BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (532 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobac... 1089 0.0 UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2... 414 e-114 UniRef50_D0Z7I3 EAL domain protein n=1 Tax=Edwardsiella tarda EI... 353 8e-96 UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0... 247 6e-64 UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=... 235 4e-60 UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=R... 229 2e-58 UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria R... 228 3e-58 UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erw... 224 5e-57 UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromob... 223 2e-56 UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9X... 223 2e-56 UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobac... 219 2e-55 UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2V... 218 6e-55 UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6... 216 2e-54 UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI 215 3e-54 UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteo... 212 3e-53 UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA 211 8e-53 UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 T... 207 8e-52 UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio ... 207 8e-52 UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT... 207 1e-51 UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomon... 204 6e-51 UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae Rep... 204 6e-51 UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domai... 196 2e-48 UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya da... 196 2e-48 UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila ... 196 2e-48 UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae Re... 192 3e-47 UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU 192 4e-47 UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya Re... 189 3e-46 UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae Re... 187 8e-46 UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholde... 185 3e-45 UniRef50_Q1Z832 Putative uncharacterized protein n=1 Tax=Photoba... 185 3e-45 UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domai... 182 2e-44 UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter ro... 182 3e-44 UniRef50_C9NZP3 Rtn protein n=1 Tax=Vibrio coralliilyticus ATCC ... 180 1e-43 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 179 3e-43 UniRef50_A5VAG1 EAL domain protein n=2 Tax=Alphaproteobacteria R... 179 3e-43 UniRef50_Q7BQS9 Sea19 n=1 Tax=Serratia entomophila RepID=Q7BQS9_... 177 6e-43 UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH 172 4e-41 UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 171 8e-41 UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xan... 170 1e-40 UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobact... 169 2e-40 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 169 3e-40 UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15... 169 3e-40 UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitrati... 168 4e-40 UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photoba... 168 5e-40 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 168 6e-40 UniRef50_P21514 Cyclic di-GMP phosphodiesterase yahA n=51 Tax=Es... 168 6e-40 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 167 7e-40 UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 167 8e-40 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 167 1e-39 UniRef50_B6R9S7 Response regulator receiver modulated diguanylat... 166 2e-39 UniRef50_A6FCC1 Putative orphan protein; putative conserved doma... 166 2e-39 UniRef50_D0YY24 Putative uncharacterized protein n=1 Tax=Photoba... 166 2e-39 UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 166 3e-39 UniRef50_A6AUF8 Cyclic diguanylate phosphodiesterase (EAL) domai... 165 3e-39 UniRef50_UPI000182647F hypothetical protein EcanA3_13737 n=1 Tax... 164 8e-39 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 9e-39 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 163 1e-38 UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/P... 163 1e-38 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 2e-38 UniRef50_A3WLN6 Putative GGDEF domain membrane associated protei... 162 2e-38 UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Di... 162 2e-38 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 2e-38 UniRef50_A8VT95 Transposase IS3/IS911 family protein n=1 Tax=Bac... 162 3e-38 UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=... 162 4e-38 UniRef50_B1YM22 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ex... 162 4e-38 UniRef50_A1U2T3 Response regulator receiver modulated diguanylat... 161 5e-38 UniRef50_B1KEW5 EAL domain protein n=1 Tax=Shewanella woodyi ATC... 161 6e-38 UniRef50_Q5ZVH1 Rtn protein n=5 Tax=Legionella RepID=Q5ZVH1_LEGPH 160 1e-37 UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 1e-37 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 160 1e-37 UniRef50_A0KF89 EAL domain protein n=1 Tax=Aeromonas hydrophila ... 160 1e-37 UniRef50_C9PIA5 Rtn protein n=1 Tax=Vibrio furnissii CIP 102972 ... 160 1e-37 UniRef50_Q5QW01 Intracellular signaling protein (GAF,PAS,GGDEF,E... 160 2e-37 UniRef50_Q2L0M3 Putative signaling protein (Fragment) n=1 Tax=Bo... 159 2e-37 UniRef50_Q1Z8P6 Putative uncharacterized protein n=1 Tax=Photoba... 159 2e-37 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 2e-37 UniRef50_B6ASC2 GGDEF EAL domain-containing protein n=2 Tax=Lept... 159 2e-37 UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 159 2e-37 UniRef50_C9YG65 Uncharacterized signaling protein PA1727 n=1 Tax... 159 2e-37 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 159 2e-37 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 159 2e-37 UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain prote... 159 2e-37 UniRef50_Q1LPF0 EAL-containing signal transduction protein n=3 T... 159 3e-37 UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=c... 159 3e-37 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 4e-37 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 158 5e-37 UniRef50_B2JUW5 Diguanylate phosphodiesterase n=1 Tax=Burkholder... 158 5e-37 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 5e-37 UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax... 158 6e-37 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 6e-37 UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synecho... 157 7e-37 UniRef50_C7R7Z7 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 8e-37 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 157 1e-36 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 157 1e-36 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 157 1e-36 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 157 1e-36 UniRef50_Q0HUI5 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 1e-36 UniRef50_Q2BQA3 Signaling protein (CHEY,EAL,GGDEF domains) n=1 T... 157 1e-36 UniRef50_UPI0001C377AD response regulator/GGDEF domain/EAL domai... 157 1e-36 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 157 1e-36 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 157 1e-36 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 157 1e-36 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 157 1e-36 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 1e-36 UniRef50_B8EE65 Response regulator receiver modulated diguanylat... 157 1e-36 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 1e-36 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_Q1LCJ1 EAL-containing signal transduction protein n=3 T... 156 2e-36 UniRef50_B6BJN9 Sensory box sensor/ggdef/eal domain protein n=2 ... 156 2e-36 UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 156 2e-36 UniRef50_A0LAI5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 156 2e-36 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 156 2e-36 UniRef50_Q6LJ31 Putative uncharacterized protein n=3 Tax=Vibrion... 155 3e-36 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 155 3e-36 UniRef50_B5VVW5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ar... 155 3e-36 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 155 3e-36 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 3e-36 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 155 3e-36 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 155 3e-36 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 155 4e-36 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_D1RIS6 Cyclic diguanylate phosphodiesterase (EAL) domai... 155 4e-36 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 155 4e-36 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 155 4e-36 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 155 5e-36 UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 5e-36 UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Nep... 155 5e-36 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 155 5e-36 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 155 5e-36 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 155 5e-36 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 155 5e-36 UniRef50_A0JVV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 5e-36 UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 T... 154 6e-36 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 154 6e-36 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 154 6e-36 UniRef50_B0KTQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 6e-36 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 154 6e-36 UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 6e-36 UniRef50_B9Z2J3 Diguanylate phosphodiesterase n=1 Tax=Lutiella n... 154 7e-36 UniRef50_A7K0B3 Rtn protein n=5 Tax=Vibrio RepID=A7K0B3_VIBSE 154 7e-36 UniRef50_P32701 Uncharacterized protein yjcC n=108 Tax=Enterobac... 154 7e-36 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 154 7e-36 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 7e-36 UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya... 154 7e-36 UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 8e-36 UniRef50_B8K4T2 Sensory box protein/ggdef domain/eal domain n=2 ... 154 8e-36 UniRef50_A4XWY6 Diguanylate phosphodiesterase n=1 Tax=Pseudomona... 154 8e-36 UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 8e-36 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 154 1e-35 UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella Rep... 154 1e-35 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 154 1e-35 UniRef50_D1RM65 Sensory box protein/GGDEF domain/EAL domain prot... 154 1e-35 UniRef50_D0WXU5 Putative uncharacterized protein n=1 Tax=Vibrio ... 154 1e-35 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 154 1e-35 UniRef50_C1DB08 Predicted signal transduction protein containing... 153 1e-35 UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acineto... 153 1e-35 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 153 1e-35 UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 1e-35 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 1e-35 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 153 2e-35 UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 T... 153 2e-35 UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 153 2e-35 UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_A5KWC7 PAS:GGDEF n=3 Tax=Gammaproteobacteria RepID=A5KW... 153 2e-35 UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 2e-35 UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacilla... 152 2e-35 UniRef50_A0Z1K1 Hybrid signal transduction histidine kinase and ... 152 2e-35 UniRef50_Q483V3 Sensory box/GGDEF/EAL domain protein n=5 Tax=Alt... 152 2e-35 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 152 3e-35 UniRef50_A5VXC5 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 3e-35 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 152 3e-35 UniRef50_A4TYP2 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 152 3e-35 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 152 3e-35 UniRef50_Q55033 Regulatory components of sensory transduction sy... 152 3e-35 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 152 3e-35 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 3e-35 UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 3e-35 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 3e-35 UniRef50_A5G085 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 152 3e-35 UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 3e-35 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 152 3e-35 UniRef50_Q5E8Q7 GGDEF domain protein n=2 Tax=Vibrio fischeri Rep... 152 4e-35 UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF s... 152 4e-35 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 4e-35 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 4e-35 UniRef50_A1TXU5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 152 4e-35 UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 152 4e-35 UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 4e-35 UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 152 4e-35 UniRef50_A3WP65 Signal transduction protein containing a membran... 152 4e-35 UniRef50_Q73DV7 Sensory box/GGDEF family protein n=76 Tax=Bacill... 152 4e-35 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 4e-35 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 152 4e-35 UniRef50_D0SWS6 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 151 5e-35 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 5e-35 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 5e-35 UniRef50_B2I7U8 EAL domain protein n=12 Tax=Xanthomonadaceae Rep... 151 5e-35 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 5e-35 UniRef50_C5SBB5 Response regulator receiver modulated diguanylat... 151 5e-35 UniRef50_Q0HY75 EAL domain protein n=2 Tax=Shewanella RepID=Q0HY... 151 6e-35 UniRef50_B8GNC0 Signal transduction protein containing a membran... 151 6e-35 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 151 6e-35 UniRef50_B2J301 Response regulator receiver modulated diguanylat... 151 6e-35 UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98B... 151 6e-35 UniRef50_A8V4T8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 151 6e-35 UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 6e-35 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 6e-35 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 6e-35 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 151 7e-35 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 7e-35 UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter... 151 7e-35 UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylat... 151 7e-35 UniRef50_A7K1R0 Rtn protein n=3 Tax=Vibrio RepID=A7K1R0_VIBSE 151 7e-35 UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='N... 151 7e-35 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 151 8e-35 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 151 8e-35 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 8e-35 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 151 8e-35 UniRef50_A0NTQ4 Sensory box/GGDEF family protein n=1 Tax=Labrenz... 150 8e-35 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 150 8e-35 UniRef50_B5VUP3 Diguanylate cyclase/phosphodiesterase n=3 Tax=Os... 150 9e-35 UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 T... 150 9e-35 UniRef50_Q082T6 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 9e-35 UniRef50_A3JAE8 Predicted signal transduction protein containing... 150 9e-35 UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 T... 150 1e-34 UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT 150 1e-34 UniRef50_B1J9N2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ps... 150 1e-34 UniRef50_A3XSN8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 150 1e-34 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 150 1e-34 UniRef50_C6P1V2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Si... 150 1e-34 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 1e-34 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 150 1e-34 UniRef50_A1SBS3 Signal transduction protein containing a membran... 150 1e-34 UniRef50_D0HDR4 Rtn protein n=5 Tax=Vibrio RepID=D0HDR4_VIBMI 150 1e-34 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 150 1e-34 UniRef50_B7VQ16 Putative uncharacterized protein n=1 Tax=Vibrio ... 150 1e-34 UniRef50_C8QGW8 Diguanylate cyclase/phosphodiesterase withMHYT s... 150 1e-34 UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL ... 150 1e-34 UniRef50_B4SIM9 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 1e-34 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 1e-34 UniRef50_A9HDK0 Conserved protein n=2 Tax=Gluconacetobacter diaz... 150 1e-34 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 150 1e-34 >UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobacteriaceae RepID=YOAD_ECOLI Length = 532 Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 532/532 (100%), Positives = 532/532 (100%) Query: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV Sbjct: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 Query: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV Sbjct: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 Query: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ 180 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ Sbjct: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ 180 Query: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY 240 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY Sbjct: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY 240 Query: 241 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV Sbjct: 241 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 Query: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA 360 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA Sbjct: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA 360 Query: 361 PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG 420 PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG Sbjct: 361 PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG 420 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE Sbjct: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 Query: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR 532 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR Sbjct: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR 532 >UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2_SERP5 Length = 538 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/512 (43%), Positives = 311/512 (60%), Gaps = 1/512 (0%) Query: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 M Q + YR R ++ L L +L R+ + +Q A V +++ + Sbjct: 1 MLMTQLAVSKYRYYRWLLAGAVGLAILLLSLYTRYYQEIGTIEQNRQVLATRTVAKINDL 60 Query: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 L P + +E +PL+G C LR +AA+ Q +R++ LV+DG +YCSS+FG R Sbjct: 61 LTPAKQQAERSMPLLGSTCEEVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLF 120 Query: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNA-GVMEMINIDLLTAMLLEP 179 IL + L L ++ KG P LI WTPA +N+ GV+ + NI+LL LLEP Sbjct: 121 STILPSVANDGAKLVLRPSLSVAKGVPTLIMWTPAQPDNNSNGVLHVFNIELLANFLLEP 180 Query: 180 QLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWH 239 Q P L V L YG + + Y S R+PF+I++ GP A+ LA Sbjct: 181 QEPYAQRVVLNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALA 240 Query: 240 YLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIG 299 LP +PL++L+SLL Y+ +L TA RMS S I +++ EF ++CQP++NA + +C+G Sbjct: 241 ALPRHIPLSLLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVG 300 Query: 300 VEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINV 359 VE+LLRW N RQGWISPDVFIP+AE+H LI+ LTRY+M+ + +FP F++ INV Sbjct: 301 VEMLLRWKNKRQGWISPDVFIPLAEQHGLIIALTRYLMSTVVENLQLFPPRPSFYISINV 360 Query: 360 APSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDF 419 A HF +I D+ + W AHP+ L+LE+TER AL ++ Y + L + LAIDDF Sbjct: 361 AAEHFNGVTIIDDIRRLWLPAHPMPSLMLELTERTALSEIQYEQIKTLKEMGIMLAIDDF 420 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GTG+SS S+L+ L PDVLKID+ FTAAIG+DA+N+TVTD II L RL ++LVAEGVET Sbjct: 421 GTGHSSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETA 480 Query: 480 EQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 EQA YLR V+ LQG+ +A+PMP+ FP WL Sbjct: 481 EQADYLRSRDVNALQGFYFAKPMPINVFPLWL 512 >UniRef50_D0Z7I3 EAL domain protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z7I3_EDWTE Length = 588 Score = 353 bits (907), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 206/524 (39%), Positives = 307/524 (58%), Gaps = 9/524 (1%) Query: 8 IKTYRRNR-MIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQA 66 +K YR R ++ TI ALV + S L+ R+ + QQ A A+ +L+++L + Sbjct: 55 MKRYRLYRALLAITIGALVCIIS-LASRYQQELTTVQQMQRNAATIAITQLERILSRAET 113 Query: 67 GSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAE 126 S+ + + C L A L+T+R++ LV+DG + CS++ + I E Sbjct: 114 VSKNNIGWVNQRCEEISPHLTNMAIHLETIRAVLLVKDGIVTCSNLINQPIKSLRAIYPE 173 Query: 127 LPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISS 186 + + + L L R L +GSP+L+ W P + +G++ + NI L+A +L P+ P + Sbjct: 174 MLSAKDTLVLRAARLLNRGSPILLFWRPDQANPTSGMVYIFNIATLSAFILAPRPPYVDY 233 Query: 187 ASLTVDKRHLLYGNGLVDSLPQPEDNEN---YQVSSQRFPFTINVNGPGATALAWHYLPT 243 +L V L + + V + + E ++ S R+PF+I++ P A LA LP Sbjct: 234 MALNVAGHTLRFNDMRVRAPTDAAEAETPPRLELRSSRYPFSISLFSPAARDLALQRLPR 293 Query: 244 QLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEIL 303 +PLA+LL LL + +LA+A RMS + I + + + L+CQP+++ S +C GVEIL Sbjct: 294 HIPLALLLFLLASILTYLASANRMSLAYPIAQAIRRRQLTLYCQPIIHTESGRCEGVEIL 353 Query: 304 LRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSH 363 LRW NPR GW SP++FIP+AE++ LIVPLTRY++ QRH FP F+ INVA H Sbjct: 354 LRWYNPRHGWTSPEIFIPLAEQNGLIVPLTRYLLEALAAQRHHFPHDRDFYFSINVAAEH 413 Query: 364 FRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFGTGN 423 F +G L D+ W P Q+L+LE+TER L DY L + LA+DDFGTG+ Sbjct: 414 FAQGKLALDIQNLWLRHRPQQRLMLELTERTRLPSQDYPQLHILREMGLSLALDDFGTGH 473 Query: 424 SSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAK 483 SS S+L+ L+P++LKID++F A IGSDA+N+ V D++I L ++L + LV EGVE +QA Sbjct: 474 SSLSYLQDLQPEMLKIDRAFCATIGSDAINARVLDLMIDLARQLRLRLVMEGVEQTQQAD 533 Query: 484 YLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITP 527 YLR+ V+ +QGYL+A+PMPLRDFP W A Q R G TP Sbjct: 534 YLRQRQVYAMQGYLFARPMPLRDFPGWHAHYQ----RQCGDSTP 573 >UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0KNV8_AERHH Length = 510 Score = 247 bits (631), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 162/470 (34%), Positives = 255/470 (54%), Gaps = 21/470 (4%) Query: 52 HAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSS 111 HA E L++ L + ++ +G PC LR Q A + VR++ L + +YCSS Sbjct: 51 HAREMLERTLDHAHQAAAMVQGSVGRPCEEVVQGLRDQVATVPDVRTVNLAKGEVVYCSS 110 Query: 112 IFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDL 171 ++G P LA+ Q L L + G P+++ P S ++ ID Sbjct: 111 LYGPYQGPFK--LADYANGQ--LDLMRGNPVTPGRPLVVYRQPVGEYSV-----LVGIDG 161 Query: 172 LTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTI--NVN 229 + L + S +L + + +L + D +P P + + +S ++PF + +++ Sbjct: 162 YYLHNILDMLSRNSPLTLVIGAQSMLADGQIHDEVP-PVALGSLEQTSGKYPFRVVTDLS 220 Query: 230 GPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPL 289 + W+Y L + LL LL G + + S S+E+ L Q EF + QP+ Sbjct: 221 HDEYGSHIWNYSRASLIIYPLLGLLAGCLVYWLAGRSTSPSQELRRALDQREFIPYLQPV 280 Query: 290 LNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQR---HV 346 + G E+L+RW +PRQG ISPD FIP+AE+ LIVP+TR +M E +R++ V Sbjct: 281 VTGDDAHWSGCEVLMRWQHPRQGLISPDRFIPLAEDSGLIVPMTRLLM-EQVREQFAGRV 339 Query: 347 FPMSSQFHVGINVAPSHFRRGVLIKDLNQY--WFSAHPIQQLILEITERDALL--DVDYR 402 + FH G N++ SH + L++D + F +PI+ L+LE+TER+ ++ + R Sbjct: 340 HSLPRGFHFGFNISASHCKDMSLLEDCRDFINAFRENPIK-LVLELTERELIVADETTDR 398 Query: 403 IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIA 462 + ELH+ V +AIDDFGTG+SS ++L+ + D LKID+SF IGSDA++S + + +I Sbjct: 399 LFAELHQLGVFIAIDDFGTGHSSLTYLQQFQVDFLKIDQSFVGMIGSDALSSHIVENVID 458 Query: 463 LGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512 L RL + LVAEGVE + QA YLR V+ LQGYLY +PMP+++F LA Sbjct: 459 LATRLGLLLVAEGVENEVQAAYLRARQVNFLQGYLYGRPMPMKEFAGLLA 508 >UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=C6DJC0_PECCP Length = 535 Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 146/447 (32%), Positives = 231/447 (51%), Gaps = 16/447 (3%) Query: 76 GLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLL- 134 G PC++ L++ + R+IG++ + +YCSS FG P+ ++ + P P+ Sbjct: 72 GQPCNIIGDELQRLGSVFSYFRAIGVIHNTNVYCSSTFGSTLTPISRVIQQ-PLPETYSE 130 Query: 135 RLTIDRAL---IKGSPVLI-QWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLT 190 R ++ A +K P LI P G G M++ L +++ + +L Sbjct: 131 RWSLSIAGSDNVKERPALIFVQMPLTGD---GAYAMVDAQYLIDLMIAISKIRGYQLTLK 187 Query: 191 VDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALA-W-HYLPTQLPLA 248 +D H + + ++ S RFP T+N+ P + +A W T LPLA Sbjct: 188 MDNGHPIQTGPAITPRIGLFSTSALEIRSSRFPITLNITAPASQEIANWKQAFFTFLPLA 247 Query: 249 VLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNN 308 ++LSLL W ++ F EI G+A EF ++ QP+ +A SQ C GVE LLRW Sbjct: 248 IILSLLFTTAIWYWQKRKLLFRDEIRKGIANGEFSVYYQPIYDAESQTCTGVETLLRWRR 307 Query: 309 PRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGV 368 WI PD+FI AE +I+P+TR++ + + FH+G+NVA H Sbjct: 308 SNGKWIRPDIFISAAEAESMIIPITRHLFDLVASDIASWQVKPGFHLGLNVAAEHLHHPS 367 Query: 369 LIKDLNQYW--FSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNS 424 + D++++ ++H + + LE+TER+ + + I R +L + IDDFGTG+ Sbjct: 368 FVSDVHRFAEKVASHSLS-ISLELTERNLISNGPEIIQRLHQLREDGFMITIDDFGTGHC 426 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 S S+L+ D LKID+ F +AI S + + D II L R+N++ VAEGVET++Q Y Sbjct: 427 SLSYLQNFPLDCLKIDQGFVSAISSPDEEAPILDAIINLSHRINLQSVAEGVETKQQLMY 486 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPKWL 511 L++HGV +QG+LYA+PM F WL Sbjct: 487 LQQHGVKYIQGFLYAKPMDNESFLVWL 513 >UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=RTN_ECOLI Length = 518 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 150/520 (28%), Positives = 260/520 (50%), Gaps = 24/520 (4%) Query: 11 YRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV 70 + R ++ C + ++ ++F+ + ++ + + LD L++ ++ Sbjct: 8 FGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR 67 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 L PL C A+ L +AA VR+ LV+D +CSS G ++P+ +++ L Sbjct: 68 LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALD-- 125 Query: 131 QPLLRLTIDRALIKGSPV------LIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQI 184 + +D A++ G+P+ ++ W N+GV +N++L ++ + Sbjct: 126 ---INKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDY 182 Query: 185 SSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQ 244 +L + L + + ++ + D + P T+ + T W+ + Sbjct: 183 DGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT---WNDVWYA 239 Query: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 L + +VG + + + RM REI + + +F + QP+++ ++ + G+E+LL Sbjct: 240 FLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVA 360 RW +P G I PD FI AE +IVPLT+++ R V P+ +F GIN+A Sbjct: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKF--GINIA 357 Query: 361 PSHFRRGVLIKDLNQYWFS--AHPIQQLILEITERDALLDVD-YRIARELHRKNVKLAID 417 P H D+ + S AH Q ++LEITERD L + + ++ LH V++AID Sbjct: 358 PDHLHSESFKADIQKLLTSLPAHHFQ-IVLEITERDMLKEQEATQLFAWLHSVGVEIAID 416 Query: 418 DFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVE 477 DFGTG+S+ +LE D LKID+ F AIG++ + S V D ++ L +RLN+ VAEGVE Sbjct: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 Query: 478 TQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 T EQA++L GV+ +QGY ++P+PL DF +WL P Sbjct: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 >UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria RepID=A4SI84_AERS4 Length = 527 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 171/488 (35%), Positives = 256/488 (52%), Gaps = 32/488 (6%) Query: 50 ANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYC 109 A+ A+ ++ +L + + +LPL+G PC + LR+Q A + VRS+ LV++G LYC Sbjct: 49 AHKAMTLMENMLDHAERANRQVLPLVGAPCDEINFQLREQVALVPFVRSVNLVKEGMLYC 108 Query: 110 SSIFGYRNVPVVDILAELPAPQPLL-RLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMIN 168 +S+FG +V VD + A + LL R RA P+LI + NA + I+ Sbjct: 109 TSLFG--SVREVDDASPYIARKLLLMRGNQVRA---NHPLLI--VRSEQGRNAA-LSAID 160 Query: 169 IDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINV 228 + L+ ML + + V +D P +++S +PF+I+ Sbjct: 161 GEYLSVMLTLSH--HAGNLFMRVGSTWFDEAGHYLDKAPDLHALARTELTSPHYPFSIHA 218 Query: 229 NGPGATALA-WHYLPTQ----LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFE 283 G LA WH L L L LSL + W S E+ L EFE Sbjct: 219 ---GYVTLAYWHSLWDHKSLILSLLCGLSLAFALLVWWLLGRPGSPVGELRRALRAKEFE 275 Query: 284 LFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAET--I 341 + QPL+ + +GVE+L+RW +P G I PD+FIP AEE LIVP+T +M + + Sbjct: 276 PYLQPLVTTSDTRLMGVEVLMRWQHPNSGLIRPDLFIPQAEESGLIVPMTTLIMKKVAQV 335 Query: 342 RQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVD 400 R + FH+ N++ +H R L+++ + P + L+LE+TER+ LL VD Sbjct: 336 LSREQARLPDGFHISFNISAAHCRDLALLQECRTFLAQFAPGKIVLVLELTERE-LLVVD 394 Query: 401 ---YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVT 457 + R+L + VKLAIDDFGTG+SS +L+ D LKID+SF IG+++++ + Sbjct: 395 PNTLSLFRQLDQMGVKLAIDDFGTGHSSLFYLQQFHVDYLKIDQSFIGRIGTESLSEHIV 454 Query: 458 DIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLR----DFPKW--L 511 +I LG RL + L+AEGVE++ QA YLR GV +QGYL+ +PMPL+ D P+ L Sbjct: 455 ANVIDLGARLGLLLIAEGVESELQAAYLRAKGVDYMQGYLFGRPMPLQHFCDDLPQGDAL 514 Query: 512 AGSQPPPA 519 AGS P A Sbjct: 515 AGSLPELA 522 >UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erwinia tasmaniensis RepID=B2VJL5_ERWT9 Length = 523 Score = 224 bits (572), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 158/460 (34%), Positives = 240/460 (52%), Gaps = 34/460 (7%) Query: 78 PCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAE-LPAP-QPLLR 135 PC L+K A RS+GL QD T+YCSS FG PV ++ LPAP Q Sbjct: 73 PCKDIRSQLQKLGALNPYFRSVGLTQDNTVYCSSAFGATRGPVAGMIRHALPAPGQSWWT 132 Query: 136 LTIDRAL-IKGSPVLI--QWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVD 192 L++ ++ P +I + TP S A V IDL+ A L+ + Sbjct: 133 LSLAGTFGVQDRPAVIFMRQTPGKTGSYAVVDGQYLIDLMRATGLK--------LGYHIT 184 Query: 193 KRHLLYGNG--LVDSLPQPEDNENYQV-----SSQRFPFTINVNGPGATALA-W-HYLPT 243 R +G G + ++ P N++ S +P I+++ P L W L T Sbjct: 185 MR---FGGGYQIANAAPLNPQQANWKTRTFNSGSSHYPIAISISAPRTETLQNWRQVLLT 241 Query: 244 QLPLAVLLSLLVGYI--AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 +P+AV+LS+L + +WL R S+ E+ G+A EF + QP+ N + Q GVE Sbjct: 242 FMPMAVILSVLFVAVTNSWLRR--RSSYRDELRRGMAFGEFSVHYQPVCNLVNGQLAGVE 299 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAP 361 L+RW W+ PD+FI AE +IV LTR+++ + + + + FH+GINVA Sbjct: 300 ALMRWQRSDGSWVRPDIFIAAAEAEGMIVQLTRHLLQLIAKDCASWKVPAGFHIGINVAA 359 Query: 362 SHFRRGVLIKDLNQYWFS-AHPIQQLILEITERDALLDVD---YRIARELHRKNVKLAID 417 H + +KD+ + + AH + + LE+TER + + D +R+A EL + +++AID Sbjct: 360 DHLQHEDFVKDIRGFSQNIAHLLPTITLELTERSLISEGDLVAHRLA-ELRSEGIRVAID 418 Query: 418 DFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVE 477 DFGTG+ S ++L+T D LKIDKSF AI S + + D II L RL +++VAEG+E Sbjct: 419 DFGTGHCSLTYLQTFPLDYLKIDKSFVNAIESADGETPILDTIIQLAHRLALQVVAEGIE 478 Query: 478 TQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 T Q +YL+ HGV +QG+ YA+P+ W+ + PP Sbjct: 479 TPLQMEYLKNHGVVFIQGFYYARPLSSAALMVWIEQNPPP 518 >UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1U8_CHRVO Length = 513 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 166/492 (33%), Positives = 243/492 (49%), Gaps = 27/492 (5%) Query: 27 LASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPL 86 A+T +R V Q + +E +D +L + VLLPL G PC A PL Sbjct: 26 FAATAPALLWQERQDLSASVRQQLDQGLELVDGILDQADEAARVLLPLAGGPCDKAVYPL 85 Query: 87 RKQAAKLQTVRSIGLVQDGTLYCSSIFGYRN--VPVVDILAELPAPQPLLRLTIDRALIK 144 R+Q A VRS L+ T+YCSS+ G + +P D + Q ++L A+ Sbjct: 86 RRQVAVAPFVRSAVLLDGDTVYCSSLSGSTSWAMPARDFV------QGRMQLLSGNAVTP 139 Query: 145 GSPVLIQWTPAAGSSNAGVME--MINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGL 202 P+L G + ++ + + L A P Q+ L + G G Sbjct: 140 NVPLLYYRLHRGGDAAVTAVDGRYLQLALQDASDTIPVFLQVGEHWLGPRRN----GAGQ 195 Query: 203 VDSLPQPEDNENYQVSSQRFPFTINVN---GPGATALAWHYLPTQLPLAVLLSLLVGYIA 259 +L Q + S R+PFT+ N P L H+ P + L +L L + Sbjct: 196 APALGQVAELRR----SSRYPFTVRANYDLPPWHRQLWSHHAPLTVILLLLGLLAGATLY 251 Query: 260 WLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVF 319 WL SF+ E+ LA EFE + QP++ G E+L+RW +PR+G I PD+F Sbjct: 252 WL-LGRPASFTGELRRALANDEFEGYLQPIVKPGLPDWRGAEVLMRWRHPREGLIRPDLF 310 Query: 320 IPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQY-WF 378 IP AEE LIV +TR +M I + + FH+G+N++ +H + G L D ++ Sbjct: 311 IPRAEESGLIVEMTRRMMDAVIAKVGRLSLPQDFHLGVNISRAHLQEGSLYGDCRRWAGL 370 Query: 379 SAHPIQQLILEITERDALLDVDYRIA---RELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A L LE+TER+ ++++ + R L VK+A+DDFGTG+SS +L+ L D Sbjct: 371 LAESGAVLTLELTERE-MVEITPEVEALFRSLDALGVKIALDDFGTGHSSLVYLQQLTVD 429 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+ F A IGSD ++ + D + L +L +E VAEGVET EQ YL R GV LQG Sbjct: 430 GLKIDQGFVAGIGSDGLSGHIVDSVAELAAKLGLETVAEGVETAEQFDYLSRLGVGWLQG 489 Query: 496 YLYAQPMPLRDF 507 + A+PMPL +F Sbjct: 490 FYIARPMPLDEF 501 >UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9XWJ5_CROTZ Length = 520 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 162/501 (32%), Positives = 256/501 (51%), Gaps = 33/501 (6%) Query: 27 LASTLSVRFISQRNLNQQRVVQF---ANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAH 83 LA TL + ++ L+QQR Q+ A L+ L+A ++ L PL C Sbjct: 26 LALTLMITLAARGWLHQQRENQYDMLARDIHHYLNTYFAQLKASADALQPLTLAECGAVS 85 Query: 84 LPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALI 143 L +AA VR+ L++DG YCSS G ++P+ D++ ++ R T+D ++I Sbjct: 86 AELTSRAAFNVNVRAFLLIRDGVAYCSSATGKLHLPLRDLVPDIDT-----RKTVDISII 140 Query: 144 KGSPVL------IQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLL 197 G+P++ + W G++ +N++L ++ + ++ +L R L Sbjct: 141 PGTPMMPDKPSIVMWFGNPLMEGRGIVTTLNVNLTPYLIYTARQNDLNGLALVAKDRALT 200 Query: 198 YGNGLV---DSLP-QPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSL 253 +G V D LP +P +E S Q +P + + G A H L +L Sbjct: 201 TFSGKVMTPDELPAEPLRSE----SVQGYPLKLYLYGDTMPAEDRHLALLLGLLIGVLGG 256 Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + I A R REI + +++F + QP+++A ++Q GVE L+RW +P G Sbjct: 257 ALTVILL---ALRARSGREILSAIKRNQFFVVYQPVVDAATRQIRGVEALMRWEHPSAGM 313 Query: 314 ISPDVFIPIAEEHHLIVPLTRY----VMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVL 369 I PD FI AE LIVPLT + + + R + P ++ +GIN+AP H Sbjct: 314 IPPDAFISFAEAQGLIVPLTHHLFKLIAQDVPRLQQSLPPGAK--LGINIAPGHLHSEQF 371 Query: 370 IKDLNQYWFSAHPIQ-QLILEITERDALLDVD-YRIARELHRKNVKLAIDDFGTGNSSFS 427 D+ + S P QL+ EITERD + + + + LH + ++A+DDFGTG+S+ Sbjct: 372 KADIQKLHASLPPDYFQLVFEITERDMIREEEAMDLFTWLHEQGHEIAVDDFGTGHSALI 431 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +LE D LKID+ F AIG++ + S V D +I+L +RLN+ VAEGVETQEQAK+L Sbjct: 432 YLERFTLDYLKIDRGFVNAIGTETITSPVLDAVISLAKRLNMVTVAEGVETQEQAKWLTV 491 Query: 488 HGVHILQGYLYAQPMPLRDFP 508 GV+ LQGY +++P+ D P Sbjct: 492 RGVNFLQGYYFSRPVRAADLP 512 >UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobacteriaceae RepID=A8GGV3_SERP5 Length = 528 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 156/527 (29%), Positives = 265/527 (50%), Gaps = 56/527 (10%) Query: 10 TYRRNRMIVCTICALV--TLASTLSVRFISQRNLNQQRVVQ-----FANHAVEELDKVLL 62 ++RR ++ ++ ALV L +++ I+ + QR V+ F L +++ Sbjct: 12 SHRRRSLVKSSVVALVFFILFMGITLSLINHQRTQYQRAVEQRTQKFTLDTFNNLTQIM- 70 Query: 63 PLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVD 122 + L+PL PCS + + QAA VR+ LV++G YCSS G + + + Sbjct: 71 ------QRLMPLTEQPCSSSQPEITYQAAFHAGVRTFMLVKNGFAYCSSATGDMMLALKN 124 Query: 123 ILAELPAPQPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQL 181 I E+ Q L L+L L+ G P W AG + G++ ++I L+ + Sbjct: 125 IYPEIDQRQRLDLKLQQGTPLVPGKPAFAVWLRQAGKEDTGILATLDIGLMPQQMFGTSP 184 Query: 182 PQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYL 241 + ++ + R L + + + Q D + ++S P I T Sbjct: 185 ERAPGIAIILGDRALTSFSPNLMPVNQLPDEKADRISIAGTPMIIMFYNQKLT------- 237 Query: 242 PTQLPLAVL----LSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC 297 P + L +L LSL++G + + R S R + G+ ++EF + QP+ + ++ Sbjct: 238 PNDIRLTLLGSLVLSLMIGVLCYYMLLLRQSPERALMRGIKRNEFFIEYQPVFHTKTGTI 297 Query: 298 IGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY----VMAETIRQRHVFPMSSQF 353 G+E L+RW +P +G I PD+FIP AE LIVPLTR+ + + R P ++ Sbjct: 298 AGLEALIRWQHPIEGRIPPDLFIPYAESEGLIVPLTRHLFRLIAEDAPRLATALPQGAK- 356 Query: 354 HVGINVAPSH-----FRRGV--LIKDLNQYWFSAHPIQQLILEITER------DALLDVD 400 +G+N++PSH F + V L+ L +F+ L+ EITER +AL + D Sbjct: 357 -LGLNISPSHLSAPSFHQDVYELLAQLPGNYFT------LVFEITERGMVEEGNALAEFD 409 Query: 401 YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDII 460 + LH++ +++AIDDFGTG+S+ +L+ D LKID+ F +IG D V + V D + Sbjct: 410 W-----LHKQGIEIAIDDFGTGHSALIYLQRFSMDYLKIDRGFVNSIGRDTVTAPVLDAV 464 Query: 461 IALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 I+L ++L ++ VAEGVET EQ +L+ V+ +QGY Y++P+ + +F Sbjct: 465 ISLAKKLKMQTVAEGVETAEQVSFLQEQDVNFMQGYYYSKPLSIDNF 511 >UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2VIJ7_ERWT9 Length = 539 Score = 218 bits (554), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 151/489 (30%), Positives = 250/489 (51%), Gaps = 30/489 (6%) Query: 54 VEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIF 113 ++EL ++LLPLQA + C L +QAA +R I LV + +CSS Sbjct: 63 MDELKQILLPLQAETFD-------HCDRVRDDLAEQAASTPNIRYILLVNNNAAFCSSAS 115 Query: 114 GYRNVPVVDILAELPAPQPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLL 172 G N + I + + +RL +++G P ++ W + GV+ +N+++ Sbjct: 116 GPMNNEIHQISPFTNDNKAVDIRLVSGAPMLRGKPAMVLWLRNPTTPGNGVLATLNLNMT 175 Query: 173 TAMLLEPQLPQISSASLTVDKRHLLYGNGLV---DSLPQPEDNENYQVSSQRFPFTINVN 229 +LL Q + + ++ + N V D+LP N +++ +P + Sbjct: 176 PYLLLASQQRENTGMAIVTGDTAITTWNEQVINTDALPP---NPLRRIAIPGYPMMLYFY 232 Query: 230 GPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPL 289 G H + + +L+++LV I ++ R+ +EI G+ + EF + QP+ Sbjct: 233 GEILPERDLHII---IMAGLLVAVLVASICYVLFRLRLRPGKEIMQGIRRGEFHVEYQPI 289 Query: 290 LNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRH---- 345 + S G+E L+RW +P +G + D FI AE +LIVPLTR++ A R H Sbjct: 290 IATGSDTAYGLEALMRWVHPTEGRVPADAFISYAEGQNLIVPLTRHLFALIARDAHQLCK 349 Query: 346 VFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQL--ILEITERDALLDVDY-R 402 V P+ ++ +GIN++PSH KD+ Q W + P+ + EITER + + + Sbjct: 350 VVPVGTK--LGINLSPSHLTNPDFRKDVRQ-WLAMMPVDHFEYVFEITERTMVSESNADE 406 Query: 403 IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIA 462 + +H++N+K+AIDDFGTG+S+ +LE D LKID+ F +IG V S V D ++ Sbjct: 407 MFDWIHQQNIKIAIDDFGTGHSALLYLEKFHFDYLKIDRGFVQSIGMKTVTSPVLDTVLT 466 Query: 463 LGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPP---A 519 L + L ++ VAEGVET QA++L GV LQGY Y++P+ ++ K+ +GSQP A Sbjct: 467 LARELKLKTVAEGVETNAQAQWLINRGVTHLQGYFYSRPLGVQQLAKYFSGSQPASEDCA 526 Query: 520 RHNGHITPI 528 +G I P+ Sbjct: 527 DISGSIAPV 535 >UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6AJG8_VIBHA Length = 501 Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 159/519 (30%), Positives = 258/519 (49%), Gaps = 46/519 (8%) Query: 13 RNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEEL-DKVLLPLQAGSEVL 71 R + I+ L+ L S SV N R V+ + + L DK++ S+ Sbjct: 6 RTKRILLAFIVLILLISIGSVGVYQLSKSNLHREVRSSLEVGKSLMDKLVKNADVASQRA 65 Query: 72 LPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQ 131 LP + C A LR + V+ I L +D ++C S+ G R+ V Sbjct: 66 LPYTKMECEQALPYLRDLVVTIPDVQMIALAKDNHVFCGSLVGKRDYIV----------- 114 Query: 132 PLLRLTIDRALIKGS-------PVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQI 184 P + D+ + S P LI + G++ GV + L I Sbjct: 115 PNYHFSGDKLFLVSSLPDKPNTPALI-FKNETGNTGVGVS-----------VSGYYLKNI 162 Query: 185 SSASLTVDKRHLLYGNGLVDSLPQPEDNE---NYQVSSQRFPFTINVN---GPGATALAW 238 S +L +L G ++ Q D QV S+ +P+ + V+ L Sbjct: 163 LSLTLKDLDTYLQVGEKWINKAGQISDQPLPVTIQVESKDYPYRLQVSLFHDDYMNYLLS 222 Query: 239 HYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCI 298 H T + + +L +L + ++ ++AT S ++ LA +EF + QP ++ ++ + + Sbjct: 223 HKRST-IFIIILFALSMSWLIFVATGQTPSMEDKLRQALANNEFVPYVQPYVD-KTNKFV 280 Query: 299 GVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVG 356 G E+L+RW +P++G I PD+FIP+AE+ LI+P+T+ +M + + S F V Sbjct: 281 GFEVLVRWLSPKEGLIRPDLFIPLAEDSGLIIPMTKSLMLQVSNELAACSQSLPPDFSVA 340 Query: 357 INVAPSHFRRGVLIKDLNQYWFSAHPIQ--QLILEITERDALLDVDYRIA--RELHRKNV 412 N++ H L++D ++ S+ P + QL LE+TER+ + D D A L +V Sbjct: 341 FNISAKHCVNSELLEDSLEF-LSSFPEKKVQLCLELTERELVRDTDEARALFHSLSEHDV 399 Query: 413 KLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELV 472 LAIDDFGTG+SS S+L R D+LKID+SF IG+D+V++ + + ++ L RL ++ + Sbjct: 400 SLAIDDFGTGHSSLSYLRQFRFDILKIDQSFVQMIGNDSVSAHIVENLLDLASRLGMKTI 459 Query: 473 AEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 AEGVET EQA+YLR H + LQGY +A+PMPL+DF + L Sbjct: 460 AEGVETAEQAEYLRSHNIDCLQGYYFAKPMPLKDFIQQL 498 >UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI Length = 528 Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 154/465 (33%), Positives = 242/465 (52%), Gaps = 36/465 (7%) Query: 57 LDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYR 116 LD ++ + +E P + + C A L A VRSI L ++ +YC S+ G Sbjct: 54 LDSLVQHAEIANERAAPYLRMSCDNAQPYLADLVAITPDVRSIHLSENNKIYCDSLGGKG 113 Query: 117 NVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAML 176 P+ + A + LL L ++ S ++ G+ +GV ++L+ Sbjct: 114 IRPINE---SFSADEELLLLQGNKLSPNHSALIFLRDYDEGTVFSGVSSYYLRNILSL-- 168 Query: 177 LEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATAL 236 + + SL + +R G+V +P E +S ++P+++ +T+L Sbjct: 169 ----IKSYGNTSLHIGER-WFNERGVVTHRSKPTTIEQ---NSLKYPYSL------STSL 214 Query: 237 A----WHYL----PTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQP 288 W Y T L L +++S VG A+ + EI + EFE + QP Sbjct: 215 TMEDYWDYFIDAKHTSLLLLLVMSFGVGGYAFWRQGQINALDPEIRRAIRAQEFEPYIQP 274 Query: 289 LLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF- 347 +++ + E+L+RW +P G I PD+FIP+AEE LIVP+T VMA+ Q + Sbjct: 275 IMDIHGRMA-SAEVLMRWQHPSAGLIRPDLFIPLAEESGLIVPMTSQVMAKVRDQLGPYQ 333 Query: 348 -PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSA--HPIQQLILEITERDALLDVDY--R 402 + S FH+ N++ H L+KD Q++ SA HP L LE+TER+ + D + + Sbjct: 334 SKIPSDFHISFNISAKHCVNSDLVKDC-QHFLSAFNHP-SLLSLELTERELIEDTEEARK 391 Query: 403 IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIA 462 + +L++ V+LAIDDFGTG+SS ++L+T + DVLKID+SF IGS+AV S + D ++ Sbjct: 392 LFAKLNQIGVRLAIDDFGTGHSSLNYLQTFQFDVLKIDQSFVRMIGSNAVASHIVDTLLN 451 Query: 463 LGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 L QRLN++ VAEG+ET+EQ Y GV +QGY YA PMP+ DF Sbjct: 452 LAQRLNMQTVAEGIETEEQVTYFAARGVDYMQGYFYASPMPMDDF 496 >UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteobacteria RepID=A6V3S1_PSEA7 Length = 526 Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 143/452 (31%), Positives = 229/452 (50%), Gaps = 24/452 (5%) Query: 75 IGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFG-YRNVPVVDILAELPAPQPL 133 +G PC+ L + RS+ LV+ G +YCSS+ G +++P+ L + P Sbjct: 73 LGKPCAEVLGRLTRMTMLSPYFRSLVLVERGNVYCSSLQGELKDLPLPVAFKALGSLAPG 132 Query: 134 LRLTIDRA---LIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLT 190 R+T A + + + V++ A GS GV+ +I+ LL+ Q Sbjct: 133 QRITPSNATPQVPERASVIMSRGDANGS---GVLAIID----GQYLLDIQQAASYDGRFQ 185 Query: 191 VDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAW------HYLPTQ 244 V L +P +D +S RFP + V A A A+ HY P Sbjct: 186 VQMVLRESQRQLPGGMPATQDGGGAIAASARFPVEVRVAVAPALASAYRADAWRHYTP-- 243 Query: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 VL ++L GY+A L R+S ++ + EF + QP++ + +C GVE L+ Sbjct: 244 --FIVLAAMLAGYLAHLFCRRRLSLVGDMYRAMRAREFHMVYQPIIRLDTGECRGVEALV 301 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHF 364 RW P + PD+F+P+AE++ +I LTR++ + + H+G+NV+ SH Sbjct: 302 RWRRPDNSQVRPDIFVPLAEDNGMIGDLTRHIFGLVAADLAQLGLGAGDHLGVNVSGSHL 361 Query: 365 RRGVLIKDLNQYWFS-AHPIQQLILEITERDAL-LDVDY-RIARELHRKNVKLAIDDFGT 421 + D+ + + QL+LE+TER+AL D R R+L V+ A+DDFGT Sbjct: 362 AGQGFVDDVRRLLGAIGSDGPQLVLEVTEREALPRDAQAQRNIRQLRELGVQWALDDFGT 421 Query: 422 GNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQ 481 G SS S+L+ L D LK+D+SF + +G+++VN+ V + II L QRL++++ AEG+ET+EQ Sbjct: 422 GQSSLSYLQQLHADFLKVDRSFVSGVGTESVNAVVLETIIGLAQRLDLDVTAEGIETREQ 481 Query: 482 AKYLRRHGVHILQGYLYAQPMPLRDFPKWLAG 513 +YL H V QGYL++ P+ + W G Sbjct: 482 EQYLCGHSVQWGQGYLFSPPLTAAELGAWRNG 513 >UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA Length = 506 Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 153/478 (32%), Positives = 247/478 (51%), Gaps = 41/478 (8%) Query: 50 ANHAVEELDKVLLPLQAGSEVLLPLIGLP--CSVAHLPLRKQAAKLQTVRSIGLVQDGTL 107 A+ V+E+D++L + + L L+ P C + LR A + VRS L +D + Sbjct: 43 ASSVVQEVDEILEYGEEANNQSLMLLEKPDSCEAHSVALRHLVATVPYVRSANLAKDNVI 102 Query: 108 YCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMI 167 YC+SI+G + LA+ + + LRL + P+++ + + + ++ Sbjct: 103 YCTSIWGDSHYQYD--LADYSSGR--LRLMHGSKVDAKHPLIVVRSESGEDTAFSGID-- 156 Query: 168 NIDLLTAMLLEPQLPQISSASLTVDKRH--LLYGNGLVDSLP-----QPEDN--ENYQVS 218 L LLEP DK H L G +DS P D ++VS Sbjct: 157 --SLYLRQLLEPH-----------DKLHSYLAVGEQWLDSKDLVLKVNPADRLVAWHKVS 203 Query: 219 SQRFPFTI--NVNGPGATALAWHYLPTQLPLAVLL--SLLVGYIAWLATAYRMSFSREIN 274 S FP+++ + P + W Q +A+L+ +L Y+ WL+ + EI Sbjct: 204 SANFPYSVYSGFDYPSMISAFWER-DNQYIIAILIIQTLFALYLLWLSRR-PSNLYLEIE 261 Query: 275 LGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTR 334 + EF + QP+LN+ +++ G+EILLRW +P QG + PD+FIP AE LI+P+T Sbjct: 262 RAMENKEFVPYAQPILNSANREIQGIEILLRWQHPVQGTVRPDLFIPKAERSGLILPITH 321 Query: 335 YVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ-QLILEIT 391 +M T ++ ++ + FHVG+N++P H +G L+ ++ L+LE+T Sbjct: 322 QLMINTAKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVSACQEFIDIVDSKDVTLVLELT 381 Query: 392 ERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGS 449 ER+AL D+ I ++ K+AIDDFGTG+SS L + D LKID++F IG Sbjct: 382 EREALNYCDLTDEIFTQIKSMGCKIAIDDFGTGHSSLVNLRKVDLDYLKIDQTFVRDIGV 441 Query: 450 DAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 D + + +I L L++++VAEGVET+ QA+YL+ GV LQG+L+A+PMPL++F Sbjct: 442 DTITGHLLQNMITLSHDLSLDVVAEGVETEFQAEYLKERGVSYLQGFLFAKPMPLKEF 499 >UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 Tax=Edwardsiella RepID=C5BG29_EDWI9 Length = 514 Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 157/507 (30%), Positives = 265/507 (52%), Gaps = 37/507 (7%) Query: 23 ALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVA 82 +V L +T+++ + + R L + Q A+ ++D+ L Q + + G PC Sbjct: 23 GMVLLLATVTISWQASRGLAES-AKQRLTLAIGQIDEALDNAQTAVDAVRRYAGQPCDTT 81 Query: 83 -HLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRA 141 H L QA + VRS+ L Q +YCSS++G + V D + + L ++ +R Sbjct: 82 LHNMLAFQATTVPDVRSVSLAQASVIYCSSLYGAFHAEVGD---DHYTNKRLTLMSGNRI 138 Query: 142 LIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNG 201 S V+ + G +A V+ I+ L +L P + L + + Sbjct: 139 TPHRSLVVFR---EPGPGDASVLVGIDGYYLRNILRSLSTP--TPLYLRIGAGWMDPQGQ 193 Query: 202 LVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWL 261 +VD+LP P D + S R+P ++ P + W Y+ +++L L++ ++ + Sbjct: 194 VVDALP-PVDGRRFVRHSSRYPISVTTAVPIDSH--WTYMLDYSRGSLVLFLVLAFVFGV 250 Query: 262 ATAYRMS--------FSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 T YR+ + RE L Q +F + QP+++ + G EIL+RW +P+ G Sbjct: 251 GT-YRLVGQVNSPVFYLRE---ALRQRQFIPYIQPVVDGADESLSGCEILMRWQHPQMGL 306 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP----MSSQFHVGINVAPSHFRRGVL 369 I P+ FIP+AE+ LIV +TR +M + + P + + FH G N++ SHF L Sbjct: 307 IPPNNFIPLAEDSGLIVAMTRDIMRQV--SDYFAPRCRSLPTHFHFGFNISASHFNDLSL 364 Query: 370 IKDLNQY--WFSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSS 425 +++ ++ F A+PI+ L+LE+TER + D + +I +L V LA+DDFGTG+SS Sbjct: 365 VEECRRFIDAFEANPIR-LVLELTERQRVPDGELTEQIFHKLRGLGVLLALDDFGTGHSS 423 Query: 426 FSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYL 485 ++L+ D++KID+SF IGSD ++ + D +IAL +RL++ +AEGVE+ EQ ++L Sbjct: 424 LAYLQRYHFDIIKIDRSFVRMIGSDMLSGHIVDTVIALAKRLDMITLAEGVESGEQLQHL 483 Query: 486 RRHGVHILQGYLYAQPMPLRDFPK-WL 511 R + + LQGYL+ P PL DF + WL Sbjct: 484 RGYRLDYLQGYLFGCPQPLPDFTREWL 510 >UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VEI6_VIBAL Length = 511 Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 154/517 (29%), Positives = 267/517 (51%), Gaps = 43/517 (8%) Query: 13 RNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSE--V 70 R R + T+ +++ L + + + + Q++ + A+ V ++D + + +E + Sbjct: 6 RVRPLFVTLASIILSLIVLQLSYKTFLSSLQEQALDRADSIVHKIDSIFFYAEEANERTL 65 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVP------VVDIL 124 L L G C A LRK AA + VR+ + DG + C+S++G + V+D L Sbjct: 66 SLALRGNNCDEASYELRKIAASIPYVRTTNISVDGYINCTSLWGDKIFEDDDERYVLDKL 125 Query: 125 AELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINI-DLLTAMLLEPQLPQ 183 +P Q + + P+++ T + ++ +++ L + L+ L Sbjct: 126 LLMPGSQ----------VAQNHPLIVLRTNKDNMAALSGIDALHLRQTLFSSTLDSHLAY 175 Query: 184 ISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALA---WH- 239 S + +D+ L L E ++ S FP++I+V G ++L WH Sbjct: 176 FSLGKIWLDQNGALLNRDPTKQLVGVESSK-----SDFFPYSISV-GFSYSSLQEAFWHE 229 Query: 240 -YLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCI 298 L L + LS LV Y W T S E+ + + EF + Q ++NA++++ Sbjct: 230 KKFYILLILLIQLSFLVYY--WWHTTRPQSLDEELKRAIKKKEFVPYAQAVVNAKTREIE 287 Query: 299 GVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVG 356 GVEIL+RW +P QG + PD+FIP AEE LIVP+T ++ ET +Q + ++ FHVG Sbjct: 288 GVEILMRWLHPIQGVVRPDLFIPQAEESGLIVPMTELLLKETAKQLCDYSSHLTKPFHVG 347 Query: 357 INVAPSHFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDYRIARE-----LHRK 410 +N++P H R L + ++ + + L+LE+TER+ L D+ + E L + Sbjct: 348 VNISPQHCRGMGLANECKEFIQTVNQENIMLVLELTEREVL---DFSESTEVLFSDLKKL 404 Query: 411 NVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIE 470 K+AIDDFGTG+SS + L+ + + +KID+ F +GS+ + + + I L RL++E Sbjct: 405 GCKIAIDDFGTGHSSLANLQKFQVNYIKIDQMFVQGVGSNPTSRHLVESTIELANRLSLE 464 Query: 471 LVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 +VAEGVET+EQ +YL + V LQG+L+++P+PL +F Sbjct: 465 IVAEGVETEEQQEYLANYHVKYLQGFLFSKPIPLEEF 501 >UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT96_SHESA Length = 519 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 125/288 (43%), Positives = 164/288 (56%), Gaps = 14/288 (4%) Query: 233 ATALAWHY----LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQP 288 + AL WH+ LPL L +L + W R S + +I G+ EF L QP Sbjct: 233 SKALFWHFYWIAFGLLLPLIFTLFVLSSLLFWKRNG-RHSLADDIKSGIENQEFFLVYQP 291 Query: 289 LLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP 348 ++++ + GVE L+RW +P+ G + PD+FIPIAEE LIVPLT Y+ + Sbjct: 292 VVSSEDGKAKGVEALVRWQHPQMGLVRPDLFIPIAEESQLIVPLTNYIFERALADFRQLQ 351 Query: 349 MSSQFHVGINVAPSHFRRGVLIKDLN--QYWFSAHPIQQLILEITERDAL-LDVDYRIA- 404 ++S F +G NVAP HF + + + F+ +Q LI EITER L +D+ RIA Sbjct: 352 LTSDFRIGFNVAPEHFIQSDIEAKFRYLRDAFAEIGVQPLI-EITERQLLTVDMCERIAA 410 Query: 405 -RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIAL 463 REL + +AIDDFGTG ++ S L+T D LKIDK F IG D+V S V D II L Sbjct: 411 LREL---GILVAIDDFGTGQTTLSLLQTFTLDYLKIDKCFIDTIGQDSVTSHVLDTIIEL 467 Query: 464 GQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 ++N VAEGVETQEQA YL VH LQGYLYA+PM L + WL Sbjct: 468 CHKMNYVAVAEGVETQEQADYLISRDVHFLQGYLYAKPMKLNELELWL 515 >UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomonas RepID=A5W2V7_PSEP1 Length = 528 Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 164/498 (32%), Positives = 248/498 (49%), Gaps = 47/498 (9%) Query: 40 NLNQQRVVQFANHA-----VEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQ 94 N +R +Q ++HA +E ++ +L L + LLPL C A L LR Q + Sbjct: 34 NWQVEREMQASSHATTRQALEHVEHILDNLSRAANSLLPLTDSSCEQAQLMLRAQVTRNA 93 Query: 95 TVRSIGLVQDGTLYCSSIFGYRNVPV-----VDILAELPAPQPLLRLTIDRALIKGSPVL 149 VRS L + LYC+S+FG + PV VD L L ++ G P+L Sbjct: 94 FVRSTNLFRHNNLYCTSLFGEFDEPVNPGDYVD---------GKLWLMDGNSVTPGHPLL 144 Query: 150 IQWTPAAGSSNAGVMEMINID-LLTAM-LLEPQLP-QISSASLTVDKRHLLYGNGLVDSL 206 + A + G + ++ D LLTA+ L+ P QI + K +++ G+ + Sbjct: 145 VY---RASDGDHGAITTVDGDHLLTALRLIGPDEELQIRVGDAWMGKDGVVH-KGVSPAA 200 Query: 207 PQPEDNENYQVSSQRFPFTINVNGPGATA----LAWHYLPTQLPLAVLLSLLVGYIAW-- 260 P + N + S R+PF++ G A L HY L VL +L W Sbjct: 201 P----SANVLIGSTRYPFSVQ-GGYSADKQGQLLRSHYPGLLSLLLVLGALAALACRWQI 255 Query: 261 -LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVF 319 AT+ R E++ L EF + QP++ + G E+L+RW++PR+G + PD+F Sbjct: 256 RRATSPRA----ELDRALQADEFLPYFQPVVRKGDYRWAGAEVLMRWHHPREGLVRPDLF 311 Query: 320 IPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLNQYW 377 IP AE IV +TR ++ T + + + FH+G+N+ H R L+ D + Sbjct: 312 IPYAEHSGQIVAMTRALLTHTAQSLAPYAGLLEDGFHIGVNITADHCRDLSLLDDCRTFL 371 Query: 378 FSAHPIQQ-LILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 P + L LE+TER + V + +LH V +A+DDFGTG SS ++L + Sbjct: 372 QHFPPGRVVLTLELTERKLIEPTPVTLELFEKLHAMGVMIALDDFGTGQSSLNYLRQFKV 431 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID+SF A IG+DA++ + + II L +L++ +VAEGVET Q YL +HGV Q Sbjct: 432 DYLKIDQSFVAMIGADALSVHILESIIELSGKLDLGIVAEGVETDLQRDYLAKHGVDFQQ 491 Query: 495 GYLYAQPMPLRDFPKWLA 512 GYL+A+PMP F LA Sbjct: 492 GYLFARPMPAAQFLAALA 509 >UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae RepID=A4TND3_YERPP Length = 490 Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 139/489 (28%), Positives = 244/489 (49%), Gaps = 33/489 (6%) Query: 37 SQRNLNQQ--RVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQ 94 S+ L Q ++ +A+H + E+ + L+PL C A L +AA Sbjct: 8 SENKLTTQSGNIITYASHFLNEITTTM-------SQLIPLSTQSCEQASPTLHYRAAFTN 60 Query: 95 TVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPL-LRLTIDRALIKGSPVLIQWT 153 VR+ LV++G YCSS G + PV I ++ QPL ++ ++ P + W Sbjct: 61 GVRAFLLVREGVAYCSSATGEMHTPVSTIYPKVNLSQPLDFKIQQGTPMMPNKPAIAVWL 120 Query: 154 PAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNE 213 AG + G++ + L +L+ ++S +++ +D + + V + Q + Sbjct: 121 RQAGRGDTGILATMEFSLHPYLLMGRSDNEMSGSAIIIDGLAITTFDSNVLPISQLPNLN 180 Query: 214 NYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREI 273 +++ +P I + T L L ++ Y + + S EI Sbjct: 181 AREITLPGYPIKILIYHNSITKNDIRMTLLGGLLLAGLVGILAYYILIT---KKSAEAEI 237 Query: 274 NLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLT 333 G+ + EF + QP+ + +Q G+E L+RW +P +G ISPD+FIP AE HLI PLT Sbjct: 238 LRGIRRGEFFVEYQPVFRSHNQTISGLEALIRWQHPTEGRISPDIFIPYAETQHLIQPLT 297 Query: 334 RYVMAETIRQR----HVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQL--- 386 ++ IR ++FP ++ + N++P+H +D+++ +QQL Sbjct: 298 THLFELIIRDTALMVNLFPTGAK--LAFNISPAHLADDDFCQDVSRL------LQQLNTD 349 Query: 387 ----ILEITERDAL-LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + EITER + ++ + LH + +++A+DDFGTG+S+ +LE D +KID+ Sbjct: 350 IFTPVFEITERGMVQKELALKQFAWLHSQGIQIAVDDFGTGHSALIYLERFTLDYIKIDR 409 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 F + IG + V + V D ++ L ++LNIE +AEG+ET++Q YL +HGV+ LQGYL ++P Sbjct: 410 GFISTIGENTVTTPVLDSVLILAKKLNIETIAEGIETEQQLHYLAKHGVNYLQGYLLSKP 469 Query: 502 MPLRDFPKW 510 + + K+ Sbjct: 470 LSVEALAKF 478 >UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=39 Tax=Enterobacteriaceae RepID=B4T8H8_SALHS Length = 516 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 142/458 (31%), Positives = 226/458 (49%), Gaps = 29/458 (6%) Query: 79 CSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILA-ELPAPQPLLRLT 137 C+ L + A VR IG +++G + CS + G + LPA P L Sbjct: 60 CTDTLKELSRTRAFTPYVRDIGFLENGDITCSFVTGTERYHFSRLAGLSLPASYPERWLR 119 Query: 138 IDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLL 197 ++ +G L+ ++N +++ + ++ + S+ SLT Sbjct: 120 SIGSMAEGPDRLVVVYVKKVAANKAAFVIVDSQYVQELMEILAAERASAFSLT------- 172 Query: 198 YGNGLVDSLPQPEDNENYQVSSQRFPFT-----INVNGPGATALAW--HYLPTQLPLAVL 250 +G G +++ +QRF T + V P +T A+ L +PL++ Sbjct: 173 FGAG--EAITSAATLRGKAFLTQRFTSTDHTIQLMVRTPFSTLSAYWLQNLFIFIPLSLC 230 Query: 251 LS--LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNN 308 LS +++ Y W R+S +REI G+ +EF + QP+ N C GVE L+RW Sbjct: 231 LSVGMMLFYRRWYLK--RLSLAREIARGITHNEFTVHYQPVFNVEDGSCGGVEALMRWPQ 288 Query: 309 PRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGV 368 P +I+PD+FI AE +I+PL+R++ + +S F++ +N++P+H Sbjct: 289 PDGRFITPDIFITAAENEGMIIPLSRHLFELIAHDVINWTVSDDFYISVNISPAHLMDDG 348 Query: 369 LIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIAREL---HRKNVKLAIDDFGTGNSS 425 I+D+ I L+LE+TER +++ ++A +L K V +AIDDFGTG S Sbjct: 349 FIQDIEALRTRLGTIT-LMLELTERSLIVEPS-QVAEKLSTLREKGVLIAIDDFGTGYCS 406 Query: 426 FSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYL 485 S+L+ L D LKID++F I + + + V D II L QRL + +VAEGV TQ Q +Y+ Sbjct: 407 LSYLQQLPVDSLKIDRTFIDTIDTSSDDVPVLDTIITLSQRLGLNVVAEGVSTQHQLRYI 466 Query: 486 RRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNG 523 HGV +QG+LYA+PM DF WL S R NG Sbjct: 467 LSHGVGFVQGFLYARPMGANDFMSWLGKS---AQRQNG 501 >UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3R8_DICDC Length = 500 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 149/512 (29%), Positives = 260/512 (50%), Gaps = 33/512 (6%) Query: 21 ICALVTLASTLSVRFISQRNLNQQRVVQFAN----HAVEELDKVLLPLQAGSEVLLPLIG 76 + A++T + L++ + N Q +Q AN AV +++ + Q + L+ Sbjct: 4 LIAILTFLAMLAIGCGAIYYHNYQSDIQDANVSAVKAVNDIETIFNDAQRVVNLGKTLLT 63 Query: 77 LPC-SVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLR 135 +PC +V L AA +R+I LV++ +YCSS+FG N P L Q L Sbjct: 64 VPCDTVVIRKLNMLAAIENYLRTISLVRNDIVYCSSLFGVDNRPAA--LERFYKGQ--LA 119 Query: 136 LTIDRALIKGSP-VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLP-QISSASLTVDK 193 L ++ P V+ T GS AG+ + ++L ++ + L ++ + L+ D Sbjct: 120 LLPGNSVTPNKPLVMYMETTENGSVAAGIHGIHLFNILNSLSKQRDLYLRVGATWLSRD- 178 Query: 194 RHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTI--NVNGPGATALAWHYLPTQLPLAVLL 251 G+V + +V S+ + F+I V+ W L + L+ Sbjct: 179 -------GMVAPFDERTLPNYVEVPSRHYYFSILYTVDDNYTLVDFWDQEKMTLLIVFLI 231 Query: 252 SLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQ 311 +L G +A+ T+ S + + E F QP+++ +S++ G E+L RW +P+ Sbjct: 232 ALGSGMLAYKYTSRITSPVEALKRAIRNQEIVPFYQPVISTQSRELYGFEVLARWYHPKT 291 Query: 312 GWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRG 367 G+ISPDVFIP++E+ LI+PLTR +M I + + P H+GIN++ H + Sbjct: 292 GFISPDVFIPLSEQSGLIIPLTRLLMERVINDLISCQDILP--EDLHIGINISAKHCQYE 349 Query: 368 VLIKDLNQYWFSAHPIQQ--LILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGN 423 I D +Y+ A ++ L++EITER+ + R + L + +A+DDFGTG Sbjct: 350 GFIDDC-KYFIDALGTRKIRLMVEITEREKIEITPTTLRFFQNLKAAGILIALDDFGTGY 408 Query: 424 SSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAK 483 S+F +L L+ D++KID+SF + I ++ ++ + + +I L Q +N++ +AEGVET+ QA+ Sbjct: 409 SNFDYLRQLQADLIKIDQSFISMIDENSQSTPLVNCVIDLAQNMNLKTIAEGVETEFQAE 468 Query: 484 YLRRHGVHILQGYLYAQPMPLRDFPK-WLAGS 514 +L + LQGYL+++P+P + K WL S Sbjct: 469 FLSEKNIDYLQGYLFSRPLPFDECVKTWLQKS 500 >UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KH05_AERHH Length = 513 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 160/517 (30%), Positives = 265/517 (51%), Gaps = 29/517 (5%) Query: 15 RMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPL 74 R++ +C + +L + ++ +Q+ A A+ ++D L ++ LPL Sbjct: 13 RLLASLLCCATLILISLVTLYWQTWSMTRQQAQTAAERAMTQIDSALHHSTLAAKAALPL 72 Query: 75 IGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQ-PL 133 PC LR A VRS+ L ++G LYCSSIF +D+ L Q L Sbjct: 73 ASRPCREVARELRVLVATSPYVRSVNLSRNGRLYCSSIFDE-----IDLKDRLQNSQHEL 127 Query: 134 LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDK 193 LRL L + P L+ + + G + V+ IN L+ L + L S + + + Sbjct: 128 LRLEAVTQLGR-KPSLLFYHLSEG--DHAVVVAINPYHLSKPL-QWHLAGPHSW-VQIGE 182 Query: 194 RHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSL 253 + L + D P NY++ S F +++N P + LA + Q +++L + Sbjct: 183 QWLDLQGKVHDGQPPRLRGFNYRLDSATFGYSLNQGFPLSAVLA---MTLQKQGSMVLLI 239 Query: 254 LVGYIAWLATAYRM-----SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNN 308 L YR + ++E+ + + EF + QP++ +++ Q G E+L+RW + Sbjct: 240 LALGGLAGLATYRWWSHISTPTQELRRAIIKQEFVPYLQPIVVSQNGQLHGCEVLMRWQH 299 Query: 309 PRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQR--HVFPMSSQFHVGINVAPSHFRR 366 RQG I PD+FIP+AEE LI+ +T+ +M + Q H + +FH N+ H ++ Sbjct: 300 HRQGLIRPDLFIPLAEESGLIILMTQTLMQQVRLQFAPHAAALPPRFHFSFNICARHCQQ 359 Query: 367 GVLIKDLNQYW--FSAHPIQQLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTG 422 L+ D + F+A+PI L+LE+TER+ + + R+ EL + V++ +DDFGTG Sbjct: 360 LSLLDDCRSFLAAFTANPIT-LVLELTERELITPNHLTERLFEELRQMGVRIGLDDFGTG 418 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 +SS ++L+ D LKID+SF A IG++A++ + D I+L RL ++ +AEGVETQEQA Sbjct: 419 HSSLTYLQQFHVDYLKIDQSFVAMIGTNALSRHILDSTISLATRLGLQTIAEGVETQEQA 478 Query: 483 KYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPA 519 +L V LQGYLY +P+ + F + L+ P PA Sbjct: 479 DFLVERQVDYLQGYLYGRPLTPQQFLQQLS---PTPA 512 >UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae RepID=C6UPQ0_ECO5T Length = 536 Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 102/268 (38%), Positives = 155/268 (57%), Gaps = 2/268 (0%) Query: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 LPL++LLS ++ ++ + +MS + EI G++ EF + QP+ + ++ C+GVE L+ Sbjct: 265 LPLSILLSFILYFLWQRWISRKMSLAEEIKKGMSSGEFSVHYQPVCDTTTKACLGVEALM 324 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHF 364 RW ISP VFI AEE +LI+PLT+++ I+ + + FH+GIN+A H Sbjct: 325 RWQREDGKNISPVVFIRAAEEENLIIPLTKHLFELIIQDVQSWKVKKPFHLGINIAAEHL 384 Query: 365 RRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTG 422 + D+ + ++LEITER+ + D D+ + + EL + A+DDFGTG Sbjct: 385 AHPDFVADVLHIKNAISDKFNIVLEITERNLVEDTDHALQKINELRSHGCEFAVDDFGTG 444 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 S L+ L D LKIDKSF + + + V DIII L RLN+ +AEGV T QA Sbjct: 445 YCSLGLLQKLSVDYLKIDKSFIDTLTTAEDETPVLDIIIKLSNRLNLITIAEGVSTSHQA 504 Query: 483 KYLRRHGVHILQGYLYAQPMPLRDFPKW 510 +YL + V ++QGYLYA+PM +F +W Sbjct: 505 EYLIHNNVTLVQGYLYAKPMKATEFYQW 532 >UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU Length = 501 Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 133/417 (31%), Positives = 210/417 (50%), Gaps = 18/417 (4%) Query: 96 VRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSP---VLIQW 152 +R + +V DGT+ CSS G + DI P Q ++ + ++G P L+ Sbjct: 76 LREMLIVNDGTITCSSKRGELSR---DISRYYPNGQ--IKSNVVLFDLEGDPAKRTLLVI 130 Query: 153 TPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDN 212 A + GV+ ++ + + L +I + + Y N +++ N Sbjct: 131 DADAHDTTHGVISVVEKNYIAGRLGYHTDNRIKKLAFKLHDTTYPY-NASFNTV-----N 184 Query: 213 ENYQVSSQRFPF--TINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFS 270 + S R+ F + + P T YL LP++ +S+L+ + + R S Sbjct: 185 RSVVAKSDRYSFLLMLEASDPYVTERLTFYLLGALPVSFAISVLITILLFFFGG-RSSLV 243 Query: 271 REINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIV 330 ++ GL + E + QP++ + + G E L+RW NP+ G++ PD FIPIAEE LI Sbjct: 244 DDLRKGLERRELFMAYQPVVRSEPCEIKGFEALVRWVNPKLGFVGPDNFIPIAEEFGLIN 303 Query: 331 PLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ-QLILE 389 LT YV+ +R + H+G+N+ PS+ V ++ L QY + I QLI E Sbjct: 304 KLTDYVLDSVLRDWSKAKLMECHHMGVNIPPSYLLDPVCVEKLKQYAKAYKDINLQLIAE 363 Query: 390 ITERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGS 449 ITER L + ++ EL + +AIDDFGTG ++ S L+ + D LKIDK F IG Sbjct: 364 ITERQLLDEQGQQVLHELRNSGILVAIDDFGTGRTALSVLQNIEFDFLKIDKCFVDTIGV 423 Query: 450 DAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRD 506 ++VN+ V + II L +L +E+VAEGVET+ Q+ YL+ GV QGY YA+P+ D Sbjct: 424 ESVNAPVLNAIIDLSHQLQVEIVAEGVETKVQSCYLKEKGVQYQQGYYYAKPLSFSD 480 >UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya RepID=C6CFE9_DICZE Length = 501 Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 142/495 (28%), Positives = 251/495 (50%), Gaps = 50/495 (10%) Query: 42 NQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHL-PLRKQAAKLQTVRSIG 100 ++Q A AV+ ++++L + E PL+ L C+ + L AA +R++ Sbjct: 29 DRQGAYANAERAVKNIEEILDEAKNAVEDSKPLLALSCTPEVIRQLNMTAAVASHLRTVS 88 Query: 101 LVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTI-DRALIKGSPV-----LIQWTP 154 L++ +YCSS++G N P L R + + AL+ G+ V LI + Sbjct: 89 LIKRDVVYCSSLYGVDN-----------RPAALERFHMRELALLAGNSVTPDRTLIMYLG 137 Query: 155 AAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKR--HLLYGNGLVD-----SLP 207 + GV I+ LT++L L +R +LL GN + S Sbjct: 138 NTAYGSVGVA--IHGQHLTSVL-----------DLLSKRRNLYLLVGNTWISRENQVSTF 184 Query: 208 QPEDNENYQV-SSQRFPFTI--NVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATA 264 P D N+ + S + F+I ++N + A W+ + L++L G++A+ + Sbjct: 185 NPTDLPNFVIIPSGHYHFSILYSLNEKYSLADFWYKEKMTFLIVFLIALGSGFLAYKYST 244 Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 S I + E + QP+++ S++ GVE+L RW++P+ G+ISPD+FIP+ E Sbjct: 245 RINSPYDGIRRAIENQEVLPYYQPVISTVSREIYGVEVLARWHHPKSGFISPDIFIPLCE 304 Query: 325 EHHLIVPLTRYVMAETIRQR--HVFPMSSQFHVGINVAPSHFRRGVLIKDLNQY--WFSA 380 + LI+P+TR +M+ +R H+ + H+ IN++ H + I D + F Sbjct: 305 QSGLIIPMTRSLMSSVVRDLTPHLNTLPDNLHIAINISAQHCQSDDFITDCQNFIAAFGD 364 Query: 381 HPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 + L++EITER+ + I ++L V +A+DDFGTG S+F +L L +V+K Sbjct: 365 KNV-HLMIEITEREKVDITPETIGFFKKLSDAGVLIALDDFGTGYSNFDYLRKLHVNVIK 423 Query: 439 IDKSFTAAIG-SDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 ID+SF + I +D +ST+ + +I L Q++ + +AEGVET+ Q ++L R ++ +QGY Sbjct: 424 IDQSFVSMIDENDPQSSTLVNCVIDLAQQMKLMTIAEGVETEFQTEFLSRKHINFMQGYF 483 Query: 498 YAQPMPLRDFPK-WL 511 +++P+P + + WL Sbjct: 484 FSRPLPFDELAQTWL 498 >UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae RepID=C8QG51_9ENTR Length = 534 Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 164/535 (30%), Positives = 252/535 (47%), Gaps = 49/535 (9%) Query: 12 RRNR-----MIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQA 66 RRNR +IVC L+ L + I R+ Q+ + AN + + +++ Sbjct: 5 RRNRDFGWLLIVC--AGLLPLVLGILCTAIEARHTVHQQQINTANSLLAQAERMSDSAWD 62 Query: 67 GSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAE 126 L PCS L+++ RSIG ++ + CSS +G + +++ Sbjct: 63 MITDLRQFHYQPCSAIEGKLQREGNLNAYFRSIGKLEGDNVTCSSAYGMYPGTLSEMILR 122 Query: 127 LPAPQPLLRLTIDRALIKGSP-----VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQL 181 P +I G P + ++ P A + +D + A L Sbjct: 123 QPPVTGKAWWSISLRGTYGVPDRPAVIFVRQLPDGEGFWAVIDGQYLMDFMRA------L 176 Query: 182 PQISSASLTVDKRHLLYGNGL-VDSLP---QPE---DNENYQVSSQRFPFTINVNGPGAT 234 + + +T + + +G + S P QPE +E S R+P ++ V P + Sbjct: 177 GESRNYHMT-----MRFNDGAPITSGPVEVQPEIWLKSEPLLAQSSRYPISVEVVVPPSE 231 Query: 235 AL-AW-HYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNA 292 L AW L LP+A + S+L+ + R+S+ EI + +F + QP+ + Sbjct: 232 LLKAWRQALFIFLPMAAIFSILLMILTANWLRRRISWRDEIRRAMRNRQFSVHYQPVYSV 291 Query: 293 RSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY---VMAETIRQRHVFPM 349 Q C GVE LLRW+ P I PD+FI AEE +IVPLTR+ +MAE I+ V P Sbjct: 292 AEQHCNGVEALLRWHLPNGDTIRPDIFISAAEEEGMIVPLTRHLLELMAEDIQSWQVAP- 350 Query: 350 SSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ----QLILEITERDALLDVD--YRI 403 FH+G+N+A H + +KD+ + A +Q Q+ LE+TER + D + R Sbjct: 351 --GFHIGLNLAAEHLQHPDFVKDIELF---ARRVQDKKLQITLELTERSLIHDGEDVARK 405 Query: 404 ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIAL 463 R L + +++AIDDFGTG+ S S+L T D LKID+ F AI + V D II L Sbjct: 406 LRLLQSQGMRVAIDDFGTGHCSLSYLLTFPLDYLKIDRGFINAIERLDGETPVLDAIINL 465 Query: 464 GQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL--AGSQP 516 ++L +E++ EGVET Q +YL++ GV +QGY YA PM WL G QP Sbjct: 466 ARKLQLEVLGEGVETSLQFQYLQQRGVLFIQGYYYAWPMDNDRLRTWLNEQGQQP 520 >UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholderia cepacia complex RepID=A9AQW1_BURM1 Length = 588 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 145/502 (28%), Positives = 241/502 (48%), Gaps = 23/502 (4%) Query: 15 RMIVCTI---CALVTLAS-TLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAG-SE 69 R+ C + C LV + L+ R+ + +V A +D++L L++ ++ Sbjct: 80 RLAFCAVVIACVLVPAGALVLAGRYARDAVARHEGLV--AGDIAASVDRILNSLRSRHAD 137 Query: 70 VLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPA 129 VL PL+G PC PL + +L+ +R+I LV L CSS G + P+ D PA Sbjct: 138 VLPPLVGRPCRQIFAPLAEAETRLRYLRAIALVNGNRLTCSSALGAIDAPL-DAYVRAPA 196 Query: 130 PQPL-----LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQI 184 P + L + +G PVL+ + A + +AGV+ +I D + L Sbjct: 197 ATPAADGTRIALLSETPYQRGIPVLVAFR--ATARDAGVLYLIEGDYVADALAHSGSYGA 254 Query: 185 SSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPG--ATALAWHYLP 242 SA+L++ L G + ++S+ +PFT++V + + Y Sbjct: 255 ESATLSIAGAGRLDHRGRFIPASRAVRPRGTAIASRAWPFTVSVVASAQYVSQVERRYRL 314 Query: 243 TQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEI 302 +A+L+ LV +ATA R + + L ++EF + QP++ +++ +GVE Sbjct: 315 LFGTIALLVDALVVAAYLIATAPRRLLLKAVGDALRRNEFHVVYQPIVEIETRRTVGVEA 374 Query: 303 LLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPS 362 LLRW++P+ G ISP F+P E ++ +T YV+ + + + + INVAP Sbjct: 375 LLRWHHPKWGAISPTAFVPQVESSAVLPRVTEYVLRTAVSELTALAPAMPLRIAINVAPK 434 Query: 363 HFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIA---RELHRKNVKLAIDDF 419 R + +++ P L+LE+TER LL+ + R L K VK AIDDF Sbjct: 435 DLERPRFMSIVDEAIRRLPPGFTLVLEVTER-VLLEKNPRTTAMFAALRAKGVKFAIDDF 493 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GT +S+ L D +KID+ F A + D ++ + + I A+ +++VAEGVET+ Sbjct: 494 GTQHSNLDMLSRFPFDYVKIDRQFVAQL--DGGSARLIEGIAAVAHHYGLKIVAEGVETE 551 Query: 480 EQAKYLRRHGVHILQGYLYAQP 501 EQ + L G+ QGYLY +P Sbjct: 552 EQHRALHAVGIQYAQGYLYRRP 573 >UniRef50_Q1Z832 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z832_PHOPR Length = 504 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 107/268 (39%), Positives = 154/268 (57%), Gaps = 2/268 (0%) Query: 240 YLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIG 299 Y +P+ ++L L + Y+ +L + R ++ E+ L L EF L QP ++A S G Sbjct: 219 YFLLSIPITLVLYLTLYYMRYLFSRERSMYT-EVKLALKMREFFLHYQPHIDASSGSVFG 277 Query: 300 VEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINV 359 +E L+RW +P +G I PDVFIP+ EE+ LI +T YV+ +++ H+GINV Sbjct: 278 LEALIRWQHPVRGVIYPDVFIPLMEEYGLINEMTDYVLETAYHDLVEKDLTAGLHLGINV 337 Query: 360 APSHFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDYRIARELHRKNVKLAIDD 418 P +F I L +Y I +L LEITER L D+ L + + IDD Sbjct: 338 PPGYFSDKKNISLLKKYKQKFDNIGIRLGLEITERQFLDDLARESISHLRTAGIDILIDD 397 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG +S S LE D LKIDK F +IG ++VN+ + + II L + LN+ L+AEGVET Sbjct: 398 FGTGQTSLSVLEQTNIDYLKIDKCFVDSIGHESVNAPILNAIINLAKELNVGLIAEGVET 457 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRD 506 + QA+YL V + QGYLYA+PMP+ + Sbjct: 458 EVQAQYLLAQEVTLHQGYLYAKPMPIEE 485 >UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=12 Tax=Enterobacteriaceae RepID=B5XY29_KLEP3 Length = 511 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 160/514 (31%), Positives = 252/514 (49%), Gaps = 49/514 (9%) Query: 12 RRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVL 71 RRN I ++ +V LA + + + +Q V A A +++ +L A + Sbjct: 6 RRNAWIAFSLALVVFLAGVFVINWQLWHS-DQATHVAAARQAAKKIAAILDEAHAATATA 64 Query: 72 LPLIGLPCS-VAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 L + CS L +AA +R+I L++DG ++CSS+ G R V L P Sbjct: 65 LNVSRSGCSGQGQFQLGTEAALQPHLRTILLIKDGQVWCSSLPGNR----VLTLHPESLP 120 Query: 131 QPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLT 190 L+L R ++ PVLI T +A ++ + +I L A+ + +A L Sbjct: 121 DEKLQLLPARMMVNKRPVLIYHTRSAQVRV--IVSISDIHLRDALYSDE-----DNAGLA 173 Query: 191 VDKRHLL---YGN-GLVDSLPQPEDNENYQVSSQRFPFTINV-NGPGATALAWHYLPTQL 245 + H + YG+ G + + P + SS +PF I P + P++L Sbjct: 174 LSVNHQMIARYGDVGPLKASPHQD-----IFSSPDYPFRIIYPESP-------FFSPSRL 221 Query: 246 ------PLAVLLSLLVGYIAWLATAYRMSFSREINL--GLAQHEFELFCQPLLNARSQQC 297 L + S+ + + L + S E NL +AQ F QP++N ++ + Sbjct: 222 FQNGFGLLIFIFSVSLLFYFLLRKYLNVYTSEEENLRYAIAQGYIVPFYQPVVNGKTGEI 281 Query: 298 IGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ----F 353 GVEIL RW N SP FIP+AE LI+PLTR +MA+ Q + P+ S+ F Sbjct: 282 YGVEILARWKNATTQRRSPAEFIPLAERTGLIIPLTRSLMAQVAAQMN--PIFSKLPDGF 339 Query: 354 HVGINVAPSHFRRGVLIKDLNQY--WFSAHPIQQLILEITERDALLDVDYRIAR--ELHR 409 H+G+N++ SH I D Y F + +L+LEITE++ LL D + + LH Sbjct: 340 HIGLNISVSHINAPSFIDDCLHYQRGFEGKAV-KLMLEITEQEPLLLNDAVVDKLNTLHS 398 Query: 410 KNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNI 469 + +A+DDFGTG S S L L D +KID+SF + +A +S + D +I + + L++ Sbjct: 399 RGFSIALDDFGTGYSGLSCLHELVFDYIKIDQSFVGRVTGEAPSSKLLDCVIEMARTLSL 458 Query: 470 ELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 ++AEGVETQ Q +YL R +H+LQGY + +PMP Sbjct: 459 RIIAEGVETQVQLEYLNRQNIHLLQGYYFWKPMP 492 >UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJN3_CITRO Length = 513 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 130/428 (30%), Positives = 214/428 (50%), Gaps = 24/428 (5%) Query: 96 VRSIGLVQDGTLYCSSIFGYRNVPVVDILA-ELPAPQPLLRLTIDRALIKGSPVLIQWTP 154 +R IG++++G + CS + G + P + LPA P + + + + +G + Sbjct: 85 IRDIGVLENGEMTCSFVSGEKRQPFSQLSGLTLPALLPERMILVAKRMAEGPDRPVILYA 144 Query: 155 AAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLV---DSLPQPED 211 S+ V +++ + ++ + +++ +V + + GN +V DS +P Sbjct: 145 EKISAQKAVFTIVD-----SQYIQELMDILAAERSSVFRLTMGNGNAIVSGVDSGEKPFL 199 Query: 212 NENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYR----- 266 + + +S + V +T AW L + +LLSL ++ YR Sbjct: 200 TQRF--TSANGDIHLRVETSFSTLSAWWL--QNLLIFILLSLCFSFL--FVLLYRRWRQK 253 Query: 267 -MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 +S REI G+A +EF++ QP+ N C G E LLRW P +ISPD+FI AE Sbjct: 254 SLSLGREIERGIANNEFQVHYQPVFNVGRSACGGAEALLRWPQPHGRFISPDIFITAAEN 313 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQ 385 IV LTR++ + + + F++ +N+AP H + D+ + Sbjct: 314 EGKIVALTRHLFDLIAKDVSRWKVPEGFYISVNIAPEHLISDDFVSDVMALKERLAKLG- 372 Query: 386 LILEITERDALLDVDYRIAR-ELHR-KNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSF 443 LILE+TER + + A+ EL R + V++AIDDFGTG S S+L+ L D LKID++F Sbjct: 373 LILELTERSLIAEPAKVSAKLELLRSQQVEIAIDDFGTGYCSLSYLQQLPADYLKIDRTF 432 Query: 444 TAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 I + + + D II L Q L +++VAEGV ++ Q +Y+ GV+ +QGYLYA+PM Sbjct: 433 INTIDTSGSDVPILDTIITLSQNLGLQVVAEGVSSKHQLRYILDQGVNYIQGYLYARPMS 492 Query: 504 LRDFPKWL 511 DF WL Sbjct: 493 SADFMVWL 500 >UniRef50_C9NZP3 Rtn protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NZP3_9VIBR Length = 499 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 127/425 (29%), Positives = 211/425 (49%), Gaps = 23/425 (5%) Query: 96 VRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSP---VLIQW 152 +R + +VQDG CSS G ++ + + A + I KG P ++ Sbjct: 89 LRELIIVQDGVAICSSKRGELHLDLTGVFKRNEAKSGVFLFDI-----KGDPRQRTMVVV 143 Query: 153 TPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDN 212 T +N+G +++ + L L + + ++S + ++ V D Sbjct: 144 TAQEDRANSGAFAIVDKNYLVERLGKVEDDKLSFITARFGQKVYPADRTFV------SDT 197 Query: 213 ENYQVSSQRFPFTINVNGPGA----TALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMS 268 +Y +S + F++ V A A+ + L L + ++L + R S Sbjct: 198 LHYTSTSSLYGFSLLVEASPAFIKRRAIFYGLSSLPLSLLISITL---FAVMSHIRNRDS 254 Query: 269 FSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHL 328 ++ GL + E L QP+++++++ G+E L+RW +P G I PDVFIP+AE L Sbjct: 255 LVDDLKKGLKRKELFLAYQPIVDSQTETLAGLEALIRWQHPTLGLIRPDVFIPLAERQQL 314 Query: 329 IVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ-QLI 387 I +T YV+ T+ + H+GINV PS+ + +L+ Y I QL Sbjct: 315 INTITDYVLKRTLADLQSIANFNGIHLGINVPPSYLHDESHLINLHSYARQFRHIGIQLT 374 Query: 388 LEITERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 +E+TER+ L D +L + + ++IDDFGTG+++ S ++ + D LKIDK F I Sbjct: 375 VEVTEREILDDKGRTALADLRKSGILVSIDDFGTGHTALSVIQKTQFDYLKIDKCFVDTI 434 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 G + VNSTV + II LG RL ++++AEGVE Q Q +YL + V LQGY +++P+ L D Sbjct: 435 GLETVNSTVLNTIIDLGHRLGVKMIAEGVEEQNQVEYLAKMNVSYLQGYHFSKPLELDDL 494 Query: 508 PK-WL 511 + WL Sbjct: 495 KESWL 499 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 155/265 (58%), Gaps = 13/265 (4%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ R++ GL + EF+++ QP+L+ R+++ + VE L+RW++P +G ISP FIPIAEE Sbjct: 493 RLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVEALVRWHHPERGLISPGEFIPIAEE 552 Query: 326 HHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SA 380 LIVPL +V+AE RQ R FP + V +N++ FR L D+ Q + Sbjct: 553 TGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFRHPSLTADIAQILAETG 612 Query: 381 HPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P L LEITE + D + R+L + V+LA+DDFGTG SS S+L+ D +K Sbjct: 613 LPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTGYSSLSYLKRFPTDAMK 672 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + + + + +IA L +++ EGVET+EQ ++L R G ++QG+L+ Sbjct: 673 IDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQLEFLERVGCDLVQGFLF 732 Query: 499 AQPMPLRDFPKWL------AGSQPP 517 A PMP + ++L +G PP Sbjct: 733 APPMPPDEVARFLHTGLQTSGFHPP 757 >UniRef50_A5VAG1 EAL domain protein n=2 Tax=Alphaproteobacteria RepID=A5VAG1_SPHWW Length = 537 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 150/517 (29%), Positives = 236/517 (45%), Gaps = 45/517 (8%) Query: 17 IVCTICALVTLASTLSVRFISQRNLNQQRVVQF----ANHAVEELDKVLLPLQAGSEVLL 72 I+ + +V +A L VR ++ + + ++ AN + + LL + Sbjct: 15 ILAGLLPMVAVAHLLRVRAVAAEQRHMEEYARWTLIRANQVFADARRTLLAAEVPP---- 70 Query: 73 PLIGLPCSVAHLP-LRKQAAKLQTVRSIGLVQDGTLYCSSI--FGYRNVPVVDILAELPA 129 G CS H+ LR+ A ++V IG +DG L C+S+ G R +P Sbjct: 71 ---GTECSPEHVARLRQIAMDARSVEDIGYFRDGRLACTSLGPVGQR----------VPR 117 Query: 130 PQPLLRLTIDRALI-KGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSAS 188 P LRL A+I P + P S+ G +I + L +L + + + Sbjct: 118 TPPDLRLGGGFAVIFHLQPRTFRSQPMLAMSHGGYTALIKPERLVDVLTDSHM----TLG 173 Query: 189 LTVDKRHLLYGNGLVDS------LPQPE---DNENYQVSSQRFPFTINVNGPGATALAW- 238 + L+ +G D + P D+ + S + P T A AL Sbjct: 174 IAAGPGRLIALSGRTDPQLLRTLIAGPTAGIDDHHVFASLREAPLTAFAFSDRAQALGRL 233 Query: 239 --HYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQ 296 YL ++ +LLVG + W++ R+S +E+ + + + EF + QP+++ + + Sbjct: 234 RNDYLLLLPMGLLVSTLLVGLVIWVSR-QRLSPEKELAIAIRKREFVVHYQPIIDLSNGR 292 Query: 297 CIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIR-QRHVFPMSSQFHV 355 C+ E LLRW P WI PD+FIP+AEE LI PLT ++ I Q + H+ Sbjct: 293 CVAAEALLRWRRPDGRWIGPDLFIPLAEETGLISPLTDLLIERVIEDQAALLRADRDLHI 352 Query: 356 GINVAPSHFRRGVLIKDLNQ-YWFSAHPIQQLILEITERDAL-LDVDYRIARELHRKNVK 413 IN++ G + L + S Q+ +E TE+ + ++ Sbjct: 353 SINISARDLESGRFLPVLTEAVTRSGVAPSQIWIEATEQGFIRAEIAAGAVEAARAAGHM 412 Query: 414 LAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVA 473 +AIDDFGTG SS S L+ L D LKIDKSF AI +DA S VT II + L + ++A Sbjct: 413 VAIDDFGTGYSSLSLLQGLPLDALKIDKSFVEAIATDAATSVVTPHIIDMAHGLKLRIIA 472 Query: 474 EGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 EGVET+EQ YLR GV + QG+LY+ +P +F + Sbjct: 473 EGVETREQEAYLRAAGVRLAQGWLYSHALPASEFATF 509 >UniRef50_Q7BQS9 Sea19 n=1 Tax=Serratia entomophila RepID=Q7BQS9_9ENTR Length = 408 Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 116/318 (36%), Positives = 184/318 (57%), Gaps = 23/318 (7%) Query: 213 ENY---QVSSQRFPFTINVNGP--GATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRM 267 ENY Q+ S R+P+++ T L Y+ L L +L+++ G I L +R+ Sbjct: 94 ENYIERQLFSSRYPYSVTAVATQFSQTPLIGDYVGVSLALLPVLAIIAG-ITTLRMVWRI 152 Query: 268 SFS-REINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ L + +F + QP++ S + G E+L+RW +P+ G +SP FI +AEE Sbjct: 153 TSPLAQLRRALRKQQFMPYFQPIVRGGSGELTGAEVLVRWQHPKMGVLSPANFIALAEES 212 Query: 327 HLIVPLTRYVMAETIRQRHVF-PMSSQ----FHVGINVAPSHFRRGVLIKDLNQYW--FS 379 LIVP+TR +MA+ R F P++++ FH G N++ HF LI D + F Sbjct: 213 GLIVPMTRDLMAQV---RECFSPLANRLPGDFHFGFNISAYHFNDINLIDDCRDFLKAFG 269 Query: 380 AHPIQQLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 H ++ L+LE+TER L+ ++ I + LH+ V +A+DDFGTG SS S+L+ + D+L Sbjct: 270 LHRVK-LVLELTERQVLVSNELTIHIIQSLHQLGVLIALDDFGTGYSSLSYLQDHQIDIL 328 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYL-RRHGVHILQGY 496 KID+ F + IG+D ++ + D +++L + L+I VAEGVET+ Q YL +R VH LQGY Sbjct: 329 KIDRRFISQIGADTLSCHIVDHLLSLAECLDITTVAEGVETEAQRAYLCQRQSVH-LQGY 387 Query: 497 LYAQPMPLRDF-PKWLAG 513 L+ +P F +WL G Sbjct: 388 LFGRPESQDLFLHQWLGG 405 >UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH Length = 511 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 109/319 (34%), Positives = 180/319 (56%), Gaps = 19/319 (5%) Query: 209 PEDNENYQVS-SQRFPFTINVNGPGATAL--AWHYLPTQLPLAVLLSLLVGYIAWLATAY 265 P+D+ + S S+++PF++ P L AW +P+A+ +L A+L + Sbjct: 192 PDDSGIQKESHSKKYPFSLIYIIPVKMQLTYAWKQAWYMIPVAIFGGILT---AFLLSRR 248 Query: 266 RMSFSRE-INLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R S + + LA EF + QP+++A++ Q G E+L+RW++P G I PD FIP+AE Sbjct: 249 RPSSPLDMLKNALAHGEFRPYFQPIISAKNHQLTGCEVLIRWHHPVSGIIPPDQFIPLAE 308 Query: 325 EHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 LI P+T+ +M++ H P +QFH+GIN++P+HF L +D + S Sbjct: 309 STGLIAPITQQLMSQVEHSLNSVAHFLP--NQFHIGINISPAHFLSPGL-EDSCMKFLST 365 Query: 381 HPIQQ--LILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P + L+LE+TER+ L A +LH++ V A+DDFGTG ++ S+L++ D Sbjct: 366 FPKGKVKLVLELTERNQLSVTAESKALFAKLHQQGVLFALDDFGTGYATHSYLQSFPVDY 425 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 +K+DK F +G D ++ + + +I L +RL I+++AE +ET+ Q ++ G LQGY Sbjct: 426 IKLDKGFVQMVGVDEISGHIVENVIELARRLGIDIIAEVIETESQELFMTEKGSCYLQGY 485 Query: 497 LYAQPMPLRDF-PKWLAGS 514 YA P+P F +W+ S Sbjct: 486 RYAPPLPAEQFIAEWVYNS 504 >UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 Length = 530 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 158/290 (54%), Gaps = 11/290 (3%) Query: 245 LPLAVLLSL-LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEIL 303 LP+A ++S +V WL+ R+S E+ + + + EF + QPL+ ++ C+G E L Sbjct: 241 LPIAGVISTGMVILTIWLSR-RRLSLRGELAIAIRRREFTVVYQPLIELKTGICVGAEAL 299 Query: 304 LRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPS 362 +RW P + PD+FIPIAE +I +T V+A T+R V HV IN+A Sbjct: 300 VRWRRPDGAMVMPDLFIPIAENSKMISQITEQVVANTVRDLGDVLAADEALHVAINMADD 359 Query: 363 HFRRGVLIKDLNQ-YWFSAHPIQQLILEITERDALLDVDYRIARELHRK-NVKLAIDDFG 420 +G ++ + + + +Q+ LE TER + R E R+ +AIDDFG Sbjct: 360 DLAQGRILTVVQRAIRGTGIRTEQIWLEATERGFMDPKSTRTIIEKARELGHSIAIDDFG 419 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 TG SS +L+ L D LKIDKSF + +G+D+ S + IIA+ + L++ +VAEG+E QE Sbjct: 420 TGYSSLHYLQELPVDTLKIDKSFISTLGTDSATSPIAAHIIAMAKSLDLIIVAEGIERQE 479 Query: 481 QAKYLRRHGVHILQGYLYAQPMPLRDF------PKWLAGSQPPPARHNGH 524 QA YL HGV QG+LY+ P+P ++F K G+ P R H Sbjct: 480 QADYLIAHGVQFGQGWLYSPPLPAQEFIEFYKAQKATKGAGPAIIRKKKH 529 >UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xanthomonas RepID=Q3BN81_XANC5 Length = 520 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 168/548 (30%), Positives = 250/548 (45%), Gaps = 83/548 (15%) Query: 12 RRNRMIVCTICALVTLASTLSVR---FISQR---NLNQQRVVQFA-------NHAVEELD 58 +R R+I T+ LV L++TL + +++ R + R+ Q A A +E Sbjct: 2 KRQRIISVTVL-LVLLSATLPIGLSYYLAWRLALAREEGRLSQLAALSIRRTETAFDEAH 60 Query: 59 KVLLPLQAGSEVLLPLIGLPCSVAHLP-LRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRN 117 LL + A LP PCS HL +R + +G Q G L C+S RN Sbjct: 61 GALLSMAASR---LP----PCSPPHLAQMRALVLTSHYIVELGRFQQGRLSCTSWGQLRN 113 Query: 118 VPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAA-----------GSSNAGVMEM 166 PQ T D + +G V + P A G NA + Sbjct: 114 T----------IPQ----RTADFVVKRGIAVTTRLLPLANPQRPLMALQLGDYNA----L 155 Query: 167 INIDLLTAMLLEPQL--------PQISSASLTVDKRHLLY-------GNGLVDSLPQPED 211 IN D L + + P L QI S++ T +R L G+ L+ + D Sbjct: 156 INPDTLADINIPPGLQLAIGTPDGQILSSTGTAAERLLTDPPATREPGDLLLSQVLFGRD 215 Query: 212 NENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSR 271 + P + GP A A +P + +A+LL VG + W++ R+S Sbjct: 216 RRGDWAAVVTEPVAY-LRGPLAAA-RLQLVPVGIAVALLL---VGAVLWVSR-RRLSPLA 269 Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 + + + + EF + QP++ S C+G E L+RW P + PD FIP+AE+ LI+P Sbjct: 270 RLEIAVQRGEFIVHYQPIIALDSGACVGAEALVRWQQPDGVLVPPDAFIPLAEQSGLILP 329 Query: 332 LTRYVMAETIRQRH-VFPMSSQFHVGINVAPSHFR----RGVLIKDLNQYWFSAHPIQQL 386 +T V+AE IR+ HV INV+ + +GVL + L + QL Sbjct: 330 ITDLVVAEVIRELGPTLAADPALHVAINVSADDIKSGRVQGVLAQALRGTGVDSG---QL 386 Query: 387 ILEITERDALLDVDYRIARELHRKNV--KLAIDDFGTGNSSFSWLETLRPDVLKIDKSFT 444 +E TER +L+D+D H + ++IDDFGTG SS +L+ L D LKIDKSF Sbjct: 387 WVEATER-SLMDIDAARTTITHLRGAGHTVSIDDFGTGYSSLQYLQGLPLDALKIDKSFV 445 Query: 445 AAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPL 504 IG+ + S VT II + + L + +AEGVE QEQ YLR HGV + QG+L+++ +P Sbjct: 446 DTIGTHSATSAVTAHIIEMAKTLRLRTIAEGVERQEQLDYLRAHGVDLAQGWLFSRALPA 505 Query: 505 RDFPKWLA 512 F + A Sbjct: 506 TGFIAYYA 513 >UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobacteriaceae RepID=YCGG_ECOLI Length = 507 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 149/531 (28%), Positives = 241/531 (45%), Gaps = 82/531 (15%) Query: 17 IVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIG 76 I+ IC +T + L+++ + + A +A ++ +L ++ + + G Sbjct: 8 ILVAICLFITGVAILNIQLWYSA---KAEYLAGARYAANNINHILEEASQATQTAVNIAG 64 Query: 77 LPCSVA-HLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYR----NVPVVDILAELPAPQ 131 C++ L +AA +R+I +++ G ++C+S+ G R +PV P Sbjct: 65 KECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPV------FPDSN 118 Query: 132 PLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTV 191 LL ID + P+L+ A T +L+ I A L V Sbjct: 119 LLLAPAIDT--VNRLPILLYQNQFAD---------------TRILVTISDQHIRGA-LNV 160 Query: 192 DKRHLLYGNGLVDSLPQPED-----NENY----QVSSQRFPFTINVNGPGATALAWHYLP 242 + + Y + D + P N +Y +V S ++ FTI N P + + + Sbjct: 161 PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSF-YRLID 219 Query: 243 TQLPLAVLLSLLVGYIAWLATAY-------RMSFSREINLGLAQHEFELFCQPLLNARSQ 295 + + + L+ A+L Y R IN G E F QP++N R Sbjct: 220 KGFGILIFILLIACAAAFLLDRYFNKSATPEEILRRAINNG----EIVPFYQPVVNGREG 275 Query: 296 QCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF--PMSSQF 353 GVE+L RW P G+ISP FIP+AE+ LIVPLT+ +M + RQ + + F Sbjct: 276 TLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGF 335 Query: 354 HVGINVAPSH------------FRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDY 401 H+GIN + SH FR +DLN L+LE+TER+ L +VD Sbjct: 336 HIGINFSASHIISPTFVDECLNFRDSFTRRDLN-----------LVLEVTEREPL-NVDE 383 Query: 402 RIAREL---HRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTD 458 + + L H +A+DDFGTG S S+L L D +KID SF + +D ++ + D Sbjct: 384 SLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILD 443 Query: 459 IIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPK 509 ++ L ++L+I +VAEGVET+EQ YL ++ + QGY + +P+ D K Sbjct: 444 CVLDLARKLSISIVAEGVETKEQLDYLNQNYITFQQGYYFYKPVTYIDLVK 494 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 152/259 (58%), Gaps = 7/259 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 M E+ + EF ++ QP+++ + + +G E LLRW +P +G ISP F+ +AEE Sbjct: 569 MQMETELRRAAEREEFLVYYQPIVDLATLKMVGFETLLRWQHPERGIISPGEFMAVAEET 628 Query: 327 HLIVPLTRYVMAETIRQRH----VFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 LI+P++ +VMAE RQ +FP S + +G+N++ HF++ L+ +L + Sbjct: 629 GLILPISWWVMAEACRQMQRWAVIFPRSRKLRIGVNLSGRHFQQADLLPNLRSILAETGF 688 Query: 382 PIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P Q+L LE+TE + + + IA E+ + +++DDFGTG SS S+L D LKI Sbjct: 689 PAQRLCLEVTEGILIDNKEVAIATLEEIRAMGIGVSMDDFGTGYSSLSYLHRFPIDTLKI 748 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D++F +A+ S+ ++T+ I+ L L +++VAEG+ET+EQ + L+ G + QGY +A Sbjct: 749 DRTFISALNSEESSATIVHAILMLAHSLRLQVVAEGIETREQYRALQALGCNYGQGYFFA 808 Query: 500 QPMPLRDFPKWLAGSQPPP 518 +P+ R K LA PP Sbjct: 809 RPLSARQVEKLLARQSLPP 827 >UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15_SYNE7 Length = 525 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 156/526 (29%), Positives = 251/526 (47%), Gaps = 58/526 (11%) Query: 12 RRNRMI--VCTICALVTLASTLSVRFISQRNL---------NQQRVVQFANHAVEELDKV 60 +RN +I V T + L + +S+ S+ L + +++ + A +++DK Sbjct: 3 KRNALIFAVGTSVFAIALPTLISINIASREALIGEQNYMLATARGLLRSSEKAADQVDKG 62 Query: 61 LLPLQAGSEVLLPLIGLPCSVAHLP-LRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVP 119 L+A V C + +RK +++IG V L CSS+ G ++ Sbjct: 63 FKELRALQSVQ------TCDPEQIQVMRKIDLASAYIQAIGYVSGNKLVCSSM-GKDSLD 115 Query: 120 V--VDILAELPAPQPLLRLTIDRALIKG-SPVLIQWTPAAGSSNAGVMEMINIDL--LTA 174 + VDI+ A LR ++ KG ++I+ A V I+ D+ ++ Sbjct: 116 LGPVDIVQPSGAK---LRRNVEFDFAKGLKFIVIERDSFAAVIQKDVPLDISKDIENISI 172 Query: 175 MLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGP--- 231 L P+ +A +D + + N +S + + VSSQR+ V P Sbjct: 173 TTLSKSNPETLTARGFIDPKWISALNNQQESTFIDKGHIIAAVSSQRYFLGAVVATPVTG 232 Query: 232 ---GATALAWHYLPTQLPLAVLLSLLVGYIAWLATAY----RMSFSREINLGLAQHEFEL 284 A+AW +P + +L G I WL+ Y +++ I + + EF L Sbjct: 233 LASRTRAIAWIIVP--------VGILAGIILWLSVIYFLRGQLALPAVIKTAIKRREFFL 284 Query: 285 FCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQR 344 QP++N ++ +G E L+RW P ++PD+FIP+AE+ LI +T Y++ ET+ + Sbjct: 285 TYQPIVNLQTGDWVGAEALVRWKRPDGKTMAPDIFIPVAEDSGLIQLITEYIV-ETLSRE 343 Query: 345 HV--FPMSSQFHVGINVAPS--HFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVD 400 + F +FH+GIN++ + H + V + SA P LI+E TER D Sbjct: 344 AIGFFDEFPRFHIGINLSAADLHTPQTVSLMRKVAKATSAKP-GSLIVEATERGF---TD 399 Query: 401 YRIAR----ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTV 456 ++A L +++AIDDFGTG SS S+LE L D LKIDKSF IG D S V Sbjct: 400 PKLANGVISSLRADGIQVAIDDFGTGYSSLSYLENLELDYLKIDKSFVDTIGRDTATSNV 459 Query: 457 TDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 II + + L++ +VAEGVET+ QA +LR GV QG+ +A+PM Sbjct: 460 VTHIIEIAKTLDLMMVAEGVETELQANFLRNRGVQYAQGWFFAKPM 505 >UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5V4_NITSB Length = 793 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 151/250 (60%), Gaps = 4/250 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 +++ +E+ + ++E L+ QP ++ R+++ G E L+RWN+P +G+I P FIP+AEE Sbjct: 541 KVTLKQELKKAIEKNELMLYLQPKISVRTKKVEGFEALIRWNHPTRGFIPPSKFIPLAEE 600 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ 384 LI+PLT ++ E R + + + IN++ HF LI+ + + + Sbjct: 601 SALIIPLTEWIFQEVDRLLDQLQQNGIESPIAINISARHFATDKLIEQITTNIKKEYIQK 660 Query: 385 QLI-LEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 LI LE+TE + D++ + ++LH +K+A+DDFGTG+SS +L+ L D +KIDK Sbjct: 661 GLIELEVTESAVMEDINKAMHYLQKLHSFGIKVALDDFGTGHSSLQYLKKLPIDTIKIDK 720 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 +F I +D + + + I + +L ++ VAEGVET+EQA++L + G+ +QGY YA+P Sbjct: 721 TFIDHIINDNKDQAIVESTIEMADKLGMDTVAEGVETKEQAQFLEKIGIDYIQGYYYAKP 780 Query: 502 MPLRDFPKWL 511 MP + ++L Sbjct: 781 MPFEEMLEFL 790 >UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z8Q2_PHOPR Length = 517 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 104/318 (32%), Positives = 174/318 (54%), Gaps = 16/318 (5%) Query: 216 QVSSQRFPFTINVNGPGAT--ALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREI 273 Q+ S+++ + + V A+ + + LP + + LS+ + + L+ +R S +I Sbjct: 189 QIRSEKYSYALTVGYVEASLKKVYFKQLPYATAIIITLSIFIVLLLNLSVNFRRSIKSDI 248 Query: 274 NLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLT 333 G+ EF + QP++N++S IG E+L+RW +P+ G ISP FI AE LI +T Sbjct: 249 QRGINNREFHAYYQPIVNSKSGHWIGAELLVRWLHPKHGVISPAEFIHTAESTGLINTIT 308 Query: 334 RYVMAETIRQR-HVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQ--LILEI 390 +++ ++ + + ++ INV S + +L S +P Q ++ E Sbjct: 309 LHLLERVAYEKTQIQAENDDLYISINVTASMIINSRYVTEL-ICIISKYPSLQHNVVFEF 367 Query: 391 TERDA-----LLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTA 445 TER+ L+++ + R L +K A+DDFGTG + S L++LR D+LKID++F A Sbjct: 368 TERETFSPTELVELKLGMQR-LREVGIKWALDDFGTGYAGLSTLQSLRFDILKIDRTFVA 426 Query: 446 AIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLR 505 + +DAV ++ D I +G L+ +VAEGVET EQA+Y+ G+ QGY YA+PMP Sbjct: 427 SSVTDAVTHSILDNIAEMGHTLHCTMVAEGVETAEQAEYVDDLGIEASQGYFYAKPMPFD 486 Query: 506 DFPKWLAG-SQPPPARHN 522 D+ L+G +P A H+ Sbjct: 487 DY---LSGICKPASASHS 501 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 95/254 (37%), Positives = 142/254 (55%), Gaps = 12/254 (4%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R S ++ L + EF +F QP ++ R+ +GVE LLRW + G ISP FIP+AEE Sbjct: 689 RFSLVNDLRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAEE 748 Query: 326 HHLIVPLTRYVMAETIRQRHVF-PMSSQFHVGINVAPSHFRR----GVLIKDLNQYWFSA 380 LIVP+ +V+ E+ R ++ F +G+N+A G + L++ Sbjct: 749 QGLIVPIGEWVLRESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIRP 808 Query: 381 HPIQQLILEITERDALLDVDYRIARELHR---KNVKLAIDDFGTGNSSFSWLETLRPDVL 437 H + LE+TE L + I + LH+ + L++DDFGTG SS S+L+ L + L Sbjct: 809 HLLD---LEVTENFLLKQPEITIPK-LHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTL 864 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF IGSD + II L + L +E +AEGVET EQ YLR HG H++QGY Sbjct: 865 KIDQSFVRDIGSDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYY 924 Query: 498 YAQPMPLRDFPKWL 511 +++P+P + P ++ Sbjct: 925 FSRPLPAEELPDFV 938 >UniRef50_P21514 Cyclic di-GMP phosphodiesterase yahA n=51 Tax=Escherichia RepID=YAHA_ECOLI Length = 362 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 97/247 (39%), Positives = 147/247 (59%), Gaps = 10/247 (4%) Query: 273 INLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPL 332 I+L L HEF+ + QP+ A++ G E+L+RW +P+ G I PD FIP+AE LIV + Sbjct: 113 ISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIM 172 Query: 333 TRYVMAET----IRQRHVFPMSSQFHVGINVAPSHFRRGVLIKD-LNQYWFSAHPIQQLI 387 TR +M +T + +H+ P FH+GINV+ F K+ LN + +L+ Sbjct: 173 TRQLMKQTADILMPVKHLLP--DNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLV 230 Query: 388 LEITERDAL-LDVDYR-IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTA 445 LE+TER+ + + + R I LH+ N+ A+DDFGTG +++ +L+ D +KIDKSF Sbjct: 231 LELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQ 290 Query: 446 AIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLR 505 D ++ + D I+ L ++ + +VAEGVETQEQA + GVH LQGYLY+ P+P Sbjct: 291 MASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGN 350 Query: 506 DF-PKWL 511 F +W+ Sbjct: 351 KFISEWV 357 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 94/250 (37%), Positives = 148/250 (59%), Gaps = 7/250 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R ++ G+A+HE + QP+++ ++ C G E L+RW +P +G ISP FIP+AEE Sbjct: 851 RSQLESDLRQGIARHELTVHLQPIVDGSTRLC-GAEALVRWRHPVKGLISPADFIPLAEE 909 Query: 326 HHLIVPLTRYVM---AETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKD-LNQYWFSAH 381 LI+PL R V+ E + + P ++ F + +NV+ FR+ + + L + Sbjct: 910 TGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNVSARQFRQPDFVAEVLGTLAGTGA 969 Query: 382 PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 Q+L LE+TE L DV+ I R +L R V A+DDFGTG SS S+L+ L D++KI Sbjct: 970 NPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYLKRLPLDLVKI 1029 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + +D ++ + I+AL + L++++VAEGVET Q +L+ HG QGYL+ Sbjct: 1030 DQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFG 1089 Query: 500 QPMPLRDFPK 509 +P+PL F + Sbjct: 1090 RPVPLEAFER 1099 >UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJT4_ALKOO Length = 504 Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 138/257 (53%), Gaps = 23/257 (8%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 ++ ++ L + EFEL+ QP +++ + + +G+E LLRW NP G +SP FIP+AEE Sbjct: 252 KLELINNLHKALEKKEFELYYQPQIDSETNEIVGLEALLRWQNPTLGRVSPAEFIPVAEE 311 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKD---------LN 374 LI+P+ +V+ Q + V +N++ F + + LN Sbjct: 312 TGLIIPIGDWVLKTACAQNATWQKEGYKPIPVSVNISTIQFNEPLFVDKVVTILKETTLN 371 Query: 375 QYWFSAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETL 432 W L LEITE A+ D I L + VK+A+DDFGTG SS +L Sbjct: 372 PKW--------LHLEITESVAINDATLTINVLNRLQKIGVKIALDDFGTGFSSLGYLSKF 423 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 + +VLKID SF IG D ST+T II LG+ LN+E+VAEGVET EQ YL+ G I Sbjct: 424 KINVLKIDSSFVQDIGEDE--STITKTIIVLGKNLNMEVVAEGVETNEQLDYLKNAGCDI 481 Query: 493 LQGYLYAQPMPLRDFPK 509 +QGYL++ P+P K Sbjct: 482 IQGYLFSSPLPAGQIEK 498 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 99/252 (39%), Positives = 141/252 (55%), Gaps = 7/252 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ ++ L +EF L QP LN R+Q+ GVE L+RW+NPRQG ISP+ FIPIAEE Sbjct: 461 RLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEALIRWHNPRQGLISPNRFIPIAEE 520 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHV--GINVAPSHFRRGVLIKDLNQYWFSAHPI 383 LI + +V+ + + S + V +NV+P F++ L+ ++++ Sbjct: 521 SSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVSPRQFQQSNLVGNISRVLQETGLK 580 Query: 384 QQLI-LEITERDALLDVD---YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 L+ LEITE L D ++ +L +KLAIDDFGTG SS +L+ D LKI Sbjct: 581 PSLLELEITE-GTLADTSPQFIKVLNDLKGLGIKLAIDDFGTGYSSLGYLKHFPIDNLKI 639 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + SD N + I+ALG L I LVAEGVET+ Q +L G +QG+L++ Sbjct: 640 DRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVETERQRDFLLSIGCDEMQGFLFS 699 Query: 500 QPMPLRDFPKWL 511 QP+P K L Sbjct: 700 QPLPFDQAGKLL 711 >UniRef50_B6R9S7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R9S7_9RHOB Length = 728 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/250 (35%), Positives = 145/250 (58%), Gaps = 5/250 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ E+ + + ELF QP ++ R+ + +G E LLRWN P G ++P+VF+ AEE Sbjct: 456 VALEAELRNAIEHDQLELFYQPQIDLRTNEIVGAEALLRWNRPDYGVVAPNVFLGTAEEV 515 Query: 327 HLIVPLTRYVMAETIRQ-RHVFPMSSQF-HVGINVAPSHFRRGVLIKDLNQYWFSAH-PI 383 LI+P+ +V+ +Q + M + + +N++P+ FR+ + + L S P Sbjct: 516 GLILPIGEWVIFAACQQAKKWMDMGLETPRIAVNISPTQFRKQNVPQLLKDALVSCSLPA 575 Query: 384 QQLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 +L +EITE L D R RE+ + ++IDDFGTG SS ++L D LKID+ Sbjct: 576 DKLEIEITENIVLHGSDATVRDLREIREMGIAISIDDFGTGYSSLAYLSRYSVDCLKIDR 635 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 FT + +D N+ + I+ LG+ L++ ++AEGVET+EQA+YL+ G + QGYL+ +P Sbjct: 636 CFTRDMMTDPNNTVIIKAIVGLGKSLDLSIIAEGVETREQAEYLKDAGCEMAQGYLFGKP 695 Query: 502 MPLRDFPKWL 511 +P DF + L Sbjct: 696 VPAEDFARLL 705 >UniRef50_A6FCC1 Putative orphan protein; putative conserved domain n=1 Tax=Moritella sp. PE36 RepID=A6FCC1_9GAMM Length = 548 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 88/261 (33%), Positives = 149/261 (57%), Gaps = 8/261 (3%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 YR+ +E+N + EFE++ QP+++ +++ +G E L+RWN+P +G + PD FIP+AE Sbjct: 281 YRVHLEQELNQAIINGEFEIYYQPIIDISTEKELGFEALIRWNHPVRGLVPPDDFIPVAE 340 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW--FSAH 381 + LIVP+ ++++ + + +++ ++ + IN+AP + ++ +S Sbjct: 341 QTGLIVPIGQWIIKQVCSDLALLQINNPEYFIAINIAPQQLADNAFVHNVRSILASYSLS 400 Query: 382 PIQQLILEITERDALLDVD---YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P Q+ EITE L++ D R+ REL+ +KL IDDFGTG SSFS+L + +K Sbjct: 401 P-AQIHFEITET-TLMNADSENLRVLRELNNLGIKLWIDDFGTGYSSFSYLHKFKFYGIK 458 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 +D+SF + + + I A+G L +EL+ EG+E QA++L + G + +QGY Y Sbjct: 459 LDRSFIEGVVDSERSQKIVKGICAMGDALKLELLGEGIEHPGQAEFLLKQGCYKVQGYWY 518 Query: 499 AQPMPLRDFPKWLAGSQPPPA 519 A+PM L WLA A Sbjct: 519 AKPMSLSTLNMWLANRNENSA 539 >UniRef50_D0YY24 Putative uncharacterized protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YY24_LISDA Length = 511 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 111/335 (33%), Positives = 179/335 (53%), Gaps = 21/335 (6%) Query: 193 KRHLL--YGNGLVDSLPQ------PEDNENYQVSSQRFPFTINVNGPGA--TALAWHYLP 242 ++HLL + + V+SL Q P +++ YQ + R+ N++ + + W Y Sbjct: 163 EQHLLDKHIHACVNSLGQTIVCTGPHESQ-YQHTYHRYSENYNLHFTASFDNEIYWCYFK 221 Query: 243 TQLPLAV-LLSLLVGYIAWLATAY---RMSFSREINLGLAQHEFELFCQPLLNARSQQCI 298 LP + LL++ LA Y R S S EI G+ HEF + QP+++A++ + Sbjct: 222 YNLPYTIILLTIFSSLCLVLAHNYYHRRQSLSAEIQRGIDNHEFIGYYQPIISAKNNRWC 281 Query: 299 GVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQR-HVFPMSSQFHVGI 357 G E+L+RWN+P+ G I PD FI IAE LI +T ++ + Q+ ++ + + I Sbjct: 282 GAELLVRWNHPKAGLIPPDQFIHIAERSELIHQMTLDLIKQIALQKTYIEQLVPHSYFSI 341 Query: 358 NVAPSHFRRGVLIKDLNQYWFSAHPIQQ-LILEITERDALLDVDYRIARE----LHRKNV 412 N+ PS + L Q +Q L++E+TER+ ++ L V Sbjct: 342 NMTPSMIANTQFVTKLVQILQMNPDLQHGLVIELTEREPFSPAKLLKLKQGMDLLRSYGV 401 Query: 413 KLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELV 472 K A+DDFGTG S + L+ L D+LKID++F +DA++ ++ D I +G +L+ LV Sbjct: 402 KWALDDFGTGYSGLATLQQLSFDILKIDRTFINLSSNDAISLSILDNIAQMGHKLHCSLV 461 Query: 473 AEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 AEGVET+EQA+Y ++ G+ QGY YA+PM D+ Sbjct: 462 AEGVETKEQAQYAKKIGIEACQGYYYAKPMTFDDY 496 >UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5G1_9CHRO Length = 997 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/246 (35%), Positives = 145/246 (58%), Gaps = 5/246 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R + +E+ L + EF L+ QP ++ +++ +G E+LLRW +P G + P FIP+AE+ Sbjct: 751 RFTLEKELRRALERQEFRLYLQPQVDI-NERIVGAEVLLRWQHPSLGLVPPCAFIPLAED 809 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 LI+ + +V+ + F + FH+ +N++P + + +L Q +A Sbjct: 810 TGLIISIGEWVLQQACFFLADFQAKNPDFHLSVNISPRQLSQAEFVSNLKQIINITAVQA 869 Query: 384 QQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LEITER + DVDY + +L + L++DDFGTG SS ++L+ L + +KIDK Sbjct: 870 NSLTLEITERLIIQDVDYVSSVMSKLQDLGINLSLDDFGTGYSSLAYLKRLPLNEIKIDK 929 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 +F IG+ + ++ + + I+A+ + N+ +VAEGVET EQA +L++ G H QGYLY +P Sbjct: 930 NFVQDIGNYSNHAPLIEAILAVARHFNLTVVAEGVETIEQANFLKKRGCHFYQGYLYGKP 989 Query: 502 MPLRDF 507 PL F Sbjct: 990 QPLETF 995 >UniRef50_A6AUF8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=7 Tax=Vibrio RepID=A6AUF8_VIBHA Length = 489 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 158/271 (58%), Gaps = 10/271 (3%) Query: 238 WHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC 297 + YL + +P+ ++ L+ + R S E+ + + E +L+ QP ++A++ + Sbjct: 215 FSYLLSSIPILLVFYFLIFLVRRFIDPQRNMVS-ELKKAIRKRELKLYYQPQVDAQTGKV 273 Query: 298 IGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGI 357 G E L+RW + +G+ISPD F+P+AEE L+ LT +V+ + + H+G+ Sbjct: 274 FGYEALVRWPHKLRGFISPDEFVPVAEESGLVESLTDFVLDKACEDFSKVKLEEPIHLGV 333 Query: 358 NVAPSHFRRGVLIKDLNQYW--FSAHPIQQLILEITERDALLD---VDYRIARELHRKNV 412 NV P + +I+ + H ++ L +EITER L+D + + A +H + Sbjct: 334 NVPPGYLSDSHVIRKIENIHRTLKQHNVE-LGIEITER-QLIDSNAIQHIAALRVH--GI 389 Query: 413 KLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELV 472 ++ IDDFGTG ++ + L+ ++ D LKIDK F IG ++VNS+V I+ L L++ELV Sbjct: 390 QVLIDDFGTGQTALAVLQHMKVDYLKIDKCFVDTIGIESVNSSVLHAIVRLAGDLSVELV 449 Query: 473 AEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 AEGVET+EQA +L+ GV+I QGY YA+P+P Sbjct: 450 AEGVETKEQADHLKALGVNIHQGYFYAKPLP 480 >UniRef50_UPI000182647F hypothetical protein EcanA3_13737 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI000182647F Length = 508 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 133/513 (25%), Positives = 240/513 (46%), Gaps = 36/513 (7%) Query: 13 RNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLL 72 +NR++ I L+TL T ++ I+ + +Q+R+ + A + LD +L S Sbjct: 11 KNRVLAAGIAFLLTLVVTTTLAMINGLDNHQKRMAEQARYVQSILDSMLRDAHEASRQAS 70 Query: 73 PLIGLPCSV-AHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQ 131 L+G C+ L + + SI + + + CSS+ ++ V + LP + Sbjct: 71 ALLGKVCNFNVEKALNMLPGRYMHIYSINFIHNQHISCSSLLANKHASVT---SRLPLDK 127 Query: 132 PLLRLTI----DRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSA 187 + D ++I Q T S ++E++ DL+ Q+S Sbjct: 128 TVWMSNALSAPDISVISLISHFPQGTLYVASDLRFLLEVMGNDLII---------QVSGK 178 Query: 188 SLTVD--KRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQL 245 +L ++ L D P P + Y ++ +R P + + + L Sbjct: 179 TLNAAGLQKGSLATAQFADYEPFPAHSSLYSLAWRR---------PEMSEIIGFVTASWL 229 Query: 246 PLAVLLSL--LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEIL 303 +A +LS+ ++ + WL R S ++ + QH+ QPL+ AR+ G E+L Sbjct: 230 SIAFILSMSTIMATLTWLLALRRHSLYAQLASAIRQHQIHPHYQPLICARTNTVAGAEVL 289 Query: 304 LRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAP 361 RW++ G+I PDVFIP+AE LI+ LT ++ + + + Q F + +N++ Sbjct: 290 ARWHHAELGFIPPDVFIPVAESTGLIIDLTESLLEQVVHDLRQGGATFQPGFKLNLNISH 349 Query: 362 SHFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDYRIARELH--RKNVKLAIDD 418 +H + ++ + + + L+ EITER+ + D +A+ H R +K+A+DD Sbjct: 350 AHVVDNSFDRFIDDWAATFAELGITLVFEITERENIDISDALVAKIAHIKRSGIKIALDD 409 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG S+ +++ L PD +KID+ FT I D + D +I + +R+NI AEGVE Sbjct: 410 FGTGFSNLAFITNLNPDSIKIDRMFTRQISQDTATPLI-DCVIDMAKRMNILTTAEGVEY 468 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 Q YL+ + + LQGY +++P+ DF ++L Sbjct: 469 DYQVAYLKANEIDCLQGYFFSKPLSFSDFTRFL 501 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 89/255 (34%), Positives = 153/255 (60%), Gaps = 11/255 (4%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ +++ L +F++ QP ++ RS + GVE L+RW +P +G + P FIP+AE+ Sbjct: 611 RLLLQNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAED 670 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRR----GVLIKDLNQYWFS 379 LI PL +V+ R+ + ++ +N++P FR G++ + L + Sbjct: 671 TGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLE 730 Query: 380 AHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 A ++L LEITER ++D+++ + + R V+++IDDFGTG+SS ++L+ L L Sbjct: 731 A---ERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHAL 787 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+ F IG D+ ++ + + +IALG+ L ++++AEGVET+EQA +LR HG +QG+ Sbjct: 788 KIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFF 847 Query: 498 YAQPMPLRDFPKWLA 512 A+PMP + WL+ Sbjct: 848 IARPMPAGELTGWLS 862 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/263 (36%), Positives = 147/263 (55%), Gaps = 16/263 (6%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R S RE+ L ++EFELF QP ++ + C+G E L+RW +P +G I PD FIP+AE Sbjct: 602 RFSMERELRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQFIPVAES 661 Query: 326 HHLIVPLTRYVMA------ETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS 379 LIVP+ +V+ ++ R+ + P+ + +NV+ F RG LI+ L Sbjct: 662 TGLIVPMGAWVIRSACPHLKSWREAGMAPL----RLTVNVSVKQFERGGLIQTLESS-MR 716 Query: 380 AHPIQQLILEITERDALLDVDYRIA----RELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + +LEI +++L + + +A REL R + ++IDDFGTG SS S+L+ L Sbjct: 717 ESGVDSRLLEIEVTESVL-MQHPMASDTLRELSRMGILISIDDFGTGYSSLSYLKKLPVY 775 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + D +T I+ +G L ++ +AEGVE++EQ LRR G +QG Sbjct: 776 KLKIDRSFVTTLPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGCDEIQG 835 Query: 496 YLYAQPMPLRDFPKWLAGSQPPP 518 Y Y++P+P F W+ PP Sbjct: 836 YYYSRPLPNDTFMTWVREKSTPP 858 >UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1L5_DESAC Length = 1018 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 95/262 (36%), Positives = 150/262 (57%), Gaps = 5/262 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 RMS + + + EFEL+ QP +N + +G E LLRW++ R G + PD FIPIAE+ Sbjct: 747 RMSLAEMLREAVDNGEFELYYQPKINLKDGMVVGAEALLRWHS-RDGMVPPDRFIPIAEQ 805 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYWFSAH-PI 383 LI+P+ +V+ + Q H++ +FH+G+N++P+ F L + + A P Sbjct: 806 TGLILPIGEWVLLQACEQAHIWRQEYPEFHMGVNLSPAQFDLDYLPRLVADILKEAQLPA 865 Query: 384 QQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LEITE + D+D +I R L V+++IDDFGTG SS S+L L D+LKID+ Sbjct: 866 EALELEITEGMIIEDIDNTVQILRSLRDLGVEISIDDFGTGYSSLSYLTRLPLDILKIDR 925 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + ++ V I+AL + LN+++ AEGVET++ L H +QGY ++P Sbjct: 926 SFMFEVPDSRDSTNVVLSILALARSLNLKVTAEGVETEDHVTLLHDHRCTYIQGYFCSRP 985 Query: 502 MPLRDFPKWLAGSQPPPARHNG 523 +P+ +F +++ Q A G Sbjct: 986 LPVAEFEEFMRHRQCRCANCEG 1007 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/241 (39%), Positives = 141/241 (58%), Gaps = 6/241 (2%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 LA +FE++ QP + R Q +G E LLRWN+P +G + P FI +AEE IVP+ + Sbjct: 712 ALALEQFEVYYQPQYDMRDQTLVGAEALLRWNHPERGMVPPGDFIALAEETGAIVPIGEW 771 Query: 336 VMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITE 392 V+ + RQ + + V +N++ + FR L + L Q S P + L LEITE Sbjct: 772 VLMQVCRQNRQWMDEGLTPVRVAVNISIAQFRSN-LSQTLEQVLEQSGMPAELLELEITE 830 Query: 393 RDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD 450 + D + I EL K + ++IDDFGTG SS S+L L D LKID+SF A + + Sbjct: 831 SMLMEDEEETITLLNELKEKGLHISIDDFGTGYSSLSYLRKLPVDKLKIDRSFIAHVVHN 890 Query: 451 AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 ++ +T IIALGQ +++ ++AEGVE +EQ +L +H +I QG+LYA+PM DF + Sbjct: 891 QSDAAITGSIIALGQNMDLRILAEGVEHEEQRDFLLQHRCYIAQGFLYARPMTAEDFVRL 950 Query: 511 L 511 L Sbjct: 951 L 951 >UniRef50_A3WLN6 Putative GGDEF domain membrane associated protein, putative nucleotide cyclase/phophodiesterase box n=1 Tax=Idiomarina baltica OS145 RepID=A3WLN6_9GAMM Length = 886 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/260 (33%), Positives = 140/260 (53%), Gaps = 15/260 (5%) Query: 258 IAWLATAYRMSFSREINL------GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQ 311 A+ A R+ + ++ L + + E+F QP ++ +S+Q IGVE L RW + + Sbjct: 619 FAFFTQAMRLKYQTDLTLRNQLQVAIENQQLEVFYQPFVDLKSEQIIGVEALARWRDKQG 678 Query: 312 GWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIK 371 WI PDVFIP+AE I+PL+ ++ +IR+ + F + IN++P + G L+ Sbjct: 679 NWIPPDVFIPLAEHTGQIMPLSDLILEMSIREVAQYVAQPNFILSINLSPKQLQNGQLVS 738 Query: 372 DLNQYWFSAH----PIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSS 425 + Q AH P L E+TE + D ++ EL K+AIDDFGTG SS Sbjct: 739 QVTQL---AHKYKIPFSTLQFELTETMLVDDAKAAFKQLAELRTLGCKIAIDDFGTGYSS 795 Query: 426 FSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYL 485 S+L L D++KID+SFT + +D+ + +T+ +I++ LN + EG+E E+A Y Sbjct: 796 LSYLNDLPADIIKIDRSFTRRVLTDSSSHPITEAVISMALGLNKSITVEGIENAEEAAYF 855 Query: 486 RRHGVHILQGYLYAQPMPLR 505 R QG+ + +PMPL Sbjct: 856 ARRSCQAAQGFYFYRPMPLE 875 >UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MED7_DIAST Length = 894 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/250 (37%), Positives = 140/250 (56%), Gaps = 7/250 (2%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 +A + R ++ L + +F L QP R +GVE LLRW +P +G + P FI Sbjct: 627 VALSARARLESDLQDALREGQFLLHLQPQFT-RDGAVVGVEALLRWQHPERGLVLPAEFI 685 Query: 321 PIAEEHHLIVPLTRYVMA---ETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW 377 +AE+ LIVPL R+V+A E + + P + + +NV+ FR ++ L+Q Sbjct: 686 GVAEDSELIVPLGRWVLASACELLARWQASPRLRELSLSVNVSARQFRSPDFVEQLSQLL 745 Query: 378 F-SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 S P +L LE+TE L DV+ IA+ +L K V+ A+DDFGTG SS ++L L Sbjct: 746 LRSGAPAHRLELELTESLVLEDVEDSIAKMHQLRTKGVRFAVDDFGTGYSSLAYLTRLPL 805 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 LKID++F +G + V I+ + + L++E+VAEGVET+EQ +L HG + Q Sbjct: 806 HRLKIDRTFVHHLGESRSDDVVVQTILGMARNLDLEVVAEGVETEEQRSFLALHGCDVYQ 865 Query: 495 GYLYAQPMPL 504 GYL A PMP+ Sbjct: 866 GYLLAHPMPV 875 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 149/264 (56%), Gaps = 6/264 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R++ ++ + +F+L+ QP + S + G E LLRW++ R+G + P FIP Sbjct: 658 AITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIP 717 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AEE LI+PL ++V+ Q + P +Q V +NV+ R+ + + Sbjct: 718 LAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLA 777 Query: 379 SAHPI-QQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A Q+L LE+TE + +V+ IA+ L + V ++DDFGTG SS S+L+ L D Sbjct: 778 DAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLD 837 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + +DA ++ + +I+AL + L + ++AEGVET+EQ +L G H QG Sbjct: 838 QLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQG 897 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPA 519 YL+++P+PL F +W+ P + Sbjct: 898 YLFSKPLPLAGFEQWIGKPTAPAS 921 >UniRef50_A8VT95 Transposase IS3/IS911 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VT95_9BACI Length = 923 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 151/260 (58%), Gaps = 20/260 (7%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 TAY+ + + + EFEL QP +NA S + +G+E LLRW++ ++ PDVFIPI Sbjct: 669 TAYQFMIFNRLQTAVEREEFELHMQPQINAESGRIVGMEALLRWHH-EDSYVRPDVFIPI 727 Query: 323 AEEHHLIVPLTRYVMAETIR-------QRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQ 375 AE++ +++ + +V+ E++R + H P+S +N++ S FR ++ L+ Sbjct: 728 AEKYGIMIKIGDWVLEESMRIAASFAKRGHTVPIS------VNISGSQFRDPAILSKLDT 781 Query: 376 YWFSAHPIQQLI-LEITERDALLDVDYR---IARELHRKNVKLAIDDFGTGNSSFSWLET 431 Y L+ LE+TE L+D + R + ++ + ++++IDDFGTG SS S+L+ Sbjct: 782 YLHQTKFDPALLKLELTES-ILIDDEERCMDVLDKIRNRGIRVSIDDFGTGYSSLSYLKR 840 Query: 432 LRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVH 491 L + LKID+SF I + N +T++II+L +L + LVAEGVE +EQ +L HG Sbjct: 841 LNVNELKIDRSFIKGIPKED-NGDITELIISLANKLKLSLVAEGVEEKEQIDFLVSHGCK 899 Query: 492 ILQGYLYAQPMPLRDFPKWL 511 +QGY Y +PMP+ D L Sbjct: 900 TIQGYYYYKPMPVSDIEDLL 919 >UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=B4SIA4_STRM5 Length = 538 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 145/503 (28%), Positives = 236/503 (46%), Gaps = 66/503 (13%) Query: 40 NLNQQRVVQFANHAVEELDK-------VLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAK 92 ++ QQR+ A A+ D+ L +AG+ V PCS H+ R Q Sbjct: 35 SVEQQRLRDIAGRALRRSDQSYHDALAALKSAEAGAHV-------PCSPDHIQ-RMQTLV 86 Query: 93 LQT--VRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLI 150 + T + +G + GTL C+S + LA++ P+ D +G+ + + Sbjct: 87 MTTPSIDQMGYFEGGTLRCTSWGPF--------LADVKQPKA------DHVTSEGAGIAV 132 Query: 151 QWTPAAGSSNAGVMEMINIDLLTA--MLLEPQL-------PQISSASLTVDKRHLLYGNG 201 P A +G ++++I L A +L++P+ P + A + D R L +G Sbjct: 133 DVRPEA----SGRRQVLSI-LYGAYDVLVDPRRFVDVIADPNVRLALASPDGRLLAKQDG 187 Query: 202 LVDSL-------PQPEDNENYQVSSQRFPFTINVNGPGATALA-------WHYLPTQLPL 247 + +L P + N ++ R + + TALA W Y+P L + Sbjct: 188 MDPALLETLLRNPGEGLDHNTLYATARNGEWLAIATTPRTALAATFRQQAWLYVPLGLLM 247 Query: 248 AVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWN 307 A + + G + WL+ R+S E+ + + E L QP++ + C+G E L+RW Sbjct: 248 AAVGA---GLVIWLSR-RRLSLRGELATAIRRRELYLHYQPIIELDTGICVGAEALIRWQ 303 Query: 308 NPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSHFRR 366 + PD+FIP+AEE +I +T V+ +R R + H+ IN+A Sbjct: 304 RQDGTQVRPDLFIPLAEETGMIGAITDLVIENVVRDMRELLVADRSAHIAINLAAEDISS 363 Query: 367 GVLIKDLNQYWFSAHPI-QQLILEITERDAL-LDVDYRIARELHRKNVKLAIDDFGTGNS 424 G +K + ++ + + QQ+ +E TE L LD + + R +AIDDFG G S Sbjct: 364 GRALKLIAKHMAGSGILPQQIWMEATEHGFLDLDRARTMLAQARRAGHSVAIDDFGVGFS 423 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 S +LE L D LKIDKSF AIG+++ S VT II + + L + +VAEGVET+ Q Y Sbjct: 424 SLQYLEQLPLDALKIDKSFIDAIGTESATSPVTPHIIDMAKELGLWVVAEGVETEAQLAY 483 Query: 485 LRRHGVHILQGYLYAQPMPLRDF 507 L V QG+L+++P+P +F Sbjct: 484 LHTRKVEFAQGWLFSRPLPRDEF 506 >UniRef50_B1YM22 Diguanylate cyclase/phosphodiesterase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YM22_EXIS2 Length = 680 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 91/236 (38%), Positives = 145/236 (61%), Gaps = 7/236 (2%) Query: 281 EFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAET 340 EF L QP + + + E+L+RWN+P+ G+ISP FIP+AE++ LI LT++V+ ET Sbjct: 434 EFNLVYQPKIALATGKVEQAEVLIRWNHPKFGFISPAEFIPLAEKYSLIHRLTQWVLQET 493 Query: 341 IRQRHVFPMSSQF--HVGINVAPSHFR---RGVLIKDLNQYWFSAHPIQQLILEITERDA 395 ++Q V+ F V +N++ HFR ++IK++ + QL LEITE Sbjct: 494 VKQMEVWREEDHFIRQVSVNLSAMHFRSESHNLMIKEIVHHSLKNGGELQLQLEITETSV 553 Query: 396 LLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVN 453 + +++ + EL + ++ +A+DDFGTG SS + L+ L D+LKIDKSF + D Sbjct: 554 MENLERALLMLGELKQLSLTIALDDFGTGLSSLTHLKHLPIDILKIDKSFIDEVPHDERG 613 Query: 454 STVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPK 509 + +T++II L + L IE+VAEGVET EQ ++L+R G QGY Y++P+ ++D + Sbjct: 614 TAITEMIIQLAKSLGIEVVAEGVETLEQHEFLKRLGCDYGQGYYYSRPVKVKDLDQ 669 >UniRef50_A1U2T3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Marinobacter RepID=A1U2T3_MARAV Length = 725 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 92/255 (36%), Positives = 143/255 (56%), Gaps = 5/255 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 TA R+S R++ L L ++E +F QP + +RS + +G+E L+RW +P +G + P F+P+ Sbjct: 461 TANRLSLERDLRLALERNELRVFYQPQVCSRSNRVVGLEALVRWQHPERGLLYPGDFLPL 520 Query: 323 AEEHHLIVPLTRYVMAETIRQ--RHVFPMSSQFHVGINVAPSHFRRGVLIKDL-NQYWFS 379 AEE L+ L+ V+ + R R + S + +N++PS ++ L N+ Sbjct: 521 AEETRLVGKLSEQVIDQACRDVGRWISSGHSDLRLAVNLSPSQVEHPRFVETLMNRVAAH 580 Query: 380 AHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L +EITE + D++ R +EL V++AIDDFGTG SS ++L L L Sbjct: 581 NFPADNLEIEITENVIMNDLEQISRKLKELAATGVRIAIDDFGTGYSSLNYLHRLPIHTL 640 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 K+D+SF AI S + + + IIA+ L +E+VAEGVET +Q YL+ G H +QG+ Sbjct: 641 KVDQSFVKAIRSGEDGACIVNAIIAMAHGLKLEIVAEGVETDDQLAYLKSLGCHQVQGFF 700 Query: 498 YAQPMPLRDFPKWLA 512 Y P D + LA Sbjct: 701 YGPARPAADITRLLA 715 >UniRef50_B1KEW5 EAL domain protein n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KEW5_SHEWM Length = 541 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 16/295 (5%) Query: 247 LAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 L+++LS L W R+S + GL EF F QP+++ RS Q +G E+L+RW Sbjct: 243 LSLVLSSLGAIFYWQWQQRRVSLESMLVNGLKNSEFTPFYQPIIDTRSHQIVGQEMLVRW 302 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRR 366 + P+ FIP AE+ LI+P+T +A+ R P + + +N+ H + Sbjct: 303 RRSDGNLVLPNQFIPYAEDSGLIIPITESTLAQVKRD---IPKLLGW-ISVNIVAEHLEK 358 Query: 367 GVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHR---KNVKLAIDDFGTGN 423 G+L + L++ + Q+L E+TER + + D I E+ R + +DDFGTG Sbjct: 359 GLLSQWLDRN--ESCDTQRLCFELTERKPIENFDKAII-EIERLVFQCQGFKLDDFGTGF 415 Query: 424 SSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAK 483 FS+L+ L + +KIDK F IG+D + + V IIA G +E++AEGVETQ QA Sbjct: 416 GGFSYLQKLGFNCIKIDKMFIDTIGTDDLKAGVLKSIIAFGHESKMEMIAEGVETQIQAD 475 Query: 484 YLRRHGVHILQGYLYAQPMPLRD----FPKWLAGSQPPPARH--NGHITPIMPLR 532 YL GV++ QGYLY+QP+ L + + ++L + A H + +T PL+ Sbjct: 476 YLSERGVYLHQGYLYSQPVGLDELLHFYDRYLNKEKAHEASHKASSKLTGRFPLK 530 >UniRef50_Q5ZVH1 Rtn protein n=5 Tax=Legionella RepID=Q5ZVH1_LEGPH Length = 532 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/281 (34%), Positives = 149/281 (53%), Gaps = 15/281 (5%) Query: 247 LAVLLSLLVGYIAWL----ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEI 302 + +L+ L+ +I + R S I L + EF QPL + ++ GVE+ Sbjct: 254 ITILIVLICSFILYALIKNMMTKRYSLQGAIKLAIKNEEFYPVYQPLFDCDEERFTGVEV 313 Query: 303 LLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAP 361 LLRW N I PD FI AE LIVP+T ++ ++ R + S FH+ N++ Sbjct: 314 LLRWENEDSQIIMPDFFIAEAEATGLIVPITLQIIEIAFKEFRSLLEERSYFHLAFNISA 373 Query: 362 SHFRRGVLI----KDLNQYWFSAHPIQQLILEITERDALLDVDYRI---ARELHRKNVKL 414 HF V K + +Y S H Q+I EITER+ L D +EL + L Sbjct: 374 LHFTDSVFFNQFHKLIEKYNISPH---QIIFEITERELLDKNDTTFINKMQELRQTGFSL 430 Query: 415 AIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAE 474 A+DD+GTG++S S+L+ + LKIDK F AIGS+ + ++ D II + + LN+ +AE Sbjct: 431 AVDDYGTGHASISYLQHFPFNYLKIDKLFVQAIGSNDIIESLNDAIIQMAKGLNLVTIAE 490 Query: 475 GVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQ 515 GVET++QA YL +GV + QG+ Y++ + + + L G + Sbjct: 491 GVETKDQANYLANNGVRLQQGWYYSKGLSIAELTALLKGEK 531 >UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodopseudomonas palustris RepID=Q07J13_RHOP5 Length = 891 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/235 (37%), Positives = 139/235 (59%), Gaps = 5/235 (2%) Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 ++ + +H+F++ QPL++ RS Q +G E LLRW +P +G +SP F+P+AEE LI Sbjct: 638 DLKRAVVEHQFDVHFQPLVDLRSDQVVGCEALLRWRHPTRGMVSPAEFVPVAEEIGLIDE 697 Query: 332 LTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVL-IKDLNQYWFSAHPIQQLILEI 390 L +V+AE+ R+ +P + V +NV+P FRR +K S P Q+L LEI Sbjct: 698 LGEWVLAESCREAATWP--AHMTVAVNVSPIQFRRRTFPLKVAAALGQSGLPAQRLELEI 755 Query: 391 TERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIG 448 TE + D D +A EL VK+A+DDFGTG SS S+L D +KID+SF A + Sbjct: 756 TEAVLIRDDDAALAILHELRALGVKIALDDFGTGYSSLSYLHRFPFDKIKIDRSFVATLA 815 Query: 449 SDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 + ++T+ ++++ + +AEGVET +Q L++ G +QGYL++ P+P Sbjct: 816 EEKASATIVQAVVSIAAAGDKITLAEGVETIQQRDLLKQFGCQQMQGYLFSPPVP 870 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 93/255 (36%), Positives = 146/255 (57%), Gaps = 13/255 (5%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ E+ + FEL+ QP + S Q IG+E LLRW +P+ G+ISP F+PIAE+ Sbjct: 670 RVHLRNELQKAIETEAFELYFQPKIEGCSGQVIGLEALLRWQHPQMGFISPATFVPIAED 729 Query: 326 HHLIVPLTRYVMAETIRQ-RHVFPMS-SQFHVGINVAPSHFRRGVLIKD----LNQYWFS 379 I+PL+++V+ RQ R + + V +N++ FRR +K L +Y Sbjct: 730 TGQIIPLSQWVLETACRQLRDLLQQGIAAPSVAVNISTVQFRRINFVKSVQSALQKYQLK 789 Query: 380 AHPIQQLILEITERDALLDVDYRIARELHRKN---VKLAIDDFGTGNSSFSWLETLRPDV 436 + + L +EITE + L D + +L R V ++IDDFGTG SS S+L+ L D Sbjct: 790 S---EHLEIEITE-NVLFDNTEKAIEKLQRLKELGVNISIDDFGTGFSSLSYLKELPIDT 845 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 +KID+SF I +D+ ++ +T II++ L + +VAEGVET++Q K+L++ QGY Sbjct: 846 VKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEGVETEQQFKFLQQSNCDQYQGY 905 Query: 497 LYAQPMPLRDFPKWL 511 +A+PMP ++L Sbjct: 906 YFAKPMPFEALKQYL 920 >UniRef50_A0KF89 EAL domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KF89_AERHH Length = 455 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/257 (38%), Positives = 141/257 (54%), Gaps = 13/257 (5%) Query: 260 WLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG-WISPDV 318 W YR S + GLA+ EF F QP++++RS Q +G E LLRW R G I P Sbjct: 196 WGLRNYRRSLKGLLQAGLARREFVPFYQPVVDSRSLQVVGFEALLRWQ--RGGDLIPPGA 253 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFP-MSSQFHVGINVAPSHFRRGVLIKDLNQY- 376 FI AEE LI+P+T ++ + I P ++ V +N+ +H L L Q+ Sbjct: 254 FIDYAEEQQLILPMTSQLLEKVIAD---LPRLAPGQWVSVNIVAAHLEHPHLRNLLLQHG 310 Query: 377 WFSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 W S QL E+TER + D+ + L ++ +DDFGTG F++L+ L Sbjct: 311 WPSP---AQLTFELTERKPITDIKTAVIEITALQQQGYHFKLDDFGTGYGGFAYLQRLGI 367 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 +KIDK F IG+D + +V D IA G+ +E++AEGVE Q+Q YL++HGVH++Q Sbjct: 368 RQIKIDKMFVDTIGTDDLKRSVLDATIAFGRESGMEMIAEGVERQDQVDYLQQHGVHLIQ 427 Query: 495 GYLYAQPMPLRDFPKWL 511 GY+YAQPM L WL Sbjct: 428 GYVYAQPMALTKLKIWL 444 >UniRef50_C9PIA5 Rtn protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PIA5_VIBFU Length = 510 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/264 (35%), Positives = 147/264 (55%), Gaps = 11/264 (4%) Query: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 LPL++L L++G+ ++ YR S I + + EF F QP++++R+ +G E+LL Sbjct: 235 LPLSLLAGLVMGFGYFMVRHYRNSIEGLIEMAIRDDEFVPFYQPVVDSRTGHIVGFEVLL 294 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHF 364 RW + WI+P FI +AE LI+ +T+ ++ + + + + + V IN+ H Sbjct: 295 RWQRGHE-WIAPSQFIHVAESSGLIMKITQQLIQQVVED--IPKLQPEQWVSINLVAEHV 351 Query: 365 RRGVLIKDLNQY-WFSAHPIQQLILEITERD---ALLDVDYRIARELHRKNVKLAIDDFG 420 L LN W AH IQ EITER+ LL D I R + R IDDFG Sbjct: 352 ETVALHDTLNALNWPYAHQIQ---FEITEREPIKNLLMADDMIQRLIQR-GYHFKIDDFG 407 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 TG FS+L+ L+ D +KIDK F I + + + + IIA + N+E++AEGVET Sbjct: 408 TGYGGFSYLQQLQIDSIKIDKMFIDTIDTTDIKRNILESIIASAHKANVEVIAEGVETTS 467 Query: 481 QAKYLRRHGVHILQGYLYAQPMPL 504 Q YL + GV+++QG++Y +PMP+ Sbjct: 468 QVAYLAKRGVYLIQGFVYYRPMPI 491 >UniRef50_Q5QW01 Intracellular signaling protein (GAF,PAS,GGDEF,EAL domains) n=1 Tax=Idiomarina loihiensis RepID=Q5QW01_IDILO Length = 766 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 88/252 (34%), Positives = 143/252 (56%), Gaps = 8/252 (3%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 Y+++ +I LAQ +FELF QP++ + Q G E L+RW +P +G++SP FIP+A Sbjct: 507 GYKVALRTKIQEALAQEQFELFYQPIMTDKGQ-VAGAEALIRWQHPTKGYVSPADFIPVA 565 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW--FSAH 381 E I+P++ +V+ + R + V +N +P F R + F Sbjct: 566 ERTGQIIPISEWVLKQACRDLQQLKLYGIKSVSVNFSPIQFYREDFVSKTKAILEQFDIK 625 Query: 382 PIQQLILEITERDALLDVDYRIA---RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P ++ +EITE + L++ RIA ++L + +AIDDFG+G +S +L L + LK Sbjct: 626 P-GEITVEITE-NVLVNDTQRIAELLQQLRDLGLDVAIDDFGSGFASLRYLNMLPVNKLK 683 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF I ++ N+ +T I+++ + IE VAEGVE +E+ YL HG H +QG+L+ Sbjct: 684 IDRSFIENIHENSHNAAITCGILSMVAGIGIETVAEGVEKEEECAYLVEHGCHFMQGFLF 743 Query: 499 AQPMPLRDFPKW 510 ++P PL + KW Sbjct: 744 SKPKPLGELLKW 755 >UniRef50_Q2L0M3 Putative signaling protein (Fragment) n=1 Tax=Bordetella avium 197N RepID=Q2L0M3_BORA1 Length = 519 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 135/455 (29%), Positives = 217/455 (47%), Gaps = 25/455 (5%) Query: 69 EVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSS--IFGYRNVPVVDILAE 126 +++LPL+ C+ A L + RS+ L+Q YC++ + N P E Sbjct: 69 DMMLPLLRGTCAEARPVLVRTLNTKPYFRSLLLLQGQQPYCATNLVVARANTP--SWRWE 126 Query: 127 LPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISS 186 P P LRL ++ P L+ A+G + +++ L ML S Sbjct: 127 AP-PGRWLRLVDGMPFMRERPALL--VGASGHGGRRAVAVVDGQYLQEML-------DSV 176 Query: 187 ASLTVDKRHL-LYGNGLVDSLPQPEDNENYQVSSQRF-----PFTINVNGPGATALA-W- 238 A+L + + G G + S P + ++ + F P +I V P + + W Sbjct: 177 AALGGHRVEFKMQGGGNLLSRPAVAGGDEGVMAREAFTSAGVPVSIEVMLPESEVIKEWT 236 Query: 239 HYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCI 298 L LPLA+L+S L+ + + S +I + EF + QP+ +++S +C Sbjct: 237 RILIGFLPLALLVSCLMVWALRHLQLQQTSVQDQIRRAMRAGEFHMEYQPIYSSKSGRCE 296 Query: 299 GVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGIN 358 G E L+RW +P G ISP+VFI AE IVPLTR+ + + + + FH+ +N Sbjct: 297 GAEALMRWRHPGAGAISPEVFIAAAEAEGAIVPLTRHALGLIAQDLPQMNLPAGFHLSVN 356 Query: 359 VAPSHFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDYRIA--RELHRKNVKLA 415 +A H + D+ + P L+LE+TER + D ++ R + V +A Sbjct: 357 LAAEHLLHREFVSDVAAFAARIAPWSPHLVLELTERSLVEDAAQALSNIRAVRTSGVSIA 416 Query: 416 IDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEG 475 IDDFG+G S ++L+ D LK+DK+F I + S + D+I+AL +RL +E+VAEG Sbjct: 417 IDDFGSGYCSLAYLQQFPVDYLKVDKTFIVGIENAQQESPILDMILALARRLELEVVAEG 476 Query: 476 VETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 V T+ Q YL V +QG+L A+PM + F W Sbjct: 477 VSTRGQLDYLLARDVAYVQGFLVAEPMRAQVFADW 511 >UniRef50_Q1Z8P6 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z8P6_PHOPR Length = 507 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/246 (35%), Positives = 136/246 (55%), Gaps = 6/246 (2%) Query: 273 INLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPL 332 I LGL EF F QP++++ S+Q +G EIL+RW ISP++FIPIAE + I L Sbjct: 253 IYLGLKNKEFIPFYQPIIDSSSKQVVGCEILVRWIKKNGEIISPNLFIPIAEYNGQIFEL 312 Query: 333 TRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ--QLILE 389 T ++ + F + F+V +NV P +++ + H I+ + E Sbjct: 313 TYDLLNQVSADIGKFALKHPDFYVSLNVVPEQLEDDNFAENVFK-ILKNHNIEANHIAFE 371 Query: 390 ITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 +TER ++ R+ +L + + + +DD GTG FS+L+ L D LKIDK F I Sbjct: 372 VTERTPFTNLKKAERVINQLKNQKIDIKLDDAGTGYGGFSYLQELPIDTLKIDKMFVETI 431 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 G++ V S + II G+ ++++AEGVE+QEQ YL G+ ++QGY YA+PMP +F Sbjct: 432 GTNDVKSKILSSIILFGKNAGLKMIAEGVESQEQVDYLNLKGITLMQGYYYAKPMPFEEF 491 Query: 508 PKWLAG 513 ++ G Sbjct: 492 TRYYYG 497 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 149/257 (57%), Gaps = 7/257 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R + ++ GLA+ E ++ QP+++ R++ +GVE L+RW +P +G ISP FIP Sbjct: 572 AVNARSNLEADLRQGLARGELCVYYQPVVDHRAR-LLGVEALVRWRHPVRGMISPADFIP 630 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ---FHVGINVAPSHFRR-GVLIKDLNQYW 377 +AE+ LI+PL + V+ Q + Q V +NV+ FR+ G + + L Sbjct: 631 LAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQ 690 Query: 378 FSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 ++L LE+TE L DV+ IAR +L R+ V A+DDFGTG SS S+L+ L D Sbjct: 691 GCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLD 750 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+ F + +D ++ + I+AL Q L++E+VAEGVET Q +LR HG QG Sbjct: 751 QVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQG 810 Query: 496 YLYAQPMPLRDFPKWLA 512 YL+ +P P+ D +L+ Sbjct: 811 YLFGRPGPVEDIDAYLS 827 >UniRef50_B6ASC2 GGDEF EAL domain-containing protein n=2 Tax=Leptospirillum RepID=B6ASC2_9BACT Length = 404 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 145/262 (55%), Gaps = 9/262 (3%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + + +R+ F E + L+ E L QP +N + Q +GVE L+RWN+P QG++ P FI Sbjct: 123 IKSRHRLRF--EFDRALSNGELVLHYQPQVNMTTGQVVGVEALVRWNHPDQGFLLPAAFI 180 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 + E+ LI PL R+VM E + Q++ + + +N+ HF G L DL + Sbjct: 181 DVVEKSELIAPLGRFVMEEALSQQNRWKQGGLALQISVNIGARHFLSGSLHADLERVIAR 240 Query: 379 --SAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 +HP + +E+TE +AL D+ + R+ + H + +++DDFGTG +S S L+ L Sbjct: 241 HNGSHPAT-IEIEVTETEALRDLFHAQRVIEQCHGLGIIVSLDDFGTGETSLSVLQNLSV 299 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 +KID+ F I + +IA+G+ + +++V EG+ET+E ++ R G + Q Sbjct: 300 GEIKIDQEFVRGIAESQKKQAIASGLIAIGRIMQLKVVVEGIETEEAGLFMIRMGCELAQ 359 Query: 495 GYLYAQPMPLRDFPKWLAGSQP 516 GY A+PMP P+W+A +P Sbjct: 360 GYGIARPMPAEAIPEWIASWKP 381 >UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U286_MARAV Length = 692 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 143/250 (57%), Gaps = 4/250 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R +++ LA HEF L QP +N +++ IG E LLRW +P G I PD+FIP+AE Sbjct: 431 RKQMEKDLAQALANHEFHLVYQPQINLETRRVIGAEALLRWEHPEHGMIPPDLFIPVAEA 490 Query: 326 HHLIVPLTRYVMAETIRQRHVFPM-SSQFHVGINVAPSHFRRGVLIKD-LNQYWFSAHPI 383 + IV + ++V+ + Q + + + +N++ R+ ++ D LN P Sbjct: 491 NGSIVEIGQWVLDQACWQAARWASEGTHLRIAVNLSAVQLRQESIVDDILNTLKRHNIPA 550 Query: 384 QQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 +L LE+TE + ++ +A+ LHR + +A+DDFGTG SS ++L+ + LKIDK Sbjct: 551 GRLELEVTETSFMTNLTDAVAKLHRLHRAGISIAVDDFGTGYSSLTYLKQMPVQHLKIDK 610 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 F + + ++ + + II LG+ LN+ +VAEGVET EQ YL + G + QGY +++P Sbjct: 611 QFIRDLLINEEDTRIANTIIDLGKSLNLTVVAEGVETAEQEYYLSQRGCALAQGYFFSKP 670 Query: 502 MPLRDFPKWL 511 + RDF ++ Sbjct: 671 LLPRDFANFV 680 >UniRef50_C9YG65 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YG65_9BURK Length = 823 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/258 (38%), Positives = 142/258 (55%), Gaps = 17/258 (6%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T R + ++ LAQ+E ELF QP++ S VE LLRW +P++G ISPD FIP+ Sbjct: 554 TQGRRTLEVDLRRALAQNELELFYQPIVTMGSAAVSHVEALLRWRDPQKGLISPDTFIPL 613 Query: 323 AEEHHLIVPLTRYVMAETIRQR---HVFPMSSQFHVGINVAPSHFRRGV----LIKDLNQ 375 AEE LIV + +V+ E+ RQ H + + V INV+ RG+ + + L++ Sbjct: 614 AEETGLIVEMGVWVLEESCRQLAAWHKAGLDAHVGVAINVSGRQVPRGLSLACITETLSR 673 Query: 376 YWFSAHPIQQLILEITERDALLDVDYRIAREL---HRKNVKLAIDDFGTGNSSFSWLETL 432 Y Q+ EITE LLD +A L ++L IDDFGTG SS S+L+ L Sbjct: 674 YGLDG---SQVSFEITE-SVLLDGSGTVAEWLSGVRNLGIRLMIDDFGTGYSSLSYLKHL 729 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDI---IIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + LKIDKSF + ++ N + II++ L + ++AEGVET EQA +L R+ Sbjct: 730 QAAALKIDKSFVWGVAGESENKEDQSLVLAIISMAHSLGLPVIAEGVETNEQADWLLRNQ 789 Query: 490 VHILQGYLYAQPMPLRDF 507 QGYLY +P+P +F Sbjct: 790 CDFAQGYLYGRPLPAENF 807 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 143/251 (56%), Gaps = 7/251 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ E+ + E F QP ++ + +G E L+RW +P +G +SPD FIP+AE Sbjct: 1081 RLTVLSELREAIPAGELRTFFQPEIDLANGTLVGAEALVRWQHPTRGLLSPDQFIPVAES 1140 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFS-AHP 382 + LI+ ++ +V+ +T R + + Q VG+N+A HFR L+ + P Sbjct: 1141 NDLIIAISDWVLEDTCRHLAQWKKADQAPITVGVNLAARHFRDPRLVPRVKSLLCRYGVP 1200 Query: 383 IQQLILEITERDALLDVDYR---IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 L LE+TE LLD D + + +EL L+IDDFGTG SS S+L+ L LKI Sbjct: 1201 GSSLQLELTE-STLLDADAQTMIVLQELIALGCSLSIDDFGTGYSSLSYLKNLPIATLKI 1259 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I DA + T++ ++ALG L ++++AEGVET+EQ + L G QGYL++ Sbjct: 1260 DQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAEGVETEEQRRILLEQGCDFGQGYLFS 1319 Query: 500 QPMPLRDFPKW 510 +P+ ++F KW Sbjct: 1320 RPLSSKEFIKW 1330 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/267 (34%), Positives = 147/267 (55%), Gaps = 11/267 (4%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 L R+ ++ L + E L QP ++ +S + +GVE LLRW +P +G ++PDVFI Sbjct: 603 LTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFI 662 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRG----VLIKDLN 374 P+AE+ LI+ + + + Q ++ S + +N++ F++ +L L Sbjct: 663 PVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILA 722 Query: 375 QYWFSAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETL 432 +AH ++ LEITE A+ D + I R L V+LAIDDFGTG SS S+L+ Sbjct: 723 ATGVAAHLLE---LEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLF 779 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 + LKID+SF I +D+ ++ + IAL L E+VAEGVET+ Q ++LR I Sbjct: 780 PVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDI 839 Query: 493 LQGYLYAQPMPLRDFPKWLAGSQPPPA 519 LQGY +++P+ +LA ++ PPA Sbjct: 840 LQGYFFSEPLSAAGIASYLAANRRPPA 866 >UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KBF3_PSEF5 Length = 641 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/246 (37%), Positives = 145/246 (58%), Gaps = 5/246 (2%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L + EF L QP ++ S +G E L+RW P+QGWISP++FIP+AE+ LI ++++ Sbjct: 387 ALERREFHLHYQPKIHLASGNVVGAEALIRWQRPQQGWISPELFIPVAEDSGLITRISQW 446 Query: 336 VMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDL-NQYWFSAHPIQQLILEITE 392 V+ E RQ + + + IN++ + FR+ L++ L + +A L LEITE Sbjct: 447 VLGEATRQCRAWQNAGLPPVPLSINLSAADFRQPQLLQQLRDALSDNALDPAWLELEITE 506 Query: 393 RDALLDVDYRIARELHRK--NVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD 450 L +V+ +A L K V+LA+DDFGTG SS S+L DVLKID+SF + + Sbjct: 507 GVLLQNVEVTLATLLAIKALGVRLAVDDFGTGYSSLSYLRKFPVDVLKIDQSFIHGLSHE 566 Query: 451 AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 ++ + II LG+ LN++++AEGVET +Q +L++ G QGY +++ +P DF + Sbjct: 567 HKDAVLVSAIINLGRSLNLKVIAEGVETHQQLTFLQQQGCEEAQGYYFSKALPAEDFARL 626 Query: 511 LAGSQP 516 L +P Sbjct: 627 LGKHRP 632 >UniRef50_Q1LPF0 EAL-containing signal transduction protein n=3 Tax=Burkholderiaceae RepID=Q1LPF0_RALME Length = 530 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 149/521 (28%), Positives = 241/521 (46%), Gaps = 43/521 (8%) Query: 24 LVTLASTLSVRFISQRNLNQQR---VVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCS 80 L T+ L+ +++++++ ++ + FAN A+ + V A L G PCS Sbjct: 17 LATVVPVLTSLYVAKKDVERRERAEIKDFANKAIMRAEVVTSQAFAALNDLDQQPGAPCS 76 Query: 81 VAHLPLRKQAAKL----QTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRL 136 +L + AA++ + V+ G DG CS + G +V D+ LP P Sbjct: 77 PPNL---EHAARVIYNYRYVQDAGAYADGLYLCSPLLG--DVRAKDL--TLPPPDYQNNE 129 Query: 137 TIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAM-LLEP--------QLPQ--IS 185 + SP+ + N ++ID + + L++P Q+P + Sbjct: 130 GYSMWFRRKSPLSNERNDLQIGRNG---RYVSIDRGSYVDLIDPAKRPIAAIQIPTGTLI 186 Query: 186 SASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS-SQRFPFTINVNGPGAT-ALAW-HYLP 242 + S D +L N S D NY V+ S + V P ++ A W L Sbjct: 187 AVSTGADPGDML--NAWKQSGNVKSDEWNYAVAQSSTRQIAVVVKSPRSSIAGNWPKLLA 244 Query: 243 TQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEI 302 L + V L+G++A+ +++ SF + +++ + ++ QP++ +C+GVE Sbjct: 245 AWLSIGVTAGALLGWLAYKRISWQFSFPATLEWAISRRKIDVVYQPIIRIADNECVGVEA 304 Query: 303 LLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAP 361 L RW Q ISP+VF+ +AEE++LI LT V+ +TI Q + + F+V INV+ Sbjct: 305 LTRWTLHGQS-ISPEVFVRVAEENNLIQSLTDVVLEKTIAQLGKMLVANPTFYVSINVSS 363 Query: 362 SHFRRGVLIKDLNQYWFSAHPI----QQLILEITERDALLDVDYR-IARELHRKNVKLAI 416 R ++ LNQ S +Q+ +E TER + + R + + I Sbjct: 364 EDLRS---VRFLNQLTSSLAGTGIAPRQIRIEATERSFMNTEETRGVIAAFRAAGHPIYI 420 Query: 417 DDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGV 476 DDFGTG SS S+L++ DVLKIDKSF I D +S V IIA+ + +E+VAEGV Sbjct: 421 DDFGTGYSSLSYLQSFEIDVLKIDKSFVDTIEQDTASSVVAPHIIAMAHDMGLEIVAEGV 480 Query: 477 ETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 E+ Q +L GVH QG+ YA+ M WL+ P Sbjct: 481 ESAVQIAWLLERGVHYAQGWYYAKAMTASTLAPWLSRVHAP 521 >UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=cellular organisms RepID=A4XXL0_PSEMY Length = 711 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 149/264 (56%), Gaps = 9/264 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R +++ LA ++ L QP ++ R + +GVE LLRW +P+ G+++PD+FIP+AE+ Sbjct: 446 RRELEKDLRDALALNQLHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVAPDLFIPLAEQ 505 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVL---IKDLNQYWFSA 380 + I+P+ +++ +T RQ + + + IN++ L + +L Q + Sbjct: 506 NGTIIPIGEWILDQTCRQLREWHDQGFTDLRMAINLSTVQLHHAELPRVVNNLMQVY--R 563 Query: 381 HPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P + L LE+TE + D+ L R +AIDDFGTG SS S+L++L D +K Sbjct: 564 LPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIK 623 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 IDKSF + D ++T+ II LG+ L ++++AEGVET EQ Y+ G H QGYLY Sbjct: 624 IDKSFVQDLLEDEDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAQGCHEGQGYLY 683 Query: 499 AQPMPLRDFPKWLAGSQPPPARHN 522 ++P+P R+ +L ++ A N Sbjct: 684 SKPLPARELTLFLKQARRLSAAAN 707 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 90/256 (35%), Positives = 144/256 (56%), Gaps = 5/256 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + + Q +F L+ QP + +S + +G E LLRW +P+ G ISP+ FIP+AEE Sbjct: 532 RIELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEE 591 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQY-WFSAHP 382 +I+ + +V+ E Q + + S V +N++P FR ++ + + + Sbjct: 592 TGVIIEIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIK 651 Query: 383 IQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 + L LEITE + D+D I ++L K + LAIDDFGTG SS S+L+ LKID Sbjct: 652 PEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKID 711 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF I +D ++++T +IAL +N+++VAEG+ETQEQ +L+ G + QGYLY+ Sbjct: 712 RSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSP 771 Query: 501 PMPLRDFPKWLAGSQP 516 P+ F + P Sbjct: 772 PVAKEPFDHFFTDGSP 787 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/262 (35%), Positives = 145/262 (55%), Gaps = 12/262 (4%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R ++ + L + E+ QPL+ ++ + +G E L+RW +P +GW+SP FIPIAE Sbjct: 581 RKVVEHDLRVALGTDQLEMHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAER 640 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGV----LIKD-LNQYWF 378 LIVPL R+++ + Q + + + +N++P F+ +I D L+Q F Sbjct: 641 TDLIVPLGRWILHRSCLQGRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGF 700 Query: 379 SAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P QL LEITE A+ +V+ + R+L V ++IDDFGTG SS ++L+ D Sbjct: 701 ---PPDQLQLEITEGIAMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDK 757 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF IG N+ V + I+ LG L + EGVET EQ +L+ HGV QG+ Sbjct: 758 LKIDRSFVVDIGLHPDNAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGF 817 Query: 497 LYAQPMPLRDFPKWLAGSQPPP 518 +A+ +P +F +++ P P Sbjct: 818 YFAKALPPDEFARFVREKSPWP 839 >UniRef50_B2JUW5 Diguanylate phosphodiesterase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JUW5_BURP8 Length = 529 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 135/462 (29%), Positives = 211/462 (45%), Gaps = 34/462 (7%) Query: 57 LDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYR 116 LD V+ +G L L G PC + L + + VRS+ LV + +YCSS G Sbjct: 66 LDSVISRAHSG---LATLPGRPCPLVEHRLSELQTYVLYVRSVNLVANQNIYCSSALGSI 122 Query: 117 NVPVVDILAELPAPQPLLRLTIDRALIKGSP------VLIQWTPAAGSSNAGVMEMINID 170 ++P+ L+ PA R+ +D LI G+P V+ + P S + G++ ++ Sbjct: 123 DMPLAAYLSLAPA-----RIELD--LIAGTPQQPREPVMPLYVPT--SKDTGLLYVVEAR 173 Query: 171 LLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNG 230 L L + L V L G V S + + SS R+ F+I V Sbjct: 174 YLADTLAHGVRYEAGQVVLVVSNARALDAYGEVISAESAAKWKGTRASSARWAFSIVVVA 233 Query: 231 PGA--TALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQP 288 A T W Y A+L++LL+ +A A R + L + QP Sbjct: 234 APAFVTQTHWKYGLLASAAAILVNLLIAAAYLIAFAPRRLLLSAVRRALKHGQLHFAYQP 293 Query: 289 LLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVM----AETIRQR 344 ++ +++ +GVE L+RW +PR G +SP F+ E L+ +TR+ + E +R+ Sbjct: 294 VVEIATRRIMGVEALIRWTHPRWGAVSPAAFMTEVERSSLLASVTRFALQRATEEIMRKT 353 Query: 345 HVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYR-- 402 + P+ + +NVAP R + D+ + L+LE+TER L+D R Sbjct: 354 ELRPL----RIAVNVAPMDLERKDFVADVLAVHATLPADITLVLEVTER-FLIDKHPRTD 408 Query: 403 -IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIII 461 I L + V+ AIDDFGT +S+ L D +KID F + D + I Sbjct: 409 VIFNLLKAQGVRFAIDDFGTQHSNLDLLGRFPFDYVKIDGEFVRQV--DKQGGELIRAIA 466 Query: 462 ALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 A+ + +E++AEGVETQ Q + LR G+ QGYLY +P+P Sbjct: 467 AVSKHYGMEVIAEGVETQAQHEALRSLGIPYGQGYLYQRPVP 508 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/244 (38%), Positives = 139/244 (56%), Gaps = 6/244 (2%) Query: 280 HEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAE 339 +EF L QP ++ + Q +G+E L+RW++P G I P FIP+AEE LI PL+ +V+ E Sbjct: 790 NEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLRE 849 Query: 340 TIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDAL 396 RQ + V +N++ F++ + K + Q + Q L LE+TE + Sbjct: 850 ACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIM 909 Query: 397 LDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNS 454 + + ++ ELH + LAIDDFGTG SS S+L+ D LKID+SF + IG + + Sbjct: 910 RNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDE 969 Query: 455 TVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA-G 513 T+T IIAL LN++++AEGVET Q +L+ +QGY +A+P+P P L G Sbjct: 970 TITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQRG 1029 Query: 514 SQPP 517 SQ P Sbjct: 1030 SQSP 1033 >UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88HN4_PSEPK Length = 733 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 98/254 (38%), Positives = 148/254 (58%), Gaps = 13/254 (5%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 S ++ + F L QP + AR+++ +G+E LLRW +P +G+ISP VFIP+AE+ Sbjct: 483 SLRNDLQKAIKTQSFSLHYQPQIEARTRRVVGIEALLRWEHPVRGFISPAVFIPVAEDSG 542 Query: 328 LIVPLTRYVMAETIRQRHVFPMSSQFHVGI----NVAPSHFRRGVLIKDLNQYWFSAHPI 383 I+PL+ +V+ Q + + Q GI N++P HF+ G ++ + Q S H + Sbjct: 543 QIIPLSLWVLDTACAQ--LRDLCDQGFNGISMAVNISPMHFQCGQFVECI-QAVLSKHGL 599 Query: 384 Q--QLILEITERDALLDVDYRIARELHRKN---VKLAIDDFGTGNSSFSWLETLRPDVLK 438 QL LEITE L +V+ IA LHR V++A+DDFGTG SS S+L+ L D +K Sbjct: 600 SAGQLELEITESLLLHNVEQAIA-TLHRLKDLGVRIALDDFGTGFSSLSYLKCLPIDKIK 658 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF I ++ ++ +T II++ L++ +VAEGVET Q +L R ILQGY + Sbjct: 659 IDRSFIQDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLERGRCDILQGYYF 718 Query: 499 AQPMPLRDFPKWLA 512 A+PM +LA Sbjct: 719 ARPMSHEALRTFLA 732 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 10/273 (3%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A +R + E+ + + +F L Q ++ +S + G E LLRW +P +G I P FIP Sbjct: 562 AVTHRAALETELRKAIDEQQFHLCFQVQMD-QSGRPTGGEALLRWEHPTRGTIPPASFIP 620 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AEE LIVP+ ++V+A RQ + P +S + +NV+ FR+ L Sbjct: 621 LAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLRDLLL 680 Query: 379 -SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + P +L LE+TE L D + I R EL + ++ ++DDFGTG SS ++L+ L + Sbjct: 681 QTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRLPLN 740 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + +D ++ + + I+ALG L +E++AEGVET Q ++L G QG Sbjct: 741 QLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQG 800 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPARHNGHITPI 528 YL+ +P+PL +F ++L G A NG + I Sbjct: 801 YLFGRPLPLLEFEQFLQGCD---AGANGALVDI 830 >UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XQ65_SYNP2 Length = 570 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 140/250 (56%), Gaps = 7/250 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R R++ L + E ELF QP ++ ++ G E LLRW + G+ISP +FIPIAE Sbjct: 313 RFQLERDLYRALEREELELFYQPQIDVKTGNITGAEALLRWRHHEHGFISPGIFIPIAEA 372 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW--FSAH 381 LI+ ++ +V+ Q + + V +N++ F++ L+ D+++ S Sbjct: 373 SDLIINISDWVLKTACYQNQQWTKDGFPELCVAVNLSGKQFQQPQLVDDVSKILKETSLK 432 Query: 382 PIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P QL LEITE + ++ + +LH + A+DDFGTG SS S+L+ D LKI Sbjct: 433 P-SQLELEITEGLLINNIQNAVKTLEDLHNLGLITALDDFGTGFSSLSYLKRFSLDYLKI 491 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I D + +T+ IIAL L IE++AEGVET EQ YL+ G + LQGY Y+ Sbjct: 492 DQSFVRGIPLDKDDVAITNSIIALAHSLQIEVIAEGVETIEQVNYLKSVGCNKLQGYYYS 551 Query: 500 QPMPLRDFPK 509 +P+ +DF + Sbjct: 552 RPICAKDFAE 561 >UniRef50_C7R7Z7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7Z7_KANKD Length = 887 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 153/269 (56%), Gaps = 18/269 (6%) Query: 256 GYIAWLATAYRMSFSREINL------GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNP 309 YI W + +++ + + Q++FELF QP++ + GVE L+RW +P Sbjct: 621 SYIYWHTAELNTNIDQQVAVRAQLQDAILQNQFELFYQPIM-SHDNNIGGVEALIRWKHP 679 Query: 310 RQGWISPDVFIPIAEEHHLIVPLTRYVM---AETIRQRHVFPMSSQFHVGINVAPSHFRR 366 +G++SP FIP+AE I+P++ +V+ I++ F ++S V +N +P F R Sbjct: 680 IKGYVSPAEFIPVAERTGQIIPISEWVLNRACTDIQELKRFGINS---VSVNFSPIQFYR 736 Query: 367 GVLIKDLNQYWFSAHPIQ--QLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTG 422 ++ + + H IQ ++ +EITE + D D+ + EL + + +AIDDFG+G Sbjct: 737 EDFVEKIAET-LKHHNIQPGEITVEITENVLVHDTDHITELLNELRQLGLDVAIDDFGSG 795 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 +S +L L + LKID+SFT I + N+ +T I+ + + IE+VAEGVET E+ Sbjct: 796 FASLRYLNMLPVNKLKIDRSFTGNIHQNKHNAAITRGILGMTTEMEIEVVAEGVETDEEY 855 Query: 483 KYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 +YLR H +QGYL+ +P+P+++ +W+ Sbjct: 856 QYLREHKCDFMQGYLFCRPIPIKELIEWV 884 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/262 (35%), Positives = 147/262 (56%), Gaps = 8/262 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ + L +++ L QP ++ Q+ +GVE+LLRW++P G +SP FIP+AEE Sbjct: 496 RLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWHHPELGQVSPATFIPLAEE 555 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHP 382 LI+P+ R+V+ RQ + + S HV +N++ F L L S Sbjct: 556 TGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDPGLTHHLKAVLSDSGLA 615 Query: 383 IQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 ++L LE+TE + + IA EL V+L+IDDFGTG SS + L+ D LKID Sbjct: 616 ARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDFGTGYSSLAQLKRFPLDTLKID 675 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 ++F + I +DA + +T+ IIA+ ++L++ +VAEGVET +Q +L R G ++QGY Y+ Sbjct: 676 RTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFLARCGSELIQGYFYSP 735 Query: 501 PM---PLRDFPKWLAGSQPPPA 519 P+ L F + PP A Sbjct: 736 PLAAEALHSFSRMFDSDAPPVA 757 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/252 (38%), Positives = 145/252 (57%), Gaps = 7/252 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 ++S + E+ L + EF L QP ++ R+ + + E L+RWN+ +G + P FI +AEE Sbjct: 501 KLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGLVYPGDFIALAEE 560 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSA--H 381 LIVP+ +V+ RQ + + + +NV+ F+ LI+ + + Sbjct: 561 TSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIETVATALSESGLD 620 Query: 382 PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 PI L LEITE + D+ IAR EL VKLA+DDFGTG SS S L+ LKI Sbjct: 621 PIW-LELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSALKRFPLSRLKI 679 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF A I DA + +T II+L Q+L +E++AEGVET+EQA++L G + +QGYL++ Sbjct: 680 DRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESGCNEIQGYLFS 739 Query: 500 QPMPLRDFPKWL 511 +P+ F + L Sbjct: 740 RPVEEAQFNRML 751 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/257 (35%), Positives = 145/257 (56%), Gaps = 11/257 (4%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+S +N L +FEL+ QP L+ +S + IG E L+RWN+P +G ISPD FIP+AEE Sbjct: 676 RISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEE 735 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKD----LNQYWFS 379 LIV + +V+ + Q + Q V +N++ ++ ++ + +Y Sbjct: 736 SGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREY--- 792 Query: 380 AHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L LE+TE + + + IA ++H +++++DDFGTG SS S+L+ D L Sbjct: 793 GVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKL 852 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I D ++ + II++ LN++++AEGVET Q + LR +G QGYL Sbjct: 853 KIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYL 912 Query: 498 YAQPMPLRDFPKWLAGS 514 +A+P+P+ + L S Sbjct: 913 FAKPLPVEQMTEHLLAS 929 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 95/256 (37%), Positives = 148/256 (57%), Gaps = 9/256 (3%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 + S ++ GL +H+F + QP ++ R Q+ GVE LLRW +P++G +SP FIP+AEE Sbjct: 736 ALSTDLRAGLREHQFLVHYQPQVD-REQRITGVEALLRWKHPQRGMVSPAEFIPVAEETG 794 Query: 328 LIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ 384 LI+PL ++V+ + Q V+ P ++ + +NV+ FR + D+ IQ Sbjct: 795 LILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFV-DMVMAAIKHTGIQ 853 Query: 385 --QLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L LE+TE ++ IA+ L V LA+DDFG G SS S+L+ L D LKID Sbjct: 854 PHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKID 913 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 KSF A + SD ++ + II+L Q L ++++AEGVET+ Q +L G QG+L+ Sbjct: 914 KSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCP 973 Query: 501 PMPLRDFPKWLAGSQP 516 P+P+ +F ++ G+ P Sbjct: 974 PLPIAEFEAFMQGAAP 989 >UniRef50_Q0HUI5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=Q0HUI5_SHESR Length = 697 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 104/317 (32%), Positives = 171/317 (53%), Gaps = 19/317 (5%) Query: 212 NENYQVSSQRFPFTINV---NGPGATALAWHYLPTQLPLAVLLSLLVG------YIAWLA 262 +E Y+V+ Q F T +V + P + WH L A+ + G Y A L+ Sbjct: 375 SEPYRVAGQVFHLTASVGVSSYPADGDMVWH-LIKHAESAMYHAKDQGRDQIQFYSAHLS 433 Query: 263 TAY--RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 A R+ R++ + L + +FEL+ QP + +Q GVE LLRWN P G++SP +FI Sbjct: 434 KAVSERILLERDLRIALIEKQFELYYQPKIRLADKQVAGVEALLRWNRPMHGFMSPALFI 493 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AE LI + +V+ +Q + + + +N++PS L+ D + Sbjct: 494 PLAESLGLINQIGDWVIETACQQLSAWSTQGLGEVQIAVNLSPSQLTSSTLL-DRVKLLL 552 Query: 379 SAHPIQ--QLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 + + I+ L +E+TE + + + I++ L N++L IDDFGTG SS S+L+ L Sbjct: 553 AQYAIKPNMLEMEVTESMMMHNPEEAISKLQALRELNIQLYIDDFGTGYSSMSYLKRLPI 612 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 + LK+D+SF + +D ++ V + II L +L +++VAEGVETQ Q L G I+Q Sbjct: 613 NALKLDRSFIIHMATDPRDADVCEGIIELAHKLGLDVVAEGVETQAQYDALLERGCDIIQ 672 Query: 495 GYLYAQPMPLRDFPKWL 511 GYLY++P+P+ ++L Sbjct: 673 GYLYSRPLPIEQVSRFL 689 >UniRef50_Q2BQA3 Signaling protein (CHEY,EAL,GGDEF domains) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQA3_9GAMM Length = 744 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 15/261 (5%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T RM + + A+HE + QP ++ + + G+E L+RW I PD FIP+ Sbjct: 483 THQRMLMLQGLRKAHAEHELFMVYQPQIDLNTGKINGLEALIRWKTHNGTMIPPDQFIPV 542 Query: 323 AEEHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRR----GVLIKDLN 374 AE LIV L ++M +R + + + Q +GIN++P FR + +LN Sbjct: 543 AESSGLIVQLGEWIMCSALRDLEHLENRYALGLQ--MGINISPVQFRHPNFLNTIKTELN 600 Query: 375 QYWFSAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETL 432 ++ S + ++ EITE A++D+D A +++H ++AIDDFGTG S S+LETL Sbjct: 601 KFNLSRNQVE---FEITESVAMMDIDTVRATLKQIHDLGAQVAIDDFGTGFSCLSYLETL 657 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D LKIDKSF + ++ + + ++II LG+ L++ ++AEGVETQEQ L+ Sbjct: 658 HFDRLKIDKSFIDKMSNENAGTYIPEMIINLGRDLDMSVIAEGVETQEQVSRLKGLNCFE 717 Query: 493 LQGYLYAQPMPLRDFPKWLAG 513 QGY + +PM ++ WL G Sbjct: 718 AQGYFFGKPMDMKSLEIWLDG 738 >UniRef50_UPI0001C377AD response regulator/GGDEF domain/EAL domain-containing protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C377AD Length = 316 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/250 (37%), Positives = 138/250 (55%), Gaps = 13/250 (5%) Query: 271 REINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIV 330 + + L + ++E LF QP ++ + + +GVE L+RW P ISPDVF+PIAE HLI Sbjct: 65 KALALAIEKNELHLFYQPKIDLATGKIMGVEALIRWIKPDGTIISPDVFVPIAENSHLIG 124 Query: 331 PLTRYVMAETIRQRHVFPMSSQFHV--GINVAPSHFRRGVLIKDLNQYWF-----SAHPI 383 ++ +V+ E RQ ++ ++ IN A + F + DL F S Sbjct: 125 KISDFVLNEGCRQNKMWQKMGYPNIVMSINFASTDFYQ----TDLKDKVFEALAKSGLDA 180 Query: 384 QQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 Q L +E+TE AL DV++ I++ +L VKLA+DDFGTG SS S+L+TL +LK+D+ Sbjct: 181 QWLEVELTETLALSDVNFAISQMNKLRELGVKLAMDDFGTGYSSLSYLQTLPITLLKLDR 240 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF I D + + +I + + IE +AEG+E Q Q LR G QGYLY +P Sbjct: 241 SFITDIEHDNIAYEIVSAVIRIAKSKKIETIAEGIENQVQESILRMAGCDYAQGYLYGKP 300 Query: 502 MPLRDFPKWL 511 MP D K+ Sbjct: 301 MPPSDIQKFF 310 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/261 (37%), Positives = 143/261 (54%), Gaps = 9/261 (3%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCI-GVEILLRWNNPRQGWISPDVFIPI 322 A R ++ L FEL Q ++AR C+ G E LLRW +P++GWI+P FIP+ Sbjct: 790 AARAELEVDLREALRLGAFELHYQAQVDARG--CVSGAEALLRWQHPQRGWIAPASFIPL 847 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKD-LNQYWF 378 AEE LI+PL +V+ Q + P ++ + +NV+ FR+ L Sbjct: 848 AEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFRQADFAAQVLAAIER 907 Query: 379 SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S ++L LE+TE L ++D I + L + ++DDFGTG SS ++L+ L D Sbjct: 908 SGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSSLAYLKRLPLDE 967 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 +KID+SF + DA ++++ I+ALGQ LN+E+VAEGVET Q +L HG QGY Sbjct: 968 IKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFLAEHGCQAYQGY 1027 Query: 497 LYAQPMPLRDFPKWLAGSQPP 517 L+ +P P R F W AG P Sbjct: 1028 LFNRPQPARQFEAWGAGHPCP 1048 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/256 (37%), Positives = 143/256 (55%), Gaps = 8/256 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + + ++E L QP + A S + G E L+RW +P G + P FIPIAE+ Sbjct: 835 RLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPAQFIPIAED 894 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW--FSAHP 382 LIVPL +V+ E RQ+ + S VG+N++ FRR + + Q A+P Sbjct: 895 SGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRRADFVDSVVQVLAETGANP 954 Query: 383 IQQLILEITERDALLDVD---YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 +++ LEITE AL+D R REL + LA+DDFGTG SS ++L+ L LKI Sbjct: 955 -ERIELEITE-SALMDASDALSRRLRELANMGLSLALDDFGTGYSSLAYLKRLPIGRLKI 1012 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + D ++ VT ++L + L +E+VAEGVET Q +L G H LQGYLY+ Sbjct: 1013 DRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTLQGYLYS 1072 Query: 500 QPMPLRDFPKWLAGSQ 515 +P+ + F W+ ++ Sbjct: 1073 RPLDVAAFEAWMQATE 1088 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/253 (35%), Positives = 143/253 (56%), Gaps = 9/253 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 RMS ++ L + ++EFEL+ QP + S Q +G E L+RW++P++G ++P FI IAEE Sbjct: 352 RMSLETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWHHPQRGLLTPIHFIEIAEE 411 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFH---VGINVAPSHFRRGVLIKDLNQYWFSAHP 382 LIV + ++V++E RQ + + F + +N++ F + D+ ++ Sbjct: 412 TGLIVAIGQWVISEACRQHQAW-LQEGFQPMRISVNISAMQFYQSDFC-DMVEHILKETR 469 Query: 383 IQ--QLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 I L E+TE + D D R +L R +KLAIDDFGTG S+ S+L D LK Sbjct: 470 INPAYLEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTGYSNLSYLRKFPIDRLK 529 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 +D+SF I + +N + I+AL + +++ELVAEGVET + + G +QGY + Sbjct: 530 VDQSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVELHWAESSGCTFVQGYRF 589 Query: 499 AQPMPLRDFPKWL 511 +QP+P F +W+ Sbjct: 590 SQPLPAEKFTRWV 602 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 88/245 (35%), Positives = 143/245 (58%), Gaps = 9/245 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + L + EF L+ QP+++ ++ Q IG E LLRW++P QGWISP FIPIAEE Sbjct: 426 RLEVESSLRKALEKQEFYLYYQPIISFKTSQLIGFEALLRWHHPTQGWISPATFIPIAEE 485 Query: 326 HHLIVPLTRYVMAETIRQRHV----FPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH 381 LIV L ++V+ E Q + FP S V +N++ + ++ + + + Sbjct: 486 TGLIVSLGQWVLQEACHQISIWQSHFPFSEPLKVSVNISSFQLNQMDFVEQVKKVLEESK 545 Query: 382 -PIQQLILEITERDALLDVD---YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 QL LEITE + +++ +++ + L + VK++IDDFGTG SS ++L+ L D+L Sbjct: 546 IKASQLNLEITETVIMNNIESTSFKL-QCLQKLGVKISIDDFGTGYSSLNYLQQLPIDIL 604 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + S+ + + II LG L +E +AEG+ET EQ ++ GV QG++ Sbjct: 605 KIDRSFVRRLESNPSEFQIIEAIIKLGNILGMETLAEGIETSEQYNLIQSLGVDYAQGFI 664 Query: 498 YAQPM 502 +++P+ Sbjct: 665 FSKPL 669 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/268 (35%), Positives = 150/268 (55%), Gaps = 8/268 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ R + L + EFEL QP++ A + + +E+LLRW +P G +SP FIP+AEE Sbjct: 819 RLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFIPLAEE 878 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHV---GINVAPSHF-RRGVLIKDLNQYWFSAH 381 LI P+ +V+ + RQ + HV IN++ F ++G++++ + Sbjct: 879 TGLIRPIGDWVIRQACRQLAEWDCLG-LHVPRLAINLSARQFEQQGLIMQVAGALAEAGI 937 Query: 382 PIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 +L LE+TE + + ++ EL V+L+IDDFGTG SS S+L+ D LKI Sbjct: 938 AAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTLKI 997 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + D N+ + + I+A+ ++L+ +VAEGVET+ QA +L G +LQGYL++ Sbjct: 998 DRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFS 1057 Query: 500 QPMPLRDFPKWLAGSQPPP-ARHNGHIT 526 +P+P + P +L P P R G I Sbjct: 1058 RPLPAAELPAFLQQRSPQPLTRERGAIV 1085 >UniRef50_B8EE65 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=6 Tax=Gammaproteobacteria RepID=B8EE65_SHEB2 Length = 744 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 5/260 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 AY + + + ++ + QP + ++ + +GVE L RW P + P FIPIA Sbjct: 484 AYHFELLQALQHSITCNDIHIALQPQVCIKTGEVVGVEALARWTLPNGQNVPPLDFIPIA 543 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWFSAH 381 E LI L + ++ + + + +G+N++ F + ++ L Q+ A Sbjct: 544 EATGLITQLGEQLFVQSCQALCALNEAGYTNLCMGVNLSAMQFEQENIVDILKQHIADAK 603 Query: 382 -PIQQLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P +Q+ +E+TE A+ ++ + EL K +++AIDDFGTG SS ++L L D +K Sbjct: 604 VPPKQIEIEVTESIAMQNFEIIRKQLNELRSKGIRIAIDDFGTGFSSLAYLSKLTFDRIK 663 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 IDKSF + SD + + D II LGQR ++ ++AEGVET+EQAK+L G H QGY Y Sbjct: 664 IDKSFIDNVTSDDGAAAIVDSIILLGQRFHMNVIAEGVETKEQAKWLSDRGCHDAQGYFY 723 Query: 499 AQPMPLRDFPKWLAGSQPPP 518 A+PMPL + WL Q P Sbjct: 724 AKPMPLPELLTWLKNYQKTP 743 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/252 (35%), Positives = 151/252 (59%), Gaps = 7/252 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R + ++ GLA+ E ++ QP+++ +++ +G E L+RW +P++G I P FIP Sbjct: 593 AVNARSNLEADLRQGLARAELLVYYQPVVDHQAR-LMGAEALVRWRHPQRGMIGPADFIP 651 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRR-GVLIKDLNQYW 377 +AE+ LI+PL +YV+ Q + P ++ + +NV+ FR+ G + + L+Q Sbjct: 652 LAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQFRQPGFVAQVLHQLK 711 Query: 378 FSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 ++L LE+TE L D++ IAR +L + V A+DDFGTG SS S+L+ L D Sbjct: 712 SHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSLSYLKRLPLD 771 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+SF + +D ++ + I+AL + L++++VAEGVET Q +L+ HG QG Sbjct: 772 QIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQLHGCEGFQG 831 Query: 496 YLYAQPMPLRDF 507 YL+ +P+P+ F Sbjct: 832 YLFGRPVPMEVF 843 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/261 (37%), Positives = 143/261 (54%), Gaps = 4/261 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + + L ++EF L QP+++ R Q IG E LLRWNNP G +SPD FI IAEE Sbjct: 1077 RLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEE 1136 Query: 326 HHLIVPLTRYVMAETIRQRHVF-PMSSQFHVGINVAPSHFRRGVLIKDL-NQYWFSAHPI 383 LI L +V+++ ++ + S V +N++P FR L++ + N + Sbjct: 1137 TGLISELGAWVISQACQEVVNWQTQGSPIWVAVNLSPRQFRESKLLEIISNAITLNGITN 1196 Query: 384 QQLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LEITE+ L D I +LH + +L+IDDFGTG S+ S+L + LKID+ Sbjct: 1197 HYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDR 1256 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF A I + + IIA+G L ++++AEGVET EQA L G QGY +++P Sbjct: 1257 SFIADIPHNQEVLALVKTIIAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRP 1316 Query: 502 MPLRDFPKWLAGSQPPPARHN 522 + +F ++L Q P A N Sbjct: 1317 LLSEEFRRYLQSHQNPQAAIN 1337 >UniRef50_Q1LCJ1 EAL-containing signal transduction protein n=3 Tax=Proteobacteria RepID=Q1LCJ1_RALME Length = 529 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 157/542 (28%), Positives = 249/542 (45%), Gaps = 55/542 (10%) Query: 12 RRNRMIVCTICALVTLASTLSVR---FISQRNLNQQRVVQ---FANHAVEELDKVLLPLQ 65 +R+ +V TI L TLA+ V F++Q N++ Q FA+ A + V+ Sbjct: 2 QRSWFLVVTIV-LTTLATLFPVGIGVFMAQLEANRREADQLSVFADAATRRAELVMTQAI 60 Query: 66 AGSEVLLPLIGLPCSVAHL-PLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDIL 124 + + L PC+ A+L LR+ ++ G+ + G CS++ G P+ Sbjct: 61 NALQDMEMLREEPCTPANLVQLRRITYTYSYIQDAGIYRAGKRLCSALLG----PIEP-- 114 Query: 125 AELPAPQPLLRL--TIDRALIKGSP-------VLIQWTPAAGSSNAGVMEMINIDLL--- 172 +LP P P R +D + P VLI +N G+ + +D++ Sbjct: 115 GQLPLPPPDWRTPDGLDYWFDQPVPFNAQRHVVLI----GRNGNNVGLDSQVFVDVVDRE 170 Query: 173 TAML--LEPQLPQISSASLTVDKRHLL-------YGNGLVDSLPQPEDNENYQVSSQRFP 223 + ML ++ +I SA+ + L YG+G Q +D S+ P Sbjct: 171 SRMLAVVQTDAGRIFSATQGANLTRLQQAYSEHSYGSGA--DAAQEDDASIVLRKSRNMP 228 Query: 224 FTINVNGPGATALA-WH-YLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHE 281 + V P A LA W L L + + + +G + W R S E+ + +HE Sbjct: 229 LAVVVLAPRAALLANWKSLLIGGLVVGLSAGVPLGILVWRRATRRFSLEGELRSAVRRHE 288 Query: 282 FELFCQPLLNARSQQCIGVEILLRWNNPRQG-WISPDVFIPIAEEHHLIVPLTRYVMAET 340 + QP+ + +GVE L+RW R G + P++FIP+AE LI +T V+ Sbjct: 289 MAVHYQPIASLADNHWVGVEALVRWR--RNGRLVRPNLFIPMAENAGLIQQITDQVLDII 346 Query: 341 IRQRHV----FPMSSQFHVGINVAPSHFRRGVLIKDLN-QYWFSAHPIQQLILEITERDA 395 + + FP F+V INV + + LN + S QQ+ +E TER Sbjct: 347 LSELGTLLRRFP---SFYVSINVGVEDLKSRRFLSVLNARLRGSGIAPQQIRIEATERGF 403 Query: 396 LL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNS 454 L DV + + IDDFGTG SS S+L++ + D LKIDKSF IG +A +S Sbjct: 404 LEPDVARDTIQAFRDAGHPVYIDDFGTGYSSLSYLQSFKVDALKIDKSFVDTIGQEAASS 463 Query: 455 TVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 TV IIA+ Q L ++++AEG+E + QA +LR GV QG+L+ +PMP + + + + Sbjct: 464 TVAPHIIAMAQSLGLQVIAEGIEDKMQADFLREQGVDYGQGWLFGRPMPAVELAQLMTRA 523 Query: 515 QP 516 P Sbjct: 524 TP 525 >UniRef50_B6BJN9 Sensory box sensor/ggdef/eal domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BJN9_9PROT Length = 642 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/241 (37%), Positives = 142/241 (58%), Gaps = 10/241 (4%) Query: 279 QHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMA 338 +EF+L+ QP ++A+S++ +G E LLRW + +G I PDVFIPI+E ++ L ++V+ Sbjct: 399 DNEFKLYYQPKVDAKSKKIVGAEALLRWIHHEKGLIGPDVFIPISESTGFMLSLGKFVIQ 458 Query: 339 ET---IRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPI--QQLILEITER 393 E+ IR+ + V IN++ F+ L +DL + S + + +QL +EITE Sbjct: 459 ESSLAIRRFSDLGYNG-LKVSINISTRQFQNTDLYQDLKE-ELSKNDVDPKQLGIEITES 516 Query: 394 DALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + + + +E+ V + IDDFGTG SS S+L+ D LKIDKSF I Sbjct: 517 IMMQHIKKTLTTLQEIKNLGVSIYIDDFGTGYSSLSYLKKFPIDTLKIDKSFVDDISEVG 576 Query: 452 VNSTV-TDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 N + + I+A+G+ L +++VAEGVE + Q YL+ HG I+QGY +A+PMP +F K Sbjct: 577 NNDEILLNTILAMGKSLGLDVVAEGVEHEYQYSYLKEHGCEIIQGYYFAKPMPEEEFIKL 636 Query: 511 L 511 L Sbjct: 637 L 637 >UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZI3_COLP3 Length = 858 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 92/249 (36%), Positives = 141/249 (56%), Gaps = 7/249 (2%) Query: 273 INLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPL 332 + L L +E EL Q ++ + + +GVE LLRW NP G +SP FIP+AEE I + Sbjct: 600 LRLALVHNELELNYQAQIHGVTGKVMGVEALLRWYNPILGQVSPAQFIPMAEELGFIAEI 659 Query: 333 TRYVMAETIRQRHVFPMSSQFHVG---INVAPSHFRRGVLIKDLNQYWFSAH-PIQQLIL 388 +V+ +QR ++ + G +N++ HF +G L+ + + P + L + Sbjct: 660 DHWVLEHACKQRKLW-LDQGLDCGRIAVNISALHFHQGNLVASVESVLAQSQLPAELLEV 718 Query: 389 EITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAA 446 EITE + +D I ++L + VK+A+DDFGTG SS S+L +L D LKID SF A Sbjct: 719 EITEGCFIKQMDKATSILKQLKKMGVKVALDDFGTGFSSLSYLTSLPIDTLKIDASFIAK 778 Query: 447 IGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRD 506 + + S +T II L Q LN+++VAEGVET+ Q +L G I+QGY Y +P+ ++ Sbjct: 779 LPHNFRESQITSAIITLAQNLNLDIVAEGVETEAQKIFLIERGCEIMQGYFYNKPVCAKN 838 Query: 507 FPKWLAGSQ 515 P+ + SQ Sbjct: 839 LPRVIQSSQ 847 >UniRef50_A0LAI5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAI5_MAGSM Length = 447 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/255 (35%), Positives = 144/255 (56%), Gaps = 4/255 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R + ++ L + E L QP ++A S + IG+E LLRWN+P G ISP FIP+AEE Sbjct: 189 RFALESRLHQVLERKELALHYQPKVDAFSGEVIGMEALLRWNSPELGTISPVRFIPLAEE 248 Query: 326 HHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH-PI 383 LIVP+ + + +Q + + V +N++P F L + Q + P Sbjct: 249 TELIVPMGAWALKTACKQAKKWLDQGHKLTVAVNLSPRQFLDKRLKDTVRQALTDSQLPP 308 Query: 384 QQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 ++L LEITE A+ DV Y + +L V A+DDFGTG SS ++L+ L D LK+D+ Sbjct: 309 ERLELEITESCAVGDVTYTVNLLNDLKSLGVTCALDDFGTGYSSLNYLKLLPLDTLKLDR 368 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF AI D ++ + +I + L +++V EGVET++QA +L+ + ILQG+L ++P Sbjct: 369 SFVMAIPEDKNDAAIVRSVIQMAHDLGLKVVTEGVETRQQAAFLKYNQCEILQGFLISRP 428 Query: 502 MPLRDFPKWLAGSQP 516 + ++F ++L P Sbjct: 429 LDAQEFGEFLLRGTP 443 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 152/271 (56%), Gaps = 9/271 (3%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 +AT RM ++ L + + EF L QP L+ RS +GVE L+RW +P +G +SP FI Sbjct: 640 IATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFI 699 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFH--VGINVAPSHFRRGVLIKDLNQYWF 378 PIAEE +I + +V+ E RQ V+ H + IN++ F L +++ Sbjct: 700 PIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHEL-L 758 Query: 379 SAHPI--QQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 +A+ + +L LE+TE ++ D I+ + L + L+IDDFGTG SS ++L+ L Sbjct: 759 AANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPI 818 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 LKID+SF I SD ++ + D+ + L +L +E+VAEGVET+ Q K+L G +Q Sbjct: 819 HTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQ 878 Query: 495 GYLYAQPMPLRDFPKWLAGSQPPPARHNGHI 525 GYL ++P+P +++ + PP + G I Sbjct: 879 GYLISKPLPADQAERFIRNN--PPMKGLGTI 907 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 145/263 (55%), Gaps = 10/263 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + L E EL QP ++ R + IG E L+RW +P+ G +SP FIP+AEE Sbjct: 827 RLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEE 886 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAH-- 381 LIVP+ +V+ RQ + + Q V +NV+ F+ L L + +AH Sbjct: 887 TGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARA-LAAHRL 945 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P QL +E+TE + + + I REL V++++DDFGTG S ++L+ D +KI Sbjct: 946 PPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKI 1005 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+ F + + A ++ + +I++L LN ++AEGVE + Q +LRRHG +QG+L++ Sbjct: 1006 DRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFS 1065 Query: 500 QPMPLRDFPKWLAGS---QPPPA 519 +P+P +F + LA Q PP Sbjct: 1066 RPLPAAEFARLLAAGTRLQRPPG 1088 >UniRef50_Q6LJ31 Putative uncharacterized protein n=3 Tax=Vibrionaceae RepID=Q6LJ31_PHOPR Length = 536 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 88/255 (34%), Positives = 137/255 (53%), Gaps = 4/255 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 RMS + GL EF + QP++N SQ G E+L RW P Q ISP FIP E+ Sbjct: 268 RMSLHSMVEQGLVNKEFIPYYQPIVNVTSQSLYGCEMLARWKRPGQELISPMEFIPYVEK 327 Query: 326 HHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSHFRR-GVLIKDLNQYWFSAHPI 383 I+P+T ++ + I + + +++ + INV P ++ + L+ S Sbjct: 328 SGQILPITEQLIKKAIDEIGKLNWQNTKQIISINVVPEQLESIEIIDRSLDLLRSSKLEA 387 Query: 384 QQLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 QL E+TER L + + + L K + + +DD GTG FS+++ L +KIDK Sbjct: 388 TQLAFEVTERKPFNNLTMAFDVIEYLRDKGIDVKLDDAGTGYGGFSYIQELNIRSIKIDK 447 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 F IG+ + ++ D IIA G++ +E++AEGVET+EQ++YL GV++ QGY + +P Sbjct: 448 MFVENIGTSDIKLSLLDSIIAFGKQAGMEMIAEGVETKEQSEYLAEQGVYLQQGYYFGRP 507 Query: 502 MPLRDFPKWLAGSQP 516 M RDF + G P Sbjct: 508 MVFRDFAYFCKGIAP 522 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 95/266 (35%), Positives = 141/266 (53%), Gaps = 19/266 (7%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+S + LA++EF L QP +N + + +GVE L+RW P++G I PD FIP+AEE Sbjct: 606 RLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEE 665 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFR--------RGVLIKDLNQ 375 LI+P+ +V+ T Q + + +Q + +N++ F RG+L + Sbjct: 666 TGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRE---- 721 Query: 376 YWFSAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + L LEITE +L+ + I+ EL + +AIDDFGTG SS S L+ L Sbjct: 722 ---TGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLP 778 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D+LKIDKSF + I + + T+ II LG + + LVAEGVE QEQ +L + Sbjct: 779 ADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEV 838 Query: 494 QGYLYAQPMPLRDFPKWLAGSQPPPA 519 QGY +++P+P L P A Sbjct: 839 QGYYFSKPLPAETLQPLLKNGTYPAA 864 >UniRef50_B5VVW5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Arthrospira maxima CS-328 RepID=B5VVW5_SPIMA Length = 852 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 140/246 (56%), Gaps = 7/246 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 ++ ++ + EF+L+ QP++N ++ Q G E L+RW +P++G++SP FIP++EE Sbjct: 593 QLQLEADLREAIKNQEFQLYYQPIMNLKTNQIAGFEALVRWISPQRGFVSPGEFIPVSEE 652 Query: 326 HHLIVPLTRYVMAETIRQRHV----FPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH 381 LI+PL +++ E RQ + + + F + IN++ F + LI+ ++Q Sbjct: 653 SGLIIPLGEWILLEGCRQLAIWNQKYCQNPPFMLSINLSTRQFSQVNLIECVDQILTQTG 712 Query: 382 PIQQLI-LEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 + I LEITE + DVD IA L +KL++DDFGTG SS S+L D LK Sbjct: 713 VDRSCIKLEITESAIMDDVDEAIALLERLKALGIKLSMDDFGTGYSSLSYLHRFPIDTLK 772 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 +D+SF + N+ + II LG LN+++VAEG+ET+ + L+ QGY + Sbjct: 773 VDQSFVRRMDDSQQNTEIVKTIIMLGHNLNMDIVAEGIETEGNVQTLKNLNCEYGQGYFF 832 Query: 499 AQPMPL 504 ++P+P+ Sbjct: 833 SKPLPV 838 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 155/272 (56%), Gaps = 17/272 (6%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R + E++ L+Q EF L QPL++ +S + E LLRW+N G +SPD F+P+AEE Sbjct: 329 RSRLADELSGALSQGEFHLVFQPLVDVKSGKVNAAEALLRWHNRYLGVVSPDQFVPLAEE 388 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAH-P 382 LI P+ +++ R+ V+ + ++ +N++P F++G ++ + + P Sbjct: 389 IGLIRPIGEWLLTAACREALVWQGMGLGEINIAVNISPRQFQQGDIVGIIRRALEDTRLP 448 Query: 383 IQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L +EITE L + + +A+ + V L++DDFGTG SS S+L++ DVLKID Sbjct: 449 PWLLTIEITEGLLLSNGEEILAKMEAIRTLGVSLSVDDFGTGYSSLSYLKSFPVDVLKID 508 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF A +G + ++T+ + IIALG L++E+VAEGVET++Q ++ G + QGY ++ Sbjct: 509 RSFIADMGDHSDDATMVEAIIALGHSLHLEVVAEGVETKQQLDFITAQGCDVAQGYYFSP 568 Query: 501 PMP---LRDF---------PKWLAGSQPPPAR 520 P+ R+F P+ +AG P R Sbjct: 569 PLSGPRFREFVLERLGLPEPEGMAGVAPHGVR 600 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 91/268 (33%), Positives = 150/268 (55%), Gaps = 15/268 (5%) Query: 260 WLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVF 319 +L R+ + ++ + EF++F QP ++ ++ Q IG E LLRW++P G I P F Sbjct: 820 FLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEF 879 Query: 320 IPIAEEHHLIVPLTRYVMAETIRQ------RHVFPMSSQFHVGINVAPSHFRRGVLIKDL 373 I +AEE LI + +V+ ET RQ +H+ P++ + +N++P G + + + Sbjct: 880 ISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPIN----LAVNLSPLQLHHGDVRQLI 935 Query: 374 NQYWF-SAHPIQQLILEITERDALLDVD---YRIARELHRKNVKLAIDDFGTGNSSFSWL 429 S P L LE+TE AL++ +I + L ++ +++AIDDFGTG SS ++L Sbjct: 936 GTILHNSGFPAHHLELELTE-SALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYL 994 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + DVLKIDK F I + + + I+A+G L + ++AEGVET+ Q ++L + G Sbjct: 995 KQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQG 1054 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGSQPP 517 QGYLY+ P+P +F + L+ PP Sbjct: 1055 CDYYQGYLYSMPLPAEEFAQLLSQQNPP 1082 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 149/261 (57%), Gaps = 14/261 (5%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A + R+ ++ L LA+ E L QP ++AR + +G E+LLRW++P+ G P FI Sbjct: 872 AASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQPPSQFIQ 931 Query: 322 IAEEHHLIVPLTRYVMAETIRQ-----RHVFPMSSQFHVGINVAPSHFRR----GVLIKD 372 + EE LI+ + +++ E + F++ +N++P FR+ G +++ Sbjct: 932 VLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQNDFVGRVLRS 991 Query: 373 LNQYWFSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLE 430 L+ Y P Q L LEITE + +++ I++ EL R V A+DDFGTG SS ++L+ Sbjct: 992 LDDYRL---PRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLK 1048 Query: 431 TLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGV 490 L D LKID+SF D ++ + I+A+ + L++ ++AEGVE EQ +L R G Sbjct: 1049 RLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGC 1108 Query: 491 HILQGYLYAQPMPLRDFPKWL 511 H+ QGYL+++P+PL +F + L Sbjct: 1109 HLYQGYLHSRPLPLPEFRQML 1129 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 92/254 (36%), Positives = 143/254 (56%), Gaps = 6/254 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T RM + L + ++ QPL+++ + Q +G+E LLRW++P G ISP FIP+ Sbjct: 616 TLERMMLENNLRNALQHDQLIIYYQPLVDS-TNQIVGMEALLRWHHPELGLISPSQFIPL 674 Query: 323 AEEHHLIVPLTRYVMAETIRQ-RHVFPMS-SQFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LIVP+ ++V+ +Q R M ++F+V +N++ FR L++ + Q + Sbjct: 675 AEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEAT 734 Query: 381 H-PIQQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L LE+TE + + IA+ L K + +IDDFGTG SS S+L+ D L Sbjct: 735 DLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTL 794 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF ++ + + IIA+ + L ++ VAEGVE +EQ +L HG H++QGY Sbjct: 795 KIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYY 854 Query: 498 YAQPMPLRDFPKWL 511 + +PMP F L Sbjct: 855 FGRPMPAEKFEDML 868 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 93/256 (36%), Positives = 141/256 (55%), Gaps = 5/256 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A A R+ E+ + E L QP ++ +G E L+RW +P G +SP FIP Sbjct: 760 AAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIP 819 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDL-NQYWF 378 +AEE LI+ L + + E RQ V+ + V +N++ F++ + + Sbjct: 820 LAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALAD 879 Query: 379 SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 ++ P Q L LE+TE + DV+ IA EL V+L+IDDFGTG SS ++L+ D+ Sbjct: 880 TSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVDL 939 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+ F + +D ++ + IIALG+ LN+ L+AEGVETQ Q YL GV +QGY Sbjct: 940 LKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGY 999 Query: 497 LYAQPMPLRDFPKWLA 512 +++P+P D +LA Sbjct: 1000 YFSRPLPAEDMATYLA 1015 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 88/255 (34%), Positives = 145/255 (56%), Gaps = 10/255 (3%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNA-RSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 Y + ++ + + EFEL+ QP ++ R+ + IG+E L+RW +P G+I PD+FI +A Sbjct: 1234 YHLRLEADLRKAIERQEFELYYQPQIDILRNDKLIGMEALIRWKHPLDGFIRPDIFIKVA 1293 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH 381 E LIV + R+V+ + Q + S F + +N++ HFR+ I+D+ Sbjct: 1294 EACGLIVDIDRWVLRQACVQGAHWAKRYGSTFKLSVNISAVHFRQPDFIEDIQSILHETQ 1353 Query: 382 -PIQQLILEITERDALLDVDYRIARE----LHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P L LEITE +L + +A++ L +++AIDDFGTG SS ++L + Sbjct: 1354 MPTASLGLEITE--GVLMKELHVAKDHLSRLKSLGIEVAIDDFGTGYSSLAYLRHFEVNT 1411 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF I ++ + + II L + L + +VAEG+ET EQ + + G +I+QGY Sbjct: 1412 LKIDRSFLIDIATNKADQAIVSSIIELARNLKLNVVAEGIETVEQLEQVFSRGCYIIQGY 1471 Query: 497 LYAQPMPLRDFPKWL 511 +A+PM + DF ++L Sbjct: 1472 YFAKPMCVADFERYL 1486 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/255 (37%), Positives = 142/255 (55%), Gaps = 6/255 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R+S + L EF L QPL+ S + +G E+L+RW P + + P FIP Sbjct: 623 AANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIP 682 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQ-YWFS 379 +AEE LIVPL +V+ E RQ + + + +N++P F R L+ + + S Sbjct: 683 LAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGS 742 Query: 380 AHPIQQLILEITERDALLDVDYRIARELH---RKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P QL LE+TE AL++ + + LH R V LAIDDFGTG SS ++L+ D Sbjct: 743 GLPPAQLELELTE-GALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDK 801 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + D+ ++ + IIA+ + L +E +AEGVET +Q +LR+ G QGY Sbjct: 802 LKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGY 861 Query: 497 LYAQPMPLRDFPKWL 511 L++ P+P F +WL Sbjct: 862 LFSPPLPAEAFERWL 876 >UniRef50_D1RIS6 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RIS6_LEGLO Length = 530 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 103/280 (36%), Positives = 154/280 (55%), Gaps = 17/280 (6%) Query: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 L L++LL L+ I L Y S I + + +F QPL +AR+ G E+LL Sbjct: 258 LVLSILLYFLLKQI--LNKYY--SLHGAIKKAIKKEQFYPVYQPLFDARNNVYSGAEVLL 313 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSH 363 RW + I PD+FI AE+ LI+P+T ++ ++ + + S FH+ N+ H Sbjct: 314 RWKYYQDTIIMPDLFIQEAEDTGLIIPITLQIVETAFKETKELLYGSPSFHLAFNLCAYH 373 Query: 364 FRRGVLI----KDLNQYWFSAHPIQQLILEITERDALLDV-DYRIARE---LHRKNVKLA 415 F + K ++QY S P Q++LEITER LLDV D ++ L LA Sbjct: 374 FTDTLFFDQFHKLVDQY--SISP-NQILLEITER-YLLDVNDKSFIKKMLALREAGYSLA 429 Query: 416 IDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEG 475 IDD+GTG+SS S+L+ + LKIDK F AIGS A+ T+ D II L +++N+ ++AEG Sbjct: 430 IDDYGTGHSSISYLQYYPFNFLKIDKIFIQAIGSKAITETLNDAIINLAKKINLTIIAEG 489 Query: 476 VETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQ 515 VET+EQ YL + VH LQG+ +++ + + L G + Sbjct: 490 VETKEQVNYLLENDVHFLQGWHFSKALSIDQLTDLLKGEK 529 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 92/269 (34%), Positives = 153/269 (56%), Gaps = 13/269 (4%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + + ++ L + + EL+ QP +NA+ QQ IGVE L+RWN+P +G + P VF+PIAEE Sbjct: 414 LEIEKGLHEALHKGQLELYYQPQVNAQ-QQIIGVEALIRWNHPEKGVLPPGVFMPIAEET 472 Query: 327 HLIVPLTRYVMAETI------RQRHVFPMSSQFH-VGINVAPSHFRRGVLIKDLNQYWFS 379 I+ + +++ + ++ V P + FH + IN++P F + ++ + Sbjct: 473 GQILQIGDWIIEQACFQYAQWKKEQVLPET--FHRLAINISPLQFSKNAFVEHITHALKQ 530 Query: 380 AHPIQQLI-LEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 A+ + I LEITE L +V+ I + EL ++K++IDDFGTG SS +L+ L DV Sbjct: 531 ANITGEHIELEITESLLLENVESAINKMAELKELDLKISIDDFGTGYSSLRYLKHLAVDV 590 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + D + + II + +RL++E++AEGVET+E+ L G QGY Sbjct: 591 LKIDRSFVTQLHLDQSDQAIVSTIIMIAERLSLEVIAEGVETEEEFNTLVELGCEQFQGY 650 Query: 497 LYAQPMPLRDFPKWLAGSQPPPARHNGHI 525 L+ +P+P+ + L S+ H+ + Sbjct: 651 LFGKPLPVEMITQKLRESRQHQESHSSKV 679 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 92/248 (37%), Positives = 140/248 (56%), Gaps = 13/248 (5%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 +AQ + + QP ++ S IG E LLRW++P G ISP FIPIAEE LI+ + + Sbjct: 613 AIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGEW 672 Query: 336 VMAETIRQR---HVFPMSSQFHVGINVAPSHFRRG----VLIKDLNQYWFSAHPIQQLIL 388 V+ + Q H + + + +N++ FR ++++ L + F P Q L L Sbjct: 673 VLRVAVAQAKKWHQLGLD-KLIIAVNLSAVQFRHAGLPNLVMQILKEEDF---PPQYLEL 728 Query: 389 EITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAA 446 E+TE A+ D IA LH + V+++IDDFGTG SS S+L+ + LKID+SF Sbjct: 729 ELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRD 788 Query: 447 IGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRD 506 I +DA + + II + + L ++ +AEGVET EQ +LR G H QGY Y++P+P D Sbjct: 789 ISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAAD 848 Query: 507 FPKWLAGS 514 F ++ G+ Sbjct: 849 FETFILGA 856 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 91/256 (35%), Positives = 145/256 (56%), Gaps = 15/256 (5%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R E+ LA+ +FELF QP ++ RS Q + VE L+RWN+P G ++P FIP AEE Sbjct: 639 RFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVGFIPTAEE 698 Query: 326 HHLIVPLTRYVMAETIRQRHVF------PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS 379 LIVP+ +V+ E RQ + P++ V +NV+ F L++ + + S Sbjct: 699 TGLIVPIGDWVLHEACRQNKAWQDLGLEPIT----VSVNVSARQFSEKNLVERV-VHALS 753 Query: 380 AHPIQQLILEITERDALLDVDYRIA----RELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 ++ LE+ ++L+ D +A +L V+++IDDFGTG SS S L+T Sbjct: 754 ESDLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTFPIA 813 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKIDKSF + ++ + V +I+LGQ+L + ++AEGVET EQ +LR++ +QG Sbjct: 814 RLKIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQG 873 Query: 496 YLYAQPMPLRDFPKWL 511 Y +++P+ R+ + L Sbjct: 874 YHFSKPVCSREIERLL 889 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 98/272 (36%), Positives = 146/272 (53%), Gaps = 17/272 (6%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 L T R +F +E EF L QP ++ + + IG+E L RWNNP G +SP FI Sbjct: 454 LETHLRKAFEKE--------EFFLHYQPQIDCVTNRIIGLEALARWNNPELGLVSPGSFI 505 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LI+ L R+V+A +Q + + V +N++ HF + L K + Q Sbjct: 506 PLAEETGLIIALDRWVLATVCKQLEAWQAAGIPLVRVAVNLSARHFLKANLNKTIQQIRS 565 Query: 379 -SAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A L LEITE + + + ++ L V ++IDDFGTG SS S+L L Sbjct: 566 RGAAARDHLDLEITEGMLMENAEEVVSVLGMLQETGVNISIDDFGTGYSSLSYLTRLPFH 625 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + G + +++V IIAL L E+VAEGVET Q ++L+ +G ++QG Sbjct: 626 TLKIDRSFISQSGDNVESASVVTAIIALAHSLGKEVVAEGVETSTQLQFLKENGCRVIQG 685 Query: 496 YLYAQPMPLRDFPKWLAGSQPP----PARHNG 523 YL+++P+P + L + P P R +G Sbjct: 686 YLFSRPLPEDKIRELLREGRIPGAVEPVREHG 717 >UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Q7_DECAR Length = 930 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 91/252 (36%), Positives = 141/252 (55%), Gaps = 9/252 (3%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 R + + L ++EF + QP +NA++ + +GVE LLRW+NP G +S FIP+AEE Sbjct: 662 FKLERMLRVALDRNEFSVVYQPQVNAKNGELVGVEALLRWHNPELGNVSAVQFIPVAEET 721 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQFH--VGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 LIV + +VM Q + F V +N++ FRR L+ + + P Sbjct: 722 GLIVSIGEWVMRAACHQARTWQTELGFEIPVAVNLSARQFRRNDLLASVQTILDETGLPN 781 Query: 384 QQLILEITERDALLD----VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L LEITE ++D +D I R L+ +K A+DDFGTG SS ++L+ + LKI Sbjct: 782 RLLELEITEGSLIVDPIGAID--IMRGLNCLGIKTALDDFGTGYSSLAYLKAFPLNRLKI 839 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D++F + + + +++ IIALG LN+E++AEGVET+ Q +L G + QGYL+ Sbjct: 840 DRAFVRDLPDNESDCAISNTIIALGLNLNMEVLAEGVETEAQRDFLAAAGCQVFQGYLFG 899 Query: 500 QPMPLRDFPKWL 511 +PM D + L Sbjct: 900 KPMSGEDLTQRL 911 >UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIE6_9GAMM Length = 711 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/253 (35%), Positives = 150/253 (59%), Gaps = 9/253 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ +++ L ++EF L QP+L+ ++ + G E LLRW+NP G ISP+ FIPIAE+ Sbjct: 459 RLQIEEQMHSALGRNEFSLRYQPVLDLKNNRIAGAEALLRWHNPVLGNISPEEFIPIAEQ 518 Query: 326 HHLIVPLTRYVMAETIR--QRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPI 383 LIVP+ +V+ ++++ ++ S++F + +N++P F+ LI + + ++H + Sbjct: 519 TGLIVPIGYFVLEQSLKAARKWSTTYSNEFTIAVNLSPLQFKDPKLIVKIKEL-LASHRL 577 Query: 384 Q--QLILEITERDALLDVDYRIA---RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 + L LEITE LL ++ +EL +++++DDFGTG SS ++L + LK Sbjct: 578 EGNALSLEITE-GVLLGNQIKVQEAFQELSDSGIQISMDDFGTGYSSLNYLREYKFQTLK 636 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF D + + IA+ L++E++AEGVE QEQ YL R G + QGYL Sbjct: 637 IDRSFMQDFALDKSAPALINATIAMAHALDVEVIAEGVEEQEQLDYLIRKGCNFAQGYLL 696 Query: 499 AQPMPLRDFPKWL 511 ++P+ +DF +L Sbjct: 697 SKPLTEQDFEAFL 709 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 88/246 (35%), Positives = 138/246 (56%), Gaps = 9/246 (3%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 ++ + E+ + L++ E LF QP +N + +GVE LLRWN+P++G I P+ FIP+AE Sbjct: 333 HKTTMEHELRMALSKEELILFYQPQVNLEGK-IVGVEALLRWNHPQKGLIPPNTFIPLAE 391 Query: 325 EHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRGVLIKDL-NQYWFS 379 E LI+P+ +V+ +Q + FP H+ INV+ F+ + + N S Sbjct: 392 ETGLIIPVGSWVLHRACQQLSEWKKDFPHQP-LHLSINVSAKQFQEASFYETVANAIALS 450 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + LE+TE L + IA+ L V ++DDFGTG SS S+L+ L D L Sbjct: 451 GSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSSLSYLKRLPLDEL 510 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF IG D ++ + II + +++++AEGVE +EQ +L +G + QGYL Sbjct: 511 KIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFLMENGCGLFQGYL 570 Query: 498 YAQPMP 503 + +PMP Sbjct: 571 FGKPMP 576 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/250 (35%), Positives = 142/250 (56%), Gaps = 7/250 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 ++ I L Q+EF L QP+++ ++ + VE LLRW +P++GWISP FIPIAEE Sbjct: 294 KLYIQHSIRKALKQNEFTLHYQPIVDIQTGDIVAVEALLRWFHPKRGWISPATFIPIAEE 353 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHV--GINVAPSHFRRGVLIKDLNQYW--FSAH 381 +LI P+ +V+ Q + HV G+NV+ F + L+K + + Sbjct: 354 TNLIQPIGDWVLRNVCEQSKKWKEKGLPHVQIGVNVSIKQFLQADLVKHIEHVLRTYDLD 413 Query: 382 PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P L LEITE A+ +DY +A+ L ++LA+DDFGTG SS ++L+ L D++KI Sbjct: 414 PFC-LKLEITESMAMHHIDYVLAQLQSLKHLGLQLAVDDFGTGYSSLNYLKKLPVDIIKI 472 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + + + ++ +I + L +++VAEGVET+EQ L+R G QGY ++ Sbjct: 473 DRSFVQDMVKHSYDLSIVRAVIQVAHSLQMKVVAEGVETEEQLAILKREGCDRAQGYYFS 532 Query: 500 QPMPLRDFPK 509 +P+ F + Sbjct: 533 KPLAAEQFEQ 542 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 85/249 (34%), Positives = 136/249 (54%), Gaps = 3/249 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ + I GL EF +F QP ++ + Q G+E L+RW P + P FIP+AE+ Sbjct: 469 RLAIEKSIRKGLENDEFVVFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLEFIPVAED 528 Query: 326 HHLIVPLTRYVMAET-IRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ 384 L+V L V+ + I+ R + +N++ F+ +L + S P Sbjct: 529 TGLVVALGERVLRDACIQTRRWTDELGPLRIAVNISARQFQPDLLDRVQAALAESGLPPS 588 Query: 385 QLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 QL LEITE + D+ +A L + + +AIDDFGTG+SS +L+ D +KID+S Sbjct: 589 QLELEITETTMMRDLPTSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKIDRS 648 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F + D ++T+ I+ +G+ L++ +VAEGVET +Q +LR HG +QGY Y++P+ Sbjct: 649 FVRDVPGDEGDATIVSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSKPL 708 Query: 503 PLRDFPKWL 511 P F W+ Sbjct: 709 PADGFADWM 717 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 92/249 (36%), Positives = 134/249 (53%), Gaps = 10/249 (4%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + GL + EF L QP++ + +G E L+RWN+P +G I+P FIP+AEE Sbjct: 564 RLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEE 623 Query: 326 HHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSHFRRGVL---IKD-LNQYWFSA 380 LIVPL +V+ RQ R + +N++ FR G L ++D L++ F Sbjct: 624 TGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGF-- 681 Query: 381 HPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P L LEITE + D D +A L V+L+IDDFGTG SS ++L+ D LK Sbjct: 682 -PAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALK 740 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF I D + + ++A+ ++ + ++AEGVET EQ +LR G QGYL Sbjct: 741 IDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLV 800 Query: 499 AQPMPLRDF 507 +P DF Sbjct: 801 GRPQAAADF 809 >UniRef50_A0JVV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVV3_ARTS2 Length = 821 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 94/266 (35%), Positives = 147/266 (55%), Gaps = 15/266 (5%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + A R+ ++ L L + E L QP++ ++ +G E LLRW++P G I PD FIP Sbjct: 551 SAAGRLDLESDLRLALGRGELSLNYQPIIEIATETPVGFEALLRWHHPVHGSIPPDTFIP 610 Query: 322 IAEEHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRGVLIKD---LN 374 +AEE LI+P+ +V+ E RQ R + F +NV+ R ++ KD L Sbjct: 611 VAEETGLILPIGTWVLEEAFRQVQEWRRELCGAENFSAAVNVSG----RQLVAKDFPDLV 666 Query: 375 QYWFSAHPIQ--QLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLE 430 + A I + LE+TE + D+ L R V L+IDDFGTG SS S+L+ Sbjct: 667 EAAILAAGIDPAAVHLEVTETVLMDQPDLPKETLHRLSRLGVGLSIDDFGTGYSSLSYLK 726 Query: 431 TLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGV 490 L LKID++F +G+D +T+ ++++ + L++ ++AEGVETQ+Q LRR V Sbjct: 727 WLSARTLKIDRTFVEELGNDPHGATIIELVLGMAGSLDLGVIAEGVETQDQLSELRRLRV 786 Query: 491 HILQGYLYAQPMPLRDFPKWLAGSQP 516 + QG+L+++P+P P WLA + P Sbjct: 787 PLAQGFLWSKPLPAERVPAWLAAALP 812 >UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 Tax=cellular organisms RepID=Q1LGY0_RALME Length = 536 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 148/278 (53%), Gaps = 14/278 (5%) Query: 238 WHYLPTQL-PLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQ 296 W + T L P LL + +A L R R+++ L E L P++ S + Sbjct: 244 WRNVATWLVPFGALLGGALVALARLGLRRRHGLLRQLDRALRDDELSLAYMPIVELESGK 303 Query: 297 CIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFH 354 IG E L+RW + Q WI+PD FIP+AE HH I LT ++ + P ++ + Sbjct: 304 WIGAEALMRWCHDGQ-WIAPDKFIPLAERHHRIRKLTNRMLDLLVADAQALPRDLARAMY 362 Query: 355 VGINVAPSHFRRGVL---IKDLNQYWFSAHPIQQLILEITERDALLDVDYRI--ARELHR 409 +N++ + + D+ Q A + +++E TE LL+ I L + Sbjct: 363 FSVNLSAEDLAACAIAQRVADVRQ----ACGVDGVMVEATE-GVLLEASRVIPNIERLRK 417 Query: 410 KNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNI 469 +++AIDDFGTG SS S+L +L D +KIDKSF +AIG+++V V II + + + + Sbjct: 418 LGIRVAIDDFGTGYSSLSYLGSLDVDYIKIDKSFVSAIGTNSVRGHVVAHIIDMAKDVGV 477 Query: 470 ELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 ++AEGVETQEQA YL GV QG+L+ + MP++DF Sbjct: 478 AVIAEGVETQEQADYLMARGVRYAQGWLFGKAMPMQDF 515 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 94/253 (37%), Positives = 141/253 (55%), Gaps = 11/253 (4%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ ++ L + EF L QP + S + +G E L+RWN+P G + P FI +AEE Sbjct: 678 LAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEER 737 Query: 327 HLIVPLTRYVMAETIRQ-----RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH 381 IV + +V+AE RQ R P + + IN++ FR+ L + Q S+ Sbjct: 738 GFIVQIGNWVIAEATRQLVEWRRAGLP---ELTLAINLSALQFRQPDLALQVKQALESSG 794 Query: 382 -PIQQLILEITERDALLDVDYRIARELHRKNV--KLAIDDFGTGNSSFSWLETLRPDVLK 438 P L +E+TE + D I + KN+ +L+IDDFGTG SS S+L+ + D LK Sbjct: 795 LPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLK 854 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF I DA +S + II + + LN+++VAEGVET EQ ++L + G +QGYL Sbjct: 855 IDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLI 914 Query: 499 AQPMPLRDFPKWL 511 A+P+P DF + L Sbjct: 915 AKPLPADDFAELL 927 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 96/256 (37%), Positives = 136/256 (53%), Gaps = 14/256 (5%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ ++ + E LF QP ++ RS + +G E LLRW +P QG I P FIP+AEE Sbjct: 496 RLTLENDLRKAMDNDELVLFYQPQVDTRSGKVVGAEALLRWMHPEQGLIPPFKFIPLAEE 555 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVA-----PSHFRRGVLIKDLNQYWF 378 LI + +V+ E +Q F S V +NV+ PS RR I D Sbjct: 556 MGLIGEMGDWVIREACKQVQTFAKKGVSLPKVAVNVSALQFTPSFTRRVKSILD----EL 611 Query: 379 SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + P L LE+TE + D + + EL V L+IDDFGTG SS S+L D Sbjct: 612 AVDP-ATLELELTEGVVMGDTNASVQALAELKDLGVSLSIDDFGTGYSSLSYLSRFPLDE 670 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + +++ IIA+ Q L +ELVAEGVET EQ +++ G H++QGY Sbjct: 671 LKIDRSFVIEANNSEQGASLVRAIIAMAQSLGLELVAEGVETDEQYEFMTTAGAHVIQGY 730 Query: 497 LYAQPMPLRDFPKWLA 512 +++QP+P LA Sbjct: 731 MFSQPVPAEKLEPLLA 746 >UniRef50_B0KTQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Pseudomonas RepID=B0KTQ2_PSEPG Length = 861 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 6/242 (2%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 YR ++ L EF L QP + +GVE LLRW +P++G + PD FIP+AE Sbjct: 602 YRRQLENDLRRALRNQEFVLHYQPRYRLGDLRIVGVEALLRWQHPQEGLLGPDTFIPLAE 661 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 + +IV L R+V+ E R H +P + V +N++P+ F R ++ D+ + +A P Sbjct: 662 QSDIIVALGRWVLREACRTAHDWP--NDVLVSVNLSPAQFLRSDVVADVREILLDTAFPA 719 Query: 384 QQLILEITERDALLDVDYRIARELHRK--NVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 Q+L LEITE L D++ + L K V+L +DDFGTG SS +L T D +KIDK Sbjct: 720 QRLELEITENVMLNDIEGALGTMLSLKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDK 779 Query: 442 SFTAAIGSD-AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 F + + ++ + V II LG+ + + + AEGVE+++Q K L + H +QGY ++ Sbjct: 780 RFISGLNNNGGSDRAVVQAIINLGEAMGLTVTAEGVESEQQLKALEKDRCHEVQGYYMSR 839 Query: 501 PM 502 P+ Sbjct: 840 PL 841 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 93/251 (37%), Positives = 137/251 (54%), Gaps = 5/251 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 +S ++ L + EF L QP L+ R + GVE LLRW +PR G I+P F+P+ E+ Sbjct: 567 LSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDT 626 Query: 327 HLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPI 383 LIVP+ +V+ Q S + + +NV+ FR L++ + Q P Sbjct: 627 GLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQVEQVLREECMPP 686 Query: 384 QQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LEITE A+ DV I L V+LAIDDFGTG SS ++L+ D LKID+ Sbjct: 687 HHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQ 746 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 +F DA + + + I+LG +L +E+VAEGVET EQ +LRR ++QG+ +++P Sbjct: 747 AFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRP 806 Query: 502 MPLRDFPKWLA 512 +P +LA Sbjct: 807 LPADALTPFLA 817 >UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Methylobacterium RepID=B1ZEQ0_METPB Length = 716 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 91/246 (36%), Positives = 133/246 (54%), Gaps = 7/246 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ RE+ LAQ FEL QPL++ + G+E L+RW +P +G ++P VFIP+AEE Sbjct: 446 RLGLERELREALAQSRFELHYQPLVDLSDNRITGMEALVRWRHPERGLVNPAVFIPLAEE 505 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFR-RGVLIKDLNQYWFSAHPIQ 384 LIVP+ +V+++ R +P V +NV+P R RG + L S Sbjct: 506 TGLIVPIGEWVLSQACRDAAAWP--DAISVAVNVSPLQLRNRGFVQSVLGALATSGLKAS 563 Query: 385 QLILEITERDALLD---VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 +L LEITE LLD V+ L R V++++DDFGTG SS S+L D +KID+ Sbjct: 564 RLELEITE-SVLLDDTEVNLETLHSLRRLGVRISMDDFGTGYSSISYLRRFPFDKIKIDR 622 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + + I++LG L I + EGVET+ Q +R G +QGYL++ P Sbjct: 623 SFVPDSAGQSDAGAIIRAIVSLGASLGITTLVEGVETEPQLATIRAEGAQEVQGYLFSPP 682 Query: 502 MPLRDF 507 P+ + Sbjct: 683 RPVHEI 688 >UniRef50_B9Z2J3 Diguanylate phosphodiesterase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2J3_9NEIS Length = 343 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/251 (38%), Positives = 146/251 (58%), Gaps = 7/251 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R S + EI GL + EF + QP++ A+S CIGVE+L RW +P QG+I +FIP AEE Sbjct: 74 RNSNNWEIAQGLRKREFFVHYQPIVTAQSGHCIGVEVLARWRHPVQGFIPSQLFIPAAEE 133 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKD---LNQYWFSAHP 382 LIV LTRY++ + + + F VG+N++ SH +I+D L H Sbjct: 134 AGLIVALTRYLLRCVGHELGQMMLPAGFVVGVNISASHLTTRDIIEDCRLLLSVLKDKHI 193 Query: 383 IQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 QL+LE++ER AL + + ++ REL V+LA+DDFG G++ +L+T D LK++ Sbjct: 194 --QLVLEVSERVALEEHEESLKVVRELKAMGVQLALDDFGAGHADRHYLQTWGFDYLKVE 251 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 K + +AIG + + D I+ +L ++++ +GVETQ Q YL G LQG+ + + Sbjct: 252 KGYVSAIGKEGFRGNILDDILVNATQLGLKVMIKGVETQGQQSYLNAKGFQFLQGFFFGR 311 Query: 501 PMPLRDFPKWL 511 PM L F +WL Sbjct: 312 PMTLNHFRRWL 322 >UniRef50_A7K0B3 Rtn protein n=5 Tax=Vibrio RepID=A7K0B3_VIBSE Length = 498 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 147/264 (55%), Gaps = 11/264 (4%) Query: 247 LAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 ++VL+ L ++ + + R S I G+ EF + Q ++++R +G E L+RW Sbjct: 238 VSVLMGLAFAFVYVSSKSLRKSIKGLIQNGINNAEFVPYYQAIVDSRDGATVGYEALIRW 297 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRR 366 + R+G +SP++FI AEE LIVP+T ++ + I+ V P V IN+ SH Sbjct: 298 SR-REGMVSPNMFIGAAEESGLIVPMTNQLIRKIIQDLSVLP--EHVWVSINIVSSHLES 354 Query: 367 GVLIKDLNQY-WFSAHPI-QQLILEITERDALLDVDYRIARELH--RKNVKLAIDDFGTG 422 G L K L++ W P +++ E+TER + D + L+ K K IDDFGTG Sbjct: 355 GELTKLLSELNW----PCPKRVHFELTERIPVKDTEAAKKEILYLANKGYKFKIDDFGTG 410 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 FS+L+ L LK+DK F IGSD V D I++ ++ E++AEGVE++ Q Sbjct: 411 YGGFSYLQDLGIRCLKVDKMFIDPIGSDDQKLKVLDSIVSAAKKAECEMIAEGVESEAQV 470 Query: 483 KYLRRHGVHILQGYLYAQPMPLRD 506 YL +H ++++QGY+YA+P P+ + Sbjct: 471 AYLAQHSIYLIQGYVYAKPEPINN 494 >UniRef50_P32701 Uncharacterized protein yjcC n=108 Tax=Enterobacteriaceae RepID=YJCC_ECOLI Length = 528 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/259 (35%), Positives = 146/259 (56%), Gaps = 10/259 (3%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 +S R++ L +H+ L+ QP+++ ++++CIG E LLRW + ++P FIP+AE+ Sbjct: 269 LSPKRKLQRALEKHQLCLYYQPIIDIKTEKCIGAEALLRWPGEQGQIMNPAEFIPLAEKE 328 Query: 327 HLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQY--WFSAHPI 383 +I +T YV+ R + +V IN++ S F LI +NQ ++ P Sbjct: 329 GMIEQITDYVIDNVFRDLGDYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRP- 387 Query: 384 QQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 QQ+ E+TE A LDVD I + ++AIDDFG G S+ L++L D+LKIDK Sbjct: 388 QQIKFEVTEH-AFLDVDKMTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDK 446 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + + + + + II L L ++ +AEGVET+EQ +LR+ GV QG+ +A+ Sbjct: 447 SFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKA 506 Query: 502 MPLRDFPKWLAGSQPPPAR 520 MP + F +W+ + PAR Sbjct: 507 MPPQVFMQWM---EQLPAR 522 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 95/247 (38%), Positives = 140/247 (56%), Gaps = 11/247 (4%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 LA+ EFE+ QP ++ S Q +G E L+RW +P +G P FI IAEE +I L + Sbjct: 405 ALAREEFEVHYQPQVDVISGQVVGAEALVRWRHPEKGLQPPANFIAIAEETGIIEGLGAW 464 Query: 336 VM---AETIRQ--RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLI-LE 389 V+ + IRQ R + + + IN++ FR+ L++ SA I LE Sbjct: 465 VLQKVCQDIRQLTRDGYRIP---RISINLSARQFRQSDLVEQCRNTIRSAGIAPAYIELE 521 Query: 390 ITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 +TE + D+D + R+L+ V+LAIDDFGTG SS + L+ D LKIDKSF I Sbjct: 522 LTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLKHFPIDTLKIDKSFVRDI 581 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 D + + I+AL + L +E+VAEGVET+EQ +L+R G I+QGY +++P+P F Sbjct: 582 PGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQGYFFSRPLPFEGF 641 Query: 508 PKWLAGS 514 ++L G Sbjct: 642 REYLKGK 648 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 13/259 (5%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + L EFEL+ QP+++ S + E LLRWNNP G + PD FIP+AEE Sbjct: 560 RLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFIPLAEE 619 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRR----GVLIKDLNQYWFS 379 LI+P+ +V+ E + + + + + + +NV+P FR +++ LN S Sbjct: 620 TGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALND---S 676 Query: 380 AHPIQQLILEITERDALLDVDYRIA---RELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + L LEITER +LD A ++L + ++L++DDFGTG S+ S+L++ D Sbjct: 677 NLRPELLELEITER-LILDNSIETADILKQLDKVGIRLSVDDFGTGYSALSYLKSYPFDT 735 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKIDKSF + + ++++ II + L +++VAEGVE ++ +L+ QGY Sbjct: 736 LKIDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQGY 795 Query: 497 LYAQPMPLRDFPKWLAGSQ 515 Y++P+P +DF WL ++ Sbjct: 796 FYSRPLPEQDFIHWLETNE 814 >UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YPN8_9CYAN Length = 1177 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 89/257 (34%), Positives = 142/257 (55%), Gaps = 9/257 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ ++ L Q EF+L+ QP++ + + G E LLRW +P+QG+ISP FIP+AEE Sbjct: 920 RLQIQTDLRFALEQEEFQLYYQPIIELSTGKIAGFEALLRWEHPQQGFISPGEFIPVAEE 979 Query: 326 HHLIVPLTRYVMAETIRQRHV----FPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH 381 +IVPL +V+ E RQ H F +S + +N++ F L + ++Q H Sbjct: 980 TGIIVPLGEWVLREACRQLHTWKEKFSLSKLLMMSVNLSSQQFTVD-LSQRVDQILQETH 1038 Query: 382 PI-QQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 + ++L LEITE + D IA EL ++ + + IDDFGTG S +L D+LK Sbjct: 1039 VLGRELKLEITETAIMADPQLAIATLNELKQREIMICIDDFGTGYCSLGYLHQFPVDILK 1098 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + + +I+ L + L ++ +AEG+ET+EQ L+ QGY + Sbjct: 1099 IDRSFVNKM-QVGDKREIVRVIVELAESLRMDAIAEGIETEEQYIQLQNLHCKYGQGYYF 1157 Query: 499 AQPMPLRDFPKWLAGSQ 515 A+P+ + +WLAG++ Sbjct: 1158 AKPLHPNEAEQWLAGTR 1174 >UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UHK4_RALPJ Length = 1183 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 84/252 (33%), Positives = 144/252 (57%), Gaps = 14/252 (5%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + +YR++ +I L Q +F L QP ++ ++ + G+E L+RW +P +G + P FI Sbjct: 919 IGVSYRLNLEHQIRATLEQGQFRLLYQPQIDTKTGRVCGLEALIRWIHPTRGLLPPAAFI 978 Query: 321 PIAEEHHLIVPLTRYVMAETIRQR---HVFPMSSQFHVGINVAPSHFRRGV----LIKDL 373 P+AEE LIV + +V+ E RQR H ++ + +NV+P F+RG L+K Sbjct: 979 PVAEESGLIVEIGNWVLTEAARQRAEWHKRGLADDLTLAVNVSPLQFKRGTVLPTLLKLQ 1038 Query: 374 NQYWFSAHPIQQLILEITERDALLDVDYRIAREL---HRKNVKLAIDDFGTGNSSFSWLE 430 QY + ++ LE+TE L++ R +L + V++AIDDFGTG SS ++L+ Sbjct: 1039 RQYGLGSGFLE---LEVTE-SMLMEGTERTIEDLTAIRQLGVRIAIDDFGTGYSSLAYLK 1094 Query: 431 TLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGV 490 L D++KID++F I D+ ++ + ++ L L +++ AEGVE Q+ +L H Sbjct: 1095 RLPIDLIKIDRAFVKDIDRDSNDAAICTTVVVLAHNLGVKVCAEGVEDAAQSAFLASHQC 1154 Query: 491 HILQGYLYAQPM 502 +LQGY +++P+ Sbjct: 1155 DVLQGYYFSEPL 1166 >UniRef50_B8K4T2 Sensory box protein/ggdef domain/eal domain n=2 Tax=Vibrio RepID=B8K4T2_VIBPA Length = 532 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 133/480 (27%), Positives = 226/480 (47%), Gaps = 45/480 (9%) Query: 50 ANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVA-HLPLRKQAAKLQTVRSIGLVQDGTLY 108 + ++ +L++ + + + L +G CS L LR + + ++ IGL +DG +Y Sbjct: 52 GSDSINKLERYIDTMADDLQTLAIKVGDDCSEQDKLALRAKVFNSRMLKEIGLYKDGIVY 111 Query: 109 CSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAG---VME 165 C+S E P+ L T+ R I SP I + S + Sbjct: 112 CTS-------------NEGPSQIRLFNSTLQR--IDASPKHITISLTESKSKLKTFFIYS 156 Query: 166 MINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNEN----YQVSSQR 221 N LL PQ + S ++R Y +++ + Q + Y SS Sbjct: 157 SSNKKRGINALLHPQ-QFLELISPVFEERKYGYQVHVLNEVIQSNQTQPGLKLYSFSSSL 215 Query: 222 FPFTINVNGPGATALAWHYLP---TQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLA 278 +P +I+V + + HYL + +A++LSLL +L Y+ R + L Sbjct: 216 YPLSISVY-LTSESYQNHYLSHVGETVSIALVLSLL-----YLMIRYQTLVKRSVEYSLV 269 Query: 279 ----QHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTR 334 Q + EL+ QP+++ S++ +G E L+RWN+P QG ISP+ FIP+AE+ +I +T Sbjct: 270 NAIHQEQIELYLQPIVDIHSRKVVGSEALVRWNHPVQGQISPEQFIPLAEKLGIIDRVTE 329 Query: 335 YVMAETIRQRHVFP-MSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHP--IQQLILEIT 391 Y E R P ++ IN++ + ++ L Y HP + +++LE+T Sbjct: 330 YAFREVTRFLKRNPDYCEHNYISINISRYQIVKPEFVEYLTNYA-KRHPKLVSRILLELT 388 Query: 392 ERDAL----LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 E L LD+ ++ ++AIDDFGTG S + + ++ DV+KID+ F ++ Sbjct: 389 ENVDLTSEQLDLALTHLTQIQSLGFEIAIDDFGTGYSGLNLIRQMKFDVVKIDQVFIKSL 448 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 SD+ V +I L L + ++AEGVET+ Q + L + GV +QG+ YA+P+ DF Sbjct: 449 HSDSNIKPVLKSMIQLATDLGMRVIAEGVETEYQIEQLEQLGVKYIQGFYYARPIKPEDF 508 >UniRef50_A4XWY6 Diguanylate phosphodiesterase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XWY6_PSEMY Length = 453 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 97/272 (35%), Positives = 154/272 (56%), Gaps = 9/272 (3%) Query: 243 TQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEI 302 Q +A++L ++ +I TA R ++ L + +F L+ QP LNA + + IG E+ Sbjct: 175 VQGGVAMVLFFVLLHILQTDTAERSELDSDLRAALRERQFVLYYQPQLNA-ANRVIGAEL 233 Query: 303 LLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ-RHVF--PMSSQFHVGINV 359 L+RW +P++G + P FI AE LI+PL ++V+ +T Q RH P+ + +N+ Sbjct: 234 LIRWQHPQRGLVGPGEFIDYAENTGLIIPLGQWVLEQTAAQLRHWSDEPLFRDIGLAVNI 293 Query: 360 APSHFRRGVLIKDLNQYWFSAHPI--QQLILEITERDALLDVD--YRIARELHRKNVKLA 415 + FR+ + ++ H I Q+L LE+TE + D++ R L V+ + Sbjct: 294 SQKQFRQPGFVAEILAL-IERHGIAAQRLELELTETLIVHDMEDLTRKMNALVEHGVRFS 352 Query: 416 IDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEG 475 +DDFGTG SS S L+ L LKID+SF + +DA + T+ +IALGQ + + ++AEG Sbjct: 353 LDDFGTGFSSLSHLKRLPLSKLKIDRSFICDVLTDANSETIVRTVIALGQSMGMTVIAEG 412 Query: 476 VETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 VET+ Q ++L +G QGYL +PMPL DF Sbjct: 413 VETEAQRRFLADNGCSQFQGYLLGRPMPLADF 444 >UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJT7_CYAP7 Length = 812 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 143/237 (60%), Gaps = 7/237 (2%) Query: 273 INLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPL 332 + L + + EF L+ QP+L+ ++ IG E L+RW +P++G ISP FIP+AEE LIV + Sbjct: 562 LKLAIERQEFLLYYQPILSLKTLTVIGFEALIRWQHPQRGLISPVHFIPVAEETDLIVAI 621 Query: 333 TRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRGVLIKDL-NQYWFSAHPIQQLI 387 +V+ ++ +Q R +P ++ + +N++ + + L N + P QL Sbjct: 622 GEWVLQQSCQQLSAWREKYPQANHLTINVNLSNRQLEKDNFVYKLDNVLQQTGLPATQLK 681 Query: 388 LEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTA 445 LEITE + ++ IA +L ++N+ ++IDDFGTG SS ++L L LKID+SF A Sbjct: 682 LEITETLLMTNLAAAIATLSQLKQRNINISIDDFGTGYSSLNYLCRLPVSSLKIDRSFVA 741 Query: 446 AIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 + D+ N + I++LG++L IE++AEG+ETQ+ + L+ G QGYL+++P+ Sbjct: 742 NVHEDSKNLQIIQTILSLGEQLMIEVIAEGIETQKHLEQLQELGCQYGQGYLFSKPV 798 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 142/258 (55%), Gaps = 9/258 (3%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R + L + +F L+ QP + + + G E L+RW +P +G + P FI Sbjct: 516 AVTLRADLEAALRTALEEEQFVLYLQPQI-SEDVRVTGAEALIRWQHPTRGLVMPGEFIA 574 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AE+ +IVP+ +V+ +Q ++ P + + +NV+ F + ++ + Sbjct: 575 VAEDCGMIVPIGNWVLNTACKQLALWATQPAFAHMTIAVNVSAKQFHQHDFVEQVLDA-L 633 Query: 379 SAHPIQQ--LILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 S H Q L +EITE + +VD I R EL V A+DDFGTG SS ++L+ L Sbjct: 634 SRHGAQASGLKIEITESMLIANVDDVIVRMEELQHHGVGFAMDDFGTGYSSLTYLKRLPL 693 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 DVLKID+SF + D ++ + ++I+AL + + ++AEGVET EQ +YL RHG H Q Sbjct: 694 DVLKIDQSFVRDVLVDTNDAAIANMIVALANSMGLSVIAEGVETVEQMQYLARHGCHAYQ 753 Query: 495 GYLYAQPMPLRDFPKWLA 512 GYL+++P+P+ F LA Sbjct: 754 GYLFSRPVPVERFETSLA 771 >UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella RepID=Q7W9Y7_BORPA Length = 524 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 101/281 (35%), Positives = 155/281 (55%), Gaps = 16/281 (5%) Query: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 L A L LLVG + + + S + I GL ++EF + QP++ + +C+G E L+ Sbjct: 251 LSAAAGLGLLVGAV--ILARRQFSLPQLIRSGLRRNEFYMVYQPMVEVGTGRCVGAEALI 308 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVM----AETIRQRHVFPMSSQFHVGINVA 360 RW I+PDVFI AE LI +T V ++ R R ++ INV+ Sbjct: 309 RWRRRNGDLIAPDVFIDEAERVGLIGKITERVFELVSSDVQRWRGRL---GDLYISINVS 365 Query: 361 PSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAID 417 + G + L++ + + Q+++E+TER ALL D +A + + + ++AID Sbjct: 366 AADMASGAAERLLSEMFARTGLTPSQVVVELTER-ALLHSDEAVAAIKIIRKMGGRVAID 424 Query: 418 DFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVE 477 DFGTG SS ++L + D LKIDK F AIG DA +S+V+ II + + L + +VAEGVE Sbjct: 425 DFGTGYSSLAYLTSFEVDGLKIDKRFVDAIGRDAPSSSVSVHIIEMAKSLGLRVVAEGVE 484 Query: 478 TQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPP 518 T Q ++L HGV QG+L+ +PMPL + LA ++ PP Sbjct: 485 TAGQQRFLSEHGVDYAQGWLFGRPMPLNEL---LAMARRPP 522 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 94/263 (35%), Positives = 145/263 (55%), Gaps = 16/263 (6%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A RM + ++ + +A +F ++ QP++ S Q E L+RW +P +G +SP FIP Sbjct: 670 AAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAEFIP 729 Query: 322 IAEEHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRGVLI---KDLN 374 +AEE LIVP+ +V + ++Q R F S F + +N +P FR + + L Sbjct: 730 LAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRS--FQISVNKSPVQFRHAESLSWPEYLE 787 Query: 375 QYWFSAHPIQQLILEITERDALLDVDYRIARELHR---KNVKLAIDDFGTGNSSFSWLET 431 Q S I I+EITE LLD + + ++L R +++AIDDFGTG SS S+L+ Sbjct: 788 QQHVSGDSI---IVEITE-GLLLDAEVEVNKKLLRFRDAGIQVAIDDFGTGYSSLSYLKE 843 Query: 432 LRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVH 491 D LKID+SF +G + + + II + +L +++AEGVET Q + L G Sbjct: 844 FDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVETSTQHELLAAAGCD 903 Query: 492 ILQGYLYAQPMPLRDFPKWLAGS 514 QGYLY++P+P +F + LAG Sbjct: 904 YGQGYLYSRPLPPEEFERQLAGK 926 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 134/241 (55%), Gaps = 24/241 (9%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L + E +F QP +N ++ + GVE LLRWN+ G I+PD FIP+AEE LIVP+ + Sbjct: 693 ALERDELIIFYQPQINYKTNKIKGVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEW 752 Query: 336 VMAETIRQ-----RHVFPMSSQFHVGINVAPSHFRRGVLIK---------DLNQYWFSAH 381 V+ E +Q +P+ S + +N++ F + L DL+ + Sbjct: 753 VLKEACKQLKEWHNQGYPLIS---MSVNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLE 809 Query: 382 PIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + LI++ TE V + +L+ V LAIDDFGTG SS +L+ L LKIDK Sbjct: 810 LTENLIVKNTE------VTLKTMTQLNGLGVNLAIDDFGTGYSSLGYLKNLPISTLKIDK 863 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + +D + +T+ II L Q L +E++AEGVET+EQA YL H++QGY +++P Sbjct: 864 SFVQEMLTDDA-AAITNTIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFSKP 922 Query: 502 M 502 M Sbjct: 923 M 923 >UniRef50_D1RM65 Sensory box protein/GGDEF domain/EAL domain protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RM65_LEGLO Length = 845 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/249 (35%), Positives = 138/249 (55%), Gaps = 5/249 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T RM E+ + L EF+LF QPL+ ++Q+ IG+E LLRW NPR G +SPD F+P Sbjct: 579 TYERMLVENELYMALENEEFKLFFQPLVELKTQKVIGLEALLRWQNPRLGLLSPDNFLPY 638 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYW-FS 379 A + L+ + +V+ E Q +++ + INV F+ L+ D+N+ Sbjct: 639 AHDLGLLTKIGTWVLNEACSQLNIWRQQGHHLIKISINVTAQQFKHAQLLHDINKALDHY 698 Query: 380 AHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 A P L +E+TE+ + + I+ REL +K + +A+DDFG G S+ + ++ D L Sbjct: 699 ALPGSCLEMELTEQTLIQGSEEVISTLRELRKKKITIALDDFGKGYSNLNRIKNFPLDKL 758 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + + N + II L Q LN+ ++AEG+E Q+Q +L + QG+L Sbjct: 759 KIDQSFISNLMYSENNKNLIKAIIYLAQTLNLSVLAEGIENQDQLNFLIANKCDYGQGFL 818 Query: 498 YAQPMPLRD 506 A+PMP D Sbjct: 819 LAKPMPSSD 827 >UniRef50_D0WXU5 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 40B RepID=D0WXU5_VIBAL Length = 507 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 146/264 (55%), Gaps = 11/264 (4%) Query: 247 LAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 ++VL L+ + + R S + I G++ EF + Q ++++R + +G E L+RW Sbjct: 247 VSVLAGLVTAFAYISGKSLRKSITGLIENGISNAEFIPYYQAIVDSRVGKTVGYEALIRW 306 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRR 366 + R G + P++FI AEE LI+P+T ++ + I+ P + V IN+ SH Sbjct: 307 SR-RDGMVPPNMFIGAAEESGLIIPMTNQLIRKIIQDLSDLPEHT--WVSINIVSSHLES 363 Query: 367 GVLIKDLNQY-WFSAHPIQQLI-LEITERDALLDVDYRIARELH--RKNVKLAIDDFGTG 422 GVL K L++ W PI I E+TER + D + L+ K K IDDFGTG Sbjct: 364 GVLTKLLSELNW----PISNRIHFELTERIPVKDTEAAKKEILYLTNKGYKFKIDDFGTG 419 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 FS+L+ L +K+DK F IGSD V D I++ + E++AEGVE+Q Q Sbjct: 420 YGGFSYLQDLGIRCVKVDKMFIDPIGSDDQKLKVLDSIVSAANKAECEMIAEGVESQAQV 479 Query: 483 KYLRRHGVHILQGYLYAQPMPLRD 506 +YL +H ++++QGY+YA+P PL + Sbjct: 480 EYLAQHAIYLIQGYVYAKPEPLTN 503 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/248 (37%), Positives = 140/248 (56%), Gaps = 11/248 (4%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L + FEL+ QPL +G E L+RW++P +G I PD FI +AE+ LI L + Sbjct: 661 SLTKEHFELYYQPLFTIDQNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDW 720 Query: 336 VMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKD----LNQYWFSAHPIQQLILE 389 V+A+ R+ F + + F V IN++P FRR L++ L Q+ SA I+ LE Sbjct: 721 VLAQACREIKNFLNAGITVFKVAINISPVQFRRKDLLQHMLMILAQHDVSAELIE---LE 777 Query: 390 ITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 ITE + +VD I + LH +LA+DDFGTG SS S+L+ +KID+SF + + Sbjct: 778 ITEGAVMDNVDQAIETMQALHDAGFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDL 837 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 +D + ++T II + L + ++AEGVET+EQ YL+ +QGY +P+P +F Sbjct: 838 ENDDDSKSITTAIIQMSHSLGLHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASEF 897 Query: 508 PKWLAGSQ 515 K + S+ Sbjct: 898 IKNFSESK 905 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/249 (36%), Positives = 134/249 (53%), Gaps = 24/249 (9%) Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L + EFEL QP ++ + +GVE LLRW +P QG ISP F+PIAEE LIVP+ +V Sbjct: 842 LERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWV 901 Query: 337 MAETIRQRHVF------PMSSQFHVGINVAPSHFRRGVL--------IKDLNQYWFSAHP 382 + E RQ ++ PM+ + +N++ F R V+ L+ W Sbjct: 902 IREACRQAMLWRRAGLRPMT----MAVNLSGRQFSRSVIEAIDEALADSGLDPRWLQVEV 957 Query: 383 IQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 + +I+E T+ Y + L + + +A+DDFGTG SS ++L+ D LKID+S Sbjct: 958 TESVIMEDTQEA------YTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRS 1011 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F I D N + D II + L I+++AEGVET+ Q YLR+ G +QGYL ++P Sbjct: 1012 FIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQ 1071 Query: 503 PLRDFPKWL 511 P +W+ Sbjct: 1072 PAAALGQWM 1080 >UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acinetobacter radioresistens RepID=C6RJR5_ACIRA Length = 855 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 141/242 (58%), Gaps = 5/242 (2%) Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 E+ L ++F LF QPL+N + GVE L+RWN+P++G+I PD+FIP+AE IV Sbjct: 606 ELMEALNDNQFNLFYQPLINPATGLAKGVEALIRWNHPQRGYIFPDIFIPLAERTGQIVA 665 Query: 332 LTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLIL 388 + ++V+ + + + SQ V +N++P FRR +++L S + L + Sbjct: 666 IGQWVLKKACMDIAEWNKTHQSQLTVSVNISPLQFRRAGFLQELEHALDISTLTPELLKI 725 Query: 389 EITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAA 446 E+TE ++ D I + + V+++IDDFGTG SS S+L L + +K+D+SF Sbjct: 726 EVTEGMVIIGADRAIEILKSIRELGVQVSIDDFGTGYSSLSYLRRLPINQIKLDRSFIEH 785 Query: 447 IGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRD 506 + ++ + II L +LN+E+VAEGVET +QA +L + G +LQGY YA+P P+ + Sbjct: 786 LTESDQDAAIVQSIIHLAHQLNLEVVAEGVETLKQAAFLYQQGCDLLQGYFYARPAPITE 845 Query: 507 FP 508 Sbjct: 846 LK 847 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/251 (35%), Positives = 140/251 (55%), Gaps = 20/251 (7%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 RM R + + +++F+L QP + S + +GVE LLRW +P G ISP VFI + E Sbjct: 385 RMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFISLIEN 444 Query: 326 HHLIVPLTRYVMAETIRQRHV-------FPMSSQFHVGINVAPSHFRRGVLI----KDLN 374 +LI+P+ +V+ E +Q FP+ + +N A F + L+ K L Sbjct: 445 TNLILPIGEWVLDEACKQNKAWQALHPGFPL----RMAVNFAARQFAQADLVETVAKALQ 500 Query: 375 QYWFSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETL 432 + +A ++ LEITE A+ D++ I + L V +AIDDFGTG SS ++L+ Sbjct: 501 KSGLAAEFLE---LEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRF 557 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D+LKIDKSF I ++ + I + L +E++AEGVET+ Q ++LR HG + Sbjct: 558 PIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDM 617 Query: 493 LQGYLYAQPMP 503 +QGYL+++P+P Sbjct: 618 IQGYLFSRPVP 628 >UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BZW1_DELAS Length = 1120 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/250 (37%), Positives = 143/250 (57%), Gaps = 12/250 (4%) Query: 266 RMSFSREINLGLAQHEFELFCQP-LLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R + +E+ GL + +F L+ QP + N R +G E LLRWN+PR+G + P +F+ +AE Sbjct: 825 RTAMEQEMREGLVRSQFVLYYQPQVANGR---IVGAEGLLRWNHPREGLVPPSLFVSLAE 881 Query: 325 EHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW--FS 379 E LI L +V+ E RQ + P + + +NV+P F + ++ + Q Sbjct: 882 ETGLIQQLGEWVLGEACRQLAQWAAEPDMACLMLAVNVSPRQFHQARFVEQVLQALKEHG 941 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 A+P + L LE+TE L DVD A+ L V ++DDFGTG SS ++L+ L D L Sbjct: 942 ANP-RLLKLELTESLLLADVDDTAAKMATLKAHGVGFSLDDFGTGYSSLAYLKRLPLDQL 1000 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + SD ++ + I+ALG L ++++AEGVET+ Q ++L H QGYL Sbjct: 1001 KIDRSFVRDVLSDPNDAAIARTIVALGTSLGLQVIAEGVETEAQRQFLEDQHCHAWQGYL 1060 Query: 498 YAQPMPLRDF 507 + P+P+R F Sbjct: 1061 LSPPVPVRSF 1070 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 95/263 (36%), Positives = 143/263 (54%), Gaps = 13/263 (4%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ L + EF L QP ++ ++ + IG E L+RW +P G + P FI +AEE Sbjct: 680 LEIESQLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEER 739 Query: 327 HLIVPLTRYVMAETIRQ-----RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH 381 IV + +V+ E RQ R P + + +N++ FR+ L L Q SAH Sbjct: 740 GFIVQIGNWVIQEACRQLAQWRRQGLP---RISLAVNLSTLQFRQQDLAVHL-QRALSAH 795 Query: 382 PI--QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L +E+TE + DV+ I + ++L+IDDFGTG SS S+L+ + D L Sbjct: 796 GLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKL 855 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I DA +S + II + + LN+ ++AEGVET EQ K+L R G H QGYL Sbjct: 856 KIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYL 915 Query: 498 YAQPMPLRDFPKWLAGSQPPPAR 520 A+P+P ++F + L P R Sbjct: 916 LAKPVPAKEFERLLEKGVLLPER 938 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/264 (36%), Positives = 145/264 (54%), Gaps = 13/264 (4%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 A R+S + LA+ EF + QP ++ S IG+E LLRWN+ G ISP FIPIA Sbjct: 591 ARRLSIESALRDALARDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISPVEFIPIA 650 Query: 324 EEHHLIVPLTRYVMAETIRQRHVF------PMSSQFHVGINVAPSHFRRGVLIKDLNQYW 377 EE LI+ + +V+ Q + P+ HV +N++P FR+ L + Sbjct: 651 EETGLIMQIGDWVLRTACHQTKAWLDLGLLPL----HVAVNLSPRQFRQADLPAQVAHAL 706 Query: 378 F-SAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 S P L LEITE + D+D +A +L +KL++DDFGTG SS +++ Sbjct: 707 AESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSRFPF 766 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D +KID+SF I ++ VN+ + I +G+ LN+ ++AEGVET+ QA +LR +Q Sbjct: 767 DKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCDAIQ 826 Query: 495 GYLYAQPMPLRDFPKWLAGSQPPP 518 GYL+++P+P +F L +P P Sbjct: 827 GYLFSRPLPPEEFAPLLLSCKPLP 850 >UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J4K1_COMTE Length = 822 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/251 (39%), Positives = 141/251 (56%), Gaps = 17/251 (6%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R R + + +A+ +FE+ QP ++ SQQ +G E L+RW ISP FIP+AEE Sbjct: 567 RHMLERHMRVAVAEGDFEVHYQPKIDLASQQVVGAEALVRWRRQDGSLISPAQFIPLAEE 626 Query: 326 HHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ 384 LIVPL R V+ + ++ R H+ +NV+ V + N + I+ Sbjct: 627 TGLIVPLGRSVLLKACQEGRRWHEQGYLIHIAVNVS------AVQLAKSNFTAMVSEIIE 680 Query: 385 Q-------LILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 Q L LEITE DV + I ELH+ V ++IDDFGTG SS S+L+ D Sbjct: 681 QTGIMPGYLELEITEGVLAKDVKNTFAIINELHKIGVSISIDDFGTGYSSLSYLKQFPID 740 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 VLKID+SFT I ++ ++ + II + L++ LVAEGVETQ QA+ L++ G ++QG Sbjct: 741 VLKIDQSFTREILTEKSSAAIVAAIINMAHGLDLRLVAEGVETQAQAELLQQMGCTVMQG 800 Query: 496 YLYAQP-MPLR 505 YLY++P MP R Sbjct: 801 YLYSRPLMPER 811 >UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVS2_RUBXD Length = 762 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 138/245 (56%), Gaps = 5/245 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A A ++ E+ L + EF + QP+++ + + + VE L+RW P +G + P F+ Sbjct: 495 ARAEKLRLEAELRAALERGEFAVHYQPIVSFATGEVVEVEALVRWERPGRGTVGPAEFLS 554 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQ-YWF 378 +AEE LIVP+ R+V+ E RQ + S + + +N++ S L++++ + Sbjct: 555 VAEESGLIVPIGRWVLREACRQVREWQKGGSRELALAVNLSASQLHHPRLVREVEEALGL 614 Query: 379 SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S + L LEITE+ A+ D R EL V++A+DDFG+G S+ S+L T D Sbjct: 615 SGLEARHLKLEITEQAAVEDAREAARRLEELSALGVRIALDDFGSGYSALSYLRTFPVDT 674 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF IG D +++ +IAL + LN+ + AEG ET+EQ +LR G + QGY Sbjct: 675 LKIDRSFIEGIGRDLQATSIVGAVIALAKSLNMCVTAEGTETEEQLAHLRSLGCDLAQGY 734 Query: 497 LYAQP 501 +++P Sbjct: 735 YFSRP 739 >UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Shewanella RepID=A0KRF8_SHESA Length = 1077 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/259 (35%), Positives = 140/259 (54%), Gaps = 7/259 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 RM + + +AQ EF LF QP+++ ++ Q VE L+RW +P G I PD FI IAEE Sbjct: 806 RMELEQRLRRAVAQDEFTLFYQPIVDMKTGQICSVEALIRWQDPDLGLIPPDQFIAIAEE 