BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (369 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P04816 Leucine-specific-binding protein n=310 Tax=Prote... 755 0.0 UniRef50_Q399U6 ABC branched chain amino acid family transporter... 380 e-104 UniRef50_A1WJ16 Extracellular ligand-binding receptor n=2 Tax=Pr... 369 e-101 UniRef50_Q2RSC4 Extracellular ligand-binding receptor n=1 Tax=Rh... 276 1e-72 UniRef50_A8IDI7 Amino acid ABC transporter substrate binding pro... 275 2e-72 UniRef50_Q2YLF8 Leu/Ile/Val-binding protein homolog 1 n=80 Tax=P... 266 9e-70 UniRef50_Q8G3D4 Leu/Ile/Val-binding protein homolog 3 n=53 Tax=R... 254 3e-66 UniRef50_Q11D26 Extracellular ligand-binding receptor n=3 Tax=Al... 253 6e-66 UniRef50_D0LYK9 Extracellular ligand-binding receptor n=4 Tax=Pr... 252 2e-65 UniRef50_Q985D9 ABC transporter, binding protein n=2 Tax=Mesorhi... 249 9e-65 UniRef50_B6ISN6 Leucine-, isoleucine-, valine-, threonine-, and ... 244 3e-63 UniRef50_Q2YLG0 Leu/Ile/Val-binding protein homolog 2 n=42 Tax=B... 243 7e-63 UniRef50_C7RS11 Extracellular ligand-binding receptor n=1 Tax=Ca... 242 2e-62 UniRef50_Q9AQ31 40kDa leucine-binding transmembrane protein n=3 ... 240 6e-62 UniRef50_B8J0V3 Extracellular ligand-binding receptor n=1 Tax=De... 217 5e-55 UniRef50_B8FN98 Extracellular ligand-binding receptor n=12 Tax=B... 209 2e-52 UniRef50_Q92ZZ6 ABC transporter, periplasmic solute-binding prot... 204 4e-51 UniRef50_Q7NI31 Glr2353 protein n=1 Tax=Gloeobacter violaceus Re... 197 5e-49 UniRef50_B6WPS4 Putative uncharacterized protein n=1 Tax=Desulfo... 196 1e-48 UniRef50_B5WAG3 Extracellular ligand-binding receptor n=2 Tax=Bu... 191 3e-47 UniRef50_B1LX36 Extracellular ligand-binding receptor n=11 Tax=A... 184 3e-45 UniRef50_A4JSR3 Extracellular ligand-binding receptor n=11 Tax=c... 183 1e-44 UniRef50_D1U8G6 Extracellular ligand-binding receptor n=2 Tax=De... 182 1e-44 UniRef50_Q4G268 HmgD n=1 Tax=Pseudomonas putida RepID=Q4G268_PSEPU 181 4e-44 UniRef50_B2JSU3 Extracellular ligand-binding receptor n=2 Tax=Bu... 180 7e-44 UniRef50_C6BVT9 Extracellular ligand-binding receptor n=3 Tax=De... 175 2e-42 UniRef50_A1KBY9 Probable leucine-specific binding protein n=2 Ta... 175 2e-42 UniRef50_Q316T7 Amino acid ABC transporter, periplasmic-binding ... 171 3e-41 UniRef50_A3RVH7 Leucine-, isoleucine-, valine-, threonine-, and ... 169 2e-40 UniRef50_Q47JF2 Extracellular ligand-binding receptor n=142 Tax=... 166 1e-39 UniRef50_Q39AQ6 ABC branched chain amino acid family transporter... 166 1e-39 UniRef50_B2JW90 Extracellular ligand-binding receptor n=1 Tax=Bu... 164 3e-39 UniRef50_Q5SIN9 Branched-chain amino acid ABC transporter, perip... 162 2e-38 UniRef50_B7AA03 Extracellular ligand-binding receptor n=3 Tax=Th... 160 5e-38 UniRef50_Q39HK1 ABC branched chain amino acid family transporter... 160 7e-38 UniRef50_D2AV85 ABC-type branched-chain amino acid transport sys... 155 2e-36 UniRef50_A9BYU2 Extracellular ligand-binding receptor n=2 Tax=Co... 154 4e-36 UniRef50_B8GBD0 Extracellular ligand-binding receptor n=5 Tax=Ch... 154 7e-36 UniRef50_B2T1G8 Extracellular ligand-binding receptor n=1 Tax=Bu... 153 9e-36 UniRef50_D1B6I2 Extracellular ligand-binding receptor n=2 Tax=Sy... 152 2e-35 UniRef50_A6T359 ABC-type branched-chain amino acid transport sys... 149 1e-34 UniRef50_Q141F0 ABC branched chain amino acid family transporter... 149 2e-34 UniRef50_A6LX40 Extracellular ligand-binding receptor n=3 Tax=Cl... 149 2e-34 UniRef50_Q3JSD7 Outative extracellular ligand binding protein n=... 148 4e-34 UniRef50_C0ZKD9 Probable branched-chain amino acid ABC transport... 148 4e-34 UniRef50_Q3A9Y7 High affinity branched-chain amino acid ABC tran... 147 5e-34 UniRef50_D1C9L8 Extracellular ligand-binding receptor n=1 Tax=Sp... 147 6e-34 UniRef50_C7HZL2 Extracellular ligand-binding receptor n=2 Tax=Th... 147 6e-34 UniRef50_B9Z072 Extracellular ligand-binding receptor n=2 Tax=Ch... 147 7e-34 UniRef50_C5CRE7 Extracellular ligand-binding receptor n=27 Tax=B... 147 8e-34 UniRef50_C8SVY2 Extracellular ligand-binding receptor n=1 Tax=Me... 146 1e-33 UniRef50_A9BM94 Extracellular ligand-binding receptor n=15 Tax=C... 144 4e-33 UniRef50_A6WC82 Extracellular ligand-binding receptor n=1 Tax=Ki... 144 4e-33 UniRef50_UPI0001B5404D ABC transporter ligand-binding protein n=... 144 6e-33 UniRef50_A5FVF3 Extracellular ligand-binding receptor n=5 Tax=Ba... 143 1e-32 UniRef50_A4JTH7 Extracellular ligand-binding receptor n=3 Tax=Bu... 143 1e-32 UniRef50_A1TSM1 Extracellular ligand-binding receptor n=2 Tax=Ac... 142 2e-32 UniRef50_Q2T506 Amino acid ABC transporter, periplasmic amino ac... 141 3e-32 UniRef50_A0B322 Extracellular ligand-binding receptor n=3 Tax=Bu... 140 8e-32 UniRef50_Q3JQA3 Periplasmic ligand binding lipoprotein n=74 Tax=... 139 1e-31 UniRef50_C4XSP4 ABC transporter substrate binding protein n=1 Ta... 139 2e-31 UniRef50_D1ALD8 Extracellular ligand-binding receptor n=6 Tax=Fu... 138 3e-31 UniRef50_C9KMT7 Branched-chain amino acid ABC transporter, amino... 137 7e-31 UniRef50_Q1IZ32 ABC-type branched-chain amino acid transport sys... 137 8e-31 UniRef50_A6M3G8 Extracellular ligand-binding receptor n=3 Tax=Cl... 137 8e-31 UniRef50_C6J478 Extracellular ligand-binding receptor n=1 Tax=Pa... 137 8e-31 UniRef50_B9Z602 Extracellular ligand-binding receptor n=1 Tax=Lu... 134 5e-30 UniRef50_C4DI28 Amino acid/amide ABC transporter substrate-bindi... 134 6e-30 UniRef50_A5TY68 Branched chain amino acid ABC superfamily ATP bi... 133 1e-29 UniRef50_C0QMD9 ABC-typ branched-chain amino acid transport syst... 132 3e-29 UniRef50_D2RMU5 Extracellular ligand-binding receptor n=5 Tax=Ve... 131 3e-29 UniRef50_A5CZK0 ABC-type branched-chain amino acid transport sys... 130 8e-29 UniRef50_B0RKF6 Periplasmic component protein n=1 Tax=Herbaspiri... 130 1e-28 UniRef50_A5HYZ7 Branched-chain amino acid transport system,subst... 129 2e-28 UniRef50_A8KXL9 Extracellular ligand-binding receptor n=8 Tax=Fr... 128 3e-28 UniRef50_C6JQZ8 Leucine-, isoleucine-, valine-, threonine-, and ... 128 4e-28 UniRef50_A8U523 Putative ABC transporter, branched chain amino a... 127 5e-28 UniRef50_D2Q320 Extracellular ligand-binding receptor n=19 Tax=A... 127 9e-28 UniRef50_A9IHL6 Putative binding-protein-dependent transport pro... 126 1e-27 UniRef50_B1ZYR7 Extracellular ligand-binding receptor n=3 Tax=Ve... 126 1e-27 UniRef50_C4RKJ8 Extracellular ligand-binding receptor n=2 Tax=Mi... 126 1e-27 UniRef50_B1LSS9 Extracellular ligand-binding receptor n=6 Tax=Me... 125 2e-27 UniRef50_D2L0G3 Extracellular ligand-binding receptor n=1 Tax=De... 125 2e-27 UniRef50_C6J274 Branched-chain amino acid transport system,subst... 125 3e-27 UniRef50_C9R8F6 Extracellular ligand-binding receptor n=1 Tax=Am... 125 3e-27 UniRef50_B4UJL7 Extracellular ligand-binding receptor n=12 Tax=B... 125 3e-27 UniRef50_B9Y8T3 Putative uncharacterized protein n=1 Tax=Holdema... 124 4e-27 UniRef50_B8FZ96 Extracellular ligand-binding receptor n=3 Tax=ce... 124 4e-27 UniRef50_C0CMD4 Putative uncharacterized protein n=1 Tax=Blautia... 124 4e-27 UniRef50_B5YDP1 Branched chain amino acid ABC transporter n=2 Ta... 124 5e-27 UniRef50_C0GH32 Extracellular ligand-binding receptor n=1 Tax=De... 124 8e-27 UniRef50_C0QGJ8 ABC-type transporter, substrate-binding protein ... 122 2e-26 UniRef50_A8TTJ6 Branched-chain amino acid ABC transporter, amino... 120 6e-26 UniRef50_C7HSH7 Branched-chain amino acid ABC superfamily ATP bi... 120 8e-26 UniRef50_B5HG53 Extracellular ligand-binding receptor n=1 Tax=St... 119 2e-25 UniRef50_B9L7B1 High affinity branched-chain amino acid ABC tran... 119 2e-25 UniRef50_A8LXP7 Extracellular ligand-binding receptor n=3 Tax=Sa... 118 3e-25 UniRef50_A5IN43 Extracellular ligand-binding receptor n=9 Tax=Th... 118 3e-25 UniRef50_C9NK09 Extracellular ligand-binding receptor n=3 Tax=St... 118 4e-25 UniRef50_A9AXZ7 Extracellular ligand-binding receptor n=1 Tax=He... 117 5e-25 UniRef50_Q13IE6 ABC branched chain amino acid family transporter... 117 5e-25 UniRef50_B1L6B9 ABC-type branched-chain amino acid transport sys... 117 5e-25 UniRef50_B1I4I1 Extracellular ligand-binding receptor n=4 Tax=Cl... 117 6e-25 UniRef50_Q1J0R2 Extracellular ligand-binding receptor n=2 Tax=De... 117 9e-25 UniRef50_A1UHF2 Extracellular ligand-binding receptor n=9 Tax=Ac... 116 1e-24 UniRef50_B3W8M3 Branched-chain amino acid ABC transporter, subst... 116 1e-24 UniRef50_A0RN18 Branched-chain amino-acid ABC transport system p... 115 2e-24 UniRef50_Q2RFK5 Extracellular ligand-binding receptor n=3 Tax=Cl... 115 3e-24 UniRef50_C8W363 Extracellular ligand-binding receptor n=1 Tax=De... 115 4e-24 UniRef50_A4J594 Extracellular ligand-binding receptor n=2 Tax=Ba... 115 4e-24 UniRef50_C9ACC1 Branched-chain amino acid transporter n=3 Tax=En... 114 6e-24 UniRef50_A1HU78 Extracellular ligand-binding receptor n=1 Tax=Th... 114 7e-24 UniRef50_A1SHR8 Extracellular ligand-binding receptor n=1 Tax=No... 114 7e-24 UniRef50_C7NDV1 Extracellular ligand-binding receptor n=3 Tax=Le... 114 8e-24 UniRef50_B1HNQ1 Branched chain amino acid ABC transporter (Subst... 114 8e-24 UniRef50_A5FZN6 Extracellular ligand-binding receptor n=1 Tax=Ac... 113 1e-23 UniRef50_Q0AV49 Branched-chain amino acid ABC transporter, perip... 112 2e-23 UniRef50_Q67LV0 Branched chain amino acid ABC transporter substr... 112 2e-23 UniRef50_Q73K61 High-affinity branched chain amino acid ABC tran... 112 3e-23 UniRef50_D0D0C1 Extracellular ligand-binding receptor n=1 Tax=Ci... 112 3e-23 UniRef50_Q127P6 Extracellular ligand-binding receptor n=5 Tax=Pr... 111 4e-23 UniRef50_B0TD42 Branched chain amino acid abc transporter, amino... 111 4e-23 UniRef50_D2B8C1 Extracellular ligand-binding receptor n=2 Tax=St... 111 4e-23 UniRef50_Q83MT4 Branched-chain amino acid ABC transporter substr... 110 6e-23 UniRef50_A9U581 Predicted protein (Fragment) n=1 Tax=Physcomitre... 110 6e-23 UniRef50_Q0ATW1 Branched chain amino acid ABC transporter (Subst... 110 9e-23 UniRef50_B3ENC9 Extracellular ligand-binding receptor n=1 Tax=Ch... 110 1e-22 UniRef50_C8XBP2 Extracellular ligand-binding receptor n=2 Tax=Ac... 109 2e-22 UniRef50_Q03M75 ABC-type branched-chain amino acid transport sys... 108 4e-22 UniRef50_B8J3K0 Extracellular ligand-binding receptor n=10 Tax=D... 107 6e-22 UniRef50_D1B6L8 Extracellular ligand-binding receptor n=1 Tax=Th... 107 1e-21 UniRef50_C4FV28 Putative uncharacterized protein n=1 Tax=Catonel... 105 2e-21 UniRef50_A4XM95 Extracellular ligand-binding receptor n=4 Tax=Cl... 105 3e-21 UniRef50_B1C374 Putative uncharacterized protein n=2 Tax=Erysipe... 105 3e-21 UniRef50_C6WB66 Extracellular ligand-binding receptor n=1 Tax=Ac... 105 3e-21 UniRef50_A8SAA0 Putative uncharacterized protein n=1 Tax=Faecali... 105 3e-21 UniRef50_B8IZP5 Extracellular ligand-binding receptor n=9 Tax=Ba... 104 4e-21 UniRef50_C4XNN1 Putative ABC transporter substrate binding prote... 104 5e-21 UniRef50_A0LKN6 Extracellular ligand-binding receptor n=1 Tax=Sy... 104 6e-21 UniRef50_A1A0J1 Solute binding protein of ABC transporter for br... 104 6e-21 UniRef50_Q89G66 ABC transporter substrate-binding protein n=1 Ta... 103 7e-21 UniRef50_A8IHA6 ABC-type branched-chain amino acid transport sys... 103 9e-21 UniRef50_C7H459 High affinity branched-chain amino acid ABC tran... 103 1e-20 UniRef50_Q2JNB6 Hydrophobic amino acid ABC transporter (HAAT) fa... 103 1e-20 UniRef50_A6TPW6 Extracellular ligand-binding receptor n=1 Tax=Al... 103 1e-20 UniRef50_D2MYC8 High affinity branched-chain amino acid ABC tran... 102 2e-20 UniRef50_C2CF86 Branched chain amino acid ABC superfamily ATP bi... 102 3e-20 UniRef50_Q0YRE9 Extracellular ligand-binding receptor n=1 Tax=Ch... 102 3e-20 UniRef50_Q7W0W5 Putative branched-chain amino acid-binding prote... 102 3e-20 UniRef50_Q2RMX3 Extracellular ligand-binding receptor n=2 Tax=Ba... 102 3e-20 UniRef50_Q13IR8 ABC branched chain amino acid family transporter... 101 3e-20 UniRef50_B8FGX7 Extracellular ligand-binding receptor n=3 Tax=De... 101 4e-20 UniRef50_C7QC96 Extracellular ligand-binding receptor n=2 Tax=Ca... 101 4e-20 UniRef50_Q2YK50 Leu/Ile/Val-binding protein homolog 8 n=68 Tax=A... 101 4e-20 UniRef50_A5CZW6 ABC-type branched-chain amino acid transport sys... 101 4e-20 UniRef50_B8FK55 Extracellular ligand-binding receptor n=1 Tax=De... 101 5e-20 UniRef50_D0BNJ8 Branched-chain amino acid ABC transporter amino ... 101 6e-20 UniRef50_B8IDJ0 Extracellular ligand-binding receptor n=4 Tax=Rh... 100 1e-19 UniRef50_C2KVU8 Branched chain amino acid ABC superfamily ATP bi... 100 2e-19 UniRef50_A9KNN4 Extracellular ligand-binding receptor n=4 Tax=Fi... 99 2e-19 UniRef50_D1B9T5 Extracellular ligand-binding receptor n=2 Tax=Sy... 98 4e-19 UniRef50_B5YK45 Leu/ile/val-binding protein n=1 Tax=Thermodesulf... 97 9e-19 UniRef50_B9JHQ3 ABC transporter substrate-binding protein n=7 Ta... 97 9e-19 UniRef50_B4SCM8 Extracellular ligand-binding receptor n=1 Tax=Pe... 97 1e-18 UniRef50_B9L4C0 Branched-chain amino acid ABC transporter, perip... 97 1e-18 UniRef50_A0NLZ5 Hydrophobic amino acid ABC transporter (HAAT) fa... 96 2e-18 UniRef50_C5ELH4 Predicted protein n=1 Tax=Clostridiales bacteriu... 96 2e-18 UniRef50_A5N0V5 LivK n=2 Tax=Clostridium kluyveri RepID=A5N0V5_C... 96 2e-18 UniRef50_Q7WM42 Putative amino acid ABC transport system, substr... 96 2e-18 UniRef50_Q12GM8 Extracellular ligand-binding receptor n=1 Tax=Po... 96 2e-18 UniRef50_A8R9T6 Putative uncharacterized protein n=2 Tax=unclass... 96 3e-18 UniRef50_C8X2A2 Extracellular ligand-binding receptor n=1 Tax=De... 96 3e-18 UniRef50_C4ZMW4 Extracellular ligand-binding receptor n=4 Tax=Pr... 96 3e-18 UniRef50_A1WRT6 Extracellular ligand-binding receptor n=1 Tax=Ve... 96 3e-18 UniRef50_A1WEQ0 Extracellular ligand-binding receptor n=1 Tax=Ve... 94 6e-18 UniRef50_C4X495 ABC transport system periplasmic binding compone... 94 6e-18 UniRef50_A9FT17 Branched-chain amino acid ABC transporter, amino... 94 6e-18 UniRef50_C0D1T2 Putative uncharacterized protein n=1 Tax=Clostri... 94 6e-18 UniRef50_A8UX91 ABC transporter substrate-binding protein n=1 Ta... 94 7e-18 UniRef50_Q89G98 ABC transporter ATP-binding protein n=2 Tax=Alph... 94 1e-17 UniRef50_D1C6F1 Extracellular ligand-binding receptor n=1 Tax=Sp... 93 1e-17 UniRef50_Q2IRP0 Extracellular ligand-binding receptor n=1 Tax=Rh... 93 1e-17 UniRef50_D1CEZ7 Extracellular ligand-binding receptor n=1 Tax=Th... 93 1e-17 UniRef50_C0CTG8 Putative uncharacterized protein n=1 Tax=Clostri... 93 2e-17 UniRef50_C2D7C9 Branched chain amino acid ABC superfamily ATP bi... 93 2e-17 UniRef50_B0PGR3 Putative uncharacterized protein n=1 Tax=Anaerot... 92 4e-17 UniRef50_A0LGK7 Extracellular ligand-binding receptor n=1 Tax=Sy... 91 4e-17 UniRef50_A9BJ64 Extracellular ligand-binding receptor n=2 Tax=Th... 91 5e-17 UniRef50_B8G0I4 Extracellular ligand-binding receptor n=18 Tax=B... 91 5e-17 UniRef50_B0TAA3 Branched-chain amino acid abc transporter, subst... 91 5e-17 UniRef50_D1SZL8 Extracellular ligand-binding receptor n=2 Tax=Co... 91 5e-17 UniRef50_UPI0000383226 COG0683: ABC-type branched-chain amino ac... 91 8e-17 UniRef50_Q9AMZ3 Bll2018 protein n=1 Tax=Bradyrhizobium japonicum... 91 9e-17 UniRef50_A8UVG6 Putative branched-chain amino acid transporter s... 90 1e-16 UniRef50_A1WPI8 Extracellular ligand-binding receptor n=3 Tax=Pr... 90 2e-16 UniRef50_A7IFS3 Extracellular ligand-binding receptor n=3 Tax=Pr... 89 2e-16 UniRef50_A5CZP1 ABC-type branched-chain amino acid transport sys... 89 2e-16 UniRef50_C5EHL3 Extracellular ligand-binding receptor n=4 Tax=Cl... 89 3e-16 UniRef50_Q21SP4 Extracellular ligand-binding receptor n=5 Tax=Co... 88 4e-16 UniRef50_B3QJ86 Extracellular ligand-binding receptor n=3 Tax=Br... 88 4e-16 UniRef50_A7IFL6 Extracellular ligand-binding receptor n=2 Tax=Xa... 88 5e-16 UniRef50_C0QII0 LivK2 n=1 Tax=Desulfobacterium autotrophicum HRM... 88 6e-16 UniRef50_A7BUD9 Extracellular ligand-binding receptor n=1 Tax=Be... 87 7e-16 UniRef50_B1Y595 Extracellular ligand-binding receptor n=10 Tax=P... 87 9e-16 UniRef50_C5ET85 Extracellular ligand-binding receptor n=1 Tax=Cl... 87 1e-15 UniRef50_Q12H77 Extracellular ligand-binding receptor n=8 Tax=Co... 87 1e-15 UniRef50_B0TAM9 Branched-chain amino acid abc transporter, amino... 87 1e-15 UniRef50_B8DRY9 Extracellular ligand-binding receptor n=1 Tax=De... 87 1e-15 UniRef50_D2L0U6 Extracellular ligand-binding receptor n=1 Tax=De... 87 1e-15 UniRef50_Q1M9I2 Putative branched-chain amino acid ABC transport... 86 2e-15 UniRef50_C1CVB8 Putative branched chain amino acid ABC transport... 86 2e-15 UniRef50_A0LKN5 Extracellular ligand-binding receptor n=1 Tax=Sy... 86 2e-15 UniRef50_Q47QP5 Branched-chain amino acid transport system subst... 86 2e-15 UniRef50_A9KIM2 Extracellular ligand-binding receptor n=1 Tax=Cl... 86 3e-15 UniRef50_Q7M8R4 ABC TRANSPORT SYSTEM PERIPLASMIC BINDING PROTEIN... 85 3e-15 UniRef50_UPI00016BFE10 Leucine-, isoleucine-, valine-, threonine... 85 3e-15 UniRef50_A3U1C1 Hypothetical branched-chain amino acid ABC trans... 85 4e-15 UniRef50_C3HBK1 Putative uncharacterized protein n=1 Tax=Bacillu... 85 5e-15 UniRef50_Q1GH61 Extracellular ligand-binding receptor n=43 Tax=r... 84 6e-15 UniRef50_A1VTJ7 Extracellular ligand-binding receptor n=6 Tax=Bu... 84 6e-15 UniRef50_B5Y600 Putative branched chain amino acid ABC transport... 84 9e-15 UniRef50_Q5P4W9 Probablel eucine-Binding Protein (LBP) n=2 Tax=R... 84 9e-15 UniRef50_D0L9S4 Extracellular ligand-binding receptor n=1 Tax=Go... 84 1e-14 UniRef50_Q2KVE9 ABC transporter, substrate-binding protein n=1 T... 84 1e-14 UniRef50_C8WA26 Extracellular ligand-binding receptor n=2 Tax=At... 83 1e-14 UniRef50_A6UKD7 Extracellular ligand-binding receptor n=2 Tax=Si... 83 2e-14 UniRef50_A5G352 Extracellular ligand-binding receptor n=1 Tax=Ac... 83 2e-14 UniRef50_C4XSR4 ABC transporter substrate binding protein n=1 Ta... 83 2e-14 UniRef50_C0Z9I1 ABC transporter substrate binding protein n=1 Ta... 82 3e-14 UniRef50_Q11L42 Extracellular ligand-binding receptor n=1 Tax=Ch... 82 3e-14 UniRef50_C4WKT5 Leu/Ile/Val-binding protein n=1 Tax=Ochrobactrum... 82 4e-14 UniRef50_D1VQJ4 Extracellular ligand-binding receptor n=1 Tax=Fr... 81 6e-14 UniRef50_Q16A58 Branched-chain amino acid ABC transporter, perip... 81 6e-14 UniRef50_C3MCL1 Putative solute-binding component of ABC transpo... 81 7e-14 UniRef50_Q13LT2 ABC branched chain amino acid family transporter... 80 1e-13 UniRef50_Q1AZ39 Extracellular ligand-binding receptor n=1 Tax=Ru... 80 1e-13 UniRef50_C9LQP4 Putative branched-chain amino acid ABC transport... 80 1e-13 UniRef50_Q30XN2 ABC-type branched-chain amino acid transport sys... 80 1e-13 UniRef50_A8MJQ2 Extracellular ligand-binding receptor n=6 Tax=Ba... 80 1e-13 UniRef50_A1W9P5 Extracellular ligand-binding receptor n=3 Tax=Co... 80 1e-13 UniRef50_A7HAB6 Extracellular ligand-binding receptor n=8 Tax=Ba... 80 1e-13 UniRef50_A1WEM5 Extracellular ligand-binding receptor n=2 Tax=Co... 80 2e-13 UniRef50_B0UEJ1 Extracellular ligand-binding receptor n=3 Tax=Rh... 79 2e-13 UniRef50_A5D536 ABC-type branched-chain amino acid transport sys... 79 2e-13 UniRef50_A7HUK3 Extracellular ligand-binding receptor n=6 Tax=Al... 79 2e-13 UniRef50_A4BI85 Branched-chain amino acid ABC transporter, perip... 79 3e-13 UniRef50_C5T0A8 Extracellular ligand-binding receptor n=1 Tax=Ac... 79 4e-13 UniRef50_A7ID05 Extracellular ligand-binding receptor n=5 Tax=Pr... 78 6e-13 UniRef50_Q2YJA9 Leu/Ile/Val-binding protein homolog 5 n=41 Tax=P... 78 6e-13 UniRef50_A6X7H9 Extracellular ligand-binding receptor n=3 Tax=Al... 78 7e-13 >UniRef50_P04816 Leucine-specific-binding protein n=310 Tax=Proteobacteria RepID=LIVK_ECOLI Length = 369 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/369 (100%), Positives = 369/369 (100%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG Sbjct: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI Sbjct: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS Sbjct: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG Sbjct: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV Sbjct: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH Sbjct: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 Query: 361 ADGSSTAAK 369 ADGSSTAAK Sbjct: 361 ADGSSTAAK 369 >UniRef50_Q399U6 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=59 Tax=Bacteria RepID=Q399U6_BURS3 Length = 399 Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/347 (52%), Positives = 245/347 (70%), Gaps = 1/347 (0%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + +K+A+ G MSG +AQ+GDM GA AI+ INA GG G+K V DDAC+PKQAVA Sbjct: 53 ETVKIAIAGPMSGSVAQYGDMVKAGALTAIEQINAAGGAGGNKFEVVMMDDACEPKQAVA 112 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH-IMRTAG 142 VANKIV+ IKYVIGH+CS ST PASDIYE+EGI+M++P AT P+LT+ +H I RT G Sbjct: 113 VANKIVSQKIKYVIGHVCSGSTIPASDIYENEGIVMVTPSATAPQLTEGKKRHFIFRTIG 172 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D QGP AA YI+ VKP+++A++HDKQ YG+G+A SV+ L+AA VV F+GI AG+ Sbjct: 173 RDDQQGPAAAHYIINNVKPKKVAVLHDKQSYGQGIASSVKKDLEAAKIPVVLFEGINAGD 232 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 D+SA+I +LK + +DFVY+GGY+PEMG ++RQAR G+K FMGPEGVGN ++ IAG Sbjct: 233 SDYSAIITKLKSQGVDFVYFGGYHPEMGLLMRQAREQGVKATFMGPEGVGNKDVTAIAGP 292 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 A+EGMLVT+P + DPAN +V A K+DP+GP+ YAAV+ +A ++ + +P Sbjct: 293 ASEGMLVTLPADFSADPANAALVKAFADKKRDPNGPFQMPAYAAVKIIADSIAGAKTTDP 352 Query: 323 LALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + + +T IG + +D +GDLK F F V+ WH D + TAAK Sbjct: 353 TKVAAYMHKTTFDTPIGKVAYDAQGDLKAFKFVVYTWHKDATKTAAK 399 >UniRef50_A1WJ16 Extracellular ligand-binding receptor n=2 Tax=Proteobacteria RepID=A1WJ16_VEREI Length = 358 Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust. Identities = 179/349 (51%), Positives = 241/349 (69%), Gaps = 1/349 (0%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 +A A +++A+ G MSG +AQ+GDM G AI+ INA G G KL V DDAC+PK Sbjct: 8 SAQAQTVQIAIAGPMSGSVAQYGDMVKAGVLTAIEQINAAGAAGGHKLEAVMMDDACEPK 67 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ-RGYQHIM 138 QAVAVANKIV+ IKYVIGH+CS ST PASDIYE+EGI+M++P AT P++T+ + + I Sbjct: 68 QAVAVANKIVSQRIKYVIGHMCSGSTIPASDIYENEGIVMVTPSATVPQITEGKKRKFIF 127 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 RT G D QGP AA++I+ V+P ++A++HDKQ YG+GLA SV+ L A VV F+G+ Sbjct: 128 RTTGRDDQQGPVAARHIIAKVQPGKVAVLHDKQSYGQGLATSVKKVLDEAKVPVVLFEGV 187 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 AG+ D+SA+I ++K + DFVY+GGY+PEMG +LRQAR G+K FMGPEGVGN ++ Sbjct: 188 NAGDSDYSAVITKIKAQGADFVYFGGYHPEMGLLLRQAREQGVKATFMGPEGVGNKDVTA 247 Query: 259 IAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 IAG A+EGMLVT+P + +DPAN +V A K+D +GP+ YAAV+ +A A+ T Sbjct: 248 IAGPASEGMLVTLPADFSEDPANAALVKAFADKKRDINGPFQLPAYAAVKIIADAMAGTK 307 Query: 319 SDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 S +P + + N T IG + +D +GDLK F F VF WH D + TA Sbjct: 308 SADPAKVAAYMHQNAFQTPIGKVEYDAQGDLKSFKFVVFTWHKDATKTA 356 >UniRef50_Q2RSC4 Extracellular ligand-binding receptor n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RSC4_RHORT Length = 370 Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 150/348 (43%), Positives = 204/348 (58%) Query: 14 ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYD 73 ALAIS DI V + ++G IA G+ GA AI N GG+KG+ + D Sbjct: 15 ALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKAGGLKGETITLQVED 74 Query: 74 DACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG 133 DACDPKQ VAVANK V+ G++ VIGH+C+ T AS +Y +E I M++ AT P+LT+RG Sbjct: 75 DACDPKQGVAVANKFVSAGVEAVIGHMCTGPTMAASTVYSEEEIPMVTASATGPDLTERG 134 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 ++ R G D QG A K I E Q AI+HDKQ YG GLA + + AA Sbjct: 135 LTNVFRATGRDDQQGTIAGKMIAERFADQTTAIVHDKQAYGRGLAEEAKKAMNAAGKEEA 194 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 F I GE+DFSALI+RLK+ + VYYGGYY ++GQ++RQ+R+ GL F+G +G+ + Sbjct: 195 LFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQGLDAVFVGGDGLSS 254 Query: 254 ASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 + I G+A EG L T +PA + V+A KAD K + + + YAA Q L A Sbjct: 255 SEFWAITGEAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNFAYYYYAAAQVLTQA 314 Query: 314 LERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 + + GS +P A+ K L+ N TV GP+++D KGDL F +QW A Sbjct: 315 MAKAGSADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQWSA 362 >UniRef50_A8IDI7 Amino acid ABC transporter substrate binding protein n=36 Tax=Alphaproteobacteria RepID=A8IDI7_AZOC5 Length = 403 Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 150/342 (43%), Positives = 206/342 (60%), Gaps = 4/342 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ V G M+GP A +G NG QA+ DINA GGI G K+ DDA P Q +VA Sbjct: 62 VKLGVAGPMTGPNAAFGAQLKNGVEQAVTDINASGGILGQKIQVFVGDDASTPAQGTSVA 121 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 NK ++DG+KYV+GH S + P S YE+ GIL I+P +TNP T+R ++ RT G D Sbjct: 122 NKFISDGVKYVVGHFNSGVSIPTSTNYEEGGILQITPASTNPTFTERKLWNVFRTCGRDD 181 Query: 146 SQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDF 205 QG A +YIL+ +K ++IAI+HDK YG+GLA Q + V ++GIT GEKD+ Sbjct: 182 QQGAVAGEYILKNLKDKKIAIVHDKTPYGKGLADETQKAINKGGVKEVVYEGITPGEKDY 241 Query: 206 SALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAE 265 SAL+++LK ++ +YYGG +PE G ++RQ R G+KT +G+ + IAG AE Sbjct: 242 SALVSKLKAAGVEVLYYGGLHPEAGLLVRQMRDQGMKTVLFSGDGITDKEYWTIAGPGAE 301 Query: 266 GMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLAL 325 G L+T ++ A + +VD KA DP G YV +YAAVQ + A E T S +P Sbjct: 302 GTLMTFGPDPRKNAAAKEVVDRFKAKGIDPEG-YVLYSYAAVQIIKQAAEATKSLDP-KK 359 Query: 326 VKDLKANGA--NTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 V D +GA NTV+GPL +D+KGDL D+ V+ W G S Sbjct: 360 VADYMHSGATFNTVLGPLAFDKKGDLTKLDYVVYVWKDGGYS 401 >UniRef50_Q2YLF8 Leu/Ile/Val-binding protein homolog 1 n=80 Tax=Proteobacteria RepID=LIVB1_BRUA2 Length = 371 Score = 266 bits (680), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 151/366 (41%), Positives = 218/366 (59%), Gaps = 5/366 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M++ + +A +A +A AD + V + ++GP A +G GA AIK++N G Sbjct: 1 MRKTLFSGVALAAVIAFGGSAWAD-VLVGIGIPVTGPNAVYGAQIQKGAEAAIKEVNDAG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GI G+K+ DD DPKQ ++VANK DG+K+VIGH S T PAS +Y + GIL I Sbjct: 60 GINGEKIAITIGDDVSDPKQGISVANKFAADGVKFVIGHFNSGVTIPASQVYAENGILEI 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SPGATNP+ T++G + RT G D QG A +YI + K +IA+IHDK YG+GLA Sbjct: 120 SPGATNPQYTEQGLWNTFRTCGRDDQQGTVAGQYIFDHFKDAKIAVIHDKTPYGQGLADE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + L ++G+ GEKDFSALIA+LK+ ++ VY+GG +PE G ++RQ G Sbjct: 180 TKKKLNELGTKETLYEGVNVGEKDFSALIAKLKQAGVNVVYWGGMHPEAGLLIRQMADQG 239 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LK QF+ +G+ + L++IAGDA G++ T D AN ++ A + +P Y Sbjct: 240 LKAQFISGDGIVSNELASIAGDAVAGVMNTFGPDPRDDKANAELIKAFRDKGFEPEA-YT 298 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGA-NTVIGPLNWDEKGDLKGFDFGVFQW 359 +YAAVQSLA A + GS++P + K +K G TV+G L++DEKGD K + +++W Sbjct: 299 LYSYAAVQSLAQAAKAAGSNDPQEVAKAMKEKGPFKTVLGDLSYDEKGDPKLPGYVMYKW 358 Query: 360 H--ADG 363 ADG Sbjct: 359 EKGADG 364 >UniRef50_Q8G3D4 Leu/Ile/Val-binding protein homolog 3 n=53 Tax=Rhizobiales RepID=LIVB3_BRUSU Length = 368 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 134/337 (39%), Positives = 199/337 (59%), Gaps = 3/337 (0%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 DI + V+ ++GP+A +GD GA A++ IN GGIKG+K+V DDA +PKQ V+ Sbjct: 24 DITIGVIAPLTGPVAAFGDQVKKGAETAVEVINKAGGIKGEKVVLKFADDAGEPKQGVSA 83 Query: 85 ANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 AN+IV DGIK+V+G + + P SD+ + G+LM++P AT P+LT RG +++ RT G D Sbjct: 84 ANQIVGDGIKFVVGPVTTGVAVPVSDVLSENGVLMVTPTATGPDLTARGLENVFRTCGRD 143 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 Q A Y+L+ +K +++A+IHDK YG+GLA + + + V +D +T G+KD Sbjct: 144 DQQAEVMADYVLKNMKDKKVAVIHDKGAYGKGLADAFKAAINKGGITEVHYDSVTPGDKD 203 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 FSAL+ +LK + VY+GGY+ E G + RQ G++ +G EG+ N I G A Sbjct: 204 FSALVTKLKSAGAEVVYFGGYHAEGGLLSRQLHDAGMQALVLGGEGLSNTEYWAIGGTNA 263 Query: 265 EGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS-DEPL 323 +G L T K ++PA + + ALKA K P+ + YAAV+ + +ER GS D+ Sbjct: 264 QGTLFTNAKDATKNPAAKDAIQALKA-KNIPAEAFTMNAYAAVEVIKAGIERAGSTDDSA 322 Query: 324 ALVKDLK-ANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 A+ K L T IG L + E GDL F +F+W Sbjct: 323 AVAKALHDGKPIETAIGTLTYSETGDLSSPSFDIFKW 359 >UniRef50_Q11D26 Extracellular ligand-binding receptor n=3 Tax=Alphaproteobacteria RepID=Q11D26_MESSB Length = 366 Score = 253 bits (647), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 147/361 (40%), Positives = 212/361 (58%), Gaps = 5/361 (1%) Query: 6 KTIIAGM-IALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 K ++AG + L ++ +A AD I +A VG M+G A +G GA QA+ DINA GG+ G Sbjct: 3 KILLAGAALGLVMTGSAWAD-ITIATVGPMTGQYASFGAQMRAGAEQAVADINAAGGVNG 61 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 + L DDACDPKQAVAVAN++ G+ +V GH CS S+ PAS +Y DE I+MISP + Sbjct: 62 EMLRLEVGDDACDPKQAVAVANQLAGSGVVFVAGHFCSGSSIPASQVYADEEIVMISPAS 121 Query: 125 TNPELT-QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183 TNP T +R I R G D QG A K++ E ++IA IHDK YG+GLA + Sbjct: 122 TNPTFTDERPGPGIYRVCGRDDQQGNVAGKFLAEKFADKKIAFIHDKTAYGKGLADATMA 181 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 + A + ++ TAGEKD++AL+++LK+E ID +Y GGYY E G + RQ R G++T Sbjct: 182 VYEEAGGSPALYEAYTAGEKDYTALVSKLKQEGIDILYVGGYYTEAGLIARQMREQGMQT 241 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWIT 303 + + + I GDA EG L+T ++P + +VDA+ A K G Y T Sbjct: 242 ILVSGDALVADEYWAITGDAGEGTLMTFSPDPRKNPEAKPVVDAMLAAGKTTEG-YSLYT 300 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADG 363 YAA+Q+ A++ GS + + + L NTV+G L +D+KGD+ + ++W DG Sbjct: 301 YAAIQAWVDAVKNAGSTDFEPVTEALNEGKFNTVLGTLEFDDKGDVTLPGYVFYEWK-DG 359 Query: 364 S 364 + Sbjct: 360 T 360 >UniRef50_D0LYK9 Extracellular ligand-binding receptor n=4 Tax=Proteobacteria RepID=D0LYK9_HALO1 Length = 417 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 138/340 (40%), Positives = 207/340 (60%), Gaps = 1/340 (0%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 T + I +AV G M+G A +G GA+QA+ D+NAKGG+ G +L DDACDPK Sbjct: 43 TDSGEPIVIAVAGPMTGQYASFGQQMAAGAKQAVADLNAKGGVLGRQLQLEVGDDACDPK 102 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 QAVAVAN++V G +V GH CS S+ PA+ +Y++EGI+ ISPG+T+P+LT+ G + + R Sbjct: 103 QAVAVANQMVQQGAVFVAGHWCSGSSIPANQVYDEEGIVSISPGSTSPKLTEEGGEMVFR 162 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 G D QG AAK+++E + IA++HDK YG+GLA + L+A ++ T Sbjct: 163 VCGRDDQQGEVAAKFLMEQFPGKNIAVLHDKTAYGKGLADETRKNLQAGGLEPTLYEAYT 222 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 AGEKD++AL+++LK+ ID VY GGY+ E G +LRQ R G+++ M + + +I Sbjct: 223 AGEKDYTALVSKLKQNEIDVVYIGGYHTEAGLILRQMREQGMESVLMSGDALVTQEYWSI 282 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 GDA G L+T ++ +V+ + K +P G YV TY A+Q+ A A E G Sbjct: 283 TGDAGAGTLMTFSPDPRKNENAAAVVEVFREQKIEPEG-YVLYTYGAIQAWAAAAEAAGK 341 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 + A+V+ L A TV+G + +D+KGD+ + V++W Sbjct: 342 VDADAVVEKLHAMEFETVLGSIGFDDKGDVTAPGYVVYEW 381 >UniRef50_Q985D9 ABC transporter, binding protein n=2 Tax=Mesorhizobium RepID=Q985D9_RHILO Length = 399 Score = 249 bits (637), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 140/347 (40%), Positives = 204/347 (58%), Gaps = 8/347 (2%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 A ADDI V+VVG M+G +A GD GA+ A INA GG+ G + DD CDPK Sbjct: 46 VAFADDITVSVVGPMTGQLATIGDQFKQGAQAAADAINAAGGVNGSMIKLDIEDDQCDPK 105 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT----QRGYQ 135 QAV+VAN+I+ +G+K++ GH CS S+ PAS +Y + G LM+SP ++NP LT + G+ Sbjct: 106 QAVSVANRIIANGVKFIDGHACSGSSIPASAVYAEAGALMMSPASSNPVLTDAAAKAGWP 165 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 IMR D +QG +I + + + I+HDK YG+G+A +V+ + V++ Sbjct: 166 TIMRLYTRDDAQGAFIGPWIAKKYAGKNVVILHDKSAYGQGVADAVRATMNTGGLKEVYY 225 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 D I GEKD+SAL+ +LK D VY+GGY+PE G +LRQ+ LK Q + P+ + + Sbjct: 226 DAINPGEKDYSALVTKLKDLKADVVYFGGYHPEAGLILRQSAEQNLKFQLIMPDSIASPE 285 Query: 256 LSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 +AG A EG + P P + V+ +KA P G + +YA VQ+ A ++ Sbjct: 286 FWQVAGPAGEGTMFVFPSDPQAKPEAKAAVEKIKAGGFVPEG-FTLFSYAVVQAFAEGIK 344 Query: 316 RTGSDEPLALVKDLKANGA--NTVIGPLNWDEKGDLKGFDFGVFQWH 360 R GSD+P + + LK NG +TV+G + +DEKGDLK + + QWH Sbjct: 345 RAGSDDPAKVAEALK-NGTPISTVVGDVTFDEKGDLKNASYDINQWH 390 >UniRef50_B6ISN6 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=5 Tax=Proteobacteria RepID=B6ISN6_RHOCS Length = 372 Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 131/341 (38%), Positives = 196/341 (57%), Gaps = 1/341 (0%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A + V + ++G +A G+ GA QA+ DINA GG+ G+ L + DD P QAV Sbjct: 26 AAETAVGLAAPLTGQLAAVGEQLRRGAEQAVADINAAGGVLGEPLRLIPADDGGVPAQAV 85 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 AVAN++ +G+ V+GHL S +T PAS +YEDEGI+ I+P AT+PE+T+ + RT G Sbjct: 86 AVANRLATEGVALVVGHLQSGTTIPASQVYEDEGIVTITPTATSPEVTEGDRTLVFRTCG 145 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D QG A ++ +R+A++HD+ YG+GLA + + + A N V + +T GE Sbjct: 146 RDDQQGDVAGGWLARHFAGRRVAVVHDQTTYGKGLADATRAAMAAKGLNDVLYTSLTLGE 205 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 +DF+AL+ R+K N+D VY+GG Y E ++RQAR G+ F+ + + IAG Sbjct: 206 RDFTALVTRIKAANVDAVYFGGLYTEAALLIRQAREAGVTALFVSGDTLATDEFQAIAGP 265 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 AAEGM +T P Q ++ L+A+ +P G Y YAAVQ A A E+ GS + Sbjct: 266 AAEGMTMTFSADARAKPEAQDLIARLRANGGEP-GAYTLYAYAAVQVWAKAAEKAGSTDG 324 Query: 323 LALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADG 363 + L+ TV+GPL +D KGD D+ +++W + G Sbjct: 325 ARVAATLRQGDYATVVGPLAFDAKGDRTSTDYVMYRWGSAG 365 >UniRef50_Q2YLG0 Leu/Ile/Val-binding protein homolog 2 n=42 Tax=Brucellaceae RepID=LIVB2_BRUA2 Length = 371 Score = 243 bits (621), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 139/361 (38%), Positives = 206/361 (57%), Gaps = 3/361 (0%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK++ + +A+ T+ AD I V V ++G A +G+ G A+ + NAKG Sbjct: 1 MKKSLFCGVCLCALVAMGGTSFAD-IMVGVGAPLTGSQAAFGEQIKRGVEAAVAEANAKG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G+++ V DDA DPKQ ++VANK V DG+K+VIGH S + P SDIY + G+LMI Sbjct: 60 GMNGEQITLVYGDDAADPKQGISVANKFVGDGVKFVIGHFNSGVSIPTSDIYAENGVLMI 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 +PG TNP T+R + RT D QG KY+ + K ++AI+HDK YG+GLA Sbjct: 120 APGTTNPTFTERELWNTFRTCRRDDKQGIVPGKYMADNYKDGKVAILHDKTPYGQGLADE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + L ++G+ GEKDFSALIA+LK+ ++ VY+GG +PE G ++RQ G Sbjct: 180 TKKKLNELGTKETLYEGVNVGEKDFSALIAKLKQAGVNVVYWGGLHPEAGLIIRQMADQG 239 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LK QF+ +G+ + L++IAG A EG L T +P N +V + +P Y Sbjct: 240 LKAQFISGDGIVSNELASIAGPAVEGTLNTFGPDPRNNPDNAELVKKFRDAGFEPEA-YT 298 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGA-NTVIGPLNWDEKGDLKGFDFGVFQW 359 + YA VQSL A GS++P+ + +K G TV+G +++D KGD + +F+W Sbjct: 299 FYAYAGVQSLVNAANAAGSNDPMEVATAMKEKGPFKTVLGDISFDAKGDPSLSPYVMFEW 358 Query: 360 H 360 Sbjct: 359 R 359 >UniRef50_C7RS11 Extracellular ligand-binding receptor n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS11_9PROT Length = 365 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 139/335 (41%), Positives = 195/335 (58%), Gaps = 2/335 (0%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 D VA+ G M+G A GD GA AI DINAKGG+ G KL DDACDPKQAVAV Sbjct: 23 DHPVAIAGPMTGQYASAGDQIKKGAEMAITDINAKGGVLGQKLKLEIGDDACDPKQAVAV 82 Query: 85 ANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 AN +VN I ++ GH CSSST PASD+Y + I M++ +TNP++T RG ++I AG D Sbjct: 83 ANTMVNKKIVFMHGHWCSSSTIPASDVYNEAQIPMVTV-STNPKVTDRGLKNIFAIAGRD 141 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QG A Y+ E K ++IA++ DK YG+GLA V ++A A + ITAGEKD Sbjct: 142 DQQGQVAGAYLAENFKGKKIAVVDDKSAYGKGLADEVAKAMEAKGAKPALRESITAGEKD 201 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 +S L+++LK ++ + +GGY+ E+ +LRQA+ GLK MG + + N+ L+ AG A Sbjct: 202 YSGLVSKLKSARVEVMAFGGYHTEVALILRQAQQAGLKLTIMGGDTMSNSELATAAGAQA 261 Query: 265 EGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLA 324 +L T ++P+ +V K +P G YV YAA Q A + S + Sbjct: 262 NNVLFTFGPDARKNPSAAAVVKKFHDAKIEPEG-YVLYAYAAFQLFDQAAVKAKSTKYGD 320 Query: 325 LVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 L K L++ +TVIG +++D G+ F V+QW Sbjct: 321 LEKALRSGTFDTVIGKISFDANGNSSAPAFVVYQW 355 >UniRef50_Q9AQ31 40kDa leucine-binding transmembrane protein n=3 Tax=Bradyrhizobium RepID=Q9AQ31_BRASW Length = 384 Score = 240 bits (612), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 136/338 (40%), Positives = 195/338 (57%), Gaps = 2/338 (0%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A D+ +AV G M+G A G +GA A+ INA G + KL+ DDACDPKQAV Sbjct: 39 AKDVYIAVAGPMTGSTAALGAQIRDGAAAAVDSINASGLLPDTKLILRIADDACDPKQAV 98 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 AVAN++ DGIK V+GH CSSS+ PASDIY + ++ ISPG+TNP LT+RG + R G Sbjct: 99 AVANRLTTDGIKLVVGHFCSSSSIPASDIYAEAEVIQISPGSTNPRLTERGLTTLFRICG 158 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D QG AA YI+ + ++A++ DK G+G+A V+ L+AA + V AGE Sbjct: 159 RDDQQGGVAADYIVRHHQGAKLAVLDDKSTAGKGIADIVESRLRAAGEHTV-RQSYVAGE 217 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 KD++AL++RLK++ I VY GGYY E+G ++RQA + + + + + IAGD Sbjct: 218 KDYTALVSRLKRDGIQIVYIGGYYNEIGLIVRQAVEASARLTVIANDPLMTSDFVAIAGD 277 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 AA G L T ++ A V LK +G Y YAAVQ+ A +++R G+ + Sbjct: 278 AANGTLFTFMPDPTKNAAGAAAVARLKGSSLSAAG-YTLYAYAAVQAWADSVKRAGTFDG 336 Query: 323 LALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 + + L++ T IG + +D KGD F V++W Sbjct: 337 IRVAAALRSGSIQTAIGTVRFDSKGDNAAPGFVVYRWR 374 >UniRef50_B8J0V3 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0V3_DESDA Length = 376 Score = 217 bits (553), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 121/361 (33%), Positives = 200/361 (55%), Gaps = 4/361 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK+ + A + ++ A A+D IK+ V GA SG +A +G N A+ I D+NAK Sbjct: 1 MKKGITLLAAMALCAVLAAPAQAEDTIKIGVAGAHSGDLASYGVPSLNAAKVVIADVNAK 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GGI G ++ V DD C P+ A A K+++D + V+GH+CS +T+ +Y D I+ Sbjct: 61 GGILGKQVELVAQDDQCKPELATNAATKLISDKVAVVMGHICSGATKATLPLYTDAKIVS 120 Query: 120 ISPGATNPELTQRGYQ-HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 +SP AT P LT+ G + RT D +Q + ++L +K +++A +HD YG+G Sbjct: 121 MSPSATTPGLTEDGNNPYFFRTIANDKAQARLTSDFMLNNLKVKKVAYLHDNGDYGKGFV 180 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + ++ L+ A V F+ IT DFSA++ +L++E D V +GGY P ++L+Q R Sbjct: 181 DNNREHLEKAGVKTVLFEAITPDAVDFSAVVRKLRREQPDIVVFGGYQPTASKLLQQMRR 240 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDA-LKADKKDPSG 297 + T +GP+G+ + + +AG A+EG+ + PK PA + + +K KDP G Sbjct: 241 DRVTTALLGPDGLMDEAFIKMAGKASEGVYSSYPKDTSNLPAYRAAREGHVKMFGKDP-G 299 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 + + YAA Q+L A+E+ GS + +V L++ +T +G L + + GD G ++ Sbjct: 300 SFYYNGYAATQALVNAIEKAGSTDTAKVVDALRSAPVDTPLGTLTFSKTGDAAGMALSIY 359 Query: 358 Q 358 Q Sbjct: 360 Q 360 >UniRef50_B8FN98 Extracellular ligand-binding receptor n=12 Tax=Bacteria RepID=B8FN98_DESAA Length = 401 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 120/342 (35%), Positives = 196/342 (57%), Gaps = 15/342 (4%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA-KGGIKGDKLVGVEYDDACDPKQAVAV 84 +K+AV GA +G +A +G A ++ +NA +GG+ G K++ V DDAC P+ A Sbjct: 55 LKLAVAGAHTGDLASYGIPSVRAAEILVEHVNATQGGVGGRKVILVTEDDACKPEMATNA 114 Query: 85 ANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG-YQHIMRTAGL 143 A K+V + + V+GH+CS +T+ A IY+D GI+ ISP ATNP+LTQ G Y + RT Sbjct: 115 ATKLVGEDVDLVVGHICSGATKAALGIYKDSGIIAISPSATNPDLTQSGDYPNFFRTIAS 174 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGL-KAANANVVFFDGITAGE 202 D +Q + L+ + +IA++HDK YG+GLA + L ++ A VV ++GIT G Sbjct: 175 DDAQARLEVDFALDVLGLTKIAVLHDKGDYGKGLAEFAKKFLEESGKAEVVLYEGITPGG 234 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 D+SA++ ++ + V +GGY+PE +++ Q R + T F+ +GV + + +AGD Sbjct: 235 MDYSAVVQKINRSGAQAVIFGGYHPEASKIVMQMRKKDMDTIFISDDGVKDDTFIKVAGD 294 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADK------KDPSGPYVWITYAAVQSLATALER 316 AEG+ T PK ++P A++ADK + G + Y+AV +L A+++ Sbjct: 295 YAEGVYATGPKDTSKNPL------AVEADKLHKEKYGEDYGAFYLNAYSAVLALFNAVDK 348 Query: 317 TGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 +GS + A+ L+ T +G + +D++GD G F V+Q Sbjct: 349 SGSTDYEAVSNALRNEYVATPLGIIKFDDRGDAIGVGFSVYQ 390 >UniRef50_Q92ZZ6 ABC transporter, periplasmic solute-binding protein n=6 Tax=Rhizobiaceae RepID=Q92ZZ6_RHIME Length = 363 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 113/335 (33%), Positives = 180/335 (53%), Gaps = 1/335 (0%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 ++ + V G MSG +A G GA A+ +INA GG+ G ++ + DD CDP+QA+A Sbjct: 21 EVLIGVAGPMSGKLAWTGTQLRRGAEMAVANINAAGGVLGQQVRLIVADDFCDPRQALAA 80 Query: 85 ANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 A K+V DG +VIGH CS ++ PAS IY G+L ISP +TNP LT++G+ ++ R D Sbjct: 81 AEKLVADGAVFVIGHYCSGASIPASKIYAAAGVLQISPSSTNPMLTEQGHANVFRVCSRD 140 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 +QG A Y+ + +IAI+HD YG+GLA + L + T G+ D Sbjct: 141 DAQGHKAGNYLADHWGDSKIAILHDNTTYGKGLADETKKQLNMRGVTEAVYQSYTPGKDD 200 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 +S +A L+ +I +Y GGY+ E M+R AR Q + + + IAG AA Sbjct: 201 YSVEVAALQTAHIAVLYLGGYHTEAALMVRAARDRAYPVQLISGDDTATEAFGLIAGPAA 260 Query: 265 EGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLA 324 EG L T ++ +V+ +A+ +P + +Y A + A A+ + S + A Sbjct: 261 EGTLFTFVADPRRNAEAAEVVERFRAENFEPDS-WTLHSYGAAEIWAQAVTKANSLDLQA 319 Query: 325 LVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 ++ L+ + +TV+G +++D+KGDL + + W Sbjct: 320 VIAALREDQFDTVLGRIDFDKKGDLTVQSWVWYVW 354 >UniRef50_Q7NI31 Glr2353 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NI31_GLOVI Length = 367 Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 117/341 (34%), Positives = 189/341 (55%), Gaps = 13/341 (3%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 +D + + V G +SGP G+ A++ +N KGG+KG ++ V DD P A Sbjct: 22 SDKVYIGVAGPLSGPQTVQGEYILKAVELAVEQVNVKGGVKGKQIEVVTGDDQAKPLDAT 81 Query: 83 AVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 +VA K+ + +G+ V+GH S + PAS IY ++MI+PG+TNP LT+ G +++ R Sbjct: 82 SVARKLASTEGVMGVVGHFNSGCSIPASSIYNQGNLVMITPGSTNPALTENGLKNVYRIV 141 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 G D QG + L +++ QR+AI+HDK YG+GLA ++ ++ A V FF+GIT G Sbjct: 142 GRDDQQGAVDGDFALRSLQAQRVAILHDKTPYGQGLASFFRETVETGGAEVTFFEGITQG 201 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 ++DF A++ R+K + D ++YGG + E G ++ QAR +G+K++F+ +G S +I G Sbjct: 202 DRDFRAVLTRIKGIDPDTIFYGGVFVEAGLVVSQARELGIKSRFISGDGTKEQSFIDIVG 261 Query: 262 DAAEGMLVTMPKRYDQDPANQGIVDAL--KADKKDPSGPYVWITYAAVQSLATALE---R 316 A + ++ P + N VDA K + ++P GP+ Y A + L A+E Sbjct: 262 KNAGDIYISGPALVN----NAAFVDAYMDKYNNEEP-GPFSPYAYDAARILIAAMESAPE 316 Query: 317 TGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 + A V+ LK N A + G + +D KGD F +F Sbjct: 317 LTREAVAAEVRKLK-NFAG-LAGSITFDAKGDRDKAPFDIF 355 >UniRef50_B6WPS4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPS4_9DELT Length = 355 Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 110/337 (32%), Positives = 187/337 (55%), Gaps = 3/337 (0%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 AD IK+ V GA SG +A +G N A+ I++ NAKGG+ G K+ V DD C P+ A Sbjct: 3 ADTIKIGVQGAHSGDLASYGVPSLNAAKIVIEEANAKGGVLGKKIELVAQDDQCKPELAT 62 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG-YQHIMRTA 141 A K+++D + ++G +CS +T + +YE I+ ISP AT P LT G + +RT Sbjct: 63 NAATKLISDKVVAIMGPICSGATNASLPMYESANIISISPTATTPALTLEGKHPLFLRTV 122 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 D++Q + YI+E +K +++A +HD +YG+G A+ + L+ A V F+ +T Sbjct: 123 ANDNAQAQLTSSYIIEVLKAKKVAYLHDNGEYGKGFAQQNRGILEKAGVETVLFEAVTPD 182 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 DFSA++ +L++ D + +GGY ++++Q R +KT +GP+GV + + + G Sbjct: 183 AVDFSAVVRKLRRAKADVLVFGGYQNTASKLVQQMRRDRVKTPLIGPDGVKDETFLKMTG 242 Query: 262 DAAEGMLVTMPKRYDQDPANQGIVDA-LKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 +EG++ + PK + +A +K +P Y + YAA Q+L A+E GS Sbjct: 243 KDSEGVMASYPKDTSTLAMYKHAREAHVKQFGSEPGFGY-YNAYAATQALIKAIEVAGST 301 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 E ++ LK+ +T +G +++++ GD G V+ Sbjct: 302 ETDKIMAALKSTEVDTPLGKMSFNKAGDATGLGLSVY 338 >UniRef50_B5WAG3 Extracellular ligand-binding receptor n=2 Tax=Burkholderia RepID=B5WAG3_9BURK Length = 400 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 123/353 (34%), Positives = 184/353 (52%), Gaps = 11/353 (3%) Query: 6 KTIIAGMIALAISHTAMAD--------DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 +T +AGM A MA IK+ V +SG A G NGA+ A IN Sbjct: 17 QTTVAGMAAAVTLLVGMAPGSALSQGATIKIGVPVPLSGSSANAGTDIVNGAKLAAARIN 76 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGI 117 A GG+ G ++ V DDACD + AV A K+V+ G+ V G CS++ P S + GI Sbjct: 77 AAGGVLGKQIELVPEDDACDAQTAVQAAQKLVDAGVVAVAGGYCSAAALPESTTFHRAGI 136 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 + +TNP+LT+ GY ++ RT G D QGP AA ++ + + + +A+I D Y +GL Sbjct: 137 PYVLDASTNPQLTEMGYDNVFRTIGRDDQQGPFAASFMKDVLHAKHVAVIDDNTTYSKGL 196 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 A++ LK +VV+ + IT G+ D+S + R+ D +YY GY+ E G ++++AR Sbjct: 197 AQNTVQALKKDGVDVVYANSITPGQMDYSPTLTRVSSLKPDVIYYTGYFSEAGLIVKEAR 256 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTM-PKRYDQDPANQGIVDALKADKKDPS 296 +GLK MG +G + +L AG AA+GM++T P A+ + D KA + P Sbjct: 257 QLGLKMTLMGGDGTNDPTLMKTAGAAADGMIITTAPLAQFLSGAHAYVDDYTKAYGQGP- 315 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGD 348 GPY Y AV A A+ S +P A+ L K + G +++ KGD Sbjct: 316 GPYSVYEYDAVGVTAKAIADAKSAQPAAITAALHKISNYPGATGTIDFTPKGD 368 >UniRef50_B1LX36 Extracellular ligand-binding receptor n=11 Tax=Alphaproteobacteria RepID=B1LX36_METRJ Length = 378 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 121/362 (33%), Positives = 186/362 (51%), Gaps = 3/362 (0%) Query: 8 IIAGMIALAI-SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 +IA + LA+ + A D+ + V SGP G+ G A +D NA GG+ G Sbjct: 17 LIALSLCLALLPASRAAADVVIGVAVPRSGPYVAVGEQVLRGVEAAARDANAMGGLDGQP 76 Query: 67 LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATN 126 + DDACD A+AVAN V ++ V+GH+CS+++ ASDIY G++MI+ + Sbjct: 77 VTLDVQDDACDSNTAMAVANHFVRSNVRLVVGHVCSNASIAASDIYAQNGVVMITAASVA 136 Query: 127 PELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLK 186 LT RG +I R G D Q +A + E + ++IA+I D+ LA + +D L Sbjct: 137 ARLTDRGLPNIFRVCGRDDDQARLSAAVLAERFRDRKIALIQDQTPAARSLAAATKDNLN 196 Query: 187 AANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 246 N F + + D +AL RLK I+ VYYGG EMG++++ A G + Q+ Sbjct: 197 RIGVNEALFLSFSPSDADDAALADRLKSAGIEVVYYGGDAAEMGRLVKIAADRGFRPQWF 256 Query: 247 GPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAA 306 G + + IAG A+ G+L+T + PA +V A KA+ DP+G ++ YAA Sbjct: 257 GTSAIATPDFAKIAGSASNGVLMTFYLDPSRQPAAAAVVKAFKAEGVDPTGSTIY-GYAA 315 Query: 307 VQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 +Q+L A S EP + + L + V+G + +D KGD+ + ++ W DGS T Sbjct: 316 MQALVAAGNFAHSTEPRPIAQALHTERFDLVLGTVGFDAKGDVTAQGYVLYVWK-DGSFT 374 Query: 367 AA 368 A Sbjct: 375 PA 376 >UniRef50_A4JSR3 Extracellular ligand-binding receptor n=11 Tax=cellular organisms RepID=A4JSR3_BURVG Length = 383 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 114/338 (33%), Positives = 182/338 (53%), Gaps = 6/338 (1%) Query: 26 IKVAVVGAMSGPIAQWG-DMEFNGARQAIKDINAKGGIKGDKLVGVEYD---DACDPKQA 81 +K+ VG ++GP+A+ G D+++ GA+ A+ + NA+ G K V D D DP+ A Sbjct: 30 VKIGFVGPLTGPVARVGKDLQY-GAQLALDEENARHPTIGGKPVTFVLDVQDDQADPRVA 88 Query: 82 VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 + VA K+V+DG+ VIGH S + PAS +Y + MI+PG+TNP+LT++GY+++ RT Sbjct: 89 IQVAQKLVDDGVVGVIGHYNSGCSIPASTVYHQANVAMITPGSTNPQLTKQGYKNVFRTM 148 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 G D G A +++E +K +RI II D+ +G+GLA + + G+K AN VV + Sbjct: 149 GHDGIGGVVAGHFVVEQMKAKRIGIIDDRTAFGQGLADAFEKGVKEANGYVVDREFTNDK 208 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 DF A++ LK +N+D +++GG + +++Q RS+G+ Q G + + + IAG Sbjct: 209 AVDFRAILTTLKSKNVDLIFFGGLDEQGAMLVKQMRSLGMPAQLFGAGALKSNAFLQIAG 268 Query: 262 DAAEGMLVTMP-KRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 AA+G P D+ PA Q KA Y Y A +L A+ S Sbjct: 269 AAADGTQDLEPGPALDKLPAAQQFGKRYKARFNQDVELYAPFAYDAALALIKAIHSADSL 328 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 + +V +L V G + +D GDL + +FQ Sbjct: 329 DRGKIVDNLSKVTVTGVTGKITFDPYGDLIKPPYTLFQ 366 >UniRef50_D1U8G6 Extracellular ligand-binding receptor n=2 Tax=Desulfovibrio RepID=D1U8G6_9DELT Length = 383 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 116/337 (34%), Positives = 178/337 (52%), Gaps = 8/337 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG-DKLVGVEYDDACDPKQAVAV 84 +K+ + ++GP A G+ G A+ + A+GGI G +V V D ACDPKQAVA Sbjct: 33 LKIGTLSPLTGPYAADGNDIKQGTEAAVAVMKAQGGIPGYTDIVVVPTDSACDPKQAVAA 92 Query: 85 ANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 ANK++ND + VIG CSS+T PAS+ +E I+MI+P +T+P +T+RG ++ RT G D Sbjct: 93 ANKLINDKVPAVIGAYCSSATIPASETLAEENIIMITPASTSPTVTERGLPYMFRTCGRD 152 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 Q P A K++ E + + I+ DK Y +G+A V K A V+ D + G+KD Sbjct: 153 DHQAPAAVKFMKEVENVKTVFIVDDKTTYSQGMADGVAAAAKEAGIEVLGHDHVNQGDKD 212 Query: 205 FSALIARLKKENIDFVYYGGYYPEMG-QMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 FSA++ +K +N D Y G M+ QAR +G+ MG + V + L A Sbjct: 213 FSAVLTMVKDKNPDLFYISLQNSSSGATMVIQARRMGITAILMGQDAVYHPKLIEFAKAD 272 Query: 264 AEGMLVTMPKRYDQDPANQGIVD--ALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 +EGM T D D QG D A + K G Y +Y + + A++ G+ + Sbjct: 273 SEGMFCTFG---DIDTDTQGYKDFKANYSSKYSEPGAYSAYSYDSAMAYMLAVKAAGTTD 329 Query: 322 PLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 P + ++L + +++DEKGD G ++ V+Q Sbjct: 330 PAKVREELLKLSFDGASKKVSYDEKGD-SGSNYTVYQ 365 >UniRef50_Q4G268 HmgD n=1 Tax=Pseudomonas putida RepID=Q4G268_PSEPU Length = 382 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 125/374 (33%), Positives = 195/374 (52%), Gaps = 31/374 (8%) Query: 7 TIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 T + ++A+ ++ A ++ +++ G ++GP A G +G + A+++ N + GDK Sbjct: 13 TAVTLLMAMGTANAADSEVVRIGFAGPLTGPSAHQGQDVEHGIQIAVEEANQQQLKIGDK 72 Query: 67 LVG---VEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 + V DD DP+ AVA ++V+ + VIGH S ++ PAS IY GI ISP Sbjct: 73 VAQFKLVSEDDVADPRTGTAVAQRLVDSKVAVVIGHYNSGTSIPASKIYAAAGIPQISPS 132 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183 ATNP LTQ+G + RT D++ G A Y++ +K QRIAI D+ YG+GLA V Sbjct: 133 ATNPTLTQQGIPSVFRTVNDDATLGRYAGNYLVSQLKAQRIAIFDDRTAYGQGLADEVTR 192 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 +KAA NVV + DF+A++ K + D V++ + M +Q +++GLK Sbjct: 193 AVKAAGGNVVVREYTNDKSTDFNAILTTAKAQKADAVFFAALDYQAAPMAKQMKNLGLKA 252 Query: 244 QFMGPEGVGNASLSNIAGDAAEGM--------LVTMPK--RYDQ---DPANQGIVDALKA 290 +FM + N S +AG AAEG L+ MPK ++Q D G+V Sbjct: 253 RFMNIGNLPNDSFKQMAGSAAEGTYAWNYGTPLLDMPKGAAFEQKLKDKFGVGVVQ---- 308 Query: 291 DKKDPSGPYVW-ITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDL 349 S P + T+AA+ A+ + GSD+P + LK+ + V G + +D+KG+L Sbjct: 309 -----SSPAAYDATWAAIN----AMVKAGSDDPKVYLPVLKSQSYDGVTGTIAFDDKGNL 359 Query: 350 KGFDFGVFQWHADG 363 K VFQ+ ADG Sbjct: 360 KNPAATVFQF-ADG 372 >UniRef50_B2JSU3 Extracellular ligand-binding receptor n=2 Tax=Burkholderia RepID=B2JSU3_BURP8 Length = 382 Score = 180 bits (457), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 118/375 (31%), Positives = 195/375 (52%), Gaps = 15/375 (4%) Query: 1 MKRNAKTIIAGMIALA----ISHTAMADDIKVAVVGAMSGPIAQWG-DMEFNGARQAIKD 55 M R + + ALA + A + +K+ VG ++GP+A+ G D+++ GA+ A+ + Sbjct: 1 MNRRTWLLRLAVCALAAQTSFAFAADPETVKIGFVGPLTGPVARVGKDLQY-GAQLALDE 59 Query: 56 INAKGGI---KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIY 112 NAK K K V DD DP+ A+ VA K+V+DG+ VIGH S + PAS +Y Sbjct: 60 ENAKQPTIAGKPVKFVLDVQDDQADPRVAIQVAQKLVDDGVVGVIGHYNSGCSIPASAVY 119 Query: 113 EDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ 172 + + MI+PG+TNP+LT++G++++ RT G D G A +++E +K +RI II D+ Sbjct: 120 HNANVAMITPGSTNPQLTKQGFKNVFRTMGHDGIGGVVAGHFVVEQMKAKRIGIIDDRTA 179 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 +G+GLA + + G+K AN N+V + DF A++ LK +N+D +++GG + + Sbjct: 180 FGQGLADAFEKGVKEANGNIVSREFTNDKAVDFRAILTSLKSKNVDVIFFGGLDEQGAML 239 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDALKAD 291 ++Q RS+G++ Q G + + + IAG + E P D+ PA Q KA Sbjct: 240 VKQMRSLGMQAQLFGAGALKSNAFLQIAGASGERTQDLEPGPALDKLPAAQDFGKRYKAR 299 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKG 351 Y Y A ++ A+ S + +V+ L V G + +D GDL Sbjct: 300 FNQDVELYAPFAYDAALAMIKAIHDANSLDRQKIVESLAKVSLTGVTGKITFDPYGDLIK 359 Query: 352 FDFGVF-----QWHA 361 + +F QW + Sbjct: 360 PPYTLFEVQQGQWKS 374 >UniRef50_C6BVT9 Extracellular ligand-binding receptor n=3 Tax=Deltaproteobacteria RepID=C6BVT9_DESAD Length = 377 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 109/325 (33%), Positives = 175/325 (53%), Gaps = 4/325 (1%) Query: 1 MKRNAKT-IIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MKR+ T ++ I + + A +KV +G ++GP A G+ NG A++ + A Sbjct: 1 MKRSMMTALLVAAILMLSAGMVFAKTLKVGTMGPLTGPYAADGNDIKNGVLTAVEVVKAN 60 Query: 60 GGIKG-DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G D++V + D AC+P+QAVA ANK++N+ V+G CSS+T PAS++ ++E I+ Sbjct: 61 GGIPGFDEIVVLPQDTACEPRQAVATANKLINEEANGVVGAYCSSATLPASEVLDEESIV 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 MI+P +TN ++T RG ++ R G D QG A K++ E + + + I+ DK Y +GLA Sbjct: 121 MITPASTNEKVTSRGLPYMFRMCGRDDDQGAIALKFMQEKLGAKSVYIVDDKTAYSQGLA 180 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ-MLRQAR 237 V+ AA V+ + + G+KDFSA++ ++K N D Y G ML QA+ Sbjct: 181 DGVEKMCNAAGIKVLGHEHVNQGDKDFSAILTKVKNTNPDVFYMSMQNSATGALMLIQAK 240 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSG 297 +G+K + + V + L IA DAAE + +T + PA + + +P G Sbjct: 241 RMGIKAARLAQDAVYHPQLIEIAKDAAEDVYLTFGYIDSEAPAYKEFYAKYQPKHGEP-G 299 Query: 298 PYVWITYAAVQSLATALERTGSDEP 322 Y Y + + A+ GS +P Sbjct: 300 AYSGYAYDSAMAYFKAVTAAGSTDP 324 >UniRef50_A1KBY9 Probable leucine-specific binding protein n=2 Tax=cellular organisms RepID=A1KBY9_AZOSB Length = 374 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 108/332 (32%), Positives = 173/332 (52%), Gaps = 9/332 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY---DDACDPKQAV 82 +K+ G ++GPIA +G GAR A++D NA+G G + V E DD DP+ A Sbjct: 27 VKIGHAGPLTGPIAHFGKDGEMGARLAVEDANARGITLGGQKVKFELVSEDDQGDPRTAT 86 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 VA ++ + G+K V+GH+ S ++ PAS +YE G+ +++P +T+P+LT++GY+ R Sbjct: 87 TVAQRLTDLGVKGVVGHVTSGASIPASRVYEQAGVPVVTPSSTSPKLTRQGYKVTFRVIA 146 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D QG AKY ET+K ++AII D+ YG+GLA + D K VV + T Sbjct: 147 NDLQQGEATAKYAAETLKAAKVAIIDDRTAYGQGLADAFADAAKQRGLQVVGREFTTDKS 206 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DF A++ ++K + D V+YGG + MLRQ R +G ++G +GV + +AGD Sbjct: 207 TDFLAILTKIKAKAPDAVFYGGMDAQAAPMLRQLRQLGSSAIYLGGDGVCTGEMIKLAGD 266 Query: 263 AAEGML----VTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 A + ++P + P + K K Y +Y A +L A++ Sbjct: 267 AMSDKVYCSQASLPPA--KMPGGTDFLSRFKQRYKADVLLYAPYSYDAATALIEAMKAAD 324 Query: 319 SDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 S EP + L+ V G + +D +GD++ Sbjct: 325 SSEPAKYLPALQRVAFKGVTGEIAFDPQGDIR 356 >UniRef50_Q316T7 Amino acid ABC transporter, periplasmic-binding protein n=12 Tax=Deltaproteobacteria RepID=Q316T7_DESDG Length = 393 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 117/370 (31%), Positives = 187/370 (50%), Gaps = 7/370 (1%) Query: 1 MKRNAKTIIAGMIA-LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M R + G++A + ++ TAMA +K+ ++ ++G A G N + NA+ Sbjct: 20 MSRKMTAFVLGVVATVLMAGTAMAGTVKIGLMCPLTGSWASEGQDMRNIVLMLAEQTNAQ 79 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GGI GD + V DDA DPK A A ++ G+ VIG S+ T+ + IY++ I+ Sbjct: 80 GGINGDMVEIVVEDDAGDPKTAALAAQRLSTMGVSAVIGSYGSAITEASQAIYDEMDIVQ 139 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 ++ G+T LT++G RT D QG AA +L+ ++IAI+HD Y +GLA Sbjct: 140 VATGSTAIRLTEKGLPLFFRTCPRDDEQGRVAAA-VLKEKGYKKIAILHDNTSYAKGLAE 198 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 LK+A VVF+D +T E+D+SA++ +LK D +++ GYYPE G +LRQ + + Sbjct: 199 ETLTLLKSAGTEVVFYDALTPNERDYSAILTKLKAAGPDAIFFTGYYPEAGMLLRQKQEM 258 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP- 298 MG + N L IAG +A G L P P Q A + + P Sbjct: 259 KWDVPMMGGDATNNLDLVKIAGKSAAGFLFISPPTLQDLPDKQAKDFAAAYKARYGTMPA 318 Query: 299 YVWITYA--AVQSLATALERTGSDEPLALVKDLKANGANT--VIGPLNWDEKGDLKGFDF 354 VW A A +L A+ GS +P + +K + + + G L+++EKGD G + Sbjct: 319 SVWSVLAGDAFIALKAAITGAGSTDPQDIAAYMKKDLKDLPGLTGSLSFNEKGDRVGDLY 378 Query: 355 GVFQWHADGS 364 +++ +G+ Sbjct: 379 RLYRVDENGN 388 >UniRef50_A3RVH7 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=5 Tax=Betaproteobacteria RepID=A3RVH7_RALSO Length = 393 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 107/340 (31%), Positives = 172/340 (50%), Gaps = 6/340 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY---DDACDPKQAV 82 +++ G ++G A WG NGAR A++D+N KG + G K V E DD DP+QA+ Sbjct: 45 VRIGNAGPLTGGAAHWGKDNENGARLAVEDLNKKGLVIGGKKVRFELLSEDDQADPRQAM 104 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 VANK+ + G+K ++GH S + PAS IY GI IS ATNP+LTQ+G+ + R Sbjct: 105 VVANKLADSGVKAMLGHFNSGAAIPASAIYARAGIPDISV-ATNPQLTQQGFGNTFRIVA 163 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D G +++ ++ + +R+AII D+ YG+G A +K A +V + Sbjct: 164 SDDDVGVALSRFAVKALNAKRVAIIDDRTAYGQGAAEVFAKEVKGLGATLVSQQYTSDKA 223 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DF A++ +K + D ++YGG + G + RQ + +G+ + +G +G+ ++ I+ Sbjct: 224 TDFMAILTAIKSKRPDVIFYGGMDAQGGLIARQMKQLGIGAKLLGTDGLCTGEVAKISAG 283 Query: 263 AAEGMLVTMP--KRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 A G L K D P KA Y Y ++ ++A A++ S Sbjct: 284 AVNGTLYCTRGGKALDTMPNGADFARRYKARFGTDVLNYAPYLYDSLMTVAAAMQAADSV 343 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 EP + L + + GP+ +DEKG+LK F VF + Sbjct: 344 EPPRYLGALARIRHDGITGPVAFDEKGNLKNPGFTVFTYQ 383 >UniRef50_Q47JF2 Extracellular ligand-binding receptor n=142 Tax=Betaproteobacteria RepID=Q47JF2_DECAR Length = 460 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 113/346 (32%), Positives = 178/346 (51%), Gaps = 21/346 (6%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY---DDACDPKQAV 82 +K+ V M+GP A G NGA AI+++NAKG G V + DDA DPKQ Sbjct: 43 VKLGHVAPMTGPQAHLGKDNENGAALAIEELNAKGLEIGGAKVKFQLLAEDDAADPKQGA 102 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 VA K+V+ + VIGHL S +T PAS +Y D GI IS ATNP+ TQ+G++ R Sbjct: 103 IVAQKLVDAKVNGVIGHLNSGTTIPASKLYSDAGIPQISGSATNPKYTQQGFKTAFRVMA 162 Query: 143 LDSSQGPT----AAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 D QG AAK ++TV A++ D+ YG+GLA + +A+ VV + Sbjct: 163 NDVQQGRALGEFAAKQGVKTV-----AVVDDRTAYGQGLADEFKKAAEASGLKVVATEYT 217 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 DF A++ ++K + V+YGG + G M +Q + +G+K +F+G +GV Sbjct: 218 NDKATDFKAILTKIKSTKAELVFYGGMDAQGGPMAKQMKELGIKAKFLGGDGVCTPEFMK 277 Query: 259 IAGDAAEGMLVTMP----KRYDQDPA-NQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 + G+A EG ++P ++ + P + A+ + PYV Y AV +A + Sbjct: 278 LGGEATEGNFCSLPGQPLEKLAKGPEFREKFTKKFNAEIQ-LYAPYV---YDAVMVMADS 333 Query: 314 LERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 ++R S +P+ + + + V + +D +GDLKG ++Q+ Sbjct: 334 MKRADSVDPVKFLPAIGQTKYDGVTALIEFDPQGDLKGGAISIYQY 379 >UniRef50_Q39AQ6 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=92 Tax=cellular organisms RepID=Q39AQ6_BURS3 Length = 428 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 111/349 (31%), Positives = 175/349 (50%), Gaps = 10/349 (2%) Query: 9 IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLV 68 +A AL+ +H AD +K+ ++GP + +G G + AI D NA G K V Sbjct: 60 LAAACALSGAHAIAADVVKIGFAAPLTGPQSNYGTDMQKGVQLAIADFNATRPTIGGKPV 119 Query: 69 GVEYD---DACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT 125 + D D DP+ VA ++++D ++ +IGH S ++ PASD+Y+ G+ IS AT Sbjct: 120 TFQLDSQDDQADPRTGTTVAQRLIDDNVRGIIGHFNSGTSIPASDLYDRAGLPQIS-MAT 178 Query: 126 NPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGL 185 +P+ T RGY+ R D+ G Y ++T++ +RIAII D+ YG+G+A + Sbjct: 179 SPQYTARGYKTTYRLLTSDAQAGRIVGTYAVKTLRFKRIAIIDDRTAYGQGIADEFAKAV 238 Query: 186 KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQF 245 +AA ++ D DFSA++ LK N D ++YGG + M+R+ R +G+K+ F Sbjct: 239 EAAGGTIIKRDFTNDKALDFSAILTNLKGMNPDAIFYGGGDAQSSPMIRKMRQLGMKSAF 298 Query: 246 MGPEGVGNASLSNIAGDAAEGMLVTM---PKRYDQDPANQGIVDALKADKKDPSGPYVWI 302 + E + + + GDAAEG +V M PK ++ P G KA + Y Sbjct: 299 VTGEMSRSPTFLKVGGDAAEGAIVYMGGLPK--EKMPGFSGYAARYKARFNEDVITYSPY 356 Query: 303 TYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP-LNWDEKGDLK 350 Y +L TA++ S +P L V P + +D KGDLK Sbjct: 357 AYDGTIALLTAMKDANSTDPKVYTPYLGKLSVKGVSAPSIAYDTKGDLK 405 >UniRef50_B2JW90 Extracellular ligand-binding receptor n=1 Tax=Burkholderia phymatum STM815 RepID=B2JW90_BURP8 Length = 375 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 124/376 (32%), Positives = 188/376 (50%), Gaps = 29/376 (7%) Query: 6 KTIIAGM-IALAISHTAMADDI-KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GI 62 K ++AG+ +ALA S T +AD + K+ V G ++G A G GAR A++D+NAK + Sbjct: 7 KMLVAGLGVALA-SATVLADTVVKIGVAGPLTGSQAASGKDNERGARLAVEDLNAKHMTL 65 Query: 63 KGD--KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G K + DD DPK V VA K+V++G+ VIGH S T PAS IY D ++MI Sbjct: 66 NGQPLKFELISVDDQSDPKAGVTVAQKLVDNGVLAVIGHWNSGVTIPASKIYNDAKVIMI 125 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 +P A+NP LT GY ++ R D+ G A Y T+ +R+A+I D+ YG G+A Sbjct: 126 TPAASNPALTVPGYPYVFRLTTDDNVLGAKMADYAANTLHLKRVAVIDDRTAYGAGVADV 185 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 K ++V + T DF A+++R+K E ++YGGYY + + RQ R +G Sbjct: 186 FASTAKKQGIDIVAREYATDHTVDFKAVLSRVKLEKPQAIFYGGYYGQAAYLARQMRDLG 245 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGM---------LVTMP--KRYD-QDPANQGIVDAL 288 + MG +G+ +A A + L +P KR++ + A G+ Sbjct: 246 INAVLMGGDGLCVGEFPKLADGALDKKMYCPQGGVPLAALPDGKRFEGRFKAAYGV---- 301 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 D+K PS YAA + A+ + S L K L NT+ G + +D++G+ Sbjct: 302 DPDQKAPS------FYAATMMMGAAIAKAQSLSAETLDKTLHQTTFNTLFGQVRFDQRGE 355 Query: 349 LKGFDFGVFQWHADGS 364 V+ W A GS Sbjct: 356 WIKAPMTVY-WSAGGS 370 >UniRef50_Q5SIN9 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=2 Tax=Thermus thermophilus RepID=Q5SIN9_THET8 Length = 387 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 110/371 (29%), Positives = 191/371 (51%), Gaps = 11/371 (2%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R ++AG+ AL ++ A ++ IK+A + +SGP A G+ GA A+++ + Sbjct: 2 RKIGFLVAGVAALGLA-LAQSNVIKIATMSPLSGPQAALGEQIKLGAELAVEEAKERFKA 60 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 G +LV V YDD +P VA AN+++ND I ++G L S PAS++ ++M+S Sbjct: 61 LGFELVLVPYDDQANPDVGVANANRMINDPDILGLVGTLNSGVAIPASEVLARVNLVMVS 120 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 P TNP +T R ++ R G D QGP AA+++ +K +R+ +IHDK YG+GLA Sbjct: 121 PANTNPVVTDRKLPNVNRIVGRDDVQGPAAAEFVYNDLKLRRVFVIHDKTAYGQGLAEEF 180 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + +A VV F G T + +F +I +++ +N VY+GG Y ++G +Q R GL Sbjct: 181 RKRFEALGGRVVAFIG-TEEQSNFVPIINQIRAQNPQLVYFGGIYSQIGPFTKQLRERGL 239 Query: 242 KTQFMGPEGVGNASLSNIAG--DAAEGMLVTMPKRYDQDPANQGIVDALKADK-KDPSGP 298 + M +G+ ++ +AG +A T+ P + + + KA KD G Sbjct: 240 RMPLMSGDGLDSSEFERLAGSQNAKGAYYTTVAGPVSAFPQAKALAERFKAKYGKDIEGF 299 Query: 299 YVWITYAA---VQSLATALERTGSDEPL--ALVKDLKANGANTVIGPLNWDEKGDLKGFD 353 ++ AA + +L A++ G +P + ++++ + G + +D KGD++ Sbjct: 300 GIYAYDAARVILAALENAIKANGGKKPTRAQVAQEVRKVKLEGITGTIEFDSKGDIQKAK 359 Query: 354 FGVFQWHADGS 364 + V Q G+ Sbjct: 360 YFVMQVAGTGN 370 >UniRef50_B7AA03 Extracellular ligand-binding receptor n=3 Tax=Thermaceae RepID=B7AA03_THEAQ Length = 389 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 115/373 (30%), Positives = 191/373 (51%), Gaps = 13/373 (3%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R ++AG+ AL ++ A+ IK+A +SGP A G+ GA AI++ + Sbjct: 2 RKVGFLVAGVAALGMA-LGQANVIKIASQSPLSGPQAALGEQIKLGAELAIEEAKPRFKA 60 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 G L V YDD +P VA AN+I+ND I V+GHL S P+S++Y ++M+S Sbjct: 61 LGFDLQFVPYDDQANPDVGVANANRIINDPDILGVVGHLNSGVAIPSSEVYARVNLVMVS 120 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 P TNP +T R ++ R G D QGP A+Y +K + + IIHDK YG+GLA Sbjct: 121 PANTNPRVTDRKLPNVNRICGRDDVQGPVGAEYAFNNLKVKNVFIIHDKTAYGQGLAEEF 180 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLK--KENIDFVYYGGYYPEMGQMLRQARSV 239 + L+A V F G T + +F +I +++ + + +Y+GG Y ++G ++Q R Sbjct: 181 KKRLEALGGKAVAFVG-TEEQSNFVPIINQIRGARPVPELIYFGGIYSQIGPFVKQLRER 239 Query: 240 GLKTQFMGPEGVGNASLSNIAG--DAAEGMLVTMPKRYDQDPANQGIVDALKADK-KDPS 296 G+KT+ MG +G+ ++ L +AG +AA T+ P + + K K+ Sbjct: 240 GVKTRLMGGDGLDSSELVRLAGKENAAGTFYTTVAGPVSAFPKAKAVAQKFKQKYGKEIE 299 Query: 297 GPYVWITYAA---VQSLATALERTGSDEPL--ALVKDLKANGANTVIGPLNWDEKGDLKG 351 G ++ AA + +L A++ G +P + ++++ + G + +D+KGD K Sbjct: 300 GFGIYAYDAANVILAALENAIKAAGGKKPTREQVSQEVRKVKMEGLTGTIEFDDKGDNKK 359 Query: 352 FDFGVFQWHADGS 364 + V Q A G+ Sbjct: 360 AKYFVMQVAATGN 372 >UniRef50_Q39HK1 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=30 Tax=cellular organisms RepID=Q39HK1_BURS3 Length = 404 Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 115/364 (31%), Positives = 191/364 (52%), Gaps = 21/364 (5%) Query: 10 AGMIALAISHTAMADDIKVAVVG---AMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 A ++ +A S A AD V ++G ++G +A G N AR AI++IN++ + G K Sbjct: 35 ATVVLVAASMQARADTPSVVLIGHAAPLTGQLANMGKDSENAARLAIEEINSRQPVVGGK 94 Query: 67 LVGVEYD---DACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 V + D DA DP+ VA K+V+DG+ V+G + S + PAS IY D + IS G Sbjct: 95 PVRFQLDSQDDAADPRTGTQVAQKLVDDGVVAVVGDINSGVSIPASRIYNDAHVTQISQG 154 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183 +TNP TQ+GY+ R D+ QGP A+Y + T+ +R+A+I D YG+GLA + Sbjct: 155 STNPVFTQQGYRTTYRLVATDAMQGPALARYAIATLGAKRVAVIDDSTAYGQGLANEFEK 214 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 KA+ A VV + DF A++ ++K D + YGG G +++QA ++G++ Sbjct: 215 AAKASGAQVVTREATNDKAIDFRAILTKIKGLQPDVIMYGGSDATAGPLVKQAANLGIRA 274 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVT--------MPKRYDQDPANQGIVDALKADKKDP 295 + +G +G + +AGDA + ++ + MPK QD N+ + A + D Sbjct: 275 RVLGGDGACTDKMIGLAGDAIDNLVCSEAGLALSKMPK--GQDFNNRYV--ARYNAQIDA 330 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFG 355 P+ Y AV + A++R GS + ++ + A + V G + +D +GDLK Sbjct: 331 YAPF---AYDAVYVIYDAIKRAGSTDRAKVLAAMPATQYDGVTGRIAFDSRGDLKNAAIT 387 Query: 356 VFQW 359 ++++ Sbjct: 388 IYRF 391 >UniRef50_D2AV85 ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AV85_STRRD Length = 389 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 114/341 (33%), Positives = 168/341 (49%), Gaps = 5/341 (1%) Query: 21 AMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 A ADD I + ++ SG A G N A+ A+ +INAKGG+ G KL DDACD + Sbjct: 36 ATADDPIVLGMLIPQSGSEAAIGPYMSNAAQLALDEINAKGGVLGRKLELKTADDACDAQ 95 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A A ANK+V +G+ +G CS +T P I+ I MI P A + EL + +H+ Sbjct: 96 SAAAGANKLVTEGVDISVGGYCSGATLPTLPIFGKANIPMIIPAANSQELVDQKLKHVFL 155 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKA-ANANVVFFDGI 198 G S Q A K+I + + + ++HD Y + +A + L A A A V + + Sbjct: 156 INGTGSQQAGAAEKWIAKQ-DAKSVVLMHDNTSYSKDIALRTKALLDAPAGAEAVLVETV 214 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 T E D+SA I + + DFVY+ GY+ E G + RQ R G K M +G + L Sbjct: 215 TPKESDYSANITNVLAKKPDFVYWTGYFQEGGLIARQLRQAGYKGSIMVGDGSVSPKLVE 274 Query: 259 IAG-DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERT 317 IAG +AAEG+ TM + D +G + A K GPY Y AV+ A A+ + Sbjct: 275 IAGAEAAEGLYATMTQTPDTLEGAEGWIAAYKKKYNADPGPYSNQAYDAVRLAAEAVTKA 334 Query: 318 GSDEPLALVKDLKA-NGANTVIGPLNWDEKGDLKGFDFGVF 357 G + ++ L+A +G + GPL + + L F + Sbjct: 335 GGTDGAKVISALEAIDGFSMFSGPLKFTPEHTLSNGGFQIL 375 >UniRef50_A9BYU2 Extracellular ligand-binding receptor n=2 Tax=Comamonadaceae RepID=A9BYU2_DELAS Length = 376 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 125/391 (31%), Positives = 191/391 (48%), Gaps = 41/391 (10%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 MK + K IA ++A + AMA + I++ +G +SGP A +G NG R AI ++NA Sbjct: 1 MKMSRKLCIAAVVA-GMGGVAMAQEQVIRIGHIGPVSGPQANFGKDNENGVRMAIDELNA 59 Query: 59 KG-GIKGDKLVG--VEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDE 115 KG I G K+ V DD DPKQ A A K+ +D + + L S P+S +++D Sbjct: 60 KGMEIAGKKVKFQLVAEDDVADPKQGTAAAQKLCDDKVAGAVAFLNSGVAIPSSKVFQDC 119 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 GI MI+ ATNP+LT+ G+ R D++ G AKY ET+K + +AII D+ YG+ Sbjct: 120 GIPMITGAATNPDLTKPGWNTTYRVIANDNALGAALAKYAAETLKLKTVAIIDDRTAYGQ 179 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GLA + + VV + DF A++ +K + + ++YGG Y + G MLRQ Sbjct: 180 GLANVFKKDAEKLGVKVVASEFTNDKATDFMAILTSIKAKKPEGIFYGGMYGQAGPMLRQ 239 Query: 236 ARSVGLK-TQFMGPEGVGNASLSNIAGDA--------AEG--MLVTMP------KRYDQD 278 +GL ++ G +G+ L+ +A A A+G L MP KRYD Sbjct: 240 MAQLGLNDAKYFGGDGLCVPELAKVAAGAKPLDNVICADGGASLAKMPGGTEWKKRYDAK 299 Query: 279 PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVI 338 Q V PY Y A LA A++R S +P + L+ + V Sbjct: 300 YPGQFQV----------YSPYF---YDATMMLADAMKRANSWDPKVYIPFLQKADYSGVT 346 Query: 339 GPLNWDEKGDLK--GFDFGVFQWHADGSSTA 367 + +++ G++K + VF+ +G TA Sbjct: 347 SKIAFEKNGEMKNPSYTLSVFK---NGQKTA 374 >UniRef50_B8GBD0 Extracellular ligand-binding receptor n=5 Tax=Chloroflexaceae RepID=B8GBD0_CHLAD Length = 814 Score = 154 bits (388), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/246 (36%), Positives = 133/246 (54%), Gaps = 2/246 (0%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+A G +SG A G N AI++IN++ G K V +DD P+ A A Sbjct: 454 IKIATQGPLSGGQAALGTGMKNAVELAIEEINSQLSALGVKFEVVPFDDQAKPEVGSANA 513 Query: 86 NKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 IV+D I V+GHL S A Y++ + M+SP TNP +T+ GY+ R G D Sbjct: 514 KNIVSDADILCVVGHLNSGVALAALPDYKNARLAMVSPANTNPNITEGGYEVAFRVVGRD 573 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QG A K+ E +K + + IIHD YG+G+A + +A V+ F+G T + D Sbjct: 574 DVQGSVAEKFAREELKIKSVYIIHDTTAYGQGVAEFFRKAAEANGIQVLGFEG-TEEKSD 632 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 FSA++ + N D +++GG Y + G RQAR G+ QFMGP+G+ + L+ +AGDA Sbjct: 633 FSAILTPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGLDSEELAKLAGDAV 692 Query: 265 EGMLVT 270 + M T Sbjct: 693 DKMYYT 698 Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 88/246 (35%), Positives = 131/246 (53%), Gaps = 2/246 (0%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+A G +SG A G N A A+K ++ G ++ +DD P+ A A Sbjct: 60 IKIATQGPLSGGQAALGTGMKNAAELAVKQLSGPLAELGFRVELAPFDDQAKPEVGSANA 119 Query: 86 NKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 IV+D I V+GHL S A Y++ + M+SP TNP +T+ GY+ R G D Sbjct: 120 KNIVSDADILCVVGHLNSGVALAALPDYKNARLAMVSPANTNPNITEGGYEVAFRVVGRD 179 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QG A K+ E +K + + IIHD YG+G+A + +A V+ F+G T + D Sbjct: 180 DVQGSVAEKFAREELKIKSVYIIHDTTAYGQGVAEFFRKAAEANGIQVLGFEG-TEEKSD 238 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 FSA++ + N D +++GG Y + G RQAR G+ QFMGP+G+ + L+ +AGDA Sbjct: 239 FSAILTPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGLDSEELAKLAGDAV 298 Query: 265 EGMLVT 270 + M T Sbjct: 299 DKMYYT 304 >UniRef50_B2T1G8 Extracellular ligand-binding receptor n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T1G8_BURPP Length = 387 Score = 153 bits (387), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 107/368 (29%), Positives = 178/368 (48%), Gaps = 15/368 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVG---AMSGPIAQWGDMEFNGARQAIKDIN 57 +KR A +I IA A ++D V +G ++GP A G N AR AI+D N Sbjct: 8 LKRFAGGVIFS-IATLWCQGAQSEDAAVVRIGFAAPLTGPSAADGKEMKNAARLAIEDAN 66 Query: 58 AKGGIKGDKLVGVEY---DDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYED 114 A+ G++ V E DD DP+ A VA + V+ + V+GH S + AS++Y+D Sbjct: 67 ARHPKIGERTVSFELAPLDDQADPRVASQVAQRFVDMSVAGVVGHFNSGCSIAASNVYDD 126 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYG 174 I +SP +T+ T RG + R G D+ G +Y++E + +R+AI+ D+ +G Sbjct: 127 AQIAQVSPSSTSAIYTLRGKKSSFRVVGQDAVAGAELGRYLVEDFQARRVAIVDDRTDFG 186 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 GLA V D + + +V + +T DFSA++ R++ +N D V +GG+ + Q++R Sbjct: 187 AGLADRVSDFIAQRHVAIVAREYVTDKTVDFSAILTRIRSQNADLVVFGGFDAQAAQIVR 246 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP----KRYDQDPANQGIVDALKA 290 + RS G+K G EG NA N+A EG + P R KA Sbjct: 247 RMRSAGMKATLAG-EGFNNAIFLNLARGDGEGTVTIQPGLPLNRMPAKDFASRYEARYKA 305 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 + PY Y A + A+ S + +++ ++ + + GP+ +D+ GDL Sbjct: 306 KLEGFQAPY---AYDATSVIVQAVLAAQSARAVDVLQAVRKTNMDGLTGPIAFDKNGDLA 362 Query: 351 GFDFGVFQ 358 + +++ Sbjct: 363 AAPYTIYR 370 >UniRef50_D1B6I2 Extracellular ligand-binding receptor n=2 Tax=Synergistaceae RepID=D1B6I2_THEAS Length = 382 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 109/356 (30%), Positives = 185/356 (51%), Gaps = 9/356 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAM-ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M+R +A ++ L++ A A+ IK+ ++ M+G A G+ N + A++ +NA Sbjct: 1 MRRFGVLFLAAVMVLSVGAWAFGAEPIKIGLLVPMTGFAAADGESALNSVKLAVEHVNAS 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G K+ V YDDA DPKQAV +A K++N D + V+G S ++ + +++DE I Sbjct: 61 GGVLGRKVQLVYYDDAADPKQAVPLAQKLINQDRVVAVVGGSYSMPSRAVAPVFDDEEIP 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 ++ A +P++T+ Y R L +G AA ++ ++ +R+A++ +G LA Sbjct: 121 FVAAYAIHPDVTKGDYT--FRNGFLGKVEGQAAAYTAVKLLRGKRLAMLTSDNDFGRTLA 178 Query: 179 RSVQDGLKAANANVVFFDGIT--AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 + L NV +T A EKDF A +A++K+ + D ++ GYY + G ML+QA Sbjct: 179 EGFKTYLNKYAPNVPLVASLTYPASEKDFKAYLAKIKEADPDVIFASGYYFQTGPMLKQA 238 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEG-MLVTMPKRYDQDPANQGIVDALKADKKDP 295 R +G+ Q +G EG + IAG AAEG ++VT R D P Q + +A K Sbjct: 239 REMGIIAQIIGEEGADSPKTIEIAGKAAEGFVIVTNLNRDDPRPVVQKFLKEYRARYKVE 298 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLN-WDEKGDL 349 Y A + A+ R GS + A+ + K + N + G + +D +G++ Sbjct: 299 PDMVGASAYDAFMIIVEAIRRAGSADRKAIRDAIAKTSAYNGLTGIIRGFDSRGEV 354 >UniRef50_A6T359 ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T359_JANMA Length = 376 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 106/349 (30%), Positives = 166/349 (47%), Gaps = 21/349 (6%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY---DDACDPKQAV 82 +K+ + ++GP A +G NGAR A+ ++N K + G K + E DDA DPKQ Sbjct: 27 VKIGLAAPLTGPQAFYGKDSQNGARLAVDELNEKKIVVGGKQLRFELLSEDDAADPKQGA 86 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 AVA + + + VIGH S + PA+ IY G+ +SP AT+PELT+ Y R Sbjct: 87 AVAQRFCDLHVNAVIGHTNSGTAIPAARIYHQCGLPNLSPSATSPELTKSAYNTTFRMLA 146 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 DS+ A Y + +K + IA++ D+ YG+GLA + + L+ VV Sbjct: 147 NDSTLAQALAAYTVNVLKLKTIAVVDDRSAYGQGLADAFRTALRNTPVQVVTQQYTNDKA 206 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ-FMGPEGVGNASLSNIAG 261 DFSA++ +K N D V++GG P+ MLRQ +GL Q F+G +G+ + Sbjct: 207 VDFSAILTAIKGRNPDAVFFGGMDPQGSAMLRQMEQLGLTRQKFIGGDGICTQGMEQ--- 263 Query: 262 DAAEGM-----LVTMPKRYDQDPANQGIVDALKADKKDP-----SGPYVWITYAAVQSLA 311 EGM LV D + D+K P GPY +Y AV ++A Sbjct: 264 -RTEGMKIQDNLVCAHSGIALDRTTASRAWKKRYDEKFPGQFQMHGPY---SYDAVLAVA 319 Query: 312 TALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 A++ S EP + + V+ + +D +G++K ++ + Sbjct: 320 KAMQAANSVEPQKYLPAMGKVHFAGVMSNVQFDARGEIKNPTISIYTYQ 368 >UniRef50_Q141F0 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q141F0_BURXL Length = 383 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 106/350 (30%), Positives = 165/350 (47%), Gaps = 8/350 (2%) Query: 8 IIAGMIALAISHTAMADD--IKVAVVGAMSGPIAQWG-DMEFNGARQAIKDINAKGGIKG 64 + G I ADD +K+ ++G A +G D+E NG R AI++ NA+ G Sbjct: 12 LFVGAIFAVAPPATFADDLPVKIGFAAPLTGANAGYGKDLE-NGVRLAIEEANAQKIKIG 70 Query: 65 DKLVG---VEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 DK+ V DD DP+ V A K+V+ G+ V+GH S +T PAS IYE GI +I Sbjct: 71 DKVAQFQIVSEDDQADPRIGVQAAQKLVDSGVSAVVGHFNSGTTIPASQIYEQAGIPVID 130 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 P ATNP +T RG+ + D A Y ++ K +RIAII D+ +G+G A Sbjct: 131 PAATNPVITGRGFANTFMVISTDGQNAGNAGVYAVQVTKAKRIAIIDDRTAFGQGEADEF 190 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + +KA +++ + DFS I +LK N D +++GG + ++ + +G+ Sbjct: 191 EKAVKAHGGSIIAREYTDNKAVDFSTQITKLKSANADLIFFGGLDTQAAGFAKRMKQLGM 250 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKR-YDQDPANQGIVDALKADKKDPSGPYV 300 Q +G GV + +AGD++EG++ R Q P + K Y Sbjct: 251 NAQLVGGGGVMDQDFIKLAGDSSEGVMAWEYGRPLAQLPGGKDFSAKFKKRFGVDILSYA 310 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 Y + A+++ S P LKA + V G +++D G LK Sbjct: 311 PFGYDGAWAAIKAMQQAKSASPNVYRPVLKAIDFDGVTGKISFDSTGALK 360 >UniRef50_A6LX40 Extracellular ligand-binding receptor n=3 Tax=Clostridium RepID=A6LX40_CLOB8 Length = 393 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/309 (30%), Positives = 159/309 (51%), Gaps = 5/309 (1%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A D IK+ V ++G + G NG++ AIK+IN GG+ G KL V DD Sbjct: 41 ASGDTIKIGGVFPLTGDVPALGAAMENGSKLAIKEINDAGGVLGKKLELVSEDDQNQAAT 100 Query: 81 AV-AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A A+ I D + V+G S + P + + +D ++MI+PG+TN ++T G ++ R Sbjct: 101 APNAITKLITQDKVSAVVGTYASKCSIPMAAVAKDSKVVMITPGSTNEKVTTEGGDYVFR 160 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGI 198 +D QG AK+ E +K +++A+++D Y G+++ + +AA V + Sbjct: 161 ACFIDPLQGQVGAKFASENLKAKKVAMLYDIGNDYCVGISKEFKKNFEAAGGTVAYEKTY 220 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 AGE DF A + +K+ N+D +Y Y +G + +QAR +G+K F+G + + L Sbjct: 221 NAGESDFKAFLTEIKELNVDVIYLPDNYSTVGLIAKQAREIGIKAPFLGSDSWSDPGLVK 280 Query: 259 IAGDAAEGMLVT--MPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 + GDA EG T + + D + + + K DPS + ++Y +V LA A+++ Sbjct: 281 VGGDAIEGSYFTDHLSLKSDNASIKKFVENYKKEYNGDPSA-FSVLSYDSVYILAEAIKK 339 Query: 317 TGSDEPLAL 325 GS + A+ Sbjct: 340 AGSTDENAI 348 >UniRef50_Q3JSD7 Outative extracellular ligand binding protein n=35 Tax=pseudomallei group RepID=Q3JSD7_BURP1 Length = 405 Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 11/344 (3%) Query: 12 MIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN-AKGGIKGD--KLV 68 + A+A A + +++ V ++GP+A G NGA+ A+ ++N A I G K V Sbjct: 45 LAAVAFDAHAQSSVVRIGVAMPLTGPVAHLGKDVQNGAQLAVDELNRAPPTIDGKPVKFV 104 Query: 69 GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPE 128 V DD DP+QAV VA ++V+ + V+G L S T A+ +Y GI I+P AT+P Sbjct: 105 LVVEDDQGDPRQAVQVAQRLVDARVAGVVGDLNSGPTIVAAKVYAAAGIAQIAPAATHPA 164 Query: 129 LTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAA 188 TQ GY+ R D+ QG + A + K + IA+I D+ YG+GL + L+A+ Sbjct: 165 YTQLGYKTAFRLMATDNQQGASLAGLAAKLAKGRPIALIDDRGAYGQGLIDQTEKTLRAS 224 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 + D T +F++++ R+K + + YGG + G M+RQ +++G+ F+G Sbjct: 225 GVTRIIRDYTTDTAVNFASILTRVKGAHAAVIVYGGADAQAGPMVRQMKALGIDAAFVGS 284 Query: 249 EGVGNASLSNIAGDAAEGMLVTM---PK-RYDQDPANQGIVDALKADKKDPSGPYVWITY 304 +GV + ++ A EG T P+ R A + +A + K PY Y Sbjct: 285 DGVCTGQWTALSSGANEGQFCTQAGDPRARMAGYAAFERRFEA-RYGKVIVFAPY---GY 340 Query: 305 AAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 AV LA A+ R S EP AL+ L + VIG + + +GD Sbjct: 341 DAVMLLADAMRRANSTEPAALLGALATTRYDGVIGRIRFSPQGD 384 >UniRef50_C0ZKD9 Probable branched-chain amino acid ABC transporter substrate binding protein n=2 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZKD9_BREBN Length = 409 Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 87/246 (35%), Positives = 139/246 (56%), Gaps = 1/246 (0%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+A +SG + GD GA A++ + G L DD DPK V+ A Sbjct: 55 IKIATQSPLSGSNSAIGDAIKTGAGYALEKRKEEFKALGFDLQLFPQDDQGDPKIGVSNA 114 Query: 86 NKIVNDGIKY-VIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 +++D Y V+GH + P+S Y++ ++M+SP T +LT+ G + + R D Sbjct: 115 EMLISDPDVYGVVGHYNTGVAIPSSVKYDEGKLVMVSPANTGVKLTEEGKKTVHRICARD 174 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 +QGP AA Y T+ + IIHDK YG+GL+ V+ + ++ F+GIT GEKD Sbjct: 175 DAQGPKAALYAKTTLGVKTAYIIHDKTAYGQGLSDQVKMQFEKDGVQILGFEGITQGEKD 234 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 +SA++ ++ +N D +++GG YPE G +++QAR G K FMG +G+ ++ + IAG+A Sbjct: 235 YSAVLNQVTVKNPDIIFFGGLYPEGGILIKQAREKGFKGYFMGGDGLDSSDMIKIAGNAV 294 Query: 265 EGMLVT 270 EG++ T Sbjct: 295 EGVVFT 300 >UniRef50_Q3A9Y7 High affinity branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9Y7_CARHZ Length = 394 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 104/337 (30%), Positives = 170/337 (50%), Gaps = 10/337 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ V +SG +A +G NG A+ +INA GGI G KL ++YD+ D +A + Sbjct: 37 DVIKIGVNLELSGNVASFGQSALNGFTLALDEINAAGGINGKKLEIIKYDNKSDNTEAAS 96 Query: 84 VANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ-----RGYQHI 137 VA +++ D + + G + S +T +I E + +++ ATNP++T + +++ Sbjct: 97 VATRLITQDKVPIIFGAVTSGNTMAFINIAEANKVPVLTATATNPDVTVDPKTGKVREYV 156 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFD 196 RT +D QG AK+ E +K +R AI+ D Y GLA+ +G KA VV + Sbjct: 157 FRTCFIDPFQGTAMAKFATEELKVKRAAILKDNTSPYSVGLAKFFTEGFKAGGGEVVADE 216 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 T ++DF +++ ++K N DF+Y YY ++GQ+++QAR +G+ F G +G + L Sbjct: 217 NFTVNDQDFRSVLTKIKSLNPDFIYVPAYYEQVGQIVKQAREMGINVAFGGSDGWDSPKL 276 Query: 257 SNIAG-DAAEGMLVTMPKRYDQ-DPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 IAG DA + +T D+ DP + V K + + Y LA AL Sbjct: 277 IEIAGKDALKNCYITNHYSPDRDDPKVKEFVKKYKEKYGNVPDALAALGYDTGYVLAAAL 336 Query: 315 ERTGSDEPLALVKDLK-ANGANTVIGPLNWDEKGDLK 350 + P A+ LK V G ++ DE+ + K Sbjct: 337 KNAKEITPEAIKDALKNVKDVEGVTGKISIDEQHNAK 373 >UniRef50_D1C9L8 Extracellular ligand-binding receptor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9L8_SPHTD Length = 375 Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 102/349 (29%), Positives = 172/349 (49%), Gaps = 12/349 (3%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A +D+IK+AVVG M+G AQ+G+ GA+ A + INA G+ G ++ V +DD D + Sbjct: 29 ADSDEIKIAVVGPMTGDAAQYGEDFTRGAQLAAEQINAADGVDGKQITIVTFDDRNDTTE 88 Query: 81 AVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A +VA KI D I +GH SS+ A IY+ + ++ A++P +T++G + + R Sbjct: 89 AASVAQKIATDSSIVASMGHFTSSTVYAAMPIYKSNQLPLVVISASDPGITEQGNEWVFR 148 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 + ++ A I+ + ++IAI + +G+ ++A +V + Sbjct: 149 VSPTNNLGAEAMADLIVNELGLKKIAIFYLNTDFGKTEREFFTARVQANGGEIVLDEPYQ 208 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 KDFS+ I +LK D VY YY + ++RQA+ G++ ++ V + + I Sbjct: 209 PDAKDFSSSIIKLKNAGADAVYLSSYYNDAVLLIRQAKDAGVEIRWFTSAAVLSPQFTEI 268 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 G+A EG++ R Q + + +A +A D P+V Y+AVQ++A A G+ Sbjct: 269 GGEAVEGVIT---NRVSQGDSWDAVAEAYRAKYNDDPSPFVIYAYSAVQAVAEAARSEGT 325 Query: 320 DEPLALVKDLKANGANTVIGPLNWDE--KGDLKGFDF-----GVFQ-WH 360 K G T +GPL +DE + + FD+ G FQ W Sbjct: 326 SREAIRDGLAKIQGLETALGPLTFDENRQAVYESFDYLEVRDGQFQLWQ 374 >UniRef50_C7HZL2 Extracellular ligand-binding receptor n=2 Tax=Thiomonas intermedia K12 RepID=C7HZL2_THIIN Length = 382 Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 84/258 (32%), Positives = 138/258 (53%), Gaps = 3/258 (1%) Query: 15 LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDD 74 L +S A + + V +SGP+A G NG + A+ +NA+ G K V D Sbjct: 18 LGLSAQAAEPRVVLGVAVPLSGPLAASGQDAVNGVQMALNQLNAEHARIGGKSVRWAMDA 77 Query: 75 ACD---PKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ 131 D P QA VA K+V++G+ V+GH S T PA+ IY GI I+P +T+P++ + Sbjct: 78 EDDQGLPTQATLVAQKLVDEGVSGVVGHQTSGCTFPAARIYARAGIPQITPSSTSPKIAE 137 Query: 132 RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANAN 191 +GY+ R D++ G A+Y + + QR+A++ D+ YG+GLA K + Sbjct: 138 QGYKTFFRLIANDNALGAGLAEYAHDALHVQRVAVVDDRTAYGQGLADVFSAKAKKLGMD 197 Query: 192 VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV 251 VV + DFSA++ R+K ++ ++YGG Y + G ++RQ R +G+ + MG +G+ Sbjct: 198 VVDREYTDDKATDFSAILTRIKADHPQVIFYGGMYSQAGPLVRQMRQIGITARLMGGDGI 257 Query: 252 GNASLSNIAGDAAEGMLV 269 ++ +AGDA G + Sbjct: 258 CAPIMAKVAGDAVNGTIC 275 >UniRef50_B9Z072 Extracellular ligand-binding receptor n=2 Tax=Chromobacterium group RepID=B9Z072_9NEIS Length = 381 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 104/332 (31%), Positives = 155/332 (46%), Gaps = 11/332 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDKLVG--VEYDDACDPKQAV 82 +K+ +SGP A +G N + AI D+NAK I G K+ V DD DP+ Sbjct: 33 VKIGFSSPLSGPQAHYGKDNENATKMAIDDLNAKPLTIAGQKVTFELVSEDDQADPRVGT 92 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 VA ++V+ G+K VIGH S + PAS IY D GI +S +TNP T GY+ R G Sbjct: 93 QVAQRLVDSGVKAVIGHFNSGVSIPASRIYSDAGIPQLSV-STNPAFTTAGYKTTFRLVG 151 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 DS G +Y + +K QRIA+I D+ YG+G+A ++ V + Sbjct: 152 SDSQVGGALGRYAVAQLKAQRIAVIDDRTAYGQGIADEFIKSIQGLGKQPVKREYTNDKA 211 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DF+A++ LK + D ++YGG + M +Q + +GL + MG + + + +AG Sbjct: 212 SDFTAILTSLKAAHPDVIFYGGADAQAAPMAKQMKRLGLNAKLMGGDMLSTPTFIKLAGA 271 Query: 263 AAEGMLVTMP-KRYDQDPANQGIVDALKADKKDPS---GPYVWITYAAVQSLATALERTG 318 A G +P PA + KA K GP Y V +A A++R Sbjct: 272 DAVGHFSAVPGGELGARPAGKDFEARYKARYKQDVVLLGPQF---YDGVMIVADAMKRAN 328 Query: 319 SDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 S EP + + V ++D G+LK Sbjct: 329 STEPAKFLPLIAKTAYKGVTADFSFDSAGNLK 360 >UniRef50_C5CRE7 Extracellular ligand-binding receptor n=27 Tax=Betaproteobacteria RepID=C5CRE7_VARPS Length = 379 Score = 147 bits (370), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 98/340 (28%), Positives = 167/340 (49%), Gaps = 6/340 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY---DDACDPKQAV 82 +K+ G +SGP A G NG R AI+++NAK G K + E DD CD K V Sbjct: 31 VKIGHSGPLSGPNAFAGKDNENGVRLAIEELNAKKITAGGKTLKFELVSEDDQCDAKSGV 90 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 +VA K+V+DG+KYV+G CS PAS IY EG M+S TNP++TQ GY+++ R Sbjct: 91 SVAQKLVDDGVKYVMGPYCSGVAIPASRIYA-EGGTMVSTVGTNPKVTQGGYKNLFRIIA 149 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D+ G + A Y + +K ++ +I D+ +G+GLA K +V + T Sbjct: 150 SDNQIGSSMAVYAAKVLKVSKVGVIDDRTAFGQGLAEEFSKEAKKQGLTIVGQEFTTDKA 209 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DF+A++ +K + + +++GGY P+ M RQ + + + + +G + V + + + GD Sbjct: 210 VDFTAILTNMKAKAPEAIFFGGYAPQAAPMARQMKQLAVPGKLLGGDTVCSPATGKLGGD 269 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSL--ATALERTGSD 320 A ++ + A G K K+ + + Q + ++++ S Sbjct: 270 AVNDLVFCAQGGSILEKAQSGPAFKAKFKKRFNADADAYAASYYDQLMFIGESMQKANSI 329 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 +P + +L V ++D+KG++K VF + Sbjct: 330 DPDKVGAELYKTTYKGVAATYSYDDKGNMKQAPITVFTFK 369 >UniRef50_C8SVY2 Extracellular ligand-binding receptor n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SVY2_9RHIZ Length = 373 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 105/360 (29%), Positives = 176/360 (48%), Gaps = 11/360 (3%) Query: 1 MKRNAKTIIAG--MIALAISHTAMADDIKVAVVGAMSGPIAQWG-DMEFNGARQAIKDIN 57 KR AK + + LA++ A A DIK+ +V M+G +A G DME N + AI +N Sbjct: 5 FKRLAKRLACATALAGLAMTTMAAAADIKIGIVAPMTGQLASEGQDME-NAVKMAIDAVN 63 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGI 117 A+GG+ GDK++ DDACDP+QAV +K+V++G+ ++G CS + P IY D GI Sbjct: 64 AQGGVNGDKIITTTADDACDPQQAVTAGSKLVSEGVTAIVGGYCSGAVLPTLKIYGDAGI 123 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKP---QRIAIIHDKQQYG 174 + GA + +L + A L +S G A +E K ++IA++ + Y Sbjct: 124 PFVIIGANSTKLVAANQGN----AFLANSTGDMQATTAVELFKKNGYKKIAVVDEGDAYS 179 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 L + + K A + + TAGE+D+SA++ ++K D V++ Y+ + + Sbjct: 180 SDLGKLTAEAFKGAGGEIAAKETTTAGEQDYSAVVTKIKSSGADAVFWTAYHAGGALLTK 239 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKD 294 Q R G + + +G + IAG A EG+ + P D K Sbjct: 240 QLRQAGFQGGIVLGDGNNSPEYLEIAGSAGEGVYLLSPPTVDLLSGAADFKAKYKETYGR 299 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 +G Y ++Y +A A+ R S + A+++ LKA+ + G + + +K L+ +F Sbjct: 300 DAGAYAALSYDVGDLIADAITRAKSADQKAIIEALKASDFKGLAGEIKFTDKNTLQTSNF 359 >UniRef50_A9BM94 Extracellular ligand-binding receptor n=15 Tax=Comamonadaceae RepID=A9BM94_DELAS Length = 422 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 111/347 (31%), Positives = 172/347 (49%), Gaps = 37/347 (10%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDKLV-GVEY-DDACDPKQAV 82 +++A G +SGPIA G E NG R A+ D+NAKG I G KL +E DD DP QAV Sbjct: 73 VRIAHAGPVSGPIASLGKDEENGVRMALDDLNAKGLEIGGRKLRWKLEAGDDGGDPGQAV 132 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 A+A ++ + + V+GHL S +T PA+ IY D GI+M++P A+NP +TQ GY R Sbjct: 133 ALARRLCDKKVAAVVGHLQSGTTLPATSIYHDCGIVMVTPAASNPAITQAGYDTTYRVIA 192 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D + + + + +R AII D+ YG+G+ + +A + D G+ Sbjct: 193 DDRAMVDALVAHAVGKLGVKRAAIIDDRSAYGQGIVALFE--AEAREQGIEIVDKQFTGD 250 Query: 203 K--DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL-KTQFMGPEGVGNASLSNI 259 K DF ++ +K + D +++GG + G MLRQ + + K + +G +G+ L + Sbjct: 251 KATDFVPILTAIKGKKPDAIFFGGLDAQAGPMLRQMAQLAMDKVRLLGGDGLCTLRLPEL 310 Query: 260 AGDAAEGMLVT----------MP------KRYDQDPANQGIVDALKADKKDPSGPYVWIT 303 AG+ + VT MP +RYDQ +Q V + PY Sbjct: 311 AGNTSPLRNVTCAVGGSPLERMPGGAAWKQRYDQRFPDQYQVFS----------PY---A 357 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 Y A LA A+ R S P A + L+ + V P+ + +G+L+ Sbjct: 358 YDATMVLAQAMLRADSIRPDAYIPYLRQTRHDGVTAPIAFTPQGELQ 404 >UniRef50_A6WC82 Extracellular ligand-binding receptor n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WC82_KINRD Length = 391 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 86/236 (36%), Positives = 133/236 (56%), Gaps = 9/236 (3%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 D+ + GA++GP A G E NG + A+ NA+ G ++ YD D QA + Sbjct: 45 DVSIGFFGALTGPNANLGVNEQNGVKLAVDQHNAESGAC--QVTVTPYDSQGDQNQAQGL 102 Query: 85 ANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A ++V D + ++G S ++ A I+++ GI+ ISP ATNP L + G++ R G Sbjct: 103 AQQVVGDENVLGIVGPAFSGESKVADPIFDEAGIVGISPSATNPALAENGWKTFFRVLGN 162 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 D+SQGP AA YI +T+ Q++ +I D +YG+GLA V++ L A V + I G+ Sbjct: 163 DASQGPAAATYISDTLGKQKVYVIDDATEYGKGLADIVRESL---GAKAVKNNTIQTGQT 219 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL---KTQFMGPEGVGNASL 256 DFSA++A ++ D V++GGYYPE G +L+Q R GL K F+ +G + L Sbjct: 220 DFSAVVADVQASGADAVFFGGYYPEGGLLLKQLRESGLSADKLAFITDDGAKDEGL 275 >UniRef50_UPI0001B5404D ABC transporter ligand-binding protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5404D Length = 391 Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 101/325 (31%), Positives = 154/325 (47%), Gaps = 13/325 (4%) Query: 28 VAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANK 87 +A G ++G A G GA+ A+ N G ++ E+D P +A + + Sbjct: 55 IAYAGTINGANAALGQNILKGAKLAVDQHNKAN--PGCQVKLAEFDTEGTPDKAPGIVTQ 112 Query: 88 IVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSS 146 IVN GI VIG S ++ A +I+ G++ ++P ATNP L Q G++ R G D++ Sbjct: 113 IVNTPGIIGVIGLPFSGESKAAGNIFNSAGLVAVTPSATNPSLAQNGWKTFFRALGNDNA 172 Query: 147 QGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFS 206 QGP AAK+I +K ++ +I D +YG GLA S +KA D + + DFS Sbjct: 173 QGPAAAKFITGELKANKVCVIEDDSEYGTGLAAST---IKALGDKASCQDKVKTKQTDFS 229 Query: 207 ALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEG 266 A++ ++K E D ++Y GYY E +Q G+K +F+GP+GV + AGDAA Sbjct: 230 AVVNKIKGEKPDAIFYSGYYQEAAPFAQQLNDAGVKAKFVGPDGVKDDLFVKGAGDAAAN 289 Query: 267 MLVTMPKRYDQDPANQ--GIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLA 324 T P PA+Q DA KA G Y Y L ++ G + Sbjct: 290 AYFTCPCV----PADQFTKFTDAYKAATGVDPGTYSPEAYDVATILLKGID-AGKKDRAG 344 Query: 325 LVKDLKANGANTVIGPLNWDEKGDL 349 L+ +K + WD+ G+L Sbjct: 345 LLDFVKTYDGQGITKHFKWDDHGEL 369 >UniRef50_A5FVF3 Extracellular ligand-binding receptor n=5 Tax=Bacteria RepID=A5FVF3_ACICJ Length = 381 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 107/356 (30%), Positives = 175/356 (49%), Gaps = 14/356 (3%) Query: 17 ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI----NAKGGIKGDKLVGVEY 72 I+H A + IK+ V ++G A G G +A+K + NAKGG+ G K+ Sbjct: 21 IAHAA-SGPIKIGVQAPITGAYADEG----QGIEKAVKLLADQQNAKGGLLGRKIEVKVC 75 Query: 73 DDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR 132 DD QA A ++VNDG+ VIG S + A IY ++ S G +N +L R Sbjct: 76 DDEGKASQAAICARQLVNDGVIAVIGSYTSGAALAAEPIYARSNVIQTSDGTSN-KLLSR 134 Query: 133 GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANV 192 GY+ A +S++ AKY+++ +RIA++ D + GLA +V +KA + V Sbjct: 135 GYKTWFGNAAPNSAEAKFTAKYLIDVRHFKRIAVLTDHSSFATGLADAVIKNIKADHGKV 194 Query: 193 VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVG 252 + ITAG ++F+ ++ +LK D +Y+ GYY + G + Q +G+ F+G + Sbjct: 195 IDKAFITAGSQNFTPVLTKLKALKPDAIYFSGYYSDGGLIKAQMAQLGITATFVGGDANQ 254 Query: 253 NASLSNIAGDAAEGMLVTMPKRYDQ--DPANQGIVDALKAD-KKDPSGPYVWITYAAVQS 309 N + IAG AA+G ++ +Q P + V A KA + P + +++ Sbjct: 255 NVAFGKIAGSAAKGAIIVNVPGPEQLPYPTAKAFVAAYKAKYHQSPPSVFTLTNADGMRA 314 Query: 310 LATALERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGDLKGFDFGVFQWHADGS 364 + A+E+T S +P L L + + G W++KG+ G F F+ ADGS Sbjct: 315 VMQAIEQTKSVKPAKLEHYLHTMKSFDGLTGQFRWNDKGERVGSPFTAFEVQADGS 370 >UniRef50_A4JTH7 Extracellular ligand-binding receptor n=3 Tax=Burkholderia RepID=A4JTH7_BURVG Length = 378 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 103/358 (28%), Positives = 173/358 (48%), Gaps = 13/358 (3%) Query: 12 MIALAISHTAMADDIKVAV--VGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDKLV 68 + LA+ A D+ V + V ++G ++ G + NG R AI+D+N+K I G + Sbjct: 12 FLTLAMQPLAARADLTVKIGQVSPLTGELSHIGKDDENGVRLAIEDLNSKKLRIGGQSVT 71 Query: 69 GV--EYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATN 126 V DDA DP+ AV VA K+V+D + V+GH S ++ PAS IY D GI MI+ ATN Sbjct: 72 FVLDSQDDAADPRTAVTVAQKLVDDHVAGVVGHANSGTSIPASKIYSDAGIPMITESATN 131 Query: 127 PELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLK 186 P LT++G++++ R D QG Y++ +K +++AI+ D+ YG+GLA + +K Sbjct: 132 PLLTEQGFRNVFRMVANDVRQGSVIGTYLVHDLKARKVAIVDDRTAYGQGLADQIDKAVK 191 Query: 187 AANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 246 AA VV + T D+ A++ +K D + + G + ++Q + +GL F+ Sbjct: 192 AAGGTVVAREYGTDKTTDWKAVLTTIKSRQPDAIAFTGGDTQAAAFVQQMQRLGLTATFI 251 Query: 247 GPEGVGNASLSNIAGDAAEGMLVTM-----PKRYDQDPANQGIVDALKADKKDPSGPYVW 301 + ++AG + P Q PA + PY + Sbjct: 252 AGDESCTPQFISLAGSSMNNKTYCTLAGVPPADMPQGPAFFKRFQQRFGAEVQLYAPYAY 311 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 A+ + + + T +P + L+A + V G + +DEKGD++ V Q+ Sbjct: 312 DAVMAMAAAMQSADST---DPKIYLPKLQAVSVDGVTGSIRFDEKGDIRNGAITVRQY 366 >UniRef50_A1TSM1 Extracellular ligand-binding receptor n=2 Tax=Acidovorax RepID=A1TSM1_ACIAC Length = 379 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/340 (30%), Positives = 170/340 (50%), Gaps = 21/340 (6%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYD---DACDPKQ 80 + +++ + ++GP A G +GA AIK++NAKG K V E D D DPKQ Sbjct: 28 ERVRIGFMSPVTGPQAANGGDNRDGALLAIKELNAKGVKVAGKPVVFELDINDDVADPKQ 87 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 V VA + + I++V+G S T PA+ + D IL ++ A+NP++T+ GY + R Sbjct: 88 GVQVAQTLADKKIRFVLGPYNSGVTVPAARVLNDSDILTLTV-ASNPKITELGYGTLFRI 146 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 D+ G A Y + +K + +A+I D+ YG+G+AR + VV + T Sbjct: 147 GASDNQLGTKMATYAAQDLKLKTVAVIDDRTAYGQGVAREFTAQARRLGLQVVATEFTTD 206 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN---ASLS 257 DFSA++ ++ + V+YGGY P+ G +L+Q R++G+ +G +G+ + A+L+ Sbjct: 207 KATDFSAILTNIRGAKAEAVFYGGYSPQGGPLLKQMRALGITGPLLGGDGICSTETANLA 266 Query: 258 NIAGD-----AAEGMLVTMPKRYDQDPANQGIVDALKAD-KKDPSGPYVWITYAAVQSLA 311 + GD G L+ D+ Q + +A+ K+DP Y Y + LA Sbjct: 267 QLTGDLNVYCTQGGSLL------DKSDKGQKFAERYRAEYKRDPL-TYAAAFYDGMYLLA 319 Query: 312 TALERTGSDEPLALVKDLKANGANT-VIGPLNWDEKGDLK 350 A+E T S + ANG V G ++D K DLK Sbjct: 320 NAMESTQSTTDTKKIAQAIANGKYAGVTGEFSYDVKHDLK 359 >UniRef50_Q2T506 Amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=24 Tax=Proteobacteria RepID=Q2T506_BURTA Length = 408 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/337 (28%), Positives = 159/337 (47%), Gaps = 4/337 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVG---VEYDDACDPKQAV 82 + + + ++GP+A+ G NGA+ A+ D N++ G K V V DD DP+ AV Sbjct: 29 VLIGLAAPLTGPLARIGKDLQNGAQLALDDANSRRPTLGGKPVVYRLVAVDDQSDPRAAV 88 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 VA ++V + V+GH + + PAS IY D GI I+P T + T++GY R G Sbjct: 89 TVAQRLVERRVIGVVGHWNTGCSVPASRIYRDAGIAQIAPALTGRQYTRQGYPTAFRIVG 148 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D + G A Y+++T+ +RIA+I D+ +G GLA G+ A +V + Sbjct: 149 HDDASGAHAGAYVVKTLGAKRIAVIDDRTAFGAGLADQFVKGVDANGGAIVDRQYVNDKT 208 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DFSA++ +K + D V++GG + + R+ R + L +G G + ++AG Sbjct: 209 ADFSAVLTAIKAKRADVVFFGGLDAQAAPLARRMRQLTLNATLVGAGGFVTQTFLSLAGP 268 Query: 263 AAEGMLVTMPKR-YDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 +G+ P + P +A + P + Y +L A ER S + Sbjct: 269 GGDGVTALEPGLPLARMPGGAAFDARYRARYRAPIELHAPFAYDEAATLIAAAERADSTD 328 Query: 322 PLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 L L A V G + +D +G+L+ F +++ Sbjct: 329 AARLPAVLHALKRQGVTGAIAFDAEGNLRNPAFTIYR 365 >UniRef50_A0B322 Extracellular ligand-binding receptor n=3 Tax=Burkholderia cenocepacia RepID=A0B322_BURCH Length = 599 Score = 140 bits (353), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 156/333 (46%), Gaps = 5/333 (1%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA-KGGIKGDKLVGV--EYDDACDPK 79 AD + V GA++G A +G+ G R AI +INA + G + DD DPK Sbjct: 245 ADTVVVGFAGALTGAQAHFGEDSARGIRLAIDEINAGHPSVAGHPVTFALDAQDDQADPK 304 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A VA + V+ + VIGH S ++ + +Y I ++P ATNPE T+ GY+ R Sbjct: 305 VATTVAQRFVDTHVSAVIGHQNSGTSIAVARLYATANIAELTPSATNPEFTRLGYRTTFR 364 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 D G A+Y +E + +RI ++ D+ YG+G+A GL A+ A VV + T Sbjct: 365 LLANDDFLGQAVARYAVEQLHARRIGVVDDRTAYGQGIADVFVGGLGASGATVVAREYTT 424 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 DF A + LK + D +++GG + G ML+Q R + + +G +G+ + + Sbjct: 425 DKAFDFGAPLTLLKGKAPDAIFFGGMDTQGGPMLKQMRKLRIAAPLLGGDGLCTHEILKL 484 Query: 260 AGDAAEGMLVTMP--KRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERT 317 AGDA +G LV + + P P Y Y A+ ++ A+ Sbjct: 485 AGDALDGNLVCADGGRSLAKMPGGPAFAARFTQKYGAPVQLYAPYAYDAMMAVYHAVMLA 544 Query: 318 GSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 S +P +V L V G + +D +G+L+ Sbjct: 545 QSTDPAKIVDALHRVDFQGVTGRIAFDARGELR 577 >UniRef50_Q3JQA3 Periplasmic ligand binding lipoprotein n=74 Tax=Burkholderiaceae RepID=Q3JQA3_BURP1 Length = 662 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/329 (29%), Positives = 152/329 (46%), Gaps = 4/329 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY---DDACDPKQAV 82 +++ ++G A +G NG + A+ D A+ K E DD DP+ V Sbjct: 312 VRIGFAAPLTGVNAGYGKDLQNGVQLALDDARAQKITIAGKPARFELVVEDDQADPRIGV 371 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 A +V+ + V+GH S +T PAS +Y+ GI +I P ATNP +T RG ++ Sbjct: 372 QAAQSLVDKKVSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPVITSRGLANVFMVIA 431 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D A +Y ++ K +RIAI+ D+ +G+G A +KAA A +V + + Sbjct: 432 TDGQNAGNAGRYAVDVTKAKRIAIVDDRTAFGQGEADEFDKAVKAAGAAIVAREYTSNQA 491 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DF A I LK +N+D V++GG ++Q + +GL QF+G GV +A IAG Sbjct: 492 VDFRAQITSLKSKNVDLVFFGGLDSLAANFIKQMKQLGLNAQFVGGGGVKDAEFIKIAGP 551 Query: 263 AAEG-MLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 AAEG M + DQ P + K Y Y A + A++ G+ + Sbjct: 552 AAEGAMAWEYGRPLDQLPQGKDFESRFKKRFGVDVLSYAQFGYDATWAAIKAMQAAGTTD 611 Query: 322 PLALVKDLKANGANTVIGPLNWDEKGDLK 350 P LK + G +++ G LK Sbjct: 612 PSGYRPALKKIDFEGITGRISFGGDGSLK 640 >UniRef50_C4XSP4 ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSP4_DESMR Length = 388 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 161/320 (50%), Gaps = 15/320 (4%) Query: 13 IALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY 72 + LA + AD IK+AV ++G A +G+ G +++INA GGI G KL V + Sbjct: 19 LGLAAAPAHAADTIKIAVPTPLTGSAAGYGENVKAGVDLKLEEINAAGGINGKKLEAVYF 78 Query: 73 DDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT- 130 D+ C+P++A V++ IVND I ++GHLCSS+ Y EGI I+P ATN ++ Sbjct: 79 DEQCEPREAATVSSSIVNDEAIVAIVGHLCSSAHLAGLPAYVREGIAAITPTATNTTIST 138 Query: 131 ----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLK 186 ++G R D QG A Y + + +++A+ ++ YG GL + K Sbjct: 139 KSKDEKGKAWSFRNVYRDDFQGKFLADYSAKVLGLKKVAVFYENNDYGIGLKDAFIKEAK 198 Query: 187 AANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 246 A VV + G++D++ + +LK + ++ GYYPE + QA+ +GL M Sbjct: 199 ALGLTVVGEEAYKKGDQDYTPQLTKLKGAAPEAMFIAGYYPEGALIADQAKKIGLNVAKM 258 Query: 247 GPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN-QGIVDALKAD-KKDPSGPYVWIT- 303 G +G N + G +A+ +T P + A+ + +DA KA K+D W++ Sbjct: 259 GADGFDNLDYVKLGGASADNTYLTAPFLVETAGADAKKFIDAFKAKYKRDVD----WMSA 314 Query: 304 --YAAVQSLATALERTGSDE 321 Y A +A A+ + G+D Sbjct: 315 NAYDAAGIMAEAIAKVGADR 334 >UniRef50_D1ALD8 Extracellular ligand-binding receptor n=6 Tax=Fusobacteriaceae RepID=D1ALD8_SEBTE Length = 381 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 106/354 (29%), Positives = 178/354 (50%), Gaps = 18/354 (5%) Query: 3 RNAKTIIAGMIALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 +NA T AG + T D +K+ +G ++G +AQ+G G I++INA+G Sbjct: 20 KNADTAAAG------TETKTEDKTVVKIGFIGPLTGGVAQYGIATKEGVELKIEEINAQG 73 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GI G KL + DD D K+AV K+V ND + +IG + S + +++ E + + M Sbjct: 74 GINGKKLELITVDDKGDAKEAVNAYKKLVSNDKVDMIIGAVTSVPSNAIAELAEKDKMPM 133 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKP-QRIAIIHDKQ-QYGEGL 177 I+P TN ++T G +++ RT D QG +Y T K ++IA++ +K Y GL Sbjct: 134 ITPTGTNIDITG-GKKYVYRTTFTDPFQGAVMGRY--ATAKGFKKIAVLTNKSDDYSTGL 190 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 ++S + K A ++ + T +KDF +++ +K N+D +Y YY +G + QA+ Sbjct: 191 SQSFIEEAKKGGAEII-ENSYTKEDKDFKSILTNIKNANVDAIYIPDYYETIGLIATQAK 249 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKAD-KKDPS 296 +G+ QF+G +G + +N A + V+ D+ P Q + A KKDP Sbjct: 250 ELGINAQFLGGDG-WDGVQTNFAAVTDGALFVSQYAANDESPLVQNFIKAYNEKYKKDPI 308 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 + + Y V+ +A AL+ +L++ KA + V G L +DE D K Sbjct: 309 -LFAALGYDTVEIIANALKTAKDSSADSLIEAFKATDLDLVTGKLVFDENNDPK 361 >UniRef50_C9KMT7 Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMT7_9FIRM Length = 391 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 169/335 (50%), Gaps = 11/335 (3%) Query: 7 TIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 T++ G + A +++IKV M+G +A +G +G + AI +IN GG+ G K Sbjct: 17 TMLMGGVLAGCGSQADSNEIKVGANFEMTGNVANYGAATLDGLKLAIDEINDAGGVDGKK 76 Query: 67 LVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT 125 + V D+ + +AV A K++ +D + ++G +++ S + D + +I+P AT Sbjct: 77 ITLVTADNKSEASEAVNAATKLISDDKVSVLVGPAVTANVIAESQVATDNKVPIIAPDAT 136 Query: 126 NPELTQRGYQ---HIMRTAGLDSSQGPTAAKYILETVKPQRIAI-IHDKQQYGEGLARSV 181 +P++T + + R+ +D QG AK+ E +K + I + + Y + L + Sbjct: 137 SPDVTVENGKVKPFVFRSCFIDPQQGTVMAKFASENLKAKTAVIYVDNSTDYSKSLGKVF 196 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 ++ +AA V+ + A ++DF A + +LK N D ++ YY E+G++++QAR +G+ Sbjct: 197 KEKFEAAGGKVLMEEAFLAKDQDFKATLTKLKTANADVIFVPAYYEEVGKIVKQARELGI 256 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVW 301 +G +G ++ +++IAG A D+D + + V+A K + Sbjct: 257 TCPILGTDGWDDSKVTDIAGADALNNTYFSTHYSDKDESVKPFVEAFKNKYGHMPNVFAA 316 Query: 302 ITYAAVQSLATALERTGSDEP------LALVKDLK 330 + Y A + LA A++R GS +P L KDLK Sbjct: 317 LGYDAGKMLADAIKRAGSGDPEKIQKALEETKDLK 351 >UniRef50_Q1IZ32 ABC-type branched-chain amino acid transport system, periplasmic component n=6 Tax=Deinococcus RepID=Q1IZ32_DEIGD Length = 384 Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 89/271 (32%), Positives = 143/271 (52%), Gaps = 3/271 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ A ++ + + ALA+ +K+A + +SG + G NGA+ A+ + + Sbjct: 1 MKKTALSL-SVLTALALGSAHAQTVVKLATLTPLSGGQSDLGTQIRNGAQLAVNEYKPQF 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILM 119 G L + +DD DP A A KI D I V+G