Phyre 2 alignment of P24177 with c2hdiA_

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Job Description | P24177
Confidence | 13.75% | Date | Wed Jan 25 15:20:44 GMT 2012
Rank | 75 | Aligned Residues | 40
% Identity | 28% | Template | c2hdiA_
PDB info | PDB header:protein transport,antimicrobial protein | Chain: A: PDB Molecule:colicin i receptor; | PDBTitle: crystal structure of the colicin i receptor cir from e.coli in complex2 with receptor binding domain of colicin ia.
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  | 180 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | K | Q | D | I | A | D | Y | V | A | S | N | I | Q | D | P | L | S | R | V | N | G | V | G | . | . | . | . | . | . | . | . | . | D | I | D | A | Y | G | . | S | Q | Y | S | M | R | I | W | L | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | Q | E | D | L | Q | R | K | P | V | Q | N | L | K | D | V | L | K | E | V | P | G | V | Q | L | T | N | E | G | D | N | R | K | G | V | S | I | R | G | L | D | S | S | Y | T | L | I | L | V | D
Template Known Secondary structure |  |  |  |  |  |  |  | S | S |  |  | S | S | T |  |  |  |  | T | T | S | T | T |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  | T | T | B |  | G | G | G |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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