865 Query: 326 HHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSHF--RRGVLIKDLNQYWFSAHP 382 LI P+ +V+ + + R M +V INV+ RG+ + Q F+ H Sbjct: 866 TGLIEPMGEWVLNQAMHDLRQWQHMGLNLNVAINVSSRQCINTRGIGFDQVLQECFNRHH 925 Query: 383 I--QQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 I + + +EITE + D + ++ + ++ IDDFGTG SS S+L+ V+K Sbjct: 926 INPRNVHIEITESMLMGDASHCLSTLESIRHLGSQIYIDDFGTGYSSLSYLKKFPISVIK 985 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + N+ + I+ +GQ L +ELVAEG+ET+ Q ++LR G H QGYL Sbjct: 986 IDRSFVEHALENCSNANLVKAIVMMGQSLEMELVAEGIETEAQWQFLRDLGCHYAQGYLL 1045 Query: 499 AQPMPLRDFPKWLAGSQPP 517 ++P+P + L + P Sbjct: 1046 SKPLPFDEITPLLGQTLPK 1064 >UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XP68_PSEMY Length = 1254 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/261 (36%), Positives = 141/261 (54%), Gaps = 10/261 (3%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R+ E+ +A+ + +L QP L G E+LLRW +P +G ISPD FIP Sbjct: 996 AIDQRLQLQGELRQAIARQQLQLVFQPQLVLADDTVAGAEVLLRWLHPERGEISPDQFIP 1055 Query: 322 IAEEHHLIVPLTRYVMAETI----RQRHVFPMSSQFHVGINVAPSHFRR-GVLIKDLNQY 376 +AEE LI + ++V+ ++ R + +P Q + +N++P R+ G + + + Sbjct: 1056 LAEETGLIQDIGQWVLEQSCATLARWQAQWP---QLVLAVNLSPRELRQAGCVARVEDCL 1112 Query: 377 WFSAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 P Q L LEITE L DVD I ++L + V+ AIDDFGTG SS ++L+ L Sbjct: 1113 RRHGVPAQALELEITEGVLLEDVDRCIGNMQQLKAQGVRFAIDDFGTGYSSLTYLKRLPL 1172 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID+SF A + DA + I+ + + L++E VAEG+E Q LR G + Q Sbjct: 1173 DRLKIDRSFVADLDGDASGRMLVQTILMIARNLDLECVAEGIEQPSQLALLREQGCALGQ 1232 Query: 495 GYLYAQPMPLRDFPKWLAGSQ 515 GYL+ +PM +F WL Q Sbjct: 1233 GYLFGKPMVEAEFLAWLQARQ 1253 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/252 (36%), Positives = 142/252 (56%), Gaps = 12/252 (4%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R ++ LA+ +F L QP ++ R GVE L+RW +P++G +SP FIP+AEE Sbjct: 1242 RAELENDLRTALAREQFMLHYQPQIDRRGS-VTGVEALVRWPHPQRGMVSPGEFIPLAEE 1300 Query: 326 HHLIVPLTRYVM----AETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDL-NQYWFSA 380 L++PL R+V+ A+ R +HV P + +NV+ F ++D+ + Sbjct: 1301 TGLVLPLGRWVLHTACAQLARWQHV-PGRGHLSMAVNVSSRQFHHEAFVEDVVRAITATG 1359 Query: 381 HPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P +L LE+TE + D++ IA L V ++DDFGTG SS S+L+ + D LK Sbjct: 1360 APASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLK 1419 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + +D ++ + D IIAL + L ++++AEGVET EQ L + G QGY + Sbjct: 1420 IDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFF 1479 Query: 499 AQPMP---LRDF 507 ++P+P L DF Sbjct: 1480 SRPLPETALEDF 1491 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 142/256 (55%), Gaps = 7/256 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 RM + + ++EFEL QP ++ + + IG+E L+RWN+P G + P+ FI +AEE Sbjct: 598 RMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRVAEE 657 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAHPI 383 +L++PL +V+ E RQ + + +N++ + L ++ + H I Sbjct: 658 CNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLIDNLMMT-HQI 716 Query: 384 Q--QLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L LEITE + D + I R EL K V LAIDDFGTG SS S+L+ L LKI Sbjct: 717 KPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLTRLKI 776 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I +D ++ + IAL + L + LVAEGVET+ Q +YLR G QGY ++ Sbjct: 777 DRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYFS 836 Query: 500 QPMPLRDFPKWLAGSQ 515 +P+P + +++ Q Sbjct: 837 KPLPANNIMAFVSRHQ 852 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/253 (38%), Positives = 137/253 (54%), Gaps = 9/253 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ ++ L Q EFE++ QP ++ +S++ IG E LLRWNN G ++PD FIPIAE+ Sbjct: 877 RLKIEEQLRSALKQKEFEVYFQPFVDIKSRKIIGAEALLRWNNALLGQVTPDEFIPIAEQ 936 Query: 326 HHLIVPLTRYVM--AETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPI 383 LIV + +YV+ A ++ + F + INV+P FR + LN H I Sbjct: 937 TGLIVSIGQYVIEVAFATAKKWQQTYNPYFKIAINVSPKQFRENTFVDMLN-IQLDKHQI 995 Query: 384 Q--QLILEITERDALLDVDYRIARELHRKN---VKLAIDDFGTGNSSFSWLETLRPDVLK 438 + LEITE LL D I L N V +++DDFGTG SS S+L + + LK Sbjct: 996 HASTIELEITE-GVLLSSDAVIDSNLISINDIGVSISMDDFGTGYSSLSYLRSYPFNTLK 1054 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 +DKSF I D + + IA+G LN+ +VAEGVET+EQ L QGYL+ Sbjct: 1055 VDKSFINDITVDPGDLELVGAAIAMGHGLNLTVVAEGVETEEQYHLLNALKCDYGQGYLF 1114 Query: 499 AQPMPLRDFPKWL 511 ++P+P F L Sbjct: 1115 SKPLPQAAFEALL 1127 >UniRef50_A5KWC7 PAS:GGDEF n=3 Tax=Gammaproteobacteria RepID=A5KWC7_9GAMM Length = 822 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 139/260 (53%), Gaps = 13/260 (5%) Query: 272 EINLGL----AQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 E N+GL A E E+F QP ++ SQ+ IG E L+RW +P+ G + P F+ +AE+ Sbjct: 563 ETNMGLHQAIANDELEVFFQPKVDLDSQEIIGAEALVRWRHPKLGLLPPVDFLEVAEKSD 622 Query: 328 LIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW------FSAH 381 LI+ + ++V + + S G+ + + R + DL + Sbjct: 623 LIIDIDKWVFKKVANLITEWQRSGINLEGVTFSINFSARMFYMTDLAEQLQVILDETDCK 682 Query: 382 PIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P QL+LEITERD + D + R LH K K+AIDDFGTG SS S L+ L D +K+ Sbjct: 683 P-HQLLLEITERDMMRDFETCSRTIEVLHSKGYKIAIDDFGTGYSSLSVLKNLSADCVKL 741 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I S V+ +T ++ L Q L+ ++AEG+ETQ K LR+ G QGY +A Sbjct: 742 DRSFIEDINSSNVDYEITCAVLKLAQILDFSVIAEGLETQNHVKTLRQIGCKYAQGYFFA 801 Query: 500 QPMPLRDFPKWLAGSQPPPA 519 +P+P+ D+ + G+ + Sbjct: 802 RPLPIDDWVSYFVGNAEQAS 821 >UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8I8_9ALTE Length = 1020 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/240 (35%), Positives = 141/240 (58%), Gaps = 9/240 (3%) Query: 269 FSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHL 328 E+ LA+ + L+ QP + Q +G E+LLRW +P++G +SP VFIPIAE+ L Sbjct: 780 MEEELRNALAEEQLVLYYQPQIR-NPNQLLGYEVLLRWRHPKRGIVSPAVFIPIAEQSRL 838 Query: 329 IVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQ 384 I+P+ R+++ + + + P +S+ + +NV+ F+ ++ + Q + P + Sbjct: 839 ILPIGRWIIEQACEKLAAWQSEPTTSELSLAVNVSIIQFQSNNFVEQVGQILEKTGAPPR 898 Query: 385 QLILEITERDALLDVDYRIARELHR---KNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE L++ RI ++R V+ ++DDFGTG SS S+L L D +KID+ Sbjct: 899 LLKLEVTE-SLLMNDPERITEMMNRLRSMGVRFSLDDFGTGYSSMSYLNQLPLDQIKIDQ 957 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + ++ +S + + II L + LN+E++AEGVET+EQ +L HG QGYL+ +P Sbjct: 958 SFINEVANNLASSAIVESIIGLAKGLNLEVIAEGVETEEQRNWLANHGCQNFQGYLFGRP 1017 >UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HUB1_LYSSC Length = 581 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/249 (36%), Positives = 137/249 (55%), Gaps = 14/249 (5%) Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 E+ + EFEL QP + ++Q G+E L+RWNN R G++SP FIP AEE LI+P Sbjct: 327 ELRRAIDNREFELHFQPKICMDNEQIQGLEALVRWNNERLGFVSPGEFIPYAEETGLIIP 386 Query: 332 LTRYVM---AETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKD----LNQYWFSAHPIQ 384 L+ ++ E + Q + + V IN++ HF++ + L +Y P Sbjct: 387 LSEVILEKACEAVIQMQKYGW--KIPVAINISSIHFKQHNFLDSIQTILERY---NMPAN 441 Query: 385 QLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 +E+TER + + +++ L + K++IDDFGTG SS S+L D LKID+S Sbjct: 442 NFEIEVTERTVMNSANETVSKLVRLKQLGFKISIDDFGTGYSSLSYLVRFPLDCLKIDRS 501 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F IGS V D II + RL +++VAEGVE +Q LR+ I+QGY Y++P+ Sbjct: 502 FIQHIGSLDEKQAVVDAIIQMSHRLKMKVVAEGVEQAQQVDILRKMNCDIIQGYYYSKPL 561 Query: 503 PLRDFPKWL 511 PL D +++ Sbjct: 562 PLNDLMEFM 570 >UniRef50_A0Z1K1 Hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z1K1_9GAMM Length = 628 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/226 (38%), Positives = 135/226 (59%), Gaps = 9/226 (3%) Query: 287 QPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ--- 343 QP ++ S + GVE L+RW++P G ISP +F P+AE LI L ++ Sbjct: 388 QPQIDTSSGRISGVEALVRWSHPELGAISPALFAPLAEGSGLISQLGDWIFKRVDSDIQS 447 Query: 344 -RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYR 402 V P S + IN++P F + ++ L ++ LE+TE + D D Sbjct: 448 LNDVLP--SYLTISINLSPLQFTQANFLETLKLRLSELQSNNEIELELTEGVIMSDADDS 505 Query: 403 IAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDII 460 + + EL + +LAIDDFGTG SS S+L+ + LKID++F A +G+++ NS V I Sbjct: 506 LLKLHELRKAGFRLAIDDFGTGYSSLSYLKDFPVNTLKIDQAFVANLGNESGNSIVR-AI 564 Query: 461 IALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRD 506 +AL + LN+++VAEGVETQEQA++L+RH +ILQG+L A+P+PL++ Sbjct: 565 LALAEALNLDVVAEGVETQEQAQFLKRHHCNILQGFLLAKPIPLKE 610 >UniRef50_Q483V3 Sensory box/GGDEF/EAL domain protein n=5 Tax=Alteromonadales RepID=Q483V3_COLP3 Length = 692 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/253 (35%), Positives = 140/253 (55%), Gaps = 21/253 (8%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R +++ L ++EFEL+ QP + + Q+ GVE LLRW+N G ++PD FIPIAE Sbjct: 438 RFEVEEQMHGALERNEFELYYQPQFDVKKQKITGVEALLRWHNSVLGNVTPDEFIPIAEH 497 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSAHPI 383 LI+P+ R+V+ + + + + Q F + +N++P FR L+ + + I Sbjct: 498 TGLIIPIGRFVIKQALGFLNKWQNIHQQKFTMAVNLSPCQFRDSTLLGFIKDSLSETNVI 557 Query: 384 -QQLILEITE----------RDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETL 432 + L LEITE DAL+ E+ +KL++DDFGTG SS S+L Sbjct: 558 AEHLELEITEGVLMSGQSHIHDALV--------EISELGIKLSMDDFGTGYSSLSYLRQY 609 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 DVLKID+SF I + + + + IIA+ L + +VAEGVET+EQ L G + Sbjct: 610 AFDVLKIDQSFIRGIPLNKADCELVNTIIAMAHSLGLTVVAEGVETKEQLTLLEELGCDL 669 Query: 493 LQGYLYAQPMPLR 505 +QGY +++P+P + Sbjct: 670 VQGYYFSKPIPAK 682 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/242 (37%), Positives = 139/242 (57%), Gaps = 5/242 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ ++ + + EF L QP L+ R+ + +GVE L+RW +P G I P FI +AEE Sbjct: 691 RLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEE 750 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAH-P 382 LIVP+ +V+ E RQ V+ + +N++ F + L++ + P Sbjct: 751 TGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEETQLP 810 Query: 383 IQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 Q L +E+TE + DVD+ I REL V+L+IDDFGTG SS S+L+ DVLKID Sbjct: 811 PQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKID 870 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF I +D ++ + II+L L + ++AEGVET+EQ YL++H +QGY +++ Sbjct: 871 RSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSR 930 Query: 501 PM 502 P+ Sbjct: 931 PI 932 >UniRef50_A5VXC5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=22 Tax=Pseudomonas RepID=A5VXC5_PSEP1 Length = 926 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 143/261 (54%), Gaps = 19/261 (7%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 +Y++ + L Q+E ++F QP L RS + +G+E LLRWN+P +G I PD FI + Sbjct: 664 ASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISV 723 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--------HVGINVAPSHFRRGVLIKD-- 372 AEE LI+P+ ++V+ R MS Q HV IN++P F L+ Sbjct: 724 AEETGLIIPIGKWVV------RQACCMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASIS 777 Query: 373 --LNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLE 430 L + H ++ + E +A D +R EL + LA+DDFGTG SS S+L+ Sbjct: 778 TILKEEALPPHLLELELTEGLLLEASEDT-HRQLDELKALGLTLAMDDFGTGYSSLSYLK 836 Query: 431 TLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGV 490 D+LKID+SF I + + +T ++A+ L +++VAEG+ET EQ +LRRH Sbjct: 837 KFPIDILKIDRSFINEIPDNQDDMEITSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRC 896 Query: 491 HILQGYLYAQPMPLRDFPKWL 511 + QGYL+ +P+P R+ + L Sbjct: 897 DVGQGYLFDRPIPGRELAERL 917 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 138/244 (56%), Gaps = 7/244 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ F ++ + + +FEL QP +N+ S + + VE L+RW +PR+G +SP FIPIAEE Sbjct: 956 RLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEE 1015 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPI 383 LI+PL +V+ E RQ ++ + + V +N++ LI + + H + Sbjct: 1016 TGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVART-LGNHGL 1074 Query: 384 Q--QLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L LEITE A+ D IA+ L + L+IDDFGTG SS S+L+ L D LK+ Sbjct: 1075 EGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKL 1134 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I + + + IAL L +E+VAEG+ET+ Q + L H +QGYL++ Sbjct: 1135 DQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFS 1194 Query: 500 QPMP 503 P+P Sbjct: 1195 APLP 1198 >UniRef50_A4TYP2 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYP2_9PROT Length = 953 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/235 (38%), Positives = 131/235 (55%), Gaps = 5/235 (2%) Query: 278 AQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVM 337 + +F++F QPL+NA+S + IG E L+RW NP +G + PD FIP+AE + LIVP+ R ++ Sbjct: 712 SDDQFKVFYQPLVNAQSGRIIGAEALVRWFNPTRGLVPPDRFIPLAESNGLIVPMGRKIL 771 Query: 338 AETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH-PIQQLILEITERD 394 A F + S F + +NVA + ++ +++ A P L +EITER Sbjct: 772 ATACADGARFRKHIGSDFFMAVNVAAAQCADPGFLETVSKCLSDAKLPPHCLEVEITERT 831 Query: 395 ALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAV 452 + + A L KL+IDDFGTG S+ S+L LKID+SF IG Sbjct: 832 VVGNNPTITAFMTALREAESKLSIDDFGTGYSALSYLRQYPFTTLKIDRSFVMGIGDVEQ 891 Query: 453 NSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 + + II + L +E++AEGVET EQ ++LR G LQGYL +PMP +F Sbjct: 892 DDALVLAIIHMAHALGLEVIAEGVETTEQQEFLRDAGCETLQGYLLGKPMPADEF 946 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 87/247 (35%), Positives = 140/247 (56%), Gaps = 5/247 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + + +F L QP ++ S Q IG E L+RWN+ G +SP FIP+AEE Sbjct: 447 RLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLAEE 506 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWF-SAHP 382 LI+PL +V+ RQ + + + +N++P RG +++ + + + Sbjct: 507 TGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETGLE 566 Query: 383 IQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 Q L LEITE DV+ A +L VK+++DDFGTG SS S+L+ D LKID Sbjct: 567 AQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKID 626 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF I +D ++ + II+LG+ LN+ ++AEG+ET++Q ++L +G QGYL ++ Sbjct: 627 QSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSK 686 Query: 501 PMPLRDF 507 P+P ++F Sbjct: 687 PVPNKNF 693 >UniRef50_Q55033 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55033_SYNY3 Length = 421 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 96/268 (35%), Positives = 145/268 (54%), Gaps = 16/268 (5%) Query: 271 REINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIV 330 R++ +GL + LF QP ++ + G E L+RW++PR+G++SP +FIPIAE+ I Sbjct: 163 RDLEVGLNTGQVFLFYQPKVSIHNHCLAGCEALIRWHHPRKGFVSPGLFIPIAEKTGFIS 222 Query: 331 PLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRG--VLIKDLNQYWFSAHPIQQL 386 + +V+ +RQ + V IN++ F + I L + + P QQL Sbjct: 223 VVGEWVIETVLRQCQQWQYQGLDPIQVAINISARQFHGEDLICILRLGTHKYDVSP-QQL 281 Query: 387 ILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFT 444 +E+TE + +V I + EL + +AIDDFGTG SS S+L+ DVLKID+SF Sbjct: 282 EVELTETLLVKNVQDSIKQLNELRAEGFSVAIDDFGTGYSSLSYLQQFPFDVLKIDQSFV 341 Query: 445 AAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPL 504 I +A N T+T II L L + + AEGVET + + G LQGYL+++P+P+ Sbjct: 342 RHIDKNAKNKTITASIINLAHELELRVTAEGVETWAEYDTIAHMGCDELQGYLFSRPLPV 401 Query: 505 RDFPKWLAGSQPPPARHNGHITPIMPLR 532 DF + L+ G PI+PLR Sbjct: 402 ADFTELLS---------RGTDVPILPLR 420 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/251 (36%), Positives = 135/251 (53%), Gaps = 6/251 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A+A R++ E+ + + E LF QP+++ E L+RW +P QG ++PD FIP Sbjct: 320 ASAERLTLEAELRHAVERGELRLFYQPIVDP-DGTVRAAEALVRWQHPEQGLLAPDRFIP 378 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-F 378 +A+E LI + +V+ E Q + + +F V +NV+ F + L++ + + Sbjct: 379 LADETGLITEIGAWVLTEACYQGRCWHDAGHERFRVSVNVSAVQFGQPRLLETVREALRG 438 Query: 379 SAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S P L LEITE + DV+ R L V++A+DDFGTG SS S+L L D Sbjct: 439 SGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSSLSYLRRLPIDT 498 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 +KIDKSF + ++ ++ + IIAL L + VAEGVET EQ LRR G QGY Sbjct: 499 VKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATLRREGCDSFQGY 558 Query: 497 LYAQPMPLRDF 507 Y +P+P F Sbjct: 559 RYGRPVPAEVF 569 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 89/237 (37%), Positives = 136/237 (57%), Gaps = 11/237 (4%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L++ + EL+ QP L+ +S +G E LLRWN+P +G +SP FIP+AEE LIV + + Sbjct: 835 ALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPLAEETGLIVSMGEW 894 Query: 336 VMAETIRQRHVF--PMSSQFHVGINVAPSHFRRGVLI----KDLNQYWFSAHPIQQLILE 389 ++ RQ + Q V +N++ F L+ K L Q + P + L LE Sbjct: 895 ILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQ---TGVPTEWLELE 951 Query: 390 ITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 ITE + D+ I L + V+LAIDDFGTG SS S+L+ LKIDKSF + Sbjct: 952 ITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLKIDKSFVDDL 1011 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPL 504 +DA ++ + + +AL ++++ +VAEG+E QEQ YL++ G QGYL ++P+P+ Sbjct: 1012 LTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLISRPLPV 1068 >UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=45 Tax=Rhizobiales RepID=C6AVD3_RHILS Length = 717 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/249 (36%), Positives = 138/249 (55%), Gaps = 11/249 (4%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 LA R + E+ L + +FEL QP++ + G E L+RW +P +G ++P FI Sbjct: 454 LAAQRRHVMTAELWEALEKRQFELHYQPIVQLDNDGIGGFEALIRWRHPERGLVAPMEFI 513 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVL----IKDLNQY 376 P+AEE LIVP+ +V+ E R +P+ + +N++ S FR L + L++ Sbjct: 514 PLAEETGLIVPIGDWVIREACRAAGGWPV--HLRIAVNLSVSQFRHASLLSTVVAALDET 571 Query: 377 WFSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 +A +L +EITE L D D + R L V++AIDDFGTG SS S+L + Sbjct: 572 GLTA---DRLEIEITESVFLTDADQSLPRLRALKALGVRIAIDDFGTGYSSLSYLRSFPF 628 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D +K+D+SF + I +DA N + ++ +G N +AEG+ET+EQ + LR G +Q Sbjct: 629 DKIKLDRSFVSGIETDAGNLAIVRAVVGIGSGFNATTLAEGIETEEQLQKLRAEGFSEVQ 688 Query: 495 GYLYAQPMP 503 GYL +PMP Sbjct: 689 GYLLGRPMP 697 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 149/258 (57%), Gaps = 6/258 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T R + L + EF ++ QP + + + +GVE L+RW +P++G ISP FIP+ Sbjct: 685 TLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPM 744 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDL-NQYWFS 379 AEE LI+P+ +++ Q + S V +N++ F + L + + N + Sbjct: 745 AEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDT 804 Query: 380 AHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L LEITE A+ DV + + EL + + LAIDDFGTG SS ++L+ L D+L Sbjct: 805 GLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDIL 864 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +++ + + II LG L +++VAEGVET+EQ +LR+ ++QGYL Sbjct: 865 KIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYL 924 Query: 498 YAQPMPLRDFP-KWLAGS 514 + +P+P+R+ K+L+ + Sbjct: 925 FTKPLPVRELEQKYLSNN 942 >UniRef50_A5G085 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G085_ACICJ Length = 705 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 141/260 (54%), Gaps = 6/260 (2%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 A R + + + +F L QP+++AR+ C E LLRWN+P +G +SP FIP+A Sbjct: 435 ADRYDLEQGLRDAIKGDQFRLVFQPIIDARTGACTAFEALLRWNHPVRGAVSPATFIPVA 494 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHP 382 E+ I + R+V+ E R +P S V +N++ SH G L+ D+ S P Sbjct: 495 EQSGQIERIGRWVLEEACRAATGWPDPS-IAVTVNISVSHVLVGSLLDDVEHALAVSGLP 553 Query: 383 IQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 +L +EITE L D D + L + V + +DDFGTG SS S+L L DV+KID Sbjct: 554 PSRLKIEITETMFLHDADRSAPLFDRLRQMGVGILLDDFGTGFSSLSFLGNLPIDVIKID 613 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF G + + + I+++ + L +++ AEGVET EQ + L GV +QGYL+++ Sbjct: 614 QSFVRDAGRNGYAT--IEAILSIARALGLQVTAEGVETPEQNRNLVERGVGSVQGYLFSR 671 Query: 501 PMPLRDFPKWLAGSQPPPAR 520 P+P D WL + P R Sbjct: 672 PIPAADVTDWLQMTGRVPDR 691 >UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A3Q8W6_SHELP Length = 1094 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 145/257 (56%), Gaps = 15/257 (5%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ + + + QHEF L QP+++ S + + +E LLRW +P++G + PD FIPIAEE Sbjct: 830 RITLEQSLRSAVLQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEE 889 Query: 326 HHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVA--------PSHFRRGVLIKDLNQY 376 LI P+ +V+ + +R R ++ INV+ PSHF ++ L Q Sbjct: 890 TGLIEPIGEWVIQQALRDLRQCHSQGIMINMAINVSGRQLAHGDPSHF--ACMLNGLLQK 947 Query: 377 WFSAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 + A P Q + +EITE + D + + + V++ +DDFGTG SS S+L+ Sbjct: 948 YDVA-P-QYVHIEITESILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPI 1005 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 V+KIDKSF + D ++ + II +GQ L++ LVAEGVE++ Q +L+ G +Q Sbjct: 1006 SVIKIDKSFVDNMLEDRADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDFVQ 1065 Query: 495 GYLYAQPMPLRDFPKWL 511 GYL A+PMPL++ L Sbjct: 1066 GYLVAKPMPLKELEPLL 1082 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 89/248 (35%), Positives = 144/248 (58%), Gaps = 8/248 (3%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 M ++ + EF ++ QP ++ +++ IG E L+RW +P+ G + P FIP+AE Sbjct: 955 MQLQGQLRHAIINQEFRIYYQPQIDTLNERMIGAEALVRWQHPQHGLVPPLKFIPLAERS 1014 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQFH---VGINVAPSHFRRGVLIKDLNQYW-FSAHP 382 LI+PL +V+ E RQ V+ ++ + +N++ F+RG +++ + Q S P Sbjct: 1015 GLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRGNIVETVIQALERSGLP 1074 Query: 383 IQQLILEITERDALLDVDYRIARELHRKN---VKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L LE+TE L DV+ + LHR +KL+IDDFGTG SS S+L+ L D LKI Sbjct: 1075 AENLELELTESILLDDVEV-VMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVDKLKI 1133 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + D ++ + II LG L + ++AEGVET+ Q + L+ + +QGYL++ Sbjct: 1134 DQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQGYLFS 1193 Query: 500 QPMPLRDF 507 +P+P DF Sbjct: 1194 RPIPAEDF 1201 >UniRef50_Q5E8Q7 GGDEF domain protein n=2 Tax=Vibrio fischeri RepID=Q5E8Q7_VIBF1 Length = 852 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 151/256 (58%), Gaps = 11/256 (4%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A+ ++ + + E++L + E F QP+++ +S + IG E L+RW +P++G +SP FIP Sbjct: 597 ASLHKANMTAELSLAIKNKELVPFYQPIIDIKSGKTIGAEALIRWLSPQRGMVSPLDFIP 656 Query: 322 IAEEHHLIVPLTRYVMA----ETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQ-- 375 +AEE+ +I+P+ V+ +T+ + + FH+ +N++ + + +L Sbjct: 657 LAEENGMIIPMGSQVLTQACLDTVERIDQGLWPADFHMHVNLSVCQLTQNNFLDELKAVL 716 Query: 376 YWFSAHPIQQLILEITERDALLDVDYRIARELHR---KNVKLAIDDFGTGNSSFSWLETL 432 + S P + L LEITE L++ D + + V++AIDDFGTG SS +++ L Sbjct: 717 HNTSMAP-ENLTLEITES-RLVNHDNSTINTMQKIRDLGVQIAIDDFGTGYSSLAYIHKL 774 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 DVLK+D+SF + ++ ++S++ + + Q +I LVAEG+ETQEQAK L H Sbjct: 775 PFDVLKVDRSFIKDLTAENIDSSIAAAVCNMTQGFDITLVAEGIETQEQAKLLASLNYHH 834 Query: 493 LQGYLYAQPMPLRDFP 508 QG+LY++P+PL D+P Sbjct: 835 AQGFLYSRPIPLEDWP 850 >UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Rhodopseudomonas palustris RepID=Q2J3Q8_RHOP2 Length = 743 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 93/241 (38%), Positives = 132/241 (54%), Gaps = 5/241 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R E+ + EF+L+ QP + ARS + IG E LLRW +PR+G++ P FIP+AEE Sbjct: 486 RQQLEGELRQAILNREFDLYYQPQVEARSGRVIGAEALLRWRHPRRGFVPPSEFIPVAEE 545 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQ 384 LI L +V+ E + +P + + IN++P RG L + Q S P + Sbjct: 546 TGLIEKLGEWVLKEAAAEAIRWP--APIKLAINLSPVQLSRGNLTDTVTQALRLSGLPPE 603 Query: 385 QLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 +L +EITE L D +A R+L V +A+DDFGTG SS S+L D +KIDK Sbjct: 604 RLEVEITENVFLEDEVNNLAVIRQLRSLGVSVALDDFGTGYSSLSYLTRFPFDQIKIDKF 663 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F+ + + +T+ +I L + L I VAEGVET Q + LR GV QGYL+ P+ Sbjct: 664 FSMNLIERSDCATIVSSVITLARGLGISTVAEGVETVRQFELLREAGVDYFQGYLFGHPV 723 Query: 503 P 503 P Sbjct: 724 P 724 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 142/250 (56%), Gaps = 13/250 (5%) Query: 272 EINL--GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLI 329 EINL L + E +L QP ++ + G+E LLRW +P +G ISP FIP+AEE LI Sbjct: 805 EINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLI 864 Query: 330 VPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKD----LNQYWFSAHPI 383 PL +V+ + RQ ++ + S V +N++ F + L K+ L + S H + Sbjct: 865 YPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLL 924 Query: 384 QQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + LEITE L +++ I EL + V+ +IDDFGTG SS S+L+ L D +KI + Sbjct: 925 E---LEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQ 981 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 F I +D + + IA+ + L ++L+AEGVE +Q +L HG H +QGY +A+P Sbjct: 982 EFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKP 1041 Query: 502 MPLRDFPKWL 511 MP ++ P ++ Sbjct: 1042 MPAQEVPSFI 1051 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 97/260 (37%), Positives = 140/260 (53%), Gaps = 7/260 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A A R+ ++ L + EFEL+ QP+L+ G E LLRW++P G I PD FIP Sbjct: 592 AAAERLHLENDLREALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRFIP 651 Query: 322 IAEEHHLIVPLTRYVMAETIRQ--RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS 379 +AEE LI P+ +V+ E Q R + V +NV+ F R L + + Q + Sbjct: 652 LAEETGLIRPIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEA 711 Query: 380 -AHPIQQLILEITER---DALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A L+LEITE + + R+ REL V L++DDFGTG SS S+L+ D Sbjct: 712 QALAPDALVLEITESVLMHGSANTETRL-RELKAMGVGLSLDDFGTGYSSLSYLKRFPID 770 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKIDKSF + D + T+ +IA+G L +++VAEGVE+ E LRR +QG Sbjct: 771 TLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQG 830 Query: 496 YLYAQPMPLRDFPKWLAGSQ 515 Y +++P+P R +W+ Q Sbjct: 831 YHFSRPLPARALSRWIQQHQ 850 >UniRef50_A1TXU5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1TXU5_MARAV Length = 577 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 144/259 (55%), Gaps = 11/259 (4%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 ++ Y++ ++ L E EL+ QP ++ +++ GVE LLRWN+P +G + PD FI Sbjct: 311 ISAGYQLRLEADLRNALRGKELELYYQPRIDLATEEVRGVECLLRWNHPERGLVGPDEFI 370 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHV-----FPMSSQFHVGINVAPSHFRRGVLIKDLNQ 375 P+AE LIVP+ +V+ + ++ FP +N++ F + + + + Sbjct: 371 PVAERSGLIVPIGYWVIEQACKRLQESTELGFP---GLVFAVNLSFRQFHDRKMTETIFR 427 Query: 376 YWFSAHPIQQLI-LEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETL 432 F+A+ L+ LE+TE + D +Y R REL++ + A+DDFGTG SS S L+ L Sbjct: 428 IIFNANVDTSLLELELTESAMMHDPEYAQRCLRELNQLGISFALDDFGTGFSSLSNLQHL 487 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 ++KIDKSF +G A + II+L L I +VAEGVET Q ++LR+ Sbjct: 488 PISLVKIDKSFVQELGQSADAEHIIRAIISLAHSLQISVVAEGVETDGQLEFLRQQHCDE 547 Query: 493 LQGYLYAQPMPLRDFPKWL 511 +QGY YA+PMP D +++ Sbjct: 548 IQGYYYARPMPWNDLVQFM 566 >UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 Length = 1578 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 145/258 (56%), Gaps = 5/258 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 L R + ++ L Q +F+++ QP +++ IG E LLRWN+P +G+I P++FI Sbjct: 1322 LEVESRFALEADLRSALEQKQFQVYLQPQVDSHGV-WIGAEALLRWNHPGRGFIPPNIFI 1380 Query: 321 PIAEEHHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSHFRRGVLIKDL-NQYWF 378 PIAEE LI + +V+ + + + + + INV+P FR+ K++ N Sbjct: 1381 PIAEEIGLIGGIGDFVLEQVCQYLARLQQLGLTLRIAINVSPRQFRQANFAKEIKNLLAC 1440 Query: 379 SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + +L LE+TE + D IA EL + ++DDFGTG SS S+L+ L + Sbjct: 1441 TGVDPYRLTLEVTEGLIVEDTHQAIATMFELQTLGIHFSVDDFGTGYSSLSYLKRLPLNE 1500 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID++F D N+ + + II++ + N+ +VAEGVET+EQ ++L + G + QGY Sbjct: 1501 LKIDRAFVQDAPQDLNNAALVEAIISVARTFNLAIVAEGVETEEQVQFLAQLGCNFYQGY 1560 Query: 497 LYAQPMPLRDFPKWLAGS 514 Y +PMP+ +F + L S Sbjct: 1561 FYGRPMPIDEFHQKLTAS 1578 >UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Burkholderiaceae RepID=B2JUP6_BURP8 Length = 980 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 144/256 (56%), Gaps = 12/256 (4%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 +A R+ + ++ L +F L+ QP+++ + E L+RW +P +G +SP FI Sbjct: 713 VAAEKRLRLTSDLRTALPHDQFRLYYQPIVDLSTGDIFKAEALIRWLHPERGMVSPLDFI 772 Query: 321 PIAEEHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQY 376 P+AE+ LIVP+ +V + ++Q R F S F + +N++P R+ + L Sbjct: 773 PLAEDTGLIVPIGEWVFRQAVQQAKLWRQRFHPS--FQISVNMSPVQIRQDNQLGALWSD 830 Query: 377 WFS--AHPIQQLILEITER---DALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLET 431 + + P Q + +EITE A L++D R+A H ++++IDDFGTG SS ++L+ Sbjct: 831 YLTREGMPGQSIAIEITEGLLLHADLNIDARLATFRH-AGIRISIDDFGTGYSSLAYLKR 889 Query: 432 LRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVH 491 D LKID+SF +G DA N + + ++ L +L ++++AEGVET EQ +L G Sbjct: 890 FDIDFLKIDRSFVQNLGFDADNQALCEAMVVLAHKLGLKVIAEGVETVEQRDFLTAVGCD 949 Query: 492 ILQGYLYAQPMPLRDF 507 QG+LY+QP+P F Sbjct: 950 FAQGFLYSQPVPPDQF 965 >UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MI55_ALKOO Length = 737 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 85/241 (35%), Positives = 135/241 (56%), Gaps = 15/241 (6%) Query: 281 EFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAET 340 E LF QP++N + +GVE LLRW P G I P+ FIP+AEE LI+ + ++V Sbjct: 497 ELTLFYQPIMNTSTGNIVGVEALLRWYQPGHGMIGPNTFIPLAEETDLIISIGKWVFRNV 556 Query: 341 IRQRHVFPMSSQFHVG-------INVAPSHFRRGVLIKDLNQYWFSAH-PIQQLILEITE 392 Q + H G INV+ F+ ++ + Q A P + + +EITE Sbjct: 557 CAQ-----IKDWIHRGYDVKRVYINVSAKQFQEKGFLESILQALKEAELPPKYIGIEITE 611 Query: 393 RDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD 450 + D+D+ I ++L + ++IDDFGTG S+F++L+ + D +KID+SF A + Sbjct: 612 TVIIQDIDHTIELIKKLKDIGISISIDDFGTGYSNFNYLKEMGVDEIKIDRSFIAETTKN 671 Query: 451 AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 + +T II L +L+I + AEGVET+EQ ++LR +QG+ Y++P+P +F K+ Sbjct: 672 SKKRAITKTIILLAHQLDIAVTAEGVETKEQLEFLRESSCSKIQGFYYSRPVPPEEFEKF 731 Query: 511 L 511 L Sbjct: 732 L 732 >UniRef50_A3WP65 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Idiomarina baltica OS145 RepID=A3WP65_9GAMM Length = 821 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 156/274 (56%), Gaps = 32/274 (11%) Query: 265 YRMSFSREINL----------GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 YR + EI L E +L+ Q ++A + + + E L+RW++P QG I Sbjct: 550 YRQQYGEEIKRQFDVERMLRHALKNDELDLYLQSQVDA-TGKVVSAEGLVRWHHPEQGLI 608 Query: 315 SPDVFIPIAEEHHLIVPLTRYVM---AETIRQRHVF--PMSSQFHVGINVAPSHFRRGVL 369 SP VFIPIAE LI+ + R+V+ A+ + + + P+ + + +N++ HF RG L Sbjct: 609 SPGVFIPIAERSDLILSIDRWVLQRAAQILASKEIAENPIDA---LSVNISARHFVRGDL 665 Query: 370 I----KDLNQYWFSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGN 423 + K L Y F QQL++E+TE + D D + REL + ++ +IDDFGTG Sbjct: 666 VHVVSKLLENYHFKP---QQLMIEVTEGVLIEDTDKVIEVMRELSKLGIRFSIDDFGTGY 722 Query: 424 SSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAK 483 SS ++++ L LKID+SF ++G + + + I+++G+ L++ ++AEGVET+ +A+ Sbjct: 723 SSLAYIQKLPVSELKIDQSFVRSMGEKTTHDALVETILSIGEHLDLRMIAEGVETEHEAR 782 Query: 484 YL-RRHGVHILQGYLYAQPMPLRDFPKWLAGSQP 516 +L R ++QGYL+A P+P ++ WLA P Sbjct: 783 FLTERCPTIVMQGYLFAYPVPAQE---WLASFSP 813 >UniRef50_Q73DV7 Sensory box/GGDEF family protein n=76 Tax=Bacillus cereus group RepID=Q73DV7_BACC1 Length = 702 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 89/255 (34%), Positives = 142/255 (55%), Gaps = 24/255 (9%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R +++ + ++EF L+ QP +N +++ +E L+RW N G++SP+ FIP+AE Sbjct: 451 RFIIENQLHRAIEKNEFFLYYQPQINIETKKIASMEALIRWENKELGFVSPNQFIPLAER 510 Query: 326 HHLIVPLTRYVMAETIRQ--------RHVFPMSSQFHVGINVAPSHFRRGVLI----KDL 373 I+ L +V+ E RQ V P + +N++ HFR LI + L Sbjct: 511 TGFIIKLDEWVVNEVCRQIREWLNKGYEVVP------IAVNISARHFRSITLIEMITRAL 564 Query: 374 NQYWFSAHPIQQLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLET 431 ++Y AH L +E+TE AL+ D+ R+ +L +N+K+ +DDFGTG SS S+L+T Sbjct: 565 HKYNVPAHL---LAIEVTE-GALIHKDISKRVLLQLKEQNLKIHLDDFGTGYSSLSYLKT 620 Query: 432 LRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVH 491 D LKID+SF I D ++ +T II L L + ++AEGVE EQ ++L+ V Sbjct: 621 YPIDTLKIDRSFMEGIHVDERDTNITAAIIHLAHTLELNVIAEGVEKAEQIQFLKEKNVK 680 Query: 492 ILQGYLYAQPMPLRD 506 +QGY Y++P+ D Sbjct: 681 FVQGYYYSRPLSKYD 695 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 84/236 (35%), Positives = 140/236 (59%), Gaps = 5/236 (2%) Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 E+ + Q +F L QP +N + + IGVE L+RW +P+ G ISP FIPIAE+ LIVP Sbjct: 328 ELRKAIEQKQFTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSGLIVP 387 Query: 332 LTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLI-LE 389 + +V+ E +Q ++ +S V +N++P F L + F+ L+ +E Sbjct: 388 IGNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAHTNLASVIKNTLFNTGLDPHLLEIE 447 Query: 390 ITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 ITE D+ +A E+ + ++++IDDFGTG SS +L+ + LKID+SF + + Sbjct: 448 ITE-SMTADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSFVSEL 506 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 ++ T+ II++ + LN+ +VAEG+ET+EQ +L++H H QG+L+++P+P Sbjct: 507 HNNPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLP 562 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 147/261 (56%), Gaps = 15/261 (5%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+S ++ L Q E L QP ++ RS + +GVE LLRW +P++GWI+P FIP+AEE Sbjct: 590 RLSLEADLRRALQQGELALHYQPQVDLRSGRIVGVEALLRWRHPQRGWIAPGAFIPLAEE 649 Query: 326 HHLIVPLTRYVMAETIRQ-RH-----VFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS 379 LI+ L +V+ Q RH V P + +N++ G L+ D + + Sbjct: 650 CGLIIELGDWVLRAACEQIRHWSDAGVAPRQT----AVNISAVQISSGGLL-DTVRRTLA 704 Query: 380 AHPI--QQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A I +L LEITE + + + +++ +L V+L+IDDFGTG SS ++L+ L Sbjct: 705 ATGIAPDRLELEITESFVMFERERSFKLLADLRALGVQLSIDDFGTGYSSLAYLQQLEVH 764 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID SF + + N+++ +IA+G L +E++AEGVE EQA +L ++QG Sbjct: 765 KLKIDISFVRNMTRNRGNASIVKAVIAMGHSLGLEVIAEGVEEIEQAAHLLALQCDVMQG 824 Query: 496 YLYAQPMPLRDFPKWLAGSQP 516 YL ++P+P+ D + L +P Sbjct: 825 YLVSKPLPVDDITRLLESFEP 845 >UniRef50_D0SWS6 Predicted protein n=2 Tax=Acinetobacter RepID=D0SWS6_ACILW Length = 958 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 88/249 (35%), Positives = 145/249 (58%), Gaps = 10/249 (4%) Query: 270 SREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLI 329 R++ + +E ++ QP +N Q G E L+RWN+P +G I+P +FIP+AE+ LI Sbjct: 700 ERDLRKAIQNNELIVYYQPKINFSDQSIYGFEALIRWNHPEKGIIAPGLFIPLAEQTSLI 759 Query: 330 VPLTRYVM---AETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ-- 384 + R V+ A+ IRQ + + V +N+ RRG L+ DL+Q + + I Sbjct: 760 SDIGRLVIQQAAKQIRQWNDLGF-NHICVSVNIVAQQLRRGQLLDDLDQ-AIADNQISGA 817 Query: 385 QLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 L LEITE + + + + E+ ++++ +A+DDFGTG SS S+L D LKID+S Sbjct: 818 SLELEITESSLIENSEAVKNLLNEIKQRHIHIALDDFGTGYSSLSYLADFPIDTLKIDRS 877 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F IG + + + ++A+G+ + + +VAEG+ET+EQ +YLR I QGYL+++P+ Sbjct: 878 FVCKIGENK-QAAIVSAMVAMGKAMGMTVVAEGIETEEQLEYLRDLDCDIAQGYLFSKPL 936 Query: 503 PLRDFPKWL 511 P +D +L Sbjct: 937 PEQDATAYL 945 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 146/251 (58%), Gaps = 5/251 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + + + EF LF QP ++ ++ + +G E LLRW +P G + P FIP+AE+ Sbjct: 598 RLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAED 657 Query: 326 HHLIVPLTRYVMAETIRQ-RHVFPMSSQFH-VGINVAPSHFRRGVLIKDLNQYWFSAHPI 383 LIV + +V+ RQ + + H + +N++ F+R +++ +++ S Sbjct: 658 SGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGLA 717 Query: 384 QQLI-LEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 +L+ LEITE A+ D+ + I +L +K +++++DDFGTG SS ++L L D LKID Sbjct: 718 PELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKID 777 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 KSF I +++ + +I+L +L++ +VAEGVET+EQ +L++ QGYL+++ Sbjct: 778 KSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSK 837 Query: 501 PMPLRDFPKWL 511 P+P + K L Sbjct: 838 PLPAEEIEKML 848 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 91/262 (34%), Positives = 151/262 (57%), Gaps = 9/262 (3%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 + + +I L ++EF L+ QP + Q G E L+RW +P+QG ISP FIPIAEE Sbjct: 660 AMANDIRHALTRNEFTLYYQPQV-THDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETG 718 Query: 328 LIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW--FSAHP 382 LI+PL +V+ + + V+ P++ + IN++ F + ++ + + + A+P Sbjct: 719 LILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRANP 778 Query: 383 IQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 +L LE+TE D++ I + +L + V ++DDFGTG SS ++L+ L D LKID Sbjct: 779 -DRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKID 837 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 KSF + +++ ++ + I++L + +N+ ++AEGVETQEQ L +G QGYL+++ Sbjct: 838 KSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSR 897 Query: 501 PMPLRDFPKWLAGSQPPPARHN 522 P+PL FP P A+ N Sbjct: 898 PVPLEAFPFNYPDGIPTTAKTN 919 >UniRef50_B2I7U8 EAL domain protein n=12 Tax=Xanthomonadaceae RepID=B2I7U8_XYLF2 Length = 530 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 97/280 (34%), Positives = 150/280 (53%), Gaps = 21/280 (7%) Query: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 +P+A+L+SL V +A L R + + + + EF + QP+++ +C+G E L+ Sbjct: 251 IPVALLVSLSVSGLAILYLRRRRAPLARLRQAIQRCEFFVCYQPIVSLSDGRCVGAEALV 310 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ-FHVGINVAPSH 363 RW I PD FIP+AE LI+P+T V+A ++R+ ++ + H+ INV+ Sbjct: 311 RWRQQDGTLILPDQFIPLAERSGLILPITDQVIAASMRELGPLLVADRSLHIAINVSVKD 370 Query: 364 FRRGVLI-------KDLNQYWFSAHPIQQLILEITERDALLDVDYRIARE----LHRKNV 412 G L+ +D Y +QL +E TER + D R ARE L Sbjct: 371 IESGRLLDVLALALQDTGLYR------KQLWIEATERSFM---DARAAREHIVRLREAGY 421 Query: 413 KLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELV 472 + IDDFGTG S+ +L+ L D LKIDKSF +G D N+ V II + + L + + Sbjct: 422 AVVIDDFGTGYSNLQYLQQLPLDALKIDKSFIDTVGRDVTNTAVASHIIDIAKELGMRTI 481 Query: 473 AEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512 AEGVE +EQ YLR GV + QG+L++ P+ + +F +L+ Sbjct: 482 AEGVEREEQLVYLRARGVDMAQGWLFSSPLSVAEFVDYLS 521 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 90/253 (35%), Positives = 148/253 (58%), Gaps = 9/253 (3%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 A R+ ++ GL EF L QP ++ + + +G E LLRW NP++G I P FIP+A Sbjct: 691 ADRVEMEEDLRNGLRNDEFFLCYQPQVDNQGR-LLGAEALLRWRNPKRGMIPPSTFIPLA 749 Query: 324 EEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW--F 378 E+ LIV + +VM +Q ++ P++S + +NV+ R+ + + + Sbjct: 750 EDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVT 809 Query: 379 SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 A+P ++L LE+TE + +++ IA+ EL V +IDDFG G SS S+L+ L D Sbjct: 810 GANP-KRLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQ 868 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + +D ++ + IIALG+ LN++++AEGVET Q ++L +G QGY Sbjct: 869 LKIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGY 928 Query: 497 LYAQPMPLRDFPK 509 L+++P+P +F + Sbjct: 929 LFSKPVPADEFER 941 >UniRef50_C5SBB5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBB5_CHRVI Length = 745 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 91/259 (35%), Positives = 132/259 (50%), Gaps = 7/259 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A RM + + + L QP + S IG E LLRW W+ PD FIP Sbjct: 480 AARERMQLLSSLRAAFSAEQLSLVFQPQIELASGPVIGAEALLRWEIEPGRWVPPDQFIP 539 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFS 379 +AE+ LIVPL +V+ RQ H F + +NV+ + FR + L Sbjct: 540 LAEQSGLIVPLGEWVLRTACRQLHRLTERGHTGFRMAVNVSHAQFREPGFVSMLECVLAD 599 Query: 380 AH-PIQQLILEITER---DALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + Q+ LE+TE D + D++ ++A ++ R+ V +AIDDFGTG SS S L L D Sbjct: 600 SRVAASQIELELTESVAMDHIDDINTKLA-DIRRRGVTIAIDDFGTGYSSLSVLRQLNID 658 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + + + +IIALG + N+ L+AEGVE Q + L G QG Sbjct: 659 RLKIDRSFVKELDGTHTKAGIAQLIIALGHQCNLALIAEGVENAVQRRSLLAMGCLEAQG 718 Query: 496 YLYAQPMPLRDFPKWLAGS 514 +L+A+PMP+ W+A + Sbjct: 719 FLFARPMPIEQLEDWMAAA 737 >UniRef50_Q0HY75 EAL domain protein n=2 Tax=Shewanella RepID=Q0HY75_SHESR Length = 518 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 91/272 (33%), Positives = 145/272 (53%), Gaps = 20/272 (7%) Query: 250 LLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNP 309 ++S L W + R+S I G+++ EF + QP+++ RS + +G E+L+RW Sbjct: 252 IVSFLAVIFYWNWQSARVSLGMLIQKGISRKEFIPYYQPIIDCRSGEVVGQEMLVRWRRF 311 Query: 310 RQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVL 369 + P+ FIP AE+ LI+P+T ++ + + P + V N+ H G+L Sbjct: 312 DGVLVQPNQFIPYAEDSGLILPITDLILEQVYQD---LPQLKGW-VSANIVAQHLESGLL 367 Query: 370 IKDLNQYWFSAHP---IQQLILEITERDALLDVDYRIARELHRKNV-----KLAIDDFGT 421 K WFS+H ++++ E+TER + + +A K V +DDFGT Sbjct: 368 SK-----WFSSHSDPRVKRIAFELTERKPITQFELALA---EMKAVLPLCHDFKLDDFGT 419 Query: 422 GNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQ 481 G FS+L+ L + +KIDK FT IG++ + V D IIA G+ +++VAEGVET Q Sbjct: 420 GFGGFSYLQRLGINSIKIDKMFTDTIGTEDLKGAVLDAIIAFGRESQMDMVAEGVETLAQ 479 Query: 482 AKYLRRHGVHILQGYLYAQPMPLRDFPKWLAG 513 +YL GV+ QGY YA+P+ L D ++ G Sbjct: 480 VEYLAAKGVYQHQGYFYAKPLALEDLLQFYQG 511 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 139/258 (53%), Gaps = 5/258 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 LA R++ + L + EF L QP + + IG+E L+RW++P +G +PD FI Sbjct: 388 LAANDRLALETSLRHALEREEFTLHYQPRVRTQDDVMIGMEALVRWHHPDKGLTAPDAFI 447 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LI PL +V+ RQ + H+ +N++ R+ L+ ++ Sbjct: 448 PMAEETGLITPLGLWVLRTACRQAQTWMRLYGEPIHMAVNLSMRQLRQPDLVSQIDAILR 507 Query: 379 -SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + P L LE+TE + + + EL V+LAIDDFGTG SS ++L+ L D Sbjct: 508 DTGLPASSLELELTESVLMAGDGHTLTALAELKALGVRLAIDDFGTGYSSLAYLKRLPID 567 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + I DA + + IIA+ + L +E+VAEGVET EQ +L++ G QG Sbjct: 568 ALKIDRSFVSDIPHDASDMAIASTIIAMARTLGLEVVAEGVETPEQLAFLKKEGCDSYQG 627 Query: 496 YLYAQPMPLRDFPKWLAG 513 + ++ P+ + WL G Sbjct: 628 FGFSPPVDAQAMTLWLDG 645 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 140/260 (53%), Gaps = 7/260 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ + L + EF L QPLL S + +GVE LLRW++P G +SP FIP+AEE Sbjct: 414 RLTLETSLRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEE 473 Query: 326 HHLIVPLTRYVM---AETIRQRHVFPMSSQFHVGINVAPSHFRR-GVLIKDLNQYWFSAH 381 LIVP+ +V+ E +R H + + V +NV+ FR G Sbjct: 474 TGLIVPIGEWVLRSACEQLRALHELGYT-ELCVSVNVSARQFRHDGFCAMVAAVLAAVGL 532 Query: 382 PIQQLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L LE+TE + + I R+L + V LAIDDFGTG SS S+L+ D LKI Sbjct: 533 DPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKI 592 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D++F + D N+ + + I+AL LN+++VAEGVET EQ +L ++QGY A Sbjct: 593 DRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIA 652 Query: 500 QPMPLRDFPKWLAGSQPPPA 519 +P+P R+ ++L Q A Sbjct: 653 RPLPPRNLLEFLEARQEDRA 672 >UniRef50_B2J301 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=8 Tax=cellular organisms RepID=B2J301_NOSP7 Length = 824 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 140/258 (54%), Gaps = 8/258 (3%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ + + EF+++ QP++ + + IG E L+RW +P+ G + P+ FIPIAEE Sbjct: 564 LELEMDLRRAVERQEFQVYYQPIVLLETCKIIGFEALVRWQHPQHGLVPPESFIPIAEET 623 Query: 327 HLIVPLTRYVMAETIRQRHV----FPMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAH 381 LI+PL +V+ E RQ FP + +N++ F + LI+ +NQ +A Sbjct: 624 GLIIPLGYWVLGEACRQMRAWQIQFPTDPPLTISVNLSTKQFLQPDLIEQINQIMQETAL 683 Query: 382 PIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 L LEITE + ++ + +L + N++L +DDFG G SS S+L LKI Sbjct: 684 EASNLKLEITESVLMENIQSATFMLLQLQQMNIQLHLDDFGIGYSSLSYLHRFPSHALKI 743 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF IG++ N + II L + LNI+++AEG+ET EQ LR QGY ++ Sbjct: 744 DRSFITKIGANGENLEIVQAIITLAESLNIDVIAEGIETVEQLSQLRAMKCKYAQGYFFS 803 Query: 500 QPMPLRDFPKWL-AGSQP 516 QP+ + + +G QP Sbjct: 804 QPLDSKSIETLIVSGIQP 821 >UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98BI1_RHILO Length = 514 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 134/248 (54%), Gaps = 13/248 (5%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 +R E++ + +F+L QP L+ + + IG E L+RWN+P +G I P FI IAE Sbjct: 254 HRQWVESELHTAFERGDFDLHYQPQLDLPTGRIIGYEALIRWNHPERGMIPPMEFIQIAE 313 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDL-----NQYWFS 379 E +I P+ +V+ + H P V +N++P F + KD + + Sbjct: 314 ETGMINPIGEWVLRKACSDAHHLP--DDCFVAVNISPVQF----MTKDFVGIVRDTMRAT 367 Query: 380 AHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 +L LE+TE + D D A +EL + +A+DDFGTG S+ S+L L Sbjct: 368 GIKPSRLELEVTETAMMQDRDRAAAILKELAEMGISVAVDDFGTGYSNLSYLIDFSFGKL 427 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + IG+D+ + V I+ L + L + ++AEGVET+ QA LR G ++QGYL Sbjct: 428 KIDRSFVSRIGTDSSSGAVVSTIVGLSRALGVSIIAEGVETESQATLLRAAGCEVVQGYL 487 Query: 498 YAQPMPLR 505 + +P PL+ Sbjct: 488 FGRPAPLK 495 >UniRef50_A8V4T8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4T8_9AQUI Length = 351 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 136/236 (57%), Gaps = 4/236 (1%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L + EF QP+++ + +G E L+RW + + G++SP FIP+AEE LI+ + Y Sbjct: 105 ALGKEEFFFVYQPIIDLNTNNIVGAEALIRWQSEKLGFVSPAKFIPLAEESDLILEIDEY 164 Query: 336 VMAETIR--QRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITER 393 V+ + + ++ + + ++ +N + FR+G++ K L++ + + + LEITER Sbjct: 165 VLRKNLEFVEKLMRGNINHLNIALNFSAKFFRKGLVYKKLSEIIKDKNICRCIELEITER 224 Query: 394 DALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + + DV+ + L K++IDDFGTG SS S+L+ L D+LKID SF I D Sbjct: 225 EIMQDVEENLKTLNLLKSMGFKISIDDFGTGYSSLSYLKKLPIDLLKIDISFIRDIPEDM 284 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 + +T II + L ++ +AEG+E +EQ +L+ G QGY +++P+P ++F Sbjct: 285 NDVVITKTIINMAHNLGLKTIAEGIEREEQLYFLKDEGCDYGQGYYFSKPLPEKEF 340 >UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXD5_MARAV Length = 709 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 93/247 (37%), Positives = 138/247 (55%), Gaps = 9/247 (3%) Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 EI+ L EFEL+ QP L Q I E L+RWN+P +G I+P F+P HL +P Sbjct: 439 EISRALENEEFELYFQPQLRMADCQVIAFEALIRWNHPEKGLIAPGAFLPAVANSHLEIP 498 Query: 332 LTRYVMAETIRQRHVFPMSSQ-FHVGINVAPSHFRRGVLIKDLNQYWFSAHPI---QQLI 387 L ++V+ E I Q + + + + V IN++ H + L Y +HP Q+ Sbjct: 499 LGQWVLKEAIHQMNRWREAGEALAVSINISAPHLMDRKFVDYLEGY-LQSHPEVSPGQIT 557 Query: 388 LEITERDALLDVDYRIARELHRK---NVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFT 444 LE+ E AL D R + L R +++A+DDFGTG SS ++L TL DV+KID+SF Sbjct: 558 LEVLESTALEDTK-RASNVLARCQSLGLQVALDDFGTGFSSLTYLRTLPVDVIKIDQSFV 616 Query: 445 AAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPL 504 + +DA + + + +I L QR + ++AEGVET + A LR G +++QGY A+PMP Sbjct: 617 RNMLTDANDRAIVESVIFLAQRFDHPVLAEGVETMDHAAALRDMGCNLVQGYGIARPMPS 676 Query: 505 RDFPKWL 511 +WL Sbjct: 677 GAVLEWL 683 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 90/262 (34%), Positives = 145/262 (55%), Gaps = 5/262 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+S R + + ++ L QP ++ + + G+E L+RWN+P QG +SP FIPIAEE Sbjct: 1010 RLSLERALRQAVECNQLTLHYQPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEE 1069 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSAHPI 383 LI+ + +VM + SS+ V IN++ F+ +L+ L + + Sbjct: 1070 TGLIITIGEWVMQQACMDAKRLARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLA 1129 Query: 384 QQLI-LEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 +L+ +EITE A+ DV+ I + EL VK++IDDFGTG SS S+L+ L + LKID Sbjct: 1130 PELLEVEITESLAMGDVNRTIEQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKID 1189 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 KSF + D+ ++ + I+++ L + +VAEGVE Q Q +L +QGY +++ Sbjct: 1190 KSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSK 1249 Query: 501 PMPLRDFPKWLAGSQPPPARHN 522 P+P F K+L P +H+ Sbjct: 1250 PLPFEAFEKFLLDWDPVKMKHS 1271 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 92/271 (33%), Positives = 150/271 (55%), Gaps = 8/271 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ +E++ L Q +F L+ QP +N + GVE L+RW + ++G ISP FIP+AEE Sbjct: 800 RLALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFIPVAEE 859 Query: 326 HHLIVPLTRYVMAETIRQ--RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHP 382 LIVP+ +++ + R + F V +N++ F+ L++ +++ SA Sbjct: 860 TGLIVPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNSAID 919 Query: 383 IQQLILEITERDALLDVDYRIARELHRKN--VKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L EITE + +V+ I + +N V LAIDDFGTG SS S+L+ + LKID Sbjct: 920 PSMLEFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTLKID 979 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF +G D+ ++ + II++ Q LN+ +VAEG E EQ +L+ G +QGY +++ Sbjct: 980 QSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYYFSR 1039 Query: 501 PMPLRDFPKWLA---GSQPPPARHNGHITPI 528 P+P D + L G + PP G + + Sbjct: 1040 PLPQTDLERLLKDPNGIKMPPTVEMGKLVEV 1070 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 88/247 (35%), Positives = 140/247 (56%), Gaps = 5/247 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + A R+ ++ G+ + EF L+ QP + + + VE L+RWN+P +G + P FIP Sbjct: 432 SAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIP 491 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKD-LNQYWF 378 AEE LI+PL R++M R+ ++ + S+ V +N++ F L+K+ L+ Sbjct: 492 RAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEILDALES 551 Query: 379 SAHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S P + L LEITE + D + R + +K V +AIDDFGTG SSFS+L+ D Sbjct: 552 SGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLDR 611 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF I + ++ + II LG LN++++AEGVE+Q Q + L+ QG+ Sbjct: 612 LKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQGF 671 Query: 497 LYAQPMP 503 ++P+P Sbjct: 672 FNSRPLP 678 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 141/258 (54%), Gaps = 11/258 (4%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A A R+ ++ L++ E QP + + + IGVE L+RWN QG ISP FIP Sbjct: 447 AAAERLRLEHDLRGALSRDEIFPLYQPQIELATGRVIGVEALMRWNRAGQGLISPASFIP 506 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFH--VGINVAPSHFRRG----VLIKDLNQ 375 +AE+ LI+ L Y++ + Q + F + +NV+ FR+ V+++ L++ Sbjct: 507 VAEDSGLILALGEYILRKACLQARQWHEHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSE 566 Query: 376 YWFSAHPIQQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLR 433 F P + L LE+TE + ++ + + L +KLAIDDFGTG SS S+L Sbjct: 567 TGF---PPECLELEVTESVVMQGLESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQFA 623 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D LKID+SF + DA + I+A+G+ L + ++AEGVET+ QA++L+ Sbjct: 624 IDRLKIDQSFVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVETEAQARFLQDIECTES 683 Query: 494 QGYLYAQPMPLRDFPKWL 511 QGYLYA+PM DF WL Sbjct: 684 QGYLYARPMKSNDFEAWL 701 >UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter RepID=B8H1B9_CAUCN Length = 842 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 91/249 (36%), Positives = 133/249 (53%), Gaps = 5/249 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R + ++ LA+ E +LF QPL+ R + G E LLRW +P +G + P FI AE+ Sbjct: 569 RRALEMDLREALARDELKLFFQPLIGRRDNETTGFEALLRWQHPTRGLVPPSDFIECAEQ 628 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQ 384 LI + +V+ E R +P S V +N++P+ F G L+ + S Sbjct: 629 WGLIGRIGEWVLNEACRTAATWP--SHLTVAVNLSPNQFASGDLVDQVRAALKASGLAPA 686 Query: 385 QLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 +L LEITE L D + + L VK+A+DDFGTG SS ++L D +KID+S Sbjct: 687 RLELEITEGLLLHDSAKTLEQLAALKALGVKIAMDDFGTGYSSLAYLWRFPFDKIKIDRS 746 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F A + + + + I LGQ LN+E+ AEGVETQ QA+ L QG+L+ +PM Sbjct: 747 FVAEMQDNVAIADILRTIALLGQTLNLEVTAEGVETQAQARLLAEMRCDQFQGFLFGRPM 806 Query: 503 PLRDFPKWL 511 P+ D P +L Sbjct: 807 PVGDIPSFL 815 >UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gammaproteobacteria RepID=B9ZNJ0_9GAMM Length = 706 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 86/249 (34%), Positives = 137/249 (55%), Gaps = 5/249 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T +R+ +++ L + EF + QP ++ + Q +GVE L+RWN+P +G + P FIP+ Sbjct: 445 TPHRLQLEQDLRKALEREEFHILYQPQVDGETGQLLGVEALVRWNHPDRGMLGPAEFIPV 504 Query: 323 AEEHHLIVPLTRYVMAETIRQ-RHVFPMSSQFHVGINVAPSHFRRGVLIKD-LNQYWFSA 380 AE+ LIV L R + + R + +N++P R + L + Sbjct: 505 AEDTRLIVDLDRATLRNALGDIRKAHQHVPNLRLAVNLSPVLIERDDFVDGVLGLLVETG 564 Query: 381 HPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P + L +EITE + D +A+ L V++A+DDFGTG SS S+L+ L LK Sbjct: 565 FPAELLEIEITESLLMSDTHDTVAKLNRLCEAGVQVAVDDFGTGYSSLSYLQKLPVHTLK 624 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SFT I +D + + + I+++ + L + +VAEGVET Q +YLRR G ++QG+L+ Sbjct: 625 IDRSFTLTICTDG-EACIVNAIVSMARGLQMNIVAEGVETAAQQEYLRRLGCPMMQGFLF 683 Query: 499 AQPMPLRDF 507 P PL D Sbjct: 684 GHPSPLADL 692 >UniRef50_A7K1R0 Rtn protein n=3 Tax=Vibrio RepID=A7K1R0_VIBSE Length = 490 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 147/272 (54%), Gaps = 16/272 (5%) Query: 240 YLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIG 299 Y +P+ ++ L + + +R S ++ + + E L+ QP +N + Q G Sbjct: 215 YFLYSIPIIFVIYLCLYALNKFIDPHR-SLVLDLKKAIKKGELTLYYQPQINVDTGQLFG 273 Query: 300 VEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINV 359 E L+RW + +G+ISPD F+P AE+ L+ LT YV+ + + H+GINV Sbjct: 274 FEALVRWEHQNKGFISPDEFVPAAEQSGLVFLLTDYVLDKAAEDFSKLDFNQSVHLGINV 333 Query: 360 APSHF------RRGVLI-KDLNQYWFSAHPIQQLILEITERDALLDVDYR-IARELHRKN 411 P + R+ LI + L+Q S L +EITER L+D + R L Sbjct: 334 PPGYLVGPNAIRKIQLIDRKLSQNNVS------LGIEITERQ-LIDAEARKCIAALRVHG 386 Query: 412 VKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIEL 471 + + IDDFGTG +S ++L+ +R D LKIDK F IG +++++V I+ + L ++L Sbjct: 387 IDVLIDDFGTGQTSLAFLQHMRIDYLKIDKCFVETIGIPSLSASVLKAIVHFAEELKVQL 446 Query: 472 VAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 +AEGVET QA +L++ GV QGY Y++P+P Sbjct: 447 IAEGVETTAQADHLKKMGVRYHQGYFYSKPLP 478 >UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='Nostoc azollae' 0708 RepID=B9YGE9_ANAAZ Length = 637 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 91/249 (36%), Positives = 137/249 (55%), Gaps = 10/249 (4%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L + EF+++ QP +N+ + + +E LLRW +P G I P FIPIAEE LI+P++ + Sbjct: 381 ALERQEFKVYYQPQVNSSTGEITKMEALLRWQHPELGLIPPATFIPIAEETGLILPISEW 440 Query: 336 VMAETIRQRHVFPMS---SQFHVGINVAPSHFRRGVLIKDLNQYWFS---AHPIQQLILE 389 V+ Q + + S V +N + F++ L+ + Q AH + L LE Sbjct: 441 VLKTACLQNKAWQQTLNLSSLSVAVNFSGRQFQQPNLVGIVEQVLCETKLAH--RYLELE 498 Query: 390 ITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 ITE A+ DV+ +I R+L V ++IDDFGTG SS S+L+ LKID+SF + Sbjct: 499 ITETVAMQDVELTQKILRQLDEMGVTISIDDFGTGYSSLSYLKDFSIHALKIDQSFVQDL 558 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 + + +T II+L LN+ +VAEGVETQEQ LR I+QGY ++ P+ + Sbjct: 559 ANKDHQTAITTAIISLAHGLNLSVVAEGVETQEQLNALRILQCEIMQGYFFSHPLSAEEA 618 Query: 508 PKWLAGSQP 516 + L QP Sbjct: 619 TRMLTAYQP 627 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 85/255 (33%), Positives = 147/255 (57%), Gaps = 13/255 (5%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ +++ L ++E L QP+++ ++++ +G E LLRW++ G ISP+ FIP+AE Sbjct: 629 RLQLEEQLHNALDRNELRLLYQPVVDLKTRKIVGAEALLRWDSKELGAISPEEFIPVAEH 688 Query: 326 HHLIVPLTRYVMAETIR--QRHVFPMSSQFHVGINVAPSHFRRGVLIKDL----NQYWFS 379 LIV + ++V+ + +R R + FH+ IN++P FR LI ++ N Y Sbjct: 689 TGLIVEIGKFVLDDALRTTSRWIKTFIPDFHIAINLSPRQFRDPHLIDNIESFVNSYGLE 748 Query: 380 AHPIQQLILEITERDAL---LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 ++ LEITE + DV+ IA+ L +K + +++DDFGTG SS S+L + ++ Sbjct: 749 GRNLE---LEITEGVLMSQHADVEEAIAK-LTQKGISISMDDFGTGYSSLSYLRSYPFNI 804 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LK+D+SF I DA + + + I + L ++++AEGVET+EQ L R + QGY Sbjct: 805 LKVDRSFINDISVDAADLELVNASIDMAHGLGLKVIAEGVETEEQTALLLRKNCDMAQGY 864 Query: 497 LYAQPMPLRDFPKWL 511 +++P+P + + L Sbjct: 865 YFSKPIPADELEEIL 879 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 145/246 (58%), Gaps = 7/246 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ + L +FEL+ QP ++ + + +G E L+RWN+ ++G I PD FIP+AEE Sbjct: 633 RLLMENNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEE 692 Query: 326 HHLIVPLTRYVMA---ETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHP 382 LI+PL + ++A +TI + H +++ + INV+ R +LN + Sbjct: 693 TGLIIPLGKQIIAMASQTISEWHQANLTNA-RIAINVSAKQLRDSRFFHNLNTALNKNNC 751 Query: 383 IQQLI-LEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 I +EITE + ++ ++ +L RK + ++IDDFGTG SS ++L+ L +KI Sbjct: 752 QPDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKI 811 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + + D ++ +T II++ Q LN++++AEG+ETQEQ ++ + G ++QGY Y+ Sbjct: 812 DRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYS 871 Query: 500 QPMPLR 505 +P+ + Sbjct: 872 RPLTKK 877 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 143/242 (59%), Gaps = 8/242 (3%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L + EFEL+ QP L+ +++Q VE L+RWN+P +G+ISP +FIP+AEE LI P++ + Sbjct: 323 ALERGEFELYYQPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGLITPISDW 382 Query: 336 VMAETIRQRHVFPMSSQF---HVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLI-LEIT 391 +M + H+ + +F + IN++P +F++ +K L + S + +LI LE+T Sbjct: 383 IMMQACE--HLKQLQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVNPRLIELELT 440 Query: 392 ERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGS 449 E + + + R +L + +AIDDFGTG SS S+L D+LKID+SFT + Sbjct: 441 ESAVMPHAEQSVERLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKIDRSFTKQLSR 500 Query: 450 DAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPK 509 +S + II + L I +VAEGVET++Q + L + +QGY ++P+ + + + Sbjct: 501 YQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSKPLSISELYE 560 Query: 510 WL 511 +L Sbjct: 561 FL 562 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 140/254 (55%), Gaps = 10/254 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNP-RQGWISPDVFIPIAE 324 RM+ + + EFEL+ QP + A + +G E L+RW P R G +SP FIP+AE Sbjct: 796 RMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAE 855 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAH- 381 E LI+P+ +V+ + RQ ++ + + +N++ F++ L ++N W Sbjct: 856 ETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEIN--WILQEI 913 Query: 382 --PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P + L LEITE + DV A +L + LA+DDFGTG SS S+L+ D L Sbjct: 914 GLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTL 973 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+ F + +D + V II L L +E+VAEGVE +Q +LR+ G + QGY Sbjct: 974 KIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYH 1033 Query: 498 YAQPMPLRDFPKWL 511 +++P+P ++F ++L Sbjct: 1034 FSRPLPAKEFEQFL 1047 >UniRef50_A0NTQ4 Sensory box/GGDEF family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NTQ4_9RHOB Length = 1042 Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 7/242 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R + +++N L++ EFELF QP + + + + E L+RWN+P +G +SP FI +AE Sbjct: 767 RRALEKDMNTALSEGEFELFFQPRMCLATARIVSYEALIRWNHPDRGLVSPGEFISVAET 826 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQ-YWFSAHPIQ 384 IVP+ +YV+AE +R S+ + INV+P FR + D+ + S P + Sbjct: 827 SGQIVPIGKYVLAEALRIAAKTITSAS--ISINVSPVQFRDRDFVDDVRRAIETSGVPAE 884 Query: 385 QLILEITERDALLDVDYR---IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 ++ LEITE + L++ D R + + L VK+A+DDFG G SS S+L D +KID+ Sbjct: 885 RIELEITE-NTLIEDDARALAVLKRLKEIGVKIALDDFGVGYSSLSYLSRFPFDCIKIDR 943 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + + + + + ++ LG+ L + +VAEGVE E+ + + G H QGYL P Sbjct: 944 SFVSEAQHNYGSLAIIETVVRLGKALKMRVVAEGVEDTEKLCLVAQRGCHEAQGYLIGMP 1003 Query: 502 MP 503 P Sbjct: 1004 AP 1005 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 87/238 (36%), Positives = 138/238 (57%), Gaps = 6/238 (2%) Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L ++EF+L+ QP + + + IG E LLRW +P++G I P FIP+AEE LIV + + Sbjct: 993 ALEKNEFQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHW 1052 Query: 336 VMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGV-LIKDLNQYWFSAHPI-QQLILEIT 391 V+AE RQ ++ + +N++ F +G LI+ + + + QL LE+T Sbjct: 1053 VLAEACRQSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELT 1112 Query: 392 ERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGS 449 E + D R R++ + V L++DDFGTG SS ++L + D LKID+SF I S Sbjct: 1113 ESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIAS 1172 Query: 450 DAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 DA ++ + + IIA+ L ++ VAEGVE +Q + G + +QGYL+++P+P DF Sbjct: 1173 DASSAAILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDF 1230 >UniRef50_B5VUP3 Diguanylate cyclase/phosphodiesterase n=3 Tax=Oscillatoriales RepID=B5VUP3_SPIMA Length = 845 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 88/246 (35%), Positives = 141/246 (57%), Gaps = 9/246 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ ++ L +++ EF ++ QP+++ ++ + +G E L+RW +PRQG ++P+ F+ +A+E Sbjct: 585 RLQLETDLRLAVSRGEFVMYYQPVISLKTGEIVGFEALVRWQHPRQGLVTPERFLKVAKE 644 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMS----SQFHVGINVAPSHFRRGVLIKDLNQ-YWFSA 380 LI+P+ R+ M E Q ++ S Q VG+N++ F L+ ++ S Sbjct: 645 TGLIIPIGRWAMQEACHQLAIWQQSLKSNCQIIVGVNLSGRQFIHPDLVDEIKGIIQDSG 704 Query: 381 HPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LEITE + DV+ R+ +L +KL+IDDFGTG SS +L DVLK Sbjct: 705 IDPSGLRLEITESVIMDDVEATIRLLHQLKNLQIKLSIDDFGTGFSSLGYLPRFPVDVLK 764 Query: 439 IDKSFTAAIG--SDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 ID+SF A IG ++ N + I+ L Q LN++ +AEGVET EQ + LR G QGY Sbjct: 765 IDRSFIAHIGEATEVENLAIVRTILMLAQALNLDAIAEGVETFEQLEQLRSLGCEYAQGY 824 Query: 497 LYAQPM 502 + +P+ Sbjct: 825 YFQRPI 830 >UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 Tax=Comamonas testosteroni RepID=D0IZ49_COMTE Length = 1115 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 89/248 (35%), Positives = 143/248 (57%), Gaps = 8/248 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R + +++ GL EFELF QP + IG E LLRW +P +G++ P FIP+AEE Sbjct: 847 RRTLEQDMRAGLQAGEFELFYQP--QVEMGKVIGAEGLLRWKHPEKGFVPPAHFIPLAEE 904 Query: 326 HHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRR-GVLIKDLNQYWFSAH 381 +I+PL +V+ +Q + P +Q + +NV+P F + G + + L Sbjct: 905 TGVILPLGDWVLQAACQQLAKWAKHPRYAQLVLSVNVSPKQFHQSGFVEQVLKALAEHGA 964 Query: 382 PIQQLILEITERDALLDVDYRIARELHRKN--VKLAIDDFGTGNSSFSWLETLRPDVLKI 439 ++L LE+TE + DVD IA+ + K+ + ++DDFGTG SS S+L+ L D LKI Sbjct: 965 DARRLKLELTEGMLVSDVDDTIAKMMRLKSYGIGFSLDDFGTGYSSLSYLKRLPLDQLKI 1024 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + +D ++ + I+AL + L++ ++AEGVETQ Q ++L + QGYL + Sbjct: 1025 DRSFVRDVLTDPNDAAIARTIVALAKSLSLHVIAEGVETQAQCRFLEGIRCYAWQGYLMS 1084 Query: 500 QPMPLRDF 507 P+P+ +F Sbjct: 1085 PPVPVSEF 1092 >UniRef50_Q082T6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=21 Tax=Shewanella RepID=Q082T6_SHEFN Length = 734 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 91/253 (35%), Positives = 141/253 (55%), Gaps = 12/253 (4%) Query: 271 REINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIV 330 R+++ + EFEL+ QPL++ ++ + IG E L+RWN+P++G + P FI IAE+ +I Sbjct: 482 RDLHHAIRGREFELYYQPLMDLQNNKYIGAEALIRWNHPKKGVLYPGAFIEIAEQTGMIN 541 Query: 331 PLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW-----FSAHPIQ 384 + +V+ +Q +++ + + +NVA F G L + Q W + P + Sbjct: 542 QIGEWVLETACKQLNLWQHKNVNIAMHVNVAARQFFSGNLYE---QVWRLITRYHIKP-K 597 Query: 385 QLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 LILEITE + + D+ Y I EL V LAIDDFGTG SS +L+ LKID+S Sbjct: 598 TLILEITETELMGDIRYAINLCHELAELGVGLAIDDFGTGYSSMKYLKQFPISKLKIDRS 657 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F I S + + IIA+ + LNI L AEGVET+EQ ++L H QG+LY+ + Sbjct: 658 FIMDISSSHESREIVSAIIAMAKALNISLTAEGVETKEQEEFLTLSACHHAQGFLYSPAI 717 Query: 503 PLRDFPKWLAGSQ 515 + DF ++ + Sbjct: 718 RVNDFALFINAHE 730 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 146/258 (56%), Gaps = 9/258 (3%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 LA +S + L +E L+ QPL+ AR+ + +G+E LLRWN+P G I PD FI Sbjct: 557 LAALEHISLEGRLRRALKNNELVLYYQPLVQARTGKIVGLEALLRWNDPLDGIIPPDRFI 616 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LI+PL +V+ E RQ + + + V +NV+ +R L+ ++Q Sbjct: 617 PVAEESGLILPLGEWVLREAGRQLSTWHAAGFTDACVSVNVSAIQLQRQDLVTIVDQV-L 675 Query: 379 SAHPIQ--QLILEITERDALLDVDYRIARELH---RKNVKLAIDDFGTGNSSFSWLETLR 433 + ++ QL LEITE AL+ + + +L+ RK V +++DDFGTG SS S L+ L Sbjct: 676 KDNGLRPWQLELEITET-ALMRIRPEVIGDLNAMRRKGVTISLDDFGTGYSSLSLLQELP 734 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 LKIDKSF + D ++ + ++ + + L ++ AEGVET EQA L G L Sbjct: 735 IGKLKIDKSFVRDMLVDPKDAAIVSAVLFIAKSLGLQSTAEGVETPEQAARLAEEGCDQL 794 Query: 494 QGYLYAQPMPLRDFPKWL 511 QGYL +P+P+ + ++L Sbjct: 795 QGYLLCRPLPVAEMTEFL 812 >UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 Tax=Proteobacteria RepID=A6V697_PSEA7 Length = 858 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/259 (36%), Positives = 136/259 (52%), Gaps = 9/259 (3%) Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 E+ L + EFEL+ QP E L+RW++PR+G I PD FI +AEE LIV Sbjct: 602 ELRAALQRGEFELYYQPRYRTEEGSIASAEALIRWHHPRRGMIGPDEFIGLAEESDLIVQ 661 Query: 332 LTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH-PIQQLILEI 390 + +V+ + +P + V +NV+P+ F G ++ + + AH ++L LE+ Sbjct: 662 IGNWVLRQACSSAASWP--GEVMVSVNVSPAQFISGDIVWQVREALRLAHLDARRLELEV 719 Query: 391 TERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIG 448 TE L DVD R L V+L +DDFGTG SS +L T D +KIDK F A + Sbjct: 720 TENVMLNDVDGALRTMTALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFIANME 779 Query: 449 SDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFP 508 + ++ II LG LN+ + AEGVET+ Q + LR H LQG+L ++P+ + Sbjct: 780 KTGRDRSIVQAIINLGNALNLRVTAEGVETEGQMRILRDEKCHELQGFLLSRPVDGQRLQ 839 Query: 509 KWLAGSQ---PPPARHNGH 524 L PPPAR GH Sbjct: 840 ALLRSETALAPPPAR-TGH 857 >UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT Length = 595 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 144/253 (56%), Gaps = 9/253 (3%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ ++ G+ + EFE++ QP++N + +G E L+RW +P +G+ISP FIP+AE Sbjct: 340 LTLETDLRYGIEKQEFEVYYQPIMNLNPIKLVGFEALIRWQHPDKGFISPGEFIPVAENT 399 Query: 327 HLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 LI+P+ + V+ + +Q + F + + +N++ F+ +++++++ + Sbjct: 400 GLIIPIGKIVLEKVCQQIQTWKKKFQQITILKIAVNLSSKQFKNAYILQEIDEVMERTGL 459 Query: 382 PIQQLILEITERDALLD---VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LEITE +L+D ++ ++L ++N+++ +DDFGTG SS S+L D LK Sbjct: 460 TSNNLKLEITET-SLIDHSQETIKLLKQLKQRNLEICLDDFGTGYSSLSYLHRFPVDTLK 518 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF IG N + II L L + +VAEG+ET+EQ YL++ QGYL+ Sbjct: 519 IDRSFINCIGQPEENLEIIQSIIHLAHNLGMNVVAEGIETEEQLIYLQKLNCDFGQGYLF 578 Query: 499 AQPMPLRDFPKWL 511 +P+ ++ L Sbjct: 579 NRPLTAQETENLL 591 >UniRef50_B1J9N2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pseudomonas RepID=B1J9N2_PSEPW Length = 533 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 96/253 (37%), Positives = 128/253 (50%), Gaps = 7/253 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ R + L +EFEL+ QP ++ S GVE LLRW +P G +SP FIP+AE Sbjct: 271 RLELERNLRRALQANEFELWYQPKVDLFSGCLQGVEALLRWRDPVHGLVSPAEFIPLAER 330 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFH--VGINVAPSHFRRGVLIKDLNQYWFSAHPI 383 LI+PL V+A Q + + + INVA R + L Q H + Sbjct: 331 TGLIIPLGERVLALACAQMAAWRDEDRIPGPMAINVAALQIERSDYVSSLAQA-LECHGL 389 Query: 384 QQLILEITERDALLDVDYRIARE----LHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 +LE+ ++LL + A E L V A+DDFGTG SS ++L L D LKI Sbjct: 390 APSLLEVEITESLLMESQQQACEVLAQLQAMGVTTAVDDFGTGYSSLAYLRALPIDHLKI 449 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D++F + D V II LG L + AEG+ETQEQ +LR G QGYL A Sbjct: 450 DRAFIKDLPDDDDAVAVARAIIDLGHALGFRITAEGIETQEQYDFLRNAGCDQGQGYLLA 509 Query: 500 QPMPLRDFPKWLA 512 +PMP D +WLA Sbjct: 510 RPMPAADLARWLA 522 >UniRef50_A3XSN8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Vibrio sp. MED222 RepID=A3XSN8_9VIBR Length = 526 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 85/253 (33%), Positives = 139/253 (54%), Gaps = 8/253 (3%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R++ +EIN + EF + QP ++ + IG E L+RW P + PD+FI Sbjct: 259 AALRRITLIKEINNAIENREFIPYYQPQFCLKTNRIIGAEALMRWKKPNGDLVRPDLFIE 318 Query: 322 IAEEHHLIVPLTRYVMAET---IRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AE+ HLI+P+ ++ + +Q + V +N++ F ++ DL Q Sbjct: 319 LAEQSHLIIPMGAHIFEQATTDCQQWQNHKALAGVKVAVNISSIQFSEQNIL-DLTQLTL 377 Query: 379 SAHPIQ--QLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 + L LE+TE L DV +A +L + N+++A+DDFGTG SS S+L+ L Sbjct: 378 EKTGLSPSLLELEVTESAMLGDVSKVVAVLNDLKKLNIEIALDDFGTGYSSLSYLKLLPI 437 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID+ F + S+ + + +I L L++ ++AEG+E +EQ ++L R G H +Q Sbjct: 438 DRLKIDREFVKDLLSNTDDQAILSMICKLATELSLNVLAEGIEEKEQLEFLGRAGCHEVQ 497 Query: 495 GYLYAQPMPLRDF 507 G+ +A+PMPL DF Sbjct: 498 GFYFAKPMPLDDF 510 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/249 (36%), Positives = 142/249 (57%), Gaps = 11/249 (4%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 M + L L + EF L+ QP ++ S + G E L+RW +PR+G ++P FIP+AEE Sbjct: 447 MEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEET 506 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRG---VLIKD-LNQYWFSA 380 LIVP+ +V+ E RQ + +V +N++ FR G L+++ L + Sbjct: 507 GLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDP 566 Query: 381 HPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 H ++ LE+TE + D +A EL V+L++DDFGTG SSF+ L + LK Sbjct: 567 HLLE---LEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLK 623 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF I +D ++T+ IIA+ R+ ++ +AEGVET+ Q YLR+ G +QGYL Sbjct: 624 IDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLL 683 Query: 499 AQPMPLRDF 507 ++P+P ++ Sbjct: 684 SRPLPASEY 692 >UniRef50_C6P1V2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1V2_9PROT Length = 690 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/246 (36%), Positives = 137/246 (55%), Gaps = 7/246 (2%) Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 E+ L + E L+ QPL+++ S Q G+E L RW++P G + PD FIP+AE+ LI Sbjct: 419 ELRAALGRDELTLYYQPLVDSHSGQIRGLEALSRWHSPLLGTVPPDQFIPVAEQSDLIRI 478 Query: 332 LTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHF-RRGVLIKDLNQYWFSAHPIQQLIL 388 L +V + RQ V+ + + +NV PS F GV+ + P + L + Sbjct: 479 LDEWVFLKACRQLKVWREQLCPDLFMAVNVCPSRFLNAGVVEHTIATLRAQELPPECLEI 538 Query: 389 EITERDALLDVDYRIAR---ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTA 445 EITER L+D D + EL V+++IDDFGTG+SS S+L L DVLKID+SF Sbjct: 539 EITER-MLMDSDPIVRERLTELRNHGVRISIDDFGTGHSSLSYLSRLPVDVLKIDRSFVQ 597 Query: 446 AIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLR 505 + S + S + + I+A+ +L + +VAEGVE + + ++L G +LQGYL P P Sbjct: 598 NVTSSSEQSVLVEAIVAMAGKLGLHVVAEGVEQESEKRFLMSCGCDLLQGYLIGHPEPPE 657 Query: 506 DFPKWL 511 + + L Sbjct: 658 NIAQLL 663 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 5/245 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T R+ + L Q+EF L QPL+N + IGVE L+RW +P G I PD FI + Sbjct: 324 TLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIHV 383 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDL-NQYWFS 379 AEE LI P+ +V+ E RQ + + + +NVAP FR+ ++ + S Sbjct: 384 AEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALATS 443 Query: 380 AHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 +L LE+TER + D D + LHR V+L++DDFGTG SS ++L+ L Sbjct: 444 GLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKL 503 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +D + + I+++G+ L + ++AEGVE EQ LR+ G + QGY Sbjct: 504 KIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYY 563 Query: 498 YAQPM 502 +++PM Sbjct: 564 FSRPM 568 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 140/250 (56%), Gaps = 9/250 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ E+ + + + +F L+ Q +++ + +G E L+RW NP G + P FIPIAEE Sbjct: 335 RITLENELRIAIEKSQFHLYYQIQMDS-DNRVLGAEALIRWTNPEHGLVLPATFIPIAEE 393 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQ---FHVGINVAPSHFRRGVLIKDLNQYWFSAHP 382 LI+ + ++V+ Q V+ SQ + +NV+ FR+ + D Q H Sbjct: 394 TGLILSIGKWVIETACAQIKVWQKKSQTRDLTLAVNVSAKQFRQKDFV-DQVQSAVQRHA 452 Query: 383 I--QQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 I L LE+TE D + IA + L++ V+ ++DDFGTG SS +L+ L D K Sbjct: 453 IPGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSSLQYLKRLPLDQFK 512 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF I +D + + IIA+ Q L+I+++AEGVET+EQ + L G + QGYL+ Sbjct: 513 IDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLLLGKGCTLYQGYLF 572 Query: 499 AQPMPLRDFP 508 ++P+P+ F Sbjct: 573 SKPIPIDQFD 582 >UniRef50_A1SBS3 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1SBS3_SHEAM Length = 709 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 151/272 (55%), Gaps = 19/272 (6%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R++ ++ G+ ++EF LFCQP ++A + C G E+L+RW +P +G + P+ FIP Sbjct: 441 AVEERVALENDLRNGVLENEFRLFCQPQVDACGRLC-GGEVLIRWQHPVRGLVMPNQFIP 499 Query: 322 IAEEHHLIVPLTRYVM---AETIRQRHVFPMSSQFHVGINVAPSHFRRG-------VLIK 371 +AE+ LI+P+ +V+ ET+ + P +Q + +NV+ + R +I Sbjct: 500 LAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQISLSVNVSVNQVRDHNFVERVLAIID 559 Query: 372 DLNQYWFSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWL 429 D A+P +++LE+TE +V+ I + L + V+ ++DDFGTG SS S+L Sbjct: 560 DC-----GANP-ARIMLELTESLMAENVEEIILKMNALRVRGVRFSVDDFGTGYSSLSYL 613 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + LKID+SF I + ++ +T+III L ++L + ++AEGVET++Q +L H Sbjct: 614 KRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGLGVLAEGVETEDQLNFLLAHD 673 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGSQPPPARH 521 QGYL+ +P + F P +RH Sbjct: 674 CSYFQGYLFGKPCAIELFASSFMDLMEPVSRH 705 >UniRef50_D0HDR4 Rtn protein n=5 Tax=Vibrio RepID=D0HDR4_VIBMI Length = 532 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 100/268 (37%), Positives = 146/268 (54%), Gaps = 17/268 (6%) Query: 245 LPLAVLLSLL--VGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEI 302 +P+A+LL L+ +GY+ + YR S I GL EF QP++++R+Q+ +G E+ Sbjct: 255 IPIALLLGLVLSIGYL--ILRNYRNSIEGLIEKGLRDEEFIPHYQPIIDSRTQEIVGYEV 312 Query: 303 LLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPS 362 LLRW Q + P +FI AE L+V +T +M + R P S V INV Sbjct: 313 LLRWQKGHQ-LVPPGLFISAAESSGLVVKITHQLMQQVYRDLTQIPESR--WVSINVVAD 369 Query: 363 HFRRGVLIKDLN--QYWFSAHPIQQLILEITER---DALLDVDYRIARELHRKNVKLAID 417 H + L + L Q+ +S ++L E+TER A+ + L +K + ID Sbjct: 370 HLEQHHLSRFLEKLQWPYS----ERLKFELTERVPIKAMTQAQEEVFY-LLKKGYQFKID 424 Query: 418 DFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVE 477 DFGTG F++L+ L+ +KIDK F I + V +V D IIA ++ NIE++AEGVE Sbjct: 425 DFGTGYGGFAYLQNLQIASIKIDKMFVDTIETSDVKISVLDSIIASAKQGNIEVIAEGVE 484 Query: 478 TQEQAKYLRRHGVHILQGYLYAQPMPLR 505 Q Q YL GV+ +QGY YA+PMPL Sbjct: 485 RQNQVDYLAERGVYWIQGYFYAKPMPLE 512 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 140/246 (56%), Gaps = 11/246 (4%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ ++ + EF ++ QP++ + +G E L+RW +P++G+ISP FIPIAEE Sbjct: 340 LNLETDLRRAIENQEFLVYYQPIMALEKTKIVGFEALIRWQHPKKGFISPGEFIPIAEET 399 Query: 327 HLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAH 381 LI+P+ + V+ E +Q + P + + +N++ + +++ ++ + Sbjct: 400 GLIIPIGQIVLKEACQQLKTWQEKLPKAKNLTISVNLSSQQLKEPEILQHIDHSLNVTGL 459 Query: 382 PIQQLILEITERDALL----DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L LEITE +LL DV + R+L + +++++DDFGTG SS S+L D L Sbjct: 460 QPESLKLEITE--SLLMENADVATTLLRQLKERKIQISLDDFGTGYSSLSYLHRFPVDTL 517 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF IG N T+ I+AL L++++VAEG+ET++Q +L+ QGY Sbjct: 518 KIDRSFVNCIGKPEENLTIIQSIMALAHNLDMDVVAEGIETEKQLTFLKFLECEFGQGYF 577 Query: 498 YAQPMP 503 +++P+P Sbjct: 578 FSKPLP 583 >UniRef50_B7VQ16 Putative uncharacterized protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQ16_VIBSL Length = 731 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/253 (33%), Positives = 139/253 (54%), Gaps = 8/253 (3%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R++ +EIN + EF + QP ++ + IG E L+RW P + PD+FI Sbjct: 464 AALRRITLIKEINNAIENREFIPYYQPQFCLKTNRIIGAEALMRWKKPNGDLVRPDLFIE 523 Query: 322 IAEEHHLIVPLTRYVMAET---IRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AE+ HLI+P+ ++ + +Q + V +N++ F ++ DL Q Sbjct: 524 LAEQSHLIIPMGAHIFEQATTDCQQWQNHKALAGVKVAVNISSIQFSEQNIL-DLTQLTL 582 Query: 379 SAHPIQ--QLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 + L LEITE L DV +A +L + N+++A+DDFGTG SS S+L+ L Sbjct: 583 EKTGLSPSLLELEITESAMLGDVSKVVAVLNDLKKLNIEIALDDFGTGYSSLSYLKLLPI 642 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID+ F + S+ + + +I L L++ ++AEG+E +EQ ++L R G H +Q Sbjct: 643 DRLKIDREFVKDLLSNTDDQAILSMICKLATELSLNVLAEGIEEKEQLEFLGRAGCHEVQ 702 Query: 495 GYLYAQPMPLRDF 507 G+ +A+PMPL DF Sbjct: 703 GFYFAKPMPLDDF 715 >UniRef50_C8QGW8 Diguanylate cyclase/phosphodiesterase withMHYT sensor n=1 Tax=Pantoea sp. At-9b RepID=C8QGW8_9ENTR Length = 699 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 93/246 (37%), Positives = 140/246 (56%), Gaps = 9/246 (3%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 ++++ + ++ L E LF QP A +G E LLRW +PR+G + PD+F+P AE Sbjct: 429 HQLALANDLWHALEHQEMRLFYQPKFRAGGTLLMGFEALLRWQHPRRGLLMPDMFLPRAE 488 Query: 325 EHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH- 381 + I+ L +V+ E RQ + +S + V +N++ F + LI L + H Sbjct: 489 KTGQIIALGNWVINEACRQLRQWHEEGNSHWSVSVNLSALQFHQRDLIDSLREI-LQRHS 547 Query: 382 -PIQQLILEITERDALLDVDY---RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L+LEITE A+ D + RIA ELH+ VK+AID+FG G ++ L+ L L Sbjct: 548 LPEGALMLEITETIAMRDPQFSQQRIA-ELHQLGVKVAIDNFGIGYANLLHLKHLEATEL 606 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF ++ +D+ ++TV +I L Q LN+ +VAEGVET+EQ + L G LQGYL Sbjct: 607 KIDRSFINSLRADSEDATVVSAMITLAQSLNLRMVAEGVETEEQQRLLTGLGFDTLQGYL 666 Query: 498 YAQPMP 503 +P P Sbjct: 667 LGKPTP 672 >UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCU3_9GAMM Length = 723 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/267 (34%), Positives = 143/267 (53%), Gaps = 15/267 (5%) Query: 257 YIAWLATAYRMSFSREINLGLA--QHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 + + + R + EI+L A Q EF+++ QP + ++ IG EIL+RW P ++ Sbjct: 448 FTDEMQESVREALQLEIDLRRAYRQQEFDIYLQPKICMATESVIGAEILIRWPRPDGSFL 507 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETI------RQRHVFPMSSQFHVGINVAPSHFRRGV 368 PDVFIP AEE LI + +V ET +Q++ P+ F IN++ G Sbjct: 508 PPDVFIPKAEEMGLIHDIGEWVFRETCDTIRSWQQQNRIPLD--FTFAINISMRQLHTGH 565 Query: 369 LIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARE----LHRKNVKLAIDDFGTGNS 424 L +D+ I LE+ ++++ D R+ + LH++ +K++IDDFGTG S Sbjct: 566 LAEDIAAI-VKEVGIDPNCLEVEVTESIMMQDPRVTIDALNALHQQKIKISIDDFGTGYS 624 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 S S L L D +KIDKSF A+ SD + + II+LG L++ ++AEG+ET+ + Sbjct: 625 SLSHLRQLPIDAIKIDKSFVQALESDGQADAIVNTIISLGHNLDMRVIAEGIETEANRQA 684 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPKWL 511 L G + QGY YA+PM DF +L Sbjct: 685 LTAAGCDVAQGYFYAKPMCREDFLDYL 711 >UniRef50_B4SIM9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=20 Tax=Xanthomonadaceae RepID=B4SIM9_STRM5 Length = 919 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/264 (35%), Positives = 139/264 (52%), Gaps = 9/264 (3%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R+ ++ + + EF L QPLL+A + +E LLRW+ P G+ SP FIPIAE+ Sbjct: 649 RLELEHALHGAIEREEFSLAYQPLLHAHHGEPPAIEALLRWHRPGIGYCSPAEFIPIAEK 708 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFR-RGVLIKDLNQYWFSAHP 382 IV + +V+ E RQ + + + +NV+ R RG + + P Sbjct: 709 CGEIVRIGDWVLNEACRQAIAWDRAGLCFDRIAVNVSAVQLRDRGFAERVIEICHAHGWP 768 Query: 383 IQQLILEITERDALLDVDYRIARE----LHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 Q+L LE+TE + D D I R L R V LA+DDFGTG S+ ++L LK Sbjct: 769 PQRLELELTESALIRDTD--ILRHCFDVLERHGVPLAVDDFGTGFSNLNYLNRFPVGRLK 826 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + D+ + VT I+ LG L +++VAEGVET ++ LRR G +QGYLY Sbjct: 827 IDRSFVQGMLHDSGTAEVTQAIVHLGHALGMKVVAEGVETHQEEDMLRRQGCDEIQGYLY 886 Query: 499 AQPMPLRDFPKWLAGSQPPPARHN 522 ++P+ RD +WL P R + Sbjct: 887 SRPLSPRDLAQWLRQQHAAPGRTD 910 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/238 (37%), Positives = 135/238 (56%), Gaps = 7/238 (2%) Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 +I GL + EF LF QP ++A +GVE L+RW +P+QG +SP FIP+AEE LIVP Sbjct: 717 DIRKGLERGEFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVP 776 Query: 332 LTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYWFSAH-PIQQLIL 388 + +V+ RQ + S V +NV+ + + + +L L Sbjct: 777 IGEWVLTAACRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLEL 836 Query: 389 EITERDALLDVDYRIARELHR---KNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTA 445 E+TE L+D + + + L R V +IDDFGTG SS S+++ LKID+SF Sbjct: 837 ELTE-SILMDPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVH 895 Query: 446 AIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 + DA ++ +T II++ + LN+E+VAEGVET+EQ +L+R LQGYL++ P+P Sbjct: 896 GLPQDADDAGITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLP 953 >UniRef50_A9HDK0 Conserved protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HDK0_GLUDA Length = 673 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/242 (37%), Positives = 133/242 (54%), Gaps = 6/242 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 RM R++ LAQ EF LF QP LN + + +GVE L+RW +P +G I P FIP+AE Sbjct: 422 RMDLERDLQRALAQDEFVLFYQPFLNIGTHRIVGVEALIRWMHPVRGLIPPGDFIPVAEG 481 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQ 384 L+ + + + RQ +P V +NV+ + FR L++ + Q S Sbjct: 482 MGLMYDIGVWTLNTACRQASAWP--EDIVVSVNVSAAQFRHDGLVETVAQALLGSGLDAG 539 Query: 385 QLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 +L LEITE + DV R+ R+L VK+A+DDFGTG SS S+L++L +KID+S Sbjct: 540 RLELEITETAMIDDVPRAARVLRQLREMGVKIALDDFGTGYSSLSFLQSLPFTRIKIDRS 599 Query: 443 FTAAIGSDAVN-STVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 F +G + + + I +L LN+ AEGVETQEQ YL++ +QG+ +P Sbjct: 600 FVRELGQGVGDGAAIVGAITSLCGSLNVVATAEGVETQEQFDYLKQINCSEIQGFFICRP 659 Query: 502 MP 503 P Sbjct: 660 RP 661 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/267 (35%), Positives = 142/267 (53%), Gaps = 21/267 (7%) Query: 260 WLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVF 319 WL T E+ L + Q + EL QP + + Q +G+E L+RWN+P +G I P F Sbjct: 451 WLET--------ELRLAIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEF 502 Query: 320 IPIAEEHHLIVPLTRYVMAETIRQR---HVFPMSSQFHVGINVAPSHFRR----GVLIKD 372 IP AEE LI+PL +V+ RQ H +S + +N++ F R ++ K Sbjct: 503 IPQAEETSLIIPLGEWVLNTACRQIAAWHAMGISP-IRMAVNISAVQFYRIDLAQMVAKL 561 Query: 373 LNQYWFSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLE 430 L+ Y P L LEITE + DV+ +L ++L+IDDFGTG SS S+L+ Sbjct: 562 LDHYGL---PATLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLK 618 Query: 431 TLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGV 490 LKID+SF + + ++ + II+L + IE++AEGVET EQ +L+RH Sbjct: 619 RFPISTLKIDRSFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHAC 678 Query: 491 HILQGYLYAQPMPLRDFPKWLAGSQPP 517 QGYL+ +P+P +D + L + P Sbjct: 679 QYGQGYLFNRPLPAKDIERQLKTAHLP 705 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobac... 712 0.0 UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2... 548 e-154 UniRef50_D0Z7I3 EAL domain protein n=1 Tax=Edwardsiella tarda EI... 483 e-135 UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=R... 468 e-130 UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0... 461 e-128 UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria R... 459 e-127 UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobac... 458 e-127 UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI 454 e-126 UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erw... 451 e-125 UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio ... 447 e-124 UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6... 443 e-123 UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae Re... 443 e-123 UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=... 442 e-122 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 441 e-122 UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 T... 441 e-122 UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila ... 438 e-121 UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomon... 435 e-120 UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya da... 434 e-120 UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya Re... 433 e-120 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 433 e-120 UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9X... 432 e-119 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 430 e-119 UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteo... 429 e-118 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 428 e-118 UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domai... 427 e-118 UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA 426 e-118 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 425 e-117 UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromob... 420 e-116 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 419 e-116 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 419 e-115 UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2V... 418 e-115 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 417 e-115 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 417 e-115 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 414 e-114 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 414 e-114 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-114 UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae Rep... 412 e-113 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 412 e-113 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 412 e-113 UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholde... 412 e-113 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 411 e-113 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 411 e-113 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 411 e-113 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 410 e-113 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 409 e-112 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 408 e-112 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 408 e-112 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 408 e-112 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 408 e-112 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter ro... 407 e-112 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 407 e-112 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 407 e-112 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 407 e-112 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-112 UniRef50_Q1LCJ1 EAL-containing signal transduction protein n=3 T... 406 e-112 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-111 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-111 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 405 e-111 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 405 e-111 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 405 e-111 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 405 e-111 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 405 e-111 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 405 e-111 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 405 e-111 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 405 e-111 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 404 e-111 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 403 e-111 UniRef50_C1DB08 Predicted signal transduction protein containing... 403 e-111 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 403 e-111 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 403 e-111 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 403 e-110 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 403 e-110 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 402 e-110 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 402 e-110 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 402 e-110 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 402 e-110 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 401 e-110 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 401 e-110 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 401 e-110 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 400 e-110 UniRef50_B8GNC0 Signal transduction protein containing a membran... 400 e-110 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domai... 399 e-109 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 399 e-109 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 399 e-109 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 399 e-109 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 399 e-109 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 398 e-109 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 398 e-109 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 398 e-109 UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='N... 398 e-109 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 398 e-109 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 397 e-109 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 397 e-109 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 397 e-109 UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU 397 e-109 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 397 e-109 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 397 e-109 UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domai... 397 e-109 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 397 e-109 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 397 e-109 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-109 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 396 e-109 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-108 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 396 e-108 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-108 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-108 UniRef50_A8VZA5 Signal transduction protein containing a membran... 395 e-108 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 395 e-108 UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=c... 395 e-108 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 395 e-108 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 394 e-108 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 394 e-108 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 394 e-108 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 394 e-108 UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobact... 394 e-108 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 393 e-108 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 393 e-108 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 393 e-108 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 393 e-107 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 393 e-107 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 393 e-107 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 393 e-107 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_A5VAG1 EAL domain protein n=2 Tax=Alphaproteobacteria R... 392 e-107 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 392 e-107 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 392 e-107 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 392 e-107 UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 392 e-107 UniRef50_A0YP68 Hybrid signal transduction histidine kinase and ... 392 e-107 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xan... 391 e-107 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 391 e-107 UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 391 e-107 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 391 e-107 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 390 e-107 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 390 e-107 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 390 e-107 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 390 e-107 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 390 e-107 UniRef50_B2JUW5 Diguanylate phosphodiesterase n=1 Tax=Burkholder... 389 e-106 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 389 e-106 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synecho... 389 e-106 UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT... 389 e-106 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 389 e-106 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 389 e-106 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 389 e-106 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-106 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-106 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 388 e-106 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 388 e-106 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 T... 387 e-106 UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae Re... 387 e-106 Sequences not found previously or not previously below threshold: UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 424 e-117 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 417 e-115 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 413 e-113 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 411 e-113 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 409 e-112 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 408 e-112 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 407 e-112 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-111 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 406 e-111 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 404 e-111 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 403 e-111 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 401 e-110 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 401 e-110 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 400 e-110 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 398 e-109 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 397 e-109 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 397 e-109 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 397 e-109 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 397 e-109 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 397 e-109 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 396 e-108 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 396 e-108 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 396 e-108 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-108 UniRef50_A8FYM5 Signal transduction protein containing a membran... 395 e-108 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 395 e-108 UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n... 395 e-108 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 395 e-108 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 395 e-108 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 394 e-108 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 394 e-108 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 394 e-108 UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/P... 394 e-108 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 394 e-108 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 393 e-108 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 393 e-108 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 393 e-108 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 393 e-108 UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/P... 393 e-107 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 393 e-107 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 392 e-107 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 392 e-107 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 391 e-107 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 391 e-107 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 391 e-107 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 390 e-107 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 390 e-107 UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 389 e-106 UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria R... 389 e-106 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 389 e-106 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-106 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 388 e-106 UniRef50_B7KEZ6 Response regulator receiver modulated diguanylat... 