40 c3md0A_ Probab=98.95   E-value=3.3e-11  Score=86.12  Aligned_columns=175  Identities=15%

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE---EEEEEECCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCC
Q ss_conf             9999999999998863346610103687863---6998608857898499978844540113674316479997468766
Q batch____        12 RRVNANHQRRLKTSKEKPDYDDNLFGEPDEG---IVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAA   88 (350)
Q Consensus        12 ~ri~~~~~~~~~~~~~~~~~~~~l~G~~n~G---lV~a~~g~~~~V~~~~g~~~~~~~R~~~~~~~vGD~V~~~~~~~~~   88 (350)
                      .+....+..++........+.++++|+||+|   ++|++.|....+....|.+......-            +...+...
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~Iai~G~pnaGKSSLln~L~~~~~~~~~~~~~t~~~~~~~------------~~~~~~~v   98 (301)
T c3md0A_          31 HREQAQQLLLRLLPDSGNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVRMARL------------AVHPNAYI   98 (301)
T ss_dssp             HHHHHHHHHHHHGGGCCCSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCHHH------------HTSTTEEE
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEE------------EEECCEEE
T ss_conf             899999999875332289728999738988788999999987641457675167710013------------60398789


Q ss_pred             CCCCCCEE---------EEECCCCCCEEECCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             55566168---------861488662001165210144453028989999418788898999999999984899699999
Q batch____        89 EGVNVKGI---------VEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVL  159 (350)
Q Consensus        89 ~~~d~~G~---------I~~i~pR~~~L~R~~~~~~~q~iaANiD~vliV~~~~p~~~~~~idr~L~~~~~~~i~~iiVl  159 (350)
                      ...|+.|+         +.+-......+.........-...+  |.+++|+++........+.     +...+.|.++|+
T Consensus        99 ~~~dt~G~~~~~~~~~~~~d~~~~d~~~~e~~~~~~~~~~~~--d~~~~v~d~~~~~~~~~~~-----~~~~~~~~i~vi  171 (301)
T c3md0A_          99 RPSTLGGVTRATRETVVLLEAAGFDVILIETGQSEVAVANMV--DTFVLLTLARTGDQLQGIK-----KGVLELADIVVV  171 (301)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHHTTCCEEEEECCCHHHHHHTTC--SEEEEEEESCTTTTTTTCC-----TTGGGGCSEEEE
T ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC--CEEEEEECCCCCHHHHHHH-----HHHCCCCEEEEE
T ss_conf             996023411003678999642386521454368999986138--8557962557852678754-----432367708985


Q ss_pred             ECCCCCCHHHHHHHHHHHHHHHHC--------CCCEEEEECCCCCCHHHHHHHC
Q ss_conf             851049988999999999877626--------9959998489867988999970
Q batch____       160 NKIDLLDDEGMAFVNEQMDIYRNI--------GYRVLMVSSHTQDGLKPLEEAL  205 (350)
Q Consensus       160 NK~DL~~~~~~~~~~~~l~~y~~~--------g~~v~~vSa~~g~Gl~~L~~~L  205 (350)
                      ||+|+.+..........+......        ..+++++|+.+|.|+++|.+.|
T Consensus       172 NK~D~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~Sa~~g~gi~~L~~~l  225 (301)
T c3md0A_         172 NKADGEHHKEARLAARELSAAIRLIYPREALWRPPVLTMSAVEGRGLAELWDTV  225 (301)
T ss_dssp             ECCCGGGHHHHHHHHHHHHHHHHHHSTTCSSCCCCEEECBTTTTBSHHHHHHHH
T ss_pred             ECCCCCCCHHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf             154678800132589999999753010002589838997278879989999999