L S PAS + M Sbjct: 60 KKLGMDLQLIAFDDQADPATGTAQARKIAADRQILAVVGTLNSGVAIPASAALAPSHVAM 119 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 ISP T ++T RG ++ R D +QGP A +I +K +++ I++DK YGEGLA+ Sbjct: 120 ISPANTANQVTDRGLSNMNRIVARDDAQGPAGANFIANNLKAKKVYILNDKTAYGEGLAQ 179 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 V+ LKA V+ +G T + DFS++IA++K D +Y+GG Y ++G ++Q R Sbjct: 180 EVEKALKAKGVQVIANEG-TEEKSDFSSIIAKIKLNRPDAIYFGGIYNQVGVFIKQLRDA 238 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVT 270 G+ +G +G+ ++ L+ IAG A + T Sbjct: 239 GIDAPVVGGDGLDSSQLAVIAGAGANNIYFT 269 >UniRef50_A6M3G8 Extracellular ligand-binding receptor n=3 Tax=Clostridium RepID=A6M3G8_CLOB8 Length = 384 Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 97/354 (27%), Positives = 176/354 (49%), Gaps = 16/354 (4%) Query: 6 KTIIAGMIALAISHTAMA-------------DDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 K++++G++A A++ T +A D IK+ +G +SG + +G GA+ Sbjct: 3 KSLLSGILASAMAITLLAGCSGNSAGDGNNGDTIKIGAIGPLSGAASTYGVSVKEGAQLL 62 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDI 111 K++N GGI G K+ V DD DP ++ NK+V+D + ++G + S +T + Sbjct: 63 EKEVNDAGGINGKKIKFVFEDDQADPNSSMQAFNKLVDDEKVSAILGPVTSGATLAVAPN 122 Query: 112 YEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK- 170 + I MI+P AT P +T+ G ++ R +DS QG AKY E + + A++++ Sbjct: 123 ATSKQIPMITPTATEPTITKVGGDYMFRGCFVDSFQGEVLAKYASEKLGKKTAAVLYNSG 182 Query: 171 QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 Y +G+A S + ++A V F + DF A + ++K N D + YY +G Sbjct: 183 SDYSKGIADSFKSKFESAGGQVGEFLTYNDKDTDFKAQLTKIKSLNPDIIVLPDYYNVVG 242 Query: 231 QMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGML-VTMPKRYDQDPANQGIVDALK 289 + +QAR +G+ +QF+G +G + L+ I G A +G L + D D + V++ K Sbjct: 243 LIAKQARDMGITSQFLGGDGWESEELAKIGGKAVDGALYINHYYSGDSDENVKKFVESYK 302 Query: 290 ADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 + + ++Y + L A+E+ G + A+ L + N+V G + + Sbjct: 303 KEYNKEPDSFAALSYDTSKILVKAIEKAGKTDGAAIKDALASMEMNSVTGNIKF 356 >UniRef50_C6J478 Extracellular ligand-binding receptor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J478_9BACL Length = 385 Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 83/238 (34%), Positives = 132/238 (55%), Gaps = 1/238 (0%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+A +SG A G+ G + A+++ A+ G L V YDD D K+ VA A Sbjct: 38 IKIASQSPLSGGSAIQGESIKLGGQMALEERQAEFKDLGFDLQFVPYDDQGDSKKGVANA 97 Query: 86 NKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 I D + V+GHL S + P+S +YE I M+SP +T + T R + R D Sbjct: 98 ELIGADQAVLAVLGHLNSGVSIPSSVVYEKYSIPMVSPASTATDFTDRKLKIANRIVARD 157 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QGP A+Y ++TV + I +I DK YG+GLA + + + A + ++GIT GEKD Sbjct: 158 DFQGPAGAEYAVKTVGAKNIFVIQDKTAYGQGLADAFRSSAEELGATIAGYEGITVGEKD 217 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 F+ ++ ++ + DF+++GG Y E G +++QAR G+ MG + + ++ + +IAGD Sbjct: 218 FNGVLNQVLSKKPDFIFFGGMYAEAGLIVKQAREKGITVPIMGGDALDSSGMVDIAGD 275 >UniRef50_B9Z602 Extracellular ligand-binding receptor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z602_9NEIS Length = 372 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 96/357 (26%), Positives = 168/357 (47%), Gaps = 6/357 (1%) Query: 7 TIIAGMIALA-ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKG 64 T++ ++AL IS + A+ +K+ +G ++GP A WG N A+ A+ +N I G Sbjct: 4 TLLVTLLALGGISAASAAEVVKIGFIGPLTGPDAHWGKDNQNCAQLAVDTLNRSALRING 63 Query: 65 D--KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 + V DD DPKQ+ A K++++ +K V+G S +T PA+ I G+ S Sbjct: 64 QPVQFELVSQDDQEDPKQSTLAAQKLLDEEVKAVVGPFTSGTTIPAARIINQAGLPQFSV 123 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 A N T +GY + R + +D+ GP A+Y L +K +RIA+I D+ Y +GLA + Sbjct: 124 -AVNATYTNQGYGNAFRLSAVDTRMGPAIAQYALSELKAKRIAMIDDRTAYSQGLADKFE 182 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 K A V+ + T G+ +FS ++ ++ D ++ + + Q + +GL Sbjct: 183 AEAKRLGAQVIRREYTTPGQNNFSPILTTIRAAKPDLLFVAMSDSQAAPLALQMKQLGLS 242 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDALKADKKDPSGPYVW 301 T+ + + + + ++G +EG + + ++ Q + A P Y Sbjct: 243 TKVLSGDMIQTDNFIKLSGSNSEGFMAAVAGNVLEKRSQGQDFIKRYHAKYGKPPLSYGP 302 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 Y AV +A A+++ S EP + LK V +D +GDL V+Q Sbjct: 303 QHYDAVMLVAKAMQQANSTEPGKVTAALKKISYEGVNASYRFDSRGDLIQAPITVYQ 359 >UniRef50_C4DI28 Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI28_9ACTO Length = 323 Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 109/179 (60%), Gaps = 7/179 (3%) Query: 96 VIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYI 155 V+G S + A+ I+E+ G+ +IS AT PEL ++G++ RT G D+ QGP A YI Sbjct: 51 VVGPGFSGESTAANPIFEEAGMPIISGSATAPELAEKGWKVFHRTIGNDAVQGPAVASYI 110 Query: 156 LETVKPQRIAIIHDKQQYGEGLARSVQDGL--KAANANVVFFDGITAGEKDFSALIARLK 213 + +K +++ +I D+ YGEGLA++++D L K A V D +K+F+ +I +LK Sbjct: 111 NDVLKAKKVFVIDDQTAYGEGLAKTLKDALGDKLAGEEQVKTD-----QKEFAPVINKLK 165 Query: 214 KENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP 272 D V+Y GYYPE G L Q + G++ QF+GP+GV + + A DA+EG ++T P Sbjct: 166 DSKADAVFYSGYYPEGGPFLNQMKKAGVEAQFIGPDGVKDENFIEAAKDASEGAIITCP 224 >UniRef50_A5TY68 Branched chain amino acid ABC superfamily ATP binding cassette transporter binding protein n=15 Tax=Bacteria RepID=A5TY68_FUSNP Length = 384 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 166/333 (49%), Gaps = 5/333 (1%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 T A+ IK+ +G ++GP+A +G NG + AI +INA GGI G ++ D+ D Sbjct: 30 TTKAETIKIGAIGPLTGPVAIYGISATNGLKLAIDEINANGGILGKQVELNLLDEKGDST 89 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 +AV NK+V+ G+ ++G + S T +++ +GI MI+P T +T+ G ++ R Sbjct: 90 EAVNAYNKLVDWGMVALVGDITSKPTVAVAEVAAQDGIPMITPTGTQLNITEAG-SNVFR 148 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAII-HDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 D QG AK+ E + + +AI+ ++ Y +G+A + + VV +G Sbjct: 149 VCFTDPYQGEVLAKFAKEKLGAKTVAIMSNNSSDYSDGVANAFVAEAEKQGVQVVAREGY 208 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 + G+KDF A + ++ ++N D ++ YY + G + QAR VGLK+ +G +G + Sbjct: 209 SDGDKDFRAQLTKIAQQNPDVLFIPDYYEQDGLIAIQAREVGLKSVIVGSDGWDGVVKTV 268 Query: 259 IAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKK---DPSGPYVWITYAAVQSLATALE 315 A V Y +N+ I + +K K+ D + ++Y L A+E Sbjct: 269 DPSSYAAIEDVYFANHYSTKDSNEKIQNFIKNYKEKYNDEPSAFSALSYDTAYLLKAAIE 328 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 + G+ + A+ K +K + G L +DEK + Sbjct: 329 KAGTTDKEAVTKAIKEIQFEGITGQLTFDEKNN 361 >UniRef50_C0QMD9 ABC-typ branched-chain amino acid transport system, periplasmic substrate binding component n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QMD9_DESAH Length = 385 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 106/366 (28%), Positives = 177/366 (48%), Gaps = 18/366 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMA----DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M + ++ ++ L++ T +A + I V G+ +G A +N ++ A+ + Sbjct: 1 MMKKCIVLLFTVLFLSMGQTCLANGVAEGIHVGNAGSFTGDAAAPCMEIYNSSQLAVDEW 60 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKY-VIGHLCSSSTQPASDIYEDE 115 NA+GGI+G ++ + DDA DP Q + VA K +D + Y V+G S Q + IY Sbjct: 61 NARGGIQGVQIEHIMGDDALDPAQGIHVARKFTSDPLMYGVVGPPVSHIAQASLKIYGQN 120 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 + I+ A+ PELT+ GY+H R + + G A +I +K ++IAI+++K Y E Sbjct: 121 DLACITTAASKPELTESGYKHFFRVNARNDAHGLNCALFIKRNLKARKIAILNEKVAYCE 180 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYY-GGYYPEMGQMLR 234 LA+ L + D I AG KD+SA++ ++K D +++ P+ +R Sbjct: 181 NLAKQTIKSLNGLGITEIMNDTIVAGAKDYSAVLTKVKAYKPDVLFFIATAAPDQAIGVR 240 Query: 235 QARSVGLKTQFMGPEGVGNAS-LSNIAGDAAEGMLVTM--PKRYDQDPANQGIVD-ALKA 290 QA+ +G+ F G EG + + AA+G V P Y D A + + K Sbjct: 241 QAKELGIDAIFFGTEGARDKKDFIEASEGAAQGAYVYHFSPDIYSIDEAGEYVKKYEAKY 300 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPL---ALVKDLKANGA-NTVIG-PLNWDE 345 K GP Y A+ L TA++ D + ++ L A A ++G P+++DE Sbjct: 301 GKLSGFGP---PAYEAMNILLTAIDLAAKDGKIDREEVIFQLAAIKAYKGILGFPISFDE 357 Query: 346 KGDLKG 351 KGDL G Sbjct: 358 KGDLLG 363 >UniRef50_D2RMU5 Extracellular ligand-binding receptor n=5 Tax=Veillonellaceae RepID=D2RMU5_ACIFE Length = 392 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 166/329 (50%), Gaps = 15/329 (4%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 ++I+V + ++G +A +G + G + A+ INAKGGI G K+ VE D+ +P ++ Sbjct: 36 NEIRVGALFELTGNVANYGKSTYKGVQLAVDQINAKGGINGKKIKLVEADNKSEPSESGN 95 Query: 84 VANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT--QRG--YQHIM 138 A K++ D + +IG S A+ + + + +++P AT P +T ++G I Sbjct: 96 AATKLITKDKVSVIIGPATSGCVSAATPVVTNSKVPLMAPVATAPGITVDEKGKVRPFIF 155 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDG 197 R D QG AK+ ++T+K + IAI +D Y +GL L+ VV + Sbjct: 156 RACFTDPFQGKLMAKFAVDTLKLKNIAIFYDSSSDYSKGLMDVFGKTLEEKGGKVVGKEA 215 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 A ++DF + + +LK N + +Y GYY E+ ++++QAR VGL +G +G + L+ Sbjct: 216 FLAKDQDFKSALTKLKATNPEALYVPGYYEEVSKIIKQAREVGLTCPILGSDGWDSPKLA 275 Query: 258 NIA-GDAAEGMLVTMP-KRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 IA G+A G T D+DP Q + KA + + Y ++A A++ Sbjct: 276 QIAGGEALNGTYFTSAYSAQDKDPHVQQFIKDYKAKFNEEPDTFAIHAYDGTLAVAEAIK 335 Query: 316 RTGSD------EPLALVKDLK-ANGANTV 337 + G+ + L+ +KDL+ A G T+ Sbjct: 336 QAGTTDGTKIADALSKIKDLQVATGKYTL 364 >UniRef50_A5CZK0 ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CZK0_PELTS Length = 379 Score = 130 bits (327), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 97/314 (30%), Positives = 148/314 (47%), Gaps = 7/314 (2%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 H + +DI V+G ++ P A M G A+ +IN +GGIKG K+ VE DD Sbjct: 32 HRSGREDI---VIG-LAWPFATKNSMLKEGVELAVDEINGRGGIKGKKIRLVEKDDEGTV 87 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 V A +V + VIGH S + AS IYE+ G+LM+SP +T P LTQRGY+ I Sbjct: 88 TGGVNAAQSLVKIPNLVAVIGHRASFVSIAASAIYEEAGVLMLSPASTAPNLTQRGYKLI 147 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 R D A + +R+A+ + + YG GLA S +D K A ++ Sbjct: 148 FRNIPGDDEIARQLALFAAGR-GHRRMAVYYSEDSYGLGLANSFEDHAKKAGIKIIDRIS 206 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 A + D + L + + + D ++ Y P+ + + A G+ F+ + + L Sbjct: 207 YYADQDDLARLAKKWQALDYDGIFVAHYMPDGAEFIADAAKAGITAPFLAGDAMDTPELY 266 Query: 258 NIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 IAG AAEG +V ++ D P + ++ PY Y AV LA A+E Sbjct: 267 KIAGKAAEGTVVGSIFNPGDPRPETRQFIENFSKKYNTAPTPYAAQGYDAVHLLAAAVEE 326 Query: 317 TGSDEPLALVKDLK 330 +GS +P A+ L+ Sbjct: 327 SGSTDPRAVAGKLR 340 >UniRef50_B0RKF6 Periplasmic component protein n=1 Tax=Herbaspirillum seropedicae RepID=B0RKF6_HERSE Length = 310 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/238 (34%), Positives = 123/238 (51%), Gaps = 4/238 (1%) Query: 96 VIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYI 155 +IGHL S +T PAS IY D GI +SP ATNP+ TQ+G++ R D+ G KY Sbjct: 1 MIGHLNSGTTIPASKIYSDAGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYA 60 Query: 156 LETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKE 215 ++ + ++IA+I D+ YG+G+A G KAA +V DF+A++ LK + Sbjct: 61 VQKLGTKQIAVIDDRTAYGQGVADEFAKGAKAAGGTIVGTQYTNDKATDFNAILTSLKGK 120 Query: 216 NIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY 275 D V++GG G MLRQ + +G+ +FMG +G+ SL +AGD V + Sbjct: 121 KPDVVFFGGMDAVGGPMLRQMKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAG 180 Query: 276 DQDPANQGIVDALKADKKDPSGPYVWIT----YAAVQSLATALERTGSDEPLALVKDL 329 D A + +D +A K G V Y A ++A A+ + GS +P + +L Sbjct: 181 GVDEAGKKGMDDFRAAYKKKFGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPEL 238 >UniRef50_A5HYZ7 Branched-chain amino acid transport system,substrate-binding protein n=10 Tax=Clostridium RepID=A5HYZ7_CLOBH Length = 380 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/331 (29%), Positives = 168/331 (50%), Gaps = 11/331 (3%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + IKV +V +SG +AQ G N A+ A+ ++N +GGI K+ V DD +PK+A + Sbjct: 35 ETIKVGLVAPLSGAMAQDGKSILNAAQLAVDEVNKEGGINKKKIELVYEDDKGEPKEAAS 94 Query: 84 VANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 +ANK +D I V+G + T IY I M+ P + P L+ ++ + Sbjct: 95 IANKYSSDKDIMAVMGSFSAPCTLAGIPIYNKAKIPMMGPCGSAPALSGSS-EYYRKVTP 153 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D + G +K++L+ + +++AII+ YG+G+A SV + K VV + Sbjct: 154 SDLTTGKELSKWMLKDMNYKKVAIIYVNNDYGKGVAESVDNFYKENGGQVVAKESYMPKT 213 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 +DF ++I ++K +N D + G +Y + G L+QA +VG + GP + + SL ++AG Sbjct: 214 QDFGSIITKVKSKNPDIIIMGSFYGDAGAFLKQAHNVGYNPKVAGPTPLLSKSLVDLAGK 273 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKK----DPSGPYVWITYAAVQSLATALERTG 318 AEG+ + + N+ + + + KK DPS + +Y A + L +++ G Sbjct: 274 DAEGIFTI--GSFSTNLENEKVKEFAEKYKKKYNQDPSS-FAAYSYDATKILIEGIKKGG 330 Query: 319 SDEPLALVKDLKANGANT-VIGPLNWDEKGD 348 +D + + LK G T V G +++ GD Sbjct: 331 NDRE-KINEALKNMGTYTGVTGNTKFEKSGD 360 >UniRef50_A8KXL9 Extracellular ligand-binding receptor n=8 Tax=Frankia RepID=A8KXL9_FRASN Length = 403 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S+ A + + G +SG Q G +NG A+ N GG+ + V DD Sbjct: 43 SNEAGTKEFLIGFQGPLSGENQQLGINAYNGVLTAVDLANRTGGLPFTLRI-VASDDQGV 101 Query: 78 PKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 P+Q A K++ N + V+G + S+ T+ + +Y G+L +SP AT P LT G+ Sbjct: 102 PEQGPTAAQKLIDNPDVVAVVGPVFSAPTKASEPLYSQTGLLSVSPSATAPALTDLGFTS 161 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 R D+ QG AA+Y+ + VK +R+ + D+ +YG GL+ +V+ GLK A D Sbjct: 162 FYRVIAPDTVQGAGAAEYLAKVVKAKRVYSLDDRSEYGTGLSGAVERGLKQAGVAYT-HD 220 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 GI KD+++ ++ + D VYY GYY + + + RS G + +G + Sbjct: 221 GINP-TKDYTSQATKIMADGADAVYYSGYYSDFALLTKALRSKGYDGAILSGDGSNDDQY 279 Query: 257 SNIAGDA-AEGMLVTMP-KRYDQDPANQGIVDAL-KADKKDPSGPYVWITYAAVQSLATA 313 AG A AEG L+T P + DPA G V K + G Y Y A ++ + Sbjct: 280 IRQAGAANAEGTLITCPCSDANTDPAATGFVSEYKKVNSGLKPGTYSGEAYDATNAIISV 339 Query: 314 LERTGSDEPL-ALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 L + G+ +++ D + V + ++ GD++G V+Q Sbjct: 340 LRKLGTGASRESVLADFGSVDFPGVTKRIRFERNGDVQGSTVYVYQ 385 >UniRef50_C6JQZ8 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=2 Tax=Fusobacterium RepID=C6JQZ8_FUSVA Length = 386 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 86/327 (26%), Positives = 158/327 (48%), Gaps = 5/327 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+ + ++G +A +G N ++ A ++INA GGI G K+ + YD+ D +AV Sbjct: 37 IKIGGLAPLTGGLAIYGTTASNASKLAFEEINANGGILGKKVEFIVYDEKGDSTEAVTAY 96 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 N++V+DG+ +IG + S T ++I + + MI+P T +T+ G ++ R D Sbjct: 97 NRLVDDGVVALIGDITSKPTLAVAEIAAQDNMPMITPTGTQYNITEAG-PNVFRVCFTDP 155 Query: 146 SQGPTAAKYILETVKPQRIAI-IHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QG A + + + + AI +++ Y +G+A+S + + +V +G G+KD Sbjct: 156 YQGVVLANFAQQKLNAKTAAILVNNSSDYSDGIAKSFTEEAEKLGITIVGKEGYADGDKD 215 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP---EGVGNASLSNIAG 261 F A + ++ N D + YY + + QAR VG+K+ F+GP +G+ A + G Sbjct: 216 FKAQLTKIAPTNPDVLVIPEYYEQAALIATQAREVGIKSTFIGPDGWDGIAKALDKSAYG 275 Query: 262 DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 D Q + + KA + + + Y A + ++E+ GS + Sbjct: 276 AIENSYFTNHYSTQDTSEKVQNFIKSYKAKYNEDPSAFSALGYDAAYIVKASIEKAGSTD 335 Query: 322 PLALVKDLKANGANTVIGPLNWDEKGD 348 A+V+ +K + V G L +D K + Sbjct: 336 KKAVVEAMKNINYDGVTGQLTFDAKNN 362 >UniRef50_A8U523 Putative ABC transporter, branched chain amino acid-binding protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U523_9LACT Length = 381 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 96/356 (26%), Positives = 177/356 (49%), Gaps = 19/356 (5%) Query: 6 KTIIAGMIALAISHTAM-------ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 K ++ G+ AL++ TA AD+IK+ + +G ++ +G E N + A+K+IN Sbjct: 3 KRLVMGVAALSLLATACGAGSGSNADEIKIGSMFEKTGEVSAYGTAEANAVKLAVKEIND 62 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKI-VNDGIKYVIGHLCSSSTQPASDIYEDEGI 117 GGI K+ VEYD D +A ++A K+ D + ++G + + + ++ G+ Sbjct: 63 NGGILDKKIDLVEYDTKSDNTEAASIATKLATQDEVSIIVGPATTGAVKASTPAVTRAGV 122 Query: 118 LMISPGATNPELT--QRG--YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ- 172 +++P T+ LT + G +I RT+ DS QG A++ + ++ +I D Sbjct: 123 SLVTPSGTDDSLTIDENGKVQPNIFRTSFQDSFQGIALAEFATNELGAKKALVIGDSSSD 182 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 Y GL ++ + + +V + TA + DFSA++ R+K + DF++ GYY + G + Sbjct: 183 YALGLTKAFEGKF---DGEIVAEENFTADDTDFSAILTRIKDLDFDFIFLPGYYNQAGLI 239 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKRYDQDPAN-QGIVDALKA 290 ++QAR +G+ +G +G GN +L +AG D + + + + + A + + A KA Sbjct: 240 IKQAREMGITQPILGADGFGNEALLELAGVDNVDDVYYSAHYSPNSEDAQVKEFIAAYKA 299 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIGPLNWDE 345 + + + Y V +A A+E P AL K L+ + V G ++DE Sbjct: 300 EYDVDPDMFAALAYDTVYLVAQAIEAADDTTPKALTKALEDITEFDGVTGTFSFDE 355 >UniRef50_D2Q320 Extracellular ligand-binding receptor n=19 Tax=Actinomycetales RepID=D2Q320_9ACTO Length = 409 Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 101/353 (28%), Positives = 161/353 (45%), Gaps = 18/353 (5%) Query: 27 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVAN 86 K+ V+ +SG ++ G + A+K N I G KL DD P A Sbjct: 43 KIGVIAPLSGDLSALGLGIQHSVELAVKQANDSNAIPGWKLEVAAKDDEAKPDVGKNAAT 102 Query: 87 KIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ---------RGYQH 136 + +D + V+G L +S +Q + + I+ +SP T P LTQ R Y Sbjct: 103 ALSSDKDVIGVVGTLNTSVSQQVQPVLAPKNIVQVSPANTGPGLTQGANWQKDPKRPYPT 162 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 RT D+ QGP AA+Y+ ET K ++A IHDK+ YG+GL + + K VV + Sbjct: 163 YFRTCTTDAVQGPFAARYLYETAKITKVATIHDKKAYGQGLVGTFTEEFKKLGGQVVAAE 222 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 I + +F A+++ +K VYYGG YP+ G + +Q ++ GL MG +G+ + Sbjct: 223 TINPDDANFQAVVSAVKPSAPQAVYYGGEYPQAGPLSQQMKAAGLNVPLMGGDGIFDPKY 282 Query: 257 SNIAGDAAEGMLVT-MPKRYDQDPANQGIVDALKADK-KDPSGPYVWITYAAVQSLATAL 314 +AG A G L T + D + + V+ A+K +P Y +Y A ++ AL Sbjct: 283 VQLAGKTAPGDLATSVGAPVDSLASAKKFVEDYNAEKFAEPYAAYGGYSYDAANAIINAL 342 Query: 315 ERTGSD------EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 + + D A V+ L + V G + +D+ GD V++ A Sbjct: 343 KTSLKDANDVESARAATVEALGKVSFDGVTGKVAFDQYGDTTSKVLTVYKVDA 395 >UniRef50_A9IHL6 Putative binding-protein-dependent transport protein n=4 Tax=Bordetella RepID=A9IHL6_BORPD Length = 382 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 159/326 (48%), Gaps = 7/326 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +++ ++ +++G A +GD G R AI +IN GG+ G + DD DP + A Sbjct: 38 LRLGIIESITGAAASYGDAHNKGTRLAIDEINKAGGVNGLPIEVHAEDDKSDPATGINAA 97 Query: 86 NKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 K++ + ++G S T S E + +++ A +P +T++G+++ R D Sbjct: 98 KKLITQRKVDAIVGSDASLVTIAFSKENEKYKVPLVNGMAGSPTITEQGFKYTWRIKITD 157 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 + A +Y ++ K +IA + + YG+ ++ D + A VV ++ GE D Sbjct: 158 NQLDTKAIEYYIQDKKAHKIAFLAENSDYGKPPTKAAADRARELGAEVVAYEEYNRGETD 217 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 F A + ++ + D ++ GYY E + RQ R +G+KTQ + EG G A +AGDAA Sbjct: 218 FKAQLTNIRDQAPDVLFVHGYYTEGSIIARQIRELGIKTQLIVNEGQGVAKFQELAGDAA 277 Query: 265 EGMLVT---MPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 EG + +P D+ ++ A +A G + +Y AV ++ A + G Sbjct: 278 EGAVFPTTWLPGLSDER--SKQFETAYRARYNTEPGAFAAGSYEAVYTVVEAARKGGGTS 335 Query: 322 PLALVKDL-KANGANTVIGPLNWDEK 346 + L + G +T++GP+++D+K Sbjct: 336 AEQIQAGLAQLQGFDTLLGPVHFDQK 361 >UniRef50_B1ZYR7 Extracellular ligand-binding receptor n=3 Tax=Verrucomicrobia RepID=B1ZYR7_OPITP Length = 384 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 95/335 (28%), Positives = 162/335 (48%), Gaps = 13/335 (3%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA- 81 A+ IK+ +++G A G G A++ INA GG+ G L + D ++ Sbjct: 26 AEPIKIGEYASLTGKEASLGQSSHQGTVLAVETINAAGGVLGRPLQLITEDTQSKAGESG 85 Query: 82 VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 AV I D + ++G + SS + + I + + M++P +TNP++T+ G +I R Sbjct: 86 TAVRKLISRDKVVAILGEVASSRSLEGAPICQRLKVPMVTPASTNPKVTETG-DYIFRVC 144 Query: 142 GLDSSQGPTAAKYILETVKPQRIAI-IHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 +D QGP AK+ LET+K +R+ + + Y GLA+ ++ + A +V Sbjct: 145 FIDPFQGPVMAKFALETLKAKRLGLMVSASSAYSVGLAKYFKEAIVAGGGTIVAEQRYQE 204 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G+KDF A + ++ +D ++ GYY E M++QAR +G+ G + +L + Sbjct: 205 GDKDFKAQLTAIRAAGVDAIFNPGYYNEGALMVKQARDLGITVPMFGADSWEAEALIELG 264 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPY-----VWITYAAVQSLATALE 315 G A EG+ + DPA + + D ++A ++ Y + Y +V LA A+ Sbjct: 265 GKAVEGVFLCS-HYTPTDPAPR-VQDFVRAYRQRWGAGYAPDSNASLGYDSVLVLADAIR 322 Query: 316 RTGSDEPLALVKDLKANGAN--TVIGPLNWDEKGD 348 R GS EP A ++D A N V G + D+ D Sbjct: 323 RAGSAEPKA-IRDALAQTRNFEAVTGTITIDKNRD 356 >UniRef50_C4RKJ8 Extracellular ligand-binding receptor n=2 Tax=Micromonospora RepID=C4RKJ8_9ACTO Length = 394 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 13/332 (3%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGV-EYDDACDPKQA 81 A D+K+ G ++G A G NG + AI N D V + EYD DP +A Sbjct: 45 ACDLKIGFFGPLTGDAAGLGIHMRNGTKLAIDQYNKD---NADCKVNLAEYDSQGDPAKA 101 Query: 82 VAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 A+A + V D + +IG S ++ A I+++ G+ +I+P AT P L+ + ++ R Sbjct: 102 PALAQQAVGDTKVVGIIGPAFSGESEVADPIFDEAGLPIITPSATRPSLSTKNWKIFHRG 161 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 G D+SQGP A +YI +K +++ ++ D+ YG GL V+ L A D + Sbjct: 162 VGNDTSQGPAAGRYIKNVMKAEKVYVVDDQSAYGAGLVDEVKKVLGAVAGE----DKVQV 217 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 + +FSA++ ++ +++GGYY E G +L+Q + G K + +GV +A+ +A Sbjct: 218 KQTNFSAVVTKIVGSGATVLFFGGYYTEAGLLLKQLKGAGWKGTMVAGDGVNDANFIKVA 277 Query: 261 G-DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE--RT 317 G AEG ++T P + D A + G Y ++Y + ++ ++ Sbjct: 278 GQQVAEGTVLTCPCAPATAAKGTFVTDYKSAFENAEPGTYADVSYDITKIFLEGIKSGKS 337 Query: 318 GSDEPLALVKDLKANGANTVIGPLNWDEKGDL 349 + LA VK G T + ++ G+L Sbjct: 338 TRADLLAFVKSYNKAGTATGV-TYKFESNGEL 368 >UniRef50_B1LSS9 Extracellular ligand-binding receptor n=6 Tax=Methylobacterium RepID=B1LSS9_METRJ Length = 378 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/342 (28%), Positives = 168/342 (49%), Gaps = 12/342 (3%) Query: 27 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVAN 86 ++ + ++GP A +G GA QA+ D+N G + + V V DD + +QA AVA Sbjct: 25 RIGLSAPLTGPDAAYGQGLRQGAEQAVADLNRAAGGR-PRWVLVPADDGGEARQAAAVAK 83 Query: 87 KIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSS 146 K D ++ V+G L S + A+ +YE+ G ++++P A LT R ++ R D+ Sbjct: 84 KFAADNVRLVVGPLESGAVAAAAPVYEEAGAVVVAPAAAYGPLTGRSLWNLFRLGPSDAQ 143 Query: 147 QGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFS 206 QG A Y+ + +R+ I+ D+ +G GLA +V LK A V FDG G +D + Sbjct: 144 QGRAAGGYLAKAFAGRRVGIVSDRSTFGRGLADAVAARLKEAGTPEVLFDGFPRGTRDLA 203 Query: 207 ALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEG 266 L+ARL+ D VY+GG PE +L R GL + +G+ + + + AG EG Sbjct: 204 DLVARLRAARPDAVYFGGLAPEAATLLHAMREAGLGATLVASDGILDPAFAAAAGGDGEG 263 Query: 267 MLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP---- 322 ++T+ + P +G A ++ + + YAAV+ LA A ER + +P Sbjct: 264 TVMTLVPDPPRLPEPRGSRPAPRSPEAE---SVAAGAYAAVELLAQATERARAADPKTGR 320 Query: 323 ----LALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 + + ++ + T++G + +D +GD G + W Sbjct: 321 IADGRKVAEAVRTGPSRTLLGSVAFDARGDRSGAPIALRIWR 362 >UniRef50_D2L0G3 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0G3_9DELT Length = 389 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 102/353 (28%), Positives = 162/353 (45%), Gaps = 17/353 (4%) Query: 13 IALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGV 70 + L +S T D IK+AV +G A +G+ G I +INA GG+ G KL V Sbjct: 18 LTLGLSATGARADGTIKIAVPSPYTGSAAGYGENVKAGVAMKIDEINAAGGVGGKKLEAV 77 Query: 71 EYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL 129 D+ C+P++A V++ I ND I ++GHLCSS+ A Y EG+ ISP AT+ + Sbjct: 78 YLDEQCEPREAATVSSSIANDPDIVGIVGHLCSSAQLAALPTYVREGVPAISPTATSVAI 137 Query: 130 T-----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDG 184 + ++G R D QG A Y+ + + +++AI ++ YG GL + Sbjct: 138 SDKNKDEKGKVWAFRNVYRDDFQGKFLADYVDKVLGLKKVAIFYENNDYGIGLKDAFVKE 197 Query: 185 LKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ 244 K +V + G++D++ + +LK ++ GYYPE + QA+ +GL Sbjct: 198 GKKLGLTIVGEEAYKKGDQDYTPQLTKLKSAAPQAMFIAGYYPEGALIADQAKKIGLSVP 257 Query: 245 FMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN-QGIVDALKADKKDPSGPYVWIT 303 G +G NA + G A + +T P + A+ + ++ KA K Sbjct: 258 KFGADGFDNADYMKLGGAAVDDTYLTAPFLAETAGADAKKFIEDFKAKYKREVDWMSANA 317 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKA------NGANTVIGPLNWDEKGDLK 350 Y A LA A+ + G D A ++D A G V G +D GD + Sbjct: 318 YDATGMLAAAIAKAGPDR--AKIRDYLAGMDSPEKGYKGVTGVNYFDANGDCQ 368 >UniRef50_C6J274 Branched-chain amino acid transport system,substrate-binding protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J274_9BACL Length = 375 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 99/373 (26%), Positives = 174/373 (46%), Gaps = 40/373 (10%) Query: 1 MKRNAKTI-IAGMIALAISHTAMADD-------IKVAVVGAMSGPIAQWGDMEFNGARQA 52 MKR + I G+ A +S +DD I++ + +SG AQ+G NGA A Sbjct: 1 MKRFLSALAITGLAAGLLSGCGASDDSQANRDTIRIGLAAPISGTQAQYGTAFKNGAELA 60 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDI 111 IN GGI G ++ V DD D +AV VANK V D I V+GH SS+T + + Sbjct: 61 AAQINEAGGIDGKQVEIVVQDDKGDSNEAVNVANKFVTDKSILGVVGHFNSSATLATAPV 120 Query: 112 YEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ 171 Y I+ +SP ++ P +T G ++ R D+ Q A + E + ++A+I+++ Sbjct: 121 YNKNKIVQVSPSSSAPAVTNAG-EYTFRVITTDAFQADYLAGWSKE-LGYSKVALIYEQS 178 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 +G GL Q VV + G+KDFS ++ +++++ D ++ GG+Y E Sbjct: 179 DFGLGLLDVYQQSAPENGVEVVAAEAYNPGDKDFSTVLTKIREKQPDAIFIGGFYNEAAL 238 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLV----------TMPKRYDQDPAN 281 + +QA+ + L F+G + + + +L ++ ++ EG + R+D++ Sbjct: 239 IAQQAQKLNLNADFIGVDSLYSEALLDLGKESVEGFKLIGFFYPGGDNAEATRFDEE--- 295 Query: 282 QGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP-----LALVKDLKANGANT 336 +A Y +Y A + A++ G+D L +KD ++ Sbjct: 296 ------YQAKYNSKPDTYAAYSYVATSVIIKAIQEQGTDREAIKSYLETLKDY-----SS 344 Query: 337 VIGPLNWDEKGDL 349 G +++DE GD+ Sbjct: 345 ATGVISFDENGDV 357 >UniRef50_C9R8F6 Extracellular ligand-binding receptor n=1 Tax=Ammonifex degensii KC4 RepID=C9R8F6_AMMDK Length = 397 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 112/352 (31%), Positives = 177/352 (50%), Gaps = 13/352 (3%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDA 75 A A A ++K+ + +MSG + G + R A+ +INA+GGI G K+ DDA Sbjct: 31 ATQEKAPAGEVKLGCILSMSGQLGPMGKKMADAVRLAVDEINAQGGINGKKIKLYLEDDA 90 Query: 76 CDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-QRG 133 DP A+ A K+V +G+K +IG + SS+ + + ++MISP AT PELT Q Sbjct: 91 TDPVTALNAAKKLVEVNGVKLLIGGMSSSAAKTMGPFLAERKVIMISPSATAPELTGQPW 150 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 +++ RT D QG A+ L+ +++ I+ YG GL ++ L+ A V+ Sbjct: 151 RKYLFRTCPSDIYQGKLMAQIALDQ-GAKKVVILAMDNTYGIGLGEEIKKALE-GKAQVL 208 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL-KTQFMGPEGV- 251 F +KD+ + + ++K N D V + GY + + +QA ++GL K +++G +GV Sbjct: 209 AFIKYDPKKKDYRSELTQIKALNPDAVAHVGYNEDGRIIYQQALNLGLDKMKWIGCDGVY 268 Query: 252 GNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADK-KDPSGPYVWI--TYAAVQ 308 G+ N A AAE M TM P NQ +A K K + P V+ Y AV Sbjct: 269 GSGMFENPA--AAEFMAKTMSGTRPASPENQAYEKFRQAYKAKFNTEPEVFCDTIYDAVN 326 Query: 309 SLATALERTGSDEPLALVKDLKANGANT--VIGPLNWDEKGDLKGFDFGVFQ 358 LA A + GSD+ + + L G N V G + +D+ GD G F +++ Sbjct: 327 LLAKACAQAGSDDADKIREALLKIGQNYPGVSGSITFDQGGDRVGGYFEIWK 378 >UniRef50_B4UJL7 Extracellular ligand-binding receptor n=12 Tax=Bacteria RepID=B4UJL7_ANASK Length = 404 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/248 (31%), Positives = 130/248 (52%), Gaps = 5/248 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ-AV 82 D I + VG+++G A +GD G + AI+++NAKGG+KG L YD+ P++ A+ Sbjct: 43 DRILLGHVGSLTGSEATFGDSTDKGIQLAIEEVNAKGGVKGKPLALKTYDNQGKPEESAI 102 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ---RGYQHIMR 139 A ++ D + ++G + S+ + + I + + MI+P +TNP +T+ R + R Sbjct: 103 AATRLVLQDRVSVLLGEVASTRSLAMAPIADANHVPMITPSSTNPRVTKENGRVRPFVFR 162 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGI 198 +D QG AK+ + +K R+A++ D Y GLA K +V Sbjct: 163 VCFIDPFQGTVMAKFARDHLKISRVAVLRDVGNDYSMGLADFFLAKFKELGGTIVDDQSY 222 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 AG++DF A + +K + + +Y GYY ++ + RQAR +G+K MG +G +A L Sbjct: 223 KAGDQDFKAQLTTIKGKGPEAIYVPGYYTDVALIARQARELGMKQPLMGGDGWDSARLYE 282 Query: 259 IAGDAAEG 266 I G A EG Sbjct: 283 IGGKALEG 290 >UniRef50_B9Y8T3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8T3_9FIRM Length = 407 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 94/339 (27%), Positives = 161/339 (47%), Gaps = 15/339 (4%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S T A +K+ + ++G +A +G E NG+ AIK NA G +K V+YD+ D Sbjct: 42 SGTDAAGAVKIGLHYELTGGVADYGKAELNGSLLAIKQANAAAG--SEKYGYVKYDNKSD 99 Query: 78 PKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT-------NPE-L 129 +AV +A ++ +DG+ V+G S ++ + I D + ++SP AT NP+ Sbjct: 100 STEAVTLAAQLASDGVAGVVGPATSGASAASYQILNDAKVPVLSPSATQNNVTLTNPDDA 159 Query: 130 TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAA 188 + Y ++ R DS QG A+Y +T+ + I D Y +GL+ + + Sbjct: 160 SSAAYDYVYRVCFEDSYQGAAMAQYAYDTLGKTKAVIYGDSTTDYAKGLSEAFEKQFTKL 219 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 +V + + + DFS+++ ++K + D +Y GYY E G +++QAR +GL G Sbjct: 220 GGTIVGKENYVSKDTDFSSVLTKIKGMDFDVLYIPGYYNEAGLIIKQAREMGLDQTITGS 279 Query: 249 EGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN---QGIVDALKADKKDPSGPYVWITYA 305 +G + +L ++ G AA V Y A+ Q +DA KA+ + + + Y Sbjct: 280 DGFDSTTLVDLGG-AANLNDVYFTTAYTTVGASDKLQAFIDAYKAEYNEEPNMFSALAYD 338 Query: 306 AVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWD 344 A L A+E GS + A+ L + V G +D Sbjct: 339 ATNVLIQAIEEAGSSDGPAVQAALTKISFDGVTGAFTFD 377 >UniRef50_B8FZ96 Extracellular ligand-binding receptor n=3 Tax=cellular organisms RepID=B8FZ96_DESHD Length = 380 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 100/322 (31%), Positives = 155/322 (48%), Gaps = 14/322 (4%) Query: 37 PIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKY 95 P A D+ G A+++IN +GG++G KL V+ DD + ++ +A+A N GI+ Sbjct: 42 PFASLDDLFAEGLELAVQEINEQGGVQGRKLSLVKADDEAELEKGLAIAQAFADNAGIQA 101 Query: 96 VIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYI 155 VIGH S + PA+ IY+ G++M+SP +T+P+LT GY H+ R D A Y+ Sbjct: 102 VIGHRNSFISIPAASIYDQAGLVMLSPASTSPDLTDHGYIHVFRNIPSDQEIARQLAIYL 161 Query: 156 LETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKE 215 E +R+ I + YG GLA + +D +A +V KD L + + Sbjct: 162 AEQ-GHERMVIYYTDDSYGNGLANAFEDYARAQGITIVDRFNYYGNLKDLERLYDKWQAF 220 Query: 216 NIDFVYYGGYYPEMG-QMLRQARSVGLKTQFMGPEGVGNASLS----NIAGDAAEGMLV- 269 +D ++ G + L A+SVG++ + SL+ NI G AEG+LV Sbjct: 221 GMDGIFIAKTATGGGTEFLVDAKSVGIEVPLIAGNSWDALSLTEDIENI-GMTAEGLLVG 279 Query: 270 --TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVK 327 P+R D Q V+A + + P Y Y AV LA ALE++ P L + Sbjct: 280 SFFNPQR--PDSRTQDFVEAFRREYGQPPTSYAAAGYDAVILLAEALEKSDLTHPATLAQ 337 Query: 328 DLKANGA-NTVIGPLNWDEKGD 348 L+ G V+G +D +GD Sbjct: 338 GLRDLGPWEGVMGMHRFDGRGD 359 >UniRef50_C0CMD4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CMD4_9FIRM Length = 387 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 166/333 (49%), Gaps = 11/333 (3%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 +D I + M+G +A G+M G + A+ + N GGI G ++V DD +P QA Sbjct: 41 SDTITIGASLPMTGSVALNGEMILEGIQMAVDECNEAGGIDGKEVVIDAQDDQAEPNQAA 100 Query: 83 AVANKI-VNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 +VAN + ++ I +IG L SS T A+ IYE+ G++ +SP +++PE+T G ++I R Sbjct: 101 SVANMMSADEKIVAIIGSLKSSCTLAAAPIYEEAGVVALSPDSSSPEVTNAG-EYIFRIK 159 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 D T AK + + AI+++ YG G+ Q ++ A +V + I G Sbjct: 160 NSDVVLAQTMAKGAISD-GHTKFAILYENNDYGAGVLEQSQIAIEEAGCEIVCTESILTG 218 Query: 202 EK-DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 E+ DFS++I+++++ D + G Y E G +++Q + GL +G+ + + Sbjct: 219 EQTDFSSIISKIRESGADAILMGVDYNESGLVMKQMKDAGLDLPRYATDGLFTDAFIEVG 278 Query: 261 GDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWIT--YAAVQSLATALERT 317 G+AA+G V T DQ Q + + +K D P ++ Y + + A+E Sbjct: 279 GEAADGTTVLTSFITSDQSENVQNFIKKYQ-EKYDGEMPSIFQAEGYDCGKIVIEAIENA 337 Query: 318 GSDEPLALVKDLKANGA-NTVIGPLNWDEKGDL 349 G+D ++D A + V G +DE GD+ Sbjct: 338 GTDRK--AIRDYMATMSYQGVTGDCTFDENGDV 368 >UniRef50_B5YDP1 Branched chain amino acid ABC transporter n=2 Tax=Dictyoglomus RepID=B5YDP1_DICT6 Length = 376 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 172/352 (48%), Gaps = 11/352 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAM--ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 MKR K +I ++ ++ + A IK+ + ++GP+A +G NGA+ A+++ NA Sbjct: 1 MKRFVKILIIALVIFSLFVLPLQAAGTIKIGGIFPITGPVATFGISCANGAKMAVEEANA 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGI 117 KGG+ G K+ + DD ++A A K++ D + ++G + SS I + + Sbjct: 61 KGGVLGSKIELIIEDDQYKLEEAANAARKLIERDKVVAIVGGVTSSEALTIGPIAQSSKV 120 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEG 176 ++++ ATNP++TQ G I R LD QG A + + +K + A++ Y +G Sbjct: 121 VLVTGTATNPKVTQVG-DFIFRVCFLDDFQGEVMANFAYKNLKAKTAAVLTAVTSDYSKG 179 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + + A +V + + G+ DF A + ++K DFV+ GYY ++ +L QA Sbjct: 180 LADAFKKKFTAIGGKIVADESYSEGDTDFRAQLTKIKALKPDFVFVPGYYSDVAPILNQA 239 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALK-ADKKDP 295 R +G+ F G +G + L A AAEG + + D + + +K KK Sbjct: 240 RELGITVPFGGGDGWDSPELLKQAAKAAEGCFYS--NHFTPDAKDLLVQTFVKNYTKKYG 297 Query: 296 SGP--YVWITYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNWD 344 P + Y A++ L +++ GS +P+ + + L + V G + +D Sbjct: 298 MAPDALAALKYDAMKFLLEGIKKAGSADPVKIKEALASMKTFRGVTGSMTFD 349 >UniRef50_C0GH32 Extracellular ligand-binding receptor n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH32_9FIRM Length = 387 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 96/336 (28%), Positives = 156/336 (46%), Gaps = 7/336 (2%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S+ A++IK+ VG ++G A +G G AI + N GGI G ++ + D D Sbjct: 37 SNNGDAEEIKIGTVGPLTGGAASYGVSVRRGVEIAINEANEAGGINGAQIRLIPEDTGGD 96 Query: 78 PKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 +A +K++ D + +IG + SS T + D G+ MISP +T + Q G ++ Sbjct: 97 ATEAANATSKLIEQDNVSVIIGAVLSSETFAGAPFANDAGVPMISPASTATGIPQEG-EY 155 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 I R D Q A+Y + + R A++ YG L R VV Sbjct: 156 IFRNTLADEVQAAQLAEYASDELGVSRFAVMFTNNDYGVAL-RDAFVATAEGLGEVVEIQ 214 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 T G+ DFSA + R+ + N + ++ GGYY E ++ +QA+ GL Q +G +G + L Sbjct: 215 SFTDGDDDFSAALTRIAQGNPEALFIGGYYEEAARIAQQAQEQGLDVQILGADGFYSPVL 274 Query: 257 SNIAGDAAEGMLVTMPKRYDQDPANQ--GIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 N+ GDA EG + T YD D A+ V + + + + Y A + + A+ Sbjct: 275 VNLGGDAVEGAIFT-AAFYDGDTADAVVNFVSKFQEEFGETPDMFAAQAYDAARIVLQAI 333 Query: 315 ERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGDL 349 E GS + A+ L A + G ++D +GD+ Sbjct: 334 ETAGSGDSAAIRDALAAIQDFPGITGVTSFDGEGDV 369 >UniRef50_C0QGJ8 ABC-type transporter, substrate-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QGJ8_DESAH Length = 391 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 95/355 (26%), Positives = 166/355 (46%), Gaps = 6/355 (1%) Query: 8 IIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFN-GARQAIKDINAKGGIKGD 65 ++ G I AI A A+D + +A+ G M G G +++N G A++ + + + G Sbjct: 30 VVIGAILAAIPRQASAEDTVTIAIAGPMVGNSFSVG-IQYNVGVTAAVQTLPGRL-LLGK 87 Query: 66 KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT 125 K+ + YDD C A VA +V VIGH CS +T A+ IY +L I+P +T Sbjct: 88 KVSIITYDDKCSIPVAEKVAQDLVLKPPAVVIGHSCSMATIEAAPIYAHHNVLQITPAST 147 Query: 126 NPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGL 185 NP++T+ G + I R G D QG AA+ I +++ I + Y EGLAR+ + L Sbjct: 148 NPKITEMGIETIFRMIGRDDVQGEVAAERISIYHADKKVGIFYFPGGYSEGLARTAINAL 207 Query: 186 KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQF 245 V+ A ++ I + ++ +Y G + G +RQ + Sbjct: 208 GKKGIKPVYAGIGIASASSYAENIQDIIDAGVEILYLIGGGLDSGVFMRQGSQMDAPFHV 267 Query: 246 MGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYA 305 +G + + + AG A EG+ T P + ++ V A+K ++P+G Y + YA Sbjct: 268 IGSDTLVSKVFIETAGLAGEGIPFTFPPEAAELSTSKVAVAAIKQLGQEPAG-YTLLAYA 326 Query: 306 AVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 A ++ + R S + + ++ T++G +++D KGD+ + F W+ Sbjct: 327 ATETWIEGVRRAKSFDANLVASAIRQAPIETILGRISFDTKGDINT-TYPAFSWY 380 >UniRef50_A8TTJ6 Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTJ6_9PROT Length = 401 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 165/330 (50%), Gaps = 3/330 (0%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A+ I++ ++G A G NGA A++ INA GG+ G L V YDD PK+ V Sbjct: 43 AEPIRIGFNVPLTGFAAADGASAKNGAELAVEQINAAGGVGGRMLELVSYDDQASPKEVV 102 Query: 83 AVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 +ANK++ D + I S+ T+ A+ I++ + IS A +P++T+ G ++ RT+ Sbjct: 103 PIANKLIEQDKVTAAISGSYSAPTRAAASIFQSAKVPYISAYAIHPDITRAG-DYVFRTS 161 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 + QG AK + + +K +R+ +I + +G+ LA ++ VV + Sbjct: 162 FMGEVQGRAGAKLVGDILKKKRVVMITLQNDFGKSLADGFKEAAGTFGVEVVAEYEYSIK 221 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 ++ F ++ R+K + + +Y GY+ G ++ Q R+ G+ +G EG + IAG Sbjct: 222 DRQFGPIVTRVKADAPEVIYASGYFFTAGPLVSQLRAAGIDVPVIGQEGYDSQKFIEIAG 281 Query: 262 DAAEGMLVTMP-KRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 A+EG+++T R +DP + + A + P+ + AV+ LA AL GS Sbjct: 282 AASEGVIITTSLDRDSKDPEARDFIAAFEKKAGYPADMVAASGHTAVKVLAAALGAAGST 341 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLK 350 +P A+ + + G ++++ G+++ Sbjct: 342 DPQAIRDAIAKSHVKASTGTISFNGLGEVE 371 >UniRef50_C7HSH7 Branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Bacteria RepID=C7HSH7_9FIRM Length = 392 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 82/330 (24%), Positives = 161/330 (48%), Gaps = 11/330 (3%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 +D IK+ + +GP++ +G+ GA A+ +IN GGI G K+ + YDD + + Sbjct: 38 SDTIKIGAIIPQTGPVSNYGNSSEKGALLAVDEINKNGGINGKKIEWISYDDKGEITDST 97 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 NK+ + + ++G + S S+I + +GI MI+P T +T+ G ++ RT Sbjct: 98 TAYNKLKGEKVTAIVGPITSKPALAVSEIAKKDGIAMITPTGTQGNITE-GKDNVFRTCF 156 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 D QG AK+ E K +++AI+ + Y G+A + ++ ++V + Sbjct: 157 TDPYQGKLLAKFAAENQKAKKVAILRNTSSDYSNGIADEFKKEVEKLKLDLVADESYGDN 216 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 + DF A + ++ K D + YY ++ + QAR G+ +F+G +G + N+ Sbjct: 217 DNDFKAQLTKIAKAKPDVLLVPDYYEKVALIAPQARDAGIDAKFIGSDGWD--GVVNVMD 274 Query: 262 DAAEGML--VTMPKRYDQDPANQGIVDALK----ADKKDPSGPYVWITYAAVQSLATALE 315 + G++ + D +Q + D +K +K+DPS + ++Y + L A+E Sbjct: 275 KSQLGLVEGSCFSNHFALDSDDQRVKDFVKKYKEENKEDPSA-FSALSYDTIYLLKQAIE 333 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDE 345 + S+E +++ +KA + + G ++E Sbjct: 334 QAKSEESDKIIEKIKAIEFDGITGKFKFNE 363 >UniRef50_B5HG53 Extracellular ligand-binding receptor n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HG53_STRPR Length = 386 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 100/371 (26%), Positives = 166/371 (44%), Gaps = 23/371 (6%) Query: 6 KTIIAGMIALAISHTAMAD----------DIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 KTI+ I LA+ A+ +K+A G +SG G+ NG + AI Sbjct: 4 KTIVKLAIPLAVGALALTGCGSDSGSGDGAVKIAFQGPLSGDNVALGENMQNGVKLAIDQ 63 Query: 56 INAKGGIKGDKLVGVEY---DDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDI 111 NAKG D +EY DD P +A A A KI++D G+ V+G S T +S + Sbjct: 64 ANAKG----DLDFKIEYVAGDDQGLPDKATATAQKIIDDPGVVAVVGPAFSGPTNTSSPL 119 Query: 112 YEDEGILMISPGATNPELT--QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD 169 Y + G++ +SP ATNP LT + G+ +R D+ QG A Y + ++ +++ ++ D Sbjct: 120 YAESGLVTVSPSATNPLLTDKENGFTSFLRGVPNDNMQGAGMATYYAKKLQAKKVYLVDD 179 Query: 170 KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEM 229 K YG GLA + GLK A VV + D+SA + D + Y GYY + Sbjct: 180 KTDYGVGLATVAEKGLKDAGIEVV-KKSVPQKTPDYSATAKDVVNSKADALIYAGYYQDA 238 Query: 230 GQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDAL 288 ++ + G K + +G + +AGDA+E +T P + + + Sbjct: 239 APFAKKLKDAGYKGAAISGDGTNDMKFVELAGDASENWFLTCPCTDATVEAGTKKFAEDY 298 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA-NTVIGPLNWDEKG 347 + + G Y Y + +++ G+D ++D A + + ++ E G Sbjct: 299 QKEFGRAPGTYSAEAYDIANMIIAEVKKAGADVEREALRDALAKASYKGLTKTFSFGENG 358 Query: 348 DLKGFDFGVFQ 358 + KG D ++Q Sbjct: 359 EFKGTDVYLYQ 369 >UniRef50_B9L7B1 High affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=2 Tax=Nautiliaceae RepID=B9L7B1_NAUPA Length = 379 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 88/267 (32%), Positives = 138/267 (51%), Gaps = 6/267 (2%) Query: 6 KTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGD 65 K + G+ AL ++ T A +IKV V+ ++GPIA +G +G + + N GD Sbjct: 4 KLLALGLSAL-VASTLAAKEIKVGVLQPLTGPIASFGQKTLDGIKLVHEKYNTLPN--GD 60 Query: 66 KLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 K+V V D D Q V ++V+ + + V G L SS + ++ A Sbjct: 61 KIVLVVVDGQFDKVQTVNGYKRLVSGEKVVAVEGPLASSMSLSIKRFAGATKTPTVTQIA 120 Query: 125 TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDG 184 TNP +T +G ++I R D QG AAKY L+ + + KQ Y GLA++ + Sbjct: 121 TNPRVT-KGSKYITRACFTDDFQGTVAAKYALKHNLKTAVIVFDMKQDYSVGLAKAFEKA 179 Query: 185 LKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ 244 K V+ I +G+KDF+A +A++KK N DF+Y Y PE G ++RQ R+ G+ + Sbjct: 180 YKKDGGKVLKKLFINSGDKDFNAQVAQIKKLNPDFIYTPIYAPEEGLLVRQLRAAGVNSP 239 Query: 245 FMGPEGVGN-ASLSNIAGDAAEGMLVT 270 MG +G+ + A L +AG AA G++ T Sbjct: 240 VMGGDGIADPALLKKLAGKAANGVMYT 266 >UniRef50_A8LXP7 Extracellular ligand-binding receptor n=3 Tax=Salinispora RepID=A8LXP7_SALAI Length = 383 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 98/330 (29%), Positives = 153/330 (46%), Gaps = 20/330 (6%) Query: 27 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGV-EYDDACDPKQAVAVA 85 K+A+ GA SGP + A+ A+K N D V + E+D DP +A VA Sbjct: 41 KIAMFGAYSGPNSGLAIPALKSAQLAVKQHNEA---NPDCEVTLQEFDTKGDPTEATPVA 97 Query: 86 NKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 N++ D VIG S ++ D+YE ++M+SP +T ELT G + R G D Sbjct: 98 NRVAGDASFLGVIGGAFSGESKATMDVYEAAEMVMVSPSSTAIELTAGGNEVFHRVVGND 157 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 + QG AA Y+ + V+ +++ +I+D YG G+ + L D + + + Sbjct: 158 AVQGAAAAVYLRDVVRARKVFVINDGTTYGAGITDELTRALGELAGGT---DQVQEKQVN 214 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 F+A I+++K D + YGGY E +++Q R G+ F+G +G+ + S AG +A Sbjct: 215 FAATISKIKAAAPDAIAYGGYSNEAAPLVKQMREAGVTATFLGLDGIYDPSFPEGAGASA 274 Query: 265 EGMLVT---MPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER--TGS 319 EG +VT +P D A +A+ P GP+ + A L L T Sbjct: 275 EGAIVTCLCLP----SDKAGGTFAADFEAEYGVPPGPFGAEGFDAANVLIEGLAEGNTTR 330 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDL 349 + LA V G V L +DE GD+ Sbjct: 331 KDLLAWVDSYDKEG---VSKSLKFDENGDV 357 >UniRef50_A5IN43 Extracellular ligand-binding receptor n=9 Tax=Thermotogaceae RepID=A5IN43_THEP1 Length = 370 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 160/331 (48%), Gaps = 16/331 (4%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ V+ M+G I+ +G M + G + A ++ K + G+K+ + D + +A A Sbjct: 21 VKIGVILPMTGGISAFGRMVWEGIQIAYEE---KPTVLGEKVELLLLDTRSEKTEAANAA 77 Query: 86 NKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 ++ ++ + + +IG + S+ + + I E+ + MI+P +TNP +TQ G + + R +D Sbjct: 78 SRAIDKEKVLAIIGEVASAHSLAVAPIAEENKVPMITPASTNPLVTQ-GRKFVSRVCFID 136 Query: 145 SSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANV--VFFDGITAG 201 QG A + + + +R+ + D +Q Y GL+ +D V VFF +G Sbjct: 137 PFQGVAMAVFAYKNLGAKRVVVFTDVEQDYSVGLSNFFKDKFTELGGQVKRVFF---RSG 193 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 ++DFSA ++ N D +Y GYYPE+ + RQAR +G + +G L I G Sbjct: 194 DQDFSAQLSVAMSFNPDAIYITGYYPEIALISRQARQLGFTGYILAGDGADAPELIEIGG 253 Query: 262 DAAEGMLVTM---PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 +A EG+L T PK +P + V+ K + Y A L A+ER G Sbjct: 254 EAVEGLLFTTHYHPKA-ASNPVAKKFVEVYKEKYGKEPAALSALGYDAYMVLLDAIERAG 312 Query: 319 SDEPLALVKDL-KANGANTVIGPLNWDEKGD 348 + + +++ K N G +N DE GD Sbjct: 313 GFDTEKIAEEIRKTEDFNGASGIINIDENGD 343 >UniRef50_C9NK09 Extracellular ligand-binding receptor n=3 Tax=Streptomyces RepID=C9NK09_9ACTO Length = 411 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 99/343 (28%), Positives = 151/343 (44%), Gaps = 41/343 (11%) Query: 51 QAIK---DINAKGGIKGDKLVGVEY-----DDACDPKQAVAVANKIV-NDGIKYVIGHLC 101 Q IK D+ AK K +++ G+E+ DD P A A K+V N + +G L Sbjct: 59 QGIKNSVDLAAKTANKNNEVPGIEFKIEALDDQAVPASGQANATKLVGNKDVLGAVGPLN 118 Query: 102 SSSTQPASDIYEDEGILMISPGATNPELTQ----------RGYQHIMRTAGLDSSQGPTA 151 S Q ++E + +SP TNP L+Q R ++ RT D QG A Sbjct: 119 SGVAQSMQGVFEKADMAQVSPANTNPALSQGDNWGKGDSKRVFKTYFRTCATDVVQGKFA 178 Query: 152 AKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIAR 211 A+Y+ K +++ ++ DKQ YG GLA VV D +T E DFS+ + Sbjct: 179 AQYLFNDAKKKKVYVVDDKQTYGAGLAAIFSAEFTRLGGKVVGTDHVTVKETDFSSTADK 238 Query: 212 LKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVT- 270 +K D VYYGG YPE G + Q + G K MG +G+ + + + +G+A +G T Sbjct: 239 VKSSGADSVYYGGQYPEGGLLSDQIKKTGAKIPTMGGDGIYDPAFISASGEANDGDFATS 298 Query: 271 -------MPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPL 323 +P A Q I D KDP Y +Y A ++ A++ +D Sbjct: 299 VGYPVEALPT------AKQFISDYNAGGYKDPFAAYGGYSYDAGWAIIQAVKAVVADNDG 352 Query: 324 ALVKDLKAN--------GANTVIGPLNWDEKGDLKGFDFGVFQ 358 L +D +A + V G +++DE GD V++ Sbjct: 353 KLPEDARAKVTEAMAKVSFDGVTGKVSFDEFGDTTNKQLTVYE 395 >UniRef50_A9AXZ7 Extracellular ligand-binding receptor n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXZ7_HERA2 Length = 383 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 2/248 (0%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A+ IK+ G MSG A G A+ AI NA + G + YDD DP QA+ Sbjct: 29 AETIKIGFFGPMSGNSASDGTHSMYAAKLAIDQANANQTVPGKTFELITYDDQLDPNQAI 88 Query: 83 AVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 VA K+V D ++ VIG SS+T+ A+ +++ GI M++ AT+PE+T+ G I R Sbjct: 89 TVAQKLVTEDKVRAVIGGSYSSTTRAAAPVFQQAGIPMLAAYATHPEVTKTG-SMIFRVI 147 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 + + QG A Y + + +++ YG + + +A ++ +V + Sbjct: 148 YITTVQGNALAVYATTKLNYRNFHVLNINNDYGRSITEAFTKTAQANHSTIVSASEYASD 207 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 DFS+ IA +K + D + GYY + +++Q R G+ +G +G+ + SL + G Sbjct: 208 ATDFSSQIATIKAKPADALILVGYYAQSADIIKQVRQAGITLPIIGSDGLDSPSLVELGG 267 Query: 262 DAAEGMLV 269 EG+++ Sbjct: 268 SDVEGVIL 275 >UniRef50_Q13IE6 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13IE6_BURXL Length = 376 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 151/348 (43%), Gaps = 2/348 (0%) Query: 15 LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDD 74 LA A+ +++ ++ ++G +A G + NGA+ A+ +IN GG+ G + D Sbjct: 13 LACQAARAAEPVRIGLIQPLTGSVAYNGHADVNGAKLAVAEINKAGGVLGRPVELKIEDG 72 Query: 75 ACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG 133 C+P V A K++ D + +IG CSSST + + + +++ ++ +LT++G Sbjct: 73 QCNPANTVNAAEKLIQKDRVSALIGAFCSSSTAAIMPVAQKYHLPLVTGVSSEADLTEKG 132 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 R A D A I+ T++ + +A + +G G + Q L+A V Sbjct: 133 NPWFFRAAETDQLLAHAFAPTIIRTLQLKSVAYVGVNDDWGRGSVQEFQQSLQAGGVKTV 192 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 D G DF L+ +L+ D V+ + +++Q + +GL + G Sbjct: 193 STDYFDHGATDFYTLLTKLRASGADAVFVAAETQDGSILVKQIKELGLHIKVFGVGSWAT 252 Query: 254 ASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 A ++AG AAEG+ +P P N V + + K G Y Y AV+ +A Sbjct: 253 ADFIDLAGPAAEGVYAAVPYASTLTTPENTAFVASYQTAYKAAPGKYSAAGYNAVEIVAK 312 Query: 313 ALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 A+ R GS + + L G + KG GF + Q H Sbjct: 313 AIARAGSTDADKIRAALAQTDFAAPNGRYRFTAKGQAYGFSVVLVQIH 360 >UniRef50_B1L6B9 ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6B9_KORCO Length = 401 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 95/353 (26%), Positives = 171/353 (48%), Gaps = 20/353 (5%) Query: 8 IIAGMIALAISHTAM----ADDIKVAVVGAMSGPIAQWG-DMEFNGARQAIKDINAKGGI 62 I+ ++A A+ M A +K+ ++ ++G +A+ G DM+ A A+++IN+KGGI Sbjct: 14 IVVILVAAAVFFLTMQPKEAGTVKIGLIAPLTGSLAEHGLDMK-QAALLAVEEINSKGGI 72 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSST---QPASDIYEDEGIL 118 G K+ V D AC A A K++ D + ++G CS+ T QP I E++ +L Sbjct: 73 LGKKVELVIEDTACKADLATAAVQKMITQDNVYAIVGEYCSTVTLAVQPT--IMENKKLL 130 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 ++ P + ++T++GY++ R+ Q A +I+E +KP+ A++ YG Sbjct: 131 LV-PVSVATKITEQGYKYTFRSCANQWMQTTQRADWIVEHLKPKTAAMLGINDDYGREGL 189 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + + +KA +V + AG DF+ ++++K N D ++ + +L+QA Sbjct: 190 KIWGERVKAKGVTIVAEEYFDAGTTDFTPQLSKIKAANPDVIFVVANIRDAANILKQAHE 249 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGML-VTMPKRYDQDPANQGIVDALKADKKDPSG 297 +GL QF GV + +AGD A G++ V+ + + P Q V Sbjct: 250 IGLYKQFSMLGGVTSEEFLKLAGDDALGLVHVSYFEPTSKRPVAQEFVQKFVQKWNRTPA 309 Query: 298 PYVWITYAAVQSLATALERTGS---DEPLALVKDLKANGANTVIGPLNWDEKG 347 Y + A +L +E+ G+ D+ +K +K GA G + +DEKG Sbjct: 310 MYAAGVWDAFMTLKYGVEKAGTWDVDKVAEAIKTIKFEGAQ---GTIYYDEKG 359 >UniRef50_B1I4I1 Extracellular ligand-binding receptor n=4 Tax=Clostridiales RepID=B1I4I1_DESAP Length = 386 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 93/336 (27%), Positives = 164/336 (48%), Gaps = 12/336 (3%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 TA ++IK+ ++ ++G + +G+ N AI++ K G K V DD Sbjct: 33 TAPVEEIKIGLIAPLTGDVKTFGESVKNAFELAIEESGHKVGDFNIKYVIA--DDRNVAT 90 Query: 80 QAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ--- 135 +AV VA+K++ D + ++G + SS T P S++ + G+++ISP ATNP++T G + Sbjct: 91 EAVNVADKLITQDKVSAIVGSVTSSCTIPISEVAQAAGVVVISPTATNPKVTVDGGKRKD 150 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVF 194 +I R +D QG AA++ L+ + + A++ D+ Y GL ++ A VV Sbjct: 151 YIFRACFIDPFQGTVAARFALDELGAKTAAVLFDQGNDYTIGLKDYFKEAFVAGGGQVVA 210 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + + DFSA++ R+ + D ++ YY ++ + +QAR G+ F+G +G + Sbjct: 211 EEAYAKTDTDFSAVLTRIAQLKPDVLFLPDYYQKVSLIGKQARDKGITATFLGGDGWDSP 270 Query: 255 SLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 + A D G D P + VD A + Y A + L A+ Sbjct: 271 EIDWTAMDG--GYFTNHYSPEDPRPEVKEWVDKYTAKYGQTPDALATLAYDATKLLLAAI 328 Query: 315 ERTGSDEPLALVKDLKAN--GANTVIGPLNWDEKGD 348 E+ GS +P A ++D A+ G V G +++DE G+ Sbjct: 329 EKAGSKDP-AAIRDAMASIEGFQAVSGSISFDENGN 363 >UniRef50_Q1J0R2 Extracellular ligand-binding receptor n=2 Tax=Deinococcus RepID=Q1J0R2_DEIGD Length = 398 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 124/258 (48%), Gaps = 2/258 (0%) Query: 12 MIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVE 71 + AL ++ A A IK+A V +SG + G GA A+++ A G LV Sbjct: 14 LSALLLTGAAEAATIKIATVSPLSGSLTPIGSEVKRGAELAVQEQAAAFKALGYDLVLTP 73 Query: 72 YDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT 130 YDD A +A IV D + V+G L SS + + + + MISP +T +LT Sbjct: 74 YDDQASATLAPQIARTIVADKNVLGVVGALNSSVSNVIAQAFGPAKLAMISPASTGDQLT 133 Query: 131 QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANA 190 Q G+ H R DS+QG AA YI E +K + +I D YG GL R + LK Sbjct: 134 QNGWNHFSRVVAPDSAQGVAAADYIAEELKAGSVVVISDNTAYGNGLTRVLMANLKKRKV 193 Query: 191 NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 V + G + + A + R+K + D VY+GG Q+++ R+ G+ FMG +G Sbjct: 194 PVAAYMGASTPAQIAEA-VKRVKASSADVVYFGGTDDTGSQLVKALRAAGVTATFMGGDG 252 Query: 251 VGNASLSNIAGDAAEGML 268 + + S AG A G++ Sbjct: 253 LDSPSFLQRAGIAGAGVV 270 >UniRef50_A1UHF2 Extracellular ligand-binding receptor n=9 Tax=Actinomycetales RepID=A1UHF2_MYCSK Length = 403 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 12/269 (4%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A + +A+ GA++GP A G NG + A+ NA G ++ +D DP++ Sbjct: 71 ATCPPLSIAMAGALNGPDAALGINIKNGVQLAVDKHNAAN--PGCQVQLKTFDTEGDPQK 128 Query: 81 AVAVANKIVNDGIKYVIGHL---CSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 A A+A +IV+D +Y IG + S T D++ G++ + ATN L+++G++ Sbjct: 129 ASAIAPQIVDD--QYTIGLVGPAFSGETNATGDVFNQAGLVAATASATNVTLSEKGWRTF 186 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 R D QGP+ A Y+ T+ Q++ ++ D YG GLA++V++ L A+ Sbjct: 187 FRGLANDGVQGPSVANYLKNTLGHQKVCVVDDSTDYGLGLAQAVRETLGPV-ADPACNIS 245 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 + G+KDFSA + ++K + V++ GYY E ++Q + G + F+ +G + Sbjct: 246 VKKGDKDFSAAVTQVKGASPQSVFFSGYYAEAAPFVQQLKDGGFEGTFVSADGTKDPEFV 305 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQGIVD 286 AG+A++ L++ P PA G D Sbjct: 306 KQAGEASKDALLSCPC----GPATGGFAD 330 >UniRef50_B3W8M3 Branched-chain amino acid ABC transporter, substrate binding protein n=19 Tax=Lactobacillales RepID=B3W8M3_LACCB Length = 397 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 91/288 (31%), Positives = 147/288 (51%), Gaps = 22/288 (7%) Query: 4 NAKTIIAGMIALAISHTAMA--------DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 +A I A M+ALA T A + IK+ V +SG +A +G+ + G A+K Sbjct: 11 SAGVIAASMLALAGCATKSATSKGNTAGNTIKIGVNMELSGAVAGYGEQQKQGIELAVKQ 70 Query: 56 INAKGGIK----GDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASD 110 INA GGIK K+ V D+ A +VA ++ N D + ++G ++ + Sbjct: 71 INAAGGIKVGNTKKKITAVYRDNKSSTSGAASVAAQLANTDKVVAIVGPATTNDGTASIP 130 Query: 111 IYEDEGILMISPGATNPELTQRG----YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAI 166 + M+SP AT+P T + ++ R + QG AA + +T+K + +AI Sbjct: 131 NVTKAAVPMVSPSATDPNFTLQKNGSVQPYVFRACFNNDFQGDHAAIFANDTLKAKNVAI 190 Query: 167 IHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGY 225 I D YG GLA++ + K N+V +G+KDF+A++ +K + ID +Y GY Sbjct: 191 IADNSTDYGTGLAKAFK---KKFKGNIVTTQYYQSGDKDFNAMLTTIKSKKIDAIYAPGY 247 Query: 226 YPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA-AEGMLVTMP 272 Y E+G +++QAR G+K F+G +G+ + L+ IAG A A + T P Sbjct: 248 YSELGLVIKQARQSGIKVPFIGADGMADPKLAQIAGAANATDIYYTTP 295 >UniRef50_A0RN18 Branched-chain amino-acid ABC transport system periplasmic binding protein n=31 Tax=Campylobacteraceae RepID=A0RN18_CAMFF Length = 372 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/268 (29%), Positives = 141/268 (52%), Gaps = 7/268 (2%) Query: 6 KTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK-G 64 K + IAL + + MA +IK+ VV ++G +A +G + G A K + +K G Sbjct: 3 KISLVASIALVAATSLMAKEIKIGVVMPITGAVAAYGQTAWAGIEMANK---LEPTLKNG 59 Query: 65 DKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 D L + D+ D + ++V +D + +IG + + +TQ I +++ + MI+P Sbjct: 60 DTLKLILVDNKGDKVETTTATTRLVSDDKVTGLIGAMVTGNTQQVLQIADEKKVPMIAPA 119 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQ 182 AT +L R ++ R +DS QG + A Y +++ + ++ D+ Y GLA++ + Sbjct: 120 ATADKLLDRA-KYGARVTFMDSFQGTSFATYAAKSLGLKTAVVVVDQSTSYSIGLAKAFK 178 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 + V+ I++G+KDF A+++++ N VY Y+PE ++RQAR +GLK Sbjct: 179 KQYEKDGGKVLKELKISSGDKDFKAIVSQIGSLNPSIVYMPFYHPEAALVVRQARQIGLK 238 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVT 270 TQF +GV N + +AGDA+ G T Sbjct: 239 TQFASGDGVSNDTFIELAGDASNGYFYT 266 >UniRef50_Q2RFK5 Extracellular ligand-binding receptor n=3 Tax=Clostridia RepID=Q2RFK5_MOOTA Length = 399 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/313 (25%), Positives = 153/313 (48%), Gaps = 11/313 (3%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLV-GVEYDDACDPKQAV 82 + I + V +SG +A +G + A ++IN KGG+ G K + + D+ ++A+ Sbjct: 40 NTINIGVNYELSGDVATYGTNSKDAILLAFEEINQKGGVLGGKKINAIVLDNGGKKEEAM 99 Query: 83 AVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-----QRGYQH 136 + A K++ + + ++G S +T AS + + +ISP AT+P++T ++ + Sbjct: 100 SAAAKLITENKVVALLGPATSGATMAASTMATKYKVPIISPSATSPDVTVDPQSKKVRDY 159 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIH-DKQQYGEGLARSVQDGLKAANANVVFF 195 + R +D +Q A++ + + ++ AII+ + +Y +GL + ++ VV Sbjct: 160 VFRVCFIDPTQAIVGAEFATKDLGAKKAAIIYSNSDEYSKGLYKVFKEEFAKDGGQVVAE 219 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 + +G++DF + R+K D +Y YY ++G+++ QAR +G+K +G +G + Sbjct: 220 ESFNSGDQDFRPALTRVKDAGADLIYVPAYYGDVGKIVNQARELGIKVPMLGADGWDSPK 279 Query: 256 LSNIAGDAAEGMLVTMPKRY---DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 L+ AG AA Y D +P Q + A KA + + Y LA Sbjct: 280 LAEYAGGAANLNNTYFTNHYAASDPNPRLQAFIKAFKAKYNKEPDAFAALAYDTAYLLAD 339 Query: 313 ALERTGSDEPLAL 325 A+ R GS +P A+ Sbjct: 340 AINRAGSADPEAI 352 >UniRef50_C8W363 Extracellular ligand-binding receptor n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W363_DESAS Length = 380 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 94/323 (29%), Positives = 149/323 (46%), Gaps = 6/323 (1%) Query: 12 MIALAISHTAMADDIKVA--VVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVG 69 +I + + HT ++ + V+GA + P + ++ G A+ INA GGI G K++ Sbjct: 21 LIVIFVLHTGYSNKKERGDIVIGA-AWPFSSQNELFKEGVELAVDQINAGGGINGHKVLL 79 Query: 70 VEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPE 128 VE DD + VA + VIGH S + AS IYE GI+M+SP +T PE Sbjct: 80 VEKDDKGTVTGGMNVAQSFTKVPNLTAVIGHRFSYISIAASYIYEKAGIVMLSPTSTAPE 139 Query: 129 LTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAA 188 LT++GY++I R D+ A Y + + + I + YG GLA S +D + A Sbjct: 140 LTKKGYKYIFRDIPSDNEIARQLALY-AAGLGHRHMVIYYADDSYGIGLANSFEDYARKA 198 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 +V A +D + A K + D V+ Y P+ Q + +G+ Sbjct: 199 GIEIVDRFSYYADLRDLDRISATWKALDYDGVFMAQYMPDGAQFIADTAKLGISVPVFAG 258 Query: 249 EGVGNASLSNIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAV 307 + + L IAG+AAEG ++ T+ D A + ++ + Y Y AV Sbjct: 259 DAMDTPQLYRIAGNAAEGTVIGTIFNPQDPRQAVKSFINNFYSKYGKMPTQYAAQGYDAV 318 Query: 308 QSLATALERTGSDEPLALVKDLK 330 LA A++ TGS P A+ + L+ Sbjct: 319 NLLAKAVKETGSASPSAVAQKLR 341 >UniRef50_A4J594 Extracellular ligand-binding receptor n=2 Tax=Bacteria RepID=A4J594_DESRM Length = 396 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 81/305 (26%), Positives = 152/305 (49%), Gaps = 7/305 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + IK+ +GA +G A +G G + A +DIN GG+ G K+ +E D + Sbjct: 41 ESIKIGFLGAKNGNHAAFGIPTLEGMKMAAEDINKAGGLLGKKIEIIEEDHGSKNTEGAN 100 Query: 84 VANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 V K++ D + ++G ++ T+ A+ I +++ ++++S GA + + G +I R Sbjct: 101 VTQKLITRDKVVAIVGDPTTAITKIAAPIAQEKKVVLLSAGAVGTGVVENG-DYIFRDTL 159 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 LD+ P KY+ E + +++A+I Y GL++ + L +V I G Sbjct: 160 LDAVAAPAVTKYVKENLGWKKVAVITSMNNDYSVGLSKLFRAALVDNGIEIVAEQSIQDG 219 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 +++FSA + +K++N D + + GYY E G +++ R G+KT +G +G+ L + G Sbjct: 220 DQNFSAQVTAIKEKNPDGIVFTGYYTEGGLFMKEVRKQGMKTVMVGGDGLLGDVLMKMGG 279 Query: 262 DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP----YVWITYAAVQSLATALERT 317 +A EG ++ D++ A + ++A K +G + Y AV +A A++ Sbjct: 280 EAVEGSMIYCGFAADENKAGEKTKKFIEAYKTGNNGTLPDMFAAQGYDAVMLIADAIKAA 339 Query: 318 GSDEP 322 SD P Sbjct: 340 NSDVP 344 >UniRef50_C9ACC1 Branched-chain amino acid transporter n=3 Tax=Enterococcus casseliflavus RepID=C9ACC1_ENTCA Length = 388 Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 88/315 (27%), Positives = 147/315 (46%), Gaps = 13/315 (4%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ +SG +A +G E G A+++INA GG+ G ++ + D+ D +A Sbjct: 35 DTIKIGANLELSGAVAAYGTAEKEGIDLAVEEINAAGGVLGKQIEIISKDNKSDNNEAAT 94 Query: 84 VA-NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ---RGYQHIMR 139 VA N ND + +IG S +T+ A + M++P T+ +T + + R Sbjct: 95 VAANLATNDKVVAIIGPATSGATKAALPNVTRAQVPMVTPSGTDDAITYTSGKVQEFAFR 154 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGI 198 + DS QG AKY E + + I+ D Y GL + ++ +V D Sbjct: 155 SCFQDSFQGTILAKYAAENLDASKAVILGDNSSDYAIGLTEAFKESYPG---EIVLEDNF 211 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 T G+KDF A++ R+K + D ++ GYY E G +++QAR +G+ +G +G G+ + Sbjct: 212 TEGDKDFQAVLTRIKDVDFDVLFIPGYYTEAGLIIKQARELGIDQAIIGADGFGDEKMVQ 271 Query: 259 IAGDAAEGMLVTMPKRYDQDPANQGIVDALKADK----KDPSGPYVWITYAAVQSLATAL 314 AG + + PAN + + A K+PS + + Y AV + A+ Sbjct: 272 TAGAENVSNVYYTGHFSTKAPANDKVEPFVAAFNEKYGKEPSA-FNALAYDAVYMIKQAI 330 Query: 315 ERTGSDEPLALVKDL 329 E S + LA+ L Sbjct: 331 EDQNSADSLAIAAGL 345 >UniRef50_A1HU78 Extracellular ligand-binding receptor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU78_9FIRM Length = 381 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 158/329 (48%), Gaps = 6/329 (1%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 ++ +A+V +SG A +G NG A ++IN GGIKG ++ + +DDA DPKQA A Sbjct: 35 NLVIAMVNPLSGDSATYGVSHKNGMELAREEINKAGGIKGQQIEILFHDDAGDPKQAAAG 94 Query: 85 ANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A K + + ++G SS+T I + + ++ P+L+ ++ R A Sbjct: 95 AQKFADQKNVMAIVGSCLSSNTLAMVPITDKAKLPHSVVSSSTPKLSGMS-KYFFRMAVQ 153 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 D+ G I + + +++AI++ YG+GL ++++ LK VV A +K Sbjct: 154 DAQVGILMGDLIAQKLGAKKVAILYPNNDYGKGLTAAIEETLKKHGVTVVSNQAYLATDK 213 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 D+SAL+ +K + +D + G Y + G + +QAR +GL +G G + IAG A Sbjct: 214 DYSALLTGIKAQGVDALAVAGTYTDGGLITKQARELGLTIPIVGGTGFYSPKFVEIAGKA 273 Query: 264 AEG-MLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 AEG + + + DPA Q V K + + Y + LA A+++ Sbjct: 274 AEGAIFLGAFVASNPDPAVQNFVKKYKEKYNMEPDTFAALGYDQMYVLAEAMKKAAEKGA 333 Query: 323 LAL--VKDLKA-NGANTVIGPLNWDEKGD 348 + ++D A + G + ++++GD Sbjct: 334 ITRENIRDAMAQTNYKGITGTVTFNDQGD 362 >UniRef50_A1SHR8 Extracellular ligand-binding receptor n=1 Tax=Nocardioides sp. JS614 RepID=A1SHR8_NOCSJ Length = 394 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 90/305 (29%), Positives = 145/305 (47%), Gaps = 12/305 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI-----KGDKLVGVEYDDACDPKQ 80 I VAV G M+G +G + +G + A K+IN GGI KG K+ V++DD DP Q Sbjct: 38 ITVAVAGPMTGDNGIYGQDQLSGVQFAAKEINDSGGIPDGPLKGKKIKVVKFDDVADPNQ 97 Query: 81 AVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 +VA KI +D I V GH SS T A IYE G+ + ++NPE+T ++++ R Sbjct: 98 GASVAQKICDDTSIMAVFGHSNSSVTLAAEPIYERCGVPLFVSYSSNPEITAELHENLFR 157 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 T D+ G A + + + +++ +I YG+GL + + +V + Sbjct: 158 TLIDDAKMGSEMASFSHDQLGFKKVGVIASDDDYGDGLKTNFNKTAEEIGLDVAKTVTTS 217 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 A +KDF+ + L+ D + Y + ++QA ++G G + L I Sbjct: 218 AKQKDFTPQLTELRNAGADSLVLLNTYTDAALQIKQADAMGWDVPIFVTPGSNSPELVKI 277 Query: 260 AGD-AAEGMLVTM---PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 AG+ AAEG +V P + PA + + D A+ K P G ++Y + T+LE Sbjct: 278 AGEKAAEGTIVAAVFDPNSSEPGPA-KFVNDFTAANGKGP-GESAAMSYDSFYVFLTSLE 335 Query: 316 RTGSD 320 + D Sbjct: 336 KGAKD 340 >UniRef50_C7NDV1 Extracellular ligand-binding receptor n=3 Tax=Leptotrichia RepID=C7NDV1_LEPBD Length = 372 Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 93/324 (28%), Positives = 154/324 (47%), Gaps = 10/324 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+ V+GA++G +AQ+G NG + +K+INA GGI G K+ VE D D ++A+ Sbjct: 29 IKIGVIGALTGNVAQYGTSTINGFKLKVKEINAAGGINGKKIEIVEADSKGDVQEAINAF 88 Query: 86 NKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 K+V+ D I +G + S + + + + I MI+ T ++T +G + RT D Sbjct: 89 KKMVSQDKIDIFVGEVTSGPSLAIAPLAQQAKIPMITATGTAFDIT-KGKDFVYRTTFTD 147 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QG AKY + + Y GL+ + ++ + V + TA +KD Sbjct: 148 PYQGVVVAKYAKSKGYKSITVLTNTGSDYSVGLSNAFKEQAQKEGIQVK-EEQYTADDKD 206 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 F AL+ ++K N + ++ YY +G +L QA+ +G+ +QFMG +G + +N A Sbjct: 207 FRALLTKVKGYNSEVIFVPDYYNTIGLILTQAKELGINSQFMGGDG-WDGIQTNFGKVAN 265 Query: 265 EGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER----TGSD 320 + + D D Q + A K + K + + Y L TAL+ + D Sbjct: 266 GAVFASQFAPDDPDQNVQKFIAAYKNEYKIDPIIFAALGYDTGTILETALKNVSDLSSKD 325 Query: 321 EPLALVKDLKANGANTVIGPLNWD 344 +K+ NGAN V G L +D Sbjct: 326 AIKEAIKNF--NGANLVTGSLKYD 347 >UniRef50_B1HNQ1 Branched chain amino acid ABC transporter (Substrate-binding protein) n=15 Tax=Bacteria RepID=B1HNQ1_LYSSC Length = 406 Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 159/332 (47%), Gaps = 14/332 (4%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+ +SG +A +G GA A+K+IN GGI G K+ ++ D+ + +A A A Sbjct: 51 IKIGANLELSGNVASYGSSIGLGAELAVKEINDAGGIDGKKIELIKVDNKSENSEATAAA 110 Query: 86 NKI-VNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG----YQHIMRT 140 K+ D + ++ S +T I I +++ T P +T ++ RT Sbjct: 111 IKLATQDKVVAMLAPATSGNTVATVQIANQNKIPIVTGSGTAPNITVNEDGSVNEYAFRT 170 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFDGIT 199 +D QG AA + + + +AI D Y +GLA+S ++ + + +V + Sbjct: 171 CFIDPFQGIVAANFASGELSAKNVAIFADNASDYAKGLAKSFKETMTKSGGKIVKEEAYV 230 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 A + DF + +K N DF++ GYY E+G +++QAR +G+ MG +G + +L ++ Sbjct: 231 AKDTDFRTQLTNIKAANPDFIFIPGYYEEVGLIVKQAREMGIDVPLMGADGWDSPTLVDL 290 Query: 260 AG-DAAEGMLVTMPKRY---DQDPANQGIVDALKADKKDPS-GPYVWITYAAVQSLATAL 314 AG DA +T Y D D Q V A KA D + + + Y ++ +A A+ Sbjct: 291 AGKDALNNTYIT--NHYSAEDPDKKIQDFVKAFKAANGDKAPDAFNALGYDSIYYIADAI 348 Query: 315 ERTGSDEPLALVKDLKAN-GANTVIGPLNWDE 345 +R GS + A+ +L A + V G + DE Sbjct: 349 KRAGSTDGEAIKNELAATKDLSLVTGTFSVDE 380 >UniRef50_A5FZN6 Extracellular ligand-binding receptor n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZN6_ACICJ Length = 373 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 102/354 (28%), Positives = 172/354 (48%), Gaps = 17/354 (4%) Query: 10 AGMIALA----ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGD 65 AGMIAL+ ++H A + I++ ++ M+GP A G + +GA+ A+ +INA GGI G Sbjct: 9 AGMIALSCGLGVAHAA-SGTIEIGMIADMTGPAALSGQHKVDGAKLAVDEINAHGGINGK 67 Query: 66 KLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 K+ + DD + V+ K+ N I +IG + S+ Q A+ Y + G Sbjct: 68 KIKLIVEDDRGQNQAGVSAYQKLAANQNIVAIIGSIRSTIVQ-ATLPYVARYKIPTMIGG 126 Query: 125 TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDG 184 T+P+LT G Q + R D+ T A+Y ++T+ +++AI++D +G + ++ Sbjct: 127 TDPKLTHVGNQWVFRFRPNDTYASATMAQYAVKTMGSKKVAILYDTDAFGSAGNQLLKAA 186 Query: 185 LKAANANVVFFDGITAGEKDFSALIARLKKENID-FVYYGGYYPEMGQMLRQARSVGLKT 243 L A VV G T +D+++ + ++K D Y + QML+Q R + LK Sbjct: 187 LVKDGAKVVSDQGYTTATRDYTSFLEKIKNSGADTLATYMTNSEDEAQMLKQLRQLDLKV 246 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV--- 300 + +G + A +AG A +G D + A + A K S P V Sbjct: 247 KIIGSTSIATAVCIQLAGSAVDGTYGVSDFVADGNDAAKAFTKLYVA--KYHSQPDVFGG 304 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGD-LKGF 352 W+ Y A+ L+ + + G+ P A+ K ++A G + V G N+D GD L G+ Sbjct: 305 WV-YDAMNVLSRVIAKDGT-APAAIQKGIRAVKGYHGVEGTYNFDANGDGLHGY 356 >UniRef50_Q0AV49 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=4 Tax=Bacteria RepID=Q0AV49_SYNWW Length = 399 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 90/323 (27%), Positives = 148/323 (45%), Gaps = 11/323 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+ +GA +G +A +G G AI D+NA+GGI G K+ GV D+ + + +A Sbjct: 46 IKLGFLGATTGDVANYGIPGKKGMEMAIDDLNAQGGILGKKVEGVYEDNKGENSEIALIA 105 Query: 86 NK-IVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 K I D + ++G C+ T+ A+DI + +++ S GAT + + G ++ R LD Sbjct: 106 TKYITRDKVVAMVGDPCTGLTKVAADIAQKNKVVIFSAGATGTGVVEIG-DYVFRNTLLD 164 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEK 203 P+ +++ + ++ AII Y L Q+ +KA +V D I GE Sbjct: 165 QFAVPSVVDWMMNSKGWKKFAIITSLNNGYSTALTPVFQEAIKAKGGKIVNEDTINDGET 224 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 DF+A I +LK D + + GYY E + +A+ GL +G +G+ L + DA Sbjct: 225 DFTAQITKLKNTGADVLVFTGYYREAALLQNEAKKQGLDITLLGGDGLYGHDLIKLGKDA 284 Query: 264 AEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWIT--YAAVQSLATALERTGSDE 321 E ++ P+ + K +K P ++ Y A+ LA A+ S + Sbjct: 285 VEEKVIYYCGFSSDQPSPETDAFIKKYVEKYKEQPDMFSAQYYDAIMILAKAMTDAKSTD 344 Query: 322 P------LALVKDLKANGANTVI 338 P LA +KD NT Sbjct: 345 PSVFKDELAKLKDYPGVSGNTTF 367 >UniRef50_Q67LV0 Branched chain amino acid ABC transporter substrate-binding protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67LV0_SYMTH Length = 395 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 3/320 (0%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 +A T +G A S ++ + V+G ++G A++G + G A+++INA GG++ Sbjct: 28 SAATAPSGAQGSAGSQNGAQGEVLIGVMGPLTGDSAEYGKIWRRGFDLALEEINAAGGVQ 87 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G L V D DPKQ+ AVA K VND + VIG S ++ AS I++ G++ + Sbjct: 88 GRPLNYVFEDTQSDPKQSPAVAQKFVNDPRVVAVIGDFSSPASMAASPIFQRAGLVQLGI 147 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 ++P+ T+ G I + + + P A+ +E + +R+A++H +G+ A Sbjct: 148 TNSHPDFTKTG-DFIWSNSTSQTDEAPFLARLAVEQLGRKRLAVLHQNTDWGKTTADLFV 206 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 + +A A VV + EKDF ++ + + D + YY + + +Q +VGL Sbjct: 207 EQARALGAEVVLQEAYLLTEKDFRPVLTKARDAQPDALVLISYYNDGALIAQQIPAVGLD 266 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGML-VTMPKRYDQDPANQGIVDALKADKKDPSGPYVW 301 + V + N+ G A EG+ V+ D P Q V+ + + Sbjct: 267 VTVLAASSVYSPQFLNLGGAAVEGVYTVSRFHPADPRPEAQQFVERFRERYGTDPDTFAA 326 Query: 302 ITYAAVQSLATALERTGSDE 321 Y ++ LA L R G D Sbjct: 327 GAYDGMKILAAVLNRVGVDR 346 >UniRef50_Q73K61 High-affinity branched chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Treponema denticola RepID=Q73K61_TREDE Length = 385 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 154/331 (46%), Gaps = 11/331 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG--IKGDKLVGVEYDDACDPKQAVA 83 I A G ++G Q+GD E A+KDIN G + G K++ YDD D K+AV Sbjct: 38 IYFAWYGPLTGDAKQYGDTEKIAVELALKDINDAGNGVLGGRKIIVDFYDDKNDAKEAVN 97 Query: 84 VANKIVNDGIKY--VIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 +ANKIV + KY V+G S+ + A+ IYE I+ SP +++ + + G + + R Sbjct: 98 IANKIVAEK-KYLAVVGGFGSTPSMAAAPIYEKAKIINYSPTSSHADFSSLG-KFMFRNT 155 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 + A Y+ + + +AI++ +G +A+ + + Sbjct: 156 PTQQIETTQYADYVYTKLGIKSVAILNVNDDWGNNIAKIFTNEFVKLGGKITDLQTYIPN 215 Query: 202 E-KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 + DF+ +I++ K N + + YY + ++RQA+++ Q + L ++A Sbjct: 216 QTSDFTPMISKAKTTNPEAFFPVAYYQDSANIVRQAKNLDFNVQMILSSSTLKQELIDLA 275 Query: 261 GDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 GD EG + D P ++ +V TY V+ LATA++ GS Sbjct: 276 GDIVEGAFIMNAYSPDINTPEFIRVIGEYTKRTGKQGDAFVMQTYDVVKQLATAVDMAGS 335 Query: 320 DEPLALVKDLKAN--GANTVIGPLNWDEKGD 348 D+P+ +V++ AN G N + GP N +E GD Sbjct: 336 DDPV-VVRETLANMKGYNALSGPYNMNELGD 365 >UniRef50_D0D0C1 Extracellular ligand-binding receptor n=1 Tax=Citreicella sp. SE45 RepID=D0D0C1_9RHOB Length = 425 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 82/277 (29%), Positives = 134/277 (48%), Gaps = 9/277 (3%) Query: 2 KRNAKTIIAG-----MIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 +R A +IAG + AI ++K+ + +SGP A G G A+K+ Sbjct: 45 RRQALRLIAGATGATLATPAIIRAQTPSELKIGGMLPLSGPAAIEGHQVLKGLEFAVKEA 104 Query: 57 NAKGG-IKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDE 115 NA GG + + ++ VE D+A + +AV I D + +++G S+ I ++ Sbjct: 105 NAAGGALDREIVLMVEDDEANTTRGVIAVRKLIETDKVPFIVGTYASAVVIATMQITKEY 164 Query: 116 GILMISPGATNPELT---QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ 172 G+ ++S G+T+ T + G R+ QG A I + +AIIHD Sbjct: 165 GVPLLSGGSTSVAATDANEPGNPWFFRSWPSSVDQGLDTANAITGRFGAKTVAIIHDSGS 224 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 YG L V+ +K ++ D AGE+DF+ L+ R++ E D VY GG+ + + Sbjct: 225 YGYSLGDQVEQVVKDNGGEILSRDTYNAGEQDFTTLLTRIRSEKPDAVYIGGWAGDGAMI 284 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLV 269 +RQA VGL+TQF+G + + +AG A+EG V Sbjct: 285 VRQATEVGLRTQFVGSGSMVSDDFIELAGPASEGFAV 321 >UniRef50_Q127P6 Extracellular ligand-binding receptor n=5 Tax=Proteobacteria RepID=Q127P6_POLSJ Length = 392 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 97/361 (26%), Positives = 167/361 (46%), Gaps = 25/361 (6%) Query: 3 RNAKTIIAGM--------IALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIK 54 R TI+AG +AL S + +K+A VG ++G ++ G N A A++ Sbjct: 2 RRRNTILAGTALLTTCLSLALLASPVMAKEVVKIAFVGPLTGGVSNMGLGGRNSADLAVR 61 Query: 55 DINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYE 113 N K + V DD C P V VA K+ D I + H CS+ + +Y Sbjct: 62 LRNQDPKSKYTYEL-VAQDDECKPNVGVQVATKVAADKNIVAGVTHYCSAVAMATAGVYN 120 Query: 114 DEGILMISPGATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ 172 G+ + GA PE+T +Q + R G +Q A K+ + + ++ AIIHD Sbjct: 121 RFGMPAVVWGAVLPEVTYGNNFQEVHRVNGTMINQNEVAYKF-MAGLGYKKWAIIHDTTD 179 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 YG+G + + LK V+ G+TA ++DF+ + ++++ N D +Y+GG P ++ Sbjct: 180 YGKGHNKYFSEFLKKGGGTVLGTFGVTADQQDFTTELTKIRELNPDVIYFGGLTPLGVRI 239 Query: 233 LRQARSVGLKTQFMGPEGV-GNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDALKA 290 Q +G+K QF G G+ +A + + AEG L + +++ P + Sbjct: 240 RTQMEKLGIKAQFQGTSGIKSDAYIQGAGKELAEGTLSFIEGAPWEKLPGGLFFISKYAQ 299 Query: 291 DKKDPS----GPYVWITYAAVQSLATALERTGSDEPLALVKDL--KANGANTVIGPLNWD 344 K S GP+ +AA + A+E+ G D V+D+ + A+T++G + +D Sbjct: 300 QKYGESAEAYGPF---AFAAANLIMDAVEKVGPDRK--KVRDVLNRTKDADTIVGKVTFD 354 Query: 345 E 345 + Sbjct: 355 D 355 >UniRef50_B0TD42 Branched chain amino acid abc transporter, amino acid-binding protein n=2 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TD42_HELMI Length = 400 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 92/327 (28%), Positives = 160/327 (48%), Gaps = 23/327 (7%) Query: 34 MSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DG 92 +SG A +G NG + I D+N KGG+ G K+ V D+ + +A VA +++N + Sbjct: 52 LSGGNATYGTAAVNGIKLYIDDLNEKGGLLGKKVKFVSLDNKSEAGEASNVAARLINQEK 111 Query: 93 IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ----RGYQHIMRTAGLDSSQG 148 + ++G SSST + D+ I +IS A E+T + ++ R QG Sbjct: 112 VVAILGGAASSSTVGFVKLANDKKIPVISSSAVAQEVTVDETGKTRDYVFRACFTAPFQG 171 Query: 149 PTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSA 207 A+Y L+++K ++ AI+ D Q Y +G ++ +D VV +G G+KDF + Sbjct: 172 EVMAQYALDSLKLKKAAILVDNQSPYSKGSGKAFKDYFVKNGGQVVAEEGYVTGDKDFRS 231 Query: 208 LIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGM 267 ++ R+K + + +Y GYY E G +++QA + + +G +G + +L+ IAG AE + Sbjct: 232 VLTRIKGRDAELIYVPGYYEEAGFIVKQASELVMTLPILGGDGWDSPTLAKIAG--AENL 289 Query: 268 LVT-MPKRYDQDPAN---QGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP- 322 T Y ++ + Q + A KA + + Y A L A++R S +P Sbjct: 290 NNTFFSTHYSEEEKSARVQDFIAAYKAKYGENPEALGALGYDAAAILVDAIKRANSTDPE 349 Query: 323 -----LALVKDLKANGANTVIGPLNWD 344 L+ KDL+A V G +++D Sbjct: 350 KVREALSATKDLQA-----VTGTISFD 371 >UniRef50_D2B8C1 Extracellular ligand-binding receptor n=2 Tax=Streptosporangineae RepID=D2B8C1_STRRD Length = 400 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 11/287 (3%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S A + +K+ +G ++GP A NGA+ I + N K+ VEYD D Sbjct: 39 SSAAASGTVKIGFMGDLTGPNAGIVIPPRNGAKLVIDEYNKTN--PAVKVELVEYDSQGD 96 Query: 78 PKQAVAVANK-IVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 P +AVA+A + I D + +IG S + + E+ I I+ ATN +L + G++ Sbjct: 97 PSKAVALAQQAIKTDKVASMIGPAFSGESAQVGPVLEEAAIPSITASATNTKLAENGWKF 156 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 R DS QGP A +I + + +I DK +YG+ LA +V+ L + A V D Sbjct: 157 WHRILPNDSVQGPGIADFIAGAAAAKNVFVIDDKSEYGKPLADAVRTQLTSKGAKVT-DD 215 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK-TQFMGPEGVGNAS 255 + E DFS+++ ++ D +++GGYY G +L+Q R G+K +F +G + Sbjct: 216 SLDPAESDFSSVVNKVAAAKPDAIFFGGYYAAAGNLLKQLRDKGVKDAKFFSGDGSLDRG 275 Query: 256 LSNIAGDA-AEGMLVTMPKRYD----QDPANQGIVDALKAD-KKDPS 296 L + AG AEG LV P D +G DA KA DPS Sbjct: 276 LIDGAGAPNAEGALVGCPCYIATPDVTDAKVKGFADAYKAAFSADPS 322 >UniRef50_Q83MT4 Branched-chain amino acid ABC transporter substrate-binding protein n=2 Tax=Tropheryma whipplei RepID=Q83MT4_TROWT Length = 398 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 94/328 (28%), Positives = 147/328 (44%), Gaps = 16/328 (4%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 + +A VG ++GP A +G + A+K N G ++ G +D P +A V Sbjct: 64 LSIAYVGIVTGPNAAFGKSINEAFQLAVKQHNDNN--PGCQVTGKVFDTEGSPDKAPGVV 121 Query: 86 NKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 +++ D I V+G S Q I+E ++ I+P AT P L+ G++ R A D Sbjct: 122 AQVIGDSSIVAVLGPAFSGENQAVGGIFETARLVHITPSATLPTLSSHGWKTFFRAASTD 181 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 Q T +LE ++ ++ ++ D YG+ L V+ G+ A + DGI G +D Sbjct: 182 LEQ-STGVIALLEKLEAKKTFVVSDDSAYGKFLGDLVKKGVDLAGS-----DGIITGSRD 235 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 FS+++A++ D V++ GYYPE Q R G + P+G + +LS +AG AA Sbjct: 236 FSSVVAKVVSSGADSVFFAGYYPEAAAFFTQLRGAGFNGYLVVPDGSLDRNLSKLAGQAA 295 Query: 265 EGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE--RTGSDEP 322 G+ P D A G DA+K G Y Y L ++ RT Sbjct: 296 VGVYAVCPCTDDSQVAGFG--DAMKKAYGHYPGIYSSSAYDVTTILLRGIDSGRTSRSSL 353 Query: 323 LALVKDLKANGANTVIGPLNWDEKGDLK 350 L V+ A G V G + GDL+ Sbjct: 354 LDWVRGYDAYG---VSGHYKFKANGDLQ 378 >UniRef50_A9U581 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U581_PHYPA Length = 870 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 65/156 (41%), Positives = 93/156 (59%), Gaps = 3/156 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDKLV-GVEY-DDACDPKQAV 82 +++A G +SGPIA G E NG R A+ D+NAKG I G KL +E DD DP QAV Sbjct: 55 VRIAHAGPVSGPIASLGKDEENGVRMALDDLNAKGLEIGGRKLRWKLEAGDDGGDPGQAV 114 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 A+A ++ + + V+GHL S +T PA+ IY D GI+M++P A+NP +TQ GY R Sbjct: 115 ALARRLCDKKVAAVVGHLQSGTTLPATSIYHDCGIVMVTPAASNPAITQAGYDTTYRVIA 174 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 D + + + + +R AII D+ YG+G+A Sbjct: 175 DDRAMVDALVAHAVGKLGVKRAAIIDDRSAYGQGIA 210 >UniRef50_Q0ATW1 Branched chain amino acid ABC transporter (Substrate-binding protein) n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0ATW1_SYNWW Length = 392 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 90/342 (26%), Positives = 157/342 (45%), Gaps = 23/342 (6%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A + I V + +SG +A +G NG AI++IN GG+ G +L +E D P + Sbjct: 38 AAVETIPVGINVELSGDLASYGSNSRNGMVLAIEEINQAGGVLGKELKYIERDCQSKPDE 97 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNP-----ELTQRGYQ 135 A+ + + + I +G L S + ++ + I +I+P AT E T + Sbjct: 98 AMNNSAALAGEKIIAQLGPLTSGAVAGSTPVMMQNKIPLIAPAATAENVTVEEKTGKTLD 157 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAII-HDKQQYGEGLARSVQDGLKAANANVVF 194 +I R LD+ Q A++ L +K + I Y +GLA+ ++ A +V Sbjct: 158 YIFRVCYLDADQARRMAEFALNDLKVKNAVIFGSTSDDYAKGLAKYFEEAFVAGGGKIVA 217 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 +G G+KDF A + +L+ +N +F+Y GYY E+ +++QAR + +K G +G + Sbjct: 218 KEGYVNGDKDFKATLTKLRSKNPEFIYVPGYYTEVALLIKQARDLDIKVPIGGGDGWDSP 277 Query: 255 SLSNIAGDAAEGMLVTMPKRY----DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSL 310 + +AG AE + T + D P V A +A K + + Y + + L Sbjct: 278 DMVKVAG--AEALNNTYFANHYSVEDPSPVISSFVKAYEAKYKKLPDSFAALGYDSAKIL 335 Query: 311 ATALERTGS------DEPLALVKDLKANGANTVIGPLNWDEK 346 A A++ G + LA +KD + G ++ +EK Sbjct: 336 AQAIKDAGEADSAKVAQALAKIKDFPG-----ITGTMSINEK 372 >UniRef50_B3ENC9 Extracellular ligand-binding receptor n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ENC9_CHLPB Length = 377 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 146/301 (48%), Gaps = 28/301 (9%) Query: 3 RNAKTIIAGMIALAISHTA------------MADDIKVAVVGAMSGPIAQWGDMEFNGAR 50 +N K+I A ++ LA+ TA + I + V+ ++G +A +G+ GA Sbjct: 2 KNLKSIKASVVMLAMLITAGIFAAGCSPQQNKTEGITIGVLLPLTGELASYGEPMKKGAE 61 Query: 51 QAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPAS 109 A++ I+ + + K V D DPK AV+ K+V+ +G Y+IG + SS+T Sbjct: 62 IALEQISTENKGEEYKYNAVYIDSQADPKTAVSGMQKLVSLNGACYIIGDVSSSTTLAMV 121 Query: 110 DIYEDEGILMISPGATNPELTQRGYQHIM-RTAGLDSSQGPTAAKYILETVKPQRIAIIH 168 I E + ++SPGA++P+L RG R + +A++I +K ++A+++ Sbjct: 122 PIAEKNKVFLLSPGASSPKL--RGISPFFARNYPSSVEESIDSAEFIKNVLKKDKVAVVY 179 Query: 169 DKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPE 228 +YG GL Q V + E DF +IA+L++E + +Y G E Sbjct: 180 VTNEYGLGLVDMFQKKYTEIGGQVTMKEPYKFEESDFRTIIAKLRQEQPEVIYLAGNQKE 239 Query: 229 MGQMLRQ------ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQ 282 MG+ ++Q + ++ F+ P+ + N+AG AA+G++V +P +DP + Sbjct: 240 MGKFMKQYAESEISATIVSNISFLEPDCI------NVAGKAADGVIVPVPYFNPEDPLMK 293 Query: 283 G 283 G Sbjct: 294 G 294 >UniRef50_C8XBP2 Extracellular ligand-binding receptor n=2 Tax=Actinomycetales RepID=C8XBP2_NAKMY Length = 425 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 20/261 (7%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGV---EYDDACD 77 A +A+ GA++GP A G GA AI++ N K + V ++D D Sbjct: 92 ATCPATSIAMAGALTGPNAALGLNILYGANVAIEEHN-----KANPNCTVTIKQFDTEGD 146 Query: 78 PKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 P++A VA +IV D + ++G S T+ I+ +L ++ AT LT G+ + Sbjct: 147 PQKATQVAPQIVGDTSVIGLLGPAFSGETEATGPIFNQANLLSLTASATRVSLTTNGWTN 206 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 R D QGP+ KY++ T+ +++ +I D YG GLA V L +A D Sbjct: 207 FFRGLANDGVQGPSVGKYLVNTLGYKKVCVIDDSSSYGAGLAAEVTPALGSA------VD 260 Query: 197 G-----ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV 251 G + G+KDFSA + +K D V+Y GYY E ++Q R G+ F+ +G Sbjct: 261 GGCTGQVKVGDKDFSATVQLVKGAAPDAVFYAGYYAEAAPFVQQLRDAGVTATFVSADGT 320 Query: 252 GNASLSNIAGDAAEGMLVTMP 272 + + G A + +++ P Sbjct: 321 NDPQFVSQGGQATKDAVLSCP 341 >UniRef50_Q03M75 ABC-type branched-chain amino acid transport system, periplasmic component n=55 Tax=Lactobacillales RepID=Q03M75_STRTD Length = 391 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 122/247 (49%), Gaps = 8/247 (3%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 T + D IK+ V ++G +A +G E NG + A+ +IN GG+ G K+ V D+ + Sbjct: 34 TKIGDTIKIGVNMELTGAVAAYGKSEQNGIKLAVDEINKAGGVDGKKIELVTKDNKSENA 93 Query: 80 QA-VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG---YQ 135 +A + N + + ++G S + AS + + G+ +I+P T +LT + Sbjct: 94 EASTSSTNLAIQSNVNAIVGPSTSGAVAAASLVSQKTGVPLITPSGTQDDLTVDANGVKK 153 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVF 194 + RT DS QG A Y + +++ + +D Y +G+A + K +V Sbjct: 154 FVFRTTFKDSYQGEVLAAYSYNNLNAKKVVLYYDNASDYAKGIADEFKRKYKG---QIVT 210 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 T+G+KD+ + + + K ++ D V GYY E G + +QAR +G+ +GP+G + Sbjct: 211 EATFTSGDKDYQSALTKFKDQDYDAVVMPGYYTETGIITKQARDLGIDKPILGPDGFSDE 270 Query: 255 SLSNIAG 261 + +AG Sbjct: 271 KFTELAG 277 >UniRef50_B8J3K0 Extracellular ligand-binding receptor n=10 Tax=Deltaproteobacteria RepID=B8J3K0_DESDA Length = 405 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 93/363 (25%), Positives = 170/363 (46%), Gaps = 23/363 (6%) Query: 6 KTIIAGMIALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 K + A ++L + A+A + IK+ ++G I + G+ A ++INAKGG+K Sbjct: 21 KLVTACALSLFVGQAALAAEKPIKIGFPIPLTGEIPKVGEGSKFAAEMLKEEINAKGGLK 80 Query: 64 -GDKLVGVEY---DDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GDK +E+ D+ P+ AV V K++ D + ++G S PA + DE + Sbjct: 81 VGDKYYPLEFIYEDNESKPESAVNVTLKLIARDKVHAIVGPQSSRQAVPAGGVANDEEVP 140 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGL 177 +I+P +TNP+ T G + R A LD Q P A + + ++ A++ + Y +GL Sbjct: 141 LITPWSTNPDATN-GRPWVFRGAFLDPFQAPVAVDFATKQFNAKKAAVLFEVSNDYSKGL 199 Query: 178 ARSVQDGLKAANA--NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 A + ++ + + +VV + ++DFSA + ++ DF++ Y ++ Q Sbjct: 200 ADNFKEAFEKTHGKGSVVAMESHGPKDQDFSAQLTKIIAAKPDFIFVPENYSFAALIVPQ 259 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPA---NQGIVDALKADK 292 AR +G K FMG + G+A L N+ G G + Y + A + +D KA Sbjct: 260 ARDLGYKGPFMGSDAWGSAELFNLCGKDCVGQYFST--HYTAEGATGKTREFIDKYKAKY 317 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEP-----LALVKDLKANGANT--VIGPLNWDE 345 +T+ ++ + A++ G +P +++D A N + G + +D+ Sbjct: 318 GYVPDDVAALTWDSINIVLQAIQNAGKVDPDLKKQRKIIRDNMAAIENFDGITGSMKFDD 377 Query: 346 KGD 348 GD Sbjct: 378 NGD 380 >UniRef50_D1B6L8 Extracellular ligand-binding receptor n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6L8_THEAS Length = 386 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 127/261 (48%), Gaps = 6/261 (2%) Query: 12 MIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVE 71 ++ +S A++IK+ +++G + WG E +K INA+GG+ G K+ + Sbjct: 13 LVMALVSGAPAAEEIKIGHSVSLTGGASMWGQSEKLALDLLVKRINAQGGVLGRKIRLIS 72 Query: 72 YDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL-- 129 YD+ DP ++V VA ++++D + +IG S + + + E I M+ ATNP + Sbjct: 73 YDNRNDPVESVNVARRLIDDRVVAIIGPAQSGNAIATAPVVERARIPMVVTTATNPYVTI 132 Query: 130 ---TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGL 185 T + + R +D QG AA++ +K + AI++D YG+ LAR ++ Sbjct: 133 DKRTGKTRAFVFRPCFIDPFQGTVAARFAYRDLKARTAAILYDVGSDYGQWLARYFEEAF 192 Query: 186 KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQF 245 VV + E D+ A + +++ D ++ E +QAR +G+++ Sbjct: 193 AKEGGKVVAKEAFRTDELDYRAQMGKIRSVKPDVIFIPTSQKEAAMAAKQARDMGIRSTL 252 Query: 246 MGPEGVGNASLSNIAGDAAEG 266 +G + G+ + ++ G+A G Sbjct: 253 LGTDNWGSPDIIDLGGNAVHG 273 >UniRef50_C4FV28 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FV28_9FIRM Length = 384 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 164/361 (45%), Gaps = 20/361 (5%) Query: 1 MKRNAKTIIAGMI-ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 K+ + AG++ A ++ + D +KV +SG A +G G + A+K N + Sbjct: 3 FKKLGTALFAGLLLASPLATVSAQDTVKVGGNFELSGAAAAYGTPMAYGLKLAVKQYNEE 62 Query: 60 -GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G K+ D+ D +A A A K+V G+ ++G + + D Sbjct: 63 NGGVNGKKVEAQVEDNKSDKTEAAAAATKLVAAGVAGIVGPATTGDALAEIPVANDGKTP 122 Query: 119 MISPGATNPELTQ----RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQY 173 I P AT +T + Y +I R DS QG AA Y+ +T +++ ++ D+ Y Sbjct: 123 AIFPAATGNGITLDSAGKVYDYIYRVCFEDSFQGVAAANYLADTQGYKKVVLLVDQANDY 182 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 +GLA S +A +V + + DF ++ + ++ D +Y GYY E G ++ Sbjct: 183 SQGLADSFTKQFEAKGGTIVAKESYQTNDTDFLTVLTNISTQDFDALYVPGYYTEAGLII 242 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ--DPANQGIVDALKAD 291 +QAR +G+ +G +G N +L +AG + D+ DPA + V+A + + Sbjct: 243 KQARELGIDKPIVGGDGFANDTLVELAGKDNLNNVFYTSHYSDKSDDPAVKKFVEAYEKE 302 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEP------LALVKDLKANGANTVIGPLNWDE 345 + ++Y A L A++ GS +P LA +KD K V G ++DE Sbjct: 303 YGKKPDTFAALSYDATNVLLQAIKDAGSTDPQEVNKALAKIKDFKG-----VTGTFSFDE 357 Query: 346 K 346 K Sbjct: 358 K 358 >UniRef50_A4XM95 Extracellular ligand-binding receptor n=4 Tax=Clostridia RepID=A4XM95_CALS8 Length = 393 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 82/347 (23%), Positives = 160/347 (46%), Gaps = 11/347 (3%) Query: 15 LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDD 74 + + + +++ V +SG +AQ+G G + A+++IN KGG+ G K+ V +D+ Sbjct: 26 FTFAFASSSKTVRLGVNLELSGAVAQYGQRTLEGLKMAVEEINKKGGVLGKKIELVVFDN 85 Query: 75 ACDPKQAVAVANKI-VNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNP-----E 128 D +A+ +A ++ + + ++ + S +T+ AS + ++S AT+ E Sbjct: 86 KSDKTEALNIATRLATKENVLALLSPVTSGATKSASIAATRYRVPLVSATATDDSVTIDE 145 Query: 129 LTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKA 187 T + ++ R DS QG A + L+T+K + AI+++ Y +GL ++ ++ Sbjct: 146 RTGKTKAYVFRICFNDSFQGSVMANFALKTLKVKTAAILYNAASDYSKGLYKNFKETFTK 205 Query: 188 ANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG 247 VV + GE+DF+ ++ +++ + D ++ YY + G +++QAR +G+ +G Sbjct: 206 GGGKVVAEEAFQQGEQDFNGILTKIRDKKPDVIFTPVYYDDAGLIIKQARELGMWMPILG 265 Query: 248 PEGVGNASLSNIAGD--AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYA 305 +G + + AG A T D D Q V K K + Y Sbjct: 266 TDGFDDPKVVEKAGKKYATNIFFSTHYSSQDTDKRVQDFVKRYKQKYKIEPNALSALGYD 325 Query: 306 AVQSLATALERTGSDEPLALVKDLKANGANTV--IGPLNWDEKGDLK 350 +A A++R GS ++ N N V G ++ D K + K Sbjct: 326 LGYFMADAIKRAGSTTDREKLRRALENTKNFVGLTGIISIDSKHNAK 372 >UniRef50_B1C374 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B1C374_9FIRM Length = 421 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 98/369 (26%), Positives = 166/369 (44%), Gaps = 28/369 (7%) Query: 1 MKRNA---KTIIAGMIALAI---------SHTAMADDIKVAVVGAMSGPIAQWGDMEFNG 48 MKRN K +IA + +I S T + K+ +G +SG +Q+G N Sbjct: 36 MKRNLSKFKKVIATLSVASILVACGGGGGSATTDISEAKLGFIGPLSGDASQYGIAVKNA 95 Query: 49 ARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQP 107 AI + N + + V DD D + V NK+V + G+ +IG + S S Sbjct: 96 IELAINEYNDENDTN---ITAVYLDDKADATEGVNAYNKLVTEEGVNAIIGSVTSGSALA 152 Query: 108 ASDIYEDEGILMISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR 163 E +GI +++P + ++T Y+++ R DS G AK ++ Sbjct: 153 VVATAEADGIPILTPSGSADQITINDEGETYENVFRICTNDSYAGTFLAKKCNTDFNYKK 212 Query: 164 IAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYY 222 +AI+ +K Y GL + + K N VVF + T KD+S I++LK E D ++ Sbjct: 213 VAILSNKDSDYSTGLRDAFVEEAKNQNVEVVFDETYTKDTKDYSTYISKLKNEEYDTIFL 272 Query: 223 GGYYPEMGQMLRQARSVGLKTQFMGPEGV-GNASLSNIAGDAAEGMLVTMPKRYDQDPAN 281 YY ++ +++Q R G+ T +G +G G +S + G+ G T +D++ ++ Sbjct: 273 PDYYEQVVTIVQQFRDAGINTPLLGADGWDGVLGVSGVDGNIFNGSYYT--SGFDKNSSD 330 Query: 282 QGIVDALK--ADK-KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTV 337 + + +K DK K + Y AV + A+ER G+ E + + L N N V Sbjct: 331 ENVQRFVKNYTDKYKTEPNMFAAFAYDAVFVMMDAMERAGTTESSKVNEALADTNYKNGV 390 Query: 338 IGPLNWDEK 346 G +D+K Sbjct: 391 AGAFKYDKK 399 >UniRef50_C6WB66 Extracellular ligand-binding receptor n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WB66_ACTMD Length = 392 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 114/232 (49%), Gaps = 4/232 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ +G ++G + NGA+ A + NAK K+ VEYD P+QA ++ Sbjct: 40 VKIGFMGDLTGENSAIVIPPRNGAKLAFDEYNAKN--PKVKIELVEYDSQGKPEQATSLI 97 Query: 86 NKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 K V +D I +IG S ++ + + I ISP ATNP L G+ R D Sbjct: 98 TKAVGSDKISALIGPAFSGESKAIGGVLDQNKIPSISPSATNPGLAANGWSFWHRVVAND 157 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QGP A ++++ P++ ++ D Q+Y GLA +V + A V D + D Sbjct: 158 DDQGPGIADFLVKAKSPKKAFVLSDDQEYSTGLADAVAKAFEGAGV-AVEKDRFSKDASD 216 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 +S+++ ++ N D + YGGYY + G++L+Q R + F +G +A L Sbjct: 217 YSSVVTKVASANPDVIVYGGYYAQAGRLLKQLRDSNVTAPFASGDGSLDAQL 268 >UniRef50_A8SAA0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAA0_9FIRM Length = 403 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 6/231 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IKV V+G ++G + +G NGA +K +NA GG+ G +L + D+ D QAV Sbjct: 49 IKVGVMGPLTGDASVYGQAVVNGANLYMKQVNADGGVNGKQLEIIAMDEQGDETQAVTCF 108 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ-----HIMRT 140 K+V+ GI ++G + ++ T + D + M++ AT +T ++ R Sbjct: 109 TKMVDQGITALVGDVTTAPTLAVAAESADYNMPMVTASATAEAVTYDAETDTVNGNVFRA 168 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFDGIT 199 D QG A Y E + + A+I K + Y EGLA + +A VV + + Sbjct: 169 CFTDPFQGVKMADYAYEKLGYTKAAVIFLKGKDYNEGLAENFAKEFEAKGGTVVDQESYS 228 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 G+ DF + + +N + V+ YY E+GQ+L QA S+GL F+G +G Sbjct: 229 EGDVDFKTQLTSILGKNPEMVFCPNYYQEVGQILAQAESIGLTVPFLGGDG 279 >UniRef50_B8IZP5 Extracellular ligand-binding receptor n=9 Tax=Bacteria RepID=B8IZP5_DESDA Length = 381 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 150/331 (45%), Gaps = 12/331 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+ V ++G A G +E G R A K++ G D +V D+ D +A Sbjct: 31 IKIGVYLPLTGQNAFGGQLELEGVRLAHKEMPTVLGRPVDLVV---VDNKSDKVEAANAV 87 Query: 86 NKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 ++V D + +IG SS +++ E + I TNP +TQ G ++ R +D Sbjct: 88 KRLVERDKVVALIGSYGSSLAMSGAEVAEKAKVPGIGTSCTNPLVTQ-GKKYYFRACFID 146 Query: 145 SSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 QG AA Y E + ++ A++ D Y GLA K VV ++G++ Sbjct: 147 PYQGAAAATYARENLGFKKAAVLMDMTNDYAVGLASFFSRSFKKQGGEVVGTLKYSSGDQ 206 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 DF+A + L + D V+ Y+ E +++QAR +G K + MG + + N + G A Sbjct: 207 DFTAQLTELISKQPDIVFMPAYFAEGAIIMKQARELGAKFRLMGADAMDNPDTLKLGGKA 266 Query: 264 AEGMLVTM----PKRYDQDPANQGIVDALKADKKD-PSGPYVWITYAAVQSLATALERTG 318 AEG L T P + A Q DA KA D + + Y + + A++R Sbjct: 267 AEGFLHTTFPYDPAMTNMSEAAQRFTDAWKATYPDKETNVNGALGYNSYFIIIDAIKRAN 326 Query: 319 SDEPLALVKDL-KANGANTVIGPLNWDEKGD 348 S EP A+ K L + +T +G L+ +E D Sbjct: 327 SAEPQAIAKALGETKDLSTALGVLSINESHD 357 >UniRef50_C4XNN1 Putative ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNN1_DESMR Length = 391 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 14/319 (4%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 + +AV+ A SG + G A IN++GG G L D+ + A Sbjct: 34 VHLAVIAATSGMASVHNQASLRGLYLAAAKINSRGGCLGSPLELTVLDNQSTSLGSRRAA 93 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 + V G+ V+G + SS + A+ + + GI MI+P +TN +TQ G HI RT D Sbjct: 94 QEAVRLGVAAVLGPIWSSHSLAAAPVLQAAGIPMITPLSTNTRVTQVG-DHIFRTCFTDD 152 Query: 146 SQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QG A++ E + A++ + Y +GLA+ + AA VV+ A D Sbjct: 153 FQGRVMARFARERLNAATCAVLASADEDYSQGLAKVFAEEFMAAGGKVVYTADYRAKSLD 212 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 F+ +A++++ + + ++ GY ++G ++RQARS+G+ T F+G + + +I G Sbjct: 213 FTPQLAQVQRLDPNVIFVPGYGLDVGLIIRQARSLGINTVFLGGDAWSDLYDHDIQG--L 270 Query: 265 EGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVW------ITYAAVQSLATALERTG 318 EG + D + +++ D + SG ++ + Y A+ + A+ER G Sbjct: 271 EGNYYSTFWHPDLPVSGNA---SVRQDFLEASGSHLRDSMDTAMAYDALLLVVEAIERAG 327 Query: 319 SDEPLALVKDLKANGANTV 337 S +P AL++ A+ ++ V Sbjct: 328 STQP-ALIRQALADTSSFV 345 >UniRef50_A0LKN6 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKN6_SYNFM Length = 376 Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 95/343 (27%), Positives = 159/343 (46%), Gaps = 23/343 (6%) Query: 1 MKRNAKTIIAGMIALAISHTAM----ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M+R + MI LAI +A A+ I V + ++SG A A++++ Sbjct: 1 MRRFGSLCV--MILLAIVLSACPGLAAESITVGAIFSLSGIAATHNGPLIPMLELAVEEV 58 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 N GG++G + V D+ P +V A + V G+ VIG SS + + + + G Sbjct: 59 NEGGGLQGRPVKLVFLDNQSTPIGSVKAAEEAVRLGMTAVIGAHWSSHSLAMAPVLQKAG 118 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGE 175 I MISPG+T+P +T+ G +I R +DS QG A++ + + +R+A+ + + Y Sbjct: 119 IPMISPGSTHPMVTRVG-DYIFRICFVDSFQGRAMARFAFKELGARRVAVAKNIDEDYSA 177 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 LA + + V DFS ++ ++++ D VY GY + G ++RQ Sbjct: 178 MLADCFSESFQLYGGKVACEVQYRGKAVDFSDIMEQIRRARPDVVYVPGYTRDSGLLIRQ 237 Query: 236 ARSVGLKTQFMGPEGVGNA--SLSNIAGDAAEGMLVTMP-----KRYDQDPANQGIVDAL 288 S+G++ F+G G+A +S AGDA EG + P R + + Sbjct: 238 GVSMGIRATFLG----GDAWDEISIYAGDAVEGSYQSAPWHPSVPRAESLRLKELYFRKY 293 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKA 331 A+ K S P + Y AV L A+ R G+ + A ++D A Sbjct: 294 GAEIKSFSAP---LAYDAVMLLVDAIRRAGTSD-RARIRDCLA 332 >UniRef50_A1A0J1 Solute binding protein of ABC transporter for branched-chain amino acids n=12 Tax=Bifidobacterium RepID=A1A0J1_BIFAA Length = 433 Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 98/338 (28%), Positives = 165/338 (48%), Gaps = 17/338 (5%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D I + V SG A +G+ E G + A+ +INAKGGI G K+ DD D +A Sbjct: 79 DTITLGSVTTNSGTAAAYGEAEVAGFKLAVDEINAKGGINGKKVKLESMDDKGDATEASN 138 Query: 84 VANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 NK+ D + V+G SS+T + + + + I+P AT+ + GY + RT Sbjct: 139 AFNKLAGDNSVLGVVGPTISSTTAAVAPLADQSKLPAIAPAATSDSIETGGY--MFRTCF 196 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFD-GITA 200 DS QG AAK+ ET+K +++A+++ Y G+ ++ K A +VV + +A Sbjct: 197 KDSYQGEIAAKFAAETLKVKKVAVLYGTGDPYSSGVGKAFAAAAKKAGLDVVAEENSSSA 256 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMG-QMLRQARSVGLKTQFMGPEGVGNASLSNI 259 + ++S+ + +++ +F+Y YY G ++ QARSVG K MGP+G +++ Sbjct: 257 DDTEYSSQLQKIQAAGAEFLYAPYYYSVAGPYIIPQARSVGYKGYVMGPDGYDGLKMTD- 315 Query: 260 AGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKK-----DPSGPYVWITYAAVQSLATA 313 D + V Y D +N + D +K+ KK DP+ + + Y +V + A Sbjct: 316 --DKSLYNKVLYTTHYSPDDTSNAKVQDFIKSYKKANKNADPN-TFTALGYDSVYMMKQA 372 Query: 314 LERTGSDEPLALVKDLKANGA-NTVIGPLNWDEKGDLK 350 +E+ G + V++ A + V G D+KG K Sbjct: 373 IEKAGKNATREGVRNAIAGMSFEGVTGNFTLDKKGSPK 410 >UniRef50_Q89G66 ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89G66_BRAJA Length = 436 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 82/310 (26%), Positives = 148/310 (47%), Gaps = 22/310 (7%) Query: 3 RNAKTIIAGMIA------LAISHTAMADDIKVAVVGAMSGPIAQWG-DMEFNGARQAIKD 55 R A ++ G++ LA+S A IK+ VV ++GP+A G ++ + GA+ I D Sbjct: 4 RMAARLVRGLLVAIAATGLAVSAQAQEKKIKIGVVYDLTGPLAGGGSELNYVGAK-IILD 62 Query: 56 INAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQP-ASDIYE 113 A+ G++G K+ V D P A+ + +++ + + V+G S+ P A+ + + Sbjct: 63 HFARTGVEGYKIEAVYADAQSKPDVAINESVRLLEQEKVDMVLGFFSSAQCVPVAARVEQ 122 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQ--------RIA 165 + + ++ ++ ++GY+++ R G +I + K + R+A Sbjct: 123 LKKFMWMTTCISSAVFNEKGYKYVFRPQASGDQFGMMTMDFIAQNAKAKFDKEPKDLRVA 182 Query: 166 IIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGY 225 IIH+ YG ++R + G K A NVV +G +A D SAL+ +LK+ D +++ GY Sbjct: 183 IIHEDGAYGVDVSRGNEAGAKKAGFNVVMKEGYSATAPDLSALVTKLKRAKPDVIFHTGY 242 Query: 226 YPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIV 285 P++ +LRQAR GLK + G G + EGM ++ DP + + Sbjct: 243 NPDITLLLRQAREQGLKFGALMGHGAGYGVYEKL----KEGMGADATYIFNTDPISIWLA 298 Query: 286 DALKADKKDP 295 + D K P Sbjct: 299 NQKTMDPKLP 308 >UniRef50_A8IHA6 ABC-type branched-chain amino acid transport systems n=2 Tax=Proteobacteria RepID=A8IHA6_AZOC5 Length = 390 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 6/329 (1%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + +K+ +G +SG AQ G NG + A+ NA G K+ V DDA +P+ V+ Sbjct: 47 ETVKLGFIGPLSGGNAQQGLAARNGFQLAVDQANAAG--LPFKIEPVILDDAANPQTGVS 104 Query: 84 VANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 A K+ ND + GH S ++ G+ + GA +P++T++ + R Sbjct: 105 AALKLTNDPKVVAATGHWNSGVALATIPVFSRAGVPFVIWGAISPKITEKNNPMVSRVVT 164 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 + AK+ + +RIAI+ D YG + + +A ++ + G Sbjct: 165 TLVNTNAPLAKWAAANIG-KRIAIVSDTSDYGAANLDNFKKFFEADGGTIIAAESAPVGT 223 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DF AL+ ++K N D +Y+GG E G + +Q +G+ +G +G + IAG Sbjct: 224 TDFRALLTKIKAANPDAIYFGGVVAEAGLVRQQMAQLGMTQPMIGVDGFYDQEFIKIAGP 283 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALK-ADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 AA G +V + K +P + +A K A+ +P G Y Y A + AL+ G+ + Sbjct: 284 AATGTIVGIAKEVG-NPKLDAMTEAYKGANFAEPVGSYTKNAYDATNIIIEALKTAGTKD 342 Query: 322 PLALVKDLKANGANTVIGPLNWDEKGDLK 350 A+ K ++A + +G ++DE G K Sbjct: 343 KAAIAKAIRAIDYDGAMGRTSFDENGQTK 371 >UniRef50_C7H459 High affinity branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H459_9FIRM Length = 407 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 6/233 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ V+G ++G ++ +G NGA +K +NA GGI G ++ + D+ D QAV Sbjct: 51 DTIKIGVMGPLTGNVSVYGQAVVNGASLYLKQVNADGGINGKQIEILTEDEQGDATQAVN 110 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY-----QHIM 138 K+V++GI ++G + ++ T + D + M++ AT +T +++ Sbjct: 111 CFTKMVDEGITALVGDVTTTPTLAVAAESADYNMPMVTASATAEAVTYDAETDTVNENVF 170 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFDG 197 R D QG A Y + + + A+I K Y EGLA + + ++ +V + Sbjct: 171 RATFTDPFQGIKMADYAYQKLGYTKAAVIFKKGADYNEGLAENFVNEFESLGGTIVDQES 230 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 + G+ DF + + + + V+ YY E+GQ+L QA SVGL F+G +G Sbjct: 231 YSEGDVDFKTQLTSILGKGPETVFCPNYYEEVGQILSQAESVGLNVPFLGGDG 283 >UniRef50_Q2JNB6 Hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein n=3 Tax=Bacteria RepID=Q2JNB6_SYNJB Length = 417 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 100/347 (28%), Positives = 163/347 (46%), Gaps = 10/347 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ + +++G + +G+ G + AI INA GGI G VE DD + A+ A Sbjct: 40 VKIGALMSLTGDLQAFGENCLKGIKLAIDQINAAGGILGSPAQVVEADDQTSAQPAIDAA 99 Query: 86 NKIVN-DGIKYVIGHLCSSSTQP-ASDIYEDEGILMISPGATNPELTQ-RGYQHIMRTAG 142 ++V + + +IG L S T P A+ + I ISP +T P +T + RT Sbjct: 100 QRLVTVEKVAGIIGALGSGITIPVATTVSVPNRIPQISPASTAPTITTLEDNDFLFRTVP 159 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D+ QG A+ E K +R+AII+ YG+GLA S + + + G+ Sbjct: 160 SDAYQGVALAQITREE-KLERLAIIYINNDYGQGLADSFKTAFEKRGGTITKSVPYEPGK 218 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMG-QMLRQARSVGLKTQFMGPEGVGNASL-SNIA 260 + + + +LK+ + + G YPE G +LRQA GL +F+ +G+ + + + + Sbjct: 219 ASYRSELTQLKEGDPQALVLIG-YPENGVVILRQALEEGLFDRFVFTDGMRSPDVAAQVG 277 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALKADKKD-PSGPYVWITYAAVQSLATALERTGS 319 + EG + P+ A Q +A KA + P PY+ Y A LA A+++ GS Sbjct: 278 AEKLEGSIGVSPQALTDSKAYQIFAEAYKAAYGELPPTPYIDTAYDAAFVLALAIQKAGS 337 Query: 320 DEPLALVKDLK--ANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGS 364 + A+ L+ AN T I P W + +L G +F A GS Sbjct: 338 TDGTAVRDALREVANPPGTEILPGEWAKAVELIGKGEDIFYTGASGS 384 >UniRef50_A6TPW6 Extracellular ligand-binding receptor n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TPW6_ALKMQ Length = 402 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 83/330 (25%), Positives = 148/330 (44%), Gaps = 7/330 (2%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 T ++ IK+ +G+++G A WG EFN + +++ N KGG G + + YD D Sbjct: 42 ETDTSEVIKIGWMGSLTGDQAVWGTCEFNTVKMMVEEANRKGGWLGQTIEVIGYDTRGDA 101 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 +AV ++ + D + VIG S S + E+ + I+ ATNP++T ++ Sbjct: 102 MEAVNAVRRLTSQDKVVAVIGPNASGQAIAISSVLEEMKVADIATVATNPKVTIDESGNV 161 Query: 138 ----MRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANV 192 R +D QG AA Y L+ + + AI++D Y +GL + + Sbjct: 162 KPYNFRVCFIDPYQGAVAAGYALDVLGLTKAAILYDVADDYSQGLTEFFEKHFVENGGTI 221 Query: 193 VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVG 252 V +G G+ DF ++++K+ + V+ ++ E+ QAR +G+ +G +G Sbjct: 222 VAKEGFKFGDVDFRPQLSKIKQAEPEVVFMPYFFKEVALSANQARELGIDAVLLGGDGWP 281 Query: 253 NASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 + L +A +A EG +D DP Q A A P ++ Y A L + Sbjct: 282 SDVLLEMAAEAVEGSYFVNHLDFD-DPDVQDFKAAYTAKYNLPVELNGYLAYDAFTVLES 340 Query: 313 ALERTGSDEPLALVKDLKANGANTVIGPLN 342 A+E+ G + A+ L+ + G + Sbjct: 341 AVEKAGVADSEAIRDALETVSVKGITGQIT 370 >UniRef50_D2MYC8 High affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=1 Tax=Campylobacter jejuni subsp. jejuni 414 RepID=D2MYC8_CAMJE Length = 748 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 9/250 (3%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI--KGDKLVGVEYDDACDPKQAV 82 +IK+ VV +SG A +G A + IK N+ GDK+ D D +++ Sbjct: 398 EIKIGVVLPLSGATAAYG----QSALEGIKLANSMQSTLSNGDKVSLAIIDTKGDKLESL 453 Query: 83 AVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 + AN++V+ D + +IG + +++T + ED I +I+P AT L + + R Sbjct: 454 SGANRLVSQDKVIGLIGEMVTANTLQVMRVAEDNKIPLIAPAATGDRLLDKKI-YSSRVC 512 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDGITA 200 +DS QG + AKY+ + + I+ D+ Y GLA++ + K+ ++ + + Sbjct: 513 FMDSFQGSSLAKYVFSKLNYKTAVIVVDQSADYSLGLAKAFEKQYKSNGGQILRILRVNS 572 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G+KDF A++A++K N +F++ YY E RQA+ GL +GV + + ++A Sbjct: 573 GDKDFRAIVAQVKSLNPEFIFLPLYYSEASLFARQAKLAGLNIPMGSADGVADQTFISLA 632 Query: 261 GDAAEGMLVT 270 DA+EG + T Sbjct: 633 ADASEGYIFT 642 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 131/262 (50%), Gaps = 6/262 (2%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A DI + VV ++G +A +G F+G A K + K + GD + V D D + Sbjct: 19 AKDINIGVVLPLTGTVAAYGQDVFSGIELANK-LQPKL-LNGDTIKLVTIDTKGDKLETS 76 Query: 83 AVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 N+++ D + +IG + +T A I E++ I +I+P A+ +L + ++ R Sbjct: 77 NGVNRLITTDKVLGIIGEATTPNTIQAISIAEEKKIPLIAPVASGDKLLDKK-KYASRVC 135 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITA 200 DS QG A Y+ + + II D+ Y GLAR+ ++ K ++ + + Sbjct: 136 FKDSFQGDKFATYVSRDLGLKNAVIIIDQSNVYSLGLARAFENSFKNNGGKIIKKLVVNS 195 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G+KDF A++++ K N DFVY Y+PE + RQAR VG + +GV N + ++ Sbjct: 196 GDKDFRAVVSQFKSLNPDFVYMPIYHPEAALIARQARQVGFDKLLVAGDGVNNQAFIDLG 255 Query: 261 GDAAEGMLVTMPKRYDQDPANQ 282 G A G++ T Y+ +P+ Q Sbjct: 256 GSAVNGVIFTDSFDYN-NPSTQ 276 >UniRef50_C2CF86 Branched chain amino acid ABC superfamily ATP binding cassette transporter binding protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2CF86_9FIRM Length = 389 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 154/334 (46%), Gaps = 25/334 (7%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+ G ++GP++ +G NG + AI +IN GGI G ++ DD + +AV Sbjct: 38 IKLGNSGPLTGPLSVYGKTCQNGIQLAIDEINKNGGIDGKQVEWTGLDDKGEITEAVTNY 97 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 NK++ D + ++G + S T ++ + I+ I+P T +T+ G ++ R D Sbjct: 98 NKLMEDKVNAILGGIPSKPTLAMAESAAKDEIVYITPTGTQANITE-GKDNVFRVCFTDP 156 Query: 146 SQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QG A + + +K +++AI+ ++ Y G+A ++ K A VV + + D Sbjct: 157 FQGEVLANFAADKLKAKKLAILRNQSSDYSMGVADVFKETAKKAGMEVVADESYGDNDTD 216 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG-------VGNASLS 257 F