388 e-106 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-106 UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 387 e-106 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 387 e-106 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 387 e-106 >UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobacteriaceae RepID=YOAD_ECOLI Length = 532 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 532/532 (100%), Positives = 532/532 (100%) Query: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV Sbjct: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 Query: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV Sbjct: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 Query: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ 180 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ Sbjct: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ 180 Query: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY 240 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY Sbjct: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY 240 Query: 241 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV Sbjct: 241 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 Query: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA 360 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA Sbjct: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA 360 Query: 361 PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG 420 PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG Sbjct: 361 PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG 420 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE Sbjct: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 Query: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR 532 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR Sbjct: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR 532 >UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2_SERP5 Length = 538 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 223/516 (43%), Positives = 312/516 (60%), Gaps = 1/516 (0%) Query: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 M Q + YR R ++ L L +L R+ + +Q A V +++ + Sbjct: 1 MLMTQLAVSKYRYYRWLLAGAVGLAILLLSLYTRYYQEIGTIEQNRQVLATRTVAKINDL 60 Query: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 L P + +E +PL+G C LR +AA+ Q +R++ LV+DG +YCSS+FG R Sbjct: 61 LTPAKQQAERSMPLLGSTCEEVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLF 120 Query: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNA-GVMEMINIDLLTAMLLEP 179 IL + L L ++ KG P LI WTPA +N+ GV+ + NI+LL LLEP Sbjct: 121 STILPSVANDGAKLVLRPSLSVAKGVPTLIMWTPAQPDNNSNGVLHVFNIELLANFLLEP 180 Query: 180 QLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWH 239 Q P L V L YG + + Y S R+PF+I++ GP A+ LA Sbjct: 181 QEPYAQRVVLNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALA 240 Query: 240 YLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIG 299 LP +PL++L+SLL Y+ +L TA RMS S I +++ EF ++CQP++NA + +C+G Sbjct: 241 ALPRHIPLSLLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVG 300 Query: 300 VEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINV 359 VE+LLRW N RQGWISPDVFIP+AE+H LI+ LTRY+M+ + +FP F++ INV Sbjct: 301 VEMLLRWKNKRQGWISPDVFIPLAEQHGLIIALTRYLMSTVVENLQLFPPRPSFYISINV 360 Query: 360 APSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDF 419 A HF +I D+ + W AHP+ L+LE+TER AL ++ Y + L + LAIDDF Sbjct: 361 AAEHFNGVTIIDDIRRLWLPAHPMPSLMLELTERTALSEIQYEQIKTLKEMGIMLAIDDF 420 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GTG+SS S+L+ L PDVLKID+ FTAAIG+DA+N+TVTD II L RL ++LVAEGVET Sbjct: 421 GTGHSSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETA 480 Query: 480 EQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQ 515 EQA YLR V+ LQG+ +A+PMP+ FP WL + Sbjct: 481 EQADYLRSRDVNALQGFYFAKPMPINVFPLWLQQYE 516 >UniRef50_D0Z7I3 EAL domain protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z7I3_EDWTE Length = 588 Score = 483 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 200/530 (37%), Positives = 303/530 (57%), Gaps = 7/530 (1%) Query: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 M + +K YR R ++ + +L+ R+ + QQ A A+ +L+++ Sbjct: 48 MLFSHITMKRYRLYRALLAITIGALVCIISLASRYQQELTTVQQMQRNAATIAITQLERI 107 Query: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 L + S+ + + C L A L+T+R++ LV+DG + CS++ + Sbjct: 108 LSRAETVSKNNIGWVNQRCEEISPHLTNMAIHLETIRAVLLVKDGIVTCSNLINQPIKSL 167 Query: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ 180 I E+ + + L L R L +GSP+L+ W P + +G++ + NI L+A +L P+ Sbjct: 168 RAIYPEMLSAKDTLVLRAARLLNRGSPILLFWRPDQANPTSGMVYIFNIATLSAFILAPR 227 Query: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPED---NENYQVSSQRFPFTINVNGPGATALA 237 P + +L V L + + V + + ++ S R+PF+I++ P A LA Sbjct: 228 PPYVDYMALNVAGHTLRFNDMRVRAPTDAAEAETPPRLELRSSRYPFSISLFSPAARDLA 287 Query: 238 WHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC 297 LP +PLA+LL LL + +LA+A RMS + I + + + L+CQP+++ S +C Sbjct: 288 LQRLPRHIPLALLLFLLASILTYLASANRMSLAYPIAQAIRRRQLTLYCQPIIHTESGRC 347 Query: 298 IGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGI 357 GVEILLRW NPR GW SP++FIP+AE++ LIVPLTRY++ QRH FP F+ I Sbjct: 348 EGVEILLRWYNPRHGWTSPEIFIPLAEQNGLIVPLTRYLLEALAAQRHHFPHDRDFYFSI 407 Query: 358 NVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAID 417 NVA HF +G L D+ W P Q+L+LE+TER L DY L + LA+D Sbjct: 408 NVAAEHFAQGKLALDIQNLWLRHRPQQRLMLELTERTRLPSQDYPQLHILREMGLSLALD 467 Query: 418 DFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVE 477 DFGTG+SS S+L+ L+P++LKID++F A IGSDA+N+ V D++I L ++L + LV EGVE Sbjct: 468 DFGTGHSSLSYLQDLQPEMLKIDRAFCATIGSDAINARVLDLMIDLARQLRLRLVMEGVE 527 Query: 478 TQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITP 527 +QA YLR+ V+ +QGYL+A+PMPLRDFP W A Q R G TP Sbjct: 528 QTQQADYLRQRQVYAMQGYLFARPMPLRDFPGWHAHYQ----RQCGDSTP 573 >UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=RTN_ECOLI Length = 518 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 143/513 (27%), Positives = 252/513 (49%), Gaps = 10/513 (1%) Query: 11 YRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV 70 + R ++ C + ++ ++F+ + ++ + + LD L++ ++ Sbjct: 8 FGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR 67 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 L PL C A+ L +AA VR+ LV+D +CSS G ++P+ +++ L Sbjct: 68 LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDIN 127 Query: 131 QPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASL 189 + + + + ++ P ++ W N+GV +N++L ++ + +L Sbjct: 128 KNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVAL 187 Query: 190 TVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAV 249 + L + + ++ + D + P T+ + T W+ + L Sbjct: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT---WNDVWYAFLLGG 244 Query: 250 LLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNP 309 + +VG + + + RM REI + + +F + QP+++ ++ + G+E+LLRW +P Sbjct: 245 MSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 Query: 310 RQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRG 367 G I PD FI AE +IVPLT+++ R + GIN+AP H Sbjct: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 Query: 368 VLIKDLNQYWFSAHPIQ--QLILEITERDALLDVDYR-IARELHRKNVKLAIDDFGTGNS 424 D+ Q ++ P Q++LEITERD L + + + LH V++AIDDFGTG+S Sbjct: 365 SFKADI-QKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHS 423 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 + +LE D LKID+ F AIG++ + S V D ++ L +RLN+ VAEGVET EQA++ Sbjct: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 L GV+ +QGY ++P+PL DF +WL P Sbjct: 484 LSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 >UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0KNV8_AERHH Length = 510 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 164/487 (33%), Positives = 255/487 (52%), Gaps = 19/487 (3%) Query: 36 ISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQT 95 +Q + HA E L++ L + ++ +G PC LR Q A + Sbjct: 35 WQTFAGMKQDAEERLLHAREMLERTLDHAHQAAAMVQGSVGRPCEEVVQGLRDQVATVPD 94 Query: 96 VRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPA 155 VR++ L + +YCSS++G P LA+ Q L L + G P+++ P Sbjct: 95 VRTVNLAKGEVVYCSSLYGPYQGPFK--LADYANGQ--LDLMRGNPVTPGRPLVVYRQPV 150 Query: 156 AGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENY 215 S V+ I+ L +L L + S +L + + +L + D +P P + Sbjct: 151 GEYS---VLVGIDGYYLHNIL--DMLSRNSPLTLVIGAQSMLADGQIHDEVP-PVALGSL 204 Query: 216 QVSSQRFPFTIN--VNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREI 273 + +S ++PF + ++ + W+Y L + LL LL G + + S S+E+ Sbjct: 205 EQTSGKYPFRVVTDLSHDEYGSHIWNYSRASLIIYPLLGLLAGCLVYWLAGRSTSPSQEL 264 Query: 274 NLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLT 333 L Q EF + QP++ G E+L+RW +PRQG ISPD FIP+AE+ LIVP+T Sbjct: 265 RRALDQREFIPYLQPVVTGDDAHWSGCEVLMRWQHPRQGLISPDRFIPLAEDSGLIVPMT 324 Query: 334 RYVMAETIRQ--RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW--FSAHPIQQLILE 389 R +M + Q V + FH G N++ SH + L++D + F +PI+ L+LE Sbjct: 325 RLLMEQVREQFAGRVHSLPRGFHFGFNISASHCKDMSLLEDCRDFINAFRENPIK-LVLE 383 Query: 390 ITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 +TER+ + + R+ ELH+ V +AIDDFGTG+SS ++L+ + D LKID+SF I Sbjct: 384 LTERELIVADETTDRLFAELHQLGVFIAIDDFGTGHSSLTYLQQFQVDFLKIDQSFVGMI 443 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 GSDA++S + + +I L RL + LVAEGVE + QA YLR V+ LQGYLY +PMP+++F Sbjct: 444 GSDALSSHIVENVIDLATRLGLLLVAEGVENEVQAAYLRARQVNFLQGYLYGRPMPMKEF 503 Query: 508 PKWLAGS 514 LA Sbjct: 504 AGLLAQG 510 >UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria RepID=A4SI84_AERS4 Length = 527 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 155/506 (30%), Positives = 250/506 (49%), Gaps = 23/506 (4%) Query: 14 NRMIVCTICALVTLASTLSVRFISQRNLNQQ---RVVQFANHAVEELDKVLLPLQAGSEV 70 R + +V + L + + ++ ++ A+ A+ ++ +L + + Sbjct: 10 RRWLRLCCALMVFILPLLVGGWATHKSYMEELESGSAAAAHKAMTLMENMLDHAERANRQ 69 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 +LPL+G PC + LR+Q A + VRS+ LV++G LYC+S+FG V ++ P Sbjct: 70 VLPLVGAPCDEINFQLREQVALVPFVRSVNLVKEGMLYCTSLFGS----VREVDDASPYI 125 Query: 131 QPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLT 190 L L + P+LI + ++ + I+ + L+ ML + + Sbjct: 126 ARKLLLMRGNQVRANHPLLIVRSEQGRNA---ALSAIDGEYLSVMLTLSH--HAGNLFMR 180 Query: 191 VDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQ----LP 246 V +D P +++S +PF+I + T WH L L Sbjct: 181 VGSTWFDEAGHYLDKAPDLHALARTELTSPHYPFSI--HAGYVTLAYWHSLWDHKSLILS 238 Query: 247 LAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 L LSL + W S E+ L EFE + QPL+ + +GVE+L+RW Sbjct: 239 LLCGLSLAFALLVWWLLGRPGSPVGELRRALRAKEFEPYLQPLVTTSDTRLMGVEVLMRW 298 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIR--QRHVFPMSSQFHVGINVAPSHF 364 +P G I PD+FIP AEE LIVP+T +M + + R + FH+ N++ +H Sbjct: 299 QHPNSGLIRPDLFIPQAEESGLIVPMTTLIMKKVAQVLSREQARLPDGFHISFNISAAHC 358 Query: 365 RRGVLIKDLNQYWFSAHPIQ-QLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGT 421 R L+++ + P + L+LE+TER+ L + R+L + VKLAIDDFGT Sbjct: 359 RDLALLQECRTFLAQFAPGKIVLVLELTERELLVVDPNTLSLFRQLDQMGVKLAIDDFGT 418 Query: 422 GNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQ 481 G+SS +L+ D LKID+SF IG+++++ + +I LG RL + L+AEGVE++ Q Sbjct: 419 GHSSLFYLQQFHVDYLKIDQSFIGRIGTESLSEHIVANVIDLGARLGLLLIAEGVESELQ 478 Query: 482 AKYLRRHGVHILQGYLYAQPMPLRDF 507 A YLR GV +QGYL+ +PMPL+ F Sbjct: 479 AAYLRAKGVDYMQGYLFGRPMPLQHF 504 >UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobacteriaceae RepID=A8GGV3_SERP5 Length = 528 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 145/509 (28%), Positives = 250/509 (49%), Gaps = 14/509 (2%) Query: 10 TYRRNRMIVCTICALV--TLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAG 67 ++RR ++ ++ ALV L +++ I+ + QR V+ L Sbjct: 12 SHRRRSLVKSSVVALVFFILFMGITLSLINHQRTQYQRAVEQRTQKFTL--DTFNNLTQI 69 Query: 68 SEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAEL 127 + L+PL PCS + + QAA VR+ LV++G YCSS G + + +I E+ Sbjct: 70 MQRLMPLTEQPCSSSQPEITYQAAFHAGVRTFMLVKNGFAYCSSATGDMMLALKNIYPEI 129 Query: 128 PAPQPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISS 186 Q L L+L L+ G P W AG + G++ ++I L+ + + Sbjct: 130 DQRQRLDLKLQQGTPLVPGKPAFAVWLRQAGKEDTGILATLDIGLMPQQMFGTSPERAPG 189 Query: 187 ASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLP 246 ++ + R L + + + Q D + ++S P I T L Sbjct: 190 IAIILGDRALTSFSPNLMPVNQLPDEKADRISIAGTPMIIMFYNQKLTPNDIR---LTLL 246 Query: 247 LAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 +++LSL++G + + R S R + G+ ++EF + QP+ + ++ G+E L+RW Sbjct: 247 GSLVLSLMIGVLCYYMLLLRQSPERALMRGIKRNEFFIEYQPVFHTKTGTIAGLEALIRW 306 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHF 364 +P +G I PD+FIP AE LIVPLTR++ + +G+N++PSH Sbjct: 307 QHPIEGRIPPDLFIPYAESEGLIVPLTRHLFRLIAEDAPRLATALPQGAKLGLNISPSHL 366 Query: 365 RRGVLIKDLNQYWFSAHPIQQ--LILEITERDALLDVDYRI-ARELHRKNVKLAIDDFGT 421 +D+ + P L+ EITER + + + LH++ +++AIDDFGT Sbjct: 367 SAPSFHQDVYELLAQ-LPGNYFTLVFEITERGMVEEGNALAEFDWLHKQGIEIAIDDFGT 425 Query: 422 GNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQ 481 G+S+ +L+ D LKID+ F +IG D V + V D +I+L ++L ++ VAEGVET EQ Sbjct: 426 GHSALIYLQRFSMDYLKIDRGFVNSIGRDTVTAPVLDAVISLAKKLKMQTVAEGVETAEQ 485 Query: 482 AKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 +L+ V+ +QGY Y++P+ + +F + Sbjct: 486 VSFLQEQDVNFMQGYYYSKPLSIDNFVAF 514 >UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI Length = 528 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 153/517 (29%), Positives = 246/517 (47%), Gaps = 29/517 (5%) Query: 22 CALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSV 81 L L L + + + + LD ++ + +E P + + C Sbjct: 19 AFLFPLVIGLLLISWQTSHDLKNDIRDNLKAGNALLDSLVQHAEIANERAAPYLRMSCDN 78 Query: 82 AHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRA 141 A L A VRSI L ++ +YC S+ G P+ + A + LL L ++ Sbjct: 79 AQPYLADLVAITPDVRSIHLSENNKIYCDSLGGKGIRPINE---SFSADEELLLLQGNKL 135 Query: 142 LIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNG 201 S ++ G+ +GV ++L+ + + SL + +R G Sbjct: 136 SPNHSALIFLRDYDEGTVFSGVSSYYLRNILSLI------KSYGNTSLHIGERWF-NERG 188 Query: 202 LVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLP----TQLPLAVLLSLLVGY 257 +V +P + +S ++P++++ W Y T L L +++S VG Sbjct: 189 VVTHRSKPT---TIEQNSLKYPYSLS--TSLTMEDYWDYFIDAKHTSLLLLLVMSFGVGG 243 Query: 258 IAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPD 317 A+ + EI + EFE + QP+++ + E+L+RW +P G I PD Sbjct: 244 YAFWRQGQINALDPEIRRAIRAQEFEPYIQPIMDIH-GRMASAEVLMRWQHPSAGLIRPD 302 Query: 318 VFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLNQ 375 +FIP+AEE LIVP+T VMA+ Q + + S FH+ N++ H L+KD Sbjct: 303 LFIPLAEESGLIVPMTSQVMAKVRDQLGPYQSKIPSDFHISFNISAKHCVNSDLVKDCQH 362 Query: 376 YWFSAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + + + L LE+TER+ + D + + +L++ V+LAIDDFGTG+SS ++L+T + Sbjct: 363 FLSAFNHPSLLSLELTERELIEDTEEARKLFAKLNQIGVRLAIDDFGTGHSSLNYLQTFQ 422 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 DVLKID+SF IGS+AV S + D ++ L QRLN++ VAEG+ET+EQ Y GV + Sbjct: 423 FDVLKIDQSFVRMIGSNAVASHIVDTLLNLAQRLNMQTVAEGIETEEQVTYFAARGVDYM 482 Query: 494 QGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMP 530 QGY YA PMP+ DF L +G P P Sbjct: 483 QGYFYASPMPMDDFLTHLVIGTW-----DGSNVPTQP 514 >UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erwinia tasmaniensis RepID=B2VJL5_ERWT9 Length = 523 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 149/515 (28%), Positives = 242/515 (46%), Gaps = 13/515 (2%) Query: 11 YRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV 70 + R ++ + L+ L L FI R ++ A + + + + ++ Sbjct: 9 HERLWLV---VAGLLPLLLCLFFTFIEARQTGARQQEMTAAALLSQAEHISDLAWDMTDS 65 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAE-LPA 129 L PC L+K A RS+GL QD T+YCSS FG PV ++ LPA Sbjct: 66 LQTFSNRPCKDIRSQLQKLGALNPYFRSVGLTQDNTVYCSSAFGATRGPVAGMIRHALPA 125 Query: 130 PQPLLR--LTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSA 187 P ++ P +I G + G +++ L ++ L Sbjct: 126 PGQSWWTLSLAGTFGVQDRPAVIFMRQTPGKT--GSYAVVDGQYLIDLMRATGLKLGYHI 183 Query: 188 SLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALA--WHYLPTQL 245 ++ + + ++ + S +P I+++ P L L T + Sbjct: 184 TMRFGGGYQIANAAPLNPQQANWKTRTFNSGSSHYPIAISISAPRTETLQNWRQVLLTFM 243 Query: 246 PLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLR 305 P+AV+LS+L + R S+ E+ G+A EF + QP+ N + Q GVE L+R Sbjct: 244 PMAVILSVLFVAVTNSWLRRRSSYRDELRRGMAFGEFSVHYQPVCNLVNGQLAGVEALMR 303 Query: 306 WNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFR 365 W W+ PD+FI AE +IV LTR+++ + + + + FH+GINVA H + Sbjct: 304 WQRSDGSWVRPDIFIAAAEAEGMIVQLTRHLLQLIAKDCASWKVPAGFHIGINVAADHLQ 363 Query: 366 RGVLIKDLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTG 422 +KD+ + + AH + + LE+TER + + D EL + +++AIDDFGTG Sbjct: 364 HEDFVKDIRGFSQNIAHLLPTITLELTERSLISEGDLVAHRLAELRSEGIRVAIDDFGTG 423 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 + S ++L+T D LKIDKSF AI S + + D II L RL +++VAEG+ET Q Sbjct: 424 HCSLTYLQTFPLDYLKIDKSFVNAIESADGETPILDTIIQLAHRLALQVVAEGIETPLQM 483 Query: 483 KYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 +YL+ HGV +QG+ YA+P+ W+ + PP Sbjct: 484 EYLKNHGVVFIQGFYYARPLSSAALMVWIEQNPPP 518 >UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VEI6_VIBAL Length = 511 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 146/507 (28%), Positives = 257/507 (50%), Gaps = 19/507 (3%) Query: 13 RNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV-- 70 R R + T+ +++ L + + + + Q++ + A+ V ++D + + +E Sbjct: 6 RVRPLFVTLASIILSLIVLQLSYKTFLSSLQEQALDRADSIVHKIDSIFFYAEEANERTL 65 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 L L G C A LRK AA + VR+ + DG + C+S++G + D L Sbjct: 66 SLALRGNNCDEASYELRKIAASIPYVRTTNISVDGYINCTSLWGDKIFEDDDERYVLD-- 123 Query: 131 QPLLRLTIDRALIKGSPVLIQWTPAAGSSN-AGVMEMINIDLLTAMLLEPQLPQISSASL 189 L L + + P+++ T + +G+ + L + L+ L S + Sbjct: 124 --KLLLMPGSQVAQNHPLIVLRTNKDNMAALSGIDALHLRQTLFSSTLDSHLAYFSLGKI 181 Query: 190 TVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGAT--ALAWHYLPTQLPL 247 +D+ L L E + S FP++I+V ++ WH + L Sbjct: 182 WLDQNGALLNRDPTKQLVGVESS-----KSDFFPYSISVGFSYSSLQEAFWHEKKFYILL 236 Query: 248 AVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWN 307 +L+ L W T S E+ + + EF + Q ++NA++++ GVEIL+RW Sbjct: 237 ILLIQLSFLVYYWWHTTRPQSLDEELKRAIKKKEFVPYAQAVVNAKTREIEGVEILMRWL 296 Query: 308 NPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFR 365 +P QG + PD+FIP AEE LIVP+T ++ ET +Q + ++ FHVG+N++P H R Sbjct: 297 HPIQGVVRPDLFIPQAEESGLIVPMTELLLKETAKQLCDYSSHLTKPFHVGVNISPQHCR 356 Query: 366 RGVLIKDLNQYWFSAHPIQ-QLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTG 422 L + ++ + + L+LE+TER+ L + + +L + K+AIDDFGTG Sbjct: 357 GMGLANECKEFIQTVNQENIMLVLELTEREVLDFSESTEVLFSDLKKLGCKIAIDDFGTG 416 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 +SS + L+ + + +KID+ F +GS+ + + + I L RL++E+VAEGVET+EQ Sbjct: 417 HSSLANLQKFQVNYIKIDQMFVQGVGSNPTSRHLVESTIELANRLSLEIVAEGVETEEQQ 476 Query: 483 KYLRRHGVHILQGYLYAQPMPLRDFPK 509 +YL + V LQG+L+++P+PL +F + Sbjct: 477 EYLANYHVKYLQGFLFSKPIPLEEFLQ 503 >UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6AJG8_VIBHA Length = 501 Score = 443 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 155/514 (30%), Positives = 255/514 (49%), Gaps = 30/514 (5%) Query: 13 RNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEEL-DKVLLPLQAGSEVL 71 R + I+ L+ L S SV N R V+ + + L DK++ S+ Sbjct: 6 RTKRILLAFIVLILLISIGSVGVYQLSKSNLHREVRSSLEVGKSLMDKLVKNADVASQRA 65 Query: 72 LPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQ 131 LP + C A LR + V+ I L +D ++C S+ G R+ I+ Sbjct: 66 LPYTKMECEQALPYLRDLVVTIPDVQMIALAKDNHVFCGSLVGKRDY----IVPNYHFSG 121 Query: 132 PLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTV 191 L L +P LI + N GV ++ L +L S +L Sbjct: 122 DKLFLVSSLPDKPNTPALIF---KNETGNTGVGVSVSGYYLKNIL---------SLTLKD 169 Query: 192 DKRHLLYGNGLVDSLPQPEDNE---NYQVSSQRFPFTINVN---GPGATALAWHYLPTQL 245 +L G ++ Q D QV S+ +P+ + V+ L H T + Sbjct: 170 LDTYLQVGEKWINKAGQISDQPLPVTIQVESKDYPYRLQVSLFHDDYMNYLLSHKRST-I 228 Query: 246 PLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLR 305 + +L +L + ++ ++AT S ++ LA +EF + QP ++ ++ + +G E+L+R Sbjct: 229 FIIILFALSMSWLIFVATGQTPSMEDKLRQALANNEFVPYVQPYVD-KTNKFVGFEVLVR 287 Query: 306 WNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSH 363 W +P++G I PD+FIP+AE+ LI+P+T+ +M + + + F V N++ H Sbjct: 288 WLSPKEGLIRPDLFIPLAEDSGLIIPMTKSLMLQVSNELAACSQSLPPDFSVAFNISAKH 347 Query: 364 FRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDYR--IARELHRKNVKLAIDDFG 420 L++D ++ S + QL LE+TER+ + D D + L +V LAIDDFG Sbjct: 348 CVNSELLEDSLEFLSSFPEKKVQLCLELTERELVRDTDEARALFHSLSEHDVSLAIDDFG 407 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 TG+SS S+L R D+LKID+SF IG+D+V++ + + ++ L RL ++ +AEGVET E Sbjct: 408 TGHSSLSYLRQFRFDILKIDQSFVQMIGNDSVSAHIVENLLDLASRLGMKTIAEGVETAE 467 Query: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 QA+YLR H + LQGY +A+PMPL+DF + L + Sbjct: 468 QAEYLRSHNIDCLQGYYFAKPMPLKDFIQQLEQN 501 >UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae RepID=C8QG51_9ENTR Length = 534 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 144/522 (27%), Positives = 235/522 (45%), Gaps = 17/522 (3%) Query: 12 RRNR---MIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGS 68 RRNR ++ L+ L + I R+ Q+ + AN + + +++ Sbjct: 5 RRNRDFGWLLIVCAGLLPLVLGILCTAIEARHTVHQQQINTANSLLAQAERMSDSAWDMI 64 Query: 69 EVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELP 128 L PCS L+++ RSIG ++ + CSS +G + +++ P Sbjct: 65 TDLRQFHYQPCSAIEGKLQREGNLNAYFRSIGKLEGDNVTCSSAYGMYPGTLSEMILRQP 124 Query: 129 APQPLLRLTIDRALIKGSP-----VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQ 183 +I G P + ++ P G +I+ L + + Sbjct: 125 PVTGKAWWSISLRGTYGVPDRPAVIFVRQLPDGE----GFWAVIDGQYLMDFMRALGESR 180 Query: 184 ISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATAL-AWHY-L 241 ++ + + + +E S R+P ++ V P + L AW L Sbjct: 181 NYHMTMRFNDGAPITSGPVEVQPEIWLKSEPLLAQSSRYPISVEVVVPPSELLKAWRQAL 240 Query: 242 PTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 LP+A + S+L+ + R+S+ EI + +F + QP+ + Q C GVE Sbjct: 241 FIFLPMAAIFSILLMILTANWLRRRISWRDEIRRAMRNRQFSVHYQPVYSVAEQHCNGVE 300 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAP 361 LLRW+ P I PD+FI AEE +IVPLTR+++ + ++ FH+G+N+A Sbjct: 301 ALLRWHLPNGDTIRPDIFISAAEEEGMIVPLTRHLLELMAEDIQSWQVAPGFHIGLNLAA 360 Query: 362 SHFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDY--RIARELHRKNVKLAIDD 418 H + +KD+ + + Q+ LE+TER + D + R R L + +++AIDD Sbjct: 361 EHLQHPDFVKDIELFARRVQDKKLQITLELTERSLIHDGEDVARKLRLLQSQGMRVAIDD 420 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG+ S S+L T D LKID+ F AI + V D II L ++L +E++ EGVET Sbjct: 421 FGTGHCSLSYLLTFPLDYLKIDRGFINAIERLDGETPVLDAIINLARKLQLEVLGEGVET 480 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPAR 520 Q +YL++ GV +QGY YA PM WL P R Sbjct: 481 SLQFQYLQQRGVLFIQGYYYAWPMDNDRLRTWLNEQGQQPLR 522 >UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=C6DJC0_PECCP Length = 535 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 146/513 (28%), Positives = 247/513 (48%), Gaps = 13/513 (2%) Query: 8 IKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAG 67 + ++ N ++ + ++ L L F+ R + ++ + A A+ + + Sbjct: 5 LNKHKIN-LLQLLVAGILPLLLGLLFTFVESRLMVKRDLESTAQIAMNHAENISAQAWKM 63 Query: 68 SEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAEL 127 + L G PC++ L++ + R+IG++ + +YCSS FG P+ ++ + Sbjct: 64 VDRLQRFHGQPCNIIGDELQRLGSVFSYFRAIGVIHNTNVYCSSTFGSTLTPISRVIQQP 123 Query: 128 PAPQPLLRLTIDRA----LIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQ 183 R ++ A + + ++ P G G M++ L +++ + Sbjct: 124 LPETYSERWSLSIAGSDNVKERPALIFVQMPLTGD---GAYAMVDAQYLIDLMIAISKIR 180 Query: 184 ISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALA-WHY-L 241 +L +D H + + ++ S RFP T+N+ P + +A W Sbjct: 181 GYQLTLKMDNGHPIQTGPAITPRIGLFSTSALEIRSSRFPITLNITAPASQEIANWKQAF 240 Query: 242 PTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 T LPLA++LSLL W ++ F EI G+A EF ++ QP+ +A SQ C GVE Sbjct: 241 FTFLPLAIILSLLFTTAIWYWQKRKLLFRDEIRKGIANGEFSVYYQPIYDAESQTCTGVE 300 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAP 361 LLRW WI PD+FI AE +I+P+TR++ + + FH+G+NVA Sbjct: 301 TLLRWRRSNGKWIRPDIFISAAEAESMIIPITRHLFDLVASDIASWQVKPGFHLGLNVAA 360 Query: 362 SHFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDYRI--ARELHRKNVKLAIDD 418 H + D++++ + LE+TER+ + + I +L + IDD Sbjct: 361 EHLHHPSFVSDVHRFAEKVASHSLSISLELTERNLISNGPEIIQRLHQLREDGFMITIDD 420 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG+ S S+L+ D LKID+ F +AI S + + D II L R+N++ VAEGVET Sbjct: 421 FGTGHCSLSYLQNFPLDCLKIDQGFVSAISSPDEEAPILDAIINLSHRINLQSVAEGVET 480 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 ++Q YL++HGV +QG+LYA+PM F WL Sbjct: 481 KQQLMYLQQHGVKYIQGFLYAKPMDNESFLVWL 513 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 92/269 (34%), Positives = 143/269 (53%), Gaps = 5/269 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ ++ + + EF L QP L+ R+ + +GVE L+RW +P G I P FI + Sbjct: 688 ALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGL 747 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LIVP+ +V+ E RQ V+ + +N++ F + L++ + Sbjct: 748 AEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEET 807 Query: 381 -HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P Q L +E+TE + DVD+ I REL V+L+IDDFGTG SS S+L+ DVL Sbjct: 808 QLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVL 867 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I +D ++ + II+L L + ++AEGVET+EQ YL++H +QGY Sbjct: 868 KIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYF 927 Query: 498 YAQPMPLRDFPKWLAGSQPPPARHNGHIT 526 +++P+ L + G + Sbjct: 928 FSRPITADAMEVMLKDDKRLQTVSIGSLI 956 >UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 Tax=Edwardsiella RepID=C5BG29_EDWI9 Length = 514 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 155/516 (30%), Positives = 260/516 (50%), Gaps = 37/516 (7%) Query: 16 MIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLI 75 ++ +V L +T+++ + + R L + Q A+ ++D+ L Q + + Sbjct: 16 LLSAGAVGMVLLLATVTISWQASRGLA-ESAKQRLTLAIGQIDEALDNAQTAVDAVRRYA 74 Query: 76 GLPCSVA-HLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLL 134 G PC H L QA + VRS+ L Q +YCSS++G + V D L Sbjct: 75 GQPCDTTLHNMLAFQATTVPDVRSVSLAQASVIYCSSLYGAFHAEVGDDHYT----NKRL 130 Query: 135 RLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKR 194 L + +++ P G +A V+ I+ L +L P + L + Sbjct: 131 TLMSGNRITPHRSLVVFREPGPG--DASVLVGIDGYYLRNILRSLSTP--TPLYLRIGAG 186 Query: 195 HLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLL 254 + +VD+LP P D + S R+P ++ P + W Y+ +++L L+ Sbjct: 187 WMDPQGQVVDALP-PVDGRRFVRHSSRYPISVTTAVPIDS--HWTYMLDYSRGSLVLFLV 243 Query: 255 VGYIAWLATAYRM-----SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNP 309 + ++ + T YR+ S + L Q +F + QP+++ + G EIL+RW +P Sbjct: 244 LAFVFGVGT-YRLVGQVNSPVFYLREALRQRQFIPYIQPVVDGADESLSGCEILMRWQHP 302 Query: 310 RQGWISPDVFIPIAEEHHLIVPLTRYVMAET-------IRQRHVFPMSSQFHVGINVAPS 362 + G I P+ FIP+AE+ LIV +TR +M + R + + FH G N++ S Sbjct: 303 QMGLIPPNNFIPLAEDSGLIVAMTRDIMRQVSDYFAPRCR-----SLPTHFHFGFNISAS 357 Query: 363 HFRRGVLIKDLNQYW--FSAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDD 418 HF L+++ ++ F A+PI +L+LE+TER + D + I +L V LA+DD Sbjct: 358 HFNDLSLVEECRRFIDAFEANPI-RLVLELTERQRVPDGELTEQIFHKLRGLGVLLALDD 416 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG+SS ++L+ D++KID+SF IGSD ++ + D +IAL +RL++ +AEGVE+ Sbjct: 417 FGTGHSSLAYLQRYHFDIIKIDRSFVRMIGSDMLSGHIVDTVIALAKRLDMITLAEGVES 476 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFPK-WLAG 513 EQ ++LR + + LQGYL+ P PL DF + WL Sbjct: 477 GEQLQHLRGYRLDYLQGYLFGCPQPLPDFTREWLKS 512 >UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KH05_AERHH Length = 513 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 153/511 (29%), Positives = 259/511 (50%), Gaps = 18/511 (3%) Query: 15 RMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPL 74 R++ +C + +L + ++ +Q+ A A+ ++D L ++ LPL Sbjct: 13 RLLASLLCCATLILISLVTLYWQTWSMTRQQAQTAAERAMTQIDSALHHSTLAAKAALPL 72 Query: 75 IGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLL 134 PC LR A VRS+ L ++G LYCSSIF D+ L Q L Sbjct: 73 ASRPCREVARELRVLVATSPYVRSVNLSRNGRLYCSSIFDEI-----DLKDRLQNSQHEL 127 Query: 135 RLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKR 194 + P L+ + + G + V+ IN L+ L + L S + + ++ Sbjct: 128 LRLEAVTQLGRKPSLLFYHLSEG--DHAVVVAINPYHLSKPL-QWHLAGPHS-WVQIGEQ 183 Query: 195 HLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALA--WHYLPTQLPLAVLLS 252 L + D P NY++ S F +++N P + LA + + L + L Sbjct: 184 WLDLQGKVHDGQPPRLRGFNYRLDSATFGYSLNQGFPLSAVLAMTLQKQGSMVLLILALG 243 Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 L G + ++ + ++E+ + + EF + QP++ +++ Q G E+L+RW + RQG Sbjct: 244 GLAGLATYRWWSHISTPTQELRRAIIKQEFVPYLQPIVVSQNGQLHGCEVLMRWQHHRQG 303 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQR--HVFPMSSQFHVGINVAPSHFRRGVLI 370 I PD+FIP+AEE LI+ +T+ +M + Q H + +FH N+ H ++ L+ Sbjct: 304 LIRPDLFIPLAEESGLIILMTQTLMQQVRLQFAPHAAALPPRFHFSFNICARHCQQLSLL 363 Query: 371 KDLNQYW--FSAHPIQQLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSF 426 D + F+A+PI L+LE+TER+ + + R+ EL + V++ +DDFGTG+SS Sbjct: 364 DDCRSFLAAFTANPI-TLVLELTERELITPNHLTERLFEELRQMGVRIGLDDFGTGHSSL 422 Query: 427 SWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 ++L+ D LKID+SF A IG++A++ + D I+L RL ++ +AEGVETQEQA +L Sbjct: 423 TYLQQFHVDYLKIDQSFVAMIGTNALSRHILDSTISLATRLGLQTIAEGVETQEQADFLV 482 Query: 487 RHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 V LQGYLY +P+ + F + L+ + P Sbjct: 483 ERQVDYLQGYLYGRPLTPQQFLQQLSPTPAP 513 >UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomonas RepID=A5W2V7_PSEP1 Length = 528 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 149/505 (29%), Positives = 234/505 (46%), Gaps = 16/505 (3%) Query: 15 RMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPL 74 R ++ + L+ + L+V Q A+E ++ +L L + LLPL Sbjct: 14 RTLLPWVVGLLPVMCGLAVMNWQVEREMQASSHATTRQALEHVEHILDNLSRAANSLLPL 73 Query: 75 IGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLL 134 C A L LR Q + VRS L + LYC+S+FG + PV L Sbjct: 74 TDSSCEQAQLMLRAQVTRNAFVRSTNLFRHNNLYCTSLFGEFDEPVN----PGDYVDGKL 129 Query: 135 RLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKR 194 L ++ G P+L+ A + G + ++ D L L + + V Sbjct: 130 WLMDGNSVTPGHPLLVYR---ASDGDHGAITTVDGDHLLTALRLIGPDE--ELQIRVGDA 184 Query: 195 HLLYGNGLVDSLPQPEDNENYQVSSQRFPFTIN--VNGPGATALAWHYLPTQLPLAVLLS 252 + + + + N + S R+PF++ + L + P L L ++L Sbjct: 185 WMGKDGVVHKGVSPAAPSANVLIGSTRYPFSVQGGYSADKQGQLLRSHYPGLLSLLLVLG 244 Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 L S E++ L EF + QP++ + G E+L+RW++PR+G Sbjct: 245 ALAALACRWQIRRATSPRAELDRALQADEFLPYFQPVVRKGDYRWAGAEVLMRWHHPREG 304 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLI 370 + PD+FIP AE IV +TR ++ T + + + FH+G+N+ H R L+ Sbjct: 305 LVRPDLFIPYAEHSGQIVAMTRALLTHTAQSLAPYAGLLEDGFHIGVNITADHCRDLSLL 364 Query: 371 KDLNQYWFSAHPIQQ-LILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFS 427 D + P + L LE+TER + V + +LH V +A+DDFGTG SS + Sbjct: 365 DDCRTFLQHFPPGRVVLTLELTERKLIEPTPVTLELFEKLHAMGVMIALDDFGTGQSSLN 424 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L + D LKID+SF A IG+DA++ + + II L +L++ +VAEGVET Q YL + Sbjct: 425 YLRQFKVDYLKIDQSFVAMIGADALSVHILESIIELSGKLDLGIVAEGVETDLQRDYLAK 484 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLA 512 HGV QGYL+A+PMP F LA Sbjct: 485 HGVDFQQGYLFARPMPAAQFLAALA 509 >UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3R8_DICDC Length = 500 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 146/508 (28%), Positives = 253/508 (49%), Gaps = 25/508 (4%) Query: 21 ICALVTLASTLSVRFISQRNLNQQRVVQFAN----HAVEELDKVLLPLQAGSEVLLPLIG 76 + A++T + L++ + N Q +Q AN AV +++ + Q + L+ Sbjct: 4 LIAILTFLAMLAIGCGAIYYHNYQSDIQDANVSAVKAVNDIETIFNDAQRVVNLGKTLLT 63 Query: 77 LPCSVAHLP-LRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLR 135 +PC + L AA +R+I LV++ +YCSS+FG N P L Q L Sbjct: 64 VPCDTVVIRKLNMLAAIENYLRTISLVRNDIVYCSSLFGVDNRPAA--LERFYKGQ--LA 119 Query: 136 LTIDRALIKGSP-VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKR 194 L ++ P V+ T GS AG+ + ++L ++ + L L V Sbjct: 120 LLPGNSVTPNKPLVMYMETTENGSVAAGIHGIHLFNILNSLSKQRDLY------LRVGAT 173 Query: 195 HLLYGNGLVDSLPQPEDNENYQVSSQRFPFTI--NVNGPGATALAWHYLPTQLPLAVLLS 252 L +G+V + +V S+ + F+I V+ W L + L++ Sbjct: 174 WL-SRDGMVAPFDERTLPNYVEVPSRHYYFSILYTVDDNYTLVDFWDQEKMTLLIVFLIA 232 Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 L G +A+ T+ S + + E F QP+++ +S++ G E+L RW +P+ G Sbjct: 233 LGSGMLAYKYTSRITSPVEALKRAIRNQEIVPFYQPVISTQSRELYGFEVLARWYHPKTG 292 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLI 370 +ISPDVFIP++E+ LI+PLTR +M I + H+GIN++ H + I Sbjct: 293 FISPDVFIPLSEQSGLIIPLTRLLMERVINDLISCQDILPEDLHIGINISAKHCQYEGFI 352 Query: 371 KDLNQYWFSAHPIQ-QLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSFS 427 D + + + +L++EITER+ + R + L + +A+DDFGTG S+F Sbjct: 353 DDCKYFIDALGTRKIRLMVEITEREKIEITPTTLRFFQNLKAAGILIALDDFGTGYSNFD 412 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L L+ D++KID+SF + I ++ ++ + + +I L Q +N++ +AEGVET+ QA++L Sbjct: 413 YLRQLQADLIKIDQSFISMIDENSQSTPLVNCVIDLAQNMNLKTIAEGVETEFQAEFLSE 472 Query: 488 HGVHILQGYLYAQPMPLRDFPK-WLAGS 514 + LQGYL+++P+P + K WL S Sbjct: 473 KNIDYLQGYLFSRPLPFDECVKTWLQKS 500 >UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya RepID=C6CFE9_DICZE Length = 501 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 137/508 (26%), Positives = 250/508 (49%), Gaps = 22/508 (4%) Query: 17 IVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIG 76 ++ + + A L + ++Q A AV+ ++++L + E PL+ Sbjct: 4 LIALLTFVAMFAMGLWAIYYQDYRADRQGAYANAERAVKNIEEILDEAKNAVEDSKPLLA 63 Query: 77 LPCSV-AHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLR 135 L C+ L AA +R++ L++ +YCSS++G N P + L Sbjct: 64 LSCTPEVIRQLNMTAAVASHLRTVSLIKRDVVYCSSLYGVDNRPAALERFHM----RELA 119 Query: 136 LTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRH 195 L ++ LI + + GV I+ LT++L L + + L V Sbjct: 120 LLAGNSVTPDR-TLIMYLGNTAYGSVGV--AIHGQHLTSVL--DLLSKRRNLYLLVGNTW 174 Query: 196 LLYGNGLVDSLPQPEDNENYQV-SSQRFPFTI--NVNGPGATALAWHYLPTQLPLAVLLS 252 + N + S P D N+ + S + F+I ++N + A W+ + L++ Sbjct: 175 ISRENQV--STFNPTDLPNFVIIPSGHYHFSILYSLNEKYSLADFWYKEKMTFLIVFLIA 232 Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 L G++A+ + S I + E + QP+++ S++ GVE+L RW++P+ G Sbjct: 233 LGSGFLAYKYSTRINSPYDGIRRAIENQEVLPYYQPVISTVSREIYGVEVLARWHHPKSG 292 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQR--HVFPMSSQFHVGINVAPSHFRRGVLI 370 +ISPD+FIP+ E+ LI+P+TR +M+ +R H+ + H+ IN++ H + I Sbjct: 293 FISPDIFIPLCEQSGLIIPMTRSLMSSVVRDLTPHLNTLPDNLHIAINISAQHCQSDDFI 352 Query: 371 KDLNQYWFSAHPIQ-QLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 D + + L++EITER+ + I ++L V +A+DDFGTG S+F Sbjct: 353 TDCQNFIAAFGDKNVHLMIEITEREKVDITPETIGFFKKLSDAGVLIALDDFGTGYSNFD 412 Query: 428 WLETLRPDVLKIDKSFTAAIG-SDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 +L L +V+KID+SF + I +D +ST+ + +I L Q++ + +AEGVET+ Q ++L Sbjct: 413 YLRKLHVNVIKIDQSFVSMIDENDPQSSTLVNCVIDLAQQMKLMTIAEGVETEFQTEFLS 472 Query: 487 RHGVHILQGYLYAQPMPLRDFPK-WLAG 513 R ++ +QGY +++P+P + + WL Sbjct: 473 RKHINFMQGYFFSRPLPFDELAQTWLNK 500 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 89/255 (34%), Positives = 140/255 (54%), Gaps = 6/255 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T RM + L + ++ QPL+++ + Q +G+E LLRW++P G ISP FIP+ Sbjct: 616 TLERMMLENNLRNALQHDQLIIYYQPLVDS-TNQIVGMEALLRWHHPELGLISPSQFIPL 674 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LIVP+ ++V+ +Q + +F+V +N++ FR L++ + Q + Sbjct: 675 AEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEAT 734 Query: 381 -HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L LE+TE + + I + L K + +IDDFGTG SS S+L+ D L Sbjct: 735 DLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTL 794 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF ++ + + IIA+ + L ++ VAEGVE +EQ +L HG H++QGY Sbjct: 795 KIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYY 854 Query: 498 YAQPMPLRDFPKWLA 512 + +PMP F L Sbjct: 855 FGRPMPAEKFEDMLQ 869 >UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9XWJ5_CROTZ Length = 520 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 152/504 (30%), Positives = 248/504 (49%), Gaps = 13/504 (2%) Query: 14 NRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQF---ANHAVEELDKVLLPLQAGSEV 70 ++I+ I LA TL + ++ L+QQR Q+ A L+ L+A ++ Sbjct: 15 RKIILVGIA--TGLALTLMITLAARGWLHQQRENQYDMLARDIHHYLNTYFAQLKASADA 72 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 L PL C L +AA VR+ L++DG YCSS G ++P+ D++ ++ Sbjct: 73 LQPLTLAECGAVSAELTSRAAFNVNVRAFLLIRDGVAYCSSATGKLHLPLRDLVPDIDTR 132 Query: 131 QPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASL 189 + + + + ++ P ++ W G++ +N++L ++ + ++ +L Sbjct: 133 KTVDISIIPGTPMMPDKPSIVMWFGNPLMEGRGIVTTLNVNLTPYLIYTARQNDLNGLAL 192 Query: 190 TVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAV 249 R L +G V + + S Q +P + + G A H L Sbjct: 193 VAKDRALTTFSGKVMTPDELPAEPLRSESVQGYPLKLYLYGDTMPAEDRHLALLLGLLIG 252 Query: 250 LLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNP 309 +L + I A R REI + +++F + QP+++A ++Q GVE L+RW +P Sbjct: 253 VLGGALTVILL---ALRARSGREILSAIKRNQFFVVYQPVVDAATRQIRGVEALMRWEHP 309 Query: 310 RQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRG 367 G I PD FI AE LIVPLT ++ + + +GIN+AP H Sbjct: 310 SAGMIPPDAFISFAEAQGLIVPLTHHLFKLIAQDVPRLQQSLPPGAKLGINIAPGHLHSE 369 Query: 368 VLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDY-RIARELHRKNVKLAIDDFGTGNSS 425 D+ + S P QL+ EITERD + + + + LH + ++A+DDFGTG+S+ Sbjct: 370 QFKADIQKLHASLPPDYFQLVFEITERDMIREEEAMDLFTWLHEQGHEIAVDDFGTGHSA 429 Query: 426 FSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYL 485 +LE D LKID+ F AIG++ + S V D +I+L +RLN+ VAEGVETQEQAK+L Sbjct: 430 LIYLERFTLDYLKIDRGFVNAIGTETITSPVLDAVISLAKRLNMVTVAEGVETQEQAKWL 489 Query: 486 RRHGVHILQGYLYAQPMPLRDFPK 509 GV+ LQGY +++P+ D P Sbjct: 490 TVRGVNFLQGYYFSRPVRAADLPA 513 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 88/258 (34%), Positives = 147/258 (56%), Gaps = 6/258 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T R + L + EF ++ QP + + + +GVE L+RW +P++G ISP FIP+ Sbjct: 685 TLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPM 744 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LI+P+ +++ Q + V +N++ F + L + ++ + Sbjct: 745 AEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDT 804 Query: 380 AHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L LEITE A+ DV + EL + + LAIDDFGTG SS ++L+ L D+L Sbjct: 805 GLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDIL 864 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +++ + + II LG L +++VAEGVET+EQ +LR+ ++QGYL Sbjct: 865 KIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYL 924 Query: 498 YAQPMPLRDFPK-WLAGS 514 + +P+P+R+ + +L+ + Sbjct: 925 FTKPLPVRELEQKYLSNN 942 >UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteobacteria RepID=A6V3S1_PSEA7 Length = 526 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 147/512 (28%), Positives = 240/512 (46%), Gaps = 13/512 (2%) Query: 8 IKTYRRNRMIVCTICALVTLASTL---SVRFISQRNLNQQRVVQFANHAVEELDKVLLPL 64 I RR R+ I L + F R + + +LD +L + Sbjct: 3 IGKQRRERLFHFGIVFAALAIVPLLMAPLVFQQARMRADGEAAVTSVAVLRQLDTLLGVV 62 Query: 65 QAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGY-RNVPVVDI 123 + +G PC+ L + RS+ LV+ G +YCSS+ G +++P+ Sbjct: 63 SGSLDRSQGALGKPCAEVLGRLTRMTMLSPYFRSLVLVERGNVYCSSLQGELKDLPLPVA 122 Query: 124 LAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQ 183 L + P R+T A + ++ +GV+ +I+ LL+ Q Sbjct: 123 FKALGSLAPGQRITPSNATPQVPERASVIMSRGDANGSGVLAIIDGQY----LLDIQQAA 178 Query: 184 ISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPT 243 V L +P +D +S RFP + V A A A+ Sbjct: 179 SYDGRFQVQMVLRESQRQLPGGMPATQDGGGAIAASARFPVEVRVAVAPALASAYRADAW 238 Query: 244 --QLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 P VL ++L GY+A L R+S ++ + EF + QP++ + +C GVE Sbjct: 239 RHYTPFIVLAAMLAGYLAHLFCRRRLSLVGDMYRAMRAREFHMVYQPIIRLDTGECRGVE 298 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAP 361 L+RW P + PD+F+P+AE++ +I LTR++ + + H+G+NV+ Sbjct: 299 ALVRWRRPDNSQVRPDIFVPLAEDNGMIGDLTRHIFGLVAADLAQLGLGAGDHLGVNVSG 358 Query: 362 SHFRRGVLIKDLNQYWFS-AHPIQQLILEITERDAL-LDVD-YRIARELHRKNVKLAIDD 418 SH + D+ + + QL+LE+TER+AL D R R+L V+ A+DD Sbjct: 359 SHLAGQGFVDDVRRLLGAIGSDGPQLVLEVTEREALPRDAQAQRNIRQLRELGVQWALDD 418 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG SS S+L+ L D LK+D+SF + +G+++VN+ V + II L QRL++++ AEG+ET Sbjct: 419 FGTGQSSLSYLQQLHADFLKVDRSFVSGVGTESVNAVVLETIIGLAQRLDLDVTAEGIET 478 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 +EQ +YL H V QGYL++ P+ + W Sbjct: 479 REQEQYLCGHSVQWGQGYLFSPPLTAAELGAW 510 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 143/259 (55%), Gaps = 5/259 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + + Q +F L+ QP + +S + +G E LLRW +P+ G ISP+ FIP+ Sbjct: 529 AKTRIELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPL 588 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQY-WFS 379 AEE +I+ + +V+ E Q + + V +N++P FR ++ + + + Sbjct: 589 AEETGVIIEIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTT 648 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L LEITE + D+D I ++L K + LAIDDFGTG SS S+L+ L Sbjct: 649 GIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRL 708 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I +D ++++T +IAL +N+++VAEG+ETQEQ +L+ G + QGYL Sbjct: 709 KIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYL 768 Query: 498 YAQPMPLRDFPKWLAGSQP 516 Y+ P+ F + P Sbjct: 769 YSPPVAKEPFDHFFTDGSP 787 >UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=39 Tax=Enterobacteriaceae RepID=B4T8H8_SALHS Length = 516 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 139/505 (27%), Positives = 230/505 (45%), Gaps = 13/505 (2%) Query: 24 LVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAH 83 V L + V ++ ++ + AN + + + L C+ Sbjct: 5 AVPLIVMILVGLLAGIFQLKRDIAVSANTLLRFSADISAASWQVARKAARLAESSCTDTL 64 Query: 84 LPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILA-ELPAPQPLLRLTIDRAL 142 L + A VR IG +++G + CS + G + LPA P L ++ Sbjct: 65 KELSRTRAFTPYVRDIGFLENGDITCSFVTGTERYHFSRLAGLSLPASYPERWLRSIGSM 124 Query: 143 IKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGL 202 +G L+ ++N +++ + ++ + S+ SLT + Sbjct: 125 AEGPDRLVVVYVKKVAANKAAFVIVDSQYVQELMEILAAERASAFSLTFGAGEAITSAAT 184 Query: 203 VDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY--LPTQLPLAVLLSLLVGYIAW 260 + + +S + V P +T A+ L +PL++ LS+ + Sbjct: 185 LRGKAFLTQ----RFTSTDHTIQLMVRTPFSTLSAYWLQNLFIFIPLSLCLSVGMMLFYR 240 Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 R+S +REI G+ +EF + QP+ N C GVE L+RW P +I+PD+FI Sbjct: 241 RWYLKRLSLAREIARGITHNEFTVHYQPVFNVEDGSCGGVEALMRWPQPDGRFITPDIFI 300 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AE +I+PL+R++ + +S F++ +N++P+H I+D+ + + Sbjct: 301 TAAENEGMIIPLSRHLFELIAHDVINWTVSDDFYISVNISPAHLMDDGFIQDI-EALRTR 359 Query: 381 HPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L+LE+TER +++ + L K V +AIDDFGTG S S+L+ L D LK Sbjct: 360 LGTITLMLELTERSLIVEPSQVAEKLSTLREKGVLIAIDDFGTGYCSLSYLQQLPVDSLK 419 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID++F I + + + V D II L QRL + +VAEGV TQ Q +Y+ HGV +QG+LY Sbjct: 420 IDRTFIDTIDTSSDDVPVLDTIITLSQRLGLNVVAEGVSTQHQLRYILSHGVGFVQGFLY 479 Query: 499 AQPMPLRDFPKWLAGSQPPPARHNG 523 A+PM DF WL S R NG Sbjct: 480 ARPMGANDFMSWLGKS---AQRQNG 501 >UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA Length = 506 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 142/496 (28%), Positives = 243/496 (48%), Gaps = 19/496 (3%) Query: 21 ICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLP-- 78 + + + L+ + S + A+ V+E+D++L + + L L+ P Sbjct: 14 LLSFLPSLFALAFLYFSFGQSLDELSQLKASSVVQEVDEILEYGEEANNQSLMLLEKPDS 73 Query: 79 CSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTI 138 C + LR A + VRS L +D +YC+SI+G + LRL Sbjct: 74 CEAHSVALRHLVATVPYVRSANLAKDNVIYCTSIWGDSHYQ----YDLADYSSGRLRLMH 129 Query: 139 DRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLY 198 + P+++ + + + ++ L LLEP + L V ++ L Sbjct: 130 GSKVDAKHPLIVVRSESGEDTAFSGID----SLYLRQLLEPHDK--LHSYLAVGEQWLDS 183 Query: 199 GNGLVDSLPQPEDNENYQVSSQRFPFTIN--VNGPGATALAWHYLPTQLPLAVLLSLLVG 256 + ++ P ++VSS FP+++ + P + W + +++ L Sbjct: 184 KDLVLKVNPADRLVAWHKVSSANFPYSVYSGFDYPSMISAFWERDNQYIIAILIIQTLFA 243 Query: 257 YIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISP 316 + + EI + EF + QP+LN+ +++ G+EILLRW +P QG + P Sbjct: 244 LYLLWLSRRPSNLYLEIERAMENKEFVPYAQPILNSANREIQGIEILLRWQHPVQGTVRP 303 Query: 317 DVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLN 374 D+FIP AE LI+P+T +M T ++ ++ + FHVG+N++P H +G L+ Sbjct: 304 DLFIPKAERSGLILPITHQLMINTAKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVSACQ 363 Query: 375 QYWFSAHPIQ-QLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLET 431 ++ L+LE+TER+AL D+ I ++ K+AIDDFGTG+SS L Sbjct: 364 EFIDIVDSKDVTLVLELTEREALNYCDLTDEIFTQIKSMGCKIAIDDFGTGHSSLVNLRK 423 Query: 432 LRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVH 491 + D LKID++F IG D + + +I L L++++VAEGVET+ QA+YL+ GV Sbjct: 424 VDLDYLKIDQTFVRDIGVDTITGHLLQNMITLSHDLSLDVVAEGVETEFQAEYLKERGVS 483 Query: 492 ILQGYLYAQPMPLRDF 507 LQG+L+A+PMPL++F Sbjct: 484 YLQGFLFAKPMPLKEF 499 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 82/257 (31%), Positives = 144/257 (56%), Gaps = 5/257 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R+ + + + EF LF QP ++ ++ + +G E LLRW +P G + P FIP+AE Sbjct: 597 QRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAE 656 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AH 381 + LIV + +V+ RQ + + +N++ F+R +++ +++ S Sbjct: 657 DSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGL 716 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L LEITE A+ D+ + I +L +K +++++DDFGTG SS ++L L D LKI Sbjct: 717 APELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKI 776 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 DKSF I +++ + +I+L +L++ +VAEGVET+EQ +L++ QGYL++ Sbjct: 777 DKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFS 836 Query: 500 QPMPLRDFPKWLAGSQP 516 +P+P + K L + Sbjct: 837 KPLPAEEIEKMLRDKKC 853 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 138/256 (53%), Gaps = 5/256 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R+S ++ + EF L QP ++ R+ + GVE L+RWN+P G +SP FIP+AE Sbjct: 632 ERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAE 691 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 E LIVP+ +V+ Q + + + +N++ FR+ LI + + + Sbjct: 692 ETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGL 751 Query: 382 PIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 Q L LE+TE + + + I REL + +++AIDDFGTG SS S+L+ LKI Sbjct: 752 APQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKI 811 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D++F + D ++T+ II + L ++ +AEGVE EQ +L RH +QGY ++ Sbjct: 812 DQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFS 871 Query: 500 QPMPLRDFPKWLAGSQ 515 +P+ + + LA + Sbjct: 872 RPITAEELGRLLADGK 887 >UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1U8_CHRVO Length = 513 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 169/518 (32%), Positives = 252/518 (48%), Gaps = 29/518 (5%) Query: 9 KTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGS 68 + +R + ++ + A + A+T +R V Q + +E +D +L + Sbjct: 8 RRHRLSHLLFALLVAALPFAATAPALLWQERQDLSASVRQQLDQGLELVDGILDQADEAA 67 Query: 69 EVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRN--VPVVDILAE 126 VLLPL G PC A PLR+Q A VRS L+ T+YCSS+ G + +P D + Sbjct: 68 RVLLPLAGGPCDKAVYPLRRQVAVAPFVRSAVLLDGDTVYCSSLSGSTSWAMPARDFV-- 125 Query: 127 LPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISS 186 Q ++L A+ P+L G + + ++ L L + Sbjct: 126 ----QGRMQLLSGNAVTPNVPLLYYRLHRGGDA---AVTAVDGRYLQLALQDASD--TIP 176 Query: 187 ASLTVDKRHL---LYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNG---PGATALAWHY 240 L V + L G G +L Q + S R+PFT+ N P L H+ Sbjct: 177 VFLQVGEHWLGPRRNGAGQAPALGQVAELRR----SSRYPFTVRANYDLPPWHRQLWSHH 232 Query: 241 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 P + L +L L + WL SF+ E+ LA EFE + QP++ G Sbjct: 233 APLTVILLLLGLLAGATLYWLLGRP-ASFTGELRRALANDEFEGYLQPIVKPGLPDWRGA 291 Query: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA 360 E+L+RW +PR+G I PD+FIP AEE LIV +TR +M I + + FH+G+N++ Sbjct: 292 EVLMRWRHPREGLIRPDLFIPRAEESGLIVEMTRRMMDAVIAKVGRLSLPQDFHLGVNIS 351 Query: 361 PSHFRRGVLIKDLNQ-YWFSAHPIQQLILEITERDALL---DVDYRIARELHRKNVKLAI 416 +H + G L D + A L LE+TER+ + +V+ + R L VK+A+ Sbjct: 352 RAHLQEGSLYGDCRRWAGLLAESGAVLTLELTEREMVEITPEVE-ALFRSLDALGVKIAL 410 Query: 417 DDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGV 476 DDFGTG+SS +L+ L D LKID+ F A IGSD ++ + D + L +L +E VAEGV Sbjct: 411 DDFGTGHSSLVYLQQLTVDGLKIDQGFVAGIGSDGLSGHIVDSVAELAAKLGLETVAEGV 470 Query: 477 ETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 ET EQ YL R GV LQG+ A+PMPL +F + + Sbjct: 471 ETAEQFDYLSRLGVGWLQGFYIARPMPLDEFVRRVRQG 508 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 419 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 143/262 (54%), Gaps = 8/262 (3%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R+ + L E EL QP ++ R + IG E L+RW +P+ G +SP FIP+AE Sbjct: 826 ERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAE 885 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA-H 381 E LIVP+ +V+ RQ + + Q V +NV+ F+ L L + + Sbjct: 886 ETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRL 945 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P QL +E+TE + + + I REL V++++DDFGTG S ++L+ D +KI Sbjct: 946 PPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKI 1005 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+ F + + A ++ + +I++L LN ++AEGVE + Q +LRRHG +QG+L++ Sbjct: 1006 DRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFS 1065 Query: 500 QPMPLRDFPKWLAGS---QPPP 518 +P+P +F + LA Q PP Sbjct: 1066 RPLPAAEFARLLAAGTRLQRPP 1087 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 85/257 (33%), Positives = 135/257 (52%), Gaps = 5/257 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + R++ E+ + + EF L QP +NA S +G+E L+RW +P +G I P FI Sbjct: 268 SAINRLNMESEMRKAIERGEFVLHYQPQINATSGHVVGMEALIRWQHPERGMIPPYHFIS 327 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-F 378 +AEE +IVP+ +VM E RQ + + + V +N++ F L+ + Sbjct: 328 VAEETGMIVPIGEWVMYEACRQNKAWHDAGLAELKVAVNLSARQFSDRKLLDKVRHALKQ 387 Query: 379 SAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S L LEITE + D++ IA E+ + LAIDDFGTG SS ++L+ D Sbjct: 388 SGLNPAFLELEITESVIMKDIEATIALLEEIASMGLSLAIDDFGTGYSSLNYLKRFPIDK 447 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKIDKSF + S + + + II L L + ++ EGVE EQ +L+ + +QGY Sbjct: 448 LKIDKSFIDDVISSEDDGKIVEAIIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGY 507 Query: 497 LYAQPMPLRDFPKWLAG 513 +++P+P +F ++ Sbjct: 508 YFSKPLPADEFEAFVRS 524 >UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2VIJ7_ERWT9 Length = 539 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 146/525 (27%), Positives = 245/525 (46%), Gaps = 14/525 (2%) Query: 13 RNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLL 72 R + I L L + + + + Q + +V+ L+ L Sbjct: 16 RVVFLSAGISFLSFLL-FIVISVAVTCHQRAEAHNQLIGQTRSYVIRVMDELKQILLPLQ 74 Query: 73 PLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQP 132 C L +QAA +R I LV + +CSS G N + I + Sbjct: 75 AETFDHCDRVRDDLAEQAASTPNIRYILLVNNNAAFCSSASGPMNNEIHQISPFTNDNKA 134 Query: 133 L-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTV 191 + +RL +++G P ++ W + GV+ +N+++ +LL Q + + ++ Sbjct: 135 VDIRLVSGAPMLRGKPAMVLWLRNPTTPGNGVLATLNLNMTPYLLLASQQRENTGMAIVT 194 Query: 192 DKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLL 251 + N V + N +++ +P + G H + + +L+ Sbjct: 195 GDTAITTWNEQVINTDALPPNPLRRIAIPGYPMMLYFYGEILPERDLHII---IMAGLLV 251 Query: 252 SLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQ 311 ++LV I ++ R+ +EI G+ + EF + QP++ S G+E L+RW +P + Sbjct: 252 AVLVASICYVLFRLRLRPGKEIMQGIRRGEFHVEYQPIIATGSDTAYGLEALMRWVHPTE 311 Query: 312 GWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVL 369 G + D FI AE +LIVPLTR++ A R H +GIN++PSH Sbjct: 312 GRVPADAFISYAEGQNLIVPLTRHLFALIARDAHQLCKVVPVGTKLGINLSPSHLTNPDF 371 Query: 370 IKDLNQYWFSAHPIQQLI--LEITERDALLDVD-YRIARELHRKNVKLAIDDFGTGNSSF 426 KD+ Q W + P+ EITER + + + + +H++N+K+AIDDFGTG+S+ Sbjct: 372 RKDVRQ-WLAMMPVDHFEYVFEITERTMVSESNADEMFDWIHQQNIKIAIDDFGTGHSAL 430 Query: 427 SWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 +LE D LKID+ F +IG V S V D ++ L + L ++ VAEGVET QA++L Sbjct: 431 LYLEKFHFDYLKIDRGFVQSIGMKTVTSPVLDTVLTLARELKLKTVAEGVETNAQAQWLI 490 Query: 487 RHGVHILQGYLYAQPMPLRDFPKWLAGSQPPP---ARHNGHITPI 528 GV LQGY Y++P+ ++ K+ +GSQP A +G I P+ Sbjct: 491 NRGVTHLQGYFYSRPLGVQQLAKYFSGSQPASEDCADISGSIAPV 535 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 82/255 (32%), Positives = 138/255 (54%), Gaps = 5/255 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ + + L + EF + QP ++ S + G+E L+RW +P G+ISP FIP+AEE Sbjct: 702 RLTMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEE 761 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHP 382 LIV + +V+ Q + V +N++P FR+ L +++ + Sbjct: 762 TGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLA 821 Query: 383 IQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 + + LE+ E + DVD +A L V+L +DDFGTG SS S+L+ D++KID Sbjct: 822 PRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKID 881 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF I D ++ + +I+L LN+ +VAEG+ET+ Q YLR +QG+ +++ Sbjct: 882 QSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSR 941 Query: 501 PMPLRDFPKWLAGSQ 515 P+P +F + L + Sbjct: 942 PVPAAEFEQMLRDQR 956 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 5/258 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R+S ++ L + EF L QP +N Q +E L+RW +P G + P FIP+AE Sbjct: 368 ERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLAE 427 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 E LIVPL +V+ +Q + + V +N++P R+G L + + + + Sbjct: 428 ETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVLAETGL 487 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 L++E+TE + D + I R L R V+++IDDFGTG SS +L+ LKI Sbjct: 488 APGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKI 547 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I S+ + + +I++ + LN+ +VAEGVET EQ + LR +QG+L++ Sbjct: 548 DRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGFLFS 607 Query: 500 QPMPLRDFPKWLAGSQPP 517 +P P F L + P Sbjct: 608 EPAPAEQFTPVLGHAATP 625 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 84/247 (34%), Positives = 137/247 (55%), Gaps = 5/247 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ + Q++ L+ QP ++ ++ GVE L+RW +P +G +SP FIP+AEE Sbjct: 501 LLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSPAHFIPLAEET 560 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 LIVP+ +V+ E +Q+ ++ + + V +N++P FR+ + + Sbjct: 561 GLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFPGKVEAILQETGLEA 620 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LEITE A+ I +L++ LAIDDFGTG SS ++L+ LKID+ Sbjct: 621 KYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDR 680 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF I DA ++ + II L + + +VAEGVET+ QA++LR G +QG+LYA+P Sbjct: 681 SFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKP 740 Query: 502 MPLRDFP 508 M + Sbjct: 741 MTAKQLE 747 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 87/257 (33%), Positives = 142/257 (55%), Gaps = 5/257 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + R+ + + +F L QP ++ S Q IG E L+RWN+ G +SP FIP Sbjct: 443 SVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIP 502 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 +AEE LI+PL +V+ RQ + + + +N++P RG +++ + + Sbjct: 503 LAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTE 562 Query: 379 SAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + Q L LEITE DV+ + +L VK+++DDFGTG SS S+L+ D Sbjct: 563 TGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDT 622 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF I +D ++ + II+LG+ LN+ ++AEG+ET++Q ++L +G QGY Sbjct: 623 LKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGY 682 Query: 497 LYAQPMPLRDFPKWLAG 513 L ++P+P ++F L Sbjct: 683 LMSKPVPNKNFVDLLTQ 699 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 88/272 (32%), Positives = 143/272 (52%), Gaps = 14/272 (5%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 L+ + + + L ++E +L+ QP ++ + Q IG E LLRW++P G ISP FI Sbjct: 687 LSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFI 746 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 PIAE I+ + +V+ IRQ + + +N++ FR+ L+ + Sbjct: 747 PIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILA 806 Query: 379 S-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 P + L LE+TE + D + I H + ++++IDDFGTG SS S+L+ + Sbjct: 807 EVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVY 866 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF I +D + + II + L ++ +AEGVET EQ +LR HG H +QG Sbjct: 867 KLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQG 926 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPARHNGHITP 527 Y +++P+P +F ++ RHN +T Sbjct: 927 YYFSKPLPSVEFEQF---------RHNHDLTS 949 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 90/267 (33%), Positives = 139/267 (52%), Gaps = 7/267 (2%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 A R + ++ + H+F+L Q ++ S+ G E L+RW +P G +SPD FIP+A Sbjct: 635 AKRTALEGDLRKAIENHQFQLHYQIQVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLA 693 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFP---MSSQFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 EE LI+P+ +V+ + + +S F + +NV+ FR+ + + Sbjct: 694 EESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQY 753 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE L +++ IA L VK ++DDFGTG SS +L+ L D L Sbjct: 754 EINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQL 813 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I DA + + IIA+ L+++++AEGVET+EQ K+L G QGYL Sbjct: 814 KIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYL 873 Query: 498 YAQPMPLRDFPKWLAGSQPPPARHNGH 524 + +P+P+ F L S PA Sbjct: 874 FGKPVPIEQFETSLRKSLFQPADSCHE 900 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 133/254 (52%), Gaps = 5/254 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ E+ + +E L QP ++ + +G+E L+RWN+P G + P FI + Sbjct: 647 ALERLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISL 706 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LI+P+ +V+ RQ + Q + +N++ F + L++ + + Sbjct: 707 AEETGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQET 766 Query: 380 AHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L +E+TE + D++ I R+L V+L++DDFGTG+SS ++L+ D L Sbjct: 767 GLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTL 826 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I + ++++ II+L L + ++AEGVET Q LR G + +QGY Sbjct: 827 KIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYY 886 Query: 498 YAQPMPLRDFPKWL 511 + +P+P L Sbjct: 887 FCKPLPSDQIETLL 900 >UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae RepID=A4TND3_YERPP Length = 490 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 130/477 (27%), Positives = 232/477 (48%), Gaps = 8/477 (1%) Query: 39 RNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRS 98 ++ ++ + + + L + L+PL C A L +AA VR+ Sbjct: 5 YRSSENKLTTQSGNIITYASHFLNEITTTMSQLIPLSTQSCEQASPTLHYRAAFTNGVRA 64 Query: 99 IGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPL-LRLTIDRALIKGSPVLIQWTPAAG 157 LV++G YCSS G + PV I ++ QPL ++ ++ P + W AG Sbjct: 65 FLLVREGVAYCSSATGEMHTPVSTIYPKVNLSQPLDFKIQQGTPMMPNKPAIAVWLRQAG 124 Query: 158 SSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQV 217 + G++ + L +L+ ++S +++ +D + + V + Q + ++ Sbjct: 125 RGDTGILATMEFSLHPYLLMGRSDNEMSGSAIIIDGLAITTFDSNVLPISQLPNLNAREI 184 Query: 218 SSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGL 277 + +P I + T L L ++ Y + S EI G+ Sbjct: 185 TLPGYPIKILIYHNSITKNDIRMTLLGGLLLAGLVGILAYYILITKK---SAEAEILRGI 241 Query: 278 AQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVM 337 + EF + QP+ + +Q G+E L+RW +P +G ISPD+FIP AE HLI PLT ++ Sbjct: 242 RRGEFFVEYQPVFRSHNQTISGLEALIRWQHPTEGRISPDIFIPYAETQHLIQPLTTHLF 301 Query: 338 AETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH-PIQQLILEITERD 394 IR + + + N++P+H +D+++ + I + EITER Sbjct: 302 ELIIRDTALMVNLFPTGAKLAFNISPAHLADDDFCQDVSRLLQQLNTDIFTPVFEITERG 361 Query: 395 ALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVN 453 + ++ + LH + +++A+DDFGTG+S+ +LE D +KID+ F + IG + V Sbjct: 362 MVQKELALKQFAWLHSQGIQIAVDDFGTGHSALIYLERFTLDYIKIDRGFISTIGENTVT 421 Query: 454 STVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 + V D ++ L ++LNIE +AEG+ET++Q YL +HGV+ LQGYL ++P+ + K+ Sbjct: 422 TPVLDSVLILAKKLNIETIAEGIETEQQLHYLAKHGVNYLQGYLLSKPLSVEALAKF 478 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 91/256 (35%), Positives = 138/256 (53%), Gaps = 6/256 (2%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 A ++ RE+ L + +F L QP ++ ++ Q IG+E L+RW++P G I P FIPIA Sbjct: 554 AKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIA 613 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 EE LIVPL +VM +Q + + Q V +N++ F + LI+ + + Sbjct: 614 EETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVNISLRQFMQNNLIEMITSILEETG 673 Query: 381 HPIQQLILEITERDALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 Q L LEITE AL D RI L V ++IDDFGTG SS S+L D LKI Sbjct: 674 LAPQYLELEITESMALNVDYTIRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKI 733 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + + N + II + + I ++AEGVET E +L+ + +QGY Y+ Sbjct: 734 DQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYS 791 Query: 500 QPMPLRDFPKWLAGSQ 515 +P+P ++ +L ++ Sbjct: 792 KPLPTKEIDSFLQVNR 807 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 94/261 (36%), Positives = 141/261 (54%), Gaps = 5/261 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A A R+ E+ + E L QP ++ +G E L+RW +P G +SP FIP Sbjct: 760 AAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIP 819 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 +AEE LI+ L + + E RQ V+ + V +N++ F++ + Sbjct: 820 LAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALAD 879 Query: 379 SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 ++ P Q L LE+TE + DV+ IA EL V+L+IDDFGTG SS ++L+ D+ Sbjct: 880 TSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVDL 939 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+ F + +D ++ + IIALG+ LN+ L+AEGVETQ Q YL GV +QGY Sbjct: 940 LKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGY 999 Query: 497 LYAQPMPLRDFPKWLAGSQPP 517 +++P+P D +LA P Sbjct: 1000 YFSRPLPAEDMATYLAQRLLP 1020 >UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholderia cepacia complex RepID=A9AQW1_BURM1 Length = 588 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 146/511 (28%), Positives = 238/511 (46%), Gaps = 21/511 (4%) Query: 15 RMIVCTI---CALVTL-ASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAG-SE 69 R+ C + C LV A L+ R+ + +V A +D++L L++ ++ Sbjct: 80 RLAFCAVVIACVLVPAGALVLAGRYARDAVARHEGLV--AGDIAASVDRILNSLRSRHAD 137 Query: 70 VLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPA 129 VL PL+G PC PL + +L+ +R+I LV L CSS G + P+ D PA Sbjct: 138 VLPPLVGRPCRQIFAPLAEAETRLRYLRAIALVNGNRLTCSSALGAIDAPL-DAYVRAPA 196 Query: 130 PQPL-----LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQI 184 P + L + +G PVL+ + A +AGV+ +I D + L Sbjct: 197 ATPAADGTRIALLSETPYQRGIPVLVAFRATA--RDAGVLYLIEGDYVADALAHSGSYGA 254 Query: 185 SSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGP--GATALAWHYLP 242 SA+L++ L G + ++S+ +PFT++V + + Y Sbjct: 255 ESATLSIAGAGRLDHRGRFIPASRAVRPRGTAIASRAWPFTVSVVASAQYVSQVERRYRL 314 Query: 243 TQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEI 302 +A+L+ LV +ATA R + + L ++EF + QP++ +++ +GVE Sbjct: 315 LFGTIALLVDALVVAAYLIATAPRRLLLKAVGDALRRNEFHVVYQPIVEIETRRTVGVEA 374 Query: 303 LLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPS 362 LLRW++P+ G ISP F+P E ++ +T YV+ + + + + INVAP Sbjct: 375 LLRWHHPKWGAISPTAFVPQVESSAVLPRVTEYVLRTAVSELTALAPAMPLRIAINVAPK 434 Query: 363 HFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFG 420 R + +++ P L+LE+TER L A L K VK AIDDFG Sbjct: 435 DLERPRFMSIVDEAIRRLPPGFTLVLEVTERVLLEKNPRTTAMFAALRAKGVKFAIDDFG 494 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 T +S+ L D +KID+ F A + D ++ + + I A+ +++VAEGVET+E Sbjct: 495 TQHSNLDMLSRFPFDYVKIDRQFVAQL--DGGSARLIEGIAAVAHHYGLKIVAEGVETEE 552 Query: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 Q + L G+ QGYLY +P L Sbjct: 553 QHRALHAVGIQYAQGYLYRRPQRAEQLMDGL 583 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 5/261 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + + E + QP ++ + + IG E LLRWN+ G +SP FIPI Sbjct: 449 AKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPI 508 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LI P+ +V+ E RQ + + + +N++ F + L K +++ + Sbjct: 509 AEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQSLDKLVSKVLLET 568 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P+ L LEITE + DV+ + +L + LAIDDFGTG SS S+L+ D L Sbjct: 569 GLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKL 628 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + ++ ++ VT II++ L + ++AEGVE Q ++LR+H +QGY Sbjct: 629 KIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYY 688 Query: 498 YAQPMPLRDFPKWLAGSQPPP 518 +++P+ D L + P Sbjct: 689 FSRPLIASDMEALLRSHKGSP 709 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 94/269 (34%), Positives = 138/269 (51%), Gaps = 5/269 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 + R+S + LA++EF L QP +N + + +GVE L+RW P++G I PD FIP+A Sbjct: 604 SERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLA 663 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 EE LI+P+ +V+ T Q + + Q + +N++ F L + + Sbjct: 664 EETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETG 723 Query: 381 HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LEITE +L+ + I EL + +AIDDFGTG SS S L+ L D+LK Sbjct: 724 LQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILK 783 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 IDKSF + I + + T+ II LG + + LVAEGVE QEQ +L +QGY + Sbjct: 784 IDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYF 843 Query: 499 AQPMPLRDFPKWLAGSQPPPARHNGHITP 527 ++P+P L P A T Sbjct: 844 SKPLPAETLQPLLKNGTYPAAAGRQQPTD 872 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 88/255 (34%), Positives = 141/255 (55%), Gaps = 6/255 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + + L ++EF+L+ QP + + + IG E LLRW +P++G I P FIP+AEE Sbjct: 984 LEMENSLRQALEKNEFQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEET 1043 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRG-VLIKDLNQYWF-SAHP 382 LIV + +V+AE RQ ++ + +N++ F +G LI+ + S Sbjct: 1044 GLIVQIGHWVLAEACRQSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLV 1103 Query: 383 IQQLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 QL LE+TE + D R R++ + V L++DDFGTG SS ++L + D LKID Sbjct: 1104 PSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKID 1163 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF I SDA ++ + + IIA+ L ++ VAEGVE +Q + G + +QGYL+++ Sbjct: 1164 RSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSR 1223 Query: 501 PMPLRDFPKWLAGSQ 515 P+P DF ++ Sbjct: 1224 PLPPEDFVALFLANK 1238 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 89/257 (34%), Positives = 143/257 (55%), Gaps = 5/257 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R+S +N L +FEL+ QP L+ +S + IG E L+RWN+P +G ISPD FIP+AE Sbjct: 675 ERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAE 734 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AH 381 E LIV + +V+ + Q + Q V +N++ ++ +++ Sbjct: 735 ESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGV 794 Query: 382 PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P L LE+TE + + + IA ++H +++++DDFGTG SS S+L+ D LKI Sbjct: 795 PEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKI 854 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I D ++ + II++ LN++++AEGVET Q + LR +G QGYL+A Sbjct: 855 DRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFA 914 Query: 500 QPMPLRDFPKWLAGSQP 516 +P+P+ + L S Sbjct: 915 KPLPVEQMTEHLLASPC 931 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 91/251 (36%), Positives = 137/251 (54%), Gaps = 5/251 (1%) Query: 280 HEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAE 339 +EF L QP ++ + Q +G+E L+RW++P G I P FIP+AEE LI PL+ +V+ E Sbjct: 790 NEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLRE 849 Query: 340 TIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDAL 396 RQ + V +N++ F++ + K + Q + Q L LE+TE + Sbjct: 850 ACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIM 909 Query: 397 LDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNS 454 + + + ELH + LAIDDFGTG SS S+L+ D LKID+SF + IG + + Sbjct: 910 RNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDE 969 Query: 455 TVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 T+T IIAL LN++++AEGVET Q +L+ +QGY +A+P+P P L Sbjct: 970 TITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQRG 1029 Query: 515 QPPPARHNGHI 525 PA + Sbjct: 1030 SQSPAMETADV 1040 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 139/258 (53%), Gaps = 4/258 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A +M+ E+N LA+ EF L QP ++A+S +GVE L+RW++P +G + PD FI Sbjct: 545 AVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFIS 604 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-F 378 +AEE LIVP+ +V+ +Q + V +N++ F + + + + Sbjct: 605 VAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQ 664 Query: 379 SAHPIQQLILEITERDALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + + L LEITE + + +EL + V +AIDDFGTG SS +L+ + L Sbjct: 665 TRLAPEYLELEITESSMIDVHRATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRL 724 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + N + II++ L + ++AEGVET+E+ +L+ H +QGYL Sbjct: 725 KIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYL 784 Query: 498 YAQPMPLRDFPKWLAGSQ 515 +++P+P D +L + Sbjct: 785 FSRPLPSEDVAFYLQAQK 802 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 5/268 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + R+ + L + EF L QP + RS G+E LLRW +P G + P+ FI Sbjct: 694 MRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFI 753 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 PIAEE LIVPL +V+AE RQ + + +NV+ FR+ L + + Sbjct: 754 PIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILM 813 Query: 379 -SAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + L LE+TE + + + I R+L + + L+IDDFGTG SS S L+ D Sbjct: 814 ETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPID 873 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + D ++T+ + IIAL + + +VAEG+E EQ +++ + +QG Sbjct: 874 RLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQG 933 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPARHNG 523 Y ++P+ +F +L + +G Sbjct: 934 YYLSRPVTAEEFGTFLKRLGESDGKAHG 961 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 94/270 (34%), Positives = 147/270 (54%), Gaps = 7/270 (2%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 +AT RM ++ L + + EF L QP L+ RS +GVE L+RW +P +G +SP FI Sbjct: 640 IATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFI 699 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 PIAEE +I + +V+ E RQ V+ + IN++ F L +++ Sbjct: 700 PIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLA 759 Query: 379 SA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + +L LE+TE ++ D I + L + L+IDDFGTG SS ++L+ L Sbjct: 760 ANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIH 819 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF I SD ++ + D+ + L +L +E+VAEGVET+ Q K+L G +QG Sbjct: 820 TLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQG 879 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPARHNGHI 525 YL ++P+P +++ + PP + G I Sbjct: 880 YLISKPLPADQAERFIRNN--PPMKGLGTI 907 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 87/251 (34%), Positives = 136/251 (54%), Gaps = 5/251 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ + + ++EF L QP ++ RSQ+ IG E ++RW +P G +SP FIP+AEE Sbjct: 861 LTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEET 920 Query: 327 HLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 LI+ + ++M E+ RQ + V +N++ FR L + + S Sbjct: 921 GLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTP 980 Query: 384 QQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LEITE + + + + + H + IDDFGTG SSF +L+ D LKID+ Sbjct: 981 DCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDR 1040 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF I D + +T IIA+ L I++VAEGVETQEQ +L++ G +QG+L+++P Sbjct: 1041 SFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEP 1100 Query: 502 MPLRDFPKWLA 512 + DF + L Sbjct: 1101 LHSHDFVRMLK 1111 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 93/267 (34%), Positives = 144/267 (53%), Gaps = 5/267 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 L R+ ++ L + E L QP ++ +S + +GVE LLRW +P +G ++PDVFI Sbjct: 603 LTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFI 662 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AE+ LI+ + + + Q ++ S + +N++ F++ L L Sbjct: 663 PVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILA 722 Query: 379 -SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + L LEITE A+ D + I R L V+LAIDDFGTG SS S+L+ + Sbjct: 723 ATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVN 782 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF I +D+ ++ + IAL L E+VAEGVET+ Q ++LR ILQG Sbjct: 783 RLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQG 842 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPARHN 522 Y +++P+ +LA ++ PPA N Sbjct: 843 YFFSEPLSAAGIASYLAANRRPPALVN 869 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 142/258 (55%), Gaps = 5/258 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + ++ + + ++ ++ QP + S++ IG E L+RW +P G ISP FIP+ Sbjct: 629 ASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGMISPVDFIPM 688 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LIV + +V+ ++ Q + ++ + +N++ FR+ L+ + + + Sbjct: 689 AEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLVPMVRRILQET 748 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L LEITE + DVD + R ELH ++L+IDDFGTG SS ++L+ L Sbjct: 749 GLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPIQYL 808 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + D ++ + +I L + +N+ ++AEG+E Q+Q ++L G QGYL Sbjct: 809 KIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYL 868 Query: 498 YAQPMPLRDFPKWLAGSQ 515 +++P+P +F + L Q Sbjct: 869 FSRPIPAHEFEQLLVRQQ 886 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 91/264 (34%), Positives = 149/264 (56%), Gaps = 6/264 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R++ ++ + +F+L+ QP + S + G E LLRW++ R+G + P FIP Sbjct: 658 AITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIP 717 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AEE LI+PL ++V+ Q + P +Q V +NV+ R+ + + Sbjct: 718 LAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLA 777 Query: 379 SAHP-IQQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A Q+L LE+TE + +V+ IA+ L + V ++DDFGTG SS S+L+ L D Sbjct: 778 DAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLD 837 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + +DA ++ + +I+AL + L + ++AEGVET+EQ +L G H QG Sbjct: 838 QLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQG 897 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPA 519 YL+++P+PL F +W+ P + Sbjct: 898 YLFSKPLPLAGFEQWIGKPTAPAS 921 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 84/253 (33%), Positives = 139/253 (54%), Gaps = 5/253 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + E+ + EF L+ QP ++++ + IG+E L+RW +P +G +SP VFIPIAEE Sbjct: 1077 LLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEES 1136 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAH-PI 383 LI + +V+ ++Q + + V +N++ F + L + Q Sbjct: 1137 GLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDP 1196 Query: 384 QQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE A+ D + + +L+ V+L+IDDFGTG SS S+L+ + D LKID+ Sbjct: 1197 SMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQ 1256 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF IGS ++ + II++ + L+ + +AEGVET EQ +L + +QGY +++P Sbjct: 1257 SFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKP 1316 Query: 502 MPLRDFPKWLAGS 514 +P + K LA Sbjct: 1317 LPSTEVTKLLANQ 1329 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 88/255 (34%), Positives = 150/255 (58%), Gaps = 5/255 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ +++ L +F++ QP ++ RS + GVE L+RW +P +G + P FIP+ Sbjct: 608 AMERLLLQNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPM 667 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AE+ LI PL +V+ R+ + ++ +N++P FR L + + S Sbjct: 668 AEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAES 727 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 ++L LEITER ++D+++ + + R V+++IDDFGTG+SS ++L+ L L Sbjct: 728 GLEAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHAL 787 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+ F IG D+ ++ + + +IALG+ L ++++AEGVET+EQA +LR HG +QG+ Sbjct: 788 KIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFF 847 Query: 498 YAQPMPLRDFPKWLA 512 A+PMP + WL+ Sbjct: 848 IARPMPAGELTGWLS 862 >UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJN3_CITRO Length = 513 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 129/506 (25%), Positives = 223/506 (44%), Gaps = 6/506 (1%) Query: 18 VCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGL 77 + + L +S+ F+ + +Q + + + ++ L+ Sbjct: 7 FLMLSIFIPLGIMISLAFVVSTLILKQDISISGKTLLRFSSDMSAVSWRATKKAALLVNR 66 Query: 78 PCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILA-ELPAPQPLLRL 136 C L + A +R IG++++G + CS + G + P + LPA P + Sbjct: 67 RCPDMLDALTRTRAFTPYIRDIGVLENGEMTCSFVSGEKRQPFSQLSGLTLPALLPERMI 126 Query: 137 TIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHL 196 + + + +G + S+ V +++ + ++ + S LT+ + Sbjct: 127 LVAKRMAEGPDRPVILYAEKISAQKAVFTIVDSQYIQELMDILAAERSSVFRLTMGNGNA 186 Query: 197 LYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVG 256 + VDS +P + + ++ + + +A L + L++ S L Sbjct: 187 IVSG--VDSGEKPFLTQRFTSANGDIHLRVETSFSTLSAWWLQNLLIFILLSLCFSFLFV 244 Query: 257 YIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISP 316 + +S REI G+A +EF++ QP+ N C G E LLRW P +ISP Sbjct: 245 LLYRRWRQKSLSLGREIERGIANNEFQVHYQPVFNVGRSACGGAEALLRWPQPHGRFISP 304 Query: 317 DVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQY 376 D+FI AE IV LTR++ + + + F++ +N+AP H + D+ Sbjct: 305 DIFITAAENEGKIVALTRHLFDLIAKDVSRWKVPEGFYISVNIAPEHLISDDFVSDV-MA 363 Query: 377 WFSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 LILE+TER + + L + V++AIDDFGTG S S+L+ L Sbjct: 364 LKERLAKLGLILELTERSLIAEPAKVSAKLELLRSQQVEIAIDDFGTGYCSLSYLQQLPA 423 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID++F I + + + D II L Q L +++VAEGV ++ Q +Y+ GV+ +Q Sbjct: 424 DYLKIDRTFINTIDTSGSDVPILDTIITLSQNLGLQVVAEGVSSKHQLRYILDQGVNYIQ 483 Query: 495 GYLYAQPMPLRDFPKWLAGSQPPPAR 520 GYLYA+PM DF WL R Sbjct: 484 GYLYARPMSSADFMVWLDKDVQQQNR 509 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 76/259 (29%), Positives = 134/259 (51%), Gaps = 5/259 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + + + L ++EF +F QP ++ +S + +G+E L+RW +P G + P FI Sbjct: 649 VQALEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFI 708 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LI+P+ + + + + + V +N+ FR+ I+ + Sbjct: 709 PMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLK 768 Query: 379 -SAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + QL LE+TE + + + +L V LAIDDFGTG SS S+L+ + Sbjct: 769 KTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPIN 828 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+SF + ++ ++ + IIA+ LN+++ AEGVE Q ++L + +QG Sbjct: 829 RVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQG 888 Query: 496 YLYAQPMPLRDFPKWLAGS 514 YL + P+P +F ++L G Sbjct: 889 YLLSSPLPEAEFTRFLRGG 907 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 88/265 (33%), Positives = 138/265 (52%), Gaps = 6/265 (2%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARS-QQCIGVEILLRWNNPRQGWISPDVF 319 L +A+ + + L ++E L QP ++ + GVE L+RW +P G +SP F Sbjct: 777 LRSAHTLRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEF 836 Query: 320 IPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYW 377 IPIAE LI+P+ +VM + Q + ++ VG+N++ FR+ L + + Sbjct: 837 IPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQNLPATVARIL 896 Query: 378 FS-AHPIQQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 P L LE+TE + D + LHR V+++IDDFGTG SS ++L+ R Sbjct: 897 AEAGLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRI 956 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID+SF + D + + I++L + L +AEGVE EQ +LR G +Q Sbjct: 957 DKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQ 1016 Query: 495 GYLYAQPMPLRDFPKWLAGSQPPPA 519 GYL+++P+P + WL +P A Sbjct: 1017 GYLFSRPLPPDELAVWLRAWRPELA 1041 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 82/250 (32%), Positives = 134/250 (53%), Gaps = 7/250 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ L Q E ++ QP +N ++ + GVE L+RWN+ G I PD FIPIAEE Sbjct: 678 IKLENDLYKALEQEELVIYYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEET 737 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFS-AHPI 383 LIVP+ +V+ E RQ + + +N++ + L + Sbjct: 738 GLIVPIGEWVLKEACRQLKKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSP 797 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + + LE+TE + + + + ++L + LAIDDFGTG SS +L+ L LKIDK Sbjct: 798 KYIQLELTENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDK 857 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + D ++ +T+ II L + LN++++AEGVET+EQ ++L +++QGY +++P Sbjct: 858 SFVQDMTKD--DAAITNTIITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRP 915 Query: 502 MPLRDFPKWL 511 M D K Sbjct: 916 MAAEDIEKLF 925 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 143/260 (55%), Gaps = 6/260 (2%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + M ++ + EF ++ QP ++ +++ IG E L+RW +P+ G + P FI Sbjct: 949 INALEHMQLQGQLRHAIINQEFRIYYQPQIDTLNERMIGAEALVRWQHPQHGLVPPLKFI 1008 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFH---VGINVAPSHFRRGVLIKDLNQYW 377 P+AE LI+PL +V+ E RQ V+ ++ + +N++ F+RG +++ + Q Sbjct: 1009 PLAERSGLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRGNIVETVIQAL 1068 Query: 378 F-SAHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 S P + L LE+TE L DV+ L +KL+IDDFGTG SS S+L+ L Sbjct: 1069 ERSGLPAENLELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAV 1128 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID+SF + D ++ + II LG L + ++AEGVET+ Q + L+ + +Q Sbjct: 1129 DKLKIDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQ 1188 Query: 495 GYLYAQPMPLRDFPKWLAGS 514 GYL+++P+P DF + Sbjct: 1189 GYLFSRPIPAEDFSGLFEQA 1208 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 88/265 (33%), Positives = 135/265 (50%), Gaps = 5/265 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + L Q EF L+ QP ++ S IG E L+RW +P G + P F+PI Sbjct: 563 AVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPI 622 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LIVP+ +V+ E RQ + S V +N++ FR ++ + + Sbjct: 623 AEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKET 682 Query: 380 AHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE + D + + L ++LAIDDFGTG SS S+L+ + L Sbjct: 683 GMLPSYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTL 742 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I D ++++ +I +G+ L +VAEGVET+EQ +LR QG+L Sbjct: 743 KIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFL 802 Query: 498 YAQPMPLRDFPKWLAGSQPPPARHN 522 + +P+P +F + L + A N Sbjct: 803 FGRPLPADEFARLLLNDRGFSADLN 827 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 5/257 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 RM + + ++EFEL QP ++ + + IG+E L+RWN+P G + P+ FI +A Sbjct: 596 NERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRVA 655 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAH 381 EE +L++PL +V+ E RQ + + +N++ + L ++ + Sbjct: 656 EECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLIDNLMMTHQ 715 Query: 382 P-IQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LEITE + D + I +EL K V LAIDDFGTG SS S+L+ L LK Sbjct: 716 IKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLTRLK 775 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF I +D ++ + IAL + L + LVAEGVET+ Q +YLR G QGY + Sbjct: 776 IDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYF 835 Query: 499 AQPMPLRDFPKWLAGSQ 515 ++P+P + +++ Q Sbjct: 836 SKPLPANNIMAFVSRHQ 852 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 88/255 (34%), Positives = 142/255 (55%), Gaps = 5/255 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 L T + ++ L++ + EL+ QP L+ +S +G E LLRWN+P +G +SP FI Sbjct: 820 LKTHELLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFI 879 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LIV + +++ RQ + Q V +N++ F L+ + + Sbjct: 880 PLAEETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLE 939 Query: 379 -SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + P + L LEITE + D+ I L + V+LAIDDFGTG SS S+L+ Sbjct: 940 QTGVPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPIC 999 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKIDKSF + +DA ++ + + +AL ++++ +VAEG+E QEQ YL++ G QG Sbjct: 1000 SLKIDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQG 1059 Query: 496 YLYAQPMPLRDFPKW 510 YL ++P+P+ ++ Sbjct: 1060 YLISRPLPVAQCTQF 1074 >UniRef50_Q1LCJ1 EAL-containing signal transduction protein n=3 Tax=Proteobacteria RepID=Q1LCJ1_RALME Length = 529 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 144/532 (27%), Positives = 237/532 (44%), Gaps = 31/532 (5%) Query: 12 RRNRMIVCTICALVTLASTLSVR---FISQRNLNQQRVVQ---FANHAVEELDKVLLPLQ 65 +R+ +V TI L TLA+ V F++Q N++ Q FA+ A + V+ Sbjct: 2 QRSWFLVVTIV-LTTLATLFPVGIGVFMAQLEANRREADQLSVFADAATRRAELVMTQAI 60 Query: 66 AGSEVLLPLIGLPCSVAHL-PLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDIL 124 + + L PC+ A+L LR+ ++ G+ + G CS++ G P+ Sbjct: 61 NALQDMEMLREEPCTPANLVQLRRITYTYSYIQDAGIYRAGKRLCSALLG----PIEPGQ 116 Query: 125 AELPAPQPLLRLTIDRALIKGSP-------VLIQWTPAAGSSNAGVM-EMINIDLLTAML 176 LP P +D + P VLI ++ V ++++ + + Sbjct: 117 LPLPPPDWRTPDGLDYWFDQPVPFNAQRHVVLIGRNGNNVGLDSQVFVDVVDRESRMLAV 176 Query: 177 LEPQLPQISSASLTVDKRHLLYGNGLVD-----SLPQPEDNENYQVSSQRFPFTINVNGP 231 ++ +I SA+ + L Q +D S+ P + V P Sbjct: 177 VQTDAGRIFSATQGANLTRLQQAYSEHSYGSGADAAQEDDASIVLRKSRNMPLAVVVLAP 236 Query: 232 GATALA-WH-YLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPL 289 A LA W L L + + + +G + W R S E+ + +HE + QP+ Sbjct: 237 RAALLANWKSLLIGGLVVGLSAGVPLGILVWRRATRRFSLEGELRSAVRRHEMAVHYQPI 296 Query: 290 LNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQR-HVFP 348 + +GVE L+RW + + P++FIP+AE LI +T V+ + + + Sbjct: 297 ASLADNHWVGVEALVRWRRNGR-LVRPNLFIPMAENAGLIQQITDQVLDIILSELGTLLR 355 Query: 349 MSSQFHVGINVAPSHFRRGVLIKDLN-QYWFSAHPIQQLILEITERDALL-DVDYRIARE 406 F+V INV + + LN + S QQ+ +E TER L DV + Sbjct: 356 RFPSFYVSINVGVEDLKSRRFLSVLNARLRGSGIAPQQIRIEATERGFLEPDVARDTIQA 415 Query: 407 LHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQR 466 + IDDFGTG SS S+L++ + D LKIDKSF IG +A +STV IIA+ Q Sbjct: 416 FRDAGHPVYIDDFGTGYSSLSYLQSFKVDALKIDKSFVDTIGQEAASSTVAPHIIAMAQS 475 Query: 467 LNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPP 518 L ++++AEG+E + QA +LR GV QG+L+ +PMP + + + + P Sbjct: 476 LGLQVIAEGIEDKMQADFLREQGVDYGQGWLFGRPMPAVELAQLMTRATPQA 527 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 84/255 (32%), Positives = 141/255 (55%), Gaps = 5/255 (1%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 ++ + ++EF L+ QP ++ R+ Q +G E L+RW +P G ++PD FIPIAE+ Sbjct: 496 ELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSG 555 Query: 328 LIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQ 384 LI P+ +VM E RQ + + + V +N++ R+ ++++++ S Sbjct: 556 LIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPD 615 Query: 385 QLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 L LE+TE A+ I +L VKLA+DDFGTG SS S+L+ L + +KIDKS Sbjct: 616 YLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKS 675 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F I +D ++T+ II + L + ++AEGVE Q ++L++ G +QG++ ++P+ Sbjct: 676 FIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPV 735 Query: 503 PLRDFPKWLAGSQPP 517 P +F L P Sbjct: 736 PADEFALLLQNWPTP 750 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 85/256 (33%), Positives = 136/256 (53%), Gaps = 5/256 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 T R ++ L + EF L QP + + + +G+E LLRWN+ +G +SP FIP Sbjct: 760 LTMERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIP 819 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFH--VGINVAPSHFRRGVLIKDLNQYWFS 379 +AEE LI+P+ +V+ E RQ + V +N++ + ++ + Sbjct: 820 LAEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILED 879 Query: 380 A-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P Q L LEITE A+ ++D + +EL +K+AIDDFGTG SS + L+ L Sbjct: 880 TQLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISN 939 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 +KIDKSF + D + + IIA+ L + + AEGVET++Q L + + LQGY Sbjct: 940 IKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGY 999 Query: 497 LYAQPMPLRDFPKWLA 512 LY++P+P + +++ Sbjct: 1000 LYSKPLPAEECLRFVQ 1015 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 82/257 (31%), Positives = 135/257 (52%), Gaps = 5/257 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 +A + + L + + L QP ++ + +G E LLRW +P G ISP FIPI Sbjct: 891 SARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPI 950 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AE++ I+P+ +V+ I+Q + S + +N++ + FR+ L++ + + Sbjct: 951 AEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDES 1010 Query: 381 HPIQQ-LILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L LE+TE A+ D I +LH +K++IDDFGTG SS S+L+ + L Sbjct: 1011 KVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKL 1070 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I D + + II + L ++ +AEGVET Q +LR G + +QGY Sbjct: 1071 KIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYY 1130 Query: 498 YAQPMPLRDFPKWLAGS 514 +++P+P F +L Sbjct: 1131 FSKPLPAEQFVSYLQKQ 1147 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 87/255 (34%), Positives = 135/255 (52%), Gaps = 5/255 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A+ R+ + + + EF LF QP + + + IG+E L+RW +P QG +SP FIP Sbjct: 452 ASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIP 511 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFRRGVLIKDL-NQYWF 378 +AEE L++P+ ++ + E RQ V+ + +N++ FR + + Sbjct: 512 LAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGE 571 Query: 379 SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S P L LE+TE A+ DV+ + + L R V LAIDDFGTG SS S+L+ D Sbjct: 572 SGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDT 631 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF D ++ + I L LN+E++AEGVE EQ ++L + +QGY Sbjct: 632 LKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGY 691 Query: 497 LYAQPMPLRDFPKWL 511 Y +P+ F ++ Sbjct: 692 FYGRPLSGDKFEMFM 706 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 95/264 (35%), Positives = 143/264 (54%), Gaps = 5/264 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 A R+S + LA+ EF + QP ++ S IG+E LLRWN+ G ISP FIPI Sbjct: 590 AARRLSIESALRDALARDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISPVEFIPI 649 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LI+ + +V+ Q + HV +N++P FR+ L + S Sbjct: 650 AEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVAVNLSPRQFRQADLPAQVAHALAES 709 Query: 380 AHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L LEITE + D+D +A +L +KL++DDFGTG SS +++ D + Sbjct: 710 GLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSRFPFDKI 769 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I ++ VN+ + I +G+ LN+ ++AEGVET+ QA +LR +QGYL Sbjct: 770 KIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCDAIQGYL 829 Query: 498 YAQPMPLRDFPKWLAGSQPPPARH 521 +++P+P +F L +P P Sbjct: 830 FSRPLPPEEFAPLLLSCKPLPIAA 853 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 85/255 (33%), Positives = 135/255 (52%), Gaps = 5/255 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + + + H+ L+ QP L+ S E L+RW +P+ G ISP FIPI Sbjct: 633 MRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHPQLGMISPGDFIPI 692 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AEE LI+P+ +V+ E RQ + + V IN++ G L + Q S Sbjct: 693 AEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAYQLSHGKLTDQVIQALDSL 752 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L +E+TE + +D + + L +++A+DDFGTG SS ++L+ D+L Sbjct: 753 GLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDIL 812 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + I D + + II L LN+ +VAEGVET+ Q ++LR +G +QGY Sbjct: 813 KIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYY 872 Query: 498 YAQPMPLRDFPKWLA 512 + +P+P + ++L Sbjct: 873 FCKPLPSEECLEFLR 887 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 88/256 (34%), Positives = 136/256 (53%), Gaps = 5/256 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + E+ L + Q + EL QP + + Q +G+E L+RWN+P +G I P FIP AEE Sbjct: 450 LWLETELRLAIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEET 509 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPI 383 LI+PL +V+ RQ + + +N++ F R L + + + P Sbjct: 510 SLIIPLGEWVLNTACRQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPA 569 Query: 384 QQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LEITE + DV+ +L ++L+IDDFGTG SS S+L+ LKID+ Sbjct: 570 TLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDR 629 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + + ++ + II+L + IE++AEGVET EQ +L+RH QGYL+ +P Sbjct: 630 SFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRP 689 Query: 502 MPLRDFPKWLAGSQPP 517 +P +D + L + P Sbjct: 690 LPAKDIERQLKTAHLP 705 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 92/269 (34%), Positives = 138/269 (51%), Gaps = 5/269 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 A RMS + + L EFEL+ QP + + + G+E L+RW N G + P FIP+A Sbjct: 380 ASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLA 439 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 EE LIV + +V+ Q + + V +N++P FR L + + Sbjct: 440 EETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVLRETG 499 Query: 381 HPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 + L LEI E + DV+ + EL VKL++DDFGTG SS S+L+ LK Sbjct: 500 LDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLK 559 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID SF I +D ++ + II++ LN+ +VAEGVET+ Q ++LR HG + +QGY Sbjct: 560 IDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYL 619 Query: 499 AQPMPLRDFPKWLAGSQPPPARHNGHITP 527 ++P+P +F L + R G P Sbjct: 620 SRPLPAAEFEGMLRENLRLRLREEGESLP 648 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 84/266 (31%), Positives = 144/266 (54%), Gaps = 4/266 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + ++ R+ E+ + L + +FEL+ QP + + +GVE L+RW++P++G Sbjct: 357 MFSAEMHHKSSTRLLLETELRVALEEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGL 416 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKD 372 + P FIP+AEE LIV + +V+ E RQ + + +N++ FR+ L++ Sbjct: 417 LCPSSFIPVAEETGLIVRIGEWVLREACRQAMEWKALGVPLRMSVNLSGRQFRQENLVQT 476 Query: 373 LNQYWF-SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWL 429 + + + L LEITE + D + R +L + LAIDDFGTG SS ++L Sbjct: 477 MTKIIERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYL 536 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + LKID+SF I +D + +T I + L +E+VAEGVET+ Q ++LR G Sbjct: 537 KRFPVSRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQG 596 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGSQ 515 ++QGYL+++P+ R+ + + + Sbjct: 597 SDMVQGYLFSRPVSAREMAELVITGK 622 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 140/261 (53%), Gaps = 5/261 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 +A R+ ++ L+ EF L QPL++AR Q +GVE L+RW P + +SP FI Sbjct: 860 IAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFI 919 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWF 378 PIAEE LIVPL +V+ Q + + + +N++ F+ L++ + Q Sbjct: 920 PIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLE 979 Query: 379 SA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 P L LE+TE + + I + L V+L+IDDFGTG SS ++L+ D Sbjct: 980 ETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPID 1039 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + D + + IIA+ + L ++++AEGVE+++Q L +HG QG Sbjct: 1040 KLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQG 1099 Query: 496 YLYAQPMPLRDFPKWLAGSQP 516 YL+ +P+P ++ W ++ Sbjct: 1100 YLFHRPVPAQELEVWFRENKR 1120 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 87/269 (32%), Positives = 145/269 (53%), Gaps = 5/269 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 +L R+ + ++ + EF++F QP ++ ++ Q IG E LLRW++P G I P Sbjct: 819 LFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSE 878 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFRRGVLIKDLNQY 376 FI +AEE LI + +V+ ET RQ + ++ +N++P G + + + Sbjct: 879 FISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTI 938 Query: 377 WF-SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 S P L LE+TE + + I + L ++ +++AIDDFGTG SS ++L+ Sbjct: 939 LHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFP 998 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 DVLKIDK F I + + + I+A+G L + ++AEGVET+ Q ++L + G Sbjct: 999 LDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYY 1058 Query: 494 QGYLYAQPMPLRDFPKWLAGSQPPPARHN 522 QGYLY+ P+P +F + L+ PP + + Sbjct: 1059 QGYLYSMPLPAEEFAQLLSQQNPPVTQAH 1087 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 87/256 (33%), Positives = 136/256 (53%), Gaps = 5/256 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R+ ++ L+ +E L+ QP + S Q +G+E LLRW +P G SP F+P Sbjct: 310 AAFERLMLENQLRKVLSNNELILYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVP 369 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 +AEE LIVP+ +V+ +Q + V +NV+ F R L++ + + Sbjct: 370 VAEEMGLIVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEALAD 429 Query: 379 SAHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S L LE+TE + + + + E+ V +AIDDFGTG SS S+L+ DV Sbjct: 430 SNLNPIYLELELTESVLMAEESGIFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDV 489 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF I SD ++ +T IIA+ L + +VAEGVETQ Q +L++ ++QGY Sbjct: 490 LKIDRSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGY 549 Query: 497 LYAQPMPLRDFPKWLA 512 +++P+ + L Sbjct: 550 YFSRPICSEKMTQTLQ 565 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 141/256 (55%), Gaps = 6/256 (2%) Query: 262 ATAYR-MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 A + R ++ + L +++ +L QP ++ S + +G E LLRW++P G + P FI Sbjct: 598 ARSERTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHPELGAVPPAEFI 657 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHV--GINVAPSHFRRGVLIKDLNQYWF 378 P+AE LI+P+ +V+ +++Q + + + +N++ FR L + + Sbjct: 658 PVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHADLPELVTSILN 717 Query: 379 SA-HPIQQLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A P L LE+TE A+ D + LH + V+++IDDFGTG SS S+L+ R Sbjct: 718 EAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVY 777 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+SF I D+ + + II++ L ++ +AEGVET+ Q ++L+ G +QG Sbjct: 778 KIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQG 837 Query: 496 YLYAQPMPLRDFPKWL 511 Y +++P+P+ F ++ Sbjct: 838 YYFSRPLPVEQFEAFM 853 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 95/273 (34%), Positives = 151/273 (55%), Gaps = 10/273 (3%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A +R + E+ + + +F L Q ++ +S + G E LLRW +P +G I P FIP Sbjct: 562 AVTHRAALETELRKAIDEQQFHLCFQVQMD-QSGRPTGGEALLRWEHPTRGTIPPASFIP 620 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AEE LIVP+ ++V+A RQ + P +S + +NV+ FR+ L Sbjct: 621 LAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLRDLLL 680 Query: 379 -SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + P +L LE+TE L D + I EL + ++ ++DDFGTG SS ++L+ L + Sbjct: 681 QTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRLPLN 740 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + +D ++ + + I+ALG L +E++AEGVET Q ++L G QG Sbjct: 741 QLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQG 800 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPARHNGHITPI 528 YL+ +P+PL +F ++L G A NG + I Sbjct: 801 YLFGRPLPLLEFEQFLQGCD---AGANGALVDI 830 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 91/251 (36%), Positives = 135/251 (53%), Gaps = 6/251 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A+A R++ E+ + + E LF QP+++ E L+RW +P QG ++PD FIP Sbjct: 320 ASAERLTLEAELRHAVERGELRLFYQPIVD-PDGTVRAAEALVRWQHPEQGLLAPDRFIP 378 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWF- 378 +A+E LI + +V+ E Q + + F V +NV+ F + L++ + + Sbjct: 379 LADETGLITEIGAWVLTEACYQGRCWHDAGHERFRVSVNVSAVQFGQPRLLETVREALRG 438 Query: 379 SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S P L LEITE + DV+ + R L V++A+DDFGTG SS S+L L D Sbjct: 439 SGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSSLSYLRRLPIDT 498 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 +KIDKSF + ++ ++ + IIAL L + VAEGVET EQ LRR G QGY Sbjct: 499 VKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATLRREGCDSFQGY 558 Query: 497 LYAQPMPLRDF 507 Y +P+P F Sbjct: 559 RYGRPVPAEVF 569 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 90/255 (35%), Positives = 136/255 (53%), Gaps = 5/255 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T R+ + L Q+EF L QPL+N + IGVE L+RW +P G I PD FI + Sbjct: 324 TLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIHV 383 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLN-QYWFS 379 AEE LI P+ +V+ E RQ + + + +NVAP FR+ ++ + S Sbjct: 384 AEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALATS 443 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 +L LE+TER + D D + LHR V+L++DDFGTG SS ++L+ L Sbjct: 444 GLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKL 503 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +D + + I+++G+ L + ++AEGVE EQ LR+ G + QGY Sbjct: 504 KIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYY 563 Query: 498 YAQPMPLRDFPKWLA 512 +++PM L Sbjct: 564 FSRPMSADGMADMLR 578 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 135/258 (52%), Gaps = 5/258 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R+ + L + L QP ++ ++ IG+E LLRW +P G +SP FIP+AE Sbjct: 439 ERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAE 498 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 E LI+P+ +V+ RQ + + + +N++ F++ I L+ S Sbjct: 499 ETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFKQAGFIDRLDAIIQRSGI 558 Query: 382 PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L +E+TE + D + ++ + +KLAIDDFGTG S S+L+ D +K+ Sbjct: 559 NPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKV 618 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I + ++ +T+ IIA+ L IE++AEG+ET+EQ +L+ QGY + Sbjct: 619 DRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFG 678 Query: 500 QPMPLRDFPKWLAGSQPP 517 +P+P+ + LA P Sbjct: 679 RPVPVETAAEILAQQYPR 696 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 136/264 (51%), Gaps = 5/264 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R+ + L +E L+ QP ++ S + IG E L+RW +P G ISP FIP Sbjct: 838 AAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALVRWQDPAHGLISPAQFIP 897 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDL-NQYWF 378 +AEE LI L +V+ E RQ + ++ +N++P FR +++ + N Sbjct: 898 VAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRNSNILESVFNALKQ 957 Query: 379 SAHPIQQLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + +P L LE+TE + + I L + ++LAIDDFGTG SS ++L+ DV Sbjct: 958 TGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDV 1017 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKIDKSF I + + I+A+ L ++++AEGVET+EQ +L+ G QGY Sbjct: 1018 LKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGY 1077 Query: 497 LYAQPMPLRDFPKWLAGSQPPPAR 520 L + P+P F + L + Sbjct: 1078 LMSPPVPADQFEQLLRAQAEDSEK 1101 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 87/257 (33%), Positives = 138/257 (53%), Gaps = 7/257 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R ++ LA+ +F L QP ++ R GVE L+RW +P++G +SP FIP+AEE Sbjct: 1242 RAELENDLRTALAREQFMLHYQPQID-RRGSVTGVEALVRWPHPQRGMVSPGEFIPLAEE 1300 Query: 326 HHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDL-NQYWFSAH 381 L++PL R+V+ Q + P + +NV+ F ++D+ + Sbjct: 1301 TGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAITATGA 1360 Query: 382 PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P +L LE+TE + D++ IA L V ++DDFGTG SS S+L+ + D LKI Sbjct: 1361 PASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLKI 1420 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + +D ++ + D IIAL + L ++++AEGVET EQ L + G QGY ++ Sbjct: 1421 DQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFS 1480 Query: 500 QPMPLRDFPKWLAGSQP 516 +P+P +L P Sbjct: 1481 RPLPETALEDFLVQKLP 1497 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 88/249 (35%), Positives = 133/249 (53%), Gaps = 4/249 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + + L + EFEL QP ++ + +GVE LLRW +P QG ISP F+PIAEE Sbjct: 832 LHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEET 891 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ 384 LIVP+ +V+ E RQ ++ + + +N++ F R V+ S + Sbjct: 892 GLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSRSVIEAIDEALADSGLDPR 951 Query: 385 QLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 L +E+TE + D + L + + +A+DDFGTG SS ++L+ D LKID+S Sbjct: 952 WLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRS 1011 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F I D N + D II + L I+++AEGVET+ Q YLR+ G +QGYL ++P Sbjct: 1012 FIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQ 1071 Query: 503 PLRDFPKWL 511 P +W+ Sbjct: 1072 PAAALGQWM 1080 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 135/257 (52%), Gaps = 5/257 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ ++ LA EF L Q ++ R + IG E L+RW++ +G ++PD FIP+ Sbjct: 808 ARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPL 867 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LIVPL +V+ + + V +N++ R L++ + + + Sbjct: 868 AEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRET 927 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P ++L LE+TE + + + R L V+L+IDDFGTG SS ++L+ L D L Sbjct: 928 GLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDEL 987 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+ F I D+ + + IIA+ + L + ++AEGVET EQ +L R G QGYL Sbjct: 988 KIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYL 1047 Query: 498 YAQPMPLRDFPKWLAGS 514 + +P+P F + + Sbjct: 1048 FGRPLPAEAFAQVMRAC 1064 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 141/263 (53%), Gaps = 6/263 (2%) Query: 258 IAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG-WISP 316 + A RM+ + + EFEL+ QP + A + +G E L+RW P +G +SP Sbjct: 788 TMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVSP 847 Query: 317 DVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLN 374 FIP+AEE LI+P+ +V+ + RQ ++ + + +N++ F++ L ++N Sbjct: 848 AEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEIN 907 Query: 375 QYWFS-AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLET 431 P + L LEITE + DV A +L + LA+DDFGTG SS S+L+ Sbjct: 908 WILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKN 967 Query: 432 LRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVH 491 D LKID+ F + +D + V II L L +E+VAEGVE +Q +LR+ G Sbjct: 968 FPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCD 1027 Query: 492 ILQGYLYAQPMPLRDFPKWLAGS 514 + QGY +++P+P ++F ++L Sbjct: 1028 VFQGYHFSRPLPAKEFEQFLRSQ 1050 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 98/274 (35%), Positives = 155/274 (56%), Gaps = 13/274 (4%) Query: 258 IAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPD 317 + R++ R++ GL + EF+++ QP+L+ R+++ + VE L+RW++P +G ISP Sbjct: 485 AMYAQAVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVEALVRWHHPERGLISPG 544 Query: 318 VFIPIAEEHHLIVPLTRYVMAETIRQRHVF----PMSSQFHVGINVAPSHFRRGVLIKDL 373 FIPIAEE LIVPL +V+AE RQ + P + V +N++ FR L D+ Sbjct: 545 EFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFRHPSLTADI 604 Query: 374 NQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLE 430 Q + P L LEITE + D + R+L + V+LA+DDFGTG SS S+L+ Sbjct: 605 AQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTGYSSLSYLK 664 Query: 431 TLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGV 490 D +KID+SF + + + + +IA L +++ EGVET+EQ ++L R G Sbjct: 665 RFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQLEFLERVGC 724 Query: 491 HILQGYLYAQPMPLRDFPKWL------AGSQPPP 518 ++QG+L+A PMP + ++L +G PP Sbjct: 725 DLVQGFLFAPPMPPDEVARFLHTGLQTSGFHPPA 758 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 85/255 (33%), Positives = 130/255 (50%), Gaps = 5/255 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ L F L QP + S + G E L+RWN+P +G ISPD FIP+AEE Sbjct: 507 LELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEET 566 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAH-PI 383 LI+ L +V+ E RQ + + +N++ F + ++ + Sbjct: 567 GLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDP 626 Query: 384 QQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE + D D ++ EL + L++DDFGTG SS ++L D LKID+ Sbjct: 627 HWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDR 686 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + SDA ++V + +I + L I +AEGVET+EQ +L +QGYL+++P Sbjct: 687 SFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKP 746 Query: 502 MPLRDFPKWLAGSQP 516 +P D LA P Sbjct: 747 LPANDLAALLANPTP 761 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 93/262 (35%), Positives = 137/262 (52%), Gaps = 5/262 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R++ + L + EF L QPLL S + +GVE LLRW++P G +SP FIP+ Sbjct: 411 AMERLTLETSLRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPL 470 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AEE LIVP+ +V+ Q + V +NV+ FR + + Sbjct: 471 AEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAV 530 Query: 380 AHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L LE+TE + + I R+L + V LAIDDFGTG SS S+L+ D L Sbjct: 531 GLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRL 590 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID++F + D N+ + + I+AL LN+++VAEGVET EQ +L ++QGY Sbjct: 591 KIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYH 650 Query: 498 YAQPMPLRDFPKWLAGSQPPPA 519 A+P+P R+ ++L Q A Sbjct: 651 IARPLPPRNLLEFLEARQEDRA 672 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 93/270 (34%), Positives = 144/270 (53%), Gaps = 6/270 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ R + L + EFEL QP++ A + + +E+LLRW +P G +SP FIP+ Sbjct: 816 AIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFIPL 875 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYWFS- 379 AEE LI P+ +V+ + RQ + + IN++ F + LI + Sbjct: 876 AEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQVAGALAEA 935 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 +L LE+TE + + + EL V+L+IDDFGTG SS S+L+ D L Sbjct: 936 GIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTL 995 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + D N+ + + I+A+ ++L+ +VAEGVET+ QA +L G +LQGYL Sbjct: 996 KIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYL 1055 Query: 498 YAQPMPLRDFPKWLAGSQPPP-ARHNGHIT 526 +++P+P + P +L P P R G I Sbjct: 1056 FSRPLPAAELPAFLQQRSPQPLTRERGAIV 1085 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 5/259 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + E+ LA EF L QP +N + + E LLRWN+P +G ISP VFIP+ Sbjct: 514 AHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPL 573 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LIVP+ + + RQ + + + +NV+ FR + + + Sbjct: 574 AEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKET 633 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L LE+TE + DV I L V LAIDDFGTG SS S L+ L Sbjct: 634 GLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRL 693 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I DA + +T II+L Q+L + ++AEGVE++ Q ++L++ G +QGY Sbjct: 694 KIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYF 753 Query: 498 YAQPMPLRDFPKWLAGSQP 516 +++P+ F L+ ++P Sbjct: 754 FSRPLSAEAFESLLSSARP 772 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 86/252 (34%), Positives = 138/252 (54%), Gaps = 5/252 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 S +++ L L + E L QP + S GVE L+RW++P +G +SP FIP+AEE Sbjct: 667 FSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEET 726 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 IV + +V+ Q + + + +N++ R+ L + + + Sbjct: 727 GQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDA 786 Query: 384 QQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LEITE + D +R E+ V+L+IDDFGTG SS ++L+ + + LKID+ Sbjct: 787 RHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQ 846 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF I +D ++ + II+LG RLN+ ++AEGVETQEQ +LR G +QGY Y++P Sbjct: 847 SFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRP 906 Query: 502 MPLRDFPKWLAG 513 + DF +++ Sbjct: 907 LLAEDFMRFVKA 918 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 83/257 (32%), Positives = 134/257 (52%), Gaps = 5/257 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 +A + ++ L E L QP ++ +G E LLRW +P+ G +SP FIPI Sbjct: 1142 SARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPI 1201 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LI+P+ +V+ + Q V+ V +N++ FR+ L +++ Sbjct: 1202 AEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAE 1261 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L LE+TE A+ + IA +L V+++IDDFGTG SS S+L+ R L Sbjct: 1262 GLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKL 1321 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF A + +D + + I+L + L ++ +AEGVE++ Q +LR G QGYL Sbjct: 1322 KIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYL 1381 Query: 498 YAQPMPLRDFPKWLAGS 514 +++P+ F ++ Sbjct: 1382 FSRPLAPAQFAAFVRAH 1398 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 93/258 (36%), Positives = 139/258 (53%), Gaps = 4/258 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R+S + L EF L QPL+ S + +G E+L+RW P + + P FIP Sbjct: 623 AANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIP 682 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 +AEE LIVPL +V+ E RQ + + + +N++P F R L+ + + S Sbjct: 683 LAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGS 742 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P QL LE+TE + + + L R V LAIDDFGTG SS ++L+ D L Sbjct: 743 GLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKL 802 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + D+ ++ + IIA+ + L +E +AEGVET +Q +LR+ G QGYL Sbjct: 803 KIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYL 862 Query: 498 YAQPMPLRDFPKWLAGSQ 515 ++ P+P F +WL + Sbjct: 863 FSPPLPAEAFERWLRDGR 880 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 89/250 (35%), Positives = 131/250 (52%), Gaps = 5/250 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R++ E+ LA E E QP ++ + G E L+RW +P + + P FI + Sbjct: 438 ARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAV 497 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LIVPL V+ RQ + + V +N++ FR+ L++ + + Sbjct: 498 AEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAET 557 Query: 380 AHPIQQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 QL LEITE A+ D D +A L R+ + LAIDDFGTG SS S+L+ D L Sbjct: 558 GAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTL 617 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I +D ++ + IIA+ + L + L+AEGVET Q ++L G QG+L Sbjct: 618 KIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFL 677 Query: 498 YAQPMPLRDF 507 + + MP DF Sbjct: 678 FGRAMPAEDF 687 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 90/256 (35%), Positives = 136/256 (53%), Gaps = 5/256 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + + +AQ + + QP ++ S IG E LLRW++P G ISP FIPIAEE Sbjct: 604 LQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEES 663 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA-HPI 383 LI+ + +V+ + Q + + + +N++ FR L + Q P Sbjct: 664 GLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPP 723 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 Q L LE+TE A+ D I LH + V+++IDDFGTG SS S+L+ + LKID+ Sbjct: 724 QYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQ 783 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF I +DA + + II + + L ++ +AEGVET EQ +LR G H QGY Y++P Sbjct: 784 SFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKP 843 Query: 502 MPLRDFPKWLAGSQPP 517 +P DF ++ G+ Sbjct: 844 LPAADFETFILGASAA 859 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 135/256 (52%), Gaps = 5/256 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + LA EF +F QP ++A +G E L+RW +P +G + P FIP+ Sbjct: 287 AKSRLELEGRMRRALANQEFVVFYQPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPV 346 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AEE I P+ +V+ ++ Q ++ + V +NV+ FR L++ + + S Sbjct: 347 AEESGQIEPIGTWVLRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDST 406 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L LEITE + DVD + + L + L+IDDFGTG SS S+L L Sbjct: 407 GLDPKWLELEITESMLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTL 466 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID++F A + ++ + + II L + LN+E+VAEG E E +LR +G +QG+ Sbjct: 467 KIDRAFIADVDTNPKTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFY 526 Query: 498 YAQPMPLRDFPKWLAG 513 Y++P+P +F + + Sbjct: 527 YSRPVPADEFERMMGQ 542 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 89/250 (35%), Positives = 130/250 (52%), Gaps = 4/250 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R+ + GL + EF L QP++ + +G E L+RWN+P +G I+P FIP Sbjct: 560 AAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIP 619 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 +AEE LIVPL +V+ RQ + + +N++ FR G L + + Sbjct: 620 LAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRT 679 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L LEITE + D D +A L V+L+IDDFGTG SS ++L+ D L Sbjct: 680 GFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDAL 739 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I D + + ++A+ ++ + ++AEGVET EQ +LR G QGYL Sbjct: 740 KIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYL 799 Query: 498 YAQPMPLRDF 507 +P DF Sbjct: 800 VGRPQAAADF 809 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 +A R ++ LA+ +F L Q + ++ G E+LLRW +P++G +SP FI Sbjct: 569 IAVKVRAEMEDDLLRALAEKQFLLHYQAQM--VGERLTGAEVLLRWQHPQRGMVSPAEFI 626 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW 377 P+AEE LI+PL +V+ Q + P + + +NV+ FR+ + + Sbjct: 627 PLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVL 686 Query: 378 F-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 + Q+L LE+TE + +V+ I L + V ++DDFGTG SS S+L+ L Sbjct: 687 EKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPL 746 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID+SF + +D+ ++++ I+AL L + ++AEGVET+ Q +L G H Q Sbjct: 747 DHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQ 806 Query: 495 GYLYAQPMPLRDFPKW 510 GY +++P+P+ DF + Sbjct: 807 GYYFSRPLPIEDFESF 822 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 141/261 (54%), Gaps = 5/261 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 +A R+ + L++++FEL QP ++ + + +G E LLRW +P G ISP FIP+ Sbjct: 1041 SARRLLLENALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPV 1100 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LI+ + +V+ ++Q + + V IN++ FR+ L + + Q A Sbjct: 1101 AEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEA 1160 Query: 381 H-PIQQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + + LE+TE A+ + V + +LH ++++IDDFGTG SS S+L + + L Sbjct: 1161 NLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKL 1220 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + D + + II L + + +AEGVET Q +LR G + +QGY Sbjct: 1221 KIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYY 1280 Query: 498 YAQPMPLRDFPKWLAGSQPPP 518 +++P+ + F ++ G P Sbjct: 1281 FSRPLTVALFEAFVLGHAEIP 1301 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 90/274 (32%), Positives = 148/274 (54%), Gaps = 8/274 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + R++ +E++ L Q +F L+ QP +N + GVE L+RW + ++G ISP FIP+ Sbjct: 797 SNKRLALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFIPV 856 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LIVP+ +++ + + F V +N++ F+ L++ +++ S Sbjct: 857 AEETGLIVPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNS 916 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 A L EITE + +V+ I + V LAIDDFGTG SS S+L+ + L Sbjct: 917 AIDPSMLEFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTL 976 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF +G D+ ++ + II++ Q LN+ +VAEG E EQ +L+ G +QGY Sbjct: 977 KIDQSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYY 1036 Query: 498 YAQPMPLRDFPKWLA---GSQPPPARHNGHITPI 528 +++P+P D + L G + PP G + + Sbjct: 1037 FSRPLPQTDLERLLKDPNGIKMPPTVEMGKLVEV 1070 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 87/255 (34%), Positives = 139/255 (54%), Gaps = 6/255 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 RM R + + +++F+L QP + S + +GVE LLRW +P G ISP VFI + E Sbjct: 385 RMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFISLIEN 444 Query: 326 HHLIVPLTRYVMAETIRQRHVFPM---SSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 +LI+P+ +V+ E +Q + + +N A F + L++ + + S Sbjct: 445 TNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQFAQADLVETVAKALQKSGL 504 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L LEITE A+ D++ I + L V +AIDDFGTG SS ++L+ D+LKI Sbjct: 505 AAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRFPIDILKI 564 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 DKSF I ++ + I + L +E++AEGVET+ Q ++LR HG ++QGYL++ Sbjct: 565 DKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFS 624 Query: 500 QPMPLRDFPKWLAGS 514 +P+P + L Sbjct: 625 RPVPPEQIAEILQKG 639 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 87/254 (34%), Positives = 138/254 (54%), Gaps = 5/254 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R + L + E +L QP ++ + G+E LLRW +P +G ISP FIP+ Sbjct: 798 AERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPL 857 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LI PL +V+ + RQ ++ +S V +N++ F + L K++ + + Sbjct: 858 AEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRET 917 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LEITE L +++ I EL + V+ +IDDFGTG SS S+L+ L D + Sbjct: 918 GLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRI 977 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KI + F I +D + + IA+ + L ++L+AEGVE +Q +L HG H +QGY Sbjct: 978 KIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYY 1037 Query: 498 YAQPMPLRDFPKWL 511 +A+PMP ++ P ++ Sbjct: 1038 FAKPMPAQEVPSFI 1051 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 82/253 (32%), Positives = 131/253 (51%), Gaps = 5/253 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R+ E+ L Q+E L+ QP +N + + +E L+RW++P G I P FIP Sbjct: 1221 AAVKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIP 1280 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFRRGVLIKDLNQYW-F 378 +AEE LI + +++ E Q + FH+ +NV+ R L+ + Sbjct: 1281 LAEETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKE 1340 Query: 379 SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + P + L LEITE + I R L +K AIDDFGTG SS ++L++ D+ Sbjct: 1341 TGLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVDI 1400 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+ F + S+ ++ + IIAL L +++VAEGVETQ Q ++L+ H QG+ Sbjct: 1401 LKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGF 1460 Query: 497 LYAQPMPLRDFPK 509 ++P+ + + Sbjct: 1461 YLSEPLSAAEIEQ 1473 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 137/262 (52%), Gaps = 5/262 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 RM ++ ++EF L+ QP + + GVE LLRW +P +G +SPD FIP+ Sbjct: 435 ARDRMFLEIDLRHATLRNEFVLYYQPKASCADGRITGVEALLRWQHPERGIVSPDQFIPL 494 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYWF-S 379 EE LIV + R+V+ E RQ + + V +N++ + L+ D+ + Sbjct: 495 LEETGLIVQVGRWVLEEACRQAVEWQAAGLNIPSVSVNLSARQLQAETLLTDVAATLEKT 554 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LEITE + + D I L + V +++DDFGTG SS ++L+ D + Sbjct: 555 GLNAACLDLEITESMLMDNADMAIQTLSALKKMGVTISLDDFGTGYSSLAYLKRFPLDAI 