEEGKIAETRFENYHRI-----LESMAQVKTRKNFS 346 +E G+++E R+ Y ++ ++ + RK Sbjct: 303 IEAGELSEERYAGYLKLRKESEYHELSYLDKRKKER 338 >UniRef50_C7HYF6 Ribosome small subunit-dependent GTPase A n=1 Tax=Thiomonas intermedia K12 RepID=C7HYF6_THIIN Length = 321 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 109/339 (32%), Positives = 161/339 (47%), Gaps = 24/339 (7%) Query: 9 GQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRR 68 R N + +++K P L ++ FG H + DG V C R Sbjct: 2 DDLERHNPQRPKGKRSTKSAPSTASGL-----TARIVGAFGRHYLAQLDDGSVLACVPRG 56 Query: 69 TIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVI 128 +V GDRV PG +E VH R + L R D + K AAN+D++++ Sbjct: 57 KRAEVVCGDRVTLAPGDAPLA-------IEQVHARRNALWREDLW-RSKMFAANLDRVML 108 Query: 129 VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL 188 V+A P + +I R L+A + I ++LNK DL A +M +YR++GY +L Sbjct: 109 VTATYPGIQHGLIGRALIAADAADIPSTLLLNKCDL---PQAAAARAEMRLYRDLGYELL 165 Query: 189 MVSSHTQ--DGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLG 246 +S T+ L L L+G+ ++ G SGVGKSSL N LL Q + T +IS+ G Sbjct: 166 ELSVRTEPQAALAALTPRLSGQTTLLLGASGVGKSSLTN-LLAPQAQAPTREISEALSAG 224 Query: 247 QHTTTAARLYHFPH---GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 +HTTTA RLY P G ++DSPG + FGL HL Q+ GF E G C++++C Sbjct: 225 KHTTTATRLYDLPGFPPGSVLMDSPGFQSFGLHHLSVSQLQHGFPEIRARNGQCRFQNCT 284 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTR 342 H +PGC + I+ +R Y + + R Sbjct: 285 HRDEPGCVFTTDPQA--ISASRLALYRTLYAELTSAAPR 321 >UniRef50_C8PML9 Ribosome small subunit-dependent GTPase A n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PML9_9SPIO Length = 316 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 27/315 (8%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVN 92 +G+V+S V + +G+V RC+I+ L GD V + Sbjct: 2 QGLVLSGANNFFVVRTPEGNVVRCSIKGKKLKEIRGYYNPLAPGDTVDIEYDTLHPD--- 58 Query: 93 VKGIVEAVHERTSVLTRPDFYDGV-KPIAANIDQIVIVSAI-LPELSLNIIDRYLVACET 150 +G + A+ R + R + + +AANID ++ V+ P DR LV Sbjct: 59 -QGQITALVPRRNGFIRWNQKTRSPQLLAANIDLLLCVTTPANPPFRPRFTDRTLVQAAA 117 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 I +I++NKIDL E V E++ ++ IG +V VS+ T++GL+PL L+G+ Sbjct: 118 EGISALIIVNKIDLGIPE---AVRERIRDWQRIGIQVCEVSAKTREGLEPLARLLSGKTC 174 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPH--------GG 262 GQSGVGKSSLLN+L + T DIS G HTTT Sbjct: 175 AVTGQSGVGKSSLLNSLDPCHA-LKTADISFKYDRGIHTTTQGVFLPMTFTAQDGTQLSF 233 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR-DCKHDTDPGCAIREAVEEGKI 321 ++ID+PG+R F LW ++PE++ F E C + C H + GC I E + G+I Sbjct: 234 NIIDTPGIRHFALWGIKPEEVIFYFPEMEAPALQCAFGLSCSHIHEQGCRILEELNAGRI 293 Query: 322 AETRFENYHRILESM 336 R+E++ + + + Sbjct: 294 HPDRYESWRSMRDEL 308 >UniRef50_Q2SSL6 Ribosome small subunit-dependent GTPase A n=4 Tax=Mollicutes RepID=Q2SSL6_MYCCT Length = 300 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 86/314 (27%), Positives = 164/314 (52%), Gaps = 25/314 (7%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS---LVTGDRVVWRPGKPAAEGVNVKGIV 97 +GI++ + + V + +++ + ++ GD V + + + G + Sbjct: 2 QGILVKKDSNESYV-FYENKIYKVYAKGNLKKELKPKVGDVVEF------SILEDGYGYI 54 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPI 156 + + R + L RP AN+DQ++IV+A+ P S ++++Y++ ETL+I+PI Sbjct: 55 KEIKPRKNSLDRPK--------IANVDQVLIVTALYEPLFSSFLLNKYIMMLETLKIKPI 106 Query: 157 IVLNKIDLLDDEGM-AFVNEQMDIYRNIGYRVLMVSSH-----TQDGLKPLEEALTGRIS 210 ++ K+DLL + V +++ Y + Y+VL++++ + L+E L +IS Sbjct: 107 LIFTKVDLLKESSYYQEVMHKINWYEKMHYQVLIINNKDNLENKNTIILKLKELLKNKIS 166 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 +F GQ+G GKS+ LN L + K+I TN+IS G+HTTT+ +LY+ + + D+PG Sbjct: 167 VFTGQTGAGKSTTLNNFLDINKQIKTNEISKKLNRGKHTTTSIQLYNLENNIFIADTPGF 226 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYH 330 F L +++ E I + F +L CK+ DC H + C +++AV E + + +Y Sbjct: 227 SAFDLNNIDIEHILYSWETFIPFLNKCKFVDCTHTHETKCVVKKAVAEHLLPTFIYNDYV 286 Query: 331 RILESMAQVKTRKN 344 ++ E + Q + K Sbjct: 287 KVYEELKQNRKNKY 300 >UniRef50_Q8YUA3 Putative ribosome biogenesis GTPase rsgA 1 n=19 Tax=Cyanobacteria RepID=RSGA1_ANASP Length = 370 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 55/324 (16%) Query: 42 GIVISRFGMHADVESAD----------GD------------------VHRCNIRRTIRSL 73 G V++ V+ G+ R +++ + + Sbjct: 11 GTVVAVQANFYKVQLDQEVREQGSRGAGEEVHLDSPLPLCPLSLLLCTRRTRLKKIGQQV 70 Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI- 132 + GDRVV + +G + V R + L RP AN DQI++V A+ Sbjct: 71 MVGDRVVVEE----PDWAGGRGAIADVLSRQTQLDRP--------PIANADQILLVFAVA 118 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS 192 P L + R+LV ET ++ ++ LNK DL+ E +++++ GY+ L +S Sbjct: 119 DPPLEPYQLSRFLVKAETTGLDVVLCLNKSDLVSPEIQQQISDRLL---AWGYQPLFISV 175 Query: 193 HTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTA 252 Q + + + L+ +I++ AG SGVGKSSL+NAL+ + ++S G+HTT Sbjct: 176 ENQINIDQIAKYLSNKITVVAGPSGVGKSSLINALIP-NINLRVGEVSGKLARGRHTTRH 234 Query: 253 ARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD--YLGLCKYRDCKHDTDPGC 310 L+ P+GG + D+PG + + PE++ F E + + C++ DC H +P C Sbjct: 235 VELFELPNGGLLADTPGFNQPDV-DCSPEELVHYFPEARERLAIASCRFNDCSHRDEPDC 293 Query: 311 AIREAVEEGKIAETRFENYHRILE 334 A+R E R+E+Y L Sbjct: 294 AVRGDWE-------RYEHYLEFLA 310 >UniRef50_B0JW21 Putative ribosome biogenesis GTPase rsgA n=8 Tax=Cyanobacteria RepID=RSGA_MICAN Length = 358 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 91/319 (28%), Positives = 146/319 (45%), Gaps = 34/319 (10%) Query: 42 GIVISRFGMHADVESAD---GDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVK 94 G V++ V G+ C R ++ ++ GDRV + + Sbjct: 11 GTVVAVQANFYQVRLDSAVMGENLLCTRRARLQKIGQSVMVGDRVRVEEANFG----DQQ 66 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G + V R++ + RP ANI+QI++V A+ P L +I R+LV E+ + Sbjct: 67 GAIAEVLPRSTEIDRPA--------VANIEQILLVFALAEPVLDPWLISRFLVKAESTGL 118 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 E + +NKIDL + E + +++ GYR VS G + L L +I++ A Sbjct: 119 EIAVCVNKIDLGEPEQIEVWGDRLA---GWGYRPFFVSVEKNRGFEALLAQLNHKITLLA 175 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKSSL+N L+ + D+S G+HTT +L+ P+ G + DSPG + Sbjct: 176 GPSGVGKSSLINCLIP-EINQRVGDVSGKLQKGRHTTRHVQLFALPNRGLLADSPGFNQP 234 Query: 274 GLWHLEPEQITQGFVEFHD--YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 + L PE++T F E LG C++ DC H +P C +R E R+++Y Sbjct: 235 DINCL-PEELTFYFPEVRARLALGNCQFNDCTHRREPNCVVRGDWE-------RYQHYLE 286 Query: 332 ILESMAQVKTRKNFSDTDD 350 LE + + T + Sbjct: 287 FLEEAIAREQSLQKTSTKE 305 >UniRef50_C8NZ87 Ribosome small subunit-dependent GTPase A n=4 Tax=Erysipelotrichaceae RepID=C8NZ87_ERYRH Length = 284 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 94/307 (30%), Positives = 147/307 (47%), Gaps = 27/307 (8%) Query: 39 PDEGIVISRFGMHADVESADGDVHRCNIRRTIR---SLVTGDRVVWRPGKPAAEGVNVKG 95 E ++ V G+ +R + GD V E ++ K Sbjct: 1 MREAVITRIVSNRYSVYFE-GEFIIATAMGKLRLGDKPIVGDHV-------HIEELDGKW 52 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVS-AILPELSLNIIDRYLVACETLQIE 154 +++ V R + L RP + AN+DQ +IV A P+ S +++R + I Sbjct: 53 VIQQVLPRRNQLIRP--------LVANVDQALIVMSAKEPDFSFTLVNRLIFLVSLQNIN 104 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 PII+++K DL D A +D Y GY V+M S LE + +IS+ AG Sbjct: 105 PIIIVSKGDLADS---ALKQSILDEYEQYGYTVIM--SGKDISTDALESVMENKISVLAG 159 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 QSGVGKSS+LN + E+ T +IS G G+HTT ++Y GG + D+PG Sbjct: 160 QSGVGKSSILNRIS-DDLELNTQEISKALGRGRHTTRHNQIYPLC-GGWIADTPGFSSLD 217 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 ++P +++Q +F ++G CKYRDC H +PGC I+E VE G+I++ R ++Y L Sbjct: 218 FSSVDPVELSQSIPDFVPFIGNCKYRDCMHIQEPGCIIKEKVESGEISKQRHQDYLDCLT 277 Query: 335 SMAQVKT 341 + + Sbjct: 278 LIKEESR 284 >UniRef50_A6GEV4 Ribosome-associated GTPase n=2 Tax=Deltaproteobacteria RepID=A6GEV4_9DELT Length = 340 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 172/350 (49%), Gaps = 32/350 (9%) Query: 3 KNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVH 62 + K + + R RR ++ + +D++ GE G++++ G+ DV G+ Sbjct: 5 QRKRQQTRAGRSGRGSSRRARSLQLAAGAEDDVAGE--PGVLVAHHGVAVDVRLRGGERR 62 Query: 63 RCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAAN 122 +RR+ V GDRV G ER S L R D V +AAN Sbjct: 63 PVKVRRSSGH-VVGDRVEV------------FGERLRRLERDSELRRRDAMGRVHVVAAN 109 Query: 123 IDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRN 182 +D + IV A P IDR LV+ + I+P++++NK DL D G + Sbjct: 110 LDVLGIVVAPKPGPPAGFIDRALVSAASSGIQPLLIVNKADL-DGAGALVAAVRRTFVEG 168 Query: 183 IG---YRVLMVSSHTQDGLKPLEEALT--GRISIFAGQSGVGKSSLLNALLGLQKEILTN 237 G +L VS+ T +GL+ + L F G SGVGKSSL+N LL + E+ Sbjct: 169 PGGVDLPLLEVSAKTGEGLEAILRFLAQGPHRGAFVGTSGVGKSSLVNTLLP-EVELEVG 227 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL- 296 I++ SGLG+HTTT A L+ GG++ID+PG R+FGL + ++++ F F D LG Sbjct: 228 AINELSGLGRHTTTTATLHPLSGGGELIDTPGFRDFGLVDIGVRELSRFFPGFADILGTD 287 Query: 297 ---------CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 C++ DC+H +PGCAI EAV EG +A R+E Y +L + Sbjct: 288 ASGHDSKHACRFNDCRHLVEPGCAILEAVAEGALARARWERYRDLLTELE 337 >UniRef50_Q2BLA6 GTPase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLA6_9GAMM Length = 356 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 128/282 (45%), Gaps = 18/282 (6%) Query: 72 SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIV 129 GD ++ ER + + R ++ IAANID + I Sbjct: 69 HPTVGDWLMLDSDFQP----------VKRLERKTRIQRRAAGHQSYIQMIAANIDTLFIT 118 Query: 130 SAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLM 189 S+ + +LN I+RYL I ++VL K+DL +D + ++ + V + Sbjct: 119 SSCNDDFNLNRIERYLAIAAESHIHCVLVLTKMDLCNDPSVYLDQLKIS---HPSLSVEL 175 Query: 190 VSSHTQDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQH 248 V++ + + L + + + G SGVGKS+L+N L G + T I ++ G+H Sbjct: 176 VNAIDAESIAGLRQWIASGQTVALVGSSGVGKSTLINGLKGSD-DQETASIREHDSKGRH 234 Query: 249 TTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP 308 TTT+ L+ P GG ++D+PG+RE + I F + ++ C++ DC H +P Sbjct: 235 TTTSRSLHLLPQGGLLLDTPGMRELQIVD-SAAGINSAFDDINELARGCRFTDCTHHNEP 293 Query: 309 GCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 GC + +AVE G++ R NY ++L A+ D Sbjct: 294 GCTVVDAVEAGRLEPRRLFNYQKLLVEQARNNETLAERRQSD 335 >UniRef50_D1AJL1 Ribosome small subunit-dependent GTPase A n=2 Tax=Fusobacteriaceae RepID=D1AJL1_SEBTE Length = 293 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 87/311 (27%), Positives = 146/311 (46%), Gaps = 32/311 (10%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIR------SLVTGDRVVWRPGKPAAEGVNVK 94 +G VI + V S D +++ C +R ++ + + GD V + + A Sbjct: 2 KGRVIRKIKGFYYVNS-DNNIYECKLRGALKIKNDKLNCIVGDIVEFDEKEQA------- 53 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQI 153 + V ER + L RP + +NID I AI P+ + L+ I Sbjct: 54 --ICKVFERENYLDRP--------LISNIDYAGITFAIKSPDFDYTNFQKVLLNVYDRNI 103 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMD-IYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 P ++ K+DL+ D + + ++ + V V + L L E + G+I+ F Sbjct: 104 TPFVIFTKVDLISDTELKEFTDNFHMVFSTLELDVFPVIATDDTALSDLREFIAGKITAF 163 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 +G SGVGKS+L+N LL + T DIS+ + G+HTTT +R++ + ++D+PG Sbjct: 164 SGPSGVGKSTLINNLLNEDI-LRTGDISEKTDRGKHTTTESRIFELDNSTLIVDTPGFSS 222 Query: 273 FGLWHL-EPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 L E +++ F +F DY LCK+RDC H +P C ++ A+E KI + R+E Y Sbjct: 223 LDFPKLKEKTALSRLFPDFQDYSVLCKFRDCTHINEPECGVKSALENAKIPKLRYEFYLY 282 Query: 332 ----ILESMAQ 338 I + + Sbjct: 283 SYNNIFREVKK 293 >UniRef50_A6GTD7 Ribosome small subunit-dependent GTPase A n=1 Tax=Limnobacter sp. MED105 RepID=A6GTD7_9BURK Length = 330 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 85/330 (25%), Positives = 158/330 (47%), Gaps = 14/330 (4%) Query: 18 HQRRLKTSKEKPDYDDNLFGEPD--EGIVISRFGMHADVESADGDVHRCNIRRTIRSLVT 75 ++ R ++ G PD +V++ +G H G + + + R + Sbjct: 7 NKVRPTYKGKQTGNHGKNAGNPDLLNALVVASYGRHFLARDDSGTIWQVYGKGKRREVAV 66 Query: 76 GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPE 135 GD ++ P +++ VE + R +++ R D K AAN+D ++++ AI P Sbjct: 67 GDEIIILPSG------DMQAWVEDIQPRKNLVYRSDALKS-KMFAANLDGVLLMLAISPP 119 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLL--DDEGMAFVNEQMDIYRNIGYRVLMVSSH 193 S ++ R L AC+ ++ I+ NK+D+L D E + V +++ +S Sbjct: 120 YSPELLGRTLTACKHAEVPLTILFNKVDILEGDSETLEAVEQELFEITLGEVPTHYISVT 179 Query: 194 TQDGLKP--LEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTT 251 + L+ L G+ ++ GQSG+GKS+L+N L+ TN+IS G+HTTT Sbjct: 180 ERPSETETLLQPLLEGKRTLILGQSGMGKSTLINLLIPGAL-AATNEISMALNAGKHTTT 238 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 +++ G ++IDSPG + FGL HL + F + D C++ +C+H +P CA Sbjct: 239 HTQMHFGAQGLELIDSPGFQAFGLHHLSESDLLNAFTDIRDEGNKCRFANCQHKREPDCA 298 Query: 312 IREAVEEGKIAETRFENYHRILESMAQVKT 341 ++ +E+G ++ R+E Y + + + Sbjct: 299 VKNGLEDGTLSPARYELYQMLKAELEEASQ 328 >UniRef50_Q044G6 Putative ribosome biogenesis GTPase rsgA n=27 Tax=Lactobacillus RepID=RSGA_LACGA Length = 297 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 34/320 (10%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNV 93 +G ++S + DVE + +V R R R + GDRVV + Sbjct: 2 NKAQGTIVSAISGYYDVEIEN-EVVRTRARGVFRDRKQKPLVGDRVVVQLDNQGMN---- 56 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV-SAILPELSLNIIDRYLVACETLQ 152 + + RT+ + RP AN+ ++++V SA+ P+ SL ++DRYL Sbjct: 57 --YLIEILPRTNEIGRPA--------VANVSKVLLVISAVEPDFSLELLDRYLTFFAWKN 106 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALT-----G 207 + +I L+K D+ E + + ++D Y+ IGY V + + LE L Sbjct: 107 VGVVIYLSKADITPTEKLKAIKCKLDYYQKIGYSVF-------EDAEELERQLPTMIQKD 159 Query: 208 RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDS 267 +I AGQSG GKS+LLN L + T IS G+HTT +L+ + G + D+ Sbjct: 160 QIWTLAGQSGAGKSTLLNKL-ENEANQETGAISTALNRGKHTTRQVKLFKYSSG-FIADT 217 Query: 268 PGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFE 327 PG L+ ++ +++ F + D CK+R C+H +PGC +++ +EEGKIA++R++ Sbjct: 218 PGFSAIDLFKIKVDELENYFYDLKDASVKCKFRRCQHIKEPGCEVKKLIEEGKIAKSRYD 277 Query: 328 NYHRILESMAQVKTRKNFSD 347 +Y +I + +++ + + Sbjct: 278 SYLKIRQEISENRMPEYLKK 297 >UniRef50_A5IY02 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Mycoplasma RepID=RSGA_MYCAP Length = 281 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 144/308 (46%), Gaps = 35/308 (11%) Query: 41 EGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGI 96 +G + S ++ + + H R + GD V + K Sbjct: 2 KGKIYSINSGIYSIKDENNNFHNLPALGVFRHKNIVPLVGDYVEFEKEK----------Y 51 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEP 155 + ++ER + RP ANID I+IV +I PE ++D+Y+ E+ IEP Sbjct: 52 ITKIYERQNEFIRPK--------VANIDHIIIVMSIHEPEFQSFLVDKYMAFIESANIEP 103 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 ++ K DL + + Y ++GY+V +S T + +K + + T + ++ GQ Sbjct: 104 VLFNTKADLGTS-------KYKNEYESLGYKVYEISYKTDEWVKNIAKLFTNKTNVLMGQ 156 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SGVGK++L+N + G IS + G+HTT ++ + G++ID+PG + Sbjct: 157 SGVGKTTLVNKITGSN--FAVQAISKFANRGKHTTRIVQIVNVFDNGELIDTPGFSSLDI 214 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPG--CAIREAVEEGKIAETRFENYHRIL 333 +L +Q+ + +F + CK++ C H +P C I++AV++ I + R+ NY ++L Sbjct: 215 -NLTKQQLAYSYKQFKELGKFCKFKTCFHQNEPENFCNIKQAVKDNIIPQFRYNNYLKLL 273 Query: 334 ESMAQVKT 341 + + + Sbjct: 274 QEVENEQK 281 >UniRef50_Q98JM4 Putative ribosome biogenesis GTPase rsgA n=14 Tax=Alphaproteobacteria RepID=RSGA_RHILO Length = 346 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 78/315 (24%), Positives = 130/315 (41%), Gaps = 18/315 (5%) Query: 30 DYDDNLFGEPDEGIVISRFGMHADVESADGDV-HRCNIRRTIRSLVTGDRVVWRPGKPAA 88 D + + S G + T GD V+ P Sbjct: 25 DQLEASDANLIPTRIAMVHRDRLSGLSQTGQTDLSLAPQATTGDYAVGDWVLVEPHSH-- 82 Query: 89 EGVNVKGIVEAVHERTSVLTRPDFYDG-VKPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 +V+ R +VL R + AAN+D + IV++ + ++ ++RYL Sbjct: 83 -------LVQRRLTRKTVLERRVQGGRGPQLAAANVDTLFIVTSCNADFNIARLERYLAL 135 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-T 206 P+I+L K D +D A+ + + R + V+ ++ L Sbjct: 136 ANEAGTTPVILLTKADTAEDAE-AYRKQAAALQRELA--VVTLNPRIPGAASALAAWCGA 192 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKE--ILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 G+ G SGVGKS+L+N L G ++ T I ++ G+HTTTA L+ GG V Sbjct: 193 GQTVALIGSSGVGKSTLVNTLAGSAQQSPQQTGAIREHDAKGRHTTTARSLHAIAGGGWV 252 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 ID+PG+R + + I F E + LCK+RDC H +PGCA++ A++ G + Sbjct: 253 IDTPGMRTLQVSDVGY-GIDTLFAEITELAPLCKFRDCTHVHEPGCAVQAALKAGTLDPE 311 Query: 325 RFENYHRILESMAQV 339 R + ++ + Sbjct: 312 RLARWRKLSDENQHN 326 >UniRef50_C1CZT1 Putative GTPase engC protein 2 n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZT1_DEIDV Length = 330 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 24/331 (7%) Query: 25 SKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS-------LVTGD 77 ++ + + + + G + S + +A G + + T+R V GD Sbjct: 15 AEAAEPFLQDESVQAEPGRIASVGRASYQIWTAQG-LEDALLAGTLRQEAPGQQVPVIGD 73 Query: 78 RVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD-GVKPIAANIDQIVIVSAILPEL 136 V+ + A ++ V R + R + IAAN+D + IV+ + Sbjct: 74 WVIAQRLAEAQAL-----RIQQVLPRRTTFARAVHGGTAEQIIAANVDVVFIVTTPDQDF 128 Query: 137 SLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQD 196 L + RY+ A + EP+++LNK DL+ D A+ EQ+ +S+ Sbjct: 129 DLPRLGRYVAAVQVSGAEPVVLLNKSDLVQDA--AWYLEQVRRL-GPDLPAHQISAAQHG 185 Query: 197 GLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARL 255 GL ++ T R G SGVGKS+L N LLG + T + + G+HTTT L Sbjct: 186 GLDSIQPYFTPGRTVALIGSSGVGKSTLTNRLLGQEV-AATGSVRETDQQGRHTTTGRTL 244 Query: 256 YHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREA 315 Y P GG +ID+PG+R+ +W + + F + C++R C H T+PGCA++ A Sbjct: 245 YRVPGGGLLIDNPGLRDIAVWDADSRSVN--FEVIEELATKCRFRKCTHMTEPGCAVQRA 302 Query: 316 VEEGKIAETRFENYHRILESMAQVKTRKNFS 346 V++G++ YH E+ Q R Sbjct: 303 VQKGQLDAQVLAAYH---EAQGQPVRRPKKR 330 >UniRef50_A0L4L3 GTPase EngC n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4L3_MAGSM Length = 351 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 84/325 (25%), Positives = 137/325 (42%), Gaps = 29/325 (8%) Query: 28 KPDYDDNLFGEPDEG----IVISRFGMHADVESADGDVHRCNIRRTIR------SLVTGD 77 +P + L E VI+R G + DG + R + GD Sbjct: 14 RPFFQQQLSMEEQHATHVVRVIARHGDTLTLLGNDGQS-SLKLPGKWRLQPPEEQPIVGD 72 Query: 78 RVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPE 135 +V ER S L+R + +AANID + +VS+ + Sbjct: 73 WLVMDQQNQPLRW----------LERLSHLSRKAAGSGQQTQHMAANIDTLFVVSSCNRD 122 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 195 + + ++RYL ++P+++L K DL+D+ F + ++R G + + + Sbjct: 123 FNPSRLERYLALAFAGNVQPVVLLTKADLVDEPEP-FCRQVESLHR--GVVAIALDARHP 179 Query: 196 DGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAAR 254 D L + F G SGVGKS+L+NALL QK + T + G+HTTTA Sbjct: 180 DLHHQLGPWIGPGESVAFLGSSGVGKSTLINALL-DQKSMATQAARADDDRGRHTTTARA 238 Query: 255 LYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIRE 314 ++H G ++D+PG+RE L + + F + C+YRDC H+ GCA+ Sbjct: 239 MFHMKSGAWLLDTPGMRELRL-GESNQGLQTLFSDIEALAQACQYRDCDHERTSGCAVLA 297 Query: 315 AVEEGKIAETRFENYHRILESMAQV 339 AV + R NY ++ + Sbjct: 298 AVASDTLDARRVRNYLKLQREQTYL 322 >UniRef50_Q1K3F8 GTPase EngC n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3F8_DESAC Length = 317 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 99/336 (29%), Positives = 168/336 (50%), Gaps = 27/336 (8%) Query: 17 NHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTG 76 ++ ++KP +++ G++IS +G+ V +G+ H ++R V G Sbjct: 2 AQKKPTMRRQQKPQHNNG-----KPGLIISHYGVAVLVRFDNGEEHPVKVKRNSDH-VVG 55 Query: 77 DRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPEL 136 DRV+ + + ER + L R D + V+ +AAN+D + IV A+ P+ Sbjct: 56 DRVMVVDERVTS------------LERRNALRRRDPFGKVRTLAANLDLLGIVVAVRPQT 103 Query: 137 SLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQD 196 I+R +VA I P++++NK DL AF ++ + + L VS+ D Sbjct: 104 PSGFIERVVVAARAADIAPLLIVNKQDL--PGTTAFEDQLQRDFPAM--PRLAVSAKQGD 159 Query: 197 GLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARL 255 GL+ L L S G SG GKSSLLNAL ++ T D+++ G HTT+ + L Sbjct: 160 GLELLRHELAEAGRSALVGVSGSGKSSLLNALCPG-IDLETGDLNEEDH-GCHTTSVSTL 217 Query: 256 YHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL--CKYRDCKHDTDPGCAIR 313 P+GG+++D+PG R+F + E + F L C++R+C+H +PGC I+ Sbjct: 218 LALPNGGELVDTPGFRDFSPVDVSSEALAHWFPGVMSILEEQPCRFRNCRHRQEPGCRIK 277 Query: 314 EAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTD 349 +AV +G +E R++ Y LE + Q++T +N + Sbjct: 278 QAVTQGTFSEQRYQLYLNTLEELEQLETARNEGRKN 313 >UniRef50_C2HH17 GTP-binding protein n=2 Tax=Finegoldia magna RepID=C2HH17_PEPMA Length = 292 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 149/308 (48%), Gaps = 26/308 (8%) Query: 40 DEGIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKG 95 G++ V S +V+ + R+ V GD+V N G Sbjct: 4 KTGVITKIQRELFYV-SIGNEVYPSKAKGNFRNKKITPVVGDKVDINVE-------NGLG 55 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIE 154 + +H R+ +L RP+ +NID+ ++S+I P ++L ++D+YL+ E I+ Sbjct: 56 FILKIHPRSVLLHRPE--------VSNIDKCFVLSSIKSPNINLMLLDKYLLMIEKNNID 107 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 +IV NK DL+ ++ F DIYRNIGY+V+ S+ + + L IS G Sbjct: 108 CVIVFNKSDLVSEDEKKF---YADIYRNIGYKVIFNSNESSITNEELLNEFKNHISCVIG 164 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SG GKSS L L + + ++ ISD + G+ TT + V+D+PG F Sbjct: 165 PSGAGKSSTLKKLFPNE-DFVSGKISDKTQRGKQTTRHIEIKMVDDNTYVLDTPGFSSFD 223 Query: 275 LWHLE-PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 L L+ +I FVEF CK+ +C H +P C I+ VE G+I+++R++NY I+ Sbjct: 224 LSFLDDKSEIKNNFVEFRKNSSKCKFNNCDHINEPKCEIKRLVETGEISQSRYDNYLNIV 283 Query: 334 ESMAQVKT 341 E +++ Sbjct: 284 EEYEKIRR 291 >UniRef50_C6XMF8 GTPase EngC n=16 Tax=Alphaproteobacteria RepID=C6XMF8_HIRBI Length = 358 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 84/326 (25%), Positives = 147/326 (45%), Gaps = 21/326 (6%) Query: 28 KPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPA 87 E +I V D D + GD +++ P P Sbjct: 35 AQQVSAEEILETPPVRIIEIHRNSLHVLGEDIDTLIP----SGPDATVGDWLLYNPKLPN 90 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYL 145 + V ER SV R ++ IAAN+D IVS+ + ++ ++RY+ Sbjct: 91 SS---------KVLERKSVFQRRAAGTAWDLQLIAANVDTAFIVSSCNQDFNIARLERYI 141 Query: 146 VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL 205 ++ P+I+L KIDL +D ++ + I + V+ + + ++ + L + Sbjct: 142 ALALEAEVTPVIILTKIDLCEDA-TPYIEQAQSI--SDLVTVVTLDARGEEPQQKLAQWC 198 Query: 206 TGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDV 264 R +F G SGVGKS+L NAL G +I T + ++ G+HTTT +L+ P G + Sbjct: 199 RPRQTLVFLGSSGVGKSTLTNALAGKS-DIATQAVREDDDKGRHTTTTRQLHMSPQGFTI 257 Query: 265 IDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAET 324 +D+PG+RE L ++ F ++ + C++RDCKH+T+PGCAI+ A+E +I Sbjct: 258 LDTPGMREIQLTDAAA-GVSDLFSDYQEIAHQCRFRDCKHETEPGCAIQAALETEEIDSV 316 Query: 325 RFENYHRILESMAQVKTRKNFSDTDD 350 R + +++ + + D Sbjct: 317 RVARWKKLVAEEQFNSSTLAQRKSKD 342 >UniRef50_C7QYQ8 GTPase EngC n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYQ8_JONDD Length = 341 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 87/281 (30%), Positives = 127/281 (45%), Gaps = 23/281 (8%) Query: 74 VTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPIAANIDQIVIVSA 131 GD V +V R + L+R D + +AAN+D + +V Sbjct: 55 AVGDWVATDGSTW-----------VSVLPRRTELSRHSADRTSEEQVLAANVDAVFVVEP 103 Query: 132 ILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVS 191 P+ I+R L PI++L K DL+D + + V G V+ VS Sbjct: 104 AYPQPHHRRIERMLTLAWASGARPIVLLTKSDLVDHDVVTEVESVTR-----GVEVISVS 158 Query: 192 SHTQDGLKPLEEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTT 250 S T L L ++ I G SG GKSSL+NAL G + T ++ G G+HTT Sbjct: 159 SETGHHLDVLAGLISPGDTFILLGPSGAGKSSLVNALAGAPV-LATGEVR-GDGRGRHTT 216 Query: 251 TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGC 310 T L G +ID+PG+R G+ E + F + C++ DC H T+PGC Sbjct: 217 TRRELITIEGLGSLIDTPGLRSVGMTAQEA-GLEATFDDIASLAAQCRFSDCAHATEPGC 275 Query: 311 AIREAVEEGKIAETRFENYHRILESMAQVKTRKN-FSDTDD 350 A++ AV+E + R +NYHRI +A RKN +S D+ Sbjct: 276 AVQRAVDELALDPRRLDNYHRIEREIAHQARRKNAYSRVDE 316 >UniRef50_A4XCG5 GTPase EngC n=1 Tax=Salinispora tropica CNB-440 RepID=A4XCG5_SALTO Length = 350 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 18/331 (5%) Query: 15 NANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLV 74 + + +G G V+ G + + G H +R + +L Sbjct: 13 QSFPSLAALGWSHRWQAALAAYGAGCPGRVVRHDGSAVLISTEGGTRHF-PVRSSAPALA 71 Query: 75 TGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY-DGVKPIAANIDQIVIVSAIL 133 GD VV G V + R S+L R D G + IAAN+D + IV + Sbjct: 72 VGDWVVVD-----------DGRVLDLLPRASLLRRRDPSTGGGQLIAANVDVVGIVCGLD 120 Query: 134 PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSH 193 + + R+ P+++L+K DL++ A + + + ++ G ++ V++ Sbjct: 121 RPVVHGRLQRFTSLAWDAGASPLVILSKADLVN--STANIENSL-LQQHPGVDIVSVAAT 177 Query: 194 TQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAA 253 T G+ L R + G+SG GKS+LLNAL G + T + + G+HTTTA Sbjct: 178 TATGVFDLLGRCAKRTLVLVGESGAGKSTLLNALAGRELG-ATGKVRRSDAKGRHTTTAR 236 Query: 254 RLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIR 313 +L+ +ID+PG+RE G+ H + + GF + + C++ DC H +PGC + Sbjct: 237 QLFALEGDCCLIDTPGMREVGV-HADVATVDAGFDDIAELAVGCRFSDCGHANEPGCEVL 295 Query: 314 EAVEEGKIAETRFENYHRILESMAQVKTRKN 344 AV +G+++E R ++++ A + R + Sbjct: 296 AAVADGRLSEQRVRAWNQLCREAAWAELRAD 326 >UniRef50_D0J0X0 Ribosome small subunit-dependent GTPase A n=10 Tax=Betaproteobacteria RepID=D0J0X0_COMTE Length = 328 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 163/341 (47%), Gaps = 31/341 (9%) Query: 17 NHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTG 76 Q R ++ G+ G+V++ +G H VE+ DG+ C+ R V G Sbjct: 2 AKQGRRPGAQA--------TGDTQTGLVVASYGRHCVVETPDGERRICHPRGKKSQAVAG 53 Query: 77 DRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPEL 136 D V W P +G +E + ER +V R D K AAN+DQ++I+ A P Sbjct: 54 DHVQWLAPPPG---QGDEGTIEKIVERRNVFYRQD-DIRTKTFAANLDQLLILIAAEPVF 109 Query: 137 SLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI--------GYRVL 188 S + R L+A E I+PII LNK+DL + A+ ++++ YR + Y VL Sbjct: 110 SEVQLARALIAAEAAHIKPIIALNKMDLEEPFLRAW--QRLEPYRTMRDAANAAPHYMVL 167 Query: 189 MVS--SHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLG 246 +S + + L G+ ++ G SGVGKS+L+N LL ++ TN+IS G Sbjct: 168 PLSLEDADDEDRDAIIGLLEGKTTLVLGPSGVGKSTLINLLLP-DAKVATNEISQALNTG 226 Query: 247 QHTTTAARLYHFPHG--GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKH 304 +HTTT+ LY +IDSPG +EFGL+H+ Q+ + CK+ +C H Sbjct: 227 KHTTTSTTLYWVDEARTTAIIDSPGFQEFGLYHIAATQLAACMPDIGALADQCKFYNCTH 286 Query: 305 DTDPGCAIREAVEE----GKIAETRFENYHRILESMAQVKT 341 +PGCA+ VE I+ R+ Y + + ++Q Sbjct: 287 LHEPGCAVMAQVEAQDSPHSISANRYRIYGELFDELSQEPR 327 >UniRef50_A1AQR2 Ribosome small subunit-dependent GTPase A n=4 Tax=Deltaproteobacteria RepID=A1AQR2_PELPD Length = 330 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 21/318 (6%) Query: 31 YDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEG 90 + + G +++ G+ +V ++R V GD V Sbjct: 28 HSEIPSSPAGNGRIVAHHGISVEVLFQGEQRRMVRVKRNSGH-VVGDEVSVN-------- 78 Query: 91 VNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACET 150 G + R + L R D GV +AAN+D + IV A P IDR +V T Sbjct: 79 ----GELLTRLPRATELRRRDARGGVHLVAANLDALGIVMA--PLSPGRFIDRAIVTSRT 132 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRI 209 ++ P +V+NK DL + +A ++ + +S+ T +GL PL E L TGR Sbjct: 133 ARLTPFLVINKCDLGEAHQLAA---RLRETYAASLPLFPLSATTGEGLLPLREYLATGRC 189 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 +F G +GVGKSSL+NAL ++ + D +G+HTTT + L+ GG+++D+PG Sbjct: 190 GVFIGSTGVGKSSLMNALCP-HIKLAVGSVGDYRSMGRHTTTVSTLHSLDGGGELVDTPG 248 Query: 270 VREFGLWHLEPEQITQGFVEFHDY-LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 R+FGL + P+ + F F + C++ +C+H ++PGC++ ++++G+I R+ + Sbjct: 249 FRDFGLVDISPQDLAAHFPGFEEAGSESCRFSNCRHRSEPGCSVLRSLQQGRITRERYAS 308 Query: 329 YHRILESMAQVKTRKNFS 346 + +L+ + + +K Sbjct: 309 FLELLDEVEAEEEKKRVR 326 >UniRef50_A4SW79 Ribosome small subunit-dependent GTPase A n=2 Tax=Polynucleobacter necessarius RepID=A4SW79_POLSQ Length = 337 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 30/316 (9%) Query: 38 EPDEGIVISRFGMHADV----------ESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPA 87 E ++ + +G H ES G + + + GDR++ Sbjct: 2 EQFRALLTASYGRHYLAQRLIADAAGNESPSGPLIQVSTPAKQHIGAVGDRMLLEMTSV- 60 Query: 88 AEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVA 147 + + + R ++L R D + K IA+N+DQI+IV A P S +++ R +VA Sbjct: 61 -----DQARIIEIEPRENLLYRSDAFKS-KLIASNVDQILIVLATQPAFSPDLLGRAVVA 114 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSH-TQDGLKPLEEALT 206 ET QI I+LNK DL + + + + Y +GY V VS+ + L+ AL Sbjct: 115 AETNQIGLHILLNKCDL--PDNIEHARKIIAPYARMGYPVSEVSAKFDPASIDALQSALK 172 Query: 207 GRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG----- 261 G++S+F GQSG+GKSSLLNA + + T + S G+HTTTA R + P Sbjct: 173 GKVSVFVGQSGMGKSSLLNAWVPNAAAL-TQEYSVRLDTGKHTTTACRYFELPESWGRDA 231 Query: 262 ----GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVE 317 G +IDSPG +EFGL H+ ++ F EF D LG C++ +C H ++P CA+R AV+ Sbjct: 232 SGKLGALIDSPGFQEFGLAHMSVSELQHAFREFKDLLGKCRFHNCAHQSEPDCAVRAAVD 291 Query: 318 EGKIAETRFENYHRIL 333 +IA R + ++ Sbjct: 292 RNEIAPERLALFRQLR 307 >UniRef50_C0VZX3 Possible GTP-binding protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZX3_9ACTO Length = 351 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 111/367 (30%), Positives = 166/367 (45%), Gaps = 36/367 (9%) Query: 1 MSKNKLSKGQQR-RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADG 59 MSK + R RV R +K +PDY D EG + S V D Sbjct: 1 MSKRDIGTDDPRVRVRPGKGTR-PRTKIRPDYSDC-----PEGFIFSVDRGRYHVRFEDR 54 Query: 60 DVHRCNIRRTIR-SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR----PDFYD 114 + R R S+V GD V + + + +V+ER+SVL R D Sbjct: 55 LLMAVKSRELGRGSIVVGDVVKLNGDLSGRK--DTLARIVSVNERSSVLRRSGEDADTKG 112 Query: 115 GVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFV 173 K + AN D +VIV+A+ P + IDR LVA + PI+ L K DL D + Sbjct: 113 REKTMVANADNVVIVTAMTNPPVRPGFIDRCLVAAYDAHMRPIVCLTKADLGDPD----- 167 Query: 174 NEQMDIYRNIGYRVLMVSSHTQD----GLKPLEEALTGRISIFAGQSGVGKSSLLNALLG 229 + + ++G ++ S+ G + L E ++G+ S+ G SGVGKS+L+NA+L Sbjct: 168 -NVISLCESLGVTTVISSNQEGHEHQFGYEKLIELISGQTSVLIGHSGVGKSTLINAILP 226 Query: 230 LQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVE 289 + + T D++ +G G+HT+T P GG +ID+PG+R FGL H+EP+ + F E Sbjct: 227 EAERL-TGDVNQVTGRGRHTSTNMIALELPEGGWIIDTPGIRGFGLAHVEPDTVIDAFPE 285 Query: 290 FHDYLGLCKYRDCKHDTD-PGCAIREAVEEGK------IAETRFENYHRILESMA--QVK 340 D + C R C H C + V+ G R + R+LES+ Q K Sbjct: 286 LEDAIEDCP-RSCNHLESAVDCGLDAWVKAGADEADAVYRANRLASIRRLLESLKTAQEK 344 Query: 341 TRKNFSD 347 + D Sbjct: 345 PWETVRD 351 >UniRef50_Q8R685 Putative ribosome biogenesis GTPase rsgA n=15 Tax=Fusobacterium RepID=RSGA_FUSNN Length = 285 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 87/298 (29%), Positives = 152/298 (51%), Gaps = 29/298 (9%) Query: 45 ISRFGMHADVESADGDVHRCNIRRTIRS------LVTGDRVVWRPGKPAAEGVNVKGIVE 98 I++ VES +G V C +R ++ V GDRV + Sbjct: 2 INKIQGFYYVES-NGQVFECKLRGILKKTNNKYNCVVGDRVEISEDNS----------IV 50 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVI-VSAILPELSLNIIDRYLVACETLQIEPII 157 + +R ++L RP I AN+D + I +A P + I+ L+ +I+PI+ Sbjct: 51 EIFKRDNLLIRP--------IVANVDYLAIQFAAKHPNIDFERINLLLLTAFYYKIKPIV 102 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSG 217 ++NKID L +E + + E++ I + ++S + GL+ +E L +I++ G SG Sbjct: 103 IVNKIDYLTEEELVELKEKLSFLERISVPMFLISCYQNIGLEEVENFLKDKITVIGGPSG 162 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 VGKSS +N L ++ + T +IS+ G+HTT + + GG +ID+PG + + Sbjct: 163 VGKSSFIN-FLQSERILKTGEISERLQRGKHTTRDSNMIKMKAGGYIIDTPGFSSIEVPN 221 Query: 278 LE-PEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 +E E++ F EF + + CK+ +C H +PGC +++ VEE KI++ R++ Y + LE Sbjct: 222 IENREELISLFPEFLN-IDSCKFLNCSHIHEPGCNVKKQVEENKISKERYDFYKKTLE 278 >UniRef50_C4DFS4 Predicted GTPase n=2 Tax=Actinomycetales RepID=C4DFS4_9ACTO Length = 363 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 92/317 (29%), Positives = 139/317 (43%), Gaps = 29/317 (9%) Query: 41 EGIVISRFGMHADVESADGDVHR--------CNIRRTIRSLVTGDRVVWRPGKPAAEGVN 92 G V V +A G V + + GD VV R + Sbjct: 28 PGRVARVDRGVCTVLTAGGTVRASLAGRMLGVVAKDPLSMPSVGDWVVVR------TWDD 81 Query: 93 VKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACET 150 + +EAV R S + R + IAAN D + IV A+ P+ I+R Sbjct: 82 DRRTIEAVLPRRSAIVRSTAGKAAEGQAIAANADAVAIVEALDPDPDFGRIERLAALAYD 141 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210 P++VL K D + D + ++ + VL VS+ T GL L E L S Sbjct: 142 SGATPLLVLTKADAVPDPEL-LADDLSAAMPDA--PVLTVSAVTGQGLDALAEYLKPGRS 198 Query: 211 -IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 G SG GKS+L+NAL G + + T + G G+HTT+ L PHGG +ID+PG Sbjct: 199 LALLGASGAGKSTLVNALAGAEV-MATRGLRA-DGRGRHTTSHRSLVPVPHGGAIIDTPG 256 Query: 270 VREFGLWHLEP-------EQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIA 322 +R GL+ P + + + F + C++ DC+HDT+PGCA+ A+++G + Sbjct: 257 LRVVGLFDRRPGDAATPVDGLARAFGDLDALAAQCRFNDCRHDTEPGCAVLAAIDDGLLT 316 Query: 323 ETRFENYHRILESMAQV 339 R EN+ ++ A Sbjct: 317 ARRLENWRKLQREQAFE 333 >UniRef50_D0LXL5 GTPase EngC n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LXL5_HALO1 Length = 361 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 89/301 (29%), Positives = 132/301 (43%), Gaps = 23/301 (7%) Query: 34 NLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSL-------VTGDRVVWRPGKP 86 + V + G E A + +R TGD V Sbjct: 24 DGAERWVPARVSADSGDIY--ELAGCRARFGQLAGRLRHPDHASARPTTGDWVAVSDD-- 79 Query: 87 AAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRY 144 + + + +R S L R + +AAN+D +V+A +L+ ++RY Sbjct: 80 -----DDNARIHLLLDRRSALVRRAAGKATHAQVVAANVDVFFLVTAADRDLNPRRLERY 134 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA 204 L A +P+IV+NKIDL+D++ A +++ V VS+ G+ L Sbjct: 135 LAAVWDSGAQPVIVVNKIDLVDEDEAARALHRVEAIAGAA-SVAGVSAMAGSGVDALAPF 193 Query: 205 L-TGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD 263 L G G SGVGKS+L N LLG + + G G+HTTT L P GG Sbjct: 194 LGVGATVGLIGSSGVGKSTLSNRLLGDEMQAAAAT--RGDGKGRHTTTRRELRVLPGGGV 251 Query: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323 +ID+PG+REFG+ E F E + C++RDC HD +PGCA+ AV EG++ E Sbjct: 252 LIDTPGMREFGMLGGEGGLEV-AFAELAEVAARCRFRDCTHDDEPGCAVLAAVAEGELGE 310 Query: 324 T 324 Sbjct: 311 E 311 >UniRef50_Q114R1 Ribosome small subunit-dependent GTPase A n=2 Tax=Oscillatoriales RepID=Q114R1_TRIEI Length = 374 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 84/333 (25%), Positives = 137/333 (41%), Gaps = 52/333 (15%) Query: 42 GIVISRFGMHADVESADG------------DVHRCNIRRTIRS----LVTGDRVVWRPGK 85 G V++ V+ C R ++ ++ GDRV+ Sbjct: 17 GTVVAVQANFYQVKIERSYNSVKNARENLPQFLLCTRRSRLKKIGQKVMVGDRVIIE--- 73 Query: 86 PAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRY 144 + V +G + V R + L RP AN++Q+++V A+ P L + R+ Sbjct: 74 -DPDWVGGRGAIAEVLPRETELDRP--------PIANVNQVMLVFALAEPNLDPVALTRF 124 Query: 145 LVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGL------ 198 L+ E+ +E + L+K DL+ M Q+ GY +S T GL Sbjct: 125 LLKAESTGLEICLCLSKCDLVSATKMEEWRSQISE---WGYEPFFISLKTDVGLGVVKDG 181 Query: 199 -KPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 L E L +I++ +G SGVGKSSL+N L+ + + +S G+HTT L+ Sbjct: 182 SNSLWEKLRNKITVVSGPSGVGKSSLINYLIP-DVNLRVSAVSGKLSRGRHTTRHVELFE 240 Query: 258 FPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL--CKYRDCKHDTDPGCAIREA 315 P+GG + D+PG + L E ++ F E YL C++ DC H +P C +R Sbjct: 241 LPNGGLLADTPGFNQPQL-ECEAIELAHLFPEARKYLADGSCQFSDCLHRDEPNCVVRGE 299 Query: 316 VEEGKIAETRFENYHRILESMAQVKTRKNFSDT 348 R+E Y LE + ++ Sbjct: 300 W-------NRYEYYLMFLEEA--IARQEALQQK 323 >UniRef50_D2MQI0 Ribosome small subunit-dependent GTPase A n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI0_9FIRM Length = 289 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 27/307 (8%) Query: 41 EGIVISRFGMHADVESAD-GDVHRCNIRRTIR---SLVTGDRVVWRPGKPAAEGVNVKGI 96 + +I V D + + +R S V GD V + + Sbjct: 2 KAKIIKIVSKDYGVFLEDTKEKVMARVAGKVRLQFSPVVGDMVEVSYQTD-------RYV 54 Query: 97 VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEP 155 ++ + R + L RP AN+DQ IV ++ P S +++DR + + I+P Sbjct: 55 IDRILPRRNSLVRPA--------IANVDQAFIVMSVVDPNFSTSLVDRLSILVKAAGIKP 106 Query: 156 IIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ 215 I+V+ K DL + V +++ Y ++L++ + ++ +L G+I++ GQ Sbjct: 107 ILVITKTDLKYPDD---VETEIEAYERG--KMLVIRTEKGFINPAIQHSLEGKITVLTGQ 161 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SG GKS+LLN L + T +IS G G+HTT + L+ GG V D+PG Sbjct: 162 SGAGKSTLLNTLDPS-FHLETQEISKALGRGKHTTRHSELHEI-AGGLVADTPGFSSLSF 219 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 HLE + + +F YL C++ DC H+ +P C I++AV +G IA++R+++Y ++L Sbjct: 220 SHLELKDMADCIPDFEPYLHQCRFNDCLHENEPDCTIKKAVLKGDIAKSRYQSYLQVLAL 279 Query: 336 MAQVKTR 342 + + R Sbjct: 280 IREENRR 286 >UniRef50_B3PN77 GTPase YjeQ/EngC n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PN77_MYCA5 Length = 279 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 146/306 (47%), Gaps = 37/306 (12%) Query: 39 PDEGIVISRFGMHADVES-ADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNV 93 D+G ++ DV+S +D ++R +R + GD V + + Sbjct: 1 MDKGKIVKSIAGFYDVKSFSDSKIYRVRGSGKLRLLDMKPIVGDFVEFEHNE-------- 52 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 ++ + R + RP AN+DQ ++V ++ P+ S ++D++L+ E Sbjct: 53 --LIHRIMGRKNFFIRPK--------IANVDQAIVVMSLVEPDFSSQLVDKFLIIIENKN 102 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 + PIIVL K DL ++D Y++ GY V ++ T++G L E + S F Sbjct: 103 