A + ++K EN+D + YY ++ + Q R G+K +G +G + +S Sbjct: 217 FKAQLTKIKSENVDVLLIPDYYEKVALISSQVRDSGIKATLLGADGWDGVLSVMDQSSFK 276 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQG---IVDALKADKKDPSGPYVWITYAAVQSLATAL 314 ++ G DP+ + I D + K+DP+ + Y V A+ Sbjct: 277 DVEGSYFSNQFSL------DDPSEKCQKFIKDYKEKYKEDPT-TFAAEGYDTVYLYKQAV 329 Query: 315 ER---TGSDEPLALVKDLKANGANTVIGPLNWDE 345 E T DE + +K++K +G + G +DE Sbjct: 330 EEAKTTKWDEVVKALKNIKFDG---ITGSFKFDE 360 >UniRef50_Q0YRE9 Extracellular ligand-binding receptor n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YRE9_9CHLB Length = 383 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 146/331 (44%), Gaps = 18/331 (5%) Query: 30 VVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV 89 V+ + P + D +G A+ +IN + + VE DD D K+ +A + Sbjct: 43 VIIGVCWPFSVNRDGMADGLHLALDEINTRRLAGPYTIRLVERDDEFDSKKHKNIAREFA 102 Query: 90 NDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQG 148 + + V+G+ + AS IYE +L + GA N ++T G+ +I RT L S + Sbjct: 103 DRADMSAVLGYYDDGPSIRASSIYESSRLLHLMIGANNTDMTSHGFNYINRTI-LSSDRI 161 Query: 149 PTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSAL 208 + + ++I ++ ++ YGE LA Q GL NA VV+ + DF L Sbjct: 162 ALKLAKLTTDLGYRKIVVLWEEDAYGEDLAYQYQVGLDQLNAQVVYQWSYSRKNVDFRLL 221 Query: 209 IARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG-----PEGVGNASLSNIAGDA 263 + LK + D +++ G P G LR AR VGLKT +G PE +A G Sbjct: 222 VNDLKIVDADMIFFSGLEPIAGDFLRMARKVGLKTPVIGAFSNTPEMRAHAGAVGFEG-- 279 Query: 264 AEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPL 323 ++ Q P N+ V+ + + +Y A+ LA A++ TGS PL Sbjct: 280 --AIMFDFYNPCSQTPENRLFVNKFFSRYGRYPDAWAAQSYDALHILAKAIKFTGSRNPL 337 Query: 324 ALVKDLKA----NGANTVIGPLNWDEKGDLK 350 L ++ NGAN G +D G+L+ Sbjct: 338 DLSYAIRYADAFNGAN---GRYKFDRAGNLE 365 >UniRef50_Q7W0W5 Putative branched-chain amino acid-binding protein n=2 Tax=Bordetella RepID=Q7W0W5_BORPA Length = 404 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 6/290 (2%) Query: 11 GMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGV 70 GM A AD +K+ ++G+++GP A +G GA A + NA GGI G KL + Sbjct: 22 GMAPAAAEPGVTADSLKIGILGSLTGPFAIFGSGNLAGATLAFEQANAAGGIHGRKLEWL 81 Query: 71 EYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL 129 DD P + +A ++V + + V G S+ Q ++ + P + Sbjct: 82 SLDDESSPPKGIAAYKRLVGPEQVFAVFGPSASAVGQAMVQTFKTSTTPTFISVFSTPIV 141 Query: 130 TQRGYQHIMRTAGL-DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAA 188 T ++ RT + D QG A Y L+ +K +R+A+I +YG+ SV LKA Sbjct: 142 TDPPLPNVFRTGPMNDREQGVAIANYALDHLKAKRVALIRQSDEYGKSGGESVLQRLKAR 201 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 A V + + DF+A + ++ D + GY + RQAR +G++ +G Sbjct: 202 GAEPVALEVFNVYDTDFNAQLTKIAAARPDVLVVYGYPNPSAIITRQARQLGVEGVVLGS 261 Query: 249 EGVGNASLSNIAGDAAEG----MLVTMPKRYDQDPANQGIVDALKADKKD 294 G+ I G AA G M + + P Q +A A D Sbjct: 262 NSAGSRKYPEIVGKAAAGTQNIMTLEILPESSSTPQAQAFREAFVARFPD 311 >UniRef50_Q2RMX3 Extracellular ligand-binding receptor n=2 Tax=Bacteria RepID=Q2RMX3_RHORT Length = 392 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 14/334 (4%) Query: 8 IIAGMIALAISHT---AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 ++AG ALAI A AD IK+ ++G A NGA+ AI +NA GG+ G Sbjct: 11 LLAGAFALAIGFAGPAASADPIKIGGAFNLTGGQASLDGPAKNGAQLAIDTLNAAGGVNG 70 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 L V YD DP ++ ++++N D + +IG S + G+ I+ G Sbjct: 71 TPLELVVYDGKTDPAVVASLGSQLINSDKVSAIIGFSDSDPVLALGPNAQKAGVPFIAVG 130 Query: 124 ATNPELT-QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSV 181 AT+P+L Q G + G D++Q A + ++ +K + + ++ D +Y L++ Sbjct: 131 ATSPKLPDQIGDTMFLACFG-DNTQAAVGASFAIDDLKAKSVYVLEDTANEYATLLSKYF 189 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLK--KENIDFVYYGGYYPEMGQMLRQARSV 239 ++ + V+ D G+K F+A I ++K E D +Y +G ++RQ R Sbjct: 190 RETFEHLGGKVIGRDTYRTGDKSFTAQITKIKAAAEKPDILYIAATPDSIGLVVRQVRQA 249 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN---QGIVDAL-KADKKDP 295 GLK +G +G L + G +A + T + D A + DA KA P Sbjct: 250 GLKLPIVGGDGYDTPLLLEVGGASANNVYFTT-HSFVSDSAPGPMKTFFDAYGKAYGNAP 308 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDL 329 + + Y V +A A++R GS +P A+ K L Sbjct: 309 ENAFAALGYDTVMLVADAIKRAGSGDPAAIRKAL 342 >UniRef50_Q13IR8 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=21 Tax=Proteobacteria RepID=Q13IR8_BURXL Length = 399 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 2/256 (0%) Query: 13 IALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY 72 I LA + +D V V G +SG AQ+G+ G A++ IN GGI G L Sbjct: 33 INLAHAAGTSSDPYWVGVTGPLSGQDAQYGEQWKRGFDLALEQINGSGGIDGHPLNYDFE 92 Query: 73 DDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ 131 D DP+QAV +A K V+D I +G L S ++ AS +Y+ G++ ++P+ T+ Sbjct: 93 DSRSDPRQAVQIAQKFVDDKRILLELGDLSSGASMAASPVYQRGGLVQFGFTNSHPDFTK 152 Query: 132 RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANAN 191 G ++ TA + + P A Y + ++IA+++ +G + A Sbjct: 153 GG-DYMWSTAISQAEEQPMLAHYATTGLGFKKIAVLYLNTDWGRTSKDIFAKAATSDGAQ 211 Query: 192 VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV 251 VV +G EKDF A + R++ N D + YY + Q++RQAR+ G++ V Sbjct: 212 VVAAEGYQPNEKDFRATLTRIRSANPDSIVLISYYSDGAQIVRQARAAGVREPIAAVGSV 271 Query: 252 GNASLSNIAGDAAEGM 267 + + G A G+ Sbjct: 272 YSPKFLELGGAAVNGV 287 >UniRef50_B8FGX7 Extracellular ligand-binding receptor n=3 Tax=Deltaproteobacteria RepID=B8FGX7_DESAA Length = 392 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 137/283 (48%), Gaps = 14/283 (4%) Query: 1 MKRNAKTIIAGM-IALAISHTAMA----DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 MKR+ II + IALA+S A A IK+ + ++G I + G+ A+ ++D Sbjct: 1 MKRSLSLIIGCLVIALALSPNAWAWGKAKTIKIGINAPITGDIPKVGEGTKYAAQMWLED 60 Query: 56 INAKGGIKGD----KLVGVEYDDACDPKQAVAVANK-IVNDGIKYVIGHLCSSSTQPASD 110 + A GG++ D K+ V D+ + AV K I D + ++G S PA Sbjct: 61 VEAAGGLEIDGKKYKVELVIEDNEAKAESAVKANTKMITQDEVIAIVGPQSSKQAVPAGG 120 Query: 111 IYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD- 169 + D MI+P +TNP+ T + ++ R LD QGP A +I E + A+++D Sbjct: 121 VANDWATPMITPWSTNPDST-KDRPYVFRGCFLDPFQGPVVANFITEEFGATKAAVLYDV 179 Query: 170 KQQYGEGLARSVQDGLKAANA--NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYP 227 Y +GLA + + + +VV F+ T + DFS+ + ++ + + ++ YY Sbjct: 180 ASDYPKGLAEFFKIAWEKIHGPGSVVAFESFTTKDADFSSQLTKIIQSGAEVIFTPQYYN 239 Query: 228 EMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVT 270 E+ +++QA +G + +G + G+A N+ G G+ + Sbjct: 240 EVALIVQQAHELGWQKPIVGSDSWGSAETVNLCGPDCYGLFFS 282 >UniRef50_C7QC96 Extracellular ligand-binding receptor n=2 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QC96_CATAD Length = 412 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 4/248 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +++ V G +SG G G + AI++ NAKG + + L E DD D A Sbjct: 57 LEIGVQGPLSGSNQALGLNIDWGVKLAIQEANAKGDLPFN-LSIKESDDQGDQSHGATAA 115 Query: 86 NKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 ++ D + V+G S + A +Y ++ ISP ATNP+LT G++ R D Sbjct: 116 QLLIQDSKVLGVVGPAFSGPSAAAGSLYSSANLVAISPSATNPKLTASGFKTFYRVVAND 175 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 + QG AA Y+++ +K + ++ DK QYG+GL+ ++ LK A V D G +D Sbjct: 176 NIQGKAAADYMVKGLKATNVYVVDDKTQYGQGLSTAIVAELKQDGATVE-TDSAPQGTQD 234 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG-DA 263 +S L +++ +YY GYY + G + ++ G + +G + + AG DA Sbjct: 235 YSQLASKVAGSGAKAMYYAGYYADGGVFAKALKAAGFGGTMVSGDGSKDPNFVTTAGKDA 294 Query: 264 AEGMLVTM 271 AEG T Sbjct: 295 AEGWQFTC 302 >UniRef50_Q2YK50 Leu/Ile/Val-binding protein homolog 8 n=68 Tax=Alphaproteobacteria RepID=LIVB8_BRUA2 Length = 403 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 13/252 (5%) Query: 3 RNAKTIIAGMIALAIS---HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 R ++ +I + +A+S TA D+K + +SG +A G+ G A+ ++NA Sbjct: 2 RLSRLLIGASLGVALSSTVFTAALADVKFGSLYPISGSLALLGEESARGLELAVDEVNAA 61 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGIKG+K+V +E DA D QA A ++++ G+K + G S+ AS + E GI Sbjct: 62 GGIKGEKVV-LERGDAVDNNQATGEARRLISLVGVKAIFGTYSSARVIAASQVSELAGIP 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKP--------QRIAIIHDK 170 GA E+T RG Q++ RT + + +++ + P +I II++ Sbjct: 121 YFEMGAVADEVTGRGLQYLFRTNPTAENMAKDSVDMLIKGIAPGLGKDPKDMKIGIIYED 180 Query: 171 QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 YG +A +D KAA VV G + D S+L+ L+++ D V Y + Sbjct: 181 SSYGTSVAGHQEDNAKAAGLTVVLKSGYPSNTVDMSSLVLELREKGADVVMQTSYQNDSV 240 Query: 231 QMLRQARSVGLK 242 L+QA G K Sbjct: 241 LFLQQANEAGYK 252 >UniRef50_A5CZW6 ABC-type branched-chain amino acid transport systems, periplasmic component n=3 Tax=Peptococcaceae RepID=A5CZW6_PELTS Length = 402 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 85/306 (27%), Positives = 146/306 (47%), Gaps = 13/306 (4%) Query: 24 DDIKVAVVGAMSGPIAQWGDME-FNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 D +K+ +G SG +G E G R A+ DIN GG+ G K+ +E D + + V Sbjct: 42 DTVKIGFLGNKSG----YGGSECLKGIRMAVDDINRTGGLLGKKVELMEGDHGGNSSETV 97 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 V +V+ +IG + T+ A+ + +D +++ISP A+ + + G ++I R A Sbjct: 98 RVTQSLVDRKAAVIIGDNTTGITKLAATVCQDNNVVLISPTASGSGVVEMG-EYIFRIAL 156 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 LDS P +Y+ +T++ +++A++ + + Y EGLA + L + +V I Sbjct: 157 LDSVAVPAVVRYLADTLEWKKVALVKNIGRSYTEGLAAIFKPALVRSGIEIVNEQKIRKN 216 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 + DFSA +A LK+ + D + + G E +++ R GL+ +G +G+ L G Sbjct: 217 DTDFSAQVAALKQSSFDGLVFPGNNVEAYLFIKEMRKQGLRQAVVGGDGMYTRELIENGG 276 Query: 262 DAAEGMLVTMPKRYDQD---PANQGIVDALKADKKDPSGPYVWI--TYAAVQSLATALER 316 EG L D + P V+ +A + + P V+ Y AV A A+ Sbjct: 277 IDVEGTLTYAGFAVDPESASPETMEFVEKYRAVNNNLT-PDVFAAQAYDAVNLAADAIRA 335 Query: 317 TGSDEP 322 GS EP Sbjct: 336 AGSAEP 341 >UniRef50_B8FK55 Extracellular ligand-binding receptor n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK55_DESAA Length = 377 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 8/259 (3%) Query: 10 AGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVG 69 AG +L I+ T D +K+A + A +G A F R + IN +GG+ G + Sbjct: 18 AGRTSLGIAQTG--DSVKIAAIFAQTGAAAPMDKEAFEALRWTCQRINHQGGVLGKPVEV 75 Query: 70 VEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL 129 +EYD+ ++A K + DG V+G S+ + + + ++ I MISP +TNP L Sbjct: 76 LEYDNQSTSLGSLAAGKKAIRDGATAVVGASWSAHSLAIAHLMQEAKIPMISPASTNPAL 135 Query: 130 TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAA 188 T+ G +I R D G A + E + + + ++ + Q+ LA D Sbjct: 136 TKIG-DYIFRVCASDEFSGKALADFASERLNAKTVVVLTNANSQFSRDLAAFFIDQFN-- 192 Query: 189 NANVVFFDG-ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG 247 V ++G DFS ++ ++K + V+ GY + G +LRQA+++G+K+ F+G Sbjct: 193 KKGTVLWEGDYLQDASDFSQILEKVKSLQPEVVFVPGYPRDSGYILRQAQNMGVKSIFLG 252 Query: 248 PEGVGNASLSNIAGDAAEG 266 +G N ++ AG A G Sbjct: 253 ADG-WNYLMTEYAGSAVNG 270 >UniRef50_D0BNJ8 Branched-chain amino acid ABC transporter amino acid-binding protein n=2 Tax=Granulicatella RepID=D0BNJ8_9LACT Length = 388 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 80/312 (25%), Positives = 147/312 (47%), Gaps = 22/312 (7%) Query: 34 MSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGI 93 ++G +A +G N + A++ KG + +L V YD+ + + +VA K+V++ + Sbjct: 39 LTGNVAAYGSAMDNAVKLAVEQ---KGKLLDKELKYVSYDNKSEKTEVASVAKKLVSEKV 95 Query: 94 KYVIGHLCSSSTQPASDIYEDEGILMISPGAT----------NPELTQRGYQHIMRTAGL 143 V+G + Q + I E I + P T NPE Y +I R Sbjct: 96 VGVVGPATTGDAQVSIPIMEQAKIPAVFPATTGDGITLKDAKNPESV---YDYIFRVCFS 152 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAAN--ANVVFFDGITA 200 D+ QG A ++ + ++AI+ D Y +GL+ + + A +V + + Sbjct: 153 DNYQGVVGAGFVSQKFPNAKVAILQDSASDYSKGLSEAFEKTYTDAKIGGQIVAKETYQS 212 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 + DF A++ LK ++ D +Y GYY E+G +++QAR +G+ +G +G+ + L+ +A Sbjct: 213 KDTDFQAVLTSLKSKSFDVLYIPGYYEEVGLIIKQARELGITQPIVGGDGLSSEKLAELA 272 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALKADK-KDPSGP--YVWITYAAVQSLATALERT 317 G+ A V + + + + +KA K K + P + + Y A Q L A+E+ Sbjct: 273 GNKANLTNVFYTAHFSAKSTDADVQEFIKAYKEKYNTTPDSFSALAYDAAQLLMKAIEKA 332 Query: 318 GSDEPLALVKDL 329 GS + A+ K L Sbjct: 333 GSTDAQAIKKAL 344 >UniRef50_B8IDJ0 Extracellular ligand-binding receptor n=4 Tax=Rhizobiales RepID=B8IDJ0_METNO Length = 388 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 163/361 (45%), Gaps = 17/361 (4%) Query: 5 AKTIIAGMIALAISHTAMA----DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 A +I M + +A A +++ +V ++GP A G NGA+ A++ +N G Sbjct: 13 ASAVIGSMAGPGLIRSACAQGAGSTVRIGMVLPVTGPGADAGRFALNGAKLALEAVNKAG 72 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCS-SSTQP---ASDIYEDEG 116 G+ G L V DD AV +K+ + ++G L S STQ A DI + Sbjct: 73 GVLGKPLEIVTEDDQTTNPGAVLAFSKLASQ--SDLVGFLGSIRSTQNHAMAPDILKTGK 130 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 + G T+P LTQ G + R DS A + + T+ ++ A+IH +G Sbjct: 131 PVCF--GGTDPVLTQMGNPWLFRFRPNDSYSARVIADFGINTLAKKKWAVIHSTDAFGTS 188 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFV-YYGGYYPEMGQMLRQ 235 A+++ + L A+A+V G + +DF+ ++ +++ + + Y + ++G RQ Sbjct: 189 GAKALTEALGKASASVALDQGYSNQSQDFTPVVLAIRQSGAEIIGSYFTFENDLGIFARQ 248 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKK-D 294 R +G+ ++G + N + +AG + G D A + A +A K Sbjct: 249 LRQLGVTVPWVGSPSITNVTALKLAGPSLYGTYGVADYAEDSSEAARAFGKAYRAATKIA 308 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKD-LKANGANTVIGPLNWDEKGD-LKGF 352 P W TY AV LA A+ + G +P A+ + L G G N+D+ GD L G+ Sbjct: 309 PDNQSSW-TYDAVTVLALAINKAGKTDPQAIREALLSVRGHEGAEGTYNFDKNGDGLHGY 367 Query: 353 D 353 + Sbjct: 368 N 368 >UniRef50_C2KVU8 Branched chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=5 Tax=Clostridiales RepID=C2KVU8_9FIRM Length = 401 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/335 (27%), Positives = 157/335 (46%), Gaps = 14/335 (4%) Query: 27 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVAN 86 K+ G ++G A +G+ NGA AI +INA GGI G ++ + DD D ++A+ N Sbjct: 51 KIGGQGPLTGGAAVYGNAVVNGAEIAIDEINANGGINGYQIEYKKADDEHDQEKAINAYN 110 Query: 87 KIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSS 146 + + G+++++G S+ E + + ++SP + E+T +++ R D + Sbjct: 111 SLKDWGMQFLVGPTTSAPAIAVGTEAEGDNMFVLSPSGSAVEVTAP--KNVFRVCFSDPA 168 Query: 147 QGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITA-GEKD 204 QG +A+YI ++I II+D Y G+ S VV + TA KD Sbjct: 169 QGTKSAEYIGSHNLGKKIGIIYDSSDVYSSGVHDSFVAEAPKQGLEVVADEQFTADSNKD 228 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV-GNASLSNIAGDA 263 FS + ++K + V+ YY E +L QA ++G K F G +G+ G ++ N Sbjct: 229 FSTQLQKMKDSGAELVFLPFYYSEAALVLTQANTMGFKPTFFGCDGMDGILNVENFDVSL 288 Query: 264 AEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG---- 318 AEG+++ P D +D V K K+ + Y AV ++ A+E+ G Sbjct: 289 AEGLMLLTPFAADAKDDLTVNFVKNYKEKYKETPIQFAADAYDAVYAIKAAVEKAGLTPD 348 Query: 319 ---SDEPLALVKDLKANGANTVIGP-LNWDEKGDL 349 SD A+ K + + + G + W+E GD+ Sbjct: 349 QSVSDLGTAMEKAMTEISLDGLTGTGMKWNEAGDV 383 >UniRef50_A9KNN4 Extracellular ligand-binding receptor n=4 Tax=Firmicutes RepID=A9KNN4_CLOPH Length = 386 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 88/337 (26%), Positives = 164/337 (48%), Gaps = 10/337 (2%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 ++ A+ IK+AV G M+G A++G N A+ + N KGG+ G ++ V+YDD + Sbjct: 35 SSSAETIKIAVAGPMTGDNAEYGIGFTNAAKMMADEWNKKGGVLGKQIKIVQYDDKNSSE 94 Query: 80 QAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 +A +A KIV++G I VIGH S A+ IY++ ++ ISP A++P+ + G +I Sbjct: 95 EAATIAQKIVSEGDIAGVIGHFSSGVCLTAAPIYQENKLVEISPSASHPDYSLVG-DYIF 153 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ---DGLKAANANVVFF 195 R + S++ + + + ++I II K +G ++ ++ + L ++V Sbjct: 154 RNNTVISAEAAASIDIAVNDLGKKKIGIISIKTDWGTNTSKIIKELVEKLGIDGVSIVAH 213 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 + + G D+S I +L + D V G Y + + +Q + + + +G + Sbjct: 214 EEVVEGSDDYSPAITKLNQAGADVVICAGMYNLVAPVAKQYKQINPDIKVVGFSNSYSQQ 273 Query: 256 LSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWIT---YAAVQSLAT 312 L + G A EG V P + + ++ I + + A +K+ +T Y +V L + Sbjct: 274 LIELGGLAIEG--VCFPVIFFSESKDEKIKNYVSAFEKEFGNKPSALTSQAYDSVGMLLS 331 Query: 313 ALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDL 349 A+E+ GS + A+ L V G +DE G++ Sbjct: 332 AIEKAGSTDKEAVRNALAEVDYEGVTGQTKFDENGNV 368 >UniRef50_D1B9T5 Extracellular ligand-binding receptor n=2 Tax=Synergistaceae RepID=D1B9T5_THEAS Length = 384 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 153/336 (45%), Gaps = 17/336 (5%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 +AMA +IK+ + A++G A +G E A+ A+++INAKGG+ G+KLV V YD + Sbjct: 21 SAMAGEIKIGYLAALTGDYAGYGQTELRAAQLAVEEINAKGGVLGNKLVLVPYDWRTRAE 80 Query: 80 QAV-AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT--QRG--Y 134 AV AV I D + +IG S + + I + I +TNP +T ++G Sbjct: 81 DAVNAVRRMIDQDKVVAIIGANASGANIATAPIVNKAKVPQIGTVSTNPLVTVDEKGKVR 140 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVV 193 + R D QG A + ++ A+++D Y +GL + +V Sbjct: 141 PYSFRICFTDPYQGKVLANLAAVKLGKKKGAMLYDVASDYSQGLREFCIKEFEKLGGKIV 200 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK-TQFMGPEGVG 252 + + DF A + ++ D ++ G +M +++QAR +G+K MG +G Sbjct: 201 ADEAYKGTDTDFRAQLTNVRNSGADVLFLPGMGKDMALIIKQARELGMKDLVIMGGDGYA 260 Query: 253 NASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV--WITYAAVQSL 310 + + IAG+A G +DP Q A K KD +V + Y +V L Sbjct: 261 D-FMYEIAGNALVGTYWVNHTSL-EDPGMQPFFKAYKEKYKDECKEFVNGVLAYDSVYWL 318 Query: 311 ATALERTGSDEPLAL------VKDLKANGANTVIGP 340 A A++R G + A+ KDLK + A I P Sbjct: 319 ADAIKRAGKVDGTAIAQALEKTKDLKLHHAVLSINP 354 >UniRef50_B5YK45 Leu/ile/val-binding protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YK45_THEYD Length = 400 Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 92/373 (24%), Positives = 167/373 (44%), Gaps = 15/373 (4%) Query: 1 MKRNAKTIIAGMIALA-ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MKR + I+A M++ I+ + AD IK +++G +A+ G++ NG + +N K Sbjct: 1 MKRLSILILAVMLSFCLITFSFAADVIKFGAALSLTGKLAKEGNLVKNGYELWKETVNKK 60 Query: 60 GGIK-GDKLVGVE---YDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYED 114 GGIK G+K V+ YDD DP +A + K++ DGIK ++G S S S I E Sbjct: 61 GGIKIGNKYYKVDIKYYDDESDPNRAAKLVEKLITEDGIKLILGPYGSESVFSTSAITEK 120 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETV-KPQRIAIIHDKQQY 173 G LM+ GA +L RG++++ + + K ++ KP +AI++ + Sbjct: 121 YGALMVQGGAAADKLYTRGFKNLFGIYTVATEYMDDTLKMLMNKAPKPTTVAIVYSNDLF 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 +A+ + + VV++ G +D S +I +K +N D + G++ + ++ Sbjct: 181 STQVAQGAKASAQKYGYKVVYYKDYPKGTQDLSTVIVEIKAKNPDILIGCGHFQDTIVIV 240 Query: 234 RQARSVGLKTQFM----GPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP---ANQGIVD 286 +Q++ L + + GP S + G P +DP +N V Sbjct: 241 KQSKDYKLNPKAIAFSVGPTLPDFVSALKSDAEYILGSAQWTPTLKYKDPVFGSNANFVK 300 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKD-LKANGANTVIGPLNWDE 345 A K + + AA A+E+ G+ + +++ L + T+ G + +D Sbjct: 301 AFKTKFRVEPNYHAAGGAAAAVIFQRAIEKAGTFTDINRIRESLLSFNEETLFGKIRFDS 360 Query: 346 KGDLKGFDFGVFQ 358 G + G V Q Sbjct: 361 SGKVVGKGMPVIQ 373 >UniRef50_B9JHQ3 ABC transporter substrate-binding protein n=7 Tax=Rhizobiales RepID=B9JHQ3_AGRRK Length = 397 Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 86/338 (25%), Positives = 149/338 (44%), Gaps = 19/338 (5%) Query: 1 MKRNAKTIIAGMIALA-----ISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAI 53 + R A I ++AL IS A A+ IK+ +V MSGP A++G +GA A+ Sbjct: 5 ITRRALCISTALLALVTLAPNISGAARAEGAPIKLGIVAPMSGPNARYGAFSMHGAELAV 64 Query: 54 KDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIY 112 K+IN GG+ G K+ D P + V+ ++++ D + +VIG + SS T + Sbjct: 65 KEINDAGGVDGHKIELYNADSQGTPVEGVSATRRLIDEDEVGFVIGDVSSSVTLAMQPVV 124 Query: 113 EDEGILMISPGATNPELTQ----RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH 168 ED +L+++ ++NP++T G++ R D ++ AKY E + A++ Sbjct: 125 EDAEVLLLNAASSNPKITYGAGVGGFKWTYRNYPTDENRALIVAKYAAEQRGFTKFAVLS 184 Query: 169 DKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPE 228 YG + L ++ D GE DF +++A+++ + G Sbjct: 185 VDSDYGRSAIEFTKKYLPQFKGEILSEDYYKEGEVDFRSVLAKIRDNGAQAIILYGLADT 244 Query: 229 MGQMLRQARSVGL--KTQFMGPEGVGNASLSNIAGDAAEGML---VTMPKRYDQDPANQG 283 + RQ +GL K +G A A EG + +P +D PA++ Sbjct: 245 TPIIARQMIELGLAGKVTLIGNGEFNTEKTIKSAPTALEGAVEAAAWIPA-WD-SPASKA 302 Query: 284 IVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 V+ A K+ + ++ + V LA A+ GS E Sbjct: 303 FVEKFTATYKEAPNNHAYVHWDTVHLLAQAIHEAGSIE 340 >UniRef50_B4SCM8 Extracellular ligand-binding receptor n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SCM8_PELPB Length = 373 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/338 (24%), Positives = 151/338 (44%), Gaps = 20/338 (5%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY-DDACDPKQAV 82 + I + ++G A +G G AI++IN D + V Y DD DP++ V Sbjct: 26 ETINIGCSLPLTGEGANYGRSVKEGVDLAIEEINQSEMF--DLPLKVIYEDDKMDPREGV 83 Query: 83 AVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 NK++ D + +IG SS T + I ++++ AT + G +I R Sbjct: 84 NAINKLITADNVPIIIGPFGSSITLAVAPIANKNKVVLLGASATADNIKDAG-DYIFRIT 142 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 +S QG A + ++ ++ AII+ YG L + + V+ +G+ G Sbjct: 143 PPNSKQGNDVASFCFNSLNSKKAAIIYQTNDYGTTLKTAFESEYLKLGGEVLIVEGVDLG 202 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 KDF I ++K + +D V++ + E G L+Q++ +GL +F+ +G L +AG Sbjct: 203 NKDFKTQILKIKSKQVDVVFFPLHVAESGNFLKQSKELGLNVKFISCDGAMVDDLLKLAG 262 Query: 262 DAAEGMLVT-MPKRYDQDPANQGIVDALKAD--KKDPSGP--YVWITYAAVQSLATALER 316 +AAEG T + Y N ++++ + KK P Y Y LA AL++ Sbjct: 263 NAAEGTYYTSLALAYGM---NDSLINSFNTNFKKKYNKEPDVYAAYYYEVTYILAHALKK 319 Query: 317 TGSDEPLALVKDLK-----ANGANTVIGPLNWDEKGDL 349 + + +K++ N N + G ++D G++ Sbjct: 320 ANGN--IGQIKEILYSINGENAYNGITGLTSFDTYGEV 355 >UniRef50_B9L4C0 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L4C0_THERP Length = 443 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/268 (27%), Positives = 129/268 (48%), Gaps = 9/268 (3%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + I +A + +SG AQ G+ G AI D+ G + G K+ V D C+P+ A Sbjct: 77 EPIVLAWMLTVSGGTAQLGEDSKRGIEIAIDDLG--GQLLGHKIELVGEDSGCNPEGGQA 134 Query: 84 VANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI---MR 139 A ++ N I ++G CSS + + I + G++M+SP T P+LT +H+ +R Sbjct: 135 AATRLAANPRIVAIVGSSCSSEARVGAPIIDQAGLVMVSPSNTAPDLTDPA-KHVNAYLR 193 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 A D QG AA++++ + +++A IHD Y E LA + +K VV + ++ Sbjct: 194 VAHNDKVQGRVAAEFVVNKLGLKKVATIHDGSLYAEQLANVFAENVKKLGGTVVAQEAVS 253 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV-GLK-TQFMGPEGVGNASLS 257 + D ++ R+ + + +YY + P + QA+ + GL+ + M +G+ Sbjct: 254 PDDTDMRPVLTRIATQQPELIYYPIFNPAGSFITIQAKEISGLENVKLMSADGLLEPQTV 313 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQGIV 285 AG AA G+ ++ P P Q V Sbjct: 314 QNAGQAAVGLYLSGPDLTVLGPKYQEFV 341 >UniRef50_A0NLZ5 Hydrophobic amino acid ABC transporter (HAAT) family, amino acid-binding protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NLZ5_9RHOB Length = 400 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 106/396 (26%), Positives = 175/396 (44%), Gaps = 40/396 (10%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 + T +A L A+ADD K+ ++ ++GPIA + N A A+K +N +GG+ Sbjct: 2 KKLTTFMAAAALLGSGTAALADDTKIGILMDITGPIANFIPPLQNAADLAVKQVNEQGGL 61 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDE-GILMI 120 G V V D + AV A K+VN + + ++G L S +T A++ G+ I Sbjct: 62 LGGSAVAVYGDTTGTAQGAVDAAQKLVNVENVPIIMGSLMSGTTIAAAEAAIIPAGVPQI 121 Query: 121 SPGATNPELT-QRGYQHIMRTAGLDSSQGPTAAKYIL-ETVKPQRIAIIHDKQQYGEGLA 178 SP AT+P +T + R D+ QG AK ++ E +K ++A+ + YG G+ Sbjct: 122 SPTATSPAMTFLEDNGLVFRIVPSDNYQGEILAKMVMDEGIK--KVALTYVNNDYGVGIG 179 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKK---ENIDFVYYGGYYPEMGQMLRQ 235 + D A +V + + + +A L K E + + Y G G+++RQ Sbjct: 180 ETFIDAYTEAGGEIVAEAKHEEKKDSYRSELASLAKGDAEALVVIAYAG--DSGGKIVRQ 237 Query: 236 ARSVGLKTQFMGPEGVGNASL-SNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKD 294 A GL T+F+G +G+ + L N+ DA + + P ++PA + + DA A + Sbjct: 238 AIEGGLFTKFVGTDGLRDELLIQNVGADALKTSFFSSPTSPAENPAQKALHDAFNAAYGE 297 Query: 295 PSG-PYVWITYAAVQSLATALERTGSDEPLALVKDLK--ANGANTVIGPLNW-------- 343 + +V TY A A+E+ GS + + + LK A +GP W Sbjct: 298 GADKAFVDQTYDATFLALLAIEKAGSTDRAKIAEALKEVAMAPGEKVGPGEWAKAIALIK 357 Query: 344 ----------------DEKGDLKGFDFGVFQWHADG 363 DE GD+ G+ G F DG Sbjct: 358 EGKDIDYEGASGSAEFDENGDVGGY-IGKFVVDGDG 392 >UniRef50_C5ELH4 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELH4_9FIRM Length = 402 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 5/329 (1%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D I++ + A++GP G G A+++INA GG+ G L V DD + Sbjct: 49 DTIRIGITTALTGPSPLNGQRTKEGVTMAVEEINANGGVAGKTLEAVIEDDGATTSGTMN 108 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 NK++++ + +IG SS+ + +++ + + G ++P L ++ R Sbjct: 109 SVNKLLSENVVALIGPHMSSNVVAVQEQLKNQKMPFLY-GGSSPTLLDLNNEYGFRVRPS 167 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 DS A KY+ + ++ + I +I D + V+ LK + +G G+K Sbjct: 168 DSLACKIACKYLTDKLQCKNIGMIFDNDNWATSAKDVVEATLKEQGVGFI-SEGYNTGDK 226 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS-LSNIAGD 262 D + + +LK ID + G+ E+ + +Q + VG+ T MG G ++ L I Sbjct: 227 DMTGQLTKLKNSGIDALIIWGHDAEIAIIAKQIKEVGIDTPIMGSAGFAMSTVLDLIDPS 286 Query: 263 AAEGML-VTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 +EG+ V+ Y D G V Y Y AV L A+ER GS E Sbjct: 287 VSEGICSVSEFTPYSDDERVSGFVKRYHEKYNSDPDLYSAAYYDAVYLLKDAIERAGSTE 346 Query: 322 PLALVKDL-KANGANTVIGPLNWDEKGDL 349 P L L + G V+ + +KG++ Sbjct: 347 PDQLRTALAETKGLAGVMSTMTASDKGEM 375 >UniRef50_A5N0V5 LivK n=2 Tax=Clostridium kluyveri RepID=A5N0V5_CLOK5 Length = 378 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 4/262 (1%) Query: 8 IIAGMIALA-ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 ++ G + LA + +++IK+ V ++G ++ G N + ++ NA GGI G K Sbjct: 12 LVLGSVVLAGCGKQSESEEIKLGAVFPLTGDVSVMGQACKNALQMLEEETNASGGINGKK 71 Query: 67 LVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGAT 125 + DD P + K++N+ + V+G S + I I MIS +T Sbjct: 72 VKFYFEDDENKPSNSANAIQKLINNNKVVGVVGSYASKCSISMGPIAASNKIPMISV-ST 130 Query: 126 NPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDG 184 +P++T+ G +++ + D+ QG A + VK + A+++D Y +GL Sbjct: 131 SPKVTKNGGEYVFTSTFNDTFQGTIIADIAAKDVKAKTAAVLYDVGNDYDKGLNEFFTTN 190 Query: 185 LKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ 244 + + V+ AG++DFSA + +KK N D + YY + + +QAR++G+ + Sbjct: 191 FEKSGGKVLASLTFNAGDQDFSAQLTNIKKLNPDVLVIPDYYGTVALIAKQARNLGITST 250 Query: 245 FMGPEGVGNASLSNIAGDAAEG 266 F+G +G + +L IAGDA G Sbjct: 251 FIGGDGWDSPALFEIAGDAVNG 272 >UniRef50_Q7WM42 Putative amino acid ABC transport system, substrate-binding protein n=2 Tax=Bordetella RepID=Q7WM42_BORBR Length = 379 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 6/320 (1%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV-AV 84 I V V +SG A G + GA A++ INA GG+ G L D+AC+P + V +V Sbjct: 27 IVVGVSTPLSGSAAFQGQHDRWGAELAVEQINAAGGVLGRPLQLNVQDNACNPAEGVNSV 86 Query: 85 ANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR----GYQHIMRT 140 + N + V G +CSS T I E + M+ ++ +T++ G R Sbjct: 87 GRMLENRDLVAVSGAMCSSVTLALMPIVERASVPMLVSSSSAASITEKAGAGGNIWTFRA 146 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 D S A Y+ + + ++IA++ + YG G A ++ LK + + Sbjct: 147 GPSDDSMAVALATYLKDEARFKKIAVLGENTDYGRGGAAAIAKALKPLGVTITSSEYYDK 206 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G +DF+ ++ RLK D + + +RQ R G++ G +G I Sbjct: 207 GTQDFTTVLTRLKLAAPDAIALYTVGADQINFIRQYRGFGMRVPLTGRIELGGLQAEGIK 266 Query: 261 GDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 A G + D PANQ V A K K+ I+Y +Q LA A++R GS Sbjct: 267 SGAINGATSVFQYAAELDTPANQAFVKAYKEKYKEDPLLQSAISYENIQLLADAIKRAGS 326 Query: 320 DEPLALVKDLKANGANTVIG 339 + A+ ++A+ +++G Sbjct: 327 VDRKAVRDAIQASDYASMMG 346 >UniRef50_Q12GM8 Extracellular ligand-binding receptor n=1 Tax=Polaromonas sp. JS666 RepID=Q12GM8_POLSJ Length = 376 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 86/354 (24%), Positives = 162/354 (45%), Gaps = 12/354 (3%) Query: 2 KRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 K A + AG +ALA S A +KV V ++G A +G + A+K N GG Sbjct: 8 KLQACVMFAG-VALAFSAGA---QVKVGVFVPLTGDAAGYGQSALEAIQLAVKQKNDAGG 63 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKI-VNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 + G K+ V DD P+Q+V VA ++ +DG+ ++G + S ++ A+ + G I Sbjct: 64 VLGQKIELVVRDDGAKPEQSVTVAKRLATSDGVLVMLGSISSPASFAATQVALQTGTPQI 123 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK-PQRIAIIHDKQQYGEGLAR 179 T +T +G + R D+ ++I+ +++ ++ +G G Sbjct: 124 VLLGTAQRITTQGNPWVFRGTIPDTKLSGDLVEFIIRKYPGKKKVGYLYVNDDFGRGGFE 183 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + +++ +V + G+ DF++ + +++ EN D Y E + QA+ Sbjct: 184 AFKARAESSGLTIVAEEKYAPGDLDFTSQLTKIQSENPDVFVDWSRYTEGALVAIQAKRK 243 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPY 299 G+ G EG+ + + +AGDA++GM+ +P N I L D K Sbjct: 244 GMTLPHFGSEGLSHPNFIKLAGDASDGMMYPVPFSMTTQSGNN-IAVTLAQDIKKTYNKE 302 Query: 300 VWITYA----AVQSLATALERTG-SDEPLALVKDLKANGANTVIGPLNWDEKGD 348 + T+A A++++ A+E++G + + L LK+ ++ G +D KGD Sbjct: 303 IEYTHALAYDAMRAVIFAIEKSGTTTDKLKFRDALKSLEFDSTRGKFKFDAKGD 356 >UniRef50_A8R9T6 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R9T6_9FIRM Length = 396 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 81/329 (24%), Positives = 154/329 (46%), Gaps = 12/329 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 I++ + ++G +A +G E+NGA+ AIK N K K VE D+ ++A A+A Sbjct: 43 IRIGMNFELTGNVANYGTTEYNGAKLAIKQANENSEHKF-KYEIVEGDNKSAAEEATALA 101 Query: 86 NKI-VNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG---YQHIMRTA 141 K+ +DG+ ++G S ++ + D +L++SP AT T Y ++ R Sbjct: 102 TKLATSDGVDGMVGPATSGNSLATYQVANDSKVLVVSPSATANGATMNNGKVYDYVYRVC 161 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITA 200 D++QG + + + ++ A++ D Y +G+A+S + K +V Sbjct: 162 FEDNTQGAAMGVFAYDNLGKRKAAMLSDSSNDYAKGMAKSFKKKFKEKGGEIVTELNYAE 221 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 + DF+ + ++K + D +Y GYY E+G +++QARS+G+ +G +G ++ L +A Sbjct: 222 KDTDFNVQLTKIKDMDFDVLYIPGYYNEVGLIIKQARSLGIDVPIIGGDGFDSSDLVKLA 281 Query: 261 GDAAEGM----LVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 G AE + T + ++A K + + + + Y A + A E+ Sbjct: 282 G--AENLNDVYFTTAYTTVNASDELTAFIEAYKEEYGEEPSMFSALAYDATNVMIEAYEK 339 Query: 317 TGSDEPLALVKDLKANGANTVIGPLNWDE 345 G + A + L + N V G +D+ Sbjct: 340 AGKKDMDAAKEALDSMKFNGVTGSFTFDK 368 >UniRef50_C8X2A2 Extracellular ligand-binding receptor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2A2_DESRD Length = 393 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 9/312 (2%) Query: 47 NGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSST 105 +G A+++IN++GGI G L V YD D AV K+++ D ++ +IG + S + Sbjct: 66 HGIEIAVQEINSQGGIDGRPLEVVYYDSKDDATTAVNAVQKLISVDEVEAIIGPMMSGNV 125 Query: 106 QPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIA 165 A+ + + +++++P T+P +++ G + +D + + + Sbjct: 126 LAAAPLCQRNNVVLLTPTGTSPRISEAGSYTFRLCSRIDDQARALVQEALSRVGADPTVT 185 Query: 166 IIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGY 225 I++ + YG+G L + + G+KDF A + ++K+ N D ++ GY Sbjct: 186 ILYSNEPYGKGSKELFTRYLAEQDITPATVESFQRGDKDFQAQLTKIKQLNPDILFVPGY 245 Query: 226 YPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPA-NQGI 284 E ++ QAR +G+ +G G +AG AAEG L+ +D NQ Sbjct: 246 LQETAPLISQARQMGINALSVGVFGDMAPKYIELAGKAAEGHLIAGEYNKHKDTEHNQDF 305 Query: 285 VDALKADKKD-PSGP----YVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVI 338 V+A +A D P P + +TY AV L + TG+ A+ L + + + Sbjct: 306 VNAYEALLADQPKAPENIMFAALTYDAVHLLRQSFS-TGATTGSAIQSFLDELEAFDGIT 364 Query: 339 GPLNWDEKGDLK 350 G L++D GD++ Sbjct: 365 GTLSFDANGDVQ 376 >UniRef50_C4ZMW4 Extracellular ligand-binding receptor n=4 Tax=Proteobacteria RepID=C4ZMW4_THASP Length = 401 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 8/336 (2%) Query: 2 KRNAKTIIAGMIALAISHTAMA-DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 KR ++ M+ A+ D+K+ ++ A+SGPIA ++ A+ +N +G Sbjct: 3 KRTVAAVVGAMLGAAVVAAPAHAQDVKLGLMAAISGPIAALAPPMAAASKLAVAHVNEQG 62 Query: 61 GI-KGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSST-QPASDIYEDEGI 117 GI KG KL V D AC+P+ A VA K VN D + V+G CS + A+ + G+ Sbjct: 63 GILKGGKLEVVLGDSACNPQNATDVATKAVNIDRVIAVVGPACSGAVLASANSVTIPAGV 122 Query: 118 LMISPGATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 LMI+P T+PE+T+ + + RT D QG A+ L+ ++A+ + YG+G Sbjct: 123 LMITPSGTSPEITKLKDKDLVYRTLPSDDYQGRALAR-TLKARGISKVAVAYLNNDYGKG 181 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG-QMLRQ 235 LA S + +A + + G G+ + + +A L + D + Y G +LRQ Sbjct: 182 LAESFKSEFEANGGTIAGYSGHEEGKASYRSELATLARGGADTLVIFDYGDGTGLSILRQ 241 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 + F+G +G+ + L G A G + + A KA ++ Sbjct: 242 SLENNFFKTFVGADGMKSEGLVKAIGAANLGGFFVSAPVGEASASLDNFNKAFKAAGENI 301 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKA 331 + +Y A A A+E+ G D+ L + L+A Sbjct: 302 DAVFATTSYDAAFLAALAIEKAGGDKT-KLAESLRA 336 >UniRef50_A1WRT6 Extracellular ligand-binding receptor n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT6_VEREI Length = 384 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 10/269 (3%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R A ++AG+I++A + A + IK+ ++ G + + GA+ A K++NA GG+ Sbjct: 8 RLASLLMAGLISVA-AMPAASQPIKLGIITDRVGAAKPYAEPVLQGAQVAAKELNASGGV 66 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G + + DD P + A K+V+ G+ +++ +S+TQ A + + G ++P Sbjct: 67 LGRPIELLVEDDQGRPDLSATAARKLVDSGVAFILSISWTSATQQAQSVTVETGTPHLAP 126 Query: 123 GATNPEL-TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 + L TQ + +T L SSQ T Y + +R+AII D G+ + +S Sbjct: 127 SNSGDTLTTQIANPNFWQTGPLASSQVSTLLAYA-RSKSFKRVAIIGDNTGLGQLMTQSF 185 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYY-PEMGQMLRQARSVG 240 + G++AA VV + + G A I R++ N D ++ G PE +LR R +G Sbjct: 186 KAGIEAAKIQVVSEEVVPRGANSADAQIQRVRASNPDAIFLTGILAPENTLILRAYRLLG 245 Query: 241 LKTQFMGPEGVGNASLSNIA-GDAAEGML 268 LK + GN S SNI A+G+L Sbjct: 246 LKAPLL-----GNFSFSNIQYASVAKGLL 269 >UniRef50_A1WEQ0 Extracellular ligand-binding receptor n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEQ0_VEREI Length = 382 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 153/334 (45%), Gaps = 6/334 (1%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D ++ V+ ++GP A G G R A ++ NA+GG+KG K+ E DD +AV Sbjct: 27 DTVRFGVLLPLTGPAALSGTSIVEGMRLAAEEANAQGGVKGKKVQLFEEDDEGLTTKAVT 86 Query: 84 VANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR---GYQHIMR 139 A ++V ++ + + G S++ A+ + + + ++S G+T+ T G R Sbjct: 87 GARRLVESNKVIGISGSYISAAAIAATKVAREFKVPVVSGGSTSVSATDANTPGDPWFFR 146 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 QG +A+ I++ +K +++A+I++ YG LA ++ + VV + Sbjct: 147 AFPGSIEQGEQSARDIVQKLKAKKVAVIYENSPYGMSLAEQMRKDIPRFGGQVVAEEIYN 206 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 E+DF +++ +++ + +Y G Q++RQA VGLKTQ +G + + L + Sbjct: 207 TDERDFYSVLTKVRARQPEAIYLAGLMDAGVQVIRQASEVGLKTQLVGSGSMMSDKLIQL 266 Query: 260 AGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 G A+EG V +M + + Q + K + + Y ++ L A R Sbjct: 267 TGHASEGFAVSSMFEPSTPNEFGQKFTRMFRERYKKEPDVFTALGYDSMHLLIEAARRAA 326 Query: 319 S-DEPLALVKDLKANGANTVIGPLNWDEKGDLKG 351 D + +K + V GP N K D KG Sbjct: 327 KLDGEQVRAELIKMSDVPLVQGPANTMVKFDAKG 360 >UniRef50_C4X495 ABC transport system periplasmic binding component n=8 Tax=Proteobacteria RepID=C4X495_KLEPN Length = 378 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 83/308 (26%), Positives = 142/308 (46%), Gaps = 18/308 (5%) Query: 7 TIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGAR--QAIKDINAKGGIKG 64 T++A ++ + +A A +IK+ VV +SG ++ +G G QAI G Sbjct: 13 TLVAALVG---ASSAQAAEIKIGVVLPLSGALSGYGQPSQKGLDIIQAITPTLKNG---- 65 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 D + + DD D +A ++V+ D + VIG + SS+T + I +D ++S Sbjct: 66 DTIKLIVIDDKSDKVEAANAMQRLVSSDKVDAVIGEVTSSNTLAMTKIADDSKTPLVSST 125 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQ 182 ATN +T R + ++ R DS QG A +K + AI+ D Y GLA++ + Sbjct: 126 ATNDRVT-RNHPYVSRVCFSDSFQGVVGANLASRDLKAKTAAIVFDSSNDYSVGLAKAFR 184 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 + G KDF A +A +K +N+D +Y YY E + Q++ +GL Sbjct: 185 TQFLKNGGTIPIEVQAPGGSKDFKAQLASVKAKNVDMIYMPIYYTEGALIAVQSKQLGLN 244 Query: 243 TQFMGPEGV-GNASLSNIAGDAAEGMLVT---MPKRYDQDPANQGIVDALKADKKDPSGP 298 +G +G+ + ++ DA G + T P +Q PA + + A +A + P+ Sbjct: 245 KPVVGGDGLAADQVFFDVGKDAVNGYMTTDYYSPNAKEQTPAGETFIKAWEAKYQQPT-- 302 Query: 299 YVWITYAA 306 + W AA Sbjct: 303 HTWGAMAA 310 >UniRef50_A9FT17 Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FT17_SORC5 Length = 398 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 85/322 (26%), Positives = 142/322 (44%), Gaps = 13/322 (4%) Query: 27 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV-AVA 85 KV ++SG +G AI +IN GG+KG + + D+ P++A V Sbjct: 46 KVGAYFSLSGEETAFGVDSKEAIDLAIDEINKAGGVKGKPIHVLYEDNKSKPEEATNKVL 105 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 I D + ++G + SS ++ + + + MI+P +TNP++T+ G + R D Sbjct: 106 QLIDRDHVLALLGEVASSRSRAGGIVANKKKVPMITPSSTNPDVTKVG-PFVFRACFTDD 164 Query: 146 SQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QG A++I+ T+ +++ + Y GLA+ +D +K +V E + Sbjct: 165 VQGQMGAQFIVNTLGKKKVGLFFASDDLYSSGLAKEFRDEVKRLGGEIVMEKSFLKKETN 224 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK-TQFMGPEGVGNASLSNIAGDA 263 F+ I LK N + +Y YY M + RQA++ G+ + F+G +G L A + Sbjct: 225 FTTYINELKSANPEMIYAPIYYTSMAPVARQAKAAGVPGSMFVGSDGWDANELLRDAAEE 284 Query: 264 AEGMLVTMPKRYDQD---PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS- 319 +G T Y D P +Q V K Y A + LA A+ R + Sbjct: 285 LDGAYFT--NHYAPDVPWPNSQAFVKKYKDRYNRTPSSIAAQAYDAARLLADAMGRAKAM 342 Query: 320 --DEPLALVKDLKA-NGANTVI 338 D+ A ++D K GA VI Sbjct: 343 TPDDIRAAIQDTKGFQGATGVI 364 >UniRef50_C0D1T2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D1T2_9CLOT Length = 407 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 157/331 (47%), Gaps = 11/331 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 I++ V ++G A++G + A + +NA GG+KG + V D D K++ VA Sbjct: 56 IRIGVAAPITGNSAEYGKGFQVATQMAAEVVNAAGGVKGRPIEMVVKDSKGDAKESADVA 115 Query: 86 NKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 + I VIG SSS ++ IY+++G++ ISP A++P+ + G ++ G Sbjct: 116 RIFCEEEDIVAVIGDFSSSSCMASAPIYQEKGLVQISPSASHPDFAKMG-DYMFGVVGRQ 174 Query: 145 SSQGPTAAKYILET-VKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 +GP AKY+ + + + + +I +G + + + + + V + GEK Sbjct: 175 DDEGPFMAKYMAKKYIGAESVGVIFMNNDWGVVTSENFKQACEESGVTVTATESFIEGEK 234 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 DF+A+I+++++ + D + Y E + +Q + G Q MG + + L + G Sbjct: 235 DFNAVISKVRQTDPDALCLITQYNEAAIISKQVKQAGWDVQIMGAGAMYSDQLIQLGGAD 294 Query: 264 AEGMLVTMPKRYDQ-DPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 EG++ P ++ DP + + A + +K+ P + A +L A + G E Sbjct: 295 VEGLIAESPFIIEESDP--KAMEFAREFEKRAGFKPNIQAASAYDTALLVA-DAIGRAEE 351 Query: 323 L--ALVKDLKANGANT--VIGPLNWDEKGDL 349 + + V+D A N + GP+ + E GD+ Sbjct: 352 VSRSAVRDALAATDNFMGITGPITFTEDGDV 382 >UniRef50_A8UX91 ABC transporter substrate-binding protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UX91_9AQUI Length = 368 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 91/356 (25%), Positives = 159/356 (44%), Gaps = 19/356 (5%) Query: 2 KRNAKTIIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 K T++ + IS ++ +K+ V+ ++GP A WG GA A++++ +G Sbjct: 3 KERLLTVLLFIFLFLISCEKQSEQTLKIGVLTPLTGPGALWGKNTLKGAELAVEELRKQG 62 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILM 119 KLV VE D P + V K++ D I ++I SS +I + ++ Sbjct: 63 A--NIKLV-VE-DSKGSPLEGVKALQKMITLDRIDFLIDDAVSSVALAIVNILTQKKLVC 118 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIA-IIHDKQQYGEGLA 178 +S G+TNP+L+ + R D+ + AKY L + R A +I+ + YGEGLA Sbjct: 119 LSTGSTNPKLSGAS-PYFFRLWNSDAEEASVIAKYALR--RGFRAAYVIYIRNDYGEGLA 175 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLK---KENIDFVYYGGYYPEMGQMLRQ 235 R ++ ++ + G +F I+++K K N F+Y GY E+ ++ Q Sbjct: 176 RKFREVFVKNGGEILLENSFAPGTSNFQYFISKIKNVHKANKSFIYIIGYPREIPSLIVQ 235 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 R ++ G ++S+ AG EG++ PK K + P Sbjct: 236 IRKSNVQIPIFGTAAFEDSSILARAGKYMEGVIYPYPKVVVTAKREHFEKVYEKKYGEKP 295 Query: 296 SGPYVWITYAAVQSLATALERTGS--DEPLALVKDLKANGANTVIGPLNWDEKGDL 349 P Y AV L A ++ G+ D+ + +L+ GA+ G +++DE GD+ Sbjct: 296 GSPAAE-AYDAVYILYKAYKKVGTDADKVREFLLNLRYEGAS---GYIDFDEFGDV 347 >UniRef50_Q89G98 ABC transporter ATP-binding protein n=2 Tax=Alphaproteobacteria RepID=Q89G98_BRAJA Length = 436 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 122/251 (48%), Gaps = 12/251 (4%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFN-GARQAIKDINAKGGIKGD-KLVGVEYDDACDP 78 A A+ +++ ++ ++GP A G + + GA+ AI +N KGGI G K+ V D P Sbjct: 28 AQAETLRIGLIYDLTGPFAAGGSVASSIGAQIAIDLVNEKGGIGGKTKIAPVAADSQSKP 87 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQP-ASDIYEDEGILMISPGATNPELTQRGYQH 136 A+ A ++++ + I + G SS P A+ + + + IL I+ + + Q+ Sbjct: 88 DVAINEAERLISQEKIDIINGVYASSHAVPLAAKVEQQKKILWITTAVSTAVFKDKNLQY 147 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQ--------RIAIIHDKQQYGEGLARSVQDGLKAA 188 + R G A ++ E K + ++A+IH+ YG G+A + + K A Sbjct: 148 VFRAQIHSDQYGQAFAGFLAEHAKAKLGMDPKEVKVALIHEDGPYGVGVAAADEAYAKEA 207 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 VV +G +A D S L+ ++K+ D + + GY P++ LRQAR GL+ + + Sbjct: 208 GIQVVLREGYSASAPDLSVLVTKIKRAKADVISHAGYNPDITLFLRQARESGLRFKMLFG 267 Query: 249 EGVGNASLSNI 259 G G + L + Sbjct: 268 AGAGYSQLDKL 278 >UniRef50_D1C6F1 Extracellular ligand-binding receptor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6F1_SPHTD Length = 457 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 9/330 (2%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 + TA + +K+ ++ +G ++ +G +N A A+++IN+ GG+ G + V DD Sbjct: 68 TPTASGEALKIGMLAPFTGDLSDFGPAFWNAAMLAVEEINSAGGVLGQPVELVRADDGTS 127 Query: 78 PKQAVAVANKIVN-DGIKYVIGHLCSSSTQP-ASDIYEDEGILMISPGATNPELTQRG-Y 134 P+Q V A ++V + + +IG S T P A + GI+ ISP +T+P LT Sbjct: 128 PQQGVEEARRLVEVERVSAIIGAAASGVTLPVAESVTGPSGIVQISPASTSPALTDANDN 187 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + RT D++QG A+ E Q ++ YG+GL+ + V+ Sbjct: 188 DFLFRTTISDAAQGVVLAQLAQEQ-GFQTACTMYTNNAYGQGLSEVFAREFERLGGQVLA 246 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM-LRQARSVGLKTQFMGPEGV-G 252 + ++A +A + N D V YPE ++ LR+A GL F+ +G Sbjct: 247 QVPHEQEQASYAAELATCTEGNPD-VLAAISYPESARVYLREAVEQGLVENFLFVDGTKS 305 Query: 253 NASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 +++ D EGM T P D + + +A + P P++ +Y AV +A Sbjct: 306 EEQFADLGWDVFEGMWGTAPGALDTEVGDAFDARYEEAYGRRPELPFLRESYDAVYVIAL 365 Query: 313 ALERTGSDEPLALVKDLK--ANGANTVIGP 340 A ++ GS +P A+ ++ AN + P Sbjct: 366 AAQKAGSTDPAAIRDAIREIANPPGETVTP 395 >UniRef50_Q2IRP0 Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IRP0_RHOP2 Length = 378 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 12/320 (3%) Query: 30 VVGAM---SGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVAN 86 V+GA +GP A + G + A+ + NA GG+ G K+ + YD+ C+P +AV VAN Sbjct: 26 VIGASIPDTGPAAAPAIWQRWGYQLALDEANAAGGVLGKKVEMLAYDNRCNPSEAVNVAN 85 Query: 87 KIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR----GYQHIMRTAG 142 K++ + ++G CSS+T + I ++ A++P++T G + R Sbjct: 86 KLIEAKVVAIVGAHCSSATLATMPLIAAAKIPLVDGIASSPKITDLSGVGGNEWTFRINP 145 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D Y+ + K +R+AI+ + +G G A + K V+ D Sbjct: 146 SDDDMMNALGIYLSGSSKIKRVAILGEDTDFGRGGAAAFAAVAKKHGLEVISTDFHPQSY 205 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DF+AL+ R+++ D + + LR A +G++ F+G G +L I Sbjct: 206 PDFTALLTRIQQSKPDAIAIFQLAGDQLNFLRNAMQLGVRIPFIGRFDPGGNNLQIIQAG 265 Query: 263 AAEGMLVTMPKRYDQDP-ANQGIVDALKADKKDPSGPYV--WITYAAVQSLATALERTGS 319 EG + Y D AN+ A + +K+ + P + W Y A++ L A++ G+ Sbjct: 266 GMEGSITAWTYSYLVDTAANKAF--AAEIEKRHKTTPVLQTWAGYDAMRLLLAAIKNAGA 323 Query: 320 DEPLALVKDLKANGANTVIG 339 +P A+ +K V+G Sbjct: 324 TDPTAIRDAIKKIEFTNVMG 343 >UniRef50_D1CEZ7 Extracellular ligand-binding receptor n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CEZ7_THET1 Length = 453 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 158/343 (46%), Gaps = 32/343 (9%) Query: 34 MSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDAC------DPKQAVAVANK 87 M+GP NG + A+++ K G G K+ DDA ++ AN+ Sbjct: 89 MTGPSRVQTVSVVNGMKLALQEHGGKAG--GYKVEFKALDDATAAAGKWTQEKETENANR 146 Query: 88 IVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ--------------RG 133 + DG +G S + + I + GI MISP T LTQ G Sbjct: 147 AIRDGATVYLGTFNSGAAAISIPILNEAGIPMISPANTAINLTQPGPPDPKLYESLYRNG 206 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 ++ R D+ QG AA + E + +++ +++D++ YG GLA+ ++ + V+ Sbjct: 207 PRNYFRVVPADNLQGTAAANWAKE-LGAKKVYVLNDQEVYGLGLAQVFREHAQKIGLEVL 265 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG-QMLRQARSVGL---KTQFMGPE 249 F+GI +++L+ ++ + D VY+GG G Q+++ R + K +FMGP+ Sbjct: 266 GFEGIDPQAGSYASLMQKIVDKGADLVYFGGLVETGGTQLVKDLRDIEPDPEKIKFMGPD 325 Query: 250 GVGNASLSNIAGDAAEGMLVTM---PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAA 306 G+ +S + AGDAAEG T+ P P + + K +P PY + A Sbjct: 326 GILESSFIDGAGDAAEGAYGTVAAAPPDKLTGPGKEFYENYKKTFGSEPE-PYAIFGHDA 384 Query: 307 VQSLATALERTGSDEPLALVKDLKANGA-NTVIGPLNWDEKGD 348 + + A+++ S +P ++K L G N +G ++D++GD Sbjct: 385 MLAALLAIDKACSKDPKDVLKALNNLGTVNGALGKWSFDKRGD 427 >UniRef50_C0CTG8 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTG8_9CLOT Length = 392 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 14/312 (4%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 +D I + +G ++G A WG++E N + +++ NA GGI G ++ YD+ D + Sbjct: 31 SDKIILGYMGPLTGESALWGEVESNTLKMLVEETNANGGIIGKQIELKIYDNRGDAVETT 90 Query: 83 AVANK-IVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ-----H 136 A K + NDG+ IG SS +++ E+ + I+ TN ++TQR + Sbjct: 91 NAARKALQNDGVVAFIGPDSSSGAIALAEVCEEYKVPHITTTGTNYKVTQREEDGSVRPY 150 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFF 195 R D G Y + + Q++AI+++ +Y G+ ++ + +A V Sbjct: 151 AFRICLSDPQLGDIMGGYAKDKLGYQKVAILYEISSEYSLGITQNFTNSFEAKGGQVTIT 210 Query: 196 DGITAGEKDFSALIARLK-KENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + G+ DF A ++++K K + D + Y E+G + +QARS+G++ F+G + Sbjct: 211 EAYKTGDVDFRAQLSKIKEKGDFDALMIPANYKEVGLIAKQARSLGIEVPFLGVDAWMMQ 270 Query: 255 SLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKAD---KKDPSGPYVWITYAAVQSL 310 L IA D + + P D D + Q +A + D G ++ Y + + Sbjct: 271 DLFEIAKDEVQDAV--FPCAMDVNDESLQEFKNAFQEKWNMDPDKGGTDAYLAYDCFELV 328 Query: 311 ATALERTGSDEP 322 A+E G +P Sbjct: 329 KYAIETAGEADP 340 >UniRef50_C2D7C9 Branched chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7C9_9ACTN Length = 434 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/372 (24%), Positives = 166/372 (44%), Gaps = 32/372 (8%) Query: 1 MKRNAKTIIAGMIALAISHTAMA----DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 + A T++ G+ +A + M+ D +KV V+G +G +AQ+G NG + +K Sbjct: 47 LSAQAATLMGGLSIIAGCNNNMSSQSSDSLKVGVMGPYTGDVAQYGLAIRNGVQLYVKQF 106 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 NA GG+ G + + D+ D +A V K+++ + +IG + S+ + + + ++ Sbjct: 107 NANGGVNGKTVDLMIEDEKGDSTEAKNVYEKMLDAKVLAIIGDVTSTPSIAVAQVSANDN 166 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 + +IS AT P T G+ + R D QG AK+ + I + Y G Sbjct: 167 MPLISASATAPAFTSFGH-NAFRATMTDDFQGKVMAKFAQKQGYKTVGTIYNSGGDYESG 225 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 + + + + NV AG+ DF+A + + + D V+ YY + G+++ QA Sbjct: 226 INKIFVEECQQLGINVTSQQAYAAGDVDFNAQLTAIFATSPDAVFCPNYYQDSGKIVTQA 285 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAA-------EGMLVTMPKRYDQDPANQGIVDALK 289 R +G K F+G +G N + GD EG P + D N + D +K Sbjct: 286 RQLGYKGVFLGADGWANM----VDGDDKYASPEDLEGCYYNCPFIVEND--NDKVKDFVK 339 Query: 290 ADK----KDPSGPYVWITYAAVQSLATALE--------RTGSDE-PLALVKDLKANGANT 336 A K+PS + + Y A + AL+ + G++E AL+ + + + Sbjct: 340 AYHDEYGKNPSN-FCALGYDAAMMMCAALKTVDDKGDVKPGTEEYKQALIDAIAQDKVDG 398 Query: 337 VIGPLNWDEKGD 348 V G + ++ GD Sbjct: 399 VTGSIAFEGTGD 410 >UniRef50_B0PGR3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGR3_9FIRM Length = 411 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 95/335 (28%), Positives = 147/335 (43%), Gaps = 8/335 (2%) Query: 20 TAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 TA D +I + A++G G G A+++INA GG+ G KLV DD Sbjct: 56 TAATDGEILFGLSCALTGNFPLAGQRTREGIDLALEEINANGGVLGKKLVYTIEDDQNTQ 115 Query: 79 KQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 AV V KI+ + VIG S + +++Y + G+ ++ G T+P+L + ++ Sbjct: 116 TTAVNVVTKILTQDVAAVIGPHTSGNAMATNELYRNAGVPFLT-GGTSPKLEEAQNPYMF 174 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R D+ G AAKY +ET+ ++I I + +G G + L+ A V G Sbjct: 175 RCRPADTINGQVAAKYAIETLGAKKIGISFNNNDFGTGGRDVIIAYLEEAGVPYVAV-GH 233 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG-VGNASLS 257 AG+KD + I +LK E +D + E+ RQ +G+ + G V + L+ Sbjct: 234 NAGDKDLTGQIMQLKGEGVDCIISWTDDAEVALTARQLYELGVDVPVIASAGVVMDQVLN 293 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP-YVWITYAAVQSLATALER 316 + + EG D A DK + Y Y+A LA A+ER Sbjct: 294 LLEPEYVEGWYSVTDFVSTSDEAVTAEFTKKFTDKYGYAPELYAATYYSATYVLADAIER 353 Query: 317 TGSDEPLALVKDLKANGANTVI--GPLNWDEKGDL 349 GS +P A V+D A V+ G DE G+L Sbjct: 354 AGSADPQA-VRDALAATDGLVLPEGSYKCDENGNL 387 >UniRef50_A0LGK7 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGK7_SYNFM Length = 375 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 12/262 (4%) Query: 11 GMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGV 70 G +ALA +D IK+ + M+G +A +G+ME+ G Q +D+ + + G K+ V Sbjct: 20 GSLALA------SDTIKIGLYLPMTGGVAAYGEMEWAGI-QIARDMEPQ--VLGKKIDLV 70 Query: 71 EYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL 129 D D +A +V + + +IG S +T + I E GI +SP AT+ L Sbjct: 71 LLDTKSDKIEATNAMTLLVEKEKVAGIIGEAISGNTMAGNRISEAAGIPSVSPSATSV-L 129 Query: 130 TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAA 188 +G + R +D QG AA++ + +K + A+I D Q Y GLA+ + Sbjct: 130 VNQGKKFAFRACFIDPLQGEVAARFAVNNLKAKSAAVIIDNAQDYCVGLAKFFETEFVKL 189 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 V+ I G++DFSA ++ ++ D +Y YY E + +QAR +G+ + Sbjct: 190 GGKVLSKTYIQTGDQDFSAQLSSVQAVKPDIIYAPNYYTEDALLAKQARDLGIVCPILTG 249 Query: 249 EGVGNASLSNIAGDAAEGMLVT 270 +G +L + G A E M T Sbjct: 250 DGAQADTLIQVGGKAVEDMYFT 271 >UniRef50_A9BJ64 Extracellular ligand-binding receptor n=2 Tax=Thermotogaceae RepID=A9BJ64_PETMO Length = 376 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 153/328 (46%), Gaps = 12/328 (3%) Query: 6 KTIIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIK---DINAKGG 61 KT++ + + ++ T + IK+ + ++GP++ +G M +G A K +N G Sbjct: 3 KTVVLVFLVVIMTFTLFGQEVIKIGMNFELTGPVSGYGQMSRDGVMLANKLKPTVNIGG- 61 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 K K+ V D+ D ++ +++ ++ + VIG SS+ A+ I E+ I M+ Sbjct: 62 -KEIKVEVVAVDNKSDKAESANAIRRLIDHEKVVAVIGPATSSAALAAASIAEERQIPMV 120 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLAR 179 ATNP L + +++ RT D+ QG A + E + Q +AI+ D Q Y GLA Sbjct: 121 VNTATNP-LVAQNKKYVFRTCFEDTLQGALLATFAWEELGAQNVAIMVDVAQDYVVGLAN 179 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + F + T G++DF+A + +N D ++ GYY E+ + +QAR + Sbjct: 180 YFEKAFEQFGGTY-FTEFYTTGDQDFTAQLTDALSKNPDAIFMPGYYAEIALISKQARDL 238 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD--PANQGIVDALKADKKDPSG 297 G +G L I G+ EG+ T D + PA + V+A + + + Sbjct: 239 GFTGPMFAGDGADAPELIQIGGEYVEGLSYTTYFHEDAELSPATKPFVEAYQEEYNRRAD 298 Query: 298 PYVWITYAAVQSLATALERTGSDEPLAL 325 + + Y A + A+E S +P+ + Sbjct: 299 AFGALAYDAYMVIVNAIESAQSTDPVKI 326 >UniRef50_B8G0I4 Extracellular ligand-binding receptor n=18 Tax=Bacteria RepID=B8G0I4_DESHD Length = 396 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 137/269 (50%), Gaps = 13/269 (4%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY-DDACDPKQAVAV 84 K+ G ++G A +G+ NGA+ A+ +INA GGI+ + ++Y DD D ++AV Sbjct: 47 FKIGGTGPLTGGAAIYGNAAKNGAQIAVDEINALGGIQFE----LKYEDDEHDAEKAVNA 102 Query: 85 ANKIVNDGIKYVIGHLCSS-STQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 NK+ + G++ +G + S+ +++++ D I ++P A+ P + + G +I + Sbjct: 103 YNKLKDWGVQMSLGSVTSTPGVATSAEMFSDR-IFALTPSASAPAVIE-GKDNIYQMCFS 160 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITA-G 201 D +QG +A+YI + +IAII+ Y +G+ + K N +V T Sbjct: 161 DPNQGSASAQYIADKKLGTKIAIIYKNDDVYSKGIYNTFVSKAKELNLEIVSTTTFTEDS 220 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV-GNASLSNIA 260 + DFS +A KK D ++ YY + +QA+S+ ++ G +G+ G +L N Sbjct: 221 QTDFSVQLADAKKNGADLIFLPMYYTPASLIFQQAKSMDYSPKYFGVDGMDGILTLENFD 280 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALK 289 AEG+++ P + D ++ V+ +K Sbjct: 281 KSLAEGVMLLTP--FSADATDERTVNFVK 307 >UniRef50_B0TAA3 Branched-chain amino acid abc transporter, substrate binding protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAA3_HELMI Length = 388 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 7/257 (2%) Query: 9 IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLV 68 I M ALA + + I +AV +SGP+ WG F G + A+ + N++GGI+G + Sbjct: 28 IKTMAALATAKMG-SSPIVLAVAVELSGPVGPWGQAAFKGIQMAVDEANSQGGIEGHPVQ 86 Query: 69 GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPE 128 + D A D + + G+ VIG + S + ++ ++ + P Sbjct: 87 TISVD-ASDGTGLAGFSEQAQKKGVAAVIGPVTPSKAEALVKAGLSVPLISLASAPSVPS 145 Query: 129 LTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAA 188 L + +++ + D QG AA Y + ++ +K Y + LA+S ++ +A Sbjct: 146 LGDK----VLQGSYDDRQQGTAAAHYAARVWSKKAALVVEEKSAYAQSLAKSFREAYEAK 201 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 +V G++DFSAL+ +L + + + +Y GY E L+QAR GL+T +G Sbjct: 202 GGKIVKSLTYQRGQQDFSALLKQLTQADPEVIYLPGYAKEGKAFLQQARQKGLQTPIIGG 261 Query: 249 EGVGNASLSNIAGDAAE 265 +G+ + + IAG E Sbjct: 262 DGLESVA-KEIAGKGKE 277 >UniRef50_D1SZL8 Extracellular ligand-binding receptor n=2 Tax=Comamonadaceae RepID=D1SZL8_9BURK Length = 387 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 21/352 (5%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY---DDACDPKQ 80 D +K+ V +SGP+A G NG + A+ ++N G + K V +E DD D Sbjct: 34 DTVKIGVAQPLSGPLAALGQDMLNGVKLAVDELNQSGFMVDGKRVTLEVVAQDDRADAAT 93 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 VA ++V G+ V+GHL S + A+ IY +GI ++ +T+P T+ G+ R Sbjct: 94 GKTVAQQLVESGVVAVVGHLNSGVSIEAAPIYAAKGIPQLAI-STHPHFTELGFPGTFRL 152 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 D+ Q + + A++ D YG+GLA + V + Sbjct: 153 VANDALQARAMGSFAATQLSASSYAVLDDGTPYGKGLADGAAAQIAQDKRKVSVRESFDD 212 Query: 201 GEKDFSALIARLKKENIDFVYYG-GYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 DF AL +L++E +D + + + + ++ + +G + + + + Sbjct: 213 KTTDFKALAGKLQQERVDVIVTTLNDFQVLALIDALVQANYTRVSILGGDTIKTTDM--L 270 Query: 260 AGD-AAEGMLVTMPKRYDQD-PANQGIVDAL-KADKKDPS--GPYVWITYAAVQSLATAL 314 GD + T P ++ A + +D +A K+ P+ G Y +Y A L+ A+ Sbjct: 271 KGDRKLAAIYATSPVLEAREFIAGRQFLDRYDRAFKRAPAYGGHY---SYDATYVLSAAI 327 Query: 315 ERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGDLKGFDFGVF-----QWH 360 ++ S +P + K L A NG V G + WD+KG+ + GV+ QW Sbjct: 328 QQAKSADPREITKALHAINGYAPVTGTMKWDDKGEQRYGAVGVYGMRAGQWE 379 >UniRef50_UPI0000383226 COG0683: ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383226 Length = 99 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 42/89 (47%), Positives = 59/89 (66%) Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIY 112 + +IN GG+ G KL V DDA DPKQA AVA + G+++VIGHL S ++ AS +Y Sbjct: 1 MTEINRAGGVMGRKLQLVAQDDAADPKQAAAVARRFAEGGVRFVIGHLTSGASAAASPVY 60 Query: 113 EDEGILMISPGATNPELTQRGYQHIMRTA 141 E+ GI+ ++PGAT LT+RG + + R A Sbjct: 61 EEAGIVSVTPGATWAPLTRRGARLLFRLA 89 >UniRef50_Q9AMZ3 Bll2018 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q9AMZ3_BRAJA Length = 220 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 50/113 (44%), Positives = 72/113 (63%), Gaps = 2/113 (1%) Query: 2 KRNAKTIIAGMIALA-ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 KR+A A ++ A ++ +A +IK+AV G M+G A +G +GA A++ +NA G Sbjct: 92 KRHASLAPAALLFCALVAPSARGSEIKIAVAGPMTGSSAAFGAQMRDGAAAAVEVLNASG 151 Query: 61 GIKGD-KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIY 112 + + K + DDACDP+QAVAVANK+ + I V+GH CSSS+ PASDIY Sbjct: 152 QLPDNAKTILSVADDACDPRQAVAVANKLTTERILLVVGHFCSSSSIPASDIY 204 >UniRef50_A8UVG6 Putative branched-chain amino acid transporter substrate-binding protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVG6_9AQUI Length = 394 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 112/221 (50%), Gaps = 6/221 (2%) Query: 33 AMSGPIAQWGDMEFNGARQAIKDINAKGGIK-GDKLVGVE---YDDACDPKQAVAVANKI 88 + +G A+ G++ G + +N++GG+K GDK VE YDD DP+ + K+ Sbjct: 31 SFTGKYAKEGELLKKGYELWKETVNSRGGVKVGDKRYRVEIVYYDDQSDPRTTAKLVEKL 90 Query: 89 VND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQ 147 + + GI++++G SS ++ + E LM+ G + ++ ++GY+H+ + S Sbjct: 91 ITEEGIRFILGPYGSSQVFASAGVVEKHRALMVQGGGASSKIYKQGYKHVFGVFNVASDY 150 Query: 148 GPTAAKYILE-TVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFS 206 G + + KP+ +AII++K + E AR K VV F+ G +D S Sbjct: 151 GKNLIELAVSLKPKPKSVAIIYEKDIFSEDAARGALKTAKRHGLRVVLFESYPKGTQDLS 210 Query: 207 ALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG 247 +L+ +L+ + + V G++ + +++Q + + +F+G Sbjct: 211 SLMLKLRLKKPEVVIGAGHFKDSVLVVKQLKQFRINPKFLG 251 >UniRef50_A1WPI8 Extracellular ligand-binding receptor n=3 Tax=Proteobacteria RepID=A1WPI8_VEREI Length = 410 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 14/251 (5%) Query: 9 IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK--GD- 65 +AGM ++H A + V V A+SG A +G E A++++NA GGI GD Sbjct: 17 LAGMTVALVAHAA-DKTLTVGVSDALSGGGAVYGVPELRAIELAVEEVNAAGGIPVGGDA 75 Query: 66 -KLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 +L + YDD DP +A VA K+++ DG+K ++G+ CS+S + E LM+ Sbjct: 76 YRLKTISYDDKADPTEATNVARKLLDRDGVKVLLGYCCSASGGAVASFMGREDALMLVGT 135 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILET-VKPQRIAIIHDK---QQYGEGLAR 179 A ++T G ++ RT G A +Y+ + V+ I + D QY E L + Sbjct: 136 AGARDITAAGNPNVFRTRPPGDYTGAAAGRYLYDKGVRTLGILGVRDVALFTQYREALIK 195 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + A VV + ++D + + +LK+ + D V+ GY + RQ + + Sbjct: 196 RFEQ----AGGKVVALETFGGHDRDMTPQLTKLKRLDPDAVFISGYVEQAAFAYRQFKEI 251 Query: 240 GLKTQFMGPEG 250 G+K G G Sbjct: 252 GMKMPRYGFSG 262 >UniRef50_A7IFS3 Extracellular ligand-binding receptor n=3 Tax=Proteobacteria RepID=A7IFS3_XANP2 Length = 408 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 10/251 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K + SG +A GD F G A+++ NA GGI G K+ ++ DA DP QAV A Sbjct: 30 VKFGALYPFSGGLALLGDESFRGFELAVEERNAAGGIDGKKIEFIK-GDAVDPNQAVGEA 88 Query: 86 NKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 ++ + D + + G SS + A+ + E G+ GA + +T+RG++++ RT Sbjct: 89 RRLTSVDKVSAIFGTYSSSLSLAATQVTELAGVPYFELGAVSDPITERGFKYVFRTNATA 148 Query: 145 SSQGPTAAKYILETVKPQ--------RIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 ++E V P ++ IIH+ YG+ ++ + K NVV Sbjct: 149 RDFANRMVDSVIEAVAPALGVKAADLKVGIIHEDSLYGQTVSGYQKTRAKEKGLNVVEVL 208 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 +A D + +I RLK +D V Y + RQ + K + + G G ++ Sbjct: 209 PYSAKSVDLTPVILRLKSAGVDVVLQTSYQNDTVLFFRQMKDQAYKPKAVMGAGGGYSTR 268 Query: 257 SNIAGDAAEGM 267 + AE M Sbjct: 269 DTMTAVGAENM 279 >UniRef50_A5CZP1 ABC-type branched-chain amino acid transport systems, periplasmic component n=2 Tax=Pelotomaculum thermopropionicum SI RepID=A5CZP1_PELTS Length = 388 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 16/336 (4%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A +IK+ VV +SG A +G G A IN GGI G K+ V D D +A+ Sbjct: 40 AGEIKIGVVATLSGDGADYGVSIKRGLETARDRINGAGGINGRKISLVIEDSHGDKNEAI 99 Query: 83 AVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 K++N D + +IG S A + + G++++ T + + G ++ R + Sbjct: 100 NAVQKLINRDRVLAIIGPTNSGEMFAAGPVADKAGVVIMGTSNTARGIGEIG-PYVFRNS 158 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITA 200 + + P + E + R+A+++ + A++ ++ L+ +V Sbjct: 159 LPEDNIIPITVRKSKEKLGFNRVALLYSSNNDWAVSSAKTFEEALREQGVAIVETQTFAD 218 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G+ +F A + R+ + + Y E +L QAR G+ MG G + L IA Sbjct: 219 GDTNFQAQLTRVAAAKPEALAVSALYKEAALLLIQARQQGINLPVMGGNGFNDPELIKIA 278 Query: 261 GDAAEGMLVTMPKRYDQ-DPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 G+AAEG LV P + DPA + V+ K + +Y A+ +A AL+ G+ Sbjct: 279 GEAAEGALVGSPWYAGKDDPAVRDFVEEYKKRYHTVPNQFAAQSYDALGIMAEALKTEGA 338 Query: 320 -------DEPLALVKDLKANGANTVIGPLNWDEKGD 348 + LA +KD + V G ++DE G+ Sbjct: 339 AADRARFRDALAAIKDYRG-----VTGRFSFDENGN 369 >UniRef50_C5EHL3 Extracellular ligand-binding receptor n=4 Tax=Clostridiales RepID=C5EHL3_9FIRM Length = 386 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 90/355 (25%), Positives = 151/355 (42%), Gaps = 16/355 (4%) Query: 5 AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 A ++AG +A A IK+ V +G G E G R A K+++ I G Sbjct: 12 AACLVAGSLA-GCGKKAEEKVIKIGVFEPTTGENGGGGFQEVLGIRYA-KEMHPTVTING 69 Query: 65 D--KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 + K+ VE D+ D +AV A K+V++ + V+G S + A I+ D I I Sbjct: 70 EEYKVELVEVDNKSDKTEAVNAAQKLVSEKVSVVLGSYGSGVSIAAGQIFADAKIPAIGC 129 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 TNP++T+ G R +D QG A Y + I Y GL + Sbjct: 130 SCTNPQVTE-GNDFYFRVCFIDPFQGTVMANYAFQNGAKSAAVITQLGDDYSSGLGSFFK 188 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 D +V + + DF A++ +K N D ++ +++QAR +G+ Sbjct: 189 DAFAKLGGEIVSEEQFQTNQTDFKAILTNIKAANPDIIFAPSSITTAPLIIKQARELGIT 248 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ-DPAN-------QGIVDALKADKKD 294 + N+++ AG AEG V + +D+ +PAN +G + L +K++ Sbjct: 249 ATIAAGDTWENSTIIENAGKDAEG--VVLSTFFDEAEPANDEAAAFIKGFKEYLVKNKQE 306 Query: 295 PSGPYVW-ITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 P V + Y + + A+E S + A+ LK + V G + ++E GD Sbjct: 307 DIIPAVSALGYDSYLAAIKAIETANSTDTTAIRDALKGVQIDGVTGSITFNETGD 361 >UniRef50_Q21SP4 Extracellular ligand-binding receptor n=5 Tax=Comamonadaceae RepID=Q21SP4_RHOFD Length = 392 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 11/330 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAM----ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 MK A ++A + + TA +I + + +SGP+A +G G A+ +I Sbjct: 1 MKIKATVVLAALTLASTLATAQQGVSPTEITLGSIQDLSGPLAGFGKQARLGMLLAVDEI 60 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDE 115 N +GG+ G KL + D DPK+AV A K+VN D I ++GH+ ++ A + D+ Sbjct: 61 NEQGGVSGRKLKLLVEDSGYDPKKAVLAAQKLVNQDKIFMMVGHIGTAQNMAAMPVQFDK 120 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 ++ P E+ + ++ A Q A +++ +++ I+ +G Sbjct: 121 NVINFFPITAAREMYEPFHKLKYSFAATYYDQMRRAVPQMVKDKGIKKVCTIYQDDDFGL 180 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 + R + GLK N + G DFS+ +A++K + V G E + + Sbjct: 181 EVLRGGEAGLKTINMDFTEKTSFKRGATDFSSQVAKMKAAACEMVVLGTIIRETIGTIGE 240 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTM----PKRYDQDPANQGIVDALKAD 291 +R G F+G + + G A +G+ TM P +Q P + + K Sbjct: 241 SRKTGFNPIFLGSSAAYTDLIHKLGGKAMDGLYATMTVQNPYTDEQSPQIRFWANKYKTK 300 Query: 292 -KKDPSGPYVWITYAAVQSLATALERTGSD 320 +DPS V+ Y + + A + G + Sbjct: 301 FNEDPSVFSVY-GYLIINTFANVASKAGKN 329 >UniRef50_B3QJ86 Extracellular ligand-binding receptor n=3 Tax=Bradyrhizobiaceae RepID=B3QJ86_RHOPT Length = 401 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 12/222 (5%) Query: 34 MSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DG 92 +SGP+ WG NG + AI IN GGI G K+ V DD DPK+AV + K++ D Sbjct: 44 LSGPLKAWGVPATNGMKLAIAQINDAGGINGRKIRLVNEDDGYDPKKAVLITQKLIELDK 103 Query: 93 IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT--------QRGYQHIMRTAGLD 144 + ++ + S++T + + G+L + P T E T + + M + D Sbjct: 104 VFAIVSAMGSATTLAPMPLVQSAGLLHLFP-ITAAEFTFKMDPVKPEDRLKFNMFSPYYD 162 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 + + KY++E KP++ I++ + G+ + D LKA N G D Sbjct: 163 TMR--LGIKYVIENTKPKKPCIVYQDDEMGKNFTDAYTDQLKAMNIPSATMVSFKRGATD 220 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 246 F++ +AR+K + D V G E + A+ +G K F+ Sbjct: 221 FNSQVARMKADGCDMVALGSVVRESVGITTAAQKLGWKPTFV 262 >UniRef50_A7IFL6 Extracellular ligand-binding receptor n=2 Tax=Xanthobacter autotrophicus Py2 RepID=A7IFL6_XANP2 Length = 406 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 10/255 (3%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK--GDKLVGVEYDDACDPKQ 80 ADD+ V V+ +SGP AQ+G G A + INA GGIK G + + D P Sbjct: 33 ADDVVVGVIQPLSGPNAQFGIGAQRGTELAAEMINAAGGIKSLGGAKIKLVAADVPTPNT 92 Query: 81 AVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A A ++++ +G+ V+G SS+T AS++ E GI +++ A ++T RGYQ++ + Sbjct: 93 AAATTQRLISQNGVSAVVGAFVSSTTLAASEVTERAGIPLVT-FAFADQITGRGYQYVFQ 151 Query: 140 TAGLDSSQGPTAAKYILETVKP-----QRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + + G Y E K +IAI+++ YG A+ ++D K A +V Sbjct: 152 VSPKGTVFGAAQFDYATEIAKAAGEKIDKIAILYEDTAYGTAQAKGLRDAAKKAGVEIVL 211 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM-GPEGVGN 253 + G D S L+ +L+ + Y + ++R R + + G G Sbjct: 212 DEAYPLGITDVSPLVNKLRASGAQMAFPVSYLNDSLLIIRALRQQQIDIPVIGGAAGYII 271 Query: 254 ASLSNIAGDAAEGML 268 GD AEG+L Sbjct: 272 PDFKKGLGDYAEGVL 286 >UniRef50_C0QII0 LivK2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QII0_DESAH Length = 371 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 87/335 (25%), Positives = 146/335 (43%), Gaps = 12/335 (3%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 A + V V ++G +A +G+ A ++INA GGI GD L V D+ K + Sbjct: 21 FAGTVSVGAVTPLTGKLAVYGEGFQQAMLLAAEEINASGGINGDTLEIVFEDNNSTSKGS 80 Query: 82 VAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 V+ K++ D + V G SS+ I + ++I + E+T+ G ++ R Sbjct: 81 VSAIRKLITIDKLTLVFGPAASSNFLAICPIAQKNKTILIGAESAAAEITKCG-SYVFRV 139 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 D QG T + ++ + + + + +G GLA + A+ ++ Sbjct: 140 FPSDLLQG-TGVSELASSLGYKEVVLTYVNNDWGVGLAEVFKRQFLASGGKIIDELAHAE 198 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G+ D+ + I R+K+ N V Y E +L+QA GL TQ++ + L +A Sbjct: 199 GKTDYRSEILRIKRHNPKVVVNLTYIKEGATILKQAYETGLNTQWLMGSASKSPKLVALA 258 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALK---ADKKDP-SGPYVWITYAAVQSLATALER 316 G AEG++ T P + P Q A + + KK P G Y Y V+ A AL Sbjct: 259 GKTAEGIIGTYPTFSQESPEYQAFKTAWEKKYSGKKTPIFGEY---NYDMVKLTALALRD 315 Query: 317 TGSDEPLALVKDLK--ANGANTVIGPLNWDEKGDL 349 GS + + + L + G G ++DE GD+ Sbjct: 316 AGSVDADTVRESLLKVSQGYMGTTGDKSFDENGDV 350 >UniRef50_A7BUD9 Extracellular ligand-binding receptor n=1 Tax=Beggiatoa sp. PS RepID=A7BUD9_9GAMM Length = 445 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 50/366 (13%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI-----KGDKLVGVEYDDACDP 78 ++I + V +++ P+ + D+ A K+IN +GG+ + + + +E D+ Sbjct: 45 EEIVIGVAWSLTHPLLKGVDL-------ATKEINNRGGVNIADHEPPRTIRIEKIDSSIT 97 Query: 79 KQAVAVANKIVNDGI--KY--------VIGHLCSSSTQPASDIYEDEGILMISPGATNPE 128 + + +I I K+ VIGH SS PAS Y+ GI+ ++P +TN Sbjct: 98 AKTSPLQQRISARNIARKFASMLEVVAVIGHRYSSIAIPASITYQYNGIIFLAPSSTNLM 157 Query: 129 LTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAA 188 LT + ++ R + A Y + Q++ +++D+ YGE LA S + Sbjct: 158 LTSHDFDYVFRMLPNNEEMAKQLAAYCKYYQRYQKMIVLNDRGDYGEELADSFINSAVEY 217 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDF--VYYGGYYPEMGQMLRQARSVGL----- 241 + + DF+ LIA LK D ++ GQ+++Q+R + L Sbjct: 218 GIKIKYRRTFFVQRSDFANLIADLKNRTSDVNAIFIATSANTGGQIIKQSRRMELLGIDE 277 Query: 242 -----KTQFMGPEGVGNA-SLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 K F+G + + NA L +A + AEG++V P Y+++ IV K K+ Sbjct: 278 KGEEIKMPFIGGDSLANAEELWKVAKNTAEGLVV--PTVYNEELK---IVQQFKKHFKEE 332 Query: 296 SGPY--------VWITYAAVQSLATALERTGSDEPLALVKDLK--ANGANTVIGPLNWDE 345 + V + Y AV+ L A+++ S P+ + L +NG V G + + Sbjct: 333 YREFSDLEPDQSVALGYDAVKLLVYAMDKADSIVPIEVATQLHYMSNGWKGVTGIHKYQQ 392 Query: 346 KGDLKG 351 G+L G Sbjct: 393 TGELDG 398 >UniRef50_B1Y595 Extracellular ligand-binding receptor n=10 Tax=Proteobacteria RepID=B1Y595_LEPCP Length = 380 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 99/346 (28%), Positives = 154/346 (44%), Gaps = 27/346 (7%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 I++A V +SG A G +G A+K+INA GGI G K+V D P A +A Sbjct: 28 IRIANVVELSGSGASPGTYFRDGVELAVKEINAAGGILGRKIVTTTADTQTQPGIAKGLA 87 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPE---LTQRGYQHIMRTAG 142 K V+DG V G + S S + E P T E +TQ+G ++ RTA Sbjct: 88 AKAVDDGAFAVFGPVYSGSIM----VSMAETRRAEVPNFTGGEAAAITQQGNPYVFRTAF 143 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 SS P A+YI K + + +I+ +G+G ++ L +V G+ Sbjct: 144 GQSSSFPKLARYI--NTKARTLVVIYQNNDFGKGGRDTLTKLLDGGPTRIVGEMATDQGQ 201 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DFSA + + ++ N D V+ E + L++ R G +G + + + +AG+ Sbjct: 202 IDFSAAVIKARQANADAVFVYLTEEESARALKELRKQGWSKPIIGETVLVSQKVIELAGE 261 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWI-------TYAAVQSLATALE 315 AA G VT D N + LK K Y +I +Y V +L A+E Sbjct: 262 AANG--VTGHVGLTVDAPNP---EMLKFKAKFYQA-YKYIPDHNGIKSYMGVYTLKAAIE 315 Query: 316 RTGSDEPLALVK-----DLKANGANTVIGPLNWDEKGDLKGFDFGV 356 + G + +A+ K ++KA VI +++D+KGDL F V Sbjct: 316 KAGKLDRVAVAKAMKGLEVKAAKYPGVIMDVSFDDKGDLDRESFLV 361 >UniRef50_C5ET85 Extracellular ligand-binding receptor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET85_9FIRM Length = 399 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 7/339 (2%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK-LVGVEYDD 74 A TA + IKV V ++GP+A G A ++INA GG+ G + L V DD Sbjct: 39 AAQSTATGEPIKVGVSNMVTGPMAAGGIRMKQAITMAFEEINANGGVLGGRPLEMVLVDD 98 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 P AV NKI+ + + IG S ++Y G+ I+ AT+P+L + Sbjct: 99 TGTPTGAVNAVNKILGENVSVSIGPHTSPMASATQELYRKAGVPFIT-AATSPKLLEAEN 157 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + R + D + GP ++ + ++I ++D YG A A N + Sbjct: 158 PYFFRISVSDGAVGPAMVEFAKDKFGAKKIGALYDTDDYGVA-ADGATKQYCADNGIEYY 216 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL-KTQFMGPEGVGN 253 +G T+G+KD ++ ++++K D V+ + E ++RQ +G+ +GP + Sbjct: 217 SEGFTSGDKDLTSQLSKIKGWGPDVVFDFSHDAEAALIVRQLDELGMGDIPHVGPNALAQ 276 Query: 254 ASLSNIA-GDAAEGMLVTMPKRYDQ-DPANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 + ++ EG + D+ + A + +DA A + Y + Y A A Sbjct: 277 SQTYDLCDAKQLEGTYASTDFYADESNAAMKKFLDAFHARWGEDVERYAAMYYTAAYLAA 336 Query: 312 TALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDL 349 A++R GSD+P + K L + + V G LN + +G++ Sbjct: 337 DAIDRAGSDKPEDIRKALSETKDFDAVFGKLNCNAQGEM 375 >UniRef50_Q12H77 Extracellular ligand-binding receptor n=8 Tax=Comamonadaceae RepID=Q12H77_POLSJ Length = 417 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 10/264 (3%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + +K+ V+G +G + +G NG +QA+ +INA GG G KL V DD +P + Sbjct: 45 NTLKIGVIGPFTGASSDFGVPMLNGIQQAVDEINAVGGYLGRKLEIVRKDDKANPDVGLK 104 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR---GYQHIMRT 140 ++ ++V + + +G + + ++Y+ + +I P AT LT + +I RT Sbjct: 105 MSQELVAEKVSVTLGFCNTGVAAKSLEVYQANKLPLIIPCATGSPLTAKYPAAESYIFRT 164 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 + DS Q P + IL+ R+A+ D YGE + V+ L A N V+ Sbjct: 165 SASDSIQAPFVVEDILKR-GWNRVAVFADTTGYGEAGLQDVEKALAAKNLKPVYVARFAL 223 Query: 201 GEKDFSALI--ARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 G KD + A+ N+ F Y G PE + +++ K +G + + Sbjct: 224 GVKDLGEELKAAKAAGANVVFSYTVG--PENAVIAHGRQALNWKVPQVGAWTLSFPFFID 281 Query: 259 IAGDAAEGMLVTMPKRYDQDPANQ 282 DAA+G L M + + +P+N+ Sbjct: 282 GGKDAADGAL--MAQTFIAEPSNE 303 >UniRef50_B0TAM9 Branched-chain amino acid abc transporter, amino acid-binding protein n=2 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAM9_HELMI Length = 414 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 20/343 (5%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ + SG A WG AR A+ +INA GGI G K+ V D + AV + Sbjct: 53 VKIGALVDKSGKGADWGKKNEIAARIAVDEINAAGGINGAKIELVVKDTGGKNEDAVNLT 112 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 + ++G+ ++G S + A G+ +ISP + ++++ R + D Sbjct: 113 RTLADEGVAAIVGPFFSGECEVAFPQANKLGVPIISPSSAKAGVSEKNRPWAFRNSMTDD 172 Query: 146 SQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARS-VQDGLKAANANVV---FFDGITA 200 A ++ + +A+IHD K + + + + + KAA N+V + Sbjct: 173 KLLRDATPLFVKAYNVKTVAVIHDEKDAWSKAVGSTDLPREFKAAGVNIVNEGNYLTYKT 232 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 GE +F+A++ ++K N D + +GG Y E ++ GLK +G G+ +A+L Sbjct: 233 GETNFAAIVTQIKTMNPDAIAFGGLYNEAASFAKEMERQGLKKPVLGGVGMYSAALIQQG 292 Query: 261 GDAAEGMLVTMP-KRYDQDPANQGIVDALK--ADKKDPS----GPY---VWITYAAVQSL 310 G A E + T Y +P + VD K A K P+ G + + T+ + ++ Sbjct: 293 GKAVEDFVATSCFNVYADNPRVKSFVDKFKPEAAKITPADDLPGSFEAQFYETFYMISNV 352 Query: 311 ATALERTGSDEPLALVKDLKANGANT-----VIGPLNWDEKGD 348 + GS L +K AN + G + D+KGD Sbjct: 353 LKKANKNGSTPVADLRNTIKDGLANLKDFEGLTGKTSIDDKGD 395 >UniRef50_B8DRY9 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRY9_DESVM Length = 394 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/339 (21%), Positives = 155/339 (45%), Gaps = 4/339 (1%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 TA+A D+ ++V ++G A++G++ A ++INAKGG+KG KLV D P+ Sbjct: 19 TALAADLSLSVPLPLTGGQAKFGEIIKKSMEIAAEEINAKGGVKGGKLVLRFEDSQGKPE 78 Query: 80 QAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 A ++A KI++ + G S+ + + + E+ + + E+TQ+ Y+++ Sbjct: 79 IARSIAEKIIDVQKQPLLFGEYTSACAKAVAAVAEERKTPYVVVASAADEITQQNYKYVY 138 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R ++ ++ + VKP+ + I+++ +G A + + A V+ + Sbjct: 139 RINPTNAYYASGLLSFMDKVVKPKTMVILYESSDFGTSGAEEMAKSAEKAGIKVLMKEKY 198 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM--GPEGVGNASL 256 G DF +++++K +N D +Y Y + ++RQ + + + + G G Sbjct: 199 EKGAVDFKPVLSQVKAQNPDVIYMVSYVMDAALLMRQIKELRIDARLFAGGAAGFAIPEF 258 Query: 257 SNIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 + A DAAE ++ T+ P + + KA D + + Y++V + A+E Sbjct: 259 IDNAKDAAEFVVTATLWSPQVSYPGAREFAEKYKAAHGDYPSYHGALAYSSVYVVKDAVE 318 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 R + + +K T GP+ ++ + + +F Sbjct: 319 RAKALTTEDINAAMKGVDMMTAFGPVKFESRDGYQNQNF 357 >UniRef50_D2L0U6 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0U6_9DELT Length = 418 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 147/340 (43%), Gaps = 17/340 (5%) Query: 15 LAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK---GDKLVGV 70 LA+S AD IK+ V +SGP A G A+++INA GGIK G KL V Sbjct: 25 LAVSPAVAADKTIKIGNVEPLSGPSASVGVQGKQAREMAVEEINAAGGIKSLGGAKLELV 84 Query: 71 EYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL 129 D DP V +++N + + + G S+ T PA+ + E GI + P A + Sbjct: 85 YADSKSDPTVGVTETERLINTEKVNLMTGCWNSAVTYPATQVAERYGIPFVVPVAVRDTI 144 Query: 130 TQRGYQHIMRTAGLDSSQGPTAAKYILET-----VKPQRIAIIHDKQQYGEGLARSVQDG 184 T+RG++++ R A DS +++ + VK + IA + + +G G A ++ Sbjct: 145 TERGFKNVFRIAAKDSWWVRDQFRFLKDMQEETGVKLKTIAFVFENGDWGTGFAEKWREL 204 Query: 185 LKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ 244 K +V + + D + ++ +LK N D V + + + ++ + Sbjct: 205 AKKDGYQIVLDEPYPSTATDLTPVVTKLKSANPDIVLLVSNAADAILLTNNMTEMQVRPK 264 Query: 245 FMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKK----DPSGPYV 300 + G G+A + + + ++ D G + KK D +G V Sbjct: 265 VVLASGGGHADPKFLENTGTNALGLFDEVEWNTDVNKPGAKETNAKFKKKYGYDLTGESV 324 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP 340 YAAV +A ALER S +P A ++D A N GP Sbjct: 325 -DAYAAVYVIADALERAASTDP-AKIRDALAT-TNLTTGP 361 >UniRef50_Q1M9I2 Putative branched-chain amino acid ABC transporter binding component n=2 Tax=Rhizobium RepID=Q1M9I2_RHIL3 Length = 419 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/372 (24%), Positives = 165/372 (44%), Gaps = 34/372 (9%) Query: 2 KRNAKTIIA-GMIALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 KR ++A M ALA++ A ++D IK+ A+SGP+A G + ++D+N+ Sbjct: 6 KRELLRVMALTMGALALTQPAWSEDQPIKIGSSMALSGPLAGGGRQSQLALQMWVEDVNS 65 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 +GG+ G K+ V YDD P Q+ + +K+++ D +I + + ++ G Sbjct: 66 RGGLLGRKVELVTYDDQGSPAQSPGIFSKLIDLDNADLLIAPYGTVPAAAVMPLVKERGR 125 Query: 118 LMISPGATNPELTQRGYQ---HIMRTAGLDSSQGPTAAKYI------LETVKPQRIAIIH 168 L+I Q GYQ + ++S A ++ ETV +++A + Sbjct: 126 LLIG---------QIGYQINSKVHHDMWFNNSPWNDAESWVGGFFKLGETVGVKKVAFLA 176 Query: 169 DKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPE 228 Q++ + + + A V+ DFSA+I ++ + D V+ Y + Sbjct: 177 ADQEFSQNILAGAKALAGKAGFETVYEQTYPPTTVDFSAMIRAIRAASPDMVFVASYPAD 236 Query: 229 MGQMLRQARSVGLKTQFM----GPEGVGNASLSNIAGDAAEGML---VTMPKRYDQDPAN 281 ++R +G+ + G G+ AS+ G G++ +P++ P Sbjct: 237 STAIIRAVNEIGVGSSVKLFGGGMVGLQYASVMQALGSQLNGVVNYHTYVPEKTMAFPGV 296 Query: 282 QGIVDAL----KADKKDPSGPYVW-ITYAAVQSLATALERTGSDEPLALVKDLKANGANT 336 + +D KA K + G YV +YA+ Q L A++ TGS + L K L+ N T Sbjct: 297 KEFLDRYAEKAKAAKVETLGYYVAPFSYASGQILEQAVKATGSLDNAELAKYLRTNEVQT 356 Query: 337 VIGPLNWDEKGD 348 ++GP+ W G+ Sbjct: 357 IVGPIRWGTDGE 368 >UniRef50_C1CVB8 Putative branched chain amino acid ABC transporter, periplasmic component n=1 Tax=Deinococcus deserti VCD115 RepID=C1CVB8_DEIDV Length = 384 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 85/358 (23%), Positives = 165/358 (46%), Gaps = 21/358 (5%) Query: 6 KTIIAGMIALAISHTAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 + ++ +++A++ +A A IK+ + +++G A++G M+ G + + ++N KGGI G Sbjct: 2 RKVMLFTLSIALAGSAAAQGTIKIGAITSITGRFAEFGKMQLAGFKVGVAEVNRKGGIGG 61 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 K+ + D+A D + +A A ++VN G+ VI SS + + + + + + Sbjct: 62 RKIELLIEDNASDVNKGLAAAERLVNAGVPLVINEYSSSLVKAQAQYLARQKVPNLVITS 121 Query: 125 TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR---IAIIHDKQQYGEGLARSV 181 + ++T+ G +I R + A+ IL + ++ +A+I + + +A + Sbjct: 122 SGDDITKPGSDYIFRL----NQPATEYARVILNIFRDKKFKTMAVIAGTGAFEKSVADAA 177 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 Q K ++V G DF ++ R+K +N D + Y + ++RQAR VG+ Sbjct: 178 QVIAKEYGISIVEDQRYDKGLTDFRPVLNRIKAKNPDGLLMVSYAEDSVALMRQAREVGV 237 Query: 242 KTQFM--GPEGVGNASLSNIAGDAAEGMLVT---MPK-RYDQDPANQGI-VDALKADKKD 294 K + G G +G AAE ++ +P+ RY P Q + V+ +KA Sbjct: 238 KPRLFAGGAAGFALPEFVKDSGSAAESVITATAWIPQLRY---PGVQKLNVELVKALGGH 294 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 + YA V A A+ R G+ + + + L + T GP+ + D GF Sbjct: 295 EPSYHAAQAYAGVIVAAEAIRRAGNTDREKVKEALNSVNMQTAFGPIQFK---DYDGF 349 >UniRef50_A0LKN5 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKN5_SYNFM Length = 380 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 4/299 (1%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D I++A + A++G G R A+++INA+GG+ G +L +D+ P + Sbjct: 34 DVIEIAAIYALTGEATDTNATSVRGVRIAVEEINARGGVLGRRLRLEIHDNRSTPIGSHL 93 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A + + ++G S + P + + + G+ MI+ +T+P++T+ G I R Sbjct: 94 AAERAADSDAVAILGASRSPHSLPIAKVAQARGVPMITNHSTDPDITRVG-NCIFRVCFT 152 Query: 144 DSSQGPTAAKYILETVKPQRIAI-IHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D QG A++ E +K + ++ +Y G+ + Q + V+ + + Sbjct: 153 DEVQGAALARFAREDLKASTATLFVNLASEYSTGICQVFQKHFEQLGGRVILVREYKSRQ 212 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 +DF L+ + D ++ G Y E G + A+ G+ ++F+G +G+ N S GD Sbjct: 213 RDFEDLVRDAGRVQADVLFLSG-YDESGLIAVLAQDKGVTSKFVGGDGLANPSFLAKGGD 271 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 + + D A D D G + Y AV LA A++R GS E Sbjct: 272 RLKRAYYSSHWTPAMDSRRSREFTARYGDVPD-FGTGTALAYDAVMVLADAIKRAGSAE 329 >UniRef50_Q47QP5 Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Thermobifida fusca YX RepID=Q47QP5_THEFY Length = 415 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 99/363 (27%), Positives = 157/363 (43%), Gaps = 44/363 (12%) Query: 35 SGPIAQWGDMEFNGARQAIKDINAKGGIKGD---KLVGVEYDDACDPKQAVAVANKIVND 91 SG +A G + + A AI++IN GG+ G KL+G D+A D QA AN++++ Sbjct: 50 SGDLAFLGPPQISAAEYAIQEINDAGGVLGTELPKLIGG--DEAGDAAQANETANRLLDQ 107 Query: 92 GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR---GYQHIMRTAGLDSSQG 148 G+ ++G S T+ D ++ S T P+LT GY RTA D QG Sbjct: 108 GVDAILGAAASGMTKAVIDSITGAEVVQCSGSNTAPDLTDYPDGGY--YFRTAPSDLMQG 165 Query: 149 PTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSAL 208 P A+ IL Q +AII+ YGEGLA SV + L+A+ A V + +F A Sbjct: 166 PVLAETILADGH-QSVAIIYRADDYGEGLANSVSEALEASGAEVTAKESYDPNATNFDAA 224 Query: 209 IARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT-QFMGPEGVGNASLSN-IAGD---A 263 + + + V+ + E Q + GLK Q +G+ ++ LS+ + D Sbjct: 225 VNAVVNSKPEAVFLAS-FEEGVQAISGLLEAGLKADQMYSADGMNSSDLSSRVNADDPSV 283 Query: 264 AEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPL 323 G T P P + + D +D + Y ++A A E GS +P Sbjct: 284 LAGFTGTAPGV--NAPEFEQALAEFNPDLQDYQ--FAAQVYDCAITIALAAEAAGSTDPK 339 Query: 324 ALV-------------------KDLKANGANT----VIGPLNWDEKGDLKGFDFGVFQWH 360 V +DL A GA+ + GPL++D+ G++ F ++ ++ Sbjct: 340 DFVSEMVNVTRDGEKCTSFVECRDLLAEGADIDYDGISGPLDFDDNGNVTAASFMIYGFN 399 Query: 361 ADG 363 G Sbjct: 400 DKG 402 >UniRef50_A9KIM2 Extracellular ligand-binding receptor n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIM2_CLOPH Length = 388 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/333 (23%), Positives = 152/333 (45%), Gaps = 11/333 (3%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK-GDKLVGVEY---DDACDP 78 A K+ +G ++G A +G NGA AIK+IN GG+ GDK +E DD P Sbjct: 41 AATFKIGGIGPLTGEAASYGISVKNGATIAIKEINDAGGVTVGDKNYILEMNFADDQASP 100 Query: 79 KQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 + AV N +++ G + ++G + S S + GI ++P + E T+ Y++ Sbjct: 101 EIAVTAFNTVMDWGAQAILGSVTSGSCLAIRKDTFETGIFQLTPSGSAAECTE--YENAF 158 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDG 197 R D QG T A E + ++IAII++ +Y G+ ++ + + +V + Sbjct: 159 RLCFTDPLQGVTLANLAKE-LGYEKIAIIYNNSDEYSTGVMQAFSEQVTLNGGTIVASEA 217 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 DF+ + ++K + + ++ YY + + +QA +G+ F+G +G + L+ Sbjct: 218 FAKNAIDFNTQLTKIKATDAEVIFVPAYYNDAAYITQQASDLGMNLPFLGSDG-WDGVLA 276 Query: 258 NIAGDAA-EGMLVTMP-KRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 + A EG + P D+ P + V+ +++ + Y +V + ALE Sbjct: 277 QVKDPAVLEGAIFLSPFFASDEAPVLKKFVETYQSNYNAVPDQFAADGYDSVYVIKAALE 336 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 + S + ++ + + + G +++ G+ Sbjct: 337 KASSVDSKDMISAMTQITVDGLTGSVSFTADGE 369 >UniRef50_Q7M8R4 ABC TRANSPORT SYSTEM PERIPLASMIC BINDING PROTEIN n=2 Tax=Helicobacteraceae RepID=Q7M8R4_WOLSU Length = 372 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 15/270 (5%) Query: 11 GMIALAI-----SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI--K 63 GM LA+ + + +A ++K+ VV +SG I +G A + I IN Sbjct: 3 GMFKLALISAVAAGSLVAAEVKIGVVLPLSGAIGGYG----QSANKGITLINELKPTLAN 58 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 GD + V D+ D ++ K+V+ D + VIG L S++T + I +D +I+P Sbjct: 59 GDTIKLVVVDNKSDKIESANAMQKLVSSDKVDAVIGALTSTNTLAMTKIADDTKTPLIAP 118 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSV 181 ATN +T +G ++ R DS QG A +K ++ A++ D Y GL ++ Sbjct: 119 VATNDRVT-KGRNYVSRVCFSDSFQGVIGANLAYNDLKAKKAAVLFDSGSDYSIGLTKAF 177 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + + + AG KDF A I+ +K + +D VY Y E + Q++ +GL Sbjct: 178 KQQFTKLGGKIEIEAQVPAGTKDFKAQISSVKAKGVDVVYIPIYSNEAALIAIQSKQLGL 237 Query: 242 KTQFMGPEGV-GNASLSNIAGDAAEGMLVT 270 F+G +G+ + + +A EG + T Sbjct: 238 NVPFIGGDGIAADKVFFEVGKEAIEGYMAT 267 >UniRef50_UPI00016BFE10 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFE10 Length = 384 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 7/232 (3%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A+ IK+ ++G AQ+G GA AIK+ N GG+ G ++ + ++D + Sbjct: 30 ANTIKIGGSFDVTGATAQYGIPANKGAILAIKEYNEAGGVLGKQIEYI-FEDNKGVQTDA 88 Query: 83 AVANKIVNDGIKYVIGHL---CSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A A K ++D K VIG + S +T+ +++ + +GI MISP AT E+T +I R Sbjct: 89 ASAYKKLSDS-KDVIGFIGADISGTTETIANLAKXDGIPMISPSATKKEITSIA-PNIFR 146 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAI-IHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 +D +QG A + ++ + A+ I+++ Y G+A + + ++A +VV Sbjct: 147 ACYIDPTQGEILANFADTSLNAKTAAVMINNESDYSVGIAEAFIEQVEALGIDVVAQVNY 206 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 TA + DF +++A + N D + YY + ++ QAR +G+ F+G +G Sbjct: 207 TAADVDFKSILAPVANANPDVILIPDYYEAVAKIAPQAREIGISGTFLGGDG 258 >UniRef50_A3U1C1 Hypothetical branched-chain amino acid ABC transporter, periplasmicamino acid-binding protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1C1_9RHOB Length = 425 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 13/256 (5%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 +A D ++ V+ +SGP+A G+ G A++ +N GG+ G V D + Sbjct: 29 SAAGDAARLGVLLPLSGPLASLGNDVRRGFELALQFVNEDGGVFGQDAELVTVDVPSSTE 88 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 I ++ + V+G SS + AS + E ++ GA ++T RG++H+ R Sbjct: 89 ATSQATRLITSERVGVVMGSYASSISFAASQVAERNKVVYFEQGAVADDITSRGFKHLFR 148 Query: 140 TAGLDSSQGPTAAKYILETVKPQ--------RIAIIHDKQQYGEGLARSVQDGLKAANAN 191 S G AAK+ L++V P+ ++A++++ YG + + L A N Sbjct: 149 FIYPASELGGGAAKFTLDSVLPRIGMSAGDVKVALLYEDSFYGTAVGEGARKVLTEAGVN 208 Query: 192 VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV 251 +V + D S ++ R + D + Y P+ RQAR GL+ + + V Sbjct: 209 IVDDTSYSYKTTDLSPMVQRYVQLQPDVLLVCQYTPDGILFWRQAREAGLEVKAI----V 264 Query: 252 GNASLSNIAGDAAEGM 267 GN N+ GD A+ + Sbjct: 265 GNGGAHNV-GDFADAL 279 >UniRef50_C3HBK1 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 RepID=C3HBK1_BACTU Length = 366 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 26/298 (8%) Query: 73 DDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR 132 DD+ ++ A ++VN G++ VIGHL S+ A+ IY IL ++P +T LT++ Sbjct: 67 DDSISGINDISAAERLVNKGVQAVIGHLSSTEALRAAPIYNVNDILYLAPASTELSLTEK 126 Query: 133 GYQHIMRTAGLDSSQGPTAAKYILE-TVKPQRIAIIHDKQQYGEGLARSVQDGLKAANAN 191 Y +++R G D+ +IL + ++II + +G L+ V+ L Sbjct: 127 EYNNVLRICGKDNYLAEKVVDFILNFNCTNKYVSIIWEDIIHGRSLSNQVEKYLSKK--- 183 Query: 192 VVFFDGITAGEKDFSALI----ARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG 247 G T ++ + I +K+ NI +++ G Y + LR+ + V + + Sbjct: 184 ----KGCTILKQKWDVQINFNDLNIKRSNI--IFFAGIYQSALEFLRKLKEVDYRGIIIL 237 Query: 248 PEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP----YVWIT 303 + + + E + V R + N D + K+ SG Y + Sbjct: 238 GDDCFIDEFAKELKNNNENLYVVSTGRNN----NHSYYDTFSKNYKNISGTQVGAYSITS 293 Query: 304 YAAVQSLATA---LERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 Y A L + L+R G E + + L +T++G + D++GDLK F + V+Q Sbjct: 294 YVATSLLLSTLPILQRKGIKECINRMSSL-LRTKSTLLGNIQLDDRGDLKNFPWDVYQ 350 >UniRef50_Q1GH61 Extracellular ligand-binding receptor n=43 Tax=root RepID=Q1GH61_SILST Length = 399 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 84/285 (29%), Positives = 127/285 (44%), Gaps = 25/285 (8%) Query: 6 KTIIAGMIALAISH-TAMAD------DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 K ++ A+A+S TA AD ++K+ V+ +GPI +GA A+ ++ Sbjct: 2 KKLLTATAAIALSAGTAFADGHGHPDEVKLGVLFGFTGPIESLAPTMASGAELAMSEVTE 61 Query: 59 KGGI-KGDKLVGVEYDDAC-DPKQAVAVANKIVNDGIKYVIGHLCSSSTQP-ASDIYEDE 115 G + G K+ + D C D A A A K++ DG ++G CS T ++ Sbjct: 62 SGKLFGGAKVTPMRADTGCIDNGLATANAEKLIADGANGIVGGDCSGVTGAILQNVAIPN 121 Query: 116 GILMISPGATNPELTQRGYQHIM-RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYG 174 G++MISP A++P LT + RT D+ QG A IL IAI + YG Sbjct: 122 GMVMISPSASSPGLTSMEDNGLFFRTTPSDARQGEIMAS-ILADRGVDSIAITYTNNDYG 180 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 +GL+ S++ +AA V G+ D+SA +A L D + GY + G + Sbjct: 181 KGLSDSIKSAFEAAGGEVTIVTAHEDGKGDYSAEVAALASAGGDILVVAGYLDQGGLGII 240 Query: 235 QAR-------SVGLKTQFMG---PEGVG---NASLSNIAGDAAEG 266 Q + GL +G P VG N S IAG +EG Sbjct: 241 QGALDTGAFDTFGLPDGMIGDSLPNNVGPDLNGSFGQIAGSDSEG 285 >UniRef50_A1VTJ7 Extracellular ligand-binding receptor n=6 Tax=Burkholderiales RepID=A1VTJ7_POLNA Length = 407 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 155/347 (44%), Gaps = 27/347 (7%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+A + +SG A G NG A+K+INA GGI G ++ D +P A + Sbjct: 28 IKIANIVELSGSGATAGTNFKNGIELAVKEINASGGILGKQIQTTTSDTQSNPGVAKGLT 87 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPE---LTQRGYQHIMRTAG 142 K +++ + + G + S S + E P T E +T++G ++ RT+ Sbjct: 88 QKAIDNDVFAIFGPVFSGSIM----VSMAESRRAEVPNFTGGEAAAITEQGNPYVFRTSF 143 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 ++ P A+Y+ + K + IA+I+ +G+G ++ L+ ++ + AG+ Sbjct: 144 TQATAMPKVARYMSDQAKLKTIAVIYVNNDFGKGGLDMLKKALEDSSTRITTAISTDAGQ 203 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DFSA + + K+ N + V+ E ++LR+ R G +G + + +AGD Sbjct: 204 VDFSAAVLKAKQSNAEGVFVYSNEEESARILRELRKQGWTKPIIGETTLTGQKVIELAGD 263 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWIT-------YAAVQSLATALE 315 AA G + + + V A++A Y +++ Y+ + L A++ Sbjct: 264 AANGAIAHVGLTVNAP------VPAVRAFSAKFEKEYSYVSDHNGMKGYSGIYFLKAAID 317 Query: 316 RTGSDEPLAL---VKDLKANGANTVIGPLNWDE---KGDLKGFDFGV 356 + G + A+ + LK N ++ G L + E KGDL F V Sbjct: 318 KVGKLDRKAVADAMHHLKVN-SDRYPGALMYTEFDGKGDLDRMSFMV 363 >UniRef50_B5Y600 Putative branched chain amino acid ABC transporter substrate-binding protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y600_COPPD Length = 538 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 5/249 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 +IK+ A+SGP+A G ++G + I IN +GG+ G K+ + DD +P V Sbjct: 179 EIKIGSFSALSGPLAVIGIPFYHGLQSYINWINDQGGVNGRKIKVIIADDQMNPALTVPA 238 Query: 85 ANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 K V D + V+G L + D ++G+ + G +++ Sbjct: 239 VKKFVEEDKVFAVVGGLGTPGCLAVMDYLNEKGVPFVYQGGGASAFAYPPKKYVFAVQPN 298 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 ++G K+ + + + A+++ G+ A+ VQ+G+K ++V+ E Sbjct: 299 YMTEGQAFVKFARQNLNTSKFALLYQNDDAGKEGAQGVQEGVKKYGGSLVYSSSFPGTET 358 Query: 204 DFSALIARLKKE--NIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 DF++ + R+K + F+Y ++ A+S+GL + + P A ++ +AG Sbjct: 359 DFTSYLTRIKNSGAEVIFLYAPANTSAGANAVKTAKSLGLTQKIILPYSY--AGITAMAG 416 Query: 262 DAAEGMLVT 270 DAAEG+ +T Sbjct: 417 DAAEGVYIT 425 >UniRef50_Q5P4W9 Probablel eucine-Binding Protein (LBP) n=2 Tax=Rhodocyclaceae RepID=Q5P4W9_AZOSE Length = 386 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 81/327 (24%), Positives = 142/327 (43%), Gaps = 18/327 (5%) Query: 9 IAGMIALAISHTAMA-------DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 + G++ALA+S TA A D+I V + +SGPIA G +G +D NA GG Sbjct: 7 LLGVVALAVSCTAAAEAPGVSRDEIVVGSIQDLSGPIALLGVPVRDGMLMRFEDANAAGG 66 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 + G L V D DPK+AV A K++ D + + +L + I G + Sbjct: 67 VHGRTLRLVVEDSGYDPKKAVLAARKLIQRDHVFAFLANLGTPVVMATMPIVVGAGRPHL 126 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQG--PTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 P +P + +H ++ Q A +++++T + +++ +++ YG + Sbjct: 127 FP--FSPHESTYAPRHPLKFQMFAPYQDYMDAATRFMMQTRRYRQVCVLYQDDDYGLEVM 184 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + V+ L A N + G D S+ IARL+ DFV E + +AR Sbjct: 185 KGVERALAALNQPLAAKTSYKRGATDLSSQIARLRGAGCDFVVLATVVRETVAAVAEARK 244 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGM--LVTMPKRYDQDPANQGIVDAL-KADKKDP 295 G + +A + G EG+ + +P Y + A++ + + + + K+ Sbjct: 245 TGWTVDMLVTASGYSAQTHELGGKTVEGLYGVSVLPHPYAEG-ASRPLAEWIERYRKRFG 303 Query: 296 SGPYVW--ITYAAVQSLATALERTGSD 320 + P VW + YAA A E+ G + Sbjct: 304 AAPNVWSVMGYAAADLFVKAAEQAGPE 330 >UniRef50_D0L9S4 Extracellular ligand-binding receptor n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L9S4_GORB4 Length = 419 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 5/205 (2%) Query: 71 EYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL 129 E+D P++A + I+ D + ++G S G++ SP AT+P+L Sbjct: 134 EFDTEGTPERAAQLPAGILGDPSVVGLVGPWTSGEAFAMGPALNTAGLVFASPSATSPKL 193 Query: 130 TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGL-KAA 188 Q G++ R D G AA ++ +T + ++ ++ + LA +V L +AA Sbjct: 194 VQSGWRTFFRGTITDQDLGVAAANHMSKTRRFNKVCVVGNDSDSSSDLAPTVAANLGQAA 253 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM-G 247 V +T G D+S ++R+K+ D V+Y G Y E ++RQ R+ + + F+ G Sbjct: 254 AVGCVL--TVTRGANDYSEQVSRIKQIAPDAVFYAGTYLEASALVRQLRAAAVTSVFLAG 311 Query: 248 PEGVGNASLSNIAGDAAEGMLVTMP 272 P+ V N AG AA LVT P Sbjct: 312 PDSVYNPRFPATAGPAASRSLVTCP 336 >UniRef50_Q2KVE9 ABC transporter, substrate-binding protein n=1 Tax=Bordetella avium 197N RepID=Q2KVE9_BORA1 Length = 385 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 23/272 (8%) Query: 15 LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI----KGDKLVGV 70 L + T A+ +K+ VVG M+GP A WG G + A+++ N GG+ K K+ + Sbjct: 14 LLTALTVQAETLKLGVVGGMTGPGAPWGLAIDGGVKVAVEEANQAGGLDVAGKKYKVEVI 73 Query: 71 EYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL 129 YDD AV N++++ D +K++IG + S+S I E +L++S + + E+ Sbjct: 74 TYDDHYKAADAVTAVNRLIDQDDVKFIIGPIGSASVMAMKPITERNKVLLLS-NSYSTEI 132 Query: 130 TQRGYQHIMRTAGLDSSQGPTAAKY------ILETVKPQ--RIAIIHDKQQYGEGLARSV 181 +++ R PT +Y L+ P+ R+AI+ G ++ Sbjct: 133 LDANTRYLFRVL-------PTTYEYNGQLIGWLKKNHPELKRVAILSPNDATGWSTQKTQ 185 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYP-EMGQMLRQARSVG 240 + + A V + DF L+ + +N+DF+ P G ++RQAR +G Sbjct: 186 KKAYEDAGYTVADAKFFERSQNDFRTLLTSILAKNVDFIELDTVPPGPAGIVIRQAREMG 245 Query: 241 LKTQFMGPEGVGNASLSNIAG-DAAEGMLVTM 271 K +F G A AG D AEG LV + Sbjct: 246 FKGRFTKFGGNNVAETVKSAGADNAEGTLVYL 277 >UniRef50_C8WA26 Extracellular ligand-binding receptor n=2 Tax=Atopobium RepID=C8WA26_ATOPD Length = 393 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/354 (24%), Positives = 149/354 (42%), Gaps = 15/354 (4%) Query: 9 IAGMIALAISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 IAG ALA D I V V+G +G +AQ+G +G +K+ N KGG+ G + Sbjct: 17 IAGSFALAGCSPKNQDPNSIYVGVMGPFTGDVAQYGLAVRSGVLLYLKEFNKKGGVNGRQ 76 Query: 67 LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATN 126 +V V D+ D +A+ V NK++++ + ++G + S+ T + + I ++ AT Sbjct: 77 IVPVVEDEKGDSTEAILVYNKLLDENVCAILGDVTSTPTIALAQKSVLDNIPCVTASATA 136 Query: 127 PELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLK 186 ++ G ++ R D QG A++ + + I + Y G+ + + Sbjct: 137 EDVVTHG-NNMFRATVTDPFQGVVLAEFAKKQGYQRVGTIFNSGGDYEIGVNNAFVQKAR 195 Query: 187 AANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 246 VV G G DF+A + + + D + YY + G+++ QAR +G K FM Sbjct: 196 ELGIEVVSQQGYPTGAVDFNAQLTSIIGLDPDVILAPNYYQDNGKIVTQARQLGCKKPFM 255 Query: 247 GPEG----VGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWI 302 G +G +G A D + + D Q V A + + + + Sbjct: 256 GADGWAGIIGGEQDYASATDLEGCFYCSAFVASNPDEKVQHFVTAYTEEYGEAPTNFCSL 315 Query: 303 TYAAVQSLATALERT-------GSDEPLALVKDLKANG-ANTVIGPLNWDEKGD 348 Y A L +ALE SD + D A+G V G L++ GD Sbjct: 316 GYDAAMILCSALEVVEKHGYTYNSDAYRQAIIDAIASGVVEGVTGALSYQGTGD 369 >UniRef50_A6UKD7 Extracellular ligand-binding receptor n=2 Tax=Sinorhizobium RepID=A6UKD7_SINMW Length = 390 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/356 (24%), Positives = 163/356 (45%), Gaps = 16/356 (4%) Query: 1 MKRNAKTIIAGM-IALAISHTAMADDIKVAVVGA--MSGPIAQWGDMEFNGARQAIKDIN 57 M + +K +A IALA S + ADD K+ + GA M+G A +NGA+ A+K +N Sbjct: 1 MIKTSKLFLAAAGIALA-SSASFADDDKIVIGGALSMTGIQAPLDTPGYNGAQVAVKFLN 59 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGI 117 GG+ G ++ + D DP VA ++++ G + ++ PAS + G+ Sbjct: 60 DNGGVLGKQIEFINIDGKSDPVTVGNVAVELIDKGAQVIVAPCDFDFGSPASREAQSAGL 119 Query: 118 LMISPGATNPELTQRGYQHIMRTAGL-DSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGE 175 + IS A++P + T + +++ G TAA + ++ + ++ D+ Y + Sbjct: 120 VGISTCASDPLYSSWSLGDKQFTLSMWNTTMGATAADFAVKEKGWKTAYVVTDQFIAYTK 179 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKK--ENIDFVYYGGYYPEMGQML 233 L++ + KA ++ D T G+ +FSA +ARL+ + D ++ Y ++G ++ Sbjct: 180 SLSKYFVEQFKANGGEILLEDTYTNGDNNFSAQLARLQALGKKPDVIFVSSYGTDIGVII 239 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGD--AAEGMLVTM----PKRYDQDPANQGIVDA 287 R R VG +G + + ++ G+ VT P+ + + P + Sbjct: 240 RALREVGYDAPVLGGDAYDDPAMHQALGEQFGNHVYFVTHTWMGPEAHPEMPKFIELYTE 299 Query: 288 LKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 + K P +V + + LA A++ G+ E AL K L+ + G L++ Sbjct: 300 MFG--KAPDTSFVSTGWDTIMLLAEAIKAAGTTEGAALAKALEDGQFKLLTGDLDY 353 >UniRef50_A5G352 Extracellular ligand-binding receptor n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G352_ACICJ Length = 411 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 102/392 (26%), Positives = 170/392 (43%), Gaps = 31/392 (7%) Query: 2 KRNAKTIIAGMIALA-ISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 +R A AG LA S A+A D + + ++G A+ + +GA+ AIK N Sbjct: 5 RRKALRGAAGTFILASASPIALAADKVYHIGITLPLTGADAEAAHLILHGAQLAIKLANQ 64 Query: 59 KGGIKGDKLVGVEYDDAC------DPKQAVAVANKIVNDGIKYVIGHL---CSSSTQPAS 109 G + +L + ++A DP QA A K+ G + V+ ++ S S + + Sbjct: 65 SGELGDIRLEPMILNNATATAGQYDPAQAATNARKLA--GTRTVLANVGPEMSGSGKAMA 122 Query: 110 DIYEDEGILMISPGATNPELTQRGYQH---------IMRTAGLDSSQGPTAAKYILETVK 160 I + I+P +T P++T Y RT D+ QGP A + E +K Sbjct: 123 PILSMANLATITPSSTAPDITNPAYAGEFDPGGKPIYFRTVTTDAYQGPNMANFYAEVLK 182 Query: 161 PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFV 220 + + I+ D YG GLA + + K V+ D + D+SA++ ++ + Sbjct: 183 VKSVYILDDSGAYGVGLANAFEAQAKKKGIKVLGRDRLDPKAADYSAVLTKIAATKTASL 242 Query: 221 YYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVT--MPKRYDQ 277 YYGG ++++Q+ + G +G+ + + AG AAEG T P D Sbjct: 243 YYGGTMQAGVKLVKQSYQIIPHVIKGGGDGILSPEMMTAAGFPAAEGWYGTNASPHVVD- 301 Query: 278 DPANQGIVDALKADKKDPSGPYVWITY-AAVQSLA--TALERTGSDEPLALVKDLKAN-G 333 DP V Y Y AA+ ++A A+++ G A V+D A Sbjct: 302 DPKLANWVKLYTKTYGVAPDDYAITAYDAALVAIAGIKAVQKAGKPLTAANVRDAIATVH 361 Query: 334 ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 N + GP+++D+ GD+ VFQ+H D S+ Sbjct: 362 VNGLQGPISFDKYGDMTSHIVAVFQFHQDKSA 393 >UniRef50_C4XSR4 ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSR4_DESMR Length = 415 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 143/334 (42%), Gaps = 28/334 (8%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK---GDKLVGVEYDDACDPKQAV 82 +K+ V +SGP A G AI++INA GGIK G KL V D DP V Sbjct: 34 VKIGNVEPLSGPSASVGVQGKQAREMAIEEINAAGGIKSLGGAKLELVYADSKSDPTVGV 93 Query: 83 AVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 +++N + + + G S+ T PA+ + E GI + P A +T+RG++++ R A Sbjct: 94 TETERLINTEKVNLMTGCWNSAVTYPATQVAERYGIPFVVPVAVRDTITERGFKNVFRIA 153 Query: 142 GLDSSQGPTAAKYILET-----VKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 DS +++ + VK Q+IA + + +G G A ++ K VV + Sbjct: 154 AKDSWWVRDQFRFLKDMQEETGVKLQKIAFVFENGDWGTGFAEKWRELAKKDGYEVVLDE 213 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 + D + ++ +LK D V + + + +K + + G G+A Sbjct: 214 PYPSTATDLTPVVTKLKAAKPDIVMLVSNAADAILLTNTMAEMQVKPKVVLASGGGHADP 273 Query: 257 SNIAGDAAEGMLVTMPKRYDQD-------PANQGIVDALKADKK---DPSGPYVWITYAA 306 + + + ++ D PAN+ K KK D +G V Y A Sbjct: 274 KFLENTDTNALGIFDEVEWNTDVNKPAAKPANE------KFKKKYGYDLTGESV-DAYVA 326 Query: 307 VQSLATALERTGSDEPLALVKDLKANGANTVIGP 340 + +A ALER S EP A ++D A N GP Sbjct: 327 MYVIADALERAASTEP-AKIRDALA-ATNLTTGP 358 >UniRef50_C0Z9I1 ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9I1_BREBN Length = 376 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 150/333 (45%), Gaps = 24/333 (7%) Query: 27 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ-AVAVA 85 K+ VVG +SG A +G+ + G A+ ++N KG + ++++D+ K+ A+ Sbjct: 34 KLGVVGFLSGSGAAYGEAQKAGLELALGEVNEAN--KGKLKIELKFEDSAGEKEGAINAV 91 Query: 86 NKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 NK++N D + +IG S A + + + T+ + G +++ R + + Sbjct: 92 NKLINQDNVVAIIGPTLSGEMFAAGPVANEAETPIFGISNTSEGINDIG-EYVFRNSLPE 150 Query: 145 SSQGPTAAKYILETVKPQRIAIIH----DKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 S PTA K +E +++A+IH D G + ++ + L F Sbjct: 151 SIAIPTAMKAAVEKNGLKKVALIHASNDDFSVNGYKVMKATAEKLGLEITGEATF---AN 207 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G+ DFSA + +LK+ N D + Y E ++++AR +G +G G N + IA Sbjct: 208 GDVDFSAQLTKLKQTNPDALLVSALYKEGSMVVKKARELGFTRTILGGNGFNNPKVFEIA 267 Query: 261 GDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL----- 314 G AAEG++V P + +D Q V A +A + Y ++ ++ +L Sbjct: 268 GPAAEGLIVATPFSPEKKDDKVQAFVKAFEAKYNKKPDQFAAQAYDSLYIMSQSLLAAGK 327 Query: 315 -ERTGSDEPLALVKDLKANGANTVIGPLNWDEK 346 +R LA +KD V G L++DEK Sbjct: 328 ADREALRGQLAQLKDFTG-----VSGKLSFDEK 355 >UniRef50_Q11L42 Extracellular ligand-binding receptor n=1 Tax=Chelativorans sp. BNC1 RepID=Q11L42_MESSB Length = 390 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 4/246 (1%) Query: 5 AKTIIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 A ++AG+ + A++ + DD I++ G ++GP++ +G NGA +INAKGGI Sbjct: 11 AAALLAGVSSAALAEPGVTDDKIRIGTFGPLTGPVSIYGYPIINGAVAVYNEINAKGGIH 70 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVI-GHLCSSSTQPASD-IYEDEGILMIS 121 G K+ V DDACD + A K+V+ + I G CSS+ A D I E M+ Sbjct: 71 GRKIEMVYEDDACDAAKTRAAVKKLVHSSDVFAIHGGTCSSAVNAARDEIIASEVPYMVM 130 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 + +T +++ T + G T ++ +++ I+ + + + ++ Sbjct: 131 AMVLD-SITSPVAKNMFTTTQTGTLDGVTMVNFVKSIPDVKKVVIVKNTDDWADSHLSTI 189 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 GLK A V + D + + N D V Y E LR+A+ GL Sbjct: 190 YPGLKEAGIEVAADIVLERNASDATTQALHSLEANADAVILVTYPNETAVFLREAKKYGL 249 Query: 242 KTQFMG 247 K F+G Sbjct: 250 KGPFVG 255 >UniRef50_C4WKT5 Leu/Ile/Val-binding protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WKT5_9RHIZ Length = 426 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 153/355 (43%), Gaps = 28/355 (7%) Query: 2 KRNAKTIIAGMIAL-AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 KR A + + +++L A S A A D+++ + +SG A G+ GAR A Sbjct: 69 KRPAAALTSIILSLLASSVLAQAADMRIGLAAPLSGTFAPLGNQLAEGARIA-------A 121 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 KG +LV DD CD + A V + ++ V G LC + + A + I ++ Sbjct: 122 ATKGAELV--ISDDRCDAEGGREAAEHFVRENVRIVTGFLCPDALEAALPVLAAGNIAIV 179 Query: 121 SPGATNPELTQR---GYQHIMRTA-GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 + G + P LT+R + R A GLD T + ++ + Q A+I D G Sbjct: 180 ASGVSEPTLTERRAPAPMAVFRLATGLDKETQATGS-FLGSLWRAQAFAVIDDGTIEGRE 238 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 A V LK VF D G + +AL+ARL++ VY GG ++ + A Sbjct: 239 RAARVLASLKEQQLQPVFTDTYRPGLDNQNALVARLRRAGATHVYVGGERDDIAAIGASA 298 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDA---AEGMLVTMPKRYDQDPANQGIVDALKADKK 293 ++ P + SL + A A ++G L+ P R + +DAL K Sbjct: 299 AALN------HPLTIAGGSLLDAAPGAQPLSQGTLMIAPVRPQDLSTAKPAIDALHQAAK 352 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKD-LKANGANTVIGPLNWDEKG 347 Y I YA+ + A A+ R +DE V D L+ TV+G + +D+ G Sbjct: 353 LADA-YAIIGYASAEIAADAILR--ADEKKQPVLDTLRTGSFETVLGTIKFDDNG 404 >UniRef50_D1VQJ4 Extracellular ligand-binding receptor n=1 Tax=Frankia sp. EuI1c RepID=D1VQJ4_9ACTO Length = 568 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 19/279 (6%) Query: 11 GMIALAISH---TAMADDIKVAVVGAM---SGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 G++ LA H A D +V +G M SG + G + A+ D N I G Sbjct: 116 GLVELARDHGDGVPGASDPRVLRLGVMAPLSGDLGNIGIAVRDAVTLAVDDANKTDAIPG 175 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 K+ V DD P A A +D + V+G L S+ + A + + G+ ++SP Sbjct: 176 WKVELVAKDDLSRPDGGAAAAEAFADDSSLIGVVGPLSSTVARVALPVLDAAGVPVVSPS 235 Query: 124 ATNPELT---------QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYG 174 ++P+LT +R Y R +G D+ Q T A Y ++T++ RI +I YG Sbjct: 236 NSSPDLTAQDASASTRKRPYSRYFRLSGTDALQAKTGADYAVDTLRRSRILVIDGGPSYG 295 Query: 175 EGLARSVQDGLKAANANVVF---FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 E LA AA A VV DG A + ++ ++ N D +Y Y Sbjct: 296 ESLAERFTRDATAAGAEVVASYQVDGDAAAAAEVQSVADGIQTLNPDLIYTTTGYLFASA 355 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVT 270 + ++ + L +G + + +A + AGD AEG L T Sbjct: 356 LRKRMAAAQLSVPLLGTDAMLSARYLDSAGDTAEGDLAT 394 >UniRef50_Q16A58 Branched-chain amino acid ABC transporter, periplasmic binding protein, putative n=4 Tax=Rhodobacteraceae RepID=Q16A58_ROSDO Length = 383 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 15/335 (4%) Query: 6 KTIIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 K+II + A+ A A D IK+ + M+G A + E+ GAR + INA GG+ G Sbjct: 3 KSIITALACTALVTPAFAQDTIKIGLGVPMTGDYAPYS--EWQGARCMAEMINADGGVDG 60 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQ-PASDIYEDEGILMISPG 123 + + D D + A+++A K +++G ++G + S T P + I + G+ + P Sbjct: 61 KMIEILVQDSGADTQTAISLAQKFLDEG-AVMLGTIPFSDTMIPVAQIAQGYGVSIFQPQ 119 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS--- 180 +T E+ + D AA Y LE K + ++ + G A++ Sbjct: 120 STQVEMHAGIVDNFFTGVSPDPFTATAAANYALE--KGVKNVVLLASDEGGSWSAKTPLW 177 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKK--ENIDFVYYGGYYPEMGQMLRQARS 238 + ++A V+ + G D+S IA ++ E +D VY P++G ++RQ RS Sbjct: 178 FGEVIEAGGGKVLSTLNFSFGTSDWSPQIAEMRALGEEVDAVYISSIMPDVGVLVRQLRS 237 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKK---DP 295 G+ +G +G + SL I D + A+ +V + K+ D Sbjct: 238 AGIDAWVVGSDGFDDPSLDAIGTDDPSILDKVFFATLAPSQADSAVVQFMADCKEMGIDV 297 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLK 330 G + V++LA A+E++GS +P + + ++ Sbjct: 298 PGLFPATGADTVKALAWAVEQSGSVDPETIAQTIR 332 >UniRef50_C3MCL1 Putative solute-binding component of ABC transporter n=1 Tax=Rhizobium sp. NGR234 RepID=C3MCL1_RHISN Length = 362 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 87/358 (24%), Positives = 152/358 (42%), Gaps = 18/358 (5%) Query: 14 ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYD 73 AL ++ A A +K+AVV GP A G +GA D +G ++V + Sbjct: 13 ALTLTSPAFAAGLKIAVVAPADGPFAALGKQITDGAAFQAAD-------RGSEIVPIA-- 63 Query: 74 DACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG 133 ++CDP A+ ++ G + IG LC+ S + A + GI I+ + L + Sbjct: 64 ESCDPAGGEALTKALLASGAEAAIGFLCTESLEAALPALAEAGIAAITLSVRSDILMEDA 123 Query: 134 YQH---IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANA 190 + + R A ++ I+ + + +A+I D + L SV++ L Sbjct: 124 IKKKWPLFRLAPSGKAEAAAITDAIVTNWRDKPLALIDDGTIHSRELVESVRNALAEIGL 183 Query: 191 NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 VF D ++ +L+ RL K V+ GG + + R A++ + +G + Sbjct: 184 TPVFTDTYRPAQEQQVSLVRRLAKSGATHVFTGGDRNDTAVIARDAKAENVPITLLGGDT 243 Query: 251 VGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSL 310 + A L + + VT+P A +V A++A +P G YV +AAV L Sbjct: 244 LNAADLDVPLENGV--LAVTIPDAARSSEAAP-VVTAMRAAGIEPDG-YVLPAFAAVSLL 299 Query: 311 ATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 A ++ D+ A++ L T +GP+ +D + G + + QW DG AA Sbjct: 300 EQAKDQAEKDDK-AVLDALSKGPYATALGPVRFDITHERAGSPYTLMQWR-DGRFAAA 355 >UniRef50_Q13LT2 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13LT2_BURXL Length = 392 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 84/340 (24%), Positives = 143/340 (42%), Gaps = 29/340 (8%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 I++ +V ++ A +G + GA KD+N GG+ G K+ DDACDP QA+A Sbjct: 34 IRIGMVAPLTSSFA-FGSLALLGAEAVYKDVNDSGGVNGRKIELSVVDDACDPNQAIADT 92 Query: 86 NKIVN-DGIKYVIGHLCSSSTQPAS-DIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 ++++ D + + G CS + ++ + + + GA + ++ +I + Sbjct: 93 KRLISQDQVFMIHGGWCSGNVMAMKPELAANPTLPFMDLGAASASISTPTQPNIFQPVAT 152 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 + + L +R+AII +G + LKA V + G+ Sbjct: 153 TMTVSQAMVDFALSKTGAKRVAIISTSDDWGRSHLNPILADLKAKGLTPVENVTMDRGDT 212 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD- 262 D ++ + R+K DFV Y PE+ +R GL + EGV + G+ Sbjct: 213 DATSQVLRIKAAKPDFVLAVLYAPELTIYVRSGFRYGLNAPIVTTEGVSIEDMVKRVGNP 272 Query: 263 -AAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 A + + V P + P + VD + K +P P I++ + TG+ Sbjct: 273 AATKQLFVFYPLSQPLNAPGFRKWVDMYR--KYNPGQPVETISF---------MGMTGA- 320 Query: 321 EPLALVKDLKANGANTV----IGPLNWDEKGDLKGFDFGV 356 LA+V+ LK G + I LN +LKGFD GV Sbjct: 321 --LAIVEALKHAGPDLTREKFIAQLN-----NLKGFDPGV 353 >UniRef50_Q1AZ39 Extracellular ligand-binding receptor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZ39_RUBXD Length = 413 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 84/345 (24%), Positives = 152/345 (44%), Gaps = 26/345 (7%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK---GDKLVGVEYDDACDPKQ 80 + IK+ + ++GP+A G + AI+DIN GGI+ G KL + D +P+ Sbjct: 33 ETIKIGSLHPLTGPLAVDGKRMDQAVKMAIEDINKAGGIEALDGAKLEFISGDTKGEPET 92 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 A + A +++++G ++G S++ + E + I AT + +GY++ R Sbjct: 93 ASSEAQRMIDEGAVALVGPYTSATAATIARTAERSQVPFIIDVATADSILAQGYRYTFRI 152 Query: 141 AGLDSSQGPTAAKYILETVKPQ-----RIAIIHDKQQYGEGLARSVQDGLKAANANVV-- 193 + G A+Y+ E + Q +A IH+ ++G + + Q + VV Sbjct: 153 QPGSQTMGEYGARYLKEISEAQGSPVESVAYIHESSEFGTSVFEAFQKEAQRLGIEVVRE 212 Query: 194 -FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVG 252 +D + D ++ + + K + D + GYY + G +L QA + +K GV Sbjct: 213 ITYDALNVS--DLTSELTQAKAADADVIVATGYYRD-GLLLAQA-AANVKPDVKAVYGVA 268 Query: 253 NAS--LSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVW----ITYAA 306 N + L DA + + Y D A L+ ++ +G + +Y A Sbjct: 269 NGAFDLDTFPEDAGDNGNYYLSSNYHYD-ATSDRARKLRQRFEERTGESMRTAAVFSYQA 327 Query: 307 VQSLATALERTGSDEPLALVKDLKANGANTVI----GPLNWDEKG 347 V+ +A ALER GS EP L + T + GP+ +D++G Sbjct: 328 VEVIADALERAGSSEPQELRDAIAETSLQTELFPFDGPIEFDDRG 372 >UniRef50_C9LQP4 Putative branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQP4_9FIRM Length = 386 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 76/328 (23%), Positives = 143/328 (43%), Gaps = 10/328 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ + A++G A +G + G R A+++IN KG I + V D P A+ V Sbjct: 41 VKIGFIAALTGGAAAYGKSQEEGIRMAVEEINQKGAIPIELFV---EDSKGSPSDAMNVT 97 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 +++ +IG + S+ + A I ++ I + T +T+ G +I R + +S Sbjct: 98 KRLIQKKAAVIIGPMTSNEAKAAGPIMQNAKIPSLEISVTAEGITEIG-DYIFRNSVPES 156 Query: 146 SQGPTAAKYILETVKPQRIAII--HDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 P AK + + AI+ HD +Q+ + + L+ +V + + + Sbjct: 157 MNIPQTAKKTHRLLGYETAAILYAHDNEQHVTA-QKYFRKTLEEEGVKIVDVETFGSKDS 215 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 ++SA + ++ D V YY E ++L++ R +G+ +G G + L +AG A Sbjct: 216 EYSAQLTNIENAKPDVVIVCSYYQEGVRILKKMREMGMNQPVLGDNGFVSPELGKMAGAA 275 Query: 264 AEGMLVTMPKRYDQDP-ANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 A+ + V+ +D A + V+ + Y V A++R GS Sbjct: 276 ADNVYVSSMWSAARDTAATKTFVENYTKKYGHAPDQFAAAAYDGVYMAMDAVQRAGSVTD 335 Query: 323 LALVKDLKAN--GANTVIGPLNWDEKGD 348 ++D A G N V G ++D+K D Sbjct: 336 TRKIRDAMAEMKGFNGVCGTFSFDDKRD 363 >UniRef50_Q30XN2 ABC-type branched-chain amino acid transport systems periplasmic component-like n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XN2_DESDG Length = 417 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 33/348 (9%) Query: 29 AVVG-AMSGPIAQWGDMEF-NGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVAN 86 AV+G A P+ ++ F +G R A+ N+ GG+ G + V P +A A Sbjct: 43 AVLGIAAVSPVTDPAEVSFQHGVRVAVAVFNSLGGLMGQPIRTVLIPLGSSPLEARHAAR 102 Query: 87 KIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSS 146 ++V+ +IG S+ +++ + I I+P A++P L RG +I R D++ Sbjct: 103 QLVHTPPLGIIGPSASTQALAMAEVLDRARIPTITPSASHP-LVIRGRPYIFRICNGDTA 161 Query: 147 QGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDF 205 A++I + R+A+I + Y ++ S D VV+ ++DF Sbjct: 162 NANAMARFITRHLGLSRVAVITNISSDYSISMSESFVDEAIRQGGEVVWRGQYLDRQQDF 221 Query: 206 SALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG------------------ 247 S +I +L + + V+ + G ++QA +GLKT F G Sbjct: 222 SVIIHQLLRLKPECVFLPDFMRSSGLFMQQAAGMGLKTVFAGGDAWDATLPRYAAAAAEN 281 Query: 248 --------PEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPY 299 PE A+ ++ D G + M + + + P AL+ +D +G Sbjct: 282 AYYMAQWIPEEPAGAAKNH--HDRCRGHITPM-RAFCKAPWLLARTHALRYLGRDFAGSL 338 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKG 347 + Y A L A R GS +P A+ + L + + GPL++D G Sbjct: 339 EALGYDAACVLLAAARRAGSCDPRAVREALAQTYWHGLTGPLHFDADG 386 >UniRef50_A8MJQ2 Extracellular ligand-binding receptor n=6 Tax=Bacteria RepID=A8MJQ2_ALKOO Length = 395 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 25/339 (7%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ + ++G A G++E G R A ++ + + G K+ V D+ D +A + Sbjct: 43 DVIKIGIFEPVTGAYAAGGELEVEGIRLA-NELYPE--VLGKKVELVLADNKSDVVEAAS 99 Query: 84 VANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 A ++V + + +IG S + A D+ + + ++P ATNP L +G R Sbjct: 100 AAARLVEKEKVTAIIGSWGSGLSIAAGDVIKGKA-PAVAPSATNP-LVTKGNDFYFRVCF 157 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKA----ANANVVFFDG 197 +D QG A Y +K ++ AII + Y GLA+ D K ANA +V Sbjct: 158 IDPFQGTVMANYAANNLKAKKAAIIQEVSNDYSIGLAKFFTDSFKELTGDANA-IVEVAN 216 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 G++DFSA + + + D ++ G + E +++QAR +G+ T +G + Sbjct: 217 YQTGDQDFSAQLLNISNKKPDVIFAPGNFTESALIIQQARQLGIDTPIIGGDTWETPEFI 276 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADK----KDPSGPYVWITYAAVQSLATA 313 I +A EG +++ + P + L+A + K+P+ + Y A + A Sbjct: 277 EIGKEAVEGTVLST-FFTSETPITKESEKFLEAYRNKYGKEPAA-VTALGYDAYLLILDA 334 Query: 314 LERTGSD--EPL--ALVKDLKANGANTVIGPLNWDEKGD 348 +ER G+ +PL A+ + GA VI DE GD Sbjct: 335 IERAGTTDYDPLKNAIAQTKNFEGAAGVI---TLDENGD 370 >UniRef50_A1W9P5 Extracellular ligand-binding receptor n=3 Tax=Comamonadaceae RepID=A1W9P5_ACISJ Length = 392 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 98/374 (26%), Positives = 165/374 (44%), Gaps = 23/374 (6%) Query: 1 MKRNAKTIIAGMIALAIS-----HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 +KR + G+ AL + + + D IK+ V +SGP+A G NG + A+ + Sbjct: 11 IKRRGFSASLGLAALGVGGWITGCSKVPDTIKIGVAQPLSGPLAGLGQDLLNGVKLAVDE 70 Query: 56 INAKGGIKGDKLVGVEY---DDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIY 112 IN G K V +E DD D A A +++ G+ VIGHL S + + IY Sbjct: 71 INRSGLNVDGKRVTLEVVAQDDRADAASGKAAAQQLLESGVVAVIGHLNSGVSLETAPIY 130 Query: 113 EDEGI--LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK 170 + + L+IS TNP +TQ G R D+ Q + + A++ D Sbjct: 131 AAKEVPQLIIS---TNPRITQLGLATTFRIVANDNLQARAIGAFAAAQLNADAYAVVDDG 187 Query: 171 QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 YG+GLA L AA ++ F+ L RLK+ + + + Sbjct: 188 SPYGKGLAEGAAAQLLAAKKHIAVRQSFDDKTVAFAELAGRLKEAQVRVIVCMLNDFQAL 247 Query: 231 QMLRQARSVGL-KTQFMGPEGVGNASLSNIAGDAAEGMLVTMP--KRYDQDPANQGIVDA 287 +L++ + +G + +G + V A ++ G +G+ T P + Q + Sbjct: 248 ALLQELQKLGHSRVALLGGDLVKTADMAKGMG-VIDGIYATSPVLDVAEFTTGRQFLEKY 306 Query: 288 LKADKKDPS--GPYVWITYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNWD 344 + A +K P+ G Y TY AV ++ A+++ GS P + + L+ NG V G + WD Sbjct: 307 IAAFQKPPAYGGHY---TYDAVYVVSEAIKKAGSAAPADITRALRGINGYAPVTGTMAWD 363 Query: 345 EKGDLKGFDFGVFQ 358 +G+L+ GV++ Sbjct: 364 GQGELRYGAVGVYE 377 >UniRef50_A7HAB6 Extracellular ligand-binding receptor n=8 Tax=Bacteria RepID=A7HAB6_ANADF Length = 402 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 6/224 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ + +++GP A G+ NG A++D+ KG + ++ DD P+ +++ Sbjct: 44 VKIGFINSITGPEAPIGENLTNGVDMAVEDLKKKG----VNVQLIKQDDTGKPQVSMSAM 99 Query: 86 NKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 ++ D + V+G S++ + + + + P A E+T++GY + R Sbjct: 100 EQLATGDEVAAVVGPYTSATANAVAKLANQYKVPQVVPAAAKEEITRQGYDWVFRLNAPA 159 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 + LE KP+ IA I++ +G +A + +D + VV + G D Sbjct: 160 HQYAQSLLDAALEFGKPKTIAFIYESTDFGTSVATAGKDYAQKKGLKVVGDEAYQKGAPD 219 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ-FMG 247 + + + ++K N D V+ Y + ++RQ+R VGLK Q F+G Sbjct: 220 YRSTLTKVKAANPDLVFMVSYVADAILLMRQSREVGLKPQAFLG 263 >UniRef50_A1WEM5 Extracellular ligand-binding receptor n=2 Tax=Comamonadaceae RepID=A1WEM5_VEREI Length = 401 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/308 (25%), Positives = 134/308 (43%), Gaps = 8/308 (2%) Query: 22 MADDIKVAVVGAMSGP-IAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 +A DIK+ + MS A++G GA+QA +DINA GG+ G L V DD P + Sbjct: 28 LAQDIKIGYISDMSASGAAEFGLGALWGAQQAAQDINAAGGVLGRPLAIVARDDMAQPPK 87 Query: 81 AV-AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR----GYQ 135 A+ V + ++ + +IG S + + + + I +ISP AT ++T+R G Sbjct: 88 AIQGVTELLDSEKVVALIGSANSGNVLAWLHLPQQKKIPVISPIATATDITKRFESSGEN 147 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 +I R + +D Q Y ++ K ++IA + D YG+ + + LK + V Sbjct: 148 YIFRVSMVDRDQIALLVAYAVKATKNKKIAFLADSTGYGQQGMKDLLAVLKLHALDPVAQ 207 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 + + D ++ ++++K D + G +LR V +G G N Sbjct: 208 EKFGGKDTDMTSQLSKIKAAGADTLIIYGLADANAYVLRSMEKVNYFPVTLGAWGNINTP 267 Query: 256 LSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWI--TYAAVQSLATA 313 L +AG A L+ ++A DK +V Y AV LATA Sbjct: 268 LLQLAGPALAAKLIFTASSTATSTPKAAALNARLLDKHPKMTAFVTAAQAYDAVLLLATA 327 Query: 314 LERTGSDE 321 ++ GS + Sbjct: 328 MKAAGSTQ 335 >UniRef50_B0UEJ1 Extracellular ligand-binding receptor n=3 Tax=Rhizobiales RepID=B0UEJ1_METS4 Length = 378 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/357 (22%), Positives = 162/357 (45%), Gaps = 15/357 (4%) Query: 6 KTIIAGMIALAISHTAMA-------DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 ++++ GM A A+ A+A +K+ + ++GP +++G G A+ +IN Sbjct: 2 RSLMKGMTAAAMLLGAVAGAGAQDKSPVKLGAIEILTGPNSRYGVAIQRGFDLALAEINR 61 Query: 59 KGGIKGDKLVGVEYDDACDPK-QAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEG 116 GG+ G + + + Y+D+ K QA+ A K++ D + ++G S+ A + + Sbjct: 62 NGGVLGGRPLALAYEDSAGAKEQALNAARKLIGRDKVPLILGPTLSNEMFAAGPVANERK 121 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH-DKQQYGE 175 + ++ T +T G ++ RT+ ++ P + E +R+A+++ + + + Sbjct: 122 VPIVGTSTTANGITAIG-PYVFRTSLPEADVIPVTLRTAKEKFGVKRVAVMYGNDDAFTK 180 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 ++ GL+ + + + + DFSA + ++K N D + + Q Sbjct: 181 SAYDVMKAGLEKLGIETLTTETFGSKDTDFSAQLTKIKGLNPDAIVLSALVEAASGIALQ 240 Query: 236 ARSVGL--KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKAD- 291 AR +G+ K +G G+ + L IAG AA+G +V P +DPANQ V A + Sbjct: 241 ARQLGIDPKVFIIGGNGLNSPKLGEIAGAAADGTIVGSPWFVGKKDPANQAFVAAFREKY 300 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 D + Y + +A A++ G+ + + L + V+GP ++ E D Sbjct: 301 SGDSPDQFAAQAYDTLFIVAKAIDAAGAPDSEKIKDALIKVKHSGVMGPFSFSESRD 357 >UniRef50_A5D536 ABC-type branched-chain amino acid transport systems, periplasmic component n=2 Tax=Bacteria RepID=A5D536_PELTS Length = 407 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/346 (21%), Positives = 150/346 (43%), Gaps = 41/346 (11%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA--KGGIKGDKLVGVEYDDACDPKQA 81 +++KV V+ ++G A +G+ME N A++++ A K I G ++ + DD A Sbjct: 34 EEVKVGVILPLTGSEAMFGEMEKNSFEMALEELKAAGKAAIGGKEIKLLFEDDQGKQDVA 93 Query: 82 VAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 + A K+VN D + + G S+ + + + I + ++ ++T++G+Q + R Sbjct: 94 KSAAEKLVNQDKVVMLTGGYSSACSNVIAGSAQAMNIPFLVVTGSSDDITKKGWQWVFRG 153 Query: 141 AGLDSSQGPTAAKYILE-TVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 A +S+ A ++E VKP+ +A+I++ +G A++ + + N+VF Sbjct: 154 AAAPASKYTGALWDMIEKVVKPKNVALIYENTDFGTSSAKAFRADCEKRGINLVFDQAYE 213 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ-FMG----------P 248 G DF ++A ++ N D ++ Y + + +Q + + F+G Sbjct: 214 HGAIDFKPMLANMRSTNPDMIFAVSYVMDAAMITKQMKELDFNVNLFVGGGAGYTMPEFK 273 Query: 249 EGVGNAS---------LSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPY 299 E G+AS + N+A A ++Y ++P G Sbjct: 274 ENAGSASEYVASTTLWVPNVAWPGASDYFNKYKQKYGKEPDYHGAQ-------------- 319 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDE 345 YA + +A AL R + K LK T++GP+ +++ Sbjct: 320 ---AYATMYIIADALSRAKELTNTGIQKALKETDMMTIMGPVKFED 362 >UniRef50_A7HUK3 Extracellular ligand-binding receptor n=6 Tax=Alphaproteobacteria RepID=A7HUK3_PARL1 Length = 403 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/364 (24%), Positives = 150/364 (41%), Gaps = 18/364 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGA---MSGPIAQWGDMEFNGARQAIKDIN 57 MKR A ++ G AL + A A++I +GA ++G + G NG A+K IN Sbjct: 1 MKRVAASLFLGT-ALLWAGAAPAEEIGTIRLGAAVSLTGKYSSNGAFTRNGYDLAVKRIN 59 Query: 58 AKGGI----KGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIY 112 +GG+ K L + YDD P + + +++ DG+KY++G S T+ + + Sbjct: 60 EEGGVTVAGKRYNLAVIYYDDESTPARGAQLVERLIQQDGVKYLLGPYSSGLTEAIAPVT 119 Query: 113 EDEGILMISPGATNPELTQRGYQH---IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD 169 E G+ M+ L ++GY++ ++ T A + E R+A+ + Sbjct: 120 EKYGVPMVEANGAAVSLFRKGYRYLFAVLSTTDQYLRGAVELAASVNEDPSKLRVAMAFE 179 Query: 170 KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEM 229 + + + V + +V D + D SA +++ K D + G+ Sbjct: 180 NDPFSQDVREGVMEDAAKFGMKIVIDDKLPPELNDMSATLSKAKVLKPDLLLVSGHDKGA 239 Query: 230 GQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLV-----TMPKRYDQDPANQGI 284 ++RQ + + +A ++ G AE L + K D + Sbjct: 240 ALVVRQLADQRVDVPMVAITHCDSAQIAEKFGKIAEYTLCAAQWASTLKYSDALFGSAAD 299 Query: 285 VDALKADKKDPSGPY-VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 AL + + PY + AAVQ A A ER GS EP A+ L T GP+ + Sbjct: 300 YAALYEETYGHAAPYQAAESSAAVQVFADAFERAGSLEPDAVRDALAETDIKTFYGPVKF 359 Query: 344 DEKG 347 DE G Sbjct: 360 DETG 363 >UniRef50_A4BI85 Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein (Fragment) n=1 Tax=Reinekea blandensis MED297 RepID=A4BI85_9GAMM Length = 231 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 9/173 (5%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI-KGDKLVGVEYDDAC-DPKQAV 82 ++K+ +G +GPI F GA+ A+ IN +GGI GD + D C D A Sbjct: 23 EVKIGFLGGFTGPIESLAPPIFEGAKVAVAQINTQGGILDGDIVTMPSADTTCVDASAAS 82 Query: 83 AVANKIVN-DGIKYVIGHLCSSST-QPASDIYEDEGILMISPGATNPELTQRGYQH-IMR 139 A++++N +G+ ++G LCS ST A+++ G+ M+SP +T+P LT + R Sbjct: 83 NGADRLINSEGVIGIVGALCSGSTIAAANNVGIPAGVPMVSPASTSPALTDMDDNDLVFR 142 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ---DGLKAAN 189 TA D+ QG AK +LE+ IAI + YG+G A +++ G +AN Sbjct: 143 TAPSDAFQGEMLAK-LLESKGIDEIAITYVNNDYGKGFADALEANFSGFVSAN 194 >UniRef50_C5T0A8 Extracellular ligand-binding receptor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0A8_ACIDE Length = 392 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 5/298 (1%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + +K+ V+ ++SG A +G E + + + NA+GG +G KL V +DD +P ++ Sbjct: 33 ESVKIGVLLSLSGAAATFGIPERDMVKVLAEKYNAEGGFRGRKLELVFHDDQTNPTESAR 92 Query: 84 VANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG--YQHIMRT 140 A K++ D + +IG S+ I + +++P T + + + RT Sbjct: 93 GATKLIQQDKVVVIIGPTIGSAALAVLPIAARAQVPVLTPVGTISVTAKENSFFPWVFRT 152 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 D + + + +R+A+++ + YG+ A + K +V A Sbjct: 153 CPNDELLVTASMETAVLKAGYKRLAVMYQEDAYGKNSAAFAEKFAKEHGIEIVSLASAPA 212 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMG-QMLRQARSVGLKTQFMGPEGVGNASLSNI 259 D SA R++ N D V P MG +R AR VGL +G + S Sbjct: 213 AAVDLSATATRIRAANPDSVLLWTSTPAMGAAFVRAARQVGLNVPIIGSGALVQRSFIET 272 Query: 260 AGDAAEGMLVTMPKRYDQ-DPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 AG AAE + + +D P + + L+ + K PSG +T + +L AL + Sbjct: 273 AGSAAENVTILAFANWDDPSPKLKKLGALLRTNGKTPSGFGELLTATGMAALTAALAK 330 >UniRef50_A7ID05 Extracellular ligand-binding receptor n=5 Tax=Proteobacteria RepID=A7ID05_XANP2 Length = 386 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 3/236 (1%) Query: 20 TAMA-DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 TAMA D IK+ V ++G A G NGA+ A +INAKGG+ G K+ V D+ +P Sbjct: 20 TAMAADTIKIGVNEPLTGAFAASGTYVVNGAKIAADEINAKGGVLGKKIELVIEDNKSNP 79 Query: 79 KQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 +A +VA K++ +D + ++G SS T E+ + M+ +++ ++T G I Sbjct: 80 TEAASVAEKLITSDKVPVLMGSWGSSLTLATMPKLEEYQVPMLVETSSSGKITTSGNPFI 139 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 R + S + A + I + + +++ + +G G A LKA V + Sbjct: 140 FRISPPSSVEA-DAFEPIAKKLGLKKVDFLVINNDWGRGAAADFSKMLKANGVEVGLTET 198 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 + +D SA +++LK + D + ++ + +Q ++GLK + + G N Sbjct: 199 MDQSAQDMSAQLSKLKASDADTIMVTSAVDQLTLLFKQMAALGLKKRVITTGGSQN 254 >UniRef50_Q2YJA9 Leu/Ile/Val-binding protein homolog 5 n=41 Tax=Proteobacteria RepID=LIVB5_BRUA2 Length = 406 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 84/358 (23%), Positives = 160/358 (44%), Gaps = 22/358 (6%) Query: 9 IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGD--- 65 +AG+ + IS A D I + +SGP+A G + I INA GG+K D Sbjct: 17 VAGLSLMTISAKA-EDVITLGASVQLSGPVANTGRYYQDAYNITIDKINAAGGVKVDGKP 75 Query: 66 -KLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 KL YD+ + +V ++V D + +++G S+ S I E I M+ G Sbjct: 76 YKLALKIYDNQSNVNLSVRQYTQLVTTDKVNFLLGPFASNFALADSVISEKYRIPMVQGG 135 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQ--RIAIIHDKQQYGEGLARSV 181 + E+ R +++I T S+ + + +L+ + P+ +A+++ + +A Sbjct: 136 GASDEIYSRNFKYIFGTLAPASNYFGSTVE-MLKGLDPKVTNVALVYADDSFDVSVADGT 194 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + LK A + + DF++LI+++K +N+D V G+ E+ +RQ++S+ Sbjct: 195 RKLLKDAGFTIAADEKFATNSTDFTSLISQIKSKNVDAVLVAGHETEVLNFVRQSKSLAF 254 Query: 242 KTQFMG-PEGVGNASLSNIAG---DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSG 297 + GV G + A GM +P D ++ DA K + + + Sbjct: 255 DPKLYSFTVGVPTEDFRKALGKDANYAFGMTAWLPS---ADLKDRWFGDAAKFETEYKAR 311 Query: 298 PYVWITYAA------VQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDL 349 Y A V++ A A+E+ S +P + L + +++ GP+ +D++G + Sbjct: 312 FNYEPDYHAASGASDVEAFAEAIEKANSLDPQKVRDALASIKFDSLYGPIAFDKQGQI 369 >UniRef50_A6X7H9 Extracellular ligand-binding receptor n=3 Tax=Alphaproteobacteria RepID=A6X7H9_OCHA4 Length = 384 Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 7/256 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK K +I A++ A+A+D+ + + A +G +A + G + A+ +INA G Sbjct: 1 MKTTLKALILSTALGALAFPALAEDLAIGLATAQTGALAPYDQPSLKGLQMAVDEINAAG 60 Query: 61 GIKGD---KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGI 117 GI G KL+ D D Q VA ++V++GIK +I + + A I + I Sbjct: 61 GIAGKFPIKLIA--KDTRSDAAQTALVAQELVDEGIKILITPCDADPSIAAGQITQAAQI 118 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 S AT P + ++ D+ Q A Y E + Y L Sbjct: 119 PTFSFCATTPTMPLAVGDYMFGNYPADNVQAAVLANYAKEKGFKTAYVLKSPDTAYTLKL 178 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKEN--IDFVYYGGYYPEMGQMLRQ 235 K V+ + G++DFSA + ++K N D + Y P+ +RQ Sbjct: 179 PEYFATSFKGKGGEVIGEGTYSMGQQDFSAEVTKIKALNPAPDVIMTAAYEPDFPAFIRQ 238 Query: 236 ARSVGLKTQFMGPEGV 251 R G+ T +G +G+ Sbjct: 239 LRGAGVTTPILGSDGI 254 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P04816 Leucine-specific-binding protein n=310 Tax=Prote... 467 e-130 UniRef50_Q399U6 ABC branched chain amino acid family transporter... 367 e-100 UniRef50_A8IDI7 Amino acid ABC transporter substrate binding pro... 357 4e-97 UniRef50_A1WJ16 Extracellular ligand-binding receptor n=2 Tax=Pr... 347 3e-94 UniRef50_B8J0V3 Extracellular ligand-binding receptor n=1 Tax=De... 343 5e-93 UniRef50_Q2YLF8 Leu/Ile/Val-binding protein homolog 1 n=80 Tax=P... 343 6e-93 UniRef50_B5YDP1 Branched chain amino acid ABC transporter n=2 Ta... 342 1e-92 UniRef50_A4JSR3 Extracellular ligand-binding receptor n=11 Tax=c... 339 1e-91 UniRef50_A6M3G8 Extracellular ligand-binding receptor n=3 Tax=Cl... 337 5e-91 UniRef50_Q3A9Y7 High affinity branched-chain amino acid ABC tran... 336 8e-91 UniRef50_B2JSU3 Extracellular ligand-binding receptor n=2 Tax=Bu... 335 2e-90 UniRef50_A5TY68 Branched chain amino acid ABC superfamily ATP bi... 331 2e-89 UniRef50_Q11D26 Extracellular ligand-binding receptor n=3 Tax=Al... 329 1e-88 UniRef50_Q8G3D4 Leu/Ile/Val-binding protein homolog 3 n=53 Tax=R... 327 4e-88 UniRef50_Q2YLG0 Leu/Ile/Val-binding protein homolog 2 n=42 Tax=B... 327 5e-88 UniRef50_A6LX40 Extracellular ligand-binding receptor n=3 Tax=Cl... 326 1e-87 UniRef50_B1ZYR7 Extracellular ligand-binding receptor n=3 Tax=Ve... 325 2e-87 UniRef50_D0LYK9 Extracellular ligand-binding receptor n=4 Tax=Pr... 325 2e-87 UniRef50_Q3JQA3 Periplasmic ligand binding lipoprotein n=74 Tax=... 323 5e-87 UniRef50_C6JQZ8 Leucine-, isoleucine-, valine-, threonine-, and ... 323 7e-87 UniRef50_B4UJL7 Extracellular ligand-binding receptor n=12 Tax=B... 323 8e-87 UniRef50_D2RMU5 Extracellular ligand-binding receptor n=5 Tax=Ve... 322 2e-86 UniRef50_C9KMT7 Branched-chain amino acid ABC transporter, amino... 322 2e-86 UniRef50_B9Z602 Extracellular ligand-binding receptor n=1 Tax=Lu... 321 3e-86 UniRef50_A1KBY9 Probable leucine-specific binding protein n=2 Ta... 320 3e-86 UniRef50_Q316T7 Amino acid ABC transporter, periplasmic-binding ... 320 7e-86 UniRef50_A4XM95 Extracellular ligand-binding receptor n=4 Tax=Cl... 317 3e-85 UniRef50_B6WPS4 Putative uncharacterized protein n=1 Tax=Desulfo... 317 4e-85 UniRef50_C2CF86 Branched chain amino acid ABC superfamily ATP bi... 317 4e-85 UniRef50_Q4G268 HmgD n=1 Tax=Pseudomonas putida RepID=Q4G268_PSEPU 315 2e-84 UniRef50_D1C9L8 Extracellular ligand-binding receptor n=1 Tax=Sp... 315 2e-84 UniRef50_C7HSH7 Branched-chain amino acid ABC superfamily ATP bi... 314 3e-84 UniRef50_Q7NI31 Glr2353 protein n=1 Tax=Gloeobacter violaceus Re... 314 4e-84 UniRef50_B1L6B9 ABC-type branched-chain amino acid transport sys... 314 4e-84 UniRef50_Q39HK1 ABC branched chain amino acid family transporter... 313 6e-84 UniRef50_Q92ZZ6 ABC transporter, periplasmic solute-binding prot... 313 6e-84 UniRef50_A1HU78 Extracellular ligand-binding receptor n=1 Tax=Th... 313 7e-84 UniRef50_Q2RFK5 Extracellular ligand-binding receptor n=3 Tax=Cl... 313 7e-84 UniRef50_A5HYZ7 Branched-chain amino acid transport system,subst... 312 9e-84 UniRef50_B5WAG3 Extracellular ligand-binding receptor n=2 Tax=Bu... 311 2e-83 UniRef50_Q985D9 ABC transporter, binding protein n=2 Tax=Mesorhi... 311 3e-83 UniRef50_D1B6I2 Extracellular ligand-binding receptor n=2 Tax=Sy... 310 4e-83 UniRef50_Q2RSC4 Extracellular ligand-binding receptor n=1 Tax=Rh... 310 4e-83 UniRef50_B8FN98 Extracellular ligand-binding receptor n=12 Tax=B... 310 5e-83 UniRef50_B2JW90 Extracellular ligand-binding receptor n=1 Tax=Bu... 309 9e-83 UniRef50_A3RVH7 Leucine-, isoleucine-, valine-, threonine-, and ... 309 1e-82 UniRef50_Q47JF2 Extracellular ligand-binding receptor n=142 Tax=... 309 1e-82 UniRef50_B6ISN6 Leucine-, isoleucine-, valine-, threonine-, and ... 309 1e-82 UniRef50_A0B322 Extracellular ligand-binding receptor n=3 Tax=Bu... 308 2e-82 UniRef50_B1HNQ1 Branched chain amino acid ABC transporter (Subst... 308 2e-82 UniRef50_Q141F0 ABC branched chain amino acid family transporter... 308 3e-82 UniRef50_A8U523 Putative ABC transporter, branched chain amino a... 307 3e-82 UniRef50_C7RS11 Extracellular ligand-binding receptor n=1 Tax=Ca... 307 4e-82 UniRef50_C6J274 Branched-chain amino acid transport system,subst... 307 6e-82 UniRef50_Q13IE6 ABC branched chain amino acid family transporter... 306 1e-81 UniRef50_A9BYU2 Extracellular ligand-binding receptor n=2 Tax=Co... 305 1e-81 UniRef50_D1B9T5 Extracellular ligand-binding receptor n=2 Tax=Sy... 305 2e-81 UniRef50_A5N0V5 LivK n=2 Tax=Clostridium kluyveri RepID=A5N0V5_C... 304 3e-81 UniRef50_C4FV28 Putative uncharacterized protein n=1 Tax=Catonel... 303 6e-81 UniRef50_D1U8G6 Extracellular ligand-binding receptor n=2 Tax=De... 303 6e-81 UniRef50_C6BVT9 Extracellular ligand-binding receptor n=3 Tax=De... 302 1e-80 UniRef50_B8J3K0 Extracellular ligand-binding receptor n=10 Tax=D... 302 1e-80 UniRef50_Q39AQ6 ABC branched chain amino acid family transporter... 302 2e-80 UniRef50_C0CMD4 Putative uncharacterized protein n=1 Tax=Blautia... 302 2e-80 UniRef50_B0TD42 Branched chain amino acid abc transporter, amino... 301 2e-80 UniRef50_Q0ATW1 Branched chain amino acid ABC transporter (Subst... 301 2e-80 UniRef50_B9Z072 Extracellular ligand-binding receptor n=2 Tax=Ch... 299 9e-80 UniRef50_Q5SIN9 Branched-chain amino acid ABC transporter, perip... 299 1e-79 UniRef50_C4XSP4 ABC transporter substrate binding protein n=1 Ta... 299 1e-79 UniRef50_C7HZL2 Extracellular ligand-binding receptor n=2 Tax=Th... 297 4e-79 UniRef50_C0GH32 Extracellular ligand-binding receptor n=1 Tax=De... 297 4e-79 UniRef50_D1ALD8 Extracellular ligand-binding receptor n=6 Tax=Fu... 297 4e-79 UniRef50_B1I4I1 Extracellular ligand-binding receptor n=4 Tax=Cl... 297 5e-79 UniRef50_A6TPW6 Extracellular ligand-binding receptor n=1 Tax=Al... 297 6e-79 UniRef50_A1TSM1 Extracellular ligand-binding receptor n=2 Tax=Ac... 296 1e-78 UniRef50_C1TP01 Amino acid/amide ABC transporter substrate-bindi... 295 2e-78 UniRef50_D2L0G3 Extracellular ligand-binding receptor n=1 Tax=De... 295 2e-78 UniRef50_A6T359 ABC-type branched-chain amino acid transport sys... 294 3e-78 UniRef50_Q12GM8 Extracellular ligand-binding receptor n=1 Tax=Po... 294 5e-78 UniRef50_B7AA03 Extracellular ligand-binding receptor n=3 Tax=Th... 293 6e-78 UniRef50_A5IN43 Extracellular ligand-binding receptor n=9 Tax=Th... 292 1e-77 UniRef50_A4J594 Extracellular ligand-binding receptor n=2 Tax=Ba... 292 1e-77 UniRef50_Q67LV0 Branched chain amino acid ABC transporter substr... 292 1e-77 UniRef50_C9R8F6 Extracellular ligand-binding receptor n=1 Tax=Am... 292 2e-77 UniRef50_A0LKN6 Extracellular ligand-binding receptor n=1 Tax=Sy... 291 3e-77 UniRef50_A1WEQ0 Extracellular ligand-binding receptor n=1 Tax=Ve... 290 4e-77 UniRef50_B8GBD0 Extracellular ligand-binding receptor n=5 Tax=Ch... 290 6e-77 UniRef50_A5CZP1 ABC-type branched-chain amino acid transport sys... 288 2e-76 UniRef50_Q9AQ31 40kDa leucine-binding transmembrane protein n=3 ... 287 3e-76 UniRef50_D1B6L8 Extracellular ligand-binding receptor n=1 Tax=Th... 287 5e-76 UniRef50_A9AXZ7 Extracellular ligand-binding receptor n=1 Tax=He... 286 1e-75 UniRef50_A4JTH7 Extracellular ligand-binding receptor n=3 Tax=Bu... 286 1e-75 UniRef50_Q3JSD7 Outative extracellular ligand binding protein n=... 285 1e-75 UniRef50_D2AV85 ABC-type branched-chain amino acid transport sys... 285 2e-75 UniRef50_A9BM94 Extracellular ligand-binding receptor n=15 Tax=C... 285 2e-75 UniRef50_B9Y8T3 Putative uncharacterized protein n=1 Tax=Holdema... 285 2e-75 UniRef50_C8SVY2 Extracellular ligand-binding receptor n=1 Tax=Me... 285 2e-75 UniRef50_A9IHL6 Putative binding-protein-dependent transport pro... 284 3e-75 UniRef50_C9ACC1 Branched-chain amino acid transporter n=3 Tax=En... 284 3e-75 UniRef50_B8IZP5 Extracellular ligand-binding receptor n=9 Tax=Ba... 283 5e-75 UniRef50_C8X2A2 Extracellular ligand-binding receptor n=1 Tax=De... 283 5e-75 UniRef50_D0BNJ8 Branched-chain amino acid ABC transporter amino ... 283 5e-75 UniRef50_B9JHQ3 ABC transporter substrate-binding protein n=7 Ta... 282 1e-74 UniRef50_C5CRE7 Extracellular ligand-binding receptor n=27 Tax=B... 282 2e-74 UniRef50_A5FZN6 Extracellular ligand-binding receptor n=1 Tax=Ac... 281 2e-74 UniRef50_A5FVF3 Extracellular ligand-binding receptor n=5 Tax=Ba... 281 2e-74 UniRef50_Q2JNB6 Hydrophobic amino acid ABC transporter (HAAT) fa... 281 4e-74 UniRef50_B8FGX7 Extracellular ligand-binding receptor n=3 Tax=De... 279 1e-73 UniRef50_C5ELH4 Predicted protein n=1 Tax=Clostridiales bacteriu... 279 1e-73 UniRef50_Q0AV49 Branched-chain amino acid ABC transporter, perip... 278 2e-73 UniRef50_A8MJQ2 Extracellular ligand-binding receptor n=6 Tax=Ba... 278 2e-73 UniRef50_B4SCM8 Extracellular ligand-binding receptor n=1 Tax=Pe... 278 2e-73 UniRef50_Q1MR26 Branched chain amino acid ABC transporter, perip... 278 3e-73 UniRef50_B2T1G8 Extracellular ligand-binding receptor n=1 Tax=Bu... 277 3e-73 UniRef50_Q7WM42 Putative amino acid ABC transport system, substr... 277 4e-73 UniRef50_Q2RMX3 Extracellular ligand-binding receptor n=2 Tax=Ba... 277 4e-73 UniRef50_D1BLT9 Extracellular ligand-binding receptor n=4 Tax=Ve... 277 4e-73 UniRef50_Q13IR8 ABC branched chain amino acid family transporter... 277 5e-73 UniRef50_C5EHL3 Extracellular ligand-binding receptor n=4 Tax=Cl... 277 5e-73 UniRef50_C0CTG8 Putative uncharacterized protein n=1 Tax=Clostri... 276 8e-73 UniRef50_D2LDZ1 Extracellular ligand-binding receptor n=1 Tax=Rh... 276 1e-72 UniRef50_B0UEJ1 Extracellular ligand-binding receptor n=3 Tax=Rh... 275 1e-72 UniRef50_Q2IRP0 Extracellular ligand-binding receptor n=1 Tax=Rh... 274 4e-72 UniRef50_C2D7C9 Branched chain amino acid ABC superfamily ATP bi... 273 5e-72 UniRef50_C7NDV1 Extracellular ligand-binding receptor n=3 Tax=Le... 273 9e-72 UniRef50_A9KIM2 Extracellular ligand-binding receptor n=1 Tax=Cl... 273 9e-72 UniRef50_D2L0U6 Extracellular ligand-binding receptor n=1 Tax=De... 273 1e-71 UniRef50_A5CZK0 ABC-type branched-chain amino acid transport sys... 273 1e-71 UniRef50_A8IHA6 ABC-type branched-chain amino acid transport sys... 272 1e-71 UniRef50_Q2T506 Amino acid ABC transporter, periplasmic amino ac... 272 1e-71 UniRef50_D0D0C1 Extracellular ligand-binding receptor n=1 Tax=Ci... 272 2e-71 UniRef50_A8TTJ6 Branched-chain amino acid ABC transporter, amino... 272 2e-71 UniRef50_B5HG53 Extracellular ligand-binding receptor n=1 Tax=St... 272 2e-71 UniRef50_C9LQP4 Putative branched-chain amino acid ABC transport... 272 2e-71 UniRef50_B1C374 Putative uncharacterized protein n=2 Tax=Erysipe... 272 2e-71 UniRef50_B8IDJ0 Extracellular ligand-binding receptor n=4 Tax=Rh... 271 4e-71 UniRef50_C0QII0 LivK2 n=1 Tax=Desulfobacterium autotrophicum HRM... 270 7e-71 UniRef50_A9FT17 Branched-chain amino acid ABC transporter, amino... 269 1e-70 UniRef50_A9KNN4 Extracellular ligand-binding receptor n=4 Tax=Fi... 269 1e-70 UniRef50_B0PGR3 Putative uncharacterized protein n=1 Tax=Anaerot... 269 1e-70 UniRef50_A0LIW6 Extracellular ligand-binding receptor n=5 Tax=De... 268 2e-70 UniRef50_A9BJ64 Extracellular ligand-binding receptor n=2 Tax=Th... 267 4e-70 UniRef50_C4XNN1 Putative ABC transporter substrate binding prote... 267 5e-70 UniRef50_C0D1T2 Putative uncharacterized protein n=1 Tax=Clostri... 267 5e-70 UniRef50_Q03M75 ABC-type branched-chain amino acid transport sys... 267 6e-70 UniRef50_D2Q320 Extracellular ligand-binding receptor n=19 Tax=A... 267 6e-70 UniRef50_A8SAA0 Putative uncharacterized protein n=1 Tax=Faecali... 266 8e-70 UniRef50_C4XSR4 ABC transporter substrate binding protein n=1 Ta... 266 9e-70 UniRef50_B1LX36 Extracellular ligand-binding receptor n=11 Tax=A... 265 1e-69 UniRef50_C0Z9I1 ABC transporter substrate binding protein n=1 Ta... 265 2e-69 UniRef50_A8UX91 ABC transporter substrate-binding protein n=1 Ta... 265 3e-69 UniRef50_C7H459 High affinity branched-chain amino acid ABC tran... 264 4e-69 UniRef50_B8FK55 Extracellular ligand-binding receptor n=1 Tax=De... 264 4e-69 UniRef50_C8WA26 Extracellular ligand-binding receptor n=2 Tax=At... 264 4e-69 UniRef50_C0ZKD9 Probable branched-chain amino acid ABC transport... 263 6e-69 UniRef50_A8R9T6 Putative uncharacterized protein n=2 Tax=unclass... 263 6e-69 UniRef50_A1SHR8 Extracellular ligand-binding receptor n=1 Tax=No... 263 6e-69 UniRef50_C5EN81 Putative uncharacterized protein n=1 Tax=Clostri... 263 7e-69 UniRef50_B8DRY9 Extracellular ligand-binding receptor n=1 Tax=De... 263 8e-69 UniRef50_A7HAB6 Extracellular ligand-binding receptor n=8 Tax=Ba... 262 1e-68 UniRef50_A5CZW6 ABC-type branched-chain amino acid transport sys... 262 1e-68 UniRef50_A0LGK7 Extracellular ligand-binding receptor n=1 Tax=Sy... 262 2e-68 UniRef50_A5D536 ABC-type branched-chain amino acid transport sys... 261 3e-68 UniRef50_B9L7B1 High affinity branched-chain amino acid ABC tran... 260 4e-68 UniRef50_A1VTJ7 Extracellular ligand-binding receptor n=6 Tax=Bu... 260 5e-68 UniRef50_C0CV37 Putative uncharacterized protein n=1 Tax=Clostri... 260 8e-68 UniRef50_B3ENC9 Extracellular ligand-binding receptor n=1 Tax=Ch... 259 1e-67 UniRef50_C1CVB8 Putative branched chain amino acid ABC transport... 259 1e-67 UniRef50_Q7W0W5 Putative branched-chain amino acid-binding prote... 259 1e-67 UniRef50_UPI00016BFE10 Leucine-, isoleucine-, valine-, threonine... 258 2e-67 UniRef50_C8W363 Extracellular ligand-binding receptor n=1 Tax=De... 258 3e-67 UniRef50_B3W8M3 Branched-chain amino acid ABC transporter, subst... 255 2e-66 UniRef50_A1AQF9 Extracellular ligand-binding receptor n=1 Tax=Pe... 255 2e-66 UniRef50_Q5P917 Branched-chain amino acid ABC transporter, perip... 255 2e-66 UniRef50_Q21BI4 Extracellular ligand-binding receptor n=23 Tax=B... 255 3e-66 UniRef50_Q1IZ32 ABC-type branched-chain amino acid transport sys... 255 3e-66 UniRef50_B1Y595 Extracellular ligand-binding receptor n=10 Tax=P... 254 4e-66 UniRef50_A6WC82 Extracellular ligand-binding receptor n=1 Tax=Ki... 253 6e-66 UniRef50_C8VXD1 Extracellular ligand-binding receptor n=2 Tax=De... 253 1e-65 UniRef50_A1A0J1 Solute binding protein of ABC transporter for br... 253 1e-65 UniRef50_D2B8C1 Extracellular ligand-binding receptor n=2 Tax=St... 252 1e-65 UniRef50_A7ID05 Extracellular ligand-binding receptor n=5 Tax=Pr... 252 2e-65 UniRef50_B9L4C0 Branched-chain amino acid ABC transporter, perip... 252 2e-65 UniRef50_Q73K61 High-affinity branched chain amino acid ABC tran... 251 3e-65 UniRef50_A8KXL9 Extracellular ligand-binding receptor n=8 Tax=Fr... 251 3e-65 UniRef50_A6X7H9 Extracellular ligand-binding receptor n=3 Tax=Al... 251 3e-65 UniRef50_B6WW20 Putative uncharacterized protein n=1 Tax=Desulfo... 251 3e-65 UniRef50_D2L9D5 Extracellular ligand-binding receptor n=1 Tax=De... 251 3e-65 UniRef50_C2KVU8 Branched chain amino acid ABC superfamily ATP bi... 251 3e-65 UniRef50_Q9Y8W3 Branched-chain amino acid ABC transporter, branc... 251 4e-65 UniRef50_A7IE58 Extracellular ligand-binding receptor n=3 Tax=Pr... 250 4e-65 UniRef50_C6WB66 Extracellular ligand-binding receptor n=1 Tax=Ac... 250 4e-65 UniRef50_A1WRT6 Extracellular ligand-binding receptor n=1 Tax=Ve... 250 5e-65 UniRef50_B2UH58 Extracellular ligand-binding receptor n=8 Tax=Bu... 250 5e-65 UniRef50_C9NK09 Extracellular ligand-binding receptor n=3 Tax=St... 250 7e-65 UniRef50_C0Z561 ABC transporter substrate binding protein n=1 Ta... 250 7e-65 UniRef50_D1SZL8 Extracellular ligand-binding receptor n=2 Tax=Co... 249 1e-64 UniRef50_A0RN18 Branched-chain amino-acid ABC transport system p... 249 1e-64 UniRef50_A0LKN5 Extracellular ligand-binding receptor n=1 Tax=Sy... 249 1e-64 UniRef50_D2RFJ3 Extracellular ligand-binding receptor n=1 Tax=Ar... 249 1e-64 UniRef50_C4X495 ABC transport system periplasmic binding compone... 248 2e-64 UniRef50_B8FZ96 Extracellular ligand-binding receptor n=3 Tax=ce... 248 2e-64 UniRef50_Q2Y4K2 Putative amino acid ABC transporter, solute-bind... 248 3e-64 UniRef50_D1C6F1 Extracellular ligand-binding receptor n=1 Tax=Sp... 248 3e-64 UniRef50_A6UKD7 Extracellular ligand-binding receptor n=2 Tax=Si... 247 4e-64 UniRef50_D1U5A7 Extracellular ligand-binding receptor n=1 Tax=De... 247 5e-64 UniRef50_UPI0001B5404D ABC transporter ligand-binding protein n=... 247 7e-64 UniRef50_A7HUK3 Extracellular ligand-binding receptor n=6 Tax=Al... 247 7e-64 UniRef50_B3E1S6 Extracellular ligand-binding receptor n=18 Tax=D... 246 9e-64 UniRef50_Q6AL52 Related to branched-chain amino acid ABC transpo... 246 1e-63 UniRef50_C0QMD9 ABC-typ branched-chain amino acid transport syst... 246 1e-63 UniRef50_A8ZVT4 Extracellular ligand-binding receptor n=2 Tax=De... 245 1e-63 UniRef50_A0LQF9 Extracellular ligand-binding receptor n=1 Tax=Sy... 245 2e-63 UniRef50_Q1AZ39 Extracellular ligand-binding receptor n=1 Tax=Ru... 245 2e-63 UniRef50_A8S3J1 Putative uncharacterized protein n=1 Tax=Clostri... 245 2e-63 UniRef50_C5ET85 Extracellular ligand-binding receptor n=1 Tax=Cl... 245 2e-63 UniRef50_B9M5M6 Extracellular ligand-binding receptor n=1 Tax=Ge... 244 3e-63 UniRef50_C9S1R9 Extracellular ligand-binding receptor n=2 Tax=Ge... 243 5e-63 UniRef50_Q127P6 Extracellular ligand-binding receptor n=5 Tax=Pr... 243 9e-63 UniRef50_A4ISM5 Branched-chain amino acid ABC transporter n=6 Ta... 243 9e-63 UniRef50_Q0FY58 ABC transporter substrate-binding protein n=1 Ta... 243 1e-62 UniRef50_D2SCY2 Extracellular ligand-binding receptor n=1 Tax=Ge... 241 2e-62 UniRef50_A8S3D2 Putative uncharacterized protein n=1 Tax=Clostri... 241 2e-62 UniRef50_B7KWM3 Extracellular ligand-binding receptor n=9 Tax=Pr... 241 2e-62 UniRef50_A4XZ18 Extracellular ligand-binding receptor n=3 Tax=Ba... 241 2e-62 UniRef50_Q140M5 ABC branched chain amino acid family transporter... 241 3e-62 UniRef50_C4RKJ8 Extracellular ligand-binding receptor n=2 Tax=Mi... 241 3e-62 UniRef50_Q21B30 Extracellular ligand-binding receptor n=2 Tax=Al... 240 5e-62 UniRef50_Q7M8R4 ABC TRANSPORT SYSTEM PERIPLASMIC BINDING PROTEIN... 240 9e-62 UniRef50_B0TAM9 Branched-chain amino acid abc transporter, amino... 239 1e-61 UniRef50_C7RQ13 Extracellular ligand-binding receptor n=1 Tax=Ca... 239 1e-61 UniRef50_A1UHF2 Extracellular ligand-binding receptor n=9 Tax=Ac... 238 2e-61 UniRef50_B5YK45 Leu/ile/val-binding protein n=1 Tax=Thermodesulf... 238 2e-61 UniRef50_Q137Z6 Extracellular ligand-binding receptor n=1 Tax=Rh... 238 3e-61 UniRef50_Q2YJA9 Leu/Ile/Val-binding protein homolog 5 n=41 Tax=P... 238 3e-61 UniRef50_A1WPI8 Extracellular ligand-binding receptor n=3 Tax=Pr... 238 3e-61 UniRef50_B9JMP9 Amino acid ABC transporter n=3 Tax=Proteobacteri... 237 4e-61 UniRef50_A0NLZ5 Hydrophobic amino acid ABC transporter (HAAT) fa... 237 5e-61 UniRef50_Q7WPC4 Branched-chain amino acid ABC transporter, bindi... 237 5e-61 UniRef50_Q1AZK7 Extracellular ligand-binding receptor n=1 Tax=Ru... 237 5e-61 UniRef50_A8LXP7 Extracellular ligand-binding receptor n=3 Tax=Sa... 237 6e-61 UniRef50_A8UVG6 Putative branched-chain amino acid transporter s... 236 8e-61 UniRef50_D1CEZ7 Extracellular ligand-binding receptor n=1 Tax=Th... 236 1e-60 UniRef50_Q2J3V7 Extracellular ligand-binding receptor n=1 Tax=Rh... 235 1e-60 UniRef50_B8G0I4 Extracellular ligand-binding receptor n=18 Tax=B... 235 1e-60 UniRef50_C5EWJ8 Predicted protein n=1 Tax=Clostridiales bacteriu... 235 2e-60 UniRef50_Q7WED6 Putative leu/ile/val-binding protein n=2 Tax=Bor... 235 2e-60 UniRef50_A8F651 Extracellular ligand-binding receptor n=2 Tax=Th... 235 2e-60 Sequences not found previously or not previously below threshold: UniRef50_A0LQN2 Extracellular ligand-binding receptor n=1 Tax=Sy... 246 1e-63 UniRef50_D1C8R8 Extracellular ligand-binding receptor n=1 Tax=Sp... 237 6e-61 >UniRef50_P04816 Leucine-specific-binding protein n=310 Tax=Proteobacteria RepID=LIVK_ECOLI Length = 369 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 369/369 (100%), Positives = 369/369 (100%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG Sbjct: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI Sbjct: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS Sbjct: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG Sbjct: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV Sbjct: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH Sbjct: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 Query: 361 ADGSSTAAK 369 ADGSSTAAK Sbjct: 361 ADGSSTAAK 369 >UniRef50_Q399U6 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=59 Tax=Bacteria RepID=Q399U6_BURS3 Length = 399 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 181/347 (52%), Positives = 244/347 (70%), Gaps = 1/347 (0%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + +K+A+ G MSG +AQ+GDM GA AI+ INA GG G+K V DDAC+PKQAVA Sbjct: 53 ETVKIAIAGPMSGSVAQYGDMVKAGALTAIEQINAAGGAGGNKFEVVMMDDACEPKQAVA 112 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ-RGYQHIMRTAG 142 VANKIV+ IKYVIGH+CS ST PASDIYE+EGI+M++P AT P+LT+ + I RT G Sbjct: 113 VANKIVSQKIKYVIGHVCSGSTIPASDIYENEGIVMVTPSATAPQLTEGKKRHFIFRTIG 172 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D QGP AA YI+ VKP+++A++HDKQ YG+G+A SV+ L+AA VV F+GI AG+ Sbjct: 173 RDDQQGPAAAHYIINNVKPKKVAVLHDKQSYGQGIASSVKKDLEAAKIPVVLFEGINAGD 232 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 D+SA+I +LK + +DFVY+GGY+PEMG ++RQAR G+K FMGPEGVGN ++ IAG Sbjct: 233 SDYSAIITKLKSQGVDFVYFGGYHPEMGLLMRQAREQGVKATFMGPEGVGNKDVTAIAGP 292 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 A+EGMLVT+P + DPAN +V A K+DP+GP+ YAAV+ +A ++ + +P Sbjct: 293 ASEGMLVTLPADFSADPANAALVKAFADKKRDPNGPFQMPAYAAVKIIADSIAGAKTTDP 352 Query: 323 LALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + + +T IG + +D +GDLK F F V+ WH D + TAAK Sbjct: 353 TKVAAYMHKTTFDTPIGKVAYDAQGDLKAFKFVVYTWHKDATKTAAK 399 >UniRef50_A8IDI7 Amino acid ABC transporter substrate binding protein n=36 Tax=Alphaproteobacteria RepID=A8IDI7_AZOC5 Length = 403 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 146/341 (42%), Positives = 203/341 (59%), Gaps = 2/341 (0%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ V G M+GP A +G NG QA+ DINA GGI G K+ DDA P Q +VA Sbjct: 62 VKLGVAGPMTGPNAAFGAQLKNGVEQAVTDINASGGILGQKIQVFVGDDASTPAQGTSVA 121 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 NK ++DG+KYV+GH S + P S YE+ GIL I+P +TNP T+R ++ RT G D Sbjct: 122 NKFISDGVKYVVGHFNSGVSIPTSTNYEEGGILQITPASTNPTFTERKLWNVFRTCGRDD 181 Query: 146 SQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDF 205 QG A +YIL+ +K ++IAI+HDK YG+GLA Q + V ++GIT GEKD+ Sbjct: 182 QQGAVAGEYILKNLKDKKIAIVHDKTPYGKGLADETQKAINKGGVKEVVYEGITPGEKDY 241 Query: 206 SALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAE 265 SAL+++LK ++ +YYGG +PE G ++RQ R G+KT +G+ + IAG AE Sbjct: 242 SALVSKLKAAGVEVLYYGGLHPEAGLLVRQMRDQGMKTVLFSGDGITDKEYWTIAGPGAE 301 Query: 266 GMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLAL 325 G L+T ++ A + +VD KA DP G YV +YAAVQ + A E T S +P + Sbjct: 302 GTLMTFGPDPRKNAAAKEVVDRFKAKGIDPEG-YVLYSYAAVQIIKQAAEATKSLDPKKV 360 Query: 326 VKDLK-ANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 + NTV+GPL +D+KGDL D+ V+ W G S Sbjct: 361 ADYMHSGATFNTVLGPLAFDKKGDLTKLDYVVYVWKDGGYS 401 >UniRef50_A1WJ16 Extracellular ligand-binding receptor n=2 Tax=Proteobacteria RepID=A1WJ16_VEREI Length = 358 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 179/356 (50%), Positives = 242/356 (67%), Gaps = 1/356 (0%) Query: 13 IALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY 72 + +A A +++A+ G MSG +AQ+GDM G AI+ INA G G KL V Sbjct: 1 MLAIFGLSAQAQTVQIAIAGPMSGSVAQYGDMVKAGVLTAIEQINAAGAAGGHKLEAVMM 60 Query: 73 DDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ- 131 DDAC+PKQAVAVANKIV+ IKYVIGH+CS ST PASDIYE+EGI+M++P AT P++T+ Sbjct: 61 DDACEPKQAVAVANKIVSQRIKYVIGHMCSGSTIPASDIYENEGIVMVTPSATVPQITEG 120 Query: 132 RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANAN 191 + + I RT G D QGP AA++I+ V+P ++A++HDKQ YG+GLA SV+ L A Sbjct: 121 KKRKFIFRTTGRDDQQGPVAARHIIAKVQPGKVAVLHDKQSYGQGLATSVKKVLDEAKVP 180 Query: 192 VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV 251 VV F+G+ AG+ D+SA+I ++K + DFVY+GGY+PEMG +LRQAR G+K FMGPEGV Sbjct: 181 VVLFEGVNAGDSDYSAVITKIKAQGADFVYFGGYHPEMGLLLRQAREQGVKATFMGPEGV 240 Query: 252 GNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 GN ++ IAG A+EGMLVT+P + +DPAN +V A K+D +GP+ YAAV+ +A Sbjct: 241 GNKDVTAIAGPASEGMLVTLPADFSEDPANAALVKAFADKKRDINGPFQLPAYAAVKIIA 300 Query: 312 TALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 A+ T S +P + + N T IG + +D +GDLK F F VF WH D + TA Sbjct: 301 DAMAGTKSADPAKVAAYMHQNAFQTPIGKVEYDAQGDLKSFKFVVFTWHKDATKTA 356 >UniRef50_B8J0V3 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0V3_DESDA Length = 376 Score = 343 bits (881), Expect = 5e-93, Method: Composition-based stats. Identities = 119/368 (32%), Positives = 196/368 (53%), Gaps = 3/368 (0%) Query: 1 MKRNAKTIIAGMIALAISHTAMA-DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK+ + A + ++ A A D IK+ V GA SG +A +G N A+ I D+NAK Sbjct: 1 MKKGITLLAAMALCAVLAAPAQAEDTIKIGVAGAHSGDLASYGVPSLNAAKVVIADVNAK 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GGI G ++ V DD C P+ A A K+++D + V+GH+CS +T+ +Y D I+ Sbjct: 61 GGILGKQVELVAQDDQCKPELATNAATKLISDKVAVVMGHICSGATKATLPLYTDAKIVS 120 Query: 120 ISPGATNPELTQRGY-QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 +SP AT P LT+ G + RT D +Q + ++L +K +++A +HD YG+G Sbjct: 121 MSPSATTPGLTEDGNNPYFFRTIANDKAQARLTSDFMLNNLKVKKVAYLHDNGDYGKGFV 180 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + ++ L+ A V F+ IT DFSA++ +L++E D V +GGY P ++L+Q R Sbjct: 181 DNNREHLEKAGVKTVLFEAITPDAVDFSAVVRKLRREQPDIVVFGGYQPTASKLLQQMRR 240 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP 298 + T +GP+G+ + + +AG A+EG+ + PK PA + + G Sbjct: 241 DRVTTALLGPDGLMDEAFIKMAGKASEGVYSSYPKDTSNLPAYRAAREGHVKMFGKDPGS 300 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 + + YAA Q+L A+E+ GS + +V L++ +T +G L + + GD G ++Q Sbjct: 301 FYYNGYAATQALVNAIEKAGSTDTAKVVDALRSAPVDTPLGTLTFSKTGDAAGMALSIYQ 360 Query: 359 WHADGSST 366 DG Sbjct: 361 VK-DGKFV 367 >UniRef50_Q2YLF8 Leu/Ile/Val-binding protein homolog 1 n=80 Tax=Proteobacteria RepID=LIVB1_BRUA2 Length = 371 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 152/370 (41%), Positives = 218/370 (58%), Gaps = 5/370 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M++ + +A +A +A AD + V + ++GP A +G GA AIK++N G Sbjct: 1 MRKTLFSGVALAAVIAFGGSAWAD-VLVGIGIPVTGPNAVYGAQIQKGAEAAIKEVNDAG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GI G+K+ DD DPKQ ++VANK DG+K+VIGH S T PAS +Y + GIL I Sbjct: 60 GINGEKIAITIGDDVSDPKQGISVANKFAADGVKFVIGHFNSGVTIPASQVYAENGILEI 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SPGATNP+ T++G + RT G D QG A +YI + K +IA+IHDK YG+GLA Sbjct: 120 SPGATNPQYTEQGLWNTFRTCGRDDQQGTVAGQYIFDHFKDAKIAVIHDKTPYGQGLADE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + L ++G+ GEKDFSALIA+LK+ ++ VY+GG +PE G ++RQ G Sbjct: 180 TKKKLNELGTKETLYEGVNVGEKDFSALIAKLKQAGVNVVYWGGMHPEAGLLIRQMADQG 239 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LK QF+ +G+ + L++IAGDA G++ T D AN ++ A + DK Y Sbjct: 240 LKAQFISGDGIVSNELASIAGDAVAGVMNTFGPDPRDDKANAELIKAFR-DKGFEPEAYT 298 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQW 359 +YAAVQSLA A + GS++P + K +K G TV+G L++DEKGD K + +++W Sbjct: 299 LYSYAAVQSLAQAAKAAGSNDPQEVAKAMKEKGPFKTVLGDLSYDEKGDPKLPGYVMYKW 358 Query: 360 H--ADGSSTA 367 ADG Sbjct: 359 EKGADGKYNY 368 >UniRef50_B5YDP1 Branched chain amino acid ABC transporter n=2 Tax=Dictyoglomus RepID=B5YDP1_DICT6 Length = 376 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 96/360 (26%), Positives = 170/360 (47%), Gaps = 7/360 (1%) Query: 1 MKRNAKTIIAGMI--ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 MKR K +I ++ +L + A IK+ + ++GP+A +G NGA+ A+++ NA Sbjct: 1 MKRFVKILIIALVIFSLFVLPLQAAGTIKIGGIFPITGPVATFGISCANGAKMAVEEANA 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 KGG+ G K+ + DD ++A A K++ D + ++G + SS I + + Sbjct: 61 KGGVLGSKIELIIEDDQYKLEEAANAARKLIERDKVVAIVGGVTSSEALTIGPIAQSSKV 120 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEG 176 ++++ ATNP++TQ G I R LD QG A + + +K + A++ Y +G Sbjct: 121 VLVTGTATNPKVTQVG-DFIFRVCFLDDFQGEVMANFAYKNLKAKTAAVLTAVTSDYSKG 179 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + + A +V + + G+ DF A + ++K DFV+ GYY ++ +L QA Sbjct: 180 LADAFKKKFTAIGGKIVADESYSEGDTDFRAQLTKIKALKPDFVFVPGYYSDVAPILNQA 239 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDP 295 R +G+ F G +G + L A AAEG + D +D Q V Sbjct: 240 RELGITVPFGGGDGWDSPELLKQAAKAAEGCFYSNHFTPDAKDLLVQTFVKNYTKKYGMA 299 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDF 354 + Y A++ L +++ GS +P+ + + L + V G + +D + F Sbjct: 300 PDALAALKYDAMKFLLEGIKKAGSADPVKIKEALASMKTFRGVTGSMTFDANRNPIKSAF 359 >UniRef50_A4JSR3 Extracellular ligand-binding receptor n=11 Tax=cellular organisms RepID=A4JSR3_BURVG Length = 383 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 119/369 (32%), Positives = 187/369 (50%), Gaps = 8/369 (2%) Query: 1 MKRNAKTIIAGMIALA----ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M R + + AL S A +K+ VG ++GP+A+ G GA+ A+ + Sbjct: 1 MNRRYWLLSLAVCALGTHMTSSRAADPQVVKIGFVGPLTGPVARVGKDLQYGAQLALDEE 60 Query: 57 NAKG-GIKGDKLVGV--EYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYE 113 NA+ I G + V DD DP+ A+ VA K+V+DG+ VIGH S + PAS +Y Sbjct: 61 NARHPTIGGKPVTFVLDVQDDQADPRVAIQVAQKLVDDGVVGVIGHYNSGCSIPASTVYH 120 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 + MI+PG+TNP+LT++GY+++ RT G D G A +++E +K +RI II D+ + Sbjct: 121 QANVAMITPGSTNPQLTKQGYKNVFRTMGHDGIGGVVAGHFVVEQMKAKRIGIIDDRTAF 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+GLA + + G+K AN VV + DF A++ LK +N+D +++GG + ++ Sbjct: 181 GQGLADAFEKGVKEANGYVVDREFTNDKAVDFRAILTTLKSKNVDLIFFGGLDEQGAMLV 240 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDALKADK 292 +Q RS+G+ Q G + + + IAG AA+G P D+ PA Q KA Sbjct: 241 KQMRSLGMPAQLFGAGALKSNAFLQIAGAAADGTQDLEPGPALDKLPAAQQFGKRYKARF 300 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 Y Y A +L A+ S + +V +L V G + +D GDL Sbjct: 301 NQDVELYAPFAYDAALALIKAIHSADSLDRGKIVDNLSKVTVTGVTGKITFDPYGDLIKP 360 Query: 353 DFGVFQWHA 361 + +FQ Sbjct: 361 PYTLFQVQQ 369 >UniRef50_A6M3G8 Extracellular ligand-binding receptor n=3 Tax=Clostridium RepID=A6M3G8_CLOB8 Length = 384 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 94/343 (27%), Positives = 168/343 (48%), Gaps = 3/343 (0%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 A T++AG + D IK+ +G +SG + +G GA+ K++N GGI Sbjct: 14 MAITLLAGCSGNSAGDGNNGDTIKIGAIGPLSGAASTYGVSVKEGAQLLEKEVNDAGGIN 73 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G K+ V DD DP ++ NK+V+D + ++G + S +T + + I MI+P Sbjct: 74 GKKIKFVFEDDQADPNSSMQAFNKLVDDEKVSAILGPVTSGATLAVAPNATSKQIPMITP 133 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSV 181 AT P +T+ G ++ R +DS QG AKY E + + A++++ Y +G+A S Sbjct: 134 TATEPTITKVGGDYMFRGCFVDSFQGEVLAKYASEKLGKKTAAVLYNSGSDYSKGIADSF 193 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + ++A V F + DF A + ++K N D + YY +G + +QAR +G+ Sbjct: 194 KSKFESAGGQVGEFLTYNDKDTDFKAQLTKIKSLNPDIIVLPDYYNVVGLIAKQARDMGI 253 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEG-MLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 +QF+G +G + L+ I G A +G + + D D + V++ K + + Sbjct: 254 TSQFLGGDGWESEELAKIGGKAVDGALYINHYYSGDSDENVKKFVESYKKEYNKEPDSFA 313 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 ++Y + L A+E+ G + A+ L + N+V G + + Sbjct: 314 ALSYDTSKILVKAIEKAGKTDGAAIKDALASMEMNSVTGNIKF 356 >UniRef50_Q3A9Y7 High affinity branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9Y7_CARHZ Length = 394 Score = 336 bits (862), Expect = 8e-91, Method: Composition-based stats. Identities = 108/356 (30%), Positives = 176/356 (49%), Gaps = 12/356 (3%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ V +SG +A +G NG A+ +INA GGI G KL ++YD+ D +A + Sbjct: 37 DVIKIGVNLELSGNVASFGQSALNGFTLALDEINAAGGINGKKLEIIKYDNKSDNTEAAS 96 Query: 84 VANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-----QRGYQHI 137 VA +++ D + + G + S +T +I E + +++ ATNP++T + +++ Sbjct: 97 VATRLITQDKVPIIFGAVTSGNTMAFINIAEANKVPVLTATATNPDVTVDPKTGKVREYV 156 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFD 196 RT +D QG AK+ E +K +R AI+ D Y GLA+ +G KA VV + Sbjct: 157 FRTCFIDPFQGTAMAKFATEELKVKRAAILKDNTSPYSVGLAKFFTEGFKAGGGEVVADE 216 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 T ++DF +++ ++K N DF+Y YY ++GQ+++QAR +G+ F G +G + L Sbjct: 217 NFTVNDQDFRSVLTKIKSLNPDFIYVPAYYEQVGQIVKQAREMGINVAFGGSDGWDSPKL 276 Query: 257 SNIAG-DAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 IAG DA + +T D DP + V K + + Y LA AL Sbjct: 277 IEIAGKDALKNCYITNHYSPDRDDPKVKEFVKKYKEKYGNVPDALAALGYDTGYVLAAAL 336 Query: 315 ERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + P A+ LK V G ++ DE+ + K + ++ DG T K Sbjct: 337 KNAKEITPEAIKDALKNVKDVEGVTGKISIDEQHNAK-KGLVILEFV-DGKQTYRK 390 >UniRef50_B2JSU3 Extracellular ligand-binding receptor n=2 Tax=Burkholderia RepID=B2JSU3_BURP8 Length = 382 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 8/369 (2%) Query: 1 MKRNAKTIIAGMIALA----ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M R + + ALA + A + +K+ VG ++GP+A+ G GA+ A+ + Sbjct: 1 MNRRTWLLRLAVCALAAQTSFAFAADPETVKIGFVGPLTGPVARVGKDLQYGAQLALDEE 60 Query: 57 NAK-GGIKGDKLVGV--EYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYE 113 NAK I G + V DD DP+ A+ VA K+V+DG+ VIGH S + PAS +Y Sbjct: 61 NAKQPTIAGKPVKFVLDVQDDQADPRVAIQVAQKLVDDGVVGVIGHYNSGCSIPASAVYH 120 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 + + MI+PG+TNP+LT++G++++ RT G D G A +++E +K +RI II D+ + Sbjct: 121 NANVAMITPGSTNPQLTKQGFKNVFRTMGHDGIGGVVAGHFVVEQMKAKRIGIIDDRTAF 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+GLA + + G+K AN N+V + DF A++ LK +N+D +++GG + ++ Sbjct: 181 GQGLADAFEKGVKEANGNIVSREFTNDKAVDFRAILTSLKSKNVDVIFFGGLDEQGAMLV 240 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDALKADK 292 +Q RS+G++ Q G + + + IAG + E P D+ PA Q KA Sbjct: 241 KQMRSLGMQAQLFGAGALKSNAFLQIAGASGERTQDLEPGPALDKLPAAQDFGKRYKARF 300 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 Y Y A ++ A+ S + +V+ L V G + +D GDL Sbjct: 301 NQDVELYAPFAYDAALAMIKAIHDANSLDRQKIVESLAKVSLTGVTGKITFDPYGDLIKP 360 Query: 353 DFGVFQWHA 361 + +F+ Sbjct: 361 PYTLFEVQQ 369 >UniRef50_A5TY68 Branched chain amino acid ABC superfamily ATP binding cassette transporter binding protein n=15 Tax=Bacteria RepID=A5TY68_FUSNP Length = 384 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 99/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%) Query: 1 MKRNAKTIIAGMIALAIS----------HTAMADDIKVAVVGAMSGPIAQWGDMEFNGAR 50 MK+ T + G + T A+ IK+ +G ++GP+A +G NG + Sbjct: 1 MKKKLLTTLLGASLFLAACGGEKAADKPATTKAETIKIGAIGPLTGPVAIYGISATNGLK 60 Query: 51 QAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASD 110 AI +INA GGI G ++ D+ D +AV NK+V+ G+ ++G + S T ++ Sbjct: 61 LAIDEINANGGILGKQVELNLLDEKGDSTEAVNAYNKLVDWGMVALVGDITSKPTVAVAE 120 Query: 111 IYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK 170 + +GI MI+P T +T+ G ++ R D QG AK+ E + + +AI+ + Sbjct: 121 VAAQDGIPMITPTGTQLNITEAG-SNVFRVCFTDPYQGEVLAKFAKEKLGAKTVAIMSNN 179 Query: 171 Q-QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEM 229 Y +G+A + + VV +G + G+KDF A + ++ ++N D ++ YY + Sbjct: 180 SSDYSDGVANAFVAEAEKQGVQVVAREGYSDGDKDFRAQLTKIAQQNPDVLFIPDYYEQD 239 Query: 230 GQMLRQARSVGLKTQFMGPEGV-GNASLSNIAGDAA-EGMLVTMPKRY-DQDPANQGIVD 286 G + QAR VGLK+ +G +G G + + AA E + D + Q + Sbjct: 240 GLIAIQAREVGLKSVIVGSDGWDGVVKTVDPSSYAAIEDVYFANHYSTKDSNEKIQNFIK 299 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEK 346 K D + ++Y L A+E+ G+ + A+ K +K + G L +DEK Sbjct: 300 NYKEKYNDEPSAFSALSYDTAYLLKAAIEKAGTTDKEAVTKAIKEIQFEGITGQLTFDEK 359 Query: 347 GDLKGFDFGVFQWHADGSS 365 + + + D + Sbjct: 360 NNPVKSITVIRIVNGDYTF 378 >UniRef50_Q11D26 Extracellular ligand-binding receptor n=3 Tax=Alphaproteobacteria RepID=Q11D26_MESSB Length = 366 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 146/368 (39%), Positives = 211/368 (57%), Gaps = 6/368 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ + + L ++ +A AD I +A VG M+G A +G GA QA+ DINA G Sbjct: 1 MKKIL--LAGAALGLVMTGSAWAD-ITIATVGPMTGQYASFGAQMRAGAEQAVADINAAG 57 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G+ L DDACDPKQAVAVAN++ G+ +V GH CS S+ PAS +Y DE I+MI Sbjct: 58 GVNGEMLRLEVGDDACDPKQAVAVANQLAGSGVVFVAGHFCSGSSIPASQVYADEEIVMI 117 Query: 121 SPGATNPELT-QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 SP +TNP T +R I R G D QG A K++ E ++IA IHDK YG+GLA Sbjct: 118 SPASTNPTFTDERPGPGIYRVCGRDDQQGNVAGKFLAEKFADKKIAFIHDKTAYGKGLAD 177 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + A + ++ TAGEKD++AL+++LK+E ID +Y GGYY E G + RQ R Sbjct: 178 ATMAVYEEAGGSPALYEAYTAGEKDYTALVSKLKQEGIDILYVGGYYTEAGLIARQMREQ 237 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPY 299 G++T + + + I GDA EG L+T ++P + +VDA+ A K G Y Sbjct: 238 GMQTILVSGDALVADEYWAITGDAGEGTLMTFSPDPRKNPEAKPVVDAMLAAGKTTEG-Y 296 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 TYAA+Q+ A++ GS + + + L NTV+G L +D+KGD+ + ++W Sbjct: 297 SLYTYAAIQAWVDAVKNAGSTDFEPVTEALNEGKFNTVLGTLEFDDKGDVTLPGYVFYEW 356 Query: 360 HADGSSTA 367 DG+ Sbjct: 357 K-DGTYDY 363 >UniRef50_Q8G3D4 Leu/Ile/Val-binding protein homolog 3 n=53 Tax=Rhizobiales RepID=LIVB3_BRUSU Length = 368 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 137/363 (37%), Positives = 206/363 (56%), Gaps = 4/363 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M + +A + + A AD I + V+ ++GP+A +GD GA A++ IN G Sbjct: 1 MNLKLLSSLAFAATIGFASAAYAD-ITIGVIAPLTGPVAAFGDQVKKGAETAVEVINKAG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GIKG+K+V DDA +PKQ V+ AN+IV DGIK+V+G + + P SD+ + G+LM+ Sbjct: 60 GIKGEKVVLKFADDAGEPKQGVSAANQIVGDGIKFVVGPVTTGVAVPVSDVLSENGVLMV 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 +P AT P+LT RG +++ RT G D Q A Y+L+ +K +++A+IHDK YG+GLA + Sbjct: 120 TPTATGPDLTARGLENVFRTCGRDDQQAEVMADYVLKNMKDKKVAVIHDKGAYGKGLADA 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + + V +D +T G+KDFSAL+ +LK + VY+GGY+ E G + RQ G Sbjct: 180 FKAAINKGGITEVHYDSVTPGDKDFSALVTKLKSAGAEVVYFGGYHAEGGLLSRQLHDAG 239 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 ++ +G EG+ N I G A+G L T K ++PA + + ALKA K P+ + Sbjct: 240 MQALVLGGEGLSNTEYWAIGGTNAQGTLFTNAKDATKNPAAKDAIQALKA-KNIPAEAFT 298 Query: 301 WITYAAVQSLATALERTGSD-EPLALVKDLK-ANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 YAAV+ + +ER GS + A+ K L T IG L + E GDL F +F+ Sbjct: 299 MNAYAAVEVIKAGIERAGSTDDSAAVAKALHDGKPIETAIGTLTYSETGDLSSPSFDIFK 358 Query: 359 WHA 361 W Sbjct: 359 WDD 361 >UniRef50_Q2YLG0 Leu/Ile/Val-binding protein homolog 2 n=42 Tax=Brucellaceae RepID=LIVB2_BRUA2 Length = 371 Score = 327 bits (838), Expect = 5e-88, Method: Composition-based stats. Identities = 141/370 (38%), Positives = 207/370 (55%), Gaps = 5/370 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK++ + +A+ T+ AD I V V ++G A +G+ G A+ + NAKG Sbjct: 1 MKKSLFCGVCLCALVAMGGTSFAD-IMVGVGAPLTGSQAAFGEQIKRGVEAAVAEANAKG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G+++ V DDA DPKQ ++VANK V DG+K+VIGH S + P SDIY + G+LMI Sbjct: 60 GMNGEQITLVYGDDAADPKQGISVANKFVGDGVKFVIGHFNSGVSIPTSDIYAENGVLMI 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 +PG TNP T+R + RT D QG KY+ + K ++AI+HDK YG+GLA Sbjct: 120 APGTTNPTFTERELWNTFRTCRRDDKQGIVPGKYMADNYKDGKVAILHDKTPYGQGLADE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + L ++G+ GEKDFSALIA+LK+ ++ VY+GG +PE G ++RQ G Sbjct: 180 TKKKLNELGTKETLYEGVNVGEKDFSALIAKLKQAGVNVVYWGGLHPEAGLIIRQMADQG 239 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LK QF+ +G+ + L++IAG A EG L T +P N +V + D Y Sbjct: 240 LKAQFISGDGIVSNELASIAGPAVEGTLNTFGPDPRNNPDNAELVKKFR-DAGFEPEAYT 298 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQW 359 + YA VQSL A GS++P+ + +K G TV+G +++D KGD + +F+W Sbjct: 299 FYAYAGVQSLVNAANAAGSNDPMEVATAMKEKGPFKTVLGDISFDAKGDPSLSPYVMFEW 358 Query: 360 H--ADGSSTA 367 DG Sbjct: 359 RKGEDGKYNY 368 >UniRef50_A6LX40 Extracellular ligand-binding receptor n=3 Tax=Clostridium RepID=A6LX40_CLOB8 Length = 393 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 94/338 (27%), Positives = 165/338 (48%), Gaps = 3/338 (0%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 A D IK+ V ++G + G NG++ AIK+IN GG+ G KL V DD Sbjct: 38 GSAASGDTIKIGGVFPLTGDVPALGAAMENGSKLAIKEINDAGGVLGKKLELVSEDDQNQ 97 Query: 78 PKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 A K++ D + V+G S + P + + +D ++MI+PG+TN ++T G + Sbjct: 98 AATAPNAITKLITQDKVSAVVGTYASKCSIPMAAVAKDSKVVMITPGSTNEKVTTEGGDY 157 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFF 195 + R +D QG AK+ E +K +++A+++D Y G+++ + +AA V + Sbjct: 158 VFRACFIDPLQGQVGAKFASENLKAKKVAMLYDIGNDYCVGISKEFKKNFEAAGGTVAYE 217 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 AGE DF A + +K+ N+D +Y Y +G + +QAR +G+K F+G + + Sbjct: 218 KTYNAGESDFKAFLTEIKELNVDVIYLPDNYSTVGLIAKQAREIGIKAPFLGSDSWSDPG 277 Query: 256 LSNIAGDAAEGMLVTMPKRYDQDPAN-QGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 L + GDA EG T D A+ + V+ K + + ++Y +V LA A+ Sbjct: 278 LVKVGGDAIEGSYFTDHLSLKSDNASIKKFVENYKKEYNGDPSAFSVLSYDSVYILAEAI 337 Query: 315 ERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 ++ GS + A+ + A+ +D+K + Sbjct: 338 KKAGSTDENAIKDAMAKLDADCGTTHYKFDDKHNPIKS 375 >UniRef50_B1ZYR7 Extracellular ligand-binding receptor n=3 Tax=Verrucomicrobia RepID=B1ZYR7_OPITP Length = 384 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 155/340 (45%), Gaps = 7/340 (2%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A+ IK+ +++G A G G A++ INA GG+ G L + D ++ Sbjct: 26 AEPIKIGEYASLTGKEASLGQSSHQGTVLAVETINAAGGVLGRPLQLITEDTQSKAGESG 85 Query: 83 AVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 K+++ D + ++G + SS + + I + + M++P +TNP++T+ G +I R Sbjct: 86 TAVRKLISRDKVVAILGEVASSRSLEGAPICQRLKVPMVTPASTNPKVTETG-DYIFRVC 144 Query: 142 GLDSSQGPTAAKYILETVKPQRIAI-IHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 +D QGP AK+ LET+K +R+ + + Y GLA+ ++ + A +V Sbjct: 145 FIDPFQGPVMAKFALETLKAKRLGLMVSASSAYSVGLAKYFKEAIVAGGGTIVAEQRYQE 204 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G+KDF A + ++ +D ++ GYY E M++QAR +G+ G + +L + Sbjct: 205 GDKDFKAQLTAIRAAGVDAIFNPGYYNEGALMVKQARDLGITVPMFGADSWEAEALIELG 264 Query: 261 GDAAEGMLVTMPKRY-DQDPANQGIVDALKADK--KDPSGPYVWITYAAVQSLATALERT 317 G A EG+ + D P Q V A + + Y +V LA A+ R Sbjct: 265 GKAVEGVFLCSHYTPTDPAPRVQDFVRAYRQRWGAGYAPDSNASLGYDSVLVLADAIRRA 324 Query: 318 GSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGV 356 GS EP A+ L V G + D+ D + Sbjct: 325 GSAEPKAIRDALAQTRNFEAVTGTITIDKNRDASKSAVVI 364 >UniRef50_D0LYK9 Extracellular ligand-binding receptor n=4 Tax=Proteobacteria RepID=D0LYK9_HALO1 Length = 417 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 140/352 (39%), Positives = 212/352 (60%), Gaps = 2/352 (0%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDA 75 + + T + I +AV G M+G A +G GA+QA+ D+NAKGG+ G +L DDA Sbjct: 39 SATATDSGEPIVIAVAGPMTGQYASFGQQMAAGAKQAVADLNAKGGVLGRQLQLEVGDDA 98 Query: 76 CDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ 135 CDPKQAVAVAN++V G +V GH CS S+ PA+ +Y++EGI+ ISPG+T+P+LT+ G + Sbjct: 99 CDPKQAVAVANQMVQQGAVFVAGHWCSGSSIPANQVYDEEGIVSISPGSTSPKLTEEGGE 158 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 + R G D QG AAK+++E + IA++HDK YG+GLA + L+A + Sbjct: 159 MVFRVCGRDDQQGEVAAKFLMEQFPGKNIAVLHDKTAYGKGLADETRKNLQAGGLEPTLY 218 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 + TAGEKD++AL+++LK+ ID VY GGY+ E G +LRQ R G+++ M + + Sbjct: 219 EAYTAGEKDYTALVSKLKQNEIDVVYIGGYHTEAGLILRQMREQGMESVLMSGDALVTQE 278 Query: 256 LSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 +I GDA G L+T ++ +V+ + K +P G YV TY A+Q+ A A E Sbjct: 279 YWSITGDAGAGTLMTFSPDPRKNENAAAVVEVFREQKIEPEG-YVLYTYGAIQAWAAAAE 337 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 G + A+V+ L A TV+G + +D+KGD+ + V++W DG+ Sbjct: 338 AAGKVDADAVVEKLHAMEFETVLGSIGFDDKGDVTAPGYVVYEWK-DGAYAY 388 >UniRef50_Q3JQA3 Periplasmic ligand binding lipoprotein n=74 Tax=Burkholderiaceae RepID=Q3JQA3_BURP1 Length = 662 Score = 323 bits (829), Expect = 5e-87, Method: Composition-based stats. Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 4/352 (1%) Query: 14 ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDK--LVGV 70 A + A +++ ++G A +G NG + A+ D A+ I G V Sbjct: 300 ATGAARAADETPVRIGFAAPLTGVNAGYGKDLQNGVQLALDDARAQKITIAGKPARFELV 359 Query: 71 EYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT 130 DD DP+ V A +V+ + V+GH S +T PAS +Y+ GI +I P ATNP +T Sbjct: 360 VEDDQADPRIGVQAAQSLVDKKVSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPVIT 419 Query: 131 QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANA 190 RG ++ D A +Y ++ K +RIAI+ D+ +G+G A +KAA A Sbjct: 420 SRGLANVFMVIATDGQNAGNAGRYAVDVTKAKRIAIVDDRTAFGQGEADEFDKAVKAAGA 479 Query: 191 NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 +V + + DF A I LK +N+D V++GG ++Q + +GL QF+G G Sbjct: 480 AIVAREYTSNQAVDFRAQITSLKSKNVDLVFFGGLDSLAANFIKQMKQLGLNAQFVGGGG 539 Query: 251 VGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQS 309 V +A IAG AAEG + R DQ P + K Y Y A + Sbjct: 540 VKDAEFIKIAGPAAEGAMAWEYGRPLDQLPQGKDFESRFKKRFGVDVLSYAQFGYDATWA 599 Query: 310 LATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 A++ G+ +P LK + G +++ G LK ++Q + Sbjct: 600 AIKAMQAAGTTDPSGYRPALKKIDFEGITGRISFGGDGSLKSGMSTLYQVKS 651 >UniRef50_C6JQZ8 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=2 Tax=Fusobacterium RepID=C6JQZ8_FUSVA Length = 386 Score = 323 bits (828), Expect = 7e-87, Method: Composition-based stats. Identities = 93/356 (26%), Positives = 168/356 (47%), Gaps = 7/356 (1%) Query: 15 LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDD 74 A + + IK+ + ++G +A +G N ++ A ++INA GGI G K+ + YD+ Sbjct: 26 AAATEKKEPEVIKIGGLAPLTGGLAIYGTTASNASKLAFEEINANGGILGKKVEFIVYDE 85 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 D +AV N++V+DG+ +IG + S T ++I + + MI+P T +T+ G Sbjct: 86 KGDSTEAVTAYNRLVDDGVVALIGDITSKPTLAVAEIAAQDNMPMITPTGTQYNITEAG- 144 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVV 193 ++ R D QG A + + + + AI+ + Y +G+A+S + + +V Sbjct: 145 PNVFRVCFTDPYQGVVLANFAQQKLNAKTAAILVNNSSDYSDGIAKSFTEEAEKLGITIV 204 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 +G G+KDF A + ++ N D + YY + + QAR VG+K+ F+GP+G Sbjct: 205 GKEGYADGDKDFKAQLTKIAPTNPDVLVIPEYYEQAALIATQAREVGIKSTFIGPDGWDG 264 Query: 254 --ASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSL 310 +L A A E T D Q + + KA + + + Y A + Sbjct: 265 IAKALDKSAYGAIENSYFTNHYSTQDTSEKVQNFIKSYKAKYNEDPSAFSALGYDAAYIV 324 Query: 311 ATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 ++E+ GS + A+V+ +K + V G L +D K + + + DG+ T Sbjct: 325 KASIEKAGSTDKKAVVEAMKNINYDGVTGQLTFDAKNNPV-KAVTIIKVV-DGNYT 378 >UniRef50_B4UJL7 Extracellular ligand-binding receptor n=12 Tax=Bacteria RepID=B4UJL7_ANASK Length = 404 Score = 323 bits (828), Expect = 8e-87, Method: Composition-based stats. Identities = 94/342 (27%), Positives = 153/342 (44%), Gaps = 7/342 (2%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 D I + VG+++G A +GD G + AI+++NAKGG+KG L YD+ P+++ Sbjct: 41 TGDRILLGHVGSLTGSEATFGDSTDKGIQLAIEEVNAKGGVKGKPLALKTYDNQGKPEES 100 Query: 82 VAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG---YQHI 137 A ++V D + ++G + S+ + + I + + MI+P +TNP +T+ + Sbjct: 101 AIAATRLVLQDRVSVLLGEVASTRSLAMAPIADANHVPMITPSSTNPRVTKENGRVRPFV 160 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFD 196 R +D QG AK+ + +K R+A++ D Y GLA K +V Sbjct: 161 FRVCFIDPFQGTVMAKFARDHLKISRVAVLRDVGNDYSMGLADFFLAKFKELGGTIVDDQ 220 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 AG++DF A + +K + + +Y GYY ++ + RQAR +G+K MG +G +A L Sbjct: 221 SYKAGDQDFKAQLTTIKGKGPEAIYVPGYYTDVALIARQARELGMKQPLMGGDGWDSARL 280 Query: 257 SNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 I G A EG + D P Q V K Y A + A A+ Sbjct: 281 YEIGGKALEGSYFSNHYSPEDPAPRIQDFVKRYKERFGSVPDSLAAQGYDAARIAADAMG 340 Query: 316 RTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGV 356 R A+ L A V G ++ D D + Sbjct: 341 RAKDLSGEAIRDALAATRDYPGVTGVISIDADHDAVKPAVVL 382 >UniRef50_D2RMU5 Extracellular ligand-binding receptor n=5 Tax=Veillonellaceae RepID=D2RMU5_ACIFE Length = 392 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 9/342 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 ++I+V + ++G +A +G + G + A+ INAKGGI G K+ VE D+ +P ++ Sbjct: 36 NEIRVGALFELTGNVANYGKSTYKGVQLAVDQINAKGGINGKKIKLVEADNKSEPSESGN 95 Query: 84 VANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT----QRGYQHIM 138 A K++ D + +IG S A+ + + + +++P AT P +T + I Sbjct: 96 AATKLITKDKVSVIIGPATSGCVSAATPVVTNSKVPLMAPVATAPGITVDEKGKVRPFIF 155 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDG 197 R D QG AK+ ++T+K + IAI +D Y +GL L+ VV + Sbjct: 156 RACFTDPFQGKLMAKFAVDTLKLKNIAIFYDSSSDYSKGLMDVFGKTLEEKGGKVVGKEA 215 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 A ++DF + + +LK N + +Y GYY E+ ++++QAR VGL +G +G + L+ Sbjct: 216 FLAKDQDFKSALTKLKATNPEALYVPGYYEEVSKIIKQAREVGLTCPILGSDGWDSPKLA 275 Query: 258 NIA-GDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 IA G+A G T D+DP Q + KA + + Y ++A A++ Sbjct: 276 QIAGGEALNGTYFTSAYSAQDKDPHVQQFIKDYKAKFNEEPDTFAIHAYDGTLAVAEAIK 335 Query: 316 RTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGV 356 + G+ + + L K G D+ + + Sbjct: 336 QAGTTDGTKIADALSKIKDLQVATGKYTLDKDHNPVSGGIII 377 >UniRef50_C9KMT7 Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMT7_9FIRM Length = 391 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 89/354 (25%), Positives = 173/354 (48%), Gaps = 6/354 (1%) Query: 7 TIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 T++ G + A +++IKV M+G +A +G +G + AI +IN GG+ G K Sbjct: 17 TMLMGGVLAGCGSQADSNEIKVGANFEMTGNVANYGAATLDGLKLAIDEINDAGGVDGKK 76 Query: 67 LVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT 125 + V D+ + +AV A K++ +D + ++G +++ S + D + +I+P AT Sbjct: 77 ITLVTADNKSEASEAVNAATKLISDDKVSVLVGPAVTANVIAESQVATDNKVPIIAPDAT 136 Query: 126 NPELT---QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAI-IHDKQQYGEGLARSV 181 +P++T + + R+ +D QG AK+ E +K + I + + Y + L + Sbjct: 137 SPDVTVENGKVKPFVFRSCFIDPQQGTVMAKFASENLKAKTAVIYVDNSTDYSKSLGKVF 196 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 ++ +AA V+ + A ++DF A + +LK N D ++ YY E+G++++QAR +G+ Sbjct: 197 KEKFEAAGGKVLMEEAFLAKDQDFKATLTKLKTANADVIFVPAYYEEVGKIVKQARELGI 256 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVW 301 +G +G ++ +++IAG A D+D + + V+A K + Sbjct: 257 TCPILGTDGWDDSKVTDIAGADALNNTYFSTHYSDKDESVKPFVEAFKNKYGHMPNVFAA 316 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDF 354 + Y A + LA A++R GS +P + K L+ G + D+ + Sbjct: 317 LGYDAGKMLADAIKRAGSGDPEKIQKALEETKDLKVGTGTITMDKNHNPIKQAV 370 >UniRef50_B9Z602 Extracellular ligand-binding receptor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z602_9NEIS Length = 372 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 96/360 (26%), Positives = 167/360 (46%), Gaps = 6/360 (1%) Query: 7 TIIAGMIALA-ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG-IKG 64 T++ ++AL IS + A+ +K+ +G ++GP A WG N A+ A+ +N I G Sbjct: 4 TLLVTLLALGGISAASAAEVVKIGFIGPLTGPDAHWGKDNQNCAQLAVDTLNRSALRING 63 Query: 65 DKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 + V DD DPKQ+ A K++++ +K V+G S +T PA+ I G+ S Sbjct: 64 QPVQFELVSQDDQEDPKQSTLAAQKLLDEEVKAVVGPFTSGTTIPAARIINQAGLPQFS- 122 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 A N T +GY + R + +D+ GP A+Y L +K +RIA+I D+ Y +GLA + Sbjct: 123 VAVNATYTNQGYGNAFRLSAVDTRMGPAIAQYALSELKAKRIAMIDDRTAYSQGLADKFE 182 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 K A V+ + T G+ +FS ++ ++ D ++ + + Q + +GL Sbjct: 183 AEAKRLGAQVIRREYTTPGQNNFSPILTTIRAAKPDLLFVAMSDSQAAPLALQMKQLGLS 242 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGML-VTMPKRYDQDPANQGIVDALKADKKDPSGPYVW 301 T+ + + + + ++G +EG + ++ Q + A P Y Sbjct: 243 TKVLSGDMIQTDNFIKLSGSNSEGFMAAVAGNVLEKRSQGQDFIKRYHAKYGKPPLSYGP 302 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 Y AV +A A+++ S EP + LK V +D +GDL V+Q Sbjct: 303 QHYDAVMLVAKAMQQANSTEPGKVTAALKKISYEGVNASYRFDSRGDLIQAPITVYQVRQ 362 >UniRef50_A1KBY9 Probable leucine-specific binding protein n=2 Tax=cellular organisms RepID=A1KBY9_AZOSB Length = 374 Score = 320 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 112/356 (31%), Positives = 179/356 (50%), Gaps = 7/356 (1%) Query: 19 HTAMADDI-KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGD---KLVGVEYDD 74 A+A + K+ G ++GPIA +G GAR A++D NA+G G K V DD Sbjct: 19 SAALAQTVVKIGHAGPLTGPIAHFGKDGEMGARLAVEDANARGITLGGQKVKFELVSEDD 78 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 DP+ A VA ++ + G+K V+GH+ S ++ PAS +YE G+ +++P +T+P+LT++GY Sbjct: 79 QGDPRTATTVAQRLTDLGVKGVVGHVTSGASIPASRVYEQAGVPVVTPSSTSPKLTRQGY 138 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + R D QG AKY ET+K ++AII D+ YG+GLA + D K VV Sbjct: 139 KVTFRVIANDLQQGEATAKYAAETLKAAKVAIIDDRTAYGQGLADAFADAAKQRGLQVVG 198 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + T DF A++ ++K + D V+YGG + MLRQ R +G ++G +GV Sbjct: 199 REFTTDKSTDFLAILTKIKAKAPDAVFYGGMDAQAAPMLRQLRQLGSSAIYLGGDGVCTG 258 Query: 255 SLSNIAGDAAEGMLVTMPK--RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 + +AGDA + + P + K K Y +Y A +L Sbjct: 259 EMIKLAGDAMSDKVYCSQASLPPAKMPGGTDFLSRFKQRYKADVLLYAPYSYDAATALIE 318 Query: 313 ALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 A++ S EP + L+ V G + +D +GD++ + ++ DG +A Sbjct: 319 AMKAADSSEPAKYLPALQRVAFKGVTGEIAFDPQGDIRNGGVSMHRFR-DGKWVSA 373 >UniRef50_Q316T7 Amino acid ABC transporter, periplasmic-binding protein n=12 Tax=Deltaproteobacteria RepID=Q316T7_DESDG Length = 393 Score = 320 bits (820), Expect = 7e-86, Method: Composition-based stats. Identities = 116/372 (31%), Positives = 185/372 (49%), Gaps = 7/372 (1%) Query: 1 MKRNAKTIIAGMIA-LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M R + G++A + ++ TAMA +K+ ++ ++G A G N + NA+ Sbjct: 20 MSRKMTAFVLGVVATVLMAGTAMAGTVKIGLMCPLTGSWASEGQDMRNIVLMLAEQTNAQ 79 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GGI GD + V DDA DPK A A ++ G+ VIG S+ T+ + IY++ I+ Sbjct: 80 GGINGDMVEIVVEDDAGDPKTAALAAQRLSTMGVSAVIGSYGSAITEASQAIYDEMDIVQ 139 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 ++ G+T LT++G RT D QG AA +L+ ++IAI+HD Y +GLA Sbjct: 140 VATGSTAIRLTEKGLPLFFRTCPRDDEQGRVAAA-VLKEKGYKKIAILHDNTSYAKGLAE 198 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 LK+A VVF+D +T E+D+SA++ +LK D +++ GYYPE G +LRQ + + Sbjct: 199 ETLTLLKSAGTEVVFYDALTPNERDYSAILTKLKAAGPDAIFFTGYYPEAGMLLRQKQEM 258 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQG--IVDALKADKKD-PS 296 MG + N L IAG +A G L P P Q A KA P+ Sbjct: 259 KWDVPMMGGDATNNLDLVKIAGKSAAGFLFISPPTLQDLPDKQAKDFAAAYKARYGTMPA 318 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKA--NGANTVIGPLNWDEKGDLKGFDF 354 + + A +L A+ GS +P + +K + G L+++EKGD G + Sbjct: 319 SVWSVLAGDAFIALKAAITGAGSTDPQDIAAYMKKDLKDLPGLTGSLSFNEKGDRVGDLY 378 Query: 355 GVFQWHADGSST 366 +++ +G+ Sbjct: 379 RLYRVDENGNFV 390 >UniRef50_A4XM95 Extracellular ligand-binding receptor n=4 Tax=Clostridia RepID=A4XM95_CALS8 Length = 393 Score = 317 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 80/351 (22%), Positives = 162/351 (46%), Gaps = 11/351 (3%) Query: 17 ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDAC 76 + + + +++ V +SG +AQ+G G + A+++IN KGG+ G K+ V +D+ Sbjct: 28 FAFASSSKTVRLGVNLELSGAVAQYGQRTLEGLKMAVEEINKKGGVLGKKIELVVFDNKS 87 Query: 77 DPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT----- 130 D +A+ +A ++ + + ++ + S +T+ AS + ++S AT+ +T Sbjct: 88 DKTEALNIATRLATKENVLALLSPVTSGATKSASIAATRYRVPLVSATATDDSVTIDERT 147 Query: 131 QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAAN 189 + ++ R DS QG A + L+T+K + AI+++ Y +GL ++ ++ Sbjct: 148 GKTKAYVFRICFNDSFQGSVMANFALKTLKVKTAAILYNAASDYSKGLYKNFKETFTKGG 207 Query: 190 ANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPE 249 VV + GE+DF+ ++ +++ + D ++ YY + G +++QAR +G+ +G + Sbjct: 208 GKVVAEEAFQQGEQDFNGILTKIRDKKPDVIFTPVYYDDAGLIIKQARELGMWMPILGTD 267 Query: 250 GVGNASLSNIAGD--AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAV 307 G + + AG A T D D Q V K K + Y Sbjct: 268 GFDDPKVVEKAGKKYATNIFFSTHYSSQDTDKRVQDFVKRYKQKYKIEPNALSALGYDLG 327 Query: 308 QSLATALERTGS-DEPLALVKDLK-ANGANTVIGPLNWDEKGDLKGFDFGV 356 +A A++R GS + L + L+ + G ++ D K + K + Sbjct: 328 YFMADAIKRAGSTTDREKLRRALENTKNFVGLTGIISIDSKHNAKKSAVII 378 >UniRef50_B6WPS4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPS4_9DELT Length = 355 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 185/348 (53%), Gaps = 2/348 (0%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 AD IK+ V GA SG +A +G N A+ I++ NAKGG+ G K+ V DD C P+ A Sbjct: 2 AADTIKIGVQGAHSGDLASYGVPSLNAAKIVIEEANAKGGVLGKKIELVAQDDQCKPELA 61 Query: 82 VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM-RT 140 A K+++D + ++G +CS +T + +YE I+ ISP AT P LT G + RT Sbjct: 62 TNAATKLISDKVVAIMGPICSGATNASLPMYESANIISISPTATTPALTLEGKHPLFLRT 121 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 D++Q + YI+E +K +++A +HD +YG+G A+ + L+ A V F+ +T Sbjct: 122 VANDNAQAQLTSSYIIEVLKAKKVAYLHDNGEYGKGFAQQNRGILEKAGVETVLFEAVTP 181 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 DFSA++ +L++ D + +GGY ++++Q R +KT +GP+GV + + + Sbjct: 182 DAVDFSAVVRKLRRAKADVLVFGGYQNTASKLVQQMRRDRVKTPLIGPDGVKDETFLKMT 241 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 G +EG++ + PK + +A G + YAA Q+L A+E GS Sbjct: 242 GKDSEGVMASYPKDTSTLAMYKHAREAHVKQFGSEPGFGYYNAYAATQALIKAIEVAGST 301 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 E ++ LK+ +T +G +++++ GD G V+ DG + Sbjct: 302 ETDKIMAALKSTEVDTPLGKMSFNKAGDATGLGLSVYVVK-DGKFVES 348 >UniRef50_C2CF86 Branched chain amino acid ABC superfamily ATP binding cassette transporter binding protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2CF86_9FIRM Length = 389 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 84/367 (22%), Positives = 155/367 (42%), Gaps = 17/367 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD------------DIKVAVVGAMSGPIAQWGDMEFNG 48 M + ++A + A S D IK+ G ++GP++ +G NG Sbjct: 1 MLKKKFGLMALIALFAFSSCGNKDKASDGKASEDSKVIKLGNSGPLTGPLSVYGKTCQNG 60 Query: 49 ARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPA 108 + AI +IN GGI G ++ DD + +AV NK++ D + ++G + S T Sbjct: 61 IQLAIDEINKNGGIDGKQVEWTGLDDKGEITEAVTNYNKLMEDKVNAILGGIPSKPTLAM 120 Query: 109 SDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII- 167 ++ + I+ I+P T +T+ G ++ R D QG A + + +K +++AI+ Sbjct: 121 AESAAKDEIVYITPTGTQANITE-GKDNVFRVCFTDPFQGEVLANFAADKLKAKKLAILR 179 Query: 168 HDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYP 227 + Y G+A ++ K A VV + + DF A + ++K EN+D + YY Sbjct: 180 NQSSDYSMGVADVFKETAKKAGMEVVADESYGDNDTDFKAQLTKIKSENVDVLLIPDYYE 239 Query: 228 EMGQMLRQARSVGLKTQFMGPEGVGN--ASLSNIAGDAAEGMLVTMPKRY-DQDPANQGI 284 ++ + Q R G+K +G +G + + + EG + D Q Sbjct: 240 KVALISSQVRDSGIKATLLGADGWDGVLSVMDQSSFKDVEGSYFSNQFSLDDPSEKCQKF 299 Query: 285 VDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWD 344 + K K+ + Y V A+E + + +VK LK + + G +D Sbjct: 300 IKDYKEKYKEDPTTFAAEGYDTVYLYKQAVEEAKTTKWDEVVKALKNIKFDGITGSFKFD 359 Query: 345 EKGDLKG 351 E + + Sbjct: 360 ENNNPRK 366 >UniRef50_Q4G268 HmgD n=1 Tax=Pseudomonas putida RepID=Q4G268_PSEPU Length = 382 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 117/366 (31%), Positives = 181/366 (49%), Gaps = 4/366 (1%) Query: 5 AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 T + ++A+ ++ A ++ +++ G ++GP A G +G + A+++ N + G Sbjct: 11 LATAVTLLMAMGTANAADSEVVRIGFAGPLTGPSAHQGQDVEHGIQIAVEEANQQQLKIG 70 Query: 65 DKL---VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 DK+ V DD DP+ AVA ++V+ + VIGH S ++ PAS IY GI IS Sbjct: 71 DKVAQFKLVSEDDVADPRTGTAVAQRLVDSKVAVVIGHYNSGTSIPASKIYAAAGIPQIS 130 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 P ATNP LTQ+G + RT D++ G A Y++ +K QRIAI D+ YG+GLA V Sbjct: 131 PSATNPTLTQQGIPSVFRTVNDDATLGRYAGNYLVSQLKAQRIAIFDDRTAYGQGLADEV 190 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 +KAA NVV + DF+A++ K + D V++ + M +Q +++GL Sbjct: 191 TRAVKAAGGNVVVREYTNDKSTDFNAILTTAKAQKADAVFFAALDYQAAPMAKQMKNLGL 250 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYV 300 K +FM + N S +AG AAEG D P LK Sbjct: 251 KARFMNIGNLPNDSFKQMAGSAAEGTYAWNYGTPLLDMPKGAAFEQKLKDKFGVGVVQSS 310 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 Y A + A+ + GSD+P + LK+ + V G + +D+KG+LK VFQ+ Sbjct: 311 PAAYDATWAAINAMVKAGSDDPKVYLPVLKSQSYDGVTGTIAFDDKGNLKNPAATVFQFA 370 Query: 361 ADGSST 366 G T Sbjct: 371 DGGWKT 376 >UniRef50_D1C9L8 Extracellular ligand-binding receptor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9L8_SPHTD Length = 375 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 105/366 (28%), Positives = 177/366 (48%), Gaps = 9/366 (2%) Query: 4 NAKTIIAGMIALAISH--TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 +A +IA ++A S A +D+IK+AVVG M+G AQ+G+ GA+ A + INA G Sbjct: 10 SALFVIALLVAGCGSPGDAADSDEIKIAVVGPMTGDAAQYGEDFTRGAQLAAEQINAADG 69 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMI 120 + G ++ V +DD D +A +VA KI D I +GH SS+ A IY+ + ++ Sbjct: 70 VDGKQITIVTFDDRNDTTEAASVAQKIATDSSIVASMGHFTSSTVYAAMPIYKSNQLPLV 129 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 A++P +T++G + + R + ++ A I+ + ++IAI + +G+ Sbjct: 130 VISASDPGITEQGNEWVFRVSPTNNLGAEAMADLIVNELGLKKIAIFYLNTDFGKTEREF 189 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 ++A +V + KDFS+ I +LK D VY YY + ++RQA+ G Sbjct: 190 FTARVQANGGEIVLDEPYQPDAKDFSSSIIKLKNAGADAVYLSSYYNDAVLLIRQAKDAG 249 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 ++ ++ V + + I G+A EG++ R Q + + +A +A D P+V Sbjct: 250 VEIRWFTSAAVLSPQFTEIGGEAVEGVIT---NRVSQGDSWDAVAEAYRAKYNDDPSPFV 306 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQW 359 Y+AVQ++A A G A+ L G T +GPL +DE F + Sbjct: 307 IYAYSAVQAVAEAARSEG-TSREAIRDGLAKIQGLETALGPLTFDENRQAVYESFDYLEV 365 Query: 360 HADGSS 365 DG Sbjct: 366 R-DGQF 370 >UniRef50_C7HSH7 Branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Bacteria RepID=C7HSH7_9FIRM Length = 392 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 81/347 (23%), Positives = 158/347 (45%), Gaps = 7/347 (2%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 +D IK+ + +GP++ +G+ GA A+ +IN GGI G K+ + YDD + + Sbjct: 38 SDTIKIGAIIPQTGPVSNYGNSSEKGALLAVDEINKNGGINGKKIEWISYDDKGEITDST 97 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 NK+ + + ++G + S S+I + +GI MI+P T +T+ G ++ RT Sbjct: 98 TAYNKLKGEKVTAIVGPITSKPALAVSEIAKKDGIAMITPTGTQGNITE-GKDNVFRTCF 156 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 D QG AK+ E K +++AI+ + Y G+A + ++ ++V + Sbjct: 157 TDPYQGKLLAKFAAENQKAKKVAILRNTSSDYSNGIADEFKKEVEKLKLDLVADESYGDN 216 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN--ASLSNI 259 + DF A + ++ K D + YY ++ + QAR G+ +F+G +G + Sbjct: 217 DNDFKAQLTKIAKAKPDVLLVPDYYEKVALIAPQARDAGIDAKFIGSDGWDGVVNVMDKS 276 Query: 260 AGDAAEGMLVTMPKRYDQDPA-NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 EG + D D + V K + K+ + ++Y + L A+E+ Sbjct: 277 QLGLVEGSCFSNHFALDSDDQRVKDFVKKYKEENKEDPSAFSALSYDTIYLLKQAIEQAK 336 Query: 319 SDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 S+E +++ +KA + + G ++E + + + DG+ Sbjct: 337 SEESDKIIEKIKAIEFDGITGKFKFNENHNPIKSA-SMMEIK-DGTY 381 >UniRef50_Q7NI31 Glr2353 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NI31_GLOVI Length = 367 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 8/351 (2%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 +D + + V G +SGP G+ A++ +N KGG+KG ++ V DD P Sbjct: 19 CGSSDKVYIGVAGPLSGPQTVQGEYILKAVELAVEQVNVKGGVKGKQIEVVTGDDQAKPL 78 Query: 80 QAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 A +VA K+ + +G+ V+GH S + PAS IY ++MI+PG+TNP LT+ G +++ Sbjct: 79 DATSVARKLASTEGVMGVVGHFNSGCSIPASSIYNQGNLVMITPGSTNPALTENGLKNVY 138 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R G D QG + L +++ QR+AI+HDK YG+GLA ++ ++ A V FF+GI Sbjct: 139 RIVGRDDQQGAVDGDFALRSLQAQRVAILHDKTPYGQGLASFFRETVETGGAEVTFFEGI 198 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 T G++DF A++ R+K + D ++YGG + E G ++ QAR +G+K++F+ +G S + Sbjct: 199 TQGDRDFRAVLTRIKGIDPDTIFYGGVFVEAGLVVSQARELGIKSRFISGDGTKEQSFID 258 Query: 259 IAGDAAEGMLVTMPKRYDQDPANQGIVDALKADK-KDPSGPYVWITYAAVQSLATALERT 317 I G A + ++ P + N VDA + GP+ Y A + L A+E Sbjct: 259 IVGKNAGDIYISGPALVN----NAAFVDAYMDKYNNEEPGPFSPYAYDAARILIAAMESA 314 Query: 318 GSDEPLALVKDLKA-NGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 A+ +++ + G + +D KGD F +F DG Sbjct: 315 PELTREAVAAEVRKLKNFAGLAGSITFDAKGDRDKAPFDIFVIK-DGEFVP 364 >UniRef50_B1L6B9 ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6B9_KORCO Length = 401 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 164/373 (43%), Gaps = 10/373 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAM--------ADDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 M R +A ++ + ++ A +K+ ++ ++G +A+ G A A Sbjct: 3 MSRGVLIGLAAIVVILVAAAVFFLTMQPKEAGTVKIGLIAPLTGSLAEHGLDMKQAALLA 62 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDI 111 +++IN+KGGI G K+ V D AC A A K++ D + ++G CS+ T Sbjct: 63 VEEINSKGGILGKKVELVIEDTACKADLATAAVQKMITQDNVYAIVGEYCSTVTLAVQPT 122 Query: 112 YEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ 171 + L++ P + ++T++GY++ R+ Q A +I+E +KP+ A++ Sbjct: 123 IMENKKLLLVPVSVATKITEQGYKYTFRSCANQWMQTTQRADWIVEHLKPKTAAMLGIND 182 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 YG + + +KA +V + AG DF+ ++++K N D ++ + Sbjct: 183 DYGREGLKIWGERVKAKGVTIVAEEYFDAGTTDFTPQLSKIKAANPDVIFVVANIRDAAN 242 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGML-VTMPKRYDQDPANQGIVDALKA 290 +L+QA +GL QF GV + +AGD A G++ V+ + + P Q V Sbjct: 243 ILKQAHEIGLYKQFSMLGGVTSEEFLKLAGDDALGLVHVSYFEPTSKRPVAQEFVQKFVQ 302 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 Y + A +L +E+ G+ + + + +K G + +DEKG + Sbjct: 303 KWNRTPAMYAAGVWDAFMTLKYGVEKAGTWDVDKVAEAIKTIKFEGAQGTIYYDEKGQAQ 362 Query: 351 GFDFGVFQWHADG 363 V DG Sbjct: 363 TKVLLVQVQKVDG 375 >UniRef50_Q39HK1 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=30 Tax=cellular organisms RepID=Q39HK1_BURS3 Length = 404 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 108/371 (29%), Positives = 183/371 (49%), Gaps = 7/371 (1%) Query: 4 NAKTIIAGMIALAISHTAMADD---IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 + A ++ +A S A AD + + ++G +A G N AR AI++IN++ Sbjct: 29 RMPLVGATVVLVAASMQARADTPSVVLIGHAAPLTGQLANMGKDSENAARLAIEEINSRQ 88 Query: 61 GIKGDK---LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGI 117 + G K DDA DP+ VA K+V+DG+ V+G + S + PAS IY D + Sbjct: 89 PVVGGKPVRFQLDSQDDAADPRTGTQVAQKLVDDGVVAVVGDINSGVSIPASRIYNDAHV 148 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 IS G+TNP TQ+GY+ R D+ QGP A+Y + T+ +R+A+I D YG+GL Sbjct: 149 TQISQGSTNPVFTQQGYRTTYRLVATDAMQGPALARYAIATLGAKRVAVIDDSTAYGQGL 208 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 A + KA+ A VV + DF A++ ++K D + YGG G +++QA Sbjct: 209 ANEFEKAAKASGAQVVTREATNDKAIDFRAILTKIKGLQPDVIMYGGSDATAGPLVKQAA 268 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVT-MPKRYDQDPANQGIVDALKADKKDPS 296 ++G++ + +G +G + +AGDA + ++ + + P Q + A Sbjct: 269 NLGIRARVLGGDGACTDKMIGLAGDAIDNLVCSEAGLALSKMPKGQDFNNRYVARYNAQI 328 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGV 356 Y Y AV + A++R GS + ++ + A + V G + +D +GDLK + Sbjct: 329 DAYAPFAYDAVYVIYDAIKRAGSTDRAKVLAAMPATQYDGVTGRIAFDSRGDLKNAAITI 388 Query: 357 FQWHADGSSTA 367 +++ + A Sbjct: 389 YRFKDHKKAVA 399 >UniRef50_Q92ZZ6 ABC transporter, periplasmic solute-binding protein n=6 Tax=Rhizobiaceae RepID=Q92ZZ6_RHIME Length = 363 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 112/342 (32%), Positives = 180/342 (52%), Gaps = 1/342 (0%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 + ++ + V G MSG +A G GA A+ +INA GG+ G ++ + DD CDP+ Sbjct: 16 SQSEAEVLIGVAGPMSGKLAWTGTQLRRGAEMAVANINAAGGVLGQQVRLIVADDFCDPR 75 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 QA+A A K+V DG +VIGH CS ++ PAS IY G+L ISP +TNP LT++G+ ++ R Sbjct: 76 QALAAAEKLVADGAVFVIGHYCSGASIPASKIYAAAGVLQISPSSTNPMLTEQGHANVFR 135 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 D +QG A Y+ + +IAI+HD YG+GLA + L + T Sbjct: 136 VCSRDDAQGHKAGNYLADHWGDSKIAILHDNTTYGKGLADETKKQLNMRGVTEAVYQSYT 195 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+ D+S +A L+ +I +Y GGY+ E M+R AR Q + + + I Sbjct: 196 PGKDDYSVEVAALQTAHIAVLYLGGYHTEAALMVRAARDRAYPVQLISGDDTATEAFGLI 255 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 AG AAEG L T ++ +V+ +A+ + +Y A + A A+ + S Sbjct: 256 AGPAAEGTLFTFVADPRRNAEAAEVVERFRAE-NFEPDSWTLHSYGAAEIWAQAVTKANS 314 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 + A++ L+ + +TV+G +++D+KGDL + + W + Sbjct: 315 LDLQAVIAALREDQFDTVLGRIDFDKKGDLTVQSWVWYVWKS 356 >UniRef50_A1HU78 Extracellular ligand-binding receptor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU78_9FIRM Length = 381 Score = 313 bits (802), Expect = 7e-84, Method: Composition-based stats. Identities = 93/381 (24%), Positives = 168/381 (44%), Gaps = 18/381 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD----------IKVAVVGAMSGPIAQWGDMEFNGAR 50 M + K + ++ + + A + +A+V +SG A +G NG Sbjct: 1 MSKYMKLLSLVVVLIFLVAAAGCGGSSSTSGSKGNLVIAMVNPLSGDSATYGVSHKNGME 60 Query: 51 QAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPAS 109 A ++IN GGIKG ++ + +DDA DPKQA A A K + + ++G SS+T Sbjct: 61 LAREEINKAGGIKGQQIEILFHDDAGDPKQAAAGAQKFADQKNVMAIVGSCLSSNTLAMV 120 Query: 110 DIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD 169 I + + ++ P+L+ ++ R A D+ G I + + +++AI++ Sbjct: 121 PITDKAKLPHSVVSSSTPKLSGMS-KYFFRMAVQDAQVGILMGDLIAQKLGAKKVAILYP 179 Query: 170 KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEM 229 YG+GL ++++ LK VV A +KD+SAL+ +K + +D + G Y + Sbjct: 180 NNDYGKGLTAAIEETLKKHGVTVVSNQAYLATDKDYSALLTGIKAQGVDALAVAGTYTDG 239 Query: 230 GQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLV-TMPKRYDQDPANQGIVDAL 288 G + +QAR +GL +G G + IAG AAEG + + DPA Q V Sbjct: 240 GLITKQARELGLTIPIVGGTGFYSPKFVEIAGKAAEGAIFLGAFVASNPDPAVQNFVKKY 299 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERT---GSDEPLALVKDLKANGANTVIGPLNWDE 345 K + + Y + LA A+++ G+ + + + G + +++ Sbjct: 300 KEKYNMEPDTFAALGYDQMYVLAEAMKKAAEKGAITRENIRDAMAQTNYKGITGTVTFND 359 Query: 346 KGDLKGFDFGVFQWHADGSST 366 +GD ++ DG Sbjct: 360 QGDWVRP--YLYITVKDGKFV 378 >UniRef50_Q2RFK5 Extracellular ligand-binding receptor n=3 Tax=Clostridia RepID=Q2RFK5_MOOTA Length = 399 Score = 313 bits (802), Expect = 7e-84, Method: Composition-based stats. Identities = 82/345 (23%), Positives = 159/345 (46%), Gaps = 12/345 (3%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG-DKLVGVEYDDACD 77 + I + V +SG +A +G + A ++IN KGG+ G K+ + D+ Sbjct: 35 GATGGNTINIGVNYELSGDVATYGTNSKDAILLAFEEINQKGGVLGGKKINAIVLDNGGK 94 Query: 78 PKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-----Q 131 ++A++ A K++ + + ++G S +T AS + + +ISP AT+P++T + Sbjct: 95 KEEAMSAAAKLITENKVVALLGPATSGATMAASTMATKYKVPIISPSATSPDVTVDPQSK 154 Query: 132 RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANA 190 + ++ R +D +Q A++ + + ++ AII+ +Y +GL + ++ Sbjct: 155 KVRDYVFRVCFIDPTQAIVGAEFATKDLGAKKAAIIYSNSDEYSKGLYKVFKEEFAKDGG 214 Query: 191 NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 VV + +G++DF + R+K D +Y YY ++G+++ QAR +G+K +G +G Sbjct: 215 QVVAEESFNSGDQDFRPALTRVKDAGADLIYVPAYYGDVGKIVNQARELGIKVPMLGADG 274 Query: 251 VGNASLSNIAGDAA--EGMLVTMPK-RYDQDPANQGIVDALKADKKDPSGPYVWITYAAV 307 + L+ AG AA T D +P Q + A KA + + Y Sbjct: 275 WDSPKLAEYAGGAANLNNTYFTNHYAASDPNPRLQAFIKAFKAKYNKEPDAFAALAYDTA 334 Query: 308 QSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKG 351 LA A+ R GS +P A+ L + + + D+ + Sbjct: 335 YLLADAINRAGSADPEAIRNALASTKDFEGITSKITIDQNHNPVK 379 >UniRef50_A5HYZ7 Branched-chain amino acid transport system,substrate-binding protein n=10 Tax=Clostridium RepID=A5HYZ7_CLOBH Length = 380 Score = 312 bits (801), Expect = 9e-84, Method: Composition-based stats. Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 5/328 (1%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + IKV +V +SG +AQ G N A+ A+ ++N +GGI K+ V DD +PK+A + Sbjct: 35 ETIKVGLVAPLSGAMAQDGKSILNAAQLAVDEVNKEGGINKKKIELVYEDDKGEPKEAAS 94 Query: 84 VANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 +ANK +D I V+G + T IY I M+ P + P L+ ++ + Sbjct: 95 IANKYSSDKDIMAVMGSFSAPCTLAGIPIYNKAKIPMMGPCGSAPALSGSS-EYYRKVTP 153 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D + G +K++L+ + +++AII+ YG+G+A SV + K VV + Sbjct: 154 SDLTTGKELSKWMLKDMNYKKVAIIYVNNDYGKGVAESVDNFYKENGGQVVAKESYMPKT 213 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 +DF ++I ++K +N D + G +Y + G L+QA +VG + GP + + SL ++AG Sbjct: 214 QDFGSIITKVKSKNPDIIIMGSFYGDAGAFLKQAHNVGYNPKVAGPTPLLSKSLVDLAGK 273 Query: 263 AAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 AEG+ + ++ + + K + +Y A + L +++ G ++ Sbjct: 274 DAEGIFTIGSFSTNLENEKVKEFAEKYKKKYNQDPSSFAAYSYDATKILIEGIKK-GGND 332 Query: 322 PLALVKDLKANG-ANTVIGPLNWDEKGD 348 + + LK G V G +++ GD Sbjct: 333 REKINEALKNMGTYTGVTGNTKFEKSGD 360 >UniRef50_B5WAG3 Extracellular ligand-binding receptor n=2 Tax=Burkholderia RepID=B5WAG3_9BURK Length = 400 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 115/360 (31%), Positives = 174/360 (48%), Gaps = 1/360 (0%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 A + + S + IK+ V +SG A G NGA+ A INA GG+ Sbjct: 23 MAAAVTLLVGMAPGSALSQGATIKIGVPVPLSGSSANAGTDIVNGAKLAAARINAAGGVL 82 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 G ++ V DDACD + AV A K+V+ G+ V G CS++ P S + GI + Sbjct: 83 GKQIELVPEDDACDAQTAVQAAQKLVDAGVVAVAGGYCSAAALPESTTFHRAGIPYVLDA 142 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183 +TNP+LT+ GY ++ RT G D QGP AA ++ + + + +A+I D Y +GLA++ Sbjct: 143 STNPQLTEMGYDNVFRTIGRDDQQGPFAASFMKDVLHAKHVAVIDDNTTYSKGLAQNTVQ 202 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 LK +VV+ + IT G+ D+S + R+ D +YY GY+ E G ++++AR +GLK Sbjct: 203 ALKKDGVDVVYANSITPGQMDYSPTLTRVSSLKPDVIYYTGYFSEAGLIVKEARQLGLKM 262 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWIT 303 MG +G + +L AG AA+GM++T VD GPY Sbjct: 263 TLMGGDGTNDPTLMKTAGAAADGMIITTAPLAQFLSGAHAYVDDYTKAYGQGPGPYSVYE 322 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 Y AV A A+ S +P A+ L G +++ KGD + H D Sbjct: 323 YDAVGVTAKAIADAKSAQPAAITAALHKISNYPGATGTIDFTPKGDRSKAVYITIIVHND 382 >UniRef50_Q985D9 ABC transporter, binding protein n=2 Tax=Mesorhizobium RepID=Q985D9_RHILO Length = 399 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 143/372 (38%), Positives = 210/372 (56%), Gaps = 7/372 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ + A + + A ADDI V+VVG M+G +A GD GA+ A INA G Sbjct: 27 MKKMSILSAAIFGLMMSAPVAFADDITVSVVGPMTGQLATIGDQFKQGAQAAADAINAAG 86 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G + DD CDPKQAV+VAN+I+ +G+K++ GH CS S+ PAS +Y + G LM+ Sbjct: 87 GVNGSMIKLDIEDDQCDPKQAVSVANRIIANGVKFIDGHACSGSSIPASAVYAEAGALMM 146 Query: 121 SPGATNPELTQR----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 SP ++NP LT G+ IMR D +QG +I + + + I+HDK YG+G Sbjct: 147 SPASSNPVLTDAAAKAGWPTIMRLYTRDDAQGAFIGPWIAKKYAGKNVVILHDKSAYGQG 206 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 +A +V+ + V++D I GEKD+SAL+ +LK D VY+GGY+PE G +LRQ+ Sbjct: 207 VADAVRATMNTGGLKEVYYDAINPGEKDYSALVTKLKDLKADVVYFGGYHPEAGLILRQS 266 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPS 296 LK Q + P+ + + +AG A EG + P P + V+ +KA P Sbjct: 267 AEQNLKFQLIMPDSIASPEFWQVAGPAGEGTMFVFPSDPQAKPEAKAAVEKIKAGGFVPE 326 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIGPLNWDEKGDLKGFDFG 355 G + +YA VQ+ A ++R GSD+P + + LK +TV+G + +DEKGDLK + Sbjct: 327 G-FTLFSYAVVQAFAEGIKRAGSDDPAKVAEALKNGTPISTVVGDVTFDEKGDLKNASYD 385 Query: 356 VFQWHADGSSTA 367 + QWH DG Sbjct: 386 INQWH-DGKYAP 396 >UniRef50_D1B6I2 Extracellular ligand-binding receptor n=2 Tax=Synergistaceae RepID=D1B6I2_THEAS Length = 382 Score = 310 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 107/359 (29%), Positives = 182/359 (50%), Gaps = 9/359 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAM-ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M+R +A ++ L++ A A+ IK+ ++ M+G A G+ N + A++ +NA Sbjct: 1 MRRFGVLFLAAVMVLSVGAWAFGAEPIKIGLLVPMTGFAAADGESALNSVKLAVEHVNAS 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G K+ V YDDA DPKQAV +A K++N D + V+G S ++ + +++DE I Sbjct: 61 GGVLGRKVQLVYYDDAADPKQAVPLAQKLINQDRVVAVVGGSYSMPSRAVAPVFDDEEIP 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 ++ A +P++T+ + R L +G AA ++ ++ +R+A++ +G LA Sbjct: 121 FVAAYAIHPDVTKG--DYTFRNGFLGKVEGQAAAYTAVKLLRGKRLAMLTSDNDFGRTLA 178 Query: 179 RSVQDGLKAANANV--VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 + L NV V A EKDF A +A++K+ + D ++ GYY + G ML+QA Sbjct: 179 EGFKTYLNKYAPNVPLVASLTYPASEKDFKAYLAKIKEADPDVIFASGYYFQTGPMLKQA 238 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEG-MLVTMPKRYDQDPANQGIVDALKADKKDP 295 R +G+ Q +G EG + IAG AAEG ++VT R D P Q + +A K Sbjct: 239 REMGIIAQIIGEEGADSPKTIEIAGKAAEGFVIVTNLNRDDPRPVVQKFLKEYRARYKVE 298 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLN-WDEKGDLKGF 352 Y A + A+ R GS + A+ + N + G + +D +G++ Sbjct: 299 PDMVGASAYDAFMIIVEAIRRAGSADRKAIRDAIAKTSAYNGLTGIIRGFDSRGEVIKP 357 >UniRef50_Q2RSC4 Extracellular ligand-binding receptor n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RSC4_RHORT Length = 370 Score = 310 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 212/369 (57%), Gaps = 1/369 (0%) Query: 1 MKRNAKTIIAGMI-ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M+ K + + + ALAIS DI V + ++G IA G+ GA AI N Sbjct: 1 MRTLHKAVFSVTVSALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKA 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GG+KG+ + DDACDPKQ VAVANK V+ G++ VIGH+C+ T AS +Y +E I M Sbjct: 61 GGLKGETITLQVEDDACDPKQGVAVANKFVSAGVEAVIGHMCTGPTMAASTVYSEEEIPM 120 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 ++ AT P+LT+RG ++ R G D QG A K I E Q AI+HDKQ YG GLA Sbjct: 121 VTASATGPDLTERGLTNVFRATGRDDQQGTIAGKMIAERFADQTTAIVHDKQAYGRGLAE 180 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + AA F I GE+DFSALI+RLK+ + VYYGGYY ++GQ++RQ+R+ Sbjct: 181 EAKKAMNAAGKEEALFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQ 240 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPY 299 GL F+G +G+ ++ I G+A EG L T +PA + V+A KAD K + + Sbjct: 241 GLDAVFVGGDGLSSSEFWAITGEAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNF 300 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 + YAA Q L A+ + GS +P A+ K L+ N TV GP+++D KGDL F +QW Sbjct: 301 AYYYYAAAQVLTQAMAKAGSADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQW 360 Query: 360 HADGSSTAA 368 A AA Sbjct: 361 SAGKPKPAA 369 >UniRef50_B8FN98 Extracellular ligand-binding receptor n=12 Tax=Bacteria RepID=B8FN98_DESAA Length = 401 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 117/340 (34%), Positives = 192/340 (56%), Gaps = 3/340 (0%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA-KGGIKGDKLVGVEYDDACDPKQAV 82 + +K+AV GA +G +A +G A ++ +NA +GG+ G K++ V DDAC P+ A Sbjct: 53 EPLKLAVAGAHTGDLASYGIPSVRAAEILVEHVNATQGGVGGRKVILVTEDDACKPEMAT 112 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG-YQHIMRTA 141 A K+V + + V+GH+CS +T+ A IY+D GI+ ISP ATNP+LTQ G Y + RT Sbjct: 113 NAATKLVGEDVDLVVGHICSGATKAALGIYKDSGIIAISPSATNPDLTQSGDYPNFFRTI 172 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAAN-ANVVFFDGITA 200 D +Q + L+ + +IA++HDK YG+GLA + L+ + A VV ++GIT Sbjct: 173 ASDDAQARLEVDFALDVLGLTKIAVLHDKGDYGKGLAEFAKKFLEESGKAEVVLYEGITP 232 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G D+SA++ ++ + V +GGY+PE +++ Q R + T F+ +GV + + +A Sbjct: 233 GGMDYSAVVQKINRSGAQAVIFGGYHPEASKIVMQMRKKDMDTIFISDDGVKDDTFIKVA 292 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 GD AEG+ T PK ++P K + G + Y+AV +L A++++GS Sbjct: 293 GDYAEGVYATGPKDTSKNPLAVEADKLHKEKYGEDYGAFYLNAYSAVLALFNAVDKSGST 352 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 + A+ L+ T +G + +D++GD G F V+Q Sbjct: 353 DYEAVSNALRNEYVATPLGIIKFDDRGDAIGVGFSVYQVQ 392 >UniRef50_B2JW90 Extracellular ligand-binding receptor n=1 Tax=Burkholderia phymatum STM815 RepID=B2JW90_BURP8 Length = 375 Score = 309 bits (793), Expect = 9e-83, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 173/369 (46%), Gaps = 7/369 (1%) Query: 5 AKTIIAGMIALAISHTAMADDI-KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GI 62 K ++AG+ S T +AD + K+ V G ++G A G GAR A++D+NAK + Sbjct: 6 MKMLVAGLGVALASATVLADTVVKIGVAGPLTGSQAASGKDNERGARLAVEDLNAKHMTL 65 Query: 63 KGD--KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G K + DD DPK V VA K+V++G+ VIGH S T PAS IY D ++MI Sbjct: 66 NGQPLKFELISVDDQSDPKAGVTVAQKLVDNGVLAVIGHWNSGVTIPASKIYNDAKVIMI 125 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 +P A+NP LT GY ++ R D+ G A Y T+ +R+A+I D+ YG G+A Sbjct: 126 TPAASNPALTVPGYPYVFRLTTDDNVLGAKMADYAANTLHLKRVAVIDDRTAYGAGVADV 185 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 K ++V + T DF A+++R+K E ++YGGYY + + RQ R +G Sbjct: 186 FASTAKKQGIDIVAREYATDHTVDFKAVLSRVKLEKPQAIFYGGYYGQAAYLARQMRDLG 245 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVT--MPKRYDQDPANQGIVDALKADKKDPSGP 298 + MG +G+ +A A + + P + KA Sbjct: 246 INAVLMGGDGLCVGEFPKLADGALDKKMYCPQGGVPLAALPDGKRFEGRFKAAYGVDPDQ 305 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 YAA + A+ + S L K L NT+ G + +D++G+ V+ Sbjct: 306 KAPSFYAATMMMGAAIAKAQSLSAETLDKTLHQTTFNTLFGQVRFDQRGEWIKAPMTVY- 364 Query: 359 WHADGSSTA 367 W A GS Sbjct: 365 WSAGGSIVP 373 >UniRef50_A3RVH7 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=5 Tax=Betaproteobacteria RepID=A3RVH7_RALSO Length = 393 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 171/347 (49%), Gaps = 6/347 (1%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK---LVGVEYDDAC 76 +++ G ++G A WG NGAR A++D+N KG + G K + DD Sbjct: 39 AQAEQTVRIGNAGPLTGGAAHWGKDNENGARLAVEDLNKKGLVIGGKKVRFELLSEDDQA 98 Query: 77 DPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 DP+QA+ VANK+ + G+K ++GH S + PAS IY GI IS ATNP+LTQ+G+ + Sbjct: 99 DPRQAMVVANKLADSGVKAMLGHFNSGAAIPASAIYARAGIPDIS-VATNPQLTQQGFGN 157 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 R D G +++ ++ + +R+AII D+ YG+G A +K A +V Sbjct: 158 TFRIVASDDDVGVALSRFAVKALNAKRVAIIDDRTAYGQGAAEVFAKEVKGLGATLVSQQ 217 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 + DF A++ +K + D ++YGG + G + RQ + +G+ + +G +G+ + Sbjct: 218 YTSDKATDFMAILTAIKSKRPDVIFYGGMDAQGGLIARQMKQLGIGAKLLGTDGLCTGEV 277 Query: 257 SNIAGDAAEGMLVTM--PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 + I+ A G L K D P KA Y Y ++ ++A A+ Sbjct: 278 AKISAGAVNGTLYCTRGGKALDTMPNGADFARRYKARFGTDVLNYAPYLYDSLMTVAAAM 337 Query: 315 ERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 + S EP + L + + GP+ +DEKG+LK F VF + Sbjct: 338 QAADSVEPPRYLGALARIRHDGITGPVAFDEKGNLKNPGFTVFTYQE 384 >UniRef50_Q47JF2 Extracellular ligand-binding receptor n=142 Tax=Betaproteobacteria RepID=Q47JF2_DECAR Length = 460 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 108/377 (28%), Positives = 180/377 (47%), Gaps = 23/377 (6%) Query: 6 KTIIAGMIALAISHTAMAD------------------DIKVAVVGAMSGPIAQWGDMEFN 47 +++A +A A + +A +K+ V M+GP A G N Sbjct: 5 LSVVALSVAAAFALSACGQKEEPKAAAPAAPAGKPEVVVKLGHVAPMTGPQAHLGKDNEN 64 Query: 48 GARQAIKDINAKGGIKGD---KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSS 104 GA AI+++NAKG G K + DDA DPKQ VA K+V+ + VIGHL S + Sbjct: 65 GAALAIEELNAKGLEIGGAKVKFQLLAEDDAADPKQGAIVAQKLVDAKVNGVIGHLNSGT 124 Query: 105 TQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRI 164 T PAS +Y D GI IS ATNP+ TQ+G++ R D QG ++ + + + Sbjct: 125 TIPASKLYSDAGIPQISGSATNPKYTQQGFKTAFRVMANDVQQGRALGEFAAKQ-GVKTV 183 Query: 165 AIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGG 224 A++ D+ YG+GLA + +A+ VV + DF A++ ++K + V+YGG Sbjct: 184 AVVDDRTAYGQGLADEFKKAAEASGLKVVATEYTNDKATDFKAILTKIKSTKAELVFYGG 243 Query: 225 YYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQG 283 + G M +Q + +G+K +F+G +GV + G+A EG ++P + ++ Sbjct: 244 MDAQGGPMAKQMKELGIKAKFLGGDGVCTPEFMKLGGEATEGNFCSLPGQPLEKLAKGPE 303 Query: 284 IVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 + Y Y AV +A +++R S +P+ + + + V + + Sbjct: 304 FREKFTKKFNAEIQLYAPYVYDAVMVMADSMKRADSVDPVKFLPAIGQTKYDGVTALIEF 363 Query: 344 DEKGDLKGFDFGVFQWH 360 D +GDLKG ++Q+ Sbjct: 364 DPQGDLKGGAISIYQYK 380 >UniRef50_B6ISN6 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=5 Tax=Proteobacteria RepID=B6ISN6_RHOCS Length = 372 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 133/355 (37%), Positives = 201/355 (56%), Gaps = 2/355 (0%) Query: 9 IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLV 68 A+ ++ A A+ V + ++G +A G+ GA QA+ DINA GG+ G+ L Sbjct: 13 AVLATAILMAGPAAAETA-VGLAAPLTGQLAAVGEQLRRGAEQAVADINAAGGVLGEPLR 71 Query: 69 GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPE 128 + DD P QAVAVAN++ +G+ V+GHL S +T PAS +YEDEGI+ I+P AT+PE Sbjct: 72 LIPADDGGVPAQAVAVANRLATEGVALVVGHLQSGTTIPASQVYEDEGIVTITPTATSPE 131 Query: 129 LTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAA 188 +T+ + RT G D QG A ++ +R+A++HD+ YG+GLA + + + A Sbjct: 132 VTEGDRTLVFRTCGRDDQQGDVAGGWLARHFAGRRVAVVHDQTTYGKGLADATRAAMAAK 191 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 N V + +T GE+DF+AL+ R+K N+D VY+GG Y E ++RQAR G+ F+ Sbjct: 192 GLNDVLYTSLTLGERDFTALVTRIKAANVDAVYFGGLYTEAALLIRQAREAGVTALFVSG 251 Query: 249 EGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQ 308 + + IAG AAEGM +T P Q ++ L+A+ +P G Y YAAVQ Sbjct: 252 DTLATDEFQAIAGPAAEGMTMTFSADARAKPEAQDLIARLRANGGEP-GAYTLYAYAAVQ 310 Query: 309 SLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADG 363 A A E+ GS + + L+ TV+GPL +D KGD D+ +++W + G Sbjct: 311 VWAKAAEKAGSTDGARVAATLRQGDYATVVGPLAFDAKGDRTSTDYVMYRWGSAG 365 >UniRef50_A0B322 Extracellular ligand-binding receptor n=3 Tax=Burkholderia cenocepacia RepID=A0B322_BURCH Length = 599 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 99/352 (28%), Positives = 160/352 (45%), Gaps = 5/352 (1%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDKLV--GVEYDDACDPK 79 AD + V GA++G A +G+ G R AI +INA + G + DD DPK Sbjct: 245 ADTVVVGFAGALTGAQAHFGEDSARGIRLAIDEINAGHPSVAGHPVTFALDAQDDQADPK 304 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A VA + V+ + VIGH S ++ + +Y I ++P ATNPE T+ GY+ R Sbjct: 305 VATTVAQRFVDTHVSAVIGHQNSGTSIAVARLYATANIAELTPSATNPEFTRLGYRTTFR 364 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 D G A+Y +E + +RI ++ D+ YG+G+A GL A+ A VV + T Sbjct: 365 LLANDDFLGQAVARYAVEQLHARRIGVVDDRTAYGQGIADVFVGGLGASGATVVAREYTT 424 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 DF A + LK + D +++GG + G ML+Q R + + +G +G+ + + Sbjct: 425 DKAFDFGAPLTLLKGKAPDAIFFGGMDTQGGPMLKQMRKLRIAAPLLGGDGLCTHEILKL 484 Query: 260 AGDAAEGMLVTMPK--RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERT 317 AGDA +G LV + P P Y Y A+ ++ A+ Sbjct: 485 AGDALDGNLVCADGGRSLAKMPGGPAFAARFTQKYGAPVQLYAPYAYDAMMAVYHAVMLA 544 Query: 318 GSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 S +P +V L V G + +D +G+L+ + + T ++ Sbjct: 545 QSTDPAKIVDALHRVDFQGVTGRIAFDARGELRNPAATISTFKGGNKVTLSE 596 >UniRef50_B1HNQ1 Branched chain amino acid ABC transporter (Substrate-binding protein) n=15 Tax=Bacteria RepID=B1HNQ1_LYSSC Length = 406 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 11/355 (3%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 IK+ +SG +A +G GA A+K+IN GGI G K+ ++ D+ + +A A Sbjct: 50 TIKIGANLELSGNVASYGSSIGLGAELAVKEINDAGGIDGKKIELIKVDNKSENSEATAA 109 Query: 85 ANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT----QRGYQHIMR 139 A K+ D + ++ S +T I I +++ T P +T ++ R Sbjct: 110 AIKLATQDKVVAMLAPATSGNTVATVQIANQNKIPIVTGSGTAPNITVNEDGSVNEYAFR 169 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFDGI 198 T +D QG AA + + + +AI D Y +GLA+S ++ + + +V + Sbjct: 170 TCFIDPFQGIVAANFASGELSAKNVAIFADNASDYAKGLAKSFKETMTKSGGKIVKEEAY 229 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 A + DF + +K N DF++ GYY E+G +++QAR +G+ MG +G + +L + Sbjct: 230 VAKDTDFRTQLTNIKAANPDFIFIPGYYEEVGLIVKQAREMGIDVPLMGADGWDSPTLVD 289 Query: 259 IAG-DAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDP-SGPYVWITYAAVQSLATALE 315 +AG DA +T D D Q V A KA D + + Y ++ +A A++ Sbjct: 290 LAGKDALNNTYITNHYSAEDPDKKIQDFVKAFKAANGDKAPDAFNALGYDSIYYIADAIK 349 Query: 316 RTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 R GS + A+ +L A + V G + DE + V ++ +K Sbjct: 350 RAGSTDGEAIKNELAATKDLSLVTGTFSVDENHNPIKTA-TVLEFKDGKQVFNSK 403 >UniRef50_Q141F0 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q141F0_BURXL Length = 383 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 104/362 (28%), Positives = 165/362 (45%), Gaps = 6/362 (1%) Query: 6 KTIIAGMIALAISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 + G I AD +K+ ++G A +G NG R AI++ NA+ Sbjct: 10 LALFVGAIFAVAPPATFADDLPVKIGFAAPLTGANAGYGKDLENGVRLAIEEANAQKIKI 69 Query: 64 GDKL---VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GDK+ V DD DP+ V A K+V+ G+ V+GH S +T PAS IYE GI +I Sbjct: 70 GDKVAQFQIVSEDDQADPRIGVQAAQKLVDSGVSAVVGHFNSGTTIPASQIYEQAGIPVI 129 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 P ATNP +T RG+ + D A Y ++ K +RIAII D+ +G+G A Sbjct: 130 DPAATNPVITGRGFANTFMVISTDGQNAGNAGVYAVQVTKAKRIAIIDDRTAFGQGEADE 189 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + +KA +++ + DFS I +LK N D +++GG + ++ + +G Sbjct: 190 FEKAVKAHGGSIIAREYTDNKAVDFSTQITKLKSANADLIFFGGLDTQAAGFAKRMKQLG 249 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPY 299 + Q +G GV + +AGD++EG++ R Q P + K Y Sbjct: 250 MNAQLVGGGGVMDQDFIKLAGDSSEGVMAWEYGRPLAQLPGGKDFSAKFKKRFGVDILSY 309 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 Y + A+++ S P LKA + V G +++D G LK ++Q Sbjct: 310 APFGYDGAWAAIKAMQQAKSASPNVYRPVLKAIDFDGVTGKISFDSTGALKSGASTLYQV 369 Query: 360 HA 361 + Sbjct: 370 KS 371 >UniRef50_A8U523 Putative ABC transporter, branched chain amino acid-binding protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U523_9LACT Length = 381 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 16/369 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAM----ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 MK+ +A + LA + A AD+IK+ + +G ++ +G E N + A+K+I Sbjct: 1 MKKRLVMGVAALSLLATACGAGSGSNADEIKIGSMFEKTGEVSAYGTAEANAVKLAVKEI 60 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDE 115 N GGI K+ VEYD D +A ++A K+ D + ++G + + + ++ Sbjct: 61 NDNGGILDKKIDLVEYDTKSDNTEAASIATKLATQDEVSIIVGPATTGAVKASTPAVTRA 120 Query: 116 GILMISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ 171 G+ +++P T+ LT + +I RT+ DS QG A++ + ++ +I D Sbjct: 121 GVSLVTPSGTDDSLTIDENGKVQPNIFRTSFQDSFQGIALAEFATNELGAKKALVIGDSS 180 Query: 172 -QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 Y GL ++ + + +V + TA + DFSA++ R+K + DF++ GYY + G Sbjct: 181 SDYALGLTKAFE---GKFDGEIVAEENFTADDTDFSAILTRIKDLDFDFIFLPGYYNQAG 237 Query: 231 QMLRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKRYD-QDPANQGIVDAL 288 +++QAR +G+ +G +G GN +L +AG D + + + + +D + + A Sbjct: 238 LIIKQAREMGITQPILGADGFGNEALLELAGVDNVDDVYYSAHYSPNSEDAQVKEFIAAY 297 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKG 347 KA+ + + Y V +A A+E P AL K L+ + V G ++DE Sbjct: 298 KAEYDVDPDMFAALAYDTVYLVAQAIEAADDTTPKALTKALEDITEFDGVTGTFSFDENH 357 Query: 348 DLKGFDFGV 356 + + Sbjct: 358 NPVKSTLVI 366 >UniRef50_C7RS11 Extracellular ligand-binding receptor n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS11_9PROT Length = 365 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 141/342 (41%), Positives = 197/342 (57%), Gaps = 3/342 (0%) Query: 28 VAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANK 87 VA+ G M+G A GD GA AI DINAKGG+ G KL DDACDPKQAVAVAN Sbjct: 26 VAIAGPMTGQYASAGDQIKKGAEMAITDINAKGGVLGQKLKLEIGDDACDPKQAVAVANT 85 Query: 88 IVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQ 147 +VN I ++ GH CSSST PASD+Y + I M++ +TNP++T RG ++I AG D Q Sbjct: 86 MVNKKIVFMHGHWCSSSTIPASDVYNEAQIPMVT-VSTNPKVTDRGLKNIFAIAGRDDQQ 144 Query: 148 GPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSA 207 G A Y+ E K ++IA++ DK YG+GLA V ++A A + ITAGEKD+S Sbjct: 145 GQVAGAYLAENFKGKKIAVVDDKSAYGKGLADEVAKAMEAKGAKPALRESITAGEKDYSG 204 Query: 208 LIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGM 267 L+++LK ++ + +GGY+ E+ +LRQA+ GLK MG + + N+ L+ AG A + Sbjct: 205 LVSKLKSARVEVMAFGGYHTEVALILRQAQQAGLKLTIMGGDTMSNSELATAAGAQANNV 264 Query: 268 LVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVK 327 L T ++P+ +V K +P G YV YAA Q A + S + L K Sbjct: 265 LFTFGPDARKNPSAAAVVKKFHDAKIEPEG-YVLYAYAAFQLFDQAAVKAKSTKYGDLEK 323 Query: 328 DLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 L++ +TVIG +++D G+ F V+QW DG K Sbjct: 324 ALRSGTFDTVIGKISFDANGNSSAPAFVVYQWK-DGKYDYVK 364 >UniRef50_C6J274 Branched-chain amino acid transport system,substrate-binding protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J274_9BACL Length = 375 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 95/360 (26%), Positives = 171/360 (47%), Gaps = 14/360 (3%) Query: 1 MKRNAKTI-IAGMIALAISHTAMADD-------IKVAVVGAMSGPIAQWGDMEFNGARQA 52 MKR + I G+ A +S +DD I++ + +SG AQ+G NGA A Sbjct: 1 MKRFLSALAITGLAAGLLSGCGASDDSQANRDTIRIGLAAPISGTQAQYGTAFKNGAELA 60 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDI 111 IN GGI G ++ V DD D +AV VANK V D I V+GH SS+T + + Sbjct: 61 AAQINEAGGIDGKQVEIVVQDDKGDSNEAVNVANKFVTDKSILGVVGHFNSSATLATAPV 120 Query: 112 YEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ 171 Y I+ +SP ++ P +T G ++ R D+ Q A + + + ++A+I+++ Sbjct: 121 YNKNKIVQVSPSSSAPAVTNAG-EYTFRVITTDAFQADYLAGW-SKELGYSKVALIYEQS 178 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 +G GL Q VV + G+KDFS ++ +++++ D ++ GG+Y E Sbjct: 179 DFGLGLLDVYQQSAPENGVEVVAAEAYNPGDKDFSTVLTKIREKQPDAIFIGGFYNEAAL 238 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGM-LVTMPKRYDQDPANQGIVDALKA 290 + +QA+ + L F+G + + + +L ++ ++ EG L+ + + +A Sbjct: 239 IAQQAQKLNLNADFIGVDSLYSEALLDLGKESVEGFKLIGFFYPGGDNAEATRFDEEYQA 298 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGDL 349 Y +Y A + A++ G + A+ L+ ++ G +++DE GD+ Sbjct: 299 KYNSKPDTYAAYSYVATSVIIKAIQEQG-TDREAIKSYLETLKDYSSATGVISFDENGDV 357 >UniRef50_Q13IE6 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13IE6_BURXL Length = 376 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 87/356 (24%), Positives = 152/356 (42%), Gaps = 2/356 (0%) Query: 7 TIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 + LA A+ +++ ++ ++G +A G + NGA+ A+ +IN GG+ G Sbjct: 5 LCVTAAGTLACQAARAAEPVRIGLIQPLTGSVAYNGHADVNGAKLAVAEINKAGGVLGRP 64 Query: 67 LVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT 125 + D C+P V A K++ D + +IG CSSST + + + +++ ++ Sbjct: 65 VELKIEDGQCNPANTVNAAEKLIQKDRVSALIGAFCSSSTAAIMPVAQKYHLPLVTGVSS 124 Query: 126 NPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGL 185 +LT++G R A D A I+ T++ + +A + +G G + Q L Sbjct: 125 EADLTEKGNPWFFRAAETDQLLAHAFAPTIIRTLQLKSVAYVGVNDDWGRGSVQEFQQSL 184 Query: 186 KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQF 245 +A V D G DF L+ +L+ D V+ + +++Q + +GL + Sbjct: 185 QAGGVKTVSTDYFDHGATDFYTLLTKLRASGADAVFVAAETQDGSILVKQIKELGLHIKV 244 Query: 246 MGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITY 304 G A ++AG AAEG+ +P P N V + + K G Y Y Sbjct: 245 FGVGSWATADFIDLAGPAAEGVYAAVPYASTLTTPENTAFVASYQTAYKAAPGKYSAAGY 304 Query: 305 AAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 AV+ +A A+ R GS + + L G + KG GF + Q H Sbjct: 305 NAVEIVAKAIARAGSTDADKIRAALAQTDFAAPNGRYRFTAKGQAYGFSVVLVQIH 360 >UniRef50_A9BYU2 Extracellular ligand-binding receptor n=2 Tax=Comamonadaceae RepID=A9BYU2_DELAS Length = 376 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 113/376 (30%), Positives = 183/376 (48%), Gaps = 11/376 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 MK + K IA ++A + AMA + I++ +G +SGP A +G NG R AI ++NA Sbjct: 1 MKMSRKLCIAAVVA-GMGGVAMAQEQVIRIGHIGPVSGPQANFGKDNENGVRMAIDELNA 59 Query: 59 KG-GIKGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDE 115 KG I G K+ V DD DPKQ A A K+ +D + + L S P+S +++D Sbjct: 60 KGMEIAGKKVKFQLVAEDDVADPKQGTAAAQKLCDDKVAGAVAFLNSGVAIPSSKVFQDC 119 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 GI MI+ ATNP+LT+ G+ R D++ G AKY ET+K + +AII D+ YG+ Sbjct: 120 GIPMITGAATNPDLTKPGWNTTYRVIANDNALGAALAKYAAETLKLKTVAIIDDRTAYGQ 179 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GLA + + VV + DF A++ +K + + ++YGG Y + G MLRQ Sbjct: 180 GLANVFKKDAEKLGVKVVASEFTNDKATDFMAILTSIKAKKPEGIFYGGMYGQAGPMLRQ 239 Query: 236 ARSVGL-KTQFMGPEGVGNASLSNIAGDA--AEGMLVT-MPKRYDQDPANQGIVDALKAD 291 +GL ++ G +G+ L+ +A A + ++ + P A Sbjct: 240 MAQLGLNDAKYFGGDGLCVPELAKVAAGAKPLDNVICADGGASLAKMPGGTEWKKRYDAK 299 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKG 351 Y Y A LA A++R S +P + L+ + V + +++ G++K Sbjct: 300 YPGQFQVYSPYFYDATMMLADAMKRANSWDPKVYIPFLQKADYSGVTSKIAFEKNGEMKN 359 Query: 352 FDFGVFQWHADGSSTA 367 + + + +G TA Sbjct: 360 PSYTLSVFK-NGQKTA 374 >UniRef50_D1B9T5 Extracellular ligand-binding receptor n=2 Tax=Synergistaceae RepID=D1B9T5_THEAS Length = 384 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 11/359 (3%) Query: 17 ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDAC 76 +AMA +IK+ + A++G A +G E A+ A+++INAKGG+ G+KLV V YD Sbjct: 18 FVGSAMAGEIKIGYLAALTGDYAGYGQTELRAAQLAVEEINAKGGVLGNKLVLVPYDWRT 77 Query: 77 DPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT----Q 131 + AV ++++ D + +IG S + + I + I +TNP +T Sbjct: 78 RAEDAVNAVRRMIDQDKVVAIIGANASGANIATAPIVNKAKVPQIGTVSTNPLVTVDEKG 137 Query: 132 RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANA 190 + + R D QG A + ++ A+++D Y +GL + Sbjct: 138 KVRPYSFRICFTDPYQGKVLANLAAVKLGKKKGAMLYDVASDYSQGLREFCIKEFEKLGG 197 Query: 191 NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 +V + + DF A + ++ D ++ G +M +++QAR +G+K + Sbjct: 198 KIVADEAYKGTDTDFRAQLTNVRNSGADVLFLPGMGKDMALIIKQARELGMKDLVIMGGD 257 Query: 251 VGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV--WITYAAVQ 308 + IAG+A G + DP Q A K KD +V + Y +V Sbjct: 258 GYADFMYEIAGNALVGTYWVNHTSLE-DPGMQPFFKAYKEKYKDECKEFVNGVLAYDSVY 316 Query: 309 SLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEK-GDLKGFDFGVFQWHADGSS 365 LA A++R G + A+ + L+ L+ + K + + + DG + Sbjct: 317 WLADAIKRAGKVDGTAIAQALEKTKDLKLHHAVLSINPKDHNPLNKTAVILRVEKDGKA 375 >UniRef50_A5N0V5 LivK n=2 Tax=Clostridium kluyveri RepID=A5N0V5_CLOK5 Length = 378 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 82/346 (23%), Positives = 150/346 (43%), Gaps = 4/346 (1%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 + ++ ++ + +++IK+ V ++G ++ G N + ++ NA GGI Sbjct: 9 SMALVLGSVVLAGCGKQSESEEIKLGAVFPLTGDVSVMGQACKNALQMLEEETNASGGIN 68 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G K+ DD P + K++ N+ + V+G S + I I MIS Sbjct: 69 GKKVKFYFEDDENKPSNSANAIQKLINNNKVVGVVGSYASKCSISMGPIAASNKIPMIS- 127 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSV 181 +T+P++T+ G +++ + D+ QG A + VK + A+++D Y +GL Sbjct: 128 VSTSPKVTKNGGEYVFTSTFNDTFQGTIIADIAAKDVKAKTAAVLYDVGNDYDKGLNEFF 187 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + + V+ AG++DFSA + +KK N D + YY + + +QAR++G+ Sbjct: 188 TTNFEKSGGKVLASLTFNAGDQDFSAQLTNIKKLNPDVLVIPDYYGTVALIAKQARNLGI 247 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYV 300 + F+G +G + +L IAGDA G + D PA + + Sbjct: 248 TSTFIGGDGWDSPALFEIAGDAVNGSYFSNFFSTGDTTPAYVKFKENYEKKYNKAPDAIS 307 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEK 346 +Y A L A++ S E + LK V G +D Sbjct: 308 ASSYNAGSLLIAAVKEAKSTEGDKIKDALKNISFEGVAGTTKYDSN 353 >UniRef50_C4FV28 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FV28_9FIRM Length = 384 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 91/366 (24%), Positives = 162/366 (44%), Gaps = 10/366 (2%) Query: 1 MKRNAKTIIAGMIALA-ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA- 58 K+ + AG++ + ++ + D +KV +SG A +G G + A+K N Sbjct: 3 FKKLGTALFAGLLLASPLATVSAQDTVKVGGNFELSGAAAAYGTPMAYGLKLAVKQYNEE 62 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G K+ D+ D +A A A K+V G+ ++G + + D Sbjct: 63 NGGVNGKKVEAQVEDNKSDKTEAAAAATKLVAAGVAGIVGPATTGDALAEIPVANDGKTP 122 Query: 119 MISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQY 173 I P AT +T + Y +I R DS QG AA Y+ +T +++ ++ D+ Y Sbjct: 123 AIFPAATGNGITLDSAGKVYDYIYRVCFEDSFQGVAAANYLADTQGYKKVVLLVDQANDY 182 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 +GLA S +A +V + + DF ++ + ++ D +Y GYY E G ++ Sbjct: 183 SQGLADSFTKQFEAKGGTIVAKESYQTNDTDFLTVLTNISTQDFDALYVPGYYTEAGLII 242 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ--DPANQGIVDALKAD 291 +QAR +G+ +G +G N +L +AG + D+ DPA + V+A + + Sbjct: 243 KQARELGIDKPIVGGDGFANDTLVELAGKDNLNNVFYTSHYSDKSDDPAVKKFVEAYEKE 302 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLK 350 + ++Y A L A++ GS +P + K L V G ++DEK + Sbjct: 303 YGKKPDTFAALSYDATNVLLQAIKDAGSTDPQEVNKALAKIKDFKGVTGTFSFDEKHNPV 362 Query: 351 GFDFGV 356 + Sbjct: 363 KTAVML 368 >UniRef50_D1U8G6 Extracellular ligand-binding receptor n=2 Tax=Desulfovibrio RepID=D1U8G6_9DELT Length = 383 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 114/348 (32%), Positives = 177/348 (50%), Gaps = 6/348 (1%) Query: 23 ADDI-KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK-LVGVEYDDACDPKQ 80 AD I K+ + ++GP A G+ G A+ + A+GGI G +V V D ACDPKQ Sbjct: 29 ADQILKIGTLSPLTGPYAADGNDIKQGTEAAVAVMKAQGGIPGYTDIVVVPTDSACDPKQ 88 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 AVA ANK++ND + VIG CSS+T PAS+ +E I+MI+P +T+P +T+RG ++ RT Sbjct: 89 AVAAANKLINDKVPAVIGAYCSSATIPASETLAEENIIMITPASTSPTVTERGLPYMFRT 148 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 G D Q P A K++ E + + I+ DK Y +G+A V K A V+ D + Sbjct: 149 CGRDDHQAPAAVKFMKEVENVKTVFIVDDKTTYSQGMADGVAAAAKEAGIEVLGHDHVNQ 208 Query: 201 GEKDFSALIARLKKENIDFVYYGG-YYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+KDFSA++ +K +N D Y M+ QAR +G+ MG + V + L Sbjct: 209 GDKDFSAVLTMVKDKNPDLFYISLQNSSSGATMVIQARRMGITAILMGQDAVYHPKLIEF 268 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 A +EGM T + + +P G Y +Y + + A++ G+ Sbjct: 269 AKADSEGMFCTFGDIDTDTQGYKDFKANYSSKYSEP-GAYSAYSYDSAMAYMLAVKAAGT 327 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 +P + ++L + +++DEKGD G ++ V+Q DG Sbjct: 328 TDPAKVREELLKLSFDGASKKVSYDEKGD-SGSNYTVYQVK-DGQFVP 373 >UniRef50_C6BVT9 Extracellular ligand-binding receptor n=3 Tax=Deltaproteobacteria RepID=C6BVT9_DESAD Length = 377 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 114/368 (30%), Positives = 189/368 (51%), Gaps = 7/368 (1%) Query: 1 MKRNAKT-IIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MKR+ T ++ I + + A +KV +G ++GP A G+ NG A++ + A Sbjct: 1 MKRSMMTALLVAAILMLSAGMVFAKTLKVGTMGPLTGPYAADGNDIKNGVLTAVEVVKAN 60 Query: 60 GGIKG-DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G D++V + D AC+P+QAVA ANK++N+ V+G CSS+T PAS++ ++E I+ Sbjct: 61 GGIPGFDEIVVLPQDTACEPRQAVATANKLINEEANGVVGAYCSSATLPASEVLDEESIV 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 MI+P +TN ++T RG ++ R G D QG A K++ E + + + I+ DK Y +GLA Sbjct: 121 MITPASTNEKVTSRGLPYMFRMCGRDDDQGAIALKFMQEKLGAKSVYIVDDKTAYSQGLA 180 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGG-YYPEMGQMLRQAR 237 V+ AA V+ + + G+KDFSA++ ++K N D Y ML QA+ Sbjct: 181 DGVEKMCNAAGIKVLGHEHVNQGDKDFSAILTKVKNTNPDVFYMSMQNSATGALMLIQAK 240 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSG 297 +G+K + + V + L IA DAAE + +T + PA + + +P G Sbjct: 241 RMGIKAARLAQDAVYHPQLIEIAKDAAEDVYLTFGYIDSEAPAYKEFYAKYQPKHGEP-G 299 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 Y Y + + A+ GS +P + +L + + + GD G ++ + Sbjct: 300 AYSGYAYDSAMAYFKAVTAAGSTDPDKVKAELMKLDYDGATKHIKFKPNGD-SGSNYIIR 358 Query: 358 QWHADGSS 365 + DG Sbjct: 359 KV--DGGK 364 >UniRef50_B8J3K0 Extracellular ligand-binding receptor n=10 Tax=Deltaproteobacteria RepID=B8J3K0_DESDA Length = 405 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 92/384 (23%), Positives = 169/384 (44%), Gaps = 20/384 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAMA--DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 + K + A ++L + A+A IK+ ++G I + G+ A ++INA Sbjct: 16 FMKLFKLVTACALSLFVGQAALAAEKPIKIGFPIPLTGEIPKVGEGSKFAAEMLKEEINA 75 Query: 59 KGGIK-GDK---LVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYE 113 KGG+K GDK L + D+ P+ AV V K++ D + ++G S PA + Sbjct: 76 KGGLKVGDKYYPLEFIYEDNESKPESAVNVTLKLIARDKVHAIVGPQSSRQAVPAGGVAN 135 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQ 172 DE + +I+P +TNP+ T G + R A LD Q P A + + ++ A++ + Sbjct: 136 DEEVPLITPWSTNPDAT-NGRPWVFRGAFLDPFQAPVAVDFATKQFNAKKAAVLFEVSND 194 Query: 173 YGEGLARSVQDGLKAANAN--VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 Y +GLA + ++ + + VV + ++DFSA + ++ DF++ Y Sbjct: 195 YSKGLADNFKEAFEKTHGKGSVVAMESHGPKDQDFSAQLTKIIAAKPDFIFVPENYSFAA 254 Query: 231 QMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP-ANQGIVDALK 289 ++ QAR +G K FMG + G+A L N+ G G + + + +D K Sbjct: 255 LIVPQARDLGYKGPFMGSDAWGSAELFNLCGKDCVGQYFSTHYTAEGATGKTREFIDKYK 314 Query: 290 ADKKDPSGPYVWITYAAVQSLATALERTGSDEP-----LALVKD--LKANGANTVIGPLN 342 A +T+ ++ + A++ G +P +++D + + G + Sbjct: 315 AKYGYVPDDVAALTWDSINIVLQAIQNAGKVDPDLKKQRKIIRDNMAAIENFDGITGSMK 374 Query: 343 WDEKGDLKGFDFGVFQWHADGSST 366 +D+ GD V + GS Sbjct: 375 FDDNGDPIKCAVIV-KVTDSGSFA 397 >UniRef50_Q39AQ6 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=92 Tax=cellular organisms RepID=Q39AQ6_BURS3 Length = 428 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 108/363 (29%), Positives = 178/363 (49%), Gaps = 6/363 (1%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA-KGG 61 + + +A AL+ +H AD +K+ ++GP + +G G + AI D NA + Sbjct: 54 KVSHVALAAACALSGAHAIAADVVKIGFAAPLTGPQSNYGTDMQKGVQLAIADFNATRPT 113 Query: 62 IKGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 I G + DD DP+ VA ++++D ++ +IGH S ++ PASD+Y+ G+ Sbjct: 114 IGGKPVTFQLDSQDDQADPRTGTTVAQRLIDDNVRGIIGHFNSGTSIPASDLYDRAGLPQ 173 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 IS AT+P+ T RGY+ R D+ G Y ++T++ +RIAII D+ YG+G+A Sbjct: 174 IS-MATSPQYTARGYKTTYRLLTSDAQAGRIVGTYAVKTLRFKRIAIIDDRTAYGQGIAD 232 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 ++AA ++ D DFSA++ LK N D ++YGG + M+R+ R + Sbjct: 233 EFAKAVEAAGGTIIKRDFTNDKALDFSAILTNLKGMNPDAIFYGGGDAQSSPMIRKMRQL 292 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGP 298 G+K+ F+ E + + + GDAAEG +V M ++ P G KA + Sbjct: 293 GMKSAFVTGEMSRSPTFLKVGGDAAEGAIVYMGGLPKEKMPGFSGYAARYKARFNEDVIT 352 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP-LNWDEKGDLKGFDFGVF 357 Y Y +L TA++ S +P L V P + +D KGDLK ++ Sbjct: 353 YSPYAYDGTIALLTAMKDANSTDPKVYTPYLGKLSVKGVSAPSIAYDTKGDLKDAPVTIY 412 Query: 358 QWH 360 + Sbjct: 413 KVE 415 >UniRef50_C0CMD4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CMD4_9FIRM Length = 387 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 91/369 (24%), Positives = 168/369 (45%), Gaps = 23/369 (6%) Query: 1 MKRNAKTIIAGMIALAI----------------SHTAMADDIKVAVVGAMSGPIAQWGDM 44 +K+ ++ + +++ + +D I + M+G +A G+M Sbjct: 3 LKKMLSVLLVSAVLVSMMACGGETESSSDGGEKASAGGSDTITIGASLPMTGSVALNGEM 62 Query: 45 EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKI-VNDGIKYVIGHLCSS 103 G + A+ + N GGI G ++V DD +P QA +VAN + ++ I +IG L SS Sbjct: 63 ILEGIQMAVDECNEAGGIDGKEVVIDAQDDQAEPNQAASVANMMSADEKIVAIIGSLKSS 122 Query: 104 STQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR 163 T A+ IYE+ G++ +SP +++PE+T G ++I R D T AK + + Sbjct: 123 CTLAAAPIYEEAGVVALSPDSSSPEVTNAG-EYIFRIKNSDVVLAQTMAKGAISD-GHTK 180 Query: 164 IAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG-EKDFSALIARLKKENIDFVYY 222 AI+++ YG G+ Q ++ A +V + I G + DFS++I+++++ D + Sbjct: 181 FAILYENNDYGAGVLEQSQIAIEEAGCEIVCTESILTGEQTDFSSIISKIRESGADAILM 240 Query: 223 GGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLV-TMPKRYDQDPAN 281 G Y E G +++Q + GL +G+ + + G+AA+G V T DQ Sbjct: 241 GVDYNESGLVMKQMKDAGLDLPRYATDGLFTDAFIEVGGEAADGTTVLTSFITSDQSENV 300 Query: 282 QGIVDALKADK-KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP 340 Q + + + + Y + + A+E G + A+ + V G Sbjct: 301 QNFIKKYQEKYDGEMPSIFQAEGYDCGKIVIEAIENAG-TDRKAIRDYMATMSYQGVTGD 359 Query: 341 LNWDEKGDL 349 +DE GD+ Sbjct: 360 CTFDENGDV 368 >UniRef50_B0TD42 Branched chain amino acid abc transporter, amino acid-binding protein n=2 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TD42_HELMI Length = 400 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 93/372 (25%), Positives = 169/372 (45%), Gaps = 19/372 (5%) Query: 4 NAKTIIAGMIALAISH----------TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAI 53 A + GM+A ++ T A +I + +SG A +G NG + I Sbjct: 12 LALLVSVGMLASSVLTGCSSGKGAQNTPEAKEIIIGGNYELSGGNATYGTAAVNGIKLYI 71 Query: 54 KDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIY 112 D+N KGG+ G K+ V D+ + +A VA +++N + + ++G SSST + Sbjct: 72 DDLNEKGGLLGKKVKFVSLDNKSEAGEASNVAARLINQEKVVAILGGAASSSTVGFVKLA 131 Query: 113 EDEGILMISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH 168 D+ I +IS A E+T + ++ R QG A+Y L+++K ++ AI+ Sbjct: 132 NDKKIPVISSSAVAQEVTVDETGKTRDYVFRACFTAPFQGEVMAQYALDSLKLKKAAILV 191 Query: 169 DK-QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYP 227 D Y +G ++ +D VV +G G+KDF +++ R+K + + +Y GYY Sbjct: 192 DNQSPYSKGSGKAFKDYFVKNGGQVVAEEGYVTGDKDFRSVLTRIKGRDAELIYVPGYYE 251 Query: 228 EMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKRYDQDPA-NQGIV 285 E G +++QA + + +G +G + +L+ IAG + + ++ A Q + Sbjct: 252 EAGFIVKQASELVMTLPILGGDGWDSPTLAKIAGAENLNNTFFSTHYSEEEKSARVQDFI 311 Query: 286 DALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWD 344 A KA + + Y A L A++R S +P + + L A V G +++D Sbjct: 312 AAYKAKYGENPEALGALGYDAAAILVDAIKRANSTDPEKVREALSATKDLQAVTGTISFD 371 Query: 345 EKGDLKGFDFGV 356 + + V Sbjct: 372 AQHNPVKSAVVV 383 >UniRef50_Q0ATW1 Branched chain amino acid ABC transporter (Substrate-binding protein) n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0ATW1_SYNWW Length = 392 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 157/350 (44%), Gaps = 10/350 (2%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A + I V + +SG +A +G NG AI++IN GG+ G +L +E D P + Sbjct: 38 AAVETIPVGINVELSGDLASYGSNSRNGMVLAIEEINQAGGVLGKELKYIERDCQSKPDE 97 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-----QRGYQ 135 A+ + + + I +G L S + ++ + I +I+P AT +T + Sbjct: 98 AMNNSAALAGEKIIAQLGPLTSGAVAGSTPVMMQNKIPLIAPAATAENVTVEEKTGKTLD 157 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVF 194 +I R LD+ Q A++ L +K + I Y +GLA+ ++ A +V Sbjct: 158 YIFRVCYLDADQARRMAEFALNDLKVKNAVIFGSTSDDYAKGLAKYFEEAFVAGGGKIVA 217 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 +G G+KDF A + +L+ +N +F+Y GYY E+ +++QAR + +K G +G + Sbjct: 218 KEGYVNGDKDFKATLTKLRSKNPEFIYVPGYYTEVALLIKQARDLDIKVPIGGGDGWDSP 277 Query: 255 SLSNIAG-DAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 + +AG +A D P V A +A K + + Y + + LA Sbjct: 278 DMVKVAGAEALNNTYFANHYSVEDPSPVISSFVKAYEAKYKKLPDSFAALGYDSAKILAQ 337 Query: 313 ALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 A++ G + + + L + G ++ +EK + + V ++ Sbjct: 338 AIKDAGEADSAKVAQALAKIKDFPGITGTMSINEKHNPV-KEIVVIEYKD 386 >UniRef50_B9Z072 Extracellular ligand-binding receptor n=2 Tax=Chromobacterium group RepID=B9Z072_9NEIS Length = 381 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 108/355 (30%), Positives = 162/355 (45%), Gaps = 6/355 (1%) Query: 7 TIIAGMIALAISHTAMADDI-KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG-IKG 64 + GM+A A AD + K+ +SGP A +G N + AI D+NAK I G Sbjct: 13 LALGGMMAPFAIAAAQADTVVKIGFSSPLSGPQAHYGKDNENATKMAIDDLNAKPLTIAG 72 Query: 65 DKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 K+ V DD DP+ VA ++V+ G+K VIGH S + PAS IY D GI +S Sbjct: 73 QKVTFELVSEDDQADPRVGTQVAQRLVDSGVKAVIGHFNSGVSIPASRIYSDAGIPQLS- 131 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 +TNP T GY+ R G DS G +Y + +K QRIA+I D+ YG+G+A Sbjct: 132 VSTNPAFTTAGYKTTFRLVGSDSQVGGALGRYAVAQLKAQRIAVIDDRTAYGQGIADEFI 191 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 ++ V + DF+A++ LK + D ++YGG + M +Q + +GL Sbjct: 192 KSIQGLGKQPVKREYTNDKASDFTAILTSLKAAHPDVIFYGGADAQAAPMAKQMKRLGLN 251 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDALKADKKDPSGPYVW 301 + MG + + + +AG A G +P PA + KA K Sbjct: 252 AKLMGGDMLSTPTFIKLAGADAVGHFSAVPGGELGARPAGKDFEARYKARYKQDVVLLGP 311 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGV 356 Y V +A A++R S EP + + V ++D G+LK + Sbjct: 312 QFYDGVMIVADAMKRANSTEPAKFLPLIAKTAYKGVTADFSFDSAGNLKHAPVTI 366 >UniRef50_Q5SIN9 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=2 Tax=Thermus thermophilus RepID=Q5SIN9_THET8 Length = 387 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 11/377 (2%) Query: 2 KRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 R ++AG+ AL ++ A ++ IK+A + +SGP A G+ GA A+++ + Sbjct: 1 MRKIGFLVAGVAALGLA-LAQSNVIKIATMSPLSGPQAALGEQIKLGAELAVEEAKERFK 59 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G +LV V YDD +P VA AN+++ND I ++G L S PAS++ ++M+ Sbjct: 60 ALGFELVLVPYDDQANPDVGVANANRMINDPDILGLVGTLNSGVAIPASEVLARVNLVMV 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SP TNP +T R ++ R G D QGP AA+++ +K +R+ +IHDK YG+GLA Sbjct: 120 SPANTNPVVTDRKLPNVNRIVGRDDVQGPAAAEFVYNDLKLRRVFVIHDKTAYGQGLAEE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + +A VV F G + +F +I +++ +N VY+GG Y ++G +Q R G Sbjct: 180 FRKRFEALGGRVVAFIGTEE-QSNFVPIINQIRAQNPQLVYFGGIYSQIGPFTKQLRERG 238 Query: 241 LKTQFMGPEGVGNASLSNIAGD--AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP 298 L+ M +G+ ++ +AG A T+ P + + + KA Sbjct: 239 LRMPLMSGDGLDSSEFERLAGSQNAKGAYYTTVAGPVSAFPQAKALAERFKAKYGKDIEG 298 Query: 299 YVWITYAAVQSLATALERT------GSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 + Y A + + ALE + ++++ + G + +D KGD++ Sbjct: 299 FGIYAYDAARVILAALENAIKANGGKKPTRAQVAQEVRKVKLEGITGTIEFDSKGDIQKA 358 Query: 353 DFGVFQWHADGSSTAAK 369 + V Q G+ K Sbjct: 359 KYFVMQVAGTGNWADNK 375 >UniRef50_C4XSP4 ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSP4_DESMR Length = 388 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 108/380 (28%), Positives = 173/380 (45%), Gaps = 16/380 (4%) Query: 3 RNAKTIIAGM-IALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 R A G+ + LA + AD IK+AV ++G A +G+ G +++INA GG Sbjct: 8 RAALACALGLTLGLAAAPAHAADTIKIAVPTPLTGSAAGYGENVKAGVDLKLEEINAAGG 67 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMI 120 I G KL V +D+ C+P++A V++ IVND I ++GHLCSS+ Y EGI I Sbjct: 68 INGKKLEAVYFDEQCEPREAATVSSSIVNDEAIVAIVGHLCSSAHLAGLPAYVREGIAAI 127 Query: 121 SPGATNPELT-----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 +P ATN ++ ++G R D QG A Y + + +++A+ ++ YG Sbjct: 128 TPTATNTTISTKSKDEKGKAWSFRNVYRDDFQGKFLADYSAKVLGLKKVAVFYENNDYGI 187 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GL + KA VV + G++D++ + +LK + ++ GYYPE + Q Sbjct: 188 GLKDAFIKEAKALGLTVVGEEAYKKGDQDYTPQLTKLKGAAPEAMFIAGYYPEGALIADQ 247 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPA-NQGIVDALKADKKD 294 A+ +GL MG +G N + G +A+ +T P + A + +DA KA K Sbjct: 248 AKKIGLNVAKMGADGFDNLDYVKLGGASADNTYLTAPFLVETAGADAKKFIDAFKAKYKR 307 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKA-----NGANTVIGPLNWDEKGDL 349 Y A +A A+ + G + + L G V G +D GD Sbjct: 308 DVDWMSANAYDAAGIMAEAIAKVG-ADRTKIRDYLAGLDSPEKGYKGVTGVNYFDGNGDC 366 Query: 350 KGFDFGVFQWHADGSSTAAK 369 + + DG A+ Sbjct: 367 LKPAYV--KVVKDGKFVPAE 384 >UniRef50_C7HZL2 Extracellular ligand-binding receptor n=2 Tax=Thiomonas intermedia K12 RepID=C7HZL2_THIIN Length = 382 Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 99/358 (27%), Positives = 172/358 (48%), Gaps = 6/358 (1%) Query: 9 IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLV 68 +A L +S A + + V +SGP+A G NG + A+ +NA+ G K V Sbjct: 12 LALFAGLGLSAQAAEPRVVLGVAVPLSGPLAASGQDAVNGVQMALNQLNAEHARIGGKSV 71 Query: 69 ---GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT 125 DD P QA VA K+V++G+ V+GH S T PA+ IY GI I+P +T Sbjct: 72 RWAMDAEDDQGLPTQATLVAQKLVDEGVSGVVGHQTSGCTFPAARIYARAGIPQITPSST 131 Query: 126 NPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGL 185 +P++ ++GY+ R D++ G A+Y + + QR+A++ D+ YG+GLA Sbjct: 132 SPKIAEQGYKTFFRLIANDNALGAGLAEYAHDALHVQRVAVVDDRTAYGQGLADVFSAKA 191 Query: 186 KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQF 245 K +VV + DFSA++ R+K ++ ++YGG Y + G ++RQ R +G+ + Sbjct: 192 KKLGMDVVDREYTDDKATDFSAILTRIKADHPQVIFYGGMYSQAGPLVRQMRQIGITARL 251 Query: 246 MGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPS-GPYVWIT 303 MG +G+ ++ +AGDA G + + P Q A+ + Y Sbjct: 252 MGGDGICAPIMAKVAGDAVNGTICAQGGAPLSELPKGQAWKARYDAEFGAAAFQLYSPNA 311 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP-LNWDEKGDLKGFDFGVFQWH 360 + A LA A+ + GS +P + ++ + V +++ G+L + ++ Sbjct: 312 FDAAMVLAHAMMKAGSSDPKVCLPYIRHIDYDGVTDSDIHFTATGELADPSITLSEFE 369 >UniRef50_C0GH32 Extracellular ligand-binding receptor n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH32_9FIRM Length = 387 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 97/351 (27%), Positives = 160/351 (45%), Gaps = 7/351 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S+ A++IK+ VG ++G A +G G AI + N GGI G ++ + D D Sbjct: 37 SNNGDAEEIKIGTVGPLTGGAASYGVSVRRGVEIAINEANEAGGINGAQIRLIPEDTGGD 96 Query: 78 PKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 +A +K++ D + +IG + SS T + D G+ MISP +T + Q G ++ Sbjct: 97 ATEAANATSKLIEQDNVSVIIGAVLSSETFAGAPFANDAGVPMISPASTATGIPQEG-EY 155 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 I R D Q A+Y + + R A++ YG L + + VV Sbjct: 156 IFRNTLADEVQAAQLAEYASDELGVSRFAVMFTNNDYGVALRDAFVATAEGLG-EVVEIQ 214 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 T G+ DFSA + R+ + N + ++ GGYY E ++ +QA+ GL Q +G +G + L Sbjct: 215 SFTDGDDDFSAALTRIAQGNPEALFIGGYYEEAARIAQQAQEQGLDVQILGADGFYSPVL 274 Query: 257 SNIAGDAAEGMLVT-MPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 N+ GDA EG + T D A V + + + + Y A + + A+E Sbjct: 275 VNLGGDAVEGAIFTAAFYDGDTADAVVNFVSKFQEEFGETPDMFAAQAYDAARIVLQAIE 334 Query: 316 RTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 GS + A+ L A + G ++D +GD+ + + Q DGS Sbjct: 335 TAGSGDSAAIRDALAAIQDFPGITGVTSFDGEGDVI-KEVLILQV-EDGSF 383 >UniRef50_D1ALD8 Extracellular ligand-binding receptor n=6 Tax=Fusobacteriaceae RepID=D1ALD8_SEBTE Length = 381 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 19/366 (5%) Query: 1 MKRNAKTIIAGMIALAISH----TAMADD---------IKVAVVGAMSGPIAQWGDMEFN 47 MK+ + + L TA A +K+ +G ++G +AQ+G Sbjct: 1 MKKLFSLLAIATLTLVSCGKNADTAAAGTETKTEDKTVVKIGFIGPLTGGVAQYGIATKE 60 Query: 48 GARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQ 106 G I++INA+GGI G KL + DD D K+AV K+V ND + +IG + S + Sbjct: 61 GVELKIEEINAQGGINGKKLELITVDDKGDAKEAVNAYKKLVSNDKVDMIIGAVTSVPSN 120 Query: 107 PASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAI 166 +++ E + + MI+P TN ++T G +++ RT D QG +Y ++IA+ Sbjct: 121 AIAELAEKDKMPMITPTGTNIDITG-GKKYVYRTTFTDPFQGAVMGRYATAK-GFKKIAV 178 Query: 167 IHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGY 225 + + Y GL++S + K A ++ + T +KDF +++ +K N+D +Y Y Sbjct: 179 LTNKSDDYSTGLSQSFIEEAKKGGAEII-ENSYTKEDKDFKSILTNIKNANVDAIYIPDY 237 Query: 226 YPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIV 285 Y +G + QA+ +G+ QF+G +G +N A + V+ D+ P Q + Sbjct: 238 YETIGLIATQAKELGINAQFLGGDGWDGVQ-TNFAAVTDGALFVSQYAANDESPLVQNFI 296 Query: 286 DALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDE 345 A K + + Y V+ +A AL+ +L++ KA + V G L +DE Sbjct: 297 KAYNEKYKKDPILFAALGYDTVEIIANALKTAKDSSADSLIEAFKATDLDLVTGKLVFDE 356 Query: 346 KGDLKG 351 D K Sbjct: 357 NNDPKK 362 >UniRef50_B1I4I1 Extracellular ligand-binding receptor n=4 Tax=Clostridiales RepID=B1I4I1_DESAP Length = 386 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 92/358 (25%), Positives = 168/358 (46%), Gaps = 11/358 (3%) Query: 4 NAKTIIAGMIALAI-SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 + +IIAG + TA ++IK+ ++ ++G + +G+ N AI++ + + Sbjct: 16 FSLSIIAGCGGGGTPAPTAPVEEIKIGLIAPLTGDVKTFGESVKNAFELAIEE--SGHKV 73 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 + V DD +AV VA+K++ D + ++G + SS T P S++ + G+++IS Sbjct: 74 GDFNIKYVIADDRNVATEAVNVADKLITQDKVSAIVGSVTSSCTIPISEVAQAAGVVVIS 133 Query: 122 PGATNPELTQRG---YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGL 177 P ATNP++T G +I R +D QG AA++ L+ + + A++ D+ Y GL Sbjct: 134 PTATNPKVTVDGGKRKDYIFRACFIDPFQGTVAARFALDELGAKTAAVLFDQGNDYTIGL 193 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 ++ A VV + + DFSA++ R+ + D ++ YY ++ + +QAR Sbjct: 194 KDYFKEAFVAGGGQVVAEEAYAKTDTDFSAVLTRIAQLKPDVLFLPDYYQKVSLIGKQAR 253 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSG 297 G+ F+G +G + + A D G D P + VD A Sbjct: 254 DKGITATFLGGDGWDSPEIDWTAMDG--GYFTNHYSPEDPRPEVKEWVDKYTAKYGQTPD 311 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDF 354 + Y A + L A+E+ GS +P A+ + + G V G +++DE G+ Sbjct: 312 ALATLAYDATKLLLAAIEKAGSKDPAAIRDAMASIEGFQAVSGSISFDENGNPIKSAV 369 >UniRef50_A6TPW6 Extracellular ligand-binding receptor n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TPW6_ALKMQ Length = 402 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 87/357 (24%), Positives = 156/357 (43%), Gaps = 9/357 (2%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 T ++ IK+ +G+++G A WG EFN + +++ N KGG G + + YD D Sbjct: 43 TDTSEVIKIGWMGSLTGDQAVWGTCEFNTVKMMVEEANRKGGWLGQTIEVIGYDTRGDAM 102 Query: 80 QAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT----QRGY 134 +AV ++ D + VIG S S + E+ + I+ ATNP++T Sbjct: 103 EAVNAVRRLTSQDKVVAVIGPNASGQAIAISSVLEEMKVADIATVATNPKVTIDESGNVK 162 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVV 193 + R +D QG AA Y L+ + + AI++D Y +GL + +V Sbjct: 163 PYNFRVCFIDPYQGAVAAGYALDVLGLTKAAILYDVADDYSQGLTEFFEKHFVENGGTIV 222 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 +G G+ DF ++++K+ + V+ ++ E+ QAR +G+ +G +G + Sbjct: 223 AKEGFKFGDVDFRPQLSKIKQAEPEVVFMPYFFKEVALSANQARELGIDAVLLGGDGWPS 282 Query: 254 ASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 L +A +A EG +D DP Q A A P ++ Y A L +A Sbjct: 283 DVLLEMAAEAVEGSYFVNHLDFD-DPDVQDFKAAYTAKYNLPVELNGYLAYDAFTVLESA 341 Query: 314 LERTGSDEPLALVKDLKANGANTVIGPLNWD-EKGDLKGFDFGVFQWHADGSSTAAK 369 +E+ G + A+ L+ + G + E + +G D + + +G + Sbjct: 342 VEKAGVADSEAIRDALETVSVKGITGQITISKETHNPEGKDAAIIKIQ-NGQYVFQQ 397 >UniRef50_A1TSM1 Extracellular ligand-binding receptor n=2 Tax=Acidovorax RepID=A1TSM1_ACIAC Length = 379 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 100/370 (27%), Positives = 175/370 (47%), Gaps = 11/370 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMA----DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M + +AL ++ A + +++ + ++GP A G +GA AIK++ Sbjct: 1 MSKTQTIFRLTAMALGLACAAAHAQAQERVRIGFMSPVTGPQAANGGDNRDGALLAIKEL 60 Query: 57 NAKG-GIKGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYE 113 NAKG + G + DD DPKQ V VA + + I++V+G S T PA+ + Sbjct: 61 NAKGVKVAGKPVVFELDINDDVADPKQGVQVAQTLADKKIRFVLGPYNSGVTVPAARVLN 120 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 D IL ++ A+NP++T+ GY + R D+ G A Y + +K + +A+I D+ Y Sbjct: 121 DSDILTLT-VASNPKITELGYGTLFRIGASDNQLGTKMATYAAQDLKLKTVAVIDDRTAY 179 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+G+AR + VV + T DFSA++ ++ + V+YGGY P+ G +L Sbjct: 180 GQGVAREFTAQARRLGLQVVATEFTTDKATDFSAILTNIRGAKAEAVFYGGYSPQGGPLL 239 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAE-GMLVTMPKR-YDQDPANQGIVDALKAD 291 +Q R++G+ +G +G+ + +N+A + + T D+ Q + +A+ Sbjct: 240 KQMRALGITGPLLGGDGICSTETANLAQLTGDLNVYCTQGGSLLDKSDKGQKFAERYRAE 299 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGS-DEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 K Y Y + LA A+E T S + + + + V G ++D K DLK Sbjct: 300 YKRDPLTYAAAFYDGMYLLANAMESTQSTTDTKKIAQAIANGKYAGVTGEFSYDVKHDLK 359 Query: 351 GFDFGVFQWH 360 V+ + Sbjct: 360 LSAVTVYTFK 369 >UniRef50_C1TP01 Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP01_9BACT Length = 383 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 145/364 (39%), Gaps = 12/364 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M++ +A + ++ AMA+ +K+ + A++G A +G E N A+ A+ +INAK Sbjct: 1 MRKLFVLCMAVALCCTMAAGAMAEETVKIGYLAALTGDWAAYGQTEKNTAQLAVDEINAK 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G K+ V YD + AV +++ D + ++G S + + + Sbjct: 61 GGIDGRKVELVVYDFRGRQEDAVNAVRRLLEEDKVSAIVGANASGINIATAALVNRAEVP 120 Query: 119 MISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQY 173 I +TNP +T + + R D QG A + + + + A+++D Y Sbjct: 121 QIGTVSTNPMVTVDRKGKVRPYSFRICFTDPYQGKLIAWFAAKELGKTKAAVLYDIASDY 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGIT-AGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 +GL + V + A + DF A + ++++ D + EM + Sbjct: 181 AQGLREFFIKSFEEYGGETVADEAFKGAQDVDFRAQLTKIREAGADVLVLPNMGKEMALI 240 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADK 292 ++QAR +G+ + IAG + E DP + +A Sbjct: 241 MKQARELGMDDLVFVGGDGYAEFMWEIAGKSMENSYWINHVSPS-DPNMAKFFEDYEAKY 299 Query: 293 KDPSGPYV--WITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIGPLNWDEKGDL 349 D +V + Y A+ L A++R S + + + + L + DE + Sbjct: 300 NDECKEFVNGILGYDAMYWLFDAIDRADSTDSVKIAQALADTKDLQLHHATITMDEFHNP 359 Query: 350 KGFD 353 D Sbjct: 360 LNKD 363 >UniRef50_D2L0G3 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0G3_9DELT Length = 389 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 159/366 (43%), Gaps = 14/366 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M+ + G+ + A AD IK+AV +G A +G+ G I +INA Sbjct: 7 MRMSLFGAALGLTLGLSATGARADGTIKIAVPSPYTGSAAGYGENVKAGVAMKIDEINAA 66 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G KL V D+ C+P++A V++ I ND I ++GHLCSS+ A Y EG+ Sbjct: 67 GGVGGKKLEAVYLDEQCEPREAATVSSSIANDPDIVGIVGHLCSSAQLAALPTYVREGVP 126 Query: 119 MISPGATNPELTQRGYQ-----HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 ISP AT+ ++ + R D QG A Y+ + + +++AI ++ Y Sbjct: 127 AISPTATSVAISDKNKDEKGKVWAFRNVYRDDFQGKFLADYVDKVLGLKKVAIFYENNDY 186 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G GL + K +V + G++D++ + +LK ++ GYYPE + Sbjct: 187 GIGLKDAFVKEGKKLGLTIVGEEAYKKGDQDYTPQLTKLKSAAPQAMFIAGYYPEGALIA 246 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPA-NQGIVDALKADK 292 QA+ +GL G +G NA + G A + +T P + A + ++ KA Sbjct: 247 DQAKKIGLSVPKFGADGFDNADYMKLGGAAVDDTYLTAPFLAETAGADAKKFIEDFKAKY 306 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-----GANTVIGPLNWDEKG 347 K Y A LA A+ + G + + L G V G +D G Sbjct: 307 KREVDWMSANAYDATGMLAAAIAKAGP-DRAKIRDYLAGMDSPEKGYKGVTGVNYFDANG 365 Query: 348 DLKGFD 353 D + Sbjct: 366 DCQKPA 371 >UniRef50_A6T359 ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T359_JANMA Length = 376 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 101/375 (26%), Positives = 171/375 (45%), Gaps = 8/375 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMA-DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK ++ + + + A +K+ + ++GP A +G NGAR A+ ++N K Sbjct: 1 MKSSSFIFPILIASASTLVQAQEVQTVKIGLAAPLTGPQAFYGKDSQNGARLAVDELNEK 60 Query: 60 GGIKGDK---LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 + G K + DDA DPKQ AVA + + + VIGH S + PA+ IY G Sbjct: 61 KIVVGGKQLRFELLSEDDAADPKQGAAVAQRFCDLHVNAVIGHTNSGTAIPAARIYHQCG 120 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 + +SP AT+PELT+ Y R DS+ A Y + +K + IA++ D+ YG+G Sbjct: 121 LPNLSPSATSPELTKSAYNTTFRMLANDSTLAQALAAYTVNVLKLKTIAVVDDRSAYGQG 180 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + + L+ VV DFSA++ +K N D V++GG P+ MLRQ Sbjct: 181 LADAFRTALRNTPVQVVTQQYTNDKAVDFSAILTAIKGRNPDAVFFGGMDPQGSAMLRQM 240 Query: 237 RSVGL-KTQFMGPEGVGNASLSN-IAGDAAEGMLVTMPK--RYDQDPANQGIVDALKADK 292 +GL + +F+G +G+ + G + LV D+ A++ Sbjct: 241 EQLGLTRQKFIGGDGICTQGMEQRTEGMKIQDNLVCAHSGIALDRTTASRAWKKRYDEKF 300 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 + +Y AV ++A A++ S EP + + V+ + +D +G++K Sbjct: 301 PGQFQMHGPYSYDAVLAVAKAMQAANSVEPQKYLPAMGKVHFAGVMSNVQFDARGEIKNP 360 Query: 353 DFGVFQWHADGSSTA 367 ++ + A Sbjct: 361 TISIYTYQDGKRRLA 375 >UniRef50_Q12GM8 Extracellular ligand-binding receptor n=1 Tax=Polaromonas sp. JS666 RepID=Q12GM8_POLSJ Length = 376 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 157/354 (44%), Gaps = 9/354 (2%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 + ++ +ALA S A +KV V ++G A +G + A+K N GG+ Sbjct: 8 KLQACVMFAGVALAFSAGAQ---VKVGVFVPLTGDAAGYGQSALEAIQLAVKQKNDAGGV 64 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 G K+ V DD P+Q+V VA ++ +DG+ ++G + S ++ A+ + G I Sbjct: 65 LGQKIELVVRDDGAKPEQSVTVAKRLATSDGVLVMLGSISSPASFAATQVALQTGTPQIV 124 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETV-KPQRIAIIHDKQQYGEGLARS 180 T +T +G + R D+ ++I+ +++ ++ +G G + Sbjct: 125 LLGTAQRITTQGNPWVFRGTIPDTKLSGDLVEFIIRKYPGKKKVGYLYVNDDFGRGGFEA 184 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + +++ +V + G+ DF++ + +++ EN D Y E + QA+ G Sbjct: 185 FKARAESSGLTIVAEEKYAPGDLDFTSQLTKIQSENPDVFVDWSRYTEGALVAIQAKRKG 244 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQ---GIVDALKADKKDPSG 297 + G EG+ + + +AGDA++GM+ +P N + +K Sbjct: 245 MTLPHFGSEGLSHPNFIKLAGDASDGMMYPVPFSMTTQSGNNIAVTLAQDIKKTYNKEIE 304 Query: 298 PYVWITYAAVQSLATALERTG-SDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 + Y A++++ A+E++G + + L LK+ ++ G +D KGD Sbjct: 305 YTHALAYDAMRAVIFAIEKSGTTTDKLKFRDALKSLEFDSTRGKFKFDAKGDPT 358 >UniRef50_B7AA03 Extracellular ligand-binding receptor n=3 Tax=Thermaceae RepID=B7AA03_THEAQ Length = 389 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 13/379 (3%) Query: 2 KRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 R ++AG+ AL ++ A+ IK+A +SGP A G+ GA AI++ + Sbjct: 1 MRKVGFLVAGVAALGMA-LGQANVIKIASQSPLSGPQAALGEQIKLGAELAIEEAKPRFK 59 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G L V YDD +P VA AN+I+ND I V+GHL S P+S++Y ++M+ Sbjct: 60 ALGFDLQFVPYDDQANPDVGVANANRIINDPDILGVVGHLNSGVAIPSSEVYARVNLVMV 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SP TNP +T R ++ R G D QGP A+Y +K + + IIHDK YG+GLA Sbjct: 120 SPANTNPRVTDRKLPNVNRICGRDDVQGPVGAEYAFNNLKVKNVFIIHDKTAYGQGLAEE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKEN--IDFVYYGGYYPEMGQMLRQARS 238 + L+A V F G + +F +I +++ + +Y+GG Y ++G ++Q R Sbjct: 180 FKKRLEALGGKAVAFVGTEE-QSNFVPIINQIRGARPVPELIYFGGIYSQIGPFVKQLRE 238 Query: 239 VGLKTQFMGPEGVGNASLSNIAGD--AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPS 296 G+KT+ MG +G+ ++ L +AG AA T+ P + + K Sbjct: 239 RGVKTRLMGGDGLDSSELVRLAGKENAAGTFYTTVAGPVSAFPKAKAVAQKFKQKYGKEI 298 Query: 297 GPYVWITYAAVQSLAT----ALERTGSDEP--LALVKDLKANGANTVIGPLNWDEKGDLK 350 + Y A + A++ G +P + ++++ + G + +D+KGD K Sbjct: 299 EGFGIYAYDAANVILAALENAIKAAGGKKPTREQVSQEVRKVKMEGLTGTIEFDDKGDNK 358 Query: 351 GFDFGVFQWHADGSSTAAK 369 + V Q A G+ K Sbjct: 359 KAKYFVMQVAATGNWADNK 377 >UniRef50_A5IN43 Extracellular ligand-binding receptor n=9 Tax=Thermotogaceae RepID=A5IN43_THEP1 Length = 370 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 86/328 (26%), Positives = 155/328 (47%), Gaps = 10/328 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ V+ M+G I+ +G M + G + A ++ K + G+K+ + D + +A A Sbjct: 21 VKIGVILPMTGGISAFGRMVWEGIQIAYEE---KPTVLGEKVELLLLDTRSEKTEAANAA 77 Query: 86 NKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 ++ ++ + + +IG + S+ + + I E+ + MI+P +TNP +TQ G + + R +D Sbjct: 78 SRAIDKEKVLAIIGEVASAHSLAVAPIAEENKVPMITPASTNPLVTQ-GRKFVSRVCFID 136 Query: 145 SSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 QG A + + + +R+ + D +Q Y GL+ +D V +G++ Sbjct: 137 PFQGVAMAVFAYKNLGAKRVVVFTDVEQDYSVGLSNFFKDKFTELGGQ-VKRVFFRSGDQ 195 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 DFSA ++ N D +Y GYYPE+ + RQAR +G + +G L I G+A Sbjct: 196 DFSAQLSVAMSFNPDAIYITGYYPEIALISRQARQLGFTGYILAGDGADAPELIEIGGEA 255 Query: 264 AEGMLVTMPKRY--DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 EG+L T +P + V+ K + Y A L A+ER G + Sbjct: 256 VEGLLFTTHYHPKAASNPVAKKFVEVYKEKYGKEPAALSALGYDAYMVLLDAIERAGGFD 315 Query: 322 PLALVKDLKAN-GANTVIGPLNWDEKGD 348 + ++++ N G +N DE GD Sbjct: 316 TEKIAEEIRKTEDFNGASGIINIDENGD 343 >UniRef50_A4J594 Extracellular ligand-binding receptor n=2 Tax=Bacteria RepID=A4J594_DESRM Length = 396 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 86/355 (24%), Positives = 165/355 (46%), Gaps = 9/355 (2%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 ++ + IK+ +GA +G A +G G + A +DIN GG+ G K+ +E D Sbjct: 36 GSSNGESIKIGFLGAKNGNHAAFGIPTLEGMKMAAEDINKAGGLLGKKIEIIEEDHGSKN 95 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 + V K++ D + ++G ++ T+ A+ I +++ ++++S GA + + G +I Sbjct: 96 TEGANVTQKLITRDKVVAIVGDPTTAITKIAAPIAQEKKVVLLSAGAVGTGVVENG-DYI 154 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFD 196 R LD+ P KY+ E + +++A+I Y GL++ + L +V Sbjct: 155 FRDTLLDAVAAPAVTKYVKENLGWKKVAVITSMNNDYSVGLSKLFRAALVDNGIEIVAEQ 214 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 I G+++FSA + +K++N D + + GYY E G +++ R G+KT +G +G+ L Sbjct: 215 SIQDGDQNFSAQVTAIKEKNPDGIVFTGYYTEGGLFMKEVRKQGMKTVMVGGDGLLGDVL 274 Query: 257 SNIAGDAAEGMLVTMPKRYDQD---PANQGIVDALKA-DKKDPSGPYVWITYAAVQSLAT 312 + G+A EG ++ D++ + ++A K + + Y AV +A Sbjct: 275 MKMGGEAVEGSMIYCGFAADENKAGEKTKKFIEAYKTGNNGTLPDMFAAQGYDAVMLIAD 334 Query: 313 ALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 A++ SD P +L K V G + + E + + + G T Sbjct: 335 AIKAANSDVPEKFRAELAKTKDWTGVSGIITFQENREPIKSPVYLLEVKG-GKFT 388 >UniRef50_Q67LV0 Branched chain amino acid ABC transporter substrate-binding protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67LV0_SYMTH Length = 395 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 92/356 (25%), Positives = 160/356 (44%), Gaps = 6/356 (1%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 +A T +G A S ++ + V+G ++G A++G + G A+++INA GG++ Sbjct: 28 SAATAPSGAQGSAGSQNGAQGEVLIGVMGPLTGDSAEYGKIWRRGFDLALEEINAAGGVQ 87 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G L V D DPKQ+ AVA K VND + VIG S ++ AS I++ G++ + Sbjct: 88 GRPLNYVFEDTQSDPKQSPAVAQKFVNDPRVVAVIGDFSSPASMAASPIFQRAGLVQLGI 147 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 ++P+ T+ G I + + + P A+ +E + +R+A++H +G+ A Sbjct: 148 TNSHPDFTKTG-DFIWSNSTSQTDEAPFLARLAVEQLGRKRLAVLHQNTDWGKTTADLFV 206 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 + +A A VV + EKDF ++ + + D + YY + + +Q +VGL Sbjct: 207 EQARALGAEVVLQEAYLLTEKDFRPVLTKARDAQPDALVLISYYNDGALIAQQIPAVGLD 266 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGPYVW 301 + V + N+ G A EG+ D P Q V+ + + Sbjct: 267 VTVLAASSVYSPQFLNLGGAAVEGVYTVSRFHPADPRPEAQQFVERFRERYGTDPDTFAA 326 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVI-GPLNWDEKGDLKGFDFG 355 Y ++ LA L R G + AL L+ A T++ G + E L+ F Sbjct: 327 GAYDGMKILAAVLNRVG-VDRKALRDGLEQAEHLETILQGATAFGEDRRLRNPRFV 381 >UniRef50_C9R8F6 Extracellular ligand-binding receptor n=1 Tax=Ammonifex degensii KC4 RepID=C9R8F6_AMMDK Length = 397 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 105/353 (29%), Positives = 171/353 (48%), Gaps = 11/353 (3%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A A ++K+ + +MSG + G + R A+ +INA+GGI G K+ DDA DP Sbjct: 36 APAGEVKLGCILSMSGQLGPMGKKMADAVRLAVDEINAQGGINGKKIKLYLEDDATDPVT 95 Query: 81 AVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY-QHIM 138 A+ A K+V +G+K +IG + SS+ + + ++MISP AT PELT + + +++ Sbjct: 96 ALNAAKKLVEVNGVKLLIGGMSSSAAKTMGPFLAERKVIMISPSATAPELTGQPWRKYLF 155 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 RT D QG A+ L+ +++ I+ YG GL ++ L+ A V+ F Sbjct: 156 RTCPSDIYQGKLMAQIALDQ-GAKKVVILAMDNTYGIGLGEEIKKALEGK-AQVLAFIKY 213 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL-KTQFMGPEGVGNASLS 257 +KD+ + + ++K N D V + GY + + +QA ++GL K +++G +GV + + Sbjct: 214 DPKKKDYRSELTQIKALNPDAVAHVGYNEDGRIIYQQALNLGLDKMKWIGCDGVYGSGMF 273 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQG---IVDALKADKKDPSGPYVWITYAAVQSLATAL 314 AAE M TM P NQ A KA + Y AV LA A Sbjct: 274 ENP-AAAEFMAKTMSGTRPASPENQAYEKFRQAYKAKFNTEPEVFCDTIYDAVNLLAKAC 332 Query: 315 ERTGSDEPLALVKDLKANG--ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 + GSD+ + + L G V G + +D+ GD G F +++ G Sbjct: 333 AQAGSDDADKIREALLKIGQNYPGVSGSITFDQGGDRVGGYFEIWKVVKKGDK 385 >UniRef50_A0LKN6 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKN6_SYNFM Length = 376 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 86/367 (23%), Positives = 158/367 (43%), Gaps = 9/367 (2%) Query: 1 MKRNAKTIIAGMIA--LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M+R + ++A L+ A+ I V + ++SG A A++++N Sbjct: 1 MRRFGSLCVMILLAIVLSACPGLAAESITVGAIFSLSGIAATHNGPLIPMLELAVEEVNE 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG++G + V D+ P +V A + V G+ VIG SS + + + + GI Sbjct: 61 GGGLQGRPVKLVFLDNQSTPIGSVKAAEEAVRLGMTAVIGAHWSSHSLAMAPVLQKAGIP 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII-HDKQQYGEGL 177 MISPG+T+P +T+ G +I R +DS QG A++ + + +R+A+ + + Y L Sbjct: 121 MISPGSTHPMVTRVG-DYIFRICFVDSFQGRAMARFAFKELGARRVAVAKNIDEDYSAML 179 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 A + + V DFS ++ ++++ D VY GY + G ++RQ Sbjct: 180 ADCFSESFQLYGGKVACEVQYRGKAVDFSDIMEQIRRARPDVVYVPGYTRDSGLLIRQGV 239 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPS 296 S+G++ F+G + S+ AGDA EG + P + + + Sbjct: 240 SMGIRATFLGGDAWDEISIY--AGDAVEGSYQSAPWHPSVPRAESLRLKELYFRKYGAEI 297 Query: 297 GPYVW-ITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDF 354 + + Y AV L A+ R G+ + + L G +++ GD + Sbjct: 298 KSFSAPLAYDAVMLLVDAIRRAGTSDRARIRDCLAGTLDFRGATGLISYHGGGDPIDKEI 357 Query: 355 GVFQWHA 361 + +W Sbjct: 358 VMLKWEK 364 >UniRef50_A1WEQ0 Extracellular ligand-binding receptor n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEQ0_VEREI Length = 382 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 83/340 (24%), Positives = 155/340 (45%), Gaps = 10/340 (2%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S D ++ V+ ++GP A G G R A ++ NA+GG+KG K+ E DD Sbjct: 21 SSALAQDTVRFGVLLPLTGPAALSGTSIVEGMRLAAEEANAQGGVKGKKVQLFEEDDEGL 80 Query: 78 PKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ---RG 133 +AV A ++V ++ + + G S++ A+ + + + ++S G+T+ T G Sbjct: 81 TTKAVTGARRLVESNKVIGISGSYISAAAIAATKVAREFKVPVVSGGSTSVSATDANTPG 140 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 R QG +A+ I++ +K +++A+I++ YG LA ++ + VV Sbjct: 141 DPWFFRAFPGSIEQGEQSARDIVQKLKAKKVAVIYENSPYGMSLAEQMRKDIPRFGGQVV 200 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 + E+DF +++ +++ + +Y G Q++RQA VGLKTQ +G + + Sbjct: 201 AEEIYNTDERDFYSVLTKVRARQPEAIYLAGLMDAGVQVIRQASEVGLKTQLVGSGSMMS 260 Query: 254 ASLSNIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 L + G A+EG V +M + + Q + K + + Y ++ L Sbjct: 261 DKLIQLTGHASEGFAVSSMFEPSTPNEFGQKFTRMFRERYKKEPDVFTALGYDSMHLLIE 320 Query: 313 ALERTGSDEPLALVKDL-KANGANTVIGP----LNWDEKG 347 A R + + +L K + V GP + +D KG Sbjct: 321 AARRAAKLDGEQVRAELIKMSDVPLVQGPANTMVKFDAKG 360 >UniRef50_B8GBD0 Extracellular ligand-binding receptor n=5 Tax=Chloroflexaceae RepID=B8GBD0_CHLAD Length = 814 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 163/345 (47%), Gaps = 9/345 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 IK+A G +SG A G N AI++IN++ G K V +DD P+ A Sbjct: 453 TIKIATQGPLSGGQAALGTGMKNAVELAIEEINSQLSALGVKFEVVPFDDQAKPEVGSAN 512 Query: 85 ANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A IV+D I V+GHL S A Y++ + M+SP TNP +T+ GY+ R G Sbjct: 513 AKNIVSDADILCVVGHLNSGVALAALPDYKNARLAMVSPANTNPNITEGGYEVAFRVVGR 572 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 D QG A K+ E +K + + IIHD YG+G+A + +A V+ F+G Sbjct: 573 DDVQGSVAEKFAREELKIKSVYIIHDTTAYGQGVAEFFRKAAEANGIQVLGFEGTEEK-S 631 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 DFSA++ + N D +++GG Y + G RQAR G+ QFMGP+G+ + L+ +AGDA Sbjct: 632 DFSAILTPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGLDSEELAKLAGDA 691 Query: 264 AEGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQ-----SLATALERT 317 + M T Q P +A + + P+ Y A L+ A+ Sbjct: 692 VDKMYYTSVAAPVSQFPKAAKYAADYQAAYGEGAPPFSAQAYDAANICAAGILSAAITAG 751 Query: 318 GSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 G +++ ++ + G ++ KGD + V Q +A Sbjct: 752 GKPTRAQVLEAIRNLPPFPGITGTFKFNAKGDPTVATYFVLQVNA 796 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 105/344 (30%), Positives = 159/344 (46%), Gaps = 9/344 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+A G +SG A G N A A+K ++ G ++ +DD P+ A A Sbjct: 60 IKIATQGPLSGGQAALGTGMKNAAELAVKQLSGPLAELGFRVELAPFDDQAKPEVGSANA 119 Query: 86 NKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 IV+D I V+GHL S A Y++ + M+SP TNP +T+ GY+ R G D Sbjct: 120 KNIVSDADILCVVGHLNSGVALAALPDYKNARLAMVSPANTNPNITEGGYEVAFRVVGRD 179 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QG A K+ E +K + + IIHD YG+G+A + +A V+ F+G D Sbjct: 180 DVQGSVAEKFAREELKIKSVYIIHDTTAYGQGVAEFFRKAAEANGIQVLGFEGTEEK-SD 238 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 FSA++ + N D +++GG Y + G RQAR G+ QFMGP+G+ + L+ +AGDA Sbjct: 239 FSAILTPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGLDSEELAKLAGDAV 298 Query: 265 EGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQS-----LATALERTG 318 + M T Q P KA + + P+ Y A A G Sbjct: 299 DKMYYTSVAAPVSQFPDAAKYAADYKAAYGEDAPPFSAQAYDATGICLTAIANAAKAAGG 358 Query: 319 SDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 ++ ++K + G ++EKGD + V Q +A Sbjct: 359 KPTREQVLNEIKKLSAYKGITGTYTFNEKGDPTVATYFVLQVNA 402 >UniRef50_A5CZP1 ABC-type branched-chain amino acid transport systems, periplasmic component n=2 Tax=Pelotomaculum thermopropionicum SI RepID=A5CZP1_PELTS Length = 388 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 94/389 (24%), Positives = 162/389 (41%), Gaps = 23/389 (5%) Query: 1 MKRNAKTIIAGMIALAISHTA---------------MADDIKVAVVGAMSGPIAQWGDME 45 + + T ++ ++LA+ TA A +IK+ VV +SG A +G Sbjct: 3 LNKRILTFLSICLSLALLVTAGCSSPSGPGGGAPNDAAGEIKIGVVATLSGDGADYGVSI 62 Query: 46 FNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSS 104 G A IN GGI G K+ V D D +A+ K++N D + +IG S Sbjct: 63 KRGLETARDRINGAGGINGRKISLVIEDSHGDKNEAINAVQKLINRDRVLAIIGPTNSGE 122 Query: 105 TQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRI 164 A + + G++++ T + + G ++ R + + + P + E + R+ Sbjct: 123 MFAAGPVADKAGVVIMGTSNTARGIGEIG-PYVFRNSLPEDNIIPITVRKSKEKLGFNRV 181 Query: 165 AIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYG 223 A+++ + A++ ++ L+ +V G+ +F A + R+ + + Sbjct: 182 ALLYSSNNDWAVSSAKTFEEALREQGVAIVETQTFADGDTNFQAQLTRVAAAKPEALAVS 241 Query: 224 GYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ-DPANQ 282 Y E +L QAR G+ MG G + L IAG+AAEG LV P + DPA + Sbjct: 242 ALYKEAALLLIQARQQGINLPVMGGNGFNDPELIKIAGEAAEGALVGSPWYAGKDDPAVR 301 Query: 283 GIVDALKADKKDPSGPYVWITYAAVQSLATALERTG-SDEPLALVKDLKAN-GANTVIGP 340 V+ K + +Y A+ +A AL+ G + + L A V G Sbjct: 302 DFVEEYKKRYHTVPNQFAAQSYDALGIMAEALKTEGAAADRARFRDALAAIKDYRGVTGR 361 Query: 341 LNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 ++DE G+ D V Q A G+ K Sbjct: 362 FSFDENGNPL-MDAVVLQI-AGGTYREVK 388 >UniRef50_Q9AQ31 40kDa leucine-binding transmembrane protein n=3 Tax=Bradyrhizobium RepID=Q9AQ31_BRASW Length = 384 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 136/340 (40%), Positives = 196/340 (57%), Gaps = 2/340 (0%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A D+ +AV G M+G A G +GA A+ INA G + KL+ DDACDPKQAV Sbjct: 39 AKDVYIAVAGPMTGSTAALGAQIRDGAAAAVDSINASGLLPDTKLILRIADDACDPKQAV 98 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 AVAN++ DGIK V+GH CSSS+ PASDIY + ++ ISPG+TNP LT+RG + R G Sbjct: 99 AVANRLTTDGIKLVVGHFCSSSSIPASDIYAEAEVIQISPGSTNPRLTERGLTTLFRICG 158 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D QG AA YI+ + ++A++ DK G+G+A V+ L+AA + V AGE Sbjct: 159 RDDQQGGVAADYIVRHHQGAKLAVLDDKSTAGKGIADIVESRLRAAGEHTV-RQSYVAGE 217 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 KD++AL++RLK++ I VY GGYY E+G ++RQA + + + + + IAGD Sbjct: 218 KDYTALVSRLKRDGIQIVYIGGYYNEIGLIVRQAVEASARLTVIANDPLMTSDFVAIAGD 277 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 AA G L T ++ A V LK +G Y YAAVQ+ A +++R G+ + Sbjct: 278 AANGTLFTFMPDPTKNAAGAAAVARLKGSSLSAAG-YTLYAYAAVQAWADSVKRAGTFDG 336 Query: 323 LALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 + + L++ T IG + +D KGD F V++W + Sbjct: 337 IRVAAALRSGSIQTAIGTVRFDSKGDNAAPGFVVYRWRDN 376 >UniRef50_D1B6L8 Extracellular ligand-binding receptor n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6L8_THEAS Length = 386 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 83/355 (23%), Positives = 159/355 (44%), Gaps = 10/355 (2%) Query: 1 MKRNAKTIIAGMIALA-ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M+ A A ++ +A +S A++IK+ +++G + WG E +K INA+ Sbjct: 1 MRFFAWLGGAMLLVMALVSGAPAAEEIKIGHSVSLTGGASMWGQSEKLALDLLVKRINAQ 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GG+ G K+ + YD+ DP ++V VA ++++D + +IG S + + + E I M Sbjct: 61 GGVLGRKIRLISYDNRNDPVESVNVARRLIDDRVVAIIGPAQSGNAIATAPVVERARIPM 120 Query: 120 ISPGATNPEL-----TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQY 173 + ATNP + T + + R +D QG AA++ +K + AI++D Y Sbjct: 121 VVTTATNPYVTIDKRTGKTRAFVFRPCFIDPFQGTVAARFAYRDLKARTAAILYDVGSDY 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+ LAR ++ VV + E D+ A + +++ D ++ E Sbjct: 181 GQWLARYFEEAFAKEGGKVVAKEAFRTDELDYRAQMGKIRSVKPDVIFIPTSQKEAAMAA 240 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKK 293 +QAR +G+++ +G + G+ + ++ G+A G DP +G V + Sbjct: 241 KQARDMGIRSTLLGTDNWGSPDIIDLGGNAVHGSYFVNLTDLS-DPDIKGFVAEYRRAYG 299 Query: 294 -DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEK 346 DP P + A+ + A++ + + + + ++ G L D K Sbjct: 300 ADPVLPNPVMAQDALLLIVNAIKVSKGTDGERMARAMENTRNLKVTSGTLTIDPK 354 >UniRef50_A9AXZ7 Extracellular ligand-binding receptor n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXZ7_HERA2 Length = 383 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 94/365 (25%), Positives = 158/365 (43%), Gaps = 10/365 (2%) Query: 1 MKRNAKTIIAGMIALAI------SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIK 54 M R + +I LA+ + A+ IK+ G MSG A G A+ AI Sbjct: 1 MLRRTALGMLVIIGLALVSACGGASQPQAETIKIGFFGPMSGNSASDGTHSMYAAKLAID 60 Query: 55 DINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYE 113 NA + G + YDD DP QA+ VA K+V D ++ VIG SS+T+ A+ +++ Sbjct: 61 QANANQTVPGKTFELITYDDQLDPNQAITVAQKLVTEDKVRAVIGGSYSSTTRAAAPVFQ 120 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 GI M++ AT+PE+T+ G I R + + QG A Y + + +++ Y Sbjct: 121 QAGIPMLAAYATHPEVTKTGSM-IFRVIYITTVQGNALAVYATTKLNYRNFHVLNINNDY 179 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G + + +A ++ +V + DFS+ IA +K + D + GYY + ++ Sbjct: 180 GRSITEAFTKTAQANHSTIVSASEYASDATDFSSQIATIKAKPADALILVGYYAQSADII 239 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGML-VTMPKRYDQDPANQGIVDALKADK 292 +Q R G+ +G +G+ + SL + G EG++ T R D Q + + Sbjct: 240 KQVRQAGITLPIIGSDGLDSPSLVELGGSDVEGVILATDFSRNDPRSIVQNFIREYRNAH 299 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKG 351 TY A L A +R+ A+ L A V G + + + ++ Sbjct: 300 GIDPDVVASSTYDATNLLIDAFKRSPDSSSSAIRDTLAATQTYEGVTGAIVFTPEREVNK 359 Query: 352 FDFGV 356 V Sbjct: 360 TVLFV 364 >UniRef50_A4JTH7 Extracellular ligand-binding receptor n=3 Tax=Burkholderia RepID=A4JTH7_BURVG Length = 378 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 106/366 (28%), Positives = 178/366 (48%), Gaps = 7/366 (1%) Query: 1 MKRNAKTIIAGMIALAISH-TAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M+ + + LA+ A AD +K+ V ++G ++ G + NG R AI+D+N+ Sbjct: 1 MQISRLLRGFSFLTLAMQPLAARADLTVKIGQVSPLTGELSHIGKDDENGVRLAIEDLNS 60 Query: 59 KGGIKGDK---LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDE 115 K G + V DDA DP+ AV VA K+V+D + V+GH S ++ PAS IY D Sbjct: 61 KKLRIGGQSVTFVLDSQDDAADPRTAVTVAQKLVDDHVAGVVGHANSGTSIPASKIYSDA 120 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 GI MI+ ATNP LT++G++++ R D QG Y++ +K +++AI+ D+ YG+ Sbjct: 121 GIPMITESATNPLLTEQGFRNVFRMVANDVRQGSVIGTYLVHDLKARKVAIVDDRTAYGQ 180 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GLA + +KAA VV + T D+ A++ +K D + + G + ++Q Sbjct: 181 GLADQIDKAVKAAGGTVVAREYGTDKTTDWKAVLTTIKSRQPDAIAFTGGDTQAAAFVQQ 240 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEG-MLVTMPKRYDQD-PANQGIVDALKADKK 293 + +GL F+ + ++AG + T+ D P + Sbjct: 241 MQRLGLTATFIAGDESCTPQFISLAGSSMNNKTYCTLAGVPPADMPQGPAFFKRFQQRFG 300 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFD 353 Y Y AV ++A A++ S +P + L+A + V G + +DEKGD++ Sbjct: 301 AEVQLYAPYAYDAVMAMAAAMQSADSTDPKIYLPKLQAVSVDGVTGSIRFDEKGDIRNGA 360 Query: 354 FGVFQW 359 V Q+ Sbjct: 361 ITVRQY 366 >UniRef50_Q3JSD7 Outative extracellular ligand binding protein n=35 Tax=pseudomallei group RepID=Q3JSD7_BURP1 Length = 405 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 102/358 (28%), Positives = 170/358 (47%), Gaps = 5/358 (1%) Query: 8 IIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDK 66 ++ + A+A A + +++ V ++GP+A G NGA+ A+ ++N I G Sbjct: 41 CLSLLAAVAFDAHAQSSVVRIGVAMPLTGPVAHLGKDVQNGAQLAVDELNRAPPTIDGKP 100 Query: 67 L--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 + V V DD DP+QAV VA ++V+ + V+G L S T A+ +Y GI I+P A Sbjct: 101 VKFVLVVEDDQGDPRQAVQVAQRLVDARVAGVVGDLNSGPTIVAAKVYAAAGIAQIAPAA 160 Query: 125 TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDG 184 T+P TQ GY+ R D+ QG + A + K + IA+I D+ YG+GL + Sbjct: 161 THPAYTQLGYKTAFRLMATDNQQGASLAGLAAKLAKGRPIALIDDRGAYGQGLIDQTEKT 220 Query: 185 LKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ 244 L+A+ + D T +F++++ R+K + + YGG + G M+RQ +++G+ Sbjct: 221 LRASGVTRIIRDYTTDTAVNFASILTRVKGAHAAVIVYGGADAQAGPMVRQMKALGIDAA 280 Query: 245 FMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWIT 303 F+G +GV + ++ A EG T + +A + Sbjct: 281 FVGSDGVCTGQWTALSSGANEGQFCTQAGDPRARMAGYAAFERRFEARYGKVI-VFAPYG 339 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 Y AV LA A+ R S EP AL+ L + VIG + + +GD V++ Sbjct: 340 YDAVMLLADAMRRANSTEPAALLGALATTRYDGVIGRIRFSPQGDNLNGAVTVYRVQR 397 >UniRef50_D2AV85 ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AV85_STRRD Length = 389 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 167/351 (47%), Gaps = 5/351 (1%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 D I + ++ SG A G N A+ A+ +INAKGG+ G KL DDACD Sbjct: 35 AATADDPIVLGMLIPQSGSEAAIGPYMSNAAQLALDEINAKGGVLGRKLELKTADDACDA 94 Query: 79 KQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 + A A ANK+V +G+ +G CS +T P I+ I MI P A + EL + +H+ Sbjct: 95 QSAAAGANKLVTEGVDISVGGYCSGATLPTLPIFGKANIPMIIPAANSQELVDQKLKHVF 154 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKA-ANANVVFFDG 197 G S Q A K+I + + + ++HD Y + +A + L A A A V + Sbjct: 155 LINGTGSQQAGAAEKWIAKQ-DAKSVVLMHDNTSYSKDIALRTKALLDAPAGAEAVLVET 213 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 +T E D+SA I + + DFVY+ GY+ E G + RQ R G K M +G + L Sbjct: 214 VTPKESDYSANITNVLAKKPDFVYWTGYFQEGGLIARQLRQAGYKGSIMVGDGSVSPKLV 273 Query: 258 NIAG-DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 IAG +AAEG+ TM + D +G + A K GPY Y AV+ A A+ + Sbjct: 274 EIAGAEAAEGLYATMTQTPDTLEGAEGWIAAYKKKYNADPGPYSNQAYDAVRLAAEAVTK 333 Query: 317 TGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 G + ++ L+A G + GPL + + L F + DG T Sbjct: 334 AGGTDGAKVISALEAIDGFSMFSGPLKFTPEHTLSNGGFQILVVK-DGKIT 383 >UniRef50_A9BM94 Extracellular ligand-binding receptor n=15 Tax=Comamonadaceae RepID=A9BM94_DELAS Length = 422 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 7/341 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDKLVGVEY--DDACDPKQAV 82 +++A G +SGPIA G E NG R A+ D+NAKG I G KL DD DP QAV Sbjct: 73 VRIAHAGPVSGPIASLGKDEENGVRMALDDLNAKGLEIGGRKLRWKLEAGDDGGDPGQAV 132 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 A+A ++ + + V+GHL S +T PA+ IY D GI+M++P A+NP +TQ GY R Sbjct: 133 ALARRLCDKKVAAVVGHLQSGTTLPATSIYHDCGIVMVTPAASNPAITQAGYDTTYRVIA 192 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D + + + + +R AII D+ YG+G+ + + +V Sbjct: 193 DDRAMVDALVAHAVGKLGVKRAAIIDDRSAYGQGIVALFEAEAREQGIEIVDKQFTGDKA 252 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL-KTQFMGPEGVGNASLSNIAG 261 DF ++ +K + D +++GG + G MLRQ + + K + +G +G+ L +AG Sbjct: 253 TDFVPILTAIKGKKPDAIFFGGLDAQAGPMLRQMAQLAMDKVRLLGGDGLCTLRLPELAG 312 Query: 262 DAA---EGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 + + ++ P D + Y A LA A+ R Sbjct: 313 NTSPLRNVTCAVGGSPLERMPGGAAWKQRYDQRFPDQYQVFSPYAYDATMVLAQAMLRAD 372 Query: 319 SDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 S P A + L+ + V P+ + +G+L+ ++ + Sbjct: 373 SIRPDAYIPYLRQTRHDGVTAPIAFTPQGELQAPVVTLYHY 413 >UniRef50_B9Y8T3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8T3_9FIRM Length = 407 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 94/387 (24%), Positives = 166/387 (42%), Gaps = 33/387 (8%) Query: 1 MKRNAKTIIAGMIALAISHTA--------------------MADDIKVAVVGAMSGPIAQ 40 MK+ A M+A++++ A +K+ + ++G +A Sbjct: 5 MKKVFMGAAALMMAVSMAGCGNSGSGNSGTATPEAGGSGTDAAGAVKIGLHYELTGGVAD 64 Query: 41 WGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHL 100 +G E NG+ AIK NA G +K V+YD+ D +AV +A ++ +DG+ V+G Sbjct: 65 YGKAELNGSLLAIKQANAAAGS--EKYGYVKYDNKSDSTEAVTLAAQLASDGVAGVVGPA 122 Query: 101 CSSSTQPASDIYEDEGILMISPGATNPELT--------QRGYQHIMRTAGLDSSQGPTAA 152 S ++ + I D + ++SP AT +T Y ++ R DS QG A Sbjct: 123 TSGASAASYQILNDAKVPVLSPSATQNNVTLTNPDDASSAAYDYVYRVCFEDSYQGAAMA 182 Query: 153 KYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIAR 211 +Y +T+ + I D Y +GL+ + + +V + + + DFS+++ + Sbjct: 183 QYAYDTLGKTKAVIYGDSTTDYAKGLSEAFEKQFTKLGGTIVGKENYVSKDTDFSSVLTK 242 Query: 212 LKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA--AEGMLV 269 +K + D +Y GYY E G +++QAR +GL G +G + +L ++ G A + Sbjct: 243 IKGMDFDVLYIPGYYNEAGLIIKQAREMGLDQTITGSDGFDSTTLVDLGGAANLNDVYFT 302 Query: 270 TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL 329 T Q +DA KA+ + + + Y A L A+E GS + A+ L Sbjct: 303 TAYTTVGASDKLQAFIDAYKAEYNEEPNMFSALAYDATNVLIQAIEEAGSSDGPAVQAAL 362 Query: 330 KANGANTVIGPLNWDEKGDLKGFDFGV 356 + V G +D V Sbjct: 363 TKISFDGVTGAFTFDATHTPIKPVLVV 389 >UniRef50_C8SVY2 Extracellular ligand-binding receptor n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SVY2_9RHIZ Length = 373 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 98/356 (27%), Positives = 170/356 (47%), Gaps = 3/356 (0%) Query: 1 MKRNAKTII--AGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 KR AK + + LA++ A A DIK+ +V M+G +A G N + AI +NA Sbjct: 5 FKRLAKRLACATALAGLAMTTMAAAADIKIGIVAPMTGQLASEGQDMENAVKMAIDAVNA 64 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 +GG+ GDK++ DDACDP+QAV +K+V++G+ ++G CS + P IY D GI Sbjct: 65 QGGVNGDKIITTTADDACDPQQAVTAGSKLVSEGVTAIVGGYCSGAVLPTLKIYGDAGIP 124 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 + GA + +L + Q TA + + + ++IA++ + Y L Sbjct: 125 FVIIGANSTKLVAANQGNAFLANSTGDMQATTAVE-LFKKNGYKKIAVVDEGDAYSSDLG 183 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + + K A + + TAGE+D+SA++ ++K D V++ Y+ + +Q R Sbjct: 184 KLTAEAFKGAGGEIAAKETTTAGEQDYSAVVTKIKSSGADAVFWTAYHAGGALLTKQLRQ 243 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP 298 G + + +G + IAG A EG+ + P D K +G Sbjct: 244 AGFQGGIVLGDGNNSPEYLEIAGSAGEGVYLLSPPTVDLLSGAADFKAKYKETYGRDAGA 303 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 Y ++Y +A A+ R S + A+++ LKA+ + G + + +K L+ +F Sbjct: 304 YAALSYDVGDLIADAITRAKSADQKAIIEALKASDFKGLAGEIKFTDKNTLQTSNF 359 >UniRef50_A9IHL6 Putative binding-protein-dependent transport protein n=4 Tax=Bordetella RepID=A9IHL6_BORPD Length = 382 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 10/361 (2%) Query: 2 KRNAKTIIAGMIALA-------ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIK 54 + A IA + LA + +++ ++ +++G A +GD G R AI Sbjct: 7 RTLAVASIAAAVTLAGCGQKEEAAAATGGTPLRLGIIESITGAAASYGDAHNKGTRLAID 66 Query: 55 DINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYE 113 +IN GG+ G + DD DP + A K++ + ++G S T S E Sbjct: 67 EINKAGGVNGLPIEVHAEDDKSDPATGINAAKKLITQRKVDAIVGSDASLVTIAFSKENE 126 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 + +++ A +P +T++G+++ R D+ A +Y ++ K +IA + + Y Sbjct: 127 KYKVPLVNGMAGSPTITEQGFKYTWRIKITDNQLDTKAIEYYIQDKKAHKIAFLAENSDY 186 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+ ++ D + A VV ++ GE DF A + ++ + D ++ GYY E + Sbjct: 187 GKPPTKAAADRARELGAEVVAYEEYNRGETDFKAQLTNIRDQAPDVLFVHGYYTEGSIIA 246 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADK 292 RQ R +G+KTQ + EG G A +AGDAAEG + D ++ A +A Sbjct: 247 RQIRELGIKTQLIVNEGQGVAKFQELAGDAAEGAVFPTTWLPGLSDERSKQFETAYRARY 306 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGDLKG 351 G + +Y AV ++ A + G + L G +T++GP+++D+K G Sbjct: 307 NTEPGAFAAGSYEAVYTVVEAARKGGGTSAEQIQAGLAQLQGFDTLLGPVHFDQKNQNDG 366 Query: 352 F 352 Sbjct: 367 A 367 >UniRef50_C9ACC1 Branched-chain amino acid transporter n=3 Tax=Enterococcus casseliflavus RepID=C9ACC1_ENTCA Length = 388 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 12/342 (3%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ +SG +A +G E G A+++INA GG+ G ++ + D+ D +A Sbjct: 35 DTIKIGANLELSGAVAAYGTAEKEGIDLAVEEINAAGGVLGKQIEIISKDNKSDNNEAAT 94 Query: 84 VANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT---QRGYQHIMR 139 VA + ND + +IG S +T+ A + M++P T+ +T + + R Sbjct: 95 VAANLATNDKVVAIIGPATSGATKAALPNVTRAQVPMVTPSGTDDAITYTSGKVQEFAFR 154 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDGI 198 + DS QG AKY E + + I+ D Y GL + ++ +V D Sbjct: 155 SCFQDSFQGTILAKYAAENLDASKAVILGDNSSDYAIGLTEAFKESYP---GEIVLEDNF 211 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 T G+KDF A++ R+K + D ++ GYY E G +++QAR +G+ +G +G G+ + Sbjct: 212 TEGDKDFQAVLTRIKDVDFDVLFIPGYYTEAGLIIKQARELGIDQAIIGADGFGDEKMVQ 271 Query: 259 IAGDAAEGMLVTMPKRYDQDPAN---QGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 AG + + PAN + V A + + Y AV + A+E Sbjct: 272 TAGAENVSNVYYTGHFSTKAPANDKVEPFVAAFNEKYGKEPSAFNALAYDAVYMIKQAIE 331 Query: 316 RTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGV 356 S + LA+ L + V G + DE + + + Sbjct: 332 DQNSADSLAIAAGLSELKDFVGVTGEITMDENHNPEKSAVVL 373 >UniRef50_B8IZP5 Extracellular ligand-binding receptor n=9 Tax=Bacteria RepID=B8IZP5_DESDA Length = 381 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 101/380 (26%), Positives = 162/380 (42%), Gaps = 19/380 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD-----DIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 MK +AL A IK+ V ++G A G +E G R A K+ Sbjct: 1 MKMGKFFAALAGLALTFGFAGQALAADAAPIKIGVYLPLTGQNAFGGQLELEGVRLAHKE 60 Query: 56 INAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYED 114 + + G + V D+ D +A ++V D + +IG SS +++ E Sbjct: 61 M---PTVLGRPVDLVVVDNKSDKVEAANAVKRLVERDKVVALIGSYGSSLAMSGAEVAEK 117 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQY 173 + I TNP +TQ G ++ R +D QG AA Y E + ++ A++ D Y Sbjct: 118 AKVPGIGTSCTNPLVTQ-GKKYYFRACFIDPYQGAAAATYARENLGFKKAAVLMDMTNDY 176 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 GLA K VV ++G++DF+A + L + D V+ Y+ E ++ Sbjct: 177 AVGLASFFSRSFKKQGGEVVGTLKYSSGDQDFTAQLTELISKQPDIVFMPAYFAEGAIIM 236 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTM----PKRYDQDPANQGIVDALK 289 +QAR +G K + MG + + N + G AAEG L T P + A Q DA K Sbjct: 237 KQARELGAKFRLMGADAMDNPDTLKLGGKAAEGFLHTTFPYDPAMTNMSEAAQRFTDAWK 296 Query: 290 ADKKD-PSGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKG 347 A D + + Y + + A++R S EP A+ K L + +T +G L+ +E Sbjct: 297 ATYPDKETNVNGALGYNSYFIIIDAIKRANSAEPQAIAKALGETKDLSTALGVLSINESH 356 Query: 348 DLKGFDFGVFQWHADGSSTA 367 D G+ ++ DG Sbjct: 357 D-AEMPVGIIEYK-DGKRVY 374 >UniRef50_C8X2A2 Extracellular ligand-binding receptor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2A2_DESRD Length = 393 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 13/353 (3%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 +K+ V +S A G +G A+++IN++GGI G L V YD D A Sbjct: 42 QTQALKIGAVLRLS-KGASDGLPARHGIEIAVQEINSQGGIDGRPLEVVYYDSKDDATTA 100 Query: 82 VAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 V K+++ D ++ +IG + S + A+ + + +++++P T+P +++ G + R Sbjct: 101 VNAVQKLISVDEVEAIIGPMMSGNVLAAAPLCQRNNVVLLTPTGTSPRISEAG-SYTFRL 159 Query: 141 AGLDSSQGPTAAKYILETVKPQ-RIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 Q + L V + I++ + YG+G L + + Sbjct: 160 CSRIDDQARALVQEALSRVGADPTVTILYSNEPYGKGSKELFTRYLAEQDITPATVESFQ 219 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+KDF A + ++K+ N D ++ GY E ++ QAR +G+ +G G + Sbjct: 220 RGDKDFQAQLTKIKQLNPDILFVPGYLQETAPLISQARQMGINALSVGVFGDMAPKYIEL 279 Query: 260 AGDAAEGMLVTMPKRYDQDPA-NQGIVDALKADKKDPSGP-----YVWITYAAVQSLATA 313 AG AAEG L+ +D NQ V+A +A D + +TY AV L + Sbjct: 280 AGKAAEGHLIAGEYNKHKDTEHNQDFVNAYEALLADQPKAPENIMFAALTYDAVHLLRQS 339 Query: 314 LERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 TG+ A+ L + + + G L++D GD++ +F+ +G+ Sbjct: 340 F-STGATTGSAIQSFLDELEAFDGITGTLSFDANGDVQKGGVYLFEVQ-NGTY 390 >UniRef50_D0BNJ8 Branched-chain amino acid ABC transporter amino acid-binding protein n=2 Tax=Granulicatella RepID=D0BNJ8_9LACT Length = 388 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 86/386 (22%), Positives = 166/386 (43%), Gaps = 23/386 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 +K+ +++ I S ++ +K+ ++G +A +G N + A++ Sbjct: 4 LKKFGLGLVSAAILAGCSAGGASNGNTVKLGGNFELTGNVAAYGSAMDNAVKLAVEQ--- 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 KG + +L V YD+ + + +VA K+V++ + V+G + Q + I E I Sbjct: 61 KGKLLDKELKYVSYDNKSEKTEVASVAKKLVSEKVVGVVGPATTGDAQVSIPIMEQAKIP 120 Query: 119 MISPGATNPELT-------QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK- 170 + P T +T + Y +I R D+ QG A ++ + ++AI+ D Sbjct: 121 AVFPATTGDGITLKDAKNPESVYDYIFRVCFSDNYQGVVGAGFVSQKFPNAKVAILQDSA 180 Query: 171 QQYGEGLARSVQDGL--KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPE 228 Y +GL+ + + +V + + + DF A++ LK ++ D +Y GYY E Sbjct: 181 SDYSKGLSEAFEKTYTDAKIGGQIVAKETYQSKDTDFQAVLTSLKSKSFDVLYIPGYYEE 240 Query: 229 MGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA---EGMLVTMPKRYDQDPANQGIV 285 +G +++QAR +G+ +G +G+ + L+ +AG+ A D Q + Sbjct: 241 VGLIIKQARELGITQPIVGGDGLSSEKLAELAGNKANLTNVFYTAHFSAKSTDADVQEFI 300 Query: 286 DALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWD 344 A K + + Y A Q L A+E+ GS + A+ K L ++ + V G Sbjct: 301 KAYKEKYNTTPDSFSALAYDAAQLLMKAIEKAGSTDAQAIKKALAESTDFDGVTGTFTMG 360 Query: 345 EKGDLKGFDFGV-FQWHADGSSTAAK 369 + + FQ +G +AK Sbjct: 361 KDHTPLKSAVVIEFQ---NGEEVSAK 383 >UniRef50_B9JHQ3 ABC transporter substrate-binding protein n=7 Tax=Rhizobiales RepID=B9JHQ3_AGRRK Length = 397 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 15/359 (4%) Query: 3 RNAKTIIAGMIALA-----ISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 R A I ++AL IS A A+ IK+ +V MSGP A++G +GA A+K+ Sbjct: 7 RRALCISTALLALVTLAPNISGAARAEGAPIKLGIVAPMSGPNARYGAFSMHGAELAVKE 66 Query: 56 INAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYED 114 IN GG+ G K+ D P + V+ ++++ D + +VIG + SS T + ED Sbjct: 67 INDAGGVDGHKIELYNADSQGTPVEGVSATRRLIDEDEVGFVIGDVSSSVTLAMQPVVED 126 Query: 115 EGILMISPGATNPELTQR----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK 170 +L+++ ++NP++T G++ R D ++ AKY E + A++ Sbjct: 127 AEVLLLNAASSNPKITYGAGVGGFKWTYRNYPTDENRALIVAKYAAEQRGFTKFAVLSVD 186 Query: 171 QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 YG + L ++ D GE DF +++A+++ + G Sbjct: 187 SDYGRSAIEFTKKYLPQFKGEILSEDYYKEGEVDFRSVLAKIRDNGAQAIILYGLADTTP 246 Query: 231 QMLRQARSVGL--KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDA 287 + RQ +GL K +G A A EG + D PA++ V+ Sbjct: 247 IIARQMIELGLAGKVTLIGNGEFNTEKTIKSAPTALEGAVEAAAWIPAWDSPASKAFVEK 306 Query: 288 LKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEK 346 A K+ + ++ + V LA A+ GS E + L + +G + +D+ Sbjct: 307 FTATYKEAPNNHAYVHWDTVHLLAQAIHEAGSIEQDKVRAALSKIKYKSPVGEVTFDDH 365 >UniRef50_C5CRE7 Extracellular ligand-binding receptor n=27 Tax=Betaproteobacteria RepID=C5CRE7_VARPS Length = 379 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 95/344 (27%), Positives = 165/344 (47%), Gaps = 6/344 (1%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK---LVGVEYDDACDP 78 +K+ G +SGP A G NG R AI+++NAK G K V DD CD Sbjct: 27 QEQVVKIGHSGPLSGPNAFAGKDNENGVRLAIEELNAKKITAGGKTLKFELVSEDDQCDA 86 Query: 79 KQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 K V+VA K+V+DG+KYV+G CS PAS IY + G M+S TNP++TQ GY+++ Sbjct: 87 KSGVSVAQKLVDDGVKYVMGPYCSGVAIPASRIYAEGGT-MVSTVGTNPKVTQGGYKNLF 145 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R D+ G + A Y + +K ++ +I D+ +G+GLA K +V + Sbjct: 146 RIIASDNQIGSSMAVYAAKVLKVSKVGVIDDRTAFGQGLAEEFSKEAKKQGLTIVGQEFT 205 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 T DF+A++ +K + + +++GGY P+ M RQ + + + + +G + V + + Sbjct: 206 TDKAVDFTAILTNMKAKAPEAIFFGGYAPQAAPMARQMKQLAVPGKLLGGDTVCSPATGK 265 Query: 259 IAGDAAEGMLVTM--PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 + GDA ++ ++ + K + Y Y + + ++++ Sbjct: 266 LGGDAVNDLVFCAQGGSILEKAQSGPAFKAKFKKRFNADADAYAASYYDQLMFIGESMQK 325 Query: 317 TGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 S +P + +L V ++D+KG++K VF + Sbjct: 326 ANSIDPDKVGAELYKTTYKGVAATYSYDDKGNMKQAPITVFTFK 369 >UniRef50_A5FZN6 Extracellular ligand-binding receptor n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZN6_ACICJ Length = 373 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 95/354 (26%), Positives = 162/354 (45%), Gaps = 9/354 (2%) Query: 1 MKRNAKTIIAGMIALAIS---HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 M R AGMIAL+ A + I++ ++ M+GP A G + +GA+ A+ +IN Sbjct: 1 MVRKLL-FGAGMIALSCGLGVAHAASGTIEIGMIADMTGPAALSGQHKVDGAKLAVDEIN 59 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKI-VNDGIKYVIGHLCSSSTQPASDIYEDEG 116 A GGI G K+ + DD + V+ K+ N I +IG + S+ Q Sbjct: 60 AHGGINGKKIKLIVEDDRGQNQAGVSAYQKLAANQNIVAIIGSIRSTIVQATLPYVARYK 119 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 I + G T+P+LT G Q + R D+ T A+Y ++T+ +++AI++D +G Sbjct: 120 IPTM-IGGTDPKLTHVGNQWVFRFRPNDTYASATMAQYAVKTMGSKKVAILYDTDAFGSA 178 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVY-YGGYYPEMGQMLRQ 235 + ++ L A VV G T +D+++ + ++K D + Y + QML+Q Sbjct: 179 GNQLLKAALVKDGAKVVSDQGYTTATRDYTSFLEKIKNSGADTLATYMTNSEDEAQMLKQ 238 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 R + LK + +G + A +AG A +G D + A + A Sbjct: 239 LRQLDLKVKIIGSTSIATAVCIQLAGSAVDGTYGVSDFVADGNDAAKAFTKLYVAKYHSQ 298 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGD 348 + Y A+ L+ + + G+ P A+ K ++A G + V G N+D GD Sbjct: 299 PDVFGGWVYDAMNVLSRVIAKDGTA-PAAIQKGIRAVKGYHGVEGTYNFDANGD 351 >UniRef50_A5FVF3 Extracellular ligand-binding receptor n=5 Tax=Bacteria RepID=A5FVF3_ACICJ Length = 381 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 5/349 (1%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A + IK+ V ++G A G + NAKGG+ G K+ DD Q Sbjct: 24 AASGPIKIGVQAPITGAYADEGQGIEKAVKLLADQQNAKGGLLGRKIEVKVCDDEGKASQ 83 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 A A ++VNDG+ VIG S + A IY ++ S G +N +L RGY+ Sbjct: 84 AAICARQLVNDGVIAVIGSYTSGAALAAEPIYARSNVIQTSDGTSN-KLLSRGYKTWFGN 142 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 A +S++ AKY+++ +RIA++ D + GLA +V +KA + V+ ITA Sbjct: 143 AAPNSAEAKFTAKYLIDVRHFKRIAVLTDHSSFATGLADAVIKNIKADHGKVIDKAFITA 202 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G ++F+ ++ +LK D +Y+ GYY + G + Q +G+ F+G + N + IA Sbjct: 203 GSQNFTPVLTKLKALKPDAIYFSGYYSDGGLIKAQMAQLGITATFVGGDANQNVAFGKIA 262 Query: 261 GDAAEGMLVTMPKRYD--QDPANQGIVDALKADK-KDPSGPYVWITYAAVQSLATALERT 317 G AA+G ++ + P + V A KA + P + ++++ A+E+T Sbjct: 263 GSAAKGAIIVNVPGPEQLPYPTAKAFVAAYKAKYHQSPPSVFTLTNADGMRAVMQAIEQT 322 Query: 318 GSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 S +P L L + + G W++KG+ G F F+ ADGS Sbjct: 323 KSVKPAKLEHYLHTMKSFDGLTGQFRWNDKGERVGSPFTAFEVQADGSY 371 >UniRef50_Q2JNB6 Hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein n=3 Tax=Bacteria RepID=Q2JNB6_SYNJB Length = 417 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 93/382 (24%), Positives = 159/382 (41%), Gaps = 35/382 (9%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDA 75 + + A +K+ + +++G + +G+ G + AI INA GGI G VE DD Sbjct: 30 STAQQATQGPVKIGALMSLTGDLQAFGENCLKGIKLAIDQINAAGGILGSPAQVVEADDQ 89 Query: 76 CDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASD-IYEDEGILMISPGATNPELTQ-R 132 + A+ A ++V + + +IG L S T P + + I ISP +T P +T Sbjct: 90 TSAQPAIDAAQRLVTVEKVAGIIGALGSGITIPVATTVSVPNRIPQISPASTAPTITTLE 149 Query: 133 GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANV 192 + RT D+ QG A+ I K +R+AII+ YG+GLA S + + + Sbjct: 150 DNDFLFRTVPSDAYQGVALAQ-ITREEKLERLAIIYINNDYGQGLADSFKTAFEKRGGTI 208 Query: 193 VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVG 252 G+ + + + +LK+ + + GY +LRQA GL +F+ +G+ Sbjct: 209 TKSVPYEPGKASYRSELTQLKEGDPQALVLIGYPENGVVILRQALEEGLFDRFVFTDGMR 268 Query: 253 NASL-SNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKD-PSGPYVWITYAAVQSL 310 + + + + + EG + P+ A Q +A KA + P PY+ Y A L Sbjct: 269 SPDVAAQVGAEKLEGSIGVSPQALTDSKAYQIFAEAYKAAYGELPPTPYIDTAYDAAFVL 328 Query: 311 ATALERTGSDEPLALVKDLKANG--------------------------ANTVIGPLNWD 344 A A+++ GS + A+ L+ G +N+D Sbjct: 329 ALAIQKAGSTDGTAVRDALREVANPPGTEILPGEWAKAVELIGKGEDIFYTGASGSINFD 388 Query: 345 EKGDLKGFDFGVFQWHADGSST 366 E G++ G W G Sbjct: 389 ENGEVAG---TFAHWTFQGGKV 407 >UniRef50_B8FGX7 Extracellular ligand-binding receptor n=3 Tax=Deltaproteobacteria RepID=B8FGX7_DESAA Length = 392 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 88/377 (23%), Positives = 164/377 (43%), Gaps = 22/377 (5%) Query: 1 MKRNAKTIIAGMI-ALAISHTAMA----DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 MKR+ II ++ ALA+S A A IK+ + ++G I + G+ A+ ++D Sbjct: 1 MKRSLSLIIGCLVIALALSPNAWAWGKAKTIKIGINAPITGDIPKVGEGTKYAAQMWLED 60 Query: 56 INAKGG--IKGDK--LVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASD 110 + A GG I G K + V D+ + AV K++ D + ++G S PA Sbjct: 61 VEAAGGLEIDGKKYKVELVIEDNEAKAESAVKANTKMITQDEVIAIVGPQSSKQAVPAGG 120 Query: 111 IYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD- 169 + D MI+P +TNP+ T + ++ R LD QGP A +I E + A+++D Sbjct: 121 VANDWATPMITPWSTNPDST-KDRPYVFRGCFLDPFQGPVVANFITEEFGATKAAVLYDV 179 Query: 170 KQQYGEGLARSVQDGLKAANA--NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYP 227 Y +GLA + + + +VV F+ T + DFS+ + ++ + + ++ YY Sbjct: 180 ASDYPKGLAEFFKIAWEKIHGPGSVVAFESFTTKDADFSSQLTKIIQSGAEVIFTPQYYN 239 Query: 228 EMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP-ANQGIVD 286 E+ +++QA +G + +G + G+A N+ G G+ + + + +D Sbjct: 240 EVALIVQQAHELGWQKPIVGSDSWGSAETVNLCGPDCYGLFFSSHYAAAGATGSTKAFID 299 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGS------DEPLALVKDLKAN-GANTVIG 339 + +T+ ++ + A+E G + A+ L + G Sbjct: 300 RYEKKYGYVPDDVAALTWDSLGIVQKAIESMGKLTGNIEKDRTAVRNALAKVKDFAGITG 359 Query: 340 PLNWDEKGDLKGFDFGV 356 + + E GD V Sbjct: 360 KMTFTEDGDPIKCAVIV 376 >UniRef50_C5ELH4 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELH4_9FIRM Length = 402 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 92/401 (22%), Positives = 162/401 (40%), Gaps = 40/401 (9%) Query: 1 MKRNAKTIIAGMIALAISH----------------------TAMA---DDIKVAVVGAMS 35 MK+ T +A + A++ TA A D I++ + A++ Sbjct: 1 MKKILGTSMALALTFALTACSGNPAPKADAGKGSEVPAKETTAEAVKGDTIRIGITTALT 60 Query: 36 GPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKY 95 GP G G A+++INA GG+ G L V DD + NK++++ + Sbjct: 61 GPSPLNGQRTKEGVTMAVEEINANGGVAGKTLEAVIEDDGATTSGTMNSVNKLLSENVVA 120 Query: 96 VIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYI 155 +IG SS+ + +++ + + G ++P L ++ R DS A KY+ Sbjct: 121 LIGPHMSSNVVAVQEQLKNQKMPFLY-GGSSPTLLDLNNEYGFRVRPSDSLACKIACKYL 179 Query: 156 LETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKE 215 + ++ + I +I D + V+ LK + +G G+KD + + +LK Sbjct: 180 TDKLQCKNIGMIFDNDNWATSAKDVVEATLKEQGVGFIS-EGYNTGDKDMTGQLTKLKNS 238 Query: 216 NIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA-EGML-VTMPK 273 ID + G+ E+ + +Q + VG+ T MG G +++ ++ + EG+ V+ Sbjct: 239 GIDALIIWGHDAEIAIIAKQIKEVGIDTPIMGSAGFAMSTVLDLIDPSVSEGICSVSEFT 298 Query: 274 RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN- 332 Y D G V Y Y AV L A+ER GS EP L L Sbjct: 299 PYSDDERVSGFVKRYHEKYNSDPDLYSAAYYDAVYLLKDAIERAGSTEPDQLRTALAETK 358 Query: 333 GANTVIGPLNWDEKGDL----------KGFDFGVFQWHADG 363 G V+ + +KG++ G + + + DG Sbjct: 359 GLAGVMSTMTASDKGEMIHEMNICQVKDGKAYVIERIFEDG 399 >UniRef50_Q0AV49 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=4 Tax=Bacteria RepID=Q0AV49_SYNWW Length = 399 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 88/350 (25%), Positives = 148/350 (42%), Gaps = 7/350 (2%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 + + IK+ +GA +G +A +G G AI D+NA+GGI G K+ GV D+ + + Sbjct: 41 SQEEVIKLGFLGATTGDVANYGIPGKKGMEMAIDDLNAQGGILGKKVEGVYEDNKGENSE 100 Query: 81 AVAVANK-IVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 +A K I D + ++G C+ T+ A+DI + +++ S GAT + + G ++ R Sbjct: 101 IALIATKYITRDKVVAMVGDPCTGLTKVAADIAQKNKVVIFSAGATGTGVVEIG-DYVFR 159 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGI 198 LD P+ +++ + ++ AII Y L Q+ +KA +V D I Sbjct: 160 NTLLDQFAVPSVVDWMMNSKGWKKFAIITSLNNGYSTALTPVFQEAIKAKGGKIVNEDTI 219 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 GE DF+A I +LK D + + GYY E + +A+ GL +G +G+ L Sbjct: 220 NDGETDFTAQITKLKNTGADVLVFTGYYREAALLQNEAKKQGLDITLLGGDGLYGHDLIK 279 Query: 259 IAGDAAEG--MLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 + DA E + P + K+ + Y A+ LA A+ Sbjct: 280 LGKDAVEEKVIYYCGFSSDQPSPETDAFIKKYVEKYKEQPDMFSAQYYDAIMILAKAMTD 339 Query: 317 TGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 S +P +L K V G + + + DG Sbjct: 340 AKSTDPSVFKDELAKLKDYPGVSGNTTFRADREPIKSPICLITVK-DGEF 388 >UniRef50_A8MJQ2 Extracellular ligand-binding receptor n=6 Tax=Bacteria RepID=A8MJQ2_ALKOO Length = 395 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 85/394 (21%), Positives = 157/394 (39%), Gaps = 34/394 (8%) Query: 1 MKRNAKTIIAGMIALAISHTAMA-------------------DDIKVAVVGAMSGPIAQW 41 MK+ ++ ++ L++S D IK+ + ++G A Sbjct: 1 MKKRMAILVVWILVLSLSLVGCGGNTPVAPVDGNGGNASNDGDVIKIGIFEPVTGAYAAG 60 Query: 42 GDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHL 100 G++E G R A + + G K+ V D+ D +A + A ++V + + +IG Sbjct: 61 GELEVEGIRLANELYPE---VLGKKVELVLADNKSDVVEAASAAARLVEKEKVTAIIGSW 117 Query: 101 CSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK 160 S + A D+ ++P ATNP +T +G R +D QG A Y +K Sbjct: 118 GSGLSIAAGDVI-KGKAPAVAPSATNPLVT-KGNDFYFRVCFIDPFQGTVMANYAANNLK 175 Query: 161 PQRIAIIHD-KQQYGEGLARSVQDGLKAANAN---VVFFDGITAGEKDFSALIARLKKEN 216 ++ AII + Y GLA+ D K + +V G++DFSA + + + Sbjct: 176 AKKAAIIQEVSNDYSIGLAKFFTDSFKELTGDANAIVEVANYQTGDQDFSAQLLNISNKK 235 Query: 217 IDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD 276 D ++ G + E +++QAR +G+ T +G + I +A EG +++ + Sbjct: 236 PDVIFAPGNFTESALIIQQARQLGIDTPIIGGDTWETPEFIEIGKEAVEGTVLSTFFTSE 295 Query: 277 Q--DPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG- 333 ++ ++A + + Y A + A+ER G+ + L + Sbjct: 296 TPITKESEKFLEAYRNKYGKEPAAVTALGYDAYLLILDAIERAGTTDYDPLKNAIAQTKN 355 Query: 334 ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 G + DE GD + + DG T Sbjct: 356 FEGAAGVITLDENGDAVKDA--ILKIVKDGKFTY 387 >UniRef50_B4SCM8 Extracellular ligand-binding receptor n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SCM8_PELPB Length = 373 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 84/372 (22%), Positives = 151/372 (40%), Gaps = 15/372 (4%) Query: 1 MKRN--AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M++ II L + + I + ++G A +G G AI++IN Sbjct: 1 MRKFKVLAIIIIISAYLFACGNSKKETINIGCSLPLTGEGANYGRSVKEGVDLAIEEINQ 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 + L + DD DP++ V NK++ D + +IG SS T + I + Sbjct: 61 S-EMFDLPLKVIYEDDKMDPREGVNAINKLITADNVPIIIGPFGSSITLAVAPIANKNKV 119 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 +++ AT + G +I R +S QG A + ++ ++ AII+ YG L Sbjct: 120 VLLGASATADNIKDAG-DYIFRITPPNSKQGNDVASFCFNSLNSKKAAIIYQTNDYGTTL 178 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 + + V+ +G+ G KDF I ++K + +D V++ + E G L+Q++ Sbjct: 179 KTAFESEYLKLGGEVLIVEGVDLGNKDFKTQILKIKSKQVDVVFFPLHVAESGNFLKQSK 238 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD--QDPANQGIVDALKADKKDP 295 +GL +F+ +G L +AG+AAEG T D K Sbjct: 239 ELGLNVKFISCDGAMVDDLLKLAGNAAEGTYYTSLALAYGMNDSLINSFNTNFKKKYNKE 298 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLK-----ANGANTVIGPLNWDEKGDLK 350 Y Y LA AL++ + +K++ N N + G ++D G++ Sbjct: 299 PDVYAAYYYEVTYILAHALKKANGNIGQ--IKEILYSINGENAYNGITGLTSFDTYGEVD 356 Query: 351 GFDFGVFQWHAD 362 F ++ + Sbjct: 357 -KSFSIYVVSNN 367 >UniRef50_Q1MR26 Branched chain amino acid ABC transporter, periplasmic amino acid-binding protein n=4 Tax=Proteobacteria RepID=Q1MR26_LAWIP Length = 379 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 17/378 (4%) Query: 1 MK---RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 MK + ++ AI + ++ IK+ V ++G A G +E +G + A +N Sbjct: 1 MKFAVMFGTILTIILLYGAIIPSHASEPIKIGVYLPLTGQNAYGGQLELDGIKLAHD-LN 59 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEG 116 + + D+ D +A ++++ D + +IG SS + ++ E Sbjct: 60 PV--VLNRPVQLFIVDNKSDKVEAANAVKRLIDQDKVCVIIGSYGSSLSLAGGEVAEQAK 117 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGE 175 I +I TNP +TQ G ++ R +D QG A Y + + ++ A + D Y Sbjct: 118 IPVIGTSCTNPLVTQ-GKKYYFRACFIDPYQGAAVATYATKNLGVKKAATLTDVSSDYSV 176 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GL + +V AG++DF+A + L + D ++ Y+ E +++Q Sbjct: 177 GLTAFFKKAFVHQGGEIVANLKYNAGDQDFTAQLMDLIAKKPDLLFVPSYFSEGAIIIKQ 236 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGML-VTMPKRYDQDPANQGIVDALKADKK- 293 A+ +G MG + + N I G + G L T P +Q +A +K Sbjct: 237 AKELGATFILMGADAMDNPDTLEIGGQSINGFLHTTFPYDIHMPHMSQEATKFTQAWRKT 296 Query: 294 ---DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIGPLNWDEKGDL 349 + Y + A++R S P A+ L+ T +G L ++ D Sbjct: 297 FPYKDPNVNSALGYNCYNIVIDAIQRANSSNPEAITHALENTKNLPTALGILTINKHHD- 355 Query: 350 KGFDFGVFQWHADGSSTA 367 G+ Q+ +G Sbjct: 356 AEMPVGIIQYQ-NGKRVY 372 >UniRef50_B2T1G8 Extracellular ligand-binding receptor n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T1G8_BURPP Length = 387 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 9/365 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD---IKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 +KR A +I IA A ++D +++ ++GP A G N AR AI+D N Sbjct: 8 LKRFAGGVIFS-IATLWCQGAQSEDAAVVRIGFAAPLTGPSAADGKEMKNAARLAIEDAN 66 Query: 58 AKGGIKGDK---LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYED 114 A+ G++ DD DP+ A VA + V+ + V+GH S + AS++Y+D Sbjct: 67 ARHPKIGERTVSFELAPLDDQADPRVASQVAQRFVDMSVAGVVGHFNSGCSIAASNVYDD 126 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYG 174 I +SP +T+ T RG + R G D+ G +Y++E + +R+AI+ D+ +G Sbjct: 127 AQIAQVSPSSTSAIYTLRGKKSSFRVVGQDAVAGAELGRYLVEDFQARRVAIVDDRTDFG 186 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 GLA V D + + +V + +T DFSA++ R++ +N D V +GG+ + Q++R Sbjct: 187 AGLADRVSDFIAQRHVAIVAREYVTDKTVDFSAILTRIRSQNADLVVFGGFDAQAAQIVR 246 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKD 294 + RS G+K G EG NA N+A EG + P + +A K Sbjct: 247 RMRSAGMKATLAG-EGFNNAIFLNLARGDGEGTVTIQPGLPLNRMPAKDFASRYEARYKA 305 Query: 295 P-SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFD 353 G Y A + A+ S + +++ ++ + + GP+ +D+ GDL Sbjct: 306 KLEGFQAPYAYDATSVIVQAVLAAQSARAVDVLQAVRKTNMDGLTGPIAFDKNGDLAAAP 365 Query: 354 FGVFQ 358 + +++ Sbjct: 366 YTIYR 370 >UniRef50_Q7WM42 Putative amino acid ABC transport system, substrate-binding protein n=2 Tax=Bordetella RepID=Q7WM42_BORBR Length = 379 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 85/330 (25%), Positives = 142/330 (43%), Gaps = 7/330 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 I V V +SG A G + GA A++ INA GG+ G L D+AC+P + V Sbjct: 25 QPIVVGVSTPLSGSAAFQGQHDRWGAELAVEQINAAGGVLGRPLQLNVQDNACNPAEGVN 84 Query: 84 VA-NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR----GYQHIM 138 + N + V G +CSS T I E + M+ ++ +T++ G Sbjct: 85 SVGRMLENRDLVAVSGAMCSSVTLALMPIVERASVPMLVSSSSAASITEKAGAGGNIWTF 144 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R D S A Y+ + + ++IA++ + YG G A ++ LK + + Sbjct: 145 RAGPSDDSMAVALATYLKDEARFKKIAVLGENTDYGRGGAAAIAKALKPLGVTITSSEYY 204 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 G +DF+ ++ RLK D + + +RQ R G++ G +G Sbjct: 205 DKGTQDFTTVLTRLKLAAPDAIALYTVGADQINFIRQYRGFGMRVPLTGRIELGGLQAEG 264 Query: 259 IAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERT 317 I A G + D PANQ V A K K+ I+Y +Q LA A++R Sbjct: 265 IKSGAINGATSVFQYAAELDTPANQAFVKAYKEKYKEDPLLQSAISYENIQLLADAIKRA 324 Query: 318 GSDEPLALVKDLKANGANTVI-GPLNWDEK 346 GS + A+ ++A+ +++ G + +D+ Sbjct: 325 GSVDRKAVRDAIQASDYASMMGGRVAFDKN 354 >UniRef50_Q2RMX3 Extracellular ligand-binding receptor n=2 Tax=Bacteria RepID=Q2RMX3_RHORT Length = 392 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 159/373 (42%), Gaps = 11/373 (2%) Query: 8 IIAGMIALAIS---HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 ++AG ALAI A AD IK+ ++G A NGA+ AI +NA GG+ G Sbjct: 11 LLAGAFALAIGFAGPAASADPIKIGGAFNLTGGQASLDGPAKNGAQLAIDTLNAAGGVNG 70 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 L V YD DP ++ ++++N D + +IG S + G+ I+ G Sbjct: 71 TPLELVVYDGKTDPAVVASLGSQLINSDKVSAIIGFSDSDPVLALGPNAQKAGVPFIAVG 130 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQ 182 AT+P+L + + D++Q A + ++ +K + + ++ D +Y L++ + Sbjct: 131 ATSPKLPDQIGDTMFLACFGDNTQAAVGASFAIDDLKAKSVYVLEDTANEYATLLSKYFR 190 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKE--NIDFVYYGGYYPEMGQMLRQARSVG 240 + + V+ D G+K F+A I ++K D +Y +G ++RQ R G Sbjct: 191 ETFEHLGGKVIGRDTYRTGDKSFTAQITKIKAAAEKPDILYIAATPDSIGLVVRQVRQAG 250 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN--QGIVDAL-KADKKDPSG 297 LK +G +G L + G +A + T + DA KA P Sbjct: 251 LKLPIVGGDGYDTPLLLEVGGASANNVYFTTHSFVSDSAPGPMKTFFDAYGKAYGNAPEN 310 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGV 356 + + Y V +A A++R GS +P A+ K L + V G + + E + V Sbjct: 311 AFAALGYDTVMLVADAIKRAGSGDPAAIRKALTETKDLAGVTGAVTFAEGSRVPVKSVTV 370 Query: 357 FQWHADGSSTAAK 369 AA+ Sbjct: 371 IGVKDKALYKAAE 383 >UniRef50_D1BLT9 Extracellular ligand-binding receptor n=4 Tax=Veillonellaceae RepID=D1BLT9_VEIPT Length = 382 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 85/372 (22%), Positives = 160/372 (43%), Gaps = 16/372 (4%) Query: 1 MKRNAKTIIAGMIALAI-------SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAI 53 +K+ A +AG++A+A + +A +++ K+A++ +G A +G+ GA A+ Sbjct: 6 LKKAAIFGLAGVMAVAAGCGGNKDAGSANSNEAKIALLTTTTGGAAAYGESIKAGAELAV 65 Query: 54 KDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIY 112 +INA K+ + D D +A+ NK++ D + VIG + S A + Sbjct: 66 SEINAD--ANAVKINLLVEDTKGDKNEAINAMNKVIAKDKVVAVIGPMLSGEMMAAGPVA 123 Query: 113 EDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH-DKQ 171 ++ + T +T G +I R A +S TA K +T+ + AI++ + Sbjct: 124 NKSKVVALGTSTTAEGITDIG-DYIFRNAVPESLAVDTAIKEAHKTLGFKTAAIMYSNNN 182 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 + + + L++ +V + + DFSA + ++++ D + Y E Sbjct: 183 DQMVSVNNTARKALESEGVQIVDTETFADKDTDFSAQLTKIQQAKPDVIVVASLYQEGAL 242 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ-DPANQGIVDALKA 290 ++++ R +G+ +G G + IAGDAA G++V P ++ D + A A Sbjct: 243 IMKKMREMGMNQPVVGSNGFNSPQFIKIAGDAANGVIVGTPWFPNKEDQKVKDFRKAYVA 302 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGS-DEPLALVKDLKAN-GANTVIGPLNWDEKGD 348 + Y AV TAL++ GS + + LK V G ++EK D Sbjct: 303 KYGKEPDQFAAQAYDAVYLYETALKKAGSTTDREKFREALKNIADFVGVTGQFKFNEKRD 362 Query: 349 LKGFDFGVFQWH 360 + V Q Sbjct: 363 P-SMEVQVLQIK 373 >UniRef50_Q13IR8 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=21 Tax=Proteobacteria RepID=Q13IR8_BURXL Length = 399 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 85/336 (25%), Positives = 142/336 (42%), Gaps = 6/336 (1%) Query: 15 LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDD 74 LA + +D V V G +SG AQ+G+ G A++ IN GGI G L D Sbjct: 35 LAHAAGTSSDPYWVGVTGPLSGQDAQYGEQWKRGFDLALEQINGSGGIDGHPLNYDFEDS 94 Query: 75 ACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG 133 DP+QAV +A K V+D I +G L S ++ AS +Y+ G++ ++P+ T +G Sbjct: 95 RSDPRQAVQIAQKFVDDKRILLELGDLSSGASMAASPVYQRGGLVQFGFTNSHPDFT-KG 153 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 ++ TA + + P A Y + ++IA+++ +G + A VV Sbjct: 154 GDYMWSTAISQAEEQPMLAHYATTGLGFKKIAVLYLNTDWGRTSKDIFAKAATSDGAQVV 213 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 +G EKDF A + R++ N D + YY + Q++RQAR+ G++ V + Sbjct: 214 AAEGYQPNEKDFRATLTRIRSANPDSIVLISYYSDGAQIVRQARAAGVREPIAAVGSVYS 273 Query: 254 ASLSNIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 + G A G+ + D P Q V +A + Y A+ Sbjct: 274 PKFLELGGAAVNGVYTESNFFPGDPRPEVQSFVTRYRAKYGGDPDTFAARAYDAMILAGE 333 Query: 313 ALERTGSDEPLALVKDLKANG--ANTVIGPLNWDEK 346 + R G A+ + + G +D + Sbjct: 334 VIRRYG-ANRSAVRDGFAKIDNVPSVIFGKFKFDPQ 368 >UniRef50_C5EHL3 Extracellular ligand-binding receptor n=4 Tax=Clostridiales RepID=C5EHL3_9FIRM Length = 386 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 87/377 (23%), Positives = 153/377 (40%), Gaps = 17/377 (4%) Query: 2 KRNAKTIIAGMIALAISHT---AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 K A T+ A ++A +++ A IK+ V +G G E G R A K+++ Sbjct: 5 KIMAVTMAACLVAGSLAGCGKKAEEKVIKIGVFEPTTGENGGGGFQEVLGIRYA-KEMHP 63 Query: 59 KGGIKG--DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 I G K+ VE D+ D +AV A K+V++ + V+G S + A I+ D Sbjct: 64 TVTINGEEYKVELVEVDNKSDKTEAVNAAQKLVSEKVSVVLGSYGSGVSIAAGQIFADAK 123 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGE 175 I I TNP++T+ G R +D QG A Y + + A+I Y Sbjct: 124 IPAIGCSCTNPQVTE-GNDFYFRVCFIDPFQGTVMANYAFQN-GAKSAAVITQLGDDYSS 181 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GL +D +V + + DF A++ +K N D ++ +++Q Sbjct: 182 GLGSFFKDAFAKLGGEIVSEEQFQTNQTDFKAILTNIKAANPDIIFAPSSITTAPLIIKQ 241 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ--DPANQGIVDALKA--- 290 AR +G+ + N+++ AG AEG++++ + + + K Sbjct: 242 ARELGITATIAAGDTWENSTIIENAGKDAEGVVLSTFFDEAEPANDEAAAFIKGFKEYLV 301 Query: 291 --DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 ++D + Y + + A+E S + A+ LK + V G + ++E GD Sbjct: 302 KNKQEDIIPAVSALGYDSYLAAIKAIETANSTDTTAIRDALKGVQIDGVTGSITFNETGD 361 Query: 349 LKGFDFGVFQWHADGSS 365 D + DG Sbjct: 362 -ANKDIAFIKTIKDGKF 377 >UniRef50_C0CTG8 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTG8_9CLOT Length = 392 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 85/380 (22%), Positives = 163/380 (42%), Gaps = 21/380 (5%) Query: 1 MKRNAKTIIA--------GMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 M+R K I A +A +D I + +G ++G A WG++E N + Sbjct: 1 MRRKFKRIAAAAMATAMALSVAACGGSKKDSDKIILGYMGPLTGESALWGEVESNTLKML 60 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANK-IVNDGIKYVIGHLCSSSTQPASDI 111 +++ NA GGI G ++ YD+ D + A K + NDG+ IG SS +++ Sbjct: 61 VEETNANGGIIGKQIELKIYDNRGDAVETTNAARKALQNDGVVAFIGPDSSSGAIALAEV 120 Query: 112 YEDEGILMISPGATNPELTQR-----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAI 166 E+ + I+ TN ++TQR + R D G Y + + Q++AI Sbjct: 121 CEEYKVPHITTTGTNYKVTQREEDGSVRPYAFRICLSDPQLGDIMGGYAKDKLGYQKVAI 180 Query: 167 IHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKEN-IDFVYYGG 224 +++ +Y G+ ++ + +A V + G+ DF A ++++K++ D + Sbjct: 181 LYEISSEYSLGITQNFTNSFEAKGGQVTITEAYKTGDVDFRAQLSKIKEKGDFDALMIPA 240 Query: 225 YYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGI 284 Y E+G + +QARS+G++ F+G + L IA D + + + D + Q Sbjct: 241 NYKEVGLIAKQARSLGIEVPFLGVDAWMMQDLFEIAKDEVQDAVFPCAMDVN-DESLQEF 299 Query: 285 VDALKADKK---DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIGP 340 +A + D G ++ Y + + A+E G +P + ++ A + Sbjct: 300 KNAFQEKWNMDPDKGGTDAYLAYDCFELVKYAIETAGEADPQKIRDAMENAKDVQCLTSV 359 Query: 341 LNWDEKGDLKGFDFGVFQWH 360 ++ D + +FQ Sbjct: 360 ISMDPQTHNPVRTASIFQIQ 379 >UniRef50_D2LDZ1 Extracellular ligand-binding receptor n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDZ1_RHOVA Length = 404 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 148/364 (40%), Gaps = 16/364 (4%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 A+ IK+ + G +G + G +G + A++++N GG+ G L VE DD + Sbjct: 23 AAEPIKIGLSGPFTGGSSSMGVSMRDGVKLAVEEVNKAGGVLGRPLQLVERDDEAKNELG 82 Query: 82 VAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ----- 135 +A +++N + + +G + + A Y++ I +I+ AT +T + + Sbjct: 83 AQIAQELINKEKVVATLGFINTGVALAAQRFYQEAEIPVINNVATGTVITNQFKKPDYDT 142 Query: 136 -HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 ++ RT+ DS Q A+ ++ ++IAI+ D YG+ ++ L+ V Sbjct: 143 NYVFRTSAYDSIQAGMMAEEAVKGRGYKKIAILADSTNYGQLGREDLEKALEKLGVKPVA 202 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + + D +A + R K+ + + G PE+ Q+ +G + Sbjct: 203 VEKFNIKDVDMTAQLLRAKEAGAEALLCYGIGPELAQIANGRAKLGWNVPMITSWPSSMQ 262 Query: 255 SLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADK---KDPSGPYVWITYAAVQSL 310 S +IAG G+++ D+ P +DA K P+ Y +V L Sbjct: 263 SFIDIAGANGNGVMMPQTFIEDKTLPKRAAFLDAYYKTFGVTKIPTPVAGAQGYDSVLLL 322 Query: 311 ATALERTGSDEPLALVKDLK--ANGANTVIGPLN--WDEK-GDLKGFDFGVFQWHADGSS 365 A A+ + GS + A+ L+ V+ + E + + VF DG Sbjct: 323 AAAINQAGSTDGPAIRAALEDLKEKVEGVVTTYEKPFSETDHNAISANIPVFGMVKDGKI 382 Query: 366 TAAK 369 A+ Sbjct: 383 VYAR 386 >UniRef50_B0UEJ1 Extracellular ligand-binding receptor n=3 Tax=Rhizobiales RepID=B0UEJ1_METS4 Length = 378 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 79/360 (21%), Positives = 155/360 (43%), Gaps = 11/360 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD---DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 M+ K + A + L A A +K+ + ++GP +++G G A+ +IN Sbjct: 1 MRSLMKGMTAAAMLLGAVAGAGAQDKSPVKLGAIEILTGPNSRYGVAIQRGFDLALAEIN 60 Query: 58 AKGGIKG-DKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDE 115 GG+ G L D A +QA+ A K++ D + ++G S+ A + + Sbjct: 61 RNGGVLGGRPLALAYEDSAGAKEQALNAARKLIGRDKVPLILGPTLSNEMFAAGPVANER 120 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH-DKQQYG 174 + ++ T +T G ++ RT+ ++ P + E +R+A+++ + + Sbjct: 121 KVPIVGTSTTANGITAIG-PYVFRTSLPEADVIPVTLRTAKEKFGVKRVAVMYGNDDAFT 179 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 + ++ GL+ + + + + DFSA + ++K N D + + Sbjct: 180 KSAYDVMKAGLEKLGIETLTTETFGSKDTDFSAQLTKIKGLNPDAIVLSALVEAASGIAL 239 Query: 235 QARSVGLKTQ--FMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKAD 291 QAR +G+ + +G G+ + L IAG AA+G +V P +DPANQ V A + Sbjct: 240 QARQLGIDPKVFIIGGNGLNSPKLGEIAGAAADGTIVGSPWFVGKKDPANQAFVAAFREK 299 Query: 292 K-KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 D + Y + +A A++ G+ + + L + V+GP ++ E D Sbjct: 300 YSGDSPDQFAAQAYDTLFIVAKAIDAAGAPDSEKIKDALIKVKHSGVMGPFSFSESRDPA 359 >UniRef50_Q2IRP0 Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IRP0_RHOP2 Length = 378 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 9/352 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MKR ++A +ALA A A +I + +GP A + G + A+ + NA G Sbjct: 3 MKR---LMVAIGLALAAPVAADAQNIVIGASIPDTGPAAAPAIWQRWGYQLALDEANAAG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G K+ + YD+ C+P +AV VANK++ + ++G CSS+T + I ++ Sbjct: 60 GVLGKKVEMLAYDNRCNPSEAVNVANKLIEAKVVAIVGAHCSSATLATMPLIAAAKIPLV 119 Query: 121 SPGATNPELTQ----RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 A++P++T G + R D Y+ + K +R+AI+ + +G G Sbjct: 120 DGIASSPKITDLSGVGGNEWTFRINPSDDDMMNALGIYLSGSSKIKRVAILGEDTDFGRG 179 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 A + K V+ D DF+AL+ R+++ D + + LR A Sbjct: 180 GAAAFAAVAKKHGLEVISTDFHPQSYPDFTALLTRIQQSKPDAIAIFQLAGDQLNFLRNA 239 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP-ANQGIVDALKADKKDP 295 +G++ F+G G +L I EG + Y D AN+ ++ K Sbjct: 240 MQLGVRIPFIGRFDPGGNNLQIIQAGGMEGSITAWTYSYLVDTAANKAFAAEIEKRHKTT 299 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIG-PLNWDEK 346 W Y A++ L A++ G+ +P A+ +K V+G + +D+ Sbjct: 300 PVLQTWAGYDAMRLLLAAIKNAGATDPTAIRDAIKKIEFTNVMGAKVTFDDH 351 >UniRef50_C2D7C9 Branched chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7C9_9ACTN Length = 434 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 85/370 (22%), Positives = 161/370 (43%), Gaps = 20/370 (5%) Query: 5 AKTIIAGMIALAIS----HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 A T++ G+ +A + +D +KV V+G +G +AQ+G NG + +K NA G Sbjct: 51 AATLMGGLSIIAGCNNNMSSQSSDSLKVGVMGPYTGDVAQYGLAIRNGVQLYVKQFNANG 110 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G + + D+ D +A V K+++ + +IG + S+ + + + ++ + +I Sbjct: 111 GVNGKTVDLMIEDEKGDSTEAKNVYEKMLDAKVLAIIGDVTSTPSIAVAQVSANDNMPLI 170 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLAR 179 S AT P T G+ + R D QG AK+ + + + I++ Y G+ + Sbjct: 171 SASATAPAFTSFGH-NAFRATMTDDFQGKVMAKFAQKQ-GYKTVGTIYNSGGDYESGINK 228 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + NV AG+ DF+A + + + D V+ YY + G+++ QAR + Sbjct: 229 IFVEECQQLGINVTSQQAYAAGDVDFNAQLTAIFATSPDAVFCPNYYQDSGKIVTQARQL 288 Query: 240 GLKTQFMGPEGVGN---ASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDP 295 G K F+G +G N + + EG P + D + V A + Sbjct: 289 GYKGVFLGADGWANMVDGDDKYASPEDLEGCYYNCPFIVENDNDKVKDFVKAYHDEYGKN 348 Query: 296 SGPYVWITYAAVQSLATALE--------RTGSDE-PLALVKDLKANGANTVIGPLNWDEK 346 + + Y A + AL+ + G++E AL+ + + + V G + ++ Sbjct: 349 PSNFCALGYDAAMMMCAALKTVDDKGDVKPGTEEYKQALIDAIAQDKVDGVTGSIAFEGT 408 Query: 347 GDLKGFDFGV 356 GD V Sbjct: 409 GDPVKSTLVV 418 >UniRef50_C7NDV1 Extracellular ligand-binding receptor n=3 Tax=Leptotrichia RepID=C7NDV1_LEPBD Length = 372 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 100/360 (27%), Positives = 171/360 (47%), Gaps = 13/360 (3%) Query: 1 MKRNAKTI-IAGMIALAISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 MK+ + + + L+ A D IK+ V+GA++G +AQ+G NG + +K+IN Sbjct: 1 MKKILFLVSLLALFVLSCGAKASKDKNVIKIGVIGALTGNVAQYGTSTINGFKLKVKEIN 60 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEG 116 A GGI G K+ VE D D ++A+ K+V D I +G + S + + + + Sbjct: 61 AAGGINGKKIEIVEADSKGDVQEAINAFKKMVSQDKIDIFVGEVTSGPSLAIAPLAQQAK 120 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGE 175 I MI+ T ++T +G + RT D QG AKY ++ + I ++ + Y Sbjct: 121 IPMITATGTAFDIT-KGKDFVYRTTFTDPYQGVVVAKYA-KSKGYKSITVLTNTGSDYSV 178 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GL+ + ++ + V + TA +KDF AL+ ++K N + ++ YY +G +L Q Sbjct: 179 GLSNAFKEQAQKEGIQ-VKEEQYTADDKDFRALLTKVKGYNSEVIFVPDYYNTIGLILTQ 237 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEG-MLVTMPKRYDQDPANQGIVDALKADKKD 294 A+ +G+ +QFMG +G + G A G + + D D Q + A K + K Sbjct: 238 AKELGINSQFMGGDGW--DGIQTNFGKVANGAVFASQFAPDDPDQNVQKFIAAYKNEYKI 295 Query: 295 PSGPYVWITYAAVQSLATALERTGS-DEPLALVKDLKA-NGANTVIGPLNWDEKGDLKGF 352 + + Y L TAL+ A+ + +K NGAN V G L +D + + + Sbjct: 296 DPIIFAALGYDTGTILETALKNVSDLSSKDAIKEAIKNFNGANLVTGSLKYDAERNPEKK 355 >UniRef50_A9KIM2 Extracellular ligand-binding receptor n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIM2_CLOPH Length = 388 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 84/392 (21%), Positives = 171/392 (43%), Gaps = 31/392 (7%) Query: 1 MKRNAKTIIAGMIALAISHT------------------AMADDIKVAVVGAMSGPIAQWG 42 MK++ K + + +A A++ + + A K+ +G ++G A +G Sbjct: 1 MKKSLKKLASLSLATAMAISLVGCGTKEGGSTPGNENGSGAATFKIGGIGPLTGEAASYG 60 Query: 43 DMEFNGARQAIKDINAKGGI-KGDK---LVGVEYDDACDPKQAVAVANKIVNDGIKYVIG 98 NGA AIK+IN GG+ GDK L DD P+ AV N +++ G + ++G Sbjct: 61 ISVKNGATIAIKEINDAGGVTVGDKNYILEMNFADDQASPEIAVTAFNTVMDWGAQAILG 120 Query: 99 HLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILET 158 + S S + GI ++P + E T+ Y++ R D QG T A + + Sbjct: 121 SVTSGSCLAIRKDTFETGIFQLTPSGSAAECTE--YENAFRLCFTDPLQGVTLAN-LAKE 177 Query: 159 VKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENI 217 + ++IAII++ Y G+ ++ + + +V + DF+ + ++K + Sbjct: 178 LGYEKIAIIYNNSDEYSTGVMQAFSEQVTLNGGTIVASEAFAKNAIDFNTQLTKIKATDA 237 Query: 218 DFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA-EGMLVTMP-KRY 275 + ++ YY + + +QA +G+ F+G +G + L+ + A EG + P Sbjct: 238 EVIFVPAYYNDAAYITQQASDLGMNLPFLGSDGW-DGVLAQVKDPAVLEGAIFLSPFFAS 296 Query: 276 DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGAN 335 D+ P + V+ +++ + Y +V + ALE+ S + ++ + + Sbjct: 297 DEAPVLKKFVETYQSNYNAVPDQFAADGYDSVYVIKAALEKASSVDSKDMISAMTQITVD 356 Query: 336 TVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 + G +++ G+ + DG+ T+ Sbjct: 357 GLTGSVSFTADGEPNKGAKYIEI--KDGNYTS 386 >UniRef50_D2L0U6 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0U6_9DELT Length = 418 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 145/366 (39%), Gaps = 19/366 (5%) Query: 13 IALAISHTAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK---GDKLV 68 LA+S AD IK+ V +SGP A G A+++INA GGIK G KL Sbjct: 23 AVLAVSPAVAADKTIKIGNVEPLSGPSASVGVQGKQAREMAVEEINAAGGIKSLGGAKLE 82 Query: 69 GVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNP 127 V D DP V +++N + + + G S+ T PA+ + E GI + P A Sbjct: 83 LVYADSKSDPTVGVTETERLINTEKVNLMTGCWNSAVTYPATQVAERYGIPFVVPVAVRD 142 Query: 128 ELTQRGYQHIMRTAGLDSSQGPTAAKYILET-----VKPQRIAIIHDKQQYGEGLARSVQ 182 +T+RG++++ R A DS +++ + VK + IA + + +G G A + Sbjct: 143 TITERGFKNVFRIAAKDSWWVRDQFRFLKDMQEETGVKLKTIAFVFENGDWGTGFAEKWR 202 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 + K +V + + D + ++ +LK N D V + + + ++ Sbjct: 203 ELAKKDGYQIVLDEPYPSTATDLTPVVTKLKSANPDIVLLVSNAADAILLTNNMTEMQVR 262 Query: 243 TQFM--GPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPY 299 + + G + G A G+ + D + P + K Sbjct: 263 PKVVLASGGGHADPKFLENTGTNALGLFDEVEWNTDVNKPGAKETNAKFKKKYGYDLTGE 322 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPL------NWDEKGDLKGFD 353 YAAV +A ALER S +P + L T G + +DE G K Sbjct: 323 SVDAYAAVYVIADALERAASTDPAKIRDALATTNLTTGPGMIVSYDGVQFDETGQNKNAG 382 Query: 354 FGVFQW 359 + Q Sbjct: 383 IVIVQV 388 >UniRef50_A5CZK0 ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CZK0_PELTS Length = 379 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 102/355 (28%), Positives = 155/355 (43%), Gaps = 9/355 (2%) Query: 14 ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYD 73 H + +DI + + A M G A+ +IN +GGIKG K+ VE D Sbjct: 27 LAGCFHRSGREDIVIGLAWP----FATKNSMLKEGVELAVDEINGRGGIKGKKIRLVEKD 82 Query: 74 DACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR 132 D V A +V + VIGH S + AS IYE+ G+LM+SP +T P LTQR Sbjct: 83 DEGTVTGGVNAAQSLVKIPNLVAVIGHRASFVSIAASAIYEEAGVLMLSPASTAPNLTQR 142 Query: 133 GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANV 192 GY+ I R D A + +R+A+ + + YG GLA S +D K A + Sbjct: 143 GYKLIFRNIPGDDEIARQLALFAA-GRGHRRMAVYYSEDSYGLGLANSFEDHAKKAGIKI 201 Query: 193 VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVG 252 + A + D + L + + + D ++ Y P+ + + A G+ F+ + + Sbjct: 202 IDRISYYADQDDLARLAKKWQALDYDGIFVAHYMPDGAEFIADAAKAGITAPFLAGDAMD 261 Query: 253 NASLSNIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 L IAG AAEG +V ++ D P + ++ PY Y AV LA Sbjct: 262 TPELYKIAGKAAEGTVVGSIFNPGDPRPETRQFIENFSKKYNTAPTPYAAQGYDAVHLLA 321 Query: 312 TALERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 A+E +GS +P A+ L+ G + E GD G + V + DG Sbjct: 322 AAVEESGSTDPRAVAGKLRTFKDRPGAAGTHTFTENGDDVG-NLVVKKVIRDGQF 375 >UniRef50_A8IHA6 ABC-type branched-chain amino acid transport systems n=2 Tax=Proteobacteria RepID=A8IHA6_AZOC5 Length = 390 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 90/348 (25%), Positives = 156/348 (44%), Gaps = 6/348 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 + + +K+ +G +SG AQ G NG + A+ NA G K+ V DDA + Sbjct: 41 APAKAQETVKLGFIGPLSGGNAQQGLAARNGFQLAVDQANAAG--LPFKIEPVILDDAAN 98 Query: 78 PKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 P+ V+ A K+ ND + GH S ++ G+ + GA +P++T++ Sbjct: 99 PQTGVSAALKLTNDPKVVAATGHWNSGVALATIPVFSRAGVPFVIWGAISPKITEKNNPM 158 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 + R + AK+ + +RIAI+ D YG + + +A ++ + Sbjct: 159 VSRVVTTLVNTNAPLAKWAAANIG-KRIAIVSDTSDYGAANLDNFKKFFEADGGTIIAAE 217 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 G DF AL+ ++K N D +Y+GG E G + +Q +G+ +G +G + Sbjct: 218 SAPVGTTDFRALLTKIKAANPDAIYFGGVVAEAGLVRQQMAQLGMTQPMIGVDGFYDQEF 277 Query: 257 SNIAGDAAEGMLVTMPKRYDQDPANQGIVDALK-ADKKDPSGPYVWITYAAVQSLATALE 315 IAG AA G +V + K +P + +A K A+ +P G Y Y A + AL+ Sbjct: 278 IKIAGPAATGTIVGIAKEV-GNPKLDAMTEAYKGANFAEPVGSYTKNAYDATNIIIEALK 336 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADG 363 G+ + A+ K ++A + +G ++DE G K + DG Sbjct: 337 TAGTKDKAAIAKAIRAIDYDGAMGRTSFDENGQTKRAVVLELREVKDG 384 >UniRef50_Q2T506 Amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=24 Tax=Proteobacteria RepID=Q2T506_BURTA Length = 408 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 95/345 (27%), Positives = 161/345 (46%), Gaps = 4/345 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLV---GVEYDD 74 + + + + + ++GP+A+ G NGA+ A+ D N++ G K V V DD Sbjct: 21 TGRSAPQTVLIGLAAPLTGPLARIGKDLQNGAQLALDDANSRRPTLGGKPVVYRLVAVDD 80 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 DP+ AV VA ++V + V+GH + + PAS IY D GI I+P T + T++GY Sbjct: 81 QSDPRAAVTVAQRLVERRVIGVVGHWNTGCSVPASRIYRDAGIAQIAPALTGRQYTRQGY 140 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 R G D + G A Y+++T+ +RIA+I D+ +G GLA G+ A +V Sbjct: 141 PTAFRIVGHDDASGAHAGAYVVKTLGAKRIAVIDDRTAFGAGLADQFVKGVDANGGAIVD 200 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + DFSA++ +K + D V++GG + + R+ R + L +G G Sbjct: 201 RQYVNDKTADFSAVLTAIKAKRADVVFFGGLDAQAAPLARRMRQLTLNATLVGAGGFVTQ 260 Query: 255 SLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 + ++AG +G+ P + P +A + P + Y +L A Sbjct: 261 TFLSLAGPGGDGVTALEPGLPLARMPGGAAFDARYRARYRAPIELHAPFAYDEAATLIAA 320 Query: 314 LERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 ER S + L L A V G + +D +G+L+ F +++ Sbjct: 321 AERADSTDAARLPAVLHALKRQGVTGAIAFDAEGNLRNPAFTIYR 365 >UniRef50_D0D0C1 Extracellular ligand-binding receptor n=1 Tax=Citreicella sp. SE45 RepID=D0D0C1_9RHOB Length = 425 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 93/369 (25%), Positives = 163/369 (44%), Gaps = 16/369 (4%) Query: 2 KRNAKTIIAGMIALAISHTA-----MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 +R A +IAG ++ A ++K+ + +SGP A G G A+K+ Sbjct: 45 RRQALRLIAGATGATLATPAIIRAQTPSELKIGGMLPLSGPAAIEGHQVLKGLEFAVKEA 104 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDE 115 NA GG ++V + DD + + V K++ D + +++G S+ I ++ Sbjct: 105 NAAGGALDREIVLMVEDDEANTTRGVIAVRKLIETDKVPFIVGTYASAVVIATMQITKEY 164 Query: 116 GILMISPGATNPELT---QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ 172 G+ ++S G+T+ T + G R+ QG A I + +AIIHD Sbjct: 165 GVPLLSGGSTSVAATDANEPGNPWFFRSWPSSVDQGLDTANAITGRFGAKTVAIIHDSGS 224 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 YG L V+ +K ++ D AGE+DF+ L+ R++ E D VY GG+ + + Sbjct: 225 YGYSLGDQVEQVVKDNGGEILSRDTYNAGEQDFTTLLTRIRSEKPDAVYIGGWAGDGAMI 284 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGM-LVTMPKRYDQDPANQGIVDALKAD 291 +RQA VGL+TQF+G + + +AG A+EG + T+ + + +A+ Sbjct: 285 VRQATEVGLRTQFVGSGSMVSDDFIELAGPASEGFAVATLYEPSTPNVYGAEFGKRFEAE 344 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN--GANTVIGP----LNWDE 345 +G + + + A+ RTG + A+ + V GP +D Sbjct: 345 VGQAAGTLNSLGFDSTSIGIEAVRRTGGTDSKAVRDMIATGMADFPIVQGPEGATAAFDA 404 Query: 346 KGDLKGFDF 354 KG + +F Sbjct: 405 KGSVDFPNF 413 >UniRef50_A8TTJ6 Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTJ6_9PROT Length = 401 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 89/336 (26%), Positives = 165/336 (49%), Gaps = 3/336 (0%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 A+ I++ ++G A G NGA A++ INA GG+ G L V YDD Sbjct: 38 GPVTAAEPIRIGFNVPLTGFAAADGASAKNGAELAVEQINAAGGVGGRMLELVSYDDQAS 97 Query: 78 PKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 PK+ V +ANK++ D + I S+ T+ A+ I++ + IS A +P++T+ G + Sbjct: 98 PKEVVPIANKLIEQDKVTAAISGSYSAPTRAAASIFQSAKVPYISAYAIHPDITRAG-DY 156 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 + RT+ + QG AK + + +K +R+ +I + +G+ LA ++ VV Sbjct: 157 VFRTSFMGEVQGRAGAKLVGDILKKKRVVMITLQNDFGKSLADGFKEAAGTFGVEVVAEY 216 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 + ++ F ++ R+K + + +Y GY+ G ++ Q R+ G+ +G EG + Sbjct: 217 EYSIKDRQFGPIVTRVKADAPEVIYASGYFFTAGPLVSQLRAAGIDVPVIGQEGYDSQKF 276 Query: 257 SNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 IAG A+EG+++T D +DP + + A + P+ + AV+ LA AL Sbjct: 277 IEIAGAASEGVIITTSLDRDSKDPEARDFIAAFEKKAGYPADMVAASGHTAVKVLAAALG 336 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKG 351 GS +P A+ + + G ++++ G+++ Sbjct: 337 AAGSTDPQAIRDAIAKSHVKASTGTISFNGLGEVEK 372 >UniRef50_B5HG53 Extracellular ligand-binding receptor n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HG53_STRPR Length = 386 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 164/366 (44%), Gaps = 10/366 (2%) Query: 3 RNAKTIIAGMIALAISHT---AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 + A + G +AL + + +K+A G +SG G+ NG + AI NAK Sbjct: 8 KLAIPLAVGALALTGCGSDSGSGDGAVKIAFQGPLSGDNVALGENMQNGVKLAIDQANAK 67 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGIL 118 G + K+ V DD P +A A A KI++D G+ V+G S T +S +Y + G++ Sbjct: 68 GDLDF-KIEYVAGDDQGLPDKATATAQKIIDDPGVVAVVGPAFSGPTNTSSPLYAESGLV 126 Query: 119 MISPGATNPELT--QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 +SP ATNP LT + G+ +R D+ QG A Y + ++ +++ ++ DK YG G Sbjct: 127 TVSPSATNPLLTDKENGFTSFLRGVPNDNMQGAGMATYYAKKLQAKKVYLVDDKTDYGVG 186 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + GLK A VV + D+SA + D + Y GYY + ++ Sbjct: 187 LATVAEKGLKDAGIEVVKK-SVPQKTPDYSATAKDVVNSKADALIYAGYYQDAAPFAKKL 245 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ-DPANQGIVDALKADKKDP 295 + G K + +G + +AGDA+E +T P + + + + + Sbjct: 246 KDAGYKGAAISGDGTNDMKFVELAGDASENWFLTCPCTDATVEAGTKKFAEDYQKEFGRA 305 Query: 296 SGPYVWITYAAVQSLATALERTGSD-EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 G Y Y + +++ G+D E AL L + ++ E G+ KG D Sbjct: 306 PGTYSAEAYDIANMIIAEVKKAGADVEREALRDALAKASYKGLTKTFSFGENGEFKGTDV 365 Query: 355 GVFQWH 360 ++Q Sbjct: 366 YLYQVK 371 >UniRef50_C9LQP4 Putative branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQP4_9FIRM Length = 386 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 75/350 (21%), Positives = 144/350 (41%), Gaps = 12/350 (3%) Query: 9 IAGMIALAISHTAMADD----IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 AG+ A TA +K+ + A++G A +G + G R A+++IN KG I Sbjct: 20 AAGLTACGGIKTAADSPSKGGVKIGFIAALTGGAAAYGKSQEEGIRMAVEEINQKGAI-- 77 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 + D P A+ V +++ +IG + S+ + A I ++ I + Sbjct: 78 -PIELFVEDSKGSPSDAMNVTKRLIQKKAAVIIGPMTSNEAKAAGPIMQNAKIPSLEISV 136 Query: 125 TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQD 183 T +T+ G +I R + +S P AK + + AI++ + + + Sbjct: 137 TAEGITEIG-DYIFRNSVPESMNIPQTAKKTHRLLGYETAAILYAHDNEQHVTAQKYFRK 195 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 L+ +V + + + ++SA + ++ D V YY E ++L++ R +G+ Sbjct: 196 TLEEEGVKIVDVETFGSKDSEYSAQLTNIENAKPDVVIVCSYYQEGVRILKKMREMGMNQ 255 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN-QGIVDALKADKKDPSGPYVWI 302 +G G + L +AG AA+ + V+ +D A + V+ + Sbjct: 256 PVLGDNGFVSPELGKMAGAAADNVYVSSMWSAARDTAATKTFVENYTKKYGHAPDQFAAA 315 Query: 303 TYAAVQSLATALERTGS-DEPLALVKDLKAN-GANTVIGPLNWDEKGDLK 350 Y V A++R GS + + + G N V G ++D+K D Sbjct: 316 AYDGVYMAMDAVQRAGSVTDTRKIRDAMAEMKGFNGVCGTFSFDDKRDPV 365 >UniRef50_B1C374 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B1C374_9FIRM Length = 421 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 92/370 (24%), Positives = 155/370 (41%), Gaps = 24/370 (6%) Query: 1 MKRNA---------KTIIAGMIALAISHTAMADDI---KVAVVGAMSGPIAQWGDMEFNG 48 MKRN ++ + ++A + DI K+ +G +SG +Q+G N Sbjct: 36 MKRNLSKFKKVIATLSVASILVACGGGGGSATTDISEAKLGFIGPLSGDASQYGIAVKNA 95 Query: 49 ARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQP 107 AI + N + + V DD D + V NK+V +G+ +IG + S S Sbjct: 96 IELAINEYNDENDTN---ITAVYLDDKADATEGVNAYNKLVTEEGVNAIIGSVTSGSALA 152 Query: 108 ASDIYEDEGILMISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR 163 E +GI +++P + ++T Y+++ R DS G AK ++ Sbjct: 153 VVATAEADGIPILTPSGSADQITINDEGETYENVFRICTNDSYAGTFLAKKCNTDFNYKK 212 Query: 164 IAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYY 222 +AI+ + Y GL + + K N VVF + T KD+S I++LK E D ++ Sbjct: 213 VAILSNKDSDYSTGLRDAFVEEAKNQNVEVVFDETYTKDTKDYSTYISKLKNEEYDTIFL 272 Query: 223 GGYYPEMGQMLRQARSVGLKTQFMGPEGV-GNASLSNIAGDAAEGMLVTMPKR-YDQDPA 280 YY ++ +++Q R G+ T +G +G G +S + G+ G T D Sbjct: 273 PDYYEQVVTIVQQFRDAGINTPLLGADGWDGVLGVSGVDGNIFNGSYYTSGFDKNSSDEN 332 Query: 281 NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA-NTVIG 339 Q V K + Y AV + A+ER G+ E + + L N V G Sbjct: 333 VQRFVKNYTDKYKTEPNMFAAFAYDAVFVMMDAMERAGTTESSKVNEALADTNYKNGVAG 392 Query: 340 PLNWDEKGDL 349 +D+K + Sbjct: 393 AFKYDKKHNP 402 >UniRef50_B8IDJ0 Extracellular ligand-binding receptor n=4 Tax=Rhizobiales RepID=B8IDJ0_METNO Length = 388 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 85/351 (24%), Positives = 154/351 (43%), Gaps = 8/351 (2%) Query: 5 AKTIIAGMIALAISHTAMAD----DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 A +I M + +A A +++ +V ++GP A G NGA+ A++ +N G Sbjct: 13 ASAVIGSMAGPGLIRSACAQGAGSTVRIGMVLPVTGPGADAGRFALNGAKLALEAVNKAG 72 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILM 119 G+ G L V DD AV +K+ + + +G + S+ + G Sbjct: 73 GVLGKPLEIVTEDDQTTNPGAVLAFSKLASQSDLVGFLGSIRSTQNHAMAPDILKTGKP- 131 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 + G T+P LTQ G + R DS A + + T+ ++ A+IH +G A+ Sbjct: 132 VCFGGTDPVLTQMGNPWLFRFRPNDSYSARVIADFGINTLAKKKWAVIHSTDAFGTSGAK 191 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFV-YYGGYYPEMGQMLRQARS 238 ++ + L A+A+V G + +DF+ ++ +++ + + Y + ++G RQ R Sbjct: 192 ALTEALGKASASVALDQGYSNQSQDFTPVVLAIRQSGAEIIGSYFTFENDLGIFARQLRQ 251 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP 298 +G+ ++G + N + +AG + G D A + A +A K Sbjct: 252 LGVTVPWVGSPSITNVTALKLAGPSLYGTYGVADYAEDSSEAARAFGKAYRAATKIAPDN 311 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGD 348 TY AV LA A+ + G +P A+ + L + G G N+D+ GD Sbjct: 312 QSSWTYDAVTVLALAINKAGKTDPQAIREALLSVRGHEGAEGTYNFDKNGD 362 >UniRef50_C0QII0 LivK2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QII0_DESAH Length = 371 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 85/365 (23%), Positives = 153/365 (41%), Gaps = 8/365 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M + I +++ + A + V V ++G +A +G+ A ++INA G Sbjct: 1 MGKFTAGFI-CALSVFWAGAVFAGTVSVGAVTPLTGKLAVYGEGFQQAMLLAAEEINASG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GI GD L V D+ K +V+ K++ D + V G SS+ I + ++ Sbjct: 60 GINGDTLEIVFEDNNSTSKGSVSAIRKLITIDKLTLVFGPAASSNFLAICPIAQKNKTIL 119 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 I + E+T+ G ++ R D QG ++ + ++ + + + + +G GLA Sbjct: 120 IGAESAAAEITKCG-SYVFRVFPSDLLQGTGVSE-LASSLGYKEVVLTYVNNDWGVGLAE 177 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + A+ ++ G+ D+ + I R+K+ N V Y E +L+QA Sbjct: 178 VFKRQFLASGGKIIDELAHAEGKTDYRSEILRIKRHNPKVVVNLTYIKEGATILKQAYET 237 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADK-KDPSGP 298 GL TQ++ + L +AG AEG++ T P + P Q A + + Sbjct: 238 GLNTQWLMGSASKSPKLVALAGKTAEGIIGTYPTFSQESPEYQAFKTAWEKKYSGKKTPI 297 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKA--NGANTVIGPLNWDEKGDLKGFDFGV 356 + Y V+ A AL GS + + + L G G ++DE GD+ G +G Sbjct: 298 FGEYNYDMVKLTALALRDAGSVDADTVRESLLKVSQGYMGTTGDKSFDENGDV-GATYGR 356 Query: 357 FQWHA 361 + Sbjct: 357 WTVKD 361 >UniRef50_A9FT17 Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FT17_SORC5 Length = 398 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 88/388 (22%), Positives = 158/388 (40%), Gaps = 25/388 (6%) Query: 2 KRNAKTIIAGMIAL-----------------AISHTAMADDIKVAVVGAMSGPIAQWGDM 44 +R +IAG +AL A H + KV ++SG +G Sbjct: 4 RRGLVKMIAGALALSAMTLGCDKKSEGSAGNAAEHAKDDAEWKVGAYFSLSGEETAFGVD 63 Query: 45 EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSS 103 AI +IN GG+KG + + D+ P++A ++++ D + ++G + SS Sbjct: 64 SKEAIDLAIDEINKAGGVKGKPIHVLYEDNKSKPEEATNKVLQLIDRDHVLALLGEVASS 123 Query: 104 STQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR 163 ++ + + + MI+P +TNP++T+ G + R D QG A++I+ T+ ++ Sbjct: 124 RSRAGGIVANKKKVPMITPSSTNPDVTKVG-PFVFRACFTDDVQGQMGAQFIVNTLGKKK 182 Query: 164 IAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYY 222 + + Y GLA+ +D +K +V E +F+ I LK N + +Y Sbjct: 183 VGLFFASDDLYSSGLAKEFRDEVKRLGGEIVMEKSFLKKETNFTTYINELKSANPEMIYA 242 Query: 223 GGYYPEMGQMLRQARSVGLKT-QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPA 280 YY M + RQA++ G+ F+G +G L A + +G T D P Sbjct: 243 PIYYTSMAPVARQAKAAGVPGSMFVGSDGWDANELLRDAAEELDGAYFTNHYAPDVPWPN 302 Query: 281 NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIG 339 +Q V K Y A + LA A+ R + P + ++ G G Sbjct: 303 SQAFVKKYKDRYNRTPSSIAAQAYDAARLLADAMGRAKAMTPDDIRAAIQDTKGFQGATG 362 Query: 340 PLNWDEKGDLKGFDFGVFQWHADGSSTA 367 ++ D + + + + D T Sbjct: 363 VISIDAERN-ANKPVVIVRIK-DKQFTY 388 >UniRef50_A9KNN4 Extracellular ligand-binding receptor n=4 Tax=Firmicutes RepID=A9KNN4_CLOPH Length = 386 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 84/338 (24%), Positives = 160/338 (47%), Gaps = 6/338 (1%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 ++ A+ IK+AV G M+G A++G N A+ + N KGG+ G ++ V+YDD + Sbjct: 35 SSSAETIKIAVAGPMTGDNAEYGIGFTNAAKMMADEWNKKGGVLGKQIKIVQYDDKNSSE 94 Query: 80 QAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 +A +A KIV++G I VIGH S A+ IY++ ++ ISP A++P+ + G +I Sbjct: 95 EAATIAQKIVSEGDIAGVIGHFSSGVCLTAAPIYQENKLVEISPSASHPDYSLVG-DYIF 153 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANAN---VVFF 195 R + S++ + + + ++I II K +G ++ +++ ++ + +V Sbjct: 154 RNNTVISAEAAASIDIAVNDLGKKKIGIISIKTDWGTNTSKIIKELVEKLGIDGVSIVAH 213 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 + + G D+S I +L + D V G Y + + +Q + + + +G + Sbjct: 214 EEVVEGSDDYSPAITKLNQAGADVVICAGMYNLVAPVAKQYKQINPDIKVVGFSNSYSQQ 273 Query: 256 LSNIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 L + G A EG+ + +D + V A + + + Y +V L +A+ Sbjct: 274 LIELGGLAIEGVCFPVIFFSESKDEKIKNYVSAFEKEFGNKPSALTSQAYDSVGMLLSAI 333 Query: 315 ERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 E+ GS + A+ L V G +DE G++ Sbjct: 334 EKAGSTDKEAVRNALAEVDYEGVTGQTKFDENGNVNKQ 371 >UniRef50_B0PGR3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGR3_9FIRM Length = 411 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 90/335 (26%), Positives = 139/335 (41%), Gaps = 5/335 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 A +I + A++G G G A+++INA GG+ G KLV DD Sbjct: 55 GTAATDGEILFGLSCALTGNFPLAGQRTREGIDLALEEINANGGVLGKKLVYTIEDDQNT 114 Query: 78 PKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 AV V KI+ + VIG S + +++Y + G+ ++ G T+P+L + ++ Sbjct: 115 QTTAVNVVTKILTQDVAAVIGPHTSGNAMATNELYRNAGVPFLT-GGTSPKLEEAQNPYM 173 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 R D+ G AAKY +ET+ ++I I + +G G + L+ A V G Sbjct: 174 FRCRPADTINGQVAAKYAIETLGAKKIGISFNNNDFGTGGRDVIIAYLEEAGVPYVAV-G 232 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 AG+KD + I +LK E +D + E+ RQ +G+ + GV + Sbjct: 233 HNAGDKDLTGQIMQLKGEGVDCIISWTDDAEVALTARQLYELGVDVPVIASAGVVMDQVL 292 Query: 258 NIA-GDAAEGMLVTMPKRYDQDPAN-QGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 N+ + EG D A Y Y+A LA A+E Sbjct: 293 NLLEPEYVEGWYSVTDFVSTSDEAVTAEFTKKFTDKYGYAPELYAATYYSATYVLADAIE 352 Query: 316 RTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDL 349 R GS +P A+ L A G G DE G+L Sbjct: 353 RAGSADPQAVRDALAATDGLVLPEGSYKCDENGNL 387 >UniRef50_A0LIW6 Extracellular ligand-binding receptor n=5 Tax=Deltaproteobacteria RepID=A0LIW6_SYNFM Length = 385 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 90/380 (23%), Positives = 155/380 (40%), Gaps = 19/380 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAM--ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M K++ +I L + A + K+ + +++GP + GD E AI +INA Sbjct: 5 MSLIGKSLAVLLIGLLVVPAAAWCKEPYKIGGLFSVTGPSSFLGDPEKKSLELAIDEINA 64 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKI-VNDGIKYVIGHLCSSSTQPASDIYEDEGI 117 +GGI G L V YD DP + A+K+ D + +IG + +T + E + + Sbjct: 65 RGGIDGHLLEAVIYDTEGDPGKTNLNASKLMTKDNVIAIIGPSLTPTTLAIVPLAEKQPV 124 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 +IS A +T+ + +TA D ++ + +++ II + YGE Sbjct: 125 PLIS-CAAGILITEPVKPWVFKTAQSDVLAVAAIYGHM-QKKNIKKVGIITVESAYGESG 182 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 + VV + A + D +A + +++ + V G P + R + Sbjct: 183 RDQLTAQAPKFGIQVVQAETFGAKDTDMTAQLTKVRSAQPEAVICWGTNPGPAVIARNFQ 242 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAE------GMLVTMPKRYDQDPAN---QGIVDAL 288 +G K GV + +AG+AAE G ++ + D DP + V+ Sbjct: 243 QMGFKIPLYQSHGVASPKFVELAGEAAENIVLPAGKILVTDQLPDSDPQKAVLKRYVEQF 302 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERT-GSDEPLALVKDLKAN-GANTVIGPLNWDEK 346 K P P+ Y A+ LA ALE T G + A+ K ++ G V G N+ + Sbjct: 303 TGRFKQPVSPFGGYAYDAMMILAKALEGTEGKKD--AVRKRIEEVRGLVGVTGTFNFSPQ 360 Query: 347 -GDLKGFDFGVFQWHADGSS 365 + G D V +G Sbjct: 361 DHNGLGPDAFVMVQIQNGKF 380 >UniRef50_A9BJ64 Extracellular ligand-binding receptor n=2 Tax=Thermotogaceae RepID=A9BJ64_PETMO Length = 376 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 87/351 (24%), Positives = 157/351 (44%), Gaps = 17/351 (4%) Query: 4 NAKTIIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIK---DINAK 59 KT++ + + ++ T + IK+ + ++GP++ +G M +G A K +N Sbjct: 1 MRKTVVLVFLVVIMTFTLFGQEVIKIGMNFELTGPVSGYGQMSRDGVMLANKLKPTVN-- 58 Query: 60 GGIKGD--KLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEG 116 I G K+ V D+ D ++ ++++ + + VIG SS+ A+ I E+ Sbjct: 59 --IGGKEIKVEVVAVDNKSDKAESANAIRRLIDHEKVVAVIGPATSSAALAAASIAEERQ 116 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGE 175 I M+ ATNP L + +++ RT D+ QG A + E + Q +AI+ D Q Y Sbjct: 117 IPMVVNTATNP-LVAQNKKYVFRTCFEDTLQGALLATFAWEELGAQNVAIMVDVAQDYVV 175 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GLA + + F + T G++DF+A + +N D ++ GYY E+ + +Q Sbjct: 176 GLANYFEKAFEQFGGTY-FTEFYTTGDQDFTAQLTDALSKNPDAIFMPGYYAEIALISKQ 234 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ--DPANQGIVDALKADKK 293 AR +G +G L I G+ EG+ T D PA + V+A + + Sbjct: 235 ARDLGFTGPMFAGDGADAPELIQIGGEYVEGLSYTTYFHEDAELSPATKPFVEAYQEEYN 294 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNW 343 + + + Y A + A+E S +P+ + L V G + + Sbjct: 295 RRADAFGALAYDAYMVIVNAIESAQSTDPVKIRDALAQTRDFPGVAGTITY 345 >UniRef50_C4XNN1 Putative ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNN1_DESMR Length = 391 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 95/371 (25%), Positives = 164/371 (44%), Gaps = 16/371 (4%) Query: 1 MKRNAKTIIAGMIA--------LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 M R+A I +A LA + + + +AV+ A SG + G A Sbjct: 1 MHRSALLGIGLFLAMVMLLIPVLAGPAKSGSTAVHLAVIAATSGMASVHNQASLRGLYLA 60 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIY 112 IN++GG G L D+ + A + V G+ V+G + SS + A+ + Sbjct: 61 AAKINSRGGCLGSPLELTVLDNQSTSLGSRRAAQEAVRLGVAAVLGPIWSSHSLAAAPVL 120 Query: 113 EDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH-DKQ 171 + GI MI+P +TN +TQ G HI RT D QG A++ E + A++ + Sbjct: 121 QAAGIPMITPLSTNTRVTQVG-DHIFRTCFTDDFQGRVMARFARERLNAATCAVLASADE 179 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 Y +GLA+ + AA VV+ A DF+ +A++++ + + ++ GY ++G Sbjct: 180 DYSQGLAKVFAEEFMAAGGKVVYTADYRAKSLDFTPQLAQVQRLDPNVIFVPGYGLDVGL 239 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIV--DALK 289 ++RQARS+G+ T F+G + + +I G EG + D + V D L+ Sbjct: 240 IIRQARSLGINTVFLGGDAWSDLYDHDIQG--LEGNYYSTFWHPDLPVSGNASVRQDFLE 297 Query: 290 ADKKDPSGPY-VWITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIGPLNWDEKG 347 A + Y A+ + A+ER GS +P + + L + V G + +D Sbjct: 298 ASGSHLRDSMDTAMAYDALLLVVEAIERAGSTQPALIRQALADTSSFVGVTGSIAFDASR 357 Query: 348 DLKGFDFGVFQ 358 + G + + Sbjct: 358 NPVGRGAVILK 368 >UniRef50_C0D1T2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D1T2_9CLOT Length = 407 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 77/336 (22%), Positives = 148/336 (44%), Gaps = 5/336 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 + + + I++ V ++G A++G + A + +NA GG+KG + V D D Sbjct: 48 AGESGENPIRIGVAAPITGNSAEYGKGFQVATQMAAEVVNAAGGVKGRPIEMVVKDSKGD 107 Query: 78 PKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 K++ VA + I VIG SSS ++ IY+++G++ ISP A++P+ + G + Sbjct: 108 AKESADVARIFCEEEDIVAVIGDFSSSSCMASAPIYQEKGLVQISPSASHPDFAKMG-DY 166 Query: 137 IMRTAGLDSSQGPTAAKYILET-VKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 + G +GP AKY+ + + + + +I +G + + + + + V Sbjct: 167 MFGVVGRQDDEGPFMAKYMAKKYIGAESVGVIFMNNDWGVVTSENFKQACEESGVTVTAT 226 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 + GEKDF+A+I+++++ + D + Y E + +Q + G Q MG + + Sbjct: 227 ESFIEGEKDFNAVISKVRQTDPDALCLITQYNEAAIISKQVKQAGWDVQIMGAGAMYSDQ 286 Query: 256 LSNIAGDAAEGMLVTMPKRYDQ-DPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 L + G EG++ P ++ DP + Y +A A+ Sbjct: 287 LIQLGGADVEGLIAESPFIIEESDPKAMEFAREFEKRAGFKPNIQAASAYDTALLVADAI 346 Query: 315 ERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDL 349 R A+ L A + GP+ + E GD+ Sbjct: 347 GRAEEVSRSAVRDALAATDNFMGITGPITFTEDGDV 382 >UniRef50_Q03M75 ABC-type branched-chain amino acid transport system, periplasmic component n=55 Tax=Lactobacillales RepID=Q03M75_STRTD Length = 391 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 79/347 (22%), Positives = 151/347 (43%), Gaps = 14/347 (4%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 T + D IK+ V ++G +A +G E NG + A+ +IN GG+ G K+ V D+ + Sbjct: 33 GTKIGDTIKIGVNMELTGAVAAYGKSEQNGIKLAVDEINKAGGVDGKKIELVTKDNKSEN 92 Query: 79 KQAVAVANKI-VNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY--- 134 +A + + + + ++G S + AS + + G+ +I+P T +LT Sbjct: 93 AEASTSSTNLAIQSNVNAIVGPSTSGAVAAASLVSQKTGVPLITPSGTQDDLTVDANGVK 152 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVV 193 + + RT DS QG A Y + +++ + +D Y +G+A + K +V Sbjct: 153 KFVFRTTFKDSYQGEVLAAYSYNNLNAKKVVLYYDNASDYAKGIADEFKRKYK---GQIV 209 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 T+G+KD+ + + + K ++ D V GYY E G + +QAR +G+ +GP+G + Sbjct: 210 TEATFTSGDKDYQSALTKFKDQDYDAVVMPGYYTETGIITKQARDLGIDKPILGPDGFSD 269 Query: 254 ASLSNIAG-DAAEGMLVTMPKRYD--QDPANQGIVDALKADKKDPSGPYVWITYAAVQSL 310 + +AG A + + G + A + K + + Y +V + Sbjct: 270 EKFTELAGKKNASNVYYVSGYSTNVALSDKASGFIKAYEKAYKIEPNMFAALAYDSVYMV 329 Query: 311 ATALERTGSDEPLALVKDLK-ANGANTVIGPLNWDEKGDLKGFDFGV 356 A A + + + + +L V G + D+ + V Sbjct: 330 AEASKGAKTS--VDIADNLANLKNFVGVTGKMTIDKDHNPIKAALMV 374 >UniRef50_D2Q320 Extracellular ligand-binding receptor n=19 Tax=Actinomycetales RepID=D2Q320_9ACTO Length = 409 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 107/395 (27%), Positives = 170/395 (43%), Gaps = 29/395 (7%) Query: 3 RNAKTIIAGMIALAISHTAMAD-----------DIKVAVVGAMSGPIAQWGDMEFNGARQ 51 R ++I +AL + D K+ V+ +SG ++ G + Sbjct: 8 RVGASLIVASLALTACGSRSDDNGGGGSGEATKTAKIGVIAPLSGDLSALGLGIQHSVEL 67 Query: 52 AIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASD 110 A+K N I G KL DD P A + +D + V+G L +S +Q Sbjct: 68 AVKQANDSNAIPGWKLEVAAKDDEAKPDVGKNAATALSSDKDVIGVVGTLNTSVSQQVQP 127 Query: 111 IYEDEGILMISPGATNPELTQ---------RGYQHIMRTAGLDSSQGPTAAKYILETVKP 161 + + I+ +SP T P LTQ R Y RT D+ QGP AA+Y+ ET K Sbjct: 128 VLAPKNIVQVSPANTGPGLTQGANWQKDPKRPYPTYFRTCTTDAVQGPFAARYLYETAKI 187 Query: 162 QRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVY 221 ++A IHDK+ YG+GL + + K VV + I + +F A+++ +K VY Sbjct: 188 TKVATIHDKKAYGQGLVGTFTEEFKKLGGQVVAAETINPDDANFQAVVSAVKPSAPQAVY 247 Query: 222 YGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTM-PKRYDQDPA 280 YGG YP+ G + +Q ++ GL MG +G+ + +AG A G L T D + Sbjct: 248 YGGEYPQAGPLSQQMKAAGLNVPLMGGDGIFDPKYVQLAGKTAPGDLATSVGAPVDSLAS 307 Query: 281 NQGIVDALKADK-KDPSGPYVWITYAAVQSLATALER----TGSDE--PLALVKDLKANG 333 + V+ A+K +P Y +Y A ++ AL+ E A V+ L Sbjct: 308 AKKFVEDYNAEKFAEPYAAYGGYSYDAANAIINALKTSLKDANDVESARAATVEALGKVS 367 Query: 334 ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 + V G + +D+ GD V++ A +T Sbjct: 368 FDGVTGKVAFDQYGDTTSKVLTVYKVDAGKWATVE 402 >UniRef50_A8SAA0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAA0_9FIRM Length = 403 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 85/343 (24%), Positives = 144/343 (41%), Gaps = 19/343 (5%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IKV V+G ++G + +G NGA +K +NA GG+ G +L + D+ D QAV Sbjct: 49 IKVGVMGPLTGDASVYGQAVVNGANLYMKQVNADGGVNGKQLEIIAMDEQGDETQAVTCF 108 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL-----TQRGYQHIMRT 140 K+V+ GI ++G + ++ T + D + M++ AT + T ++ R Sbjct: 109 TKMVDQGITALVGDVTTAPTLAVAAESADYNMPMVTASATAEAVTYDAETDTVNGNVFRA 168 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDGIT 199 D QG A Y E + + A+I K Y EGLA + +A VV + + Sbjct: 169 CFTDPFQGVKMADYAYEKLGYTKAAVIFLKGKDYNEGLAENFAKEFEAKGGTVVDQESYS 228 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+ DF + + +N + V+ YY E+GQ+L QA S+GL F+G +G Sbjct: 229 EGDVDFKTQLTSILGKNPEMVFCPNYYQEVGQILAQAESIGLTVPFLGGDGWDGLEGYAT 288 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKD-PSGPYVWITYAAVQSLATALER-- 316 A + + DA KA+ + + + Y A ++ ++ Sbjct: 289 ADQLKDSYFCACYAKGSST----AFEDAYKAEYGEAYPNGFAPLGYDAAMTVVYGIKAAE 344 Query: 317 -----TGSDE-PLALVKDLKANGANTVIGPLNWDEKGDLKGFD 353 GSDE A++ + + G +DE + Sbjct: 345 EQGLEAGSDEYKQAVIDAIAGGTIEGITGTFTFDEHHNPVKST 387 >UniRef50_C4XSR4 ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSR4_DESMR Length = 415 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 86/356 (24%), Positives = 141/356 (39%), Gaps = 22/356 (6%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK---GDKLVGVEYDDACDPKQ 80 +K+ V +SGP A G AI++INA GGIK G KL V D DP Sbjct: 32 KTVKIGNVEPLSGPSASVGVQGKQAREMAIEEINAAGGIKSLGGAKLELVYADSKSDPTV 91 Query: 81 AVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 V +++N + + + G S+ T PA+ + E GI + P A +T+RG++++ R Sbjct: 92 GVTETERLINTEKVNLMTGCWNSAVTYPATQVAERYGIPFVVPVAVRDTITERGFKNVFR 151 Query: 140 TAGLDSSQGPTAAKYILET-----VKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 A DS +++ + VK Q+IA + + +G G A ++ K VV Sbjct: 152 IAAKDSWWVRDQFRFLKDMQEETGVKLQKIAFVFENGDWGTGFAEKWRELAKKDGYEVVL 211 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM--GPEGVG 252 + + D + ++ +LK D V + + + +K + + G Sbjct: 212 DEPYPSTATDLTPVVTKLKAAKPDIVMLVSNAADAILLTNTMAEMQVKPKVVLASGGGHA 271 Query: 253 NASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 + A G+ + D + PA + + K Y A+ +A Sbjct: 272 DPKFLENTDTNALGIFDEVEWNTDVNKPAAKPANEKFKKKYGYDLTGESVDAYVAMYVIA 331 Query: 312 TALERTGSDEPLALVKDLKANGANTVIGP--------LNWDEKGDLKGFDFGVFQW 359 ALER S EP + L A N GP + +DE G K + Q Sbjct: 332 DALERAASTEPAKIRDALAAT--NLTTGPGMVVSYDGVQFDETGQNKNAGIVIVQV 385 >UniRef50_B1LX36 Extracellular ligand-binding receptor n=11 Tax=Alphaproteobacteria RepID=B1LX36_METRJ Length = 378 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 122/366 (33%), Positives = 185/366 (50%), Gaps = 3/366 (0%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R A ++ +AL + A AD + + V SGP G+ G A +D NA GG+ Sbjct: 14 RPALIALSLCLALLPASRAAADVV-IGVAVPRSGPYVAVGEQVLRGVEAAARDANAMGGL 72 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G + DDACD A+AVAN V ++ V+GH+CS+++ ASDIY G++MI+ Sbjct: 73 DGQPVTLDVQDDACDSNTAMAVANHFVRSNVRLVVGHVCSNASIAASDIYAQNGVVMITA 132 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 + LT RG +I R G D Q +A + E + ++IA+I D+ LA + + Sbjct: 133 ASVAARLTDRGLPNIFRVCGRDDDQARLSAAVLAERFRDRKIALIQDQTPAARSLAAATK 192 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 D L N F + + D +AL RLK I+ VYYGG EMG++++ A G + Sbjct: 193 DNLNRIGVNEALFLSFSPSDADDAALADRLKSAGIEVVYYGGDAAEMGRLVKIAADRGFR 252 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWI 302 Q+ G + + IAG A+ G+L+T + PA +V A KA+ DP+G Sbjct: 253 PQWFGTSAIATPDFAKIAGSASNGVLMTFYLDPSRQPAAAAVVKAFKAEGVDPTGS-TIY 311 Query: 303 TYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 YAA+Q+L A S EP + + L + V+G + +D KGD+ + ++ W D Sbjct: 312 GYAAMQALVAAGNFAHSTEPRPIAQALHTERFDLVLGTVGFDAKGDVTAQGYVLYVWK-D 370 Query: 363 GSSTAA 368 GS T A Sbjct: 371 GSFTPA 376 >UniRef50_C0Z9I1 ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9I1_BREBN Length = 376 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 86/366 (23%), Positives = 154/366 (42%), Gaps = 12/366 (3%) Query: 9 IAGMIALAISHTAMADDI--KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGD- 65 AG + + +I K+ VVG +SG A +G+ + G A+ ++N KG Sbjct: 14 AAGEGGSGQAASTDGQEIQAKLGVVGFLSGSGAAYGEAQKAGLELALGEVNEAN--KGKL 71 Query: 66 KLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 K+ D A + + A+ NK++N D + +IG S A + + + Sbjct: 72 KIELKFEDSAGEKEGAINAVNKLINQDNVVAIIGPTLSGEMFAAGPVANEAETPIFGISN 131 Query: 125 TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQD 183 T+ + G +++ R + +S PTA K +E +++A+IH + + ++ Sbjct: 132 TSEGINDIG-EYVFRNSLPESIAIPTAMKAAVEKNGLKKVALIHASNDDFSVNGYKVMKA 190 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 + + G+ DFSA + +LK+ N D + Y E ++++AR +G Sbjct: 191 TAEKLGLEITGEATFANGDVDFSAQLTKLKQTNPDALLVSALYKEGSMVVKKARELGFTR 250 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWI 302 +G G N + IAG AAEG++V P + +D Q V A +A + Sbjct: 251 TILGGNGFNNPKVFEIAGPAAEGLIVATPFSPEKKDDKVQAFVKAFEAKYNKKPDQFAAQ 310 Query: 303 TYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 Y ++ ++ +L G + AL L V G L++DEK + G V Sbjct: 311 AYDSLYIMSQSLLAAGKADREALRGQLAQLKDFTGVSGKLSFDEKRNPIGDAVVV--VAK 368 Query: 362 DGSSTA 367 +G Sbjct: 369 EGKFVP 374 >UniRef50_A8UX91 ABC transporter substrate-binding protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UX91_9AQUI Length = 368 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 145/358 (40%), Gaps = 14/358 (3%) Query: 1 MKRNAKTIIAGMIALAISHT--AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M++ + I L + +K+ V+ ++GP A WG GA A++++ Sbjct: 1 MRKERLLTVLLFIFLFLISCEKQSEQTLKIGVLTPLTGPGALWGKNTLKGAELAVEELRK 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 +G + V D P + V K++ D I ++I SS +I + + Sbjct: 61 QGA----NIKLVVEDSKGSPLEGVKALQKMITLDRIDFLIDDAVSSVALAIVNILTQKKL 116 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 + +S G+TNP+L+ + R D+ + AKY L + +I+ + YGEGL Sbjct: 117 VCLSTGSTNPKLSGAS-PYFFRLWNSDAEEASVIAKYALRR-GFRAAYVIYIRNDYGEGL 174 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKK---ENIDFVYYGGYYPEMGQMLR 234 AR ++ ++ + G +F I+++K N F+Y GY E+ ++ Sbjct: 175 ARKFREVFVKNGGEILLENSFAPGTSNFQYFISKIKNVHKANKSFIYIIGYPREIPSLIV 234 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKD 294 Q R ++ G ++S+ AG EG++ PK + + + Sbjct: 235 QIRKSNVQIPIFGTAAFEDSSILARAGKYMEGVIYPYPKVVVT-AKREHFEKVYEKKYGE 293 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 G Y AV L A ++ G + + + L G +++DE GD+ Sbjct: 294 KPGSPAAEAYDAVYILYKAYKKVG-TDADKVREFLLNLRYEGASGYIDFDEFGDVHKP 350 >UniRef50_C7H459 High affinity branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H459_9FIRM Length = 407 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 19/345 (5%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ V+G ++G ++ +G NGA +K +NA GGI G ++ + D+ D QAV Sbjct: 51 DTIKIGVMGPLTGNVSVYGQAVVNGASLYLKQVNADGGINGKQIEILTEDEQGDATQAVN 110 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL-----TQRGYQHIM 138 K+V++GI ++G + ++ T + D + M++ AT + T +++ Sbjct: 111 CFTKMVDEGITALVGDVTTTPTLAVAAESADYNMPMVTASATAEAVTYDAETDTVNENVF 170 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDG 197 R D QG A Y + + + A+I K Y EGLA + + ++ +V + Sbjct: 171 RATFTDPFQGIKMADYAYQKLGYTKAAVIFKKGADYNEGLAENFVNEFESLGGTIVDQES 230 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 + G+ DF + + + + V+ YY E+GQ+L QA SVGL F+G +G Sbjct: 231 YSEGDVDFKTQLTSILGKGPETVFCPNYYEEVGQILSQAESVGLNVPFLGGDGWDGLEGY 290 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKK-DPSGPYVWITYAAVQSLATALER 316 A D + P DA KA+ D + + Y A +++ ++ Sbjct: 291 ATA-DQLKDSYFCANYAKGSSP---EFEDAYKAEYGEDYPNGFAPLGYDAAKTVVYGVQA 346 Query: 317 -------TGSDE-PLALVKDLKANGANTVIGPLNWDEKGDLKGFD 353 G+DE A+ + + + G +DE D Sbjct: 347 AEDAGLEAGTDEYKQAVNDAIASGTIEGITGTFTFDEHHDPVKKT 391 >UniRef50_B8FK55 Extracellular ligand-binding receptor n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK55_DESAA Length = 377 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 82/346 (23%), Positives = 154/346 (44%), Gaps = 8/346 (2%) Query: 10 AGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVG 69 AG +L I+ T D +K+A + A +G A F R + IN +GG+ G + Sbjct: 18 AGRTSLGIAQTG--DSVKIAAIFAQTGAAAPMDKEAFEALRWTCQRINHQGGVLGKPVEV 75 Query: 70 VEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL 129 +EYD+ ++A K + DG V+G S+ + + + ++ I MISP +TNP L Sbjct: 76 LEYDNQSTSLGSLAAGKKAIRDGATAVVGASWSAHSLAIAHLMQEAKIPMISPASTNPAL 135 Query: 130 TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAA 188 T+ G +I R D G A + E + + + ++ + Q+ LA D Sbjct: 136 TKIG-DYIFRVCASDEFSGKALADFASERLNAKTVVVLTNANSQFSRDLAAFFIDQFNKK 194 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 V++ DFS ++ ++K + V+ GY + G +LRQA+++G+K+ F+G Sbjct: 195 G-TVLWEGDYLQDASDFSQILEKVKSLQPEVVFVPGYPRDSGYILRQAQNMGVKSIFLGA 253 Query: 249 EGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAV 307 +G ++ AG A G + +P ++ ++ D + Y ++ Sbjct: 254 DGWNY-LMTEYAGSAVNGHYFSDLWHAGLPNPKSKAFLEEYNKDGFQVKISLAPLAYDSL 312 Query: 308 QSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGF 352 + A+ + G+ A+ + A V G +++++ GD Sbjct: 313 MVIVNAINKAGTLNTAAIRDAIAATKDYEGVTGNISFNQFGDPIKP 358 >UniRef50_C8WA26 Extracellular ligand-binding receptor n=2 Tax=Atopobium RepID=C8WA26_ATOPD Length = 393 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 88/363 (24%), Positives = 151/363 (41%), Gaps = 17/363 (4%) Query: 9 IAGMIALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 IAG ALA D I V V+G +G +AQ+G +G +K+ N KGG+ G + Sbjct: 17 IAGSFALAGCSPKNQDPNSIYVGVMGPFTGDVAQYGLAVRSGVLLYLKEFNKKGGVNGRQ 76 Query: 67 LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATN 126 +V V D+ D +A+ V NK++++ + ++G + S+ T + + I ++ AT Sbjct: 77 IVPVVEDEKGDSTEAILVYNKLLDENVCAILGDVTSTPTIALAQKSVLDNIPCVTASATA 136 Query: 127 PELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIA-IIHDKQQYGEGLARSVQDGL 185 ++ G ++ R D QG A++ + QR+ I + Y G+ + Sbjct: 137 EDVVTHGN-NMFRATVTDPFQGVVLAEFAKKQ-GYQRVGTIFNSGGDYEIGVNNAFVQKA 194 Query: 186 KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQF 245 + VV G G DF+A + + + D + YY + G+++ QAR +G K F Sbjct: 195 RELGIEVVSQQGYPTGAVDFNAQLTSIIGLDPDVILAPNYYQDNGKIVTQARQLGCKKPF 254 Query: 246 MGPEGV----GNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVW 301 MG +G G A D + + D Q V A + + + Sbjct: 255 MGADGWAGIIGGEQDYASATDLEGCFYCSAFVASNPDEKVQHFVTAYTEEYGEAPTNFCS 314 Query: 302 ITYAAVQSLATALERT-------GSDE-PLALVKDLKANGANTVIGPLNWDEKGDLKGFD 353 + Y A L +ALE SD A++ + + V G L++ GD Sbjct: 315 LGYDAAMILCSALEVVEKHGYTYNSDAYRQAIIDAIASGVVEGVTGALSYQGTGDPVKST 374 Query: 354 FGV 356 + Sbjct: 375 LII 377 >UniRef50_C0ZKD9 Probable branched-chain amino acid ABC transporter substrate binding protein n=2 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZKD9_BREBN Length = 409 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 9/348 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IK+A +SG + GD GA A++ + G L DD DPK V+ A Sbjct: 55 IKIATQSPLSGSNSAIGDAIKTGAGYALEKRKEEFKALGFDLQLFPQDDQGDPKIGVSNA 114 Query: 86 NKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 +++D + V+GH + P+S Y++ ++M+SP T +LT+ G + + R D Sbjct: 115 EMLISDPDVYGVVGHYNTGVAIPSSVKYDEGKLVMVSPANTGVKLTEEGKKTVHRICARD 174 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 +QGP AA Y T+ + IIHDK YG+GL+ V+ + ++ F+GIT GEKD Sbjct: 175 DAQGPKAALYAKTTLGVKTAYIIHDKTAYGQGLSDQVKMQFEKDGVQILGFEGITQGEKD 234 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA 264 +SA++ ++ +N D +++GG YPE G +++QAR G K FMG +G+ ++ + IAG+A Sbjct: 235 YSAVLNQVTVKNPDIIFFGGLYPEGGILIKQAREKGFKGYFMGGDGLDSSDMIKIAGNAV 294 Query: 265 EGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSL----ATALERTGS 319 EG++ T Q + + K P Y + ++ + A + G Sbjct: 295 EGVVFTSVAGDVTQTEEGKKWAEEYKKATNKPLETYSVYGFDSMNVILNGVLEAAKANGG 354 Query: 320 DEP--LALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGS 364 +P ++ + + +DEKGD D ++++ D S Sbjct: 355 KKPTREQVLDAVHKTKDFQGQFTKVTFDEKGDNTNADVFIYKFAKDKS 402 >UniRef50_A8R9T6 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R9T6_9FIRM Length = 396 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 8/340 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + I++ + ++G +A +G E+NGA+ AIK N K K VE D+ ++A A Sbjct: 41 NTIRIGMNFELTGNVANYGTTEYNGAKLAIKQANENSEHKF-KYEIVEGDNKSAAEEATA 99 Query: 84 VANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT---QRGYQHIMR 139 +A K+ +DG+ ++G S ++ + D +L++SP AT T + Y ++ R Sbjct: 100 LATKLATSDGVDGMVGPATSGNSLATYQVANDSKVLVVSPSATANGATMNNGKVYDYVYR 159 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFDGI 198 D++QG + + + ++ A++ D Y +G+A+S + K +V Sbjct: 160 VCFEDNTQGAAMGVFAYDNLGKRKAAMLSDSSNDYAKGMAKSFKKKFKEKGGEIVTELNY 219 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 + DF+ + ++K + D +Y GYY E+G +++QARS+G+ +G +G ++ L Sbjct: 220 AEKDTDFNVQLTKIKDMDFDVLYIPGYYNEVGLIIKQARSLGIDVPIIGGDGFDSSDLVK 279 Query: 259 IAGD--AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 +AG + T + ++A K + + + + Y A + A E+ Sbjct: 280 LAGAENLNDVYFTTAYTTVNASDELTAFIEAYKEEYGEEPSMFSALAYDATNVMIEAYEK 339 Query: 317 TGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGV 356 G + A + L + N V G +D+ V Sbjct: 340 AGKKDMDAAKEALDSMKFNGVTGSFTFDKTHTPTKDVLVV 379 >UniRef50_A1SHR8 Extracellular ligand-binding receptor n=1 Tax=Nocardioides sp. JS614 RepID=A1SHR8_NOCSJ Length = 394 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 91/336 (27%), Positives = 154/336 (45%), Gaps = 11/336 (3%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI-----KGDKLVGVEYDDACDPK 79 I VAV G M+G +G + +G + A K+IN GGI KG K+ V++DD DP Sbjct: 37 TITVAVAGPMTGDNGIYGQDQLSGVQFAAKEINDSGGIPDGPLKGKKIKVVKFDDVADPN 96 Query: 80 QAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 Q +VA KI +D I V GH SS T A IYE G+ + ++NPE+T ++++ Sbjct: 97 QGASVAQKICDDTSIMAVFGHSNSSVTLAAEPIYERCGVPLFVSYSSNPEITAELHENLF 156 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 RT D+ G A + + + +++ +I YG+GL + + +V Sbjct: 157 RTLIDDAKMGSEMASFSHDQLGFKKVGVIASDDDYGDGLKTNFNKTAEEIGLDVAKTVTT 216 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 +A +KDF+ + L+ D + Y + ++QA ++G G + L Sbjct: 217 SAKQKDFTPQLTELRNAGADSLVLLNTYTDAALQIKQADAMGWDVPIFVTPGSNSPELVK 276 Query: 259 IAGD-AAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 IAG+ AAEG +V + P V+ A G ++Y + T+LE+ Sbjct: 277 IAGEKAAEGTIVAAVFDPNSSEPGPAKFVNDFTAANGKGPGESAAMSYDSFYVFLTSLEK 336 Query: 317 TGSDEPLALVKDLKANGANT--VIGPLNWDEKGDLK 350 G+ + ++++ G T + G L ++E + Sbjct: 337 -GAKDRKSVIEKSAEIGTFTLPIRGELMFNETHEPT 371 >UniRef50_C5EN81 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN81_9FIRM Length = 415 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 122/328 (37%), Gaps = 4/328 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 + A + I + V G+++G G GA+ A +IN GG+ G ++ DD Sbjct: 58 AEGASGETILIGVSGSITGAAPINGLRTKQGAQMAADEINEAGGVLGRQIELFVADDGGA 117 Query: 78 PKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 A+ AN I++ + +G S + + M++ + +T ++ Sbjct: 118 QDTAINAANLIISQDVVAQVGPNLSGMALAVEGLLSQAKVPMLTGATSPKLVTTIDNPYL 177 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 R D+ Q AA Y + + +++ + + YG G +Q+ L V + Sbjct: 178 FRIRAADTVQAKLAATYATQNLGCRKLGLFTNSNDYGSGALNVIQEYLDGIGTAYVA-EA 236 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 G+ D ++ I +LK +D V E RQ +GL +G + +S Sbjct: 237 HNTGDTDMTSQILKLKDAGVDGVIIWTDDAETALAARQFHDLGLDVPIIGSPSISTPQVS 296 Query: 258 NIAGDAA--EGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 + VT + V +A + Y Y ++ L A+E Sbjct: 297 GLCQPQWLDNWYCVTDFTASNTSDHVTKFVKDFEAKYNETPELYAATYYGSIYILKDAIE 356 Query: 316 RTGSDEPLALVKDLKANG-ANTVIGPLN 342 R G+ E AL+K L V+G Sbjct: 357 RAGTTESDALLKALNETDNLQGVVGKYK 384 >UniRef50_B8DRY9 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRY9_DESVM Length = 394 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 153/340 (45%), Gaps = 4/340 (1%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 TA+A D+ ++V ++G A++G++ A ++INAKGG+KG KLV D P Sbjct: 18 ATALAADLSLSVPLPLTGGQAKFGEIIKKSMEIAAEEINAKGGVKGGKLVLRFEDSQGKP 77 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 + A ++A KI++ + G S+ + + + E+ + + E+TQ+ Y+++ Sbjct: 78 EIARSIAEKIIDVQKQPLLFGEYTSACAKAVAAVAEERKTPYVVVASAADEITQQNYKYV 137 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 R ++ ++ + VKP+ + I+++ +G A + + A V+ + Sbjct: 138 YRINPTNAYYASGLLSFMDKVVKPKTMVILYESSDFGTSGAEEMAKSAEKAGIKVLMKEK 197 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM--GPEGVGNAS 255 G DF +++++K +N D +Y Y + ++RQ + + + + G G Sbjct: 198 YEKGAVDFKPVLSQVKAQNPDVIYMVSYVMDAALLMRQIKELRIDARLFAGGAAGFAIPE 257 Query: 256 LSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 + A DAAE ++ P + + KA D + + Y++V + A+ Sbjct: 258 FIDNAKDAAEFVVTATLWSPQVSYPGAREFAEKYKAAHGDYPSYHGALAYSSVYVVKDAV 317 Query: 315 ERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 ER + + +K T GP+ ++ + + +F Sbjct: 318 ERAKALTTEDINAAMKGVDMMTAFGPVKFESRDGYQNQNF 357 >UniRef50_A7HAB6 Extracellular ligand-binding receptor n=8 Tax=Bacteria RepID=A7HAB6_ANADF Length = 402 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 147/351 (41%), Gaps = 10/351 (2%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A +K+ + +++GP A G+ NG A++D+ K G + ++ DD P+ Sbjct: 39 AGQAQVKIGFINSITGPEAPIGENLTNGVDMAVEDLKKK----GVNVQLIKQDDTGKPQV 94 Query: 81 AVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 +++ ++ D + V+G S++ + + + + P A E+T++GY + R Sbjct: 95 SMSAMEQLATGDEVAAVVGPYTSATANAVAKLANQYKVPQVVPAAAKEEITRQGYDWVFR 154 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 + LE KP+ IA I++ +G +A + +D + VV + Sbjct: 155 LNAPAHQYAQSLLDAALEFGKPKTIAFIYESTDFGTSVATAGKDYAQKKGLKVVGDEAYQ 214 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ-FMGPEGVGNASLSN 258 G D+ + + ++K N D V+ Y + ++RQ+R VGLK Q F+G + + Sbjct: 215 KGAPDYRSTLTKVKAANPDLVFMVSYVADAILLMRQSREVGLKPQAFLGGGAGFDTAQFE 274 Query: 259 IAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 D + + + P + + + + YAA+ + A ++ G Sbjct: 275 SEKDISNLVFSVTQWTPESTPGAEEFANRYRQKYGKKPTYHAACAYAAMMVVGEAAQKAG 334 Query: 319 SDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFD---FGVFQWHADGSST 366 + + ++LKA ++G +++ + + V Q+ S T Sbjct: 335 G-DRKKIQEELKAGKWTGIMGEVDFQDYEGFTNQNKLIMPVIQYQGGKSVT 384 >UniRef50_A5CZW6 ABC-type branched-chain amino acid transport systems, periplasmic component n=3 Tax=Peptococcaceae RepID=A5CZW6_PELTS Length = 402 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 10/344 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D +K+ +G SG G G R A+ DIN GG+ G K+ +E D + + V Sbjct: 42 DTVKIGFLGNKSG---YGGSECLKGIRMAVDDINRTGGLLGKKVELMEGDHGGNSSETVR 98 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 V +V+ +IG + T+ A+ + +D +++ISP A+ + + G ++I R A L Sbjct: 99 VTQSLVDRKAAVIIGDNTTGITKLAATVCQDNNVVLISPTASGSGVVEMG-EYIFRIALL 157 Query: 144 DSSQGPTAAKYILETVKPQRIAII-HDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 DS P +Y+ +T++ +++A++ + + Y EGLA + L + +V I + Sbjct: 158 DSVAVPAVVRYLADTLEWKKVALVKNIGRSYTEGLAAIFKPALVRSGIEIVNEQKIRKND 217 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 DFSA +A LK+ + D + + G E +++ R GL+ +G +G+ L G Sbjct: 218 TDFSAQVAALKQSSFDGLVFPGNNVEAYLFIKEMRKQGLRQAVVGGDGMYTRELIENGGI 277 Query: 263 AAEGMLVTMPKRYDQ---DPANQGIVDALKA-DKKDPSGPYVWITYAAVQSLATALERTG 318 EG L D P V+ +A + + Y AV A A+ G Sbjct: 278 DVEGTLTYAGFAVDPESASPETMEFVEKYRAVNNNLTPDVFAAQAYDAVNLAADAIRAAG 337 Query: 319 SDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 S EP + L + V G +D + + + Sbjct: 338 SAEPAKFKEKLARTKNWRGVSGTTTFDRDREPVKSPLYLMEVKE 381 >UniRef50_A0LGK7 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGK7_SYNFM Length = 375 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 86/355 (24%), Positives = 148/355 (41%), Gaps = 11/355 (3%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S +D IK+ + M+G +A +G+ME+ G + A + + G K+ V D D Sbjct: 21 SLALASDTIKIGLYLPMTGGVAAYGEMEWAGIQIARDM---EPQVLGKKIDLVLLDTKSD 77 Query: 78 PKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 +A +V + + +IG S +T + I E GI +SP AT+ L +G + Sbjct: 78 KIEATNAMTLLVEKEKVAGIIGEAISGNTMAGNRISEAAGIPSVSPSATS-VLVNQGKKF 136 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFF 195 R +D QG AA++ + +K + A+I D Q Y GLA+ + V+ Sbjct: 137 AFRACFIDPLQGEVAARFAVNNLKAKSAAVIIDNAQDYCVGLAKFFETEFVKLGGKVLSK 196 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 I G++DFSA ++ ++ D +Y YY E + +QAR +G+ + +G + Sbjct: 197 TYIQTGDQDFSAQLSSVQAVKPDIIYAPNYYTEDALLAKQARDLGIVCPILTGDGAQADT 256 Query: 256 LSNIAGDAAEGMLVTMPKRYD--QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 L + G A E M T D + K + + + A L A Sbjct: 257 LIQVGGKAVEDMYFTAHFHKDAATTDRAAEFMKRYKEKHNKEADAFQALGADAYFLLVDA 316 Query: 314 LERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 + R GS + + L + V G + E+G+ + + A+G Sbjct: 317 VRRAGSTDGARVRDALASTKDFKGVSGTITMGEEGNPI-KSMVILKV-ANGKFVY 369 >UniRef50_A5D536 ABC-type branched-chain amino acid transport systems, periplasmic component n=2 Tax=Bacteria RepID=A5D536_PELTS Length = 407 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 81/381 (21%), Positives = 156/381 (40%), Gaps = 20/381 (5%) Query: 1 MKRN------AKTIIAGMIALAISHTAMA----DDIKVAVVGAMSGPIAQWGDMEFNGAR 50 MKR II G++ +A +++KV V+ ++G A +G+ME N Sbjct: 1 MKRFRWQFAALSFIIIGLMLIAAGCGGGQGAKKEEVKVGVILPLTGSEAMFGEMEKNSFE 60 Query: 51 QAIKDINAKG--GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQP 107 A++++ A G I G ++ + DD A + A K+VN D + + G S+ + Sbjct: 61 MALEELKAAGKAAIGGKEIKLLFEDDQGKQDVAKSAAEKLVNQDKVVMLTGGYSSACSNV 120 Query: 108 ASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGP-TAAKYILETVKPQRIAI 166 + + I + ++ ++T++G+Q + R A +S+ I + VKP+ +A+ Sbjct: 121 IAGSAQAMNIPFLVVTGSSDDITKKGWQWVFRGAAAPASKYTGALWDMIEKVVKPKNVAL 180 Query: 167 IHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYY 226 I++ +G A++ + + N+VF G DF ++A ++ N D ++ Y Sbjct: 181 IYENTDFGTSSAKAFRADCEKRGINLVFDQAYEHGAIDFKPMLANMRSTNPDMIFAVSYV 240 Query: 227 PEMGQMLRQARSVGLKTQFM--GPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQG 283 + + +Q + + G G AG A+E + T + P Sbjct: 241 MDAAMITKQMKELDFNVNLFVGGGAGYTMPEFKENAGSASEYVASTTLWVPNVAWPGASD 300 Query: 284 IVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 + K + YA + +A AL R + K LK T++GP+ + Sbjct: 301 YFNKYKQKYGKEPDYHGAQAYATMYIIADALSRAKELTNTGIQKALKETDMMTIMGPVKF 360 Query: 344 DE---KGDLKGFDFGVFQWHA 361 ++ + V QW Sbjct: 361 EDWEGYTNQNKPTTYVVQWQK 381 >UniRef50_B9L7B1 High affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=2 Tax=Nautiliaceae RepID=B9L7B1_NAUPA Length = 379 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 98/369 (26%), Positives = 163/369 (44%), Gaps = 19/369 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ ++A ++ ++ T A +IKV V+ ++GPIA +G +G + + N Sbjct: 1 MKKK---LLALGLSALVASTLAAKEIKVGVLQPLTGPIASFGQKTLDGIKLVHEKYNTLP 57 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GDK+V V D D Q V ++V+ + + V G L SS + Sbjct: 58 --NGDKIVLVVVDGQFDKVQTVNGYKRLVSGEKVVAVEGPLASSMSLSIKRFAGATKTPT 115 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 ++ ATNP +T +G ++I R D QG AAKY L+ + + KQ Y GLA+ Sbjct: 116 VTQIATNPRVT-KGSKYITRACFTDDFQGTVAAKYALKHNLKTAVIVFDMKQDYSVGLAK 174 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + K V+ I +G+KDF+A +A++KK N DF+Y Y PE G ++RQ R+ Sbjct: 175 AFEKAYKKDGGKVLKKLFINSGDKDFNAQVAQIKKLNPDFIYTPIYAPEEGLLVRQLRAA 234 Query: 240 GLKTQFMGPEGVGNASLS-NIAGDAAEGMLVTMPKRY--DQDPANQGIVDALKADKKDPS 296 G+ + MG +G+ + +L +AG AA G++ T P ++ + KA Sbjct: 235 GVNSPVMGGDGIADPALLKKLAGKAANGVMYTDHFDPAKAPTPLSKEFIKDFKAKYGRSP 294 Query: 297 GPYVWITYAAVQSLATALE----RTGSDE---PLALVKDLK-ANGANTVIGPLNWDEK-G 347 + + A++ + + L+ V G L D K G Sbjct: 295 SAFAATGADGYLLIYNAIKQCDTKANKTNLQFKQCINDALRHTKNLEAVTGYLTIDPKTG 354 Query: 348 DLKGFDFGV 356 + V Sbjct: 355 NPINKPAVV 363 >UniRef50_A1VTJ7 Extracellular ligand-binding receptor n=6 Tax=Burkholderiales RepID=A1VTJ7_POLNA Length = 407 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 81/361 (22%), Positives = 155/361 (42%), Gaps = 8/361 (2%) Query: 3 RNAKTIIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 + A IA A + A + IK+A + +SG A G NG A+K+INA GG Sbjct: 4 KFALKFIAACAIAASATAGFAQEMIKIANIVELSGSGATAGTNFKNGIELAVKEINASGG 63 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 I G ++ D +P A + K +++ + + G + S S + + + Sbjct: 64 ILGKQIQTTTSDTQSNPGVAKGLTQKAIDNDVFAIFGPVFSGSIMVSMAESRRAEVPNFT 123 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 G +T++G ++ RT+ ++ P A+Y+ + K + IA+I+ +G+G + Sbjct: 124 -GGEAAAITEQGNPYVFRTSFTQATAMPKVARYMSDQAKLKTIAVIYVNNDFGKGGLDML 182 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + L+ ++ + AG+ DFSA + + K+ N + V+ E ++LR+ R G Sbjct: 183 KKALEDSSTRITTAISTDAGQVDFSAAVLKAKQSNAEGVFVYSNEEESARILRELRKQGW 242 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYV 300 +G + + +AGDAA G + + + PA + + + S Sbjct: 243 TKPIIGETTLTGQKVIELAGDAANGAIAHVGLTVNAPVPAVRAFSAKFEKEYSYVSDHNG 302 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLK-----ANGANTVIGPLNWDEKGDLKGFDFG 355 Y+ + L A+++ G + A+ + ++ + +D KGDL F Sbjct: 303 MKGYSGIYFLKAAIDKVGKLDRKAVADAMHHLKVNSDRYPGALMYTEFDGKGDLDRMSFM 362 Query: 356 V 356 V Sbjct: 363 V 363 >UniRef50_C0CV37 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CV37_9CLOT Length = 412 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 143/361 (39%), Gaps = 32/361 (8%) Query: 1 MKRNAKTIIAGMIALAISHTAM------------------------ADDIKVAVVGAMSG 36 M R + ++ ++S A D I + V +SG Sbjct: 5 MNRRYVALATALVMFSMSGCAKDAGSASQGGSQSQEAGTQETGAGDEDVIVIGSVNDLSG 64 Query: 37 PIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKY 95 + G+ NG + A+++INA GG+ G ++ V YD+ D ++++ ++ + D Sbjct: 65 NRSVNGNAINNGVKLAVEEINAAGGVLGRQIKLVTYDNKNDSQESINGYTRLADLDKASA 124 Query: 96 VIGHLCSSSTQPASDIYEDEGILMIS----PGATNPELTQRGYQHIMRT-AGLDSSQGPT 150 VI SS +I + I ++ P A TQ Y ++ Q Sbjct: 125 VITSDASSICLSLVEISNQKKIPLMGMPSDPRAVMNPDTQEVYPYMFLVDQPNAPQQANI 184 Query: 151 AAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALI 209 AKYI ++ A+ +D Y +++ + K VV + + ++D+ + Sbjct: 185 MAKYIEANTDLRKAAVFYDQSNAYTVTNSQAFIEIWKEIG-EVVIVETCNSNDQDYKTQL 243 Query: 210 ARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLV 269 ++K +F+Y ++ M++QA GL +MG + + LS + + + Sbjct: 244 NKIKNSGAEFIYCPNMPSQLVMMVQQAVQSGLDIPYMGAMDMADPFLSLLNDPQSLSLAY 303 Query: 270 TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL 329 + QD Q ++ KA + Y A+ L A+E+ GSD+P A+ L Sbjct: 304 FQMVCWMQDEKIQPFFESYKAKYGEDPIVKSVNGYDAMYILKAAIEKAGSDDPEAIRNAL 363 Query: 330 K 330 + Sbjct: 364 E 364 >UniRef50_B3ENC9 Extracellular ligand-binding receptor n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ENC9_CHLPB Length = 377 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 86/352 (24%), Positives = 162/352 (46%), Gaps = 9/352 (2%) Query: 4 NAKTIIAGMIALAISHTA-MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 A I AG+ A S + I + V+ ++G +A +G+ GA A++ I+ + Sbjct: 14 LAMLITAGIFAAGCSPQQNKTEGITIGVLLPLTGELASYGEPMKKGAEIALEQISTENKG 73 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 + K V D DPK AV+ K+V+ +G Y+IG + SS+T I E + ++S Sbjct: 74 EEYKYNAVYIDSQADPKTAVSGMQKLVSLNGACYIIGDVSSSTTLAMVPIAEKNKVFLLS 133 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 PGA++P+L R + +A++I +K ++A+++ +YG GL Sbjct: 134 PGASSPKLRGIS-PFFARNYPSSVEESIDSAEFIKNVLKKDKVAVVYVTNEYGLGLVDMF 192 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 Q V + E DF +IA+L++E + +Y G EMG+ ++Q + Sbjct: 193 QKKYTEIGGQVTMKEPYKFEESDFRTIIAKLRQEQPEVIYLAGNQKEMGKFMKQYAESEI 252 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQ---GIVDALKADKKDPSGP 298 + N+AG AA+G++V +P +DP + ++ KA + Sbjct: 253 SATIVSNISFLEPDCINVAGKAADGVIVPVPYFNPEDPLMKGTHAFAESYKAKFGEYPSL 312 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIGPLNWDEKGDL 349 V + Y A+ + A+ G+++P + ++ + +G L++ + GD+ Sbjct: 313 AVAVGYDAMMLMNKAVTD-GNNDPEKAAEVIRNLKKYDGAMGTLSFTD-GDV 362 >UniRef50_C1CVB8 Putative branched chain amino acid ABC transporter, periplasmic component n=1 Tax=Deinococcus deserti VCD115 RepID=C1CVB8_DEIDV Length = 384 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 78/347 (22%), Positives = 154/347 (44%), Gaps = 6/347 (1%) Query: 5 AKTIIAGMIALAISHTAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 + ++ +++A++ +A A IK+ + +++G A++G M+ G + + ++N KGGI Sbjct: 1 MRKVMLFTLSIALAGSAAAQGTIKIGAITSITGRFAEFGKMQLAGFKVGVAEVNRKGGIG 60 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 G K+ + D+A D + +A A ++VN G+ VI SS + + + + + Sbjct: 61 GRKIELLIEDNASDVNKGLAAAERLVNAGVPLVINEYSSSLVKAQAQYLARQKVPNLVIT 120 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183 ++ ++T+ G +I R + I K + +A+I + + +A + Q Sbjct: 121 SSGDDITKPGSDYIFRLNQPATEYARVILN-IFRDKKFKTMAVIAGTGAFEKSVADAAQV 179 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 K ++V G DF ++ R+K +N D + Y + ++RQAR VG+K Sbjct: 180 IAKEYGISIVEDQRYDKGLTDFRPVLNRIKAKNPDGLLMVSYAEDSVALMRQAREVGVKP 239 Query: 244 QFM--GPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGI-VDALKADKKDPSGPY 299 + G G +G AAE ++ P Q + V+ +KA + Sbjct: 240 RLFAGGAAGFALPEFVKDSGSAAESVITATAWIPQLRYPGVQKLNVELVKALGGHEPSYH 299 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEK 346 YA V A A+ R G+ + + + L + T GP+ + + Sbjct: 300 AAQAYAGVIVAAEAIRRAGNTDREKVKEALNSVNMQTAFGPIQFKDY 346 >UniRef50_Q7W0W5 Putative branched-chain amino acid-binding protein n=2 Tax=Bordetella RepID=Q7W0W5_BORPA Length = 404 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 89/362 (24%), Positives = 148/362 (40%), Gaps = 19/362 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAM-----ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 M+R A + ++ ++ A AD +K+ ++G+++GP A +G GA A + Sbjct: 7 MRRLALVALPLALSAGMAPAAAEPGVTADSLKIGILGSLTGPFAIFGSGNLAGATLAFEQ 66 Query: 56 INAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYED 114 NA GGI G KL + DD P + +A ++V + + V G S+ Q ++ Sbjct: 67 ANAAGGIHGRKLEWLSLDDESSPPKGIAAYKRLVGPEQVFAVFGPSASAVGQAMVQTFKT 126 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAG-LDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 + P +T ++ RT D QG A Y L+ +K +R+A+I +Y Sbjct: 127 STTPTFISVFSTPIVTDPPLPNVFRTGPMNDREQGVAIANYALDHLKAKRVALIRQSDEY 186 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+ SV LKA A V + + DF+A + ++ D + GY + Sbjct: 187 GKSGGESVLQRLKARGAEPVALEVFNVYDTDFNAQLTKIAAARPDVLVVYGYPNPSAIIT 246 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP----KRYDQDPANQGIVDALK 289 RQAR +G++ +G G+ I G AA G M P Q +A Sbjct: 247 RQARQLGVEGVVLGSNSAGSRKYPEIVGKAAAGTQNIMTLEILPESSSTPQAQAFREAFV 306 Query: 290 ADKKDP-----SGPYVWITYAAVQSLATALERTGS-DEPLALVKDLKA-NGANT-VIGPL 341 A D + Y + ++R G+ LVK L++ G T + P Sbjct: 307 ARFPDLARQGRPDLGDALGYGGALAFLEGIKRAGAQPTQQGLVKALESLQGFETGITLPT 366 Query: 342 NW 343 + Sbjct: 367 TF 368 >UniRef50_UPI00016BFE10 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFE10 Length = 384 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 78/352 (22%), Positives = 152/352 (43%), Gaps = 5/352 (1%) Query: 5 AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 + + M+ + A+ IK+ ++G AQ+G GA AIK+ N GG+ G Sbjct: 12 LLGLGSSMLVACGGDESGANTIKIGGSFDVTGATAQYGIPANKGAILAIKEYNEAGGVLG 71 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 ++ + D+ A + K+ + + IG S +T+ +++ + +GI MISP Sbjct: 72 KQIEYIFEDNKGVQTDAASAYKKLSDSKDVIGFIGADISGTTETIANLAKXDGIPMISPS 131 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAI-IHDKQQYGEGLARSVQ 182 AT E+T +I R +D +QG A + ++ + A+ I+++ Y G+A + Sbjct: 132 ATKKEITSIA-PNIFRACYIDPTQGEILANFADTSLNAKTAAVMINNESDYSVGIAEAFI 190 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 + ++A +VV TA + DF +++A + N D + YY + ++ QAR +G+ Sbjct: 191 EQVEALGIDVVAQVNYTAADVDFKSILAPVANANPDVILIPDYYEAVAKIAPQAREIGIS 250 Query: 243 TQFMGPEGV-GNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYV 300 F+G +G G ++ + G + D P Q + + + Sbjct: 251 GTFLGGDGWDGVTAMVGTNAEPINGSYFINHYTTEDDSPIVQDFIANYTEEYGTTPNAFA 310 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 + A L R + + A+V ++ V G + +DE + + Sbjct: 311 ALGXDAACILLEGFARAETTDSSAVVNAIQNIDIEAVTGHITFDENRNPQKS 362 >UniRef50_C8W363 Extracellular ligand-binding receptor n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W363_DESAS Length = 380 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 8/327 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 DI + S ++ G A+ INA GGI G K++ VE DD + V Sbjct: 39 DIVIGAAWPFS----SQNELFKEGVELAVDQINAGGGINGHKVLLVEKDDKGTVTGGMNV 94 Query: 85 ANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A + VIGH S + AS IYE GI+M+SP +T PELT++GY++I R Sbjct: 95 AQSFTKVPNLTAVIGHRFSYISIAASYIYEKAGIVMLSPTSTAPELTKKGYKYIFRDIPS 154 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 D+ A Y + + + I + YG GLA S +D + A +V A + Sbjct: 155 DNEIARQLALYAA-GLGHRHMVIYYADDSYGIGLANSFEDYARKAGIEIVDRFSYYADLR 213 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 D + A K + D V+ Y P+ Q + +G+ + + L IAG+A Sbjct: 214 DLDRISATWKALDYDGVFMAQYMPDGAQFIADTAKLGISVPVFAGDAMDTPQLYRIAGNA 273 Query: 264 AEG-MLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 AEG ++ T+ D A + ++ + Y Y AV LA A++ TGS P Sbjct: 274 AEGTVIGTIFNPQDPRQAVKSFINNFYSKYGKMPTQYAAQGYDAVNLLAKAVKETGSASP 333 Query: 323 LALVKDLKA-NGANTVIGPLNWDEKGD 348 A+ + L+ + V G + + GD Sbjct: 334 SAVAQKLRTFKDVSGVAGIHTFADNGD 360 >UniRef50_B3W8M3 Branched-chain amino acid ABC transporter, substrate binding protein n=19 Tax=Lactobacillales RepID=B3W8M3_LACCB Length = 397 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 100/372 (26%), Positives = 173/372 (46%), Gaps = 26/372 (6%) Query: 4 NAKTIIAGMIALAISHTAMA--------DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 +A I A M+ALA T A + IK+ V +SG +A +G+ + G A+K Sbjct: 11 SAGVIAASMLALAGCATKSATSKGNTAGNTIKIGVNMELSGAVAGYGEQQKQGIELAVKQ 70 Query: 56 INAKGGIK----GDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASD 110 INA GGIK K+ V D+ A +VA ++ N D + ++G ++ + Sbjct: 71 INAAGGIKVGNTKKKITAVYRDNKSSTSGAASVAAQLANTDKVVAIVGPATTNDGTASIP 130 Query: 111 IYEDEGILMISPGATNPELTQRGY----QHIMRTAGLDSSQGPTAAKYILETVKPQRIAI 166 + M+SP AT+P T + ++ R + QG AA + +T+K + +AI Sbjct: 131 NVTKAAVPMVSPSATDPNFTLQKNGSVQPYVFRACFNNDFQGDHAAIFANDTLKAKNVAI 190 Query: 167 IHDK-QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGY 225 I D YG GLA++ + N+V +G+KDF+A++ +K + ID +Y GY Sbjct: 191 IADNSTDYGTGLAKAFKKK---FKGNIVTTQYYQSGDKDFNAMLTTIKSKKIDAIYAPGY 247 Query: 226 YPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA-AEGMLVTMPK---RYDQDPAN 281 Y E+G +++QAR G+K F+G +G+ + L+ IAG A A + T P + Sbjct: 248 YSELGLVIKQARQSGIKVPFIGADGMADPKLAQIAGAANATDIYYTTPFSTLSANSSKLV 307 Query: 282 QGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGP 340 + + + K + + + + Y +V + A+E + + ++ K L V G Sbjct: 308 KNFMTSFKKQYQTEAPTFSALAYDSVYMIKQAIEDQKAADSASIAKGLAKIKKMPAVTGT 367 Query: 341 LNWDEKGDLKGF 352 D + + Sbjct: 368 TTIDSHHNPEKP 379 >UniRef50_A1AQF9 Extracellular ligand-binding receptor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQF9_PELPD Length = 372 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 76/369 (20%), Positives = 137/369 (37%), Gaps = 10/369 (2%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R +++A I++ VG MSG +A G NGA A+++ NA+GGI Sbjct: 6 RFLYSLLALGCIALFLSGCERKPIRIGFVGGMSGRVADLGVGGRNGALLAVEERNARGGI 65 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G + + DD + + A V ++ ++ +IG + SS I ++ +SP Sbjct: 66 NGRPVELIIRDDEQNVETARKVTRELTESNVEALIGPMTSSVALAMVPIVNQARLVTVSP 125 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD--KQQYGEGLARS 180 T+ +L+ + +R S+ P +A + L+ +R AI++D Y Sbjct: 126 TVTSTQLSGAD-DYFLRVLPDTSTYAPKSALFHLKKSGLRRAAIVYDTGNSSYTTSWLAG 184 Query: 181 VQDGLKAANANVVFFDGITAGEK-DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + + ++V T+GE FS ++ L + + D V + + +Q R + Sbjct: 185 FRKSFENSGGSIVVSRSFTSGENIAFSPIVRDLLRHDPDLVVLVCNAVDAALLCQQIRKL 244 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDALKADKKDPSGP 298 + E + G A EG+ D P + + + + G Sbjct: 245 DRRVTITVSEWGSTERFIELGGSAVEGVYFAQFINHGDVTPRYRNFLASYRTRFGQDPGF 304 Query: 299 YVWITYAAVQSLATAL-ERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 Y A + AL R G + + A V + D GD + F Sbjct: 305 PGLAGYDAANVVLDALTARKGDASLKDTI--VSAGSYQGVQRKIVLDRFGDARSTTF--I 360 Query: 358 QWHADGSST 366 DG Sbjct: 361 TVVKDGRFV 369 >UniRef50_Q5P917 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=18 Tax=Proteobacteria RepID=Q5P917_AZOSE Length = 477 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 132/336 (39%), Gaps = 13/336 (3%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 A +++ V G +G + G G R A +INA GG+ G + VE DD Sbjct: 100 SVQAAPPLRIGVSGPFTGGSSPMGISMREGIRIAAAEINAGGGVLGRPIELVERDDEARN 159 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR----- 132 ++ V +++ + + +G + + + Y+ I +I+ AT +T++ Sbjct: 160 ERGAQVVQELIEKEHVVAGLGIVNTGVALASQRAYQHARIPVITSVATGSVITKQFVPPQ 219 Query: 133 -GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANAN 191 + R + D+ Q ++ +R++I HD YG+ ++ L A + Sbjct: 220 YPDNFVFRISANDTLQAAMIVMEAIDRRGLKRVSIFHDATNYGQLGREDLERALAARGVH 279 Query: 192 VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV 251 V + E D + + R ++ + + G PE+ Q+ + + +G + Sbjct: 280 PVTVERFQIRESDMTTQLRRAREAGAEAILTYGIGPELAQIANGMARMNWRVPLIGSWTL 339 Query: 252 GNASLSNIAGDAAEGMLVTMPKRYDQ-DPANQGIVDALKA---DKKDPSGPYVWITYAAV 307 ++ + AG AEG + + P + +DA K + P P Y ++ Sbjct: 340 AMSNFIDNAGPNAEGARMPQTFIAEPTTPGRRAFLDAWKKSSGSARIPVPPAAAQGYDSL 399 Query: 308 QSLATALERTGSDEPLALVKDLKA--NGANTVIGPL 341 LA A+ + GS E + + L+ VI Sbjct: 400 LLLAAAIRQAGSTEGDRIREALEELREKVEGVIMTY 435 >UniRef50_Q21BI4 Extracellular ligand-binding receptor n=23 Tax=Bacteria RepID=Q21BI4_RHOPB Length = 399 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 85/374 (22%), Positives = 154/374 (41%), Gaps = 19/374 (5%) Query: 2 KRNAKTIIAGMI--ALAISHTAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 +R+ ++A + AI +A A +KV V +++GP + GD E + + INA Sbjct: 14 RRHITRLLAAVAVSGFAIVPSAFAQATVKVGSVLSVTGPASFLGDPEDKTLKLYVDKINA 73 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGI 117 GG+ G K+ V YDD D +A A +++ +D + ++G + +T ++E+ I Sbjct: 74 AGGVAGKKIELVVYDDGGDANKARTFATRLIEDDKVVAMVGGSTTGTTMAMIPVFEEAQI 133 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 IS A E+ + +++ +T D + I + + A+I +G + Sbjct: 134 PFISL-AGAIEIIEPVRKYVFKTPHTDKMACEKIFENI-KQRGFTKAALISGTDGFGSSM 191 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKK-ENIDFVYYGGYYPEMGQMLRQA 236 +V + + D +A + ++K I V G+ + R Sbjct: 192 RAQCVKVAPTYGVQIVTEETYGPRDSDMTAQLTKIKGTAGIQAVVNPGFGQGPAIVTRNY 251 Query: 237 RSVGL-KTQFMGPEGVGNASLSNIAGDAAEGM------LVTMPKRYDQDPANQGIVDALK 289 +GL T GV + S ++AG AAEG+ L+ K D DP + +VD K Sbjct: 252 AQLGLSSTPLYQSHGVASKSFIDLAGPAAEGVRLPAAALLVGDKLPDGDPQKKVVVDYKK 311 Query: 290 ADK---KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDE 345 + K P + Y + L A++R S +P + +++ G G + Sbjct: 312 TYEDSTKQPVSTFGGHGYDGLFILVEAMKRANSTDPKKIRDEIEKTKGFVGTGGIVTMSP 371 Query: 346 KGDLKGFDFGVFQW 359 D G D F+ Sbjct: 372 T-DHLGLDLSAFRM 384 >UniRef50_Q1IZ32 ABC-type branched-chain amino acid transport system, periplasmic component n=6 Tax=Deinococcus RepID=Q1IZ32_DEIGD Length = 384 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 98/369 (26%), Positives = 169/369 (45%), Gaps = 11/369 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ A ++ + + ALA+ +K+A + +SG + G NGA+ A+ + + Sbjct: 1 MKKTALSL-SVLTALALGSAHAQTVVKLATLTPLSGGQSDLGTQIRNGAQLAVNEYKPQF 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILM 119 G L + +DD DP A A KI D I V+G L S PAS + M Sbjct: 60 KKLGMDLQLIAFDDQADPATGTAQARKIAADRQILAVVGTLNSGVAIPASAALAPSHVAM 119 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 ISP T ++T RG ++ R D +QGP A +I +K +++ I++DK YGEGLA+ Sbjct: 120 ISPANTANQVTDRGLSNMNRIVARDDAQGPAGANFIANNLKAKKVYILNDKTAYGEGLAQ 179 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 V+ LKA V+ +G DFS++IA++K D +Y+GG Y ++G ++Q R Sbjct: 180 EVEKALKAKGVQVIANEGTEEK-SDFSSIIAKIKLNRPDAIYFGGIYNQVGVFIKQLRDA 238 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGP 298 G+ +G +G+ ++ L+ IAG A + T + PA + + P+ Sbjct: 239 GIDAPVVGGDGLDSSQLAVIAGAGANNIYFTTVAAPLEALPAAKVFATNFQKTFNRPAQG 298 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVK------DLKANGANTVI-GPLNWDEKGDLKG 351 + Y A + + + ++ ++ G ++++ +GD K Sbjct: 299 FGAFGYDAAKVALQGILNAVRANGNKVPSRQQVETAIRKGSYTGLLSGSVSFNSEGDRKA 358 Query: 352 FDFGVFQWH 360 V + Sbjct: 359 ATLYVMKVD 367 >UniRef50_B1Y595 Extracellular ligand-binding receptor n=10 Tax=Proteobacteria RepID=B1Y595_LEPCP Length = 380 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 90/341 (26%), Positives = 148/341 (43%), Gaps = 9/341 (2%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 + I++A V +SG A G +G A+K+INA GGI G K+V D P A Sbjct: 24 AQEVIRIANVVELSGSGASPGTYFRDGVELAVKEINAAGGILGRKIVTTTADTQTQPGIA 83 Query: 82 VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 +A K V+DG V G + S S + + + G +TQ+G ++ RTA Sbjct: 84 KGLAAKAVDDGAFAVFGPVYSGSIMVSMAETRRAEVPNFT-GGEAAAITQQGNPYVFRTA 142 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 SS P A+YI K + + +I+ +G+G ++ L +V G Sbjct: 143 FGQSSSFPKLARYI--NTKARTLVVIYQNNDFGKGGRDTLTKLLDGGPTRIVGEMATDQG 200 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 + DFSA + + ++ N D V+ E + L++ R G +G + + + +AG Sbjct: 201 QIDFSAAVIKARQANADAVFVYLTEEESARALKELRKQGWSKPIIGETVLVSQKVIELAG 260 Query: 262 DAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 +AA G+ + D +P K +Y V +L A+E+ G Sbjct: 261 EAANGVTGHVGLTVDAPNPEMLKFKAKFYQAYKYIPDHNGIKSYMGVYTLKAAIEKAGKL 320 Query: 321 EPLALVKDL-----KANGANTVIGPLNWDEKGDLKGFDFGV 356 + +A+ K + KA VI +++D+KGDL F V Sbjct: 321 DRVAVAKAMKGLEVKAAKYPGVIMDVSFDDKGDLDRESFLV 361 >UniRef50_A6WC82 Extracellular ligand-binding receptor n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WC82_KINRD Length = 391 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 169/348 (48%), Gaps = 12/348 (3%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 D+ + GA++GP A G E NG + A+ NA+ G ++ YD D QA + Sbjct: 45 DVSIGFFGALTGPNANLGVNEQNGVKLAVDQHNAESGA--CQVTVTPYDSQGDQNQAQGL 102 Query: 85 ANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A ++V ++ + ++G S ++ A I+++ GI+ ISP ATNP L + G++ R G Sbjct: 103 AQQVVGDENVLGIVGPAFSGESKVADPIFDEAGIVGISPSATNPALAENGWKTFFRVLGN 162 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 D+SQGP AA YI +T+ Q++ +I D +YG+GLA V++ L A V + I G+ Sbjct: 163 DASQGPAAATYISDTLGKQKVYVIDDATEYGKGLADIVRESL---GAKAVKNNTIQTGQT 219 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL---KTQFMGPEGVGNASLSNIA 260 DFSA++A ++ D V++GGYYPE G +L+Q R GL K F+ +G + L A Sbjct: 220 DFSAVVADVQASGADAVFFGGYYPEGGLLLKQLRESGLSADKLAFITDDGAKDEGLITAA 279 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 G AA + D A V Y + A L + G+ Sbjct: 280 GAAAAEGALMTCPCLPPDKAGGTFVADYTEAYGTAPATYSAEAFDAANILLDGIAE-GNV 338 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 L+ +K+ V L +DEKG+ + V+ + +G A Sbjct: 339 TREDLLAYVKSYDKPGVTKQLKFDEKGEP--SEVSVWAYKVEGGEIVA 384 >UniRef50_C8VXD1 Extracellular ligand-binding receptor n=2 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VXD1_DESAS Length = 394 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 75/372 (20%), Positives = 136/372 (36%), Gaps = 28/372 (7%) Query: 1 MKRNAKTIIAGMIALAISHTAMA--------------DDIKVAVVGAMSGPIAQWGDMEF 46 M++ IIA ++A + A + ++ V +SGP + G E Sbjct: 1 MRKLPVYIIASLLAAVFLLSGCASGTKETGAPTDTAKEPYRIGAVVDISGPSSSLGVPER 60 Query: 47 NGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSST 105 N + +NA GGI G + D+ D +AV K+++ + VIG S + Sbjct: 61 NTLQMLADKLNAAGGINGHPVELTILDNKSDETEAVMAIKKLIDRQKVLAVIGASSSGPS 120 Query: 106 QPASDIYEDEGILMISPGATNPELTQRG-YQHIMRTAGLDSSQGPTAAKYILETVKPQRI 164 D + E +IS A + + + + +TA D A Y+ E ++ Sbjct: 121 LAMVDTAQKEQTPLISMAAASTIVEPVAERKWVFKTAQSDLVTANRIAGYLKEK-GLTKV 179 Query: 165 AIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGG 224 A ++ YG+ + + + + + A +KD + + R+K Sbjct: 180 AFLYTNNAYGDNGRKGFEMVAQKEGLTITDEEKFEAADKDMTPQLTRIKNSEAQAAIVWA 239 Query: 225 YYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGM------LVTMPKRYDQD 278 P + R + + L + G GN +A AAEG+ + + D D Sbjct: 240 IPPTASIVTRNFKDLKLTIPLLHSHGSGNQKFIELAQGAAEGVILPIGKIAVAEQLPDSD 299 Query: 279 PANQ---GIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GA 334 P + +D P + Y A + A+E+ G D A+ +L+ Sbjct: 300 PQKKILTNYIDDYTKKYNAPPNSFGGYGYDAFNLVVRAIEKAG-DNKAAIRDELEKIQNF 358 Query: 335 NTVIGPLNWDEK 346 + V G N +K Sbjct: 359 SGVSGIFNLSDK 370 >UniRef50_A1A0J1 Solute binding protein of ABC transporter for branched-chain amino acids n=12 Tax=Bifidobacterium RepID=A1A0J1_BIFAA Length = 433 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 157/340 (46%), Gaps = 9/340 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D I + V SG A +G+ E G + A+ +INAKGGI G K+ DD D +A Sbjct: 79 DTITLGSVTTNSGTAAAYGEAEVAGFKLAVDEINAKGGINGKKVKLESMDDKGDATEASN 138 Query: 84 VANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 NK+ D + V+G SS+T + + + + I+P AT+ + G ++ RT Sbjct: 139 AFNKLAGDNSVLGVVGPTISSTTAAVAPLADQSKLPAIAPAATSDSIETGG--YMFRTCF 196 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFD-GITA 200 DS QG AAK+ ET+K +++A+++ Y G+ ++ K A +VV + +A Sbjct: 197 KDSYQGEIAAKFAAETLKVKKVAVLYGTGDPYSSGVGKAFAAAAKKAGLDVVAEENSSSA 256 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQ-MLRQARSVGLKTQFMGPEGVGNASLSNI 259 + ++S+ + +++ +F+Y YY G ++ QARSVG K MGP+G +++ Sbjct: 257 DDTEYSSQLQKIQAAGAEFLYAPYYYSVAGPYIIPQARSVGYKGYVMGPDGYDGLKMTDD 316 Query: 260 AGDAAEGMLVTMPKRYDQ-DPANQGIVDAL-KADKKDPSGPYVWITYAAVQSLATALERT 317 + + T D + Q + + KA+K + + Y +V + A+E+ Sbjct: 317 KSLYNKVLYTTHYSPDDTSNAKVQDFIKSYKKANKNADPNTFTALGYDSVYMMKQAIEKA 376 Query: 318 GS-DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGV 356 G + + V G D+KG K + Sbjct: 377 GKNATREGVRNAIAGMSFEGVTGNFTLDKKGSPKKSVVVL 416 >UniRef50_D2B8C1 Extracellular ligand-binding receptor n=2 Tax=Streptosporangineae RepID=D2B8C1_STRRD Length = 400 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 100/356 (28%), Positives = 162/356 (45%), Gaps = 12/356 (3%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S A + +K+ +G ++GP A NGA+ I + N K+ VEYD D Sbjct: 39 SSAAASGTVKIGFMGDLTGPNAGIVIPPRNGAKLVIDEYNKTN--PAVKVELVEYDSQGD 96 Query: 78 PKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 P +AVA+A + + D + +IG S + + E+ I I+ ATN +L + G++ Sbjct: 97 PSKAVALAQQAIKTDKVASMIGPAFSGESAQVGPVLEEAAIPSITASATNTKLAENGWKF 156 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 R DS QGP A +I + + +I DK +YG+ LA +V+ L + A V D Sbjct: 157 WHRILPNDSVQGPGIADFIAGAAAAKNVFVIDDKSEYGKPLADAVRTQLTSKGAK-VTDD 215 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK-TQFMGPEGVGNAS 255 + E DFS+++ ++ D +++GGYY G +L+Q R G+K +F +G + Sbjct: 216 SLDPAESDFSSVVNKVAAAKPDAIFFGGYYAAAGNLLKQLRDKGVKDAKFFSGDGSLDRG 275 Query: 256 LSNIAG-DAAEGMLVTMPKRYD----QDPANQGIVDALKADKKDPSGPYVWITYAAVQSL 310 L + AG AEG LV P D +G DA KA Y Y A Sbjct: 276 LIDGAGAPNAEGALVGCPCYIATPDVTDAKVKGFADAYKAAFSADPSIYAAEGYDAATVF 335 Query: 311 ATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 A+ + G+ P + + V + + G+++ D ++Q DG+ T Sbjct: 336 IEAI-KAGNTTPDKINTFIGTVDLAGVSKQVKFGPNGEVEAKDIYMYQVK-DGAIT 389 >UniRef50_A7ID05 Extracellular ligand-binding receptor n=5 Tax=Proteobacteria RepID=A7ID05_XANP2 Length = 386 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 82/356 (23%), Positives = 157/356 (44%), Gaps = 10/356 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M T+ A +L AD IK+ V ++G A G NGA+ A +INAKG Sbjct: 2 MISRRTTLAALAFSLLAGTAMAADTIKIGVNEPLTGAFAASGTYVVNGAKIAADEINAKG 61 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 G+ G K+ V D+ +P +A +VA K++ +D + ++G SS T E+ + M Sbjct: 62 GVLGKKIELVIEDNKSNPTEAASVAEKLITSDKVPVLMGSWGSSLTLATMPKLEEYQVPM 121 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 + +++ ++T G I R + S + A + I + + +++ + +G G A Sbjct: 122 LVETSSSGKITTSGNPFIFRISPPSSVEA-DAFEPIAKKLGLKKVDFLVINNDWGRGAAA 180 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 LKA V + + +D SA +++LK + D + ++ + +Q ++ Sbjct: 181 DFSKMLKANGVEVGLTETMDQSAQDMSAQLSKLKASDADTIMVTSAVDQLTLLFKQMAAL 240 Query: 240 GLKTQFMGPEGVGNA-SLSNIAGDAAEGML---VTMPKRYDQDP---ANQGIVDALKADK 292 GLK + + G N + AG AA+ + +P ++ P A + K Sbjct: 241 GLKKRVITTGGSQNPDQIIAQAGPAADNTMHLTTFLPWWPEKTPNPEATAYFLGEWKKRG 300 Query: 293 KDPSG-PYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKG 347 + +G + Y ++++A A+ G +P ++ K + GP+ + + G Sbjct: 301 FEFAGATESFRGYDGIRTVAAAIAAGGGTDPASIQKGFWKVDMVGLNGPIKFAKSG 356 >UniRef50_B9L4C0 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L4C0_THERP Length = 443 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 86/351 (24%), Positives = 149/351 (42%), Gaps = 17/351 (4%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + I +A + +SG AQ G+ G AI D+ G + G K+ V D C+P+ A Sbjct: 77 EPIVLAWMLTVSGGTAQLGEDSKRGIEIAIDDL--GGQLLGHKIELVGEDSGCNPEGGQA 134 Query: 84 VANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY--QHIMRT 140 A ++ + I ++G CSS + + I + G++M+SP T P+LT +R Sbjct: 135 AATRLAANPRIVAIVGSSCSSEARVGAPIIDQAGLVMVSPSNTAPDLTDPAKHVNAYLRV 194 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 A D QG AA++++ + +++A IHD Y E LA + +K VV + ++ Sbjct: 195 AHNDKVQGRVAAEFVVNKLGLKKVATIHDGSLYAEQLANVFAENVKKLGGTVVAQEAVSP 254 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV-GL-KTQFMGPEGVGNASLSN 258 + D ++ R+ + + +YY + P + QA+ + GL + M +G+ Sbjct: 255 DDTDMRPVLTRIATQQPELIYYPIFNPAGSFITIQAKEISGLENVKLMSADGLLEPQTVQ 314 Query: 259 IAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKK-DPSGPYVWITYAAVQSLATALERT 317 AG AA G+ ++ P P Q V + P + Y A + A+++ Sbjct: 315 NAGQAAVGLYLSGPDLTVLGPKYQEFVQKYQQKYGTKPVAGFHAHAYDATMMIVEAIKKV 374 Query: 318 GSDEP--------LALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 P AL L + + G L D GD V++ Sbjct: 375 AVQAPDGTLYIPRKALRDALYETKNFQGLTGNLTCDPNGDCADPKIAVYEV 425 >UniRef50_Q73K61 High-affinity branched chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Treponema denticola RepID=Q73K61_TREDE Length = 385 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 7/342 (2%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKG-DKLVGVEYDDACDPK 79 I A G ++G Q+GD E A+KDIN G G+ G K++ YDD D K Sbjct: 34 ATKPIYFAWYGPLTGDAKQYGDTEKIAVELALKDINDAGNGVLGGRKIIVDFYDDKNDAK 93 Query: 80 QAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 +AV +ANKIV + V+G S+ + A+ IYE I+ SP +++ + + G + + Sbjct: 94 EAVNIANKIVAEKKYLAVVGGFGSTPSMAAAPIYEKAKIINYSPTSSHADFSSLG-KFMF 152 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R + A Y+ + + +AI++ +G +A+ + + Sbjct: 153 RNTPTQQIETTQYADYVYTKLGIKSVAILNVNDDWGNNIAKIFTNEFVKLGGKITDLQTY 212 Query: 199 TAGEK-DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 + DF+ +I++ K N + + YY + ++RQA+++ Q + L Sbjct: 213 IPNQTSDFTPMISKAKTTNPEAFFPVAYYQDSANIVRQAKNLDFNVQMILSSSTLKQELI 272 Query: 258 NIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 ++AGD EG + D + P ++ +V TY V+ LATA++ Sbjct: 273 DLAGDIVEGAFIMNAYSPDINTPEFIRVIGEYTKRTGKQGDAFVMQTYDVVKQLATAVDM 332 Query: 317 TGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVF 357 GSD+P+ + + L G N + GP N +E GD +F Sbjct: 333 AGSDDPVVVRETLANMKGYNALSGPYNMNELGDAVRSLVPMF 374 >UniRef50_A8KXL9 Extracellular ligand-binding receptor n=8 Tax=Frankia RepID=A8KXL9_FRASN Length = 403 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 105/378 (27%), Positives = 173/378 (45%), Gaps = 18/378 (4%) Query: 3 RNAKTIIAGMIALAISHTAMA---------DDIKVAVVGAMSGPIAQWGDMEFNGARQAI 53 R ++AG+ + + TA + + G +SG Q G +NG A+ Sbjct: 19 RPVAGVVAGLAMVGAALTACGGGDSNEAGTKEFLIGFQGPLSGENQQLGINAYNGVLTAV 78 Query: 54 KDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIY 112 N GG+ L V DD P+Q A K++++ + V+G + S+ T+ + +Y Sbjct: 79 DLANRTGGLPF-TLRIVASDDQGVPEQGPTAAQKLIDNPDVVAVVGPVFSAPTKASEPLY 137 Query: 113 EDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ 172 G+L +SP AT P LT G+ R D+ QG AA+Y+ + VK +R+ + D+ + Sbjct: 138 SQTGLLSVSPSATAPALTDLGFTSFYRVIAPDTVQGAGAAEYLAKVVKAKRVYSLDDRSE 197 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 YG GL+ +V+ GLK A DGI KD+++ ++ + D VYY GYY + + Sbjct: 198 YGTGLSGAVERGLKQAGVAYT-HDGINP-TKDYTSQATKIMADGADAVYYSGYYSDFALL 255 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAGDA-AEGMLVTMPKR-YDQDPANQGIVDALKA 290 + RS G + +G + AG A AEG L+T P + DPA G V K Sbjct: 256 TKALRSKGYDGAILSGDGSNDDQYIRQAGAANAEGTLITCPCSDANTDPAATGFVSEYKK 315 Query: 291 -DKKDPSGPYVWITYAAVQSLATALERTGS-DEPLALVKDLKANGANTVIGPLNWDEKGD 348 + G Y Y A ++ + L + G+ +++ D + V + ++ GD Sbjct: 316 VNSGLKPGTYSGEAYDATNAIISVLRKLGTGASRESVLADFGSVDFPGVTKRIRFERNGD 375 Query: 349 LKGFDFGVFQWHADGSST 366 ++G V+Q DG Sbjct: 376 VQGSTVYVYQVK-DGQRV 392 >UniRef50_A6X7H9 Extracellular ligand-binding receptor n=3 Tax=Alphaproteobacteria RepID=A6X7H9_OCHA4 Length = 384 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 8/349 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK K +I A++ A+A+D+ + + A +G +A + G + A+ +INA G Sbjct: 1 MKTTLKALILSTALGALAFPALAEDLAIGLATAQTGALAPYDQPSLKGLQMAVDEINAAG 60 Query: 61 GIKGD-KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GI G + + D D Q VA ++V++GIK +I + + A I + I Sbjct: 61 GIAGKFPIKLIAKDTRSDAAQTALVAQELVDEGIKILITPCDADPSIAAGQITQAAQIPT 120 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII-HDKQQYGEGLA 178 S AT P + ++ D+ Q A Y E + ++ Y L Sbjct: 121 FSFCATTPTMPLAVGDYMFGNYPADNVQAAVLANYAKEK-GFKTAYVLKSPDTAYTLKLP 179 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKEN--IDFVYYGGYYPEMGQMLRQA 236 K V+ + G++DFSA + ++K N D + Y P+ +RQ Sbjct: 180 EYFATSFKGKGGEVIGEGTYSMGQQDFSAEVTKIKALNPAPDVIMTAAYEPDFPAFIRQL 239 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPS 296 R G+ T +G +G+ + + + G +G++ T + + KA Sbjct: 240 RGAGVTTPILGSDGIDSPTTFGL-GALVDGVVFTTAGFATEGSPLAAFNEKYKAKFGQDP 298 Query: 297 GP-YVWITYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNW 343 Y+ Y + + A+ + S E A+ + + + V G +++ Sbjct: 299 DTVYIANGYDLGKVIEAAVTKADSIESTAIREAIASLENVEGVTGKISY 347 >UniRef50_B6WW20 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WW20_9DELT Length = 372 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 82/354 (23%), Positives = 145/354 (40%), Gaps = 12/354 (3%) Query: 1 MKRNAKTIIAGMIALAI---SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 M + ++ G++ +++ T A+ + + + ++G A A+ A K N Sbjct: 1 MLKKILHVLVGVLGISVCFSGSTLAAEPVLIGMNTPVTGAAAGEAVYFMKAAKLAEKHAN 60 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANK-IVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 A G + + D+ A+A NK I D I ++G + S+ SD + Sbjct: 61 AA----GYNIKLLIQDNQSTNPGALAALNKSIEQDHIFALLGPIKSTQVLAISDRVKQTE 116 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 + + G TN LTQ+G + R DS KYI E + +IA++HD +G G Sbjct: 117 LPTL-IGGTNVNLTQQGNPWLFRCRPDDSIVVKVMLKYIKEDMGLTKIAVLHDADAFGTG 175 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDF-VYYGGYYPEMGQMLRQ 235 A + D A VV + T +KD++A + + + ++YG ++ RQ Sbjct: 176 GADLIDDLAPKAGLTVVKREKYTTKDKDYTAQLLAFRVAGAEVMIHYGTNAEDVAVCQRQ 235 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 R +GL ++G ++AG AAEG+L P +A K + + Sbjct: 236 YRQLGLPYAYIGSPSSAVKDTIHLAGKAAEGILAIADATPGGSPEYTAYSEAYKKEYGEE 295 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKD-LKANGANTVIGPLNWDEKGD 348 + Y A+ LA A+ G + + + L V+G ++ GD Sbjct: 296 MDAWAAWNYDALMILAKAIHEVGP-DRNKVREAILNLRDYRGVLGIYSFSPNGD 348 >UniRef50_D2L9D5 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9D5_9DELT Length = 383 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 69/338 (20%), Positives = 134/338 (39%), Gaps = 13/338 (3%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 A+ I+ V ++SGP + G+ E N + ++ +NA GG+ G + V DD D Sbjct: 22 PAVAAEPIRFGAVLSVSGPASFLGEPEKNTIQMEVEKLNAAGGVLGRPIEVVILDDETDV 81 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 +AV ++++ + + ++G S +T + +IS A ++T+ I Sbjct: 82 NKAVLAVDRLIKKEQVAAILGPTTSGNTLAVMGKAAAAKVPLISCSA-AEKITKPVNPSI 140 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 + A D + + +++AI+ +G+ +++ + A + + Sbjct: 141 FKVAPSDRLAVARILSHAKKQ-GYRKLAILTVSDGFGQAGREVLKELIPAQGFELTADEV 199 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 + D +A + ++ D V G P + + +G+KT GV + Sbjct: 200 FGPKDTDMTAQLTNIQGTAPDAVICWGTNPGPAVVAKNRVQLGMKTPLYMSHGVASKKFI 259 Query: 258 NIAGDAAEGM------LVTMPKRYDQDPANQ---GIVDALKADKKDPSGPYVWITYAAVQ 308 +AGDAAEG+ + K D DP A + K P + Y ++ Sbjct: 260 ELAGDAAEGLLLPAGKITVAEKLPDADPEKAQLVAYAKAYEERFKAPVSTFGGHGYDSLH 319 Query: 309 SLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDE 345 A A+ GSD+P A+ L+ + G + Sbjct: 320 LAAKAVADAGSDKPQAIRDALEKTKAFPGIGGIFTFTP 357 >UniRef50_C2KVU8 Branched chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=5 Tax=Clostridiales RepID=C2KVU8_9FIRM Length = 401 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 100/405 (24%), Positives = 176/405 (43%), Gaps = 40/405 (9%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD------------------------DIKVAVVGAMSG 36 MK+ ++A ++A ++ A K+ G ++G Sbjct: 1 MKKQLSMVLAALMAASLVACGGASGEKKATEAESKANAESSGSEKSGLTWKIGGQGPLTG 60 Query: 37 PIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYV 96 A +G+ NGA AI +INA GGI G ++ + DD D ++A+ N + + G++++ Sbjct: 61 GAAVYGNAVVNGAEIAIDEINANGGINGYQIEYKKADDEHDQEKAINAYNSLKDWGMQFL 120 Query: 97 IGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYIL 156 +G S+ E + + ++SP + E+T +++ R D +QG +A+YI Sbjct: 121 VGPTTSAPAIAVGTEAEGDNMFVLSPSGSAVEVTAP--KNVFRVCFSDPAQGTKSAEYIG 178 Query: 157 ETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGE-KDFSALIARLKK 214 ++I II+D Y G+ S VV + TA KDFS + ++K Sbjct: 179 SHNLGKKIGIIYDSSDVYSSGVHDSFVAEAPKQGLEVVADEQFTADSNKDFSTQLQKMKD 238 Query: 215 ENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV-GNASLSNIAGDAAEGMLVTMPK 273 + V+ YY E +L QA ++G K F G +G+ G ++ N AEG+++ P Sbjct: 239 SGAELVFLPFYYSEAALVLTQANTMGFKPTFFGCDGMDGILNVENFDVSLAEGLMLLTPF 298 Query: 274 RYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG-------SDEPLAL 325 D +D V K K+ + Y AV ++ A+E+ G SD A+ Sbjct: 299 AADAKDDLTVNFVKNYKEKYKETPIQFAADAYDAVYAIKAAVEKAGLTPDQSVSDLGTAM 358 Query: 326 VKDLKANGANTVIGP-LNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 K + + + G + W+E GD+ V DG+ +A+ Sbjct: 359 EKAMTEISLDGLTGTGMKWNEAGDVDKEPKAV--IIKDGAYVSAE 401 >UniRef50_Q9Y8W3 Branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Aeropyrum pernix RepID=Q9Y8W3_AERPE Length = 427 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 80/369 (21%), Positives = 149/369 (40%), Gaps = 28/369 (7%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK---GDKLVGVEYDDACDPKQA 81 +IK+ V+ +SG +A+ G G A+ +IN++GG+K G KL V D A P+ Sbjct: 35 EIKIGVILPLSGRLAETGADLRRGIEFAVDEINSQGGVKACGGAKLTVVYGDSAGKPETG 94 Query: 82 VAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 A A +++ +G+ ++G SS T+ AS++ E + I+P +T+P LT+RGY+ R Sbjct: 95 AAEAERLISQEGVIALVGAYQSSVTKTASEVAERYQVPFINPDSTSPALTERGYKWFFRV 154 Query: 141 AGLDSSQGPTAAKYI-----LETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 D A +I + + AIIH+ ++G +A + + +V Sbjct: 155 TPHDEMFAAQQADFIDWLNQKYGLNLRTFAIIHEDTEWGSKVAEAWKKYFTQHGYTLVEE 214 Query: 196 DGITAGE-KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 A + + +LK N D + Y + +++ ++ + + + G Sbjct: 215 VSYHAATVTSLDSEVQKLKAANPDILLAASYIQDAILLVQTMKAQNFAPKVVLAQDAGFI 274 Query: 255 SLSNIAGDAAEGML-----VTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAV-- 307 + S ++ +G V P D+ P + + D K Y + Sbjct: 275 NPSYVSQVGKDGWYIFSREVFSPDLIDKIPRLKEVNDRYKKKYGVDLNGNSARDYTGIWV 334 Query: 308 --QSLATALERTGSDEPLALVKDLKANGANTVIGP---------LNWDEKGDLKGFDFGV 356 +L A ++ P + L+ + N + P + +DEKG + Sbjct: 335 LYYALEDACKKASPSNPEEFRRALRDSLVNLQLSPDQIIMPWKGVKFDEKGQNILGQGLI 394 Query: 357 FQWHADGSS 365 Q DG Sbjct: 395 VQMFEDGKY 403 >UniRef50_A7IE58 Extracellular ligand-binding receptor n=3 Tax=Proteobacteria RepID=A7IE58_XANP2 Length = 381 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 13/355 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M TI A +IA +S AD IK+ + SG +A G GA A++ IN G Sbjct: 1 MLPLRPTIAALLIAAGLSAAHAADPIKIGGLLETSGAVASLGQPGLEGAMLAVEQINKTG 60 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILM 119 GI G + V + D +AV +++ G I ++G + S S+ D + + M Sbjct: 61 GINGQPVEFVNVNTESDNTRAVTAVKRLIGQGDIAAIVGPMNSGSSFAIIDTVQRASVPM 120 Query: 120 ISPGAT-NPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 IS G + N L + I + D + + + RIA+++ +G Sbjct: 121 ISNGGSRNIVLPAEEKKWIFLSPLTDVLVQSVMMEDM-KKRGITRIALLNADSPFGTSGR 179 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 ++ + VV ++D + + +++ + V P +++ R Sbjct: 180 EQLEKNAASYGITVVSQQAFGNADQDMTPQLTKVRGTDAQAVVVWATGPGQAIVVKNYRQ 239 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY------DQDPAN---QGIVDALK 289 +G+ + + + +AG AA+G+ + K Y DP + + Sbjct: 240 LGIDLPLYLSQAANDFNFLRLAGPAADGIFIPSSKIYVTGALAANDPQKAVIETFAKDYE 299 Query: 290 ADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNW 343 A P + Y AV LA A+++ G+ + A+ ++ V + Sbjct: 300 AKYGKPPATFAGNAYDAVMMLAEAVKKAGATDRAAIRGAIEGLKDHVGVTAVYTY 354 >UniRef50_C6WB66 Extracellular ligand-binding receptor n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WB66_ACTMD Length = 392 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 88/340 (25%), Positives = 146/340 (42%), Gaps = 9/340 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ +G ++G + NGA+ A + NAK K+ VEYD P+QA ++ Sbjct: 40 VKIGFMGDLTGENSAIVIPPRNGAKLAFDEYNAKN--PKVKIELVEYDSQGKPEQATSLI 97 Query: 86 NKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 K V +D I +IG S ++ + + I ISP ATNP L G+ R D Sbjct: 98 TKAVGSDKISALIGPAFSGESKAIGGVLDQNKIPSISPSATNPGLAANGWSFWHRVVAND 157 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QGP A ++++ P++ ++ D Q+Y GLA +V + A V D + D Sbjct: 158 DDQGPGIADFLVKAKSPKKAFVLSDDQEYSTGLADAVAKAFEGAGVA-VEKDRFSKDASD 216 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS-NIAGDA 263 +S+++ ++ N D + YGGYY + G++L+Q R + F +G +A L A Sbjct: 217 YSSVVTKVASANPDVIVYGGYYAQAGRLLKQLRDSNVTAPFASGDGSLDAQLVSAAGAQA 276 Query: 264 AEGMLVTMPKRYDQDPAN---QGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 AEG ++ P + D K Y Y A + A+E G+ Sbjct: 277 AEGAILACPCNIPSADVTGPLKSFYDNYKKATNADPAIYATEGYDAATAYIKAIE-AGNT 335 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 + LK V P+ + G+ + ++Q Sbjct: 336 TSEKINDFLKTADFEGVSKPIKFKANGEPENNAIFIYQVK 375 >UniRef50_A1WRT6 Extracellular ligand-binding receptor n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT6_VEREI Length = 384 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 89/358 (24%), Positives = 158/358 (44%), Gaps = 11/358 (3%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R A ++AG+I++A + A + IK+ ++ G + + GA+ A K++NA GG+ Sbjct: 8 RLASLLMAGLISVA-AMPAASQPIKLGIITDRVGAAKPYAEPVLQGAQVAAKELNASGGV 66 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G + + DD P + A K+V+ G+ +++ +S+TQ A + + G ++P Sbjct: 67 LGRPIELLVEDDQGRPDLSATAARKLVDSGVAFILSISWTSATQQAQSVTVETGTPHLAP 126 Query: 123 GATNPELTQR-GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 + LT + + +T L SSQ T Y + +R+AII D G+ + +S Sbjct: 127 SNSGDTLTTQIANPNFWQTGPLASSQVSTLLAYA-RSKSFKRVAIIGDNTGLGQLMTQSF 185 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGG-YYPEMGQMLRQARSVG 240 + G++AA VV + + G A I R++ N D ++ G PE +LR R +G Sbjct: 186 KAGIEAAKIQVVSEEVVPRGANSADAQIQRVRASNPDAIFLTGILAPENTLILRAYRLLG 245 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LK +G N +++A +G++ + P Q + Sbjct: 246 LKAPLLGNFSFSNIQYASVAKGLLDGLVFIDAFDPTK-PQVQRFIATYTKAAGTAPDNIN 304 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIG----PLNWDEKGDLKGFD 353 Y V +A A+ R G + L + ++A G V+G + G GFD Sbjct: 305 AYGYDGVMLVADAIRRAGGTDKLKVRDAMQATKGFVGVLGAQGASYGF-ANGKRTGFD 361 >UniRef50_B2UH58 Extracellular ligand-binding receptor n=8 Tax=Burkholderiales RepID=B2UH58_RALPJ Length = 386 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 81/362 (22%), Positives = 149/362 (41%), Gaps = 15/362 (4%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 A DIK+ V A+SG AQ+G NG + A +INA GGI G K+ V D+ ++A Sbjct: 26 AAQDIKIGVAEALSGGAAQYGVAIRNGFQLAADEINAAGGINGSKIALVIEDEQGKKEEA 85 Query: 82 VAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 + V K++ D + V G S+S Q A I + ++ T +T G + R Sbjct: 86 INVFKKLIFQDKVAMVFGPTLSNSAQAADPIAQGAKTVVFGTSNTADGVTSIG-DFVFRN 144 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGIT 199 + ++ P + +++ +++A+++ + + + + L+ V + Sbjct: 145 SVTEADVLPATIQTVVKKAGVKKVAVLYGNDDVFTKSGYDNFKKALEDLKIPVTTTETFA 204 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+ DF A + ++K N D + E G ++ QAR +GL +G G+ + + ++ Sbjct: 205 KGDVDFKAQLTKIKATNPDAIVLSALIAEGGPIMVQARQLGLNVPIIGGNGMNSVKVFDL 264 Query: 260 AGDAAEGMLVTMPKRYDQDPA-NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 A D ++ + V P + A N + A A K + Y A+ + AL+ Sbjct: 265 AKDKSDNLWVGSPWSIENHTAENSKFITAYTAKYKAAPDQFAAQAYDAMYIASKALKTVK 324 Query: 319 -----SDEPLALVKDLKANGANTVIGPLNW---DEKGDLKGFDF---GVFQWHADGSSTA 367 + A+ L G + +G G+D + +G T Sbjct: 325 FSGKLEADRKAIRDALPGVKHIGATGAFAFRQVTARGKPAGYDAVQTPIVSVTKNGKYTI 384 Query: 368 AK 369 K Sbjct: 385 EK 386 >UniRef50_C9NK09 Extracellular ligand-binding receptor n=3 Tax=Streptomyces RepID=C9NK09_9ACTO Length = 411 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 92/358 (25%), Positives = 149/358 (41%), Gaps = 21/358 (5%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 + + V ++G ++ G N A K N + G + DD P A Sbjct: 41 TVVIGVDAPLTGSLSALGQGIKNSVDLAAKTANKNNEVPGIEFKIEALDDQAVPASGQAN 100 Query: 85 ANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ----------RG 133 A K+V N + +G L S Q ++E + +SP TNP L+Q R Sbjct: 101 ATKLVGNKDVLGAVGPLNSGVAQSMQGVFEKADMAQVSPANTNPALSQGDNWGKGDSKRV 160 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 ++ RT D QG AA+Y+ K +++ ++ DKQ YG GLA VV Sbjct: 161 FKTYFRTCATDVVQGKFAAQYLFNDAKKKKVYVVDDKQTYGAGLAAIFSAEFTRLGGKVV 220 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 D +T E DFS+ ++K D VYYGG YPE G + Q + G K MG +G+ + Sbjct: 221 GTDHVTVKETDFSSTADKVKSSGADSVYYGGQYPEGGLLSDQIKKTGAKIPTMGGDGIYD 280 Query: 254 ASLSNIAGDAAEGMLVTM-PKRYDQDPANQGIVDALKA-DKKDPSGPYVWITYAAVQSLA 311 + + +G+A +G T + P + + A KDP Y +Y A ++ Sbjct: 281 PAFISASGEANDGDFATSVGYPVEALPTAKQFISDYNAGGYKDPFAAYGGYSYDAGWAII 340 Query: 312 TALERTGSDE--------PLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 A++ +D + + + + V G +++DE GD V++ Sbjct: 341 QAVKAVVADNDGKLPEDARAKVTEAMAKVSFDGVTGKVSFDEFGDTTNKQLTVYEVQK 398 >UniRef50_C0Z561 ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z561_BREBN Length = 395 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 79/372 (21%), Positives = 145/372 (38%), Gaps = 16/372 (4%) Query: 10 AGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVG 69 A A + A D IKV + +++GP + G E +K+IN GG+ G ++ Sbjct: 28 ATPAAESGPGGASKDPIKVGAIFSLTGPNSPLGVPEKQAVELLVKEINGAGGVDGRQVEI 87 Query: 70 VEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPE 128 + DD D +AV K+ + + + V+G S + ++ E + +IS A + Sbjct: 88 IFEDDKSDNTEAVKAIKKLASKEKVVAVLGSSGSGPSLGMAEYAAAEKLPLIS-MAAADQ 146 Query: 129 LTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAA 188 +T +I +T D KY+ E +IA ++D YG G +Q Sbjct: 147 ITNPVRANIYKTPHTDVHGTKRIFKYLKEK-GITKIATLNDSNPYGSGWTTQLQKYAPEY 205 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 +V + + S+ + ++K + + G P ++++A+ + L + Sbjct: 206 GITIVAEEKYGTKDPSMSSQLTKIKGTDAQALIVAGTNPGPATIVKEAKQLNLTIPIISS 265 Query: 249 EGVGNASLSNIAGDAAEGMLVTMPK------RYDQDPAN---QGIVDALKADKKDPSGPY 299 G N+ + GDA EG+L+ K DP + + VD +A + Sbjct: 266 HGSANSKFLELIGDAGEGVLMVAGKLLIPEQVAADDPQSAIIKKFVDGYQAAYNTHPDGF 325 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW--DEKGDLKGFDFGVF 357 Y + L L++ GS + L + L+ V G + D+ L + Sbjct: 326 AGYGYDGLNLLVEGLKQAGS-DTSKLGEVLEKVKYVGVTGEFKFTADDHNGLTEDSMIMV 384 Query: 358 QWHADGSSTAAK 369 + DG K Sbjct: 385 EVK-DGKFQLVK 395 >UniRef50_D1SZL8 Extracellular ligand-binding receptor n=2 Tax=Comamonadaceae RepID=D1SZL8_9BURK Length = 387 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 84/367 (22%), Positives = 148/367 (40%), Gaps = 9/367 (2%) Query: 3 RNAKTIIAGMIALAISHTAMA---DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 R A M A+S + D +K+ V +SGP+A G NG + A+ ++N Sbjct: 10 RRAALAGLAMACAALSLAGCSRVPDTVKIGVAQPLSGPLAALGQDMLNGVKLAVDELNQS 69 Query: 60 GG-IKGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 G + G ++ V DD D VA ++V G+ V+GHL S + A+ IY +G Sbjct: 70 GFMVDGKRVTLEVVAQDDRADAATGKTVAQQLVESGVVAVVGHLNSGVSIEAAPIYAAKG 129 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 I ++ +T+P T+ G+ R D+ Q + + A++ D YG+G Sbjct: 130 IPQLAI-STHPHFTELGFPGTFRLVANDALQARAMGSFAATQLSASSYAVLDDGTPYGKG 188 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + V + DF AL +L++E +D + ++ ++ Sbjct: 189 LADGAAAQIAQDKRKVSVRESFDDKTTDFKALAGKLQQERVDVIVTTLNDFQVLALIDAL 248 Query: 237 RSVGL-KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 + +G + + + A + + A + +D K Sbjct: 249 VQANYTRVSILGGDTIKTTDMLKGDRKLAAIYATSPVLEAREFIAGRQFLDRYDRAFKRA 308 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGDLKGFDF 354 +Y A L+ A+++ S +P + K L A NG V G + WD+KG+ + Sbjct: 309 PAYGGHYSYDATYVLSAAIQQAKSADPREITKALHAINGYAPVTGTMKWDDKGEQRYGAV 368 Query: 355 GVFQWHA 361 GV+ A Sbjct: 369 GVYGMRA 375 >UniRef50_A0RN18 Branched-chain amino-acid ABC transport system periplasmic binding protein n=31 Tax=Campylobacteraceae RepID=A0RN18_CAMFF Length = 372 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 98/374 (26%), Positives = 176/374 (47%), Gaps = 15/374 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ + + IAL + + MA +IK+ VV ++G +A +G + G A K Sbjct: 1 MKKIS---LVASIALVAATSLMAKEIKIGVVMPITGAVAAYGQTAWAGIEMANKL--EPT 55 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GD L + D+ D + ++V +D + +IG + + +TQ I +++ + M Sbjct: 56 LKNGDTLKLILVDNKGDKVETTTATTRLVSDDKVTGLIGAMVTGNTQQVLQIADEKKVPM 115 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR-IAIIHDKQQYGEGLA 178 I+P AT +L R ++ R +DS QG + A Y +++ + + ++ Y GLA Sbjct: 116 IAPAATADKLLDRA-KYGARVTFMDSFQGTSFATYAAKSLGLKTAVVVVDQSTSYSIGLA 174 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 ++ + + V+ I++G+KDF A+++++ N VY Y+PE ++RQAR Sbjct: 175 KAFKKQYEKDGGKVLKELKISSGDKDFKAIVSQIGSLNPSIVYMPFYHPEAALVVRQARQ 234 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP--ANQGIVDALKADKKDPS 296 +GLKTQF +GV N + +AGDA+ G T P ++ V A +K D + Sbjct: 235 IGLKTQFASGDGVSNDTFIELAGDASNGYFYTDAFDSSNPPTDKSKEFVAAYTKEKGDGN 294 Query: 297 GP-YVWITYAAVQSLATALERT-GSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFD 353 P + + + + A+ R ++ + K +K V G +N D KG+ Sbjct: 295 VPGFTALGADSYFLMVDAMNRCENPEDRECVNKKIKETKNFEGVSGIINIDSKGNAIRS- 353 Query: 354 FGVFQWHADGSSTA 367 V + DG + Sbjct: 354 -VVIKEVKDGRAVY 366 >UniRef50_A0LKN5 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKN5_SYNFM Length = 380 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 153/373 (41%), Gaps = 11/373 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M+ IA A+A AD I++A + A++G G R A+++INA+G Sbjct: 11 MRGAFWMFIALAAAVAAFPAQAADVIEIAAIYALTGEATDTNATSVRGVRIAVEEINARG 70 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G +L +D+ P + A + + ++G S + P + + + G+ MI Sbjct: 71 GVLGRRLRLEIHDNRSTPIGSHLAAERAADSDAVAILGASRSPHSLPIAKVAQARGVPMI 130 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIA-IIHDKQQYGEGLAR 179 + +T+P++T+ G I R D QG A++ E +K ++ +Y G+ + Sbjct: 131 TNHSTDPDITRVGN-CIFRVCFTDEVQGAALARFAREDLKASTATLFVNLASEYSTGICQ 189 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 Q + V+ + ++DF L+ + D ++ GY E G + A+ Sbjct: 190 VFQKHFEQLGGRVILVREYKSRQRDFEDLVRDAGRVQADVLFLSGY-DESGLIAVLAQDK 248 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPS--G 297 G+ ++F+G +G+ N S GD + + D A D G Sbjct: 249 GVTSKFVGGDGLANPSFLAKGGDRLKRAYYSSHWTPAMDSRRSR---EFTARYGDVPDFG 305 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGV 356 + Y AV LA A++R GS E + L V G ++++ GD + Sbjct: 306 TGTALAYDAVMVLADAIKRAGSAERGRIRAALAETRSFEGVTGVISFNGHGDPV-KSVVI 364 Query: 357 FQWHADGSSTAAK 369 + DG K Sbjct: 365 MEVR-DGRPHYLK 376 >UniRef50_D2RFJ3 Extracellular ligand-binding receptor n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFJ3_ARCPR Length = 457 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 82/390 (21%), Positives = 156/390 (40%), Gaps = 33/390 (8%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MKR A + + L D I + + +G ++ G + D+NA+G Sbjct: 1 MKR-AFCVAMVALLLLTPTVLAKDAIIIGFTMSQTGKYNSESKEQYQGLKLWADDVNAQG 59 Query: 61 GIKGD------KLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYE 113 GI + V YDD + + K++ D ++I S T A+ I E Sbjct: 60 GIYVKSLDKKLPVKLVFYDDESSKDRVQQLYAKLITEDNADFLISPYSSGLTASAAIIAE 