614 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 K+D+SF I +D+ ++++T +I + L +++VAEGVET EQ L H ++QGY Sbjct: 615 KVDRSFVQDIAADSDDASITRAVITMAHHLKLKVVAEGVETPEQLALLISHQCDVIQGYF 674 Query: 498 YAQPMPLRDFPKWLAGSQPPPA 519 +++PMP + L + P Sbjct: 675 FSRPMPASGMTELLVSDRRLPD 696 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 93/263 (35%), Positives = 142/263 (53%), Gaps = 5/263 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 +T R+ ++ LA+ EF+L QP ++ G+E LLRW + G +SP FIP Sbjct: 575 STLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIP 634 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYWF- 378 IAEE +LI + +V+ + RQ + V +N++ +G ++ + + Sbjct: 635 IAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILEH 694 Query: 379 SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S P L LEITE A+ + I + L V++AIDDFGTG SS S+L+ L DV Sbjct: 695 SNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDV 754 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + D ++ + II++GQ LN++ VAEGVE +E ++L HG QGY Sbjct: 755 LKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGY 814 Query: 497 LYAQPMPLRDFPKWLAGSQPPPA 519 L+++P+P + L SQ A Sbjct: 815 LFSRPVPAATMEQLLLESQALSA 837 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 138/259 (53%), Gaps = 4/259 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + + ++E L QP + A S + G E L+RW +P G + P FIPI Sbjct: 832 ALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPAQFIPI 891 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYWFSAH 381 AE+ LIVPL +V+ E RQ+ + S VG+N++ FRR + + Q Sbjct: 892 AEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRRADFVDSVVQVLAETG 951 Query: 382 P-IQQLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 +++ LEITE + D R REL + LA+DDFGTG SS ++L+ L LK Sbjct: 952 ANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYSSLAYLKRLPIGRLK 1011 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + D ++ VT ++L + L +E+VAEGVET Q +L G H LQGYLY Sbjct: 1012 IDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTLQGYLY 1071 Query: 499 AQPMPLRDFPKWLAGSQPP 517 ++P+ + F W+ ++ Sbjct: 1072 SRPLDVAAFEAWMQATEEA 1090 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 96/261 (36%), Positives = 138/261 (52%), Gaps = 7/261 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A A R+ ++ L + EFEL+ QP+L+ G E LLRW++P G I PD FIP Sbjct: 592 AAAERLHLENDLREALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRFIP 651 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-F 378 +AEE LI P+ +V+ E Q + V +NV+ F R L + + Q Sbjct: 652 LAEETGLIRPIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEA 711 Query: 379 SAHPIQQLILEITERDALL---DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A L+LEITE + + + R REL V L++DDFGTG SS S+L+ D Sbjct: 712 QALAPDALVLEITESVLMHGSANTETR-LRELKAMGVGLSLDDFGTGYSSLSYLKRFPID 770 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKIDKSF + D + T+ +IA+G L +++VAEGVE+ E LRR +QG Sbjct: 771 TLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQG 830 Query: 496 YLYAQPMPLRDFPKWLAGSQP 516 Y +++P+P R +W+ Q Sbjct: 831 YHFSRPLPARALSRWIQQHQC 851 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 144/258 (55%), Gaps = 5/258 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A ++ ++ + LA+ E + QP ++ ++ + +G+E L+RW++P G I P FIP Sbjct: 441 AALRSLTLEGDLRMALARRELFVEYQPEIDLKTGETVGLETLVRWDHPTLGLIPPLDFIP 500 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 +AEE LI+P+ ++++ Q ++ S V +N++ FR+ LIK + + Sbjct: 501 LAEETGLILPIGEWILSIACMQNAIWHKSGLEPIRVAVNLSGHQFRQRNLIKTIAKTLTN 560 Query: 379 SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S Q L LEITE + + I +EL V+LA+DDFGTG SS S+L DV Sbjct: 561 SRLDPQHLELEITESTLMENAASTIHTVKELKSMGVRLAVDDFGTGYSSLSYLRRFPLDV 620 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + +A ++ +T IIA+ LN+E++AEGVE ++Q ++L+ + + QGY Sbjct: 621 LKIDRSFIRDVTINADDAAITRAIIAMAHNLNLEVIAEGVENEQQLQFLQENNCDMAQGY 680 Query: 497 LYAQPMPLRDFPKWLAGS 514 Y +P+ K L Sbjct: 681 YYCRPLTPAKLTKHLEKQ 698 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 7/256 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + + R++ E+ + + +F+L+ Q ++ + + +G E LLRW +P G ++P FIP Sbjct: 754 SLSARLALELELRKAIEKDQFQLYYQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIP 812 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AEE LIVP+ +V+ Q + P++ + INV+ F + + + Sbjct: 813 MAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVD 872 Query: 379 S-AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 L LE+TE L +VD I R L + V ++DDFGTG SS +L+ L D Sbjct: 873 HYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLD 932 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF I SD+ + + IIA+ Q + + ++AEGVET+EQ + L R G + QG Sbjct: 933 QLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQG 992 Query: 496 YLYAQPMPLRDFPKWL 511 YL+++P+P+ F K L Sbjct: 993 YLFSKPVPVEQFEKLL 1008 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 133/262 (50%), Gaps = 5/262 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 +A R+ + L+ E L QPL++AR+ +GVE L+RW P + + P FI Sbjct: 528 VAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFI 587 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 PIAEE LIVPL +V+ +Q + + + +N++ F+ L+ + + Sbjct: 588 PIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILE 647 Query: 379 SA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 P L LE+TE + V+ I +L V LAIDDFGTG SS +L+ D Sbjct: 648 ETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPID 707 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+ F + D + + IIA+ + L + ++AEG+E++EQ +LR+ QG Sbjct: 708 KLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQG 767 Query: 496 YLYAQPMPLRDFPKWLAGSQPP 517 YL+ +P+P + WL P Sbjct: 768 YLFHRPVPAIELEAWLREHSVP 789 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 95/256 (37%), Positives = 143/256 (55%), Gaps = 5/256 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 ++S + E+ L + EF L QP ++ R+ + + E L+RWN+ +G + P FI +A Sbjct: 499 RKKLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGLVYPGDFIALA 558 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 EE LIVP+ +V+ RQ + + +NV+ F+ LI+ + S Sbjct: 559 EETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIETVATALSESG 618 Query: 381 HPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LEITE + D+ IAR EL VKLA+DDFGTG SS S L+ LK Sbjct: 619 LDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSALKRFPLSRLK 678 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF A I DA + +T II+L Q+L +E++AEGVET+EQA++L G + +QGYL+ Sbjct: 679 IDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESGCNEIQGYLF 738 Query: 499 AQPMPLRDFPKWLAGS 514 ++P+ F + L + Sbjct: 739 SRPVEEAQFNRMLENN 754 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 90/258 (34%), Positives = 137/258 (53%), Gaps = 5/258 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 LA R++ + L + EF L QP + + IG+E L+RW++P +G +PD FI Sbjct: 388 LAANDRLALETSLRHALEREEFTLHYQPRVRTQDDVMIGMEALVRWHHPDKGLTAPDAFI 447 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LI PL +V+ RQ + H+ +N++ R+ L+ ++ Sbjct: 448 PMAEETGLITPLGLWVLRTACRQAQTWMRLYGEPIHMAVNLSMRQLRQPDLVSQIDAILR 507 Query: 379 -SAHPIQQLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + P L LE+TE + EL V+LAIDDFGTG SS ++L+ L D Sbjct: 508 DTGLPASSLELELTESVLMAGDGHTLTALAELKALGVRLAIDDFGTGYSSLAYLKRLPID 567 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + I DA + + IIA+ + L +E+VAEGVET EQ +L++ G QG Sbjct: 568 ALKIDRSFVSDIPHDASDMAIASTIIAMARTLGLEVVAEGVETPEQLAFLKKEGCDSYQG 627 Query: 496 YLYAQPMPLRDFPKWLAG 513 + ++ P+ + WL G Sbjct: 628 FGFSPPVDAQAMTLWLDG 645 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 140/263 (53%), Gaps = 5/263 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A+ + + + ++ ++ QP ++ + IG E L+RW +P +G + P FIP Sbjct: 1085 ASNEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIP 1144 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWF- 378 +AEE LI + +V+ ET Q + + + +N++P F RG + +++ Sbjct: 1145 LAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAE 1204 Query: 379 SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + P +L LE+TE + + I L ++++LAIDDFGTG SS S+L+ D+ Sbjct: 1205 TGFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDI 1264 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKIDKSF I + + IIA+G L +++AEGVET+EQ ++L+ G + QGY Sbjct: 1265 LKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGY 1324 Query: 497 LYAQPMPLRDFPKWLAGSQPPPA 519 L + P+P +F K L + A Sbjct: 1325 LTSPPIPAEEFEKLLKENMARDA 1347 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 84/246 (34%), Positives = 141/246 (57%), Gaps = 5/246 (2%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 + E+ + Q +F L QP +N + + IGVE L+RW +P+ G ISP FIPIAE+ Sbjct: 324 TIEVELRKAIEQKQFTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSG 383 Query: 328 LIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQ 385 LIVP+ +V+ E +Q ++ +S V +N++P F L + F + Sbjct: 384 LIVPIGNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAHTNLASVIKNTLFNTGLDPHL 443 Query: 386 LILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSF 443 L +EITE D+ +A E+ + ++++IDDFGTG SS +L+ + LKID+SF Sbjct: 444 LEIEITESMT-ADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSF 502 Query: 444 TAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 + + ++ T+ II++ + LN+ +VAEG+ET+EQ +L++H H QG+L+++P+P Sbjct: 503 VSELHNNPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLP 562 Query: 504 LRDFPK 509 + Sbjct: 563 PSVLEE 568 >UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=12 Tax=Enterobacteriaceae RepID=B5XY29_KLEP3 Length = 511 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 151/508 (29%), Positives = 234/508 (46%), Gaps = 21/508 (4%) Query: 12 RRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVL 71 RRN I ++ +V LA + + +Q V A A +++ +L A + Sbjct: 6 RRNAWIAFSLALVVFLAGVFVIN-WQLWHSDQATHVAAARQAAKKIAAILDEAHAATATA 64 Query: 72 LPLIGLPCS-VAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 L + CS L +AA +R+I L++DG ++CSS+ G R V L P Sbjct: 65 LNVSRSGCSGQGQFQLGTEAALQPHLRTILLIKDGQVWCSSLPGNR----VLTLHPESLP 120 Query: 131 QPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLT 190 L+L R ++ PVLI T +A ++ + +I L A+ + +A L Sbjct: 121 DEKLQLLPARMMVNKRPVLIYHTRSAQV--RVIVSISDIHLRDALYSDE-----DNAGLA 173 Query: 191 VDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPG--ATALAWHYLPTQLPLA 248 + H + D P SS +PF I + + + L Sbjct: 174 LSVNHQMIAR-YGDVGPLKASPHQDIFSSPDYPFRIIYPESPFFSPSRLFQNGFGLLIFI 232 Query: 249 VLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNN 308 +SLL ++ S + +AQ F QP++N ++ + GVEIL RW N Sbjct: 233 FSVSLLFYFLLRKYLNVYTSEEENLRYAIAQGYIVPFYQPVVNGKTGEIYGVEILARWKN 292 Query: 309 PRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFRR 366 SP FIP+AE LI+PLTR +MA+ Q + + FH+G+N++ SH Sbjct: 293 ATTQRRSPAEFIPLAERTGLIIPLTRSLMAQVAAQMNPIFSKLPDGFHIGLNISVSHINA 352 Query: 367 GVLIKDLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGN 423 I D Y +L+LEITE++ LL D + LH + +A+DDFGTG Sbjct: 353 PSFIDDCLHYQRGFEGKAVKLMLEITEQEPLLLNDAVVDKLNTLHSRGFSIALDDFGTGY 412 Query: 424 SSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAK 483 S S L L D +KID+SF + +A +S + D +I + + L++ ++AEGVETQ Q + Sbjct: 413 SGLSCLHELVFDYIKIDQSFVGRVTGEAPSSKLLDCVIEMARTLSLRIIAEGVETQVQLE 472 Query: 484 YLRRHGVHILQGYLYAQPMPLRDFPKWL 511 YL R +H+LQGY + +PMP L Sbjct: 473 YLNRQNIHLLQGYYFWKPMPYVALVMLL 500 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 5/256 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + A R+ ++ G+ + EF L+ QP + + + VE L+RWN+P +G + P FIP Sbjct: 432 SAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIP 491 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS 379 AEE LI+PL R++M R+ ++ + + V +N++ F L+K++ S Sbjct: 492 RAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEILDALES 551 Query: 380 -AHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P + L LEITE + D + R + +K V +AIDDFGTG SSFS+L+ D Sbjct: 552 SGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLDR 611 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF I + ++ + II LG LN++++AEGVE+Q Q + L+ QG+ Sbjct: 612 LKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQGF 671 Query: 497 LYAQPMPLRDFPKWLA 512 ++P+P + + L Sbjct: 672 FNSRPLPPGELAERLK 687 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 93/253 (36%), Positives = 136/253 (53%), Gaps = 5/253 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 +S ++ L + EF L QP L+ R + GVE LLRW +PR G I+P F+P+ E+ Sbjct: 567 LSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDT 626 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 LIVP+ +V+ Q S + +NV+ FR L++ + Q P Sbjct: 627 GLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQVEQVLREECMPP 686 Query: 384 QQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LEITE A+ DV I L V+LAIDDFGTG SS ++L+ D LKID+ Sbjct: 687 HHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQ 746 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 +F DA + + + I+LG +L +E+VAEGVET EQ +LRR ++QG+ +++P Sbjct: 747 AFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRP 806 Query: 502 MPLRDFPKWLAGS 514 +P +LA Sbjct: 807 LPADALTPFLARH 819 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 140/263 (53%), Gaps = 5/263 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R++ ++ L+ EF L+ QP + S++ IG+E L+RW +P GW+ P FIP+ Sbjct: 702 ATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPL 761 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE +I + R+V+ E RQ+ + + V +N++P ++ + + Sbjct: 762 AEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLSGC 821 Query: 381 -HPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE + DV + R+L + + +IDDFGTG SS +L D L Sbjct: 822 RLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKL 881 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + ++ +T IIAL ++L++++VAEGVET EQ ++L R G QG+ Sbjct: 882 KIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFY 941 Query: 498 YAQPMPLRDFPKWLAGSQPPPAR 520 +++P+P + WL+ R Sbjct: 942 FSRPVPADEIAGWLSREGAVQDR 964 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 92/255 (36%), Positives = 146/255 (57%), Gaps = 7/255 (2%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 + S ++ GL +H+F + QP ++ R Q+ GVE LLRW +P++G +SP FIP+AEE Sbjct: 736 ALSTDLRAGLREHQFLVHYQPQVD-REQRITGVEALLRWKHPQRGMVSPAEFIPVAEETG 794 Query: 328 LIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDL-NQYWFSAHPI 383 LI+PL ++V+ + Q V+ P ++ + +NV+ FR + + + Sbjct: 795 LILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQP 854 Query: 384 QQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE ++ IA+ L V LA+DDFG G SS S+L+ L D LKIDK Sbjct: 855 HNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDK 914 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF A + SD ++ + II+L Q L ++++AEGVET+ Q +L G QG+L+ P Sbjct: 915 SFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPP 974 Query: 502 MPLRDFPKWLAGSQP 516 +P+ +F ++ G+ P Sbjct: 975 LPIAEFEAFMQGAAP 989 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 137/260 (52%), Gaps = 5/260 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R S ++ LA+ EFEL+ QP ++AR+ + G E L+RW++P +G +SP FIP+ Sbjct: 540 MQARRSLELDLRRALARQEFELYFQPQVDARTGRFDGAEALIRWHHPERGLVSPGEFIPL 599 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 AEE LI PL +V+ + + ++ V +N++P FR L + + Sbjct: 600 AEETGLIGPLGEWVLRTACAEARRW--ATPLPVAVNLSPVQFRDPRLAATVRGILAETGL 657 Query: 382 PIQQLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P +L +EITE + D + EL +++++DDFGTG SS S+L D +KI Sbjct: 658 PGSRLEIEITEGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYLRRFPFDKIKI 717 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF D + + I LG+ L I+ AEGVET +Q+ ++ G LQGYLY+ Sbjct: 718 DQSFVRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEGCDQLQGYLYS 777 Query: 500 QPMPLRDFPKWLAGSQPPPA 519 +P+P + + P A Sbjct: 778 RPVPAESIAELFRAPRAPRA 797 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 7/271 (2%) Query: 257 YIAWLATAYR--MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 Y A L R ++ ++ L + EF L QP + S + +G E L+RWN+P G + Sbjct: 666 YTADLNARAREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLL 725 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKD 372 P FI +AEE IV + +V+AE RQ + + + + IN++ FR+ L Sbjct: 726 GPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQ 785 Query: 373 LNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWL 429 + Q S P L +E+TE + D I + ++L+IDDFGTG SS S+L Sbjct: 786 VKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYL 845 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + + D LKID+SF I DA +S + II + + LN+++VAEGVET EQ ++L + G Sbjct: 846 KRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEG 905 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGSQPPPAR 520 +QGYL A+P+P DF + L P Sbjct: 906 CDFVQGYLIAKPLPADDFAELLHKDSLLPQS 936 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 93/271 (34%), Positives = 141/271 (52%), Gaps = 7/271 (2%) Query: 257 YIAWLATAYR--MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 Y A L R + ++ L + EF L QP ++ ++ + IG E L+RW +P G + Sbjct: 668 YTADLNARAREILEIESQLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLL 727 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVG--INVAPSHFRRGVLIKD 372 P FI +AEE IV + +V+ E RQ + + +N++ FR+ L Sbjct: 728 GPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVH 787 Query: 373 LNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWL 429 L + L +E+TE + DV+ I + ++L+IDDFGTG SS S+L Sbjct: 788 LQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYL 847 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + + D LKID+SF I DA +S + II + + LN+ ++AEGVET EQ K+L R G Sbjct: 848 KRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREG 907 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGSQPPPAR 520 H QGYL A+P+P ++F + L P R Sbjct: 908 CHAAQGYLLAKPVPAKEFERLLEKGVLLPER 938 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 76/247 (30%), Positives = 132/247 (53%), Gaps = 4/247 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + R++ + + E ++ QP ++ S + IGVE L+RWN+P +G +SP VFIPIAEE Sbjct: 556 IEIERDLRKAIERKELVVYYQPQFHSESNRMIGVEALVRWNHPTKGMLSPGVFIPIAEET 615 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSA-HPI 383 LI + +V+ E RQ + V +N++ F + L++ + Sbjct: 616 GLIYEIGTWVLREACRQMKQWHDKGGPLIPVSVNLSSHQFHQRNLVQYIKNILEETKLAP 675 Query: 384 QQLILEITERDALLD-VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 L LEITE + V I EL++ ++++DDFGTG SS S+L+ LKID+S Sbjct: 676 HFLELEITESMMMDPAVSISILHELNKIGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRS 735 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F + + + + II++ + L ++++AEG+ET++Q L + +QGY Y++P+ Sbjct: 736 FITDLSRNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPL 795 Query: 503 PLRDFPK 509 + + Sbjct: 796 SANEVEQ 802 >UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='Nostoc azollae' 0708 RepID=B9YGE9_ANAAZ Length = 637 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 89/255 (34%), Positives = 135/255 (52%), Gaps = 6/255 (2%) Query: 269 FSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHL 328 + L + EF+++ QP +N+ + + +E LLRW +P G I P FIPIAEE L Sbjct: 374 LENSLYNALERQEFKVYYQPQVNSSTGEITKMEALLRWQHPELGLIPPATFIPIAEETGL 433 Query: 329 IVPLTRYVMAETIRQRHVFPMS---SQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQ 385 I+P++ +V+ Q + + S V +N + F++ L+ + Q + Sbjct: 434 ILPISEWVLKTACLQNKAWQQTLNLSSLSVAVNFSGRQFQQPNLVGIVEQVLCETKLAHR 493 Query: 386 -LILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 L LEITE A+ DV+ I R+L V ++IDDFGTG SS S+L+ LKID+S Sbjct: 494 YLELEITETVAMQDVELTQKILRQLDEMGVTISIDDFGTGYSSLSYLKDFSIHALKIDQS 553 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F + + + +T II+L LN+ +VAEGVETQEQ LR I+QGY ++ P+ Sbjct: 554 FVQDLANKDHQTAITTAIISLAHGLNLSVVAEGVETQEQLNALRILQCEIMQGYFFSHPL 613 Query: 503 PLRDFPKWLAGSQPP 517 + + L QP Sbjct: 614 SAEEATRMLTAYQPH 628 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 94/258 (36%), Positives = 138/258 (53%), Gaps = 4/258 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R S RE+ L ++EFELF QP ++ + C+G E L+RW +P +G I PD FIP+AE Sbjct: 601 RRFSMERELRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQFIPVAE 660 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQ-YWFSAH 381 LIVP+ +V+ + + + +NV+ F RG LI+ L S Sbjct: 661 STGLIVPMGAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTLESSMRESGV 720 Query: 382 PIQQLILEITERDALLDV-DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 + L +E+TE + REL R + ++IDDFGTG SS S+L+ L LKID Sbjct: 721 DSRLLEIEVTESVLMQHPMASDTLRELSRMGILISIDDFGTGYSSLSYLKKLPVYKLKID 780 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF + D +T I+ +G L ++ +AEGVE++EQ LRR G +QGY Y++ Sbjct: 781 RSFVTTLPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGCDEIQGYYYSR 840 Query: 501 PMPLRDFPKWLAGSQPPP 518 P+P F W+ PP Sbjct: 841 PLPNDTFMTWVREKSTPP 858 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 144/261 (55%), Gaps = 5/261 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 R++ E++ L ++E ++ QP+++ ++QQ VE L+RW +P +G +SP FIPIA Sbjct: 305 QERLALENELHGALQRNEIVVYYQPIIDLQTQQITAVEALVRWQHPTRGLVSPAKFIPIA 364 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SA 380 E + LIV + +V+ Q + ++ + +N++ F L++ + + S Sbjct: 365 EANGLIVEIGEWVLRTACLQNRAWQLAGLPPIRMSVNLSARQFEESNLVELVGEIIQESG 424 Query: 381 HPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LE+TE + D+ I ++L V LA+DDFGTG SS ++L+ ++LK Sbjct: 425 LHPSYLELEVTESSLMADIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLK 484 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + S+ ++ VT+ IIAL + L +++ AEG+ETQ+Q YL++ G QGY + Sbjct: 485 IDRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYF 544 Query: 499 AQPMPLRDFPKWLAGSQPPPA 519 P P + + L + A Sbjct: 545 GIPAPANEITEILQPEEAKEA 565 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 155/304 (50%), Gaps = 13/304 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLG 276 +I V+ A W L + LA+ ++ ++ I Sbjct: 245 SIGVSVFPDDATDWTTLLSFADLALEIAKENGGNTYCFYTNELKKTNEEKLYIQHSIRKA 304 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L Q+EF L QP+++ ++ + VE LLRW +P++GWISP FIPIAEE +LI P+ +V Sbjct: 305 LKQNEFTLHYQPIVDIQTGDIVAVEALLRWFHPKRGWISPATFIPIAEETNLIQPIGDWV 364 Query: 337 MAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA-HPIQQLILEITER 393 + Q + +G+NV+ F + L+K + + L LEITE Sbjct: 365 LRNVCEQSKKWKEKGLPHVQIGVNVSIKQFLQADLVKHIEHVLRTYDLDPFCLKLEITES 424 Query: 394 DALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 A+ +DY +A+ L ++LA+DDFGTG SS ++L+ L D++KID+SF + + Sbjct: 425 MAMHHIDYVLAQLQSLKHLGLQLAVDDFGTGYSSLNYLKKLPVDIIKIDRSFVQDMVKHS 484 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 + ++ +I + L +++VAEGVET+EQ L+R G QGY +++P+ F + + Sbjct: 485 YDLSIVRAVIQVAHSLQMKVVAEGVETEEQLAILKREGCDRAQGYYFSKPLAAEQFEQLV 544 Query: 512 AGSQ 515 + Sbjct: 545 QQKK 548 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 79/254 (31%), Positives = 130/254 (51%), Gaps = 5/254 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ L ++ L QP + ++ +GVE L+RWN+P +G +SP FIP+AEE Sbjct: 700 LRMEADLKHALENNQLHLHYQPQFDLKNAGLVGVEALIRWNHPTEGPVSPGEFIPLAEET 759 Query: 327 HLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPI 383 LI PL R+V+ E RQ + + V +NV+ ++ + L + Sbjct: 760 GLIHPLGRWVLREACRQAKFWQNNFARIVPVAVNVSSLQLKKNNFVHVLEECLNEFQIDP 819 Query: 384 QQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 Q + LEITE + ++ + + LAIDDFGTG SS S+L+ LKID+ Sbjct: 820 QLIELEITESAVMDRLEKSMELLNAIKGLGFNLAIDDFGTGYSSLSYLKKFPFSKLKIDR 879 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + +D ++ + II++ L ++ +AEGVET EQ +L HG +QG+L ++P Sbjct: 880 SFVMDLETDENDAAIITAIISMATSLGLKTIAEGVETVEQKHFLTDHGCDEVQGFLLSRP 939 Query: 502 MPLRDFPKWLAGSQ 515 + + S+ Sbjct: 940 LSADAIEEMYLSSK 953 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 86/253 (33%), Positives = 138/253 (54%), Gaps = 7/253 (2%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 ++ + E+ + L++ E LF QP +N + +GVE LLRWN+P++G I P+ FIP+AE Sbjct: 333 HKTTMEHELRMALSKEELILFYQPQVNLE-GKIVGVEALLRWNHPQKGLIPPNTFIPLAE 391 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPM---SSQFHVGINVAPSHFRRGVLIKDL-NQYWFSA 380 E LI+P+ +V+ +Q + H+ INV+ F+ + + N S Sbjct: 392 ETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEASFYETVANAIALSG 451 Query: 381 HPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 + LE+TE L + IA+ L V ++DDFGTG SS S+L+ L D LK Sbjct: 452 SDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSSLSYLKRLPLDELK 511 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF IG D ++ + II + +++++AEGVE +EQ +L +G + QGYL+ Sbjct: 512 IDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFLMENGCGLFQGYLF 571 Query: 499 AQPMPLRDFPKWL 511 +PMP + + Sbjct: 572 GKPMPPEELERLF 584 >UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU Length = 501 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 140/494 (28%), Positives = 226/494 (45%), Gaps = 23/494 (4%) Query: 19 CTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLP 78 L+ L +S + + + AN V ++ ++ L+ +E L Sbjct: 4 ALAIILLPLPIVISAAYRAGMESVDSNLTNMANSYVSRIEVIINELRNENEKAL-YNPRN 62 Query: 79 CSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTI 138 C L +R + +V DGT+ CSS G + + P ++ + Sbjct: 63 CEKLQDDL----LFESILREMLIVNDGTITCSSKRGELSRDISRYY-----PNGQIKSNV 113 Query: 139 DRALIKGSPV---LIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRH 195 ++G P L+ A + GV+ ++ + + L +I + + Sbjct: 114 VLFDLEGDPAKRTLLVIDADAHDTTHGVISVVEKNYIAGRLGYHTDNRIKKLAFKLHDTT 173 Query: 196 LLYGNGLVDSLPQPEDNENYQVSSQRFPF--TINVNGPGATALAWHYLPTQLPLAVLLSL 253 Y N + S R+ F + + P T YL LP++ +S+ Sbjct: 174 YPYNASF------NTVNRSVVAKSDRYSFLLMLEASDPYVTERLTFYLLGALPVSFAISV 227 Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 L+ + + R S ++ GL + E + QP++ + + G E L+RW NP+ G+ Sbjct: 228 LITILLFFFGG-RSSLVDDLRKGLERRELFMAYQPVVRSEPCEIKGFEALVRWVNPKLGF 286 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDL 373 + PD FIPIAEE LI LT YV+ +R + H+G+N+ PS+ V ++ L Sbjct: 287 VGPDNFIPIAEEFGLINKLTDYVLDSVLRDWSKAKLMECHHMGVNIPPSYLLDPVCVEKL 346 Query: 374 NQYWFSAHPIQ-QLILEITERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETL 432 QY + I QLI EITER L + ++ EL + +AIDDFGTG ++ S L+ + Sbjct: 347 KQYAKAYKDINLQLIAEITERQLLDEQGQQVLHELRNSGILVAIDDFGTGRTALSVLQNI 406 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D LKIDK F IG ++VN+ V + II L +L +E+VAEGVET+ Q+ YL+ GV Sbjct: 407 EFDFLKIDKCFVDTIGVESVNAPVLNAIIDLSHQLQVEIVAEGVETKVQSCYLKEKGVQY 466 Query: 493 LQGYLYAQPMPLRD 506 QGY YA+P+ D Sbjct: 467 QQGYYYAKPLSFSD 480 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 141/258 (54%), Gaps = 7/258 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A + R +++L L Q +F L QP ++A+ ++ VE LLRW +P G + P F+P Sbjct: 1140 AASDRRQLEEDLHLALQQKQFVLHYQPQVDAQ-RRVFAVEALLRWQHPHHGLVPPARFVP 1198 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AE+ LIVP+ ++V+ Q + + + V +NV+ FR+ ++ L Q Sbjct: 1199 LAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQPDFVELLRQAID 1258 Query: 379 -SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 S +L LE+TE L +V I + V ++DDFGTG SS S+L L D Sbjct: 1259 NSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLD 1318 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID++F + + ++ + I+ +G+ L +++VAEGVET+ Q ++L HG QG Sbjct: 1319 QLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQG 1378 Query: 496 YLYAQPMPLRDFPKWLAG 513 +L+++P+ + F +L G Sbjct: 1379 FLFSRPLAVDAFEDFLQG 1396 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 90/256 (35%), Positives = 139/256 (54%), Gaps = 5/256 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T ++ ++ LA+ EFE+ QP ++ S Q +G E L+RW +P +G P FI I Sbjct: 392 TYRQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRWRHPEKGLQPPANFIAI 451 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AEE +I L +V+ + + + IN++ FR+ L++ S Sbjct: 452 AEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQFRQSDLVEQCRNTIRSA 511 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + LE+TE + D+D + R+L+ V+LAIDDFGTG SS + L+ D L Sbjct: 512 GIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLKHFPIDTL 571 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KIDKSF I D + + I+AL + L +E+VAEGVET+EQ +L+R G I+QGY Sbjct: 572 KIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQGYF 631 Query: 498 YAQPMPLRDFPKWLAG 513 +++P+P F ++L G Sbjct: 632 FSRPLPFEGFREYLKG 647 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 85/239 (35%), Positives = 134/239 (56%), Gaps = 7/239 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + + L Q +F L+ QP ++ S + +G+E LLRW++P QG I+PD FIP+AE+ Sbjct: 312 LELETSLRQALGQKQFRLYYQPQIDIVSGRVLGLEALLRWHHPTQGMIAPDRFIPLAEKT 371 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQ 385 LI+P+ +V+ E Q V +N++ F + L+ + + + P Sbjct: 372 GLIIPIGEWVLREACSQVAT---QHGLKVAVNLSARQFHQKDLVAMIRRILDETGMPPVN 428 Query: 386 LILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSF 443 L LEITE + DV+ I +L+ V +++DDFGTG SS S+L+ D+LKIDKSF Sbjct: 429 LELEITESALIYDVELAIATMEQLNDLGVSVSLDDFGTGYSSLSYLKRFPIDMLKIDKSF 488 Query: 444 TAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 + +D ++ + II + L ++++AEGVET+ Q LR HG QGYL A+P+ Sbjct: 489 IDEVTTDPDSNVIVKTIIVMAHSLGLKVIAEGVETK-QLTMLREHGCDQAQGYLIARPL 546 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 87/254 (34%), Positives = 136/254 (53%), Gaps = 5/254 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ E+ ++Q+ L QP ++ + Q IG E L+R N+P +G ISP FI +AEE Sbjct: 886 LTMGAELRNAISQNRLVLHYQPQVDIITGQIIGAEALIRINHPERGIISPGEFISVAEET 945 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 LI+P+ +V+ E RQ + + + + IN++P + L + ++ S Sbjct: 946 GLIIPMGTWVIREACRQMQQWHLDKNIELTIAINLSPLQLHQSDLPEIVSLALHDSGLNA 1005 Query: 384 QQLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LE TE + +V I + + L+IDDFGTG SS S+L+ D LKID+ Sbjct: 1006 RYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQ 1065 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + I D ++ + IIALG+ L + +AEGVET+ Q YLR +QGYLY+ P Sbjct: 1066 SFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLYSAP 1125 Query: 502 MPLRDFPKWLAGSQ 515 +P +F L + Sbjct: 1126 LPAEEFAALLVRGK 1139 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 84/252 (33%), Positives = 129/252 (51%), Gaps = 4/252 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + + L + EF L QP +A++ + GVE L+RW+N G ISP FIP+AEE Sbjct: 561 LKLESLLYKALERDEFLLHYQPQYDAKTNRISGVEALIRWDNEELGMISPADFIPLAEET 620 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 LIVP+ +VM Q + + +N++ F + L + + + S Sbjct: 621 GLIVPIGEWVMRTACHQNKAWQDEGLPPMVMSVNLSIRQFYQPDLPQVIGKILEESGMAP 680 Query: 384 QQLILEITERDALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 + L LEITE A+ D I ++L + V++AIDDFGTG SS + L+ D LKID+S Sbjct: 681 ELLELEITESMAMHADSAISILKQLKQLGVRIAIDDFGTGFSSLNHLKKFPLDHLKIDRS 740 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F I + + II L LN+ +VAEGVE Q ++L+ H + QG+ +++P+ Sbjct: 741 FVDDICLGSEEQDIVKTIIMLAHNLNLRVVAEGVENDLQQQFLKDHRCDVFQGFHFSKPV 800 Query: 503 PLRDFPKWLAGS 514 P+ L Sbjct: 801 IRDAIPELLRKQ 812 >UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W3W9_9CYAN Length = 560 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 82/257 (31%), Positives = 136/257 (52%), Gaps = 5/257 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ L + EF+L+ QP +N + Q G E L+RWN+P++G ISP FIP+AE+ Sbjct: 300 FELEIQMRQALERQEFQLYYQPKVNLLTGQIEGAEALVRWNHPQRGIISPVEFIPLAEKT 359 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 LIVPL +V+ + Q V+ + +N++P F + L + + Sbjct: 360 GLIVPLGEWVLRQACHQARVWQDQGIYPLRIAVNLSPRQFNQSNLTNFVVDILHETGLNP 419 Query: 384 QQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE + + + IA + ++++IDDFGTG S+ S L+ DVLKID+ Sbjct: 420 HYLELELTESTLVQNPESAIATLQTFKALGIRISIDDFGTGYSALSQLKKFPFDVLKIDR 479 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + D+ + +T I+ + + L +++VAEGVET Q +L+ H +QGY ++ P Sbjct: 480 SFVCQLTEDSRDEAITTAILQMARSLKLKVVAEGVETLSQLNFLKGHQCDEIQGYWFSPP 539 Query: 502 MPLRDFPKWLAGSQPPP 518 + F L+ + P Sbjct: 540 LSAEAFADLLSTGKKFP 556 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 91/263 (34%), Positives = 143/263 (54%), Gaps = 5/263 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R+S R + + ++ L QP ++ + + G+E L+RWN+P QG +SP FIPIAE Sbjct: 1009 RRLSLERALRQAVECNQLTLHYQPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAE 1068 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQ-YWFSAH 381 E LI+ + +VM + SS V IN++ F+ +L+ L + S Sbjct: 1069 ETGLIITIGEWVMQQACMDAKRLARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGL 1128 Query: 382 PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L +EITE A+ DV+ I + EL VK++IDDFGTG SS S+L+ L + LKI Sbjct: 1129 APELLEVEITESLAMGDVNRTIEQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKI 1188 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 DKSF + D+ ++ + I+++ L + +VAEGVE Q Q +L +QGY ++ Sbjct: 1189 DKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFS 1248 Query: 500 QPMPLRDFPKWLAGSQPPPARHN 522 +P+P F K+L P +H+ Sbjct: 1249 KPLPFEAFEKFLLDWDPVKMKHS 1271 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 5/256 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T R + + + EF L QP ++ + + + +E L+RW +P G + P FIP+ Sbjct: 363 TIERHKLEVGLRRAVRKKEFFLVYQPQVDLGTGRIVALEALVRWQHPEAGVLLPSTFIPV 422 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LI + +++ Q + + +N + FR+ L++ + Q S Sbjct: 423 AEETGLIHIMGEWILRTACHQAMQWQRMGLPPMRIAVNFSARQFRQPDLVERIEQILLES 482 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L LEITE + +++ I +L + +++AIDDFGTG SS ++L+ D L Sbjct: 483 GLPPHHLELEITESVFMENLESAIETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRL 542 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KI + F I D ++T+ + I+A+ RL I+++AEGVET EQ +LRR G H +QG+ Sbjct: 543 KIAQDFVRDIPDDEDDATIIETIMAMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFY 602 Query: 498 YAQPMPLRDFPKWLAG 513 +A+PM + +L Sbjct: 603 FARPMQAEEIAGFLNQ 618 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 5/257 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 +++ ++ L + EF L+ QP + + + +G+E L+RW +P G++ PD FIP+ Sbjct: 604 ALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIPL 663 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LI P+ ++V+ Q + + +N++ F + LI + Q + Sbjct: 664 AEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLETT 723 Query: 381 H-PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L LEITE A+ DV++ I +EL + + IDDFGTG SS + L+ + L Sbjct: 724 EIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNTL 783 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I ++ ++ + I+AL Q L +++VAEGVET +Q +LR + QGY Sbjct: 784 KIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGYY 843 Query: 498 YAQPMPLRDFPKWLAGS 514 + P+P + K L S Sbjct: 844 FCPPVPAIEIAKLLRQS 860 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 92/254 (36%), Positives = 136/254 (53%), Gaps = 7/254 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R + L + EF L Q +++ S + IG E LLRWNN + G +SP FIP+AEE Sbjct: 789 RGQLETALRGALERKEFLLHYQLQMDS-SGRPIGAEALLRWNNAKLGSVSPVQFIPVAEE 847 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFH---VGINVAPSHFRRGVLIKDLNQYWF-SAH 381 LI+P+ +V+ Q + +F+ + +NV+ FR + + S Sbjct: 848 SGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGI 907 Query: 382 PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 L LE+TE L D++ I + L VK ++DDFGTG SS S+L L D LKI Sbjct: 908 QPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKI 967 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I +D ++ + II++ L +E++AEGVET+EQ ++L G QGYLYA Sbjct: 968 DQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYA 1027 Query: 500 QPMPLRDFPKWLAG 513 +PMP+ + LA Sbjct: 1028 KPMPIEELEIKLAQ 1041 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 91/250 (36%), Positives = 145/250 (58%), Gaps = 7/250 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R ++ G+A+HE + QP+++ + + G E L+RW +P +G ISP FIP+AEE Sbjct: 851 RSQLESDLRQGIARHELTVHLQPIVDGST-RLCGAEALVRWRHPVKGLISPADFIPLAEE 909 Query: 326 HHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 LI+PL R V+ Q + P ++ F + +NV+ FR+ + ++ + Sbjct: 910 TGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNVSARQFRQPDFVAEVLGTLAGTGA 969 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 Q+L LE+TE L DV+ I +L R V A+DDFGTG SS S+L+ L D++KI Sbjct: 970 NPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYLKRLPLDLVKI 1029 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + +D ++ + I+AL + L++++VAEGVET Q +L+ HG QGYL+ Sbjct: 1030 DQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFG 1089 Query: 500 QPMPLRDFPK 509 +P+PL F + Sbjct: 1090 RPVPLEAFER 1099 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 149/258 (57%), Gaps = 7/258 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R + ++ GLA+ E ++ QP+++ R+ + +GVE L+RW +P +G ISP FIP Sbjct: 572 AVNARSNLEADLRQGLARGELCVYYQPVVDHRA-RLLGVEALVRWRHPVRGMISPADFIP 630 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AE+ LI+PL + V+ Q + + V +NV+ FR+ + ++ Q Sbjct: 631 LAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQ 690 Query: 379 S-AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 ++L LE+TE L DV+ IAR +L R+ V A+DDFGTG SS S+L+ L D Sbjct: 691 GCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLD 750 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+ F + +D ++ + I+AL Q L++E+VAEGVET Q +LR HG QG Sbjct: 751 QVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQG 810 Query: 496 YLYAQPMPLRDFPKWLAG 513 YL+ +P P+ D +L+ Sbjct: 811 YLFGRPGPVEDIDAYLSH 828 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 92/265 (34%), Positives = 142/265 (53%), Gaps = 8/265 (3%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 M + L L + EF L+ QP ++ S + G E L+RW +PR+G ++P FIP+AEE Sbjct: 447 MEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEET 506 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 LIVP+ +V+ E RQ + +V +N++ FR G L + + + Sbjct: 507 GLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDP 566 Query: 384 QQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE + D + EL V+L++DDFGTG SSF+ L + LKID+ Sbjct: 567 HLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDR 626 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF I +D ++T+ IIA+ R+ ++ +AEGVET+ Q YLR+ G +QGYL ++P Sbjct: 627 SFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRP 686 Query: 502 MPLRDFPKWL---AGSQPPPARHNG 523 +P ++ + AG A G Sbjct: 687 LPASEYAALVRRDAGFSCLSAAEQG 711 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 133/260 (51%), Gaps = 5/260 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + R+S ++ L E L QP ++ R IG+E L+RW +P++G I+P FIP+ Sbjct: 558 SGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPM 617 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AE + LI+P+ +V+ R V IN++ ++ + + Sbjct: 618 AECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAI 677 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE + +V+ + +L++ ++L++DDFGTG SS ++L+ D L Sbjct: 678 GLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRL 737 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF SD ++ + IIAL L I+++AEGVE E +L+++G QGY Sbjct: 738 KIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYF 797 Query: 498 YAQPMPLRDFPKWLAGSQPP 517 ++P+ D +L + P Sbjct: 798 ISRPLTFDDLRMFLLTGKNP 817 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 5/254 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 A R++ R++ +A++E L QP A GVE LLRW++P G ISP FIP+ Sbjct: 567 AAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPV 626 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE +IV + +V+A + + + + +NV+ RR + + S Sbjct: 627 AEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVANALTTS 686 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P + L LEITE + + I L R V LAIDDFGTG SS ++L+ D L Sbjct: 687 GLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHL 746 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF A I D + + IAL L + ++AEGVET++Q + LR +G +QG+L Sbjct: 747 KIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFL 806 Query: 498 YAQPMPLRDFPKWL 511 +++P+ +L Sbjct: 807 FSKPLTGAAAFAFL 820 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 84/253 (33%), Positives = 133/253 (52%), Gaps = 5/253 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + +++ L + E L QP ++ +S + +G E L+RW +P +G +SP FIP+AEE Sbjct: 548 LELEKDLRQALERGELLLHYQPKVSLQSGKIVGCEALIRWQHPLRGLVSPADFIPLAEET 607 Query: 327 HLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 LIVP+ +V+ + +Q + + +N++ FR G L ++ + Sbjct: 608 GLIVPIGTWVLEQACQQAISWQQQQLPTITMAVNLSSRQFRHGNLCDVVDTILETTTLHP 667 Query: 384 QQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LEITE + D + + L + V L++DDFGTG SS ++L D LKID Sbjct: 668 DLLDLEITESMIMDDPEGAVQTMIALKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDA 727 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + D+ ++ V I+ + L + VAEGVET EQ +L + ILQGYLY++P Sbjct: 728 SFIRDVAQDSSSAAVAVSIVDIAHHLGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRP 787 Query: 502 MPLRDFPKWLAGS 514 +P DF L + Sbjct: 788 LPAEDFTSLLRSN 800 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 139/255 (54%), Gaps = 5/255 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 ++ ++ + ++EF L QP ++ +++ IGVE L+RW +P G +SP +FIP+AEE Sbjct: 589 KLILEADLRKAIERNEFVLHYQPQIDLNTRKLIGVEALIRWQHPSLGMVSPALFIPLAEE 648 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHP 382 LI PL +V+ Q ++ + + + +N++ ++ ++ + + Sbjct: 649 TGLICPLGEWVLRTACHQYRIWQKAGFPKIQMAVNLSAFQLQQDDIVARIAMILKETGMT 708 Query: 383 IQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L LEITE + +++ I +L + +K+AIDDFGTG SS + L+ L D LKID Sbjct: 709 PSDLELEITETTVMENLEQMTAILEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVDTLKID 768 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 KSF I D+ ++ + II LG+ ++++AEGVET Q ++LR QGYL ++ Sbjct: 769 KSFVQDITLDSNDAKLCQGIIMLGKAFELDVLAEGVETFTQLEFLRSLNCDRAQGYLISR 828 Query: 501 PMPLRDFPKWLAGSQ 515 P+ + L +Q Sbjct: 829 PLAPDALIELLLKAQ 843 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 139/260 (53%), Gaps = 5/260 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + A R+ ++ L+++E L QP ++ S + IG E LLRW +P G +SP FI Sbjct: 736 VRMAERLRLESDLRWALSRNELLLHYQPQVDINSGEIIGFESLLRWQHPELGMVSPVNFI 795 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LI+P+ +V+ E RQ + + V +N++ F ++ ++Q Sbjct: 796 PLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKVVAVNLSAVQFHGADIVALVSQSLQ 855 Query: 379 -SAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 S + L LEITE + D + RI EL V L+IDDFGTG SS S+L+ D Sbjct: 856 NSGLEARYLELEITESVIIEDPERVIRIMDELKMLGVGLSIDDFGTGYSSLSYLKRFPID 915 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+SF + + ++ + ++I + + L +++AEGVET EQ ++LR H QG Sbjct: 916 KIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVIAEGVETVEQLEFLRSHHCDEYQG 975 Query: 496 YLYAQPMPLRDFPKWLAGSQ 515 + + +P + P +A Q Sbjct: 976 FYCSPGVPAGEIPDLVASRQ 995 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 90/251 (35%), Positives = 134/251 (53%), Gaps = 5/251 (1%) Query: 270 SREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLI 329 +I GL + EF LF QP ++A +GVE L+RW +P+QG +SP FIP+AEE LI Sbjct: 715 EGDIRKGLERGEFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLI 774 Query: 330 VPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQL 386 VP+ +V+ RQ + S V +NV+ + + + +L Sbjct: 775 VPIGEWVLTAACRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRL 834 Query: 387 ILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFT 444 LE+TE + RI L V +IDDFGTG SS S+++ LKID+SF Sbjct: 835 ELELTESILMDPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFV 894 Query: 445 AAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPL 504 + DA ++ +T II++ + LN+E+VAEGVET+EQ +L+R LQGYL++ P+P Sbjct: 895 HGLPQDADDAGITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPP 954 Query: 505 RDFPKWLAGSQ 515 + L + Sbjct: 955 DEMEAILRRGR 965 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 130/256 (50%), Gaps = 6/256 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ ++ L + EF L QP + + + IG E L+RW +P +G +SP FI + Sbjct: 790 AQERLELELDLRKALERDEFVLHYQPQFD-PNGRIIGCEALIRWQHPDKGLLSPGEFINM 848 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFRRGVLIKDL-NQYWFS 379 AE LIVP+ ++V+ Q ++ ++ +N++ F L++ + N S Sbjct: 849 AEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTS 908 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE +++V+ I + + ++IDDFGTG SS S L+ + L Sbjct: 909 GITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKL 968 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + D + + II + LN+ ++AEGVET EQ ++L+ QGY Sbjct: 969 KIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYY 1028 Query: 498 YAQPMPLRDFPKWLAG 513 +++P+ D ++L Sbjct: 1029 FSRPILAADIEQYLQA 1044 >UniRef50_A8VZA5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=2 Tax=cellular organisms RepID=A8VZA5_9BACI Length = 579 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 4/261 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 L +++ + ++ + F+L QP + + IG E L+RW + G++ PD Sbjct: 315 IHLYYNNQLTLEKRLHKAVENRGFQLHYQPQYDLAHDRVIGFEALIRWQDDHLGFVPPDR 374 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW 377 FIP AEE LI+P+ V+ E R + VG+N++P F+ I + Q Sbjct: 375 FIPTAEETGLIIPIGHIVLEEACRMGKSWLDHGLDLRVGVNISPVQFQHPDFIHSVRQTL 434 Query: 378 F-SAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 + P +QL +EITE L + D +L R V ++IDDFGTG SS S+L T Sbjct: 435 AQTGLPAKQLDIEITENVLLYNRDECLNTLDQLKRLGVHISIDDFGTGFSSLSYLRTFPV 494 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 DVLKID+SF + ++ + + II L + ++++AEGVET + +L +Q Sbjct: 495 DVLKIDQSFVRDVSNNHNDQAIVTSIIQLAHNMGMKVIAEGVETDDSLHFLIDRECDQMQ 554 Query: 495 GYLYAQPMPLRDFPKWLAGSQ 515 GY+Y++P+P +LAG++ Sbjct: 555 GYIYSKPIPPEQISSFLAGNK 575 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 136/258 (52%), Gaps = 5/258 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R + ++ LA+ +FE++ Q ++ + + IG E L+RW +P G +SP FIP+ Sbjct: 722 AVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPL 781 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS-QF-HVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LI+P+ +V+ ++ Q + V +NV+ +R + Sbjct: 782 AEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVET 841 Query: 381 HPIQQL-ILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LEITE + + +Y I + V+LAIDDFGTG SS S L+ L D + Sbjct: 842 DCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKI 901 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +++ ++ + I A+ Q L ++AEGVET++QA +L++ G QGYL Sbjct: 902 KIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYL 961 Query: 498 YAQPMPLRDFPKWLAGSQ 515 Y++P+ +F L Q Sbjct: 962 YSRPVTASEFTALLRAEQ 979 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 92/261 (35%), Positives = 138/261 (52%), Gaps = 5/261 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T R+ + + L +HEFEL QP L+A + G E LLRW +P+ G + P FI + Sbjct: 532 TFERLLLENGLRMALERHEFELHYQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIAL 591 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LI P+ +V+ E RQ + + +N++P F + L + +A Sbjct: 592 AEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAA 651 Query: 381 HPIQ-QLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 +L LEITE + + EL V L+IDDFGTG SS S L+ D L Sbjct: 652 GLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTL 711 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + D N+ + + I+A+ ++L ++VAEGVE++EQA +L G H+LQGY Sbjct: 712 KIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYH 771 Query: 498 YAQPMPLRDFPKWLAGSQPPP 518 + +P+P +F AG + Sbjct: 772 FGRPLPAGEFAALAAGWRREA 792 >UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n=2 Tax=Clostridium RepID=A0PXI0_CLONN Length = 591 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 85/258 (32%), Positives = 141/258 (54%), Gaps = 6/258 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + + ++F L QP ++ S +GVE L+RWN+P+ G + PD FIP+ Sbjct: 328 AYKRIEMIALLKHAVENNQFVLHYQPQVSLESGSVMGVEALIRWNHPKLGLVYPDKFIPL 387 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKD-LNQYWFS 379 AE+ LI+P+ +V+ E RQ ++ S + V +N++ F + L+ ++ S Sbjct: 388 AEKTGLIIPMGEWVIREACRQNKIWHDSGFEELVVSVNLSALQFEKEDLVDVIVDALKTS 447 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L +EITE +++ D I +L VK+AIDDFGTG SS S+L+ D L Sbjct: 448 GLDPKFLEVEITEGILMVNTDKAIQTLNDLKEIGVKIAIDDFGTGYSSLSYLKEFPIDRL 507 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I + N + +III L + L++ +VAEG ET + K+L+ +QGY Sbjct: 508 KIDRSFIMGIPKE-DNGAIANIIIELAKSLHLNVVAEGTETLDHIKFLKVRKCDTIQGYY 566 Query: 498 YAQPMPLRDFPKWLAGSQ 515 +++P+ F + L ++ Sbjct: 567 FSKPVSGEGFTEILRDNK 584 >UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=cellular organisms RepID=A4XXL0_PSEMY Length = 711 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 90/265 (33%), Positives = 146/265 (55%), Gaps = 5/265 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R +++ LA ++ L QP ++ R + +GVE LLRW +P+ G+++PD+FIP+ Sbjct: 443 MRRRRELEKDLRDALALNQLHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVAPDLFIPL 502 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AE++ I+P+ +++ +T RQ + + IN++ L + +N Sbjct: 503 AEQNGTIIPIGEWILDQTCRQLREWHDQGFTDLRMAINLSTVQLHHAELPRVVNNLMQVY 562 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P + L LE+TE + D+ L R +AIDDFGTG SS S+L++L D + Sbjct: 563 RLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKI 622 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KIDKSF + D ++T+ II LG+ L ++++AEGVET EQ Y+ G H QGYL Sbjct: 623 KIDKSFVQDLLEDEDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAQGCHEGQGYL 682 Query: 498 YAQPMPLRDFPKWLAGSQPPPARHN 522 Y++P+P R+ +L ++ A N Sbjct: 683 YSKPLPARELTLFLKQARRLSAAAN 707 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 86/254 (33%), Positives = 140/254 (55%), Gaps = 5/254 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ +A++E ++ QP + SQQ G+E L+RW +P++G ISP FIP+AEE Sbjct: 511 FELENDLRKAVARNELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPADFIPLAEET 570 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 LIV + +V+ + +Q ++ V +N++P FR L++++ + + Sbjct: 571 GLIVSIGEWVLRQACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAKTLKETGINP 630 Query: 384 QQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE + +D A EL LAIDDFGTG SS S+L LKIDK Sbjct: 631 ACLELEVTESMIMDSIDKSTATMIELTELGAGLAIDDFGTGYSSLSYLRYFPLTKLKIDK 690 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + SD ++ + +IAL LN+++VAEG+E ++Q ++L + H QG+L+++P Sbjct: 691 SFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQGFLFSRP 750 Query: 502 MPLRDFPKWLAGSQ 515 +P D + L Q Sbjct: 751 VPAEDMEQLLRQIQ 764 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 82/257 (31%), Positives = 132/257 (51%), Gaps = 5/257 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ + L + E L QP L + +G+E L+RWN+P G ISP FIPIAE+ Sbjct: 609 RLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAED 668 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWF-SAHP 382 LIV + +V+A Q + V +N++ F + + + S Sbjct: 669 SGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRIIEQSGLS 728 Query: 383 IQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 + LE+TE +VD I L + + ++IDDFGTG SS ++L+ DVLKID Sbjct: 729 PHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKID 788 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 KSF + ++ + II + +++++VAEGVET EQ K L +QG+ +++ Sbjct: 789 KSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSR 848 Query: 501 PMPLRDFPKWLAGSQPP 517 P+P +F +++AG P Sbjct: 849 PLPPEEFERYIAGRTVP 865 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 5/253 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ + + + +F L QP + + +G E L+RW +P G ISPD FIP+AEE Sbjct: 403 LTLGGGLRKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWVHPELGMISPDQFIPLAEES 462 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 LI+PL +V+ RQ + + + +N++ F + L+ + + + Sbjct: 463 GLILPLGEWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFMQADLVDMVQRALEETGVDP 522 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LE+TE + D I + + L+IDDFGTG SS ++L+ LKID+ Sbjct: 523 EYLELELTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTLKIDR 582 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF +G D N + IA+ LN++++AEGVE + Q L + +QGYL+++P Sbjct: 583 SFIHDLGLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYLFSKP 642 Query: 502 MPLRDFPKWLAGS 514 + DF +L Sbjct: 643 LSSDDFLMYLKAH 655 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 81/255 (31%), Positives = 136/255 (53%), Gaps = 7/255 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R ++ GL + +F L QP + + + GVE L+RW +P +G + P FIP Sbjct: 645 AVIKRAKIEADLRQGLIKKQFLLHYQPQI-FSNGRMTGVEALVRWQHPVRGLVPPSDFIP 703 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQ-YW 377 +AEE LI+ L +V+ +Q + P + V +NV+ F + + + + Sbjct: 704 LAEETGLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSVQQFHQPEFVDHIQEVIR 763 Query: 378 FSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + ++L LE+TE +V I + L + ++DDFGTG SS S+L+ L D Sbjct: 764 VTGANPERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDDFGTGYSSLSYLKQLPLD 823 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + +D ++T+ I+ L Q L + ++AEGVET+ Q +L G H QG Sbjct: 824 QLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVETEAQRNFLETSGCHSCQG 883 Query: 496 YLYAQPMPLRDFPKW 510 Y +++P+P+ +F ++ Sbjct: 884 YFFSRPLPIEEFEEY 898 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 139/261 (53%), Gaps = 5/261 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + R+ F ++ + + +FEL QP +N+ S + + VE L+RW +PR+G +SP FIP Sbjct: 952 SVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIP 1011 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS 379 IAEE LI+PL +V+ E RQ ++ + V +N++ LI + + + Sbjct: 1012 IAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGN 1071 Query: 380 -AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 L LEITE A+ D IA+ L + L+IDDFGTG SS S+L+ L D Sbjct: 1072 HGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDT 1131 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LK+D+SF I + + + IAL L +E+VAEG+ET+ Q + L H +QGY Sbjct: 1132 LKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGY 1191 Query: 497 LYAQPMPLRDFPKWLAGSQPP 517 L++ P+P ++ Q Sbjct: 1192 LFSAPLPAERALAYIREQQAA 1212 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 27/266 (10%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R + L LA+ EF L QP ++ + + +G E LLRW + +G ISP FIP+AE Sbjct: 681 ERSGLEHNLRLALAREEFFLAYQPQVDQATGKVLGSEALLRWRHAEKGMISPGQFIPLAE 740 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSAHP 382 E LI+P+ +V+ Q + ++ + +N++ F++ + Q Sbjct: 741 ESGLILPIGHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQFQQPDFFDQVAQVLKD--- 797 Query: 383 IQQLILEITE------------RDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 TE + D D + R L V +AIDDFGTG SS S+ Sbjct: 798 --------TELDPRYLELELTESLLMADADVAVETLRALRDLGVGIAIDDFGTGYSSLSY 849 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+T D +KI + F I D ++ + + +IA+ L +++VAEGVET+ Q ++LR Sbjct: 850 LKTFPIDRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQLEFLRAR 909 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGS 514 ++QGY + +PMP +F ++L+ + Sbjct: 910 RCQVMQGYYFGRPMPAENFIEYLSEN 935 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 86/254 (33%), Positives = 132/254 (51%), Gaps = 4/254 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R++ E+ + + EF L QP + S +GVE L+RW +P +G I P FIPIAE Sbjct: 377 ERLTLQHEMYRAIQRKEFILLYQPQYDLVSGMMVGVEALVRWRHPAKGMIPPGEFIPIAE 436 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 E +IV + +V+ E RQ + + V +N++ F + L + + Sbjct: 437 ESGMIVQIGDWVLEEACRQNKAWQDAGLPPMPVSVNLSIRQFVQQDLASKVASVLEKTGL 496 Query: 382 PIQQLILEITERDALLDVD-YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 + L LEITE + R EL V +++DDFGTG SSF +L+ D LKID Sbjct: 497 KPEYLDLEITESMTMDTGHVSRCLLELTDMGVGISVDDFGTGYSSFHYLKNFPIDRLKID 556 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF I D ++ + IIA+ LNI+++AEGVE EQ ++LR+H +QGY ++ Sbjct: 557 RSFVRDIQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRKHNCDEMQGYFWSP 616 Query: 501 PMPLRDFPKWLAGS 514 P+ D + L + Sbjct: 617 PVSSTDIEQMLGAA 630 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 5/258 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 + + R+ + L +HEF L Q N ++ + GVE L+RW +P G ISP Sbjct: 319 LKVRSLERLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAH 378 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FIP+AEE LIV L R+V+ Q ++ + +N++ F LI D+ Sbjct: 379 FIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANA 438 Query: 377 W-FSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 S + L +EITE + D + RI + V+LAIDDFG G SS + ++ Sbjct: 439 LRESGLAPELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFP 498 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D LK+D SF I ++ + +T+ IIA+G+ L++ ++AEGVETQEQ +LR Sbjct: 499 IDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQT 558 Query: 494 QGYLYAQPMPLRDFPKWL 511 QGY +++P+ +F +++ Sbjct: 559 QGYYFSKPVSPEEFTRFM 576 >UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L613_MAGSM Length = 577 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 130/260 (50%), Gaps = 6/260 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R + + ++E L+ QP ++ IG E L+RW +P +G ISP FIP Sbjct: 316 AARERFELETHLRQAIEKNELVLYYQPQVDLHDGTIIGAEALIRWKHPERGLISPAQFIP 375 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS 379 +AEE LIVP+ +VM IRQ ++ VGIN++ F+R L + + Sbjct: 376 VAEETGLIVPIGEWVMRTAIRQIAIWKELGVTPVRVGINLSALQFKRQNLAALVEELLNE 435 Query: 380 AHPIQQLI-LEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 L+ LEITE + DV I + + VKL+IDDFGTG SS S L Sbjct: 436 HDIDPSLVDLEITESAIMDDVGRAIEMLKRISALGVKLSIDDFGTGYSSLSQLRQFPFQT 495 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + S + + + IIA+ L ++ EG+ET Q ++ + +QG+ Sbjct: 496 LKIDRSFVTDLES-SGDKAIVSAIIAMAHSLEQTVIVEGLETSAQLTIMKELNCNEMQGF 554 Query: 497 LYAQPMPLRDFPKWLAGSQP 516 L+++P+P +F L + Sbjct: 555 LFSKPLPAEEFTALLREGRR 574 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 84/252 (33%), Positives = 130/252 (51%), Gaps = 5/252 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ + L ++EF L Q L+ Q IG E L+RW++ G +SP FIP+AEE Sbjct: 792 RLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEE 851 Query: 326 HHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHP 382 +I+ + +V+ + R + VG+N++ FR L + ++ S Sbjct: 852 TGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLT 911 Query: 383 IQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L LEITE + + + + + + IDDFGTG SS +L+ D LKID Sbjct: 912 PNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKID 971 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF I D+ + +T IIA+ L I +VAEGVETQ Q ++LR G LQGY++++ Sbjct: 972 RSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSR 1031 Query: 501 PMPLRDFPKWLA 512 P+ + DF L Sbjct: 1032 PLVVEDFVGLLR 1043 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 87/248 (35%), Positives = 136/248 (54%), Gaps = 6/248 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ L + E +F QP +N ++ + GVE LLRWN+ G I+PD FIP+AEE Sbjct: 684 IKLENDLYKALERDELIIFYQPQINYKTNKIKGVEALLRWNHREHGMITPDRFIPLAEET 743 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSA-HPI 383 LIVP+ +V+ E +Q + + +N++ F + L + + Sbjct: 744 GLIVPIGEWVLKEACKQLKEWHNQGYPLISMSVNLSVHQFEQNNLFSIIENVLYETDLSP 803 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LE+TE + + + + +L+ V LAIDDFGTG SS +L+ L LKIDK Sbjct: 804 EYLQLELTENLIVKNTEVTLKTMTQLNGLGVNLAIDDFGTGYSSLGYLKNLPISTLKIDK 863 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + +D + +T+ II L Q L +E++AEGVET+EQA YL H++QGY +++P Sbjct: 864 SFVQEMLTD-DAAAITNTIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFSKP 922 Query: 502 MPLRDFPK 509 M + K Sbjct: 923 MKAGEIMK 930 >UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobacteriaceae RepID=YCGG_ECOLI Length = 507 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 132/505 (26%), Positives = 231/505 (45%), Gaps = 28/505 (5%) Query: 16 MIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLI 75 I+ IC +T + L+++ + A +A ++ +L ++ + + Sbjct: 7 PILVAICLFITGVAILNIQLWYSAK---AEYLAGARYAANNINHILEEASQATQTAVNIA 63 Query: 76 GLPCS-VAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPA-PQPL 133 G C+ L +AA +R+I +++ G ++C+S+ G R +L+ +P P Sbjct: 64 GKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNR-----VLLSRIPVFPDSN 118 Query: 134 LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDK 193 L L + P+L+ A + ++ I+ + L P + D Sbjct: 119 LLLAPAIDTVNRLPILLYQNQFA---DTRILVTISDQHIRGALNVPLKGVRYVLRVADDI 175 Query: 194 RHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSL 253 ++ + +V S ++ FTI N P + + + + + + L Sbjct: 176 IGPTGDVMTLNGHYPYTE----KVHSTKYHFTIIFNPPPLFS-FYRLIDKGFGILIFILL 230 Query: 254 LVGYIAWLATAY---RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPR 310 + A+L Y + + + E F QP++N R GVE+L RW P Sbjct: 231 IACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPH 290 Query: 311 QGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGV 368 G+ISP FIP+AE+ LIVPLT+ +M + RQ + + FH+GIN + SH Sbjct: 291 GGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPT 350 Query: 369 LIKDLNQYWFS-AHPIQQLILEITERDALLDVDYRIAREL---HRKNVKLAIDDFGTGNS 424 + + + S L+LE+TER+ L +VD + + L H +A+DDFGTG S Sbjct: 351 FVDECLNFRDSFTRRDLNLVLEVTEREPL-NVDESLVQRLNILHENGFVIALDDFGTGYS 409 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 S+L L D +KID SF + +D ++ + D ++ L ++L+I +VAEGVET+EQ Y Sbjct: 410 GLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDY 469 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPK 509 L ++ + QGY + +P+ D K Sbjct: 470 LNQNYITFQQGYYFYKPVTYIDLVK 494 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 85/257 (33%), Positives = 132/257 (51%), Gaps = 5/257 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 +A + + L +HEFEL QP + + +G E LLRW +P G ISP FIPI Sbjct: 779 SARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPI 838 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AE+ I+ + +V+ +RQ + + + +N++ FR L+ + + A Sbjct: 839 AEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRHPNLMALVTRILDEA 898 Query: 381 -HPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P + L LE+TE A+ D I +L ++++IDDFGTG SS S+L+ + + L Sbjct: 899 ALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKL 958 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I D + + II L L + +AEGVET Q +LR G +QGY Sbjct: 959 KIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYY 1018 Query: 498 YAQPMPLRDFPKWLAGS 514 ++P+P F ++ S Sbjct: 1019 VSKPLPKDQFEAFVRNS 1035 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 85/256 (33%), Positives = 135/256 (52%), Gaps = 7/256 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ ++ + + Q FEL QP+++ S +G E L+RW +P +G ISP FIP+ Sbjct: 770 ALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKHPERGMISPLEFIPV 829 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AEE LIVP+ +V+ E +RQR + + +NV+ FR L + + Sbjct: 830 AEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEF 889 Query: 380 AHPIQQLILEITERDAL---LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 L+ EITE + +V+ R ++ + + A+DDFGTG SS S+L+ D+ Sbjct: 890 GTARSSLVFEITESVLMGGSENVEAR-MCDIKEQGICFALDDFGTGFSSLSYLKRFPVDI 948 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 +KID+SF D ++T+ + II + L + + AEGVE+ EQ ++LR G LQGY Sbjct: 949 VKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGY 1008 Query: 497 LYAQPMPLRDFPKWLA 512 L +P+ F +A Sbjct: 1009 LIGKPLAADAFEALMA 1024 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 93/257 (36%), Positives = 140/257 (54%), Gaps = 7/257 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R + E+ L L E L QPL+N +G E L+RW +P++G + P FIP Sbjct: 592 AVLARAALESELRLALESDELLLHYQPLVN-GDGSMLGAEALVRWRHPQRGLVMPGEFIP 650 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 AE+ LIV L ++V+ Q + ++Q + +NV+ FR+ + L Q Sbjct: 651 AAEQGGLIVALGQWVLERACAQLVAWSRSAATAQLVLAVNVSVRQFRQPDFVDQLLQTLR 710 Query: 379 -SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 S + L +E+TE + DV+ IAR +L V AIDDFGTG SS ++L+ L D Sbjct: 711 RSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGTGYSSLAYLKRLPLD 770 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + +D ++ + I+AL + L++E+VAEGVET Q K+L+RHG QG Sbjct: 771 QLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQLKFLQRHGCKAFQG 830 Query: 496 YLYAQPMPLRDFPKWLA 512 +L+ +P P + L Sbjct: 831 HLFGRPAPAAVLERALR 847 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 97/260 (37%), Positives = 141/260 (54%), Gaps = 7/260 (2%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 A R ++ L FEL Q ++AR G E LLRW +P++GWI+P FIP+A Sbjct: 790 AARAELEVDLREALRLGAFELHYQAQVDAR-GCVSGAEALLRWQHPQRGWIAPASFIPLA 848 Query: 324 EEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKD-LNQYWFS 379 EE LI+PL +V+ Q + P ++ + +NV+ FR+ L S Sbjct: 849 EETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFRQADFAAQVLAAIERS 908 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 ++L LE+TE L ++D I + L + ++DDFGTG SS ++L+ L D + Sbjct: 909 GADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSSLAYLKRLPLDEI 968 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + DA ++++ I+ALGQ LN+E+VAEGVET Q +L HG QGYL Sbjct: 969 KIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFLAEHGCQAYQGYL 1028 Query: 498 YAQPMPLRDFPKWLAGSQPP 517 + +P P R F W AG P Sbjct: 1029 FNRPQPARQFEAWGAGHPCP 1048 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 5/257 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R+ R++ +A+ EFEL+ QP ++R G+E L+RW +P+ G I+P FIP Sbjct: 552 AATARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIP 611 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDL-NQYWF 378 +AEE +IV + +V+ E RQ + + + + +N++ R L+ + Sbjct: 612 LAEETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAA 671 Query: 379 SAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S L LEITE + + D +A + L V++AIDDFGTG+SS S+L+ D Sbjct: 672 SGLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDH 731 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + I DA ++ + ++L L + ++AEGVE+ Q LR G LQG+ Sbjct: 732 LKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGF 791 Query: 497 LYAQPMPLRDFPKWLAG 513 +++P+ L Sbjct: 792 HFSRPVTADVVENLLRS 808 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 138/262 (52%), Gaps = 6/262 (2%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 +R+S ++ L + L QP + R+ Q IG+E L+RW +P+ G I P FIP++E Sbjct: 560 HRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSE 619 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 + LIVP+ +VM Q ++ V +N++ + L+ + + S Sbjct: 620 DDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGL 679 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 Q L LEITE + +++ I + V+L++DDFGTG SS S+L+ L + LKI Sbjct: 680 DPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKI 739 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 DKSF I + ++ + IIAL L I+++AEGVE+ +Q +L +G +QGYL + Sbjct: 740 DKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLS 799 Query: 500 QPMPLRDFPKWLA-GSQPPPAR 520 +P P + L G + PA Sbjct: 800 RPRPFEEMEALLRDGGRLLPAS 821 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 138/255 (54%), Gaps = 7/255 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R R++ + ++F+L Q +++ S Q +G E L+RW +P +G +SP FIP+AEE Sbjct: 524 RADMERDLRKAIEDNQFQLHYQAQVSS-SGQTLGAEALIRWQHPERGQVSPFNFIPLAEE 582 Query: 326 HHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH- 381 LI+P+ ++V+ Q + P++ + +N++ + ++ + Sbjct: 583 TGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDI 642 Query: 382 PIQQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 +L LE+TE + ++ I + L + + ++DDFGTG SS +L+ L + +KI Sbjct: 643 NPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKI 702 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + +DA + + II + L+I ++AEGVET E+ +YL +G QGYL++ Sbjct: 703 DQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFS 762 Query: 500 QPMPLRDFPKWLAGS 514 +P+P+ +F L Sbjct: 763 KPVPINEFEVLLKKG 777 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 141/257 (54%), Gaps = 7/257 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R++ E++ L + +F L Q ++A S + +G E L+RW +P +G + PD FI Sbjct: 554 AVTARVALEGELHKALDRQQFRLHYQIQVDA-SGRPLGAEALIRWMHPERGLVPPDQFIG 612 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS---QFHVGINVAPSHFRRGVLIKDLNQ-YW 377 +AEE LI+P+ ++VM Q + + + +NV+ + F + + + Sbjct: 613 MAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQ 672 Query: 378 FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A + L LE+TE L +++ I L V+ ++DDFGTG SS +L+ L D Sbjct: 673 RHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLD 732 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+SF I SD+ + + IIA+ Q L ++++AEGVET+EQ ++L+ +G QG Sbjct: 733 QIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQG 792 Query: 496 YLYAQPMPLRDFPKWLA 512 YL+ +P+P+ F L Sbjct: 793 YLFGKPVPVEQFEAMLQ 809 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 91/249 (36%), Positives = 137/249 (55%), Gaps = 5/249 (2%) Query: 269 FSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHL 328 F + L ++EF L QP ++ S + +G+E+LLRW++P G +SP FIPIAE+ L Sbjct: 1258 FENALRGALKRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGL 1317 Query: 329 IVPLTRYVMAETIRQRHVFPMSS-QF-HVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQQ 385 I + +V+ Q + F H+ +NVA ++ + + S P Sbjct: 1318 IQEIGTWVLYRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDSSGLPSPH 1377 Query: 386 LILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSF 443 L LE+TE + + RI L + LAIDDFGTG SS S+L+ L + LKIDKSF Sbjct: 1378 LELELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSF 1437 Query: 444 TAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 I D + +++ +IALG+ LN+ ++AEGVE + QA +LR G H QGYLY++P+P Sbjct: 1438 VRDIPHDTNDMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLP 1497 Query: 504 LRDFPKWLA 512 + + A Sbjct: 1498 PEEITQLFA 1506 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 87/251 (34%), Positives = 134/251 (53%), Gaps = 5/251 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 R + ++ L EFELF QPL + ++ G E LLRW +P +G +SP FIP+A Sbjct: 449 QARRALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPADFIPLA 508 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDL-NQYWFSAHP 382 EE LIV L +V+ + +P + +N++P+ FR L++ + + S P Sbjct: 509 EEIGLIVQLGEWVLRRACAEAANWPE--HVRLAVNLSPAQFRDRGLVRTVVSALAASGLP 566 Query: 383 IQQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 Q+L LEITE L D + + +L V++++DDFGTG SS S+L + D +KID Sbjct: 567 AQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKID 626 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 ++F I D+ + ++ LG + + AEGVETQ Q LR+ G +QGY ++ Sbjct: 627 QTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISR 686 Query: 501 PMPLRDFPKWL 511 P P + K L Sbjct: 687 PAPASEIAKML 697 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 138/258 (53%), Gaps = 5/258 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R++ + L + EF L+ QP +N ++ Q + +E L+RW NP G I P+ FIP+AE Sbjct: 442 RRLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAE 501 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWFSA-H 381 + LI+PL +V+ Q + + V +N +P F++ L + Q A Sbjct: 502 DTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADL 561 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 L LE+TE L +V+ + L + ++IDDFGTG SS S+++ L LKI Sbjct: 562 APCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKI 621 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF I ++A ++ + +I + Q L + ++AEGVET EQ K L +QGYL++ Sbjct: 622 DRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFS 681 Query: 500 QPMPLRDFPKWLAGSQPP 517 +P+P+ + L+ + P Sbjct: 682 KPLPVAEMTTLLSNIKWP 699 >UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNC8_CLOCL Length = 584 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 138/253 (54%), Gaps = 5/253 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 R ++ + + +F L QP ++ + + +GVE L+RW++P+ G ISP FIPI Sbjct: 328 NRRTILENDLMTAIEKGQFFLVYQPQVSLNTGKMVGVEALIRWSHPKLGLISPFEFIPIV 387 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWFS-A 380 EE LI + +V+ + Q + F V +N++ ++ + K + + Sbjct: 388 EESGLIDSIGEWVIRTSCIQAKEWRDKKLPFFKVAVNISSIQLKKMNICKIIKDILKELS 447 Query: 381 HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L +E+TE + D++ I REL+ +K+AIDDFGTG SS ++L D LK Sbjct: 448 LDPNVLEVELTESAMMEDIELAIENFRELNNMGIKIAIDDFGTGYSSLNYLRKFSIDKLK 507 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF +G D ++ +T II + + L+ +++AEGVET+E KYL +G +QGY + Sbjct: 508 IDRSFVTELGDDFESTIITKTIIDMAKNLSFKVIAEGVETKEHLKYLMENGCDEVQGYYF 567 Query: 499 AQPMPLRDFPKWL 511 ++P+ + +++ Sbjct: 568 SKPITAEEVEEFV 580 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 138/269 (51%), Gaps = 13/269 (4%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + + + L + +F L QP ++ + +G E LLRW +P G +SP F+PIAE + Sbjct: 742 LLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESN 801 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPI 383 LI + +V+ E + Q + + +N++ + FR L + ++Q P Sbjct: 802 GLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPP 861 Query: 384 QQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 Q+ LE+TE A+ D R+ L + ++++IDDFGTG SS +L+ + LKID+ Sbjct: 862 HQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQ 921 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF IG D + + II L L + VAEGVET +Q +LR+ G +QGY +++P Sbjct: 922 SFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRP 981 Query: 502 MPLRDFPKWLAGSQPPPARHNGHITPIMP 530 +P F +L +G +TP P Sbjct: 982 LPAEAFVGYLQ--------ESGALTPSPP 1002 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 137/261 (52%), Gaps = 5/261 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T R+ ++ + + + E+F QP LN Q E L+RW +P+QG ++P FI + Sbjct: 698 TLERLQLENQLRKAIEEGQLEVFYQPKLNLADDQLNAAEALVRWRHPQQGLVAPGEFIGL 757 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LI P+ +V+ + RQ + + V +N++ R+G L + Q + Sbjct: 758 AEETGLIAPIGEFVLRQACRQARQWQQQGLAEIRVSVNISVYQLRQGNLTSLVRQVLEET 817 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L LE+TE L +VD + R+L VKLAIDDFGTG SS S+L+ + Sbjct: 818 GLAPQYLELELTESQLLDNVDSVVVTFRQLRELGVKLAIDDFGTGYSSLSYLKRFPVHYV 877 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID++F + ++ +T IIA+ L +++VAEGVETQ Q +L+ +QGYL Sbjct: 878 KIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKVVAEGVETQAQMDFLKSQNCDEIQGYL 937 Query: 498 YAQPMPLRDFPKWLAGSQPPP 518 ++P+ F + L + P Sbjct: 938 ISRPVEAAAFAELLRAQRDDP 958 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 88/252 (34%), Positives = 145/252 (57%), Gaps = 7/252 (2%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 A R+ ++ GL EF L QP ++ + +G E LLRW NP++G I P FIP+A Sbjct: 691 ADRVEMEEDLRNGLRNDEFFLCYQPQVD-NQGRLLGAEALLRWRNPKRGMIPPSTFIPLA 749 Query: 324 EEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 E+ LIV + +VM +Q ++ P++S + +NV+ R+ + + + + Sbjct: 750 EDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVT 809 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 ++L LE+TE + +++ IA+ EL V +IDDFG G SS S+L+ L D L Sbjct: 810 GANPKRLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQL 869 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +D ++ + IIALG+ LN++++AEGVET Q ++L +G QGYL Sbjct: 870 KIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYL 929 Query: 498 YAQPMPLRDFPK 509 +++P+P +F + Sbjct: 930 FSKPVPADEFER 941 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 5/258 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 TA + + L + +FEL QP ++ + Q +G E LLRW++P G ++P FIP+ Sbjct: 724 TARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPV 783 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVF-PMSSQFH-VGINVAPSHFRRGVLIKDLNQYWF-S 379 AE IV L +V+ R + M V +N++ FR L + + + + Sbjct: 784 AENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQA 843 Query: 380 AHPIQQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P ++L LE+TE A+ D + +LH + V+L++DDFGTG SS S L+ + L Sbjct: 844 GLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKL 903 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + DA + + II + Q L ++ AEGVET Q ++LR G QGYL Sbjct: 904 KIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYL 963 Query: 498 YAQPMPLRDFPKWLAGSQ 515 +++P+P F +L + Sbjct: 964 FSRPLPADAFEAYLRAMK 981 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 85/256 (33%), Positives = 130/256 (50%), Gaps = 5/256 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ ++ L EF L QP ++ G E LLRW +PR+G + P FIP+ Sbjct: 1151 ALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPV 1210 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 EE L+ + +++AE +Q + + V +N++ F G L + + + Sbjct: 1211 LEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYET 1270 Query: 380 AHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L LE+TE + DV I L R + +A+DDFGTG SS ++L+ DVL Sbjct: 1271 GIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVL 1330 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + ++ + IIA+ LN+ ++AEGVE+Q Q +LR HG +QGYL Sbjct: 1331 KIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYL 1390 Query: 498 YAQPMPLRDFPKWLAG 513 + +PMP F A Sbjct: 1391 FGRPMPAEQFGMLYAS 1406 >UniRef50_A5VAG1 EAL domain protein n=2 Tax=Alphaproteobacteria RepID=A5VAG1_SPHWW Length = 537 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 144/511 (28%), Positives = 231/511 (45%), Gaps = 33/511 (6%) Query: 17 IVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIG 76 I+ + +V +A L VR ++ + + ++ + ++V + G Sbjct: 15 ILAGLLPMVAVAHLLRVRAVAAEQRHMEEYARW---TLIRANQVFADARRTLLAAEVPPG 71 Query: 77 LPCSVAHLP-LRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLR 135 CS H+ LR+ A ++V IG +DG L C+S+ + +P P LR Sbjct: 72 TECSPEHVARLRQIAMDARSVEDIGYFRDGRLACTSLG--------PVGQRVPRTPPDLR 123 Query: 136 LTIDRALI-KGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKR 194 L A+I P + P S+ G +I + L +L + + + + Sbjct: 124 LGGGFAVIFHLQPRTFRSQPMLAMSHGGYTALIKPERLVDVLTDSHM----TLGIAAGPG 179 Query: 195 HLLYGNGLVDSL---------PQPEDNENYQVSSQRFPFTINVNGPGATALAW---HYLP 242 L+ +G D D+ + S + P T A AL YL Sbjct: 180 RLIALSGRTDPQLLRTLIAGPTAGIDDHHVFASLREAPLTAFAFSDRAQALGRLRNDYLL 239 Query: 243 TQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEI 302 ++ +LLVG + W++ R+S +E+ + + + EF + QP+++ + +C+ E Sbjct: 240 LLPMGLLVSTLLVGLVIWVS-RQRLSPEKELAIAIRKREFVVHYQPIIDLSNGRCVAAEA 298 Query: 303 LLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIR-QRHVFPMSSQFHVGINVAP 361 LLRW P WI PD+FIP+AEE LI PLT ++ I Q + H+ IN++ Sbjct: 299 LLRWRRPDGRWIGPDLFIPLAEETGLISPLTDLLIERVIEDQAALLRADRDLHISINISA 358 Query: 362 SHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALL-DVDYRIARELHRKNVKLAIDDF 419 G + L + S Q+ +E TE+ + ++ +AIDDF Sbjct: 359 RDLESGRFLPVLTEAVTRSGVAPSQIWIEATEQGFIRAEIAAGAVEAARAAGHMVAIDDF 418 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GTG SS S L+ L D LKIDKSF AI +DA S VT II + L + ++AEGVET+ Sbjct: 419 GTGYSSLSLLQGLPLDALKIDKSFVEAIATDAATSVVTPHIIDMAHGLKLRIIAEGVETR 478 Query: 480 EQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 EQ YLR GV + QG+LY+ +P +F + Sbjct: 479 EQEAYLRAAGVRLAQGWLYSHALPASEFATF 509 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 78/255 (30%), Positives = 130/255 (50%), Gaps = 8/255 (3%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R + + + ++F L Q + + G E L+RW +P++G + P FIP+AE Sbjct: 774 QRAALEAGLRNAIEDNQFLLHYQAQV--VGTRVTGAEALVRWQHPQRGIVPPAEFIPLAE 831 Query: 325 EHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 E LIV L +V+ Q + P + + +NV+ FR+ + ++ + Sbjct: 832 ETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTG 891 Query: 381 HPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 +L LE+TE + +V I + L K + A+DDFG G SS S+L+ L D LK Sbjct: 892 ARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLK 951 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + D+ ++ + I+AL + L + ++AEGVET+ Q +L G + QGY + Sbjct: 952 IDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYF 1011 Query: 499 AQPMPLRDFPKWLAG 513 +P+P+ DF L Sbjct: 1012 CRPLPIEDFEALLNN 1026 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 133/243 (54%), Gaps = 5/243 (2%) Query: 280 HEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAE 339 +EF L QP ++ S Q +G+E L+RW++P G + P FIP+AEE LI PL+ +V+ E Sbjct: 808 NEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLRE 867 Query: 340 TIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDAL 396 RQ + V +N++ F++ + K + Q + + L LE+TE + Sbjct: 868 ACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIM 927 Query: 397 LDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNS 454 + + + ELH + LAIDDFGTG SS S+L+ D LKID+SF + IG + Sbjct: 928 RNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDE 987 Query: 455 TVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 T+T IIAL L ++++AEGVET Q +L+ +QG+ +A+P+ + L G Sbjct: 988 TITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELLHGG 1047 Query: 515 QPP 517 P Sbjct: 1048 LVP 1050 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 94/265 (35%), Positives = 137/265 (51%), Gaps = 8/265 (3%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ +++ L +++F L QP ++ R+ IGVE LLRW +P +G I P FIP+ Sbjct: 619 AIRRLEIVNDLHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGLIPPLEFIPV 678 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVF----PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 AEE LI L R+V+ +Q + P + +N++ + L +++ Sbjct: 679 AEETGLINDLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRLAEEVAAALE 738 Query: 379 -SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 S P QL+LEITE + D I L V+LAIDDFGTG SS ++L+ D Sbjct: 739 DSGFPADQLVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSLTYLQRFPID 798 Query: 436 VLKIDKSFTAAIGS-DAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 +LKIDKSF +GS + S VT I+AL + L +E VAEGVE E + L+ I Q Sbjct: 799 ILKIDKSFVDGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVRELQSLHCDIGQ 858 Query: 495 GYLYAQPMPLRDFPKWLAGSQPPPA 519 GY +A+P+ +A P A Sbjct: 859 GYFFARPLDAGALTTLMAQPDTPVA 883 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 93/251 (37%), Positives = 137/251 (54%), Gaps = 4/251 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R S ++ L + EF +F QP ++ R+ +GVE LLRW + G ISP FIP+AE Sbjct: 688 ERFSLVNDLRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAE 747 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHP 382 E LIVP+ +V+ E+ R ++ F +G+N+A L+ + S Sbjct: 748 EQGLIVPIGEWVLRESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIR 807 Query: 383 IQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L LE+TE L + I + + L++DDFGTG SS S+L+ L + LKID Sbjct: 808 PHLLDLEVTENFLLKQPEITIPKLHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTLKID 867 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF IGSD + II L + L +E +AEGVET EQ YLR HG H++QGY +++ Sbjct: 868 QSFVRDIGSDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSR 927 Query: 501 PMPLRDFPKWL 511 P+P + P ++ Sbjct: 928 PLPAEELPDFV 938 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 92/256 (35%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A + R + ++ GL + ELF QP ++ + G E L+RW +P +G+ISP FIP Sbjct: 788 AVSERAALEADLRAGLDAGQLELFYQPKVD--QGRITGAEALVRWRHPDRGFISPAEFIP 845 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLI-KDLNQYW 377 +AEE LI+ + +VM Q + P+ + V +NV+P F G + + L Sbjct: 846 LAEESGLILRVGEWVMRSACAQLAQWSAHPVLGELTVAVNVSPRQFHEGSFVPQVLEALA 905 Query: 378 FSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 S ++L LE+TE L DV+ IA+ +L V ++DDFGTG SS ++L+ L Sbjct: 906 ASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGYGVGFSLDDFGTGYSSLAYLKRLPLH 965 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKIDKSF + +D ++ + I+ALG L + +VAEGVET+ Q +L R+G H QG Sbjct: 966 ELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLRVVAEGVETEAQRAFLERNGCHAWQG 1025 Query: 496 YLYAQPMPLRDFPKWL 511 YL + P+ F + Sbjct: 1026 YLLSPPLQAAAFEALV 1041 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 84/253 (33%), Positives = 142/253 (56%), Gaps = 7/253 (2%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 + ++ + Q +F+L QP A + IG E LLRW +P +G +SP FIP+AEE + Sbjct: 680 ALVVDLRQAIWQGQFQLHYQPQ-TANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESN 738 Query: 328 LIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 LI+ + R+V+ E Q + P + + +NV+ FR+ + ++ + + Sbjct: 739 LILAIGRWVLEEACGQLAAWADLPAAGNCKLAVNVSARQFRQPEFVAEIRRILAATGADP 798 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LE+TE + ++ + +EL + ++DDFGTG SS + L+ L + LKID+ Sbjct: 799 KLLKLELTESIVMTELADTVSKMQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDR 858 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 +F +GSD + + + IIA+G+ L+I+++AEGVET+EQ L R+G QGYL+++P Sbjct: 859 AFVRDLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRP 918 Query: 502 MPLRDFPKWLAGS 514 +P F L Sbjct: 919 VPAAQFAHLLTSG 931 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 90/258 (34%), Positives = 140/258 (54%), Gaps = 6/258 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ ++ LA+ EFEL QP + A IG E L+RW +P +G I+P FIP+AEE Sbjct: 586 LTMESDLRHALARDEFELHFQPKVRA-DLTLIGAEALIRWRHPEKGLINPGDFIPLAEES 644 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 LI+P+ R+ + E + + V +NV+P F+ L++ + Q + Sbjct: 645 GLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEP 704 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LEITE DV++ + R L V L+IDDFGTG SS ++L+T D LKID+ Sbjct: 705 EALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQ 764 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 +F + ++ + IIAL + L +VAEGVE EQA++L QG+LY++P Sbjct: 765 TFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRP 824 Query: 502 MPLRDFPKWLAGSQPPPA 519 +P +F +L ++ A Sbjct: 825 LPPAEFTTFLRTAKLETA 842 >UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJT4_ALKOO Length = 504 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 94/257 (36%), Positives = 139/257 (54%), Gaps = 7/257 (2%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + ++ ++ L + EFEL+ QP +++ + + +G+E LLRW NP G +SP FI Sbjct: 247 IKMNRKLELINNLHKALEKKEFELYYQPQIDSETNEIVGLEALLRWQNPTLGRVSPAEFI 306 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW- 377 P+AEE LI+P+ +V+ Q + V +N++ F + + + Sbjct: 307 PVAEETGLIIPIGDWVLKTACAQNATWQKEGYKPIPVSVNISTIQFNEPLFVDKVVTILK 366 Query: 378 FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + + L LEITE A+ D I L + VK+A+DDFGTG SS +L + + Sbjct: 367 ETTLNPKWLHLEITESVAINDATLTINVLNRLQKIGVKIALDDFGTGFSSLGYLSKFKIN 426 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 VLKID SF IG D ST+T II LG+ LN+E+VAEGVET EQ YL+ G I+QG Sbjct: 427 VLKIDSSFVQDIGEDE--STITKTIIVLGKNLNMEVVAEGVETNEQLDYLKNAGCDIIQG 484 Query: 496 YLYAQPMPLRDFPKWLA 512 YL++ P+P K Sbjct: 485 YLFSSPLPAGQIEKMFK 501 >UniRef50_A0YP68 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=2 Tax=Oscillatoriales RepID=A0YP68_9CYAN Length = 575 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 141/257 (54%), Gaps = 5/257 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 +++ ++ L ++F+L+ QP ++ ++ Q IG E L+RW ++G++SP VFIP+A Sbjct: 315 HDQIALENDLRQALEHNQFQLYYQPKVDLKTGQIIGAEALIRWIESKRGFVSPAVFIPLA 374 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA- 380 EE LI P+ +V+ RQ + + +N++ F + + + + Sbjct: 375 EEIGLIEPIGEWVLRTACRQTKTWHKLGLETLKMAVNLSGCQFNLPDICPMVLETLLAED 434 Query: 381 HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P L LE+TE + D I L +K+AIDDFGTG SS S+L+ DVLK Sbjct: 435 LPSSCLELELTESFLVEHEDASIQKLNRLKALGLKIAIDDFGTGYSSLSYLQQFPFDVLK 494 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 +D+ F I + N + + +I + +LN+E+VAEGVET + LR++ I+QGYL+ Sbjct: 495 LDRCFVQNIDQNPKNKIIVEAVIKMAHQLNLEVVAEGVETTAELHVLRQYQCDIIQGYLF 554 Query: 499 AQPMPLRDFPKWLAGSQ 515 ++P+P ++F + ++ Sbjct: 555 SRPIPAQEFQALVESNK 571 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 90/257 (35%), Positives = 136/257 (52%), Gaps = 5/257 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 A A R+ ++ L++ E QP + + + IGVE L+RWN QG ISP FI Sbjct: 446 YAAAERLRLEHDLRGALSRDEIFPLYQPQIELATGRVIGVEALMRWNRAGQGLISPASFI 505 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYW- 377 P+AE+ LI+ L Y++ + Q + F + +NV+ FR+ + + Sbjct: 506 PVAEDSGLILALGEYILRKACLQARQWHEHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLS 565 Query: 378 FSAHPIQQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + P + L LE+TE + ++ + + L +KLAIDDFGTG SS S+L D Sbjct: 566 ETGFPPECLELEVTESVVMQGLESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQFAID 625 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + DA + I+A+G+ L + ++AEGVET+ QA++L+ QG Sbjct: 626 RLKIDQSFVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVETEAQARFLQDIECTESQG 685 Query: 496 YLYAQPMPLRDFPKWLA 512 YLYA+PM DF WL Sbjct: 686 YLYARPMKSNDFEAWLK 702 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 89/252 (35%), Positives = 133/252 (52%), Gaps = 5/252 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R S + L L + EF L QP +N + G+E L+RW +P G + P FI +AE Sbjct: 505 QRQSLESSLRLALERQEFLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAE 564 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK-DLNQYWFSAH 381 + L+ P+ R+V+ E RQ + ++ V +NV+ FRR ++ + Sbjct: 565 DCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDL 624 Query: 382 PIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 + L LE+TE + + + IA L VKLAIDDFGTG SS S+L L D LKI Sbjct: 625 DPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKI 684 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + + N+ + II +G+ LN+ ++AEGVETQEQ LR H QGY ++ Sbjct: 685 DRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFS 744 Query: 500 QPMPLRDFPKWL 511 +P+ + + L Sbjct: 745 RPVSVPAVAELL 756 >UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xanthomonas RepID=Q3BN81_XANC5 Length = 520 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 141/521 (27%), Positives = 222/521 (42%), Gaps = 19/521 (3%) Query: 12 RRNRMIVCTICALVTLASTLSVR---FISQR---NLNQQRVVQFANHAVEELDKVLLPLQ 65 +R R+I T+ LV L++TL + +++ R + R+ Q A ++ + Sbjct: 2 KRQRIISVTVL-LVLLSATLPIGLSYYLAWRLALAREEGRLSQLAALSIRRTETAFDEAH 60 Query: 66 AGSEVLLPLIGLPCSVAHL-PLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDIL 124 + PCS HL +R + +G Q G L C+S G + Sbjct: 61 GALLSMAASRLPPCSPPHLAQMRALVLTSHYIVELGRFQQGRLSCTSW-GQLRNTIPQRT 119 Query: 125 AELPAPQPLLRLTIDRALIKG-SPVLIQWTPA-AGSSNAGVMEMINIDLLTAMLLEPQLP 182 A+ + + T L P++ N + INI + + Sbjct: 120 ADFVVKRGIAVTTRLLPLANPQRPLMALQLGDYNALINPDTLADINIPPGLQLAIGTPDG 179 Query: 183 QISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLP 242 QI S++ T +R L + P R V L Sbjct: 180 QILSSTGTAAERLLT--DPPATREPGDLLLSQVLFGRDRRGDWAAVVTEPVAYLRGPLAA 237 Query: 243 TQL---PLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIG 299 +L P+ + ++LL+ + R+S + + + + EF + QP++ S C+G Sbjct: 238 ARLQLVPVGIAVALLLVGAVLWVSRRRLSPLARLEIAVQRGEFIVHYQPIIALDSGACVG 297 Query: 300 VEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRH-VFPMSSQFHVGIN 358 E L+RW P + PD FIP+AE+ LI+P+T V+AE IR+ HV IN Sbjct: 298 AEALVRWQQPDGVLVPPDAFIPLAEQSGLILPITDLVVAEVIRELGPTLAADPALHVAIN 357 Query: 359 VAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALL-DVDYRIARELHRKNVKLAI 416 V+ + G + L Q + QL +E TER + D L ++I Sbjct: 358 VSADDIKSGRVQGVLAQALRGTGVDSGQLWVEATERSLMDIDAARTTITHLRGAGHTVSI 417 Query: 417 DDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGV 476 DDFGTG SS +L+ L D LKIDKSF IG+ + S VT II + + L + +AEGV Sbjct: 418 DDFGTGYSSLQYLQGLPLDALKIDKSFVDTIGTHSATSAVTAHIIEMAKTLRLRTIAEGV 477 Query: 477 ETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 E QEQ YLR HGV + QG+L+++ +P F + A ++ Sbjct: 478 ERQEQLDYLRAHGVDLAQGWLFSRALPATGFIAYYAQARSA 518 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 4/256 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 M ++ + ++E ++ QPL+++ + + +G E LLRW+NP G +SP+ FIP+ Sbjct: 660 ALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFIPL 719 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ-FHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 AEE LI+ + +V+ R + V +N++ F++ L++ + S Sbjct: 720 AEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISGKQFQKRTLVEIVRSSLNESG 779 Query: 381 HPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P L LE+TE L I +EL V AIDDFGTG SS S+L D LK Sbjct: 780 LPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTLK 839 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF +G + ++ + IIA+ +++++V EGVET Q ++LR G HI QG+LY Sbjct: 840 IDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLY 899 Query: 499 AQPMPLRDFPKWLAGS 514 ++P+P +DF + + G Sbjct: 900 SRPIPGKDFQELIDGW 915 >UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacillaceae RepID=C5D6R4_GEOSW Length = 951 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 137/258 (53%), Gaps = 5/258 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T YR+ R + L EF L QP+++ +G E L+RW +P+ G + P+ FI + Sbjct: 693 TLYRLEMERYLRKALENQEFFLCYQPIIDIHKGVIVGNEALIRWRHPKLGLVRPNEFISL 752 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LI + R+V+ +Q + + Q V +NV+ F+ I D+ Q S Sbjct: 753 AEETGLIHEIGRWVLVTACKQTKKWQQLWNQQLFVSVNVSARQFQHEGFIDDVKQALEQS 812 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE L ++ Y I +EL + V +AIDDFG+G +SFS+L+ L ++L Sbjct: 813 QLSPNCLHLELTENSMLRNLHYSIQVMKELQQLGVGIAIDDFGSGYASFSYLKNLPVNIL 872 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +++ + + II +G L ++ VAEGVET EQ + L+ H QGY Sbjct: 873 KIDRSFVEQMHTNSSDIAIVKAIITMGHGLGLKTVAEGVETVEQLELLKMLHCHHAQGYA 932 Query: 498 YAQPMPLRDFPKWLAGSQ 515 +P+ + ++ S Sbjct: 933 LYRPVTAEELSTYMTVSH 950 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 136/254 (53%), Gaps = 3/254 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + R+ E+ + Q +F+++ QP ++ + G+E L+RW +P G I P+ FIPI Sbjct: 452 SLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPI 511 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ-FHVGINVAPSHFRRGVLIKDLNQYWFSA- 380 AEE +I+ L +++ + +Q + V +N++ + L++ + Sbjct: 512 AEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETK 571 Query: 381 HPIQQLILEITERDAL-LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 L LEITE + ++ + +++ ++++IDDFGTG SSFS++++L D +KI Sbjct: 572 LSPHWLELEITESIFVKMEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKI 631 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D SF I + + + I+ + Q LN+ ++AEG+E +Q L+ +G QGYL++ Sbjct: 632 DASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFS 691 Query: 500 QPMPLRDFPKWLAG 513 +P+P DF + L Sbjct: 692 KPLPTDDFDQLLRQ 705 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 84/255 (32%), Positives = 135/255 (52%), Gaps = 7/255 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 +S ++ L E L QP+++ + + +G E L+RW++P +G + P FIP+AEE Sbjct: 570 ISLETDLRQALEAGELLLHYQPIVDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEET 629 Query: 327 HLIVPLTRYVMAETIRQRHVF----PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 LI+PL R+V+ E RQ + P ++ V +NV+ F + L++ + Q + Sbjct: 630 GLILPLGRFVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVKDGLVEHVAQVLAATGL 689 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P L LEITE + D ++ L VK+AIDDFGTG SS S+L L D LKI Sbjct: 690 PPACLKLEITESVLMHDAEHTARELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKI 749 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + G D + + II+L + L + ++AEGVE +Q LR QG++++ Sbjct: 750 DRSFISGQGCDGESQEIVKSIISLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFS 809 Query: 500 QPMPLRDFPKWLAGS 514 +P+ + + Sbjct: 810 RPVEATAAGRLIRQH 824 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 142/261 (54%), Gaps = 5/261 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + R+S ++ L Q E L QP ++ RS + +GVE LLRW +P++GWI+P FI Sbjct: 585 IRARERLSLEADLRRALQQGELALHYQPQVDLRSGRIVGVEALLRWRHPQRGWIAPGAFI 644 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LI+ L +V+ Q + + +N++ G L+ + + Sbjct: 645 PLAEECGLIIELGDWVLRAACEQIRHWSDAGVAPRQTAVNISAVQISSGGLLDTVRRTLA 704 Query: 379 -SAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + +L LEITE + + + ++ +L V+L+IDDFGTG SS ++L+ L Sbjct: 705 ATGIAPDRLELEITESFVMFERERSFKLLADLRALGVQLSIDDFGTGYSSLAYLQQLEVH 764 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID SF + + N+++ +IA+G L +E++AEGVE EQA +L ++QG Sbjct: 765 KLKIDISFVRNMTRNRGNASIVKAVIAMGHSLGLEVIAEGVEEIEQAAHLLALQCDVMQG 824 Query: 496 YLYAQPMPLRDFPKWLAGSQP 516 YL ++P+P+ D + L +P Sbjct: 825 YLVSKPLPVDDITRLLESFEP 845 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 136/258 (52%), Gaps = 5/258 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + R ++ L ++E L+ QP+++ S GVE LLRW +P Q I+PD FI Sbjct: 620 SAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFIN 679 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYW-F 378 +AEE LI+P+ +V+ Q + + V IN++ FR LIK++++ Sbjct: 680 LAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSE 739 Query: 379 SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + + + LEITE + +++ + L + ++IDDFGTG SS S+L+ Sbjct: 740 TGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHT 799 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + +D + T+ IIA+ L +E++AEG+E +EQ +L + QGY Sbjct: 800 LKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGY 859 Query: 497 LYAQPMPLRDFPKWLAGS 514 +++P+ + + L S Sbjct: 860 YFSKPVTVSEIELMLMNS 877 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 137/257 (53%), Gaps = 5/257 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T+ R+ ++ L + +F L QP +N ++Q G+E L+RW +P G +SP FIPI Sbjct: 425 TSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPAKFIPI 484 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LI+ + +V+ + Q ++ V +N++ F++ + + + Sbjct: 485 AEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTKILAET 544 Query: 381 HP-IQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + Q L LEITE + ++++ I +L V +++DDFGTG SS +L+ + + + Sbjct: 545 NLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQIPFNTI 604 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + + + ++A+G+ N+ ++AEGVETQ Q + LR+ +QG+ Sbjct: 605 KIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEEMQGFK 664 Query: 498 YAQPMPLRDFPKWLAGS 514 +++P+ +L+ Sbjct: 665 FSKPLKPEAAANFLSNH 681 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 139/262 (53%), Gaps = 7/262 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R + L + +F L+ QP ++ + G E L+RW +P +G + P FI Sbjct: 516 AVTLRADLEAALRTALEEEQFVLYLQPQIS-EDVRVTGAEALIRWQHPTRGLVMPGEFIA 574 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW- 377 +AE+ +IVP+ +V+ +Q ++ P + + +NV+ F + ++ + Sbjct: 575 VAEDCGMIVPIGNWVLNTACKQLALWATQPAFAHMTIAVNVSAKQFHQHDFVEQVLDALS 634 Query: 378 FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 L +EITE + +VD I EL V A+DDFGTG SS ++L+ L D Sbjct: 635 RHGAQASGLKIEITESMLIANVDDVIVRMEELQHHGVGFAMDDFGTGYSSLTYLKRLPLD 694 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 VLKID+SF + D ++ + ++I+AL + + ++AEGVET EQ +YL RHG H QG Sbjct: 695 VLKIDQSFVRDVLVDTNDAAIANMIVALANSMGLSVIAEGVETVEQMQYLARHGCHAYQG 754 Query: 496 YLYAQPMPLRDFPKWLAGSQPP 517 YL+++P+P+ F LA P Sbjct: 755 YLFSRPVPVERFETSLADFLRP 776 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 89/253 (35%), Positives = 147/253 (58%), Gaps = 7/253 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R + ++ GLA+ E ++ QP+++ + +G E L+RW +P++G I P FIP Sbjct: 593 AVNARSNLEADLRQGLARAELLVYYQPVVD-HQARLMGAEALVRWRHPQRGMIGPADFIP 651 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKD-LNQYW 377 +AE+ LI+PL +YV+ Q + P ++ + +NV+ FR+ + L+Q Sbjct: 652 LAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQFRQPGFVAQVLHQLK 711 Query: 378 FSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 ++L LE+TE L D++ IAR +L + V A+DDFGTG SS S+L+ L D Sbjct: 712 SHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSLSYLKRLPLD 771 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+SF + +D ++ + I+AL + L++++VAEGVET Q +L+ HG QG Sbjct: 772 QIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQLHGCEGFQG 831 Query: 496 YLYAQPMPLRDFP 508 YL+ +P+P+ F Sbjct: 832 YLFGRPVPMEVFA 844 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 6/260 (2%) Query: 262 ATAYR-MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 A + R + + L +++F L QP L+ + + +G E L+RW +P+ G PD FI Sbjct: 785 ARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFI 844 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 PIAE + I+P+ +V+ +RQ ++ + + +N++ FR L + + Sbjct: 845 PIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILE 904 Query: 379 SAH-PIQQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A + L LE+TE A+ + + EL +K ++++IDDFGTG SS ++L+ Sbjct: 905 EAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVY 964 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + +D + + +I+L L + VAEGVET+EQ ++LR G +QG Sbjct: 965 SLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQG 1024 Query: 496 YLYAQPMPLRDFPKWLAGSQ 515 Y ++P+ ++ Sbjct: 1025 YYLSRPLQADAVFSFIEDDH 1044 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 86/263 (32%), Positives = 136/263 (51%), Gaps = 5/263 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 L RM + L + EF L QP++NAR + +G E LLRW++P +G I PD+FI Sbjct: 468 LKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDMFI 527 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW- 377 +AEE IVPL +V+ R+ + + F + +NV+ F + + Sbjct: 528 QVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCSIIR 587 Query: 378 FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + L LE+TE ++DV+ +L ++ + IDDFG G SS +L+ D Sbjct: 588 ETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPID 647 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+SF + S A + + + IIA+ RL +++VAEGVET EQ +L+ G H +QG Sbjct: 648 RIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQG 707 Query: 496 YLYAQPMPLRDFPKWLAGSQPPP 518 + + +P+ F L + P Sbjct: 708 FYFHRPLSEELFKTLLWEIKDHP 730 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 8/276 (2%) Query: 252 SLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQ 311 + + R++ + L +++ L QP ++ Q+ +GVE+LLRW++P Sbjct: 482 FAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWHHPEL 541 Query: 312 GWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVL 369 G +SP FIP+AEE LI+P+ R+V+ RQ + + HV +N++ F L Sbjct: 542 GQVSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDPGL 601 Query: 370 IKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSF 426 L S ++L LE+TE + + I EL V+L+IDDFGTG SS Sbjct: 602 THHLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDFGTGYSSL 661 Query: 427 SWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 + L+ D LKID++F + I +DA + +T+ IIA+ ++L++ +VAEGVET +Q +L Sbjct: 662 AQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFLA 721 Query: 487 RHGVHILQGYLYAQPMPLRD---FPKWLAGSQPPPA 519 R G ++QGY Y+ P+ F + PP A Sbjct: 722 RCGSELIQGYFYSPPLAAEALHSFSRMFDSDAPPVA 757 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 88/272 (32%), Positives = 143/272 (52%), Gaps = 5/272 (1%) Query: 256 GYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWIS 315 L + RMS ++ L + ++EFEL+ QP + S Q +G E L+RW++P++G ++ Sbjct: 342 AAGMQLYSLDRMSLETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWHHPQRGLLT 401 Query: 316 PDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDL 373 P FI IAEE LIV + ++V++E RQ + + +N++ F + + Sbjct: 402 PIHFIEIAEETGLIVAIGQWVISEACRQHQAWLQEGFQPMRISVNISAMQFYQSDFCDMV 461 Query: 374 NQYWFSAH-PIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLE 430 L E+TE + D D R +L R +KLAIDDFGTG S+ S+L Sbjct: 462 EHILKETRINPAYLEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTGYSNLSYLR 521 Query: 431 TLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGV 490 D LK+D+SF I + +N + I+AL + +++ELVAEGVET + + G Sbjct: 522 KFPIDRLKVDQSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVELHWAESSGC 581 Query: 491 HILQGYLYAQPMPLRDFPKWLAGSQPPPARHN 522 +QGY ++QP+P F +W+ + +H+ Sbjct: 582 TFVQGYRFSQPLPAEKFTRWVREYKYQANQHS 613 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 84/253 (33%), Positives = 133/253 (52%), Gaps = 5/253 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 R++ + I GL EF +F QP ++ + Q G+E L+RW P + P FIP+A Sbjct: 467 TRRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLEFIPVA 526 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMS-SQFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 E+ L+V L V+ + Q + + +N++ F + L+ + S Sbjct: 527 EDTGLVVALGERVLRDACIQTRRWTDELGPLRIAVNISARQF-QPDLLDRVQAALAESGL 585 Query: 382 PIQQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P QL LEITE + D I L + + +AIDDFGTG+SS +L+ D +KI Sbjct: 586 PPSQLELEITETTMMRDLPTSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKI 645 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + D ++T+ I+ +G+ L++ +VAEGVET +Q +LR HG +QGY Y+ Sbjct: 646 DRSFVRDVPGDEGDATIVSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYS 705 Query: 500 QPMPLRDFPKWLA 512 +P+P F W+ Sbjct: 706 KPLPADGFADWMR 718 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 151/259 (58%), Gaps = 7/259 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 M E+ + EF ++ QP+++ + + +G E LLRW +P +G ISP F+ +AEE Sbjct: 569 MQMETELRRAAEREEFLVYYQPIVDLATLKMVGFETLLRWQHPERGIISPGEFMAVAEET 628 Query: 327 HLIVPLTRYVMAETIRQRHVF----PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 LI+P++ +VMAE RQ + P S + +G+N++ HF++ L+ +L + Sbjct: 629 GLILPISWWVMAEACRQMQRWAVIFPRSRKLRIGVNLSGRHFQQADLLPNLRSILAETGF 688 Query: 382 PIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P Q+L LE+TE + + + IA E+ + +++DDFGTG SS S+L D LKI Sbjct: 689 PAQRLCLEVTEGILIDNKEVAIATLEEIRAMGIGVSMDDFGTGYSSLSYLHRFPIDTLKI 748 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D++F +A+ S+ ++T+ I+ L L +++VAEG+ET+EQ + L+ G + QGY +A Sbjct: 749 DRTFISALNSEESSATIVHAILMLAHSLRLQVVAEGIETREQYRALQALGCNYGQGYFFA 808 Query: 500 QPMPLRDFPKWLAGSQPPP 518 +P+ R K LA PP Sbjct: 809 RPLSARQVEKLLARQSLPP 827 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 81/250 (32%), Positives = 135/250 (54%), Gaps = 7/250 (2%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R + ++ L + E L+ QP ++++ +G E L+RW +P+QG +SP FI +AEE Sbjct: 983 RAAMEEDLRQALRRDEMRLYYQPQVDSQ-GSLLGAEALVRWEHPQQGLLSPAAFIELAEE 1041 Query: 326 HHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAH 381 LI+P+ +V+ Q + P ++ + +NV+ + I + + Sbjct: 1042 TGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKETGA 1101 Query: 382 PIQQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 Q L LE+TE + +++ I + L V ++DDFGTG SS ++L+ L LKI Sbjct: 1102 NPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKI 1161 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + D+ ++++ IIALG L IE+VAEGVE+ EQ ++L +HG QGYL+ Sbjct: 1162 DRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFG 1221 Query: 500 QPMPLRDFPK 509 +P P + Sbjct: 1222 RPQPAEQLER 1231 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 80/254 (31%), Positives = 132/254 (51%), Gaps = 5/254 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + + + Q + ++ QP ++ S + G+E LLRW +P G+ISP VFIPI Sbjct: 679 ALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPI 738 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AEE LI + +V+ ++ Q ++ + +N++ ++ + Sbjct: 739 AEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREA 798 Query: 380 AHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L+LEITE + + +I +L V+LA+DDFGTG SS S L+ L D L Sbjct: 799 GLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSL 858 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I +D ++++ L LN+++ AEGVETQEQ ++R QGYL Sbjct: 859 KIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYL 918 Query: 498 YAQPMPLRDFPKWL 511 +++P+P + K+ Sbjct: 919 FSRPIPASEVVKYF 932 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 87/255 (34%), Positives = 136/255 (53%), Gaps = 5/255 (1%) Query: 269 FSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHL 328 ++ +A HE EL+ QP ++ ++ Q GVE L+RW P G I PD FIPIAE+ L Sbjct: 441 LENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFIPIAEDCGL 500 Query: 329 IVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQ 385 I+P+ +V+ Q + + +N++ FR+ + + + Sbjct: 501 ILPIGEWVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTTLEETGLAPDS 560 Query: 386 LILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSF 443 L LE+TE + D + REL V L++DDFGTG SS S+L+ L DV+KID+SF Sbjct: 561 LELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSF 620 Query: 444 TAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 + + A +++T IIA+ + L++E VAEGVET+ Q +L RH H +QGY ++ P+ Sbjct: 621 LDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVT 680 Query: 504 LRDFPKWLAGSQPPP 518 + L+ P Sbjct: 681 GDEIADMLSAGSQLP 695 >UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASF8_PELPD Length = 1023 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 10/278 (3%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R + + + EF L QP + + GVE L+RW P +G I PD FI + Sbjct: 378 AMERFAIETCMLRAIDAGEFFLCYQPKVEIHDMKLTGVEALVRWQRPGEGVIPPDRFIAL 437 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQFH--VGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE+ +IV L +++ E RQ + + V +N++ R ++ + + + Sbjct: 438 AEENGMIVRLGGWILGEACRQNRAWQDAGLPRTVVSVNISARQLRENSFVEQVERILEET 497 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE + + D + + L + V +++DDFGTG SS S+L+ L D + Sbjct: 498 GLEPCYLDLELTESVVMANSDEIVQKLTRLKQLGVGISVDDFGTGYSSLSYLKHLPVDTI 557 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 K+D+SF I D + + + +IA+G L + ++AEGVET EQ ++LR + QGY Sbjct: 558 KVDRSFVRDIVHDPDDKAIVEAVIAMGHALGLTVIAEGVETLEQLEFLRSQNCNQAQGYY 617 Query: 498 YAQPMPLRDFPKWLAGSQP----PPARHNGHITPIMPL 531 +++P+ ++L+ PPA+ ++P PL Sbjct: 618 FSKPLDSGHLARFLSKHCQEMSFPPAKAL-PLSPTAPL 654 >UniRef50_B2JUW5 Diguanylate phosphodiesterase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JUW5_BURP8 Length = 529 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 127/476 (26%), Positives = 205/476 (43%), Gaps = 10/476 (2%) Query: 37 SQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV-LLPLIGLPCSVAHLPLRKQAAKLQT 95 + + ++R A V +D++L + + + L L G PC + L + + Sbjct: 42 ADQAAIRERESLIAGDMVASIDRILDSVISRAHSGLATLPGRPCPLVEHRLSELQTYVLY 101 Query: 96 VRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPA 155 VRS+ LV + +YCSS G ++P+ L+ PA L L PV+ + P Sbjct: 102 VRSVNLVANQNIYCSSALGSIDMPLAAYLSLAPARIE-LDLIAGTPQQPREPVMPLYVPT 160 Query: 156 AGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENY 215 S + G++ ++ L L + L V L G V S + Sbjct: 161 --SKDTGLLYVVEARYLADTLAHGVRYEAGQVVLVVSNARALDAYGEVISAESAAKWKGT 218 Query: 216 QVSSQRFPFTINVNGPGA--TALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREI 273 + SS R+ F+I V A T W Y A+L++LL+ +A A R + Sbjct: 219 RASSARWAFSIVVVAAPAFVTQTHWKYGLLASAAAILVNLLIAAAYLIAFAPRRLLLSAV 278 Query: 274 NLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLT 333 L + QP++ +++ +GVE L+RW +PR G +SP F+ E L+ +T Sbjct: 279 RRALKHGQLHFAYQPVVEIATRRIMGVEALIRWTHPRWGAVSPAAFMTEVERSSLLASVT 338 Query: 334 RYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITER 393 R+ + + + +NVAP R + D+ + L+LE+TER Sbjct: 339 RFALQRATEEIMRKTELRPLRIAVNVAPMDLERKDFVADVLAVHATLPADITLVLEVTER 398 Query: 394 DALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + I L + V+ AIDDFGT +S+ L D +KID F + D Sbjct: 399 FLIDKHPRTDVIFNLLKAQGVRFAIDDFGTQHSNLDLLGRFPFDYVKIDGEFVRQV--DK 