VTPIIVLTKKDLTS-------KTKIDFYKDQGYTVYEINYETEEGFDDLREIFRNKTSFF 155 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 GQ+GVGK++L+N L T IS G+HTT L F +GG++ID+PG Sbjct: 156 VGQTGVGKTTLINYLAKT--SFETQAISKALNRGKHTTREVSLIDF-NGGEIIDTPGFSS 212 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKH--DTDPGCAIREAVEEGKIAETRFENYH 330 L +++ F F + +CKYR C+H + + C +++ V +G I + R++NY Sbjct: 213 IEF-DLTIDEMPVAFKTFREAAKMCKYRSCRHYQEAESECNVKQLVLKGIIKQERYDNYR 271 Query: 331 RILESM 336 LE + Sbjct: 272 SFLERL 277 >UniRef50_B8HA01 GTPase EngC n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HA01_ARTCA Length = 340 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 93/329 (28%), Positives = 151/329 (45%), Gaps = 25/329 (7%) Query: 29 PDYDDNLFGEPDE--GIVISRFGMHADVESADGD---VHRCNIRRTIRS-LVTGDRVVWR 82 PD +++ + + V+ G HA+V SA G T+ + V GD V Sbjct: 14 PDDEESFLEQTEAQIARVVIVHGGHAEVMSASGTENVTETVLFSSTLDTTPVAGDWVAV- 72 Query: 83 PGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD-GVKPIAANIDQIVIVSAILPELSLNII 141 ++G + V R + + RPD + +AANID I++V A P SLN I Sbjct: 73 ----------LQGTIVEVAPRRTSMARPDPGGNRTQVLAANIDLILVVVAADPIPSLNAI 122 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPL 201 +R V P++VL K D D + V E + + G ++ S GL L Sbjct: 123 ERMQVMAWDSGATPVLVLTKADQCSD--LDEVLEHVAPVSS-GLETIVTSITDGRGLSLL 179 Query: 202 EEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG 261 + + + G SG GK+SLLNAL G T + G G+HTTT RL+ P G Sbjct: 180 HDRVENLTTTMLGASGAGKTSLLNALHGTDA--ATAPVR-RDGQGRHTTTTRRLFPMPWG 236 Query: 262 GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI 321 G ++D PG+R L E I+ F + + C++ DC H+ GCA+ AV +G++ Sbjct: 237 GVMLDIPGIRSLAL-QAGQEGISDTFADISELSYHCRFSDCLHERTAGCAVAAAVADGRL 295 Query: 322 AETRFENYHRILESMAQVKTRKNFSDTDD 350 + R +++ + ++ + R++ + + Sbjct: 296 SARRLDSWLAVQRELSFQERRRDPAAMAE 324 >UniRef50_C7MLK1 Predicted GTPase n=4 Tax=Coriobacteriaceae RepID=C7MLK1_CRYCD Length = 355 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 88/316 (27%), Positives = 140/316 (44%), Gaps = 17/316 (5%) Query: 41 EGIVISRFGMHADVESADGDVHRCN-----IRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 + V+ V A GD+ RC ++ + V GD V A K Sbjct: 4 KAQVVQLDRGFPLVRLASGDLIRCKHATSLVKEATQRAVIGDWVKIETDDAAD-----KA 58 Query: 96 IVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQI 153 + + R VL R D + V+ +AAN D ++I + P L++ ++R LV Sbjct: 59 QIVEILPRQQVLLRKDPAERSMVQVLAANFDTVIIAHPL-PGLNIRRLERELVVACDTGA 117 Query: 154 EPIIVLNKIDLLD-DEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI-SI 211 ++ L K DL++ D+ + G V+ VS+ Q G+ + ++ ++ Sbjct: 118 RVVVALTKSDLVESDQVRTDAVAAVQAVVAPGIGVIEVSTVNQIGIDAVRALVSTGTQAV 177 Query: 212 FAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 G+SG GKSSL+NAL + + T + G G+HTT + GG+VID PGVR Sbjct: 178 LMGRSGAGKSSLINALADQEVQ-ATQPVRAADGKGRHTTVNRTMVRIQGGGEVIDMPGVR 236 Query: 272 EFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHR 331 GLW + I F + + C++RDC+H D GC + A++ G I R Y R Sbjct: 237 GLGLWDAQA-GIDAAFPDVVEAARNCRFRDCRHQGDAGCGVGAAIKAGNITPERVAAYVR 295 Query: 332 ILESMAQVKTRKNFSD 347 + E +Q R + Sbjct: 296 LSEENSQQLKRNKEAQ 311 >UniRef50_Q7VEJ4 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Prochlorococcus marinus RepID=RSGA_PROMA Length = 309 Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 47/327 (14%) Query: 38 EPDEGIVISRFGMHADVESADGDVH-------------------RCNIRRTIRSLVTGDR 78 + +GIV++ + V+ ++ R + S+ GD Sbjct: 7 DRIKGIVLALKANYYIVQIDTINLIPELFKKKIGDHNFRLLCTKRSRLSYKGHSVSVGDF 66 Query: 79 VVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANI-DQIVIVSAILPELS 137 V+ A + G++ V R +++TRP AN+ D I++VS + P Sbjct: 67 VLIE----AIDWTAETGVISFVEPRKNLITRP--------PVANVTDVIIVVSLLDPSFD 114 Query: 138 LNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDG 197 LN + R+L+ E ++ IVL K DL+D++ + ++++ + GY+ + +S +G Sbjct: 115 LNQVSRFLMKAEETGLKVTIVLTKRDLIDEKILEKYDKKL---QTWGYQPIPISIVNGEG 171 Query: 198 LKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLY 256 ++ L L ++ + G SGVGKSSL+N LL I +S G+HTT L+ Sbjct: 172 IQKLSARLKSMKLGVLCGPSGVGKSSLINYLLPK-ISIPIGKLSKKLKRGRHTTRHVELF 230 Query: 257 HFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD--YLGLCKYRDCKHDTDPGCAIRE 314 + D+PG + + EP Q+ Q F E + CK+R+C H +P CAI Sbjct: 231 SIYSDSFIADTPGFNKPEFYT-EPSQVPQLFPELRSQLLIKKCKFRNCMHLNEPDCAISR 289 Query: 315 AVEEGKIAETRFENYHRILESMAQVKT 341 E R+ NY L+ M Sbjct: 290 DWE-------RYSNYKNFLQEMLNYHH 309 >UniRef50_A6W235 GTPase EngC n=2 Tax=cellular organisms RepID=A6W235_MARMS Length = 382 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 88/284 (30%), Positives = 135/284 (47%), Gaps = 31/284 (10%) Query: 75 TGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILP 134 GD V+ P V+ + V E + L R + IAAN+D + IV++ Sbjct: 74 VGDWVIAEP-------VHEHFRITEVLEAKNQLERLSNRKR-QLIAANLDYLFIVTSANS 125 Query: 135 ELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYR-VLMVSSH 193 + +L ++RYL IEP+IVLNKIDL D V++ +D R + ++ +S Sbjct: 126 DFNLKRLERYLAMAYESNIEPVIVLNKIDLTDK-----VDDYLDQIRGLKVHNLVSISML 180 Query: 194 TQDGLKPLEEALTGRISI-FAGQSGVGKSSLLNALLGL---------------QKEILTN 237 + L L L +I G SGVGKSSL+NAL T Sbjct: 181 EPNSLLSLNHYLKAGTTIAMVGSSGVGKSSLINALFNHVVELATSVLNSVEVTDNMQATG 240 Query: 238 DISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLC 297 I ++ G+HTTT+ +L G ID+PG+RE L + + E I Q F + C Sbjct: 241 GIREDDDKGKHTTTSRQLLINQQGVLFIDTPGIRELQLLNAQ-EGIEQTFNDIVHLARQC 299 Query: 298 KYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKT 341 K+ +C H T+PGC I +A+E G++ + ++NY ++L+ A Sbjct: 300 KFTNCAHQTEPGCQILQALENGELPLSHWDNYQKLLKEDAFNAR 343 >UniRef50_B2A2K9 Ribosome small subunit-dependent GTPase A n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2K9_NATTJ Length = 288 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 28/307 (9%) Query: 41 EGIVISRFGMHADVESADGD-VHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKG 95 +G V+ V+ + + C ++ + + GD V+ +G Sbjct: 2 QGRVVKIINDFYYVQGNEKNATIECKLKGNLIKDNNFPLVGDVVLVELTGEG------QG 55 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 ++ + R + L +P AN+DQ+++V+++ P+ +L ++DR LV ++ Sbjct: 56 MISDLSSRENRLVKPA--------VANVDQVIVVTSVKNPKPNLQLVDRLLVWAYFEGLQ 107 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 ++ +NK +L E +IY+ ++S D L L + + S+ AG Sbjct: 108 GMVCINKREL----DYQKAQELAEIYKTSEINTTLISVKEND-LDHLPKFFENKTSVLAG 162 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 QSGVGKSS+LN L + N +S +G G+HTT +L GG ++D+PG + Sbjct: 163 QSGVGKSSILNTL-NPDLNLEVNPVSRKAGTGKHTTRHCQLLK-AGGGFLVDTPGFNKKK 220 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L + PEQ+ F E + CK+ DC H +P C +++ V I TR+E++ + E Sbjct: 221 LPEIVPEQLELAFPEIKKHSSDCKFNDCSHRKEPDCQVKKLVGT-DIPTTRYEHFVKFFE 279 Query: 335 SMAQVKT 341 + ++ Sbjct: 280 ELVDMER 286 >UniRef50_Q28KH3 GTPase EngC n=5 Tax=Rhodobacteraceae RepID=Q28KH3_JANSC Length = 347 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 81/322 (25%), Positives = 140/322 (43%), Gaps = 21/322 (6%) Query: 34 NLFGEPDEGIVISRFGMHADVESADGDVHRCN-IRRTIRSLVTGDRVVWRPGKPAAEGVN 92 + V SADG + + VTGD V+ Sbjct: 21 DQDAAATPARVNKVSRTRITALSADGPLRLVTQGDESTGEYVTGDWVLAD---------A 71 Query: 93 VKGIVEAVHERTSVLTRPDFYD--GVKPIAANIDQIVIVSAILPELSLNIIDRYLVACET 150 +G+V ER ++LTR + IAAN+D + IV++ + ++ ++RYL + Sbjct: 72 AEGLVLRRLERDTLLTRRAAGTGLEAQLIAANVDTLGIVTSCNADFNVARLERYLAMAAS 131 Query: 151 LQIEPIIVLNKIDLLDDE-GMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEA-LTGR 208 P+I+L K D+ DD E + + + +++ + L+ TG+ Sbjct: 132 AGCLPLIILTKADMADDPRDYERRAEALSPLAS----AIAMNAKADNAADMLKPWSKTGQ 187 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 G SGVGK++L NAL G ++ T I ++ G+HTTT+ L GG +ID+P Sbjct: 188 TFALVGSSGVGKTTLANALTGAEE--ATAGIREDDAKGRHTTTSRGLARTIFGGWLIDTP 245 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFEN 328 G+R L + I F + CK+RDC H ++PGCA++ A+ +G + E R Sbjct: 246 GMRALRLNDAS-DGIGAVFADIEALTEACKFRDCAHLSEPGCAVQAAIADGTLDEDRLRR 304 Query: 329 YHRILESMAQVKTRKNFSDTDD 350 + +++ + + + Sbjct: 305 FQKLVREDEMNQEATHERRARE 326 >UniRef50_D2NNY6 Predicted GTPase n=2 Tax=Rothia mucilaginosa RepID=D2NNY6_9MICC Length = 440 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 89/347 (25%), Positives = 150/347 (43%), Gaps = 42/347 (12%) Query: 42 GIVISRFGMHADVE-SADGDVHR--CNIR------RTIRSLVTGDRVVWR-PGKPAAEGV 91 V + ++ G++ + +R V GD V+ + Sbjct: 74 ARVSAVHRTRCELLICDRGELIKLSAPLRPVENDYGEEEYPVVGDWVLTQLIPGSGGAAH 133 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAILPELSLNIIDRYLVACE 149 + A+ R S LTRP +P+AAN+D + IV PE S+ I+RY Sbjct: 134 PAEHKFLAILPRRSYLTRPSATRESADQPVAANVDMLCIVEPCFPEPSIGRIERYTALAH 193 Query: 150 TLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRI 209 ++ ++L K DL+ E +A E + + VL V + P+ + + GR Sbjct: 194 ASGVQVALILTKGDLVTAEQLASYRESLGGSVD---TVLTVCTDNGYDPAPVAKLVAGRT 250 Query: 210 SIFAGQSGVGKSSLLNALLGL----------QKEILTNDISDNSGLGQHTTTAARLYHFP 259 + F G+SG GKS+L+NALL + +T+ + D G G+HTTT+ ++ P Sbjct: 251 AAFLGRSGAGKSTLVNALLNPGVDPREDSQEHQVQVTSTVRDADGKGRHTTTSRQMLVLP 310 Query: 260 H----------------GGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCK 303 G +ID+PGVR + I + F + Y C+Y DC Sbjct: 311 GAEGSSEGDSTNAKSSSGTVLIDTPGVRALAAT-SDSTAIDETFDDVSGYASACRYSDCS 369 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 H ++PGCA+++A+ +G + RFE Y R++ A+++ R + Sbjct: 370 HGSEPGCAVQQAITDGSLDPERFERYRRMIAESARLRLRSQEREYRQ 416 >UniRef50_B5W2A4 GTPase EngC n=2 Tax=Arthrospira RepID=B5W2A4_SPIMA Length = 406 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 142/373 (38%), Gaps = 92/373 (24%) Query: 35 LFGEPDEGIVISRFGMHADV-----ESADGD-------------VHRCNIRRTIRSLVTG 76 + + G V++ V +S G+ R +++ + ++ G Sbjct: 1 MTADRIMGTVVAGQANFYQVCLSPDQSPSGNGAGGEAKRMTLLCTCRARLKKIGQKVMVG 60 Query: 77 DRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPE 135 DRVV + +G++ + R + L RP AN D +++V A+ P+ Sbjct: 61 DRVVV----SCPDWQGGRGVISEILPRKTELARPS--------IANADHLLLVFAVAEPD 108 Query: 136 LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 195 + R+L+ E+ +E + NK DLL + + + D R GY LM+S + Sbjct: 109 PDPVTLSRFLLKAESTGLEVSLCFNKCDLLPPDSL---RQWYDRMRGWGYDPLMISVYHG 165 Query: 196 ----------------------DGLKP-------------------------LEEALTGR 208 GL L + L + Sbjct: 166 VEYRFEGDRMETSPTLNLSSNSAGLDKPGFGESSPSLTRDGDRNQVSGTANSLLDRLRLK 225 Query: 209 ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSP 268 + +G SGVGKSSL+N L+ + ++S G G+HTT L+ +GG + D+P Sbjct: 226 TTAISGPSGVGKSSLINKLIP-NSHLRVGEVSGKLGRGRHTTRHVELFELHNGGFLADTP 284 Query: 269 GVREFGLWHLEPEQITQGFVEFHDYL--GLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 G + L +P Q+ F E D L G C++ DC H +P C +R E R+ Sbjct: 285 GFNQPELQC-DPHQLGNYFPEIRDRLTKGKCQFDDCLHREEPSCVVRGDWE-------RY 336 Query: 327 ENYHRILESMAQV 339 Y LE + Sbjct: 337 PQYLHFLEEAIEA 349 >UniRef50_A6GEY2 Probable GTPase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GEY2_9DELT Length = 374 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 29/330 (8%) Query: 41 EGIVISRFGMHADVE-SADG------DVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNV 93 V+ V +G VH R+ GD + R E + Sbjct: 21 PARVVRVDAQGCTVLAVPNGGEAVELHVHVPKRLARKRAPAVGDWAIVRTKGKGGE-RDG 79 Query: 94 KGIVEAVHERTSVLTRPDFY--DGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETL 151 +V + ER + LTR + +AAN+D++++ S++ + L ++R+L Sbjct: 80 DFVVRKLLERATSLTRRAAGSSGRAQVLAANLDRVLVCSSLDRDFKLTRLERWLSLVHEG 139 Query: 152 QIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG---- 207 EP++VL K L+D+ A E +G V+ V T GL L+ + Sbjct: 140 GAEPVVVLTKAGLVDEATRARRVEAAREV-ALGVSVIAVDRFTGVGLDALDACVLRAVEE 198 Query: 208 ------RISIFAGQSGVGKSSLLNAL---LGLQKEILTNDISDNSGLGQHTTTAARLYHF 258 G SGVGKS+LLN L G + + T IS G G+HTT+ L Sbjct: 199 DASSWAPTLALVGSSGVGKSTLLNYLCELAGGEGAMATGSISSAHGKGRHTTSHRELVAL 258 Query: 259 PHG----GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIRE 314 P +ID+PG+RE GLW E E + + F E C++ DC+H +PGCA+R Sbjct: 259 PERDGLRALLIDTPGLREVGLWG-EGEGVDKTFAEIGALARGCRFGDCQHAGEPGCAVRA 317 Query: 315 AVEEGKIAETRFENYHRILESMAQVKTRKN 344 AV+EG++ R E Y R+++ R N Sbjct: 318 AVDEGRLEGRRLEAYRRLVDERETTARRAN 347 >UniRef50_A8SM04 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SM04_9FIRM Length = 302 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 30/310 (9%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIV 97 G++ V++ G + R R + GD V + + Sbjct: 16 GVIFDISKDLYYVKTKTGR-YMSKARGVFRKQKFTPMVGDNVKIEI------FADNTACI 68 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPI 156 V +R + + RP N+DQ +IV ++ PE+S IIDRY++ E ++I I Sbjct: 69 VEVFDRKNKILRP--------PVVNVDQAIIVFSLKDPEISYKIIDRYIMYYEVMKIPII 