28/01/2012 01:40:09 : INFO  : Run start: Sat Jan 28 01:40:08 GMT 2012
28/01/2012 01:40:11 : INFO  : Initialised job
28/01/2012 01:40:11 : INFO  : Renaming log file 'phyre2_20120128_014008.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/8137cd87d7d9248b/phyre_20120128_014008.log'
28/01/2012 01:40:12 : INFO  : Initialised job:
Sequence
>batch____
MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENT
VTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQ
AVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPLSRVNGVGDIDAYGS
QYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL
QTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEM
ATAELVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQ
NFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENVERIM
SEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL
SVLVAMILTPALCATLLKPLKKGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRW
IVIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTH
EKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSKTGTSFAIIERATKAFNQIKEA
RVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLD
DSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRML
PDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMD
IMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVM
LVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEA
TLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVP
LFFVLVRRRFPLKPRPE

28/01/2012 01:40:12 : INFO  : Checked sequence
28/01/2012 01:40:13 : INFO  : Finding homologues with PSI-BLAST
28/01/2012 01:40:14 : INFO  : PSI-BLAST 3 iterations
28/01/2012 01:46:23 : INFO  : PSI-BLAST 5 iterations
28/01/2012 01:53:38 : INFO  : Finished PSI-BLAST
28/01/2012 01:53:39 : INFO  : Running Buildali to generate a3m file
28/01/2012 02:59:21 : INFO  : Converting to HMM
28/01/2012 03:00:04 : INFO  : Calibrating HMM
28/01/2012 03:00:39 : INFO  : Searching HMM database
28/01/2012 03:23:39 : INFO  : Finished buildali
28/01/2012 03:23:40 : INFO  : Predicting secondary structure
28/01/2012 03:23:44 : INFO  : Predicted secondary structure (PSI-Pred)
28/01/2012 03:23:45 : INFO  : Predicting Disordered regions
28/01/2012 03:23:47 : INFO  : Predicted Disorder (Disopred)
28/01/2012 03:23:48 : INFO  : Running memsat_svm check
28/01/2012 03:31:05 : INFO  : Running memsat_svm full
28/01/2012 03:40:13 : INFO  : Predicted Transmembrane (memsat_svm) ID '8137cd87d7d9248b'
28/01/2012 03:40:16 : INFO  : Initialising fold library search
28/01/2012 03:40:18 : INFO  : Initialised search input
28/01/2012 03:40:20 : INFO  : Building Ensemble models
28/01/2012 03:40:22 : INFO  : Building hh.c1oy8A_.model.1.pdb
28/01/2012 03:40:34 : INFO  : Building c1oy8A_.1.pdb
28/01/2012 03:40:47 : INFO  : Building c3k07A_.2.pdb
28/01/2012 03:40:58 : INFO  : Building c3aqpB_.3.pdb
28/01/2012 03:41:09 : INFO  : Building d1iwga8.4.pdb
28/01/2012 03:41:22 : INFO  : Building d1iwga7.5.pdb
28/01/2012 03:41:35 : INFO  : Building d1iwga1.6.pdb
28/01/2012 03:41:45 : INFO  : Building d1iwga5.7.pdb
28/01/2012 03:41:56 : INFO  : Building d1iwga2.8.pdb
28/01/2012 03:42:09 : INFO  : Building d1iwga6.9.pdb
28/01/2012 03:42:20 : INFO  : Building d1iwga3.10.pdb
28/01/2012 03:42:31 : INFO  : Building d1iwga4.11.pdb
28/01/2012 03:42:43 : INFO  : Building c2ropA_.12.pdb
28/01/2012 03:42:54 : INFO  : Building c2ew9A_.13.pdb
28/01/2012 03:43:05 : INFO  : Building c2rmlA_.14.pdb
28/01/2012 03:43:15 : INFO  : Building d1s6ua_.15.pdb
28/01/2012 03:43:26 : INFO  : Building d2aw0a_.16.pdb
28/01/2012 03:43:37 : INFO  : Building d1cpza_.17.pdb
28/01/2012 03:43:48 : INFO  : Building d2qifa1.18.pdb
28/01/2012 03:44:00 : INFO  : Building c3dxsX_.19.pdb
28/01/2012 03:44:10 : INFO  : Building d1kvja_.20.pdb
28/01/2012 03:44:42 : INFO  : Finished HH model building
28/01/2012 03:44:43 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
28/01/2012 03:45:31 : INFO  : html domain output complete ID '8137cd87d7d9248b'
28/01/2012 05:41:59 : INFO  : Run end  : Sat Jan 28 05:41:58 GMT 2012