456 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 + I A+ + +E++AEGVETQ Q + LR G+ QGYLY +P+P Sbjct: 457 QGGELIRAIAAVSKHYGMEVIAEGVETQAQHEALRSLGIPYGQGYLYQRPVPASRL 512 >UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria RepID=A6SW06_JANMA Length = 459 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 86/275 (31%), Positives = 145/275 (52%), Gaps = 9/275 (3%) Query: 243 TQLPLAVLLSLLVGYIAWLAT--AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 T + ++ LL + + + R ++ L ++ L+ QP + +G Sbjct: 160 TWIHNILVCGLLWTLLWVMQADLSERNVMEADLRKALQDNQLMLYYQPQ-TGNDGRIVGA 218 Query: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGI 357 E LLRW +P +G +SP FIP+AE+ LI+P+ +V+ Q + P ++Q + I Sbjct: 219 EALLRWRHPVKGMVSPADFIPLAEQTGLILPIGHWVLGMACAQLISWSKHPATAQLSLAI 278 Query: 358 NVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKL 414 NV+ F++ + + S L LE+TE + DV+ IA+ L K ++L Sbjct: 279 NVSALQFKQPDFVSQVVSVLDRSGADPHLLELELTESMLVNDVNDIIAKMNALKEKGLRL 338 Query: 415 AIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAE 474 ++DDFGTG SS S+L+ L D LKID+SF + D+ + T+ ++ L + + + ++AE Sbjct: 339 SLDDFGTGYSSLSYLKKLPLDQLKIDQSFVRDMLFDSNDVTIVRTVVELARGMGLHVIAE 398 Query: 475 GVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPK 509 GVETQEQ ++L G QGYL ++P+P +F Sbjct: 399 GVETQEQRQFLAELGCLSFQGYLLSRPVPNAEFEA 433 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 89/261 (34%), Positives = 142/261 (54%), Gaps = 6/261 (2%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 R ++ + L + E+ QPL+ ++ + +G E L+RW +P +GW+SP FIPIA Sbjct: 579 QARKVVEHDLRVALGTDQLEMHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIA 638 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFR-RGVLIKDLNQYW-FS 379 E LIVPL R+++ + Q + + + +N++P F+ L+ + + Sbjct: 639 ERTDLIVPLGRWILHRSCLQGRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQT 698 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P QL LEITE A+ +V+ + R+L V ++IDDFGTG SS ++L+ D L Sbjct: 699 GFPPDQLQLEITEGIAMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKL 758 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF IG N+ V + I+ LG L + EGVET EQ +L+ HGV QG+ Sbjct: 759 KIDRSFVVDIGLHPDNAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFY 818 Query: 498 YAQPMPLRDFPKWLAGSQPPP 518 +A+ +P +F +++ P P Sbjct: 819 FAKALPPDEFARFVREKSPWP 839 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 96/250 (38%), Positives = 143/250 (57%), Gaps = 6/250 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ LA +FE++ QP + R Q +G E LLRWN+P +G + P FI +AEE Sbjct: 703 LEMETQLRDALALEQFEVYYQPQYDMRDQTLVGAEALLRWNHPERGMVPPGDFIALAEET 762 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 IVP+ +V+ + RQ + V +N++ + FR L + L Q S P Sbjct: 763 GAIVPIGEWVLMQVCRQNRQWMDEGLTPVRVAVNISIAQFRS-NLSQTLEQVLEQSGMPA 821 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LEITE + D + I EL K + ++IDDFGTG SS S+L L D LKID+ Sbjct: 822 ELLELEITESMLMEDEEETITLLNELKEKGLHISIDDFGTGYSSLSYLRKLPVDKLKIDR 881 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF A + + ++ +T IIALGQ +++ ++AEGVE +EQ +L +H +I QG+LYA+P Sbjct: 882 SFIAHVVHNQSDAAITGSIIALGQNMDLRILAEGVEHEEQRDFLLQHRCYIAQGFLYARP 941 Query: 502 MPLRDFPKWL 511 M DF + L Sbjct: 942 MTAEDFVRLL 951 >UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XQ65_SYNP2 Length = 570 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 90/252 (35%), Positives = 140/252 (55%), Gaps = 5/252 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 R R++ L + E ELF QP ++ ++ G E LLRW + G+ISP +FIPIA Sbjct: 311 RSRFQLERDLYRALEREELELFYQPQIDVKTGNITGAEALLRWRHHEHGFISPGIFIPIA 370 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 E LI+ ++ +V+ Q + + V +N++ F++ L+ D+++ ++ Sbjct: 371 EASDLIINISDWVLKTACYQNQQWTKDGFPELCVAVNLSGKQFQQPQLVDDVSKILKETS 430 Query: 381 HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 QL LEITE + ++ + +LH + A+DDFGTG SS S+L+ D LK Sbjct: 431 LKPSQLELEITEGLLINNIQNAVKTLEDLHNLGLITALDDFGTGFSSLSYLKRFSLDYLK 490 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF I D + +T+ IIAL L IE++AEGVET EQ YL+ G + LQGY Y Sbjct: 491 IDQSFVRGIPLDKDDVAITNSIIALAHSLQIEVIAEGVETIEQVNYLKSVGCNKLQGYYY 550 Query: 499 AQPMPLRDFPKW 510 ++P+ +DF + Sbjct: 551 SRPICAKDFAEL 562 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 132/256 (51%), Gaps = 6/256 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R++ +++ + + EF L QP S IG E LLRW +P++G ++P FIP+ Sbjct: 485 ALERLALENDLHRAVERGEFRLMFQPQFE-GSGSIIGAEALLRWQHPQRGLVTPAEFIPV 543 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LIVP+ +V+ +Q + + + V +N++ F + L++ + + S Sbjct: 544 AEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLLAVS 603 Query: 380 AHPIQQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE + D + EL V++AIDDFGTG SS S+L + L Sbjct: 604 NIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPISKL 663 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +T II L + LN+ ++AEGVET +QA +L+ QG+ Sbjct: 664 KIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHF 723 Query: 498 YAQPMPLRDFPKWLAG 513 ++QP+ F + L Sbjct: 724 FSQPVSPEKFAELLRA 739 >UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT96_SHESA Length = 519 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 149/487 (30%), Positives = 219/487 (44%), Gaps = 15/487 (3%) Query: 34 RFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKL 93 + L + + +E L+ +L E + L C +R + Sbjct: 41 SYFIAVYLAHNKATEIGEFNLERLEAILKLSDQIGEYAMNLTEEDCGKLTEYMRFR---- 96 Query: 94 QTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWT 153 R + L D + YCSS G N+P+ +L + + G P +I Sbjct: 97 PYFRGVLLFNDKSFYCSSTTGDLNLPLNTLLPVDRLKDGSQHIVPETPARPGVPAIITTF 156 Query: 154 PAAGSSNAGVMEMINIDLLTAMLLEPQ--LPQISSASLTVDKRHLLYGNGLV-DSLPQPE 210 + G + + L ++P + + L + L + + Sbjct: 157 KNEQT-QYGAVVVFEGQYLIDSFIQPDVFPRAVKTVVLGLHGATLPAAPQFSGNEVITVF 215 Query: 211 DNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFS 270 + ++V Q F + ++ W LPL L +L + W R S + Sbjct: 216 AGDKFEVH-QDFVILLEISKALFWHFYWIAFGLLLPLIFTLFVLSSLLFWKRNG-RHSLA 273 Query: 271 REINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIV 330 +I G+ EF L QP++++ + GVE L+RW +P+ G + PD+FIPIAEE LIV Sbjct: 274 DDIKSGIENQEFFLVYQPVVSSEDGKAKGVEALVRWQHPQMGLVRPDLFIPIAEESQLIV 333 Query: 331 PLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLN--QYWFSAHPIQQLIL 388 PLT Y+ + ++S F +G NVAP HF + + + F+ +Q L + Sbjct: 334 PLTNYIFERALADFRQLQLTSDFRIGFNVAPEHFIQSDIEAKFRYLRDAFAEIGVQPL-I 392 Query: 389 EITERDALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAI 447 EITER L D+ RIA L + +AIDDFGTG ++ S L+T D LKIDK F I Sbjct: 393 EITERQLLTVDMCERIA-ALRELGILVAIDDFGTGQTTLSLLQTFTLDYLKIDKCFIDTI 451 Query: 448 GSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 G D+V S V D II L ++N VAEGVETQEQA YL VH LQGYLYA+PM L + Sbjct: 452 GQDSVTSHVLDTIIELCHKMNYVAVAEGVETQEQADYLISRDVHFLQGYLYAKPMKLNEL 511 Query: 508 PKWLAGS 514 WL Sbjct: 512 ELWLKEH 518 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 85/256 (33%), Positives = 130/256 (50%), Gaps = 5/256 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 ++ + L + E E+ QP ++ ++Q+ +GVE L+RW++P G I P FIPIA Sbjct: 841 TEQLMLESALRHALERGELEMHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFIPIA 900 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 EE LIV L ++ + + + + +N++P F LI D+ S Sbjct: 901 EELGLIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQFESRTLIADIQAVLEASG 960 Query: 381 HPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LEITE + + ++ + R + V LAIDDFGTG SS S+L+ +K Sbjct: 961 LEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVK 1020 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + DA + D II L L +++VAEG+ET Q YLR HG QGY Sbjct: 1021 IDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWL 1080 Query: 499 AQPMPLRDFPKWLAGS 514 +P+P + ++A Sbjct: 1081 CKPVPADEVRNFMARH 1096 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 135/263 (51%), Gaps = 4/263 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + + R + S + G+ + EF + QP + ++ IG+E L+RWN+P G ISP FIP Sbjct: 557 SVSRRSNLSMALRKGIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPELGMISPGEFIP 616 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWF- 378 IAEE I L +V+ E RQ + + F V +N++ F + L + +++ Sbjct: 617 IAEETGSIHRLGEFVLNEACRQNKAWQDASIPPFRVAVNISAVQFAQKDLPEVVSRALAA 676 Query: 379 SAHPIQQLILEITERDALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 S Q L LE+TE D EL V L+IDDFGTG SS S+L+ D L Sbjct: 677 SGLEAQYLELELTESVIQSADRAIETMHELVALGVHLSIDDFGTGYSSLSYLKLFPIDTL 736 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+ FT I SD ++ + II + L++ ++AEGVET+ Q +L+ + QGY Sbjct: 737 KIDQHFTKNIESDEKDAALVKTIIRMAHELDLNVIAEGVETENQVAFLKAESCNQAQGYF 796 Query: 498 YAQPMPLRDFPKWLAGSQPPPAR 520 Y +P+P + + + + Sbjct: 797 YNRPLPAEEIEVFFQQYKKASSS 819 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 140/260 (53%), Gaps = 7/260 (2%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 +A R + + + + +F L Q + + G E+LLRW +P +G +SP +FI Sbjct: 694 IALRERAAIEEALRYAIEEEQFLLHYQAQI-GEDGRIEGAEVLLRWQHPERGMVSPAIFI 752 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYW 377 P+AEE IV L +V+ + Q + P+ + + +NV+ R+ ++ + Sbjct: 753 PLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQLRQPDFVEQVTTVL 812 Query: 378 FSAH-PIQQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRP 434 A +L LE+TE + DV+ IA+ L + ++DDFGTG SS S+L+ L Sbjct: 813 REAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTGYSSLSYLKRLPL 872 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 LKID+SF + DA + + ++AL + L + ++AEGVET+ Q + L G H Q Sbjct: 873 SQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEAQRELLAGIGCHCYQ 932 Query: 495 GYLYAQPMPLRDFPKWLAGS 514 GYL+++P+P+ DF + ++G+ Sbjct: 933 GYLFSRPLPIGDFERLVSGA 952 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 7/256 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + R++ E+ + + + +F L+ Q +++ + +G E L+RW NP G + P FIP Sbjct: 331 SINARITLENELRIAIEKSQFHLYYQIQMDS-DNRVLGAEALIRWTNPEHGLVLPATFIP 389 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFP---MSSQFHVGINVAPSHFRRGVLIKDLN-QYW 377 IAEE LI+ + ++V+ Q V+ + + +NV+ FR+ + + Sbjct: 390 IAEETGLILSIGKWVIETACAQIKVWQKKSQTRDLTLAVNVSAKQFRQKDFVDQVQSAVQ 449 Query: 378 FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A P L LE+TE D + I + L++ V+ ++DDFGTG SS +L+ L D Sbjct: 450 RHAIPGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSSLQYLKRLPLD 509 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 KID+SF I +D + + IIA+ Q L+I+++AEGVET+EQ + L G + QG Sbjct: 510 QFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLLLGKGCTLYQG 569 Query: 496 YLYAQPMPLRDFPKWL 511 YL+++P+P+ F + Sbjct: 570 YLFSKPIPIDQFDALI 585 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 91/256 (35%), Positives = 139/256 (54%), Gaps = 5/256 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R E+ LA+ +FELF QP ++ RS Q + VE L+RWN+P G ++P FIP Sbjct: 636 AHERFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVGFIPT 695 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LIVP+ +V+ E RQ + V +NV+ F L++ + + Sbjct: 696 AEETGLIVPIGDWVLHEACRQNKAWQDLGLEPITVSVNVSARQFSEKNLVERVVHALSES 755 Query: 381 HPIQQ-LILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE + DV + +L V+++IDDFGTG SS S L+T L Sbjct: 756 DLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTFPIARL 815 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KIDKSF + ++ + V +I+LGQ+L + ++AEGVET EQ +LR++ +QGY Sbjct: 816 KIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQGYH 875 Query: 498 YAQPMPLRDFPKWLAG 513 +++P+ R+ + L Sbjct: 876 FSKPVCSREIERLLES 891 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 132/259 (50%), Gaps = 5/259 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R++ + L L+ QP + + + +G E LLRW +P +G ISP FIP Sbjct: 630 AARERLALEARLRRALELGHMRLYYQPQIELATGRLVGAEALLRWLDPEEGLISPARFIP 689 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-F 378 +AE +I PL +V+ E RQ + + + +NV+ F + + Sbjct: 690 VAENSGVIGPLGLWVLGEACRQGQQWRAAGLPDLAIAVNVSLHQFLLTDIAGATAEALNK 749 Query: 379 SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S P L LEITE + + L ++LAIDDFGTG SS + L+ D+ Sbjct: 750 SGFPASLLELEITESALAEKPEEALAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDL 809 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+ F I A + T++ +IALG + ++++AEGVETQEQ +L++ G QGY Sbjct: 810 LKIDQGFIRDIPHSADDMTISSSVIALGHAMGLKVLAEGVETQEQLSFLQQKGCDYFQGY 869 Query: 497 LYAQPMPLRDFPKWLAGSQ 515 ++P+P DF + L ++ Sbjct: 870 FCSRPLPAEDFTRLLEKTR 888 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 93/271 (34%), Positives = 143/271 (52%), Gaps = 9/271 (3%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + R+ + + EF L QP ++ + + IG+E L RWNNP G +SP FIP+ Sbjct: 448 SLQRLILETHLRKAFEKEEFFLHYQPQIDCVTNRIIGLEALARWNNPELGLVSPGSFIPL 507 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 AEE LI+ L R+V+A +Q + + V +N++ HF + L K + Q Sbjct: 508 AEETGLIIALDRWVLATVCKQLEAWQAAGIPLVRVAVNLSARHFLKANLNKTIQQIRSRG 567 Query: 381 HPIQ-QLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L LEITE + + + + L V ++IDDFGTG SS S+L L L Sbjct: 568 AAARDHLDLEITEGMLMENAEEVVSVLGMLQETGVNISIDDFGTGYSSLSYLTRLPFHTL 627 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + G + +++V IIAL L E+VAEGVET Q ++L+ +G ++QGYL Sbjct: 628 KIDRSFISQSGDNVESASVVTAIIALAHSLGKEVVAEGVETSTQLQFLKENGCRVIQGYL 687 Query: 498 YAQPMPLRDFPKWLAGSQPP----PARHNGH 524 +++P+P + L + P P R +G Sbjct: 688 FSRPLPEDKIRELLREGRIPGAVEPVREHGR 718 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 5/252 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + R++ ++ L + E +L+ QP++ A + + VE LLRW +P G +SP FIP+ Sbjct: 598 SLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPL 657 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AE+ LIVP+ +V+ + + H+ +N++ FR + + Sbjct: 658 AEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAET 717 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE + D D +AR L V LAIDDFGTG SS ++L+ D L Sbjct: 718 GMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDEL 777 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+ F I + ++ + I++LG L + +VAEGVET LRR G + QG+ Sbjct: 778 KIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFH 837 Query: 498 YAQPMPLRDFPK 509 ++ P+P +F K Sbjct: 838 FSPPLPWEEFVK 849 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 86/254 (33%), Positives = 143/254 (56%), Gaps = 7/254 (2%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 + R ++ LGL +++F L+ QP +N + + IGVE L+RW +P +G ++P FIP+A Sbjct: 779 SARAEMEADMRLGLQENQFLLYYQPQVN-HAGRLIGVEALVRWQHPLRGLVAPAHFIPLA 837 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSSQ---FHVGINVAPSHFRRGVLIKDLNQYWF-S 379 E+ LI+PL ++VM RQ ++ + + +NV+ F + D+ + Sbjct: 838 EDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIAVNVSALQFHGESFVSDVLATLART 897 Query: 380 AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P +L LE+TE + DVD IA+ L V ++DDFGTG SS S+L+ L D + Sbjct: 898 GAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVGFSLDDFGTGYSSLSYLKRLPLDQI 957 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + S+ ++ + +A+G+ L + ++AEGVETQ Q +L G QGY Sbjct: 958 KIDQSFVSDALSNPKDAALVRATVAMGRGLGMMVIAEGVETQMQRDFLEGEGCLNFQGYF 1017 Query: 498 YAQPMPLRDFPKWL 511 + +P+P+ + +L Sbjct: 1018 FGRPVPVAELACFL 1031 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 133/256 (51%), Gaps = 6/256 (2%) Query: 262 ATAYR-MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 A + R + + + L +++ L QP ++ + + GVE LLRW++P G +SP FI Sbjct: 496 AQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFI 555 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AE+ I+P+ +V+ + Q + + +N++ FR+ L++ +++ Sbjct: 556 PVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLA 615 Query: 379 S-AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 L LE+TE A+ D IA +LH K V+L++DDFGTG SS S L+ + Sbjct: 616 EYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIY 675 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + D + + II + Q L + AEGVET Q +LR G QG Sbjct: 676 RLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQG 735 Query: 496 YLYAQPMPLRDFPKWL 511 + +++P+ ++L Sbjct: 736 FYFSRPLGAPHLQQYL 751 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 96/264 (36%), Positives = 142/264 (53%), Gaps = 4/264 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + + L ++EF L QP+++ R Q IG E LLRWNNP G +SPD FI I Sbjct: 1074 AQSRLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISI 1133 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDL-NQYWFSA 380 AEE LI L +V+++ ++ + V +N++P FR L++ + N + Sbjct: 1134 AEETGLISELGAWVISQACQEVVNWQTQGSPIWVAVNLSPRQFRESKLLEIISNAITLNG 1193 Query: 381 HPIQQLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LEITE+ L D I +LH + +L+IDDFGTG S+ S+L + LK Sbjct: 1194 ITNHYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLK 1253 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF A I + + IIA+G L ++++AEGVET EQA L G QGY + Sbjct: 1254 IDRSFIADIPHNQEVLALVKTIIAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFF 1313 Query: 499 AQPMPLRDFPKWLAGSQPPPARHN 522 ++P+ +F ++L Q P A N Sbjct: 1314 SRPLLSEEFRRYLQSHQNPQAAIN 1337 >UniRef50_B7KEZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=3 Tax=Cyanothece RepID=B7KEZ6_CYAP7 Length = 589 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 80/254 (31%), Positives = 134/254 (52%), Gaps = 5/254 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ L ++E E+ QP L+ S + +G E L RW +PR+G +SP +FIPIAEE Sbjct: 330 LELEADLRHALERNELEVHYQPRLSLSSGEIVGAEALTRWYHPRRGLVSPGIFIPIAEET 389 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ 384 LI P+ +V+ Q ++ V +N++ F + L + + + Sbjct: 390 GLIEPIGEWVLRTACEQSKIWQEKGLGLIRVAVNLSGRQFNQLNLSQWVAKILRETKINS 449 Query: 385 QL-ILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE + + I +L VK+AIDDFGTG SS S+L+ D+LKID+ Sbjct: 450 HLLELELTESILVENASESIQKLNDLKTLGVKIAIDDFGTGYSSLSYLQQFPFDILKIDR 509 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 F I ++ N+ +T II L +L + +VAEG+ET+ + +L+ H +QGYL+++ Sbjct: 510 CFVRNIDQNSKNAAITQAIIFLAHQLGLTVVAEGIETKSELSFLQNHQCDEMQGYLFSRS 569 Query: 502 MPLRDFPKWLAGSQ 515 + +F + + Sbjct: 570 VKASEFEHLVQSRK 583 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 134/247 (54%), Gaps = 8/247 (3%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 ++ L+ + EL QP ++ IG E LLRW +P +G +SP FIP+AE+ Sbjct: 634 RMDADLRFALSNQQLELHYQPQYRCQT--LIGAEALLRWKHPDRGMVSPAEFIPLAEDTG 691 Query: 328 LIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPI 383 LI+P+ +V+ + +Q + P +++ + +NV+ F + ++ + Q + Sbjct: 692 LILPIGEWVIRQACKQLQQWQERPETAELFIAVNVSARQFCQDNFVESVRQLLNTYGVSA 751 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 ++L LE+TE L+DV+ I + L ++ A+DDFGTG SS S L+ L D +KID+ Sbjct: 752 EKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALDDFGTGYSSLSHLKRLPLDQIKIDR 811 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + D +S + IIA+GQ L + ++AEGVET EQ +L +QG+L +P Sbjct: 812 SFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEGVETDEQLAFLTELDCLDIQGFLLGRP 871 Query: 502 MPLRDFP 508 + F Sbjct: 872 SSIDKFE 878 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 85/250 (34%), Positives = 126/250 (50%), Gaps = 6/250 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R + + L EF L QP + S + G E LLRW +P +G++SP FIPI Sbjct: 697 ARSRHALEHNLRGALEAREFHLVFQPQVRLESSELTGFEALLRWKHPSRGFVSPAEFIPI 756 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS-AH 381 AEE+ LIVP+ +V+ +P V +N++P FR L + Sbjct: 757 AEENGLIVPIGEWVLRTACATAASWP---DVTVAVNLSPVQFRARGLAAMVTSALAEAGL 813 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 P Q+L LE+TE L D + I +L V++++DDFG G SS S+L D +KI Sbjct: 814 PPQRLELEVTETALLDDSEATIEILHQLRALGVRVSLDDFGVGYSSLSYLRKFPFDRIKI 873 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF +G + + I +LG L +E AEGVET+EQ ++R G +QGY + Sbjct: 874 DRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEGVETEEQLDFVRECGCTAVQGYYFG 933 Query: 500 QPMPLRDFPK 509 +P P + + Sbjct: 934 RPCPAAEVAR 943 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 138/258 (53%), Gaps = 5/258 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 R + +A +E L+ QP ++ S Q +GVE L+RW +P G ++PD FIP Sbjct: 970 LVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIP 1029 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS 379 IAEE +I+P+ ++V+ + Q + + +N++ R+ ++ D+ Sbjct: 1030 IAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTK 1089 Query: 380 -AHPIQQLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 L LEITE A+ + + ++ EL + ++LAIDDFGTG SS S+L+ L D Sbjct: 1090 HKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDR 1149 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LK+D+SF I SD ++ ++ I++ L + +VAEGVE + Q L G ++QGY Sbjct: 1150 LKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGY 1209 Query: 497 LYAQPMPLRDFPKWLAGS 514 +++P+ D +++ + Sbjct: 1210 YFSKPLAADDCFRFIERN 1227 >UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6G7_9BACL Length = 700 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 84/260 (32%), Positives = 138/260 (53%), Gaps = 10/260 (3%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T ++ ++ L + EF L QP + + + +G+E L+RWN+P++G I P FIP+ Sbjct: 442 TQAKVELENDMRKALEREEFFLEFQPQIRLDTGKMVGMEALVRWNHPKRGLIPPSEFIPL 501 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AEE LIVPL +V+ + + M V +N++ FR+ L + +N Sbjct: 502 AEESGLIVPLGEWVLKTACQYNKKWQMDGFEPVCVSVNLSMRQFRQYNLAEHVNAILREV 561 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L LE+TE D++ + L R + ++IDDFGTG SS +L++L D L Sbjct: 562 GLDPQYLELEVTESMT-YDIETALDQLHRLKRLGIHISIDDFGTGYSSLYYLKSLPIDRL 620 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID++F + D ++ + I + L +++ AEGVE +EQ ++L+R H QGYL Sbjct: 621 KIDRAFVKEVMYDGNDAAIVSTITTMAHHLKLKVTAEGVENEEQLEFLKRQRCHEGQGYL 680 Query: 498 YAQPMPL----RDFPKWLAG 513 +++P+ +F LAG Sbjct: 681 FSKPVSAGVLESEFLSRLAG 700 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 92/260 (35%), Positives = 143/260 (55%), Gaps = 5/260 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + A R+ E+ + E L QP ++A S+Q +G+E L+RW +P +G I P FI Sbjct: 676 IQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPTRGVIPPGEFI 735 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LIVPL V+ Q + Q V +N++P F+ LI+ +++ Sbjct: 736 PLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEPNLIEKVSEILR 795 Query: 379 -SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + P L LEITE A+ DVD I ++L V+++IDDFGTG SS S+L+ Sbjct: 796 KTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYSSLSYLKKFPLH 855 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF +G D +++ II++ + + + +VAEGVET +Q ++LR +QG Sbjct: 856 ALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEFLRGQECQQVQG 915 Query: 496 YLYAQPMPLRDFPKWLAGSQ 515 + ++P+P DF L Q Sbjct: 916 FFLSKPLPPSDFLALLERQQ 935 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 85/252 (33%), Positives = 134/252 (53%), Gaps = 5/252 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R R++ LA+ FE++ QP+ + + + G E LLRWN+P +G++SP FIPIAEE Sbjct: 703 RRIMERDLRDALAREAFEVYYQPIYSLETDRICGFEALLRWNHPVRGFVSPAEFIPIAEE 762 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQ 384 LIVPL +V+ + +P + V +NV+ F L+ + + + P + Sbjct: 763 LGLIVPLGEWVLRRACEEAARWPD--ELKVAVNVSAVQFTSASLVTAVREALRRTGLPGR 820 Query: 385 QLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 +L LEITE + + I L V++A+DDFGTG SS S+L + D +KID+S Sbjct: 821 RLELEITETVLVANPGATTAILHSLRALGVRVAMDDFGTGYSSLSYLRSFPFDKIKIDQS 880 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F + + +I LG L + AEGVET+ Q +LR G +QGYL+++P+ Sbjct: 881 FVRDLCVKDGTDFIVRAVIGLGASLGMTTTAEGVETEAQLAHLRAEGCDEVQGYLFSRPV 940 Query: 503 PLRDFPKWLAGS 514 P+ + + Sbjct: 941 PVSEVASVIRRW 952 >UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1L5_DESAC Length = 1018 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 95/263 (36%), Positives = 148/263 (56%), Gaps = 5/263 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 RMS + + + EFEL+ QP +N + +G E LLRW + R G + PD FIPIAE Sbjct: 746 ERMSLAEMLREAVDNGEFELYYQPKINLKDGMVVGAEALLRW-HSRDGMVPPDRFIPIAE 804 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMS-SQFHVGINVAPSHFRRGVLIKDLNQYWFSA-HP 382 + LI+P+ +V+ + Q H++ +FH+G+N++P+ F L + + A P Sbjct: 805 QTGLILPIGEWVLLQACEQAHIWRQEYPEFHMGVNLSPAQFDLDYLPRLVADILKEAQLP 864 Query: 383 IQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 + L LEITE + D+D I R L V+++IDDFGTG SS S+L L D+LKID Sbjct: 865 AEALELEITEGMIIEDIDNTVQILRSLRDLGVEISIDDFGTGYSSLSYLTRLPLDILKID 924 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF + ++ V I+AL + LN+++ AEGVET++ L H +QGY ++ Sbjct: 925 RSFMFEVPDSRDSTNVVLSILALARSLNLKVTAEGVETEDHVTLLHDHRCTYIQGYFCSR 984 Query: 501 PMPLRDFPKWLAGSQPPPARHNG 523 P+P+ +F +++ Q A G Sbjct: 985 PLPVAEFEEFMRHRQCRCANCEG 1007 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 89/268 (33%), Positives = 146/268 (54%), Gaps = 10/268 (3%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + + + L + EF L QP +N + + +G+E L+RW +P G +SP FI Sbjct: 615 MNAKEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFI 674 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 PIAEE LIV L +V+ +Q ++ V IN++ F + L++ + Q Sbjct: 675 PIAEETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIE 734 Query: 379 S-AHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 S QQL LEITE A+ ++++ I L V +A+DDFGTG SS ++L+ L + Sbjct: 735 STGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFN 794 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + + + + + +IALG+ L++++VAEGV+ +EQ + LR I+QG Sbjct: 795 TLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQG 854 Query: 496 YLYAQPMPLR---DFPK--WLAGSQPPP 518 YL+++P+ + D + WL +Q Sbjct: 855 YLFSRPLSVDSTTDILQANWLQRNQSQS 882 >UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 Tax=Comamonas testosteroni RepID=D0IZ49_COMTE Length = 1115 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 92/274 (33%), Positives = 149/274 (54%), Gaps = 13/274 (4%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R + +++ GL EFELF QP + + IG E LLRW +P +G++ P FIP Sbjct: 843 ALQERRTLEQDMRAGLQAGEFELFYQPQVEM--GKVIGAEGLLRWKHPEKGFVPPAHFIP 900 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AEE +I+PL +V+ +Q + P +Q + +NV+P F + ++ + + Sbjct: 901 LAEETGVILPLGDWVLQAACQQLAKWAKHPRYAQLVLSVNVSPKQFHQSGFVEQVLKALA 960 Query: 379 S-AHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 ++L LE+TE + DVD IA+ L + ++DDFGTG SS S+L+ L D Sbjct: 961 EHGADARRLKLELTEGMLVSDVDDTIAKMMRLKSYGIGFSLDDFGTGYSSLSYLKRLPLD 1020 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + +D ++ + I+AL + L++ ++AEGVETQ Q ++L + QG Sbjct: 1021 QLKIDRSFVRDVLTDPNDAAIARTIVALAKSLSLHVIAEGVETQAQCRFLEGIRCYAWQG 1080 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIM 529 YL + P+P+ +F + P G TP + Sbjct: 1081 YLMSPPVPVSEFESLVTNGNVP-----GSPTPAL 1109 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 82/270 (30%), Positives = 138/270 (51%), Gaps = 7/270 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A A R R++ + E L+ QP ++ + + +G E L+RW +P +G + P+ FIP Sbjct: 436 AEAARRDLERDLRQAIEGDELILYYQPQVSTGTGRLLGFEALVRWEHPTRGLVPPNAFIP 495 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SA 380 +AEE LI+PL +V+ R+ + + V +N++P F++ L + + + Sbjct: 496 LAEESGLILPLGEWVLRAACREAARW--AHPLKVAVNLSPRQFQQADLPERVLAILTETG 553 Query: 381 HPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 +L LEITE + D+ I R L V +A+DDFGTG SS + L+ D +K Sbjct: 554 LAPTRLELEITETLIINDMARALGILRRLKAFGVSIAMDDFGTGYSSLATLQAFPFDKIK 613 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + + + ++ LG+ L + +VAEGVET Q ++L QGYL Sbjct: 614 IDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDAQMRFLAAEACDEAQGYLI 673 Query: 499 AQPMPLRDFPKWLAGSQP--PPARHNGHIT 526 ++P P+ F + + + PP R + + Sbjct: 674 SKPQPIERFAEQIDAPETFVPPGRPDAAVA 703 >UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae RepID=C6UPQ0_ECO5T Length = 536 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 131/506 (25%), Positives = 226/506 (44%), Gaps = 30/506 (5%) Query: 21 ICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCS 80 + ++ + + F + A +++LD V ++ +++ L+ PC Sbjct: 41 VLIIIPGILGVLLSFAMSVFQMNRDTTITAGILLKQLDNVTQIVKHTTKLTSILVMKPCK 100 Query: 81 VAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILA---ELPAPQPLLRLT 137 L A VR+ GL+++ CSS+ G++ + V D+ + + Sbjct: 101 DILEQLIANGALTPYVRTTGLIENNFQICSSVSGFKKMNVNDVYGTSFHNKNKESRIVSI 160 Query: 138 IDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTV------ 191 + + G ++ P ++ ++ + ++ S SL Sbjct: 161 SGTSFVPGKTAIVFLMP--IGNDMTAFSIVESRYIYDLMDVLDDENDDSFSLRFTEGPAI 218 Query: 192 -----DKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLP 246 + L +S +P+ I+ + LP Sbjct: 219 ISGVNNNDRLYMLKKDFNSAISQASLTVTTPMISLYPYVIS------------NVFYILP 266 Query: 247 LAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 L++LLS ++ ++ + +MS + EI G++ EF + QP+ + ++ C+GVE L+RW Sbjct: 267 LSILLSFILYFLWQRWISRKMSLAEEIKKGMSSGEFSVHYQPVCDTTTKACLGVEALMRW 326 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRR 366 ISP VFI AEE +LI+PLT+++ I+ + + FH+GIN+A H Sbjct: 327 QREDGKNISPVVFIRAAEEENLIIPLTKHLFELIIQDVQSWKVKKPFHLGINIAAEHLAH 386 Query: 367 GVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNS 424 + D+ + ++LEITER+ + D D+ + EL + A+DDFGTG Sbjct: 387 PDFVADVLHIKNAISDKFNIVLEITERNLVEDTDHALQKINELRSHGCEFAVDDFGTGYC 446 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 S L+ L D LKIDKSF + + + V DIII L RLN+ +AEGV T QA+Y Sbjct: 447 SLGLLQKLSVDYLKIDKSFIDTLTTAEDETPVLDIIIKLSNRLNLITIAEGVSTSHQAEY 506 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPKW 510 L + V ++QGYLYA+PM +F +W Sbjct: 507 LIHNNVTLVQGYLYAKPMKATEFYQW 532 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 85/254 (33%), Positives = 140/254 (55%), Gaps = 7/254 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + A R + EI L ++F+L+ QP ++ R+ + G E L+RW +P +G ISP FIP Sbjct: 604 SAAQRFALQNEIREALLFNQFKLYYQPQVD-RTGRITGAEALIRWLHPERGMISPMDFIP 662 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLI-KDLNQYW 377 IAEE LI+PL +++ +Q + P+++ + INV+ F++ + + L Sbjct: 663 IAEESGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQQPDFVTQVLAAVT 722 Query: 378 FSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + QL LE+TE + I + L +K ++DDFGTG SS S+L+ L + Sbjct: 723 RTGANPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLPIN 782 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKIDKSF I +D ++ + ++I L Q + + ++AEGVETQ Q +L + G QG Sbjct: 783 ELKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQG 842 Query: 496 YLYAQPMPLRDFPK 509 Y + +P+ +F + Sbjct: 843 YYFGKPVGAEEFLR 856 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobac... 583 e-165 UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2... 516 e-145 UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erw... 476 e-132 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 473 e-132 UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae Re... 469 e-131 UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=R... 468 e-130 UniRef50_D0Z7I3 EAL domain protein n=1 Tax=Edwardsiella tarda EI... 466 e-130 UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0... 466 e-130 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 466 e-129 UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria R... 465 e-129 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 465 e-129 UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobac... 464 e-129 UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI 463 e-129 UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=... 460 e-128 UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomon... 460 e-128 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 459 e-127 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 458 e-127 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 455 e-126 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 453 e-126 UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio ... 449 e-125 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 449 e-125 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 449 e-124 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 449 e-124 UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 T... 448 e-124 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 448 e-124 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 447 e-124 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 447 e-124 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 446 e-123 UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6... 445 e-123 UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domai... 445 e-123 UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya Re... 444 e-123 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 444 e-123 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 443 e-123 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 443 e-123 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 443 e-122 UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA 442 e-122 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 442 e-122 UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter ro... 441 e-122 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 440 e-122 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 440 e-122 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 439 e-122 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 439 e-121 UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya da... 439 e-121 UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteo... 439 e-121 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 438 e-121 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 438 e-121 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 438 e-121 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 438 e-121 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 437 e-121 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 436 e-121 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 436 e-120 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 436 e-120 UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila ... 435 e-120 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 435 e-120 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 435 e-120 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 435 e-120 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 435 e-120 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 434 e-120 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 434 e-120 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 434 e-120 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 434 e-120 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 434 e-120 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 434 e-120 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 434 e-120 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 434 e-120 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 433 e-120 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 433 e-119 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 433 e-119 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 433 e-119 UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2V... 433 e-119 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 432 e-119 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 432 e-119 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 432 e-119 UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domai... 432 e-119 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 431 e-119 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 431 e-119 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 431 e-119 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 431 e-119 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 430 e-119 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 430 e-119 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 430 e-119 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 430 e-119 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 429 e-119 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 429 e-118 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 429 e-118 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 429 e-118 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 429 e-118 UniRef50_A8FYM5 Signal transduction protein containing a membran... 429 e-118 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 429 e-118 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 429 e-118 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 429 e-118 UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9X... 428 e-118 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 428 e-118 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 428 e-118 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 428 e-118 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 428 e-118 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 428 e-118 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 428 e-118 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 428 e-118 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 428 e-118 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 428 e-118 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 427 e-118 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 427 e-118 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 427 e-118 UniRef50_C1DB08 Predicted signal transduction protein containing... 427 e-118 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 427 e-118 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 427 e-118 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 427 e-118 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 427 e-118 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 426 e-118 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 426 e-118 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 426 e-118 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 426 e-117 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 426 e-117 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 426 e-117 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 426 e-117 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 426 e-117 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 425 e-117 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 425 e-117 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 425 e-117 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 425 e-117 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 425 e-117 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 425 e-117 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 425 e-117 UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 425 e-117 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 425 e-117 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 424 e-117 UniRef50_B8GNC0 Signal transduction protein containing a membran... 424 e-117 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 424 e-117 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 424 e-117 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 424 e-117 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 423 e-117 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 423 e-117 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 423 e-117 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 423 e-117 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 423 e-116 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 423 e-116 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 423 e-116 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 423 e-116 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 423 e-116 UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 423 e-116 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 423 e-116 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 423 e-116 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 422 e-116 UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/P... 422 e-116 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 422 e-116 UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='N... 422 e-116 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 421 e-116 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 421 e-116 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 421 e-116 UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n... 421 e-116 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 421 e-116 UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae Re... 421 e-116 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 421 e-116 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 421 e-116 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 421 e-116 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 421 e-116 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 421 e-116 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 421 e-116 UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria R... 421 e-116 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 421 e-116 UniRef50_Q220B0 Response regulator receiver modulated diguanylat... 420 e-116 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 420 e-116 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 420 e-116 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 420 e-116 UniRef50_B7KEZ6 Response regulator receiver modulated diguanylat... 419 e-115 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 419 e-115 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 419 e-115 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 419 e-115 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 419 e-115 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 419 e-115 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 419 e-115 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 419 e-115 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 419 e-115 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 419 e-115 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 419 e-115 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 419 e-115 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 419 e-115 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 419 e-115 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 418 e-115 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 418 e-115 UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 418 e-115 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 418 e-115 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 418 e-115 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 418 e-115 UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 418 e-115 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 417 e-115 UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromob... 417 e-115 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 417 e-115 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 417 e-115 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 417 e-115 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 417 e-115 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 417 e-115 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 417 e-115 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 416 e-115 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 416 e-115 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 416 e-115 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 416 e-115 UniRef50_A8VZA5 Signal transduction protein containing a membran... 416 e-114 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 416 e-114 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 416 e-114 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 416 e-114 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 416 e-114 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 416 e-114 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 416 e-114 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 415 e-114 UniRef50_A0YP68 Hybrid signal transduction histidine kinase and ... 415 e-114 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 415 e-114 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 415 e-114 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 415 e-114 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 415 e-114 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 415 e-114 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 414 e-114 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 414 e-114 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 414 e-114 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 414 e-114 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 414 e-114 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 414 e-114 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 414 e-114 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 413 e-114 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 413 e-114 UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholde... 413 e-114 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-114 UniRef50_C5D169 Diguanylate cyclase/phosphodiesterase with extra... 413 e-114 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-114 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 413 e-113 UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT... 413 e-113 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-113 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 412 e-113 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 412 e-113 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 412 e-113 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 412 e-113 UniRef50_Q0KC83 Predicted signal transduction protein containing... 412 e-113 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 412 e-113 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 412 e-113 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 412 e-113 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 412 e-113 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 412 e-113 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 411 e-113 UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae Rep... 411 e-113 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 411 e-113 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 411 e-113 UniRef50_Q2SF23 Predicted signal transduction protein containing... 411 e-113 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 411 e-113 UniRef50_Q3JAB6 Response regulator receiver modulated diguanylat... 411 e-113 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 411 e-113 UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/P... 411 e-113 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 411 e-113 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 411 e-113 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 411 e-113 Sequences not found previously or not previously below threshold: >UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobacteriaceae RepID=YOAD_ECOLI Length = 532 Score = 583 bits (1504), Expect = e-165, Method: Composition-based stats. Identities = 532/532 (100%), Positives = 532/532 (100%) Query: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV Sbjct: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 Query: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV Sbjct: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 Query: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ 180 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ Sbjct: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ 180 Query: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY 240 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY Sbjct: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY 240 Query: 241 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV Sbjct: 241 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 Query: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA 360 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA Sbjct: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA 360 Query: 361 PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG 420 PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG Sbjct: 361 PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG 420 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE Sbjct: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 Query: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR 532 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR Sbjct: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR 532 >UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2_SERP5 Length = 538 Score = 516 bits (1329), Expect = e-145, Method: Composition-based stats. Identities = 223/517 (43%), Positives = 312/517 (60%), Gaps = 1/517 (0%) Query: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 M Q + YR R ++ L L +L R+ + +Q A V +++ + Sbjct: 1 MLMTQLAVSKYRYYRWLLAGAVGLAILLLSLYTRYYQEIGTIEQNRQVLATRTVAKINDL 60 Query: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 L P + +E +PL+G C LR +AA+ Q +R++ LV+DG +YCSS+FG R Sbjct: 61 LTPAKQQAERSMPLLGSTCEEVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLF 120 Query: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNA-GVMEMINIDLLTAMLLEP 179 IL + L L ++ KG P LI WTPA +N+ GV+ + NI+LL LLEP Sbjct: 121 STILPSVANDGAKLVLRPSLSVAKGVPTLIMWTPAQPDNNSNGVLHVFNIELLANFLLEP 180 Query: 180 QLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWH 239 Q P L V L YG + + Y S R+PF+I++ GP A+ LA Sbjct: 181 QEPYAQRVVLNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALA 240 Query: 240 YLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIG 299 LP +PL++L+SLL Y+ +L TA RMS S I +++ EF ++CQP++NA + +C+G Sbjct: 241 ALPRHIPLSLLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVG 300 Query: 300 VEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINV 359 VE+LLRW N RQGWISPDVFIP+AE+H LI+ LTRY+M+ + +FP F++ INV Sbjct: 301 VEMLLRWKNKRQGWISPDVFIPLAEQHGLIIALTRYLMSTVVENLQLFPPRPSFYISINV 360 Query: 360 APSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDF 419 A HF +I D+ + W AHP+ L+LE+TER AL ++ Y + L + LAIDDF Sbjct: 361 AAEHFNGVTIIDDIRRLWLPAHPMPSLMLELTERTALSEIQYEQIKTLKEMGIMLAIDDF 420 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GTG+SS S+L+ L PDVLKID+ FTAAIG+DA+N+TVTD II L RL ++LVAEGVET Sbjct: 421 GTGHSSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETA 480 Query: 480 EQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQP 516 EQA YLR V+ LQG+ +A+PMP+ FP WL + Sbjct: 481 EQADYLRSRDVNALQGFYFAKPMPINVFPLWLQQYES 517 >UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erwinia tasmaniensis RepID=B2VJL5_ERWT9 Length = 523 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 148/517 (28%), Positives = 238/517 (46%), Gaps = 17/517 (3%) Query: 11 YRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV 70 + R ++ + L+ L L FI R ++ A + + + + ++ Sbjct: 9 HERLWLV---VAGLLPLLLCLFFTFIEARQTGARQQEMTAAALLSQAEHISDLAWDMTDS 65 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAE-LPA 129 L PC L+K A RS+GL QD T+YCSS FG PV ++ LPA Sbjct: 66 LQTFSNRPCKDIRSQLQKLGALNPYFRSVGLTQDNTVYCSSAFGATRGPVAGMIRHALPA 125 Query: 130 PQPLLR--LTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSA 187 P ++ P +I G G +++ L ++ L Sbjct: 126 PGQSWWTLSLAGTFGVQDRPAVIFMRQTPGK--TGSYAVVDGQYLIDLMRATGLKLGYHI 183 Query: 188 SLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATAL--AWHYLPTQL 245 ++ + + ++ + S +P I+++ P L L T + Sbjct: 184 TMRFGGGYQIANAAPLNPQQANWKTRTFNSGSSHYPIAISISAPRTETLQNWRQVLLTFM 243 Query: 246 PLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLR 305 P+AV+LS+L + R S+ E+ G+A EF + QP+ N + Q GVE L+R Sbjct: 244 PMAVILSVLFVAVTNSWLRRRSSYRDELRRGMAFGEFSVHYQPVCNLVNGQLAGVEALMR 303 Query: 306 WNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFR 365 W W+ PD+FI AE +IV LTR+++ + + + + FH+GINVA H + Sbjct: 304 WQRSDGSWVRPDIFIAAAEAEGMIVQLTRHLLQLIAKDCASWKVPAGFHIGINVAADHLQ 363 Query: 366 RGVLIKDLNQY---WFSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFG 420 +KD+ + P + LE+TER + + D EL + +++AIDDFG Sbjct: 364 HEDFVKDIRGFSQNIAHLLP--TITLELTERSLISEGDLVAHRLAELRSEGIRVAIDDFG 421 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 TG+ S ++L+T D LKIDKSF AI S + + D II L RL +++VAEG+ET Sbjct: 422 TGHCSLTYLQTFPLDYLKIDKSFVNAIESADGETPILDTIIQLAHRLALQVVAEGIETPL 481 Query: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 Q +YL+ HGV +QG+ YA+P+ W+ + PP Sbjct: 482 QMEYLKNHGVVFIQGFYYARPLSSAALMVWIEQNPPP 518 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 473 bits (1217), Expect = e-132, Method: Composition-based stats. Identities = 92/278 (33%), Positives = 144/278 (51%), Gaps = 5/278 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R+ ++ + + EF L QP L+ R+ + +GVE L+RW +P G Sbjct: 679 FYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGM 738 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 I P FI +AEE LIVP+ +V+ E RQ V+ + +N++ F + L++ Sbjct: 739 IPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLE 798 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + P Q L +E+TE + DVD+ I REL V+L+IDDFGTG SS S+ Sbjct: 799 SIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSY 858 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ DVLKID+SF I +D ++ + II+L L + ++AEGVET+EQ YL++H Sbjct: 859 LKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQH 918 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHIT 526 +QGY +++P+ L + G + Sbjct: 919 DCDQIQGYFFSRPITADAMEVMLKDDKRLQTVSIGSLI 956 >UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae RepID=C8QG51_9ENTR Length = 534 Score = 469 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 140/521 (26%), Positives = 229/521 (43%), Gaps = 13/521 (2%) Query: 11 YRRNR---MIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAG 67 RRNR ++ L+ L + I R+ Q+ + AN + + +++ Sbjct: 4 QRRNRDFGWLLIVCAGLLPLVLGILCTAIEARHTVHQQQINTANSLLAQAERMSDSAWDM 63 Query: 68 SEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAEL 127 L PCS L+++ RSIG ++ + CSS +G + +++ Sbjct: 64 ITDLRQFHYQPCSAIEGKLQREGNLNAYFRSIGKLEGDNVTCSSAYGMYPGTLSEMILRQ 123 Query: 128 PAPQPLLRL---TIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQI 184 P + P +I G +I+ L + + Sbjct: 124 PPVTGKAWWSISLRGTYGVPDRPAVIFVRQLPDGE--GFWAVIDGQYLMDFMRALGESRN 181 Query: 185 SSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATAL--AWHYLP 242 ++ + + + +E S R+P ++ V P + L L Sbjct: 182 YHMTMRFNDGAPITSGPVEVQPEIWLKSEPLLAQSSRYPISVEVVVPPSELLKAWRQALF 241 Query: 243 TQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEI 302 LP+A + S+L+ + R+S+ EI + +F + QP+ + Q C GVE Sbjct: 242 IFLPMAAIFSILLMILTANWLRRRISWRDEIRRAMRNRQFSVHYQPVYSVAEQHCNGVEA 301 Query: 303 LLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPS 362 LLRW+ P I PD+FI AEE +IVPLTR+++ + ++ FH+G+N+A Sbjct: 302 LLRWHLPNGDTIRPDIFISAAEEEGMIVPLTRHLLELMAEDIQSWQVAPGFHIGLNLAAE 361 Query: 363 HFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDY--RIARELHRKNVKLAIDDF 419 H + +KD+ + + Q+ LE+TER + D + R R L + +++AIDDF Sbjct: 362 HLQHPDFVKDIELFARRVQDKKLQITLELTERSLIHDGEDVARKLRLLQSQGMRVAIDDF 421 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GTG+ S S+L T D LKID+ F AI + V D II L ++L +E++ EGVET Sbjct: 422 GTGHCSLSYLLTFPLDYLKIDRGFINAIERLDGETPVLDAIINLARKLQLEVLGEGVETS 481 Query: 480 EQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPAR 520 Q +YL++ GV +QGY YA PM WL P R Sbjct: 482 LQFQYLQQRGVLFIQGYYYAWPMDNDRLRTWLNEQGQQPLR 522 >UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=RTN_ECOLI Length = 518 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 141/513 (27%), Positives = 250/513 (48%), Gaps = 10/513 (1%) Query: 11 YRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV 70 + R ++ C + ++ ++F+ + ++ + + LD L++ ++ Sbjct: 8 FGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR 67 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 L PL C A+ L +AA VR+ LV+D +CSS G ++P+ +++ L Sbjct: 68 LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDIN 127 Query: 131 QPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASL 189 + + + + ++ P ++ W N+GV +N++L ++ + +L Sbjct: 128 KNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVAL 187 Query: 190 TVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAV 249 + L + + ++ + D + P T+ + T W+ + L Sbjct: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT---WNDVWYAFLLGG 244 Query: 250 LLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNP 309 + +VG + + + RM REI + + +F + QP+++ ++ + G+E+LLRW +P Sbjct: 245 MSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 Query: 310 RQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRG 367 G I PD FI AE +IVPLT+++ R GIN+AP H Sbjct: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 Query: 368 VLIKDLNQYWFSAHPIQQ--LILEITERDALLDVDYR-IARELHRKNVKLAIDDFGTGNS 424 D+ + ++ P ++LEITERD L + + + LH V++AIDDFGTG+S Sbjct: 365 SFKADIQKLL-TSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHS 423 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 + +LE D LKID+ F AIG++ + S V D ++ L +RLN+ VAEGVET EQA++ Sbjct: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 L GV+ +QGY ++P+PL DF +WL P Sbjct: 484 LSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 >UniRef50_D0Z7I3 EAL domain protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z7I3_EDWTE Length = 588 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 200/532 (37%), Positives = 303/532 (56%), Gaps = 7/532 (1%) Query: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV 60 M + +K YR R ++ + +L+ R+ + QQ A A+ +L+++ Sbjct: 48 MLFSHITMKRYRLYRALLAITIGALVCIISLASRYQQELTTVQQMQRNAATIAITQLERI 107 Query: 61 LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV 120 L + S+ + + C L A L+T+R++ LV+DG + CS++ + Sbjct: 108 LSRAETVSKNNIGWVNQRCEEISPHLTNMAIHLETIRAVLLVKDGIVTCSNLINQPIKSL 167 Query: 121 VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ 180 I E+ + + L L R L +GSP+L+ W P + +G++ + NI L+A +L P+ Sbjct: 168 RAIYPEMLSAKDTLVLRAARLLNRGSPILLFWRPDQANPTSGMVYIFNIATLSAFILAPR 227 Query: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPED---NENYQVSSQRFPFTINVNGPGATALA 237 P + +L V L + + V + + ++ S R+PF+I++ P A LA Sbjct: 228 PPYVDYMALNVAGHTLRFNDMRVRAPTDAAEAETPPRLELRSSRYPFSISLFSPAARDLA 287 Query: 238 WHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC 297 LP +PLA+LL LL + +LA+A RMS + I + + + L+CQP+++ S +C Sbjct: 288 LQRLPRHIPLALLLFLLASILTYLASANRMSLAYPIAQAIRRRQLTLYCQPIIHTESGRC 347 Query: 298 IGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGI 357 GVEILLRW NPR GW SP++FIP+AE++ LIVPLTRY++ QRH FP F+ I Sbjct: 348 EGVEILLRWYNPRHGWTSPEIFIPLAEQNGLIVPLTRYLLEALAAQRHHFPHDRDFYFSI 407 Query: 358 NVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAID 417 NVA HF +G L D+ W P Q+L+LE+TER L DY L + LA+D Sbjct: 408 NVAAEHFAQGKLALDIQNLWLRHRPQQRLMLELTERTRLPSQDYPQLHILREMGLSLALD 467 Query: 418 DFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVE 477 DFGTG+SS S+L+ L+P++LKID++F A IGSDA+N+ V D++I L ++L + LV EGVE Sbjct: 468 DFGTGHSSLSYLQDLQPEMLKIDRAFCATIGSDAINARVLDLMIDLARQLRLRLVMEGVE 527 Query: 478 TQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIM 529 +QA YLR+ V+ +QGYL+A+PMPLRDFP W A Q R G TP Sbjct: 528 QTQQADYLRQRQVYAMQGYLFARPMPLRDFPGWHAHYQ----RQCGDSTPAA 575 >UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0KNV8_AERHH Length = 510 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 156/489 (31%), Positives = 247/489 (50%), Gaps = 17/489 (3%) Query: 33 VRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAK 92 + +Q + HA E L++ L + ++ +G PC LR Q A Sbjct: 32 IVSWQTFAGMKQDAEERLLHAREMLERTLDHAHQAAAMVQGSVGRPCEEVVQGLRDQVAT 91 Query: 93 LQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQW 152 + VR++ L + +YCSS++G P L L + G P+++ Sbjct: 92 VPDVRTVNLAKGEVVYCSSLYGPYQGPFK----LADYANGQLDLMRGNPVTPGRPLVVYR 147 Query: 153 TPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDN 212 P V+ I+ L +L L + S +L + + +L + D +P Sbjct: 148 QPVGE---YSVLVGIDGYYLHNILD--MLSRNSPLTLVIGAQSMLADGQIHDEVPPVA-L 201 Query: 213 ENYQVSSQRFPFTIN--VNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFS 270 + + +S ++PF + ++ + W+Y L + LL LL G + + S S Sbjct: 202 GSLEQTSGKYPFRVVTDLSHDEYGSHIWNYSRASLIIYPLLGLLAGCLVYWLAGRSTSPS 261 Query: 271 REINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIV 330 +E+ L Q EF + QP++ G E+L+RW +PRQG ISPD FIP+AE+ LIV Sbjct: 262 QELRRALDQREFIPYLQPVVTGDDAHWSGCEVLMRWQHPRQGLISPDRFIPLAEDSGLIV 321 Query: 331 PLTRYVMAETIRQ--RHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAH-PIQQLI 387 P+TR +M + Q V + FH G N++ SH + L++D + + +L+ Sbjct: 322 PMTRLLMEQVREQFAGRVHSLPRGFHFGFNISASHCKDMSLLEDCRDFINAFRENPIKLV 381 Query: 388 LEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTA 445 LE+TER+ + + R+ ELH+ V +AIDDFGTG+SS ++L+ + D LKID+SF Sbjct: 382 LELTERELIVADETTDRLFAELHQLGVFIAIDDFGTGHSSLTYLQQFQVDFLKIDQSFVG 441 Query: 446 AIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLR 505 IGSDA++S + + +I L RL + LVAEGVE + QA YLR V+ LQGYLY +PMP++ Sbjct: 442 MIGSDALSSHIVENVIDLATRLGLLLVAEGVENEVQAAYLRARQVNFLQGYLYGRPMPMK 501 Query: 506 DFPKWLAGS 514 +F LA Sbjct: 502 EFAGLLAQG 510 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 92/342 (26%), Positives = 159/342 (46%), Gaps = 15/342 (4%) Query: 183 QISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPF--TINVNGPGATALAWHY 240 ++ + +V + + + F +I + Sbjct: 595 GGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAES 654 Query: 241 LPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNA 292 L A+ + T R + L + EF ++ QP + Sbjct: 655 LLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEI 714 Query: 293 RSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS- 351 + + +GVE L+RW +P++G ISP FIP+AEE LI+P+ +++ Q + Sbjct: 715 HTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGF 774 Query: 352 -QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYR--IAREL 407 V +N++ F + L + ++ + Q L LEITE A+ DV + EL Sbjct: 775 SPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIEL 834 Query: 408 HRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRL 467 + + LAIDDFGTG SS ++L+ L D+LKID+SF + +++ + + II LG L Sbjct: 835 RKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNL 894 Query: 468 NIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPK 509 +++VAEGVET+EQ +LR+ ++QGYL+ +P+P+R+ + Sbjct: 895 KMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELEQ 936 >UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria RepID=A4SI84_AERS4 Length = 527 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 154/519 (29%), Positives = 250/519 (48%), Gaps = 27/519 (5%) Query: 1 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ---RVVQFANHAVEEL 57 M + R + +V + L + + ++ ++ A+ A+ + Sbjct: 1 MHFFYIDLSR----RWLRLCCALMVFILPLLVGGWATHKSYMEELESGSAAAAHKAMTLM 56 Query: 58 DKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRN 117 + +L + + +LPL+G PC + LR+Q A + VRS+ LV++G LYC+S+FG Sbjct: 57 ENMLDHAERANRQVLPLVGAPCDEINFQLREQVALVPFVRSVNLVKEGMLYCTSLFGS-- 114 Query: 118 VPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLL 177 V ++ P L L + P+LI + ++ + I+ + L+ ML Sbjct: 115 --VREVDDASPYIARKLLLMRGNQVRANHPLLIVRSEQGRNA---ALSAIDGEYLSVMLT 169 Query: 178 EPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALA 237 + + V +D P +++S +PF+I + T Sbjct: 170 LSH--HAGNLFMRVGSTWFDEAGHYLDKAPDLHALARTELTSPHYPFSI--HAGYVTLAY 225 Query: 238 WHYLPTQLPLAVLL----SLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNAR 293 WH L L + L SL + W S E+ L EFE + QPL+ Sbjct: 226 WHSLWDHKSLILSLLCGLSLAFALLVWWLLGRPGSPVGELRRALRAKEFEPYLQPLVTTS 285 Query: 294 SQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPM--SS 351 + +GVE+L+RW +P G I PD+FIP AEE LIVP+T +M + + Sbjct: 286 DTRLMGVEVLMRWQHPNSGLIRPDLFIPQAEESGLIVPMTTLIMKKVAQVLSREQARLPD 345 Query: 352 QFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDAL--LDVDYRIARELH 408 FH+ N++ +H R L+++ + P + L+LE+TER+ L + R+L Sbjct: 346 GFHISFNISAAHCRDLALLQECRTFLAQFAPGKIVLVLELTERELLVVDPNTLSLFRQLD 405 Query: 409 RKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLN 468 + VKLAIDDFGTG+SS +L+ D LKID+SF IG+++++ + +I LG RL Sbjct: 406 QMGVKLAIDDFGTGHSSLFYLQQFHVDYLKIDQSFIGRIGTESLSEHIVANVIDLGARLG 465 Query: 469 IELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 + L+AEGVE++ QA YLR GV +QGYL+ +PMPL+ F Sbjct: 466 LLLIAEGVESELQAAYLRAKGVDYMQGYLFGRPMPLQHF 504 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 139/268 (51%), Gaps = 5/268 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + R+S ++ + EF L QP ++ R+ + GVE L+RWN+P G Sbjct: 621 FYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGL 680 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP FIP+AEE LIVP+ +V+ Q + + + +N++ FR+ LI Sbjct: 681 VSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIA 740 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSW 428 + + + Q L LE+TE + + + I REL + +++AIDDFGTG SS S+ Sbjct: 741 MVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSY 800 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ LKID++F + D ++T+ II + L ++ +AEGVE EQ +L RH Sbjct: 801 LKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRH 860 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQP 516 +QGY +++P+ + + LA + Sbjct: 861 QCEEMQGYYFSRPITAEELGRLLADGKT 888 >UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobacteriaceae RepID=A8GGV3_SERP5 Length = 528 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 144/514 (28%), Positives = 248/514 (48%), Gaps = 14/514 (2%) Query: 10 TYRRNRMIVCTICALVTLAS--TLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAG 67 ++RR ++ ++ ALV +++ I+ + QR V+ L Sbjct: 12 SHRRRSLVKSSVVALVFFILFMGITLSLINHQRTQYQRAVEQRTQKFTL--DTFNNLTQI 69 Query: 68 SEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAEL 127 + L+PL PCS + + QAA VR+ LV++G YCSS G + + +I E+ Sbjct: 70 MQRLMPLTEQPCSSSQPEITYQAAFHAGVRTFMLVKNGFAYCSSATGDMMLALKNIYPEI 129 Query: 128 PAPQPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISS 186 Q L L+L L+ G P W AG + G++ ++I L+ + + Sbjct: 130 DQRQRLDLKLQQGTPLVPGKPAFAVWLRQAGKEDTGILATLDIGLMPQQMFGTSPERAPG 189 Query: 187 ASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLP 246 ++ + R L + + + Q D + ++S P I T L Sbjct: 190 IAIILGDRALTSFSPNLMPVNQLPDEKADRISIAGTPMIIMFYNQKLTPNDIR---LTLL 246 Query: 247 LAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 +++LSL++G + + R S R + G+ ++EF + QP+ + ++ G+E L+RW Sbjct: 247 GSLVLSLMIGVLCYYMLLLRQSPERALMRGIKRNEFFIEYQPVFHTKTGTIAGLEALIRW 306 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHF 364 +P +G I PD+FIP AE LIVPLTR++ + +G+N++PSH Sbjct: 307 QHPIEGRIPPDLFIPYAESEGLIVPLTRHLFRLIAEDAPRLATALPQGAKLGLNISPSHL 366 Query: 365 RRGVLIKDLNQYWFSAHPIQQ--LILEITERDALLDV-DYRIARELHRKNVKLAIDDFGT 421 +D+ + P L+ EITER + + LH++ +++AIDDFGT Sbjct: 367 SAPSFHQDVYELLAQ-LPGNYFTLVFEITERGMVEEGNALAEFDWLHKQGIEIAIDDFGT 425 Query: 422 GNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQ 481 G+S+ +L+ D LKID+ F +IG D V + V D +I+L ++L ++ VAEGVET EQ Sbjct: 426 GHSALIYLQRFSMDYLKIDRGFVNSIGRDTVTAPVLDAVISLAKKLKMQTVAEGVETAEQ 485 Query: 482 AKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQ 515 +L+ V+ +QGY Y++P+ + +F + Sbjct: 486 VSFLQEQDVNFMQGYYYSKPLSIDNFVAFCNAHT 519 >UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI Length = 528 Score = 463 bits (1191), Expect = e-129, Method: Composition-based stats. Identities = 149/515 (28%), Positives = 237/515 (46%), Gaps = 25/515 (4%) Query: 22 CALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSV 81 L L L + + + + LD ++ + +E P + + C Sbjct: 19 AFLFPLVIGLLLISWQTSHDLKNDIRDNLKAGNALLDSLVQHAEIANERAAPYLRMSCDN 78 Query: 82 AHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRA 141 A L A VRSI L ++ +YC S+ G P+ + + L L Sbjct: 79 AQPYLADLVAITPDVRSIHLSENNKIYCDSLGGKGIRPINESF----SADEELLLLQGNK 134 Query: 142 LIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNG 201 L LI V ++ L +L + + SL + +R G Sbjct: 135 LSPNHSALIFLR---DYDEGTVFSGVSSYYLRNIL--SLIKSYGNTSLHIGERWF-NERG 188 Query: 202 LVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQ--LPLAVLLSLLVGYIA 259 +V +P + +S ++P++++ + + L L +++S VG A Sbjct: 189 VVTHRSKPT---TIEQNSLKYPYSLSTSLTMEDYWDYFIDAKHTSLLLLLVMSFGVGGYA 245 Query: 260 WLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVF 319 + + EI + EFE + QP+++ + E+L+RW +P G I PD+F Sbjct: 246 FWRQGQINALDPEIRRAIRAQEFEPYIQPIMDIH-GRMASAEVLMRWQHPSAGLIRPDLF 304 Query: 320 IPIAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYW 377 IP+AEE LIVP+T VMA+ Q + S FH+ N++ H L+KD + Sbjct: 305 IPLAEESGLIVPMTSQVMAKVRDQLGPYQSKIPSDFHISFNISAKHCVNSDLVKDCQHFL 364 Query: 378 FSAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + + L LE+TER+ + D + + +L++ V+LAIDDFGTG+SS ++L+T + D Sbjct: 365 SAFNHPSLLSLELTERELIEDTEEARKLFAKLNQIGVRLAIDDFGTGHSSLNYLQTFQFD 424 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 VLKID+SF IGS+AV S + D ++ L QRLN++ VAEG+ET+EQ Y GV +QG Sbjct: 425 VLKIDQSFVRMIGSNAVASHIVDTLLNLAQRLNMQTVAEGIETEEQVTYFAARGVDYMQG 484 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMP 530 Y YA PMP+ DF L +G P P Sbjct: 485 YFYASPMPMDDFLTHLVIGTW-----DGSNVPTQP 514 >UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=C6DJC0_PECCP Length = 535 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 146/514 (28%), Positives = 245/514 (47%), Gaps = 15/514 (2%) Query: 8 IKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAG 67 + ++ N ++ + ++ L L F+ R + ++ + A A+ + + Sbjct: 5 LNKHKIN-LLQLLVAGILPLLLGLLFTFVESRLMVKRDLESTAQIAMNHAENISAQAWKM 63 Query: 68 SEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDI---- 123 + L G PC++ L++ + R+IG++ + +YCSS FG P+ + Sbjct: 64 VDRLQRFHGQPCNIIGDELQRLGSVFSYFRAIGVIHNTNVYCSSTFGSTLTPISRVIQQP 123 Query: 124 LAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQ 183 L E + + L + + + ++ P G G M++ L +++ + Sbjct: 124 LPETYSERWSLSIAGSDNVKERPALIFVQMPLTGD---GAYAMVDAQYLIDLMIAISKIR 180 Query: 184 ISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATAL--AWHYL 241 +L +D H + + ++ S RFP T+N+ P + + Sbjct: 181 GYQLTLKMDNGHPIQTGPAITPRIGLFSTSALEIRSSRFPITLNITAPASQEIANWKQAF 240 Query: 242 PTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 T LPLA++LSLL W ++ F EI G+A EF ++ QP+ +A SQ C GVE Sbjct: 241 FTFLPLAIILSLLFTTAIWYWQKRKLLFRDEIRKGIANGEFSVYYQPIYDAESQTCTGVE 300 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAP 361 LLRW WI PD+FI AE +I+P+TR++ + + FH+G+NVA Sbjct: 301 TLLRWRRSNGKWIRPDIFISAAEAESMIIPITRHLFDLVASDIASWQVKPGFHLGLNVAA 360 Query: 362 SHFRRGVLIKDLNQYWFSAHPIQQLI--LEITERDALLDVDYRI--ARELHRKNVKLAID 417 H + D++++ L LE+TER+ + + I +L + ID Sbjct: 361 EHLHHPSFVSDVHRF-AEKVASHSLSISLELTERNLISNGPEIIQRLHQLREDGFMITID 419 Query: 418 DFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVE 477 DFGTG+ S S+L+ D LKID+ F +AI S + + D II L R+N++ VAEGVE Sbjct: 420 DFGTGHCSLSYLQNFPLDCLKIDQGFVSAISSPDEEAPILDAIINLSHRINLQSVAEGVE 479 Query: 478 TQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 T++Q YL++HGV +QG+LYA+PM F WL Sbjct: 480 TKQQLMYLQQHGVKYIQGFLYAKPMDNESFLVWL 513 >UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomonas RepID=A5W2V7_PSEP1 Length = 528 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 152/526 (28%), Positives = 238/526 (45%), Gaps = 20/526 (3%) Query: 15 RMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPL 74 R ++ + L+ + L+V Q A+E ++ +L L + LLPL Sbjct: 14 RTLLPWVVGLLPVMCGLAVMNWQVEREMQASSHATTRQALEHVEHILDNLSRAANSLLPL 73 Query: 75 IGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLL 134 C A L LR Q + VRS L + LYC+S+FG + PV L Sbjct: 74 TDSSCEQAQLMLRAQVTRNAFVRSTNLFRHNNLYCTSLFGEFDEPVNPG----DYVDGKL 129 Query: 135 RLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKR 194 L ++ G P+L+ A + G + ++ D L L + + V Sbjct: 130 WLMDGNSVTPGHPLLVYR---ASDGDHGAITTVDGDHLLTALRLIGPDE--ELQIRVGDA 184 Query: 195 HLLYGNGLVDSLPQPEDNENYQVSSQRFPFTIN--VNGPGATALAWHYLPTQLPLAVLLS 252 + + + + N + S R+PF++ + L + P L L ++L Sbjct: 185 WMGKDGVVHKGVSPAAPSANVLIGSTRYPFSVQGGYSADKQGQLLRSHYPGLLSLLLVLG 244 Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 L S E++ L EF + QP++ + G E+L+RW++PR+G Sbjct: 245 ALAALACRWQIRRATSPRAELDRALQADEFLPYFQPVVRKGDYRWAGAEVLMRWHHPREG 304 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLI 370 + PD+FIP AE IV +TR ++ T + + + FH+G+N+ H R L+ Sbjct: 305 LVRPDLFIPYAEHSGQIVAMTRALLTHTAQSLAPYAGLLEDGFHIGVNITADHCRDLSLL 364 Query: 371 KDLNQYWFSAHPIQQ--LILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSF 426 D + P + L LE+TER + + +LH V +A+DDFGTG SS Sbjct: 365 DDCRTFLQ-HFPPGRVVLTLELTERKLIEPTPVTLELFEKLHAMGVMIALDDFGTGQSSL 423 Query: 427 SWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 ++L + D LKID+SF A IG+DA++ + + II L +L++ +VAEGVET Q YL Sbjct: 424 NYLRQFKVDYLKIDQSFVAMIGADALSVHILESIIELSGKLDLGIVAEGVETDLQRDYLA 483 Query: 487 RHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR 532 +HGV QGYL+A+PMP F LA P A P +R Sbjct: 484 KHGVDFQQGYLFARPMPAAQFLAALA--TRPGATQLPQDAPPEIMR 527 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 91/305 (29%), Positives = 152/305 (49%), Gaps = 13/305 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLG 276 ++ ++ L +A+ + R+ + Sbjct: 483 SMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRAKTRIELESYLRKA 542 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 + Q +F L+ QP + +S + +G E LLRW +P+ G ISP+ FIP+AEE +I+ + +V Sbjct: 543 VNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWV 602 Query: 337 MAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQQLILEITER 393 + E Q + + V +N++P FR ++ + + + + L LEITE Sbjct: 603 LQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITES 662 Query: 394 DALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + D+D I ++L K + LAIDDFGTG SS S+L+ LKID+SF I +D Sbjct: 663 LLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDD 722 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 ++++T +IAL +N+++VAEG+ETQEQ +L+ G + QGYLY+ P+ F + Sbjct: 723 NDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVAKEPFDHFF 782 Query: 512 AGSQP 516 P Sbjct: 783 TDGSP 787 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 140/259 (54%), Gaps = 6/259 (2%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 T RM + L + ++ QPL+++ + Q +G+E LLRW++P G ISP Sbjct: 612 MNRKTLERMMLENNLRNALQHDQLIIYYQPLVDS-TNQIVGMEALLRWHHPELGLISPSQ 670 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FIP+AEE LIVP+ ++V+ +Q + +F+V +N++ FR L++ + Q Sbjct: 671 FIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQI 730 Query: 377 WF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + P L LE+TE + + I + L K + +IDDFGTG SS S+L+ Sbjct: 731 LEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFP 790 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D LKID+SF ++ + + IIA+ + L ++ VAEGVE +EQ +L HG H++ Sbjct: 791 IDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMM 850 Query: 494 QGYLYAQPMPLRDFPKWLA 512 QGY + +PMP F L Sbjct: 851 QGYYFGRPMPAEKFEDMLQ 869 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 137/258 (53%), Gaps = 5/258 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R++ + + L + EF + QP ++ S + G+E L+RW +P G+ISP FIP+ Sbjct: 699 VLARLTMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPL 758 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LIV + +V+ Q + V +N++P FR+ L +++ + Sbjct: 759 AEETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEET 818 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + + LE+ E + DVD + L V+L +DDFGTG SS S+L+ D++ Sbjct: 819 GLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMM 878 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I D ++ + +I+L LN+ +VAEG+ET+ Q YLR +QG+ Sbjct: 879 KIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFY 938 Query: 498 YAQPMPLRDFPKWLAGSQ 515 +++P+P +F + L + Sbjct: 939 FSRPVPAAEFEQMLRDQR 956 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 134/268 (50%), Gaps = 5/268 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + R++ E+ + + EF L QP +NA S +G+E L+RW +P +G Sbjct: 260 FFKASTQSSAINRLNMESEMRKAIERGEFVLHYQPQINATSGHVVGMEALIRWQHPERGM 319 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 I P FI +AEE +IVP+ +VM E RQ + + + V +N++ F L+ Sbjct: 320 IPPYHFISVAEETGMIVPIGEWVMYEACRQNKAWHDAGLAELKVAVNLSARQFSDRKLLD 379 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + S L LEITE + D++ I E+ + LAIDDFGTG SS ++ Sbjct: 380 KVRHALKQSGLNPAFLELEITESVIMKDIEATIALLEEIASMGLSLAIDDFGTGYSSLNY 439 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ D LKIDKSF + S + + + II L L + ++ EGVE EQ +L+ Sbjct: 440 LKRFPIDKLKIDKSFIDDVISSEDDGKIVEAIIGLSHNLKLNVICEGVEDAEQFAWLQER 499 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQP 516 + +QGY +++P+P +F ++ Sbjct: 500 QCNEIQGYYFSKPLPADEFEAFVRSRNA 527 >UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VEI6_VIBAL Length = 511 Score = 449 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 146/507 (28%), Positives = 258/507 (50%), Gaps = 19/507 (3%) Query: 13 RNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV-- 70 R R + T+ +++ L + + + + Q++ + A+ V ++D + + +E Sbjct: 6 RVRPLFVTLASIILSLIVLQLSYKTFLSSLQEQALDRADSIVHKIDSIFFYAEEANERTL 65 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 L L G C A LRK AA + VR+ + DG + C+S++G + D L Sbjct: 66 SLALRGNNCDEASYELRKIAASIPYVRTTNISVDGYINCTSLWGDKIFEDDDERYVLD-- 123 Query: 131 QPLLRLTIDRALIKGSPVLIQWTPAAGSSN-AGVMEMINIDLLTAMLLEPQLPQISSASL 189 L L + + P+++ T + +G+ + L + L+ L A Sbjct: 124 --KLLLMPGSQVAQNHPLIVLRTNKDNMAALSGIDALHLRQTLFSSTLDSHL-----AYF 176 Query: 190 TVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGAT--ALAWHYLPTQLPL 247 ++ K L L++ P + S FP++I+V ++ WH + L Sbjct: 177 SLGKIWLDQNGALLNRDPTKQLVGVESSKSDFFPYSISVGFSYSSLQEAFWHEKKFYILL 236 Query: 248 AVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWN 307 +L+ L W T S E+ + + EF + Q ++NA++++ GVEIL+RW Sbjct: 237 ILLIQLSFLVYYWWHTTRPQSLDEELKRAIKKKEFVPYAQAVVNAKTREIEGVEILMRWL 296 Query: 308 NPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF--PMSSQFHVGINVAPSHFR 365 +P QG + PD+FIP AEE LIVP+T ++ ET +Q + ++ FHVG+N++P H R Sbjct: 297 HPIQGVVRPDLFIPQAEESGLIVPMTELLLKETAKQLCDYSSHLTKPFHVGVNISPQHCR 356 Query: 366 RGVLIKDLNQYWFSAHPIQ-QLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTG 422 L + ++ + + L+LE+TER+ L + + +L + K+AIDDFGTG Sbjct: 357 GMGLANECKEFIQTVNQENIMLVLELTEREVLDFSESTEVLFSDLKKLGCKIAIDDFGTG 416 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 +SS + L+ + + +KID+ F +GS+ + + + I L RL++E+VAEGVET+EQ Sbjct: 417 HSSLANLQKFQVNYIKIDQMFVQGVGSNPTSRHLVESTIELANRLSLEIVAEGVETEEQQ 476 Query: 483 KYLRRHGVHILQGYLYAQPMPLRDFPK 509 +YL + V LQG+L+++P+PL +F + Sbjct: 477 EYLANYHVKYLQGFLFSKPIPLEEFLQ 503 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 449 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 94/336 (27%), Positives = 160/336 (47%), Gaps = 16/336 (4%) Query: 193 KRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLS 252 + N L+ +L +P D + +S+ +I V+ L +A+ + Sbjct: 422 DDVIFVANKLLATLSRPLDISGHSISAT---VSIGVSIFPEDGADTDELLKNADIAMYKA 478 Query: 253 --------LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 + ++ + Q++ L+ QP ++ ++ GVE L+ Sbjct: 479 KEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALV 538 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPS 362 RW +P +G +SP FIP+AEE LIVP+ +V+ E +Q+ ++ + + V +N++P Sbjct: 539 RWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPR 598 Query: 363 HFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDF 419 FR+ + + + L LEITE A+ I +L++ LAIDDF Sbjct: 599 QFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDF 658 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GTG SS ++L+ LKID+SF I DA ++ + II L + + +VAEGVET+ Sbjct: 659 GTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETE 718 Query: 480 EQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQ 515 QA++LR G +QG+LYA+PM + + Sbjct: 719 SQAEWLRAKGCDQVQGFLYAKPMTAKQLESHFHNGR 754 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 449 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 134/265 (50%), Gaps = 5/265 (1%) Query: 255 VGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 + + + L ++EF +F QP ++ +S + +G+E L+RW +P G + Sbjct: 643 FSREMNVQALEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLL 702 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKD 372 P FIP+AEE LI+P+ + + + + + V +N+ FR+ I+ Sbjct: 703 PPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIEL 762 Query: 373 LNQYWF-SAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWL 429 + + QL LE+TE + + + +L V LAIDDFGTG SS S+L Sbjct: 763 IEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYL 822 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + + +KID+SF + ++ ++ + IIA+ LN+++ AEGVE Q ++L Sbjct: 823 KNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRN 882 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGS 514 + +QGYL + P+P +F ++L G Sbjct: 883 CNEIQGYLLSSPLPEAEFTRFLRGG 907 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 85/270 (31%), Positives = 138/270 (51%), Gaps = 5/270 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 L + R+ + + E + QP ++ + + IG E LLRWN+ G Sbjct: 440 LFVNSMNVVAKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSAELGM 499 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP FIPIAEE LI P+ +V+ E RQ + + + +N++ F + L K Sbjct: 500 VSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQSLDK 559 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 +++ + P+ L LEITE + DV+ + +L + LAIDDFGTG SS S+ Sbjct: 560 LVSKVLLETGLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYSSLSY 619 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ D LKID+SF + ++ ++ VT II++ L + ++AEGVE Q ++LR+H Sbjct: 620 LKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEFLRQH 679 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPP 518 +QGY +++P+ D L + P Sbjct: 680 HCEEMQGYYFSRPLIASDMEALLRSHKGSP 709 >UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 Tax=Edwardsiella RepID=C5BG29_EDWI9 Length = 514 Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 148/514 (28%), Positives = 246/514 (47%), Gaps = 33/514 (6%) Query: 16 MIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLI 75 ++ +V L +T+++ + Q A+ ++D+ L Q + + Sbjct: 16 LLSAGAVGMVLLLATVTIS-WQASRGLAESAKQRLTLAIGQIDEALDNAQTAVDAVRRYA 74 Query: 76 GLPCSVA-HLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLL 134 G PC H L QA + VRS+ L Q +YCSS++G + V D L Sbjct: 75 GQPCDTTLHNMLAFQATTVPDVRSVSLAQASVIYCSSLYGAFHAEVGD----DHYTNKRL 130 Query: 135 RLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKR 194 L + +++ P G +A V+ I+ L +L P + L + Sbjct: 131 TLMSGNRITPHRSLVVFREPGPG--DASVLVGIDGYYLRNILRSLSTP--TPLYLRIGAG 186 Query: 195 HLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQ----LPLAVL 250 + +VD+LP P D + S R+P ++ P + W Y+ L L ++ Sbjct: 187 WMDPQGQVVDALP-PVDGRRFVRHSSRYPISVTTAVPIDS--HWTYMLDYSRGSLVLFLV 243 Query: 251 LSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPR 310 L+ + G + S + L Q +F + QP+++ + G EIL+RW +P+ Sbjct: 244 LAFVFGVGTYRLVGQVNSPVFYLREALRQRQFIPYIQPVVDGADESLSGCEILMRWQHPQ 303 Query: 311 QGWISPDVFIPIAEEHHLIVPLTRYVMAET-------IRQRHVFPMSSQFHVGINVAPSH 363 G I P+ FIP+AE+ LIV +TR +M + R + FH G N++ SH Sbjct: 304 MGLIPPNNFIPLAEDSGLIVAMTRDIMRQVSDYFAPRCRSL-----PTHFHFGFNISASH 358 Query: 364 FRRGVLIKDLNQYWFSA-HPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFG 420 F L+++ ++ + +L+LE+TER + D + I +L V LA+DDFG Sbjct: 359 FNDLSLVEECRRFIDAFEANPIRLVLELTERQRVPDGELTEQIFHKLRGLGVLLALDDFG 418 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 TG+SS ++L+ D++KID+SF IGSD ++ + D +IAL +RL++ +AEGVE+ E Sbjct: 419 TGHSSLAYLQRYHFDIIKIDRSFVRMIGSDMLSGHIVDTVIALAKRLDMITLAEGVESGE 478 Query: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPK-WLAG 513 Q ++LR + + LQGYL+ P PL DF + WL Sbjct: 479 QLQHLRGYRLDYLQGYLFGCPQPLPDFTREWLKS 512 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 87/275 (31%), Positives = 137/275 (49%), Gaps = 5/275 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + R+ + L + EF L QP + RS G+E LLRW +P G Sbjct: 687 FFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGV 746 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 + P+ FIPIAEE LIVPL +V+AE RQ + + +NV+ FR+ L Sbjct: 747 VPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGL 806 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSW 428 + + + L LE+TE + + + I R+L + + L+IDDFGTG SS S Sbjct: 807 RIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSH 866 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ D LKID+SF + D ++T+ + IIAL + + +VAEG+E EQ +++ + Sbjct: 867 LKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQR 926 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNG 523 +QGY ++P+ +F +L + +G Sbjct: 927 HCDTMQGYYLSRPVTAEEFGTFLKRLGESDGKAHG 961 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 87/269 (32%), Positives = 137/269 (50%), Gaps = 5/269 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 L R+S ++ L + EF L QP +N Q +E L+RW +P G Sbjct: 357 LFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGL 416 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIK 371 + P FIP+AEE LIVPL +V+ +Q + + V +N++P R+G L + Sbjct: 417 VPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSE 476 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + + L++E+TE + D + I R L R V+++IDDFGTG SS + Sbjct: 477 TVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHY 536 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ LKID+SF I S+ + + +I++ + LN+ +VAEGVET EQ + LR Sbjct: 537 LKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRAL 596 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 +QG+L+++P P F L + P Sbjct: 597 NCRYMQGFLFSEPAPAEQFTPVLGHAATP 625 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 90/335 (26%), Positives = 157/335 (46%), Gaps = 9/335 (2%) Query: 191 VDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVL 250 ++ L + I NG + T L A Sbjct: 519 INDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKE 578 Query: 251 LS----LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 L L R+ + + + EF LF QP ++ ++ + +G E LLRW Sbjct: 579 LGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRW 638 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHF 364 +P G + P FIP+AE+ LIV + +V+ RQ + + +N++ F Sbjct: 639 YHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQF 698 Query: 365 RRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGT 421 +R +++ +++ + + L LEITE A+ D+ + I +L +K +++++DDFGT Sbjct: 699 QRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGT 758 Query: 422 GNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQ 481 G SS ++L L D LKIDKSF I +++ + +I+L +L++ +VAEGVET+EQ Sbjct: 759 GYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQ 818 Query: 482 AKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQP 516 +L++ QGYL+++P+P + K L + Sbjct: 819 LLFLKKEKCDKAQGYLFSKPLPAEEIEKMLRDKKC 853 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 90/278 (32%), Positives = 145/278 (52%), Gaps = 15/278 (5%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 L+ + + + L ++E +L+ QP ++ + Q IG E LLRW++P G ISP Sbjct: 685 MQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAE 744 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FIPIAE I+ + +V+ IRQ + + +N++ FR+ L+ + Sbjct: 745 FIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDI 804 Query: 377 WFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 P + L LE+TE + D + I H + ++++IDDFGTG SS S+L+ + Sbjct: 805 LAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFK 864 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 LKID+SF I +D + + II + L ++ +AEGVET EQ +LR HG H + Sbjct: 865 VYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEV 924 Query: 494 QGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPL 531 QGY +++P+P +F ++ RHN +T PL Sbjct: 925 QGYYFSKPLPSVEFEQF---------RHNHDLT-SPPL 952 >UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6AJG8_VIBHA Length = 501 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 145/515 (28%), Positives = 251/515 (48%), Gaps = 31/515 (6%) Query: 12 RRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVL 71 R R+++ I ++ ++ + ++ + V +DK++ S+ Sbjct: 6 RTKRILLAFIVLILLISIGSVGVYQLSKSNLHREVRSSLEVGKSLMDKLVKNADVASQRA 65 Query: 72 LPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQ 131 LP + C A LR + V+ I L +D ++C S+ G R+ I+ Sbjct: 66 LPYTKMECEQALPYLRDLVVTIPDVQMIALAKDNHVFCGSLVGKRDY----IVPNYHFSG 121 Query: 132 PLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTV 191 L L +P LI + N GV ++ L +L L V Sbjct: 122 DKLFLVSSLPDKPNTPALIF---KNETGNTGVGVSVSGYYLKNILSLTLKD--LDTYLQV 176 Query: 192 DKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVN---GPGATALAWHYLPTQLPLA 248 ++ + + D QV S+ +P+ + V+ L H + + + Sbjct: 177 GEKWINKAGQISDQPLPVT----IQVESKDYPYRLQVSLFHDDYMNYLLSHKR-STIFII 231 Query: 249 VLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNN 308 +L +L + ++ ++AT S ++ LA +EF + QP ++ ++ + +G E+L+RW + Sbjct: 232 ILFALSMSWLIFVATGQTPSMEDKLRQALANNEFVPYVQPYVD-KTNKFVGFEVLVRWLS 290 Query: 309 PRQGWISPDVFIPIAEEHHLIVPLTRYVMAE------TIRQRHVFPMSSQFHVGINVAPS 362 P++G I PD+FIP+AE+ LI+P+T+ +M + Q + F V N++ Sbjct: 291 PKEGLIRPDLFIPLAEDSGLIIPMTKSLMLQVSNELAACSQ----SLPPDFSVAFNISAK 346 Query: 363 HFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDYR--IARELHRKNVKLAIDDF 419 H L++D ++ S + QL LE+TER+ + D D + L +V LAIDDF Sbjct: 347 HCVNSELLEDSLEFLSSFPEKKVQLCLELTERELVRDTDEARALFHSLSEHDVSLAIDDF 406 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GTG+SS S+L R D+LKID+SF IG+D+V++ + + ++ L RL ++ +AEGVET Sbjct: 407 GTGHSSLSYLRQFRFDILKIDQSFVQMIGNDSVSAHIVENLLDLASRLGMKTIAEGVETA 466 Query: 480 EQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 EQA+YLR H + LQGY +A+PMPL+DF + L + Sbjct: 467 EQAEYLRSHNIDCLQGYYFAKPMPLKDFIQQLEQN 501 >UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=39 Tax=Enterobacteriaceae RepID=B4T8H8_SALHS Length = 516 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 139/509 (27%), Positives = 229/509 (44%), Gaps = 13/509 (2%) Query: 20 TICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPC 79 + V L + V ++ ++ + AN + + + L C Sbjct: 1 MLFIAVPLIVMILVGLLAGIFQLKRDIAVSANTLLRFSADISAASWQVARKAARLAESSC 60 Query: 80 SVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILA-ELPAPQPLLRLTI 138 + L + A VR IG +++G + CS + G + LPA P L Sbjct: 61 TDTLKELSRTRAFTPYVRDIGFLENGDITCSFVTGTERYHFSRLAGLSLPASYPERWLRS 120 Query: 139 DRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLY 198 ++ +G L+ ++N +++ + ++ + S+ SLT + Sbjct: 121 IGSMAEGPDRLVVVYVKKVAANKAAFVIVDSQYVQELMEILAAERASAFSLTFGAGEAIT 180 Query: 199 GNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGAT--ALAWHYLPTQLPLAVLLSLLVG 256 + + +S + V P +T A L +PL++ LS+ + Sbjct: 181 SAATLRGKAFLTQ----RFTSTDHTIQLMVRTPFSTLSAYWLQNLFIFIPLSLCLSVGMM 236 Query: 257 YIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISP 316 R+S +REI G+ +EF + QP+ N C GVE L+RW P +I+P Sbjct: 237 LFYRRWYLKRLSLAREIARGITHNEFTVHYQPVFNVEDGSCGGVEALMRWPQPDGRFITP 296 Query: 317 DVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQY 376 D+FI AE +I+PL+R++ + +S F++ +N++P+H I+D+ + Sbjct: 297 DIFITAAENEGMIIPLSRHLFELIAHDVINWTVSDDFYISVNISPAHLMDDGFIQDI-EA 355 Query: 377 WFSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 + L+LE+TER +++ L K V +AIDDFGTG S S+L+ L Sbjct: 356 LRTRLGTITLMLELTERSLIVEPSQVAEKLSTLREKGVLIAIDDFGTGYCSLSYLQQLPV 415 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID++F I + + + V D II L QRL + +VAEGV TQ Q +Y+ HGV +Q Sbjct: 416 DSLKIDRTFIDTIDTSSDDVPVLDTIITLSQRLGLNVVAEGVSTQHQLRYILSHGVGFVQ 475 Query: 495 GYLYAQPMPLRDFPKWLAGSQPPPARHNG 523 G+LYA+PM DF WL S R NG Sbjct: 476 GFLYARPMGANDFMSWLGKS---AQRQNG 501 >UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya RepID=C6CFE9_DICZE Length = 501 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 136/509 (26%), Positives = 250/509 (49%), Gaps = 22/509 (4%) Query: 17 IVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIG 76 ++ + + A L + ++Q A AV+ ++++L + E PL+ Sbjct: 4 LIALLTFVAMFAMGLWAIYYQDYRADRQGAYANAERAVKNIEEILDEAKNAVEDSKPLLA 63 Query: 77 LPCSVAHL-PLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLR 135 L C+ + L AA +R++ L++ +YCSS++G N P + L Sbjct: 64 LSCTPEVIRQLNMTAAVASHLRTVSLIKRDVVYCSSLYGVDNRPAALERFHM----RELA 119 Query: 136 LTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRH 195 L ++ LI + + GV I+ LT++L + + L V Sbjct: 120 LLAGNSVTPDR-TLIMYLGNTAYGSVGV--AIHGQHLTSVLDLLSKRR--NLYLLVGNTW 174 Query: 196 LLYGNGLVDSLPQPEDNENYQV-SSQRFPFTI--NVNGPGATALAWHYLPTQLPLAVLLS 252 + N + S P D N+ + S + F+I ++N + A W+ + L++ Sbjct: 175 ISRENQV--STFNPTDLPNFVIIPSGHYHFSILYSLNEKYSLADFWYKEKMTFLIVFLIA 232 Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 L G++A+ + S I + E + QP+++ S++ GVE+L RW++P+ G Sbjct: 233 LGSGFLAYKYSTRINSPYDGIRRAIENQEVLPYYQPVISTVSREIYGVEVLARWHHPKSG 292 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQR--HVFPMSSQFHVGINVAPSHFRRGVLI 370 +ISPD+FIP+ E+ LI+P+TR +M+ +R H+ + H+ IN++ H + I Sbjct: 293 FISPDIFIPLCEQSGLIIPMTRSLMSSVVRDLTPHLNTLPDNLHIAINISAQHCQSDDFI 352 Query: 371 KDLNQYWFSAHPIQ-QLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 D + + L++EITER+ + I ++L V +A+DDFGTG S+F Sbjct: 353 TDCQNFIAAFGDKNVHLMIEITEREKVDITPETIGFFKKLSDAGVLIALDDFGTGYSNFD 412 Query: 428 WLETLRPDVLKIDKSFTAAIG-SDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 +L L +V+KID+SF + I +D +ST+ + +I L Q++ + +AEGVET+ Q ++L Sbjct: 413 YLRKLHVNVIKIDQSFVSMIDENDPQSSTLVNCVIDLAQQMKLMTIAEGVETEFQTEFLS 472 Query: 487 RHGVHILQGYLYAQPMPLRDFPK-WLAGS 514 R ++ +QGY +++P+P + + WL Sbjct: 473 RKHINFMQGYFFSRPLPFDELAQTWLNKR 501 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 95/303 (31%), Positives = 147/303 (48%), Gaps = 14/303 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLG 276 +I ++ L A+ L+ A ++ RE+ Sbjct: 507 SIGISMYPDDGDDIEALLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKA 566 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L + +F L QP ++ ++ Q IG+E L+RW++P G I P FIPIAEE LIVPL +V Sbjct: 567 LDEKQFTLHYQPKIHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWV 626 Query: 337 MAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITER 393 M +Q + + Q V +N++ F + LI+ + + Q L LEITE Sbjct: 627 MRTACQQTKAWQEAGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITES 686 Query: 394 DALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAV 452 AL D RI L V ++IDDFGTG SS S+L D LKID+SF + + Sbjct: 687 MALNVDYTIRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQ 744 Query: 453 NSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512 N + II + + I ++AEGVET E +L+ + +QGY Y++P+P ++ +L Sbjct: 745 NQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQ 804 Query: 513 GSQ 515 ++ Sbjct: 805 VNR 807 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 443 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 89/267 (33%), Positives = 138/267 (51%), Gaps = 7/267 (2%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 A R + ++ + H+F+L Q ++ S+ G E L+RW +P G +SPD FIP+A Sbjct: 635 AKRTALEGDLRKAIENHQFQLHYQIQVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLA 693 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFP---MSSQFHVGINVAPSHFRRGVLIKDLNQYWFSA 380 EE LI+P+ +V+ + + +S F + +NV+ FR+ + + Sbjct: 694 EESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQY 753 Query: 381 -HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE L +++ I L VK ++DDFGTG SS +L+ L D L Sbjct: 754 EINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQL 813 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I DA + + IIA+ L+++++AEGVET+EQ K+L G QGYL Sbjct: 814 KIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYL 873 Query: 498 YAQPMPLRDFPKWLAGSQPPPARHNGH 524 + +P+P+ F L S PA Sbjct: 874 FGKPVPIEQFETSLRKSLFQPADSCHE 900 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 133/262 (50%), Gaps = 5/262 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 R+ E+ + +E L QP ++ + +G+E L+RWN+P G + P FI Sbjct: 646 QALERLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFIS 705 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-F 378 +AEE LI+P+ +V+ RQ + Q + +N++ F + L++ + Sbjct: 706 LAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQE 765 Query: 379 SAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + + L +E+TE + D++ I R+L V+L++DDFGTG+SS ++L+ D Sbjct: 766 TGLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDT 825 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF I + ++++ II+L L + ++AEGVET Q LR G + +QGY Sbjct: 826 LKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGY 885 Query: 497 LYAQPMPLRDFPKWLAGSQPPP 518 + +P+P L Sbjct: 886 YFCKPLPSDQIETLLLNESSAA 907 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 142/267 (53%), Gaps = 5/267 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + ++ + + ++ ++ QP + S++ IG E L+RW +P G Sbjct: 620 FYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGM 679 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 ISP FIP+AEE LIV + +V+ ++ Q + ++ + +N++ FR+ L+ Sbjct: 680 ISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLVP 739 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSW 428 + + + + L LEITE + DVD + R ELH ++L+IDDFGTG SS ++ Sbjct: 740 MVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLAY 799 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ LKID+SF + D ++ + +I L + +N+ ++AEG+E Q+Q ++L Sbjct: 800 LKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLDR 859 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQ 515 G QGYL+++P+P +F + L Q Sbjct: 860 GCGYGQGYLFSRPIPAHEFEQLLVRQQ 886 >UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA Length = 506 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 140/498 (28%), Positives = 239/498 (47%), Gaps = 19/498 (3%) Query: 19 CTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLP 78 + + + L+ + S + A+ V+E+D++L + + L L+ P Sbjct: 12 LVLLSFLPSLFALAFLYFSFGQSLDELSQLKASSVVQEVDEILEYGEEANNQSLMLLEKP 71 Query: 79 --CSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRL 136 C + LR A + VRS L +D +YC+SI+G + LRL Sbjct: 72 DSCEAHSVALRHLVATVPYVRSANLAKDNVIYCTSIWGDSHYQ----YDLADYSSGRLRL 127 Query: 137 TIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHL 196 + P+++ + + I+ L +L + L V ++ L Sbjct: 128 MHGSKVDAKHPLIVVRSESGED---TAFSGIDSLYLRQLLEPHDK---LHSYLAVGEQWL 181 Query: 197 LYGNGLVDSLPQPEDNENYQVSSQRFPFTIN--VNGPGATALAWHYLPTQLPLAVLLSLL 254 + ++ P ++VSS FP+++ + P + W + +++ L Sbjct: 182 DSKDLVLKVNPADRLVAWHKVSSANFPYSVYSGFDYPSMISAFWERDNQYIIAILIIQTL 241 Query: 255 VGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 + + EI + EF + QP+LN+ +++ G+EILLRW +P QG + Sbjct: 242 FALYLLWLSRRPSNLYLEIERAMENKEFVPYAQPILNSANREIQGIEILLRWQHPVQGTV 301 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKD 372 PD+FIP AE LI+P+T +M T ++ ++ FHVG+N++P H +G L+ Sbjct: 302 RPDLFIPKAERSGLILPITHQLMINTAKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVSA 361 Query: 373 LNQYWFSAHPIQ-QLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSSFSWL 429 ++ L+LE+TER+AL D+ I ++ K+AIDDFGTG+SS L Sbjct: 362 CQEFIDIVDSKDVTLVLELTEREALNYCDLTDEIFTQIKSMGCKIAIDDFGTGHSSLVNL 421 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + D LKID++F IG D + + +I L L++++VAEGVET+ QA+YL+ G Sbjct: 422 RKVDLDYLKIDQTFVRDIGVDTITGHLLQNMITLSHDLSLDVVAEGVETEFQAEYLKERG 481 Query: 490 VHILQGYLYAQPMPLRDF 507 V LQG+L+A+PMPL++F Sbjct: 482 VSYLQGFLFAKPMPLKEF 499 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 94/280 (33%), Positives = 138/280 (49%), Gaps = 5/280 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + R+S + LA++EF L QP +N + + +GVE L+RW P++G Sbjct: 594 FFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGL 653 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 I PD FIP+AEE LI+P+ +V+ T Q + + Q + +N++ F L Sbjct: 654 ILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPD 713 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + L LEITE +L+ + I EL + +AIDDFGTG SS S Sbjct: 714 TIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSL 773 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L D+LKIDKSF + I + + T+ II LG + + LVAEGVE QEQ +L Sbjct: 774 LKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEER 833 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPI 528 +QGY +++P+P L P A T Sbjct: 834 NCQEVQGYYFSKPLPAETLQPLLKNGTYPAAAGRQQPTDA 873 >UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJN3_CITRO Length = 513 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 129/506 (25%), Positives = 223/506 (44%), Gaps = 6/506 (1%) Query: 18 VCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGL 77 + + L +S+ F+ + +Q + + + ++ L+ Sbjct: 7 FLMLSIFIPLGIMISLAFVVSTLILKQDISISGKTLLRFSSDMSAVSWRATKKAALLVNR 66 Query: 78 PCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILA-ELPAPQPLLRL 136 C L + A +R IG++++G + CS + G + P + LPA P + Sbjct: 67 RCPDMLDALTRTRAFTPYIRDIGVLENGEMTCSFVSGEKRQPFSQLSGLTLPALLPERMI 126 Query: 137 TIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHL 196 + + + +G + S+ V +++ + ++ + S LT+ + Sbjct: 127 LVAKRMAEGPDRPVILYAEKISAQKAVFTIVDSQYIQELMDILAAERSSVFRLTMGNGNA 186 Query: 197 LYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVG 256 + VDS +P + + ++ + + +A L + L++ S L Sbjct: 187 IVSG--VDSGEKPFLTQRFTSANGDIHLRVETSFSTLSAWWLQNLLIFILLSLCFSFLFV 244 Query: 257 YIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISP 316 + +S REI G+A +EF++ QP+ N C G E LLRW P +ISP Sbjct: 245 LLYRRWRQKSLSLGREIERGIANNEFQVHYQPVFNVGRSACGGAEALLRWPQPHGRFISP 304 Query: 317 DVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQY 376 D+FI AE IV LTR++ + + + F++ +N+AP H + D+ Sbjct: 305 DIFITAAENEGKIVALTRHLFDLIAKDVSRWKVPEGFYISVNIAPEHLISDDFVSDVM-A 363 Query: 377 WFSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 LILE+TER + + L + V++AIDDFGTG S S+L+ L Sbjct: 364 LKERLAKLGLILELTERSLIAEPAKVSAKLELLRSQQVEIAIDDFGTGYCSLSYLQQLPA 423 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID++F I + + + D II L Q L +++VAEGV ++ Q +Y+ GV+ +Q Sbjct: 424 DYLKIDRTFINTIDTSGSDVPILDTIITLSQNLGLQVVAEGVSSKHQLRYILDQGVNYIQ 483 Query: 495 GYLYAQPMPLRDFPKWLAGSQPPPAR 520 GYLYA+PM DF WL R Sbjct: 484 GYLYARPMSSADFMVWLDKDVQQQNR 509 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 5/265 (1%) Query: 258 IAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPD 317 +A R+ + L+ E L QPL++AR+ +GVE L+RW P + + P Sbjct: 525 ALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPG 584 Query: 318 VFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQ 375 FIPIAEE LIVPL +V+ +Q + + + +N++ F+ L+ + + Sbjct: 585 KFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQR 644 Query: 376 YWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETL 432 + P L LE+TE + V+ I +L V LAIDDFGTG SS +L+ Sbjct: 645 ILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRF 704 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D LKID+ F + D + + IIA+ + L + ++AEG+E++EQ +LR+ Sbjct: 705 PIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDY 764 Query: 493 LQGYLYAQPMPLRDFPKWLAGSQPP 517 QGYL+ +P+P + WL P Sbjct: 765 YQGYLFHRPVPAIELEAWLREHSVP 789 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats. Identities = 93/305 (30%), Positives = 154/305 (50%), Gaps = 13/305 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAW--------LATAYRMSFSREINLG 276 +I ++ A + L +A+ L+ G + +A R+ ++ Sbjct: 816 SIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSIAANERLVLETQLRQA 875 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L+ EF L QPL++AR Q +GVE L+RW P + +SP FIPIAEE LIVPL +V Sbjct: 876 LSAGEFVLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWV 935 Query: 337 MAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWFSA-HPIQQLILEITER 393 + Q + + + +N++ F+ L++ + Q P L LE+TE Sbjct: 936 LRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTES 995 Query: 394 DALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + + I + L V+L+IDDFGTG SS ++L+ D LKID+SF + D Sbjct: 996 MFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDP 1055 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 + + IIA+ + L ++++AEGVE+++Q L +HG QGYL+ +P+P ++ W Sbjct: 1056 NDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQELEVWF 1115 Query: 512 AGSQP 516 ++ Sbjct: 1116 RENKR 1120 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 439 bits (1131), Expect = e-122, Method: Composition-based stats. Identities = 92/271 (33%), Positives = 138/271 (50%), Gaps = 5/271 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A RMS + + L EFEL+ QP + + + G+E L+RW N G + P FIP Sbjct: 378 RVASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIP 437 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-F 378 +AEE LIV + +V+ Q + + V +N++P FR L + Sbjct: 438 LAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVLRE 497 Query: 379 SAHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + + L LEI E + DV+ + EL VKL++DDFGTG SS S+L+ Sbjct: 498 TGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAK 557 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID SF I +D ++ + II++ LN+ +VAEGVET+ Q ++LR HG + +QGY Sbjct: 558 LKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGY 617 Query: 497 LYAQPMPLRDFPKWLAGSQPPPARHNGHITP 527 ++P+P +F L + R G P Sbjct: 618 YLSRPLPAAEFEGMLRENLRLRLREEGESLP 648 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 5/274 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R+ + L Q EF L+ QP ++ S IG E L+RW +P G Sbjct: 554 FFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGL 613 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 + P F+PIAEE LIVP+ +V+ E RQ + S V +N++ FR ++ Sbjct: 614 VYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLE 673 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSW 428 + + L LE+TE + D + + L ++LAIDDFGTG SS S+ Sbjct: 674 GVALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSY 733 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ + LKID+SF I D ++++ +I +G+ L +VAEGVET+EQ +LR Sbjct: 734 LKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTL 793 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHN 522 QG+L+ +P+P +F + L + A N Sbjct: 794 HCDEGQGFLFGRPLPADEFARLLLNDRGFSADLN 827 >UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3R8_DICDC Length = 500 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 138/509 (27%), Positives = 241/509 (47%), Gaps = 19/509 (3%) Query: 15 RMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPL 74 R ++ + L LA + + Q A AV +++ + Q + L Sbjct: 2 RRLIAILTFLAMLAIGCGAIYYHNYQSDIQDANVSAVKAVNDIETIFNDAQRVVNLGKTL 61 Query: 75 IGLPCSVAHLP-LRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPL 133 + +PC + L AA +R+I LV++ +YCSS+FG N P + Sbjct: 62 LTVPCDTVVIRKLNMLAAIENYLRTISLVRNDIVYCSSLFGVDNRPAALERFY----KGQ 117 Query: 134 LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDK 193 L L ++ P+++ + N V I+ L +L + L V Sbjct: 118 LALLPGNSVTPNKPLVMYM---ETTENGSVAAGIHGIHLFNILNSLSKQR--DLYLRVGA 172 Query: 194 RHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTI--NVNGPGATALAWHYLPTQLPLAVLL 251 L +G+V + +V S+ + F+I V+ W L + L+ Sbjct: 173 TWL-SRDGMVAPFDERTLPNYVEVPSRHYYFSILYTVDDNYTLVDFWDQEKMTLLIVFLI 231 Query: 252 SLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQ 311 +L G +A+ T+ S + + E F QP+++ +S++ G E+L RW +P+ Sbjct: 232 ALGSGMLAYKYTSRITSPVEALKRAIRNQEIVPFYQPVISTQSRELYGFEVLARWYHPKT 291 Query: 312 GWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVL 369 G+ISPDVFIP++E+ LI+PLTR +M I H+GIN++ H + Sbjct: 292 GFISPDVFIPLSEQSGLIIPLTRLLMERVINDLISCQDILPEDLHIGINISAKHCQYEGF 351 Query: 370 IKDLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSF 426 I D + + +L++EITER+ + + + L + +A+DDFGTG S+F Sbjct: 352 IDDCKYFIDALGTRKIRLMVEITEREKIEITPTTLRFFQNLKAAGILIALDDFGTGYSNF 411 Query: 427 SWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 +L L+ D++KID+SF + I ++ ++ + + +I L Q +N++ +AEGVET+ QA++L Sbjct: 412 DYLRQLQADLIKIDQSFISMIDENSQSTPLVNCVIDLAQNMNLKTIAEGVETEFQAEFLS 471 Query: 487 RHGVHILQGYLYAQPMPLRDFPK-WLAGS 514 + LQGYL+++P+P + K WL S Sbjct: 472 EKNIDYLQGYLFSRPLPFDECVKTWLQKS 500 >UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteobacteria RepID=A6V3S1_PSEA7 Length = 526 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 147/523 (28%), Positives = 240/523 (45%), Gaps = 14/523 (2%) Query: 8 IKTYRRNRMIVCTICALVTLASTL---SVRFISQRNLNQQRVVQFANHAVEELDKVLLPL 64 I RR R+ I L + F R + + +LD +L + Sbjct: 3 IGKQRRERLFHFGIVFAALAIVPLLMAPLVFQQARMRADGEAAVTSVAVLRQLDTLLGVV 62 Query: 65 QAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGY-RNVPVVDI 123 + +G PC+ L + RS+ LV+ G +YCSS+ G +++P+ Sbjct: 63 SGSLDRSQGALGKPCAEVLGRLTRMTMLSPYFRSLVLVERGNVYCSSLQGELKDLPLPVA 122 Query: 124 LAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQ 183 L + P R+T A + ++ +GV+ +I+ L + Q Sbjct: 123 FKALGSLAPGQRITPSNATPQVPERASVIMSRGDANGSGVLAIIDGQYLLDI----QQAA 178 Query: 184 ISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPT 243 V L +P +D +S RFP + V A A A+ Sbjct: 179 SYDGRFQVQMVLRESQRQLPGGMPATQDGGGAIAASARFPVEVRVAVAPALASAYRADAW 238 Query: 244 --QLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 P VL ++L GY+A L R+S ++ + EF + QP++ + +C GVE Sbjct: 239 RHYTPFIVLAAMLAGYLAHLFCRRRLSLVGDMYRAMRAREFHMVYQPIIRLDTGECRGVE 298 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAP 361 L+RW P + PD+F+P+AE++ +I LTR++ + + H+G+NV+ Sbjct: 299 ALVRWRRPDNSQVRPDIFVPLAEDNGMIGDLTRHIFGLVAADLAQLGLGAGDHLGVNVSG 358 Query: 362 SHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDAL--LDVDYRIARELHRKNVKLAIDD 418 SH + D+ + QL+LE+TER+AL R R+L V+ A+DD Sbjct: 359 SHLAGQGFVDDVRRLLGAIGSDGPQLVLEVTEREALPRDAQAQRNIRQLRELGVQWALDD 418 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG SS S+L+ L D LK+D+SF + +G+++VN+ V + II L QRL++++ AEG+ET Sbjct: 419 FGTGQSSLSYLQQLHADFLKVDRSFVSGVGTESVNAVVLETIIGLAQRLDLDVTAEGIET 478 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARH 521 +EQ +YL H V QGYL++ P+ + W + AR Sbjct: 479 REQEQYLCGHSVQWGQGYLFSPPLTAAELGAW-RNGRRGVARA 520 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 140/260 (53%), Gaps = 5/260 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 R+ + L E EL QP ++ R + IG E L+RW +P+ G +SP FIP Sbjct: 823 RILERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIP 882 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS 379 +AEE LIVP+ +V+ RQ + + Q V +NV+ F+ L L + + Sbjct: 883 LAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAA 942 Query: 380 A-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P QL +E+TE + + + I REL V++++DDFGTG S ++L+ D Sbjct: 943 HRLPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDS 1002 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 +KID+ F + + A ++ + +I++L LN ++AEGVE + Q +LRRHG +QG+ Sbjct: 1003 IKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGF 1062 Query: 497 LYAQPMPLRDFPKWLAGSQP 516 L+++P+P +F + LA Sbjct: 1063 LFSRPLPAAEFARLLAAGTR 1082 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 142/264 (53%), Gaps = 5/264 (1%) Query: 255 VGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 + R+ + + +F L QP ++ S Q IG E L+RWN+ G + Sbjct: 436 FSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMV 495 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKD 372 SP FIP+AEE LI+PL +V+ RQ + + + +N++P RG +++ Sbjct: 496 SPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEV 555 Query: 373 LNQYW-FSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWL 429 + + + Q L LEITE DV+ + +L VK+++DDFGTG SS S+L Sbjct: 556 VERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYL 615 