120 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 + LNK DL+D E +IY +GY+++ +S + D K E+ +IS+ G S Sbjct: 121 LCLNKCDLIDKETEI---NFRNIYDKLGYKIIF-NSISLDNRKLFEDICKDKISVITGAS 176 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKS++LN L I DIS+ + G+HTT AA LY F +ID+ G L Sbjct: 177 GVGKSTILN-FLNPDYNIWVGDISNKTKRGKHTTRAATLYEFFDNSFIIDTAGFTSLDLT 235 Query: 277 H-LEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 ++ E QI FVEF + CK+ DCKH +P C ++ +E G I+++R+++Y L Sbjct: 236 KFIDSEVQIRDAFVEFE-FGSKCKFSDCKHINEPDCYVKSKLESGSISKSRYDSYIFYLN 294 Query: 335 SMAQVKTRKN 344 +K R+ Sbjct: 295 E--YLKNRRY 302 >UniRef50_D1J8S7 Probable GTPase engC n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8S7_MYCHP Length = 283 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 38/309 (12%) Query: 39 PDEGIVISRFGMHADVES-ADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNV 93 EG ++ D++S D ++R +R + GD V+++ + Sbjct: 1 MIEGKIVKSVAGFYDIKSFEDKQIYRVRGGGKLRLLDIVPIVGDNVLFKKDE-------- 52 Query: 94 KGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQ 152 + + R + RP AN+DQ ++V ++ PE S ++D++L+ E+ Sbjct: 53 --FIYQILGRKNFFIRPK--------IANVDQAIVVMSLVEPEFSSLLVDKFLIIIESKN 102 Query: 153 IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 ++PIIVL K DL D ++ Y++ GY V ++ T G + L E + S F Sbjct: 103 VKPIIVLTKKDLTSDS-------KIAFYKDQGYEVFEINYETGQGFEGLGEIFKHKTSFF 155 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 GQ+GVGK++L+N L T IS G+HTT L F +GG++ID+PG Sbjct: 156 VGQTGVGKTTLINYLAKTN--FETQAISKALNRGKHTTREVSLIDF-NGGEIIDTPGFSS 212 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYR-DCKHDTDP--GCAIREAVEEGKIAETRFENY 329 L E++ F F + CK+R CKH + C +++ V +GKI + R++NY Sbjct: 213 IEF-DLTIEELPIAFKSFREAASKCKFRTSCKHYLESVEDCEVKKLVLQGKIKQERYDNY 271 Query: 330 HRILESMAQ 338 L+ + Sbjct: 272 ISFLKRLTN 280 >UniRef50_B9ZJR5 Ribosome small subunit-dependent GTPase A n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJR5_9GAMM Length = 281 Score = 244 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 97/287 (33%), Positives = 142/287 (49%), Gaps = 17/287 (5%) Query: 57 ADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV 116 D + R + R + L GDRV ++ R + L R D + Sbjct: 8 EDAEPRRIRLHRRQKDLACGDRVEMDAAGEQ---------IQRRLPRDNTLVRQDGFGRR 58 Query: 117 KPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQ 176 K IAANID + IV A P + +IDR+LVA L P I++NK D G A ++ Sbjct: 59 KVIAANIDTVWIVIAPSPMPARYLIDRFLVAVYNLPARPRILVNKQD----AGPAAPSDW 114 Query: 177 MDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ----K 232 + Y ++ L VS+ + GL L EA G +I GQSGVGKSSL+ ALL Sbjct: 115 LAPYAHLDLDPLHVSARSGYGLDALAEAARGHTNILIGQSGVGKSSLIAALLERHGSGDI 174 Query: 233 EILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHD 292 ++ SG G+HTT A+ Y GG IDSPGVR+F + + +GF + Sbjct: 175 KLPETGDLAASGEGRHTTVTAQWYSLTGGGAWIDSPGVRDFTPELESIDALVRGFPDIEA 234 Query: 293 YLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 C++R+C+H T+PGCA+RE V++G + R E + +L ++ + Sbjct: 235 LGEGCRFRNCRHQTEPGCAVREGVDQGTLPAARLEAWTALLGTLEKR 281 >UniRef50_B4UM25 Ribosome small subunit-dependent GTPase A n=4 Tax=Anaeromyxobacter RepID=B4UM25_ANASK Length = 350 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 142/318 (44%), Gaps = 20/318 (6%) Query: 29 PDYDDNLFGEPDEGIVISRFGMHADVESADGD---VHRCNIRRTIRSLVTGDRVVWRPGK 85 G V++ G V GD + ++ + V GD V+ PG+ Sbjct: 15 AQLSSEEASTLLVGRVVADRGRRLRVRFEAGDRLAIVPGHLLGADPAPVAGDFVLAAPGE 74 Query: 86 PAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANIDQIVIVSAILPELSLNIIDR 143 P ++ V ER S L+R + +AAN+D +++V + ++R Sbjct: 75 PP--------VIARVLERRSALSRNAAGRATVEQVLAANVDVVLVVQGLDEGAHPRRLER 126 Query: 144 YLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEE 203 L A EP +VL K DL+ D G A + VL+ S + +GL L Sbjct: 127 TLAAVHASGAEPAVVLTKADLVPDLGEALAEARSAAAGA---PVLVASGLSGEGLDALAG 183 Query: 204 ALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGG 262 + R ++F G SG GKS+L+NALLG E + G+HTTTA RL+ P GG Sbjct: 184 LVGPGRTAVFVGPSGAGKSTLVNALLGR-AEQPVGAVRARDARGRHTTTARRLFEIPGGG 242 Query: 263 DVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIA 322 VID PG+RE LW + + F + C++RDC H +PGCA+ AVE G + Sbjct: 243 SVIDGPGIRELRLW--DAGGLAAAFDDVAALAAGCRFRDCSHAGEPGCAVAAAVEAGGLD 300 Query: 323 ETRFENYHRILESMAQVK 340 R E+ ++ A + Sbjct: 301 AGRLESLRKLEREAALQE 318 >UniRef50_Q7NDG7 Glr4268 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NDG7_GLOVI Length = 343 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 100/314 (31%), Positives = 142/314 (45%), Gaps = 33/314 (10%) Query: 41 EGIVISRFGMHADVESADGD-----VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 G V+++ V DG R +++T +S++ GDRV + + +G Sbjct: 4 TGTVLAQEANFYRVRLDDGLGMVLCTRRARLKKTGQSVLVGDRVEV----AEIDSASGRG 59 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 ++ A R SVL+ KP AN +++V A+ P ++ R+LV E + Sbjct: 60 VIAATCARRSVLS--------KPPIANCTGVLVVFALSEPAYDPALLSRFLVHIEAEDLG 111 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 I+ LNKID + E V+ GY V VS+ T GL L L G + AG Sbjct: 112 VIVCLNKIDEVPPE---AVDGVAAAVGGWGYTVRPVSARTGAGLAALRAELAG-TYVLAG 167 Query: 215 QSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFG 274 SG GKSSLLN L + DIS G G+HTT L+ V D+PG + Sbjct: 168 PSGAGKSSLLNHLHPG-LALRVGDISARLGRGRHTTRHVELFALNAEALVADAPGFNQLE 226 Query: 275 LWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE 334 L L PE + F EF YLG C++R+C H +PGCA+REA R+ Y L Sbjct: 227 LT-LAPELLAGYFPEFRPYLGRCQFRNCLHRDEPGCAVREA------NLERYGMYRDFLA 279 Query: 335 SM---AQVKTRKNF 345 + AQ + R Sbjct: 280 EVLVSAQKQRRTAE 293 >UniRef50_C4FBQ3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FBQ3_9ACTN Length = 382 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 88/350 (25%), Positives = 137/350 (39%), Gaps = 44/350 (12%) Query: 25 SKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCN-----------IRRTIRS- 72 E D E + G V+ + + G + R R Sbjct: 28 RSELAGTLDIPLEEIELGAVVRLDRGFPMIATRSGVLLRAEHAVDFAKGKPGKRGKRSKR 87 Query: 73 ----------------LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVL--TRPDFYD 114 GD V R G++ V R + R Sbjct: 88 AADAEVASSAGVDGMLPSVGDVVAVRVTSGHD-----MGVILHVLPRRTSFERWRGKNRG 142 Query: 115 GVKPIAANIDQIVIVSAILPE-----LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEG 169 + +AAN+D I IV + E L + + R LV +P++VL K+D + Sbjct: 143 ERQVLAANVDVIFIVQPLGAERDTLPLMRDRVARSLVLARDCGADPVVVLTKVDRCEPAE 202 Query: 170 MAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS-IFAGQSGVGKSSLLNALL 228 +A V + G RV+ SS T +GL + + + G+SG GKS+LLN LL Sbjct: 203 VANVCGALRRLAGTGVRVIATSSLTGEGLDEVRSCIPQGSVGMILGESGAGKSTLLNTLL 262 Query: 229 GLQKEILTNDISDNSGLGQHTTTAARLYHFPHG-GDVIDSPGVREFGLWHLEPEQITQGF 287 G + + TN + + G+HTT A + P G + D PG+R L E + + F Sbjct: 263 GSEA-LETNAVRERDDAGRHTTVARIMVALPEPCGVIADCPGLRSLPLVGHER-GLARSF 320 Query: 288 VEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 E + C++ DC H +PGCA+RE VE G+I ++R + + + M Sbjct: 321 PEIVEASRACRFNDCTHLHEPGCAVREGVECGEIEQSRLDAFLSLAREMR 370 >UniRef50_Q6XR83 Uvs038 n=3 Tax=cellular organisms RepID=Q6XR83_9BACT Length = 349 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 133/317 (41%), Gaps = 21/317 (6%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVN 92 ++ ++ +++G+ + L GD V+ N Sbjct: 26 ESNVAATFPARIVEIHREWMQFHNSEGEYRARALPALGVGLAVGDWVIVESRP------N 79 Query: 93 VKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQ 152 + + E + ++R + + N+D ++V + + +L ++RYL + Q Sbjct: 80 NEYWITQRMESVTQISRRTHEGNRQILVTNVDTALLVMGLDNDFNLRRMERYLAIVQAAQ 139 Query: 153 IEPIIVLNKIDLLDD--EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RI 209 + P+IVL K D+ D+ E + + +++ ++ V+ + + L L + Sbjct: 140 VMPVIVLTKQDIADNIAEKLEKIKQRL----PTHIPIIAVNGLHESTVMALAPWLRPGQT 195 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 + G SG GKS+L N L T D+ + G+HTTT+ L+ +G +ID+PG Sbjct: 196 LVLLGSSGAGKSTLTNTLTSS--AQPTGDVRKDDSKGRHTTTSRSLHQCTNGACIIDTPG 253 Query: 270 VREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 +R + + E + F + C++RDC+H +PGCA+R V R NY Sbjct: 254 LRSWS-PDADEESLGLAFDDITTLAMSCRFRDCEHQDEPGCAVRNVV-----DADRLHNY 307 Query: 330 HRILESMAQVKTRKNFS 346 ++L + + + Sbjct: 308 QKLLREVRRSQQTALER 324 >UniRef50_B6W6J9 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W6J9_9FIRM Length = 287 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 153/306 (50%), Gaps = 29/306 (9%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIR----SLVTGDRVVWRPGKPAAEGVNVKGIV 97 G +I V S D + C R R + GD V + + + KG + Sbjct: 3 GKIIKSQKEIYYVLS-DEKSYMCKARGVFRNKNIKPLVGDNVEFDVTEYS------KGYI 55 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPI 156 + +R + + RP+ ANIDQI+ I P L+L ID+Y+ CE + ++ I Sbjct: 56 TKILDRKNQIKRPN--------IANIDQILYFITIKNPSLNLFNIDKYISMCEYINVDVI 107 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I+++K DL D + + F+ +Y IGY+++ + ++ + E L G+ S +G S Sbjct: 108 IIVSKKDLADKKDLDFIK----MYEKIGYKLIFIDNYKDFPESEILEILRGKTSAVSGSS 163 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGKS+ L+ L+ +K+I IS+ S G++TT +++ ++ D+PG F + Sbjct: 164 GVGKSTFLSNLV--EKDIEIGSISEKSKRGKNTTRHVEIFNLEKNTNIFDTPGFDSFDID 221 Query: 277 HLEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 ++ E + F EF + CK++DC H +P C +++ + + I +TR+ENY + E Sbjct: 222 FIDDEKDLKYCFREFDN--NSCKFKDCNHINEPKCKVKDDLSKNIIEKTRYENYLTLFEE 279 Query: 336 MAQVKT 341 + + + Sbjct: 280 IKKRRQ 285 >UniRef50_Q04XB7 GTPase n=6 Tax=Leptospira RepID=Q04XB7_LEPBL Length = 318 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 153/308 (49%), Gaps = 20/308 (6%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRSL--------VTGDRVVWRPGKPAAEGVNVK 94 I+ +G + ++ S + V R +R +R++ V GD+++ P V Sbjct: 13 IISRVYGAYYEIYSPERGVVRAFLRGRLRTVSAEERHPFVVGDQILAEPS------VGKD 66 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQI 153 ++ ER S LTR + + AN DQ ++ ++ PE +DR L A Sbjct: 67 WVICERLERKSFLTRKSREGDTQVLCANADQTAVLISLKSPETKDGFLDRCLAAVFASGT 126 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 +P+I+ K+DL+ ++ +M IYRN+GY VL +S T G+ L++ L +++ Sbjct: 127 QPLILFTKLDLISEDE---AESRMKIYRNLGYPVLGISCTTGQGISELQKYLRRKMTFLV 183 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGKS+L+N L Q + T+ IS + G+HTTT + L G +IDSPG++E+ Sbjct: 184 GNSGVGKSTLINLLTRTQIQ-KTSGISVSKDKGKHTTTNSLLLVLEDGTTLIDSPGIKEW 242 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 G+ HL+ E+I + F E C+ +C GCA+ A+E + R ++ +L Sbjct: 243 GILHLKKEEILESFPELSSQKKHCEESNC-CKLSSGCAMLFALETESMTLERRKSLESML 301 Query: 334 ESMAQVKT 341 S+ Sbjct: 302 ASLGNPHR 309 >UniRef50_C7NDT0 Ribosome small subunit-dependent GTPase A n=2 Tax=Leptotrichia RepID=C7NDT0_LEPBD Length = 275 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 144/291 (49%), Gaps = 26/291 (8%) Query: 58 DGDVHRCNIRRTIR------SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPD 111 + +++ C +R T++ + + GD V + + ++E + +R + L RP Sbjct: 3 EENIYECKLRGTLKVKNDKMNCIIGDIVEFD---------EKEKVIEKIEKRKNFLYRP- 52 Query: 112 FYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGM 170 + ANID I I+ AI P + L+ + I +++L+KIDL+ E + Sbjct: 53 -------LIANIDFIGILFAIKSPNFDFTNFQKMLLNANSQNIPAVLILSKIDLVSKEEL 105 Query: 171 AFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGL 230 + + +S+ T G+ L++ + + + +G SG GKS+L+N L+G Sbjct: 106 EEFFNKFKQIFKETISIFPISTETNTGITELQQYINKKSVVISGPSGAGKSTLINTLIGE 165 Query: 231 QKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW-HLEPEQITQGFVE 289 + + TND+S + G+HTT +R + +ID+PG E +++ + F E Sbjct: 166 EV-LATNDVSQKTKKGRHTTIESRFFMSAPHSYIIDTPGFSTLDFPKLEEKKELEKLFPE 224 Query: 290 FHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 F +++ CK+R+C H +P CAI+E VE I++ R++ Y L+++ K Sbjct: 225 FLEFIPNCKFRNCIHVNEPNCAIKENVENSNISQERYDFYLYSLQNIRFNK 275 >UniRef50_B1AIK5 Putative ribosome biogenesis GTPase rsgA n=15 Tax=Ureaplasma RepID=RSGA_UREP2 Length = 303 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 80/319 (25%), Positives = 153/319 (47%), Gaps = 31/319 (9%) Query: 42 GIVISRFGMHADVESADGDV-HRCNIRRTIRS------LVTGDRVVWRPGKPAAEGVNVK 94 +IS + V D + + + + + GD V + Sbjct: 3 AKIISVVANNFYVHLYDLKIQIKAIPKGIFKHNSHELKPMVGDDVEVE-------LIGNT 55 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 ++ ++ER + L RP ANID ++IV +I P+L+ +++YL E I Sbjct: 56 YLITKIYERYNQLIRPK--------VANIDIVLIVVSIVQPDLNTLSLNKYLAFYEARNI 107 Query: 154 EPIIV-LNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIF 212 + +++ L+K DL ++ +N+ + Y+ Y V ++ ++ + L+E + + Sbjct: 108 KNVLIGLSKYDLANNHLKQKINKLILDYKKNNYAVFIL--TKENDILLLKEKIKSKTLCL 165 Query: 213 AGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE 272 AG SGVGKS+L+N L + T +IS G+HTTT+ +L F +G ++D+PG Sbjct: 166 AGNSGVGKSTLINKLDPS-IQQRTQEISHFLNRGKHTTTSTKLISFANG-FLVDTPGFGN 223 Query: 273 FGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRI 332 + +L ++ F +F +Y CK+ +C H +P CAI++AV+E I R+++Y +I Sbjct: 224 LEV-NLTKNEMANAFNDFANYARFCKFSNCLHIEEPECAIKKAVDEKLIVNWRYDDYLKI 282 Query: 333 LESMAQ--VKTRKNFSDTD 349 ++ + +K + + Sbjct: 283 IKELPNDVLKIKTRAQNRK 301 >UniRef50_B9RMG0 GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RMG0_RICCO Length = 500 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 88/368 (23%), Positives = 156/368 (42%), Gaps = 75/368 (20%) Query: 29 PDYDDNLFGEPDEGIVISRFGMHADV-------------ESADGD----------VHRCN 65 PD NL G V + V +S + + V R Sbjct: 83 PDTKPNLSDSQAVGTVAAAQANFMRVIIQSLPPSSGTFLKSPEEEDSRIGVELLCVVRAV 142 Query: 66 IRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQ 125 +++ R ++ GD+VV + + V+ +G++E V +R++ + + P AN+D Sbjct: 143 LKKIRRRVLVGDKVVV----GSIDWVDRRGMIENVFQRSTEI--------LDPPVANVDH 190 Query: 126 IVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 ++++ ++ P++ + R+LV E+ I + LNK +L+D+E + ++ R+ G Sbjct: 191 LLVLFSMDQPKIEPFALTRFLVEAESTGIPLTLALNKSELVDEETLIAWKSRL---RSWG 247 Query: 185 YRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQK------------ 232 Y L S ++ GL L L + ++ G SGVGKSSL+NAL + Sbjct: 248 YEPLFCSVESKLGLDSLAYILREQTTVIVGPSGVGKSSLINALRNKPRACDVAENDNWFD 307 Query: 233 ---------EILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQI 283 E ++S SG G+HTT L GG + D+PG + L + + + Sbjct: 308 PMLGSKWFEEQRVGEVSTRSGRGKHTTRNVSLLPLSAGGYLADTPGFNQPSLLKVTKQSL 367 Query: 284 TQGFVEFHDYL-----GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 + F E L C + DC H +PGC + E R+ Y ++L+ + Sbjct: 368 AETFPEIQKMLSSGGPAKCSFNDCLHLGEPGCIVNGDWE-------RYSFYFQLLDEI-- 418 Query: 339 VKTRKNFS 346 + R+ F Sbjct: 419 -RIREEFQ 425 >UniRef50_Q73J49 GTPase YjeQ, putative n=1 Tax=Treponema denticola RepID=Q73J49_TREDE Length = 364 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 78/333 (23%), Positives = 153/333 (45%), Gaps = 28/333 (8%) Query: 30 DYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRS--------LVTGDRVVW 81 D+ + E + G +I G + D + ++ + + GD + + Sbjct: 11 DFFKDKKIEKEVGRIIFFGGTSYKIICKDVEK-EARLKGSFKKECEISGYYPTVGDWIGF 69 Query: 82 RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFY---DGVKPIAANIDQIVIVSAILPELSL 138 + ++ +++ ++ER + ++R D + + IAANID I ++ + +L Sbjct: 70 ESQENSSI-----ALIDFLYERKNKISRTDPRLGIELEQIIAANIDTAFICMSLNKDSNL 124 Query: 139 NIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGL 198 N + RY+ A IE +++L K DL E + +V +S D L Sbjct: 125 NRLARYVFAL--QNIETVLLLTKADL--SETREDAENLIKKIY-PHLKVYCISIFEPDSL 179 Query: 199 KPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYH 257 + ++ + S+ G SGVGKSSL+N+L G + + T++I+ G HTTT ++ Sbjct: 180 ENIKYYFKKGKTSVLLGSSGVGKSSLINSLTGKEI-LRTSEINKKIDKGVHTTTNRQIIS 238 Query: 258 FPHG-GDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAV 316 G ++D+PG++ G+W + + F + + C + DC H + GCA+ EA+ Sbjct: 239 LGEDAGVIMDTPGMKVLGIW--DSDSGENSFADITELKSKCLFSDCTHTCEKGCAVLEAL 296 Query: 317 EEGKIAETRFENYHRILESMAQVKTRKNFSDTD 349 + G + + R+E Y ++L+ ++K R+ Sbjct: 297 KTGLLDKNRYELYLQLLKE-DRIKIRREKRQEK 328 >UniRef50_A4S3D3 Predicted protein n=3 Tax=Mamiellales RepID=A4S3D3_OSTLU Length = 352 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 27/298 (9%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ + ++ GD VV + V +G+++ V R S L +P Sbjct: 14 VARALLKKIKKRVLVGDEVVL----SGVDWVQSRGMIDDVVGRRSELV--------EPPI 61 Query: 121 ANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN+DQ ++V A+ P L + + R+LV+ E ++ +VLNK +LL + +A ++ Sbjct: 62 ANVDQALLVFALEQPPLEVKQLTRFLVSMEATKVPFTLVLNKCELLSEVEVADWRARL-- 119 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI---LT 236 + GY ++S T G++ LEEAL G+ ++ AG SGVGKSSL+N Sbjct: 120 -ESWGYDAKVISVATGQGVEELEEALRGKTTVLAGPSGVGKSSLINRFRFGSALADLQSV 178 Query: 237 NDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL-- 294 + SG G+HTT L GG + D+PG L + +++ F E D L Sbjct: 179 KGVGTRSGRGKHTTRHVSLLRLDVGGFLADTPGFGYPSLEGFDTDKLAMCFPEIRDALAS 238 Query: 295 --GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD 350 C++ DC H +PGC + + E E R++ Y+ + E + Q+ + + + Sbjct: 239 SDARCQFSDCTHRHEPGCVVVDECWE----ERRYDLYYDLFEEVKQIADTERMASGRE 292 >UniRef50_UPI0001982B97 PREDICTED: hypothetical protein isoform 4 n=2 Tax=Vitis vinifera RepID=UPI0001982B97 Length = 519 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 91/429 (21%), Positives = 160/429 (37%), Gaps = 108/429 (25%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD 60 +S+ +K R + ++ L G+V + V D Sbjct: 41 ISRKPQNKNLLRAKQTVKHLSSLSPTLPVNHRPLLSATEAVGMVAAAQANFMRVIVEDSR 100 Query: 61 V-------------------------HRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKG 95 V R +++ R ++ GD+V+ + + V+ +G Sbjct: 101 VEDGDGGGDGDGDGDAVRVGVELLCVVRAVLKKIKRRVLVGDKVLV----GSIDWVDRRG 156 Query: 96 IVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE 154 ++E V R S + + P AN+D ++++ A+ P+L + + R+LV E+ I Sbjct: 157 VIENVFSRKSEI--------LDPPVANVDHLLVLFAMEQPKLEVYSLTRFLVEAESTGIP 208 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAG 214 + LNK +L+D+E ++ R+ GY + S ++ GL L +L + ++ G Sbjct: 209 ITLALNKSELVDEETRVAWKSRL---RSWGYGPVFCSVESKFGLDTLAFSLREQTTVIVG 265 Query: 215 QSGVGKSSLLNALLGLQ------------------------------------------- 231 SGVGKSSL+NAL Sbjct: 266 PSGVGKSSLINALRSNHPLINVSSEENNWFDSVAICLDPICPHVSVSISLCTVLRMHHFQ 325 Query: 232 -------KEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQIT 284 +E ++S SG G+HTT L GG + D+PG + L + + + Sbjct: 326 ILGSKLLEEQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLA 385 Query: 285 QGFVEFHDYL-------GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 Q F E L C + DC H +PGC ++ E R+ Y ++L+ + Sbjct: 386 QTFPEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWE-------RYPYYFQLLDEI- 437 Query: 338 QVKTRKNFS 346 K R+ F Sbjct: 438 --KIREEFQ 444 >UniRef50_Q8EUL6 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Mycoplasma penetrans RepID=RSGA_MYCPE Length = 287 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 21/280 (7%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ R + GD V + + + ++E + ER ++L RP Sbjct: 27 VIRKKLKQEDRIITVGDNVEFVKDQY-------EYVIEKIDERKNLLIRPK--------V 71 Query: 121 ANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIE-PIIVLNKIDLLDDEGMAFVNEQMD 178 ANID ++IV+++ P+ S ++++L E I II +K+DLL+ + +N+ + Sbjct: 72 ANIDTLIIVNSVKEPDFSSYGLNKFLAFYEARNINNVIIYFSKMDLLNKQESKNMNQIIS 131 Query: 179 IYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTND 238 Y GY VL S + + + + + FAGQSGVGKS+L+N L+ E+ T + Sbjct: 132 QYEQNGYIVLN-SLDKEKNKEKILNMIKNNVVCFAGQSGVGKSTLINFLIP-DLELRTQE 189 Query: 239 ISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCK 298 IS G+HTTT++ + F G VID+PG L + E + F +F + CK Sbjct: 190 ISQALNRGKHTTTSSLMIPFNEG-FVIDTPGFGSLDLNMTQLE-LANSFTDFRNNSVHCK 247 Query: 299 YRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 +++C H + C I++ V+E KI + R+ +Y ++ + + Sbjct: 248 FKNCLHTNEQNCFIKKMVDENKIYKQRYLDYLKMFSEIKK 287 >UniRef50_Q46I43 Putative ribosome biogenesis GTPase rsgA n=2 Tax=Prochlorococcus marinus RepID=RSGA_PROMT Length = 312 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 86/325 (26%), Positives = 136/325 (41%), Gaps = 45/325 (13%) Query: 33 DNLFGEPDEGIVISRFGMHADVESADGDV-------------HRCNIRRTIRS----LVT 75 + +GIV++ VE + C R + + Sbjct: 2 NKNKSNKLKGIVVALKANFLIVEIDHKNFKDHSFDQFYGKIRLLCIRRSKLNYQGLFIDV 61 Query: 76 GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-P 134 GD V + + N + +V V R S L RP AN+ + I + P Sbjct: 62 GDIVCVE----SIDYKNKRAVVSDVEPRQSFLKRPA--------VANVTLVSICISADEP 109 Query: 135 ELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHT 194 + R+L+ E IEP+I+L KIDL+ + ++ +++ GY + VS H Sbjct: 110 LFDMEQTSRFLLTAECANIEPLIILTKIDLITKNDLIL---YINKFKSWGYDCIPVSIHN 166 Query: 195 QDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAA 253 G+ L E L ++++ AG SGVGK+SL+N L+ + T+ +S G HTT Sbjct: 167 SQGIDSLIERLRKTKLTVLAGPSGVGKTSLINHLIPT-VSLPTSSVSKKLKRGTHTTRHV 225 Query: 254 RLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL--GLCKYRDCKHDTDPGCA 311 L+ +G + D+PG + EP F EF L CK+R+C H +PGC Sbjct: 226 ELFAIGNGSLLADTPGFNRPEIVC-EPSDFAFLFPEFRTQLSNSQCKFRNCLHRDEPGCV 284 Query: 312 IREAVEEGKIAETRFENYHRILESM 336 I + +E R+ Y + LE M Sbjct: 285 IDKDLE-------RYPFYRQNLEEM 302 >UniRef50_A4E9Q8 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9Q8_9ACTN Length = 317 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 86/312 (27%), Positives = 135/312 (43%), Gaps = 20/312 (6%) Query: 39 PDEGIVISRFGMHADVESADGDVHR------CNIRRT--IRSLVTGDRVVWRPGKPAAEG 90 G V+ V +AD R + GDRV R Sbjct: 1 MQLGAVVRLDRGFPLVVTADDTFRAEHAVGFAKSRGEDEVLLPAVGDRVAVRRAPGHD-- 58 Query: 91 VNVKGIVEAVHERTSVL--TRPDFYDGVKPIAANIDQIVIVSAILP-ELSLNIIDRYLVA 147 G++E V R + R + + +N+D ++IV A+ E+ L+ + R LV Sbjct: 59 ---MGVIECVLPRRTSFERWRGRARGERQVLCSNVDSVLIVQALGAGEVLLDRVARSLVL 115 Query: 148 CETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG 207 EP++VL K D D E + +++ RV++ SS GL + + Sbjct: 116 ALDCDAEPVVVLTKADRCDAEELERDLDRVRRLVGPDVRVIVTSSAEGRGLDEVRICVPA 175 Query: 208 R-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHG-GDVI 265 ++ G+SG GKS+LLNALLG + T + + G+HTT A + P G + Sbjct: 176 GSCAMILGESGAGKSTLLNALLGHD-TLATGGVRERDDQGRHTTVARVMVALPGDAGVIA 234 Query: 266 DSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETR 325 D+PG+R L E + + F E + C++ DC H +PGCA+REA + G+I R Sbjct: 235 DAPGLRSLPLVGHER-GLARAFPEIVEASRACRFGDCTHTHEPGCAVREAEDAGQIDSLR 293 Query: 326 FENYHRILESMA 337 E + + SM Sbjct: 294 LETFQSLASSMR 305 >UniRef50_B9HDG9 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HDG9_POPTR Length = 394 Score = 234 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 87/343 (25%), Positives = 158/343 (46%), Gaps = 50/343 (14%) Query: 29 PDYDDNLFGEPDE-GIVISRFGMHADV-ESADGD-----------------VHRCNIRRT 69 PD+ + G V + V +A+ + V R +++ Sbjct: 38 PDHTPTNLSDSQAIGTVAASQANFMRVIVTAEPEKIEDSSSSSKVGTELLCVVRAVLKKI 97 Query: 70 IRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV 129 R ++ GD+VV + + V+ +G++E V +R+S + + P AN+D+++++ Sbjct: 98 KRRVLVGDKVVV----GSIDWVDRRGMIENVFQRSSDI--------LDPPVANVDRLLVL 145 Query: 130 SAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL 188 ++ P+L ++ R+L+ E+ I + LNK +L+D + ++ + ++ R+ GY L Sbjct: 146 FSVEQPQLESFVLTRFLIEAESTGIPITLALNKAELVDQQVLSDWDTRL---RSWGYEPL 202 Query: 189 MVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQH 248 S ++ GL L L + ++ G SGVGKSSL+NAL +S SG G+H Sbjct: 203 FCSVDSKMGLDSLASVLRDQTTVIVGPSGVGKSSLINALRNKPNSQRVGKVSTRSGRGKH 262 Query: 249 TTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG-----LCKYRDCK 303 TT L GG + D+PG + L + + + Q F E LG C + DC Sbjct: 263 TTRNVSLLPLGGGGYLADTPGFSQPSLLKVTKQSLAQYFPEIRKMLGDNEQAKCAFNDCL 322 Query: 304 HDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 H +PGC ++ E R+ Y ++L+ + + R+ F Sbjct: 323 HVGEPGCIVKGDWE-------RYPLYFQLLDEI---RIREEFQ 355 >UniRef50_A3V5J3 Putative uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V5J3_9RHOB Length = 345 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 86/306 (28%), Positives = 135/306 (44%), Gaps = 19/306 (6%) Query: 38 EPDEGIVISRFGMHADVESADGDVHRCNIRR-TIRSLVTGDRVVWRPGKPAAEGVNVKGI 96 + + + +ADG + T + GD V+ P + Sbjct: 27 DLTPARIANVHRDRVVALTADGSIDLTLDPGLTTAVVAVGDFVLCAPA---------QYR 77 Query: 97 VEAVHERTSVLTRPD--FYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIE 154 + V +R + L+R + IAAN+D + I ++ + + ++RYL + Sbjct: 78 LIRVLDRQTELSRGTEYHTGDKQLIAANLDTLFITTSCNADFNPARLERYLALAHDAGVR 137 Query: 155 PIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTG-RISIFA 213 P+IVL K D DD F ++ + R++ VL V++ D + FA Sbjct: 138 PVIVLTKADQTDDP-AGFADQARALGRDLA--VLAVNAKAADLPAHFAPWCGQGQTIAFA 194 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 G SGVGK+++ NAL G T DI D+ G+HTTT L+ GG +ID+PG+R Sbjct: 195 GTSGVGKTTIANALTGGNA--ATRDIRDDDARGRHTTTGRSLHRMLAGGWLIDTPGMRGL 252 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL 333 GL + I F E D CK+RDC H+ +PGCA++ AV G I R + ++ Sbjct: 253 GLAEVG-FGIDATFPEISDLAAQCKFRDCAHEREPGCAVQAAVAAGAIDPDRLARFKKLK 311 Query: 334 ESMAQV 339 Q Sbjct: 312 SENTQA 317 >UniRef50_C8W7M5 GTPase EngC n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7M5_ATOPD Length = 394 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 90/366 (24%), Positives = 158/366 (43%), Gaps = 50/366 (13%) Query: 16 