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + D LKID+SF I +D ++ + II+LG+ LN+ ++AEG+ET++Q ++L +G Sbjct: 616 KRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANG 675 Query: 490 VHILQGYLYAQPMPLRDFPKWLAG 513 QGYL ++P+P ++F L Sbjct: 676 CDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 5/268 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R+ + L + L QP ++ ++ IG+E LLRW +P G Sbjct: 428 FFSKGMNRMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLRWESPELGR 487 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP FIP+AEE LI+P+ +V+ RQ + + + +N++ F++ I Sbjct: 488 VSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFKQAGFID 547 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSW 428 L+ S + L +E+TE + D + ++ + +KLAIDDFGTG S S+ Sbjct: 548 RLDAIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSY 607 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ D +K+D+SF I + ++ +T+ IIA+ L IE++AEG+ET+EQ +L+ Sbjct: 608 LKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAFLKDR 667 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQP 516 QGY + +P+P+ + LA P Sbjct: 668 ACEEGQGYYFGRPVPVETAAEILAQQYP 695 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 5/268 (1%) Query: 252 SLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQ 311 +A + + L + + L QP ++ + +G E LLRW +P Sbjct: 880 FCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPEL 939 Query: 312 GWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVL 369 G ISP FIPIAE++ I+P+ +V+ I+Q + S + +N++ + FR+ L Sbjct: 940 GSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNL 999 Query: 370 IKDLNQYWFSAHPIQQ-LILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSF 426 ++ + + + L LE+TE A+ D I +LH +K++IDDFGTG SS Sbjct: 1000 MELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSL 1059 Query: 427 SWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 S+L+ + LKID+SF I D + + II + L ++ +AEGVET Q +LR Sbjct: 1060 SYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLR 1119 Query: 487 RHGVHILQGYLYAQPMPLRDFPKWLAGS 514 G + +QGY +++P+P F +L Sbjct: 1120 LQGCNEVQGYYFSKPLPAEQFVSYLQKQ 1147 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 91/251 (36%), Positives = 137/251 (54%), Gaps = 5/251 (1%) Query: 280 HEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAE 339 +EF L QP ++ + Q +G+E L+RW++P G I P FIP+AEE LI PL+ +V+ E Sbjct: 790 NEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLRE 849 Query: 340 TIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDAL 396 RQ + V +N++ F++ + K + Q + Q L LE+TE + Sbjct: 850 ACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIM 909 Query: 397 LDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNS 454 + + + ELH + LAIDDFGTG SS S+L+ D LKID+SF + IG + + Sbjct: 910 RNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDE 969 Query: 455 TVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 T+T IIAL LN++++AEGVET Q +L+ +QGY +A+P+P P L Sbjct: 970 TITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQRG 1029 Query: 515 QPPPARHNGHI 525 PA + Sbjct: 1030 SQSPAMETADV 1040 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 139/258 (53%), Gaps = 4/258 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A +M+ E+N LA+ EF L QP ++A+S +GVE L+RW++P +G + PD FI Sbjct: 545 AVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFIS 604 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-F 378 +AEE LIVP+ +V+ +Q + V +N++ F + + + + Sbjct: 605 VAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQ 664 Query: 379 SAHPIQQLILEITERDALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + + L LEITE + + +EL + V +AIDDFGTG SS +L+ + L Sbjct: 665 TRLAPEYLELEITESSMIDVHRATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRL 724 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + N + II++ L + ++AEGVET+E+ +L+ H +QGYL Sbjct: 725 KIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYL 784 Query: 498 YAQPMPLRDFPKWLAGSQ 515 +++P+P D +L + Sbjct: 785 FSRPLPSEDVAFYLQAQK 802 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 139/263 (52%), Gaps = 8/263 (3%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 +A R ++ LA+ +F L Q + + G E+LLRW +P++G Sbjct: 562 FFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGE--RLTGAEVLLRWQHPQRGM 619 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLI 370 +SP FIP+AEE LI+PL +V+ Q + P + + +NV+ FR+ + Sbjct: 620 VSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQNDFV 679 Query: 371 KDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 + + Q+L LE+TE + +V+ I L + V ++DDFGTG SS S Sbjct: 680 DQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLS 739 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ L D LKID+SF + +D+ ++++ I+AL L + ++AEGVET+ Q +L Sbjct: 740 YLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLAS 799 Query: 488 HGVHILQGYLYAQPMPLRDFPKW 510 G H QGY +++P+P+ DF + Sbjct: 800 SGCHTYQGYYFSRPLPIEDFESF 822 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 13/307 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLSL--------LVGYIAWLATAYRMSFSREINLG 276 +I + + + + L +A+ + +A R+ + Sbjct: 995 SIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQA 1054 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L++++FEL QP ++ + + +G E LLRW +P G ISP FIP+AEE LI+ + +V Sbjct: 1055 LSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWV 1114 Query: 337 MAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA-HPIQQLILEITER 393 + ++Q + + V IN++ FR+ L + + Q A + LE+TE Sbjct: 1115 LRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTES 1174 Query: 394 DALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 A+ + I +LH ++++IDDFGTG SS S+L + + LKID+SF + D Sbjct: 1175 VAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDI 1234 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 + + II L + + +AEGVET Q +LR G + +QGY +++P+ + F ++ Sbjct: 1235 ESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAFV 1294 Query: 512 AGSQPPP 518 G P Sbjct: 1295 LGHAEIP 1301 >UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KH05_AERHH Length = 513 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 146/517 (28%), Positives = 253/517 (48%), Gaps = 16/517 (3%) Query: 8 IKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAG 67 ++ R++ +C + +L + ++ +Q+ A A+ ++D L Sbjct: 6 LRRSNMPRLLASLLCCATLILISLVTLYWQTWSMTRQQAQTAAERAMTQIDSALHHSTLA 65 Query: 68 SEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAEL 127 ++ LPL PC LR A VRS+ L ++G LYCSSIF D+ L Sbjct: 66 AKAALPLASRPCREVARELRVLVATSPYVRSVNLSRNGRLYCSSIFDEI-----DLKDRL 120 Query: 128 PAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSA 187 Q L + P L+ + + G + V+ IN L+ L + Sbjct: 121 QNSQHELLRLEAVTQLGRKPSLLFYHLSEG--DHAVVVAINPYHLSKPLQWHLAG--PHS 176 Query: 188 SLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALA--WHYLPTQL 245 + + ++ L + D P NY++ S F +++N P + LA + + Sbjct: 177 WVQIGEQWLDLQGKVHDGQPPRLRGFNYRLDSATFGYSLNQGFPLSAVLAMTLQKQGSMV 236 Query: 246 PLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLR 305 L + L L G + ++ + ++E+ + + EF + QP++ +++ Q G E+L+R Sbjct: 237 LLILALGGLAGLATYRWWSHISTPTQELRRAIIKQEFVPYLQPIVVSQNGQLHGCEVLMR 296 Query: 306 WNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRH--VFPMSSQFHVGINVAPSH 363 W + RQG I PD+FIP+AEE LI+ +T+ +M + Q + +FH N+ H Sbjct: 297 WQHHRQGLIRPDLFIPLAEESGLIILMTQTLMQQVRLQFAPHAAALPPRFHFSFNICARH 356 Query: 364 FRRGVLIKDLNQYWFS-AHPIQQLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFG 420 ++ L+ D + + L+LE+TER+ + + R+ EL + V++ +DDFG Sbjct: 357 CQQLSLLDDCRSFLAAFTANPITLVLELTERELITPNHLTERLFEELRQMGVRIGLDDFG 416 Query: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 TG+SS ++L+ D LKID+SF A IG++A++ + D I+L RL ++ +AEGVETQE Sbjct: 417 TGHSSLTYLQQFHVDYLKIDQSFVAMIGTNALSRHILDSTISLATRLGLQTIAEGVETQE 476 Query: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 QA +L V LQGYLY +P+ + F + L+ + P Sbjct: 477 QADFLVERQVDYLQGYLYGRPLTPQQFLQQLSPTPAP 513 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 133/267 (49%), Gaps = 5/267 (1%) Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 +A + ++ L E L QP ++ +G E LLRW +P+ G Sbjct: 1132 CFFTAEMQERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLG 1191 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLI 370 +SP FIPIAEE LI+P+ +V+ + Q V+ V +N++ FR+ L Sbjct: 1192 MVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLT 1251 Query: 371 KDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 +++ Q L LE+TE A+ + I +L V+++IDDFGTG SS S Sbjct: 1252 DVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMS 1311 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ R LKID+SF A + +D + + I+L + L ++ +AEGVE++ Q +LR Sbjct: 1312 YLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRA 1371 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGS 514 G QGYL+++P+ F ++ Sbjct: 1372 KGCDEAQGYLFSRPLAPAQFAAFVRAH 1398 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 4/259 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 A R+S + L EF L QPL+ S + +G E+L+RW P + + P FI Sbjct: 622 RAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFI 681 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 P+AEE LIVPL +V+ E RQ + + + +N++P F R L+ + + Sbjct: 682 PLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQG 741 Query: 379 SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S P QL LE+TE + + + L R V LAIDDFGTG SS ++L+ D Sbjct: 742 SGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDK 801 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + D+ ++ + IIA+ + L +E +AEGVET +Q +LR+ G QGY Sbjct: 802 LKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGY 861 Query: 497 LYAQPMPLRDFPKWLAGSQ 515 L++ P+P F +WL + Sbjct: 862 LFSPPLPAEAFERWLRDGR 880 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 88/273 (32%), Positives = 138/273 (50%), Gaps = 6/273 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARS-QQCIGVEILLRWNNPRQG 312 L +A+ + + L ++E L QP ++ + GVE L+RW +P G Sbjct: 770 FFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEFG 829 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLI 370 +SP FIPIAE LI+P+ +VM + Q + ++ VG+N++ FR+ L Sbjct: 830 LVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQNLP 889 Query: 371 KDLNQYWFS-AHPIQQLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFS 427 + + P L LE+TE + D + LHR V+++IDDFGTG SS + Sbjct: 890 ATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSSLN 949 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ R D LKID+SF + D + + I++L + L +AEGVE EQ +LR Sbjct: 950 YLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLRA 1009 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGSQPPPAR 520 G +QGYL+++P+P + WL +P A Sbjct: 1010 SGCQEVQGYLFSRPLPPDELAVWLRAWRPELAA 1042 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 84/266 (31%), Positives = 140/266 (52%), Gaps = 5/266 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + E+ + EF L+ QP ++++ + IG+E L+RW +P +G Sbjct: 1064 FFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGL 1123 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP VFIPIAEE LI + +V+ ++Q + + V +N++ F + L Sbjct: 1124 VSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYG 1183 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSW 428 + Q + L LE+TE A+ D + + +L+ V+L+IDDFGTG SS S+ Sbjct: 1184 SVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSY 1243 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ + D LKID+SF IGS ++ + II++ + L+ + +AEGVET EQ +L + Sbjct: 1244 LKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIAN 1303 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGS 514 +QGY +++P+P + K LA Sbjct: 1304 SCDEIQGYYFSKPLPSTEVTKLLANQ 1329 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 94/277 (33%), Positives = 142/277 (51%), Gaps = 5/277 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 L A A R+ E+ + E L QP ++ +G E L+RW +P G Sbjct: 752 LYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGM 811 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP FIP+AEE LI+ L + + E RQ V+ + V +N++ F++ Sbjct: 812 VSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTA 871 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + ++ P Q L LE+TE + DV+ I EL V+L+IDDFGTG SS ++ Sbjct: 872 VVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLNY 931 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ D+LKID+ F + +D ++ + IIALG+ LN+ L+AEGVETQ Q YL Sbjct: 932 LKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHAA 991 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHI 525 GV +QGY +++P+P D +LA P + Sbjct: 992 GVDFIQGYYFSRPLPAEDMATYLAQRLLPVSLSEAGP 1028 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 154/320 (48%), Gaps = 11/320 (3%) Query: 205 SLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSL----LVGYIAW 260 S P D+ V+S +I N L A Sbjct: 890 SEPFTVDDHIVSVTSS-IGISIFPNDGRDFNRLISQSEAALQKAKAAGKDTYNFFTEQMN 948 Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + M ++ + EF ++ QP ++ +++ IG E L+RW +P+ G + P FI Sbjct: 949 INALEHMQLQGQLRHAIINQEFRIYYQPQIDTLNERMIGAEALVRWQHPQHGLVPPLKFI 1008 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFP---MSSQFHVGINVAPSHFRRGVLIKDLNQYW 377 P+AE LI+PL +V+ E RQ V+ + +N++ F+RG +++ + Q Sbjct: 1009 PLAERSGLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRGNIVETVIQAL 1068 Query: 378 F-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 S P + L LE+TE L DV+ + L +KL+IDDFGTG SS S+L+ L Sbjct: 1069 ERSGLPAENLELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAV 1128 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 D LKID+SF + D ++ + II LG L + ++AEGVET+ Q + L+ + +Q Sbjct: 1129 DKLKIDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQ 1188 Query: 495 GYLYAQPMPLRDFPKWLAGS 514 GYL+++P+P DF + Sbjct: 1189 GYLFSRPIPAEDFSGLFEQA 1208 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 100/365 (27%), Positives = 169/365 (46%), Gaps = 35/365 (9%) Query: 163 VMEMINIDLLT--AMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQ 220 ++ ++ L + + ++ + VD L + D YQ Sbjct: 584 ILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDS 643 Query: 221 RFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQH 280 I P A A R++ ++ + Sbjct: 644 GRN-AIRFFDPEMQA--------------------------AITSRVALEADLREAVEAG 676 Query: 281 EFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAET 340 +F+L+ QP + S + G E LLRW++ R+G + P FIP+AEE LI+PL ++V+ Sbjct: 677 QFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETA 736 Query: 341 IRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDAL 396 Q + P +Q V +NV+ R+ + + + Q+L LE+TE + Sbjct: 737 CAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLV 796 Query: 397 LDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNS 454 +V+ IA+ L + V ++DDFGTG SS S+L+ L D LKID+SF + +DA ++ Sbjct: 797 SNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDA 856 Query: 455 TVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 + +I+AL + L + ++AEGVET+EQ +L G H QGYL+++P+PL F +W+ Sbjct: 857 AIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQWIGKP 916 Query: 515 QPPPA 519 P + Sbjct: 917 TAPAS 921 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 135/258 (52%), Gaps = 5/258 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 A+ R+ + + + EF LF QP + + + IG+E L+RW +P QG +SP Sbjct: 449 LNTASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMVSPGE 508 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDL-NQ 375 FIP+AEE L++P+ ++ + E RQ V+ + + +N++ FR + + Sbjct: 509 FIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRT 568 Query: 376 YWFSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 S P L LE+TE A+ DV+ + L R V LAIDDFGTG SS S+L+ Sbjct: 569 VGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFP 628 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D LKID+SF D ++ + I L LN+E++AEGVE EQ ++L + + Sbjct: 629 IDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEI 688 Query: 494 QGYLYAQPMPLRDFPKWL 511 QGY Y +P+ F ++ Sbjct: 689 QGYFYGRPLSGDKFEMFM 706 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 13/301 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLSL--------LVGYIAWLATAYRMSFSREINLG 276 +I ++ L L A+ + A + ++ + Sbjct: 811 SIGISVYPDDGLDTASLLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLTLENNLRRA 870 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 + ++EF L QP ++ RSQ+ IG E ++RW +P G +SP FIP+AEE LI+ + ++ Sbjct: 871 VERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWI 930 Query: 337 MAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITER 393 M E+ RQ + V +N++ FR L + + S L LEITE Sbjct: 931 MRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITES 990 Query: 394 DALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + + + + + H + IDDFGTG SSF +L+ D LKID+SF I D Sbjct: 991 MIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDV 1050 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 + +T IIA+ L I++VAEGVETQEQ +L++ G +QG+L+++P+ DF + L Sbjct: 1051 DDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFVRML 1110 Query: 512 A 512 Sbjct: 1111 K 1111 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 142/262 (54%), Gaps = 4/262 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + ++ R+ E+ + L + +FEL+ QP + + +GVE L+RW++P++G Sbjct: 357 MFSAEMHHKSSTRLLLETELRVALEEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGL 416 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKD 372 + P FIP+AEE LIV + +V+ E RQ + + +N++ FR+ L++ Sbjct: 417 LCPSSFIPVAEETGLIVRIGEWVLREACRQAMEWKALGVPLRMSVNLSGRQFRQENLVQT 476 Query: 373 LNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWL 429 + + + L LEITE + D + +L + LAIDDFGTG SS ++L Sbjct: 477 MTKIIERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYL 536 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + LKID+SF I +D + +T I + L +E+VAEGVET+ Q ++LR G Sbjct: 537 KRFPVSRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQG 596 Query: 490 VHILQGYLYAQPMPLRDFPKWL 511 ++QGYL+++P+ R+ + + Sbjct: 597 SDMVQGYLFSRPVSAREMAELV 618 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 92/274 (33%), Positives = 143/274 (52%), Gaps = 5/274 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 L R+ ++ L + E L QP ++ +S + +GVE LLRW +P +G Sbjct: 596 FFTQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGA 655 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 ++PDVFIP+AE+ LI+ + + + Q ++ + +N++ F++ L Sbjct: 656 VAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPS 715 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 L + L LEITE A+ D + I R L V+LAIDDFGTG SS S+ Sbjct: 716 LLADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSY 775 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ + LKID+SF I +D+ ++ + IAL L E+VAEGVET+ Q ++LR Sbjct: 776 LKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQ 835 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHN 522 ILQGY +++P+ +LA ++ PPA N Sbjct: 836 QCDILQGYFFSEPLSAAGIASYLAANRRPPALVN 869 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 143/261 (54%), Gaps = 5/261 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + R+S +N L +FEL+ QP L+ +S + IG E L+RWN+P +G ISPD FIP Sbjct: 672 SLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIP 731 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS 379 +AEE LIV + +V+ + Q + Q V +N++ ++ +++ Sbjct: 732 LAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIRE 791 Query: 380 -AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P L LE+TE + + + I ++H +++++DDFGTG SS S+L+ D Sbjct: 792 YGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDK 851 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF I D ++ + II++ LN++++AEGVET Q + LR +G QGY Sbjct: 852 LKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGY 911 Query: 497 LYAQPMPLRDFPKWLAGSQPP 517 L+A+P+P+ + L S Sbjct: 912 LFAKPLPVEQMTEHLLASPCQ 932 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 84/269 (31%), Positives = 141/269 (52%), Gaps = 5/269 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 ++ + ++EF L+ QP ++ R+ Q +G E L+RW +P G Sbjct: 482 FFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGL 541 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 ++PD FIPIAE+ LI P+ +VM E RQ + + + V +N++ R+ ++ Sbjct: 542 VAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQ 601 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 ++++ S L LE+TE A+ I +L VKLA+DDFGTG SS S+ Sbjct: 602 EVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSY 661 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L + +KIDKSF I +D ++T+ II + L + ++AEGVE Q ++L++ Sbjct: 662 LKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKE 721 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 G +QG++ ++P+P +F L P Sbjct: 722 GCDQMQGFIASRPVPADEFALLLQNWPTP 750 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 91/268 (33%), Positives = 138/268 (51%), Gaps = 5/268 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + R+ + E+ LA EF L QP +N + + E LLRWN+P +G Sbjct: 505 VFTEEMAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGI 564 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 ISP VFIP+AEE LIVP+ + + RQ + + + +NV+ FR Sbjct: 565 ISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISVNVSARQFRERNWAS 624 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + + + L LE+TE + DV I L V LAIDDFGTG SS S Sbjct: 625 RVAEILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSA 684 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ LKID+SF I DA + +T II+L Q+L + ++AEGVE++ Q ++L++ Sbjct: 685 LKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKA 744 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQP 516 G +QGY +++P+ F L+ ++P Sbjct: 745 GCDEIQGYFFSRPLSAEAFESLLSSARP 772 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 14/361 (3%) Query: 169 IDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRF-PFTIN 227 + + +L L D R + +L + + + + + + Sbjct: 878 KQYVRSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFG 937 Query: 228 VNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAY-------RMSFSREINLGLAQH 280 + + L +A+ + G + + + + L ++ Sbjct: 938 ICLSETDNVDGTILLRNADIAMYKAKAEGCGLYFYSHEMNEHLIKTLEMENSLRQALEKN 997 Query: 281 EFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAET 340 EF+L+ QP + + + IG E LLRW +P++G I P FIP+AEE LIV + +V+AE Sbjct: 998 EFQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEA 1057 Query: 341 IRQRHVFPMSS--QFHVGINVAPSHFRRG-VLIKDLNQYWF-SAHPIQQLILEITERDAL 396 RQ ++ + +N++ F +G LI+ + S QL LE+TE + Sbjct: 1058 CRQSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVM 1117 Query: 397 LDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNS 454 D R R++ + V L++DDFGTG SS ++L + D LKID+SF I SDA ++ Sbjct: 1118 KDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSA 1177 Query: 455 TVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 + + IIA+ L ++ VAEGVE +Q + G + +QGYL+++P+P DF + Sbjct: 1178 AILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALFLAN 1237 Query: 515 Q 515 + Sbjct: 1238 K 1238 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 85/273 (31%), Positives = 138/273 (50%), Gaps = 5/273 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 RM ++ ++EF L+ QP + + GVE LLRW +P +G +SPD Sbjct: 431 MHEGARDRMFLEIDLRHATLRNEFVLYYQPKASCADGRITGVEALLRWQHPERGIVSPDQ 490 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQY 376 FIP+ EE LIV + R+V+ E RQ + + V +N++ + L+ D+ Sbjct: 491 FIPLLEETGLIVQVGRWVLEEACRQAVEWQAAGLNIPSVSVNLSARQLQAETLLTDVAAT 550 Query: 377 WF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + L LEITE + + D I L + V +++DDFGTG SS ++L+ Sbjct: 551 LEKTGLNAACLDLEITESMLMDNADMAIQTLSALKKMGVTISLDDFGTGYSSLAYLKRFP 610 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D +K+D+SF I +D+ ++++T +I + L +++VAEGVET EQ L H ++ Sbjct: 611 LDAIKVDRSFVQDIAADSDDASITRAVITMAHHLKLKVVAEGVETPEQLALLISHQCDVI 670 Query: 494 QGYLYAQPMPLRDFPKWLAGSQPPPARHNGHIT 526 QGY +++PMP + L + P T Sbjct: 671 QGYFFSRPMPASGMTELLVSDRRLPDNMLRSGT 703 >UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2VIJ7_ERWT9 Length = 539 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 145/535 (27%), Positives = 246/535 (45%), Gaps = 18/535 (3%) Query: 7 IIKTY----RRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLL 62 ++ + R + I L L + + + + Q + +V+ Sbjct: 6 TVRRHALQPHRVVFLSAGISFLSFLLF-IVISVAVTCHQRAEAHNQLIGQTRSYVIRVMD 64 Query: 63 PLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVD 122 L+ L C L +QAA +R I LV + +CSS G N + Sbjct: 65 ELKQILLPLQAETFDHCDRVRDDLAEQAASTPNIRYILLVNNNAAFCSSASGPMNNEIHQ 124 Query: 123 ILAELPAPQPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQL 181 I + + +RL +++G P ++ W + GV+ +N+++ +LL Q Sbjct: 125 ISPFTNDNKAVDIRLVSGAPMLRGKPAMVLWLRNPTTPGNGVLATLNLNMTPYLLLASQQ 184 Query: 182 PQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYL 241 + + ++ + N V + N +++ +P + G H + Sbjct: 185 RENTGMAIVTGDTAITTWNEQVINTDALPPNPLRRIAIPGYPMMLYFYGEILPERDLHII 244 Query: 242 PTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 + +L+++LV I ++ R+ +EI G+ + EF + QP++ S G+E Sbjct: 245 ---IMAGLLVAVLVASICYVLFRLRLRPGKEIMQGIRRGEFHVEYQPIIATGSDTAYGLE 301 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINV 359 L+RW +P +G + D FI AE +LIVPLTR++ A R H +GIN+ Sbjct: 302 ALMRWVHPTEGRVPADAFISYAEGQNLIVPLTRHLFALIARDAHQLCKVVPVGTKLGINL 361 Query: 360 APSHFRRGVLIKDLNQYWFSAHPIQQLI--LEITERDALLDV-DYRIARELHRKNVKLAI 416 +PSH KD+ Q+ P+ EITER + + + +H++N+K+AI Sbjct: 362 SPSHLTNPDFRKDVRQWLA-MMPVDHFEYVFEITERTMVSESNADEMFDWIHQQNIKIAI 420 Query: 417 DDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGV 476 DDFGTG+S+ +LE D LKID+ F +IG V S V D ++ L + L ++ VAEGV Sbjct: 421 DDFGTGHSALLYLEKFHFDYLKIDRGFVQSIGMKTVTSPVLDTVLTLARELKLKTVAEGV 480 Query: 477 ETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPP---ARHNGHITPI 528 ET QA++L GV LQGY Y++P+ ++ K+ +GSQP A +G I P+ Sbjct: 481 ETNAQAQWLINRGVTHLQGYFYSRPLGVQQLAKYFSGSQPASEDCADISGSIAPV 535 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 88/258 (34%), Positives = 129/258 (50%), Gaps = 4/258 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 A R+ + GL + EF L QP++ + +G E L+RWN+P +G Sbjct: 552 FYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGM 611 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKD 372 I+P FIP+AEE LIVPL +V+ RQ + + +N++ FR G L Sbjct: 612 IAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGDLTAT 671 Query: 373 LNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWL 429 + + P L LEITE + D D + L V+L+IDDFGTG SS ++L Sbjct: 672 VRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYL 731 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + D LKID+SF I D + + ++A+ ++ + ++AEGVET EQ +LR G Sbjct: 732 KRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLG 791 Query: 490 VHILQGYLYAQPMPLRDF 507 QGYL +P DF Sbjct: 792 CEAYQGYLVGRPQAAADF 809 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 9/303 (2%) Query: 220 QRFPFTINVNGPGATALAWHYLPTQLPLAVLLS----LLVGYIAWLATAYRMSFSREINL 275 ++ + A+ T + A A R+ ++ Sbjct: 264 ASIGISVYPSDGEEAAILLKNADTAMARAKAAGKNTYQFFKAEMNKAAFERLMLENQLRK 323 Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L+ +E L+ QP + S Q +G+E LLRW +P G SP F+P+AEE LIVP+ + Sbjct: 324 VLSNNELILYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVPVAEEMGLIVPIGEW 383 Query: 336 VMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITE 392 V+ +Q + V +NV+ F R L++ + + S L LE+TE Sbjct: 384 VLRTACQQNQTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEALADSNLNPIYLELELTE 443 Query: 393 RDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD 450 + + + + E+ V +AIDDFGTG SS S+L+ DVLKID+SF I SD Sbjct: 444 SVLMAEESGIFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVLKIDRSFVKDICSD 503 Query: 451 AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 ++ +T IIA+ L + +VAEGVETQ Q +L++ ++QGY +++P+ + Sbjct: 504 GNDAAITTAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYYFSRPICSEKMTQT 563 Query: 511 LAG 513 L Sbjct: 564 LQR 566 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 139/263 (52%), Gaps = 5/263 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + ++ + L +++ +L QP ++ S + +G E LLRW++P G Sbjct: 591 FFTAEMQARSERTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHPELGA 650 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVG--INVAPSHFRRGVLIK 371 + P FIP+AE LI+P+ +V+ +++Q + + + +N++ FR L + Sbjct: 651 VPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHADLPE 710 Query: 372 DLNQYWFSA-HPIQQLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSW 428 + A P L LE+TE A+ D + LH + V+++IDDFGTG SS S+ Sbjct: 711 LVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSY 770 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ R +KID+SF I D+ + + II++ L ++ +AEGVET+ Q ++L+ Sbjct: 771 LKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAK 830 Query: 489 GVHILQGYLYAQPMPLRDFPKWL 511 G +QGY +++P+P+ F ++ Sbjct: 831 GCTEVQGYYFSRPLPVEQFEAFM 853 >UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W3W9_9CYAN Length = 560 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 5/265 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + ++ L + EF+L+ QP +N + Q G E L+RWN+P++G ISP FIP+ Sbjct: 296 SQEAFELEIQMRQALERQEFQLYYQPKVNLLTGQIEGAEALVRWNHPQRGIISPVEFIPL 355 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AE+ LIVPL +V+ + Q V+ + +N++P F + L + + Sbjct: 356 AEKTGLIVPLGEWVLRQACHQARVWQDQGIYPLRIAVNLSPRQFNQSNLTNFVVDILHET 415 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LE+TE + + + I + ++++IDDFGTG S+ S L+ DVL Sbjct: 416 GLNPHYLELELTESTLVQNPESAIATLQTFKALGIRISIDDFGTGYSALSQLKKFPFDVL 475 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + D+ + +T I+ + + L +++VAEGVET Q +L+ H +QGY Sbjct: 476 KIDRSFVCQLTEDSRDEAITTAILQMARSLKLKVVAEGVETLSQLNFLKGHQCDEIQGYW 535 Query: 498 YAQPMPLRDFPKWLAGSQPPPARHN 522 ++ P+ F L+ + P + Sbjct: 536 FSPPLSAEAFADLLSTGKKFPLLSS 560 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 153/304 (50%), Gaps = 13/304 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLG 276 +I V+ A W L + LA+ ++ ++ I Sbjct: 245 SIGVSVFPDDATDWTTLLSFADLALEIAKENGGNTYCFYTNELKKTNEEKLYIQHSIRKA 304 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L Q+EF L QP+++ ++ + VE LLRW +P++GWISP FIPIAEE +LI P+ +V Sbjct: 305 LKQNEFTLHYQPIVDIQTGDIVAVEALLRWFHPKRGWISPATFIPIAEETNLIQPIGDWV 364 Query: 337 MAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFSA-HPIQQLILEITER 393 + Q + +G+NV+ F + L+K + + L LEITE Sbjct: 365 LRNVCEQSKKWKEKGLPHVQIGVNVSIKQFLQADLVKHIEHVLRTYDLDPFCLKLEITES 424 Query: 394 DALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 A+ +DY + L ++LA+DDFGTG SS ++L+ L D++KID+SF + + Sbjct: 425 MAMHHIDYVLAQLQSLKHLGLQLAVDDFGTGYSSLNYLKKLPVDIIKIDRSFVQDMVKHS 484 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 + ++ +I + L +++VAEGVET+EQ L+R G QGY +++P+ F + + Sbjct: 485 YDLSIVRAVIQVAHSLQMKVVAEGVETEEQLAILKREGCDRAQGYYFSKPLAAEQFEQLV 544 Query: 512 AGSQ 515 + Sbjct: 545 QQKK 548 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 135/263 (51%), Gaps = 7/263 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 T + ++ L Q E ++ QP +N ++ + GVE L+RWN+ G Sbjct: 665 FFSEGMDTRTFESIKLENDLYKALEQEELVIYYQPQINGKTNKIEGVEALIRWNHQEHGM 724 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIK 371 I PD FIPIAEE LIVP+ +V+ E RQ + + +N++ + L Sbjct: 725 IPPDKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQGSPLISMSVNLSARQLEQSDLFA 784 Query: 372 DLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + + LE+TE + + + + ++L + LAIDDFGTG SS + Sbjct: 785 MVKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYSSLGY 844 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L LKIDKSF + D ++ +T+ II L + LN++++AEGVET+EQ ++L Sbjct: 845 LKKLPISTLKIDKSFVQDMTKD--DAAITNTIITLAKNLNLDVIAEGVETKEQVEFLSAR 902 Query: 489 GVHILQGYLYAQPMPLRDFPKWL 511 +++QGY +++PM D K Sbjct: 903 NCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 5/256 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ ++ LA EF L Q ++ R + IG E L+RW++ +G ++PD FIP+ Sbjct: 808 ARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPL 867 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LIVPL +V+ + + V +N++ R L++ + + + Sbjct: 868 AEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRET 927 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P ++L LE+TE + + + R L V+L+IDDFGTG SS ++L+ L D L Sbjct: 928 GLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDEL 987 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+ F I D+ + + IIA+ + L + ++AEGVET EQ +L R G QGYL Sbjct: 988 KIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYL 1047 Query: 498 YAQPMPLRDFPKWLAG 513 + +P+P F + + Sbjct: 1048 FGRPLPAEAFAQVMRA 1063 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 4/253 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + + L + EF L QP +A++ + GVE L+RW+N G ISP FIP+AEE Sbjct: 561 LKLESLLYKALERDEFLLHYQPQYDAKTNRISGVEALIRWDNEELGMISPADFIPLAEET 620 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 LIVP+ +VM Q + + +N++ F + L + + + S Sbjct: 621 GLIVPIGEWVMRTACHQNKAWQDEGLPPMVMSVNLSIRQFYQPDLPQVIGKILEESGMAP 680 Query: 384 QQLILEITERDALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 + L LEITE A+ D I ++L + V++AIDDFGTG SS + L+ D LKID+S Sbjct: 681 ELLELEITESMAMHADSAISILKQLKQLGVRIAIDDFGTGFSSLNHLKKFPLDHLKIDRS 740 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F I + + II L LN+ +VAEGVE Q ++L+ H + QG+ +++P+ Sbjct: 741 FVDDICLGSEEQDIVKTIIMLAHNLNLRVVAEGVENDLQQQFLKDHRCDVFQGFHFSKPV 800 Query: 503 PLRDFPKWLAGSQ 515 P+ L Sbjct: 801 IRDAIPELLRKQT 813 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 88/256 (34%), Positives = 136/256 (53%), Gaps = 5/256 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + E+ L + Q + EL QP + + Q +G+E L+RWN+P +G I P FIP AEE Sbjct: 450 LWLETELRLAIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEET 509 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPI 383 LI+PL +V+ RQ + + +N++ F R L + + + P Sbjct: 510 SLIIPLGEWVLNTACRQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPA 569 Query: 384 QQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LEITE + DV+ +L ++L+IDDFGTG SS S+L+ LKID+ Sbjct: 570 TLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDR 629 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + + ++ + II+L + IE++AEGVET EQ +L+RH QGYL+ +P Sbjct: 630 SFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRP 689 Query: 502 MPLRDFPKWLAGSQPP 517 +P +D + L + P Sbjct: 690 LPAKDIERQLKTAHLP 705 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 96/317 (30%), Positives = 144/317 (45%), Gaps = 9/317 (2%) Query: 213 ENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSL----LVGYIAWLATAYRMS 268 N + I + + + A R++ Sbjct: 357 GNDIFCTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLT 416 Query: 269 FSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHL 328 + L + EF L QPLL S + +GVE LLRW++P G +SP FIP+AEE L Sbjct: 417 LETSLRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGL 476 Query: 329 IVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQQ 385 IVP+ +V+ Q + V +NV+ FR + + + Sbjct: 477 IVPIGEWVLRSACEQLRALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRY 536 Query: 386 LILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSF 443 L LE+TE + + I R+L + V LAIDDFGTG SS S+L+ D LKID++F Sbjct: 537 LELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTF 596 Query: 444 TAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 + D N+ + + I+AL LN+++VAEGVET EQ +L ++QGY A+P+P Sbjct: 597 VKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLP 656 Query: 504 LRDFPKWLAGSQPPPAR 520 R+ ++L Q A Sbjct: 657 PRNLLEFLEARQEDRAA 673 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 138/268 (51%), Gaps = 5/268 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R + L + E +L QP ++ + G+E LLRW +P +G Sbjct: 789 FFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGT 848 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP--MSSQFHVGINVAPSHFRRGVLIK 371 ISP FIP+AEE LI PL +V+ + RQ ++ +S V +N++ F + L K Sbjct: 849 ISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAK 908 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 ++ + + L LEITE L +++ I EL + V+ +IDDFGTG SS S+ Sbjct: 909 NIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSY 968 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L D +KI + F I +D + + IA+ + L ++L+AEGVE +Q +L H Sbjct: 969 LKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLH 1028 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQP 516 G H +QGY +A+PMP ++ P ++ Sbjct: 1029 GCHAMQGYYFAKPMPAQEVPSFIHSETC 1056 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 95/264 (35%), Positives = 143/264 (54%), Gaps = 5/264 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 A R+S + LA+ EF + QP ++ S IG+E LLRWN+ G ISP FIPI Sbjct: 590 AARRLSIESALRDALARDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISPVEFIPI 649 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LI+ + +V+ Q + HV +N++P FR+ L + S Sbjct: 650 AEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVAVNLSPRQFRQADLPAQVAHALAES 709 Query: 380 AHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P L LEITE + D+D +A +L +KL++DDFGTG SS +++ D + Sbjct: 710 GLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSRFPFDKI 769 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I ++ VN+ + I +G+ LN+ ++AEGVET+ QA +LR +QGYL Sbjct: 770 KIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCDAIQGYL 829 Query: 498 YAQPMPLRDFPKWLAGSQPPPARH 521 +++P+P +F L +P P Sbjct: 830 FSRPLPPEEFAPLLLSCKPLPIAA 853 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 86/267 (32%), Positives = 139/267 (52%), Gaps = 5/267 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + A R+ ++ L+++E L QP ++ S + IG E LLRW +P G Sbjct: 729 FFSADMNVRMAERLRLESDLRWALSRNELLLHYQPQVDINSGEIIGFESLLRWQHPELGM 788 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP FIP+AEE LI+P+ +V+ E RQ + + V +N++ F ++ Sbjct: 789 VSPVNFIPLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKVVAVNLSAVQFHGADIVA 848 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSW 428 ++Q S + L LEITE + D + RI EL V L+IDDFGTG SS S+ Sbjct: 849 LVSQSLQNSGLEARYLELEITESVIIEDPERVIRIMDELKMLGVGLSIDDFGTGYSSLSY 908 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ D +KID+SF + + ++ + ++I + + L +++AEGVET EQ ++LR H Sbjct: 909 LKRFPIDKIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVIAEGVETVEQLEFLRSH 968 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQ 515 QG+ + +P + P +A Q Sbjct: 969 HCDEYQGFYCSPGVPAGEIPDLVASRQ 995 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 429 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 13/303 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLSL--------LVGYIAWLATAYRMSFSREINLG 276 +I + L +A+ + T R + Sbjct: 317 SIGIALFPQNGRDAETLLKHADMAMYEAKNVGRNTYRFFSDELHRRTIERHKLEVGLRRA 376 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 + + EF L QP ++ + + + +E L+RW +P G + P FIP+AEE LI + ++ Sbjct: 377 VRKKEFFLVYQPQVDLGTGRIVALEALVRWQHPEAGVLLPSTFIPVAEETGLIHIMGEWI 436 Query: 337 MAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITER 393 + Q + + +N + FR+ L++ + Q S P L LEITE Sbjct: 437 LRTACHQAMQWQRMGLPPMRIAVNFSARQFRQPDLVERIEQILLESGLPPHHLELEITES 496 Query: 394 DALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + +++ I +L + +++AIDDFGTG SS ++L+ D LKI + F I D Sbjct: 497 VFMENLESAIETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRLKIAQDFVRDIPDDE 556 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 ++T+ + I+A+ RL I+++AEGVET EQ +LRR G H +QG+ +A+PM + +L Sbjct: 557 DDATIIETIMAMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFYFARPMQAEEIAGFL 616 Query: 512 AGS 514 Sbjct: 617 NQR 619 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 429 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 87/269 (32%), Positives = 140/269 (52%), Gaps = 6/269 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG- 312 + A RM+ + + EFEL+ QP + A + +G E L+RW P +G Sbjct: 784 FFQETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQPERGG 843 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLI 370 +SP FIP+AEE LI+P+ +V+ + RQ ++ + + +N++ F++ L Sbjct: 844 PVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLD 903 Query: 371 KDLNQYWFS-AHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFS 427 ++N P + L LEITE + DV +L + LA+DDFGTG SS S Sbjct: 904 DEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLS 963 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ D LKID+ F + +D + V II L L +E+VAEGVE +Q +LR+ Sbjct: 964 YLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQ 1023 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGSQP 516 G + QGY +++P+P ++F ++L Sbjct: 1024 RGCDVFQGYHFSRPLPAKEFEQFLRSQNA 1052 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 5/261 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 + + R+ + L +HEF L Q N ++ + GVE L+RW +P G ISP Sbjct: 319 LKVRSLERLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAH 378 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FIP+AEE LIV L R+V+ Q ++ + +N++ F LI D+ Sbjct: 379 FIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANA 438 Query: 377 W-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 S + L +EITE + D + I + V+LAIDDFG G SS + ++ Sbjct: 439 LRESGLAPELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFP 498 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D LK+D SF I ++ + +T+ IIA+G+ L++ ++AEGVETQEQ +LR Sbjct: 499 IDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQT 558 Query: 494 QGYLYAQPMPLRDFPKWLAGS 514 QGY +++P+ +F +++ Sbjct: 559 QGYYFSKPVSPEEFTRFMLAH 579 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 82/269 (30%), Positives = 133/269 (49%), Gaps = 5/269 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 A R+ E+ L Q+E L+ QP +N + + +E L+RW++P G I P Sbjct: 1218 METAAVKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSE 1277 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FIP+AEE LI + +++ E Q + FH+ +NV+ R L+ + Sbjct: 1278 FIPLAEETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTI 1337 Query: 377 W-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + P + L LEITE + I R L +K AIDDFGTG SS ++L++ Sbjct: 1338 LKETGLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFP 1397 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D+LKID+ F + S+ ++ + IIAL L +++VAEGVETQ Q ++L+ H Sbjct: 1398 VDILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRF 1457 Query: 494 QGYLYAQPMPLRDFPKWLAGSQPPPARHN 522 QG+ ++P+ + + + + Sbjct: 1458 QGFYLSEPLSAAEIEQAILSWGREKGCSS 1486 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 6/260 (2%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 R+ ++ L + EF L QP + + + IG E L+RW +P +G +SP Sbjct: 786 MNQYAQERLELELDLRKALERDEFVLHYQPQFD-PNGRIIGCEALIRWQHPDKGLLSPGE 844 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQY 376 FI +AE LIVP+ ++V+ Q ++ ++ +N++ F L++ + Sbjct: 845 FINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNA 904 Query: 377 WFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + L LE+TE +++V+ I + + ++IDDFGTG SS S L+ Sbjct: 905 ITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFP 964 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 + LKID+SF + D + + II + LN+ ++AEGVET EQ ++L+ Sbjct: 965 VNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEF 1024 Query: 494 QGYLYAQPMPLRDFPKWLAG 513 QGY +++P+ D ++L Sbjct: 1025 QGYYFSRPILAADIEQYLQA 1044 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 100/374 (26%), Positives = 168/374 (44%), Gaps = 35/374 (9%) Query: 148 VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLP-QISSASLTVDKRHLLYGNGLVDSL 206 V+++ A E + +L ++ + QL S ++ + +D L Sbjct: 666 VMLEDLSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDEL 725 Query: 207 PQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYR 266 + D YQ T+ P + + R Sbjct: 726 LKQADIAMYQAKKAGRN-TMRFFDPRMQQ--------------------------SLSAR 758 Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ E+ + + +F+L+ Q ++ + + +G E LLRW +P G ++P FIP+AEE Sbjct: 759 LALELELRKAIEKDQFQLYYQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEET 817 Query: 327 HLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS-AHP 382 LIVP+ +V+ Q + P++ + INV+ F + + + Sbjct: 818 GLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGID 877 Query: 383 IQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L LE+TE L +VD I L + V ++DDFGTG SS +L+ L D LKID Sbjct: 878 PALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKID 937 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF I SD+ + + IIA+ Q + + ++AEGVET+EQ + L R G + QGYL+++ Sbjct: 938 QSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSK 997 Query: 501 PMPLRDFPKWLAGS 514 P+P+ F K L Sbjct: 998 PVPVEQFEKLLHRG 1011 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 4/261 (1%) Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 L + R++ + + E ++ QP ++ S + IGVE L+RWN+P +G Sbjct: 542 LFYTTDFDAQLLENIEIERDLRKAIERKELVVYYQPQFHSESNRMIGVEALVRWNHPTKG 601 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLI 370 +SP VFIPIAEE LI + +V+ E RQ + V +N++ F + L+ Sbjct: 602 MLSPGVFIPIAEETGLIYEIGTWVLREACRQMKQWHDKGGPLIPVSVNLSSHQFHQRNLV 661 Query: 371 KDLNQYWFSA-HPIQQLILEITERDALLD-VDYRIARELHRKNVKLAIDDFGTGNSSFSW 428 + + L LEITE + V I EL++ ++++DDFGTG SS S+ Sbjct: 662 QYIKNILEETKLAPHFLELEITESMMMDPAVSISILHELNKIGTRISLDDFGTGYSSLSY 721 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ LKID+SF + + + + II++ + L ++++AEG+ET++Q L + Sbjct: 722 LKKFPIHKLKIDRSFITDLSRNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTEN 781 Query: 489 GVHILQGYLYAQPMPLRDFPK 509 +QGY Y++P+ + + Sbjct: 782 HCKEIQGYYYSRPLSANEVEQ 802 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 5/263 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 + ++ L F L QP + S + G E L+RWN+P +G ISPD Sbjct: 499 MDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDD 558 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FIP+AEE LI+ L +V+ E RQ + + +N++ F + ++ + Sbjct: 559 FIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTI 618 Query: 377 WFSA-HPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 L LE+TE + D D + EL + L++DDFGTG SS ++L Sbjct: 619 LHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFP 678 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D LKID+SF + SDA ++V + +I + L I +AEGVET+EQ +L + Sbjct: 679 IDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSI 738 Query: 494 QGYLYAQPMPLRDFPKWLAGSQP 516 QGYL+++P+P D LA P Sbjct: 739 QGYLFSKPLPANDLAALLANPTP 761 >UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9XWJ5_CROTZ Length = 520 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 152/510 (29%), Positives = 248/510 (48%), Gaps = 15/510 (2%) Query: 14 NRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQ---FANHAVEELDKVLLPLQAGSEV 70 ++I+ I LA TL + ++ L+QQR Q A L+ L+A ++ Sbjct: 15 RKIILVGIA--TGLALTLMITLAARGWLHQQRENQYDMLARDIHHYLNTYFAQLKASADA 72 Query: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 L PL C L +AA VR+ L++DG YCSS G ++P+ D++ ++ Sbjct: 73 LQPLTLAECGAVSAELTSRAAFNVNVRAFLLIRDGVAYCSSATGKLHLPLRDLVPDIDTR 132 Query: 131 QPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASL 189 + + + + ++ P ++ W G++ +N++L ++ + ++ +L Sbjct: 133 KTVDISIIPGTPMMPDKPSIVMWFGNPLMEGRGIVTTLNVNLTPYLIYTARQNDLNGLAL 192 Query: 190 TVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAV 249 R L +G V + + S Q +P + + G A H L Sbjct: 193 VAKDRALTTFSGKVMTPDELPAEPLRSESVQGYPLKLYLYGDTMPAEDRHLALLLGLLIG 252 Query: 250 LLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNP 309 +L + I LA R REI + +++F + QP+++A ++Q GVE L+RW +P Sbjct: 253 VLGGALTVIL-LALRARSG--REILSAIKRNQFFVVYQPVVDAATRQIRGVEALMRWEHP 309 Query: 310 RQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRG 367 G I PD FI AE LIVPLT ++ + +GIN+AP H Sbjct: 310 SAGMIPPDAFISFAEAQGLIVPLTHHLFKLIAQDVPRLQQSLPPGAKLGINIAPGHLHSE 369 Query: 368 VLIKDLNQYWFSAHPIQQ--LILEITERDALLDVDY-RIARELHRKNVKLAIDDFGTGNS 424 D+ + S P L+ EITERD + + + + LH + ++A+DDFGTG+S Sbjct: 370 QFKADIQKLHAS-LPPDYFQLVFEITERDMIREEEAMDLFTWLHEQGHEIAVDDFGTGHS 428 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 + +LE D LKID+ F AIG++ + S V D +I+L +RLN+ VAEGVETQEQAK+ Sbjct: 429 ALIYLERFTLDYLKIDRGFVNAIGTETITSPVLDAVISLAKRLNMVTVAEGVETQEQAKW 488 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 L GV+ LQGY +++P+ D P + + Sbjct: 489 LTVRGVNFLQGYYFSRPVRAADLPASMKEA 518 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 144/260 (55%), Gaps = 5/260 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A ++ ++ + LA+ E + QP ++ ++ + +G+E L+RW++P G I P FIP Sbjct: 441 AALRSLTLEGDLRMALARRELFVEYQPEIDLKTGETVGLETLVRWDHPTLGLIPPLDFIP 500 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 +AEE LI+P+ ++++ Q ++ S V +N++ FR+ LIK + + Sbjct: 501 LAEETGLILPIGEWILSIACMQNAIWHKSGLEPIRVAVNLSGHQFRQRNLIKTIAKTLTN 560 Query: 379 SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S Q L LEITE + + I +EL V+LA+DDFGTG SS S+L DV Sbjct: 561 SRLDPQHLELEITESTLMENAASTIHTVKELKSMGVRLAVDDFGTGYSSLSYLRRFPLDV 620 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + +A ++ +T IIA+ LN+E++AEGVE ++Q ++L+ + + QGY Sbjct: 621 LKIDRSFIRDVTINADDAAITRAIIAMAHNLNLEVIAEGVENEQQLQFLQENNCDMAQGY 680 Query: 497 LYAQPMPLRDFPKWLAGSQP 516 Y +P+ K L Sbjct: 681 YYCRPLTPAKLTKHLEKQSS 700 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 89/264 (33%), Positives = 136/264 (51%), Gaps = 5/264 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 T R+ + L Q+EF L QPL+N + IGVE L+RW +P G Sbjct: 315 FYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGL 374 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 I PD FI +AEE LI P+ +V+ E RQ + + + +NVAP FR+ ++ Sbjct: 375 IMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVE 434 Query: 372 DLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + +L LE+TER + D D + LHR V+L++DDFGTG SS ++ Sbjct: 435 MVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAY 494 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ LKID+SF + +D + + I+++G+ L + ++AEGVE EQ LR+ Sbjct: 495 LKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKM 554 Query: 489 GVHILQGYLYAQPMPLRDFPKWLA 512 G + QGY +++PM L Sbjct: 555 GCDMAQGYYFSRPMSADGMADMLR 578 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 96/331 (29%), Positives = 152/331 (45%), Gaps = 9/331 (2%) Query: 192 DKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLA--- 248 D LL L + V S ++ G + + A Sbjct: 368 DDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQE 427 Query: 249 -VLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWN 307 + M + L L + EF L+ QP ++ S + G E L+RW Sbjct: 428 GGGVFSFYAPEMNQRAMETMEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWL 487 Query: 308 NPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QF-HVGINVAPSHFR 365 +PR+G ++P FIP+AEE LIVP+ +V+ E RQ + +V +N++ FR Sbjct: 488 HPRRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFR 547 Query: 366 RGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTG 422 G L + + + L LE+TE + D + EL V+L++DDFGTG Sbjct: 548 TGDLPGLVREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTG 607 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 SSF+ L + LKID+SF I +D ++T+ IIA+ R+ ++ +AEGVET+ Q Sbjct: 608 YSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQL 667 Query: 483 KYLRRHGVHILQGYLYAQPMPLRDFPKWLAG 513 YLR+ G +QGYL ++P+P ++ + Sbjct: 668 AYLRKQGCDEIQGYLLSRPLPASEYAALVRR 698 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 142/261 (54%), Gaps = 5/261 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 L T + ++ L++ + EL+ QP L+ +S +G E LLRWN+P +G +SP Sbjct: 818 MNLKTHELLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLE 877 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQY 376 FIP+AEE LIV + +++ RQ + Q V +N++ F L+ + + Sbjct: 878 FIPLAEETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKV 937 Query: 377 WF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + P + L LEITE + D+ I L + V+LAIDDFGTG SS S+L+ Sbjct: 938 LEQTGVPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFP 997 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 LKIDKSF + +DA ++ + + +AL ++++ +VAEG+E QEQ YL++ G Sbjct: 998 ICSLKIDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFG 1057 Query: 494 QGYLYAQPMPLRDFPKWLAGS 514 QGYL ++P+P+ ++ Sbjct: 1058 QGYLISRPLPVAQCTQFCRER 1078 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 89/353 (25%), Positives = 160/353 (45%), Gaps = 16/353 (4%) Query: 175 MLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGAT 234 + ++ ++ ++++ +P + +V F+I ++ Sbjct: 194 AVRLDGDKFALVMAIADTDDSVIVAEKALNAVKEPFALDGQEVVVT---FSIGISVYPLD 250 Query: 235 ALAWHYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLGLAQHEFELFC 286 A + L A+ + R+ + LA EF +F Sbjct: 251 ADSSAQLVKHAENALHYAKVSGRNQYQFFSKDMNRKAKSRLELEGRMRRALANQEFVVFY 310 Query: 287 QPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHV 346 QP ++A +G E L+RW +P +G + P FIP+AEE I P+ +V+ ++ Q + Sbjct: 311 QPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQIEPIGTWVLRQSCIQNRL 370 Query: 347 FPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYRI 403 + + V +NV+ FR L++ + + + + L LEITE + DVD + Sbjct: 371 WQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLELEITESMLMNDVDTAV 430 Query: 404 --ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIII 461 + L + L+IDDFGTG SS S+L LKID++F A + ++ + + II Sbjct: 431 RKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADVDTNPKTAEIARAII 490 Query: 462 ALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 L + LN+E+VAEG E E +LR +G +QG+ Y++P+P +F + + Sbjct: 491 GLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADEFERMMGQR 543 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 7/267 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + R R++ + ++F+L Q +++ S Q +G E L+RW +P +G Sbjct: 512 FFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVSS-SGQTLGAEALIRWQHPERGQ 570 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS---QFHVGINVAPSHFRRGVLI 370 +SP FIP+AEE LI+P+ ++V+ Q + + + +N++ + + Sbjct: 571 VSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFV 630 Query: 371 KDLNQYWFSA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 + + +L LE+TE + ++ I L + + ++DDFGTG SS Sbjct: 631 EQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQ 690 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ L + +KID+SF + +DA + + II + L+I ++AEGVET E+ +YL Sbjct: 691 YLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLD 750 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGS 514 +G QGYL+++P+P+ +F L Sbjct: 751 NGCTHYQGYLFSKPVPINEFEVLLKKG 777 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 91/306 (29%), Positives = 142/306 (46%), Gaps = 9/306 (2%) Query: 218 SSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLS----LLVGYIAWLATAYRMSFSREI 273 +S +I + + T + A A R++ R++ Sbjct: 518 TSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNYQFFAADMNRTAAERLNIERKL 577 Query: 274 NLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLT 333 +A++E L QP A GVE LLRW++P G ISP FIP+AEE +IV + Sbjct: 578 RHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIG 637 Query: 334 RYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQQLILEI 390 +V+A + + + + +NV+ RR + + + P + L LEI Sbjct: 638 DWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAELLELEI 697 Query: 391 TERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIG 448 TE + + I L R V LAIDDFGTG SS ++L+ D LKID+SF A I Sbjct: 698 TESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIE 757 Query: 449 SDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFP 508 D + + IAL L + ++AEGVET++Q + LR +G +QG+L+++P+ Sbjct: 758 HDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPLTGAAAF 817 Query: 509 KWLAGS 514 +L Sbjct: 818 AFLHAR 823 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 9/324 (2%) Query: 205 SLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIA----W 260 + P E +I N + + + A L + Sbjct: 1024 AQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTEDLS 1083 Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 A+ + + + ++ ++ QP ++ + IG E L+RW +P +G + P FI Sbjct: 1084 RASNEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFI 1143 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYW- 377 P+AEE LI + +V+ ET Q + + + +N++P F RG + +++ Sbjct: 1144 PLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLA 1203 Query: 378 FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + P +L LE+TE + + I L ++++LAIDDFGTG SS S+L+ D Sbjct: 1204 ETGFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLD 1263 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +LKIDKSF I + + IIA+G L +++AEGVET+EQ ++L+ G + QG Sbjct: 1264 ILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQG 1323 Query: 496 YLYAQPMPLRDFPKWLAGSQPPPA 519 YL + P+P +F K L + A Sbjct: 1324 YLTSPPIPAEEFEKLLKENMARDA 1347 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 10/307 (3%) Query: 219 SQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSL-----LVGYIAWLATAYRMSFSREI 273 S R ++ + L A + ++ E+ Sbjct: 833 SARMGISVYPIDGNDATTLMKHADAALADAKQCGVRNSFRFYSSSMNEHAHKLLTMGAEL 892 Query: 274 NLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLT 333 ++Q+ L QP ++ + Q IG E L+R N+P +G ISP FI +AEE LI+P+ Sbjct: 893 RNAISQNRLVLHYQPQVDIITGQIIGAEALIRINHPERGIISPGEFISVAEETGLIIPMG 952 Query: 334 RYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEI 390 +V+ E RQ + + + + IN++P + L + ++ S + L LE Sbjct: 953 TWVIREACRQMQQWHLDKNIELTIAINLSPLQLHQSDLPEIVSLALHDSGLNARYLELEF 1012 Query: 391 TERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIG 448 TE + +V I + + L+IDDFGTG SS S+L+ D LKID+SF + I Sbjct: 1013 TESAIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQSFVSNIT 1072 Query: 449 SDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFP 508 D ++ + IIALG+ L + +AEGVET+ Q YLR +QGYLY+ P+P +F Sbjct: 1073 QDPNDAAIVQAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLYSAPLPAEEFA 1132 Query: 509 KWLAGSQ 515 L + Sbjct: 1133 ALLVRGK 1139 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 138/265 (52%), Gaps = 5/265 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + T R ++ L + EF L QP + + + +G+E LLRWN+ +G Sbjct: 752 MYSSEINTLTMERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGI 811 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFH--VGINVAPSHFRRGVLIK 371 +SP FIP+AEE LI+P+ +V+ E RQ + V +N++ + ++ Sbjct: 812 VSPMEFIPLAEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQ 871 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + P Q L LEITE A+ ++D + +EL +K+AIDDFGTG SS + Sbjct: 872 AVKSILEDTQLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAM 931 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L +KIDKSF + D + + IIA+ L + + AEGVET++Q L + Sbjct: 932 LKQLPISNIKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQE 991 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAG 513 + LQGYLY++P+P + +++ Sbjct: 992 KCNYLQGYLYSKPLPAEECLRFVQE 1016 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 5/266 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + +++ ++ L + EF L+ QP + + + +G+E L+RW +P G+ Sbjct: 595 VFAEEMHREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGF 654 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 + PD FIP+AEE LI P+ ++V+ Q + + +N++ F + LI Sbjct: 655 VPPDQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLIN 714 Query: 372 DLNQYWFSA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + Q + Q L LEITE A+ DV++ I +EL + + IDDFGTG SS + Sbjct: 715 IILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNV 774 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ + LKID+SF I ++ ++ + I+AL Q L +++VAEGVET +Q +LR Sbjct: 775 LKHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSI 834 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGS 514 + QGY + P+P + K L S Sbjct: 835 HCDLAQGYYFCPPVPAIEIAKLLRQS 860 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 84/282 (29%), Positives = 138/282 (48%), Gaps = 13/282 (4%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + + + + L + +F L QP ++ + +G E LLRW +P G Sbjct: 729 FFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPEFGP 788 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP F+PIAE + LI + +V+ E + Q + + +N++ + FR L + Sbjct: 789 VSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRNPNLPE 848 Query: 372 DLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 ++Q P Q+ LE+TE A+ D + L + ++++IDDFGTG SS + Sbjct: 849 LVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSSLGY 908 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ + LKID+SF IG D + + II L L + VAEGVET +Q +LR+ Sbjct: 909 LKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQ 968 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMP 530 G +QGY +++P+P F +L +G +TP P Sbjct: 969 GCDTVQGYYFSRPLPAEAFVGYLQ--------ESGALTPSPP 1002 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 139/266 (52%), Gaps = 6/266 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + + + L + EFEL QP ++ + +GVE LLRW +P QG ISP F+P Sbjct: 827 RVSEYLHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVP 886 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 IAEE LIVP+ +V+ E RQ ++ + + +N++ F R +I+ +++ Sbjct: 887 IAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSR-SVIEAIDEALAD 945 Query: 379 SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S + L +E+TE + D + L + + +A+DDFGTG SS ++L+ D Sbjct: 946 SGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDK 1005 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF I D N + D II + L I+++AEGVET+ Q YLR+ G +QGY Sbjct: 1006 LKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGY 1065 Query: 497 LYAQPMPLRDFPKWLAGSQPPPARHN 522 L ++P P +W+ R Sbjct: 1066 LVSRPQPAAALGQWMLERGMQHGRER 1091 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 93/277 (33%), Positives = 148/277 (53%), Gaps = 10/277 (3%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 A +R + E+ + + +F L Q ++ +S + G E LLRW +P +G I P Sbjct: 559 MQAAVTHRAALETELRKAIDEQQFHLCFQVQMD-QSGRPTGGEALLRWEHPTRGTIPPAS 617 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS---QFHVGINVAPSHFRRGVLIKDLNQ 375 FIP+AEE LIVP+ ++V+A RQ + + +NV+ FR+ L Sbjct: 618 FIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLRD 677 Query: 376 YW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETL 432 + P +L LE+TE L D + I EL + ++ ++DDFGTG SS ++L+ L Sbjct: 678 LLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRL 737 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 + LKID+SF + +D ++ + + I+ALG L +E++AEGVET Q ++L G Sbjct: 738 PLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKN 797 Query: 493 LQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIM 529 QGYL+ +P+PL +F ++L G A NG + I Sbjct: 798 YQGYLFGRPLPLLEFEQFLQGC---DAGANGALVDIP 831 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 90/268 (33%), Positives = 137/268 (51%), Gaps = 5/268 (1%) Query: 255 VGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 + + + +AQ + + QP ++ S IG E LLRW++P G I Sbjct: 592 FTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNI 651 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKD 372 SP FIPIAEE LI+ + +V+ + Q + + + +N++ FR L Sbjct: 652 SPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNL 711 Query: 373 LNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWL 429 + Q P Q L LE+TE A+ D I LH + V+++IDDFGTG SS S+L Sbjct: 712 VMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYL 771 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + + LKID+SF I +DA + + II + + L ++ +AEGVET EQ +LR G Sbjct: 772 KQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEG 831 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGSQPP 517 H QGY Y++P+P DF ++ G+ Sbjct: 832 CHEAQGYHYSKPLPAADFETFILGASAA 859 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 98/354 (27%), Positives = 171/354 (48%), Gaps = 24/354 (6%) Query: 183 QISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPF-----------TINVNGP 231 + + ++ Q + V + R PF +I ++ Sbjct: 509 REGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLY 568 Query: 232 GATALAWHYLPTQLPLAVLLSLLVGYI--------AWLATAYRMSFSREINLGLAQHEFE 283 L A+ L+ G R+ +++ L +F+ Sbjct: 569 PEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQALELGQFQ 628 Query: 284 LFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ 343 + QP ++ RS + GVE L+RW +P +G + P FIP+AE+ LI PL +V+ R+ Sbjct: 629 VHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAARE 688 Query: 344 RHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVD 400 + ++ +N++P FR L + + S ++L LEITER ++D++ Sbjct: 689 VRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLE 748 Query: 401 YRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTD 458 + + + R V+++IDDFGTG+SS ++L+ L LKID+ F IG D+ ++ + + Sbjct: 749 HTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAE 808 Query: 459 IIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512 +IALG+ L ++++AEGVET+EQA +LR HG +QG+ A+PMP + WL+ Sbjct: 809 AVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTGWLS 862 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 85/255 (33%), Positives = 136/255 (53%), Gaps = 5/255 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 S +++ L L + E L QP + S GVE L+RW++P +G +SP FIP+AEE Sbjct: 667 FSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEET 726 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 IV + +V+ Q + + + +N++ R+ L + + + Sbjct: 727 GQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDA 786 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LEITE + D E+ V+L+IDDFGTG SS ++L+ + + LKID+ Sbjct: 787 RHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQ 846 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF I +D ++ + II+LG RLN+ ++AEGVETQEQ +LR G +QGY Y++P Sbjct: 847 SFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRP 906 Query: 502 MPLRDFPKWLAGSQP 516 + DF +++ Sbjct: 907 LLAEDFMRFVKAPPR 921 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 89/369 (24%), Positives = 154/369 (41%), Gaps = 22/369 (5%) Query: 169 IDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPF---- 224 I + + L D+ ++ N + Q +S +P Sbjct: 288 IQRVAERIKGSIPSSACLYRLGGDEFVVVLENTNEIEELESIAQSIMQNASNTYPVAKME 347 Query: 225 -----TINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWL--------ATAYRMSFSR 271 +I + A L A+ + G+ + ++ Sbjct: 348 MMITASIGIASYPQHADDVDNLLKNADAAMYRAKSTGHNMYCVYEDHMADNINAHLTLGG 407 Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 + + + +F L QP + + +G E L+RW +P G ISPD FIP+AEE LI+P Sbjct: 408 GLRKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWVHPELGMISPDQFIPLAEESGLILP 467 Query: 332 LTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLIL 388 L +V+ RQ + + + +N++ F + L+ + + + + L L Sbjct: 468 LGEWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFMQADLVDMVQRALEETGVDPEYLEL 527 Query: 389 EITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAA 446 E+TE + D I + + L+IDDFGTG SS ++L+ LKID+SF Sbjct: 528 ELTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTLKIDRSFIHD 587 Query: 447 IGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRD 506 +G D N + IA+ LN++++AEGVE + Q L + +QGYL+++P+ D Sbjct: 588 LGLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYLFSKPLSSDD 647 Query: 507 FPKWLAGSQ 515 F +L Sbjct: 648 FLMYLKAHS 656 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 94/365 (25%), Positives = 167/365 (45%), Gaps = 25/365 (6%) Query: 159 SNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS 218 G++ + D +L + + ++ + G++ ++ +P + + + + Sbjct: 276 GEQGIVARMEGDEFALLLQDIESE----------EQLMELSRGMLHAIDEPFELKGFPLH 325 Query: 219 SQRFPFTINVNGPGATALAWHYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFS 270 ++ + L + +A++ +L ++ R++ Sbjct: 326 ITG---SLGAVTSLVKEDDGYSLLKKADIALVKVKESGKNDCMLYSESWSNSSFERLTLQ 382 Query: 271 REINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIV 330 E+ + + EF L QP + S +GVE L+RW +P +G I P FIPIAEE +IV Sbjct: 383 HEMYRAIQRKEFILLYQPQYDLVSGMMVGVEALVRWRHPAKGMIPPGEFIPIAEESGMIV 442 Query: 331 PLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLI 387 + +V+ E RQ + + V +N++ F + L + + + L Sbjct: 443 QIGDWVLEEACRQNKAWQDAGLPPMPVSVNLSIRQFVQQDLASKVASVLEKTGLKPEYLD 502 Query: 388 LEITERDALLDVD-YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAA 446 LEITE + R EL V +++DDFGTG SSF +L+ D LKID+SF Sbjct: 503 LEITESMTMDTGHVSRCLLELTDMGVGISVDDFGTGYSSFHYLKNFPIDRLKIDRSFVRD 562 Query: 447 IGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRD 506 I D ++ + IIA+ LNI+++AEGVE EQ ++LR+H +QGY ++ P+ D Sbjct: 563 IQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRKHNCDEMQGYFWSPPVSSTD 622 Query: 507 FPKWL 511 + L Sbjct: 623 IEQML 627 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 93/279 (33%), Positives = 144/279 (51%), Gaps = 6/279 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R+ R + L + EFEL QP++ A + + +E+LLRW +P G Sbjct: 807 FFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGL 866 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIK 371 +SP FIP+AEE LI P+ +V+ + RQ + + IN++ F + LI Sbjct: 867 VSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIM 926 Query: 372 DLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + +L LE+TE + + + EL V+L+IDDFGTG SS S+ Sbjct: 927 QVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSY 986 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ D LKID+SF + D N+ + + I+A+ ++L+ +VAEGVET+ QA +L Sbjct: 987 LKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAK 1046 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPP-ARHNGHIT 526 G +LQGYL+++P+P + P +L P P R G I Sbjct: 1047 GCQLLQGYLFSRPLPAAELPAFLQQRSPQPLTRERGAIV 1085 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 92/348 (26%), Positives = 155/348 (44%), Gaps = 15/348 (4%) Query: 174 AMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGA 233 ++ + A+ T+ ++ L V N + ++S + Sbjct: 546 EFMILSTDIRDERAAATLAQKLLRQFRQKV------AINGHEIIASASIGIAMFPKDGDN 599 Query: 234 TALAWHYLPTQL----PLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPL 289 + T + + R+ + + + H+ L+ QP Sbjct: 600 GDELFRNADTAMYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPK 659 Query: 290 LNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPM 349 L+ S E L+RW +P+ G ISP FIPIAEE LI+P+ +V+ E RQ + Sbjct: 660 LDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRD 719 Query: 350 SS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQQLILEITERDALLDVDYRI--A 404 V IN++ G L + Q S Q L +E+TE + +D + Sbjct: 720 QENQDIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCEL 779 Query: 405 RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALG 464 + L +++A+DDFGTG SS ++L+ D+LKID+SF + I D + + II L Sbjct: 780 QSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLA 839 Query: 465 QRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512 LN+ +VAEGVET+ Q ++LR +G +QGY + +P+P + ++L Sbjct: 840 HNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 94/268 (35%), Positives = 143/268 (53%), Gaps = 5/268 (1%) Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 L ++S + E+ L + EF L QP ++ R+ + + E L+RWN+ +G Sbjct: 488 ALFTSAMTAIVRKKLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEG 547 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLI 370 + P FI +AEE LIVP+ +V+ RQ + + +NV+ F+ LI Sbjct: 548 LVYPGDFIALAEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLI 607 Query: 371 KDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 + + S L LEITE + D+ I +EL VKLA+DDFGTG SS S Sbjct: 608 ETVATALSESGLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLS 667 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 L+ LKID+SF A I DA + +T II+L Q+L +E++AEGVET+EQA++L Sbjct: 668 ALKRFPLSRLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVE 727 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGSQ 515 G + +QGYL+++P+ F + L + Sbjct: 728 SGCNEIQGYLFSRPVEEAQFNRMLENNS 755 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 93/271 (34%), Positives = 142/271 (52%), Gaps = 5/271 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 +T R+ ++ LA+ EF+L QP ++ G+E LLRW + G Sbjct: 567 FFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGP 626 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIK 371 +SP FIPIAEE +LI + +V+ + RQ + V +N++ +G ++ Sbjct: 627 VSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVA 686 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + S P L LEITE A+ + I + L V++AIDDFGTG SS S+ Sbjct: 687 TVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSY 746 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L DVLKID+SF + D ++ + II++GQ LN++ VAEGVE +E ++L H Sbjct: 747 LKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDH 806 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPA 519 G QGYL+++P+P + L SQ A Sbjct: 807 GCQYGQGYLFSRPVPAATMEQLLLESQALSA 837 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 134/259 (51%), Gaps = 5/259 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 A R+ + L +E L+ QP ++ S + IG E L+RW +P G ISP FI Sbjct: 837 RAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALVRWQDPAHGLISPAQFI 896 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW- 377 P+AEE LI L +V+ E RQ + ++ +N++P FR +++ + Sbjct: 897 PVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRNSNILESVFNALK 956 Query: 378 FSAHPIQQLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + +P L LE+TE + + I L + ++LAIDDFGTG SS ++L+ D Sbjct: 957 QTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLD 1016 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 VLKIDKSF I + + I+A+ L ++++AEGVET+EQ +L+ G QG Sbjct: 1017 VLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQG 1076 Query: 496 YLYAQPMPLRDFPKWLAGS 514 YL + P+P F + L Sbjct: 1077 YLMSPPVPADQFEQLLRAQ 1095 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 94/272 (34%), Positives = 147/272 (54%), Gaps = 7/272 (2%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 +AT RM ++ L + + EF L QP L+ RS +GVE L+RW +P +G +SP Sbjct: 638 MNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPAD 697 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FIPIAEE +I + +V+ E RQ V+ + IN++ F L +++ Sbjct: 698 FIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHEL 757 Query: 377 WFSA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + +L LE+TE ++ D I + L + L+IDDFGTG SS ++L+ L Sbjct: 758 LAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLP 817 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 LKID+SF I SD ++ + D+ + L +L +E+VAEGVET+ Q K+L G + Sbjct: 818 IHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKV 877 Query: 494 QGYLYAQPMPLRDFPKWLAGSQPPPARHNGHI 525 QGYL ++P+P +++ + PP + G I Sbjct: 878 QGYLISKPLPADQAERFIRNN--PPMKGLGTI 907 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 137/258 (53%), Gaps = 5/258 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R + ++ LA+ +FE++ Q ++ + + IG E L+RW +P G +SP FIP+ Sbjct: 722 AVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPL 781 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS-QF-HVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LI+P+ +V+ ++ Q + V +NV+ +R + + Sbjct: 782 AEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVET 841 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 L LEITE + + +Y I + V+LAIDDFGTG SS S L+ L D + Sbjct: 842 DCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKI 901 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +++ ++ + I A+ Q L ++AEGVET++QA +L++ G QGYL Sbjct: 902 KIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYL 961 Query: 498 YAQPMPLRDFPKWLAGSQ 515 Y++P+ +F L Q Sbjct: 962 YSRPVTASEFTALLRAEQ 979 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 139/267 (52%), Gaps = 6/267 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 RM R + + +++F+L QP + S + +GVE LLRW +P G Sbjct: 373 FFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGP 432 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ---FHVGINVAPSHFRRGVLI 370 ISP VFI + E +LI+P+ +V+ E +Q + + +N A F + L+ Sbjct: 433 ISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQFAQADLV 492 Query: 371 KDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 + + + S + L LEITE A+ D++ I + L V +AIDDFGTG SS + Sbjct: 493 ETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSLA 552 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ D+LKIDKSF I ++ + I + L +E++AEGVET+ Q ++LR Sbjct: 553 YLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRG 612 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGS 514 HG ++QGYL+++P+P + L Sbjct: 613 HGCDMIQGYLFSRPVPPEQIAEILQKG 639 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 89/273 (32%), Positives = 139/273 (50%), Gaps = 5/273 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 RM + + ++EFEL QP ++ + + IG+E L+RWN+P G Sbjct: 586 FFTEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGM 645 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 + P+ FI +AEE +L++PL +V+ E RQ + + +N++ + L Sbjct: 646 VHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFT 705 Query: 372 DLNQYWFSA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 ++ + L LEITE + D + I +EL K V LAIDDFGTG SS S+ Sbjct: 706 LIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSY 765 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L LKID+SF I +D ++ + IAL + L + LVAEGVET+ Q +YLR Sbjct: 766 LKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQ 825 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARH 521 G QGY +++P+P + +++ Q Sbjct: 826 GCDSAQGYYFSKPLPANNIMAFVSRHQQEVMSS 858 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 96/281 (34%), Positives = 155/281 (55%), Gaps = 7/281 (2%) Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 ++ + R++ R++ GL + EF+++ QP+L+ R+++ + VE L+RW++P +G Sbjct: 480 VVFDPAMYAQAVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVEALVRWHHPERG 539 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF----PMSSQFHVGINVAPSHFRRGV 368 ISP FIPIAEE LIVPL +V+AE RQ + P + V +N++ FR Sbjct: 540 LISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFRHPS 599 Query: 369 LIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSS 425 L D+ Q + P L LEITE + D + R+L + V+LA+DDFGTG SS Sbjct: 600 LTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTGYSS 659 Query: 426 FSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYL 485 S+L+ D +KID+SF + + + + +IA L +++ EGVET+EQ ++L Sbjct: 660 LSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQLEFL 719 Query: 486 RRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHIT 526 R G ++QG+L+A PMP + ++L H + Sbjct: 720 ERVGCDLVQGFLFAPPMPPDEVARFLHTGLQTSGFHPPALL 760 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 91/255 (35%), Positives = 135/255 (52%), Gaps = 6/255 (2%) Query: 258 IAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPD 317 A+A R++ E+ + + E LF QP+++ E L+RW +P QG ++PD Sbjct: 316 AMNAASAERLTLEAELRHAVERGELRLFYQPIVD-PDGTVRAAEALVRWQHPEQGLLAPD 374 Query: 318 VFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQ 375 FIP+A+E LI + +V+ E Q + + F V +NV+ F + L++ + + Sbjct: 375 RFIPLADETGLITEIGAWVLTEACYQGRCWHDAGHERFRVSVNVSAVQFGQPRLLETVRE 434 Query: 376 YWF-SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETL 432 S P L LEITE + DV+ + R L V++A+DDFGTG SS S+L L Sbjct: 435 ALRGSGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSSLSYLRRL 494 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D +KIDKSF + ++ ++ + IIAL L + VAEGVET EQ LRR G Sbjct: 495 PIDTVKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATLRREGCDS 554 Query: 493 LQGYLYAQPMPLRDF 507 QGY Y +P+P F Sbjct: 555 FQGYRYGRPVPAEVF 569 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 10/277 (3%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 L + R++ + L + EF L Q +++ + GVE L+RW++P G Sbjct: 602 LYTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGL 661 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP FIP+AE +I + +V+ RQ + + +NV+ F + + Sbjct: 662 VSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPE 721 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSW 428 + + + P Q L LE+TE + VD + + L V+++IDDFGTG SS S+ Sbjct: 722 VVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSY 781 Query: 429 LETLRPDVLKIDKSFTAAIGSD-----AVNSTVTDIIIALGQRLNIELVAEGVETQEQAK 483 L+ + D LK+D+SF I + + II L L ++ +AEGVET EQA+ Sbjct: 782 LKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAE 841 Query: 484 YLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPAR 520 +LR G +QGYL ++P+ D + P + Sbjct: 842 FLRSKGCDEVQGYLISRPVSGEDLISLFDRNLLPQGK 878 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 84/266 (31%), Positives = 141/266 (53%), Gaps = 7/266 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 A + R +++L L Q +F L QP ++A+ ++ VE LLRW +P G Sbjct: 1132 FFTASMNEAASDRRQLEEDLHLALQQKQFVLHYQPQVDAQ-RRVFAVEALLRWQHPHHGL 1190 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLI 370 + P F+P+AE+ LIVP+ ++V+ Q + + + V +NV+ FR+ + Sbjct: 1191 VPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQPDFV 1250 Query: 371 KDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 + L Q S +L LE+TE L +V I + V ++DDFGTG SS S Sbjct: 1251 ELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLS 1310 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L L D LKID++F + + ++ + I+ +G+ L +++VAEGVET+ Q ++L Sbjct: 1311 YLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDS 1370 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAG 513 HG QG+L+++P+ + F +L G Sbjct: 1371 HGCDGYQGFLFSRPLAVDAFEDFLQG 1396 >UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 Length = 530 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 136/518 (26%), Positives = 227/518 (43%), Gaps = 17/518 (3%) Query: 12 RRNRMIVCTICALV--TLASTLSVRFISQRNLNQQRVVQ---FANHAVEELDKVLLPLQA 66 +R+ ++ T +V +A L+ + S + +Q FA +A+E D + Sbjct: 2 KRHHWLIATFACIVFAIIAPALAAVYTSSVVAAHREQIQLTLFATYAIERTDTTFSGVSQ 61 Query: 67 GSEVLLPLIGLPCSVAH-LPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILA 125 L PCS H L++ A + + + IG DG L C+S G + V Sbjct: 62 ALMQTQMLTDKPCSKEHMDDLKRIAIETRPITEIGYFDDGLLKCTSW-GMAGMRVAAGTP 120 Query: 126 ELPAPQPLLRLTIDRALIKGSPVLIQWTPAA----GSSNAGVMEMINIDLLTAMLLEPQL 181 + + A I + ++ A V E++ + + Sbjct: 121 AFTTRNGVKVVLNMTASIPTTANMLGLQRGAYCILIDPKWFVDEIVPKG--VQIAVASPD 178 Query: 182 PQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYL 241 + +A D + D+ P S I T++ L Sbjct: 179 GTVVAALNHPDPAVIRQFLKPSDTKPPSRYLGAVVRGSDWTAIAITPRASIWTSMQ-EEL 237 Query: 242 PTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 LP+A ++S + + + R+S E+ + + + EF + QPL+ ++ C+G E Sbjct: 238 LVFLPIAGVISTGMVILTIWLSRRRLSLRGELAIAIRRREFTVVYQPLIELKTGICVGAE 297 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRH-VFPMSSQFHVGINVA 360 L+RW P + PD+FIPIAE +I +T V+A T+R V HV IN+A Sbjct: 298 ALVRWRRPDGAMVMPDLFIPIAENSKMISQITEQVVANTVRDLGDVLAADEALHVAINMA 357 Query: 361 PSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALL-DVDYRIARELHRKNVKLAIDD 418 +G ++ + + + +Q+ LE TER + I + +AIDD Sbjct: 358 DDDLAQGRILTVVQRAIRGTGIRTEQIWLEATERGFMDPKSTRTIIEKARELGHSIAIDD 417 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG SS +L+ L D LKIDKSF + +G+D+ S + IIA+ + L++ +VAEG+E Sbjct: 418 FGTGYSSLHYLQELPVDTLKIDKSFISTLGTDSATSPIAAHIIAMAKSLDLIIVAEGIER 477 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQP 516 QEQA YL HGV QG+LY+ P+P ++F ++ + Sbjct: 478 QEQADYLIAHGVQFGQGWLYSPPLPAQEFIEFYKAQKA 515 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 136/260 (52%), Gaps = 7/260 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R ++ LA+ +F L QP ++ R GVE L+RW +P++G +SP FIP+ Sbjct: 1239 VTARAELENDLRTALAREQFMLHYQPQID-RRGSVTGVEALVRWPHPQRGMVSPGEFIPL 1297 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPM---SSQFHVGINVAPSHFRRGVLIKDL-NQYWF 378 AEE L++PL R+V+ Q + + +NV+ F ++D+ Sbjct: 1298 AEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAITA 1357 Query: 379 SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + P +L LE+TE + D++ I L V ++DDFGTG SS S+L+ + D Sbjct: 1358 TGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQ 1417 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF + +D ++ + D IIAL + L ++++AEGVET EQ L + G QGY Sbjct: 1418 LKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGY 1477 Query: 497 LYAQPMPLRDFPKWLAGSQP 516 +++P+P +L P Sbjct: 1478 FFSRPLPETALEDFLVQKLP 1497 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 141/261 (54%), Gaps = 7/261 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R++ E++ L + +F L Q ++ S + +G E L+RW +P +G + PD FI Sbjct: 554 AVTARVALEGELHKALDRQQFRLHYQIQVD-ASGRPLGAEALIRWMHPERGLVPPDQFIG 612 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ---FHVGINVAPSHFRRGVLIKDLNQ-YW 377 +AEE LI+P+ ++VM Q + + + +NV+ + F + + + Sbjct: 613 MAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQ 672 Query: 378 FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A + L LE+TE L +++ I L V+ ++DDFGTG SS +L+ L D Sbjct: 673 RHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLD 732 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 +KID+SF I SD+ + + IIA+ Q L ++++AEGVET+EQ ++L+ +G QG Sbjct: 733 QIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQG 792 Query: 496 YLYAQPMPLRDFPKWLAGSQP 516 YL+ +P+P+ F L + Sbjct: 793 YLFGKPVPVEQFEAMLQPDRA 813 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 90/265 (33%), Positives = 137/265 (51%), Gaps = 5/265 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 LA R++ + L + EF L QP + + IG+E L+RW++P +G Sbjct: 381 FYTSALTLAANDRLALETSLRHALEREEFTLHYQPRVRTQDDVMIGMEALVRWHHPDKGL 440 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIK 371 +PD FIP+AEE LI PL +V+ RQ + H+ +N++ R+ L+ Sbjct: 441 TAPDAFIPMAEETGLITPLGLWVLRTACRQAQTWMRLYGEPIHMAVNLSMRQLRQPDLVS 500 Query: 372 DLNQYWF-SAHPIQQLILEITERDAL--LDVDYRIARELHRKNVKLAIDDFGTGNSSFSW 428 ++ + P L LE+TE + EL V+LAIDDFGTG SS ++ Sbjct: 501 QIDAILRDTGLPASSLELELTESVLMAGDGHTLTALAELKALGVRLAIDDFGTGYSSLAY 560 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L D LKID+SF + I DA + + IIA+ + L +E+VAEGVET EQ +L++ Sbjct: 561 LKRLPIDALKIDRSFVSDIPHDASDMAIASTIIAMARTLGLEVVAEGVETPEQLAFLKKE 620 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAG 513 G QG+ ++ P+ + WL G Sbjct: 621 GCDSYQGFGFSPPVDAQAMTLWLDG 645 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 86/338 (25%), Positives = 152/338 (44%), Gaps = 16/338 (4%) Query: 199 GNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLS------ 252 ++DS P ++ +I + + L +A+ + Sbjct: 552 AQKILDSFALPFHIHKNELHIDG---SIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRN 608 Query: 253 --LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPR 310 + R ++ L ++E L+ QP+++ S GVE LLRW +P Sbjct: 609 NYQFFTDELNKSAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPE 668 Query: 311 QGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGV 368 Q I+PD FI +AEE LI+P+ +V+ Q + V IN++ FR Sbjct: 669 QKLITPDKFINLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKD 728 Query: 369 LIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSS 425 LIK++++ + + + LEITE + +++ + L + ++IDDFGTG SS Sbjct: 729 LIKNISRILSETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSS 788 Query: 426 FSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYL 485 S+L+ LKID+SF + +D + T+ IIA+ L +E++AEG+E +EQ +L Sbjct: 789 LSYLKQFPIHTLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFL 848 Query: 486 RRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNG 523 + QGY +++P+ + + L S + Sbjct: 849 VTQKCNHYQGYYFSKPVTVSEIELMLMNSVTQSNKIRA 886 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 90/251 (35%), Positives = 134/251 (53%), Gaps = 5/251 (1%) Query: 270 SREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLI 329 +I GL + EF LF QP ++A +GVE L+RW +P+QG +SP FIP+AEE LI Sbjct: 715 EGDIRKGLERGEFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLI 774 Query: 330 VPLTRYVMAETIRQRHVFPMSSQF--HVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQL 386 VP+ +V+ RQ + S V +NV+ + + + +L Sbjct: 775 VPIGEWVLTAACRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRL 834 Query: 387 ILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFT 444 LE+TE + RI L V +IDDFGTG SS S+++ LKID+SF Sbjct: 835 ELELTESILMDPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFV 894 Query: 445 AAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPL 504 + DA ++ +T II++ + LN+E+VAEGVET+EQ +L+R LQGYL++ P+P Sbjct: 895 HGLPQDADDAGITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPP 954 Query: 505 RDFPKWLAGSQ 515 + L + Sbjct: 955 DEMEAILRRGR 965 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 95/375 (25%), Positives = 160/375 (42%), Gaps = 35/375 (9%) Query: 148 VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLP 207 VL+ + SNAGVM+ I +L+ M Q + ++ +SL Sbjct: 473 VLLLTNQSVSDSNAGVMQRIQAELIKPM---WIRGQEIVVTCSMGVARFPEDGEDSESLL 529 Query: 208 QPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRM 267 D Y+ S + R+ Sbjct: 530 ANADTAMYRAKSSGRN---------------------------NFQFYTKEMNATSGERL 562 Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 S ++ L E L QP ++ R IG+E L+RW +P++G I+P FIP+AE + Sbjct: 563 SLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNG 622 Query: 328 LIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQ 384 LI+P+ +V+ R V IN++ ++ + + Sbjct: 623 LIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPH 682 Query: 385 QLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKS 442 L LE+TE + +V+ + +L++ ++L++DDFGTG SS ++L+ D LKID+S Sbjct: 683 YLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQS 742 Query: 443 FTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 F SD ++ + IIAL L I+++AEGVE E +L+++G QGY ++P+ Sbjct: 743 FIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPL 802 Query: 503 PLRDFPKWLAGSQPP 517 D +L + P Sbjct: 803 TFDDLRMFLLTGKNP 817 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 87/273 (31%), Positives = 145/273 (53%), Gaps = 5/273 (1%) Query: 255 VGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 +L R+ + ++ + EF++F QP ++ ++ Q IG E LLRW++P G I Sbjct: 815 FSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLI 874 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKD 372 P FI +AEE LI + +V+ ET RQ + ++ +N++P G + + Sbjct: 875 PPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQL 934 Query: 373 LNQYWF-SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWL 429 + S P L LE+TE + + I + L ++ +++AIDDFGTG SS ++L Sbjct: 935 IGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYL 994 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 + DVLKIDK F I + + + I+A+G L + ++AEGVET+ Q ++L + G Sbjct: 995 KQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQG 1054 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGSQPPPARHN 522 QGYLY+ P+P +F + L+ PP + + Sbjct: 1055 CDYYQGYLYSMPLPAEEFAQLLSQQNPPVTQAH 1087 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 104/357 (29%), Positives = 163/357 (45%), Gaps = 15/357 (4%) Query: 177 LEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATAL 236 + I L D + + +P E + S P +I ++ Sbjct: 584 RQGGDEFIVLLPLIADPGSAALAAERIREVLEPP-VELFNHSISITP-SIGISVFPDDGR 641 Query: 237 AWHYLPTQLPLAVLLSLLVG------YIAWLATAYR--MSFSREINLGLAQHEFELFCQP 288 + L A+ + G Y A L R + ++ L + EF L QP Sbjct: 642 DFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAREILEIESQLRYALDRDEFVLHYQP 701 Query: 289 LLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP 348 ++ ++ + IG E L+RW +P G + P FI +AEE IV + +V+ E RQ + Sbjct: 702 QVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWR 761 Query: 349 MSSQFHV--GINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI-- 403 + +N++ FR+ L L + L +E+TE + DV+ I Sbjct: 762 RQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHT 821 Query: 404 ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIAL 463 + ++L+IDDFGTG SS S+L+ + D LKID+SF I DA +S + II + Sbjct: 822 IDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINM 881 Query: 464 GQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPAR 520 + LN+ ++AEGVET EQ K+L R G H QGYL A+P+P ++F + L P R Sbjct: 882 AKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEFERLLEKGVLLPER 938 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 99/309 (32%), Positives = 153/309 (49%), Gaps = 13/309 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLSLLVG------YIAWLATAYR--MSFSREINLG 276 +I ++ + L A+ + G Y A L R ++ ++ Sbjct: 628 SIGISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAREILAIESQLRFA 687 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L + EF L QP + S + +G E L+RWN+P G + P FI +AEE IV + +V Sbjct: 688 LERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWV 747 Query: 337 MAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQQLILEITER 393 +AE RQ + + + + IN++ FR+ L + Q S P L +E+TE Sbjct: 748 IAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTES 807 Query: 394 DALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + D I + ++L+IDDFGTG SS S+L+ + D LKID+SF I DA Sbjct: 808 IIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDA 867 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 +S + II + + LN+++VAEGVET EQ ++L + G +QGYL A+P+P DF + L Sbjct: 868 DDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAELL 927 Query: 512 AGSQPPPAR 520 P Sbjct: 928 HKDSLLPQS 936 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 8/261 (3%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 R + + + ++F L Q + + + G E L+RW +P++G + P Sbjct: 768 MQTVVVQRAALEAGLRNAIEDNQFLLHYQAQV-VGT-RVTGAEALVRWQHPQRGIVPPAE 825 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQ 375 FIP+AEE LIV L +V+ Q + P + + +NV+ FR+ + ++ Sbjct: 826 FIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKADFVDNVLT 885 Query: 376 YW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETL 432 + +L LE+TE + +V I L K + A+DDFG G SS S+L+ L Sbjct: 886 IIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLSYLKRL 945 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D LKID+SF + D+ ++ + I+AL + L + ++AEGVET+ Q +L G + Sbjct: 946 PLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAAAGCYA 1005 Query: 493 LQGYLYAQPMPLRDFPKWLAG 513 QGY + +P+P+ DF L Sbjct: 1006 YQGYYFCRPLPIEDFEALLNN 1026 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 84/282 (29%), Positives = 135/282 (47%), Gaps = 12/282 (4%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R++ + L + E L QP L + +G+E L+RWN+P G Sbjct: 597 FFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGL 656 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIK 371 ISP FIPIAE+ LIV + +V+A Q + V +N++ F + Sbjct: 657 ISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVD 716 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSW 428 + + S + LE+TE +VD I L + + ++IDDFGTG SS ++ Sbjct: 717 RVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNY 776 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ DVLKIDKSF + ++ + II + +++++VAEGVET EQ K L Sbjct: 777 LKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEG 836 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMP 530 +QG+ +++P+P +F +++AG P + P P Sbjct: 837 NCEEIQGFYFSRPLPPEEFERYIAGRTVP-------LLPAAP 871 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 135/258 (52%), Gaps = 7/258 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A R ++ GL + +F L QP + + + GVE L+RW +P +G + P FIP Sbjct: 645 AVIKRAKIEADLRQGLIKKQFLLHYQPQI-FSNGRMTGVEALVRWQHPVRGLVPPSDFIP 703 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF 378 +AEE LI+ L +V+ +Q + P + V +NV+ F + + + + Sbjct: 704 LAEETGLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSVQQFHQPEFVDHIQEVIR 763 Query: 379 -SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + ++L LE+TE +V I L + ++DDFGTG SS S+L+ L D Sbjct: 764 VTGANPERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDDFGTGYSSLSYLKQLPLD 823 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + +D ++T+ I+ L Q L + ++AEGVET+ Q +L G H QG Sbjct: 824 QLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVETEAQRNFLETSGCHSCQG 883 Query: 496 YLYAQPMPLRDFPKWLAG 513 Y +++P+P+ +F ++ Sbjct: 884 YFFSRPLPIEEFEEYARR 901 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 96/340 (28%), Positives = 152/340 (44%), Gaps = 15/340 (4%) Query: 183 QISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFT--INVNGPGATALAWHY 240 + ++ + + + + +E+ ++ S P + I V Sbjct: 348 GGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGRDPEM 407 Query: 241 LPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNA 292 L +A+ + G R++ E+ LA E E QP ++ Sbjct: 408 LLKNADIAMYRAKERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDL 467 Query: 293 RSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS- 351 + G E L+RW +P + + P FI +AEE LIVPL V+ RQ + + Sbjct: 468 ATGALTGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGR 527 Query: 352 -QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVD--YRIAREL 407 V +N++ FR+ L++ + + QL LEITE A+ D D L Sbjct: 528 PDLKVAVNLSGHQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGL 587 Query: 408 HRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRL 467 R+ + LAIDDFGTG SS S+L+ D LKID+SF I +D ++ + IIA+ + L Sbjct: 588 RRQGIALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSL 647 Query: 468 NIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDF 507 + L+AEGVET Q ++L G QG+L+ + MP DF Sbjct: 648 RLSLLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 100/349 (28%), Positives = 154/349 (44%), Gaps = 15/349 (4%) Query: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRF--PFTINVNGPGATALAW 238 ++ + + + + +S Q F++ V+ Sbjct: 471 RYGGDEFTIVLGDLSHVDNIPAILHKVRAAFETPLVISGQEVYASFSVGVSVYPHDGDDG 530 Query: 239 HYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLL 290 L A+ S +S ++ L + EF L QP L Sbjct: 531 ATLLKNADTAMYRSKASGRNRYQFYAPEMNARGQELLSLETDLRRALDRGEFRLHYQPQL 590 Query: 291 NARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS 350 + R + GVE LLRW +PR G I+P F+P+ E+ LIVP+ +V+ Q S Sbjct: 591 DLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRES 650 Query: 351 S--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYR--IAR 405 + +NV+ FR L++ + Q P L LEITE A+ DV I Sbjct: 651 GVAPVRISVNVSARQFREDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILA 710 Query: 406 ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQ 465 L V+LAIDDFGTG SS ++L+ D LKID++F DA + + + I+LG Sbjct: 711 ALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGH 770 Query: 466 RLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 +L +E+VAEGVET EQ +LRR ++QG+ +++P+P +LA Sbjct: 771 KLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPADALTPFLARH 819 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 17/335 (5%) Query: 192 DKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLL 251 ++ +++++ Q Y ++ F+I ++ A+ L +A+ Sbjct: 409 AEQAAHVAGKIIEAMEQTIPVNGYVLNVS---FSIGISVFPDDAMDPDTLIRNADIAMYR 465 Query: 252 S--------LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEIL 303 S R++ +++ + + EF L QP S IG E L Sbjct: 466 SKASGRNQFQFFTADMNAHALERLALENDLHRAVERGEFRLMFQPQFE-GSGSIIGAEAL 524 Query: 304 LRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAP 361 LRW +P++G ++P FIP+AEE LIVP+ +V+ +Q + + + V +N++ Sbjct: 525 LRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISA 584 Query: 362 SHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLD--VDYRIARELHRKNVKLAIDD 418 F + L++ + + S L LE+TE + D + EL V++AIDD Sbjct: 585 LQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDD 644 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG SS S+L + LKID+SF + +T II L + LN+ ++AEGVET Sbjct: 645 FGTGYSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVET 704 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAG 513 +QA +L+ QG+ ++QP+ F + L Sbjct: 705 AQQASFLQAQCCDEFQGHFFSQPVSPEKFAELLRA 739 >UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASF8_PELPD Length = 1023 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 10/282 (3%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 R + + + EF L QP + + GVE L+RW P +G I PD Sbjct: 374 MNRKAMERFAIETCMLRAIDAGEFFLCYQPKVEIHDMKLTGVEALVRWQRPGEGVIPPDR 433 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFH--VGINVAPSHFRRGVLIKDLNQY 376 FI +AEE+ +IV L +++ E RQ + + V +N++ R ++ + + Sbjct: 434 FIALAEENGMIVRLGGWILGEACRQNRAWQDAGLPRTVVSVNISARQLRENSFVEQVERI 493 Query: 377 WF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + L LE+TE + + D + L + V +++DDFGTG SS S+L+ L Sbjct: 494 LEETGLEPCYLDLELTESVVMANSDEIVQKLTRLKQLGVGISVDDFGTGYSSLSYLKHLP 553 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D +K+D+SF I D + + + +IA+G L + ++AEGVET EQ ++LR + Sbjct: 554 VDTIKVDRSFVRDIVHDPDDKAIVEAVIAMGHALGLTVIAEGVETLEQLEFLRSQNCNQA 613 Query: 494 QGYLYAQPMPLRDFPKWLAGSQP----PPARHNGHITPIMPL 531 QGY +++P+ ++L+ PPA+ ++P PL Sbjct: 614 QGYYFSKPLDSGHLARFLSKHCQEMSFPPAKAL-PLSPTAPL 654 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 91/267 (34%), Positives = 134/267 (50%), Gaps = 7/267 (2%) Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 R + L + EF L Q +++ S + IG E LLRWNN + G Sbjct: 776 CFFDSSMQEILEKRGQLETALRGALERKEFLLHYQLQMDS-SGRPIGAEALLRWNNAKLG 834 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ---FHVGINVAPSHFRRGVL 369 +SP FIP+AEE LI+P+ +V+ Q + + + +NV+ FR Sbjct: 835 SVSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAAF 894 Query: 370 IKDLNQYWF-SAHPIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSF 426 + + S L LE+TE L D++ I + L VK ++DDFGTG SS Sbjct: 895 VAKVRNVLQQSGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSL 954 Query: 427 SWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 S+L L D LKID+SF I +D ++ + II++ L +E++AEGVET+EQ ++L Sbjct: 955 SYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLD 1014 Query: 487 RHGVHILQGYLYAQPMPLRDFPKWLAG 513 G QGYLYA+PMP+ + LA Sbjct: 1015 LRGCQAYQGYLYAKPMPIEELEIKLAQ 1041 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 98/336 (29%), Positives = 161/336 (47%), Gaps = 15/336 (4%) Query: 192 DKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLL 251 + ++D+L P ++++++ +I ++ + L A+ Sbjct: 756 AEDAAAVARKMLDALATPVVIDDHELAPS---VSIGISLFPSDGTDVDTLLKHADTAMYG 812 Query: 252 S--------LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEIL 303 + R+ + + ++E L QP + A S + G E L Sbjct: 813 AKEVGRNNFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEAL 872 Query: 304 LRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPS 362 +RW +P G + P FIPIAE+ LIVPL +V+ E RQ+ + S VG+N++ Sbjct: 873 VRWQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISAL 932 Query: 363 HFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALL--DVDYRIARELHRKNVKLAIDDF 419 FRR + + Q + +++ LEITE + D R REL + LA+DDF Sbjct: 933 QFRRADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDF 992 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GTG SS ++L+ L LKID+SF + D ++ VT ++L + L +E+VAEGVET Sbjct: 993 GTGYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETV 1052 Query: 480 EQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQ 515 Q +L G H LQGYLY++P+ + F W+ ++ Sbjct: 1053 AQRDFLVARGCHTLQGYLYSRPLDVAAFEAWMQATE 1088 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 137/257 (53%), Gaps = 5/257 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T+ R+ ++ L + +F L QP +N ++Q G+E L+RW +P G +SP FIPI Sbjct: 425 TSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPAKFIPI 484 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LI+ + +V+ + Q ++ V +N++ F++ + + + + Sbjct: 485 AEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTKILAET 544 Query: 380 AHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L LEITE + ++++ I +L V +++DDFGTG SS +L+ + + + Sbjct: 545 NLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQIPFNTI 604 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + + + ++A+G+ N+ ++AEGVETQ Q + LR+ +QG+ Sbjct: 605 KIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEEMQGFK 664 Query: 498 YAQPMPLRDFPKWLAGS 514 +++P+ +L+ Sbjct: 665 FSKPLKPEAAANFLSNH 681 >UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L613_MAGSM Length = 577 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 129/268 (48%), Gaps = 6/268 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 A R + + ++E L+ QP ++ IG E L+RW +P +G Sbjct: 308 FFSSEMTEAARERFELETHLRQAIEKNELVLYYQPQVDLHDGTIIGAEALIRWKHPERGL 367 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 ISP FIP+AEE LIVP+ +VM IRQ ++ VGIN++ F+R L Sbjct: 368 ISPAQFIPVAEETGLIVPIGEWVMRTAIRQIAIWKELGVTPVRVGINLSALQFKRQNLAA 427 Query: 372 DLNQYWFSA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + + LEITE + DV I + + VKL+IDDFGTG SS S Sbjct: 428 LVEELLNEHDIDPSLVDLEITESAIMDDVGRAIEMLKRISALGVKLSIDDFGTGYSSLSQ 487 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L LKID+SF + S + + + IIA+ L ++ EG+ET Q ++ Sbjct: 488 LRQFPFQTLKIDRSFVTDLES-SGDKAIVSAIIAMAHSLEQTVIVEGLETSAQLTIMKEL 546 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQP 516 + +QG+L+++P+P +F L + Sbjct: 547 NCNEMQGFLFSKPLPAEEFTALLREGRR 574 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 84/252 (33%), Positives = 130/252 (51%), Gaps = 5/252 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R++ + L ++EF L Q L+ Q IG E L+RW++ G +SP FIP+AEE Sbjct: 792 RLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEE 851 Query: 326 HHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHP 382 +I+ + +V+ + R + VG+N++ FR L + ++ S Sbjct: 852 TGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLT 911 Query: 383 IQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L LEITE + + + + + + IDDFGTG SS +L+ D LKID Sbjct: 912 PNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKID 971 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF I D+ + +T IIA+ L I +VAEGVETQ Q ++LR G LQGY++++ Sbjct: 972 RSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSR 1031 Query: 501 PMPLRDFPKWLA 512 P+ + DF L Sbjct: 1032 PLVVEDFVGLLR 1043 >UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='Nostoc azollae' 0708 RepID=B9YGE9_ANAAZ Length = 637 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 10/314 (3%) Query: 219 SQRFPFTINVNGPGATALAWHYLPTQLPLAVLLS----LLVGYIAWLATAYRMSFSREIN 274 S + L L + + Sbjct: 320 SPSIGIALYPQHGEDGETLIKNAEAALSFVKLQGRNNYKVYQAAINSQATELFILENSLY 379 Query: 275 LGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTR 334 L + EF+++ QP +N+ + + +E LLRW +P G I P FIPIAEE LI+P++ Sbjct: 380 NALERQEFKVYYQPQVNSSTGEITKMEALLRWQHPELGLIPPATFIPIAEETGLILPISE 439 Query: 335 YVMAETIRQRHVFPMS---SQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEI 390 +V+ Q + + S V +N + F++ L+ + Q + + L LEI Sbjct: 440 WVLKTACLQNKAWQQTLNLSSLSVAVNFSGRQFQQPNLVGIVEQVLCETKLAHRYLELEI 499 Query: 391 TERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIG 448 TE A+ DV+ I R+L V ++IDDFGTG SS S+L+ LKID+SF + Sbjct: 500 TETVAMQDVELTQKILRQLDEMGVTISIDDFGTGYSSLSYLKDFSIHALKIDQSFVQDLA 559 Query: 449 SDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFP 508 + + +T II+L LN+ +VAEGVETQEQ LR I+QGY ++ P+ + Sbjct: 560 NKDHQTAITTAIISLAHGLNLSVVAEGVETQEQLNALRILQCEIMQGYFFSHPLSAEEAT 619 Query: 509 KWLAGSQPPPARHN 522 + L QP + + Sbjct: 620 RMLTAYQPHRLKDS 633 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 5/266 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 +A + + L +HEFEL QP + + +G E LLRW +P G Sbjct: 770 FFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRHPELGM 829 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 ISP FIPIAE+ I+ + +V+ +RQ + + + +N++ FR L+ Sbjct: 830 ISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRHPNLMA 889 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSW 428 + + +A P + L LE+TE A+ D I +L ++++IDDFGTG SS S+ Sbjct: 890 LVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYSSLSY 949 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ + + LKID+SF I D + + II L L + +AEGVET Q +LR Sbjct: 950 LKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAFLRLQ 1009 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGS 514 G +QGY ++P+P F ++ S Sbjct: 1010 GCDEVQGYYVSKPLPKDQFEAFVRNS 1035 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 142/259 (54%), Gaps = 5/259 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + A R+ ++ G+ + EF L+ QP + + + VE L+RWN+P +G + P FIP Sbjct: 432 SAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIP 491 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS 379 AEE LI+PL R++M R+ ++ + + V +N++ F L+K++ S Sbjct: 492 RAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEILDALES 551 Query: 380 -AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P + L LEITE + D + + + +K V +AIDDFGTG SSFS+L+ D Sbjct: 552 SGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLDR 611 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKID+SF I + ++ + II LG LN++++AEGVE+Q Q + L+ QG+ Sbjct: 612 LKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQGF 671 Query: 497 LYAQPMPLRDFPKWLAGSQ 515 ++P+P + + L + Sbjct: 672 FNSRPLPPGELAERLKEMR 690 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 79/305 (25%), Positives = 142/305 (46%), Gaps = 13/305 (4%) Query: 224 FTINVNGPGATALAWHYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINL 275 +I + + L A+ + +A + + Sbjct: 740 VSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYCFFTTEMQARSARTLQIDNALRR 799 Query: 276 GLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRY 335 L +++F L QP L+ + + +G E L+RW +P+ G PD FIPIAE + I+P+ + Sbjct: 800 ALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEW 859 Query: 336 VMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQQLILEITE 392 V+ +RQ ++ + + +N++ FR L + + + L LE+TE Sbjct: 860 VLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTE 919 Query: 393 RDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD 450 A+ + + EL +K ++++IDDFGTG SS ++L+ LKID+SF + +D Sbjct: 920 GVAMENPLAAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPND 979 Query: 451 AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 + + +I+L L + VAEGVET+EQ ++LR G +QGY ++P+ + Sbjct: 980 TEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADAVFSF 1039 Query: 511 LAGSQ 515 + Sbjct: 1040 IEDDH 1044 >UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n=2 Tax=Clostridium RepID=A0PXI0_CLONN Length = 591 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 140/258 (54%), Gaps = 6/258 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + + ++F L QP ++ S +GVE L+RWN+P+ G + PD FIP+ Sbjct: 328 AYKRIEMIALLKHAVENNQFVLHYQPQVSLESGSVMGVEALIRWNHPKLGLVYPDKFIPL 387 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AE+ LI+P+ +V+ E RQ ++ S + V +N++ F + L+ + + Sbjct: 388 AEKTGLIIPMGEWVIREACRQNKIWHDSGFEELVVSVNLSALQFEKEDLVDVIVDALKTS 447 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L +EITE +++ D I +L VK+AIDDFGTG SS S+L+ D L Sbjct: 448 GLDPKFLEVEITEGILMVNTDKAIQTLNDLKEIGVKIAIDDFGTGYSSLSYLKEFPIDRL 507 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF I + N + +III L + L++ +VAEG ET + K+L+ +QGY Sbjct: 508 KIDRSFIMGIPKE-DNGAIANIIIELAKSLHLNVVAEGTETLDHIKFLKVRKCDTIQGYY 566 Query: 498 YAQPMPLRDFPKWLAGSQ 515 +++P+ F + L ++ Sbjct: 567 FSKPVSGEGFTEILRDNK 584 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 87/269 (32%), Positives = 138/269 (51%), Gaps = 5/269 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + R S ++ LA+ EFEL+ QP ++AR+ + G E L+RW++P +G Sbjct: 531 MFEGTMNARMQARRSLELDLRRALARQEFELYFQPQVDARTGRFDGAEALIRWHHPERGL 590 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDL 373 +SP FIP+AEE LI PL +V+ + + ++ V +N++P FR L + Sbjct: 591 VSPGEFIPLAEETGLIGPLGEWVLRTACAEARRW--ATPLPVAVNLSPVQFRDPRLAATV 648 Query: 374 NQYW-FSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLE 430 + P +L +EITE + D + EL +++++DDFGTG SS S+L Sbjct: 649 RGILAETGLPGSRLEIEITEGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYLR 708 Query: 431 TLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGV 490 D +KID+SF D + + I LG+ L I+ AEGVET +Q+ ++ G Sbjct: 709 RFPFDKIKIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEGC 768 Query: 491 HILQGYLYAQPMPLRDFPKWLAGSQPPPA 519 LQGYLY++P+P + + P A Sbjct: 769 DQLQGYLYSRPVPAESIAELFRAPRAPRA 797 >UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae RepID=C6UPQ0_ECO5T Length = 536 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 131/506 (25%), Positives = 226/506 (44%), Gaps = 30/506 (5%) Query: 21 ICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCS 80 + ++ + + F + A +++LD V ++ +++ L+ PC Sbjct: 41 VLIIIPGILGVLLSFAMSVFQMNRDTTITAGILLKQLDNVTQIVKHTTKLTSILVMKPCK 100 Query: 81 VAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDIL---AELPAPQPLLRLT 137 L A VR+ GL+++ CSS+ G++ + V D+ + + Sbjct: 101 DILEQLIANGALTPYVRTTGLIENNFQICSSVSGFKKMNVNDVYGTSFHNKNKESRIVSI 160 Query: 138 IDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTV------ 191 + + G ++ P ++ ++ + ++ S SL Sbjct: 161 SGTSFVPGKTAIVFLMP--IGNDMTAFSIVESRYIYDLMDVLDDENDDSFSLRFTEGPAI 218 Query: 192 -----DKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLP 246 + L +S +P+ I+ + LP Sbjct: 219 ISGVNNNDRLYMLKKDFNSAISQASLTVTTPMISLYPYVIS------------NVFYILP 266 Query: 247 LAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 L++LLS ++ ++ + +MS + EI G++ EF + QP+ + ++ C+GVE L+RW Sbjct: 267 LSILLSFILYFLWQRWISRKMSLAEEIKKGMSSGEFSVHYQPVCDTTTKACLGVEALMRW 326 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRR 366 ISP VFI AEE +LI+PLT+++ I+ + + FH+GIN+A H Sbjct: 327 QREDGKNISPVVFIRAAEEENLIIPLTKHLFELIIQDVQSWKVKKPFHLGINIAAEHLAH 386 Query: 367 GVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNS 424 + D+ + ++LEITER+ + D D+ + EL + A+DDFGTG Sbjct: 387 PDFVADVLHIKNAISDKFNIVLEITERNLVEDTDHALQKINELRSHGCEFAVDDFGTGYC 446 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 S L+ L D LKIDKSF + + + V DIII L RLN+ +AEGV T QA+Y Sbjct: 447 SLGLLQKLSVDYLKIDKSFIDTLTTAEDETPVLDIIIKLSNRLNLITIAEGVSTSHQAEY 506 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPKW 510 L + V ++QGYLYA+PM +F +W Sbjct: 507 LIHNNVTLVQGYLYAKPMKATEFYQW 532 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 139/269 (51%), Gaps = 5/269 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 L R++ + L + EF L+ QP +N ++ Q + +E L+RW NP G Sbjct: 431 LYTSSMDEQAFRRLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMGL 490 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIK 371 I P+ FIP+AE+ LI+PL +V+ Q + + V +N +P F++ L Sbjct: 491 ILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLTD 550 Query: 372 DLNQYWFSA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + Q A L LE+TE L +V+ + L + ++IDDFGTG SS S+ Sbjct: 551 MVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLSY 610 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 ++ L LKID+SF I ++A ++ + +I + Q L + ++AEGVET EQ K L Sbjct: 611 IKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGL 670 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 +QGYL+++P+P+ + L+ + P Sbjct: 671 NCPEMQGYLFSKPLPVAEMTTLLSNIKWP 699 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 138/262 (52%), Gaps = 6/262 (2%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 +R+S ++ L + L QP + R+ Q IG+E L+RW +P+ G I P FIP++E Sbjct: 560 HRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSE 619 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 + LIVP+ +VM Q ++ V +N++ + L+ + + S Sbjct: 620 DDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGL 679 Query: 382 PIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 Q L LEITE + +++ I + V+L++DDFGTG SS S+L+ L + LKI Sbjct: 680 DPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKI 739 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 DKSF I + ++ + IIAL L I+++AEGVE+ +Q +L +G +QGYL + Sbjct: 740 DKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLS 799 Query: 500 QPMPLRDFPKWLA-GSQPPPAR 520 +P P + L G + PA Sbjct: 800 RPRPFEEMEALLRDGGRLLPAS 821 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 134/255 (52%), Gaps = 5/255 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R++ + + L + EF L+ QP +N ++ + G+E LLRW +P G + P +F+ + Sbjct: 617 APERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFMSV 676 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LIV + +V+ Q + + +N++ FR+ L + + + Sbjct: 677 AEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPDLTGMIARILDET 736 Query: 380 AHPIQQLILEITERDALLDVD--YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P Q L LEITE A+ D++ R+ +EL +++++DDFGTG SS + L+ + L Sbjct: 737 GLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLNTL 796 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF + +++ ++ + +I L + LN+ +VAEGVE EQ L QGY+ Sbjct: 797 KIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQGYI 856 Query: 498 YAQPMPLRDFPKWLA 512 + +P+ + L Sbjct: 857 FNRPLEADAATEILQ 871 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 85/254 (33%), Positives = 139/254 (54%), Gaps = 5/254 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 ++ +A++E ++ QP + SQQ G+E L+RW +P++G ISP FIP+AEE Sbjct: 511 FELENDLRKAVARNELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPADFIPLAEET 570 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 LIV + +V+ + +Q ++ V +N++P FR L++++ + + Sbjct: 571 GLIVSIGEWVLRQACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAKTLKETGINP 630 Query: 384 QQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE + +D EL LAIDDFGTG SS S+L LKIDK Sbjct: 631 ACLELEVTESMIMDSIDKSTATMIELTELGAGLAIDDFGTGYSSLSYLRYFPLTKLKIDK 690 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + SD ++ + +IAL LN+++VAEG+E ++Q ++L + H QG+L+++P Sbjct: 691 SFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQGFLFSRP 750 Query: 502 MPLRDFPKWLAGSQ 515 +P D + L Q Sbjct: 751 VPAEDMEQLLRQIQ 764 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 96/261 (36%), Positives = 138/261 (52%), Gaps = 7/261 (2%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A A R+ ++ L + EFEL+ QP+L+ G E LLRW++P G I PD FIP Sbjct: 592 AAAERLHLENDLREALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRFIP 651 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 +AEE LI P+ +V+ E Q + V +NV+ F R L + + Q Sbjct: 652 LAEETGLIRPIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEA 711 Query: 379 SAHPIQQLILEITERDALL---DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 A L+LEITE + + + R REL V L++DDFGTG SS S+L+ D Sbjct: 712 QALAPDALVLEITESVLMHGSANTETR-LRELKAMGVGLSLDDFGTGYSSLSYLKRFPID 770 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKIDKSF + D + T+ +IA+G L +++VAEGVE+ E LRR +QG Sbjct: 771 TLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQG 830 Query: 496 YLYAQPMPLRDFPKWLAGSQP 516 Y +++P+P R +W+ Q Sbjct: 831 YHFSRPLPARALSRWIQQHQC 851 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 82/254 (32%), Positives = 142/254 (55%), Gaps = 5/254 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 R++ E++ L ++E ++ QP+++ ++QQ VE L+RW +P +G +SP FIPIA Sbjct: 305 QERLALENELHGALQRNEIVVYYQPIIDLQTQQITAVEALVRWQHPTRGLVSPAKFIPIA 364 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 E + LIV + +V+ Q + ++ + +N++ F L++ + + S Sbjct: 365 EANGLIVEIGEWVLRTACLQNRAWQLAGLPPIRMSVNLSARQFEESNLVELVGEIIQESG 424 Query: 381 HPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LE+TE + D+ I ++L V LA+DDFGTG SS ++L+ ++LK Sbjct: 425 LHPSYLELEVTESSLMADIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLK 484 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF + S+ ++ VT+ IIAL + L +++ AEG+ETQ+Q YL++ G QGY + Sbjct: 485 IDRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYF 544 Query: 499 AQPMPLRDFPKWLA 512 P P + + L Sbjct: 545 GIPAPANEITEILQ 558 >UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria RepID=A6SW06_JANMA Length = 459 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 231 PGATALAWHYLPTQLPLAVLLSLLVGYIAWLAT--AYRMSFSREINLGLAQHEFELFCQP 288 A T + ++ LL + + + R ++ L ++ L+ QP Sbjct: 148 DYALGADVRVPGTWIHNILVCGLLWTLLWVMQADLSERNVMEADLRKALQDNQLMLYYQP 207 Query: 289 LLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF- 347 + +G E LLRW +P +G +SP FIP+AE+ LI+P+ +V+ Q + Sbjct: 208 Q-TGNDGRIVGAEALLRWRHPVKGMVSPADFIPLAEQTGLILPIGHWVLGMACAQLISWS 266 Query: 348 --PMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI- 403 P ++Q + INV+ F++ + + S L LE+TE + DV+ I Sbjct: 267 KHPATAQLSLAINVSALQFKQPDFVSQVVSVLDRSGADPHLLELELTESMLVNDVNDIIA 326 Query: 404 -ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIA 462 L K ++L++DDFGTG SS S+L+ L D LKID+SF + D+ + T+ ++ Sbjct: 327 KMNALKEKGLRLSLDDFGTGYSSLSYLKKLPLDQLKIDQSFVRDMLFDSNDVTIVRTVVE 386 Query: 463 LGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 L + + + ++AEGVETQEQ ++L G QGYL ++P+P +F + Sbjct: 387 LARGMGLHVIAEGVETQEQRQFLAELGCLSFQGYLLSRPVPNAEFEAVVLAHNTA 441 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 145/277 (52%), Gaps = 12/277 (4%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 ++ ++ + ++EF L QP ++ +++ IGVE L+RW +P G +SP +FIP+AEE Sbjct: 589 KLILEADLRKAIERNEFVLHYQPQIDLNTRKLIGVEALIRWQHPSLGMVSPALFIPLAEE 648 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHP 382 LI PL +V+ Q ++ + + + +N++ ++ ++ + + Sbjct: 649 TGLICPLGEWVLRTACHQYRIWQKAGFPKIQMAVNLSAFQLQQDDIVARIAMILKETGMT 708 Query: 383 IQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L LEITE + +++ I +L + +K+AIDDFGTG SS + L+ L D LKID Sbjct: 709 PSDLELEITETTVMENLEQMTAILEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVDTLKID 768 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 KSF I D+ ++ + II LG+ ++++AEGVET Q ++LR QGYL ++ Sbjct: 769 KSFVQDITLDSNDAKLCQGIIMLGKAFELDVLAEGVETFTQLEFLRSLNCDRAQGYLISR 828 Query: 501 PMPLRDFPKWLAGSQ---PPPARHN----GHITPIMP 530 P+ + L +Q P P+ +P P Sbjct: 829 PLAPDALIELLLKAQTLIPSPSSQEVNLLHSSSPSWP 865 >UniRef50_Q220B0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B0_RHOFD Length = 701 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 83/269 (30%), Positives = 128/269 (47%), Gaps = 7/269 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R + + GLA EF L Q ++ G E LLRW +P +G Sbjct: 434 FFDPALQALALARTALEENLRRGLALQEFVLHYQIQVD-HQGLPTGAEALLRWQHPVRGM 492 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLI 370 + P FIP+AEE I+PL ++V+ RQ + + + + +NV+ F + + Sbjct: 493 VPPAQFIPLAEETGFILPLGQWVLESACRQLVAWSHQRATGSWTLAVNVSALQFAQPDFV 552 Query: 371 KDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 + ++ L LE+TE + DV I L + V A+DDFGTG SS S Sbjct: 553 AHVTSALQATSANPTLLKLELTESMLVGDVQDVITKMNALKAQGVSFALDDFGTGYSSLS 612 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ L D LKID+SF + + ++ + I+ALG L ++++AEGVET Q YL Sbjct: 613 YLKRLPLDQLKIDQSFVRDLLINPNDAVIAQTIVALGHNLGLQVIAEGVETVGQHDYLAS 672 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGSQP 516 G QGY + +P+P + L +P Sbjct: 673 IGCDAFQGYYFGRPVPAAELACLLKQIRP 701 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 79/254 (31%), Positives = 130/254 (51%), Gaps = 5/254 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ L ++ L QP + ++ +GVE L+RWN+P +G +SP FIP+AEE Sbjct: 700 LRMEADLKHALENNQLHLHYQPQFDLKNAGLVGVEALIRWNHPTEGPVSPGEFIPLAEET 759 Query: 327 HLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWFSA-HPI 383 LI PL R+V+ E RQ + + V +NV+ ++ + L + Sbjct: 760 GLIHPLGRWVLREACRQAKFWQNNFARIVPVAVNVSSLQLKKNNFVHVLEECLNEFQIDP 819 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 Q + LEITE + ++ + + LAIDDFGTG SS S+L+ LKID+ Sbjct: 820 QLIELEITESAVMDRLEKSMELLNAIKGLGFNLAIDDFGTGYSSLSYLKKFPFSKLKIDR 879 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 SF + +D ++ + II++ L ++ +AEGVET EQ +L HG +QG+L ++P Sbjct: 880 SFVMDLETDENDAAIITAIISMATSLGLKTIAEGVETVEQKHFLTDHGCDEVQGFLLSRP 939 Query: 502 MPLRDFPKWLAGSQ 515 + + S+ Sbjct: 940 LSADAIEEMYLSSK 953 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 82/253 (32%), Positives = 135/253 (53%), Gaps = 5/253 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 R+ ++ L ++EF L QP +N + +G E L+RW+ P +G + P FIP+A Sbjct: 578 LERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLPDRGLLWPLDFIPLA 637 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 EE I+P+ +V+ Q + + V +N++ F++ L +++ + Sbjct: 638 EESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKDNLTSTVDRILKETG 697 Query: 381 HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 L LEITE + +++ + + L V +AIDDFGTG SS +L+ LK Sbjct: 698 LSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYSSLGYLKRFPIGALK 757 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF I S+ ++ + II+LG+ LN+++VAEGVETQEQ LR + QGYL+ Sbjct: 758 IDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTVLRNYQCDEAQGYLF 817 Query: 499 AQPMPLRDFPKWL 511 +QP+ ++L Sbjct: 818 SQPVDADRMTEFL 830 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 85/273 (31%), Positives = 141/273 (51%), Gaps = 7/273 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R++ ++ L+ EF L+ QP + S++ IG+E L+RW +P GW Sbjct: 693 FFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVGW 752 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIK 371 + P FIP+AEE +I + R+V+ E RQ+ + + V +N++P ++ + Sbjct: 753 VPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDFPE 812 Query: 372 DLNQYWFSA--HPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFS 427 + S L LE+TE + DV + R+L + + +IDDFGTG SS Sbjct: 813 QVEALL-SGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSLG 871 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L D LKID+SF + ++ +T IIAL ++L++++VAEGVET EQ ++L R Sbjct: 872 YLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLER 931 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGSQPPPAR 520 G QG+ +++P+P + WL+ R Sbjct: 932 AGCDGAQGFYFSRPVPADEIAGWLSREGAVQDR 964 >UniRef50_B7KEZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=3 Tax=Cyanothece RepID=B7KEZ6_CYAP7 Length = 589 Score = 419 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 80/254 (31%), Positives = 135/254 (53%), Gaps = 5/254 (1%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ L ++E E+ QP L+ S + +G E L RW +PR+G +SP +FIPIAEE Sbjct: 330 LELEADLRHALERNELEVHYQPRLSLSSGEIVGAEALTRWYHPRRGLVSPGIFIPIAEET 389 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYW-FSAHPI 383 LI P+ +V+ Q ++ V +N++ F + L + + + + Sbjct: 390 GLIEPIGEWVLRTACEQSKIWQEKGLGLIRVAVNLSGRQFNQLNLSQWVAKILRETKINS 449 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 L LE+TE + + I +L VK+AIDDFGTG SS S+L+ D+LKID+ Sbjct: 450 HLLELELTESILVENASESIQKLNDLKTLGVKIAIDDFGTGYSSLSYLQQFPFDILKIDR 509 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 F I ++ N+ +T II L +L + +VAEG+ET+ + +L+ H +QGYL+++ Sbjct: 510 CFVRNIDQNSKNAAITQAIIFLAHQLGLTVVAEGIETKSELSFLQNHQCDEMQGYLFSRS 569 Query: 502 MPLRDFPKWLAGSQ 515 + +F + + Sbjct: 570 VKASEFEHLVQSRK 583 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 7/262 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R + ++ L + E L+ QP ++++ +G E L+RW +P+QG Sbjct: 971 FFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQ-GSLLGAEALVRWEHPQQGL 1029 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLI 370 +SP FI +AEE LI+P+ +V+ Q + P ++ + +NV+ + I Sbjct: 1030 LSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDFI 1089 Query: 371 KDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 + + Q L LE+TE + +++ I L V ++DDFGTG SS + Sbjct: 1090 DRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLA 1149 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ L LKID+SF + D+ ++++ IIALG L IE+VAEGVE+ EQ ++L + Sbjct: 1150 YLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEK 1209 Query: 488 HGVHILQGYLYAQPMPLRDFPK 509 HG QGYL+ +P P + Sbjct: 1210 HGCLEYQGYLFGRPQPAEQLER 1231 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 82/246 (33%), Positives = 139/246 (56%), Gaps = 5/246 (2%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 + E+ + Q +F L QP +N + + IGVE L+RW +P+ G ISP FIPIAE+ Sbjct: 324 TIEVELRKAIEQKQFTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSG 383 Query: 328 LIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQ 385 LIVP+ +V+ E +Q ++ +S V +N++P F L + + Sbjct: 384 LIVPIGNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAHTNLASVIKNTLFNTGLDPHL 443 Query: 386 LILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSF 443 L +EITE D+ + E+ + ++++IDDFGTG SS +L+ + LKID+SF Sbjct: 444 LEIEITESMT-ADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSF 502 Query: 444 TAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMP 503 + + ++ T+ II++ + LN+ +VAEG+ET+EQ +L++H H QG+L+++P+P Sbjct: 503 VSELHNNPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLP 562 Query: 504 LRDFPK 509 + Sbjct: 563 PSVLEE 568 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 132/258 (51%), Gaps = 5/258 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 R+ + + + Q + ++ QP ++ S + G+E LLRW +P G+ISP V Sbjct: 675 MNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAV 734 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQY 376 FIPIAEE LI + +V+ ++ Q ++ + +N++ ++ + Sbjct: 735 FIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTI 794 Query: 377 WFS-AHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 L+LEITE + + +I +L V+LA+DDFGTG SS S L+ L Sbjct: 795 LREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLP 854 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D LKID+SF I +D ++++ L LN+++ AEGVETQEQ ++R Sbjct: 855 LDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEY 914 Query: 494 QGYLYAQPMPLRDFPKWL 511 QGYL+++P+P + K+ Sbjct: 915 QGYLFSRPIPASEVVKYF 932 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 85/239 (35%), Positives = 134/239 (56%), Gaps = 7/239 (2%) Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + + L Q +F L+ QP ++ S + +G+E LLRW++P QG I+PD FIP+AE+ Sbjct: 312 LELETSLRQALGQKQFRLYYQPQIDIVSGRVLGLEALLRWHHPTQGMIAPDRFIPLAEKT 371 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQ 385 LI+P+ +V+ E Q V +N++ F + L+ + + + P Sbjct: 372 GLIIPIGEWVLREACSQVAT---QHGLKVAVNLSARQFHQKDLVAMIRRILDETGMPPVN 428 Query: 386 LILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSF 443 L LEITE + DV+ I +L+ V +++DDFGTG SS S+L+ D+LKIDKSF Sbjct: 429 LELEITESALIYDVELAIATMEQLNDLGVSVSLDDFGTGYSSLSYLKRFPIDMLKIDKSF 488 Query: 444 TAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPM 502 + +D ++ + II + L ++++AEGVET+ Q LR HG QGYL A+P+ Sbjct: 489 IDEVTTDPDSNVIVKTIIVMAHSLGLKVIAEGVETK-QLTMLREHGCDQAQGYLIARPL 546 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 5/260 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 A R+ R++ +A+ EFEL+ QP ++R G+E L+RW +P+ G I+P Sbjct: 549 MNRAATARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLR 608 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FIP+AEE +IV + +V+ E RQ + + + + +N++ R L+ + Sbjct: 609 FIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTT 668 Query: 377 WF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 S L LEITE + + D + + L V++AIDDFGTG+SS S+L+ Sbjct: 669 LAASGLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFP 728 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D LKID+SF + I DA ++ + ++L L + ++AEGVE+ Q LR G L Sbjct: 729 LDHLKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDEL 788 Query: 494 QGYLYAQPMPLRDFPKWLAG 513 QG+ +++P+ L Sbjct: 789 QGFHFSRPVTADVVENLLRS 808 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 136/267 (50%), Gaps = 7/267 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 +A R + + + + +F L Q + + G E+LLRW +P +G Sbjct: 687 FFDPSMEIALRERAAIEEALRYAIEEEQFLLHYQAQI-GEDGRIEGAEVLLRWQHPERGM 745 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS---QFHVGINVAPSHFRRGVLI 370 +SP +FIP+AEE IV L +V+ + Q + S + +NV+ R+ + Sbjct: 746 VSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQLRQPDFV 805 Query: 371 KDLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 + + +L LE+TE + DV+ I + L + ++DDFGTG SS S Sbjct: 806 EQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTGYSSLS 865 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ L LKID+SF + DA + + ++AL + L + ++AEGVET+ Q + L Sbjct: 866 YLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEAQRELLAG 925 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGS 514 G H QGYL+++P+P+ DF + ++G+ Sbjct: 926 IGCHCYQGYLFSRPLPIGDFERLVSGA 952 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 137/261 (52%), Gaps = 5/261 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T R+ ++ + + + E+F QP LN Q E L+RW +P+QG ++P FI + Sbjct: 698 TLERLQLENQLRKAIEEGQLEVFYQPKLNLADDQLNAAEALVRWRHPQQGLVAPGEFIGL 757 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LI P+ +V+ + RQ + + V +N++ R+G L + Q + Sbjct: 758 AEETGLIAPIGEFVLRQACRQARQWQQQGLAEIRVSVNISVYQLRQGNLTSLVRQVLEET 817 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L LE+TE L +VD + R+L VKLAIDDFGTG SS S+L+ + Sbjct: 818 GLAPQYLELELTESQLLDNVDSVVVTFRQLRELGVKLAIDDFGTGYSSLSYLKRFPVHYV 877 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID++F + ++ +T IIA+ L +++VAEGVETQ Q +L+ +QGYL Sbjct: 878 KIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKVVAEGVETQAQMDFLKSQNCDEIQGYL 937 Query: 498 YAQPMPLRDFPKWLAGSQPPP 518 ++P+ F + L + P Sbjct: 938 ISRPVEAAAFAELLRAQRDDP 958 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 85/267 (31%), Positives = 134/267 (50%), Gaps = 5/267 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 TA + + L + +FEL QP ++ + Q +G E LLRW++P G Sbjct: 715 FFTADLQARTARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPELGV 774 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFH-VGINVAPSHFRRGVLIK 371 ++P FIP+AE IV L +V+ R + V +N++ FR L + Sbjct: 775 VAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPE 834 Query: 372 DLNQYWFS-AHPIQQLILEITERDALLDV--DYRIARELHRKNVKLAIDDFGTGNSSFSW 428 + + P ++L LE+TE A+ D + +LH + V+L++DDFGTG SS S Sbjct: 835 MVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSC 894 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ + LKID+SF + DA + + II + Q L ++ AEGVET Q ++LR Sbjct: 895 LKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQ 954 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQ 515 G QGYL+++P+P F +L + Sbjct: 955 GCDEGQGYLFSRPLPADAFEAYLRAMK 981 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 16/338 (4%) Query: 187 ASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLP 246 A +T + ++ ++ P +++ +I ++ A L Sbjct: 422 AEVTTADDAAIVAKKILSAVALPHRIGRHELQISA---SIGISTCPNDADDAETLIKHAD 478 Query: 247 LAVLLS--------LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCI 298 +A+ + R S + L L + EF L QP +N + Sbjct: 479 IAMYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPKMNLETGHIT 538 Query: 299 GVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVG 356 G+E L+RW +P G + P FI +AE+ L+ P+ R+V+ E RQ + ++ V Sbjct: 539 GMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVA 598 Query: 357 INVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVK 413 +NV+ FRR + + + L LE+TE + + + I L VK Sbjct: 599 VNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSAGVK 658 Query: 414 LAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVA 473 LAIDDFGTG SS S+L L D LKID+SF + + N+ + II +G+ LN+ ++A Sbjct: 659 LAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIA 718 Query: 474 EGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 EGVETQEQ LR H QGY +++P+ + + L Sbjct: 719 EGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELL 756 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 34/334 (10%) Query: 182 PQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYL 241 S ++ VD + + D YQ + I P AL Sbjct: 636 GYEHHTSASIGVTLFDQQPTTVDEILKRADLAMYQSKAAGRNV-IRFFDPEMQAL----- 689 Query: 242 PTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 A R+ ++ GL EF L QP ++ + +G E Sbjct: 690 ---------------------IADRVEMEEDLRNGLRNDEFFLCYQPQVD-NQGRLLGAE 727 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS---QFHVGIN 358 LLRW NP++G I P FIP+AE+ LIV + +VM +Q ++ + +N Sbjct: 728 ALLRWRNPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVN 787 Query: 359 VAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLA 415 V+ R+ + + + + ++L LE+TE + +++ I EL V + Sbjct: 788 VSAKQLRQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKMTELKNIGVGFS 847 Query: 416 IDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEG 475 IDDFG G SS S+L+ L D LKID+SF + +D ++ + IIALG+ LN++++AEG Sbjct: 848 IDDFGIGYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQVIAEG 907 Query: 476 VETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPK 509 VET Q ++L +G QGYL+++P+P +F + Sbjct: 908 VETLSQREFLDNYGCDAYQGYLFSKPVPADEFER 941 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 83/265 (31%), Positives = 138/265 (52%), Gaps = 5/265 (1%) Query: 255 VGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 R + L LA+ EF L QP ++ + + +G E LLRW + +G I Sbjct: 671 FTEEMNRRVLERSGLEHNLRLALAREEFFLAYQPQVDQATGKVLGSEALLRWRHAEKGMI 730 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKD 372 SP FIP+AEE LI+P+ +V+ Q + ++ + +N++ F++ Sbjct: 731 SPGQFIPLAEESGLILPIGHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQFQQPDFFDQ 790 Query: 373 LNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWL 429 + Q + + L LE+TE + D D + R L V +AIDDFGTG SS S+L Sbjct: 791 VAQVLKDTELDPRYLELELTESLLMADADVAVETLRALRDLGVGIAIDDFGTGYSSLSYL 850 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 +T D +KI + F I D ++ + + +IA+ L +++VAEGVET+ Q ++LR Sbjct: 851 KTFPIDRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQLEFLRARR 910 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGS 514 ++QGY + +PMP +F ++L+ + Sbjct: 911 CQVMQGYYFGRPMPAENFIEYLSEN 935 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 91/264 (34%), Positives = 147/264 (55%), Gaps = 7/264 (2%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 + + + S ++ GL +H+F + QP ++ R Q+ GVE LLRW +P++G +SP Sbjct: 727 MQASVSANAALSTDLRAGLREHQFLVHYQPQVD-REQRITGVEALLRWKHPQRGMVSPAE 785 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFP---MSSQFHVGINVAPSHFRRGVLIKDLNQ 375 FIP+AEE LI+PL ++V+ + Q V+ ++ + +NV+ FR + + Sbjct: 786 FIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMA 845 Query: 376 YWF-SAHPIQQLILEITERDALLDVDYRIARE--LHRKNVKLAIDDFGTGNSSFSWLETL 432 + L LE+TE ++ IA+ L V LA+DDFG G SS S+L+ L Sbjct: 846 AIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRL 905 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D LKIDKSF A + SD ++ + II+L Q L ++++AEGVET+ Q +L G Sbjct: 906 PLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGY 965 Query: 493 LQGYLYAQPMPLRDFPKWLAGSQP 516 QG+L+ P+P+ +F ++ G+ P Sbjct: 966 YQGFLFCPPLPIAEFEAFMQGAAP 989 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 108/378 (28%), Positives = 167/378 (44%), Gaps = 36/378 (9%) Query: 148 VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEP--QLPQISSASLTVDKRHLLYGNGLVDS 205 V++ +A +AG + + + A P + + ++ +D Sbjct: 699 VIVLEGLSASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDE 758 Query: 206 LPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAY 265 L + D YQ + + P A+ A Sbjct: 759 LRKRADLAMYQAKAHGRN-ALRFFDPAMQAV--------------------------VAA 791 Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 R ++ L FEL Q ++AR G E LLRW +P++GWI+P FIP+AEE Sbjct: 792 RAELEVDLREALRLGAFELHYQAQVDAR-GCVSGAEALLRWQHPQRGWIAPASFIPLAEE 850 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSSQ---FHVGINVAPSHFRRGVLIKDLNQYWF-SAH 381 LI+PL +V+ Q + + +NV+ FR+ + S Sbjct: 851 TGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFRQADFAAQVLAAIERSGA 910 Query: 382 PIQQLILEITERDALLDVDYRIAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 ++L LE+TE L ++D I + L + ++DDFGTG SS ++L+ L D +KI Sbjct: 911 DPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSSLAYLKRLPLDEIKI 970 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D+SF + DA ++++ I+ALGQ LN+E+VAEGVET Q +L HG QGYL+ Sbjct: 971 DQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFLAEHGCQAYQGYLFN 1030 Query: 500 QPMPLRDFPKWLAGSQPP 517 +P P R F W AG P Sbjct: 1031 RPQPARQFEAWGAGHPCP 1048 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 89/302 (29%), Positives = 142/302 (47%), Gaps = 12/302 (3%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLS-------LLVGYIAWLATAYRMSFSREINLGL 277 +I ++ L LA+ S + +++ L Sbjct: 499 SIGISLFPNDGNDSITLLRNADLAMYQSKRHKGDFTFYSSDMNQHAVKILELEKDLRQAL 558 Query: 278 AQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVM 337 + E L QP ++ +S + +G E L+RW +P +G +SP FIP+AEE LIVP+ +V+ Sbjct: 559 ERGELLLHYQPKVSLQSGKIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWVL 618 Query: 338 AETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWFSA-HPIQQLILEITERD 394 + +Q + + +N++ FR G L ++ + L LEITE Sbjct: 619 EQACQQAISWQQQQLPTITMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITESM 678 Query: 395 ALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAV 452 + D + + L + V L++DDFGTG SS ++L D LKID SF + D+ Sbjct: 679 IMDDPEGAVQTMIALKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDSS 738 Query: 453 NSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512 ++ V I+ + L + VAEGVET EQ +L + ILQGYLY++P+P DF L Sbjct: 739 SAAVAVSIVDIAHHLGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAEDFTSLLR 798 Query: 513 GS 514 + Sbjct: 799 SN 800 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 7/272 (2%) Query: 252 SLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQ 311 S++ +S ++ L E L QP+++ + + +G E L+RW++P + Sbjct: 555 SMIFDRKMHQEILEAISLETDLRQALEAGELLLHYQPIVDVKDSRIVGFEALVRWDHPDR 614 Query: 312 GWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFP----MSSQFHVGINVAPSHFRRG 367 G + P FIP+AEE LI+PL R+V+ E RQ + ++ V +NV+ F + Sbjct: 615 GLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVKD 674 Query: 368 VLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNS 424 L++ + Q + P L LEITE + D ++ L VK+AIDDFGTG S Sbjct: 675 GLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVKIAIDDFGTGYS 734 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 S S+L L D LKID+SF + G D + + II+L + L + ++AEGVE +Q Sbjct: 735 SLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIAEGVECPDQLDR 794 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPKWLAGSQP 516 LR QG+++++P+ + + Sbjct: 795 LRLADCDKAQGFMFSRPVEATAAGRLIRQHPA 826 >UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJT4_ALKOO Length = 504 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 161/345 (46%), Gaps = 17/345 (4%) Query: 183 QISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGP--GATALAWHY 240 + L + K + + ++ S + T++V + Sbjct: 159 RGDEFVLLIQKEDSMEKIQKLSETIIKAMAMSFVFSEKEIHLTVSVGIAGYPWGGSNLNL 218 Query: 241 LPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNA 292 L +AV + L+ + ++ ++ L + EFEL+ QP +++ Sbjct: 219 LLQNAHIAVQAAKESSKSKHLVYDDSMNIKMNRKLELINNLHKALEKKEFELYYQPQIDS 278 Query: 293 RSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS- 351 + + +G+E LLRW NP G +SP FIP+AEE LI+P+ +V+ Q + Sbjct: 279 ETNEIVGLEALLRWQNPTLGRVSPAEFIPVAEETGLIIPIGDWVLKTACAQNATWQKEGY 338 Query: 352 -QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--AREL 407 V +N++ F + + + + + L LEITE A+ D I L Sbjct: 339 KPIPVSVNISTIQFNEPLFVDKVVTILKETTLNPKWLHLEITESVAINDATLTINVLNRL 398 Query: 408 HRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRL 467 + VK+A+DDFGTG SS +L + +VLKID SF IG D ST+T II LG+ L Sbjct: 399 QKIGVKIALDDFGTGFSSLGYLSKFKINVLKIDSSFVQDIGEDE--STITKTIIVLGKNL 456 Query: 468 NIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512 N+E+VAEGVET EQ YL+ G I+QGYL++ P+P K Sbjct: 457 NMEVVAEGVETNEQLDYLKNAGCDIIQGYLFSSPLPAGQIEKMFK 501 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 88/342 (25%), Positives = 161/342 (47%), Gaps = 12/342 (3%) Query: 189 LTVDKRHLLYGNGLVDSLPQPEDNENYQ-VSSQRFPFTINVNGPGATALAWHYLPTQLPL 247 + + + +++ +P E+Y+ + +I N ++ + L Sbjct: 598 IRDNNSAIEVARRIIERTREPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFR 657 Query: 248 AVLLS----LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEIL 303 A L + + T + +++ + + E E++ QP +N + + +G E L Sbjct: 658 AKDLGKNGYQIFTSSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAEAL 717 Query: 304 LRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAP 361 +RWN+P G +SP+ FIPI+EE LI+ L +V RQ + ++ + INV Sbjct: 718 IRWNHPEWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTA 777 Query: 362 SHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDD 418 F + + Q + L +EITE L + + + L++ V +++DD Sbjct: 778 KRFLSKDFMDAIQQILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDD 837 Query: 419 FGTGNSSFSWLETLR--PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGV 476 FGTG SS S+L+ + ++LKID+SF + + ++ + II L Q +N+ +VAEGV Sbjct: 838 FGTGYSSLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGV 897 Query: 477 ETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPP 518 ET EQ L+ ++QGYL+++P+ F + L P Sbjct: 898 ETGEQLHILKLLKCDLVQGYLFSRPVQAEAFAQLLKRGSLTP 939 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 136/254 (53%), Gaps = 3/254 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + R+ E+ + Q +F+++ QP ++ + G+E L+RW +P G I P+ FIPI Sbjct: 452 SLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPI 511 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSSQ-FHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 AEE +I+ L +++ + +Q + V +N++ + L++ + + Sbjct: 512 AEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETK 571 Query: 381 HPIQQLILEITERDALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKI 439 L LEITE + + + +++ ++++IDDFGTG SSFS++++L D +KI Sbjct: 572 LSPHWLELEITESIFVKMEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKI 631 Query: 440 DKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYA 499 D SF I + + + I+ + Q LN+ ++AEG+E +Q L+ +G QGYL++ Sbjct: 632 DASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFS 691 Query: 500 QPMPLRDFPKWLAG 513 +P+P DF + L Sbjct: 692 KPLPTDDFDQLLRQ 705 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 133/243 (54%), Gaps = 5/243 (2%) Query: 280 HEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAE 339 +EF L QP ++ S Q +G+E L+RW++P G + P FIP+AEE LI PL+ +V+ E Sbjct: 808 NEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLRE 867 Query: 340 TIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDAL 396 RQ + V +N++ F++ + K + Q + + L LE+TE + Sbjct: 868 ACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIM 927 Query: 397 LDVDYRIA--RELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNS 454 + + + ELH + LAIDDFGTG SS S+L+ D LKID+SF + IG + Sbjct: 928 RNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDE 987 Query: 455 TVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 T+T IIAL L ++++AEGVET Q +L+ +QG+ +A+P+ + L G Sbjct: 988 TITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELLHGG 1047 Query: 515 QPP 517 P Sbjct: 1048 LVP 1050 >UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6G7_9BACL Length = 700 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 86/317 (27%), Positives = 154/317 (48%), Gaps = 16/317 (5%) Query: 212 NENYQVSSQRFPFTIN--VNGPGATALAWHYLPTQLPLAV-------LLSLLVGYIAWLA 262 + + + +++ ++ A + + L +AV + L Sbjct: 382 DPGVLIDDTEYHISLSMGLSVFPNDADSVNELIQFADMAVHHAKEQGVEFLRYHAAMKQR 441 Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 T ++ ++ L + EF L QP + + + +G+E L+RWN+P++G I P FIP+ Sbjct: 442 TQAKVELENDMRKALEREEFFLEFQPQIRLDTGKMVGMEALVRWNHPKRGLIPPSEFIPL 501 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 AEE LIVPL +V+ + + M V +N++ FR+ L + +N Sbjct: 502 AEESGLIVPLGEWVLKTACQYNKKWQMDGFEPVCVSVNLSMRQFRQYNLAEHVNAILREV 561 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 Q L LE+TE D++ + L R + ++IDDFGTG SS +L++L D L Sbjct: 562 GLDPQYLELEVTESMT-YDIETALDQLHRLKRLGIHISIDDFGTGYSSLYYLKSLPIDRL 620 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID++F + D ++ + I + L +++ AEGVE +EQ ++L+R H QGYL Sbjct: 621 KIDRAFVKEVMYDGNDAAIVSTITTMAHHLKLKVTAEGVENEEQLEFLKRQRCHEGQGYL 680 Query: 498 YAQPMPLRDFP-KWLAG 513 +++P+ ++L+ Sbjct: 681 FSKPVSAGVLESEFLSR 697 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 417 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 100/331 (30%), Positives = 160/331 (48%), Gaps = 34/331 (10%) Query: 185 SSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQ 244 ++ ++ VD L + D YQ + T P A Sbjct: 797 HYSTPSIGITLFGDQRRTVDELLKRADLAMYQAKAAGRN-TQRFFDPDMQA--------- 846 Query: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 R ++ G+A+HE + QP+++ + + G E L+ Sbjct: 847 -----------------QVTARSQLESDLRQGIARHELTVHLQPIVDGST-RLCGAEALV 888 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAP 361 RW +P +G ISP FIP+AEE LI+PL R V+ Q + P ++ F + +NV+ Sbjct: 889 RWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNVSA 948 Query: 362 SHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDD 418 FR+ + ++ + Q+L LE+TE L DV+ I +L R V A+DD Sbjct: 949 RQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDD 1008 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG SS S+L+ L D++KID+SF + +D ++ + I+AL + L++++VAEGVET Sbjct: 1009 FGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVET 1068 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFPK 509 Q +L+ HG QGYL+ +P+PL F + Sbjct: 1069 AGQLSFLKLHGCEGFQGYLFGRPVPLEAFER 1099 >UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1U8_CHRVO Length = 513 Score = 417 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 160/513 (31%), Positives = 242/513 (47%), Gaps = 19/513 (3%) Query: 9 KTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGS 68 + +R + ++ + A + A+T +R V Q + +E +D +L + Sbjct: 8 RRHRLSHLLFALLVAALPFAATAPALLWQERQDLSASVRQQLDQGLELVDGILDQADEAA 67 Query: 69 EVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELP 128 VLLPL G PC A PLR+Q A VRS L+ T+YCSS+ G + + Sbjct: 68 RVLLPLAGGPCDKAVYPLRRQVAVAPFVRSAVLLDGDTVYCSSLSGSTSWAM----PARD 123 Query: 129 APQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSAS 188 Q ++L A+ P+L G + + ++ L L + Sbjct: 124 FVQGRMQLLSGNAVTPNVPLLYYRLHRGGDA---AVTAVDGRYLQLALQDASD--TIPVF 178 Query: 189 LTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNG--PGATALAWHYLPTQLP 246 L V + L P + S R+PFT+ N P W + Sbjct: 179 LQVGEHWLGPRRNGAGQAPALGQVAELR-RSSRYPFTVRANYDLPPWHRQLWSHHAPLTV 237 Query: 247 LAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 + +LL LL G + SF+ E+ LA EFE + QP++ G E+L+RW Sbjct: 238 ILLLLGLLAGATLYWLLGRPASFTGELRRALANDEFEGYLQPIVKPGLPDWRGAEVLMRW 297 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRR 366 +PR+G I PD+FIP AEE LIV +TR +M I + + FH+G+N++ +H + Sbjct: 298 RHPREGLIRPDLFIPRAEESGLIVEMTRRMMDAVIAKVGRLSLPQDFHLGVNISRAHLQE 357 Query: 367 GVLIKDLNQYWFSAHPIQQ---LILEITERDALLDVDY--RIARELHRKNVKLAIDDFGT 421 G L D ++ + + L LE+TER+ + + R L VK+A+DDFGT Sbjct: 358 GSLYGDCRRW--AGLLAESGAVLTLELTEREMVEITPEVEALFRSLDALGVKIALDDFGT 415 Query: 422 GNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQ 481 G+SS +L+ L D LKID+ F A IGSD ++ + D + L +L +E VAEGVET EQ Sbjct: 416 GHSSLVYLQQLTVDGLKIDQGFVAGIGSDGLSGHIVDSVAELAAKLGLETVAEGVETAEQ 475 Query: 482 AKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 YL R GV LQG+ A+PMPL +F + + Sbjct: 476 FDYLSRLGVGWLQGFYIARPMPLDEFVRRVRQG 508 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 417 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 93/326 (28%), Positives = 153/326 (46%), Gaps = 16/326 (4%) Query: 199 GNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLS------ 252 N ++ S+ +P + +Q+ +I ++ L +A+ + Sbjct: 522 ANKILSSMNKPFAIDGHQLHVT---ISIGISLYPTDGEDAETLLKNADIALYHAKEQGRN 578 Query: 253 --LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPR 310 T R+ + L +HE + QP + + Q G E L+ W +P Sbjct: 579 NYQFYNPALNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLHPE 638 Query: 311 QGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGV 368 G +SP FIP+AEE I + +V+ Q + F+V +N++ FRR Sbjct: 639 LGLLSPGHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRRPD 698 Query: 369 LIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSS 425 L+ + + + P + L LEITE A+ D++Y I L V AIDDFGTG SS Sbjct: 699 LVDQVRRVLNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSS 758 Query: 426 FSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYL 485 S L+ L LKIDKSF + +D + + IIA+ L +E++AEGVE +Q ++L Sbjct: 759 LSCLKKLPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFL 818 Query: 486 RRHGVHILQGYLYAQPMPLRDFPKWL 511 ++ +QG+LY++P+P DF + + Sbjct: 819 HQNHCDQMQGFLYSRPIPAEDFRRLI 844 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 5/265 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 L RM + L + EF L QP++NAR + +G E LLRW++P +G I PD+ Sbjct: 466 MNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDM 525 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FI +AEE IVPL +V+ R+ + + F + +NV+ F + + Sbjct: 526 FIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCSI 585 Query: 377 W-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + L LE+TE ++DV+ +L ++ + IDDFG G SS +L+ Sbjct: 586 IRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFP 645 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 D +KID+SF + S A + + + IIA+ RL +++VAEGVET EQ +L+ G H + Sbjct: 646 IDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEI 705 Query: 494 QGYLYAQPMPLRDFPKWLAGSQPPP 518 QG+ + +P+ F L + P Sbjct: 706 QGFYFHRPLSEELFKTLLWEIKDHP 730 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 137/269 (50%), Gaps = 5/269 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + R+ F ++ + + +FEL QP +N+ S + + VE L+RW +PR+G Sbjct: 944 FFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGL 1003 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP FIPIAEE LI+PL +V+ E RQ ++ + V +N++ LI Sbjct: 1004 VSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIP 1063 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + L LEITE A+ D I + L + L+IDDFGTG SS S+ Sbjct: 1064 MVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSY 1123 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L D LK+D+SF I + + + IAL L +E+VAEG+ET+ Q + L H Sbjct: 1124 LKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASH 1183 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 +QGYL++ P+P ++ Q Sbjct: 1184 RCDFMQGYLFSAPLPAERALAYIREQQAA 1212 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 144/324 (44%), Gaps = 11/324 (3%) Query: 191 VDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVL 250 + + N + +S ++ G + + A Sbjct: 372 IKDATRVAERIQATLKAPFNLNNHEVFTSASIGIALSSTGYERSEDILRDADIAMYRAKE 431 Query: 251 LSL----LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRW 306 L + I + ++ L + EFE++ QP+ + + G E L+RW Sbjct: 432 LGKARHEIFDKIMHARALELLRLENDLRRALERQEFEVYYQPITSLVTGMLTGFEALVRW 491 Query: 307 NNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS----SQFHVGINVAPS 362 +P G +SP FIP+AE+ LI+PL +V+ E RQ ++ + +N++ Sbjct: 492 RHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHTQFPTPEPLKMSVNLSGK 551 Query: 363 HFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDF 419 + LI+ ++ + L LEITE + + + + +L +N++L++DDF Sbjct: 552 QIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTKMLLQLRARNIQLSVDDF 611 Query: 420 GTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQ 479 GTG SS S+L + LKID+SF + + N+ + II L L ++++AEGVET Sbjct: 612 GTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIITLAHSLRMDVIAEGVETL 671 Query: 480 EQAKYLRRHGVHILQGYLYAQPMP 503 EQ L+ QGYL+++P+ Sbjct: 672 EQLTELKLLNCEQGQGYLFSKPLT 695 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 91/338 (26%), Positives = 154/338 (45%), Gaps = 35/338 (10%) Query: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY 240 P I + ++ + + L + D YQ + + P A Sbjct: 739 DPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQAKASGRN-AMRFFDPDMQA----- 792 Query: 241 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 A R E+ ++EF L Q ++ S+ IG Sbjct: 793 ---------------------AMNARAILESELYKSWERNEFILHYQLQVD--SRGIIGA 829 Query: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ---FHVGI 357 E L+RW +PR+G + P FIP AEE LI+PL +V+ Q + + + ++ + Sbjct: 830 EALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLSV 889 Query: 358 NVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRIARE--LHRKNVKL 414 NV+ F + ++ + + Q+L LE+TE + D+D IA+ L + V Sbjct: 890 NVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGF 949 Query: 415 AIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAE 474 A+DDFG G SS +L+ L D +KID+SF + +D ++T+ I+ L + + + ++AE Sbjct: 950 ALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAE 1009 Query: 475 GVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512 GVET Q +L HG QGYL+++P+PL F +++ Sbjct: 1010 GVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFERFVQ 1047 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 89/274 (32%), Positives = 146/274 (53%), Gaps = 8/274 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + R++ +E++ L Q +F L+ QP +N + GVE L+RW + ++G ISP FIP+ Sbjct: 797 SNKRLALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFIPV 856 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE LIVP+ +++ + F V +N++ F+ L++ +++ S Sbjct: 857 AEETGLIVPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNS 916 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 A L EITE + +V+ I + V LAIDDFGTG SS S+L+ + L Sbjct: 917 AIDPSMLEFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTL 976 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF +G D+ ++ + II++ Q LN+ +VAEG E EQ +L+ G +QGY Sbjct: 977 KIDQSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYY 1036 Query: 498 YAQPMPLRDFPKWLAGS---QPPPARHNGHITPI 528 +++P+P D + L + PP G + + Sbjct: 1037 FSRPLPQTDLERLLKDPNGIKMPPTVEMGKLVEV 1070 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 85/273 (31%), Positives = 140/273 (51%), Gaps = 11/273 (4%) Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 ++ R ++ + + EF L QP+++ ++++ IG E L+RW++P++G Sbjct: 440 IIFDQAMHTRAVKRWQLESDLRWAIERREFCLVYQPIVSIQTERLIGFEALVRWHHPQRG 499 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS--------SQFHVGINVAPSHF 364 WISP FI +AEE LI+PL +V+ E RQ + V +N++ F Sbjct: 500 WISPAEFISVAEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVSVNLSSKQF 559 Query: 365 RRGVLIKDLNQYWF-SAHPIQQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGT 421 + LI + Q + L LE+TE + + + +L ++LA+DDFGT Sbjct: 560 CQPDLIHYIQQVLQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGIQLALDDFGT 619 Query: 422 GNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQ 481 G SS S+L DVLKID+SF I ++ N + I++L + LN+++VAEGVETQ Q Sbjct: 620 GYSSLSYLHRFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVVAEGVETQAQ 679 Query: 482 AKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGS 514 +L+ QGYL ++P+ ++L Sbjct: 680 LDHLQALQCGYAQGYLISRPLTPEKTEQFLQEY 712 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 142/259 (54%), Gaps = 5/259 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + + + L + EF L QP +N + + +G+E L+RW +P G +SP FI Sbjct: 615 MNAKEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFI 674 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 PIAEE LIV L +V+ +Q ++ V IN++ F + L++ + Q Sbjct: 675 PIAEETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIE 734 Query: 379 -SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + QQL LEITE A+ ++++ I L V +A+DDFGTG SS ++L+ L + Sbjct: 735 STGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFN 794 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID+SF + + + + + +IALG+ L++++VAEGV+ +EQ + LR I+QG Sbjct: 795 TLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQG 854 Query: 496 YLYAQPMPLRDFPKWLAGS 514 YL+++P+ + L + Sbjct: 855 YLFSRPLSVDSTTDILQAN 873 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 97/303 (32%), Positives = 148/303 (48%), Gaps = 13/303 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLSL--------LVGYIAWLATAYRMSFSREINLG 276 +I + H L LA+ + + + RM + Sbjct: 400 SIGIAAYPMDGEDGHTLLKHADLAMYKAKELDRNNFHFFSHDMNIKVMERMMLENSMRKA 459 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L + EF L QP ++ARS + GVE LLRWN+P G ++PD FI +AEE IVPL +V Sbjct: 460 LERDEFFLVYQPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWV 519 Query: 337 MAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITER 393 + RQ + V +N++ F + L + ++ + + L LEITE Sbjct: 520 LMTACRQNRAWQKLGFPPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITES 579 Query: 394 DALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + + D I R L K + LAIDDFGTG SS S+L+ LKIDK+F I ++ Sbjct: 580 AIMRNADQNIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTNP 639 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 ++ + +IIIA+ Q L + ++AEGVET+ Q ++L H +QGYL+++P+ F L Sbjct: 640 DDAAIAEIIIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTDKFVYLL 699 Query: 512 AGS 514 Sbjct: 700 RDG 702 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 92/370 (24%), Positives = 156/370 (42%), Gaps = 24/370 (6%) Query: 171 LLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS--SQRFPF---- 224 + L S + + ++ S+R+ Sbjct: 291 RRSDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGGHE 350 Query: 225 -----TINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLA--------TAYRMSFSR 271 +I ++ + L A+ + +G + R++ Sbjct: 351 VFVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRNTYQYYSGSMNAMALERLTLEN 410 Query: 272 EINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVP 331 + L ++EF L QP L+A S + +G+E LL W+ P + PD FIP+AEE LI Sbjct: 411 NLRWALKRNEFRLCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGLIAS 470 Query: 332 LTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLIL 388 + +V+ Q + V +N++ FR L + + + + P L L Sbjct: 471 IGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSHLEL 530 Query: 389 EITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAA 446 EITE + + + + R+L + V+ ++DDFGTG SS S L D LKID+SF Sbjct: 531 EITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSFVRD 590 Query: 447 IGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRD 506 I +D + +T IIA+ + L + ++AEGVET EQ +LR +G +QG+L++QP+ Sbjct: 591 ISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLNPDA 650 Query: 507 FPKWLAGSQP 516 +L Sbjct: 651 AAAFLRARSR 660 >UniRef50_A8VZA5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=2 Tax=cellular organisms RepID=A8VZA5_9BACI Length = 579 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 136/262 (51%), Gaps = 4/262 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 L +++ + ++ + F+L QP + + IG E L+RW + G++ PD Sbjct: 315 IHLYYNNQLTLEKRLHKAVENRGFQLHYQPQYDLAHDRVIGFEALIRWQDDHLGFVPPDR 374 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW 377 FIP AEE LI+P+ V+ E R + VG+N++P F+ I + Q Sbjct: 375 FIPTAEETGLIIPIGHIVLEEACRMGKSWLDHGLDLRVGVNISPVQFQHPDFIHSVRQTL 434 Query: 378 -FSAHPIQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 + P +QL +EITE L + D +L R V ++IDDFGTG SS S+L T Sbjct: 435 AQTGLPAKQLDIEITENVLLYNRDECLNTLDQLKRLGVHISIDDFGTGFSSLSYLRTFPV 494 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 DVLKID+SF + ++ + + II L + ++++AEGVET + +L +Q Sbjct: 495 DVLKIDQSFVRDVSNNHNDQAIVTSIIQLAHNMGMKVIAEGVETDDSLHFLIDRECDQMQ 554 Query: 495 GYLYAQPMPLRDFPKWLAGSQP 516 GY+Y++P+P +LAG++ Sbjct: 555 GYIYSKPIPPEQISSFLAGNKT 576 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 108/373 (28%), Positives = 175/373 (46%), Gaps = 35/373 (9%) Query: 148 VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISS-ASLTVDKRHLLYGNGLVDSL 206 V+++ + A E++ LL ++ L ++ ++ VD L Sbjct: 484 VMLETLRPELTEAASQAEIVAEKLLASLNQPFALGGQQHYSTPSIGITLFGDERLSVDEL 543 Query: 207 PQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYR 266 + D YQ T P A A R Sbjct: 544 LKRADLAMYQAKGAGRN-TQRFFDPDMQA--------------------------AVNAR 576 Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ GLA+ E ++ QP+++ R+ + +GVE L+RW +P +G ISP FIP+AE+ Sbjct: 577 SNLEADLRQGLARGELCVYYQPVVDHRA-RLLGVEALVRWRHPVRGMISPADFIPLAEQT 635 Query: 327 HLIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWFS-AHP 382 LI+PL + V+ Q + + V +NV+ FR+ + ++ Q Sbjct: 636 GLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQGCGAD 695 Query: 383 IQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 ++L LE+TE L DV+ I +L R+ V A+DDFGTG SS S+L+ L D +KID Sbjct: 696 PRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLDQVKID 755 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 + F + +D ++ + I+AL Q L++E+VAEGVET Q +LR HG QGYL+ + Sbjct: 756 QGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGR 815 Query: 501 PMPLRDFPKWLAG 513 P P+ D +L+ Sbjct: 816 PGPVEDIDAYLSH 828 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 93/254 (36%), Positives = 137/254 (53%), Gaps = 4/254 (1%) Query: 265 YRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAE 324 R S ++ L + EF +F QP ++ R+ +GVE LLRW + G ISP FIP+AE Sbjct: 688 ERFSLVNDLRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAE 747 Query: 325 EHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHP 382 E LIVP+ +V+ E+ R ++ F +G+N+A L+ + S Sbjct: 748 EQGLIVPIGEWVLRESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIR 807 Query: 383 IQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L LE+TE L + I + + L++DDFGTG SS S+L+ L + LKID Sbjct: 808 PHLLDLEVTENFLLKQPEITIPKLHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTLKID 867 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF IGSD + II L + L +E +AEGVET EQ YLR HG H++QGY +++ Sbjct: 868 QSFVRDIGSDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSR 927 Query: 501 PMPLRDFPKWLAGS 514 P+P + P ++ Sbjct: 928 PLPAEELPDFVMNQ 941 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 5/268 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 +A + + + L +++ L QP ++ + + GVE LLRW++P G Sbjct: 489 FFTPTMQAQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGA 548 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP FIP+AE+ I+P+ +V+ + Q + + +N++ FR+ L++ Sbjct: 549 VSPAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLE 608 Query: 372 DLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 +++ L LE+TE A+ D I +LH K V+L++DDFGTG SS S Sbjct: 609 LVDRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSH 668 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ + LKID+SF + D + + II + Q L + AEGVET Q +LR Sbjct: 669 LKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQ 728 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQP 516 G QG+ +++P+ ++L Sbjct: 729 GCDEAQGFYFSRPLGAPHLQQYLLQRPA 756 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 17/334 (5%) Query: 192 DKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLL 251 D + ++ +L P D +V S ++ + L +A+ Sbjct: 345 DANLPRVADKILKALSSPFDLGVREVYSST---SVGIAIYPDDGDEATDLLRHADMAMYA 401 Query: 252 SL--------LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEIL 303 + RM + L Q EF + QP ++ + + GVE L Sbjct: 402 AKESGGDTFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEAL 461 Query: 304 LRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAP 361 LRW +P+ G I P FI +AEE +LI+PL +VM Q ++ F VGINV+ Sbjct: 462 LRWQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSG 521 Query: 362 SHFRRGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRIA--RELHRKNVKLAIDD 418 F + + + + + + L EITE + DVD + L + + +AIDD Sbjct: 522 RQFVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDD 581 Query: 419 FGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVET 478 FGTG SS S L+ L + LKIDKSF + + +A + + + IA+ +RL + + AEGVET Sbjct: 582 FGTGYSSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVET 641 Query: 479 QEQAKYLRRHGVHILQGYLYAQPMPLRDFP-KWL 511 + Q ++++ +QG+ +++P+ + WL Sbjct: 642 EGQYGFVQKRECDEVQGFYFSRPLSPSEVADAWL 675 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 7/266 (2%) Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 ++ ++ E+ + + E E++ QP+++ + + G E L+RW +P QG Sbjct: 1122 VMFDTAMSGRALAQLRLETELRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQG 1181 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS----SQFHVGINVAPSHFRRGV 368 ISP FIP+AEE LI+P+ ++V+ + Q + + +N++ F + Sbjct: 1182 MISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTN 1241 Query: 369 LIKDLNQYW-FSAHPIQQLILEITERDALL--DVDYRIARELHRKNVKLAIDDFGTGNSS 425 LI+ + Q + L LEITE + D + L N++L IDDFGTG SS Sbjct: 1242 LIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSS 1301 Query: 426 FSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYL 485 S L D LKID+SF + +G N + I+ L L +++VAEG+ET Q L Sbjct: 1302 LSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQL 1361 Query: 486 RRHGVHILQGYLYAQPMPLRDFPKWL 511 R QGY +++P+ + + + Sbjct: 1362 RGRRCEYGQGYFFSKPLNRQAAEQLM 1387 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 6/260 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 + + + ++E L QP + R G+E LLRW++ G ISP FIP+ Sbjct: 1250 ATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALLRWHHTELGPISPVEFIPL 1309 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF-S 379 AEE +I + +V+ +Q + + +N++ + +I + S Sbjct: 1310 AEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSARQLK-ADIISTIEVALAVS 1368 Query: 380 AHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 P Q L LE+TE + + I +L + +AIDDFGTG SS S+L+ D L Sbjct: 1369 GLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGTGYSSLSYLKRFPIDTL 1428 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+ F I +D ++ +T IIAL L + +VAEGVETQ Q +L G +QG+L Sbjct: 1429 KIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQLNFLGLQGCDEVQGFL 1488 Query: 498 YAQPMPLRDFPKWLAGSQPP 517 ++P+ +D L Sbjct: 1489 LSKPLSAKDCLTLLGNQSKQ 1508 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 89/385 (23%), Positives = 154/385 (40%), Gaps = 24/385 (6%) Query: 149 LIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQ 208 + +++ + + L+ + + L + + Sbjct: 465 FVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMGGDEFLVVLNNLSGPDE 524 Query: 209 PEDNENYQVSSQRFPF-----------TINVNGPGATALAWHYLPTQLPLAVL------- 250 V+ R P ++ V + L +A+ Sbjct: 525 AATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYRAKDEGR 584 Query: 251 -LSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNP 309 L + R++ ++ L + E +L+ QP++ A + + VE LLRW +P Sbjct: 585 NSFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRHP 644 Query: 310 RQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRG 367 G +SP FIP+AE+ LIVP+ +V+ + + H+ +N++ FR Sbjct: 645 DLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREE 704 Query: 368 VLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNS 424 + + L LE+TE + D D + L V LAIDDFGTG S Sbjct: 705 GFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYS 764 Query: 425 SFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKY 484 S ++L+ D LKID+ F I + ++ + I++LG L + +VAEGVET Sbjct: 765 SLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDV 824 Query: 485 LRRHGVHILQGYLYAQPMPLRDFPK 509 LRR G + QG+ ++ P+P +F K Sbjct: 825 LRRQGCDLAQGFHFSPPLPWEEFVK 849 >UniRef50_A0YP68 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=2 Tax=Oscillatoriales RepID=A0YP68_9CYAN Length = 575 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 139/258 (53%), Gaps = 5/258 (1%) Query: 264 AYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIA 323 +++ ++ L ++F+L+ QP ++ ++ Q IG E L+RW ++G++SP VFIP+A Sbjct: 315 HDQIALENDLRQALEHNQFQLYYQPKVDLKTGQIIGAEALIRWIESKRGFVSPAVFIPLA 374 Query: 324 EEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDL-NQYWFSA 380 EE LI P+ +V+ RQ + + +N++ F + + Sbjct: 375 EEIGLIEPIGEWVLRTACRQTKTWHKLGLETLKMAVNLSGCQFNLPDICPMVLETLLAED 434 Query: 381 HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 P L LE+TE + D I L +K+AIDDFGTG SS S+L+ DVLK Sbjct: 435 LPSSCLELELTESFLVEHEDASIQKLNRLKALGLKIAIDDFGTGYSSLSYLQQFPFDVLK 494 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 +D+ F I + N + + +I + +LN+E+VAEGVET + LR++ I+QGYL+ Sbjct: 495 LDRCFVQNIDQNPKNKIIVEAVIKMAHQLNLEVVAEGVETTAELHVLRQYQCDIIQGYLF 554 Query: 499 AQPMPLRDFPKWLAGSQP 516 ++P+P ++F + ++ Sbjct: 555 SRPIPAQEFQALVESNKS 572 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 94/356 (26%), Positives = 158/356 (44%), Gaps = 17/356 (4%) Query: 183 QISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFT--INVNGPGATALAWHY 240 ++ V G + E + + R + + + Sbjct: 680 GGDEFTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQT 739 Query: 241 LPTQLPLAVLLSLLVG------YIAWLAT--AYRMSFSREINLGLAQHEFELFCQPLLNA 292 L +A+ + G Y + R+ ++ + + Q FEL QP+++ Sbjct: 740 LLRNADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDC 799 Query: 293 RSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS- 351 S +G E L+RW +P +G ISP FIP+AEE LIVP+ +V+ E +RQR + Sbjct: 800 ASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGH 859 Query: 352 -QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQQLILEITERDAL---LDVDYRIARE 406 + +NV+ FR L + + L+ EITE + +V+ R + Sbjct: 860 PPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEAR-MCD 918 Query: 407 LHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQR 466 + + + A+DDFGTG SS S+L+ D++KID+SF D ++T+ + II + Sbjct: 919 IKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHS 978 Query: 467 LNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHN 522 L + + AEGVE+ EQ ++LR G LQGYL +P+ F +A + A + Sbjct: 979 LGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFEALMAPLRSAAAAPH 1034 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 87/273 (31%), Positives = 144/273 (52%), Gaps = 5/273 (1%) Query: 255 VGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWI 314 L + RMS ++ L + ++EFEL+ QP + S Q +G E L+RW++P++G + Sbjct: 341 YAAGMQLYSLDRMSLETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWHHPQRGLL 400 Query: 315 SPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKD 372 +P FI IAEE LIV + ++V++E RQ + + +N++ F + Sbjct: 401 TPIHFIEIAEETGLIVAIGQWVISEACRQHQAWLQEGFQPMRISVNISAMQFYQSDFCDM 460 Query: 373 LNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWL 429 + + L E+TE + D D + +L R +KLAIDDFGTG S+ S+L Sbjct: 461 VEHILKETRINPAYLEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTGYSNLSYL 520 Query: 430 ETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHG 489 D LK+D+SF I + +N + I+AL + +++ELVAEGVET + + G Sbjct: 521 RKFPIDRLKVDQSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVELHWAESSG 580 Query: 490 VHILQGYLYAQPMPLRDFPKWLAGSQPPPARHN 522 +QGY ++QP+P F +W+ + +H+ Sbjct: 581 CTFVQGYRFSQPLPAEKFTRWVREYKYQANQHS 613 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 6/261 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 T + ++ L + E +F QP +N ++ + GVE LLRWN+ G Sbjct: 671 FFSEGMDTRTFESIKLENDLYKALERDELIIFYQPQINYKTNKIKGVEALLRWNHREHGM 730 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIK 371 I+PD FIP+AEE LIVP+ +V+ E +Q + + +N++ F + L Sbjct: 731 ITPDRFIPLAEETGLIVPIGEWVLKEACKQLKEWHNQGYPLISMSVNLSVHQFEQNNLFS 790 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + + + L LE+TE + + + + +L+ V LAIDDFGTG SS + Sbjct: 791 IIENVLYETDLSPEYLQLELTENLIVKNTEVTLKTMTQLNGLGVNLAIDDFGTGYSSLGY 850 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ L LKIDKSF + +D + +T+ II L Q L +E++AEGVET+EQA YL Sbjct: 851 LKNLPISTLKIDKSFVQEMLTD-DAAAITNTIITLAQNLKLEVIAEGVETKEQADYLLEQ 909 Query: 489 GVHILQGYLYAQPMPLRDFPK 509 H++QGY +++PM + K Sbjct: 910 NCHLMQGYFFSKPMKAGEIMK 930 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 130/265 (49%), Gaps = 5/265 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 R+ ++ L EF L QP ++ G E LLRW +PR+G Sbjct: 1142 FYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGL 1201 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIK 371 + P FIP+ EE L+ + +++AE +Q + + V +N++ F G L + Sbjct: 1202 VPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGE 1261 Query: 372 DLNQYW-FSAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSW 428 + + P L LE+TE + DV I L R + +A+DDFGTG SS ++ Sbjct: 1262 RIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNY 1321 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ DVLKID+SF + ++ + IIA+ LN+ ++AEGVE+Q Q +LR H Sbjct: 1322 LKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREH 1381 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAG 513 G +QGYL+ +PMP F A Sbjct: 1382 GCDEVQGYLFGRPMPAEQFGMLYAS 1406 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 84/253 (33%), Positives = 142/253 (56%), Gaps = 7/253 (2%) Query: 268 SFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHH 327 + ++ + Q +F+L QP A + IG E LLRW +P +G +SP FIP+AEE + Sbjct: 680 ALVVDLRQAIWQGQFQLHYQPQ-TANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESN 738 Query: 328 LIVPLTRYVMAETIRQRHVF---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPI 383 LI+ + R+V+ E Q + P + + +NV+ FR+ + ++ + + Sbjct: 739 LILAIGRWVLEEACGQLAAWADLPAAGNCKLAVNVSARQFRQPEFVAEIRRILAATGADP 798 Query: 384 QQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDK 441 + L LE+TE + ++ + +EL + ++DDFGTG SS + L+ L + LKID+ Sbjct: 799 KLLKLELTESIVMTELADTVSKMQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDR 858 Query: 442 SFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQP 501 +F +GSD + + + IIA+G+ L+I+++AEGVET+EQ L R+G QGYL+++P Sbjct: 859 AFVRDLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRP 918 Query: 502 MPLRDFPKWLAGS 514 +P F L Sbjct: 919 VPAAQFAHLLTSG 931 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 90/257 (35%), Positives = 139/257 (54%), Gaps = 5/257 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 T ++ ++ LA+ EFE+ QP ++ S Q +G E L+RW +P +G P FI Sbjct: 391 QTYRQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRWRHPEKGLQPPANFIA 450 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFS 379 IAEE +I L +V+ + + + IN++ FR+ L++ S Sbjct: 451 IAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQFRQSDLVEQCRNTIRS 510 Query: 380 -AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + LE+TE + D+D + R+L+ V+LAIDDFGTG SS + L+ D Sbjct: 511 AGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLKHFPIDT 570 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKIDKSF I D + + I+AL + L +E+VAEGVET+EQ +L+R G I+QGY Sbjct: 571 LKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQGY 630 Query: 497 LYAQPMPLRDFPKWLAG 513 +++P+P F ++L G Sbjct: 631 FFSRPLPFEGFREYLKG 647 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 100/358 (27%), Positives = 157/358 (43%), Gaps = 24/358 (6%) Query: 185 SSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPF-----------TINVNGPGA 233 + DS Q D + +++ P +I ++ Sbjct: 435 RGMLARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPH 494 Query: 234 TALAWHYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLGLAQHEFELF 285 L +A+ + T R+ + + L +HEFEL Sbjct: 495 DGRDARTLLKNADVAMYRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERHEFELH 554 Query: 286 CQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRH 345 QP L+A + G E LLRW +P+ G + P FI +AEE LI P+ +V+ E RQ Sbjct: 555 YQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLA 614 Query: 346 VFPMSSQ--FHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQ-QLILEITERDALLDVDYR 402 + + +N++P F + L + +A +L LEITE + Sbjct: 615 AWDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEA 674 Query: 403 I--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDII 460 + EL V L+IDDFGTG SS S L+ D LKID+SF + D N+ + + I Sbjct: 675 VSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAI 734 Query: 461 IALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPP 518 +A+ ++L ++VAEGVE++EQA +L G H+LQGY + +P+P +F AG + Sbjct: 735 LAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFAALAAGWRREA 792 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 137/262 (52%), Gaps = 5/262 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 + ++ +A HE EL+ QP ++ ++ Q GVE L+RW P G I PD FIP Sbjct: 434 RVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFIP 493 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF- 378 IAE+ LI+P+ +V+ Q + + +N++ FR+ + + Sbjct: 494 IAEDCGLILPIGEWVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTTLEE 553 Query: 379 SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 + L LE+TE + D + REL V L++DDFGTG SS S+L+ L DV Sbjct: 554 TGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDV 613 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 +KID+SF + + A +++T IIA+ + L++E VAEGVET+ Q +L RH H +QGY Sbjct: 614 VKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGY 673 Query: 497 LYAQPMPLRDFPKWLAGSQPPP 518 ++ P+ + L+ P Sbjct: 674 YFSHPVTGDEIADMLSAGSQLP 695 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 91/374 (24%), Positives = 165/374 (44%), Gaps = 35/374 (9%) Query: 148 VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQIS-SASLTVDKRHLLYGNGLVDSL 206 V+++ A A E + +++ + L + ++ ++ ++D L Sbjct: 785 VMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFEVHSTPSIGATLFDSRPQIIDDL 844 Query: 207 PQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYR 266 + D YQ T+ P R Sbjct: 845 FKQADIAMYQAKKAGRN-TMRFFDPQMQDTL--------------------------NTR 877 Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + ++ + + EF LF Q ++ + +G E L+RW +P++G +SP FIP+AEE Sbjct: 878 TALEADLRKSIERREFNLFYQIQVD-EMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEET 936 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS---QFHVGINVAPSHFRRGVLIKDLNQYWFS-AHP 382 LI+ + +V+ E Q + + + +NV+ FR+ + + A Sbjct: 937 DLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAID 996 Query: 383 IQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 +L LE+TE +++ I L V+ ++DDFGTG SS +++ L + LKID Sbjct: 997 PSKLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKID 1056 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF + D + + IIA+ + L ++++AEGVETQEQ + L G QGYL+++ Sbjct: 1057 QSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSK 1116 Query: 501 PMPLRDFPKWLAGS 514 P+P+R+F L + Sbjct: 1117 PLPIREFDALLERA 1130 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 92/329 (27%), Positives = 155/329 (47%), Gaps = 15/329 (4%) Query: 199 GNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVL-------- 250 ++ + QP D ++ +I + L A+ Sbjct: 591 AEKILAACNQPFDVGGHEAYIAG---SIGIAIFPDDERDPILLMRNADAAMYRSKREGKG 647 Query: 251 LSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPR 310 + M ++ + ++E ++ QPL+++ + + +G E LLRW+NP Sbjct: 648 VFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPV 707 Query: 311 QGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ-FHVGINVAPSHFRRGVL 369 G +SP+ FIP+AEE LI+ + +V+ R + V +N++ F++ L Sbjct: 708 LGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISGKQFQKRTL 767 Query: 370 IKDLNQYW-FSAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSF 426 ++ + S P L LE+TE L I +EL V AIDDFGTG SS Sbjct: 768 VEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSSI 827 Query: 427 SWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLR 486 S+L D LKID+SF +G + ++ + IIA+ +++++V EGVET Q ++LR Sbjct: 828 SYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREFLR 887 Query: 487 RHGVHILQGYLYAQPMPLRDFPKWLAGSQ 515 G HI QG+LY++P+P +DF + + G Sbjct: 888 LSGCHIAQGWLYSRPIPGKDFQELIDGWT 916 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 138/265 (52%), Gaps = 7/265 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 A R + E+ L L E L QPL+N +G E L+RW +P++G Sbjct: 584 FFDPSMLQAVLARAALESELRLALESDELLLHYQPLVN-GDGSMLGAEALVRWRHPQRGL 642 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPM---SSQFHVGINVAPSHFRRGVLI 370 + P FIP AE+ LIV L ++V+ Q + ++Q + +NV+ FR+ + Sbjct: 643 VMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWSRSAATAQLVLAVNVSVRQFRQPDFV 702 Query: 371 KDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 L Q S + L +E+TE + DV+ I +L V AIDDFGTG SS + Sbjct: 703 DQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGTGYSSLA 762 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+ L D LKID+SF + +D ++ + I+AL + L++E+VAEGVET Q K+L+R Sbjct: 763 YLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQLKFLQR 822 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLA 512 HG QG+L+ +P P + L Sbjct: 823 HGCKAFQGHLFGRPAPAAVLERALR 847 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 143/262 (54%), Gaps = 5/262 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 R+ +++ L + EF ++ QP ++ +S + +G+E L+RWN+ G + P Sbjct: 443 MNAKALERIILESQLHKALKEEEFIVYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGR 502 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 F+P+AEE L++ + ++VM E RQ ++ + + IN++ F + L++ + Sbjct: 503 FLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGFPPVTLAINISGQQFMKNELLETVTSV 562 Query: 377 W-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 S L LE+TE + + + + L V+LAIDDFGTG SS S+L+ Sbjct: 563 LKESGLDPGLLELELTEGVLMAHTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFP 622 Query: 434 PDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHIL 493 DVLKID++F I +D ++ +T I + + ++++AEGVET+ Q +L ++G + Sbjct: 623 LDVLKIDRTFINDITTDPDDAAITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMY 682 Query: 494 QGYLYAQPMPLRDFPKWLAGSQ 515 QGYL+++P+P + P+ Q Sbjct: 683 QGYLFSKPVPSTELPRLFNRWQ 704 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 91/283 (32%), Positives = 144/283 (50%), Gaps = 6/283 (2%) Query: 253 LLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQG 312 + + ++ ++ LA+ EFEL QP + IG E L+RW +P +G Sbjct: 572 AIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVR-ADLTLIGAEALIRWRHPEKG 630 Query: 313 WISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINVAPSHFRRGVLI 370 I+P FIP+AEE LI+P+ R+ + E + + V +NV+P F+ L+ Sbjct: 631 LINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLV 690 Query: 371 KDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFS 427 + + Q + + L LEITE DV++ + R L V L+IDDFGTG SS + Sbjct: 691 ETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLN 750 Query: 428 WLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRR 487 +L+T D LKID++F + ++ + IIAL + L +VAEGVE EQA++L Sbjct: 751 YLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGS 810 Query: 488 HGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMP 530 QG+LY++P+P +F +L ++ A + I P Sbjct: 811 RDCQNFQGFLYSRPLPPAEFTTFLRTAKLETATPPDLVPSIAP 853 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 7/261 (2%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 + R++ E+ + + + +F L+ Q +++ + +G E L+RW NP G + P Sbjct: 328 MQESINARITLENELRIAIEKSQFHLYYQIQMDS-DNRVLGAEALIRWTNPEHGLVLPAT 386 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFP---MSSQFHVGINVAPSHFRRGVLIKDLN- 374 FIPIAEE LI+ + ++V+ Q V+ + + +NV+ FR+ + + Sbjct: 387 FIPIAEETGLILSIGKWVIETACAQIKVWQKKSQTRDLTLAVNVSAKQFRQKDFVDQVQS 446 Query: 375 QYWFSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETL 432 A P L LE+TE D + I + L++ V+ ++DDFGTG SS +L+ L Sbjct: 447 AVQRHAIPGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSSLQYLKRL 506 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D KID+SF I +D + + IIA+ Q L+I+++AEGVET+EQ + L G + Sbjct: 507 PLDQFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLLLGKGCTL 566 Query: 493 LQGYLYAQPMPLRDFPKWLAG 513 QGYL+++P+P+ F + Sbjct: 567 YQGYLFSKPIPIDQFDALIGR 587 >UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholderia cepacia complex RepID=A9AQW1_BURM1 Length = 588 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 141/514 (27%), Positives = 234/514 (45%), Gaps = 15/514 (2%) Query: 13 RNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAG-SEVL 71 R I ++ A L + R+ + A +D++L L++ ++VL Sbjct: 80 RLAFCAVVIACVLVPAGALVLAGRYARDAVARHEGLVAGDIAASVDRILNSLRSRHADVL 139 Query: 72 LPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQ 131 PL+G PC PL + +L+ +R+I LV L CSS G + P+ D PA Sbjct: 140 PPLVGRPCRQIFAPLAEAETRLRYLRAIALVNGNRLTCSSALGAIDAPL-DAYVRAPAAT 198 Query: 132 P-----LLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISS 186 P + L + +G PVL+ + A +AGV+ +I D + L S Sbjct: 199 PAADGTRIALLSETPYQRGIPVLVAFRATA--RDAGVLYLIEGDYVADALAHSGSYGAES 256 Query: 187 ASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGP--GATALAWHYLPTQ 244 A+L++ L G + ++S+ +PFT++V + + Y Sbjct: 257 ATLSIAGAGRLDHRGRFIPASRAVRPRGTAIASRAWPFTVSVVASAQYVSQVERRYRLLF 316 Query: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 +A+L+ LV +ATA R + + L ++EF + QP++ +++ +GVE LL Sbjct: 317 GTIALLVDALVVAAYLIATAPRRLLLKAVGDALRRNEFHVVYQPIVEIETRRTVGVEALL 376 Query: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHF 364 RW++P+ G ISP F+P E ++ +T YV+ + + + + INVAP Sbjct: 377 RWHHPKWGAISPTAFVPQVESSAVLPRVTEYVLRTAVSELTALAPAMPLRIAINVAPKDL 436 Query: 365 RRGVLIKDLNQYWFSAHPIQQLILEITERDALLD--VDYRIARELHRKNVKLAIDDFGTG 422 R + +++ P L+LE+TER L + L K VK AIDDFGT Sbjct: 437 ERPRFMSIVDEAIRRLPPGFTLVLEVTERVLLEKNPRTTAMFAALRAKGVKFAIDDFGTQ 496 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 +S+ L D +KID+ F A + D ++ + + I A+ +++VAEGVET+EQ Sbjct: 497 HSNLDMLSRFPFDYVKIDRQFVAQL--DGGSARLIEGIAAVAHHYGLKIVAEGVETEEQH 554 Query: 483 KYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQP 516 + L G+ QGYLY +P L + Sbjct: 555 RALHAVGIQYAQGYLYRRPQRAEQLMDGLVSAPA 588 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 6/272 (2%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 + + R + S + G+ + EF + QP + ++ IG+E L+RWN+P G Sbjct: 549 FFTNELNESVSRRSNLSMALRKGIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPELGM 608 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIK 371 ISP FIPIAEE I L +V+ E RQ + + F V +N++ F + L + Sbjct: 609 ISPGEFIPIAEETGSIHRLGEFVLNEACRQNKAWQDASIPPFRVAVNISAVQFAQKDLPE 668 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 +++ S Q L LE+TE + D I EL V L+IDDFGTG SS S+ Sbjct: 669 VVSRALAASGLEAQYLELELTESV-IQSADRAIETMHELVALGVHLSIDDFGTGYSSLSY 727 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ D LKID+ FT I SD ++ + II + L++ ++AEGVET+ Q +L+ Sbjct: 728 LKLFPIDTLKIDQHFTKNIESDEKDAALVKTIIRMAHELDLNVIAEGVETENQVAFLKAE 787 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPAR 520 + QGY Y +P+P + + + + Sbjct: 788 SCNQAQGYFYNRPLPAEEIEVFFQQYKKASSS 819 >UniRef50_C5D169 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Variovorax paradoxus S110 RepID=C5D169_VARPS Length = 723 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 94/273 (34%), Positives = 141/273 (51%), Gaps = 5/273 (1%) Query: 254 LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGW 313 A ++ + +A+ EF L QP L+ S + GVE L+RW +P +G Sbjct: 438 FYAAEMSGAIRDELALREGLRHAVARSEFHLAYQPQLDMESGRVTGVEALIRWQHPERGL 497 Query: 314 ISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIK 371 +SP FIP+AEE LIVP+ +V+ Q + + F V +NV+ FR LI Sbjct: 498 VSPAQFIPLAEETGLIVPIGEWVLRTACFQNKAWQDAGLPPFIVSVNVSARQFRERTLIA 557 Query: 372 DLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSW 428 + S + L LE+TE + D+D + + L V+L+IDDFGTG SS S Sbjct: 558 QVALALRDSGLEPRLLELELTESLVMEDLDKALQSMKALRAMGVQLSIDDFGTGYSSLSA 617 Query: 429 LETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRH 488 L+ LKID+SF I D + + IIALG LN++++AEGVET++Q ++LR H Sbjct: 618 LKRFPIARLKIDQSFVRDIPGDEEDKAIAKTIIALGHELNLKVIAEGVETEQQLEFLRAH 677 Query: 489 GVHILQGYLYAQPMPLRDFPKWLAGSQPPPARH 521 G +QGYL+++P+P + + A Sbjct: 678 GCDEMQGYLFSRPVPPAELAALVRMRAGEAAAS 710 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 97/400 (24%), Positives = 167/400 (41%), Gaps = 34/400 (8%) Query: 122 DILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQL 181 +L E+ + D +G I P G + G + + L + Sbjct: 1095 QLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDTGEN--GAVHVAEKILESISDQLNLK 1152 Query: 182 PQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYL 241 P + ++ DSL + D YQ + Sbjct: 1153 PYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRN------------------ 1194 Query: 242 PTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVE 301 + ++ M + + L +FEL+ QP A+S IGVE Sbjct: 1195 ---------VYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVE 1245 Query: 302 ILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQ--FHVGINV 359 L+RWN+P G +SP FIP+AE+ I+ + +V+ IRQ ++ + V +N+ Sbjct: 1246 ALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNL 1305 Query: 360 APSHFRRGVLIKDLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAI 416 + FR L K + + + L LE+TE A+ + + I +L +K++I Sbjct: 1306 SAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSI 1365 Query: 417 DDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGV 476 DDFGTG SS S+L+ + LKID+SF + D+ + ++ + II+L + L ++ +AEGV Sbjct: 1366 DDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGV 1425 Query: 477 ETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQP 516 ETQ Q +L+ +QG+ Y++ + F + Sbjct: 1426 ETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFYEKQSQ 1465 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 19/340 (5%) Query: 196 LLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVL----- 250 + N L+D L QP EN ++ +I + L A+ Sbjct: 421 IDMANRLLDELSQPITLENQELHITA---SIGIALAPEHGKDAATLLRHADTALYRAKDA 477 Query: 251 ---LSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWN 307 + + R++ + L +++ L QP ++ Q+ +GVE+LLRW+ Sbjct: 478 GKNTFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWH 537 Query: 308 NPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFR 365 +P G +SP FIP+AEE LI+P+ R+V+ RQ + + HV +N++ F Sbjct: 538 HPELGQVSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAHQFN 597 Query: 366 RGVLIKDLNQYW-FSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTG 422 L L S ++L LE+TE + + I EL V+L+IDDFGTG Sbjct: 598 DPGLTHHLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDFGTG 657 Query: 423 NSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQA 482 SS + L+ D LKID++F + I +DA + +T+ IIA+ ++L++ +VAEGVET +Q Sbjct: 658 YSSLAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETADQR 717 Query: 483 KYLRRHGVHILQGYLYAQPMPLRD---FPKWLAGSQPPPA 519 +L R G ++QGY Y+ P+ F + PP A Sbjct: 718 DFLARCGSELIQGYFYSPPLAAEALHSFSRMFDSDAPPVA 757 >UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT96_SHESA Length = 519 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 146/490 (29%), Positives = 215/490 (43%), Gaps = 19/490 (3%) Query: 33 VRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAK 92 + L + + +E L+ +L E + L C +R + Sbjct: 40 FSYFIAVYLAHNKATEIGEFNLERLEAILKLSDQIGEYAMNLTEEDCGKLTEYMRFR--- 96 Query: 93 LQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQW 152 R + L D + YCSS G N+P+ +L + + G P +I Sbjct: 97 -PYFRGVLLFNDKSFYCSSTTGDLNLPLNTLLPVDRLKDGSQHIVPETPARPGVPAIITT 155 Query: 153 TPAAGSSNAGVMEMINIDLLTAMLLEPQ--LPQISSASLTVDKRHLLYGNGLV-DSLPQP 209 + G + + L ++P + + L + L + + Sbjct: 156 FKNEQT-QYGAVVVFEGQYLIDSFIQPDVFPRAVKTVVLGLHGATLPAAPQFSGNEVITV 214 Query: 210 EDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSF 269 + ++V Q F + ++ W LPL L +L + W R S Sbjct: 215 FAGDKFEVH-QDFVILLEISKALFWHFYWIAFGLLLPLIFTLFVLSSLLFWKR-NGRHSL 272 Query: 270 SREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLI 329 + +I G+ EF L QP++++ + GVE L+RW +P+ G + PD+FIPIAEE LI Sbjct: 273 ADDIKSGIENQEFFLVYQPVVSSEDGKAKGVEALVRWQHPQMGLVRPDLFIPIAEESQLI 332 Query: 330 VPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLN----QYWFSAHPIQQ 385 VPLT Y+ + ++S F +G NVAP HF + + + Sbjct: 333 VPLTNYIFERALADFRQLQLTSDFRIGFNVAPEHFIQSDIEAKFRYLRDAFAEIGVQP-- 390 Query: 386 LILEITERDALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFT 444 ++EITER L D+ RIA L + +AIDDFGTG ++ S L+T D LKIDK F Sbjct: 391 -LIEITERQLLTVDMCERIA-ALRELGILVAIDDFGTGQTTLSLLQTFTLDYLKIDKCFI 448 Query: 445 AAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPL 504 IG D+V S V D II L ++N VAEGVETQEQA YL VH LQGYLYA+PM L Sbjct: 449 DTIGQDSVTSHVLDTIIELCHKMNYVAVAEGVETQEQADYLISRDVHFLQGYLYAKPMKL 508 Query: 505 RDFPKWLAGS 514 + WL Sbjct: 509 NELELWLKEH 518 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 92/260 (35%), Positives = 139/260 (53%), Gaps = 5/260 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 R E+ LA+ +FELF QP ++ RS Q + VE L+RWN+P G ++P FIP Sbjct: 635 RAHERFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVGFIP 694 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-F 378 AEE LIVP+ +V+ E RQ + V +NV+ F L++ + Sbjct: 695 TAEETGLIVPIGDWVLHEACRQNKAWQDLGLEPITVSVNVSARQFSEKNLVERVVHALSE 754 Query: 379 SAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 S L LE+TE + DV + +L V+++IDDFGTG SS S L+T Sbjct: 755 SDLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTFPIAR 814 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKIDKSF + ++ + V +I+LGQ+L + ++AEGVET EQ +LR++ +QGY Sbjct: 815 LKIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQGY 874 Query: 497 LYAQPMPLRDFPKWLAGSQP 516 +++P+ R+ + L Sbjct: 875 HFSKPVCSREIERLLESRSR 894 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 412 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 90/332 (27%), Positives = 153/332 (46%), Gaps = 17/332 (5%) Query: 198 YGNGLVDSLPQPEDNENYQVSSQRFP--FTINVNGPGATALAWHYLPTQLPLAVLLSL-- 253 L+ N+ Y ++SQ + +I V AL+ L Q +A+ S Sbjct: 683 TKAELIGEKILAALNQVYPLASQEYHGAASIGVTLFAGHALSIDELMKQADIAMYQSKKS 742 Query: 254 ------LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWN 307 R E+ + + + L Q LN+ + E L+RW Sbjct: 743 GRNTLRFFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQLNSV-GTPLSAEALIRWV 801 Query: 308 NPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS---QFHVGINVAPSHF 364 +P +G ISP FIP+AE+ LI+P+ ++V+ Q H + + +NV+ F Sbjct: 802 HPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVSAKQF 861 Query: 365 RRGVLIKDLNQ-YWFSAHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGT 421 + + + + A + L LE+TE + +++ I L ++ ++DDFGT Sbjct: 862 HQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLDDFGT 921 Query: 422 GNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQ 481 G SS +L+ L + LKID+SF + S + + + I+A+ + LN+ ++AEGVET+EQ Sbjct: 922 GYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQ 981 Query: 482 AKYLRRHGVHILQGYLYAQPMPLRDFPKWLAG 513 L+ G + QGYL+ +PMP+ LA Sbjct: 982 HTLLQDIGCNYYQGYLFGKPMPIEQLDAILAR 1013 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 412 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 141/261 (54%), Gaps = 5/261 (1%) Query: 261 LATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFI 320 + R+S ++ L Q E L QP ++ RS + +GVE LLRW +P++GWI+P FI Sbjct: 585 IRARERLSLEADLRRALQQGELALHYQPQVDLRSGRIVGVEALLRWRHPQRGWIAPGAFI 644 Query: 321 PIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYWF 378 P+AEE LI+ L +V+ Q + + +N++ G L+ + + Sbjct: 645 PLAEECGLIIELGDWVLRAACEQIRHWSDAGVAPRQTAVNISAVQISSGGLLDTVRRTLA 704 Query: 379 -SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRPD 435 + +L LEITE + + + + +L V+L+IDDFGTG SS ++L+ L Sbjct: 705 ATGIAPDRLELEITESFVMFERERSFKLLADLRALGVQLSIDDFGTGYSSLAYLQQLEVH 764 Query: 436 VLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQG 495 LKID SF + + N+++ +IA+G L +E++AEGVE EQA +L ++QG Sbjct: 765 KLKIDISFVRNMTRNRGNASIVKAVIAMGHSLGLEVIAEGVEEIEQAAHLLALQCDVMQG 824 Query: 496 YLYAQPMPLRDFPKWLAGSQP 516 YL ++P+P+ D + L +P Sbjct: 825 YLVSKPLPVDDITRLLESFEP 845 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 412 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 97/347 (27%), Positives = 163/347 (46%), Gaps = 34/347 (9%) Query: 181 LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY 240 ++L++ VD L + D YQ + T P A Sbjct: 539 DGGQHYSTLSIGVTLFGEQRLSVDELLKRADLALYQAKAAGRN-TQRFFDPDMQA----- 592 Query: 241 LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV 300 A R + ++ GLA+ E ++ QP+++ + +G Sbjct: 593 ---------------------AVNARSNLEADLRQGLARAELLVYYQPVVD-HQARLMGA 630 Query: 301 EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHVGI 357 E L+RW +P++G I P FIP+AE+ LI+PL +YV+ Q + P ++ + + Sbjct: 631 EALVRWRHPQRGMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISV 690 Query: 358 NVAPSHFRRGVLIKDLNQYWFS-AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKL 414 NV+ FR+ + + S ++L LE+TE L D++ I +L + V Sbjct: 691 NVSARQFRQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGF 750 Query: 415 AIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAE 474 A+DDFGTG SS S+L+ L D +KID+SF + +D ++ + I+AL + L++++VAE Sbjct: 751 ALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAE 810 Query: 475 GVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARH 521 GVET Q +L+ HG QGYL+ +P+P+ F + P + Sbjct: 811 GVETTGQLSFLQLHGCEGFQGYLFGRPVPMEVFACAHRPGKMPQPQA 857 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 160/351 (45%), Gaps = 37/351 (10%) Query: 169 IDLLTAMLLEP--QLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTI 226 + A + P Q +L+V D L + D Y+ + T+ Sbjct: 720 GQTILAAIRAPFDIDGQQHHTALSVGIAIFRGVRESADELLKRSDLAMYEAKAAGRD-TL 778 Query: 227 NVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFC 286 P A A + R + ++ GL + ELF Sbjct: 779 RFFDPQMQA--------------------------AVSERAALEADLRAGLDAGQLELFY 812 Query: 287 QPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHV 346 QP ++ + G E L+RW +P +G+ISP FIP+AEE LI+ + +VM Q Sbjct: 813 QPKVD--QGRITGAEALVRWRHPDRGFISPAEFIPLAEESGLILRVGEWVMRSACAQLAQ 870 Query: 347 F---PMSSQFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYR 402 + P+ + V +NV+P F G + + + S ++L LE+TE L DV+ Sbjct: 871 WSAHPVLGELTVAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEGMLLQDVEDT 930 Query: 403 IAR--ELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDII 460 IA+ +L V ++DDFGTG SS ++L+ L LKIDKSF + +D ++ + I Sbjct: 931 IAKMVQLRGYGVGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTI 990 Query: 461 IALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 +ALG L + +VAEGVET+ Q +L R+G H QGYL + P+ F + Sbjct: 991 VALGTSLGLRVVAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAAAFEALV 1041 >UniRef50_Q0KC83 Predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains n=3 Tax=cellular organisms RepID=Q0KC83_RALEH Length = 1124 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 96/322 (29%), Positives = 144/322 (44%), Gaps = 18/322 (5%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLS--------LLVGYIAWLATAYRMSFSREINLG 276 +I ++ W L LA+ + + R+ ++ Sbjct: 806 SIGISSFPEDGSDWQTLLKHADLAMYGAKQLGKNGYQFYCRGMSASLQRRIDMESHLHRA 865 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L Q EF L+ QP + S C VE L+RW +P G + P FIP AE+ IV + + Sbjct: 866 LEQDEFILYYQPRIALASGACTAVEALIRWRHPELGLVMPGDFIPFAEQSGAIVEIGAWA 925 Query: 337 MAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITER 393 + E RQ + V +N++ F L + + P L LE+TE Sbjct: 926 LREACRQNAAWRAQGLPPVRVSVNLSARQFADKSLRLTIIDALRQAGLPGNLLELELTES 985 Query: 394 DALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDA 451 + D + L R V+LAIDDFGTG SS ++L D +KID SF I Sbjct: 986 MVMRDAEQASSWLSRLKRTGVRLAIDDFGTGYSSLAYLSRFPIDTVKIDGSFVRYIPESR 1045 Query: 452 VNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWL 511 ++ +T +I LG RL +E+VAEGVE + Q ++LRR G +QGY ++ P+P +L Sbjct: 1046 SDTQITSAVIGLGHRLGLEVVAEGVENEVQLEFLRREGCDEVQGYYFSHPLPPAKITAFL 1105 Query: 512 AGS-QPPPARHNGHITPIMPLR 532 A + PA +G P+R Sbjct: 1106 ASRMENGPALEHGP----QPMR 1123 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 111/427 (25%), Positives = 179/427 (41%), Gaps = 33/427 (7%) Query: 117 NVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAML 176 + D L LP L + D AL G + + V + + + L Sbjct: 294 HQATHDELTGLPNRMGLRQRMEDHALKGGPDARLAVLYLDMDNFKTVNDSL-GHAVGDEL 352 Query: 177 LEPQLPQISSASLTVDKRHLLYGNGLVD--SLPQPEDNENYQVSSQR------FPF---- 224 L ++ + D L G+ V L D E + S R PF Sbjct: 353 LRAVAGRLVGMAPRRDMVARLGGDEFVVLLPLSAEGDGELAETESARIQDSFTRPFNAAD 412 Query: 225 -------TINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLA--------TAYRMSF 269 +I ++ L +A+ + G + R++ Sbjct: 413 HELYVMPSIGISVAPEDGRDPATLLKNAEIAMYRAKEQGGARFRRFTQAMNDDVTRRLAI 472 Query: 270 SREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLI 329 + I GL EF +F QP ++ + Q G+E L+RW P + P FIP+AE+ L+ Sbjct: 473 EKSIRKGLENDEFVVFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLEFIPVAEDTGLV 532 Query: 330 VPLTRYVMAETIRQRHVFPMS-SQFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLI 387 V L V+ + Q + + +N++ F + L+ + S P QL Sbjct: 533 VALGERVLRDACIQTRRWTDELGPLRIAVNISARQF-QPDLLDRVQAALAESGLPPSQLE 591 Query: 388 LEITERDALLD--VDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTA 445 LEITE + D I L + + +AIDDFGTG+SS +L+ D +KID+SF Sbjct: 592 LEITETTMMRDLPTSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVR 651 Query: 446 AIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLR 505 + D ++T+ I+ +G+ L++ +VAEGVET +Q +LR HG +QGY Y++P+P Sbjct: 652 DVPGDEGDATIVSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSKPLPAD 711 Query: 506 DFPKWLA 512 F W+ Sbjct: 712 GFADWMR 718 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 6/266 (2%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 + +++ S ++ L + E L QP ++ + IGVE LLRW +P+ G I PD Sbjct: 358 MHATSMEQLTLSNDLRYALERGELHLCYQPQVSFETGGLIGVEALLRWIHPKLGMIPPDR 417 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQY 376 FIP+AE+ LIVP+ +V+ E RQ ++ V +N++ FR + Sbjct: 418 FIPLAEDTGLIVPIGTWVLHEACRQAMMWVAQGLPSLRVAVNISAKQFRESDFSDTVKAV 477 Query: 377 WF-SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLR 433 + L LE+TE + +V + L V LAIDDFGTG SS S+L+ Sbjct: 478 LQTTGLAPNLLELELTEGMLIENVTQTKLTLQSLKDMGVTLAIDDFGTGYSSLSYLKHFP 537 Query: 434 PDVLKIDKSFTAAIGSDAVN-STVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D LKIDKSF I + + + + + ++ALG L + ++AEGVE Q+Q +L Sbjct: 538 LDRLKIDKSFVKEIAEKSGDAAAIVEAVVALGHSLKLTVIAEGVEQQDQVDFLHNRKCDE 597 Query: 493 LQGYLYAQPMPLRDFPKWLAGSQPPP 518 LQGY +++P+ + + L P Sbjct: 598 LQGYFFSRPLTPQALEELLRKGVNGP 623 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 142/269 (52%), Gaps = 5/269 (1%) Query: 266 RMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEE 325 ++ ++ + ++EF L QP + + + IGVE L+RW +P G +SP +FIP+AEE Sbjct: 603 KLILEADLRKAIERNEFVLHYQPQIELATGKLIGVEALIRWQHPCLGMVSPALFIPLAEE 662 Query: 326 HHLIVPLTRYVMAETIRQRHVFPMSS--QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHP 382 LI P+ + + Q ++ + + + +N++ ++ ++ + + + Sbjct: 663 TGLICPIGEWALKTACHQYQIWQQAGLPKIQMAVNLSAFQLQQYDIVARIAKIIQETRIN 722 Query: 383 IQQLILEITERDALLDVDY--RIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 + L LEITE + +++ I +L + +K+AIDDFGTG SS + L+ L + LKID Sbjct: 723 PRDLELEITETTVIQNLERMTSIIEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVNTLKID 782 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 KSF + +D ++ + II LG+ +E++AEGVET +Q ++L+ G QG+L ++ Sbjct: 783 KSFVQDLSNDPNDAKLCQAIIMLGKAFKLEVLAEGVETIKQLEFLKNCGCDHAQGFLISR 842 Query: 501 PMPLRDFPKWLAGSQPPPARHNGHITPIM 529 P+P L +Q + P Sbjct: 843 PVPPDALLGSLLHAQLCGTSSVPQLIPSP 871 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 13/307 (4%) Query: 225 TINVNGPGATALAWHYLPTQLPLAVLLSL--------LVGYIAWLATAYRMSFSREINLG 276 +I V L +A+ + + A R + +++ Sbjct: 622 SIGVTLFRDHEENLEQLLKWTDMAMYHAKDAGRNVIRFFDPVMQTAIENRAALENDLHTA 681 Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 L + +FELF Q ++ R + G E+LLRW +P++G +SP FIP+AE+ LIVP+ +V Sbjct: 682 LEERQFELFYQIQVD-RDGRAEGAEVLLRWRHPQRGLVSPAQFIPLAEDTGLIVPIGEWV 740 Query: 337 MAETIRQRHVFP-MSSQFHVGINVAPSHFRRGVLIKDLNQYWFSA-HPIQQLILEITERD 394 + Q + + +NV+ FR+ ++ + Q L LE+TE Sbjct: 741 LDTVCAQIAKWQGEQRNLVIAVNVSAKQFRQSNFVELVQQIIQRHQVSPALLKLELTESL 800 Query: 395 ALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAV 452 L ++ I + L V ++DDFGTG SS S+L+ L D +KID+SF I +D Sbjct: 801 VLDNIQDTIDKMKVLKAFGVSFSMDDFGTGYSSLSYLKQLPLDQIKIDQSFVRDIATDKT 860 Query: 453 NSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512 + + I+ LG ++++AEGVE++ Q L++ G QGYL+++P+P+ F + Sbjct: 861 DLVMVKTIVDLGVNFEMDVIAEGVESEVQLGLLKQCGCSRFQGYLFSKPVPVEAFELLIK 920 Query: 513 GSQPPPA 519 G A Sbjct: 921 GDTVGQA 927 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 84/244 (34%), Positives = 134/244 (54%), Gaps = 7/244 (2%) Query: 277 LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYV 336 + +++ L+ Q +++ S + +G E+LLRW +P +G +SP FIP+AEE IVP+ +V Sbjct: 485 VERNQLRLYYQVQMDS-SNRPLGAEVLLRWQHPERGLVSPAQFIPMAEETGHIVPIGLWV 543 Query: 337 MAETIRQRHVFPMSS---QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHPIQQLILEITE 392 + Q V+ + +NV+ FR + + + S L LE+TE Sbjct: 544 LQTACTQLKVWQSDPLTCDLTLAVNVSAKQFRSMDFVSQVQRTLAQSGAKPSLLKLELTE 603 Query: 393 RDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD 450 L +V+ I REL V ++DDFGTG SS +L+ L D +KID+SF I SD Sbjct: 604 SLVLENVEDTIAKMRELKLLGVSFSMDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASD 663 Query: 451 AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 + ++ + IIA+ + L + ++AEGVET+ Q ++L G H QGYL+ +P PL +F Sbjct: 664 SNDAAIVQTIIAMSEVLGLNVIAEGVETEAQREFLDLRGCHAFQGYLFGRPAPLAEFEAI 723 Query: 511 LAGS 514 L + Sbjct: 724 LRKA 727 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 129/260 (49%), Gaps = 6/260 (2%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R+ + L + E ++ QP + S + IG E LLRW +P G ISP+ FIP+ Sbjct: 661 AGRRLQLENNLRKALQRQEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPL 720 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPM-SSQFHVGINVAPSHFRRGVLIKDLNQYW-FSA 380 AEE +I + + + + +Q + + + +N++ FR L+ D+ Q + Sbjct: 721 AEETGVIEEIGAWALEQACQQTVAWQKNHPELKIAVNLSARQFRNENLVDDIEQILNKTG 780 Query: 381 HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLK 438 + L +E+TE + DVD I L + + LAIDDFGTG SS S L D LK Sbjct: 781 LAARHLEMELTESLLMEDVDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLK 840 Query: 439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLY 498 ID+SF ++ D + II LG+ L + ++AEGVE EQ + L + G QGY + Sbjct: 841 IDRSFVNSMSLDNNG--IARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYF 898 Query: 499 AQPMPLRDFPKWLAGSQPPP 518 ++P+ F + L P Sbjct: 899 SRPVHDNAFSEMLEKPTILP 918 >UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae RepID=A4TND3_YERPP Length = 490 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 130/477 (27%), Positives = 232/477 (48%), Gaps = 8/477 (1%) Query: 39 RNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRS 98 ++ ++ + + + L + L+PL C A L +AA VR+ Sbjct: 5 YRSSENKLTTQSGNIITYASHFLNEITTTMSQLIPLSTQSCEQASPTLHYRAAFTNGVRA 64 Query: 99 IGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPL-LRLTIDRALIKGSPVLIQWTPAAG 157 LV++G YCSS G + PV I ++ QPL ++ ++ P + W AG Sbjct: 65 FLLVREGVAYCSSATGEMHTPVSTIYPKVNLSQPLDFKIQQGTPMMPNKPAIAVWLRQAG 124 Query: 158 SSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQV 217 + G++ + L +L+ ++S +++ +D + + V + Q + ++ Sbjct: 125 RGDTGILATMEFSLHPYLLMGRSDNEMSGSAIIIDGLAITTFDSNVLPISQLPNLNAREI 184 Query: 218 SSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGL 277 + +P I + T L L ++ Y + + S EI G+ Sbjct: 185 TLPGYPIKILIYHNSITKNDIRMTLLGGLLLAGLVGILAYYILIT---KKSAEAEILRGI 241 Query: 278 AQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVM 337 + EF + QP+ + +Q G+E L+RW +P +G ISPD+FIP AE HLI PLT ++ Sbjct: 242 RRGEFFVEYQPVFRSHNQTISGLEALIRWQHPTEGRISPDIFIPYAETQHLIQPLTTHLF 301 Query: 338 AETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYWFS-AHPIQQLILEITERD 394 IR + + + N++P+H +D+++ I + EITER Sbjct: 302 ELIIRDTALMVNLFPTGAKLAFNISPAHLADDDFCQDVSRLLQQLNTDIFTPVFEITERG 361 Query: 395 ALL-DVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVN 453 + ++ + LH + +++A+DDFGTG+S+ +LE D +KID+ F + IG + V Sbjct: 362 MVQKELALKQFAWLHSQGIQIAVDDFGTGHSALIYLERFTLDYIKIDRGFISTIGENTVT 421 Query: 454 STVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKW 510 + V D ++ L ++LNIE +AEG+ET++Q YL +HGV+ LQGYL ++P+ + K+ Sbjct: 422 TPVLDSVLILAKKLNIETIAEGIETEQQLHYLAKHGVNYLQGYLLSKPLSVEALAKF 478 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 7/255 (2%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 + + +I L ++EF L+ QP + Q G E L+RW +P+QG ISP Sbjct: 651 MQAKVLEHAAMANDIRHALTRNEFTLYYQPQV-THDGQLTGAEALIRWQHPKQGTISPIE 709 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS---QFHVGINVAPSHFRRGVLIKDLNQ 375 FIPIAEE LI+PL +V+ + + V+ S + IN++ F + ++ + + Sbjct: 710 FIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLE 769 Query: 376 YWFSA-HPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETL 432 +L LE+TE D++ I +L + V ++DDFGTG SS ++L+ L Sbjct: 770 ALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRL 829 Query: 433 RPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHI 492 D LKIDKSF + +++ ++ + I++L + +N+ ++AEGVETQEQ L +G Sbjct: 830 PLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLD 889 Query: 493 LQGYLYAQPMPLRDF 507 QGYL+++P+PL F Sbjct: 890 FQGYLFSRPVPLEAF 904 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 92/341 (26%), Positives = 150/341 (43%), Gaps = 34/341 (9%) Query: 179 PQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAW 238 ++ ++ + L + D YQ + T+ P A+ Sbjct: 856 SLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRN-TLRFFDPEMQAV-- 912 Query: 239 HYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCI 298 R + + + EF L+ Q ++ + Sbjct: 913 ------------------------VTSRAALEAGLRRAVTSDEFLLYYQAQVDGQ-GHLT 947 Query: 299 GVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF---PMSSQFHV 355 G E LLRW +P +G ++P FI +AE+ LI+PL R+V+ Q + P + V Sbjct: 948 GCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTV 1007 Query: 356 GINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYRIARE--LHRKNV 412 +NV+ F + + + + Q+L LE+TE + DV+ IA+ L K V Sbjct: 1008 AVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGV 1067 Query: 413 KLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELV 472 ++DDFGTG SS S+L+ L D LKID+ F I D ++ + ++IALG L + ++ Sbjct: 1068 GFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVI 1127 Query: 473 AEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAG 513 AEGVE + Q +L R G H QGYL+ +P+PL F ++ Sbjct: 1128 AEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFEAFVRR 1168 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 135/258 (52%), Gaps = 5/258 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 ++ +E+ L EF L QP +N + + + VE L+RW++P +G + PD FI + Sbjct: 375 ALKQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISV 434 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPM--SSQFHVGINVAPSHFRRGVLIKDLNQYW-FS 379 AEE LI P+ R+V+ Q + S + +N++ F L + + + + Sbjct: 435 AEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNET 494 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L LE+TE + D+ + L + V LAIDDFG+G SS S+L+ L + L Sbjct: 495 GLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNAL 554 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 K+D+ F I D+ + +T IIA+ +L +++VAEGVET EQ +YL + QGY Sbjct: 555 KVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYF 614 Query: 498 YAQPMPLRDFPKWLAGSQ 515 +++P+ D +L + Sbjct: 615 FSKPLSFEDLYIYLNEHK 632 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 92/257 (35%), Positives = 139/257 (54%), Gaps = 5/257 (1%) Query: 262 ATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIP 321 A + F + L ++EF L QP ++ S + +G+E+LLRW++P G +SP FIP Sbjct: 1251 AAFEYVLFENALRGALKRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIP 1310 Query: 322 IAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QF-HVGINVAPSHFRRGVLIKDLNQYWFS 379 IAE+ LI + +V+ Q + F H+ +NVA ++ + + S Sbjct: 1311 IAEQSGLIQEIGTWVLYRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDS 1370 Query: 380 -AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDV 436 P L LE+TE + + RI L + LAIDDFGTG SS S+L+ L + Sbjct: 1371 SGLPSPHLELELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINK 1430 Query: 437 LKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGY 496 LKIDKSF I D + +++ +IALG+ LN+ ++AEGVE + QA +LR G H QGY Sbjct: 1431 LKIDKSFVRDIPHDTNDMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGY 1490 Query: 497 LYAQPMPLRDFPKWLAG 513 LY++P+P + + A Sbjct: 1491 LYSKPLPPEEITQLFAE 1507 >UniRef50_Q3JAB6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JAB6_NITOC Length = 700 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 132/263 (50%), Gaps = 5/263 (1%) Query: 259 AWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDV 318 + + ++ +++ L + EF L+ QP L+ + Q VE L+RW +P +G +SP Sbjct: 439 MNVRGSELLALETDLHRALEREEFVLYYQPQLDVTTGQITAVEALIRWQHPNRGLVSPRD 498 Query: 319 FIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSS-QFHVGINVAPSHFRRGVLIKDLNQYW 377 FIP+ E+ LI + ++ + RQ + + +N + F++ + ++Q Sbjct: 499 FIPLLEQTGLIEEVGKWGLNTACRQAKAWHSQGYPIRMAVNCSARQFQQ-HFLDIVHQIL 557 Query: 378 F-SAHPIQQLILEITERDALLDVDYR--IARELHRKNVKLAIDDFGTGNSSFSWLETLRP 434 + L LE+TE + D I + L V LAIDDFGTG SS ++L+ Sbjct: 558 QKQSLDPAYLELEVTESVVMQDTQSATYILQRLKEMGVTLAIDDFGTGYSSLAYLKRFPI 617 Query: 435 DVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQ 494 LKID SF + + ++ + + I+ LG L +E+VAEGVET+ Q ++ + H +Q Sbjct: 618 HSLKIDCSFVRDVTKNEEDAAIAETILLLGNSLGLEVVAEGVETEAQMRFFQDRHCHRIQ 677 Query: 495 GYLYAQPMPLRDFPKWLAGSQPP 517 GY +PMP +D + G P Sbjct: 678 GYWIGRPMPAKDLFPLITGRNNP 700 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 97/359 (27%), Positives = 156/359 (43%), Gaps = 42/359 (11%) Query: 176 LLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATA 235 L +S ++ D L + D+ YQ + T+ A Sbjct: 815 LSYMLQGYEYHSSPSIGVALFCADASSPDELLKRADSAMYQSKAAGRN-TVRFYDERTQA 873 Query: 236 LAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQ 295 L R ++ L Q + L+ Q +N Sbjct: 874 LL--------------------------LARAELEHALHHALEQQQLMLYYQVQVN-ADY 906 Query: 296 QCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS---SQ 352 Q +G E+LLRW +P G ISP FIP+AEE +I+P+ +V+ + Q + Sbjct: 907 QPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASDVFKCD 966 Query: 353 FHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYRI--ARELHR 409 + +NV+ F + + S +L LEITE + DV+ I ++L + Sbjct: 967 LVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENIIATMQQLKK 1026 Query: 410 KNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNI 469 + ++DDFGTG SS S ++ L D LKID+SF IG D + + IIA+ Q + + Sbjct: 1027 IGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQSMKL 1086 Query: 470 ELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPI 528 ++AEG+ET++Q + L G QGYL+++P+PL DF L+ + G +TP+ Sbjct: 1087 NIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSDFEGLLSRA--------GGLTPV 1137 >UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNC8_CLOCL Length = 584 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 79/254 (31%), Positives = 138/254 (54%), Gaps = 5/254 (1%) Query: 263 TAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPI 322 R ++ + + +F L QP ++ + + +GVE L+RW++P+ G ISP FIPI Sbjct: 327 VNRRTILENDLMTAIEKGQFFLVYQPQVSLNTGKMVGVEALIRWSHPKLGLISPFEFIPI 386 Query: 323 AEEHHLIVPLTRYVMAETIRQRHVFPMS--SQFHVGINVAPSHFRRGVLIKDLNQYWFS- 379 EE LI + +V+ + Q + F V +N++ ++ + K + Sbjct: 387 VEESGLIDSIGEWVIRTSCIQAKEWRDKKLPFFKVAVNISSIQLKKMNICKIIKDILKEL 446 Query: 380 AHPIQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVL 437 + L +E+TE + D++ I REL+ +K+AIDDFGTG SS ++L D L Sbjct: 447 SLDPNVLEVELTESAMMEDIELAIENFRELNNMGIKIAIDDFGTGYSSLNYLRKFSIDKL 506 Query: 438 KIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYL 497 KID+SF +G D ++ +T II + + L+ +++AEGVET+E KYL +G +QGY Sbjct: 507 KIDRSFVTELGDDFESTIITKTIIDMAKNLSFKVIAEGVETKEHLKYLMENGCDEVQGYY 566 Query: 498 YAQPMPLRDFPKWL 511 +++P+ + +++ Sbjct: 567 FSKPITAEEVEEFV 580 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 94/367 (25%), Positives = 152/367 (41%), Gaps = 19/367 (5%) Query: 172 LTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGP 231 + L Q A + +K L + + S ++ Sbjct: 377 MLEELGSEQEGAAVQAEIVAEKIRLELARPYLLNGDTE------YFRSASIGISLFFGQE 430 Query: 232 GATALAWHYLPTQLPLAVLLSL----LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQ 287 + L A R + L + EF L+ Q Sbjct: 431 KTIDILLKQADIALYKAKDAGRNAIRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQ 490 Query: 288 PLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVF 347 P ++A ++ IG E LLRW P + ++P+ FIP+AEE LIVP+ +V+ + + + Sbjct: 491 PQVDAV-RRLIGAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRW 549 Query: 348 PMSS---QFHVGINVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDYRI 403 + +NV+ FR+ + + + L LE+TE L +V+ I Sbjct: 550 ADDPRSASLFLSVNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLDNVEEVI 609 Query: 404 --ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIII 461 + L V+ ++DDFGTG +S S+L+ + LK+D+SF I + ++ + II Sbjct: 610 EKMQALRTIGVRFSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAII 669 Query: 462 ALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARH 521 A+G L + +VAEGVE Q YL +H + QGYL+ +PM DF L PP R Sbjct: 670 AMGNTLRLSVVAEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDDFRASL--GSEPPPRA 727 Query: 522 NGHITPI 528 + I P Sbjct: 728 DPAIEPA 734 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 96/355 (27%), Positives = 154/355 (43%), Gaps = 17/355 (4%) Query: 189 LTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPF----TINVNGPGATALAWHYLPTQ 244 + + L NG + + Q ++ V+ L + Sbjct: 362 FAIVQTGLDDSNGATRLAARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKK 421 Query: 245 LPLAVLLSL--------LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQ 296 +A+ + R + ++ L EFELF QPL + ++ Sbjct: 422 ADMALYRAKADGRGAYHFFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDER 481 Query: 297 CIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVG 356 G E LLRW +P +G +SP FIP+AEE LIV L +V+ + +P + Sbjct: 482 VTGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWPE--HVRLA 539 Query: 357 INVAPSHFRRGVLIKDLNQYWF-SAHPIQQLILEITERDALLDVDY--RIARELHRKNVK 413 +N++P+ FR L++ + S P Q+L LEITE L D + +L V+ Sbjct: 540 VNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVR 599 Query: 414 LAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVA 473 +++DDFGTG SS S+L + D +KID++F I D+ + ++ LG + + A Sbjct: 600 ISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTA 659 Query: 474 EGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPI 528 EGVETQ Q LR+ G +QGY ++P P + K L ++PI Sbjct: 660 EGVETQAQLDALRQQGCAEIQGYFISRPAPASEIAKMLGVEGRADLGAPSVLSPI 714 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 97/377 (25%), Positives = 166/377 (44%), Gaps = 35/377 (9%) Query: 148 VLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQ-ISSASLTVDKRHLLYGNGLVDSL 206 V+++ + + E + ++ A+ L S++ +V +D Sbjct: 428 VMLEGLSKDVAEASTQAEAVAGKVMQALNQPYDLGTLTRSSTPSVGITVFGKQQESLDEP 487 Query: 207 PQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYR 266 + D YQ + + + P A A R Sbjct: 488 LKRADLAMYQAKAAGRNTS-RLFDPKTQA--------------------------AVTLR 520 Query: 267 MSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEH 326 + L + +F L+ QP ++ + G E L+RW +P +G + P FI +AE+ Sbjct: 521 ADLEAALRTALEEEQFVLYLQPQIS-EDVRVTGAEALIRWQHPTRGLVMPGEFIAVAEDC 579 Query: 327 HLIVPLTRYVMAETIRQRHVFPMSS---QFHVGINVAPSHFRRGVLIKDLNQYW-FSAHP 382 +IVP+ +V+ +Q ++ + +NV+ F + ++ + Sbjct: 580 GMIVPIGNWVLNTACKQLALWATQPAFAHMTIAVNVSAKQFHQHDFVEQVLDALSRHGAQ 639 Query: 383 IQQLILEITERDALLDVDYRI--ARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKID 440 L +EITE + +VD I EL V A+DDFGTG SS ++L+ L DVLKID Sbjct: 640 ASGLKIEITESMLIANVDDVIVRMEELQHHGVGFAMDDFGTGYSSLTYLKRLPLDVLKID 699 Query: 441 KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ 500 +SF + D ++ + ++I+AL + + ++AEGVET EQ +YL RHG H QGYL+++ Sbjct: 700 QSFVRDVLVDTNDAAIANMIVALANSMGLSVIAEGVETVEQMQYLARHGCHAYQGYLFSR 759 Query: 501 PMPLRDFPKWLAGSQPP 517 P+P+ F LA P Sbjct: 760 PVPVERFETSLADFLRP 776 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.167 0.585 Lambda K H 0.267 0.0512 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,744,221,979 Number of Sequences: 3077464 Number of extensions: 238632229 Number of successful extensions: 540905 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 12129 Number of HSP's successfully gapped in prelim test: 823 Number of HSP's that attempted gapping in prelim test: 495260 Number of HSP's gapped (non-prelim): 15607 length of query: 532 length of database: 1,040,396,356 effective HSP length: 134 effective length of query: 398 effective length of database: 628,016,180 effective search space: 249950439640 effective search space used: 249950439640 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 96 (41.3 bits)