ANHQRRLKTSKEKPDYDDNLFGEPDEGI---------VISRFGMHADVESADGDVHRCNI 66 ++ +S + Y D + +G+ V+ V S G V R Sbjct: 31 PAFEQLTPSSAQMQAYTDVVSELEAQGVSRQMMTMACVVRLDRGFPAVVSEQG-VFRAEF 89 Query: 67 -----RRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR--PDFYDGVKPI 119 + ++ GD V R + GI+EA+ R + + R + + Sbjct: 90 AARVTKGQNSTVAVGDWVCARIPESHD-----MGIIEAILPRETDIARWKGGARGQKQTL 144 Query: 120 AANIDQIVIVSAILPE-LSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMD 178 AAN+D +++V A+ E +S++ I R V + +VL K D+ E +A E Sbjct: 145 AANVDLVLVVQALDGETISVDRIVRSAVISKDCGAACAVVLTKSDVAGPELLA--QEISS 202 Query: 179 IYRNIGYRVLMV---SSHTQD-------------------GLKPLEEALTGR-ISIFAGQ 215 I +G V +V S + G+ + + I+I G+ Sbjct: 203 ITAALGSTVKIVATASKLEGEKTDVLADLAQTAQDLGAAWGIDAVRNLVPYGSIAIVLGE 262 Query: 216 SGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL 275 SG GKS+LLNALLG + + T ++ ++ G+HTT A R+ P G ++D PG+R + Sbjct: 263 SGAGKSTLLNALLGHEA-LETGEVRESDKAGRHTTVARRMVALPEAGVIVDEPGLRSLPI 321 Query: 276 WHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILES 335 E + + F + CK+RDC H +PGC++++A+ EG+I E + + Y + + Sbjct: 322 VGHER-GLQKVFPHISEAAQTCKFRDCTHTHEPGCSVQDALHEGQITEPQLKAYLSLAKE 380 Query: 336 MAQVKT 341 M + + Sbjct: 381 MRESQQ 386 >UniRef50_B5IIZ2 GTPase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIZ2_9CHRO Length = 379 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 38/316 (12%) Query: 41 EGIVISRFGMHADVESAD-----GDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGV 91 G+V++ +A V C R + + GDRV + Sbjct: 28 TGLVVAMQANYAMVGLDQPGPEARTRLLCTRRTRLAKSGLAICVGDRVRVD----GIDWR 83 Query: 92 NVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACET 150 +G V AVH R L RP AN+ +IV+V+++ P L + R+L+ E Sbjct: 84 AGRGAVAAVHPRHGRLERPA--------VANVSRIVVVASLAEPALDPLQLTRFLITAEA 135 Query: 151 LQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEAL-TGRI 209 ++VL+K DL+ ++ R GY + ++ + +GL+ L L I Sbjct: 136 CGSPVLLVLSKADLVPPAERDAWCRRV---RGWGYPPVALAVPSGEGLEALRRELSQPGI 192 Query: 210 SIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPG 269 ++ G SGVGKSSLLNAL+ + + +S G+HTT L+ V D+PG Sbjct: 193 AVLCGPSGVGKSSLLNALVP-ELALRVAAVSGRLQRGRHTTRHVELFGIGPQALVADTPG 251 Query: 270 VREFGLWHLEPEQITQGFVEFHDY---LGLCKYRDCKHDTDPGCAIREAVEEGKIAETRF 326 L +PE + F E G C++ DC H +PGC++ E R+ Sbjct: 252 FNRPALPR-QPELLGPLFPEVRRQLARAGSCRFSDCLHRGEPGCSVGMDWE-------RW 303 Query: 327 ENYHRILESMAQVKTR 342 +Y + LE++ Q + R Sbjct: 304 PHYSQCLEAIEQEQHR 319 >UniRef50_B5Y7I4 Ribosome small subunit-dependent GTPase A n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7I4_COPPD Length = 289 Score = 231 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 27/306 (8%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTI---RSLVTGDRVVWRPGKPAAEGVNVKGIVE 98 G V+ R + V S + V+ +++ + ++ DRV + P + + VE Sbjct: 7 GRVLRRERYNVLV-SYENSVYLGLVKKKVWEQDKVLVNDRVWFEPIT------DTEVSVE 59 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPII 157 R + RP AN+D +V V + P+ + +D L I ++ Sbjct: 60 RTTGRKNYFLRP--------PVANLDLLVYVHSFKNPQCDVRYLDLTLGLATLQNIPVLV 111 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSG 217 + +K DLL DE + +Y ++GY V++ S + L L+E L G+ +F+G +G Sbjct: 112 LFHKADLLRDED---IQPWTSLYTSLGYDVMVTSVY--YDLSALKERLRGKTVLFSGPTG 166 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 VGKSSL+ AL + DIS G G+HTT+ L V+D+PG + Sbjct: 167 VGKSSLVKALW-KDASVRVGDIS-KVGRGKHTTSWVELLPLDD-TYVVDAPGFSLLEMPA 223 Query: 278 LEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMA 337 + P I + F E C + DC H +P CA++EAV++G IAE+R+ +Y L+ Sbjct: 224 MNPWDIQRMFPEIETTAKGCFFSDCLHLKEPSCAVKEAVKKGLIAESRYNSYLYFLDKQQ 283 Query: 338 QVKTRK 343 + ++ Sbjct: 284 EEAKKR 289 >UniRef50_Q601H2 Putative ribosome biogenesis GTPase rsgA n=4 Tax=Mycoplasma RepID=RSGA_MYCH2 Length = 285 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 35/302 (11%) Query: 41 EGIVISRFGMHADVES-ADGDVHRCNIRRTIR-----SLVTGDRVVWRPGKPAAEGVNVK 94 +G V+ DV + ++ + S + GD V + K Sbjct: 2 KGQVVRIIAGFYDVVDLKNRKLYPLLRGSGLLRLNETSPIVGDFVDFE----------EK 51 Query: 95 GIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQI 153 G ++ ++ER + L RP ANIDQ ++ +I P S ++D++L+ E I Sbjct: 52 GFIKKIYERKNQLIRPK--------VANIDQALVFISIREPNFSSLLLDKFLLVIEAKNI 103 Query: 154 EPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFA 213 I+++ KIDL + + Y+ + Y + +++ + L+ L +++ Sbjct: 104 PVILLVTKIDLDSN-----FENLLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVI 158 Query: 214 GQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREF 273 GQ+GVGK+S +N L K+ +IS G+HTT ++ +IDSPG F Sbjct: 159 GQTGVGKTSFINNFL--DKKFAIQEISQTLNRGKHTTRVVQIIE-KENFRIIDSPGFSSF 215 Query: 274 GLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP--GCAIREAVEEGKIAETRFENYHR 331 + +I F F + CK+R C H + C I+ A+++GKI E R++NY Sbjct: 216 SYSEISKNEIRNAFKIFKKFSSDCKFRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLY 275 Query: 332 IL 333 L Sbjct: 276 FL 277 >UniRef50_Q4A6T0 Putative ATP/GTP-binding protein n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6T0_MYCS5 Length = 276 Score = 230 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 77/304 (25%), Positives = 138/304 (45%), Gaps = 36/304 (11%) Query: 43 IVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIVE 98 V FG A+V + + ++ GD V ++ Sbjct: 3 RVFELFGQTANVCDLENNCKLLPFAGRLKKLKITPKVGDIVEVEND-----------LIT 51 Query: 99 AVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPII 157 + R + L RP ANIDQ+++ ++ P+ S ++D+YL E+ I+ II Sbjct: 52 DIKPRKNELIRPK--------VANIDQVLVFLSVKEPDFSSFLLDKYLAIVESKNIDLII 103 Query: 158 VLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSG 217 L K DL + N Y Y+V ++SS + +++ + SI GQSG Sbjct: 104 FLTKSDL----DLELANHWKQKYEMQNYKVFLLSS-NDNNYDEIKKLFDKKFSIVMGQSG 158 Query: 218 VGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWH 277 VGK++ +N + T IS + G+HTTT+A++ F +G +IDSPG Sbjct: 159 VGKTTFINNISNNNY--KTQQISKSLSRGKHTTTSAKIISFLNG-FLIDSPGFSS---LD 212 Query: 278 LEPE-QITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESM 336 +E E + + ++ F + LC+++DC H+ + C ++ + + E R++NY ++L+ Sbjct: 213 VEKEINLNKSYLNFKELAKLCEFKDCMHNFEKNCNVKLNLNSNLVPEFRYKNYLKLLKEQ 272 Query: 337 AQVK 340 + K Sbjct: 273 NERK 276 >UniRef50_B5RLH3 Putative ribosome biogenesis GTPase rsgA n=22 Tax=Borrelia RepID=RSGA_BORDL Length = 313 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 22/297 (7%) Query: 54 VESADGDVHRCNIRRTI--------RSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTS 105 VE V+ I+ LV GD V K ++ ER + Sbjct: 19 VEVNTNTVYEGVIKGKFLNTREKEYSPLVPGDFVC------GDIYDEHKVYIKERMERRN 72 Query: 106 VLTRPDFYDGV-KPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKID 163 V R + + + I +NID I+IVS+ PE + IDR L+ E I PII++NK+D Sbjct: 73 VFWRYNKKVALRQVIVSNIDNILIVSSATLPEFKNSFIDRTLIVAEEQGITPIILVNKVD 132 Query: 164 LLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSL 223 + V+ + IY +GYRV+ S T G+ +++ + + F GQSGVGKSSL Sbjct: 133 ---EGINLRVDSFIKIYEYLGYRVIKTSVVTLQGIDEVKKIIKNSRTSFIGQSGVGKSSL 189 Query: 224 LNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQI 283 +N ++ L N+IS G+HTT A +H + +ID+PG++EFG+ L ++ Sbjct: 190 IN-VIDLNASQAINEISYKYARGRHTTVYAVAFHSDNKI-LIDTPGIKEFGIEGLGYLEL 247 Query: 284 TQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVK 340 F EF + LC++ C H +P C + + KIAE R+ +Y +I + + K Sbjct: 248 KYYFKEFKYFNDLCRFNSCLHINEPNCFVISQI-GFKIAEARYNSYLKIFSELKRYK 303 >UniRef50_O64802 T1F15.10 protein n=14 Tax=Magnoliophyta RepID=O64802_ARATH Length = 450 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 85/377 (22%), Positives = 150/377 (39%), Gaps = 85/377 (22%) Query: 30 DYDDNLFGEPDEGIVISRFGMHADVE----------SADGD----------VHRCNIRRT 69 ++ +L G V + V D D V R +++ Sbjct: 22 EHKPSLLESQAIGTVATAQANFMRVIVQDVANSVTSDDDNDSSKTGVELLCVVRAVLKKI 81 Query: 70 IRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIV 129 R ++ GD+V+ + + V+ +G++E V R S + + P AN+D ++++ Sbjct: 82 RRRVLVGDKVLV----GSIDWVDRRGMIENVFHRRSEI--------LDPPVANVDHLLVL 129 Query: 130 SAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL 188 ++ P+L + R+LV E+ +I + LNK +L+ +E + ++ R Y L Sbjct: 130 FSLDQPKLEPFTLTRFLVEAESTRIPLTLALNKTELISEEELETWKIRL---RGWNYEPL 186 Query: 189 MVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ----------------- 231 S T+DGL + L + S+ G SGVGKSSL+N L Sbjct: 187 FCSVGTKDGLDDIAFVLRDQTSVIVGPSGVGKSSLINVLRSNHGGGVVEDENWFEPLKFC 246 Query: 232 --------------------KEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVR 271 + ++S SG G+HTT L GG + D+PG Sbjct: 247 LPDSYELSFCDIQMLGNKWFDDQRVGEVSSRSGRGKHTTRNVSLLPVSEGGYLADTPGFN 306 Query: 272 EFGLWHLEPEQITQGFVEFHDYL--GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 + L + + F E + + C +RDC H +PGC ++ E R+ Y Sbjct: 307 QPSLLKVTKHSLAHCFPEIRNMIESEKCGFRDCLHIGEPGCVVKGDWE-------RYPYY 359 Query: 330 HRILESMAQVKTRKNFS 346 ++L+ + + R+ F Sbjct: 360 LQLLDEI---RIREEFQ 373 >UniRef50_A0JYB3 GTPase EngC n=8 Tax=Micrococcineae RepID=A0JYB3_ARTS2 Length = 371 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 95/356 (26%), Positives = 161/356 (45%), Gaps = 51/356 (14%) Query: 13 RVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHAD-VESAD----GDVHRCNIR 67 R+ N + +K++P +DD + G +I+ V D V R Sbjct: 14 RIRPNKKGSRPRTKDRPSHDDAV-----TGRIITVDRGRYTAVVGEDSGNERTVIAARAR 68 Query: 68 RTIRSLVT-GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDG--VKPIAANID 124 RS V GD V A + + + +R ++L R + + AN D Sbjct: 69 ELRRSPVVAGDFVSLVGDVSGA--PDTLARLVKIQDRRTLLRRSADDTDPIERAVVANAD 126 Query: 125 Q-IVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI 183 Q +V+V+A PE IDR LVA IEP++++ K D+ D + + YR++ Sbjct: 127 QLVVVVAAANPEPRTGFIDRALVAAYDAGIEPLLLVTKADVKDPTEL------LSNYRHL 180 Query: 184 GYRVLM----------VSSHTQDGL---------KPLEEALTGRISIFAGQSGVGKSSLL 224 + V++ + + + DGL L L G++++ G SGVGKS+++ Sbjct: 181 DFPVIISRTADAAASGIDARSDDGLSARLDSDAVSQLRAHLNGKVTVMLGHSGVGKSTMV 240 Query: 225 NALLGLQKEILTNDISDNSGLGQHTTTAARLYHF---PHGGDVIDSPGVREFGLWHLEPE 281 NAL G ++ T ++ +G G+HT+++A P G +ID+PG+R FGL H++P+ Sbjct: 241 NALTGAER--ATGGVNAVTGRGRHTSSSALALRISDAPAGSWIIDTPGIRSFGLAHVDPD 298 Query: 282 QITQGFVEFHDYLGLCKYRDCKHDTD-PGCAIREAVEEGKIAET---RFENYHRIL 333 +I + F + C+ R CKHD C + V +G + R + R+L Sbjct: 299 RILRSFPDLEPGTDACE-RGCKHDASAVNCGVDAWVAQGHAGPSGAARLASLRRLL 353 >UniRef50_B9CMV6 Ribosome-associated GTPase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CMV6_9ACTN Length = 393 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 78/341 (22%), Positives = 132/341 (38%), Gaps = 37/341 (10%) Query: 30 DYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNI-----RRTIRSLVTGDRVVWRPG 84 + + V+ V S+ G V R + + GD V R Sbjct: 53 QEAGVSSAQLELACVVRLDRGFPAVVSSVG-VFRAEFSARVTKGDNSKVAVGDWVCARIP 111 Query: 85 KPAAEGVNVKGIVEAVHERTSVL--TRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNII 141 GI+EA+ R S + R + +AAN+D +V A+ + S++ I Sbjct: 112 LNHD-----MGIIEAILPRKSEIARWRGSARGEKQTLAANVDVTFVVQALDERKTSIDRI 166 Query: 142 DRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ------ 195 R +V + ++VL K D + + ++ SS + Sbjct: 167 VRSVVIALDSNVRAVVVLTKADSVSPATLKRHLTLTHEVLGDAVTTIVTSSKLEVSHESF 226 Query: 196 --------------DGLKPLEEALTGRISIFA-GQSGVGKSSLLNALLGLQKEILTNDIS 240 G+ + E + G+SG GKS+LLNALLG + + T + Sbjct: 227 CDEMKQIVQKFHARWGMDAIREEIPQESVAIVLGESGAGKSTLLNALLGHEA-LETGKVR 285 Query: 241 DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR 300 + G+HTT A R+ P G ++D PG+R + E + + + F + CK+R Sbjct: 286 ASDKAGRHTTVARRMVALPKAGIIVDEPGLRSLPVAGHE-QGLAKVFPKISRAAAACKFR 344 Query: 301 DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKT 341 DC H +PGC +REA+ G+ + + + Y + M Sbjct: 345 DCTHVHEPGCGVREALRAGECSSAQVDAYLSLAHEMQVSAR 385 >UniRef50_A3CQN2 GTPase, putative n=3 Tax=Streptococcus RepID=A3CQN2_STRSV Length = 213 Score = 226 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 80/220 (36%), Positives = 125/220 (56%), Gaps = 13/220 (5%) Query: 129 VSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVL 188 +SA P+ + N++DR+LV E +I PII ++K+DLL+DE V + Y++IGY V+ Sbjct: 1 MSAKEPDFNANLLDRFLVLLEHKRIHPIIYISKLDLLEDEQSLDV--YVQAYQSIGYEVI 58 Query: 189 MVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQH 248 + L LTG+I++F GQ+GVGKS+LLN + ++ T +IS++ G G+H Sbjct: 59 KT-------TEELLPLLTGKITVFMGQTGVGKSTLLNKIAP-DLQLETGEISESLGRGRH 110 Query: 249 TTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDP 308 TT A Y+ +GG + D+PG E + Q F E ++ CK+R C H +P Sbjct: 111 TTRAVSFYNL-NGGKIADTPGFSSLDYEVSTAEDLNQAFPEIAEFSQSCKFRTCTHTHEP 169 Query: 309 GCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDT 348 CA++ AVE G+IA RF+NY + L + R+ + Sbjct: 170 ACAVKPAVESGQIASFRFDNYLQFLSEIEN--RRETYKKV 207 >UniRef50_A4XB51 GTPase EngC n=105 Tax=Bacteria RepID=A4XB51_SALTO Length = 374 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 99/368 (26%), Positives = 145/368 (39%), Gaps = 40/368 (10%) Query: 2 SKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDV 61 ++ + R+ R +T + + EG V + AD D Sbjct: 17 TRRREYDEDDVRIRPGRSSRPRTRRR------PRHADAVEGFVTAVDRGRYTCVLADADP 70 Query: 62 HRC-----NIRRTIRS-LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTR------ 109 + R R +V GDRV G + + R+SVL R Sbjct: 71 KQAPVTAMRARELGRKSVVVGDRVGLVGDTSGTPGA--LARIVRIAGRSSVLRRTAEDDA 128 Query: 110 -PDFYDGVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDD 167 + + AN DQ+VIVSA+ P IDR LVA I P++ L K DL Sbjct: 129 TTAEGRLERVVVANADQLVIVSALADPPPRTGFIDRCLVAAYDAGIAPLLCLTKADLAGP 188 Query: 168 EGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL 227 E E + Y + +++ L L L GRIS+ G SGVGKS+L+N L Sbjct: 189 E------EVLGYYAELELPHVLICP--DSTLDGLRGLLAGRISVLVGHSGVGKSTLVNRL 240 Query: 228 LGLQKEILTNDISDNSGLGQHTTTAARLYHFP-----HGGDVIDSPGVREFGLWHLEPEQ 282 + T G G+HT+T+ P G +ID+PG+R FGL H+ E Sbjct: 241 VP--AATRTVGQVSAIGRGRHTSTSVVALQLPPVADSAEGWIIDTPGIRSFGLAHVSAES 298 Query: 283 ITQGFVEFHDYLGLCKYRDCKH-DTDPGCAIREAVEEGKIAETRFENYHRILESMA-QVK 340 + GF + + C +C H +P C + V G+ R +Y R+L S A + + Sbjct: 299 LLHGFPDLTEGAADCP-ANCPHTIGEPLCGLGVRVTAGQADPRRLASYRRLLASRAGENE 357 Query: 341 TRKNFSDT 348 R S Sbjct: 358 PRTKPSSR 365 >UniRef50_Q98PN8 Putative ribosome biogenesis GTPase rsgA n=1 Tax=Mycoplasma pulmonis RepID=RSGA_MYCPU Length = 272 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 40/303 (13%) Query: 42 GIVISRFGMHADVESADGDVHRCNIRRTIRS----LVTGDRVVWRPGKPAAEGVNVKGIV 97 G V D++ D +R +R+ V GD VV+ + Sbjct: 3 GRVYQVISGFYDIKCED-KFYRVRAIGNLRNLKLNPVVGDLVVFDES------------L 49 Query: 98 EAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPI 156 + R ++L RP ANIDQ +IV ++ P+ S ++D++L E +I+ + Sbjct: 50 TKIEPRKNILIRPK--------VANIDQAIIVISLDQPKFSSFLLDKFLSIIEFQKIKVV 101 Query: 157 IVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQS 216 I+ K DL E + Y Y+ + S ++ K L + +IS+ GQS Sbjct: 102 IIFTKADLNTKEDI--------GYYLKTYQSYLTSLDDENSYKKLNDIFEKKISVLVGQS 153 Query: 217 GVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW 276 GVGK+++LN + T +IS G G+H+T ++ F + G +ID+PG + Sbjct: 154 GVGKTTILNKV--SLNNFFTQNISKALGRGKHSTRVVKMIDF-NNGQIIDTPGFSSIEIQ 210 Query: 277 HLEPEQITQGFVEFHDYLGLCKYRDCKHDTD--PGCAIREAVEEGKIAETRFENYHRILE 334 + + +++ F F Y CKYR C H + C I++ V+ +I R+ NY ++L+ Sbjct: 211 MSQKD-LSKSFESFDKYSQRCKYRHCLHQNERLEDCNIKQLVQSQEIPLFRYNNYLKLLD 269 Query: 335 SMA 337 + Sbjct: 270 EVK 272 >UniRef50_UPI0001C31887 GTPase EngC n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31887 Length = 348 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 139/336 (41%), Gaps = 37/336 (11%) Query: 16 ANHQRRLKTSKEKPDYDDNLFGEP--DEGIVISRFGMHADVESADG-DVHRCNIRRTIR- 71 R + + GEP V+S+ V D + + R +R Sbjct: 5 PAGIGRRDDLDAELATLRDALGEPGLSPARVLSQHSGVWLVAEPDAPEPRLVHARARLRD 64 Query: 72 ----SLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYD---GVKPIAANID 124 VTGD V G + V R + R + + +AAN++ Sbjct: 65 EAEGPPVTGDWVALDGGDA----------IAGVLPRHGAVVRRAVGEGRAERQVLAANVE 114 Query: 125 QIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIG 184 + V+ LPE + +R ++ +VL K D + + R++G Sbjct: 115 LAL-VAEPLPEPNERRAERLAAIAGAGEVPVALVLTKA----DLDDDADATALRLGRDLG 169 Query: 185 YR-VLMVSSHTQDGLKPLEEALTGR-ISIFAGQSGVGKSSLLNALLGLQKEILTNDISDN 242 + VS T DG+ + L ++ G SG GKS+L+NALLG +++ D+ + Sbjct: 170 LPDAIAVSVRTGDGIGIVRSLLPPGSTAVLLGPSGAGKSTLVNALLGEERQ-AVGDVRAS 228 Query: 243 SGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDC 302 G+HTT L P+GG +ID+PG+RE G+W + F + + C++ DC Sbjct: 229 DKRGRHTTVTRELLSLPNGGLLIDTPGMREVGMWD---GGVDDTFDDVAELAAGCRFADC 285 Query: 303 KHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338 +HD++P CA+R G +A R E + ++ A Sbjct: 286 QHDSEPDCAVR-----GVVAPERLEAWRKLAREQAW 316 >UniRef50_C1YSI8 Predicted GTPase n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YSI8_NOCDA Length = 387 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 83/335 (24%), Positives = 137/335 (40%), Gaps = 23/335 (6%) Query: 23 KTSKEKPDY-DDNLFGEPDEGIVISRFGMHADVE-------SADGDVHRCNIRRTIRSLV 74 + + D V S A + V R + Sbjct: 22 RRVERAFDAVAAASPHPLLPARVSSSRRGGAVIRLLREAAADYSPAVTRAAQADPSSAPC 81 Query: 75 TGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGV--KPIAANIDQIVIVSAI 132 GD V R +VEAV ER+ L R + +AANID +++ A Sbjct: 82 GGDWVAVRRS-------GDTWVVEAVLERSGSLVRQGVARDSHDQVLAANIDGVLVCEAA 134 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS 192 ++ ++R+L P++ + K +L D + + G V VS+ Sbjct: 135 DQGPNVGRLERFLSLAWASGATPVVAVTKAELAGDRLPEVLELVGSV--TAGADVHTVSA 192 Query: 193 HTQDGLKPLE-EALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTT 251 HT G++ L L G + G SG GKSSL+NA+ G + + T +I + T T Sbjct: 193 HTGLGVEELAARFLPGTTWVLLGTSGAGKSSLVNAVAGRKL-MDTGEIRHDRRGRHTT-T 250 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCA 311 +L P G V+D PGVR + + + + F + D C++RDC+H ++PGCA Sbjct: 251 RRQLLQLPGGALVLDIPGVRRIDVPG-DARGVDRTFADVSDLAEQCRFRDCRHGSEPGCA 309 Query: 312 IREAVEEGKIAETRFENYHRILESMAQVKTRKNFS 346 + AV+EG++ R E ++R+ ++R + Sbjct: 310 VTAAVDEGELDARRLERWNRLRRESEWNRSRGDAR 344 >UniRef50_C2BSD9 GTP-binding protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BSD9_9ACTO Length = 352 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 90/367 (24%), Positives = 154/367 (41%), Gaps = 50/367 (13%) Query: 1 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVE-SADG 59 MS+ + R + +K++P + + G+V++ V SA+ Sbjct: 1 MSRRDIGTDDPRVHVRPGKGSRPRTKKRPSFAHAV-----PGMVVAVDRGRFTVAISANC 55 Query: 60 DVHRCNIRRTIRS-LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRP----DFYD 114 V R R ++ GD V + + + ER +VL R + Sbjct: 56 MVQAVKARALGRKGVIVGDWVGLEGDTSGT--PDTLARIVTLEERQTVLRRSFDESEVGA 113 Query: 115 GVKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFV 173 K I AN Q++IV A PE +IDR +V+ ++ P++ + K DL V Sbjct: 114 REKLIVANATQMLIVVAARDPEPKRGMIDRAIVSALDAKVTPLLAVTKTDL------DSV 167 Query: 174 NEQMDIYRNIGYRVLMVSSHTQDG-----------------------LKPLEEALTGRIS 210 + Y +G +V ++ + + L+ L + L G ++ Sbjct: 168 PALIADYEAVGIKVFTLNRNLYEATAPVPSPVETHPSHLAPRPCAPRLQELHQQLQGEVT 227 Query: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 + G SGVGKS+L+NAL+ T ++++ +G G+HT+T+A G +ID+PGV Sbjct: 228 VLLGHSGVGKSTLVNALVPG-ANRATGEVNEVTGKGRHTSTSAVALPIGSQGWLIDTPGV 286 Query: 271 REFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTD-PGCAIREAVEEGKIAETRFENY 329 R FGL H++ + +GF E + C R C H D P C + E E R ++ Sbjct: 287 RSFGLAHVDAAGLLRGFTELYAIAQDCP-RGCAHAADAPDCLLDEHPE----LALRLASF 341 Query: 330 HRILESM 336 +L + Sbjct: 342 RSLLSEV 348 >UniRef50_B1V9R1 Putative ribosome biogenesis GTPase rsgA n=5 Tax=Acholeplasmataceae RepID=RSGA_PHYAS Length = 310 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 81/323 (25%), Positives = 155/323 (47%), Gaps = 38/323 (11%) Query: 39 PDEGIVISRFGMHADVESADGD-VHRCNIRRTIRS-----------------LVTGDRVV 80 + +VI ++ D + + + ++ + GD V+ Sbjct: 1 MKKALVIRFLAGIYYIQDLDNQTILKAQKKGVLKKSNFIQDNQLKNNRDKMSIKVGDIVL 60 Query: 81 WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI-LPELSLN 139 + K ++ A+ R + L RP+ ANIDQ+++V ++ P Sbjct: 61 YGMC-------YDKYLIYAILPRKNELKRPN--------IANIDQVLLVFSLVKPHFQTL 105 Query: 140 IIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLK 199 ++D++L+ + +++ I+V +KIDL++ E + + + M+ Y Y V S Q G+ Sbjct: 106 LLDKFLLILQQHKLDVILVFSKIDLIEKEELEEIQQNMNYYFPF-YTCYYVDSKQQIGIG 164 Query: 200 PLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFP 259 L+ +I++ AGQ+GVGKS+LL AL+ + T +IS++ G G+HTT A+LY Sbjct: 165 VLKNIFEQKITVLAGQTGVGKSTLLKALIP-DANLKTQEISESLGRGKHTTKNAQLY-LF 222 Query: 260 HGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKY-RDCKHDTDPGCAIREAVEE 318 + G + D+PG + L + + + +F Y+ C + +C H + C ++EA+ + Sbjct: 223 NNGFIADTPGFSKLDLGGFSYQNLKNFYPDFLKYVDNCYFGTNCLHLQETQCGVKEALTQ 282 Query: 319 GKIAETRFENYHRILESMAQVKT 341 GKI +R+ NY +E + + K Sbjct: 283 GKIIPSRYSNYCYFMEEIKKEKK 305 >UniRef50_Q6KH84 Predicted GTPase protein n=1 Tax=Mycoplasma mobile RepID=Q6KH84_MYCMO Length = 219 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 126/225 (56%), Gaps = 10/225 (4%) Query: 116 VKPIAANIDQIVIVSAI-LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174 +P +N+DQI++V ++ P+ + +D+ L+ E I+P+I+ K DLL + Sbjct: 2 TRPKVSNLDQIILVVSLKEPDFNSYTLDKLLLIVEFKNIQPVIIFTKSDLLSESS----- 56 Query: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEI 234 + ++Y GY+V + S + ++ + + + ++S FAG SGVGK++++N L E Sbjct: 57 KIPNLYEKQGYKVFLTSINDKNSYEKISQIFENKLSAFAGWSGVGKTTIINHLTNNNYE- 115 Query: 235 LTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYL 294 T IS G G+HTT ++ F G +ID+PG F +L+ E++++ F +F + Sbjct: 116 -TQQISKFLGRGKHTTRITQIIPFNKG-WLIDTPGFSIFE-HNLKKEEVSKAFFDFRIFA 172 Query: 295 GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV 339 C++R+C H+ + C +++ V + I ++R++NY RIL + Sbjct: 173 NECEFRNCFHNKEKKCKVKDEVSKNNILQSRYDNYLRILSEVEDE 217 >UniRef50_A2C5M0 Putative ribosome biogenesis GTPase rsgA n=14 Tax=cellular organisms RepID=RSGA_PROM3 Length = 321 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 86/328 (26%), Positives = 138/328 (42%), Gaps = 46/328 (14%) Query: 33 DNLFGEPDEGIVISRFGMHADVESA--------------DGDVHR--CNIRRTIRS---- 72 G+V++ +VE D + R C R + Sbjct: 2 AAAEAPRLAGMVVALQANFLEVELETFNPSSLVSWRRSTDAEPLRLLCTRRTRLDHRGAA 61 Query: 73 LVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAI 132 + GDRV A + + +V V R S + RP + + A ++ Sbjct: 62 VHVGDRVWVE----AIDWQERRAVVGDVEPRQSWINRPPVANVTAVVVA-------LAVK 110 Query: 133 LPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSS 192 P + R+L++ E ++ ++L K DL+ + + +Q+ R GYR + VS Sbjct: 111 QPCFDADQASRFLLSAEQTGVDVHLILTKRDLITSDQLE---QQLVRLRGWGYRPMAVSV 167 Query: 193 HTQDGLKPLEEALTG-RISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTT 251 T +GL L+ L+ R+++F G SGVGK+SLLN LL Q + +S G+HTT Sbjct: 168 QTGEGLGALKNKLSSTRLAVFCGPSGVGKTSLLNQLLP-QLSLRVGAVSGRLQRGRHTTR 226 Query: 252 AARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL--CKYRDCKHDTDPG 309 L+ G V D+PG L +P ++ F EF + C++RDC H +PG Sbjct: 227 HVELFRLCEGSLVADTPGFNRPELP-ADPRKLAVLFPEFDGQIEDYPCRFRDCFHRDEPG 285 Query: 310 CAIREAVEEGKIAETRFENYHRILESMA 337 C + ++ E R+ Y R LE M Sbjct: 286 CGVDKSWE-------RYPIYKRFLEEME 306 >UniRef50_A9RXD5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RXD5_PHYPA Length = 385 Score = 214 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 76/304 (25%), Positives = 144/304 (47%), Gaps = 53/304 (17%) Query: 61 VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA 120 V R +++ R ++ GD+V+ A + ++ +G+VE V +R S + +P Sbjct: 28 VVRAVLKKIKRRVLVGDKVLV----SAIDWMDRRGMVEDVLDRRSEIA--------EPPI 75 Query: 121 ANIDQIVIVSAIL-PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDI 179 AN++ ++++ A P+L + R+LV E+ I ++LNK DL+ + + E++ Sbjct: 76 ANVEHLLVLFAFDRPKLEPIALSRFLVEAESTGIPFTLILNKADLVPQQELLDWKEKIA- 134 Query: 180 YRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ-------- 231 GY+ ++ S ++ G+ P+ E L + ++ G SGVGKSSL+NAL + Sbjct: 135 --GWGYKPVICSVRSRSGVAPVMEILRQKTAVVVGPSGVGKSSLINALRDVSGIEMWREK 192 Query: 232 ----------------KEILTNDISDNSGLGQHTTTAARLYHFP-HGGDVIDSPGVREFG 274 +++ +++S SG G+HTT L P GG + D+PG + Sbjct: 193 EAMQRLETVRDEHETFEKLQVSEVSLRSGKGRHTTRHVSLLRLPGDGGLLADTPGFSQPS 252 Query: 275 LWHLEPEQITQGFVEFHDYL-----GLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENY 329 L + ++ F E + + G C + +C H +P CA+ + + R+ +Y Sbjct: 253 LNLVTSGELGDLFPEVREKIASSPEGGCLFANCLHAGEPSCAVGKDWD-------RYSHY 305 Query: 330 HRIL 333 +L Sbjct: 306 LGLL 309 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.141 0.412 Lambda K H 0.267 0.0431 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,252,167,286 Number of Sequences: 3077464 Number of extensions: 102984927 Number of successful extensions: 471079 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 986 Number of HSP's successfully gapped in prelim test: 3173 Number of HSP's that attempted gapping in prelim test: 461708 Number of HSP's gapped (non-prelim): 6801 length of query: 350 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 221 effective length of database: 643,403,500 effective search space: 142192173500 effective search space used: 142192173500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 94 (40.7 bits)