119 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYI-LETVKPQRIAIIHDKQQ 172 G +MI+ GA + + +GY+HI + S A + +R+AI+++ + Sbjct: 120 QYGKIMIATGAASDSIFNKGYKHIFQVYTPASRYLTGAIDMLKAADPNAKRVAIVYENSK 179 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 + + + +V++ + +VV F+ ++G DF++ I ++ N D + GG++ + Sbjct: 180 FAKDVCTAVKEYAEENGFDVVLFEPYSSGTTDFTSFINKILASNPDAIIGGGHFADGENF 239 Query: 233 LRQARSVGLKTQFMG-PEGVGNASLSNIAGDAAEGMLVTMPKRYDQD------------- 278 +Q +K + + + I GDAA + VT P +++ Sbjct: 240 AKQLYEKRVKVKLISLLVAPAVPEFAEI-GDAA--LYVTGPSQWEPQAKYSKEIAEKLGV 296 Query: 279 ----PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA 334 P + V+ K+ G + Y A L A+E G+ + + + L+ Sbjct: 297 EWYGPTVEQFVEQYKSAYGYEPGYHAAGGYVAGLILQKAIEDAGTLDTEKVKEALEKMDI 356 Query: 335 NTVIGPLNWDE---KGDLKGFDFGVFQWHA 361 T G +++D G KG + QW Sbjct: 357 MTFYGRISFDTGEYYGRQKGHEMVYLQWQK 386 >UniRef50_C4X495 ABC transport system periplasmic binding component n=8 Tax=Proteobacteria RepID=C4X495_KLEPN Length = 378 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 88/353 (24%), Positives = 158/353 (44%), Gaps = 12/353 (3%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 A + + AL + +A A +IK+ VV +SG ++ +G G I+ I Sbjct: 7 KASLMATLVAALVGASSAQAAEIKIGVVLPLSGALSGYGQPSQKGLDI-IQAITPTLK-N 64 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 GD + + DD D +A ++V+ D + VIG + SS+T + I +D ++S Sbjct: 65 GDTIKLIVIDDKSDKVEAANAMQRLVSSDKVDAVIGEVTSSNTLAMTKIADDSKTPLVSS 124 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSV 181 ATN +T R + ++ R DS QG A +K + AI+ D Y GLA++ Sbjct: 125 TATNDRVT-RNHPYVSRVCFSDSFQGVVGANLASRDLKAKTAAIVFDSSNDYSVGLAKAF 183 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + + G KDF A +A +K +N+D +Y YY E + Q++ +GL Sbjct: 184 RTQFLKNGGTIPIEVQAPGGSKDFKAQLASVKAKNVDMIYMPIYYTEGALIAVQSKQLGL 243 Query: 242 KTQFMGPEGV-GNASLSNIAGDAAEGMLVT---MPKRYDQDPANQGIVDALKADKKDPSG 297 +G +G+ + ++ DA G + T P +Q PA + + A +A + P+ Sbjct: 244 NKPVVGGDGLAADQVFFDVGKDAVNGYMTTDYYSPNAKEQTPAGETFIKAWEAKYQQPTH 303 Query: 298 PYVWITYAAVQSLATALER-TGSDEPLALVKDLKAN-GANTVIGPLNWDEKGD 348 + + A + A+ + + + + + + ++A V G L + GD Sbjct: 304 TWGAMAADAYNVIVNAMNQCSDPHDRVCVNEKIRATKDFQGVTGTLTL-QNGD 355 >UniRef50_B8FZ96 Extracellular ligand-binding receptor n=3 Tax=cellular organisms RepID=B8FZ96_DESHD Length = 380 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 106/375 (28%), Positives = 168/375 (44%), Gaps = 15/375 (4%) Query: 2 KRNAKTIIAGMIA--LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 K A I G+ L + +++I + V A D+ G A+++IN + Sbjct: 9 KSLAMIFILGLSLWPLGCTQVNPSEEIFIGVAWP----FASLDDLFAEGLELAVQEINEQ 64 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG++G KL V+ DD + ++ +A+A ++ GI+ VIGH S + PA+ IY+ G++ Sbjct: 65 GGVQGRKLSLVKADDEAELEKGLAIAQAFADNAGIQAVIGHRNSFISIPAASIYDQAGLV 124 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 M+SP +T+P+LT GY H+ R D A Y+ E +R+ I + YG GLA Sbjct: 125 MLSPASTSPDLTDHGYIHVFRNIPSDQEIARQLAIYLAEQ-GHERMVIYYTDDSYGNGLA 183 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ-MLRQAR 237 + +D +A +V KD L + + +D ++ G L A+ Sbjct: 184 NAFEDYARAQGITIVDRFNYYGNLKDLERLYDKWQAFGMDGIFIAKTATGGGTEFLVDAK 243 Query: 238 SVGLKTQFMGPEGVGNASL---SNIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKK 293 SVG++ + SL G AEG+LV + D Q V+A + + Sbjct: 244 SVGIEVPLIAGNSWDALSLTEDIENIGMTAEGLLVGSFFNPQRPDSRTQDFVEAFRREYG 303 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGF 352 P Y Y AV LA ALE++ P L + L+ G V+G +D +GD G Sbjct: 304 QPPTSYAAAGYDAVILLAEALEKSDLTHPATLAQGLRDLGPWEGVMGMHRFDGRGDDIG- 362 Query: 353 DFGVFQWHADGSSTA 367 D V + DG Sbjct: 363 DLVVLKKMKDGRFEY 377 >UniRef50_Q2Y4K2 Putative amino acid ABC transporter, solute-binding protein n=1 Tax=uncultured archaeon RepID=Q2Y4K2_9ARCH Length = 490 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 78/397 (19%), Positives = 148/397 (37%), Gaps = 39/397 (9%) Query: 5 AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 A ++A ++++ T A+D+ + V+ SG + +G E + + A+K++N GG+ G Sbjct: 13 ATFVLAAVLSMG---TVGAEDVTIGVLYPFSGDLGTYGKPETDAMKLAVKEVNENGGVLG 69 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 +L + D +AVA +++++ + +IG S + + G+L ISP Sbjct: 70 GRLKLLIKDTETSEDEAVAKVHELLDWYNVSVIIGTAGSETCKAIIGYTTSNGVLQISPS 129 Query: 124 ATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 T E T RT D+ QG A+ ++ + + + YG G ++ Sbjct: 130 VTGVEFTTYPDNDLFFRTCPSDALQGIAMARLAIQQ-GYKTASTLVVWNPYGVGFEKAFT 188 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL- 241 K V+ F++ + ++ N D V Y ML+ A G Sbjct: 189 KEFKTLGGKVLQSVKYDPDTTTFNSEVEQVTAANPDCVMLCAYPETGSGMLKTAYKNGYM 248 Query: 242 -KTQFMGPEGVGNASLSNIAGDAAEGMLVTM----PKRYDQDPANQGIVDALKADKKDPS 296 ++ EG+ + L+++ G G + + PA + A+ Sbjct: 249 DSIDWLLSEGLKSDGLADMVGKDEAGNYIIAGLKGTTPDSRGPAYETFRQKYLAEYGKVP 308 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLK-------------------------- 330 Y +Y AV +A A+E+ G A+ L+ Sbjct: 309 EAYCANSYDAVAVVALAIEKAGDTSGTAIRDSLRDVANPPGNKDVSDIGEALDTIRKGFY 368 Query: 331 ANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 + G + +DE GD+ G F + +G Sbjct: 369 SINYLGASGEITFDEHGDVMG-SFCEWTITDNGRVVY 404 >UniRef50_D1C6F1 Extracellular ligand-binding receptor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6F1_SPHTD Length = 457 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 84/375 (22%), Positives = 156/375 (41%), Gaps = 33/375 (8%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 + TA + +K+ ++ +G ++ +G +N A A+++IN+ GG+ G + V DD Sbjct: 68 TPTASGEALKIGMLAPFTGDLSDFGPAFWNAAMLAVEEINSAGGVLGQPVELVRADDGTS 127 Query: 78 PKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASD-IYEDEGILMISPGATNPELTQ-RGY 134 P+Q V A ++V + + +IG S T P ++ + GI+ ISP +T+P LT Sbjct: 128 PQQGVEEARRLVEVERVSAIIGAAASGVTLPVAESVTGPSGIVQISPASTSPALTDANDN 187 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + RT D++QG A+ E Q ++ YG+GL+ + V+ Sbjct: 188 DFLFRTTISDAAQGVVLAQLAQEQ-GFQTACTMYTNNAYGQGLSEVFAREFERLGGQVLA 246 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + ++A +A + N D + Y LR+A GL F+ +G + Sbjct: 247 QVPHEQEQASYAAELATCTEGNPDVLAAISYPESARVYLREAVEQGLVENFLFVDGTKSE 306 Query: 255 S-LSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 +++ D EGM T P D + + +A + P P++ +Y AV +A A Sbjct: 307 EQFADLGWDVFEGMWGTAPGALDTEVGDAFDARYEEAYGRRPELPFLRESYDAVYVIALA 366 Query: 314 LERTGSDEPLALVKDLKAN----------------------------GANTVIGPLNWDE 345 ++ GS +P A+ ++ P ++D+ Sbjct: 367 AQKAGSTDPAAIRDAIREIANPPGETVTPGSEGWARALELIAAGEDINYEGAASPADFDD 426 Query: 346 KGDLKGFDFGVFQWH 360 GD+ V++ Sbjct: 427 NGDVLTGAIEVWRVQ 441 >UniRef50_A6UKD7 Extracellular ligand-binding receptor n=2 Tax=Sinorhizobium RepID=A6UKD7_SINMW Length = 390 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 78/373 (20%), Positives = 160/373 (42%), Gaps = 12/373 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M + +K +A S + ADD I + +M+G A +NGA+ A+K +N Sbjct: 1 MIKTSKLFLAAAGIALASSASFADDDKIVIGGALSMTGIQAPLDTPGYNGAQVAVKFLND 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G ++ + D DP VA ++++ G + ++ PAS + G++ Sbjct: 61 NGGVLGKQIEFINIDGKSDPVTVGNVAVELIDKGAQVIVAPCDFDFGSPASREAQSAGLV 120 Query: 119 MISPGATNPELTQRGY-QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEG 176 IS A++P + + +++ G TAA + ++ + ++ D+ Y + Sbjct: 121 GISTCASDPLYSSWSLGDKQFTLSMWNTTMGATAADFAVKEKGWKTAYVVTDQFIAYTKS 180 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKK--ENIDFVYYGGYYPEMGQMLR 234 L++ + KA ++ D T G+ +FSA +ARL+ + D ++ Y ++G ++R Sbjct: 181 LSKYFVEQFKANGGEILLEDTYTNGDNNFSAQLARLQALGKKPDVIFVSSYGTDIGVIIR 240 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY---DQDPANQGIVDALKAD 291 R VG +G + + ++ G+ + + + + P ++ Sbjct: 241 ALREVGYDAPVLGGDAYDDPAMHQALGEQFGNHVYFVTHTWMGPEAHPEMPKFIELYTEM 300 Query: 292 KKDPSGP-YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW--DEKGD 348 +V + + LA A++ G+ E AL K L+ + G L++ +E+G Sbjct: 301 FGKAPDTSFVSTGWDTIMLLAEAIKAAGTTEGAALAKALEDGQFKLLTGDLDYGTNEEGH 360 Query: 349 LKGFDFGVFQWHA 361 + V + A Sbjct: 361 VPNKAAAVIELKA 373 >UniRef50_D1U5A7 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5A7_9DELT Length = 376 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 85/367 (23%), Positives = 142/367 (38%), Gaps = 11/367 (2%) Query: 5 AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 A +I A+ + I V G ++G ++ G NGA A++ IN GG+ G Sbjct: 9 ALLTALCLILFALPGCGDSSPILVGFSGQLTGKVSDMGVGGRNGALLAVEHINKAGGVNG 68 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 L V DD + A+A +++ G+ +IGH+ SS + A + GI++ISP Sbjct: 69 RPLKLVAEDDGNTAEGALAADTALIDAGVVAIIGHMTSSQSMAALPYVNESGIILISPTT 128 Query: 125 TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ--QYGEGLARSVQ 182 + P LT + R + Q A Y + + IA I + Y + Sbjct: 129 STPLLTGIK-DNFTRVMVENPVQSRALATYARTILDIRTIASIMETDNLSYSMTFEETFT 187 Query: 183 DGLKAANANVVFFDGITA-GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + + +A G +++A++A L++ N D + + + + RS G+ Sbjct: 188 SVFEQLGGTFLSSFAYSASGATNWTAIMAELQRLNPDAILLTCPAQDFVTLAQNIRSSGI 247 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYV 300 + L G EG + + D PA + A + Sbjct: 248 TARLFSGAWAYTDKLLLWGGRDIEGSIFVIDFASDNPSPAFTSFIKAYETRFGSSPNFAS 307 Query: 301 WITYAAVQSLATALERT-GSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 Y +V +LA L++T GS E L+ + V G + DE GD+ F V Sbjct: 308 AFAYESVLALANGLKKTDGSSEG--LLAAMTSGERIQGVTGSFSLDEYGDVTREVFIV-- 363 Query: 359 WHADGSS 365 DGS Sbjct: 364 TVRDGSF 370 >UniRef50_UPI0001B5404D ABC transporter ligand-binding protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5404D Length = 391 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 99/341 (29%), Positives = 153/341 (44%), Gaps = 9/341 (2%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A +A G ++G A G GA+ A+ N G ++ E+D P + Sbjct: 48 AQCAPTSIAYAGTINGANAALGQNILKGAKLAVDQHNKAN--PGCQVKLAEFDTEGTPDK 105 Query: 81 AVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A + +IVN GI VIG S ++ A +I+ G++ ++P ATNP L Q G++ R Sbjct: 106 APGIVTQIVNTPGIIGVIGLPFSGESKAAGNIFNSAGLVAVTPSATNPSLAQNGWKTFFR 165 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 G D++QGP AAK+I +K ++ +I D +YG GLA S +KA D + Sbjct: 166 ALGNDNAQGPAAAKFITGELKANKVCVIEDDSEYGTGLAAS---TIKALGDKASCQDKVK 222 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 + DFSA++ ++K E D ++Y GYY E +Q G+K +F+GP+GV + Sbjct: 223 TKQTDFSAVVNKIKGEKPDAIFYSGYYQEAAPFAQQLNDAGVKAKFVGPDGVKDDLFVKG 282 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 AGDAA T P DA KA G Y Y L ++ G Sbjct: 283 AGDAAANAYFTCPCVPAD--QFTKFTDAYKAATGVDPGTYSPEAYDVATILLKGID-AGK 339 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 + L+ +K + WD+ G+L ++ Sbjct: 340 KDRAGLLDFVKTYDGQGITKHFKWDDHGELSATTVWTYKVE 380 >UniRef50_A7HUK3 Extracellular ligand-binding receptor n=6 Tax=Alphaproteobacteria RepID=A7HUK3_PARL1 Length = 403 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 83/383 (21%), Positives = 147/383 (38%), Gaps = 19/383 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD---DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 MKR A ++ G AL + A A+ I++ +++G + G NG A+K IN Sbjct: 1 MKRVAASLFLGT-ALLWAGAAPAEEIGTIRLGAAVSLTGKYSSNGAFTRNGYDLAVKRIN 59 Query: 58 AKGGI--KGDK--LVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIY 112 +GG+ G + L + YDD P + + +++ DG+KY++G S T+ + + Sbjct: 60 EEGGVTVAGKRYNLAVIYYDDESTPARGAQLVERLIQQDGVKYLLGPYSSGLTEAIAPVT 119 Query: 113 EDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYIL---ETVKPQRIAIIHD 169 E G+ M+ L ++GY+++ A + E R+A+ + Sbjct: 120 EKYGVPMVEANGAAVSLFRKGYRYLFAVLSTTDQYLRGAVELAASVNEDPSKLRVAMAFE 179 Query: 170 KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEM 229 + + + V + +V D + D SA +++ K D + G+ Sbjct: 180 NDPFSQDVREGVMEDAAKFGMKIVIDDKLPPELNDMSATLSKAKVLKPDLLLVSGHDKGA 239 Query: 230 GQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGI----- 284 ++RQ + + +A ++ G AE L ++ Sbjct: 240 ALVVRQLADQRVDVPMVAITHCDSAQIAEKFGKIAEYTLCAAQWASTLKYSDALFGSAAD 299 Query: 285 -VDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 + + + AAVQ A A ER GS EP A+ L T GP+ + Sbjct: 300 YAALYEETYGHAAPYQAAESSAAVQVFADAFERAGSLEPDAVRDALAETDIKTFYGPVKF 359 Query: 344 DEKGDLKGFDFGVFQWHADGSST 366 DE G +FQ DG Sbjct: 360 DETGKNISKPTVLFQVQ-DGKYV 381 >UniRef50_B3E1S6 Extracellular ligand-binding receptor n=18 Tax=Deltaproteobacteria RepID=B3E1S6_GEOLS Length = 382 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 85/374 (22%), Positives = 150/374 (40%), Gaps = 19/374 (5%) Query: 1 MKRNAKTI-IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK+ +A M+ + + A IK+ + +++GP + G+ E + D+NAK Sbjct: 1 MKKLVMVCSLAAMLLCSATMALAAGTIKIGGLFSVTGPASFLGEPEKKTLEMLVADLNAK 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G KL V YD A D +AV +A K++ ND + +IG + + + E E I Sbjct: 61 GGINGQKLEAVIYDTAGDATKAVQLATKLIKNDKVVAIIGPSTTGESMAVLALTEKEKIP 120 Query: 119 MISPGATNPELTQ--RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 +IS A ++T+ + + +T D +Y VK + +AI+ +G Sbjct: 121 LIS-CAAGIKITEPAKDRKFTFKTPANDHVAVEKILQYAAR-VKQKNLAILTVTDGFGAS 178 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 ++ VV + + D + + +++ D + G P + + Sbjct: 179 GREQLKVSAAQKGFKVVADETYGPKDTDMTPQLTKIRSSKADAIICWGTNPGPAIITKNI 238 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGD-AAEGMLVTMPK--RYDQDPAN-------QGIVD 286 + +G+KT GV + +A AAEG+++ K YD P N + Sbjct: 239 KQLGIKTPVYMSHGVASKKYIELASPAAAEGIMLPAGKLAVYDVLPKNDPQQKLLREYDA 298 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDE 345 A K + + Y A + A+ G+ P + L+ +V G N Sbjct: 299 AYKKTHGVEASTFGGYAYDAFLLVTNAIRTKGAT-PAQIRDGLEQTKKLVSVSGVFNMSA 357 Query: 346 KGDLKGFDFGVFQW 359 D G D F+ Sbjct: 358 N-DHNGLDLSAFEM 370 >UniRef50_A0LQN2 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LQN2_SYNFM Length = 393 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 66/370 (17%), Positives = 137/370 (37%), Gaps = 26/370 (7%) Query: 1 MKRNAKTIIAGMIALAISHT-----------AMADDIKVAVVGAMSGPIAQWGDMEFNGA 49 MK+ + A + A + K+ V +++G + G+ E A Sbjct: 1 MKKRRNWLAAALTICTFLGALFAPIIGPNVLAAPEPYKIGAVFSITGVGSFLGEPEKKTA 60 Query: 50 RQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPA 108 +IN +GGI G + + YDD D + K++ D + +IG S + Sbjct: 61 EMIRDEINKQGGINGHPVELIIYDDESDTTKCTLAVKKLIKKDEVPVIIGPTRSGESIAV 120 Query: 109 SDIYEDEGILMISPGATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII 167 + + E+ + +IS + +T + + + AG D+ Y+ + +++AI+ Sbjct: 121 ATVAEESKVPLISCATSYKIVTPIESRKWVYKVAGSDAHVVGKMYDYM-KGKGVKKVAIM 179 Query: 168 HDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYP 227 D YG + +V + + D +A + +++ V P Sbjct: 180 TDSSGYGASGREELLRLAPEYGFTIVADERFDPKDTDLTAQMTKIRGTQPQAVVNWSIGP 239 Query: 228 EMGQMLRQARSVGLKT-QFMGPEGVGNASLSNIAGDAAEGMLVTMPKR------YDQDPA 280 ++ R +G+ G G+ +AG AAEG+L+ + + D P Sbjct: 240 TQILAIKTWRDLGMDAIPLFQSHGFGSLKNLELAGKAAEGVLLPLARVNVGSLLPDSQPQ 299 Query: 281 NQ---GIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANT 336 + A + K+P + + ++ AL+ G +P + ++ G Sbjct: 300 KKIILEYTRAYETLYKEPISSFGGHAWDSMHLAMAALKAVGP-DPAKIRDHIEQTKGFVG 358 Query: 337 VIGPLNWDEK 346 + G N+ + Sbjct: 359 MHGIFNFSPQ 368 >UniRef50_Q6AL52 Related to branched-chain amino acid ABC transporter, periplasmic substrate binding protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AL52_DESPS Length = 380 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 82/383 (21%), Positives = 152/383 (39%), Gaps = 21/383 (5%) Query: 1 MKRNAKTIIAGMIALAISHTA--MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 MK+ + A + L +S A ++IKV + A++GP + G E A+ ++ IN Sbjct: 1 MKKEIIHLFAVAVLLLMSAGASWATENIKVGAILAVTGPASFLGGPELKSAKMLVQRINR 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGI 117 GGI+G K+ + D ++A++ A +++ + + +IG S T + + Sbjct: 61 AGGIQGKKIELIVRDSGGSSEKAISFARQLIEEKEVFAIIGPSTSGETLKIKKLCQRSKT 120 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 L++S ++ + ++ +TA D Y+ + ++IA++ +G+ Sbjct: 121 LLLS-CSSADRIVFPLASYVFKTAPSDGLAVEKIFIYM-QKKGIKKIALLSGNTGFGKAG 178 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKE-NIDFVYYGGYYPEMGQMLRQA 236 R + K VV + D +A++A++K + I+ V P +L+ Sbjct: 179 KRQILKRAKKYGIEVVSSEVYDKNATDLTAIVAKIKSQPGIEAVVNWSVVPAQSIVLKNI 238 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTM---------PKRYDQDPANQGIVDA 287 R G G N AG AAEG+L P D+D Q + Sbjct: 239 RQAGWDVPIFQSHGFANIKYVQAAGAAAEGVLFPASRLIIAKQLPAGVDKDFLLQ-FKND 297 Query: 288 LKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEK 346 + + + +Y A+ LA A+++ G + + L+A G G N+ K Sbjct: 298 YENSYGEEVSTFGGHSYDALLLLANAIKQVG-LDREKVRGVLEATRGFMGTAGEFNFSAK 356 Query: 347 GDLKGFDFGVFQW--HADGSSTA 367 D G F DG Sbjct: 357 -DHSGLSIEAFTMLTVEDGKFVP 378 >UniRef50_C0QMD9 ABC-typ branched-chain amino acid transport system, periplasmic substrate binding component n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QMD9_DESAH Length = 385 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 106/373 (28%), Positives = 179/373 (47%), Gaps = 16/373 (4%) Query: 1 MKRNAKTIIAGMIALAISHT----AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M + ++ ++ L++ T +A+ I V G+ +G A +N ++ A+ + Sbjct: 1 MMKKCIVLLFTVLFLSMGQTCLANGVAEGIHVGNAGSFTGDAAAPCMEIYNSSQLAVDEW 60 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKY-VIGHLCSSSTQPASDIYEDE 115 NA+GGI+G ++ + DDA DP Q + VA K +D + Y V+G S Q + IY Sbjct: 61 NARGGIQGVQIEHIMGDDALDPAQGIHVARKFTSDPLMYGVVGPPVSHIAQASLKIYGQN 120 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 + I+ A+ PELT+ GY+H R + + G A +I +K ++IAI+++K Y E Sbjct: 121 DLACITTAASKPELTESGYKHFFRVNARNDAHGLNCALFIKRNLKARKIAILNEKVAYCE 180 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGY-YPEMGQMLR 234 LA+ L + D I AG KD+SA++ ++K D +++ P+ +R Sbjct: 181 NLAKQTIKSLNGLGITEIMNDTIVAGAKDYSAVLTKVKAYKPDVLFFIATAAPDQAIGVR 240 Query: 235 QARSVGLKTQFMGPEGVGN-ASLSNIAGDAAEGMLVT--MPKRYDQDPANQGIVDALKAD 291 QA+ +G+ F G EG + + AA+G V P Y D A + V +A Sbjct: 241 QAKELGIDAIFFGTEGARDKKDFIEASEGAAQGAYVYHFSPDIYSIDEAGE-YVKKYEAK 299 Query: 292 KKDPSGPYVWITYAAVQSLATALERT---GSDEPLALVKDLKANG-ANTVIG-PLNWDEK 346 SG + Y A+ L TA++ G + ++ L A ++G P+++DEK Sbjct: 300 YGKLSG-FGPPAYEAMNILLTAIDLAAKDGKIDREEVIFQLAAIKAYKGILGFPISFDEK 358 Query: 347 GDLKGFDFGVFQW 359 GDL G F+ Sbjct: 359 GDLLGSATYFFKV 371 >UniRef50_A8ZVT4 Extracellular ligand-binding receptor n=2 Tax=Desulfobacterales RepID=A8ZVT4_DESOH Length = 383 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 76/382 (19%), Positives = 145/382 (37%), Gaps = 19/382 (4%) Query: 1 MKRNAKTIIAGMIALAISHT---AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 MK++ A ++ + + A +DD +V + +++G + G+ E A + IN Sbjct: 1 MKKSILATAAVLVVMLMCGGMLYAASDDYRVGCIFSVTGKASWLGEPEKKTAEMLAEKIN 60 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEG 116 A GGI G KL DD D +AV A K++N D + +IG S +T + ++ Sbjct: 61 AAGGINGHKLKLYIEDDQGDNTRAVNAAKKLINRDKVCAIIGPSVSGATMAILPVMQEAE 120 Query: 117 ILMISPGATNPELTQRG-YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 I ++S A + + I +T DS ++++ + + +I +G Sbjct: 121 IPLVSCAAAAVIVEPVAERKWIFKTPQKDSDAVRRIYEHMISR-GIKDVGLITGTTGFGN 179 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 ++D N+V + + D +A + ++ V P + + Sbjct: 180 AGRTQLKDLAPEYKMNIVADETYGPADTDMTAQLVNIRNAKAQAVINWSIVPAQSIVPKN 239 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN---------QGIVD 286 + + + G GN AG+AAEG++ + D + Sbjct: 240 MKQLNMTIPLYQSHGFGNIKYVEAAGEAAEGIIFPAGRLLAVDTLSGDNPQKALLAAYKA 299 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEK 346 +A +P + Y A+ + ALE+ G D+P + ++ G + + Sbjct: 300 EYEARYNEPVSTFGGHAYDALSIVVKALEKAG-DDPAKIRDTIETIEFVGTGGVFKFSAE 358 Query: 347 GDLKGFDFGVFQW--HADGSST 366 D G D F+ DG Sbjct: 359 -DHTGLDKNAFEMLTVKDGKFV 379 >UniRef50_A0LQF9 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LQF9_SYNFM Length = 339 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 9/277 (3%) Query: 1 MKRN--AKTIIAGMIALAISHTAMADD----IKVAVVGAMSGPIAQWGDMEFNGARQAIK 54 MK+ ++I + +A MA I+V VV ++G ++++G++E N ++ Sbjct: 1 MKKLTIIISLIVAVALVAWVEATMAGPQESPIRVGVVLPLTGNLSKFGNIEKNSFNMGLE 60 Query: 55 DINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYE 113 +INA GG+ G + V DDA + + K+V D + + G S T + + Sbjct: 61 EINAAGGVNGRPIELVFADDASRIETGRSAVEKLVVQDKVVALTGGYSSDVTLAVAFLAN 120 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 I + +T+R + ++ R S T +++ +K + +AI+HD + Sbjct: 121 RLRIPFLVTTGAADMITERDWDYVFRINQPISEYSKTLIEFLHGELKYKSVAILHDSGLF 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G A + +V +G G DF L+ + K D VY Y E ++ Sbjct: 181 GRAGAIEFSEHATELGWKIVLQEGYEPGTVDFKPLLGKAKAAKPDVVYMISYVHEAALLM 240 Query: 234 RQARSVGLKTQFMGPEGVGN--ASLSNIAGDAAEGML 268 +Q++ + + G G +AG AAE + Sbjct: 241 KQSKELNFAPKVFAGAGAGFTLPEFYELAGSAAENVF 277 >UniRef50_Q1AZ39 Extracellular ligand-binding receptor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZ39_RUBXD Length = 413 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 77/354 (21%), Positives = 142/354 (40%), Gaps = 16/354 (4%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI---KGDKLVGVEYDDACDPKQ 80 + IK+ + ++GP+A G + AI+DIN GGI G KL + D +P+ Sbjct: 33 ETIKIGSLHPLTGPLAVDGKRMDQAVKMAIEDINKAGGIEALDGAKLEFISGDTKGEPET 92 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 A + A +++++G ++G S++ + E + I AT + +GY++ R Sbjct: 93 ASSEAQRMIDEGAVALVGPYTSATAATIARTAERSQVPFIIDVATADSILAQGYRYTFRI 152 Query: 141 AGLDSSQGPTAAKYILETVKPQ-----RIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 + G A+Y+ E + Q +A IH+ ++G + + Q + VV Sbjct: 153 QPGSQTMGEYGARYLKEISEAQGSPVESVAYIHESSEFGTSVFEAFQKEAQRLGIEVVRE 212 Query: 196 DGITA-GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN- 253 A D ++ + + K + D + GYY + + + A +V + + G Sbjct: 213 ITYDALNVSDLTSELTQAKAADADVIVATGYYRDGLLLAQAAANVKPDVKAVYGVANGAF 272 Query: 254 --ASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 + AGD L + + + + + +Y AV+ +A Sbjct: 273 DLDTFPEDAGDNGNYYLSSNYHYDATSDRARKLRQRFEERTGESMRTAAVFSYQAVEVIA 332 Query: 312 TALERTGSDEPLALVKDLKANGANTVI----GPLNWDEKGDLKGFDFGVFQWHA 361 ALER GS EP L + T + GP+ +D++G V Q Sbjct: 333 DALERAGSSEPQELRDAIAETSLQTELFPFDGPIEFDDRGQNVNAQPIVMQVQD 386 >UniRef50_A8S3J1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3J1_9CLOT Length = 401 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 135/330 (40%), Gaps = 6/330 (1%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ ++ M+G G+ G + A+ + NA GGI G ++ DD AV Sbjct: 53 DVIKIGLISMMTGDNPLNGERMNQGVQMAVDEYNAAGGINGKQIELTIVDDQTLQDMAVT 112 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 ANK++ +G+ ++G S++ + + G+ + G T P+++ ++ R Sbjct: 113 CANKLIGEGVVGIVGPHRSTNALAVEAVVKQAGVAAFT-GGTTPQISTLDNDYLFRCRAS 171 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 DS AA + + +++ + + +G G ++ V +G G+K Sbjct: 172 DSIFAEAAAA-YAKELGCKKLGLFFNNDDFGTGAEGVIKQYCADNGMEYV-EEGHNTGDK 229 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA-GD 262 DF+ + ++K +D V + E+ RQ +GL Q + GV + ++ + Sbjct: 230 DFTPQVMKMKDAGVDTVIIWTHDAELAIHARQIYELGLDVQVVSSPGVTMQQVIDMCKAE 289 Query: 263 AAEGML-VTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 EG VT DP + + + Y Y +L ++ G+ + Sbjct: 290 YIEGWYGVTDYVSTSDDPTLVAFKENFEKKYEIEPELYAASYYGGAVALLEGIKAAGTTD 349 Query: 322 PLALVKDLKA-NGANTVIGPLNWDEKGDLK 350 A+++ +K +G + DE DL Sbjct: 350 RKAVMEAVKGLKDLKVPVGVITCDENNDLV 379 >UniRef50_C5ET85 Extracellular ligand-binding receptor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET85_9FIRM Length = 399 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 85/354 (24%), Positives = 157/354 (44%), Gaps = 8/354 (2%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG-DKLVGVEYDD 74 A TA + IKV V ++GP+A G A ++INA GG+ G L V DD Sbjct: 39 AAQSTATGEPIKVGVSNMVTGPMAAGGIRMKQAITMAFEEINANGGVLGGRPLEMVLVDD 98 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 P AV NKI+ + + IG S ++Y G+ I+ AT+P+L + Sbjct: 99 TGTPTGAVNAVNKILGENVSVSIGPHTSPMASATQELYRKAGVPFIT-AATSPKLLEAEN 157 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + R + D + GP ++ + ++I ++D YG + + + Sbjct: 158 PYFFRISVSDGAVGPAMVEFAKDKFGAKKIGALYDTDDYGVAADGATKQYCADNGIEY-Y 216 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL-KTQFMGPEGVGN 253 +G T+G+KD ++ ++++K D V+ + E ++RQ +G+ +GP + Sbjct: 217 SEGFTSGDKDLTSQLSKIKGWGPDVVFDFSHDAEAALIVRQLDELGMGDIPHVGPNALAQ 276 Query: 254 ASLSNIA-GDAAEGMLVTMPKRYDQ-DPANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 + ++ EG + D+ + A + +DA A + Y + Y A A Sbjct: 277 SQTYDLCDAKQLEGTYASTDFYADESNAAMKKFLDAFHARWGEDVERYAAMYYTAAYLAA 336 Query: 312 TALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGS 364 A++R GSD+P + K L + + V G LN + +G++ + + ++ D + Sbjct: 337 DAIDRAGSDKPEDIRKALSETKDFDAVFGKLNCNAQGEM-NTNLYILEFDGDKN 389 >UniRef50_B9M5M6 Extracellular ligand-binding receptor n=1 Tax=Geobacter sp. FRC-32 RepID=B9M5M6_GEOSF Length = 372 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 75/364 (20%), Positives = 146/364 (40%), Gaps = 11/364 (3%) Query: 1 MKRN----AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M R ++I + AL ++ I + G ++G A G +G A+++I Sbjct: 1 MARRFFPQLISMILLLTALVLTGCRDKKPIYLGYAGPLTGKFADLGIAGRDGVVLAVEEI 60 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 NA GGI G ++ + DDA DP+QA V ++V+ G VIGH+ S + + Sbjct: 61 NAGGGIAGREIELLSKDDAQDPQQAQKVDQELVDAGAVAVIGHMTSVMSVAGLPVVNRAH 120 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD--KQQYG 174 ++M+SP ++ +LT + +R S + + +E + + I++++D + + Sbjct: 121 LVMLSPTTSSNDLTGID-DYFLRVYPPSSQVAHLLSTHAIEKLDIRSISVVYDISNEAHT 179 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 G + ++ + +V G+ DFS L ++K ++ + + + Sbjct: 180 LGWYKYFRENHQRLGGRIVQEFPFKGGKADFSHLAEQIKAGGSQGLFIIAGAMDTAMICQ 239 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKK 293 R G + E L + G A EG+ + D PA + + Sbjct: 240 HLRRSGFGMPIVVSEWSTTDELLSQGGTAVEGINFYQTFDRNSDQPAYVAFRKNYRERFR 299 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGF 352 Y + + + +AL R +P L + + + N + + D GD K Sbjct: 300 REPTFASVHAYDSAKLVFSALTR--DSDPKKLKQTILSMANFNGLQDQIMIDRFGDPKRT 357 Query: 353 DFGV 356 F + Sbjct: 358 PFLM 361 >UniRef50_C9S1R9 Extracellular ligand-binding receptor n=2 Tax=Geobacillus RepID=C9S1R9_GEOSY Length = 410 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 137/325 (42%), Gaps = 8/325 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ + + +G A + NG + ++ N G + G K+ DD +P+ A+ Sbjct: 49 VKIGFILSQTGTFAPLSEGIVNGFQLYLEQHN--GMLGGKKVEMKVEDDEANPQVALRKY 106 Query: 86 NKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-QRGYQHIMRTAGL 143 ++V + + ++G + S+ D E + ++I A +L+ + ++ R + Sbjct: 107 RQLVHGEKVDILVGPISSAVAYALRDEVEKDKKVLIDANAAGDDLSWSKKSDYVYRVSFS 166 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 + G + AKY+ E V ++ I+ G+ + R+ + +AA V+ Sbjct: 167 NWQNGSSTAKYLAEQVG-KKAVILAPDYPAGKEVLRAFKAAFEAAGGKVLKEIYPKLNTN 225 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT--QFMGPEGVGNASLSNIAG 261 DF+ + E DF+Y + + + Q + GLK GP G+ L+ G Sbjct: 226 DFAPYLQEASAEKPDFIYAFFTGSDGIRFITQYKEFGLKGKIPLTGPLEFGDELLTQPTG 285 Query: 262 DAAEGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 +AAEG++ + Y + N+ V+A K + Y + ++ A+ + GS Sbjct: 286 EAAEGIIAGINYSPYLDNEQNKQFVEAYKEKYGKLPNIFAVEGYDSAAAIDQAINKAGSL 345 Query: 321 EPLALVKDLKANGANTVIGPLNWDE 345 L+K LK ++ G + D Sbjct: 346 NSQDLIKILKGISLDSPRGKITIDP 370 >UniRef50_Q127P6 Extracellular ligand-binding receptor n=5 Tax=Proteobacteria RepID=Q127P6_POLSJ Length = 392 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 93/359 (25%), Positives = 163/359 (45%), Gaps = 17/359 (4%) Query: 2 KRNAKTIIAGM--------IALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAI 53 R TI+AG +AL S + +K+A VG ++G ++ G N A A+ Sbjct: 1 MRRRNTILAGTALLTTCLSLALLASPVMAKEVVKIAFVGPLTGGVSNMGLGGRNSADLAV 60 Query: 54 KDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIY 112 + N K V DD C P V VA K+ D I + H CS+ + +Y Sbjct: 61 RLRNQDPKSK-YTYELVAQDDECKPNVGVQVATKVAADKNIVAGVTHYCSAVAMATAGVY 119 Query: 113 EDEGILMISPGATNPELT-QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ 171 G+ + GA PE+T +Q + R G +Q A K++ + ++ AIIHD Sbjct: 120 NRFGMPAVVWGAVLPEVTYGNNFQEVHRVNGTMINQNEVAYKFMA-GLGYKKWAIIHDTT 178 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 YG+G + + LK V+ G+TA ++DF+ + ++++ N D +Y+GG P + Sbjct: 179 DYGKGHNKYFSEFLKKGGGTVLGTFGVTADQQDFTTELTKIRELNPDVIYFGGLTPLGVR 238 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGML-VTMPKRYDQDPANQGIVDAL- 288 + Q +G+K QF G G+ + + AG + AEG L +++ P + Sbjct: 239 IRTQMEKLGIKAQFQGTSGIKSDAYIQGAGKELAEGTLSFIEGAPWEKLPGGLFFISKYA 298 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEK 346 + + + Y +AA + A+E+ G + + L + A+T++G + +D+ Sbjct: 299 QQKYGESAEAYGPFAFAAANLIMDAVEKVGP-DRKKVRDVLNRTKDADTIVGKVTFDDH 356 >UniRef50_A4ISM5 Branched-chain amino acid ABC transporter n=6 Tax=Geobacillus RepID=A4ISM5_GEOTN Length = 389 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 77/369 (20%), Positives = 135/369 (36%), Gaps = 21/369 (5%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 + + D+IK+ + + SG A G E + ++ N +GGI G K+ + YDD + Sbjct: 24 ATSGTEDEIKIGAIFSASGGAAPLGKPEMETVKMLVEQWNKQGGIDGKKIKLIAYDDKSN 83 Query: 78 PKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT----NPELTQR 132 +AV K++ D + +IG S ++ + E GI IS A+ NP Sbjct: 84 QNEAVLSTKKLIEQDKVTALIGGTISGNSLAMIPLIEKAGIPYISLAASKQIVNPS-DGS 142 Query: 133 GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANV 192 +TA D ++ E IA ++ YG Sbjct: 143 SRHWTFKTAQGDDIVIQKLLSFLKEK-GWTSIAWLNVANAYGTSGHSEFAHYAPEYGVKA 201 Query: 193 VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVG 252 V + A D A++ R+KK N + G E + + R +G+ + GVG Sbjct: 202 VIEEEFEATVDDAKAMLTRVKKANPQAIVVWGTAQESAVVTKNIRELGIDVPIIESHGVG 261 Query: 253 NASLSNIAGDAAEGM------LVTMPKRYDQDPANQ---GIVDALKADKKDPSGPYVWIT 303 S ++AG+AA G+ ++ + D DP + + + + Sbjct: 262 TKSFIDLAGEAANGVILPAGRILVADQLPDSDPQKETLLTYKEQFEKTYNYEPTTFGGHA 321 Query: 304 YAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNW--DEKGDLKGFDFGVFQWH 360 + A L A++ G + + + L K + G D+ L + Q Sbjct: 322 WDAFHLLMNAIKE-GKTDKENIREALEKTTDFVGISGVFRMSKDDHTGLDADSLVMVQIQ 380 Query: 361 ADGSSTAAK 369 DG A+ Sbjct: 381 -DGKFVLAE 388 >UniRef50_Q0FY58 ABC transporter substrate-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FY58_9RHIZ Length = 406 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 84/373 (22%), Positives = 155/373 (41%), Gaps = 23/373 (6%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIA-QWGDMEFNGARQAIKDINAK 59 +K +A ++A +AL +S + IK+ + +S P Q G+ +G R A++++NA Sbjct: 5 IKLSATALVA--VALGVSAAQAQETIKIGGIAPLSPPGGVQTGESLRDGMRVAVEELNAA 62 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G ++ V D + P++ VA ++ ++ + V G S+ + E I Sbjct: 63 GGIDGREVELVVEDTSGVPEKGVAAFERLASSENVVAVTGSAHSAVCSAVGPVAEKYDIP 122 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 I+ + ++T + R +S AA + ++ + IAII + +G G+ Sbjct: 123 FIAGECWSDDVTAAQIPEVFRITVANSLVYSVAADW-VKEAGFKNIAIISENSDWGFGII 181 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKEN--IDFVYYGGYYPEMGQMLRQA 236 LK ANV F DF+ + +LK+ + D + G + MLRQA Sbjct: 182 DVFTSNLKDTGANVTSF-TAERTVSDFTPQLLQLKRADPQPDLIVAGFTGSNLLLMLRQA 240 Query: 237 RSVGL-----KTQFMGPEGVGNASLSNIAGDAAEGML---VTMPKRYDQDPANQGIVDAL 288 +G+ F V N+ GDA ++ +P + D ++ A Sbjct: 241 YDLGVAPSPQTAIFAAGSDVLEPEFWNVMGDAGTYVIGNPAGLPGKPDT-ELSRSFSKAY 299 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 + + P+ Y V +A A++ GS E AL + L+ + G + + + D Sbjct: 300 EEEFSRPANAVAMEGYDGVMVIAEAIKAAGSTEGPALQEALRNLRWSGTRGEIYFPQTTD 359 Query: 349 LKGFDFGVFQWHA 361 +Q+ Sbjct: 360 PA------WQYQQ 366 >UniRef50_D2SCY2 Extracellular ligand-binding receptor n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SCY2_9ACTO Length = 392 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 144/345 (41%), Gaps = 9/345 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 ++ + V +++G A +G+ + G A + KGG+ D DD DP+Q + + Sbjct: 51 EVPIGAVLSLTGAAASYGESQQRGLELAAAQLAEKGGVTYD---LRIEDDQTDPRQGITL 107 Query: 85 ANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 ++ VNDG+ +IG S++ A I ++ G+ ++ T +T+ G +I R + + Sbjct: 108 FDQFVNDGVSLIIGPTLSNAAVQADPIAQEAGVPVLGISNTAAGVTEIG-DYIFRNSLTE 166 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEK 203 + P E Q + +++ + E ++ L+ V + + Sbjct: 167 QAVIPQTIATATEEFGLQDVVVMYSNDDAFTESGYQAFAAALEEQGVTVSETITFSKADT 226 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 DF AL+ + ++ + D + ++ QAR +G+ +G G N L AG A Sbjct: 227 DFRALLTQAQQSDPDAIVVSALIEAAIPLVTQARELGIDVPIIGGNGFNNPRLMADAGQA 286 Query: 264 AEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 AEG++V D P N + +A+ + YA + + A+ + + Sbjct: 287 AEGVVVGAAWNSASDNPENTAFLADFEAEYGAQPDQFAAQAYAGLMLVDQAVRANCAADR 346 Query: 323 LALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 +L + L + TV+G + DE D V Q DG+ Sbjct: 347 ESLKQALGELENVPTVLGEFSIDENRDAVHPA--VVQVVRDGTFA 389 >UniRef50_A8S3D2 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3D2_9CLOT Length = 415 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 134/335 (40%), Gaps = 5/335 (1%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 +A D I++ + ++G + G+ N A+ ++IN +GG+ G + V D Sbjct: 53 PSASGDPIRIGLTTVLTGDRSLEGEYASNAAKIITEEINTQGGVLGRPIEIVIEDALGTD 112 Query: 79 KQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA--TNPELTQRGYQ 135 AV K+ +D I ++G S+ S + IL + G+ T + Sbjct: 113 VGAVNAYRKLASDDSIVAIVGPDSSNDGMAQSPSALEFKILTTAQGSSPTLKNMCNNDNP 172 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 ++ + D + KY +E + + A++HD + AR + LK+ V Sbjct: 173 YLFQLRACDDTLCAALIKYSVEELGIKSYAVMHDTETSSADQARLFTEALKSYGIEPVVT 232 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 T G KDFS+ IA+++ D + + E +++Q RS+G++ +G G + Sbjct: 233 VPFTTGTKDFSSHIAQVQASGADAIIGAAFQTEAAILIQQIRSLGIEAPILGSNGFADPV 292 Query: 256 LSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 +AG+ + + + +P + + K D G Y + + A+ Sbjct: 293 TIQLAGELNDNVYCASAWVPNTPNPKGAALAEKYKELYGDDCGKAAAQIYDHISVICEAI 352 Query: 315 ERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGD 348 GS + A+ + + G I + GD Sbjct: 353 TLAGSTDREAVREAMNTIGDYQGAITKYDCRTNGD 387 >UniRef50_B7KWM3 Extracellular ligand-binding receptor n=9 Tax=Proteobacteria RepID=B7KWM3_METC4 Length = 396 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 131/337 (38%), Gaps = 12/337 (3%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R +I A+ +K+ +V A+SG A+ G+ G AI++IN GG+ Sbjct: 13 RRFVLGALLAGVTSIGAVRAAEPVKIGLVTALSGQSAKSGEAISRGIGLAIEEINRNGGV 72 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 G L V DD +P + V A +++ G+ +IG L + + I + + Sbjct: 73 LGRPLELVARDDEANPSKGVLAARELIQRAGVVALIGGLDTPVSMAIVPIANQMKVPFVG 132 Query: 122 PGATNPELTQRG--YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 P A +T+ G ++ R + +D+ Y ++T ++ I +GE + Sbjct: 133 PWAAGTGITRNGAVDNYVFRVSAVDALVDEALVAYAVKTYGAKKPGAILVNNAWGESNQQ 192 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + LKAA + A + D ++RL++ D ++ G Q+++ + Sbjct: 193 GLVSALKAAGLPSAGIEKYEANDIDMVPQLSRLREAGADALFLVGNVGPSAQVVKSLDRM 252 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY--DQDPANQGIVDALKADKKD--- 294 G + G +AG A + + + P + ++DALKA Sbjct: 253 GWTVPVISHWGPAGGRFDELAGPGAARVHFVQTFTFAGNDSPKAKAVLDALKAKYPAIKS 312 Query: 295 ----PSGPYVWITYAAVQSLATALERTGSDEPLALVK 327 + Y A +A A++ G+ E + Sbjct: 313 MADVTPAVGIANAYDATHLIALAIQAAGATEGPKVRD 349 >UniRef50_A4XZ18 Extracellular ligand-binding receptor n=3 Tax=Bacteria RepID=A4XZ18_PSEMY Length = 395 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 76/374 (20%), Positives = 138/374 (36%), Gaps = 19/374 (5%) Query: 3 RNAKTIIAGMIALAI---SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 R K +A AL+ A+ IKV +V A+SG A+ G+ G AI ++NA+ Sbjct: 9 RRLKPCLAAAFALSCWFSLSAQAAEPIKVGLVAALSGQSAKSGEALTRGLTIAIDEVNAQ 68 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G L V DD +P + + A +++ + + + G L + + + + Sbjct: 69 GGVLGRPLQLVRRDDESNPSKGLLAARELIQREKVAVLFGGLDTPVSLAIVPLANQMKMP 128 Query: 119 MISPGATNPELTQRG--YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 + A +T+ G ++ R + +D Y + Q+ +I +GE Sbjct: 129 FMGVWAAGTPITRNGAADNYVFRVSAVDELVDEALVSYAQKHFATQKPGMILINNPWGES 188 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 + + L A V + I + D ++RLK+ D + Q+++ Sbjct: 189 NEQGFRKALAARGMPVAGVERIEGSDLDVVPQLSRLKQAGADTLLLVANVAPSAQVVKSL 248 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGM--LVTMPKRYDQDPANQGIVDALKADKKD 294 +G + G +AG A + + T + D + I AL+ + Sbjct: 249 DRMGWDVPVVSHWGPAGGRFGELAGPNAGRVHFIQTYTFSQEGDARGEAIFAALQKRYPE 308 Query: 295 -------PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLN--WD 344 + Y A+ A A+ GS E A+ +I + Sbjct: 309 IKSLADVTPAVGIANAYDALHLTAQAIAAAGSTEGPAIRDGYYGIQRYEGLIKTYEKPFS 368 Query: 345 -EKGDLKGFDFGVF 357 E+ D G D VF Sbjct: 369 AEQHDALGVDDYVF 382 >UniRef50_Q140M5 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q140M5_BURXL Length = 425 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 68/331 (20%), Positives = 135/331 (40%), Gaps = 9/331 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ G SG ++ G +G + + IN +GG+ G KL + DD +P +++A Sbjct: 68 DPIKIGFTGPASGGMSLLGQGVRDGIQVYVDYINDQGGVNGRKLELIAEDDGYEPMRSLA 127 Query: 84 VANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 K+ D + ++ + ++ + +I+P A + +LT +++ + Sbjct: 128 GVKKLAEQDNVVAIVSPTGTPGVTAMLPYAQERKLPIIAPYAFSHKLTTPTQRYVFTSLP 187 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 Q Y+++T+K +IA I+ +G+ + +K N G Sbjct: 188 EVRLQADVLGTYLVKTLKHTKIAAIYQNDDFGQDAVAGFEARMKKDNVPFT-KLPFDRGT 246 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 +FS ++++ ++ + V + G + ++R+A +G K QF G +G+ +AG Sbjct: 247 SNFSGVVSQARQSGAEDVVFFGIPRDGALIMREANKMGWKPQFSGHSALGDPQTFTLAGA 306 Query: 263 A-AEGML--VTMPKRYDQDPANQGIVDALKAD-KKDPSGPYVWITYAAVQSLATALERT- 317 A G + M + PA + K K P Y Y A + AL+ Sbjct: 307 ALVNGAIAVAVMEPLDSKKPAVLDFIARQKKYLPKTPPTTYSMHGYNAAEIFVEALKHVQ 366 Query: 318 GSDEPLALVKDLKANG--ANTVIGPLNWDEK 346 G +V L+ ++ P+ + Sbjct: 367 GEPTGDKIVAALEQMNNFNTGLMSPITFTAT 397 >UniRef50_C4RKJ8 Extracellular ligand-binding receptor n=2 Tax=Micromonospora RepID=C4RKJ8_9ACTO Length = 394 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 93/344 (27%), Positives = 159/344 (46%), Gaps = 9/344 (2%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 A D+K+ G ++G A G NG + AI N K+ EYD DP +A Sbjct: 44 AACDLKIGFFGPLTGDAAGLGIHMRNGTKLAIDQYNKDNA--DCKVNLAEYDSQGDPAKA 101 Query: 82 VAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 A+A + V D + +IG S ++ A I+++ G+ +I+P AT P L+ + ++ R Sbjct: 102 PALAQQAVGDTKVVGIIGPAFSGESEVADPIFDEAGLPIITPSATRPSLSTKNWKIFHRG 161 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 G D+SQGP A +YI +K +++ ++ D+ YG GL V+ L A V D + Sbjct: 162 VGNDTSQGPAAGRYIKNVMKAEKVYVVDDQSAYGAGLVDEVKKVLGA----VAGEDKVQV 217 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 + +FSA++ ++ +++GGYY E G +L+Q + G K + +GV +A+ +A Sbjct: 218 KQTNFSAVVTKIVGSGATVLFFGGYYTEAGLLLKQLKGAGWKGTMVAGDGVNDANFIKVA 277 Query: 261 GDA-AEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 G AEG ++T P + D A + G Y ++Y + ++ S Sbjct: 278 GQQVAEGTVLTCPCAPATAAKGTFVTDYKSAFENAEPGTYADVSYDITKIFLEGIKSGKS 337 Query: 320 DEPLALVKDLKANGANTVIG-PLNWDEKGDLKGFDFGVFQWHAD 362 L N A T G ++ G+L V+ + + Sbjct: 338 TRADLLAFVKSYNKAGTATGVTYKFESNGELDPAQVLVWAFKVN 381 >UniRef50_Q21B30 Extracellular ligand-binding receptor n=2 Tax=Alphaproteobacteria RepID=Q21B30_RHOPB Length = 390 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 132/346 (38%), Gaps = 6/346 (1%) Query: 1 MKRNAKTIIAGMIALAISHTA-MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M R + + A++ A AD IK+ VV +SG G G A ++NA Sbjct: 1 MIRTTLILSSLCATTALTAPAFAADPIKIGVVTPLSGTYTPIGQQVRWGLELAASEVNAA 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G + + D+ +P AV A K+ + + ++ G + S ST E G L Sbjct: 61 GGIMGRPVQLIFEDEEANPSVAVQKAEKLFDVQKVDFLTGTVNSGSTLAVGQTAERAGKL 120 Query: 119 MISPGATNPEL-TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 + + + + T + ++ R Q A ++++ ++ + + G Sbjct: 121 IATTVSFADSITTDKCSPNVFRVNARAGQQSTALAAWVIKQKPKAKVYFLGPDYEMGRST 180 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 + + ++A A KDF+ +L++ + +Y + ++L Q + Sbjct: 181 VATFKKTVEALGAVPAGEVFAPLDSKDFTQYFGQLRQARPEVLYTSVAGNDTVRLLTQMQ 240 Query: 238 SVGL--KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP-ANQGIVDALKADKKD 294 GL +G G + G AAEG + D N+ V A KA K Sbjct: 241 DFGLLKDLLVVGASGTVTSQNIAAIGGAAEGFGTGVGYSTQIDTLENKTFVAAFKAANKS 300 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP 340 Y +Y + A+E+ S + + + ++ NT G Sbjct: 301 DPDLYGADSYGLIYFYKAAVEKAKSTDTDKVREAMRGLEWNTPQGK 346 >UniRef50_Q7M8R4 ABC TRANSPORT SYSTEM PERIPLASMIC BINDING PROTEIN n=2 Tax=Helicobacteraceae RepID=Q7M8R4_WOLSU Length = 372 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 83/349 (23%), Positives = 151/349 (43%), Gaps = 16/349 (4%) Query: 10 AGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI--KGDKL 67 +I+ + + +A ++K+ VV +SG I +G G IN GD + Sbjct: 7 LALISAVAAGSLVAAEVKIGVVLPLSGAIGGYGQSANKGITL----INELKPTLANGDTI 62 Query: 68 VGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATN 126 V D+ D ++ K+V+ D + VIG L S++T + I +D +I+P ATN Sbjct: 63 KLVVVDNKSDKIESANAMQKLVSSDKVDAVIGALTSTNTLAMTKIADDTKTPLIAPVATN 122 Query: 127 PELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGL 185 +T +G ++ R DS QG A +K ++ A++ D Y GL ++ + Sbjct: 123 DRVT-KGRNYVSRVCFSDSFQGVIGANLAYNDLKAKKAAVLFDSGSDYSIGLTKAFKQQF 181 Query: 186 KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQF 245 + + AG KDF A I+ +K + +D VY Y E + Q++ +GL F Sbjct: 182 TKLGGKIEIEAQVPAGTKDFKAQISSVKAKGVDVVYIPIYSNEAALIAIQSKQLGLNVPF 241 Query: 246 MGPEGVGNAS-LSNIAGDAAEGMLVTMPKRYD--QDPANQGIVDALKADK-KDPSGPYVW 301 +G +G+ + +A EG + T D Q P + A + + Sbjct: 242 IGGDGIAADKVFFEVGKEAIEGYMATDYYSPDAKQTPKGAEFMAAYAKKYNNEKVHTFAA 301 Query: 302 ITYAAVQSLATALER-TGSDEPLALVKDLKANG-ANTVIGPLNWDEKGD 348 + A + +A+E+ T + + ++++A + G ++ E GD Sbjct: 302 MIADAYGIITSAMEKCTNPKDKECVNQNIRATKNFEGITGTISL-ENGD 349 >UniRef50_B0TAM9 Branched-chain amino acid abc transporter, amino acid-binding protein n=2 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAM9_HELMI Length = 414 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 82/353 (23%), Positives = 146/353 (41%), Gaps = 20/353 (5%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + +K+ + SG A WG AR A+ +INA GGI G K+ V D + AV Sbjct: 51 NVVKIGALVDKSGKGADWGKKNEIAARIAVDEINAAGGINGAKIELVVKDTGGKNEDAVN 110 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 + + ++G+ ++G S + A G+ +ISP + ++++ R + Sbjct: 111 LTRTLADEGVAAIVGPFFSGECEVAFPQANKLGVPIISPSSAKAGVSEKNRPWAFRNSMT 170 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGL-ARSVQDGLKAANANVVFFD---GI 198 D A ++ + +A+IHD K + + + + + KAA N+V Sbjct: 171 DDKLLRDATPLFVKAYNVKTVAVIHDEKDAWSKAVGSTDLPREFKAAGVNIVNEGNYLTY 230 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 GE +F+A++ ++K N D + +GG Y E ++ GLK +G G+ +A+L Sbjct: 231 KTGETNFAAIVTQIKTMNPDAIAFGGLYNEAASFAKEMERQGLKKPVLGGVGMYSAALIQ 290 Query: 259 IAGDAAEGMLVT-MPKRYDQDPANQGIVDALKAD------KKDPSGPYVWITYAAVQSLA 311 G A E + T Y +P + VD K + D G + Y ++ Sbjct: 291 QGGKAVEDFVATSCFNVYADNPRVKSFVDKFKPEAAKITPADDLPGSFEAQFYETFYMIS 350 Query: 312 TALERT---GSDEPLALVKDLKA-----NGANTVIGPLNWDEKGDLKGFDFGV 356 L++ GS L +K + G + D+KGD + + Sbjct: 351 NVLKKANKNGSTPVADLRNTIKDGLANLKDFEGLTGKTSIDDKGDGIKASYPM 403 >UniRef50_C7RQ13 Extracellular ligand-binding receptor n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ13_9PROT Length = 430 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 138/351 (39%), Gaps = 10/351 (2%) Query: 9 IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLV 68 + +++L + A+ +++ +G +SG +A G NGA A++ N +GGI G ++ Sbjct: 72 LLALVSLGLPGCTPAEPLQIGFLGGLSGRVADLGIGGRNGAILAVEMRNQRGGINGRQVE 131 Query: 69 GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPE 128 + DD D + A +++ ++ +IG + S+ G+ +ISP T Sbjct: 132 LIVDDDQQDAEVARQAVARLLARKVELIIGPMTSAMALAVLPQVNAAGVPLISPTVTTNV 191 Query: 129 LTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD--KQQYGEGLARSVQDGLK 186 LT Q R ++ P +A+Y +R+ +++D + Y E A + + Sbjct: 192 LTGLDDQ-FFRVVSPTAAHAPKSAEYHFRQHGLRRVVLVYDLRNRAYSESWAGDFRSAFE 250 Query: 187 AANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM 246 A +V G + FS L + + D V + +++Q R + Sbjct: 251 ARGGLIVAAIGFDSSTT-FSTLASGVLTHRPDGVVVIANSMDTALLIQQLRMRDATVRIA 309 Query: 247 GPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDALKADKKDPSGPYVWITYA 305 E L + G A EG++V R +PA A + G + Sbjct: 310 TSEWAATERLVELGGRAVEGVVVAQYVDRESSEPAYLQFHRAYRERFAQEPGFPGLTAFD 369 Query: 306 AVQSLATAL--ERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 A AL + G +++ K GA T P+ +D GD + + Sbjct: 370 ATNVALDALASKSAGQTLKESILAHGKFAGAQT---PIVFDANGDTQRDTY 417 >UniRef50_A1UHF2 Extracellular ligand-binding receptor n=9 Tax=Actinomycetales RepID=A1UHF2_MYCSK Length = 403 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 87/341 (25%), Positives = 158/341 (46%), Gaps = 9/341 (2%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A + +A+ GA++GP A G NG + A+ NA G ++ +D DP++ Sbjct: 71 ATCPPLSIAMAGALNGPDAALGINIKNGVQLAVDKHNAAN--PGCQVQLKTFDTEGDPQK 128 Query: 81 AVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A A+A +IV+D ++G S T D++ G++ + ATN L+++G++ R Sbjct: 129 ASAIAPQIVDDQYTIGLVGPAFSGETNATGDVFNQAGLVAATASATNVTLSEKGWRTFFR 188 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 D QGP+ A Y+ T+ Q++ ++ D YG GLA++V++ L A+ + Sbjct: 189 GLANDGVQGPSVANYLKNTLGHQKVCVVDDSTDYGLGLAQAVRETLGPV-ADPACNISVK 247 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+KDFSA + ++K + V++ GYY E ++Q + G + F+ +G + Sbjct: 248 KGDKDFSAAVTQVKGASPQSVFFSGYYAEAAPFVQQLKDGGFEGTFVSADGTKDPEFVKQ 307 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 AG+A++ L++ P PA G D G Y Y L ++ +G+ Sbjct: 308 AGEASKDALLSCPCG----PATGGFADEYNQKFGQEPGTYSTEGYDLGTILVKGID-SGA 362 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 AL+ ++ V W +G+L +++ Sbjct: 363 ITRQALLDYVRNYNGQGVARNYQWTPQGELTTTLIWMYKVQ 403 >UniRef50_B5YK45 Leu/ile/val-binding protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YK45_THEYD Length = 400 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 90/381 (23%), Positives = 164/381 (43%), Gaps = 15/381 (3%) Query: 1 MKRNAKTIIAGMIALAI-SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MKR + I+A M++ + + + AD IK +++G +A+ G++ NG + +N K Sbjct: 1 MKRLSILILAVMLSFCLITFSFAADVIKFGAALSLTGKLAKEGNLVKNGYELWKETVNKK 60 Query: 60 GGIKG----DKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYED 114 GGIK K+ YDD DP +A + K++ DGIK ++G S S S I E Sbjct: 61 GGIKIGNKYYKVDIKYYDDESDPNRAAKLVEKLITEDGIKLILGPYGSESVFSTSAITEK 120 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILET-VKPQRIAIIHDKQQY 173 G LM+ GA +L RG++++ + + K ++ KP +AI++ + Sbjct: 121 YGALMVQGGAAADKLYTRGFKNLFGIYTVATEYMDDTLKMLMNKAPKPTTVAIVYSNDLF 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 +A+ + + VV++ G +D S +I +K +N D + G++ + ++ Sbjct: 181 STQVAQGAKASAQKYGYKVVYYKDYPKGTQDLSTVIVEIKAKNPDILIGCGHFQDTIVIV 240 Query: 234 RQARSVGLKTQFMG-PEGVGNASLSNIAGDAAE---GMLVTMPKRYDQDP---ANQGIVD 286 +Q++ L + + G + AE G P +DP +N V Sbjct: 241 KQSKDYKLNPKAIAFSVGPTLPDFVSALKSDAEYILGSAQWTPTLKYKDPVFGSNANFVK 300 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGS-DEPLALVKDLKANGANTVIGPLNWDE 345 A K + + AA A+E+ G+ + + + L + T+ G + +D Sbjct: 301 AFKTKFRVEPNYHAAGGAAAAVIFQRAIEKAGTFTDINRIRESLLSFNEETLFGKIRFDS 360 Query: 346 KGDLKGFDFGVFQWHADGSST 366 G + G V Q T Sbjct: 361 SGKVVGKGMPVIQILKGTQKT 381 >UniRef50_Q137Z6 Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q137Z6_RHOPS Length = 383 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 72/355 (20%), Positives = 136/355 (38%), Gaps = 10/355 (2%) Query: 2 KRNAKTIIAGMIALAISHTAMAD---DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 ++ + + L+ A A I + ++GP++ G N A +DIN Sbjct: 5 RKEFLSSMVAATVLSFVGAANAQQTGPILIGATVPITGPLSLTGKQYQNSLAMAEEDINK 64 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGI 117 GGI G ++ V D AV K+ + + S+ + + G+ Sbjct: 65 AGGINGRQIKVVFEDTQASNGTAVNAFVKLAQETKPAFFFLSSYSTQNLAVAPELKKIGV 124 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 + G + G + + R DS + ++ +K ++ I++ + +G+G Sbjct: 125 PAMYAGG-ADAVADGGNEWMFRIRPADSVSAAGMVRAAVDVIKAKKPGILYIQNDFGQGG 183 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 A++ +AA VV + +KDFSA + L+ + D + Y + +LRQA+ Sbjct: 184 AQTAAKRFEAAGIPVVGMEAYGQNDKDFSAQLLSLRSKGADTILIFNYPQDGALVLRQAK 243 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDA-AEGMLVTMPKRYDQDPAN--QGIVDALKADKKD 294 +G K + + + A EG+ + D + + V+ KA Sbjct: 244 LLGFKMPLVTSSAALVPAAMQLLSPADLEGVWGVVDTFMDATAGDRMKDYVERFKAKFGI 303 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGD 348 PY Y +A + + G +P AL + L A V ++D KG+ Sbjct: 304 DPDPYGLAYYDGAFLMADGMRKVG-TDPKALREWLAAVKDWQGVGHVYSYDAKGN 357 >UniRef50_Q2YJA9 Leu/Ile/Val-binding protein homolog 5 n=41 Tax=Proteobacteria RepID=LIVB5_BRUA2 Length = 406 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 82/368 (22%), Positives = 155/368 (42%), Gaps = 16/368 (4%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R +AG+ + IS A D I + +SGP+A G + I INA GG+ Sbjct: 11 RVLACGVAGLSLMTISAKAE-DVITLGASVQLSGPVANTGRYYQDAYNITIDKINAAGGV 69 Query: 63 KGD----KLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 K D KL YD+ + +V ++V D + +++G S+ S I E I Sbjct: 70 KVDGKPYKLALKIYDNQSNVNLSVRQYTQLVTTDKVNFLLGPFASNFALADSVISEKYRI 129 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQ--RIAIIHDKQQYGE 175 M+ G + E+ R +++I T S+ + + +L+ + P+ +A+++ + Sbjct: 130 PMVQGGGASDEIYSRNFKYIFGTLAPASNYFGSTVE-MLKGLDPKVTNVALVYADDSFDV 188 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 +A + LK A + + DF++LI+++K +N+D V G+ E+ +RQ Sbjct: 189 SVADGTRKLLKDAGFTIAADEKFATNSTDFTSLISQIKSKNVDAVLVAGHETEVLNFVRQ 248 Query: 236 ARSVGLKTQFMG-PEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDA------L 288 ++S+ + GV G A D ++ DA Sbjct: 249 SKSLAFDPKLYSFTVGVPTEDFRKALGKDANYAFGMTAWLPSADLKDRWFGDAAKFETEY 308 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 KA + + V++ A A+E+ S +P + L + +++ GP+ +D++G Sbjct: 309 KARFNYEPDYHAASGASDVEAFAEAIEKANSLDPQKVRDALASIKFDSLYGPIAFDKQGQ 368 Query: 349 LKGFDFGV 356 + V Sbjct: 369 INLPQIVV 376 >UniRef50_A1WPI8 Extracellular ligand-binding receptor n=3 Tax=Proteobacteria RepID=A1WPI8_VEREI Length = 410 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 151/373 (40%), Gaps = 24/373 (6%) Query: 9 IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI----KG 64 +AGM ++H A + V V A+SG A +G E A++++NA GGI Sbjct: 17 LAGMTVALVAHAAD-KTLTVGVSDALSGGGAVYGVPELRAIELAVEEVNAAGGIPVGGDA 75 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 +L + YDD DP +A VA K+++ DG+K ++G+ CS+S + E LM+ Sbjct: 76 YRLKTISYDDKADPTEATNVARKLLDRDGVKVLLGYCCSASGGAVASFMGREDALMLVGT 135 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQ 182 A ++T G ++ RT G A +Y+ + + + I+ + ++ Sbjct: 136 AGARDITAAGNPNVFRTRPPGDYTGAAAGRYLYDK-GVRTLGILGVRDVALFTQYREALI 194 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 + A VV + ++D + + +LK+ + D V+ GY + RQ + +G+K Sbjct: 195 KRFEQAGGKVVALETFGGHDRDMTPQLTKLKRLDPDAVFISGYVEQAAFAYRQFKEIGMK 254 Query: 243 TQFMGPEGVGNASLSNIA-GDAAEGML----VTMPKRYDQDPANQGIVDALKADKKDPSG 297 G G +A + EG+ V + + DA K + Sbjct: 255 MPRYGFSGGSERQFLKVASSEQMEGVTDLLSVEFSVQALGSENAKRFADAYKKKYGEEPT 314 Query: 298 PYVWITYAAVQSLATALERTGSD-EPLALVKDLKA--------NGANTVIGPLNWDEKGD 348 P Y V L AL+ S + L+ L+ + G + +D G Sbjct: 315 PNTAYAYDQVYVLRDALKSAQSTSDVKKLIAALRGLPVPKEVLLKYQPIDGKM-FDGNGQ 373 Query: 349 LKGFDFGVFQWHA 361 + G FQW Sbjct: 374 AYISN-GAFQWKQ 385 >UniRef50_B9JMP9 Amino acid ABC transporter n=3 Tax=Proteobacteria RepID=B9JMP9_AGRRK Length = 363 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 147/361 (40%), Gaps = 18/361 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ ++ + A++ A A DI + + +SG A G+ + G A+ INA G Sbjct: 1 MKKLLSFVV---VLAALAGPAAAQDIVIGAILPLSGASATQGEDQRRGMELAVDKINAAG 57 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILM 119 G+ G L V D A + A+ A K+V D + V+G S T P +D +G Sbjct: 58 GVMGQPLKIVTEDSAGNAVTALTAAKKLVTVDNVPVVLGEFSSGITIPVADYLLQQGRTH 117 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 I+ G+++ ++ G + GLD+ G A ++++ +++AII YG+G+ Sbjct: 118 INIGSSSIKIRDLG-KGSFSVIGLDNVSGAFGADDVIKS-GAKKVAIIAPNNAYGQGIVD 175 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + KA V T G+ + + +L+K D Y Y E + R++ + Sbjct: 176 AFSTKFKALGGTVTSSILYTEGQTTYRPELQQLEKSKPDVYVYSAYGKESATINRESFEL 235 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD---PANQGIVDALKADKK-DP 295 GL E A + ++ V D + + KA K D Sbjct: 236 GLN------ETPWYALYLTMCTADSDPQYVEGQIGMDLNYIGTGGADYQKSYKATFKSDF 289 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG--ANTVIGPLNWDEKGDLKGFD 353 + Y Y V +A A+++ S EP + L G V GP+ +D+ Sbjct: 290 TSTYNGFAYDGVMMVAAAIDKAKSTEPAKINVALAEIGKNYQGVTGPITFDDHNQRSAQP 349 Query: 354 F 354 + Sbjct: 350 Y 350 >UniRef50_A0NLZ5 Hydrophobic amino acid ABC transporter (HAAT) family, amino acid-binding protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NLZ5_9RHOB Length = 400 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 101/397 (25%), Positives = 170/397 (42%), Gaps = 35/397 (8%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ T +A L A+ADD K+ ++ ++GPIA + N A A+K +N +G Sbjct: 1 MKK-LTTFMAAAALLGSGTAALADDTKIGILMDITGPIANFIPPLQNAADLAVKQVNEQG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSST-QPASDIYEDEGIL 118 G+ G V V D + AV A K+VN + + ++G L S +T A G+ Sbjct: 60 GLLGGSAVAVYGDTTGTAQGAVDAAQKLVNVENVPIIMGSLMSGTTIAAAEAAIIPAGVP 119 Query: 119 MISPGATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 ISP AT+P +T + R D+ QG AK +++ +++A+ + YG G+ Sbjct: 120 QISPTATSPAMTFLEDNGLVFRIVPSDNYQGEILAKMVMDE-GIKKVALTYVNNDYGVGI 178 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPE-MGQMLRQA 236 + D A +V + + + +A L K + + + Y + G+++RQA Sbjct: 179 GETFIDAYTEAGGEIVAEAKHEEKKDSYRSELASLAKGDAEALVVIAYAGDSGGKIVRQA 238 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 GL T+F+G +G+ + L G DA + + P ++PA + + DA A + Sbjct: 239 IEGGLFTKFVGTDGLRDELLIQNVGADALKTSFFSSPTSPAENPAQKALHDAFNAAYGEG 298 Query: 296 SG-PYVWITYAAVQSLATALERTGSDEPLALVKDLKA----------------------- 331 + +V TY A A+E+ GS + + + LK Sbjct: 299 ADKAFVDQTYDATFLALLAIEKAGSTDRAKIAEALKEVAMAPGEKVGPGEWAKAIALIKE 358 Query: 332 ---NGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 G +DE GD+ G+ G F DG Sbjct: 359 GKDIDYEGASGSAEFDENGDVGGY-IGKFVVDGDGYK 394 >UniRef50_Q7WPC4 Branched-chain amino acid ABC transporter, binding protein n=2 Tax=Bordetella RepID=Q7WPC4_BORBR Length = 379 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 89/378 (23%), Positives = 155/378 (41%), Gaps = 17/378 (4%) Query: 1 MKR--NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 MKR T ++L + A IKV V+ +SG G + IN Sbjct: 1 MKRIHRLFTAGLLALSLGAAAQAQQTPIKVGVIFPLSGGAGPQGQHVTQAIQAMAAVINE 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G ++ V DD P V+ A ++++ G+ +I S T + G+L Sbjct: 61 SGGVMGRQIEIVSRDDESTPAVGVSRATELISAGVSVIIEGWNSPVTLAMQPVIARAGVL 120 Query: 119 MISPGA-TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 I+ + +P L+ G +R +S G A YI ++V +R+A + + YG G Sbjct: 121 DITAISKADPILSGEGNPLAIRLNSSNSQDGAVIADYI-KSVGAKRVAFLTENDAYGNGA 179 Query: 178 ARSVQDGLKAAN--ANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG--QML 233 S++ LK V + + DF + ++ D +G ++ Sbjct: 180 QESIETSLKKLGYAYEKVAEEKFPFTQADFRVAMTNVRAAKPDVTVAINANEGLGMPAII 239 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-----QDPANQGIVDAL 288 RQAR L + + G S+ N+AGDAA+G++ D +PANQ V Sbjct: 240 RQARQSRLPGKLVSAVGTVAPSVINVAGDAADGLIGADIYFPDVEPFASNPANQRFVAKT 299 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGAN-TVIGPLNWDEKG 347 + K ++ + ++Q A A + + A+ K ++ T +G L ++ G Sbjct: 300 QEMFKYTPDKFMALGATSLQVWAMAANELKTLDREAIAKRIRGGAFKGTAMGDLQFEPNG 359 Query: 348 DLKGFDFGVFQWHADGSS 365 LK ++ +F+ DG Sbjct: 360 QLKS-NYYLFRV--DGRK 374 >UniRef50_Q1AZK7 Extracellular ligand-binding receptor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZK7_RUBXD Length = 414 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 148/345 (42%), Gaps = 10/345 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 I++ + +SGP A G+ NG ++ +N I G ++ D DP+ A+ V Sbjct: 49 PIRIGALLTLSGPYATLGESIRNGMETFLR-LNDN-QIGGREVQVRYEDSEGDPQVALRV 106 Query: 85 ANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-QRGYQHIMRTAG 142 ++ + +++G + S+ ++ + + I++I+ A +L+ ++ + R + Sbjct: 107 YRQLTGQNAVDFLMGPVISTEALALANRLQRDRIILINSNAAANDLSWEQKSDYSYRVSQ 166 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 + G A+YI + + I G + + + + A VV G Sbjct: 167 SNYQLGAAGAEYIFRNIG-KTAFTIGMDYVAGYEVIEAFRIAYREAGGEVVGSAFSAPGT 225 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT--QFMGPEGVGNASLSNIA 260 DF+ + +++ + V+ + + L+Q S GLK +G + + + ++++ A Sbjct: 226 ADFATYLTNIRRAEPEVVFSFLSGTDAIRFLQQYDSFGLKGEIPLIGHDQLASPTVTDPA 285 Query: 261 GDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 G+AA G++ + ++ N+ V+A + + P Y +A A+E GS Sbjct: 286 GEAAVGVMACSFYYPNLENETNRRFVEAYRKEYDQPPDTIACQGYDTGNIMAKAVEEAGS 345 Query: 320 DEPLALVKDLKANGANTVIGPLNWD-EKGDLKGFDFGVFQWHADG 363 EP AL++ LK + G D E + ++ + + DG Sbjct: 346 TEPDALIEVLKGISLQSPRGSFTMDPETHNPI-QNYYIGENARDG 389 >UniRef50_D1C8R8 Extracellular ligand-binding receptor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8R8_SPHTD Length = 438 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 134/365 (36%), Gaps = 22/365 (6%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG-----DKLVGVEYDDAC 76 + ++ V +++G A G E + + +N +GGI G + + YDD Sbjct: 73 QGEPYRIGAVLSITGGAATLGAPERDALQLLQDQVNEQGGILGPDGLRHPVEVIIYDDQS 132 Query: 77 DPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ 135 D QAV +++ +D + +I S ++ A D+ + MIS A++ +TQ + Sbjct: 133 DESQAVLAVTRLIESDQVPAIICCSQSGTSLAAVDVVTRNEVPMISL-ASSETITQPVEE 191 Query: 136 --HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 + A + Y RI ++ +YG+ ++ + ++V Sbjct: 192 RYWAFKPAWDNLQVSERLMLYFQRE-GITRIGLLSVSTEYGDSGRNALHELADDYGVSIV 250 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 + G D + + R++ + + V PE ++ R +G+ + V Sbjct: 251 VDERFNPGTTDVTTHLNRVRTSDAEAVVVYALVPESVVAMKNYRDLGMDIPIVFTNSVAT 310 Query: 254 ASLSNIAGDAAEGMLV---------TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITY 304 + AG AEG +V T+P Q + + +P + + Sbjct: 311 PAFIEAAGPLAEGAIVPAGKIIVYDTLPDSDHQKEVLEQFAVEYQERYGEPPNTFAGHAW 370 Query: 305 AAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWD-EKGDLKGFDFGVFQWHAD 362 A A E+ G +P A+ +++ + G L + E+ + V D Sbjct: 371 DAFWLYVRAFEKHGP-DPAAIRDEIEQTSDFVGITGVLTFSPERHTGFQTEDMVMVVVQD 429 Query: 363 GSSTA 367 G A Sbjct: 430 GRFVA 434 >UniRef50_A8LXP7 Extracellular ligand-binding receptor n=3 Tax=Salinispora RepID=A8LXP7_SALAI Length = 383 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 103/384 (26%), Positives = 167/384 (43%), Gaps = 22/384 (5%) Query: 1 MKRN------AKTIIAGMIALAISHTAMADDI--------KVAVVGAMSGPIAQWGDMEF 46 M+R A + A +IA A A D K+A+ GA SGP + Sbjct: 1 MRRKYVRALGAMGLSAALIAAAGCQAAEDDTAGGSGDCGGKIAMFGAYSGPNSGLAIPAL 60 Query: 47 NGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSST 105 A+ A+K N ++ E+D DP +A VAN++ D VIG S + Sbjct: 61 KSAQLAVKQHNEAN--PDCEVTLQEFDTKGDPTEATPVANRVAGDASFLGVIGGAFSGES 118 Query: 106 QPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIA 165 + D+YE ++M+SP +T ELT G + R G D+ QG AA Y+ + V+ +++ Sbjct: 119 KATMDVYEAAEMVMVSPSSTAIELTAGGNEVFHRVVGNDAVQGAAAAVYLRDVVRARKVF 178 Query: 166 IIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGY 225 +I+D YG G+ + L D + + +F+A I+++K D + YGGY Sbjct: 179 VINDGTTYGAGITDELTRALGELAG---GTDQVQEKQVNFAATISKIKAAAPDAIAYGGY 235 Query: 226 YPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIV 285 E +++Q R G+ F+G +G+ + S AG +AEG +VT D A Sbjct: 236 SNEAAPLVKQMREAGVTATFLGLDGIYDPSFPEGAGASAEGAIVTCLCLPS-DKAGGTFA 294 Query: 286 DALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDE 345 +A+ P GP+ + A L L G+ L+ + + V L +DE Sbjct: 295 ADFEAEYGVPPGPFGAEGFDAANVLIEGLAE-GNTTRKDLLAWVDSYDKEGVSKSLKFDE 353 Query: 346 KGDLKGFDFGVFQWHADGSSTAAK 369 GD+ + + G A+ Sbjct: 354 NGDVDKSRVVTWAYEIKGGEITAQ 377 >UniRef50_A8UVG6 Putative branched-chain amino acid transporter substrate-binding protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVG6_9AQUI Length = 394 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 82/354 (23%), Positives = 159/354 (44%), Gaps = 13/354 (3%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK-GDK---LVGVEYDDA 75 + +++ + +G A+ G++ G + +N++GG+K GDK + V YDD Sbjct: 18 ALSQEVLRLGAAVSFTGKYAKEGELLKKGYELWKETVNSRGGVKVGDKRYRVEIVYYDDQ 77 Query: 76 CDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 DP+ + K++ +GI++++G SS ++ + E LM+ G + ++ ++GY Sbjct: 78 SDPRTTAKLVEKLITEEGIRFILGPYGSSQVFASAGVVEKHRALMVQGGGASSKIYKQGY 137 Query: 135 QHIMRTAGLDSSQGPTAAKYILE-TVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 +H+ + S G + + KP+ +AII++K + E AR K VV Sbjct: 138 KHVFGVFNVASDYGKNLIELAVSLKPKPKSVAIIYEKDIFSEDAARGALKTAKRHGLRVV 197 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG-PEGVG 252 F+ G +D S+L+ +L+ + + V G++ + +++Q + + +F+G G Sbjct: 198 LFESYPKGTQDLSSLMLKLRLKKPEVVIGAGHFKDSVLVVKQLKQFRINPKFLGLTVGPP 257 Query: 253 NASLSNIAGDAAE---GMLVTMPKRYDQDP---ANQGIVDALKADKKDPSGPYVWITYAA 306 + G AE G + +DP + +G V A + + + AA Sbjct: 258 VPAFVKALGKDAEFIFGPVQWTKAFSYKDPLFGSTRGYVKAFRKKYGEEPEYHAAGGTAA 317 Query: 307 VQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 +L ALER GS + + + L + T G + +DE G + V Q Sbjct: 318 ALALQLALERAGSLDIDRVREALLSMKEETFYGIIGFDETGKINTKPMAVIQIQ 371 >UniRef50_D1CEZ7 Extracellular ligand-binding receptor n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CEZ7_THET1 Length = 453 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 90/373 (24%), Positives = 161/373 (43%), Gaps = 31/373 (8%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDAC------D 77 + + + M+GP NG + A+++ K G G K+ DDA Sbjct: 79 ETLLIYSSLPMTGPSRVQTVSVVNGMKLALQEHGGKAG--GYKVEFKALDDATAAAGKWT 136 Query: 78 PKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ-- 135 ++ AN+ + DG +G S + + I + GI MISP T LTQ G Sbjct: 137 QEKETENANRAIRDGATVYLGTFNSGAAAISIPILNEAGIPMISPANTAINLTQPGPPDP 196 Query: 136 ------------HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183 + R D+ QG AA + E + +++ +++D++ YG GLA+ ++ Sbjct: 197 KLYESLYRNGPRNYFRVVPADNLQGTAAANWAKE-LGAKKVYVLNDQEVYGLGLAQVFRE 255 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG-QMLRQARSVGLK 242 + V+ F+GI +++L+ ++ + D VY+GG G Q+++ R + Sbjct: 256 HAQKIGLEVLGFEGIDPQAGSYASLMQKIVDKGADLVYFGGLVETGGTQLVKDLRDIEPD 315 Query: 243 T---QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ--DPANQGIVDALKADKKDPSG 297 +FMGP+G+ +S + AGDAAEG T+ + + K Sbjct: 316 PEKIKFMGPDGILESSFIDGAGDAAEGAYGTVAAAPPDKLTGPGKEFYENYKKTFGSEPE 375 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGV 356 PY + A+ + A+++ S +P ++K L G N +G ++D++GD + Sbjct: 376 PYAIFGHDAMLAALLAIDKACSKDPKDVLKALNNLGTVNGALGKWSFDKRGDTTLRTYHG 435 Query: 357 FQWHADGSSTAAK 369 +Q DG K Sbjct: 436 YQVK-DGKWVWVK 447 >UniRef50_Q2J3V7 Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2J3V7_RHOP2 Length = 406 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 72/374 (19%), Positives = 142/374 (37%), Gaps = 18/374 (4%) Query: 5 AKTIIAGMIALA----ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 +I G+ ALA IS + D IK+ ++GP+A + G + N G Sbjct: 11 RLSIPLGIAALASGIQISAASADDVIKIGAPLPITGPLAPEAIKQQQGYNLWAEQANKAG 70 Query: 61 GI----KGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDE 115 GI K K+ V D + +AV +++ + +V S + + AS + E Sbjct: 71 GISVGGKKYKVEIVYTDYQSNTPRAVQATEQLITQNNVNFVFSPFGSGAAKAASTVSEKH 130 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK-PQRIAIIHDKQQYG 174 + ++ A++ ++ +GY+++ T + + + I V +++AI+ + Sbjct: 131 KVPTLAATASSSQVYDQGYKYLFGTFTPNDTLTTPLTEMIKAKVPEVKKVAILARNDLFP 190 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 +A+ ++ KA VV+F+ G D SA ++ +K ++ +++ GY ++ + + Sbjct: 191 LAIAQEMEKSAKANGLEVVYFEKYAIGTLDHSATLSSIKAQSPQWIFVTGYTNDLLLVRK 250 Query: 235 QARSVGLKTQFMGPE-GVGNASLSNIAGDAAEGMLVTMPKRY-------DQDPANQGIVD 286 Q +K + G + G AE + D + V Sbjct: 251 QMIDQQMKAPVVSMIAGPAYQEFIDALGKGAENVSSAAWWHPAARYDGKDIFGSTANFVK 310 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEK 346 K A+E+ GS + + +L T GP+ + Sbjct: 311 LFKDKYNAEPDYAHASAALCGALFQIAIEKAGSIDRDKVRDELAKMDVVTFFGPVKFGAN 370 Query: 347 GDLKGFDFGVFQWH 360 G + D VFQ Sbjct: 371 GQINSLDPPVFQIQ 384 >UniRef50_B8G0I4 Extracellular ligand-binding receptor n=18 Tax=Bacteria RepID=B8G0I4_DESHD Length = 396 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 86/349 (24%), Positives = 152/349 (43%), Gaps = 16/349 (4%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 A K+ G ++G A +G+ NGA+ A+ +INA GGI + DD D + Sbjct: 41 PAATAAFKIGGTGPLTGGAAIYGNAAKNGAQIAVDEINALGGI---QFELKYEDDEHDAE 97 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 +AV NK+ + G++ +G + S+ S + I ++P A+ P + + G +I + Sbjct: 98 KAVNAYNKLKDWGVQMSLGSVTSTPGVATSAEMFSDRIFALTPSASAPAVIE-GKDNIYQ 156 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGI 198 D +QG +A+YI + +IAII+ Y +G+ + K N +V Sbjct: 157 MCFSDPNQGSASAQYIADKKLGTKIAIIYKNDDVYSKGIYNTFVSKAKELNLEIVSTTTF 216 Query: 199 TAG-EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV-GNASL 256 T + DFS +A KK D ++ YY + +QA+S+ ++ G +G+ G +L Sbjct: 217 TEDSQTDFSVQLADAKKNGADLIFLPMYYTPASLIFQQAKSMDYSPKYFGVDGMDGILTL 276 Query: 257 SNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 N AEG+++ P D D V + K+ + Y V + A+E Sbjct: 277 ENFDKSLAEGVMLLTPFSADATDERTVNFVKKYQELFKETPNQFAADGYDVVYAYKKAIE 336 Query: 316 RTG-------SDEPLALVKDLKANGANTVIG-PLNWDEKGDLKGFDFGV 356 G +D LV+ + + G + W + G++ G+ Sbjct: 337 AAGITPDMKAADICEKLVQVFPTISVDGLTGEKMTWAKTGEVSKKPKGM 385 >UniRef50_C5EWJ8 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWJ8_9FIRM Length = 392 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 75/342 (21%), Positives = 140/342 (40%), Gaps = 8/342 (2%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 + IK+ + ++G A++G G ++AI +IN KGGI G K D D Sbjct: 32 AAPGDKSVIKLGGLAPLTGNYAEYGKGFQIGFQKAIDEINEKGGINGHKFEIEIKDTQGD 91 Query: 78 PKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 + +A D + ++G S + + ++I + GI+ +SP A+ P+ ++ Sbjct: 92 AVVSSNMATNFAEDESVMAILGDFTSGACKANAEIVDRYGIVQLSPTASAPDYANMS-KY 150 Query: 137 IMRTAGLDSSQGPTAAKYILET-VKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 G + P AKYIL+ + Q+IA+I +G + + + V Sbjct: 151 CFSIMGRQDVEAPYLAKYILKKYLGAQKIAVIRVDSDWGLSCYDNFMIQAEKEGLD-VTV 209 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 + GEKDFS+LI +++ + D + + + QA + G Q + + Sbjct: 210 EKYATGEKDFSSLITKMRSIDPDCLVVMDQGDSVAAIFNQADAAGWDIQHVALGPGTSEQ 269 Query: 256 LSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 L + ++VT P +D++ + + + Y V +A A+ Sbjct: 270 LIKQL-TTPDNLIVTSPFFFDENNEELSSWAKWFEGEAGFAPTIHPACAYDCVYLIANAV 328 Query: 315 ERTGSDE--PLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 E+ G E A+ + L + V G LN+ GD++ Sbjct: 329 EKIGDGEITRDAIQQALAESQNTGVTGALNFTPDGDIERQYM 370 >UniRef50_Q7WED6 Putative leu/ile/val-binding protein n=2 Tax=Bordetella RepID=Q7WED6_BORBR Length = 402 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 78/370 (21%), Positives = 140/370 (37%), Gaps = 30/370 (8%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVG-VEYDDACDPKQAV 82 D IK+ + A++GP ++G+ A++ NAKGGI G K+ + DD +P +AV Sbjct: 27 DTIKIGMTSALTGPYNEFGEGNRRAVELAVEQWNAKGGINGKKIEIAMLLDDQLNPDRAV 86 Query: 83 AVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG-------Y 134 I+++ I +IG S T D+ + +G ++P A P +T G Sbjct: 87 QNIRAILDNKDIVGIIGPAGSGPTLAVIDMVQADGRPYMNPIAQTPVVTYPGEKTGEKPR 146 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANA-NVV 193 ++ A + + +Y+ + +R+ IIH+ YG + + V Sbjct: 147 PNVFSFALQNDIEAVAMGEYLAKQF--KRVGIIHESTAYGVTGVDYLAASIAKNGGAKPV 204 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 D G +D +A +AR+K+ N+D + G ++ + R + + + G Sbjct: 205 ATDSYNQGAQDMTAQVARMKRANVDAIAAIGLGKDLAVLRRTMARLNVNVPLVASNGALG 264 Query: 254 ASLSNIAGDAAEGMLVTM--PKRYDQDPANQGIVDALKADKK-------DPSGPY----- 299 AG+ G L TM A KA DP P Sbjct: 265 QPYQEGAGELTLGTLGTMIGAFGNPMRAPAADFAKAYKAKYGTDRWWGNDPENPQLFMAI 324 Query: 300 -VWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDE--KGDLKGFDFG 355 V Y A L + S +P A++ +++ V + + ++ Sbjct: 325 SVSNGYDAANILFEGIRLANSTDPKAVIAAIESIKDYQGVNTAYTFSKERHHGIETDGVK 384 Query: 356 VFQWHADGSS 365 VF++ G Sbjct: 385 VFEYVKKGDK 394 >UniRef50_A8F651 Extracellular ligand-binding receptor n=2 Tax=Thermotogaceae RepID=A8F651_THELT Length = 387 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 137/359 (38%), Gaps = 14/359 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAM-ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK+ + A + L ++ + +D I V A+SG A G G + +N Sbjct: 1 MKKFLTLLAALVCVLVLAEVGVYSDKIVVGSFQALSGSYAIIGQEMSKGMKAYFNWVNKN 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 G+ G K+ + DD +P + V ++V +D + ++G L + D E + Sbjct: 61 SGVYGRKIELIIADDQLNPSKTVVEVKRLVESDKVFAIVGGLGTYGCLAVMDYLEQNKVP 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 + GA L ++I + +G AK++++ + ++IAI++ G+ Sbjct: 121 FVYQGAGTSLLVMPPKKYIFGVQPDYTLEGQLIAKFLVKELGKKKIAILYMANDIGKEGY 180 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + L++ N V E D+SAL + N + + G + + ++ R Sbjct: 181 AAALSRLQSYNLKPVVEISYNPAETDYSALAVDVLNANPEAIIIYGLITDTIRWIKTLRD 240 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDAL--------KA 290 G+ + + + S + G EG+ +T P V + Sbjct: 241 YGVTSDIVTIYPNADPSFVTLGGKYVEGIYLT-GWVPLATPDKPEFVRDYERAVAIFQET 299 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSD-EPLALVKDLKA-NGANTVIGP-LNWDEK 346 K+ Y + A + L R GSD LVK L++ + N ++ + W Sbjct: 300 YPKEIPSSYAVAGFIAAEVFVQGLLRAGSDLTREGLVKALESFDHWNGILAKDITWGPN 358 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B5YDP1 Branched chain amino acid ABC transporter n=2 Ta... 392 e-107 UniRef50_Q3A9Y7 High affinity branched-chain amino acid ABC tran... 380 e-104 UniRef50_P04816 Leucine-specific-binding protein n=310 Tax=Prote... 378 e-103 UniRef50_A6M3G8 Extracellular ligand-binding receptor n=3 Tax=Cl... 378 e-103 UniRef50_B8J0V3 Extracellular ligand-binding receptor n=1 Tax=De... 373 e-102 UniRef50_A5TY68 Branched chain amino acid ABC superfamily ATP bi... 372 e-101 UniRef50_B1ZYR7 Extracellular ligand-binding receptor n=3 Tax=Ve... 369 e-101 UniRef50_B4UJL7 Extracellular ligand-binding receptor n=12 Tax=B... 368 e-100 UniRef50_A6LX40 Extracellular ligand-binding receptor n=3 Tax=Cl... 366 e-99 UniRef50_A4JSR3 Extracellular ligand-binding receptor n=11 Tax=c... 365 1e-99 UniRef50_C6JQZ8 Leucine-, isoleucine-, valine-, threonine-, and ... 365 1e-99 UniRef50_D2RMU5 Extracellular ligand-binding receptor n=5 Tax=Ve... 363 5e-99 UniRef50_B2JSU3 Extracellular ligand-binding receptor n=2 Tax=Bu... 363 8e-99 UniRef50_Q2RFK5 Extracellular ligand-binding receptor n=3 Tax=Cl... 361 2e-98 UniRef50_C9KMT7 Branched-chain amino acid ABC transporter, amino... 360 4e-98 UniRef50_A8IDI7 Amino acid ABC transporter substrate binding pro... 360 6e-98 UniRef50_A4XM95 Extracellular ligand-binding receptor n=4 Tax=Cl... 359 1e-97 UniRef50_C2CF86 Branched chain amino acid ABC superfamily ATP bi... 358 2e-97 UniRef50_B1L6B9 ABC-type branched-chain amino acid transport sys... 355 1e-96 UniRef50_A1HU78 Extracellular ligand-binding receptor n=1 Tax=Th... 354 3e-96 UniRef50_Q2YLF8 Leu/Ile/Val-binding protein homolog 1 n=80 Tax=P... 354 4e-96 UniRef50_Q3JQA3 Periplasmic ligand binding lipoprotein n=74 Tax=... 353 6e-96 UniRef50_C7HSH7 Branched-chain amino acid ABC superfamily ATP bi... 350 6e-95 UniRef50_Q399U6 ABC branched chain amino acid family transporter... 349 9e-95 UniRef50_A8U523 Putative ABC transporter, branched chain amino a... 348 1e-94 UniRef50_A5N0V5 LivK n=2 Tax=Clostridium kluyveri RepID=A5N0V5_C... 347 3e-94 UniRef50_C6J274 Branched-chain amino acid transport system,subst... 346 5e-94 UniRef50_D1B6I2 Extracellular ligand-binding receptor n=2 Tax=Sy... 346 9e-94 UniRef50_A5HYZ7 Branched-chain amino acid transport system,subst... 346 9e-94 UniRef50_B1HNQ1 Branched chain amino acid ABC transporter (Subst... 346 1e-93 UniRef50_B9Z602 Extracellular ligand-binding receptor n=1 Tax=Lu... 345 2e-93 UniRef50_Q316T7 Amino acid ABC transporter, periplasmic-binding ... 344 4e-93 UniRef50_B0TD42 Branched chain amino acid abc transporter, amino... 343 4e-93 UniRef50_A1KBY9 Probable leucine-specific binding protein n=2 Ta... 343 6e-93 UniRef50_Q13IE6 ABC branched chain amino acid family transporter... 343 9e-93 UniRef50_Q2YLG0 Leu/Ile/Val-binding protein homolog 2 n=42 Tax=B... 340 4e-92 UniRef50_D1C9L8 Extracellular ligand-binding receptor n=1 Tax=Sp... 340 4e-92 UniRef50_B6WPS4 Putative uncharacterized protein n=1 Tax=Desulfo... 340 4e-92 UniRef50_B8J3K0 Extracellular ligand-binding receptor n=10 Tax=D... 340 5e-92 UniRef50_C4FV28 Putative uncharacterized protein n=1 Tax=Catonel... 340 6e-92 UniRef50_B5WAG3 Extracellular ligand-binding receptor n=2 Tax=Bu... 339 8e-92 UniRef50_Q0ATW1 Branched chain amino acid ABC transporter (Subst... 339 9e-92 UniRef50_Q11D26 Extracellular ligand-binding receptor n=3 Tax=Al... 338 2e-91 UniRef50_C0GH32 Extracellular ligand-binding receptor n=1 Tax=De... 338 2e-91 UniRef50_A0B322 Extracellular ligand-binding receptor n=3 Tax=Bu... 338 2e-91 UniRef50_C1TP01 Amino acid/amide ABC transporter substrate-bindi... 338 2e-91 UniRef50_Q8G3D4 Leu/Ile/Val-binding protein homolog 3 n=53 Tax=R... 337 4e-91 UniRef50_B1I4I1 Extracellular ligand-binding receptor n=4 Tax=Cl... 336 6e-91 UniRef50_Q7NI31 Glr2353 protein n=1 Tax=Gloeobacter violaceus Re... 336 1e-90 UniRef50_A6TPW6 Extracellular ligand-binding receptor n=1 Tax=Al... 335 1e-90 UniRef50_D1B9T5 Extracellular ligand-binding receptor n=2 Tax=Sy... 335 2e-90 UniRef50_C4XSP4 ABC transporter substrate binding protein n=1 Ta... 335 2e-90 UniRef50_D2L0G3 Extracellular ligand-binding receptor n=1 Tax=De... 333 4e-90 UniRef50_D1B6L8 Extracellular ligand-binding receptor n=1 Tax=Th... 333 5e-90 UniRef50_Q141F0 ABC branched chain amino acid family transporter... 333 7e-90 UniRef50_D0LYK9 Extracellular ligand-binding receptor n=4 Tax=Pr... 333 8e-90 UniRef50_Q47JF2 Extracellular ligand-binding receptor n=142 Tax=... 333 9e-90 UniRef50_Q92ZZ6 ABC transporter, periplasmic solute-binding prot... 333 9e-90 UniRef50_C6BVT9 Extracellular ligand-binding receptor n=3 Tax=De... 331 2e-89 UniRef50_C0CMD4 Putative uncharacterized protein n=1 Tax=Blautia... 331 2e-89 UniRef50_B2JW90 Extracellular ligand-binding receptor n=1 Tax=Bu... 331 2e-89 UniRef50_A0LKN6 Extracellular ligand-binding receptor n=1 Tax=Sy... 331 2e-89 UniRef50_Q39HK1 ABC branched chain amino acid family transporter... 330 4e-89 UniRef50_Q67LV0 Branched chain amino acid ABC transporter substr... 330 4e-89 UniRef50_A4J594 Extracellular ligand-binding receptor n=2 Tax=Ba... 330 4e-89 UniRef50_Q4G268 HmgD n=1 Tax=Pseudomonas putida RepID=Q4G268_PSEPU 330 4e-89 UniRef50_D1U8G6 Extracellular ligand-binding receptor n=2 Tax=De... 330 5e-89 UniRef50_A3RVH7 Leucine-, isoleucine-, valine-, threonine-, and ... 330 5e-89 UniRef50_A1WJ16 Extracellular ligand-binding receptor n=2 Tax=Pr... 330 6e-89 UniRef50_B8FN98 Extracellular ligand-binding receptor n=12 Tax=B... 329 1e-88 UniRef50_A5CZP1 ABC-type branched-chain amino acid transport sys... 328 1e-88 UniRef50_A5IN43 Extracellular ligand-binding receptor n=9 Tax=Th... 328 2e-88 UniRef50_D1ALD8 Extracellular ligand-binding receptor n=6 Tax=Fu... 328 2e-88 UniRef50_A9BYU2 Extracellular ligand-binding receptor n=2 Tax=Co... 327 3e-88 UniRef50_Q5SIN9 Branched-chain amino acid ABC transporter, perip... 326 1e-87 UniRef50_Q39AQ6 ABC branched chain amino acid family transporter... 325 1e-87 UniRef50_D0BNJ8 Branched-chain amino acid ABC transporter amino ... 325 2e-87 UniRef50_B9Z072 Extracellular ligand-binding receptor n=2 Tax=Ch... 324 3e-87 UniRef50_C7HZL2 Extracellular ligand-binding receptor n=2 Tax=Th... 324 3e-87 UniRef50_C9ACC1 Branched-chain amino acid transporter n=3 Tax=En... 323 6e-87 UniRef50_A8MJQ2 Extracellular ligand-binding receptor n=6 Tax=Ba... 323 9e-87 UniRef50_A9AXZ7 Extracellular ligand-binding receptor n=1 Tax=He... 322 1e-86 UniRef50_A1TSM1 Extracellular ligand-binding receptor n=2 Tax=Ac... 322 1e-86 UniRef50_B9Y8T3 Putative uncharacterized protein n=1 Tax=Holdema... 322 1e-86 UniRef50_B6ISN6 Leucine-, isoleucine-, valine-, threonine-, and ... 321 3e-86 UniRef50_D1BLT9 Extracellular ligand-binding receptor n=4 Tax=Ve... 320 5e-86 UniRef50_C9R8F6 Extracellular ligand-binding receptor n=1 Tax=Am... 320 8e-86 UniRef50_Q12GM8 Extracellular ligand-binding receptor n=1 Tax=Po... 319 8e-86 UniRef50_Q0AV49 Branched-chain amino acid ABC transporter, perip... 319 9e-86 UniRef50_Q985D9 ABC transporter, binding protein n=2 Tax=Mesorhi... 319 1e-85 UniRef50_B7AA03 Extracellular ligand-binding receptor n=3 Tax=Th... 318 2e-85 UniRef50_B0UEJ1 Extracellular ligand-binding receptor n=3 Tax=Rh... 318 2e-85 UniRef50_B9JHQ3 ABC transporter substrate-binding protein n=7 Ta... 318 2e-85 UniRef50_C7RS11 Extracellular ligand-binding receptor n=1 Tax=Ca... 318 3e-85 UniRef50_Q1MR26 Branched chain amino acid ABC transporter, perip... 318 3e-85 UniRef50_B8FGX7 Extracellular ligand-binding receptor n=3 Tax=De... 318 3e-85 UniRef50_A9IHL6 Putative binding-protein-dependent transport pro... 316 5e-85 UniRef50_A6T359 ABC-type branched-chain amino acid transport sys... 316 9e-85 UniRef50_Q13IR8 ABC branched chain amino acid family transporter... 315 1e-84 UniRef50_D2AV85 ABC-type branched-chain amino acid transport sys... 315 1e-84 UniRef50_D2L0U6 Extracellular ligand-binding receptor n=1 Tax=De... 315 2e-84 UniRef50_B8IZP5 Extracellular ligand-binding receptor n=9 Tax=Ba... 315 2e-84 UniRef50_B8GBD0 Extracellular ligand-binding receptor n=5 Tax=Ch... 315 2e-84 UniRef50_A9FT17 Branched-chain amino acid ABC transporter, amino... 314 4e-84 UniRef50_A1WEQ0 Extracellular ligand-binding receptor n=1 Tax=Ve... 314 4e-84 UniRef50_B4SCM8 Extracellular ligand-binding receptor n=1 Tax=Pe... 313 5e-84 UniRef50_Q2RSC4 Extracellular ligand-binding receptor n=1 Tax=Rh... 313 6e-84 UniRef50_Q3JSD7 Outative extracellular ligand binding protein n=... 312 1e-83 UniRef50_C0CTG8 Putative uncharacterized protein n=1 Tax=Clostri... 311 2e-83 UniRef50_C9LQP4 Putative branched-chain amino acid ABC transport... 311 3e-83 UniRef50_C0D1T2 Putative uncharacterized protein n=1 Tax=Clostri... 310 4e-83 UniRef50_Q2RMX3 Extracellular ligand-binding receptor n=2 Tax=Ba... 310 6e-83 UniRef50_C5EHL3 Extracellular ligand-binding receptor n=4 Tax=Cl... 309 8e-83 UniRef50_Q2JNB6 Hydrophobic amino acid ABC transporter (HAAT) fa... 309 1e-82 UniRef50_D2LDZ1 Extracellular ligand-binding receptor n=1 Tax=Rh... 309 1e-82 UniRef50_C8X2A2 Extracellular ligand-binding receptor n=1 Tax=De... 308 2e-82 UniRef50_B1C374 Putative uncharacterized protein n=2 Tax=Erysipe... 308 3e-82 UniRef50_C0Z9I1 ABC transporter substrate binding protein n=1 Ta... 308 3e-82 UniRef50_A5CZK0 ABC-type branched-chain amino acid transport sys... 307 4e-82 UniRef50_C8SVY2 Extracellular ligand-binding receptor n=1 Tax=Me... 307 4e-82 UniRef50_A0LGK7 Extracellular ligand-binding receptor n=1 Tax=Sy... 306 7e-82 UniRef50_Q7WM42 Putative amino acid ABC transport system, substr... 306 8e-82 UniRef50_C2D7C9 Branched chain amino acid ABC superfamily ATP bi... 306 9e-82 UniRef50_A9BJ64 Extracellular ligand-binding receptor n=2 Tax=Th... 306 1e-81 UniRef50_C4XSR4 ABC transporter substrate binding protein n=1 Ta... 306 1e-81 UniRef50_A9BM94 Extracellular ligand-binding receptor n=15 Tax=C... 306 1e-81 UniRef50_C5ELH4 Predicted protein n=1 Tax=Clostridiales bacteriu... 305 1e-81 UniRef50_A5D536 ABC-type branched-chain amino acid transport sys... 304 3e-81 UniRef50_A1AQF9 Extracellular ligand-binding receptor n=1 Tax=Pe... 304 3e-81 UniRef50_C7NDV1 Extracellular ligand-binding receptor n=3 Tax=Le... 304 4e-81 UniRef50_C1CVB8 Putative branched chain amino acid ABC transport... 303 5e-81 UniRef50_C5CRE7 Extracellular ligand-binding receptor n=27 Tax=B... 303 5e-81 UniRef50_Q03M75 ABC-type branched-chain amino acid transport sys... 303 6e-81 UniRef50_A5FZN6 Extracellular ligand-binding receptor n=1 Tax=Ac... 303 7e-81 UniRef50_Q2IRP0 Extracellular ligand-binding receptor n=1 Tax=Rh... 303 8e-81 UniRef50_A4JTH7 Extracellular ligand-binding receptor n=3 Tax=Bu... 303 9e-81 UniRef50_A8TTJ6 Branched-chain amino acid ABC transporter, amino... 302 1e-80 UniRef50_B5HG53 Extracellular ligand-binding receptor n=1 Tax=St... 302 2e-80 UniRef50_A5FVF3 Extracellular ligand-binding receptor n=5 Tax=Ba... 301 2e-80 UniRef50_C0QII0 LivK2 n=1 Tax=Desulfobacterium autotrophicum HRM... 301 3e-80 UniRef50_D0D0C1 Extracellular ligand-binding receptor n=1 Tax=Ci... 301 3e-80 UniRef50_C8VXD1 Extracellular ligand-binding receptor n=2 Tax=De... 301 3e-80 UniRef50_A9KIM2 Extracellular ligand-binding receptor n=1 Tax=Cl... 300 7e-80 UniRef50_A0LIW6 Extracellular ligand-binding receptor n=5 Tax=De... 299 8e-80 UniRef50_A8IHA6 ABC-type branched-chain amino acid transport sys... 299 9e-80 UniRef50_C7H459 High affinity branched-chain amino acid ABC tran... 299 1e-79 UniRef50_B0PGR3 Putative uncharacterized protein n=1 Tax=Anaerot... 298 2e-79 UniRef50_A9KNN4 Extracellular ligand-binding receptor n=4 Tax=Fi... 297 4e-79 UniRef50_B9M5M6 Extracellular ligand-binding receptor n=1 Tax=Ge... 297 4e-79 UniRef50_A8SAA0 Putative uncharacterized protein n=1 Tax=Faecali... 297 5e-79 UniRef50_A5CZW6 ABC-type branched-chain amino acid transport sys... 297 6e-79 UniRef50_A8UX91 ABC transporter substrate-binding protein n=1 Ta... 296 8e-79 UniRef50_B9L7B1 High affinity branched-chain amino acid ABC tran... 296 8e-79 UniRef50_A0LQN2 Extracellular ligand-binding receptor n=1 Tax=Sy... 296 9e-79 UniRef50_A7HAB6 Extracellular ligand-binding receptor n=8 Tax=Ba... 293 5e-78 UniRef50_UPI00016BFE10 Leucine-, isoleucine-, valine-, threonine... 293 5e-78 UniRef50_A8R9T6 Putative uncharacterized protein n=2 Tax=unclass... 293 9e-78 UniRef50_B8IDJ0 Extracellular ligand-binding receptor n=4 Tax=Rh... 293 1e-77 UniRef50_C4XNN1 Putative ABC transporter substrate binding prote... 292 1e-77 UniRef50_C0ZKD9 Probable branched-chain amino acid ABC transport... 292 1e-77 UniRef50_B2T1G8 Extracellular ligand-binding receptor n=1 Tax=Bu... 292 2e-77 UniRef50_C0Z561 ABC transporter substrate binding protein n=1 Ta... 291 2e-77 UniRef50_Q2T506 Amino acid ABC transporter, periplasmic amino ac... 291 2e-77 UniRef50_A7IE58 Extracellular ligand-binding receptor n=3 Tax=Pr... 291 2e-77 UniRef50_B8DRY9 Extracellular ligand-binding receptor n=1 Tax=De... 291 2e-77 UniRef50_A8ZVT4 Extracellular ligand-binding receptor n=2 Tax=De... 291 3e-77 UniRef50_C9S1R9 Extracellular ligand-binding receptor n=2 Tax=Ge... 291 3e-77 UniRef50_A4ISM5 Branched-chain amino acid ABC transporter n=6 Ta... 291 3e-77 UniRef50_B8FK55 Extracellular ligand-binding receptor n=1 Tax=De... 291 3e-77 UniRef50_C8WA26 Extracellular ligand-binding receptor n=2 Tax=At... 290 5e-77 UniRef50_C5EN81 Putative uncharacterized protein n=1 Tax=Clostri... 290 5e-77 UniRef50_Q9Y8W3 Branched-chain amino acid ABC transporter, branc... 289 7e-77 UniRef50_D1U5A7 Extracellular ligand-binding receptor n=1 Tax=De... 289 9e-77 UniRef50_A0LKN5 Extracellular ligand-binding receptor n=1 Tax=Sy... 288 2e-76 UniRef50_D2L9D5 Extracellular ligand-binding receptor n=1 Tax=De... 288 3e-76 UniRef50_C8W363 Extracellular ligand-binding receptor n=1 Tax=De... 287 3e-76 UniRef50_B3E1S6 Extracellular ligand-binding receptor n=18 Tax=D... 287 4e-76 UniRef50_D1C8R8 Extracellular ligand-binding receptor n=1 Tax=Sp... 287 5e-76 UniRef50_Q21B30 Extracellular ligand-binding receptor n=2 Tax=Al... 287 6e-76 UniRef50_D2Q320 Extracellular ligand-binding receptor n=19 Tax=A... 285 2e-75 UniRef50_Q21BI4 Extracellular ligand-binding receptor n=23 Tax=B... 285 2e-75 UniRef50_B9L4C0 Branched-chain amino acid ABC transporter, perip... 285 2e-75 UniRef50_A1SHR8 Extracellular ligand-binding receptor n=1 Tax=No... 285 2e-75 UniRef50_Q2Y4K2 Putative amino acid ABC transporter, solute-bind... 285 2e-75 UniRef50_A1A0J1 Solute binding protein of ABC transporter for br... 284 2e-75 UniRef50_Q1AZK7 Extracellular ligand-binding receptor n=1 Tax=Ru... 284 2e-75 UniRef50_B3W8M3 Branched-chain amino acid ABC transporter, subst... 284 4e-75 UniRef50_Q9AQ31 40kDa leucine-binding transmembrane protein n=3 ... 284 4e-75 UniRef50_D1C6F1 Extracellular ligand-binding receptor n=1 Tax=Sp... 284 5e-75 UniRef50_B1I2N9 Extracellular ligand-binding receptor n=1 Tax=Ca... 283 6e-75 UniRef50_Q1IZ32 ABC-type branched-chain amino acid transport sys... 283 6e-75 UniRef50_A7ID05 Extracellular ligand-binding receptor n=5 Tax=Pr... 283 6e-75 UniRef50_A1VTJ7 Extracellular ligand-binding receptor n=6 Tax=Bu... 283 6e-75 UniRef50_B3ENC9 Extracellular ligand-binding receptor n=1 Tax=Ch... 283 7e-75 UniRef50_C4X495 ABC transport system periplasmic binding compone... 283 9e-75 UniRef50_A6X7H9 Extracellular ligand-binding receptor n=3 Tax=Al... 283 1e-74 UniRef50_Q5P917 Branched-chain amino acid ABC transporter, perip... 283 1e-74 UniRef50_Q6AL52 Related to branched-chain amino acid ABC transpo... 282 1e-74 UniRef50_D2RFJ3 Extracellular ligand-binding receptor n=1 Tax=Ar... 281 2e-74 UniRef50_C0CVX7 Putative uncharacterized protein n=2 Tax=Clostri... 281 3e-74 UniRef50_B2UH58 Extracellular ligand-binding receptor n=8 Tax=Bu... 281 3e-74 UniRef50_C0CV37 Putative uncharacterized protein n=1 Tax=Clostri... 281 3e-74 UniRef50_Q2YJA9 Leu/Ile/Val-binding protein homolog 5 n=41 Tax=P... 280 6e-74 UniRef50_A8S3J1 Putative uncharacterized protein n=1 Tax=Clostri... 280 7e-74 UniRef50_Q7W0W5 Putative branched-chain amino acid-binding prote... 279 7e-74 UniRef50_C7RQ13 Extracellular ligand-binding receptor n=1 Tax=Ca... 279 7e-74 UniRef50_D2B8C1 Extracellular ligand-binding receptor n=2 Tax=St... 279 9e-74 UniRef50_A0RN18 Branched-chain amino-acid ABC transport system p... 279 1e-73 UniRef50_D2SCY2 Extracellular ligand-binding receptor n=1 Tax=Ge... 279 1e-73 UniRef50_Q1AZ39 Extracellular ligand-binding receptor n=1 Tax=Ru... 279 1e-73 UniRef50_A7HUK3 Extracellular ligand-binding receptor n=6 Tax=Al... 278 2e-73 UniRef50_B8FZ96 Extracellular ligand-binding receptor n=3 Tax=ce... 278 2e-73 UniRef50_C6WB66 Extracellular ligand-binding receptor n=1 Tax=Ac... 278 3e-73 UniRef50_Q0FY58 ABC transporter substrate-binding protein n=1 Ta... 277 6e-73 UniRef50_B6WW20 Putative uncharacterized protein n=1 Tax=Desulfo... 276 7e-73 UniRef50_Q2J3V7 Extracellular ligand-binding receptor n=1 Tax=Rh... 276 7e-73 UniRef50_C8X5B7 Extracellular ligand-binding receptor n=1 Tax=De... 276 8e-73 UniRef50_A8S3D2 Putative uncharacterized protein n=1 Tax=Clostri... 276 1e-72 UniRef50_C2KVU8 Branched chain amino acid ABC superfamily ATP bi... 275 1e-72 UniRef50_A6UKD7 Extracellular ligand-binding receptor n=2 Tax=Si... 275 2e-72 UniRef50_Q4FMW4 Probable Leu/Ile/Val-binding protein n=1 Tax=Can... 275 2e-72 UniRef50_B0TAM9 Branched-chain amino acid abc transporter, amino... 275 2e-72 UniRef50_Q73K61 High-affinity branched chain amino acid ABC tran... 275 2e-72 UniRef50_A4TXB9 Branched-chain amino acid ABC transporter system... 274 4e-72 UniRef50_A0LQF9 Extracellular ligand-binding receptor n=1 Tax=Sy... 274 4e-72 UniRef50_A8KXL9 Extracellular ligand-binding receptor n=8 Tax=Fr... 273 5e-72 UniRef50_C7RP21 Extracellular ligand-binding receptor n=2 Tax=Ca... 273 6e-72 UniRef50_B1Y595 Extracellular ligand-binding receptor n=10 Tax=P... 273 6e-72 UniRef50_A6E2V4 Twin-arginine translocation pathway signal n=2 T... 273 6e-72 UniRef50_Q137Z6 Extracellular ligand-binding receptor n=1 Tax=Rh... 273 6e-72 UniRef50_Q140M5 ABC branched chain amino acid family transporter... 273 6e-72 UniRef50_A8F651 Extracellular ligand-binding receptor n=2 Tax=Th... 273 9e-72 UniRef50_C5ET85 Extracellular ligand-binding receptor n=1 Tax=Cl... 272 2e-71 UniRef50_A0LTU4 Extracellular ligand-binding receptor n=1 Tax=Ac... 271 2e-71 UniRef50_B1LX36 Extracellular ligand-binding receptor n=11 Tax=A... 271 2e-71 UniRef50_A6WC82 Extracellular ligand-binding receptor n=1 Tax=Ki... 271 2e-71 UniRef50_A4U5N4 ABC transporter substrate binding protein n=2 Ta... 271 3e-71 UniRef50_Q7M8R4 ABC TRANSPORT SYSTEM PERIPLASMIC BINDING PROTEIN... 271 4e-71 UniRef50_C9NK09 Extracellular ligand-binding receptor n=3 Tax=St... 271 4e-71 UniRef50_UPI0001B5404D ABC transporter ligand-binding protein n=... 270 4e-71 UniRef50_A7IFS3 Extracellular ligand-binding receptor n=3 Tax=Pr... 270 5e-71 UniRef50_B7KWM3 Extracellular ligand-binding receptor n=9 Tax=Pr... 270 5e-71 UniRef50_A1WRT6 Extracellular ligand-binding receptor n=1 Tax=Ve... 270 7e-71 UniRef50_A0LKL5 Extracellular ligand-binding receptor n=1 Tax=Sy... 269 8e-71 UniRef50_Q74AG6 ABC transporter, periplasmic substrate-binding p... 269 9e-71 UniRef50_D1SZL8 Extracellular ligand-binding receptor n=2 Tax=Co... 269 9e-71 UniRef50_C6C245 Extracellular ligand-binding receptor n=1 Tax=De... 269 9e-71 UniRef50_A0LF76 Extracellular ligand-binding receptor n=2 Tax=De... 269 1e-70 UniRef50_C6C1M4 Extracellular ligand-binding receptor n=1 Tax=De... 269 1e-70 UniRef50_C1XGY7 Amino acid-binding protein n=1 Tax=Meiothermus r... 268 2e-70 Sequences not found previously or not previously below threshold: >UniRef50_B5YDP1 Branched chain amino acid ABC transporter n=2 Tax=Dictyoglomus RepID=B5YDP1_DICT6 Length = 376 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 99/373 (26%), Positives = 174/373 (46%), Gaps = 9/373 (2%) Query: 1 MKRNAKTIIAGMI--ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 MKR K +I ++ +L + A IK+ + ++GP+A +G NGA+ A+++ NA Sbjct: 1 MKRFVKILIIALVIFSLFVLPLQAAGTIKIGGIFPITGPVATFGISCANGAKMAVEEANA 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 KGG+ G K+ + DD ++A A K++ D + ++G + SS I + + Sbjct: 61 KGGVLGSKIELIIEDDQYKLEEAANAARKLIERDKVVAIVGGVTSSEALTIGPIAQSSKV 120 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEG 176 ++++ ATNP++TQ G I R LD QG A + + +K + A++ Y +G Sbjct: 121 VLVTGTATNPKVTQVG-DFIFRVCFLDDFQGEVMANFAYKNLKAKTAAVLTAVTSDYSKG 179 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + + A +V + + G+ DF A + ++K DFV+ GYY ++ +L QA Sbjct: 180 LADAFKKKFTAIGGKIVADESYSEGDTDFRAQLTKIKALKPDFVFVPGYYSDVAPILNQA 239 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDP 295 R +G+ F G +G + L A AAEG + D +D Q V Sbjct: 240 RELGITVPFGGGDGWDSPELLKQAAKAAEGCFYSNHFTPDAKDLLVQTFVKNYTKKYGMA 299 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDF 354 + Y A++ L +++ GS +P+ + + L + V G + +D + F Sbjct: 300 PDALAALKYDAMKFLLEGIKKAGSADPVKIKEALASMKTFRGVTGSMTFDANRNPIKSAF 359 Query: 355 GVFQWHADGSSTA 367 + Q DG Sbjct: 360 -ILQIK-DGKVVY 370 >UniRef50_Q3A9Y7 High affinity branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9Y7_CARHZ Length = 394 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 107/358 (29%), Positives = 175/358 (48%), Gaps = 12/358 (3%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 D IK+ V +SG +A +G NG A+ +INA GGI G KL ++YD+ D +A Sbjct: 35 SEDVIKIGVNLELSGNVASFGQSALNGFTLALDEINAAGGINGKKLEIIKYDNKSDNTEA 94 Query: 82 VAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-----QRGYQ 135 +VA +++ D + + G + S +T +I E + +++ ATNP++T + + Sbjct: 95 ASVATRLITQDKVPIIFGAVTSGNTMAFINIAEANKVPVLTATATNPDVTVDPKTGKVRE 154 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVF 194 ++ RT +D QG AK+ E +K +R AI+ D Y GLA+ +G KA VV Sbjct: 155 YVFRTCFIDPFQGTAMAKFATEELKVKRAAILKDNTSPYSVGLAKFFTEGFKAGGGEVVA 214 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + T ++DF +++ ++K N DF+Y YY ++GQ+++QAR +G+ F G +G + Sbjct: 215 DENFTVNDQDFRSVLTKIKSLNPDFIYVPAYYEQVGQIVKQAREMGINVAFGGSDGWDSP 274 Query: 255 SLSNIAG-DAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 L IAG DA + +T D DP + V K + + Y LA Sbjct: 275 KLIEIAGKDALKNCYITNHYSPDRDDPKVKEFVKKYKEKYGNVPDALAALGYDTGYVLAA 334 Query: 313 ALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 AL+ P A+ LK V G ++ DE+ + + ++ DG T K Sbjct: 335 ALKNAKEITPEAIKDALKNVKDVEGVTGKISIDEQHN-AKKGLVILEFV-DGKQTYRK 390 >UniRef50_P04816 Leucine-specific-binding protein n=310 Tax=Proteobacteria RepID=LIVK_ECOLI Length = 369 Score = 378 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 369/369 (100%), Positives = 369/369 (100%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG Sbjct: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI Sbjct: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS Sbjct: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG Sbjct: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV Sbjct: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH Sbjct: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 Query: 361 ADGSSTAAK 369 ADGSSTAAK Sbjct: 361 ADGSSTAAK 369 >UniRef50_A6M3G8 Extracellular ligand-binding receptor n=3 Tax=Clostridium RepID=A6M3G8_CLOB8 Length = 384 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 99/382 (25%), Positives = 175/382 (45%), Gaps = 14/382 (3%) Query: 1 MKRNAKTII-----AGMIALAISHTAMAD-----DIKVAVVGAMSGPIAQWGDMEFNGAR 50 MK++ + I A + S + D IK+ +G +SG + +G GA+ Sbjct: 1 MKKSLLSGILASAMAITLLAGCSGNSAGDGNNGDTIKIGAIGPLSGAASTYGVSVKEGAQ 60 Query: 51 QAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPAS 109 K++N GGI G K+ V DD DP ++ NK+V+D + ++G + S +T + Sbjct: 61 LLEKEVNDAGGINGKKIKFVFEDDQADPNSSMQAFNKLVDDEKVSAILGPVTSGATLAVA 120 Query: 110 DIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD 169 + I MI+P AT P +T+ G ++ R +DS QG AKY E + + A++++ Sbjct: 121 PNATSKQIPMITPTATEPTITKVGGDYMFRGCFVDSFQGEVLAKYASEKLGKKTAAVLYN 180 Query: 170 K-QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPE 228 Y +G+A S + ++A V F + DF A + ++K N D + YY Sbjct: 181 SGSDYSKGIADSFKSKFESAGGQVGEFLTYNDKDTDFKAQLTKIKSLNPDIIVLPDYYNV 240 Query: 229 MGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDA 287 +G + +QAR +G+ +QF+G +G + L+ I G A +G L D D + V++ Sbjct: 241 VGLIAKQARDMGITSQFLGGDGWESEELAKIGGKAVDGALYINHYYSGDSDENVKKFVES 300 Query: 288 LKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKG 347 K + + ++Y + L A+E+ G + A+ L + N+V G + + Sbjct: 301 YKKEYNKEPDSFAALSYDTSKILVKAIEKAGKTDGAAIKDALASMEMNSVTGNIKFGSDR 360 Query: 348 DLKGFDFGVFQWHADGSSTAAK 369 + + D A K Sbjct: 361 SAIKSA-AIIKVDGDKKVLADK 381 >UniRef50_B8J0V3 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0V3_DESDA Length = 376 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 119/368 (32%), Positives = 196/368 (53%), Gaps = 3/368 (0%) Query: 1 MKRNAKTIIAGMIALAISHTAMA-DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK+ + A + ++ A A D IK+ V GA SG +A +G N A+ I D+NAK Sbjct: 1 MKKGITLLAAMALCAVLAAPAQAEDTIKIGVAGAHSGDLASYGVPSLNAAKVVIADVNAK 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GGI G ++ V DD C P+ A A K+++D + V+GH+CS +T+ +Y D I+ Sbjct: 61 GGILGKQVELVAQDDQCKPELATNAATKLISDKVAVVMGHICSGATKATLPLYTDAKIVS 120 Query: 120 ISPGATNPELTQRGY-QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 +SP AT P LT+ G + RT D +Q + ++L +K +++A +HD YG+G Sbjct: 121 MSPSATTPGLTEDGNNPYFFRTIANDKAQARLTSDFMLNNLKVKKVAYLHDNGDYGKGFV 180 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + ++ L+ A V F+ IT DFSA++ +L++E D V +GGY P ++L+Q R Sbjct: 181 DNNREHLEKAGVKTVLFEAITPDAVDFSAVVRKLRREQPDIVVFGGYQPTASKLLQQMRR 240 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP 298 + T +GP+G+ + + +AG A+EG+ + PK PA + + G Sbjct: 241 DRVTTALLGPDGLMDEAFIKMAGKASEGVYSSYPKDTSNLPAYRAAREGHVKMFGKDPGS 300 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 + + YAA Q+L A+E+ GS + +V L++ +T +G L + + GD G ++Q Sbjct: 301 FYYNGYAATQALVNAIEKAGSTDTAKVVDALRSAPVDTPLGTLTFSKTGDAAGMALSIYQ 360 Query: 359 WHADGSST 366 DG Sbjct: 361 VK-DGKFV 367 >UniRef50_A5TY68 Branched chain amino acid ABC superfamily ATP binding cassette transporter binding protein n=15 Tax=Bacteria RepID=A5TY68_FUSNP Length = 384 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 97/381 (25%), Positives = 172/381 (45%), Gaps = 19/381 (4%) Query: 1 MKRNAKTIIAGMIALAIS----------HTAMADDIKVAVVGAMSGPIAQWGDMEFNGAR 50 MK+ T + G + T A+ IK+ +G ++GP+A +G NG + Sbjct: 1 MKKKLLTTLLGASLFLAACGGEKAADKPATTKAETIKIGAIGPLTGPVAIYGISATNGLK 60 Query: 51 QAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASD 110 AI +INA GGI G ++ D+ D +AV NK+V+ G+ ++G + S T ++ Sbjct: 61 LAIDEINANGGILGKQVELNLLDEKGDSTEAVNAYNKLVDWGMVALVGDITSKPTVAVAE 120 Query: 111 IYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK 170 + +GI MI+P T +T+ G ++ R D QG AK+ E + + +AI+ + Sbjct: 121 VAAQDGIPMITPTGTQLNITEAGS-NVFRVCFTDPYQGEVLAKFAKEKLGAKTVAIMSNN 179 Query: 171 -QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEM 229 Y +G+A + + VV +G + G+KDF A + ++ ++N D ++ YY + Sbjct: 180 SSDYSDGVANAFVAEAEKQGVQVVAREGYSDGDKDFRAQLTKIAQQNPDVLFIPDYYEQD 239 Query: 230 GQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD----AAEGMLVTMPKRY-DQDPANQGI 284 G + QAR VGLK+ +G +G + A E + D + Q Sbjct: 240 GLIAIQAREVGLKSVIVGSDGWDG--VVKTVDPSSYAAIEDVYFANHYSTKDSNEKIQNF 297 Query: 285 VDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWD 344 + K D + ++Y L A+E+ G+ + A+ K +K + G L +D Sbjct: 298 IKNYKEKYNDEPSAFSALSYDTAYLLKAAIEKAGTTDKEAVTKAIKEIQFEGITGQLTFD 357 Query: 345 EKGDLKGFDFGVFQWHADGSS 365 EK + + + D + Sbjct: 358 EKNNPVKSITVIRIVNGDYTF 378 >UniRef50_B1ZYR7 Extracellular ligand-binding receptor n=3 Tax=Verrucomicrobia RepID=B1ZYR7_OPITP Length = 384 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 91/353 (25%), Positives = 157/353 (44%), Gaps = 9/353 (2%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 A+ IK+ +++G A G G A++ INA GG+ G L + D ++ Sbjct: 26 AEPIKIGEYASLTGKEASLGQSSHQGTVLAVETINAAGGVLGRPLQLITEDTQSKAGESG 85 Query: 83 AVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 K+++ D + ++G + SS + + I + + M++P +TNP++T+ G +I R Sbjct: 86 TAVRKLISRDKVVAILGEVASSRSLEGAPICQRLKVPMVTPASTNPKVTETG-DYIFRVC 144 Query: 142 GLDSSQGPTAAKYILETVKPQRIAI-IHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 +D QGP AK+ LET+K +R+ + + Y GLA+ ++ + A +V Sbjct: 145 FIDPFQGPVMAKFALETLKAKRLGLMVSASSAYSVGLAKYFKEAIVAGGGTIVAEQRYQE 204 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G+KDF A + ++ +D ++ GYY E M++QAR +G+ G + +L + Sbjct: 205 GDKDFKAQLTAIRAAGVDAIFNPGYYNEGALMVKQARDLGITVPMFGADSWEAEALIELG 264 Query: 261 GDAAEGMLVTMPKRY-DQDPANQGIVDALKADK--KDPSGPYVWITYAAVQSLATALERT 317 G A EG+ + D P Q V A + + Y +V LA A+ R Sbjct: 265 GKAVEGVFLCSHYTPTDPAPRVQDFVRAYRQRWGAGYAPDSNASLGYDSVLVLADAIRRA 324 Query: 318 GSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 GS EP A+ L V G + D+ D + G + Sbjct: 325 GSAEPKAIRDALAQTRNFEAVTGTITIDKNRDASKSAVVI--TVKHGQFQYVQ 375 >UniRef50_B4UJL7 Extracellular ligand-binding receptor n=12 Tax=Bacteria RepID=B4UJL7_ANASK Length = 404 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 98/353 (27%), Positives = 157/353 (44%), Gaps = 9/353 (2%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 D I + VG+++G A +GD G + AI+++NAKGG+KG L YD+ P+++ Sbjct: 42 GDRILLGHVGSLTGSEATFGDSTDKGIQLAIEEVNAKGGVKGKPLALKTYDNQGKPEESA 101 Query: 83 AVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT---QRGYQHIM 138 A ++V D + ++G + S+ + + I + + MI+P +TNP +T R + Sbjct: 102 IAATRLVLQDRVSVLLGEVASTRSLAMAPIADANHVPMITPSSTNPRVTKENGRVRPFVF 161 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDG 197 R +D QG AK+ + +K R+A++ D Y GLA K +V Sbjct: 162 RVCFIDPFQGTVMAKFARDHLKISRVAVLRDVGNDYSMGLADFFLAKFKELGGTIVDDQS 221 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 AG++DF A + +K + + +Y GYY ++ + RQAR +G+K MG +G +A L Sbjct: 222 YKAGDQDFKAQLTTIKGKGPEAIYVPGYYTDVALIARQARELGMKQPLMGGDGWDSARLY 281 Query: 258 NIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 I G A EG + D P Q V K Y A + A A+ R Sbjct: 282 EIGGKALEGSYFSNHYSPEDPAPRIQDFVKRYKERFGSVPDSLAAQGYDAARIAADAMGR 341 Query: 317 TGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHAD-GSSTA 367 A+ L A V G ++ D D V + + G A Sbjct: 342 AKDLSGEAIRDALAATRDYPGVTGVISIDADHDAVKPAV-VLEIKGNAGHYVA 393 >UniRef50_A6LX40 Extracellular ligand-binding receptor n=3 Tax=Clostridium RepID=A6LX40_CLOB8 Length = 393 Score = 366 bits (940), Expect = e-99, Method: Composition-based stats. Identities = 93/351 (26%), Positives = 167/351 (47%), Gaps = 5/351 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 A D IK+ V ++G + G NG++ AIK+IN GG+ G KL V DD Sbjct: 38 GSAASGDTIKIGGVFPLTGDVPALGAAMENGSKLAIKEINDAGGVLGKKLELVSEDDQNQ 97 Query: 78 PKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 A K++ D + V+G S + P + + +D ++MI+PG+TN ++T G + Sbjct: 98 AATAPNAITKLITQDKVSAVVGTYASKCSIPMAAVAKDSKVVMITPGSTNEKVTTEGGDY 157 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFF 195 + R +D QG AK+ E +K +++A+++D Y G+++ + +AA V + Sbjct: 158 VFRACFIDPLQGQVGAKFASENLKAKKVAMLYDIGNDYCVGISKEFKKNFEAAGGTVAYE 217 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 AGE DF A + +K+ N+D +Y Y +G + +QAR +G+K F+G + + Sbjct: 218 KTYNAGESDFKAFLTEIKELNVDVIYLPDNYSTVGLIAKQAREIGIKAPFLGSDSWSDPG 277 Query: 256 LSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 L + GDA EG T + + + V+ K + + ++Y +V LA A+ Sbjct: 278 LVKVGGDAIEGSYFTDHLSLKSDNASIKKFVENYKKEYNGDPSAFSVLSYDSVYILAEAI 337 Query: 315 ERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 ++ GS + A+ + A+ +D+K + + + G Sbjct: 338 KKAGSTDENAIKDAMAKLDADCGTTHYKFDDKHNPIKS-VVINKVVK-GQF 386 >UniRef50_A4JSR3 Extracellular ligand-binding receptor n=11 Tax=cellular organisms RepID=A4JSR3_BURVG Length = 383 Score = 365 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 121/377 (32%), Positives = 190/377 (50%), Gaps = 9/377 (2%) Query: 1 MKRNAKTIIAGMIALAI----SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M R + + AL S A +K+ VG ++GP+A+ G GA+ A+ + Sbjct: 1 MNRRYWLLSLAVCALGTHMTSSRAADPQVVKIGFVGPLTGPVARVGKDLQYGAQLALDEE 60 Query: 57 NAKG-GIKGDKLVGV--EYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYE 113 NA+ I G + V DD DP+ A+ VA K+V+DG+ VIGH S + PAS +Y Sbjct: 61 NARHPTIGGKPVTFVLDVQDDQADPRVAIQVAQKLVDDGVVGVIGHYNSGCSIPASTVYH 120 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 + MI+PG+TNP+LT++GY+++ RT G D G A +++E +K +RI II D+ + Sbjct: 121 QANVAMITPGSTNPQLTKQGYKNVFRTMGHDGIGGVVAGHFVVEQMKAKRIGIIDDRTAF 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+GLA + + G+K AN VV + DF A++ LK +N+D +++GG + ++ Sbjct: 181 GQGLADAFEKGVKEANGYVVDREFTNDKAVDFRAILTTLKSKNVDLIFFGGLDEQGAMLV 240 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADK 292 +Q RS+G+ Q G + + + IAG AA+G P D+ PA Q KA Sbjct: 241 KQMRSLGMPAQLFGAGALKSNAFLQIAGAAADGTQDLEPGPALDKLPAAQQFGKRYKARF 300 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 Y Y A +L A+ S + +V +L V G + +D GDL Sbjct: 301 NQDVELYAPFAYDAALALIKAIHSADSLDRGKIVDNLSKVTVTGVTGKITFDPYGDLIKP 360 Query: 353 DFGVFQWHADGSSTAAK 369 + +FQ G + K Sbjct: 361 PYTLFQVQQ-GQWRSIK 376 >UniRef50_C6JQZ8 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=2 Tax=Fusobacterium RepID=C6JQZ8_FUSVA Length = 386 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 93/357 (26%), Positives = 168/357 (47%), Gaps = 7/357 (1%) Query: 15 LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDD 74 A + + IK+ + ++G +A +G N ++ A ++INA GGI G K+ + YD+ Sbjct: 26 AAATEKKEPEVIKIGGLAPLTGGLAIYGTTASNASKLAFEEINANGGILGKKVEFIVYDE 85 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 D +AV N++V+DG+ +IG + S T ++I + + MI+P T +T+ G Sbjct: 86 KGDSTEAVTAYNRLVDDGVVALIGDITSKPTLAVAEIAAQDNMPMITPTGTQYNITEAG- 144 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVV 193 ++ R D QG A + + + + AI+ + Y +G+A+S + + +V Sbjct: 145 PNVFRVCFTDPYQGVVLANFAQQKLNAKTAAILVNNSSDYSDGIAKSFTEEAEKLGITIV 204 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 +G G+KDF A + ++ N D + YY + + QAR VG+K+ F+GP+G Sbjct: 205 GKEGYADGDKDFKAQLTKIAPTNPDVLVIPEYYEQAALIATQAREVGIKSTFIGPDGWDG 264 Query: 254 --ASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSL 310 +L A A E T D Q + + KA + + + Y A + Sbjct: 265 IAKALDKSAYGAIENSYFTNHYSTQDTSEKVQNFIKSYKAKYNEDPSAFSALGYDAAYIV 324 Query: 311 ATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 ++E+ GS + A+V+ +K + V G L +D K + + + DG+ T Sbjct: 325 KASIEKAGSTDKKAVVEAMKNINYDGVTGQLTFDAKNNPVK-AVTIIKVV-DGNYTF 379 >UniRef50_D2RMU5 Extracellular ligand-binding receptor n=5 Tax=Veillonellaceae RepID=D2RMU5_ACIFE Length = 392 Score = 363 bits (934), Expect = 5e-99, Method: Composition-based stats. Identities = 96/377 (25%), Positives = 169/377 (44%), Gaps = 21/377 (5%) Query: 1 MKRNAKTIIAGMIALAISH---------TAMAD---DIKVAVVGAMSGPIAQWGDMEFNG 48 MK K + A + ++ A D +I+V + ++G +A +G + G Sbjct: 1 MKAWKKAVGALAMTTLVASMFTGCGKKDAAKKDNGNEIRVGALFELTGNVANYGKSTYKG 60 Query: 49 ARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQP 107 + A+ INAKGGI G K+ VE D+ +P ++ A K++ D + +IG S Sbjct: 61 VQLAVDQINAKGGINGKKIKLVEADNKSEPSESGNAATKLITKDKVSVIIGPATSGCVSA 120 Query: 108 ASDIYEDEGILMISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR 163 A+ + + + +++P AT P +T + I R D QG AK+ ++T+K + Sbjct: 121 ATPVVTNSKVPLMAPVATAPGITVDEKGKVRPFIFRACFTDPFQGKLMAKFAVDTLKLKN 180 Query: 164 IAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYY 222 IAI +D Y +GL L+ VV + A ++DF + + +LK N + +Y Sbjct: 181 IAIFYDSSSDYSKGLMDVFGKTLEEKGGKVVGKEAFLAKDQDFKSALTKLKATNPEALYV 240 Query: 223 GGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA-GDAAEGMLVTMPKRY-DQDPA 280 GYY E+ ++++QAR VGL +G +G + L+ IA G+A G T D+DP Sbjct: 241 PGYYEEVSKIIKQAREVGLTCPILGSDGWDSPKLAQIAGGEALNGTYFTSAYSAQDKDPH 300 Query: 281 NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIG 339 Q + KA + + Y ++A A+++ G+ + + L G Sbjct: 301 VQQFIKDYKAKFNEEPDTFAIHAYDGTLAVAEAIKQAGTTDGTKIADALSKIKDLQVATG 360 Query: 340 PLNWDEKGDLKGFDFGV 356 D+ + + Sbjct: 361 KYTLDKDHNPVSGGIII 377 >UniRef50_B2JSU3 Extracellular ligand-binding receptor n=2 Tax=Burkholderia RepID=B2JSU3_BURP8 Length = 382 Score = 363 bits (932), Expect = 8e-99, Method: Composition-based stats. Identities = 115/377 (30%), Positives = 193/377 (51%), Gaps = 9/377 (2%) Query: 1 MKRNAKTIIAGMIALAI----SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M R + + ALA + A + +K+ VG ++GP+A+ G GA+ A+ + Sbjct: 1 MNRRTWLLRLAVCALAAQTSFAFAADPETVKIGFVGPLTGPVARVGKDLQYGAQLALDEE 60 Query: 57 NA-KGGIKGDKLVGV--EYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYE 113 NA + I G + V DD DP+ A+ VA K+V+DG+ VIGH S + PAS +Y Sbjct: 61 NAKQPTIAGKPVKFVLDVQDDQADPRVAIQVAQKLVDDGVVGVIGHYNSGCSIPASAVYH 120 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 + + MI+PG+TNP+LT++G++++ RT G D G A +++E +K +RI II D+ + Sbjct: 121 NANVAMITPGSTNPQLTKQGFKNVFRTMGHDGIGGVVAGHFVVEQMKAKRIGIIDDRTAF 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+GLA + + G+K AN N+V + DF A++ LK +N+D +++GG + ++ Sbjct: 181 GQGLADAFEKGVKEANGNIVSREFTNDKAVDFRAILTSLKSKNVDVIFFGGLDEQGAMLV 240 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADK 292 +Q RS+G++ Q G + + + IAG + E P D+ PA Q KA Sbjct: 241 KQMRSLGMQAQLFGAGALKSNAFLQIAGASGERTQDLEPGPALDKLPAAQDFGKRYKARF 300 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 Y Y A ++ A+ S + +V+ L V G + +D GDL Sbjct: 301 NQDVELYAPFAYDAALAMIKAIHDANSLDRQKIVESLAKVSLTGVTGKITFDPYGDLIKP 360 Query: 353 DFGVFQWHADGSSTAAK 369 + +F+ G + + Sbjct: 361 PYTLFEVQQ-GQWKSVR 376 >UniRef50_Q2RFK5 Extracellular ligand-binding receptor n=3 Tax=Clostridia RepID=Q2RFK5_MOOTA Length = 399 Score = 361 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 86/363 (23%), Positives = 163/363 (44%), Gaps = 14/363 (3%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG-DKLVGVEYDDACD 77 + I + V +SG +A +G + A ++IN KGG+ G K+ + D+ Sbjct: 35 GATGGNTINIGVNYELSGDVATYGTNSKDAILLAFEEINQKGGVLGGKKINAIVLDNGGK 94 Query: 78 PKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-----Q 131 ++A++ A K++ + + ++G S +T AS + + +ISP AT+P++T + Sbjct: 95 KEEAMSAAAKLITENKVVALLGPATSGATMAASTMATKYKVPIISPSATSPDVTVDPQSK 154 Query: 132 RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANA 190 + ++ R +D +Q A++ + + ++ AII+ Y +GL + ++ Sbjct: 155 KVRDYVFRVCFIDPTQAIVGAEFATKDLGAKKAAIIYSNSDEYSKGLYKVFKEEFAKDGG 214 Query: 191 NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 VV + +G++DF + R+K D +Y YY ++G+++ QAR +G+K +G +G Sbjct: 215 QVVAEESFNSGDQDFRPALTRVKDAGADLIYVPAYYGDVGKIVNQARELGIKVPMLGADG 274 Query: 251 VGNASLSNIAGDAA--EGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAV 307 + L+ AG AA T D +P Q + A KA + + Y Sbjct: 275 WDSPKLAEYAGGAANLNNTYFTNHYAASDPNPRLQAFIKAFKAKYNKEPDAFAALAYDTA 334 Query: 308 QSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 LA A+ R GS +P A+ L + + + D+ + + DG T Sbjct: 335 YLLADAINRAGSADPEAIRNALASTKDFEGITSKITIDQNHNPVKDVAIIAMV--DGKQT 392 Query: 367 AAK 369 K Sbjct: 393 LKK 395 >UniRef50_C9KMT7 Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMT7_9FIRM Length = 391 Score = 360 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 94/373 (25%), Positives = 178/373 (47%), Gaps = 9/373 (2%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 T++ G + A +++IKV M+G +A +G +G + AI +IN GG+ Sbjct: 14 LMGTMLMGGVLAGCGSQADSNEIKVGANFEMTGNVANYGAATLDGLKLAIDEINDAGGVD 73 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G K+ V D+ + +AV A K++ +D + ++G +++ S + D + +I+P Sbjct: 74 GKKITLVTADNKSEASEAVNAATKLISDDKVSVLVGPAVTANVIAESQVATDNKVPIIAP 133 Query: 123 GATNPELT---QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLA 178 AT+P++T + + R+ +D QG AK+ E +K + I D Y + L Sbjct: 134 DATSPDVTVENGKVKPFVFRSCFIDPQQGTVMAKFASENLKAKTAVIYVDNSTDYSKSLG 193 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + ++ +AA V+ + A ++DF A + +LK N D ++ YY E+G++++QAR Sbjct: 194 KVFKEKFEAAGGKVLMEEAFLAKDQDFKATLTKLKTANADVIFVPAYYEEVGKIVKQARE 253 Query: 239 VGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSG 297 +G+ +G +G ++ +++IAG DA + D+D + + V+A K Sbjct: 254 LGITCPILGTDGWDDSKVTDIAGADALNNTYFSTHYS-DKDESVKPFVEAFKNKYGHMPN 312 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGV 356 + + Y A + LA A++R GS +P + K L+ G + D+ + + Sbjct: 313 VFAALGYDAGKMLADAIKRAGSGDPEKIQKALEETKDLKVGTGTITMDKNHNPIKQAV-I 371 Query: 357 FQWHADGSSTAAK 369 Q AK Sbjct: 372 LQNKDGDRVMVAK 384 >UniRef50_A8IDI7 Amino acid ABC transporter substrate binding protein n=36 Tax=Alphaproteobacteria RepID=A8IDI7_AZOC5 Length = 403 Score = 360 bits (924), Expect = 6e-98, Method: Composition-based stats. Identities = 142/339 (41%), Positives = 199/339 (58%), Gaps = 2/339 (0%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ V G M+GP A +G NG QA+ DINA GGI G K+ DDA P Q +VA Sbjct: 62 VKLGVAGPMTGPNAAFGAQLKNGVEQAVTDINASGGILGQKIQVFVGDDASTPAQGTSVA 121 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 NK ++DG+KYV+GH S + P S YE+ GIL I+P +TNP T+R ++ RT G D Sbjct: 122 NKFISDGVKYVVGHFNSGVSIPTSTNYEEGGILQITPASTNPTFTERKLWNVFRTCGRDD 181 Query: 146 SQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDF 205 QG A +YIL+ +K ++IAI+HDK YG+GLA Q + V ++GIT GEKD+ Sbjct: 182 QQGAVAGEYILKNLKDKKIAIVHDKTPYGKGLADETQKAINKGGVKEVVYEGITPGEKDY 241 Query: 206 SALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAE 265 SAL+++LK ++ +YYGG +PE G ++RQ R G+KT +G+ + IAG AE Sbjct: 242 SALVSKLKAAGVEVLYYGGLHPEAGLLVRQMRDQGMKTVLFSGDGITDKEYWTIAGPGAE 301 Query: 266 GMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLAL 325 G L+T ++ A + +VD KA YV +YAAVQ + A E T S +P + Sbjct: 302 GTLMTFGPDPRKNAAAKEVVDRFKAK-GIDPEGYVLYSYAAVQIIKQAAEATKSLDPKKV 360 Query: 326 VKDLK-ANGANTVIGPLNWDEKGDLKGFDFGVFQWHADG 363 + NTV+GPL +D+KGDL D+ V+ W G Sbjct: 361 ADYMHSGATFNTVLGPLAFDKKGDLTKLDYVVYVWKDGG 399 >UniRef50_A4XM95 Extracellular ligand-binding receptor n=4 Tax=Clostridia RepID=A4XM95_CALS8 Length = 393 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 79/351 (22%), Positives = 163/351 (46%), Gaps = 11/351 (3%) Query: 17 ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDAC 76 + + + +++ V +SG +AQ+G G + A+++IN KGG+ G K+ V +D+ Sbjct: 28 FAFASSSKTVRLGVNLELSGAVAQYGQRTLEGLKMAVEEINKKGGVLGKKIELVVFDNKS 87 Query: 77 DPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT----- 130 D +A+ +A ++ + + ++ + S +T+ AS + ++S AT+ +T Sbjct: 88 DKTEALNIATRLATKENVLALLSPVTSGATKSASIAATRYRVPLVSATATDDSVTIDERT 147 Query: 131 QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAAN 189 + ++ R DS QG A + L+T+K + AI+++ Y +GL ++ ++ Sbjct: 148 GKTKAYVFRICFNDSFQGSVMANFALKTLKVKTAAILYNAASDYSKGLYKNFKETFTKGG 207 Query: 190 ANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPE 249 VV + GE+DF+ ++ +++ + D ++ YY + G +++QAR +G+ +G + Sbjct: 208 GKVVAEEAFQQGEQDFNGILTKIRDKKPDVIFTPVYYDDAGLIIKQARELGMWMPILGTD 267 Query: 250 GVGNASLSNIAG-DAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAV 307 G + + AG A + + D D Q V K K + Y Sbjct: 268 GFDDPKVVEKAGKKYATNIFFSTHYSSQDTDKRVQDFVKRYKQKYKIEPNALSALGYDLG 327 Query: 308 QSLATALERTGS-DEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGV 356 +A A++R GS + L + L+ + G ++ D K + K + Sbjct: 328 YFMADAIKRAGSTTDREKLRRALENTKNFVGLTGIISIDSKHNAKKSAVII 378 >UniRef50_C2CF86 Branched chain amino acid ABC superfamily ATP binding cassette transporter binding protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2CF86_9FIRM Length = 389 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 20/381 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD------------DIKVAVVGAMSGPIAQWGDMEFNG 48 M + ++A + A S D IK+ G ++GP++ +G NG Sbjct: 1 MLKKKFGLMALIALFAFSSCGNKDKASDGKASEDSKVIKLGNSGPLTGPLSVYGKTCQNG 60 Query: 49 ARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPA 108 + AI +IN GGI G ++ DD + +AV NK++ D + ++G + S T Sbjct: 61 IQLAIDEINKNGGIDGKQVEWTGLDDKGEITEAVTNYNKLMEDKVNAILGGIPSKPTLAM 120 Query: 109 SDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII- 167 ++ + I+ I+P T +T+ G ++ R D QG A + + +K +++AI+ Sbjct: 121 AESAAKDEIVYITPTGTQANITE-GKDNVFRVCFTDPFQGEVLANFAADKLKAKKLAILR 179 Query: 168 HDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYP 227 + Y G+A ++ K A VV + + DF A + ++K EN+D + YY Sbjct: 180 NQSSDYSMGVADVFKETAKKAGMEVVADESYGDNDTDFKAQLTKIKSENVDVLLIPDYYE 239 Query: 228 EMGQMLRQARSVGLKTQFMGPEGVGN--ASLSNIAGDAAEGMLVTMPKR-YDQDPANQGI 284 ++ + Q R G+K +G +G + + + EG + D Q Sbjct: 240 KVALISSQVRDSGIKATLLGADGWDGVLSVMDQSSFKDVEGSYFSNQFSLDDPSEKCQKF 299 Query: 285 VDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWD 344 + K K+ + Y V A+E + + +VK LK + + G +D Sbjct: 300 IKDYKEKYKEDPTTFAAEGYDTVYLYKQAVEEAKTTKWDEVVKALKNIKFDGITGSFKFD 359 Query: 345 EKGDLKGFDFGVFQWHADGSS 365 E + + + DG Sbjct: 360 ENNNPRKTAKII---KIDGGK 377 >UniRef50_B1L6B9 ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6B9_KORCO Length = 401 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 86/374 (22%), Positives = 161/374 (43%), Gaps = 10/374 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAM--------ADDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 M R +A ++ + ++ A +K+ ++ ++G +A+ G A A Sbjct: 3 MSRGVLIGLAAIVVILVAAAVFFLTMQPKEAGTVKIGLIAPLTGSLAEHGLDMKQAALLA 62 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDI 111 +++IN+KGGI G K+ V D AC A A K++ D + ++G CS+ T Sbjct: 63 VEEINSKGGILGKKVELVIEDTACKADLATAAVQKMITQDNVYAIVGEYCSTVTLAVQPT 122 Query: 112 YEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ 171 + L++ P + ++T++GY++ R+ Q A +I+E +KP+ A++ Sbjct: 123 IMENKKLLLVPVSVATKITEQGYKYTFRSCANQWMQTTQRADWIVEHLKPKTAAMLGIND 182 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 YG + + +KA +V + AG DF+ ++++K N D ++ + Sbjct: 183 DYGREGLKIWGERVKAKGVTIVAEEYFDAGTTDFTPQLSKIKAANPDVIFVVANIRDAAN 242 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKA 290 +L+QA +GL QF GV + +AGD A G++ + P Q V Sbjct: 243 ILKQAHEIGLYKQFSMLGGVTSEEFLKLAGDDALGLVHVSYFEPTSKRPVAQEFVQKFVQ 302 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 Y + A +L +E+ G+ + + + +K G + +DEKG + Sbjct: 303 KWNRTPAMYAAGVWDAFMTLKYGVEKAGTWDVDKVAEAIKTIKFEGAQGTIYYDEKGQAQ 362 Query: 351 GFDFGVFQWHADGS 364 V DG Sbjct: 363 TKVLLVQVQKVDGK 376 >UniRef50_A1HU78 Extracellular ligand-binding receptor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU78_9FIRM Length = 381 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 14/377 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD------IKVAVVGAMSGPIAQWGDMEFNGARQAIK 54 MK + ++ + A + + +A+V +SG A +G NG A + Sbjct: 5 MKLLSLVVVLIFLVAAAGCGGSSSTSGSKGNLVIAMVNPLSGDSATYGVSHKNGMELARE 64 Query: 55 DINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYE 113 +IN GGIKG ++ + +DDA DPKQA A A K + + ++G SS+T I + Sbjct: 65 EINKAGGIKGQQIEILFHDDAGDPKQAAAGAQKFADQKNVMAIVGSCLSSNTLAMVPITD 124 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 + ++ P+L+ ++ R A D+ G I + + +++AI++ Y Sbjct: 125 KAKLPHSVVSSSTPKLSGM-SKYFFRMAVQDAQVGILMGDLIAQKLGAKKVAILYPNNDY 183 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+GL ++++ LK VV A +KD+SAL+ +K + +D + G Y + G + Sbjct: 184 GKGLTAAIEETLKKHGVTVVSNQAYLATDKDYSALLTGIKAQGVDALAVAGTYTDGGLIT 243 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADK 292 +QAR +GL +G G + IAG AAEG + + DPA Q V K Sbjct: 244 KQARELGLTIPIVGGTGFYSPKFVEIAGKAAEGAIFLGAFVASNPDPAVQNFVKKYKEKY 303 Query: 293 KDPSGPYVWITYAAVQSLATALERT---GSDEPLALVKDLKANGANTVIGPLNWDEKGDL 349 + + Y + LA A+++ G+ + + + G + ++++GD Sbjct: 304 NMEPDTFAALGYDQMYVLAEAMKKAAEKGAITRENIRDAMAQTNYKGITGTVTFNDQGDW 363 Query: 350 KGFDFGVFQWHADGSST 366 ++ DG Sbjct: 364 VRP--YLYITVKDGKFV 378 >UniRef50_Q2YLF8 Leu/Ile/Val-binding protein homolog 1 n=80 Tax=Proteobacteria RepID=LIVB1_BRUA2 Length = 371 Score = 354 bits (909), Expect = 4e-96, Method: Composition-based stats. Identities = 149/372 (40%), Positives = 216/372 (58%), Gaps = 5/372 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M++ + +A +A +A AD + V + ++GP A +G GA AIK++N G Sbjct: 1 MRKTLFSGVALAAVIAFGGSAWAD-VLVGIGIPVTGPNAVYGAQIQKGAEAAIKEVNDAG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GI G+K+ DD DPKQ ++VANK DG+K+VIGH S T PAS +Y + GIL I Sbjct: 60 GINGEKIAITIGDDVSDPKQGISVANKFAADGVKFVIGHFNSGVTIPASQVYAENGILEI 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SPGATNP+ T++G + RT G D QG A +YI + K +IA+IHDK YG+GLA Sbjct: 120 SPGATNPQYTEQGLWNTFRTCGRDDQQGTVAGQYIFDHFKDAKIAVIHDKTPYGQGLADE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + L ++G+ GEKDFSALIA+LK+ ++ VY+GG +PE G ++RQ G Sbjct: 180 TKKKLNELGTKETLYEGVNVGEKDFSALIAKLKQAGVNVVYWGGMHPEAGLLIRQMADQG 239 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LK QF+ +G+ + L++IAGDA G++ T D AN ++ A + Y Sbjct: 240 LKAQFISGDGIVSNELASIAGDAVAGVMNTFGPDPRDDKANAELIKAFRDK-GFEPEAYT 298 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQW 359 +YAAVQSLA A + GS++P + K +K G TV+G L++DEKGD K + +++W Sbjct: 299 LYSYAAVQSLAQAAKAAGSNDPQEVAKAMKEKGPFKTVLGDLSYDEKGDPKLPGYVMYKW 358 Query: 360 HA--DGSSTAAK 369 DG + Sbjct: 359 EKGADGKYNYIQ 370 >UniRef50_Q3JQA3 Periplasmic ligand binding lipoprotein n=74 Tax=Burkholderiaceae RepID=Q3JQA3_BURP1 Length = 662 Score = 353 bits (907), Expect = 6e-96, Method: Composition-based stats. Identities = 102/355 (28%), Positives = 160/355 (45%), Gaps = 4/355 (1%) Query: 12 MIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDK--LV 68 A + A +++ ++G A +G NG + A+ D A+ I G Sbjct: 298 CGATGAARAADETPVRIGFAAPLTGVNAGYGKDLQNGVQLALDDARAQKITIAGKPARFE 357 Query: 69 GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPE 128 V DD DP+ V A +V+ + V+GH S +T PAS +Y+ GI +I P ATNP Sbjct: 358 LVVEDDQADPRIGVQAAQSLVDKKVSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPV 417 Query: 129 LTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAA 188 +T RG ++ D A +Y ++ K +RIAI+ D+ +G+G A +KAA Sbjct: 418 ITSRGLANVFMVIATDGQNAGNAGRYAVDVTKAKRIAIVDDRTAFGQGEADEFDKAVKAA 477 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 A +V + + DF A I LK +N+D V++GG ++Q + +GL QF+G Sbjct: 478 GAAIVAREYTSNQAVDFRAQITSLKSKNVDLVFFGGLDSLAANFIKQMKQLGLNAQFVGG 537 Query: 249 EGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAV 307 GV +A IAG AAEG + R DQ P + K Y Y A Sbjct: 538 GGVKDAEFIKIAGPAAEGAMAWEYGRPLDQLPQGKDFESRFKKRFGVDVLSYAQFGYDAT 597 Query: 308 QSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 + A++ G+ +P LK + G +++ G LK ++Q + Sbjct: 598 WAAIKAMQAAGTTDPSGYRPALKKIDFEGITGRISFGGDGSLKSGMSTLYQVKSG 652 >UniRef50_C7HSH7 Branched-chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Bacteria RepID=C7HSH7_9FIRM Length = 392 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 158/350 (45%), Gaps = 7/350 (2%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 +D IK+ + +GP++ +G+ GA A+ +IN GGI G K+ + YDD + + Sbjct: 38 SDTIKIGAIIPQTGPVSNYGNSSEKGALLAVDEINKNGGINGKKIEWISYDDKGEITDST 97 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 NK+ + + ++G + S S+I + +GI MI+P T +T+ G ++ RT Sbjct: 98 TAYNKLKGEKVTAIVGPITSKPALAVSEIAKKDGIAMITPTGTQGNITE-GKDNVFRTCF 156 Query: 143 LDSSQGPTAAKYILETVKPQRIAII-HDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 D QG AK+ E K +++AI+ + Y G+A + ++ ++V + Sbjct: 157 TDPYQGKLLAKFAAENQKAKKVAILRNTSSDYSNGIADEFKKEVEKLKLDLVADESYGDN 216 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN--ASLSNI 259 + DF A + ++ K D + YY ++ + QAR G+ +F+G +G + Sbjct: 217 DNDFKAQLTKIAKAKPDVLLVPDYYEKVALIAPQARDAGIDAKFIGSDGWDGVVNVMDKS 276 Query: 260 AGDAAEGMLVTMPKRYDQDPA-NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 EG + D D + V K + K+ + ++Y + L A+E+ Sbjct: 277 QLGLVEGSCFSNHFALDSDDQRVKDFVKKYKEENKEDPSAFSALSYDTIYLLKQAIEQAK 336 Query: 319 SDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 S+E +++ +KA + + G ++E + + + DG+ Sbjct: 337 SEESDKIIEKIKAIEFDGITGKFKFNENHNPIKSA-SMMEIK-DGTYKFN 384 >UniRef50_Q399U6 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=59 Tax=Bacteria RepID=Q399U6_BURS3 Length = 399 Score = 349 bits (897), Expect = 9e-95, Method: Composition-based stats. Identities = 181/347 (52%), Positives = 244/347 (70%), Gaps = 1/347 (0%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 + +K+A+ G MSG +AQ+GDM GA AI+ INA GG G+K V DDAC+PKQAVA Sbjct: 53 ETVKIAIAGPMSGSVAQYGDMVKAGALTAIEQINAAGGAGGNKFEVVMMDDACEPKQAVA 112 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ-RGYQHIMRTAG 142 VANKIV+ IKYVIGH+CS ST PASDIYE+EGI+M++P AT P+LT+ + I RT G Sbjct: 113 VANKIVSQKIKYVIGHVCSGSTIPASDIYENEGIVMVTPSATAPQLTEGKKRHFIFRTIG 172 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 D QGP AA YI+ VKP+++A++HDKQ YG+G+A SV+ L+AA VV F+GI AG+ Sbjct: 173 RDDQQGPAAAHYIINNVKPKKVAVLHDKQSYGQGIASSVKKDLEAAKIPVVLFEGINAGD 232 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 D+SA+I +LK + +DFVY+GGY+PEMG ++RQAR G+K FMGPEGVGN ++ IAG Sbjct: 233 SDYSAIITKLKSQGVDFVYFGGYHPEMGLLMRQAREQGVKATFMGPEGVGNKDVTAIAGP 292 Query: 263 AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 A+EGMLVT+P + DPAN +V A K+DP+GP+ YAAV+ +A ++ + +P Sbjct: 293 ASEGMLVTLPADFSADPANAALVKAFADKKRDPNGPFQMPAYAAVKIIADSIAGAKTTDP 352 Query: 323 LALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + + +T IG + +D +GDLK F F V+ WH D + TAAK Sbjct: 353 TKVAAYMHKTTFDTPIGKVAYDAQGDLKAFKFVVYTWHKDATKTAAK 399 >UniRef50_A8U523 Putative ABC transporter, branched chain amino acid-binding protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U523_9LACT Length = 381 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 16/369 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAM----ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 MK+ +A + LA + A AD+IK+ + +G ++ +G E N + A+K+I Sbjct: 1 MKKRLVMGVAALSLLATACGAGSGSNADEIKIGSMFEKTGEVSAYGTAEANAVKLAVKEI 60 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDE 115 N GGI K+ VEYD D +A ++A K+ D + ++G + + + ++ Sbjct: 61 NDNGGILDKKIDLVEYDTKSDNTEAASIATKLATQDEVSIIVGPATTGAVKASTPAVTRA 120 Query: 116 GILMISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-K 170 G+ +++P T+ LT + +I RT+ DS QG A++ + ++ +I D Sbjct: 121 GVSLVTPSGTDDSLTIDENGKVQPNIFRTSFQDSFQGIALAEFATNELGAKKALVIGDSS 180 Query: 171 QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 Y GL ++ + + +V + TA + DFSA++ R+K + DF++ GYY + G Sbjct: 181 SDYALGLTKAFE---GKFDGEIVAEENFTADDTDFSAILTRIKDLDFDFIFLPGYYNQAG 237 Query: 231 QMLRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKRYD-QDPANQGIVDAL 288 +++QAR +G+ +G +G GN +L +AG D + + + + +D + + A Sbjct: 238 LIIKQAREMGITQPILGADGFGNEALLELAGVDNVDDVYYSAHYSPNSEDAQVKEFIAAY 297 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKG 347 KA+ + + Y V +A A+E P AL K L+ + V G ++DE Sbjct: 298 KAEYDVDPDMFAALAYDTVYLVAQAIEAADDTTPKALTKALEDITEFDGVTGTFSFDENH 357 Query: 348 DLKGFDFGV 356 + + Sbjct: 358 NPVKSTLVI 366 >UniRef50_A5N0V5 LivK n=2 Tax=Clostridium kluyveri RepID=A5N0V5_CLOK5 Length = 378 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 151/350 (43%), Gaps = 4/350 (1%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 + ++ ++ + +++IK+ V ++G ++ G N + ++ NA GGI Sbjct: 9 SMALVLGSVVLAGCGKQSESEEIKLGAVFPLTGDVSVMGQACKNALQMLEEETNASGGIN 68 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G K+ DD P + K++N+ + V+G S + I I MIS Sbjct: 69 GKKVKFYFEDDENKPSNSANAIQKLINNNKVVGVVGSYASKCSISMGPIAASNKIPMIS- 127 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSV 181 +T+P++T+ G +++ + D+ QG A + VK + A+++D Y +GL Sbjct: 128 VSTSPKVTKNGGEYVFTSTFNDTFQGTIIADIAAKDVKAKTAAVLYDVGNDYDKGLNEFF 187 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + + V+ AG++DFSA + +KK N D + YY + + +QAR++G+ Sbjct: 188 TTNFEKSGGKVLASLTFNAGDQDFSAQLTNIKKLNPDVLVIPDYYGTVALIAKQARNLGI 247 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYV 300 + F+G +G + +L IAGDA G + D PA + + Sbjct: 248 TSTFIGGDGWDSPALFEIAGDAVNGSYFSNFFSTGDTTPAYVKFKENYEKKYNKAPDAIS 307 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 +Y A L A++ S E + LK V G +D + Sbjct: 308 ASSYNAGSLLIAAVKEAKSTEGDKIKDALKNISFEGVAGTTKYDSNRNAI 357 >UniRef50_C6J274 Branched-chain amino acid transport system,substrate-binding protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J274_9BACL Length = 375 Score = 346 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 16/376 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMA--------DDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 MKR + +A + A D I++ + +SG AQ+G NGA A Sbjct: 1 MKRFLSALAITGLAAGLLSGCGASDDSQANRDTIRIGLAAPISGTQAQYGTAFKNGAELA 60 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDI 111 IN GGI G ++ V DD D +AV VANK V D I V+GH SS+T + + Sbjct: 61 AAQINEAGGIDGKQVEIVVQDDKGDSNEAVNVANKFVTDKSILGVVGHFNSSATLATAPV 120 Query: 112 YEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ 171 Y I+ +SP ++ P +T G ++ R D+ Q A + + + ++A+I+++ Sbjct: 121 YNKNKIVQVSPSSSAPAVTNAG-EYTFRVITTDAFQADYLAGW-SKELGYSKVALIYEQS 178 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 +G GL Q VV + G+KDFS ++ +++++ D ++ GG+Y E Sbjct: 179 DFGLGLLDVYQQSAPENGVEVVAAEAYNPGDKDFSTVLTKIREKQPDAIFIGGFYNEAAL 238 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGM-LVTMPKRYDQDPANQGIVDALKA 290 + +QA+ + L F+G + + + +L ++ ++ EG L+ + + +A Sbjct: 239 IAQQAQKLNLNADFIGVDSLYSEALLDLGKESVEGFKLIGFFYPGGDNAEATRFDEEYQA 298 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDL 349 Y +Y A + A++ G + A+ L+ ++ G +++DE GD+ Sbjct: 299 KYNSKPDTYAAYSYVATSVIIKAIQEQG-TDREAIKSYLETLKDYSSATGVISFDENGDV 357 Query: 350 KGFDFGVFQWHADGSS 365 + DG Sbjct: 358 ITEPSRL--TIQDGKF 371 >UniRef50_D1B6I2 Extracellular ligand-binding receptor n=2 Tax=Synergistaceae RepID=D1B6I2_THEAS Length = 382 Score = 346 bits (888), Expect = 9e-94, Method: Composition-based stats. Identities = 107/372 (28%), Positives = 184/372 (49%), Gaps = 11/372 (2%) Query: 1 MKRNAKTIIAGMIALAISHTA-MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M+R +A ++ L++ A A+ IK+ ++ M+G A G+ N + A++ +NA Sbjct: 1 MRRFGVLFLAAVMVLSVGAWAFGAEPIKIGLLVPMTGFAAADGESALNSVKLAVEHVNAS 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G K+ V YDDA DPKQAV +A K++ D + V+G S ++ + +++DE I Sbjct: 61 GGVLGRKVQLVYYDDAADPKQAVPLAQKLINQDRVVAVVGGSYSMPSRAVAPVFDDEEIP 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 ++ A +P++T+ + R L +G AA ++ ++ +R+A++ +G LA Sbjct: 121 FVAAYAIHPDVTK--GDYTFRNGFLGKVEGQAAAYTAVKLLRGKRLAMLTSDNDFGRTLA 178 Query: 179 RSVQDGLKAA--NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 + L N +V A EKDF A +A++K+ + D ++ GYY + G ML+QA Sbjct: 179 EGFKTYLNKYAPNVPLVASLTYPASEKDFKAYLAKIKEADPDVIFASGYYFQTGPMLKQA 238 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEG-MLVTMPKRYDQDPANQGIVDALKADKKDP 295 R +G+ Q +G EG + IAG AAEG ++VT R D P Q + +A K Sbjct: 239 REMGIIAQIIGEEGADSPKTIEIAGKAAEGFVIVTNLNRDDPRPVVQKFLKEYRARYKVE 298 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLN-WDEKGDLKGFD 353 Y A + A+ R GS + A+ + N + G + +D +G++ Sbjct: 299 PDMVGASAYDAFMIIVEAIRRAGSADRKAIRDAIAKTSAYNGLTGIIRGFDSRGEVIKP- 357 Query: 354 FGVFQWHADGSS 365 Q +G Sbjct: 358 -VQVQIVRNGKF 368 >UniRef50_A5HYZ7 Branched-chain amino acid transport system,substrate-binding protein n=10 Tax=Clostridium RepID=A5HYZ7_CLOBH Length = 380 Score = 346 bits (888), Expect = 9e-94, Method: Composition-based stats. Identities = 92/350 (26%), Positives = 165/350 (47%), Gaps = 7/350 (2%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 + IKV +V +SG +AQ G N A+ A+ ++N +GGI K+ V DD +PK+A Sbjct: 34 EETIKVGLVAPLSGAMAQDGKSILNAAQLAVDEVNKEGGINKKKIELVYEDDKGEPKEAA 93 Query: 83 AVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 ++ANK +D I V+G + T IY I M+ P + P L+ ++ + Sbjct: 94 SIANKYSSDKDIMAVMGSFSAPCTLAGIPIYNKAKIPMMGPCGSAPALSGS-SEYYRKVT 152 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 D + G +K++L+ + +++AII+ YG+G+A SV + K VV + Sbjct: 153 PSDLTTGKELSKWMLKDMNYKKVAIIYVNNDYGKGVAESVDNFYKENGGQVVAKESYMPK 212 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 +DF ++I ++K +N D + G +Y + G L+QA +VG + GP + + SL ++AG Sbjct: 213 TQDFGSIITKVKSKNPDIIIMGSFYGDAGAFLKQAHNVGYNPKVAGPTPLLSKSLVDLAG 272 Query: 262 DAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 AEG+ + ++ + + K + +Y A + L +++ G + Sbjct: 273 KDAEGIFTIGSFSTNLENEKVKEFAEKYKKKYNQDPSSFAAYSYDATKILIEGIKK-GGN 331 Query: 321 EPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + + + LK G V G +++ GD + DG K Sbjct: 332 DREKINEALKNMGTYTGVTGNTKFEKSGDAEKNLIRF--IVKDGKFVEWK 379 >UniRef50_B1HNQ1 Branched chain amino acid ABC transporter (Substrate-binding protein) n=15 Tax=Bacteria RepID=B1HNQ1_LYSSC Length = 406 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 11/355 (3%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 IK+ +SG +A +G GA A+K+IN GGI G K+ ++ D+ + +A A Sbjct: 50 TIKIGANLELSGNVASYGSSIGLGAELAVKEINDAGGIDGKKIELIKVDNKSENSEATAA 109 Query: 85 ANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT----QRGYQHIMR 139 A K+ D + ++ S +T I I +++ T P +T ++ R Sbjct: 110 AIKLATQDKVVAMLAPATSGNTVATVQIANQNKIPIVTGSGTAPNITVNEDGSVNEYAFR 169 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFDGI 198 T +D QG AA + + + +AI D Y +GLA+S ++ + + +V + Sbjct: 170 TCFIDPFQGIVAANFASGELSAKNVAIFADNASDYAKGLAKSFKETMTKSGGKIVKEEAY 229 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 A + DF + +K N DF++ GYY E+G +++QAR +G+ MG +G + +L + Sbjct: 230 VAKDTDFRTQLTNIKAANPDFIFIPGYYEEVGLIVKQAREMGIDVPLMGADGWDSPTLVD 289 Query: 259 IAG-DAAEGMLVTMPKRY-DQDPANQGIVDALKADKKD-PSGPYVWITYAAVQSLATALE 315 +AG DA +T D D Q V A KA D + + Y ++ +A A++ Sbjct: 290 LAGKDALNNTYITNHYSAEDPDKKIQDFVKAFKAANGDKAPDAFNALGYDSIYYIADAIK 349 Query: 316 RTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 R GS + A+ +L A + V G + DE + V ++ +K Sbjct: 350 RAGSTDGEAIKNELAATKDLSLVTGTFSVDENHNPIKTA-TVLEFKDGKQVFNSK 403 >UniRef50_B9Z602 Extracellular ligand-binding receptor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z602_9NEIS Length = 372 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 6/368 (1%) Query: 6 KTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG-IKG 64 ++ + IS + A+ +K+ +G ++GP A WG N A+ A+ +N I G Sbjct: 4 TLLVTLLALGGISAASAAEVVKIGFIGPLTGPDAHWGKDNQNCAQLAVDTLNRSALRING 63 Query: 65 DKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 + V DD DPKQ+ A K++++ +K V+G S +T PA+ I G+ S Sbjct: 64 QPVQFELVSQDDQEDPKQSTLAAQKLLDEEVKAVVGPFTSGTTIPAARIINQAGLPQFS- 122 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 A N T +GY + R + +D+ GP A+Y L +K +RIA+I D+ Y +GLA + Sbjct: 123 VAVNATYTNQGYGNAFRLSAVDTRMGPAIAQYALSELKAKRIAMIDDRTAYSQGLADKFE 182 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 K A V+ + T G+ +FS ++ ++ D ++ + + Q + +GL Sbjct: 183 AEAKRLGAQVIRREYTTPGQNNFSPILTTIRAAKPDLLFVAMSDSQAAPLALQMKQLGLS 242 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGML-VTMPKRYDQDPANQGIVDALKADKKDPSGPYVW 301 T+ + + + + ++G +EG + ++ Q + A P Y Sbjct: 243 TKVLSGDMIQTDNFIKLSGSNSEGFMAAVAGNVLEKRSQGQDFIKRYHAKYGKPPLSYGP 302 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 Y AV +A A+++ S EP + LK V +D +GDL V+Q Sbjct: 303 QHYDAVMLVAKAMQQANSTEPGKVTAALKKISYEGVNASYRFDSRGDLIQAPITVYQVRQ 362 Query: 362 DGSSTAAK 369 K Sbjct: 363 -AKWAPVK 369 >UniRef50_Q316T7 Amino acid ABC transporter, periplasmic-binding protein n=12 Tax=Deltaproteobacteria RepID=Q316T7_DESDG Length = 393 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 114/372 (30%), Positives = 182/372 (48%), Gaps = 7/372 (1%) Query: 1 MKRNAKTIIAGMIA-LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M R + G++A + ++ TAMA +K+ ++ ++G A G N + NA+ Sbjct: 20 MSRKMTAFVLGVVATVLMAGTAMAGTVKIGLMCPLTGSWASEGQDMRNIVLMLAEQTNAQ 79 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GGI GD + V DDA DPK A A ++ G+ VIG S+ T+ + IY++ I+ Sbjct: 80 GGINGDMVEIVVEDDAGDPKTAALAAQRLSTMGVSAVIGSYGSAITEASQAIYDEMDIVQ 139 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 ++ G+T LT++G RT D QG AA + E ++IAI+HD Y +GLA Sbjct: 140 VATGSTAIRLTEKGLPLFFRTCPRDDEQGRVAAAVLKEK-GYKKIAILHDNTSYAKGLAE 198 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 LK+A VVF+D +T E+D+SA++ +LK D +++ GYYPE G +LRQ + + Sbjct: 199 ETLTLLKSAGTEVVFYDALTPNERDYSAILTKLKAAGPDAIFFTGYYPEAGMLLRQKQEM 258 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP--ANQGIVDALKADKKDPS- 296 MG + N L IAG +A G L P P + A KA Sbjct: 259 KWDVPMMGGDATNNLDLVKIAGKSAAGFLFISPPTLQDLPDKQAKDFAAAYKARYGTMPA 318 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKA--NGANTVIGPLNWDEKGDLKGFDF 354 + + A +L A+ GS +P + +K + G L+++EKGD G + Sbjct: 319 SVWSVLAGDAFIALKAAITGAGSTDPQDIAAYMKKDLKDLPGLTGSLSFNEKGDRVGDLY 378 Query: 355 GVFQWHADGSST 366 +++ +G+ Sbjct: 379 RLYRVDENGNFV 390 >UniRef50_B0TD42 Branched chain amino acid abc transporter, amino acid-binding protein n=2 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TD42_HELMI Length = 400 Score = 343 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 165/377 (43%), Gaps = 17/377 (4%) Query: 6 KTIIAGMIALAISHTAMAD------DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 ++A + S A +I + +SG A +G NG + I D+N K Sbjct: 18 VGMLASSVLTGCSSGKGAQNTPEAKEIIIGGNYELSGGNATYGTAAVNGIKLYIDDLNEK 77 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G K+ V D+ + +A VA +++ + + ++G SSST + D+ I Sbjct: 78 GGLLGKKVKFVSLDNKSEAGEASNVAARLINQEKVVAILGGAASSSTVGFVKLANDKKIP 137 Query: 119 MISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQY 173 +IS A E+T + ++ R QG A+Y L+++K ++ AI+ D Y Sbjct: 138 VISSSAVAQEVTVDETGKTRDYVFRACFTAPFQGEVMAQYALDSLKLKKAAILVDNQSPY 197 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 +G ++ +D VV +G G+KDF +++ R+K + + +Y GYY E G ++ Sbjct: 198 SKGSGKAFKDYFVKNGGQVVAEEGYVTGDKDFRSVLTRIKGRDAELIYVPGYYEEAGFIV 257 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKR-YDQDPANQGIVDALKAD 291 +QA + + +G +G + +L+ IAG + + ++ Q + A KA Sbjct: 258 KQASELVMTLPILGGDGWDSPTLAKIAGAENLNNTFFSTHYSEEEKSARVQDFIAAYKAK 317 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLK 350 + + Y A L A++R S +P + + L V G +++D + + Sbjct: 318 YGENPEALGALGYDAAAILVDAIKRANSTDPEKVREALSATKDLQAVTGTISFDAQHNPV 377 Query: 351 GFDFGVFQWHADGSSTA 367 V +G T Sbjct: 378 KSAVVVE--VKNGKFTF 392 >UniRef50_A1KBY9 Probable leucine-specific binding protein n=2 Tax=cellular organisms RepID=A1KBY9_AZOSB Length = 374 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 111/356 (31%), Positives = 177/356 (49%), Gaps = 6/356 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG---DKLVGVEYDD 74 S +K+ G ++GPIA +G GAR A++D NA+G G K V DD Sbjct: 19 SAALAQTVVKIGHAGPLTGPIAHFGKDGEMGARLAVEDANARGITLGGQKVKFELVSEDD 78 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 DP+ A VA ++ + G+K V+GH+ S ++ PAS +YE G+ +++P +T+P+LT++GY Sbjct: 79 QGDPRTATTVAQRLTDLGVKGVVGHVTSGASIPASRVYEQAGVPVVTPSSTSPKLTRQGY 138 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + R D QG AKY ET+K ++AII D+ YG+GLA + D K VV Sbjct: 139 KVTFRVIANDLQQGEATAKYAAETLKAAKVAIIDDRTAYGQGLADAFADAAKQRGLQVVG 198 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + T DF A++ ++K + D V+YGG + MLRQ R +G ++G +GV Sbjct: 199 REFTTDKSTDFLAILTKIKAKAPDAVFYGGMDAQAAPMLRQLRQLGSSAIYLGGDGVCTG 258 Query: 255 SLSNIAGDAAEGMLVTMPK--RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 + +AGDA + + P + K K Y +Y A +L Sbjct: 259 EMIKLAGDAMSDKVYCSQASLPPAKMPGGTDFLSRFKQRYKADVLLYAPYSYDAATALIE 318 Query: 313 ALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 A++ S EP + L+ V G + +D +GD++ + ++ DG +A Sbjct: 319 AMKAADSSEPAKYLPALQRVAFKGVTGEIAFDPQGDIRNGGVSMHRFR-DGKWVSA 373 >UniRef50_Q13IE6 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13IE6_BURXL Length = 376 Score = 343 bits (880), Expect = 9e-93, Method: Composition-based stats. Identities = 87/358 (24%), Positives = 152/358 (42%), Gaps = 2/358 (0%) Query: 5 AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 + LA A+ +++ ++ ++G +A G + NGA+ A+ +IN GG+ G Sbjct: 3 FALCVTAAGTLACQAARAAEPVRIGLIQPLTGSVAYNGHADVNGAKLAVAEINKAGGVLG 62 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 + D C+P V A K++ D + +IG CSSST + + + +++ Sbjct: 63 RPVELKIEDGQCNPANTVNAAEKLIQKDRVSALIGAFCSSSTAAIMPVAQKYHLPLVTGV 122 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183 ++ +LT++G R A D A I+ T++ + +A + +G G + Q Sbjct: 123 SSEADLTEKGNPWFFRAAETDQLLAHAFAPTIIRTLQLKSVAYVGVNDDWGRGSVQEFQQ 182 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 L+A V D G DF L+ +L+ D V+ + +++Q + +GL Sbjct: 183 SLQAGGVKTVSTDYFDHGATDFYTLLTKLRASGADAVFVAAETQDGSILVKQIKELGLHI 242 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWI 302 + G A ++AG AAEG+ +P P N V + + K G Y Sbjct: 243 KVFGVGSWATADFIDLAGPAAEGVYAAVPYASTLTTPENTAFVASYQTAYKAAPGKYSAA 302 Query: 303 TYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 Y AV+ +A A+ R GS + + L G + KG GF + Q H Sbjct: 303 GYNAVEIVAKAIARAGSTDADKIRAALAQTDFAAPNGRYRFTAKGQAYGFSVVLVQIH 360 >UniRef50_Q2YLG0 Leu/Ile/Val-binding protein homolog 2 n=42 Tax=Brucellaceae RepID=LIVB2_BRUA2 Length = 371 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 140/370 (37%), Positives = 206/370 (55%), Gaps = 5/370 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK++ + +A+ T+ AD I V V ++G A +G+ G A+ + NAKG Sbjct: 1 MKKSLFCGVCLCALVAMGGTSFAD-IMVGVGAPLTGSQAAFGEQIKRGVEAAVAEANAKG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G+++ V DDA DPKQ ++VANK V DG+K+VIGH S + P SDIY + G+LMI Sbjct: 60 GMNGEQITLVYGDDAADPKQGISVANKFVGDGVKFVIGHFNSGVSIPTSDIYAENGVLMI 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 +PG TNP T+R + RT D QG KY+ + K ++AI+HDK YG+GLA Sbjct: 120 APGTTNPTFTERELWNTFRTCRRDDKQGIVPGKYMADNYKDGKVAILHDKTPYGQGLADE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + L ++G+ GEKDFSALIA+LK+ ++ VY+GG +PE G ++RQ G Sbjct: 180 TKKKLNELGTKETLYEGVNVGEKDFSALIAKLKQAGVNVVYWGGLHPEAGLIIRQMADQG 239 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LK QF+ +G+ + L++IAG A EG L T +P N +V + Y Sbjct: 240 LKAQFISGDGIVSNELASIAGPAVEGTLNTFGPDPRNNPDNAELVKKFRDA-GFEPEAYT 298 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQW 359 + YA VQSL A GS++P+ + +K G TV+G +++D KGD + +F+W Sbjct: 299 FYAYAGVQSLVNAANAAGSNDPMEVATAMKEKGPFKTVLGDISFDAKGDPSLSPYVMFEW 358 Query: 360 HA--DGSSTA 367 DG Sbjct: 359 RKGEDGKYNY 368 >UniRef50_D1C9L8 Extracellular ligand-binding receptor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9L8_SPHTD Length = 375 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 105/366 (28%), Positives = 177/366 (48%), Gaps = 9/366 (2%) Query: 4 NAKTIIAGMIALAISH--TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 +A +IA ++A S A +D+IK+AVVG M+G AQ+G+ GA+ A + INA G Sbjct: 10 SALFVIALLVAGCGSPGDAADSDEIKIAVVGPMTGDAAQYGEDFTRGAQLAAEQINAADG 69 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMI 120 + G ++ V +DD D +A +VA KI D I +GH SS+ A IY+ + ++ Sbjct: 70 VDGKQITIVTFDDRNDTTEAASVAQKIATDSSIVASMGHFTSSTVYAAMPIYKSNQLPLV 129 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 A++P +T++G + + R + ++ A I+ + ++IAI + +G+ Sbjct: 130 VISASDPGITEQGNEWVFRVSPTNNLGAEAMADLIVNELGLKKIAIFYLNTDFGKTEREF 189 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 ++A +V + KDFS+ I +LK D VY YY + ++RQA+ G Sbjct: 190 FTARVQANGGEIVLDEPYQPDAKDFSSSIIKLKNAGADAVYLSSYYNDAVLLIRQAKDAG 249 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 ++ ++ V + + I G+A EG++ R Q + + +A +A D P+V Sbjct: 250 VEIRWFTSAAVLSPQFTEIGGEAVEGVIT---NRVSQGDSWDAVAEAYRAKYNDDPSPFV 306 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQW 359 Y+AVQ++A A G A+ L G T +GPL +DE F + Sbjct: 307 IYAYSAVQAVAEAARSEG-TSREAIRDGLAKIQGLETALGPLTFDENRQAVYESFDYLEV 365 Query: 360 HADGSS 365 DG Sbjct: 366 R-DGQF 370 >UniRef50_B6WPS4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPS4_9DELT Length = 355 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 184/346 (53%), Gaps = 2/346 (0%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 AD IK+ V GA SG +A +G N A+ I++ NAKGG+ G K+ V DD C P+ A Sbjct: 2 AADTIKIGVQGAHSGDLASYGVPSLNAAKIVIEEANAKGGVLGKKIELVAQDDQCKPELA 61 Query: 82 VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY-QHIMRT 140 A K+++D + ++G +CS +T + +YE I+ ISP AT P LT G +RT Sbjct: 62 TNAATKLISDKVVAIMGPICSGATNASLPMYESANIISISPTATTPALTLEGKHPLFLRT 121 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 D++Q + YI+E +K +++A +HD +YG+G A+ + L+ A V F+ +T Sbjct: 122 VANDNAQAQLTSSYIIEVLKAKKVAYLHDNGEYGKGFAQQNRGILEKAGVETVLFEAVTP 181 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 DFSA++ +L++ D + +GGY ++++Q R +KT +GP+GV + + + Sbjct: 182 DAVDFSAVVRKLRRAKADVLVFGGYQNTASKLVQQMRRDRVKTPLIGPDGVKDETFLKMT 241 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 G +EG++ + PK + +A G + YAA Q+L A+E GS Sbjct: 242 GKDSEGVMASYPKDTSTLAMYKHAREAHVKQFGSEPGFGYYNAYAATQALIKAIEVAGST 301 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 E ++ LK+ +T +G +++++ GD G V+ DG Sbjct: 302 ETDKIMAALKSTEVDTPLGKMSFNKAGDATGLGLSVY-VVKDGKFV 346 >UniRef50_B8J3K0 Extracellular ligand-binding receptor n=10 Tax=Deltaproteobacteria RepID=B8J3K0_DESDA Length = 405 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 88/386 (22%), Positives = 166/386 (43%), Gaps = 20/386 (5%) Query: 2 KRNAKTIIAGMIALAISHTA--MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 + K + A ++L + A IK+ ++G I + G+ A ++INAK Sbjct: 17 MKLFKLVTACALSLFVGQAALAAEKPIKIGFPIPLTGEIPKVGEGSKFAAEMLKEEINAK 76 Query: 60 GGIK-G---DKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYED 114 GG+K G L + D+ P+ AV V K++ D + ++G S PA + D Sbjct: 77 GGLKVGDKYYPLEFIYEDNESKPESAVNVTLKLIARDKVHAIVGPQSSRQAVPAGGVAND 136 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQY 173 E + +I+P +TNP+ T G + R A LD Q P A + + ++ A++ + Y Sbjct: 137 EEVPLITPWSTNPDAT-NGRPWVFRGAFLDPFQAPVAVDFATKQFNAKKAAVLFEVSNDY 195 Query: 174 GEGLARSVQDGLKAANAN--VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 +GLA + ++ + + VV + ++DFSA + ++ DF++ Y Sbjct: 196 SKGLADNFKEAFEKTHGKGSVVAMESHGPKDQDFSAQLTKIIAAKPDFIFVPENYSFAAL 255 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKA 290 ++ QAR +G K FMG + G+A L N+ G G + + + +D KA Sbjct: 256 IVPQARDLGYKGPFMGSDAWGSAELFNLCGKDCVGQYFSTHYTAEGATGKTREFIDKYKA 315 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPLA------LVKDLKAN-GANTVIGPLNW 343 +T+ ++ + A++ G +P + ++ A + + G + + Sbjct: 316 KYGYVPDDVAALTWDSINIVLQAIQNAGKVDPDLKKQRKIIRDNMAAIENFDGITGSMKF 375 Query: 344 DEKGDLKGFDFGVFQWHADGSSTAAK 369 D+ GD + + GS + Sbjct: 376 DDNGDPIKCAV-IVKVTDSGSFAFVE 400 >UniRef50_C4FV28 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FV28_9FIRM Length = 384 Score = 340 bits (873), Expect = 6e-92, Method: Composition-based stats. Identities = 92/365 (25%), Positives = 162/365 (44%), Gaps = 10/365 (2%) Query: 2 KRNAKTIIAGMIALA-ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA-K 59 K+ + AG++ + ++ + D +KV +SG A +G G + A+K N Sbjct: 4 KKLGTALFAGLLLASPLATVSAQDTVKVGGNFELSGAAAAYGTPMAYGLKLAVKQYNEEN 63 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GG+ G K+ D+ D +A A A K+V G+ ++G + + D Sbjct: 64 GGVNGKKVEAQVEDNKSDKTEAAAAATKLVAAGVAGIVGPATTGDALAEIPVANDGKTPA 123 Query: 120 ISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYG 174 I P AT +T + Y +I R DS QG AA Y+ +T +++ ++ D+ Y Sbjct: 124 IFPAATGNGITLDSAGKVYDYIYRVCFEDSFQGVAAANYLADTQGYKKVVLLVDQANDYS 183 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 +GLA S +A +V + + DF ++ + ++ D +Y GYY E G +++ Sbjct: 184 QGLADSFTKQFEAKGGTIVAKESYQTNDTDFLTVLTNISTQDFDALYVPGYYTEAGLIIK 243 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKRY-DQDPANQGIVDALKADK 292 QAR +G+ +G +G N +L +AG D + T DPA + V+A + + Sbjct: 244 QARELGIDKPIVGGDGFANDTLVELAGKDNLNNVFYTSHYSDKSDDPAVKKFVEAYEKEY 303 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKG 351 + ++Y A L A++ GS +P + K L V G ++DEK + Sbjct: 304 GKKPDTFAALSYDATNVLLQAIKDAGSTDPQEVNKALAKIKDFKGVTGTFSFDEKHNPVK 363 Query: 352 FDFGV 356 + Sbjct: 364 TAVML 368 >UniRef50_B5WAG3 Extracellular ligand-binding receptor n=2 Tax=Burkholderia RepID=B5WAG3_9BURK Length = 400 Score = 339 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 115/360 (31%), Positives = 174/360 (48%), Gaps = 1/360 (0%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 A + + S + IK+ V +SG A G NGA+ A INA GG+ Sbjct: 23 MAAAVTLLVGMAPGSALSQGATIKIGVPVPLSGSSANAGTDIVNGAKLAAARINAAGGVL 82 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 G ++ V DDACD + AV A K+V+ G+ V G CS++ P S + GI + Sbjct: 83 GKQIELVPEDDACDAQTAVQAAQKLVDAGVVAVAGGYCSAAALPESTTFHRAGIPYVLDA 142 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183 +TNP+LT+ GY ++ RT G D QGP AA ++ + + + +A+I D Y +GLA++ Sbjct: 143 STNPQLTEMGYDNVFRTIGRDDQQGPFAASFMKDVLHAKHVAVIDDNTTYSKGLAQNTVQ 202 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 LK +VV+ + IT G+ D+S + R+ D +YY GY+ E G ++++AR +GLK Sbjct: 203 ALKKDGVDVVYANSITPGQMDYSPTLTRVSSLKPDVIYYTGYFSEAGLIVKEARQLGLKM 262 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWIT 303 MG +G + +L AG AA+GM++T VD GPY Sbjct: 263 TLMGGDGTNDPTLMKTAGAAADGMIITTAPLAQFLSGAHAYVDDYTKAYGQGPGPYSVYE 322 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 Y AV A A+ S +P A+ L G +++ KGD + H D Sbjct: 323 YDAVGVTAKAIADAKSAQPAAITAALHKISNYPGATGTIDFTPKGDRSKAVYITIIVHND 382 >UniRef50_Q0ATW1 Branched chain amino acid ABC transporter (Substrate-binding protein) n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0ATW1_SYNWW Length = 392 Score = 339 bits (871), Expect = 9e-92, Method: Composition-based stats. Identities = 89/388 (22%), Positives = 165/388 (42%), Gaps = 25/388 (6%) Query: 2 KRNAKTIIAGMIALAISHT--------------AMADDIKVAVVGAMSGPIAQWGDMEFN 47 KR ++ ++ A + I V + +SG +A +G N Sbjct: 5 KRLVFLVLMLFTLGVLAGCGSKPEGGDKAGGDKAAVETIPVGINVELSGDLASYGSNSRN 64 Query: 48 GARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQP 107 G AI++IN GG+ G +L +E D P +A+ + + + I +G L S + Sbjct: 65 GMVLAIEEINQAGGVLGKELKYIERDCQSKPDEAMNNSAALAGEKIIAQLGPLTSGAVAG 124 Query: 108 ASDIYEDEGILMISPGATNPEL-----TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQ 162 ++ + I +I+P AT + T + +I R LD+ Q A++ L +K + Sbjct: 125 STPVMMQNKIPLIAPAATAENVTVEEKTGKTLDYIFRVCYLDADQARRMAEFALNDLKVK 184 Query: 163 RIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVY 221 I Y +GLA+ ++ A +V +G G+KDF A + +L+ +N +F+Y Sbjct: 185 NAVIFGSTSDDYAKGLAKYFEEAFVAGGGKIVAKEGYVNGDKDFKATLTKLRSKNPEFIY 244 Query: 222 YGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKR-YDQDP 279 GYY E+ +++QAR + +K G +G + + +AG +A D P Sbjct: 245 VPGYYTEVALLIKQARDLDIKVPIGGGDGWDSPDMVKVAGAEALNNTYFANHYSVEDPSP 304 Query: 280 ANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVI 338 V A +A K + + Y + + LA A++ G + + + L + Sbjct: 305 VISSFVKAYEAKYKKLPDSFAALGYDSAKILAQAIKDAGEADSAKVAQALAKIKDFPGIT 364 Query: 339 GPLNWDEKGDLKGFDFGVFQWHADGSST 366 G ++ +EK + + V ++ DG Sbjct: 365 GTMSINEKHNPVK-EIVVIEYK-DGKLV 390 >UniRef50_Q11D26 Extracellular ligand-binding receptor n=3 Tax=Alphaproteobacteria RepID=Q11D26_MESSB Length = 366 Score = 338 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 144/370 (38%), Positives = 211/370 (57%), Gaps = 6/370 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ + + L ++ +A AD I +A VG M+G A +G GA QA+ DINA G Sbjct: 1 MKK--ILLAGAALGLVMTGSAWAD-ITIATVGPMTGQYASFGAQMRAGAEQAVADINAAG 57 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G+ L DDACDPKQAVAVAN++ G+ +V GH CS S+ PAS +Y DE I+MI Sbjct: 58 GVNGEMLRLEVGDDACDPKQAVAVANQLAGSGVVFVAGHFCSGSSIPASQVYADEEIVMI 117 Query: 121 SPGATNPELT-QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 SP +TNP T +R I R G D QG A K++ E ++IA IHDK YG+GLA Sbjct: 118 SPASTNPTFTDERPGPGIYRVCGRDDQQGNVAGKFLAEKFADKKIAFIHDKTAYGKGLAD 177 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + A + ++ TAGEKD++AL+++LK+E ID +Y GGYY E G + RQ R Sbjct: 178 ATMAVYEEAGGSPALYEAYTAGEKDYTALVSKLKQEGIDILYVGGYYTEAGLIARQMREQ 237 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPY 299 G++T + + + I GDA EG L+T ++P + +VDA+ A + Y Sbjct: 238 GMQTILVSGDALVADEYWAITGDAGEGTLMTFSPDPRKNPEAKPVVDAMLAA-GKTTEGY 296 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 TYAA+Q+ A++ GS + + + L NTV+G L +D+KGD+ + ++W Sbjct: 297 SLYTYAAIQAWVDAVKNAGSTDFEPVTEALNEGKFNTVLGTLEFDDKGDVTLPGYVFYEW 356 Query: 360 HADGSSTAAK 369 DG+ + Sbjct: 357 K-DGTYDYLE 365 >UniRef50_C0GH32 Extracellular ligand-binding receptor n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH32_9FIRM Length = 387 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 158/348 (45%), Gaps = 7/348 (2%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A++IK+ VG ++G A +G G AI + N GGI G ++ + D D + Sbjct: 40 GDAEEIKIGTVGPLTGGAASYGVSVRRGVEIAINEANEAGGINGAQIRLIPEDTGGDATE 99 Query: 81 AVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 A +K++ D + +IG + SS T + D G+ MISP +T + Q G ++I R Sbjct: 100 AANATSKLIEQDNVSVIIGAVLSSETFAGAPFANDAGVPMISPASTATGIPQEG-EYIFR 158 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 D Q A+Y + + R A++ YG L + + VV T Sbjct: 159 NTLADEVQAAQLAEYASDELGVSRFAVMFTNNDYGVALRDAFVATAEGLG-EVVEIQSFT 217 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+ DFSA + R+ + N + ++ GGYY E ++ +QA+ GL Q +G +G + L N+ Sbjct: 218 DGDDDFSAALTRIAQGNPEALFIGGYYEEAARIAQQAQEQGLDVQILGADGFYSPVLVNL 277 Query: 260 AGDAAEGMLVT-MPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG 318 GDA EG + T D A V + + + + Y A + + A+E G Sbjct: 278 GGDAVEGAIFTAAFYDGDTADAVVNFVSKFQEEFGETPDMFAAQAYDAARIVLQAIETAG 337 Query: 319 SDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 S + A+ L A + G ++D +GD+ + + Q DGS Sbjct: 338 SGDSAAIRDALAAIQDFPGITGVTSFDGEGDVIK-EVLILQV-EDGSF 383 >UniRef50_A0B322 Extracellular ligand-binding receptor n=3 Tax=Burkholderia cenocepacia RepID=A0B322_BURCH Length = 599 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 5/353 (1%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKGDKLV--GVEYDDACDP 78 AD + V GA++G A +G+ G R AI +INA + G + DD DP Sbjct: 244 GADTVVVGFAGALTGAQAHFGEDSARGIRLAIDEINAGHPSVAGHPVTFALDAQDDQADP 303 Query: 79 KQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 K A VA + V+ + VIGH S ++ + +Y I ++P ATNPE T+ GY+ Sbjct: 304 KVATTVAQRFVDTHVSAVIGHQNSGTSIAVARLYATANIAELTPSATNPEFTRLGYRTTF 363 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R D G A+Y +E + +RI ++ D+ YG+G+A GL A+ A VV + Sbjct: 364 RLLANDDFLGQAVARYAVEQLHARRIGVVDDRTAYGQGIADVFVGGLGASGATVVAREYT 423 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 T DF A + LK + D +++GG + G ML+Q R + + +G +G+ + Sbjct: 424 TDKAFDFGAPLTLLKGKAPDAIFFGGMDTQGGPMLKQMRKLRIAAPLLGGDGLCTHEILK 483 Query: 259 IAGDAAEGMLVTMPK--RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 +AGDA +G LV + P P Y Y A+ ++ A+ Sbjct: 484 LAGDALDGNLVCADGGRSLAKMPGGPAFAARFTQKYGAPVQLYAPYAYDAMMAVYHAVML 543 Query: 317 TGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 S +P +V L V G + +D +G+L+ + + T ++ Sbjct: 544 AQSTDPAKIVDALHRVDFQGVTGRIAFDARGELRNPAATISTFKGGNKVTLSE 596 >UniRef50_C1TP01 Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP01_9BACT Length = 383 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 79/375 (21%), Positives = 147/375 (39%), Gaps = 13/375 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M++ +A + ++ AMA+ +K+ + A++G A +G E N A+ A+ +INAK Sbjct: 1 MRKLFVLCMAVALCCTMAAGAMAEETVKIGYLAALTGDWAAYGQTEKNTAQLAVDEINAK 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G K+ V YD + AV +++ D + ++G S + + + Sbjct: 61 GGIDGRKVELVVYDFRGRQEDAVNAVRRLLEEDKVSAIVGANASGINIATAALVNRAEVP 120 Query: 119 MISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQY 173 I +TNP +T + + R D QG A + + + + A+++D Y Sbjct: 121 QIGTVSTNPMVTVDRKGKVRPYSFRICFTDPYQGKLIAWFAAKELGKTKAAVLYDIASDY 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGIT-AGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 +GL + V + A + DF A + ++++ D + EM + Sbjct: 181 AQGLREFFIKSFEEYGGETVADEAFKGAQDVDFRAQLTKIREAGADVLVLPNMGKEMALI 240 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADK 292 ++QAR +G+ + IAG + E DP + +A Sbjct: 241 MKQARELGMDDLVFVGGDGYAEFMWEIAGKSMENSYWINHVSPS-DPNMAKFFEDYEAKY 299 Query: 293 KDPSGPY--VWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDL 349 D + + Y A+ L A++R S + + + + L + DE + Sbjct: 300 NDECKEFVNGILGYDAMYWLFDAIDRADSTDSVKIAQALADTKDLQLHHATITMDEFHNP 359 Query: 350 KGFDFGVFQWHADGS 364 D V DG Sbjct: 360 LNKDGIVL-IAKDGK 373 >UniRef50_Q8G3D4 Leu/Ile/Val-binding protein homolog 3 n=53 Tax=Rhizobiales RepID=LIVB3_BRUSU Length = 368 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 138/368 (37%), Positives = 207/368 (56%), Gaps = 5/368 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M + +A + + A AD I + V+ ++GP+A +GD GA A++ IN G Sbjct: 1 MNLKLLSSLAFAATIGFASAAYAD-ITIGVIAPLTGPVAAFGDQVKKGAETAVEVINKAG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GIKG+K+V DDA +PKQ V+ AN+IV DGIK+V+G + + P SD+ + G+LM+ Sbjct: 60 GIKGEKVVLKFADDAGEPKQGVSAANQIVGDGIKFVVGPVTTGVAVPVSDVLSENGVLMV 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 +P AT P+LT RG +++ RT G D Q A Y+L+ +K +++A+IHDK YG+GLA + Sbjct: 120 TPTATGPDLTARGLENVFRTCGRDDQQAEVMADYVLKNMKDKKVAVIHDKGAYGKGLADA 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + + V +D +T G+KDFSAL+ +LK + VY+GGY+ E G + RQ G Sbjct: 180 FKAAINKGGITEVHYDSVTPGDKDFSALVTKLKSAGAEVVYFGGYHAEGGLLSRQLHDAG 239 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 ++ +G EG+ N I G A+G L T K ++PA + + ALKA P+ + Sbjct: 240 MQALVLGGEGLSNTEYWAIGGTNAQGTLFTNAKDATKNPAAKDAIQALKAK-NIPAEAFT 298 Query: 301 WITYAAVQSLATALERTGSD-EPLALVKDLK-ANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 YAAV+ + +ER GS + A+ K L T IG L + E GDL F +F+ Sbjct: 299 MNAYAAVEVIKAGIERAGSTDDSAAVAKALHDGKPIETAIGTLTYSETGDLSSPSFDIFK 358 Query: 359 WHADGSST 366 W DG Sbjct: 359 W-DDGKIV 365 >UniRef50_B1I4I1 Extracellular ligand-binding receptor n=4 Tax=Clostridiales RepID=B1I4I1_DESAP Length = 386 Score = 336 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 92/370 (24%), Positives = 171/370 (46%), Gaps = 14/370 (3%) Query: 4 NAKTIIAGMIALAI-SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 + +IIAG + TA ++IK+ ++ ++G + +G+ N AI++ + + Sbjct: 16 FSLSIIAGCGGGGTPAPTAPVEEIKIGLIAPLTGDVKTFGESVKNAFELAIEE--SGHKV 73 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 + V DD +AV VA+K++ D + ++G + SS T P S++ + G+++IS Sbjct: 74 GDFNIKYVIADDRNVATEAVNVADKLITQDKVSAIVGSVTSSCTIPISEVAQAAGVVVIS 133 Query: 122 PGATNPELT---QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGL 177 P ATNP++T + +I R +D QG AA++ L+ + + A++ D+ Y GL Sbjct: 134 PTATNPKVTVDGGKRKDYIFRACFIDPFQGTVAARFALDELGAKTAAVLFDQGNDYTIGL 193 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 ++ A VV + + DFSA++ R+ + D ++ YY ++ + +QAR Sbjct: 194 KDYFKEAFVAGGGQVVAEEAYAKTDTDFSAVLTRIAQLKPDVLFLPDYYQKVSLIGKQAR 253 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPS 296 G+ F+G +G + + A +G T D P + VD A Sbjct: 254 DKGITATFLGGDGWDSPEIDWT---AMDGGYFTNHYSPEDPRPEVKEWVDKYTAKYGQTP 310 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFG 355 + Y A + L A+E+ GS +P A+ + + G V G +++DE G+ Sbjct: 311 DALATLAYDATKLLLAAIEKAGSKDPAAIRDAMASIEGFQAVSGSISFDENGNPIKSAV- 369 Query: 356 VFQWHADGSS 365 + Q Sbjct: 370 ILQIKDGAQK 379 >UniRef50_Q7NI31 Glr2353 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NI31_GLOVI Length = 367 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 112/353 (31%), Positives = 185/353 (52%), Gaps = 8/353 (2%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 +D + + V G +SGP G+ A++ +N KGG+KG ++ V DD P Sbjct: 19 CGSSDKVYIGVAGPLSGPQTVQGEYILKAVELAVEQVNVKGGVKGKQIEVVTGDDQAKPL 78 Query: 80 QAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 A +VA K+ + +G+ V+GH S + PAS IY ++MI+PG+TNP LT+ G +++ Sbjct: 79 DATSVARKLASTEGVMGVVGHFNSGCSIPASSIYNQGNLVMITPGSTNPALTENGLKNVY 138 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R G D QG + L +++ QR+AI+HDK YG+GLA ++ ++ A V FF+GI Sbjct: 139 RIVGRDDQQGAVDGDFALRSLQAQRVAILHDKTPYGQGLASFFRETVETGGAEVTFFEGI 198 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 T G++DF A++ R+K + D ++YGG + E G ++ QAR +G+K++F+ +G S + Sbjct: 199 TQGDRDFRAVLTRIKGIDPDTIFYGGVFVEAGLVVSQARELGIKSRFISGDGTKEQSFID 258 Query: 259 IAGDAAEGMLVTMPKRYDQDPANQGIVDALKADK-KDPSGPYVWITYAAVQSLATALERT 317 I G A + ++ P + N VDA + GP+ Y A + L A+E Sbjct: 259 IVGKNAGDIYISGPALVN----NAAFVDAYMDKYNNEEPGPFSPYAYDAARILIAAMESA 314 Query: 318 GSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 A+ +++ + G + +D KGD F +F DG + Sbjct: 315 PELTREAVAAEVRKLKNFAGLAGSITFDAKGDRDKAPFDIF-VIKDGEFVPYR 366 >UniRef50_A6TPW6 Extracellular ligand-binding receptor n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TPW6_ALKMQ Length = 402 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 86/354 (24%), Positives = 155/354 (43%), Gaps = 9/354 (2%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 ++ IK+ +G+++G A WG EFN + +++ N KGG G + + YD D +AV Sbjct: 46 SEVIKIGWMGSLTGDQAVWGTCEFNTVKMMVEEANRKGGWLGQTIEVIGYDTRGDAMEAV 105 Query: 83 AVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT----QRGYQHI 137 ++ D + VIG S S + E+ + I+ ATNP++T + Sbjct: 106 NAVRRLTSQDKVVAVIGPNASGQAIAISSVLEEMKVADIATVATNPKVTIDESGNVKPYN 165 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFD 196 R +D QG AA Y L+ + + AI++D Y +GL + +V + Sbjct: 166 FRVCFIDPYQGAVAAGYALDVLGLTKAAILYDVADDYSQGLTEFFEKHFVENGGTIVAKE 225 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 G G+ DF ++++K+ + V+ ++ E+ QAR +G+ +G +G + L Sbjct: 226 GFKFGDVDFRPQLSKIKQAEPEVVFMPYFFKEVALSANQARELGIDAVLLGGDGWPSDVL 285 Query: 257 SNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 +A +A EG +D DP Q A A P ++ Y A L +A+E+ Sbjct: 286 LEMAAEAVEGSYFVNHLDFD-DPDVQDFKAAYTAKYNLPVELNGYLAYDAFTVLESAVEK 344 Query: 317 TGSDEPLALVKDLKANGANTVIGPLNWD-EKGDLKGFDFGVFQWHADGSSTAAK 369 G + A+ L+ + G + E + +G D + + +G + Sbjct: 345 AGVADSEAIRDALETVSVKGITGQITISKETHNPEGKDAAIIKIQ-NGQYVFQQ 397 >UniRef50_D1B9T5 Extracellular ligand-binding receptor n=2 Tax=Synergistaceae RepID=D1B9T5_THEAS Length = 384 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 86/373 (23%), Positives = 156/373 (41%), Gaps = 11/373 (2%) Query: 2 KRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 K+ +A + +AMA +IK+ + A++G A +G E A+ A+++INAKGG Sbjct: 3 KKFGILAVAVALVALFVGSAMAGEIKIGYLAALTGDYAGYGQTELRAAQLAVEEINAKGG 62 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 + G+KLV V YD + AV ++++ D + +IG S + + I + I Sbjct: 63 VLGNKLVLVPYDWRTRAEDAVNAVRRMIDQDKVVAIIGANASGANIATAPIVNKAKVPQI 122 Query: 121 SPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGE 175 +TNP +T + + R D QG A + ++ A+++D Y + Sbjct: 123 GTVSTNPLVTVDEKGKVRPYSFRICFTDPYQGKVLANLAAVKLGKKKGAMLYDVASDYSQ 182 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GL + +V + + DF A + ++ D ++ G +M +++Q Sbjct: 183 GLREFCIKEFEKLGGKIVADEAYKGTDTDFRAQLTNVRNSGADVLFLPGMGKDMALIIKQ 242 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 AR +G+K + + IAG+A G + DP Q A K KD Sbjct: 243 ARELGMKDLVIMGGDGYADFMYEIAGNALVGTYWVNHTSLE-DPGMQPFFKAYKEKYKDE 301 Query: 296 SGPY--VWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEK-GDLKG 351 + + Y +V LA A++R G + A+ + L+ L+ + K + Sbjct: 302 CKEFVNGVLAYDSVYWLADAIKRAGKVDGTAIAQALEKTKDLKLHHAVLSINPKDHNPLN 361 Query: 352 FDFGVFQWHADGS 364 + + DG Sbjct: 362 KTAVILRVEKDGK 374 >UniRef50_C4XSP4 ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSP4_DESMR Length = 388 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 104/384 (27%), Positives = 172/384 (44%), Gaps = 19/384 (4%) Query: 2 KRNAKTIIAGMIALAIS----HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 ++ + +A + L + AD IK+AV ++G A +G+ G +++IN Sbjct: 4 RKTTRAALACALGLTLGLAAAPAHAADTIKIAVPTPLTGSAAGYGENVKAGVDLKLEEIN 63 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEG 116 A GGI G KL V +D+ C+P++A V++ IVND I ++GHLCSS+ Y EG Sbjct: 64 AAGGINGKKLEAVYFDEQCEPREAATVSSSIVNDEAIVAIVGHLCSSAHLAGLPAYVREG 123 Query: 117 ILMISPGATNPELT-----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ 171 I I+P ATN ++ ++G R D QG A Y + + +++A+ ++ Sbjct: 124 IAAITPTATNTTISTKSKDEKGKAWSFRNVYRDDFQGKFLADYSAKVLGLKKVAVFYENN 183 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 YG GL + KA VV + G++D++ + +LK + ++ GYYPE Sbjct: 184 DYGIGLKDAFIKEAKALGLTVVGEEAYKKGDQDYTPQLTKLKGAAPEAMFIAGYYPEGAL 243 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPA-NQGIVDALKA 290 + QA+ +GL MG +G N + G +A+ +T P + A + +DA KA Sbjct: 244 IADQAKKIGLNVAKMGADGFDNLDYVKLGGASADNTYLTAPFLVETAGADAKKFIDAFKA 303 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-----ANTVIGPLNWDE 345 K Y A +A A+ + G + + L V G +D Sbjct: 304 KYKRDVDWMSANAYDAAGIMAEAIAKVG-ADRTKIRDYLAGLDSPEKGYKGVTGVNYFDG 362 Query: 346 KGDLKGFDFGVFQWHADGSSTAAK 369 GD + + DG A+ Sbjct: 363 NGDCLKPAYV--KVVKDGKFVPAE 384 >UniRef50_D2L0G3 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0G3_9DELT Length = 389 Score = 333 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 98/381 (25%), Positives = 161/381 (42%), Gaps = 16/381 (4%) Query: 1 MKRNAKTIIAGM-IALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M+ + G+ + L+ + IK+AV +G A +G+ G I +INA Sbjct: 7 MRMSLFGAALGLTLGLSATGARADGTIKIAVPSPYTGSAAGYGENVKAGVAMKIDEINAA 66 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G KL V D+ C+P++A V++ I ND I ++GHLCSS+ A Y EG+ Sbjct: 67 GGVGGKKLEAVYLDEQCEPREAATVSSSIANDPDIVGIVGHLCSSAQLAALPTYVREGVP 126 Query: 119 MISPGATNPELTQRGYQ-----HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 ISP AT+ ++ + R D QG A Y+ + + +++AI ++ Y Sbjct: 127 AISPTATSVAISDKNKDEKGKVWAFRNVYRDDFQGKFLADYVDKVLGLKKVAIFYENNDY 186 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G GL + K +V + G++D++ + +LK ++ GYYPE + Sbjct: 187 GIGLKDAFVKEGKKLGLTIVGEEAYKKGDQDYTPQLTKLKSAAPQAMFIAGYYPEGALIA 246 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPA-NQGIVDALKADK 292 QA+ +GL G +G NA + G A + +T P + A + ++ KA Sbjct: 247 DQAKKIGLSVPKFGADGFDNADYMKLGGAAVDDTYLTAPFLAETAGADAKKFIEDFKAKY 306 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-----ANTVIGPLNWDEKG 347 K Y A LA A+ + G + + L V G +D G Sbjct: 307 KREVDWMSANAYDATGMLAAAIAKAGP-DRAKIRDYLAGMDSPEKGYKGVTGVNYFDANG 365 Query: 348 DLKGFDFGVFQWHADGSSTAA 368 D + + G A Sbjct: 366 DCQKPANV--KMVKGGVFVPA 384 >UniRef50_D1B6L8 Extracellular ligand-binding receptor n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6L8_THEAS Length = 386 Score = 333 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 82/370 (22%), Positives = 160/370 (43%), Gaps = 11/370 (2%) Query: 1 MKRNAKTIIAGMIALAI-SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M+ A A ++ +A+ S A++IK+ +++G + WG E +K INA+ Sbjct: 1 MRFFAWLGGAMLLVMALVSGAPAAEEIKIGHSVSLTGGASMWGQSEKLALDLLVKRINAQ 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GG+ G K+ + YD+ DP ++V VA ++++D + +IG S + + + E I M Sbjct: 61 GGVLGRKIRLISYDNRNDPVESVNVARRLIDDRVVAIIGPAQSGNAIATAPVVERARIPM 120 Query: 120 ISPGATNPEL-----TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQY 173 + ATNP + T + + R +D QG AA++ +K + AI++D Y Sbjct: 121 VVTTATNPYVTIDKRTGKTRAFVFRPCFIDPFQGTVAARFAYRDLKARTAAILYDVGSDY 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+ LAR ++ VV + E D+ A + +++ D ++ E Sbjct: 181 GQWLARYFEEAFAKEGGKVVAKEAFRTDELDYRAQMGKIRSVKPDVIFIPTSQKEAAMAA 240 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKK 293 +QAR +G+++ +G + G+ + ++ G+A G DP +G V + Sbjct: 241 KQARDMGIRSTLLGTDNWGSPDIIDLGGNAVHGSYFVNLTDLS-DPDIKGFVAEYRRAYG 299 Query: 294 DPSG-PYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEK-GDLK 350 P + A+ + A++ + + + + ++ G L D K D Sbjct: 300 ADPVLPNPVMAQDALLLIVNAIKVSKGTDGERMARAMENTRNLKVTSGTLTIDPKTHDPL 359 Query: 351 GFDFGVFQWH 360 + + Sbjct: 360 DKPAVIQRVD 369 >UniRef50_Q141F0 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q141F0_BURXL Length = 383 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 169/371 (45%), Gaps = 5/371 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 +K A + A + A +K+ ++G A +G NG R AI++ NA+ Sbjct: 7 LKPLALFVGAIFAVAPPATFADDLPVKIGFAAPLTGANAGYGKDLENGVRLAIEEANAQK 66 Query: 61 GIKGDKL---VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGI 117 GDK+ V DD DP+ V A K+V+ G+ V+GH S +T PAS IYE GI Sbjct: 67 IKIGDKVAQFQIVSEDDQADPRIGVQAAQKLVDSGVSAVVGHFNSGTTIPASQIYEQAGI 126 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 +I P ATNP +T RG+ + D A Y ++ K +RIAII D+ +G+G Sbjct: 127 PVIDPAATNPVITGRGFANTFMVISTDGQNAGNAGVYAVQVTKAKRIAIIDDRTAFGQGE 186 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 A + +KA +++ + DFS I +LK N D +++GG + ++ + Sbjct: 187 ADEFEKAVKAHGGSIIAREYTDNKAVDFSTQITKLKSANADLIFFGGLDTQAAGFAKRMK 246 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPS 296 +G+ Q +G GV + +AGD++EG++ R Q P + K Sbjct: 247 QLGMNAQLVGGGGVMDQDFIKLAGDSSEGVMAWEYGRPLAQLPGGKDFSAKFKKRFGVDI 306 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGV 356 Y Y + A+++ S P LKA + V G +++D G LK + Sbjct: 307 LSYAPFGYDGAWAAIKAMQQAKSASPNVYRPVLKAIDFDGVTGKISFDSTGALKSGASTL 366 Query: 357 FQWHADGSSTA 367 +Q + G+ Sbjct: 367 YQVKS-GAWVP 376 >UniRef50_D0LYK9 Extracellular ligand-binding receptor n=4 Tax=Proteobacteria RepID=D0LYK9_HALO1 Length = 417 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 138/352 (39%), Positives = 209/352 (59%), Gaps = 2/352 (0%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDA 75 + + T + I +AV G M+G A +G GA+QA+ D+NAKGG+ G +L DDA Sbjct: 39 SATATDSGEPIVIAVAGPMTGQYASFGQQMAAGAKQAVADLNAKGGVLGRQLQLEVGDDA 98 Query: 76 CDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ 135 CDPKQAVAVAN++V G +V GH CS S+ PA+ +Y++EGI+ ISPG+T+P+LT+ G + Sbjct: 99 CDPKQAVAVANQMVQQGAVFVAGHWCSGSSIPANQVYDEEGIVSISPGSTSPKLTEEGGE 158 Query: 136 HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 + R G D QG AAK+++E + IA++HDK YG+GLA + L+A + Sbjct: 159 MVFRVCGRDDQQGEVAAKFLMEQFPGKNIAVLHDKTAYGKGLADETRKNLQAGGLEPTLY 218 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 + TAGEKD++AL+++LK+ ID VY GGY+ E G +LRQ R G+++ M + + Sbjct: 219 EAYTAGEKDYTALVSKLKQNEIDVVYIGGYHTEAGLILRQMREQGMESVLMSGDALVTQE 278 Query: 256 LSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 +I GDA G L+T ++ +V+ + K YV TY A+Q+ A A E Sbjct: 279 YWSITGDAGAGTLMTFSPDPRKNENAAAVVEVFREQ-KIEPEGYVLYTYGAIQAWAAAAE 337 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 G + A+V+ L A TV+G + +D+KGD+ + V++W DG+ Sbjct: 338 AAGKVDADAVVEKLHAMEFETVLGSIGFDDKGDVTAPGYVVYEWK-DGAYAY 388 >UniRef50_Q47JF2 Extracellular ligand-binding receptor n=142 Tax=Betaproteobacteria RepID=Q47JF2_DECAR Length = 460 Score = 333 bits (854), Expect = 9e-90, Method: Composition-based stats. Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 24/386 (6%) Query: 6 KTIIAGMIALAISHTAMAD------------------DIKVAVVGAMSGPIAQWGDMEFN 47 +++A +A A + +A +K+ V M+GP A G N Sbjct: 5 LSVVALSVAAAFALSACGQKEEPKAAAPAAPAGKPEVVVKLGHVAPMTGPQAHLGKDNEN 64 Query: 48 GARQAIKDINAKGG-IKGDKLV--GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSS 104 GA AI+++NAKG I G K+ + DDA DPKQ VA K+V+ + VIGHL S + Sbjct: 65 GAALAIEELNAKGLEIGGAKVKFQLLAEDDAADPKQGAIVAQKLVDAKVNGVIGHLNSGT 124 Query: 105 TQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRI 164 T PAS +Y D GI IS ATNP+ TQ+G++ R D QG ++ + + + Sbjct: 125 TIPASKLYSDAGIPQISGSATNPKYTQQGFKTAFRVMANDVQQGRALGEFAAKQ-GVKTV 183 Query: 165 AIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGG 224 A++ D+ YG+GLA + +A+ VV + DF A++ ++K + V+YGG Sbjct: 184 AVVDDRTAYGQGLADEFKKAAEASGLKVVATEYTNDKATDFKAILTKIKSTKAELVFYGG 243 Query: 225 YYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQG 283 + G M +Q + +G+K +F+G +GV + G+A EG ++P + ++ Sbjct: 244 MDAQGGPMAKQMKELGIKAKFLGGDGVCTPEFMKLGGEATEGNFCSLPGQPLEKLAKGPE 303 Query: 284 IVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 + Y Y AV +A +++R S +P+ + + + V + + Sbjct: 304 FREKFTKKFNAEIQLYAPYVYDAVMVMADSMKRADSVDPVKFLPAIGQTKYDGVTALIEF 363 Query: 344 DEKGDLKGFDFGVFQWHADGSSTAAK 369 D +GDLKG ++Q+ G + Sbjct: 364 DPQGDLKGGAISIYQYK-GGKLEYVE 388 >UniRef50_Q92ZZ6 ABC transporter, periplasmic solute-binding protein n=6 Tax=Rhizobiaceae RepID=Q92ZZ6_RHIME Length = 363 Score = 333 bits (854), Expect = 9e-90, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 182/350 (52%), Gaps = 2/350 (0%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 + ++ + V G MSG +A G GA A+ +INA GG+ G ++ + DD CDP+ Sbjct: 16 SQSEAEVLIGVAGPMSGKLAWTGTQLRRGAEMAVANINAAGGVLGQQVRLIVADDFCDPR 75 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 QA+A A K+V DG +VIGH CS ++ PAS IY G+L ISP +TNP LT++G+ ++ R Sbjct: 76 QALAAAEKLVADGAVFVIGHYCSGASIPASKIYAAAGVLQISPSSTNPMLTEQGHANVFR 135 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 D +QG A Y+ + +IAI+HD YG+GLA + L + T Sbjct: 136 VCSRDDAQGHKAGNYLADHWGDSKIAILHDNTTYGKGLADETKKQLNMRGVTEAVYQSYT 195 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+ D+S +A L+ +I +Y GGY+ E M+R AR Q + + + I Sbjct: 196 PGKDDYSVEVAALQTAHIAVLYLGGYHTEAALMVRAARDRAYPVQLISGDDTATEAFGLI 255 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 AG AAEG L T ++ +V+ +A+ + +Y A + A A+ + S Sbjct: 256 AGPAAEGTLFTFVADPRRNAEAAEVVERFRAE-NFEPDSWTLHSYGAAEIWAQAVTKANS 314 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + A++ L+ + +TV+G +++D+KGDL + + W + G + Sbjct: 315 LDLQAVIAALREDQFDTVLGRIDFDKKGDLTVQSWVWYVWKS-GEYVPVE 363 >UniRef50_C6BVT9 Extracellular ligand-binding receptor n=3 Tax=Deltaproteobacteria RepID=C6BVT9_DESAD Length = 377 Score = 331 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 111/369 (30%), Positives = 184/369 (49%), Gaps = 6/369 (1%) Query: 1 MKR-NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MKR ++ I + + A +KV +G ++GP A G+ NG A++ + A Sbjct: 1 MKRSMMTALLVAAILMLSAGMVFAKTLKVGTMGPLTGPYAADGNDIKNGVLTAVEVVKAN 60 Query: 60 GGIKG-DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G D++V + D AC+P+QAVA ANK++N+ V+G CSS+T PAS++ ++E I+ Sbjct: 61 GGIPGFDEIVVLPQDTACEPRQAVATANKLINEEANGVVGAYCSSATLPASEVLDEESIV 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 MI+P +TN ++T RG ++ R G D QG A K++ E + + + I+ DK Y +GLA Sbjct: 121 MITPASTNEKVTSRGLPYMFRMCGRDDDQGAIALKFMQEKLGAKSVYIVDDKTAYSQGLA 180 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGG-YYPEMGQMLRQAR 237 V+ AA V+ + + G+KDFSA++ ++K N D Y ML QA+ Sbjct: 181 DGVEKMCNAAGIKVLGHEHVNQGDKDFSAILTKVKNTNPDVFYMSMQNSATGALMLIQAK 240 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSG 297 +G+K + + V + L IA DAAE + +T + PA + + G Sbjct: 241 RMGIKAARLAQDAVYHPQLIEIAKDAAEDVYLTFGYIDSEAPAYKEFYAKYQPKHG-EPG 299 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 Y Y + + A+ GS +P + +L + + + GD G ++ + Sbjct: 300 AYSGYAYDSAMAYFKAVTAAGSTDPDKVKAELMKLDYDGATKHIKFKPNGD-SGSNYIIR 358 Query: 358 QWHADGSST 366 + G Sbjct: 359 KV-DGGKFI 366 >UniRef50_C0CMD4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CMD4_9FIRM Length = 387 Score = 331 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 90/372 (24%), Positives = 169/372 (45%), Gaps = 23/372 (6%) Query: 1 MKRNAKTIIAGMIALAI----------------SHTAMADDIKVAVVGAMSGPIAQWGDM 44 +K+ ++ + +++ + +D I + M+G +A G+M Sbjct: 3 LKKMLSVLLVSAVLVSMMACGGETESSSDGGEKASAGGSDTITIGASLPMTGSVALNGEM 62 Query: 45 EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKI-VNDGIKYVIGHLCSS 103 G + A+ + N GGI G ++V DD +P QA +VAN + ++ I +IG L SS Sbjct: 63 ILEGIQMAVDECNEAGGIDGKEVVIDAQDDQAEPNQAASVANMMSADEKIVAIIGSLKSS 122 Query: 104 STQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR 163 T A+ IYE+ G++ +SP +++PE+T G ++I R D T AK + + Sbjct: 123 CTLAAAPIYEEAGVVALSPDSSSPEVTNAG-EYIFRIKNSDVVLAQTMAKGAISD-GHTK 180 Query: 164 IAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG-EKDFSALIARLKKENIDFVYY 222 AI+++ YG G+ Q ++ A +V + I G + DFS++I+++++ D + Sbjct: 181 FAILYENNDYGAGVLEQSQIAIEEAGCEIVCTESILTGEQTDFSSIISKIRESGADAILM 240 Query: 223 GGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEG-MLVTMPKRYDQDPAN 281 G Y E G +++Q + GL +G+ + + G+AA+G ++T DQ Sbjct: 241 GVDYNESGLVMKQMKDAGLDLPRYATDGLFTDAFIEVGGEAADGTTVLTSFITSDQSENV 300 Query: 282 QGIVDALKADK-KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP 340 Q + + + + Y + + A+E G + A+ + V G Sbjct: 301 QNFIKKYQEKYDGEMPSIFQAEGYDCGKIVIEAIENAG-TDRKAIRDYMATMSYQGVTGD 359 Query: 341 LNWDEKGDLKGF 352 +DE GD+ Sbjct: 360 CTFDENGDVNIP 371 >UniRef50_B2JW90 Extracellular ligand-binding receptor n=1 Tax=Burkholderia phymatum STM815 RepID=B2JW90_BURP8 Length = 375 Score = 331 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 114/371 (30%), Positives = 174/371 (46%), Gaps = 7/371 (1%) Query: 5 AKTIIAGMIALAISHTAMADDI-KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GI 62 K ++AG+ S T +AD + K+ V G ++G A G GAR A++D+NAK + Sbjct: 6 MKMLVAGLGVALASATVLADTVVKIGVAGPLTGSQAASGKDNERGARLAVEDLNAKHMTL 65 Query: 63 KGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G L + DD DPK V VA K+V++G+ VIGH S T PAS IY D ++MI Sbjct: 66 NGQPLKFELISVDDQSDPKAGVTVAQKLVDNGVLAVIGHWNSGVTIPASKIYNDAKVIMI 125 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 +P A+NP LT GY ++ R D+ G A Y T+ +R+A+I D+ YG G+A Sbjct: 126 TPAASNPALTVPGYPYVFRLTTDDNVLGAKMADYAANTLHLKRVAVIDDRTAYGAGVADV 185 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 K ++V + T DF A+++R+K E ++YGGYY + + RQ R +G Sbjct: 186 FASTAKKQGIDIVAREYATDHTVDFKAVLSRVKLEKPQAIFYGGYYGQAAYLARQMRDLG 245 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVT--MPKRYDQDPANQGIVDALKADKKDPSGP 298 + MG +G+ +A A + + P + KA Sbjct: 246 INAVLMGGDGLCVGEFPKLADGALDKKMYCPQGGVPLAALPDGKRFEGRFKAAYGVDPDQ 305 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358 YAA + A+ + S L K L NT+ G + +D++G+ V+ Sbjct: 306 KAPSFYAATMMMGAAIAKAQSLSAETLDKTLHQTTFNTLFGQVRFDQRGEWIKAPMTVY- 364 Query: 359 WHADGSSTAAK 369 W A GS + Sbjct: 365 WSAGGSIVPVE 375 >UniRef50_A0LKN6 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKN6_SYNFM Length = 376 Score = 331 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 86/368 (23%), Positives = 158/368 (42%), Gaps = 9/368 (2%) Query: 1 MKRNAKTIIAGMIA--LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M+R + ++A L+ A+ I V + ++SG A A++++N Sbjct: 1 MRRFGSLCVMILLAIVLSACPGLAAESITVGAIFSLSGIAATHNGPLIPMLELAVEEVNE 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG++G + V D+ P +V A + V G+ VIG SS + + + + GI Sbjct: 61 GGGLQGRPVKLVFLDNQSTPIGSVKAAEEAVRLGMTAVIGAHWSSHSLAMAPVLQKAGIP 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII-HDKQQYGEGL 177 MISPG+T+P +T+ G +I R +DS QG A++ + + +R+A+ + + Y L Sbjct: 121 MISPGSTHPMVTRVG-DYIFRICFVDSFQGRAMARFAFKELGARRVAVAKNIDEDYSAML 179 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 A + + V DFS ++ ++++ D VY GY + G ++RQ Sbjct: 180 ADCFSESFQLYGGKVACEVQYRGKAVDFSDIMEQIRRARPDVVYVPGYTRDSGLLIRQGV 239 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPS 296 S+G++ F+G + S+ AGDA EG + P + + + Sbjct: 240 SMGIRATFLGGDAWDEISIY--AGDAVEGSYQSAPWHPSVPRAESLRLKELYFRKYGAEI 297 Query: 297 GPYVW-ITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDF 354 + + Y AV L A+ R G+ + + L G +++ GD + Sbjct: 298 KSFSAPLAYDAVMLLVDAIRRAGTSDRARIRDCLAGTLDFRGATGLISYHGGGDPIDKEI 357 Query: 355 GVFQWHAD 362 + +W Sbjct: 358 VMLKWEKG 365 >UniRef50_Q39HK1 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=30 Tax=cellular organisms RepID=Q39HK1_BURS3 Length = 404 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 107/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%) Query: 4 NAKTIIAGMIALAISHTAMADD---IKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN-AK 59 + A ++ +A S A AD + + ++G +A G N AR AI++IN + Sbjct: 29 RMPLVGATVVLVAASMQARADTPSVVLIGHAAPLTGQLANMGKDSENAARLAIEEINSRQ 88 Query: 60 GGIKGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGI 117 + G + DDA DP+ VA K+V+DG+ V+G + S + PAS IY D + Sbjct: 89 PVVGGKPVRFQLDSQDDAADPRTGTQVAQKLVDDGVVAVVGDINSGVSIPASRIYNDAHV 148 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 IS G+TNP TQ+GY+ R D+ QGP A+Y + T+ +R+A+I D YG+GL Sbjct: 149 TQISQGSTNPVFTQQGYRTTYRLVATDAMQGPALARYAIATLGAKRVAVIDDSTAYGQGL 208 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 A + KA+ A VV + DF A++ ++K D + YGG G +++QA Sbjct: 209 ANEFEKAAKASGAQVVTREATNDKAIDFRAILTKIKGLQPDVIMYGGSDATAGPLVKQAA 268 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVT-MPKRYDQDPANQGIVDALKADKKDPS 296 ++G++ + +G +G + +AGDA + ++ + + P Q + A Sbjct: 269 NLGIRARVLGGDGACTDKMIGLAGDAIDNLVCSEAGLALSKMPKGQDFNNRYVARYNAQI 328 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGV 356 Y Y AV + A++R GS + ++ + A + V G + +D +GDLK + Sbjct: 329 DAYAPFAYDAVYVIYDAIKRAGSTDRAKVLAAMPATQYDGVTGRIAFDSRGDLKNAAITI 388 Query: 357 FQWHADGSSTA 367 +++ + A Sbjct: 389 YRFKDHKKAVA 399 >UniRef50_Q67LV0 Branched chain amino acid ABC transporter substrate-binding protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67LV0_SYMTH Length = 395 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 91/363 (25%), Positives = 159/363 (43%), Gaps = 6/363 (1%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 +A T +G A S ++ + V+G ++G A++G + G A+++INA GG++ Sbjct: 28 SAATAPSGAQGSAGSQNGAQGEVLIGVMGPLTGDSAEYGKIWRRGFDLALEEINAAGGVQ 87 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G L V D DPKQ+ AVA K VND + VIG S ++ AS I++ G++ + Sbjct: 88 GRPLNYVFEDTQSDPKQSPAVAQKFVNDPRVVAVIGDFSSPASMAASPIFQRAGLVQLGI 147 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 ++P+ T+ G I + + + P A+ +E + +R+A++H +G+ A Sbjct: 148 TNSHPDFTKTG-DFIWSNSTSQTDEAPFLARLAVEQLGRKRLAVLHQNTDWGKTTADLFV 206 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 + +A A VV + EKDF ++ + + D + YY + + +Q +VGL Sbjct: 207 EQARALGAEVVLQEAYLLTEKDFRPVLTKARDAQPDALVLISYYNDGALIAQQIPAVGLD 266 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVW 301 + V + N+ G A EG+ D P Q V+ + + Sbjct: 267 VTVLAASSVYSPQFLNLGGAAVEGVYTVSRFHPADPRPEAQQFVERFRERYGTDPDTFAA 326 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKANGA-NTVI-GPLNWDEKGDLKGFDFGVFQW 359 Y ++ LA L R G + AL L+ T++ G + E L+ F Sbjct: 327 GAYDGMKILAAVLNRVG-VDRKALRDGLEQAEHLETILQGATAFGEDRRLRNPRFVPLVV 385 Query: 360 HAD 362 Sbjct: 386 RGG 388 >UniRef50_A4J594 Extracellular ligand-binding receptor n=2 Tax=Bacteria RepID=A4J594_DESRM Length = 396 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 85/358 (23%), Positives = 165/358 (46%), Gaps = 9/358 (2%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 ++ + IK+ +GA +G A +G G + A +DIN GG+ G K+ +E D Sbjct: 36 GSSNGESIKIGFLGAKNGNHAAFGIPTLEGMKMAAEDINKAGGLLGKKIEIIEEDHGSKN 95 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 + V K++ D + ++G ++ T+ A+ I +++ ++++S GA + + G +I Sbjct: 96 TEGANVTQKLITRDKVVAIVGDPTTAITKIAAPIAQEKKVVLLSAGAVGTGVVENG-DYI 154 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFD 196 R LD+ P KY+ E + +++A+I Y GL++ + L +V Sbjct: 155 FRDTLLDAVAAPAVTKYVKENLGWKKVAVITSMNNDYSVGLSKLFRAALVDNGIEIVAEQ 214 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 I G+++FSA + +K++N D + + GYY E G +++ R G+KT +G +G+ L Sbjct: 215 SIQDGDQNFSAQVTAIKEKNPDGIVFTGYYTEGGLFMKEVRKQGMKTVMVGGDGLLGDVL 274 Query: 257 SNIAGDAAEGMLVTMPKRYDQD---PANQGIVDALKA-DKKDPSGPYVWITYAAVQSLAT 312 + G+A EG ++ D++ + ++A K + + Y AV +A Sbjct: 275 MKMGGEAVEGSMIYCGFAADENKAGEKTKKFIEAYKTGNNGTLPDMFAAQGYDAVMLIAD 334 Query: 313 ALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 A++ SD P +L V G + + E + + + G T + Sbjct: 335 AIKAANSDVPEKFRAELAKTKDWTGVSGIITFQENREPIKSPVYLLEVK-GGKFTVKE 391 >UniRef50_Q4G268 HmgD n=1 Tax=Pseudomonas putida RepID=Q4G268_PSEPU Length = 382 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 117/369 (31%), Positives = 182/369 (49%), Gaps = 4/369 (1%) Query: 2 KRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 + T + ++A+ ++ A ++ +++ G ++GP A G +G + A+++ N + Sbjct: 8 RTALATAVTLLMAMGTANAADSEVVRIGFAGPLTGPSAHQGQDVEHGIQIAVEEANQQQL 67 Query: 62 IKGDKL---VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GDK+ V DD DP+ AVA ++V+ + VIGH S ++ PAS IY GI Sbjct: 68 KIGDKVAQFKLVSEDDVADPRTGTAVAQRLVDSKVAVVIGHYNSGTSIPASKIYAAAGIP 127 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 ISP ATNP LTQ+G + RT D++ G A Y++ +K QRIAI D+ YG+GLA Sbjct: 128 QISPSATNPTLTQQGIPSVFRTVNDDATLGRYAGNYLVSQLKAQRIAIFDDRTAYGQGLA 187 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 V +KAA NVV + DF+A++ K + D V++ + M +Q ++ Sbjct: 188 DEVTRAVKAAGGNVVVREYTNDKSTDFNAILTTAKAQKADAVFFAALDYQAAPMAKQMKN 247 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSG 297 +GLK +FM + N S +AG AAEG D P LK Sbjct: 248 LGLKARFMNIGNLPNDSFKQMAGSAAEGTYAWNYGTPLLDMPKGAAFEQKLKDKFGVGVV 307 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 Y A + A+ + GSD+P + LK+ + V G + +D+KG+LK VF Sbjct: 308 QSSPAAYDATWAAINAMVKAGSDDPKVYLPVLKSQSYDGVTGTIAFDDKGNLKNPAATVF 367 Query: 358 QWHADGSST 366 Q+ G T Sbjct: 368 QFADGGWKT 376 >UniRef50_D1U8G6 Extracellular ligand-binding receptor n=2 Tax=Desulfovibrio RepID=D1U8G6_9DELT Length = 383 Score = 330 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 173/348 (49%), Gaps = 5/348 (1%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK-LVGVEYDDACDPKQ 80 +K+ + ++GP A G+ G A+ + A+GGI G +V V D ACDPKQ Sbjct: 29 ADQILKIGTLSPLTGPYAADGNDIKQGTEAAVAVMKAQGGIPGYTDIVVVPTDSACDPKQ 88 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 AVA ANK++ND + VIG CSS+T PAS+ +E I+MI+P +T+P +T+RG ++ RT Sbjct: 89 AVAAANKLINDKVPAVIGAYCSSATIPASETLAEENIIMITPASTSPTVTERGLPYMFRT 148 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 G D Q P A K++ E + + I+ DK Y +G+A V K A V+ D + Sbjct: 149 CGRDDHQAPAAVKFMKEVENVKTVFIVDDKTTYSQGMADGVAAAAKEAGIEVLGHDHVNQ 208 Query: 201 GEKDFSALIARLKKENIDFVYYGG-YYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+KDFSA++ +K +N D Y M+ QAR +G+ MG + V + L Sbjct: 209 GDKDFSAVLTMVKDKNPDLFYISLQNSSSGATMVIQARRMGITAILMGQDAVYHPKLIEF 268 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 A +EGM T + + G Y +Y + + A++ G+ Sbjct: 269 AKADSEGMFCTFGDIDTDTQGYKDFKANYSSKY-SEPGAYSAYSYDSAMAYMLAVKAAGT 327 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 +P + ++L + +++DEKGD G ++ V+Q DG Sbjct: 328 TDPAKVREELLKLSFDGASKKVSYDEKGD-SGSNYTVYQVK-DGQFVP 373 >UniRef50_A3RVH7 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=5 Tax=Betaproteobacteria RepID=A3RVH7_RALSO Length = 393 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 106/351 (30%), Positives = 172/351 (49%), Gaps = 6/351 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG-IKGDKL--VGVEYDD 74 +++ G ++G A WG NGAR A++D+N KG I G K+ + DD Sbjct: 37 GWAQAEQTVRIGNAGPLTGGAAHWGKDNENGARLAVEDLNKKGLVIGGKKVRFELLSEDD 96 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 DP+QA+ VANK+ + G+K ++GH S + PAS IY GI IS ATNP+LTQ+G+ Sbjct: 97 QADPRQAMVVANKLADSGVKAMLGHFNSGAAIPASAIYARAGIPDIS-VATNPQLTQQGF 155 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + R D G +++ ++ + +R+AII D+ YG+G A +K A +V Sbjct: 156 GNTFRIVASDDDVGVALSRFAVKALNAKRVAIIDDRTAYGQGAAEVFAKEVKGLGATLVS 215 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + DF A++ +K + D ++YGG + G + RQ + +G+ + +G +G+ Sbjct: 216 QQYTSDKATDFMAILTAIKSKRPDVIFYGGMDAQGGLIARQMKQLGIGAKLLGTDGLCTG 275 Query: 255 SLSNIAGDAAEGMLVTM--PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 ++ I+ A G L K D P KA Y Y ++ ++A Sbjct: 276 EVAKISAGAVNGTLYCTRGGKALDTMPNGADFARRYKARFGTDVLNYAPYLYDSLMTVAA 335 Query: 313 ALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADG 363 A++ S EP + L + + GP+ +DEKG+LK F VF + Sbjct: 336 AMQAADSVEPPRYLGALARIRHDGITGPVAFDEKGNLKNPGFTVFTYQEGK 386 >UniRef50_A1WJ16 Extracellular ligand-binding receptor n=2 Tax=Proteobacteria RepID=A1WJ16_VEREI Length = 358 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 179/357 (50%), Positives = 242/357 (67%), Gaps = 1/357 (0%) Query: 13 IALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEY 72 + +A A +++A+ G MSG +AQ+GDM G AI+ INA G G KL V Sbjct: 1 MLAIFGLSAQAQTVQIAIAGPMSGSVAQYGDMVKAGVLTAIEQINAAGAAGGHKLEAVMM 60 Query: 73 DDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ- 131 DDAC+PKQAVAVANKIV+ IKYVIGH+CS ST PASDIYE+EGI+M++P AT P++T+ Sbjct: 61 DDACEPKQAVAVANKIVSQRIKYVIGHMCSGSTIPASDIYENEGIVMVTPSATVPQITEG 120 Query: 132 RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANAN 191 + + I RT G D QGP AA++I+ V+P ++A++HDKQ YG+GLA SV+ L A Sbjct: 121 KKRKFIFRTTGRDDQQGPVAARHIIAKVQPGKVAVLHDKQSYGQGLATSVKKVLDEAKVP 180 Query: 192 VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV 251 VV F+G+ AG+ D+SA+I ++K + DFVY+GGY+PEMG +LRQAR G+K FMGPEGV Sbjct: 181 VVLFEGVNAGDSDYSAVITKIKAQGADFVYFGGYHPEMGLLLRQAREQGVKATFMGPEGV 240 Query: 252 GNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 GN ++ IAG A+EGMLVT+P + +DPAN +V A K+D +GP+ YAAV+ +A Sbjct: 241 GNKDVTAIAGPASEGMLVTLPADFSEDPANAALVKAFADKKRDINGPFQLPAYAAVKIIA 300 Query: 312 TALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 A+ T S +P + + N T IG + +D +GDLK F F VF WH D + TA Sbjct: 301 DAMAGTKSADPAKVAAYMHQNAFQTPIGKVEYDAQGDLKSFKFVVFTWHKDATKTAV 357 >UniRef50_B8FN98 Extracellular ligand-binding receptor n=12 Tax=Bacteria RepID=B8FN98_DESAA Length = 401 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 118/349 (33%), Positives = 195/349 (55%), Gaps = 4/349 (1%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA-KGGIKGDKLVGVEYDDACDPKQAV 82 + +K+AV GA +G +A +G A ++ +NA +GG+ G K++ V DDAC P+ A Sbjct: 53 EPLKLAVAGAHTGDLASYGIPSVRAAEILVEHVNATQGGVGGRKVILVTEDDACKPEMAT 112 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG-YQHIMRTA 141 A K+V + + V+GH+CS +T+ A IY+D GI+ ISP ATNP+LTQ G Y + RT Sbjct: 113 NAATKLVGEDVDLVVGHICSGATKAALGIYKDSGIIAISPSATNPDLTQSGDYPNFFRTI 172 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAAN-ANVVFFDGITA 200 D +Q + L+ + +IA++HDK YG+GLA + L+ + A VV ++GIT Sbjct: 173 ASDDAQARLEVDFALDVLGLTKIAVLHDKGDYGKGLAEFAKKFLEESGKAEVVLYEGITP 232 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G D+SA++ ++ + V +GGY+PE +++ Q R + T F+ +GV + + +A Sbjct: 233 GGMDYSAVVQKINRSGAQAVIFGGYHPEASKIVMQMRKKDMDTIFISDDGVKDDTFIKVA 292 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 GD AEG+ T PK ++P K + G + Y+AV +L A++++GS Sbjct: 293 GDYAEGVYATGPKDTSKNPLAVEADKLHKEKYGEDYGAFYLNAYSAVLALFNAVDKSGST 352 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + A+ L+ T +G + +D++GD G F V+Q +G + Sbjct: 353 DYEAVSNALRNEYVATPLGIIKFDDRGDAIGVGFSVYQVQ-NGKYVELE 400 >UniRef50_A5CZP1 ABC-type branched-chain amino acid transport systems, periplasmic component n=2 Tax=Pelotomaculum thermopropionicum SI RepID=A5CZP1_PELTS Length = 388 Score = 328 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 91/380 (23%), Positives = 157/380 (41%), Gaps = 17/380 (4%) Query: 4 NAKTIIAGMIALAISHTA---------MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIK 54 + +A ++ S + A +IK+ VV +SG A +G G A Sbjct: 12 SICLSLALLVTAGCSSPSGPGGGAPNDAAGEIKIGVVATLSGDGADYGVSIKRGLETARD 71 Query: 55 DINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYE 113 IN GGI G K+ V D D +A+ K++N D + +IG S A + + Sbjct: 72 RINGAGGINGRKISLVIEDSHGDKNEAINAVQKLINRDRVLAIIGPTNSGEMFAAGPVAD 131 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQ 172 G++++ T + + G ++ R + + + P + E + R+A+++ Sbjct: 132 KAGVVIMGTSNTARGIGEIG-PYVFRNSLPEDNIIPITVRKSKEKLGFNRVALLYSSNND 190 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 + A++ ++ L+ +V G+ +F A + R+ + + Y E + Sbjct: 191 WAVSSAKTFEEALREQGVAIVETQTFADGDTNFQAQLTRVAAAKPEALAVSALYKEAALL 250 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ-DPANQGIVDALKAD 291 L QAR G+ MG G + L IAG+AAEG LV P + DPA + V+ K Sbjct: 251 LIQARQQGINLPVMGGNGFNDPELIKIAGEAAEGALVGSPWYAGKDDPAVRDFVEEYKKR 310 Query: 292 KKDPSGPYVWITYAAVQSLATALERTG-SDEPLALVKDLKAN-GANTVIGPLNWDEKGDL 349 + +Y A+ +A AL+ G + + L A V G ++DE G+ Sbjct: 311 YHTVPNQFAAQSYDALGIMAEALKTEGAAADRARFRDALAAIKDYRGVTGRFSFDENGNP 370 Query: 350 KGFDFGVFQWHADGSSTAAK 369 D V Q A G+ K Sbjct: 371 L-MDAVVLQI-AGGTYREVK 388 >UniRef50_A5IN43 Extracellular ligand-binding receptor n=9 Tax=Thermotogaceae RepID=A5IN43_THEP1 Length = 370 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 85/330 (25%), Positives = 155/330 (46%), Gaps = 10/330 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ V+ M+G I+ +G M + G + A ++ K + G+K+ + D + +A A Sbjct: 21 VKIGVILPMTGGISAFGRMVWEGIQIAYEE---KPTVLGEKVELLLLDTRSEKTEAANAA 77 Query: 86 NKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 ++ ++ + + +IG + S+ + + I E+ + MI+P +TNP +T +G + + R +D Sbjct: 78 SRAIDKEKVLAIIGEVASAHSLAVAPIAEENKVPMITPASTNPLVT-QGRKFVSRVCFID 136 Query: 145 SSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 QG A + + + +R+ + D +Q Y GL+ +D V +G++ Sbjct: 137 PFQGVAMAVFAYKNLGAKRVVVFTDVEQDYSVGLSNFFKDKFTELGGQ-VKRVFFRSGDQ 195 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 DFSA ++ N D +Y GYYPE+ + RQAR +G + +G L I G+A Sbjct: 196 DFSAQLSVAMSFNPDAIYITGYYPEIALISRQARQLGFTGYILAGDGADAPELIEIGGEA 255 Query: 264 AEGMLVTMPKRY--DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDE 321 EG+L T +P + V+ K + Y A L A+ER G + Sbjct: 256 VEGLLFTTHYHPKAASNPVAKKFVEVYKEKYGKEPAALSALGYDAYMVLLDAIERAGGFD 315 Query: 322 PLALVKDLKAN-GANTVIGPLNWDEKGDLK 350 + ++++ N G +N DE GD Sbjct: 316 TEKIAEEIRKTEDFNGASGIINIDENGDAI 345 >UniRef50_D1ALD8 Extracellular ligand-binding receptor n=6 Tax=Fusobacteriaceae RepID=D1ALD8_SEBTE Length = 381 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 101/383 (26%), Positives = 176/383 (45%), Gaps = 25/383 (6%) Query: 1 MKRNAKTIIAGMIALAISH----TAMADD---------IKVAVVGAMSGPIAQWGDMEFN 47 MK+ + + L TA A +K+ +G ++G +AQ+G Sbjct: 1 MKKLFSLLAIATLTLVSCGKNADTAAAGTETKTEDKTVVKIGFIGPLTGGVAQYGIATKE 60 Query: 48 GARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQ 106 G I++INA+GGI G KL + DD D K+AV K+V ND + +IG + S + Sbjct: 61 GVELKIEEINAQGGINGKKLELITVDDKGDAKEAVNAYKKLVSNDKVDMIIGAVTSVPSN 120 Query: 107 PASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAI 166 +++ E + + MI+P TN ++T G +++ RT D QG +Y ++IA+ Sbjct: 121 AIAELAEKDKMPMITPTGTNIDITG-GKKYVYRTTFTDPFQGAVMGRYATAK-GFKKIAV 178 Query: 167 IHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGY 225 + + Y GL++S + K A ++ + T +KDF +++ +K N+D +Y Y Sbjct: 179 LTNKSDDYSTGLSQSFIEEAKKGGAEII-ENSYTKEDKDFKSILTNIKNANVDAIYIPDY 237 Query: 226 YPEMGQMLRQARSVGLKTQFMGPEGVGN--ASLSNIAGDAAEGMLVTMPKRYDQDPANQG 283 Y +G + QA+ +G+ QF+G +G + + + A + V+ D+ P Q Sbjct: 238 YETIGLIATQAKELGINAQFLGGDGWDGVQTNFAAVTDGA---LFVSQYAANDESPLVQN 294 Query: 284 IVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 + A K + + Y V+ +A AL+ +L++ KA + V G L + Sbjct: 295 FIKAYNEKYKKDPILFAALGYDTVEIIANALKTAKDSSADSLIEAFKATDLDLVTGKLVF 354 Query: 344 DEKGDLKGFDFGVFQWHADGSST 366 DE D K + DG T Sbjct: 355 DENNDPKKIADIIE--IKDGKLT 375 >UniRef50_A9BYU2 Extracellular ligand-binding receptor n=2 Tax=Comamonadaceae RepID=A9BYU2_DELAS Length = 376 Score = 327 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 111/376 (29%), Positives = 180/376 (47%), Gaps = 9/376 (2%) Query: 1 MKRNAKTIIAGMIA-LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK + K IA ++A + A I++ +G +SGP A +G NG R AI ++NAK Sbjct: 1 MKMSRKLCIAAVVAGMGGVAMAQEQVIRIGHIGPVSGPQANFGKDNENGVRMAIDELNAK 60 Query: 60 G-GIKGDKLV--GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 G I G K+ V DD DPKQ A A K+ +D + + L S P+S +++D G Sbjct: 61 GMEIAGKKVKFQLVAEDDVADPKQGTAAAQKLCDDKVAGAVAFLNSGVAIPSSKVFQDCG 120 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 I MI+ ATNP+LT+ G+ R D++ G AKY ET+K + +AII D+ YG+G Sbjct: 121 IPMITGAATNPDLTKPGWNTTYRVIANDNALGAALAKYAAETLKLKTVAIIDDRTAYGQG 180 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + + VV + DF A++ +K + + ++YGG Y + G MLRQ Sbjct: 181 LANVFKKDAEKLGVKVVASEFTNDKATDFMAILTSIKAKKPEGIFYGGMYGQAGPMLRQM 240 Query: 237 RSVGL-KTQFMGPEGVGNASLSNIAGDA--AEGMLVT-MPKRYDQDPANQGIVDALKADK 292 +GL ++ G +G+ L+ +A A + ++ + P A Sbjct: 241 AQLGLNDAKYFGGDGLCVPELAKVAAGAKPLDNVICADGGASLAKMPGGTEWKKRYDAKY 300 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 Y Y A LA A++R S +P + L+ + V + +++ G++K Sbjct: 301 PGQFQVYSPYFYDATMMLADAMKRANSWDPKVYIPFLQKADYSGVTSKIAFEKNGEMKNP 360 Query: 353 DFGVFQWHADGSSTAA 368 + + + +G TA Sbjct: 361 SYTLSVFK-NGQKTAL 375 >UniRef50_Q5SIN9 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=2 Tax=Thermus thermophilus RepID=Q5SIN9_THET8 Length = 387 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 107/377 (28%), Positives = 183/377 (48%), Gaps = 11/377 (2%) Query: 2 KRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 R ++AG+ AL ++ A ++ IK+A + +SGP A G+ GA A+++ + Sbjct: 1 MRKIGFLVAGVAALGLAL-AQSNVIKIATMSPLSGPQAALGEQIKLGAELAVEEAKERFK 59 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G +LV V YDD +P VA AN+++ND I ++G L S PAS++ ++M+ Sbjct: 60 ALGFELVLVPYDDQANPDVGVANANRMINDPDILGLVGTLNSGVAIPASEVLARVNLVMV 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SP TNP +T R ++ R G D QGP AA+++ +K +R+ +IHDK YG+GLA Sbjct: 120 SPANTNPVVTDRKLPNVNRIVGRDDVQGPAAAEFVYNDLKLRRVFVIHDKTAYGQGLAEE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + +A VV F G + +F +I +++ +N VY+GG Y ++G +Q R G Sbjct: 180 FRKRFEALGGRVVAFIGTEE-QSNFVPIINQIRAQNPQLVYFGGIYSQIGPFTKQLRERG 238 Query: 241 LKTQFMGPEGVGNASLSNIAGD-AAEGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGP 298 L+ M +G+ ++ +AG A+G T P + + + KA Sbjct: 239 LRMPLMSGDGLDSSEFERLAGSQNAKGAYYTTVAGPVSAFPQAKALAERFKAKYGKDIEG 298 Query: 299 YVWITYAAVQSLATALERT------GSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 + Y A + + ALE + ++++ + G + +D KGD++ Sbjct: 299 FGIYAYDAARVILAALENAIKANGGKKPTRAQVAQEVRKVKLEGITGTIEFDSKGDIQKA 358 Query: 353 DFGVFQWHADGSSTAAK 369 + V Q G+ K Sbjct: 359 KYFVMQVAGTGNWADNK 375 >UniRef50_Q39AQ6 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=92 Tax=cellular organisms RepID=Q39AQ6_BURS3 Length = 428 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 109/371 (29%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA-KGG 61 + + +A AL+ +H AD +K+ ++GP + +G G + AI D NA + Sbjct: 54 KVSHVALAAACALSGAHAIAADVVKIGFAAPLTGPQSNYGTDMQKGVQLAIADFNATRPT 113 Query: 62 IKGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 I G + DD DP+ VA ++++D ++ +IGH S ++ PASD+Y+ G+ Sbjct: 114 IGGKPVTFQLDSQDDQADPRTGTTVAQRLIDDNVRGIIGHFNSGTSIPASDLYDRAGLPQ 173 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 IS AT+P+ T RGY+ R D+ G Y ++T++ +RIAII D+ YG+G+A Sbjct: 174 ISM-ATSPQYTARGYKTTYRLLTSDAQAGRIVGTYAVKTLRFKRIAIIDDRTAYGQGIAD 232 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 ++AA ++ D DFSA++ LK N D ++YGG + M+R+ R + Sbjct: 233 EFAKAVEAAGGTIIKRDFTNDKALDFSAILTNLKGMNPDAIFYGGGDAQSSPMIRKMRQL 292 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGP 298 G+K+ F+ E + + + GDAAEG +V M ++ P G KA + Sbjct: 293 GMKSAFVTGEMSRSPTFLKVGGDAAEGAIVYMGGLPKEKMPGFSGYAARYKARFNEDVIT 352 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP-LNWDEKGDLKGFDFGVF 357 Y Y +L TA++ S +P L V P + +D KGDLK ++ Sbjct: 353 YSPYAYDGTIALLTAMKDANSTDPKVYTPYLGKLSVKGVSAPSIAYDTKGDLKDAPVTIY 412 Query: 358 QWHADGSSTAA 368 + G+ Sbjct: 413 KVEH-GAFKPV 422 >UniRef50_D0BNJ8 Branched-chain amino acid ABC transporter amino acid-binding protein n=2 Tax=Granulicatella RepID=D0BNJ8_9LACT Length = 388 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 85/385 (22%), Positives = 168/385 (43%), Gaps = 21/385 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 +K+ +++ I S ++ +K+ ++G +A +G N + A++ Sbjct: 4 LKKFGLGLVSAAILAGCSAGGASNGNTVKLGGNFELTGNVAAYGSAMDNAVKLAVEQ--- 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 KG + +L V YD+ + + +VA K+V++ + V+G + Q + I E I Sbjct: 61 KGKLLDKELKYVSYDNKSEKTEVASVAKKLVSEKVVGVVGPATTGDAQVSIPIMEQAKIP 120 Query: 119 MISPGATNPELT-------QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK- 170 + P T +T + Y +I R D+ QG A ++ + ++AI+ D Sbjct: 121 AVFPATTGDGITLKDAKNPESVYDYIFRVCFSDNYQGVVGAGFVSQKFPNAKVAILQDSA 180 Query: 171 QQYGEGLARSVQDGLK--AANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPE 228 Y +GL+ + + +V + + + DF A++ LK ++ D +Y GYY E Sbjct: 181 SDYSKGLSEAFEKTYTDAKIGGQIVAKETYQSKDTDFQAVLTSLKSKSFDVLYIPGYYEE 240 Query: 229 MGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAE--GMLVTMPKRY-DQDPANQGIV 285 +G +++QAR +G+ +G +G+ + L+ +AG+ A + T D Q + Sbjct: 241 VGLIIKQARELGITQPIVGGDGLSSEKLAELAGNKANLTNVFYTAHFSAKSTDADVQEFI 300 Query: 286 DALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWD 344 A K + + Y A Q L A+E+ GS + A+ K L ++ + V G Sbjct: 301 KAYKEKYNTTPDSFSALAYDAAQLLMKAIEKAGSTDAQAIKKALAESTDFDGVTGTFTMG 360 Query: 345 EKGDLKGFDFGVFQWHADGSSTAAK 369 + + ++ +G +AK Sbjct: 361 KDHTPLKSAVVI-EFQ-NGEEVSAK 383 >UniRef50_B9Z072 Extracellular ligand-binding receptor n=2 Tax=Chromobacterium group RepID=B9Z072_9NEIS Length = 381 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 106/377 (28%), Positives = 163/377 (43%), Gaps = 12/377 (3%) Query: 1 MKRNAKTIIAGMIALAI-------SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAI 53 MK+ + ++AL + +K+ +SGP A +G N + AI Sbjct: 1 MKQRFPRSMTMVLALGGMMAPFAIAAAQADTVVKIGFSSPLSGPQAHYGKDNENATKMAI 60 Query: 54 KDINAKGG-IKGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASD 110 D+NAK I G K+ V DD DP+ VA ++V+ G+K VIGH S + PAS Sbjct: 61 DDLNAKPLTIAGQKVTFELVSEDDQADPRVGTQVAQRLVDSGVKAVIGHFNSGVSIPASR 120 Query: 111 IYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK 170 IY D GI +S +TNP T GY+ R G DS G +Y + +K QRIA+I D+ Sbjct: 121 IYSDAGIPQLS-VSTNPAFTTAGYKTTFRLVGSDSQVGGALGRYAVAQLKAQRIAVIDDR 179 Query: 171 QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 YG+G+A ++ V + DF+A++ LK + D ++YGG + Sbjct: 180 TAYGQGIADEFIKSIQGLGKQPVKREYTNDKASDFTAILTSLKAAHPDVIFYGGADAQAA 239 Query: 231 QMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALK 289 M +Q + +GL + MG + + + +AG A G +P PA + K Sbjct: 240 PMAKQMKRLGLNAKLMGGDMLSTPTFIKLAGADAVGHFSAVPGGELGARPAGKDFEARYK 299 Query: 290 ADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDL 349 A K Y V +A A++R S EP + + V ++D G+L Sbjct: 300 ARYKQDVVLLGPQFYDGVMIVADAMKRANSTEPAKFLPLIAKTAYKGVTADFSFDSAGNL 359 Query: 350 KGFDFGVFQWHADGSST 366 K + Sbjct: 360 KHAPVTISAVEGSNWKV 376 >UniRef50_C7HZL2 Extracellular ligand-binding receptor n=2 Tax=Thiomonas intermedia K12 RepID=C7HZL2_THIIN Length = 382 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 98/360 (27%), Positives = 172/360 (47%), Gaps = 6/360 (1%) Query: 9 IAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG-IKGDKL 67 +A L +S A + + V +SGP+A G NG + A+ +NA+ I G + Sbjct: 12 LALFAGLGLSAQAAEPRVVLGVAVPLSGPLAASGQDAVNGVQMALNQLNAEHARIGGKSV 71 Query: 68 V--GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT 125 DD P QA VA K+V++G+ V+GH S T PA+ IY GI I+P +T Sbjct: 72 RWAMDAEDDQGLPTQATLVAQKLVDEGVSGVVGHQTSGCTFPAARIYARAGIPQITPSST 131 Query: 126 NPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGL 185 +P++ ++GY+ R D++ G A+Y + + QR+A++ D+ YG+GLA Sbjct: 132 SPKIAEQGYKTFFRLIANDNALGAGLAEYAHDALHVQRVAVVDDRTAYGQGLADVFSAKA 191 Query: 186 KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQF 245 K +VV + DFSA++ R+K ++ ++YGG Y + G ++RQ R +G+ + Sbjct: 192 KKLGMDVVDREYTDDKATDFSAILTRIKADHPQVIFYGGMYSQAGPLVRQMRQIGITARL 251 Query: 246 MGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPS-GPYVWIT 303 MG +G+ ++ +AGDA G + + P Q A+ + Y Sbjct: 252 MGGDGICAPIMAKVAGDAVNGTICAQGGAPLSELPKGQAWKARYDAEFGAAAFQLYSPNA 311 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKANGANTVI-GPLNWDEKGDLKGFDFGVFQWHAD 362 + A LA A+ + GS +P + ++ + V +++ G+L + ++ Sbjct: 312 FDAAMVLAHAMMKAGSSDPKVCLPYIRHIDYDGVTDSDIHFTATGELADPSITLSEFEHG 371 >UniRef50_C9ACC1 Branched-chain amino acid transporter n=3 Tax=Enterococcus casseliflavus RepID=C9ACC1_ENTCA Length = 388 Score = 323 bits (830), Expect = 6e-87, Method: Composition-based stats. Identities = 91/355 (25%), Positives = 156/355 (43%), Gaps = 14/355 (3%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 D IK+ +SG +A +G E G A+++INA GG+ G ++ + D+ D +A Sbjct: 34 GDTIKIGANLELSGAVAAYGTAEKEGIDLAVEEINAAGGVLGKQIEIISKDNKSDNNEAA 93 Query: 83 AVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT---QRGYQHIM 138 VA + ND + +IG S +T+ A + M++P T+ +T + + Sbjct: 94 TVAANLATNDKVVAIIGPATSGATKAALPNVTRAQVPMVTPSGTDDAITYTSGKVQEFAF 153 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFDG 197 R+ DS QG AKY E + + I+ D Y GL + ++ +V D Sbjct: 154 RSCFQDSFQGTILAKYAAENLDASKAVILGDNSSDYAIGLTEAFKESYP---GEIVLEDN 210 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 T G+KDF A++ R+K + D ++ GYY E G +++QAR +G+ +G +G G+ + Sbjct: 211 FTEGDKDFQAVLTRIKDVDFDVLFIPGYYTEAGLIIKQARELGIDQAIIGADGFGDEKMV 270 Query: 258 NIAG-DAAEGMLVTMPKR--YDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 AG + + T + + V A + + Y AV + A+ Sbjct: 271 QTAGAENVSNVYYTGHFSTKAPANDKVEPFVAAFNEKYGKEPSAFNALAYDAVYMIKQAI 330 Query: 315 ERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 E S + LA+ L + V G + DE + + + DG T+A Sbjct: 331 EDQNSADSLAIAAGLSELKDFVGVTGEITMDENHNPEKSAVVLG--LTDGKETSA 383 >UniRef50_A8MJQ2 Extracellular ligand-binding receptor n=6 Tax=Bacteria RepID=A8MJQ2_ALKOO Length = 395 Score = 323 bits (828), Expect = 9e-87, Method: Composition-based stats. Identities = 85/395 (21%), Positives = 157/395 (39%), Gaps = 34/395 (8%) Query: 1 MKRNAKTIIAGMIALAISHTAMA-------------------DDIKVAVVGAMSGPIAQW 41 MK+ ++ ++ L++S D IK+ + ++G A Sbjct: 1 MKKRMAILVVWILVLSLSLVGCGGNTPVAPVDGNGGNASNDGDVIKIGIFEPVTGAYAAG 60 Query: 42 GDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHL 100 G++E G R A + + G K+ V D+ D +A + A ++V + + +IG Sbjct: 61 GELEVEGIRLANELYPE---VLGKKVELVLADNKSDVVEAASAAARLVEKEKVTAIIGSW 117 Query: 101 CSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK 160 S + A D+ ++P ATNP +T +G R +D QG A Y +K Sbjct: 118 GSGLSIAAGDVI-KGKAPAVAPSATNPLVT-KGNDFYFRVCFIDPFQGTVMANYAANNLK 175 Query: 161 PQRIAIIHD-KQQYGEGLARSVQDGLKAANAN---VVFFDGITAGEKDFSALIARLKKEN 216 ++ AII + Y GLA+ D K + +V G++DFSA + + + Sbjct: 176 AKKAAIIQEVSNDYSIGLAKFFTDSFKELTGDANAIVEVANYQTGDQDFSAQLLNISNKK 235 Query: 217 IDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD 276 D ++ G + E +++QAR +G+ T +G + I +A EG +++ + Sbjct: 236 PDVIFAPGNFTESALIIQQARQLGIDTPIIGGDTWETPEFIEIGKEAVEGTVLSTFFTSE 295 Query: 277 Q--DPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-G 333 ++ ++A + + Y A + A+ER G+ + L + Sbjct: 296 TPITKESEKFLEAYRNKYGKEPAAVTALGYDAYLLILDAIERAGTTDYDPLKNAIAQTKN 355 Query: 334 ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 G + DE GD + + DG T Sbjct: 356 FEGAAGVITLDENGDAVKDA--ILKIVKDGKFTYL 388 >UniRef50_A9AXZ7 Extracellular ligand-binding receptor n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXZ7_HERA2 Length = 383 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 89/356 (25%), Positives = 153/356 (42%), Gaps = 4/356 (1%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 +A + A + A+ IK+ G MSG A G A+ AI NA + Sbjct: 10 LVIIGLALVSACGGASQPQAETIKIGFFGPMSGNSASDGTHSMYAAKLAIDQANANQTVP 69 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G + YDD DP QA+ VA K+V D ++ VIG SS+T+ A+ +++ GI M++ Sbjct: 70 GKTFELITYDDQLDPNQAITVAQKLVTEDKVRAVIGGSYSSTTRAAAPVFQQAGIPMLAA 129 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 AT+PE+T+ G I R + + QG A Y + + +++ YG + + Sbjct: 130 YATHPEVTKTGS-MIFRVIYITTVQGNALAVYATTKLNYRNFHVLNINNDYGRSITEAFT 188 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 +A ++ +V + DFS+ IA +K + D + GYY + +++Q R G+ Sbjct: 189 KTAQANHSTIVSASEYASDATDFSSQIATIKAKPADALILVGYYAQSADIIKQVRQAGIT 248 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMPKR-YDQDPANQGIVDALKADKKDPSGPYVW 301 +G +G+ + SL + G EG+++ D Q + + Sbjct: 249 LPIIGSDGLDSPSLVELGGSDVEGVILATDFSRNDPRSIVQNFIREYRNAHGIDPDVVAS 308 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGV 356 TY A L A +R+ A+ L A V G + + + ++ V Sbjct: 309 STYDATNLLIDAFKRSPDSSSSAIRDTLAATQTYEGVTGAIVFTPEREVNKTVLFV 364 >UniRef50_A1TSM1 Extracellular ligand-binding receptor n=2 Tax=Acidovorax RepID=A1TSM1_ACIAC Length = 379 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 102/372 (27%), Positives = 176/372 (47%), Gaps = 8/372 (2%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GI 62 T +A +A A +H + +++ + ++GP A G +GA AIK++NAKG + Sbjct: 8 FRLTAMALGLACAAAHAQAQERVRIGFMSPVTGPQAANGGDNRDGALLAIKELNAKGVKV 67 Query: 63 KGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G + DD DPKQ V VA + + I++V+G S T PA+ + D IL + Sbjct: 68 AGKPVVFELDINDDVADPKQGVQVAQTLADKKIRFVLGPYNSGVTVPAARVLNDSDILTL 127 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 + A+NP++T+ GY + R D+ G A Y + +K + +A+I D+ YG+G+AR Sbjct: 128 T-VASNPKITELGYGTLFRIGASDNQLGTKMATYAAQDLKLKTVAVIDDRTAYGQGVARE 186 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + VV + T DFSA++ ++ + V+YGGY P+ G +L+Q R++G Sbjct: 187 FTAQARRLGLQVVATEFTTDKATDFSAILTNIRGAKAEAVFYGGYSPQGGPLLKQMRALG 246 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAE-GMLVTMPKR-YDQDPANQGIVDALKADKKDPSGP 298 + +G +G+ + +N+A + + T D+ Q + +A+ K Sbjct: 247 ITGPLLGGDGICSTETANLAQLTGDLNVYCTQGGSLLDKSDKGQKFAERYRAEYKRDPLT 306 Query: 299 YVWITYAAVQSLATALERTGS-DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 Y Y + LA A+E T S + + + + V G ++D K DLK V+ Sbjct: 307 YAAAFYDGMYLLANAMESTQSTTDTKKIAQAIANGKYAGVTGEFSYDVKHDLKLSAVTVY 366 Query: 358 QWHADGSSTAAK 369 + K Sbjct: 367 TFK-GKDVVPLK 377 >UniRef50_B9Y8T3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8T3_9FIRM Length = 407 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 94/387 (24%), Positives = 166/387 (42%), Gaps = 33/387 (8%) Query: 1 MKRNAKTIIAGMIALAISHTA--------------------MADDIKVAVVGAMSGPIAQ 40 MK+ A M+A++++ A +K+ + ++G +A Sbjct: 5 MKKVFMGAAALMMAVSMAGCGNSGSGNSGTATPEAGGSGTDAAGAVKIGLHYELTGGVAD 64 Query: 41 WGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHL 100 +G E NG+ AIK NA G +K V+YD+ D +AV +A ++ +DG+ V+G Sbjct: 65 YGKAELNGSLLAIKQANAAAGS--EKYGYVKYDNKSDSTEAVTLAAQLASDGVAGVVGPA 122 Query: 101 CSSSTQPASDIYEDEGILMISPGATNPELT--------QRGYQHIMRTAGLDSSQGPTAA 152 S ++ + I D + ++SP AT +T Y ++ R DS QG A Sbjct: 123 TSGASAASYQILNDAKVPVLSPSATQNNVTLTNPDDASSAAYDYVYRVCFEDSYQGAAMA 182 Query: 153 KYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIAR 211 +Y +T+ + I D Y +GL+ + + +V + + + DFS+++ + Sbjct: 183 QYAYDTLGKTKAVIYGDSTTDYAKGLSEAFEKQFTKLGGTIVGKENYVSKDTDFSSVLTK 242 Query: 212 LKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA-AEGMLVT 270 +K + D +Y GYY E G +++QAR +GL G +G + +L ++ G A + T Sbjct: 243 IKGMDFDVLYIPGYYNEAGLIIKQAREMGLDQTITGSDGFDSTTLVDLGGAANLNDVYFT 302 Query: 271 MPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL 329 Q +DA KA+ + + + Y A L A+E GS + A+ L Sbjct: 303 TAYTTVGASDKLQAFIDAYKAEYNEEPNMFSALAYDATNVLIQAIEEAGSSDGPAVQAAL 362 Query: 330 KANGANTVIGPLNWDEKGDLKGFDFGV 356 + V G +D V Sbjct: 363 TKISFDGVTGAFTFDATHTPIKPVLVV 389 >UniRef50_B6ISN6 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=5 Tax=Proteobacteria RepID=B6ISN6_RHOCS Length = 372 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 134/367 (36%), Positives = 204/367 (55%), Gaps = 6/367 (1%) Query: 1 MKRNAKTIIA----GMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M+ + +A A+ ++ A A+ V + ++G +A G+ GA QA+ DI Sbjct: 1 MRIPFLSAMAVPAVLATAILMAGPAAAET-AVGLAAPLTGQLAAVGEQLRRGAEQAVADI 59 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 NA GG+ G+ L + DD P QAVAVAN++ +G+ V+GHL S +T PAS +YEDEG Sbjct: 60 NAAGGVLGEPLRLIPADDGGVPAQAVAVANRLATEGVALVVGHLQSGTTIPASQVYEDEG 119 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 I+ I+P AT+PE+T+ + RT G D QG A ++ +R+A++HD+ YG+G Sbjct: 120 IVTITPTATSPEVTEGDRTLVFRTCGRDDQQGDVAGGWLARHFAGRRVAVVHDQTTYGKG 179 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + + + A N V + +T GE+DF+AL+ R+K N+D VY+GG Y E ++RQA Sbjct: 180 LADATRAAMAAKGLNDVLYTSLTLGERDFTALVTRIKAANVDAVYFGGLYTEAALLIRQA 239 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPS 296 R G+ F+ + + IAG AAEGM +T P Q ++ L+A+ Sbjct: 240 REAGVTALFVSGDTLATDEFQAIAGPAAEGMTMTFSADARAKPEAQDLIARLRANGG-EP 298 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGV 356 G Y YAAVQ A A E+ GS + + L+ TV+GPL +D KGD D+ + Sbjct: 299 GAYTLYAYAAVQVWAKAAEKAGSTDGARVAATLRQGDYATVVGPLAFDAKGDRTSTDYVM 358 Query: 357 FQWHADG 363 ++W + G Sbjct: 359 YRWGSAG 365 >UniRef50_D1BLT9 Extracellular ligand-binding receptor n=4 Tax=Veillonellaceae RepID=D1BLT9_VEIPT Length = 382 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 87/380 (22%), Positives = 163/380 (42%), Gaps = 17/380 (4%) Query: 1 MKRNAKTIIAGMIALAI-------SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAI 53 +K+ A +AG++A+A + +A +++ K+A++ +G A +G+ GA A+ Sbjct: 6 LKKAAIFGLAGVMAVAAGCGGNKDAGSANSNEAKIALLTTTTGGAAAYGESIKAGAELAV 65 Query: 54 KDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIY 112 +INA K+ + D D +A+ NK++ D + VIG + S A + Sbjct: 66 SEINAD--ANAVKINLLVEDTKGDKNEAINAMNKVIAKDKVVAVIGPMLSGEMMAAGPVA 123 Query: 113 EDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH-DKQ 171 ++ + T +T G +I R A +S TA K +T+ + AI++ + Sbjct: 124 NKSKVVALGTSTTAEGITDIG-DYIFRNAVPESLAVDTAIKEAHKTLGFKTAAIMYSNNN 182 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 + + + L++ +V + + DFSA + ++++ D + Y E Sbjct: 183 DQMVSVNNTARKALESEGVQIVDTETFADKDTDFSAQLTKIQQAKPDVIVVASLYQEGAL 242 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ-DPANQGIVDALKA 290 ++++ R +G+ +G G + IAGDAA G++V P ++ D + A A Sbjct: 243 IMKKMREMGMNQPVVGSNGFNSPQFIKIAGDAANGVIVGTPWFPNKEDQKVKDFRKAYVA 302 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGS-DEPLALVKDLKAN-GANTVIGPLNWDEKGD 348 + Y AV TAL++ GS + + LK V G ++EK D Sbjct: 303 KYGKEPDQFAAQAYDAVYLYETALKKAGSTTDREKFREALKNIADFVGVTGQFKFNEKRD 362 Query: 349 LKGFDFGVFQWHADGSSTAA 368 + V Q +G A Sbjct: 363 P-SMEVQVLQIK-NGQFDAL 380 >UniRef50_C9R8F6 Extracellular ligand-binding receptor n=1 Tax=Ammonifex degensii KC4 RepID=C9R8F6_AMMDK Length = 397 Score = 320 bits (820), Expect = 8e-86, Method: Composition-based stats. Identities = 104/353 (29%), Positives = 170/353 (48%), Gaps = 11/353 (3%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A A ++K+ + +MSG + G + R A+ +INA+GGI G K+ DDA DP Sbjct: 36 APAGEVKLGCILSMSGQLGPMGKKMADAVRLAVDEINAQGGINGKKIKLYLEDDATDPVT 95 Query: 81 AVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY-QHIM 138 A+ A K+V +G+K +IG + SS+ + + ++MISP AT PELT + + +++ Sbjct: 96 ALNAAKKLVEVNGVKLLIGGMSSSAAKTMGPFLAERKVIMISPSATAPELTGQPWRKYLF 155 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 RT D QG A+ L+ +++ I+ YG GL ++ L+ A V+ F Sbjct: 156 RTCPSDIYQGKLMAQIALDQ-GAKKVVILAMDNTYGIGLGEEIKKALEGK-AQVLAFIKY 213 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL-KTQFMGPEGVGNASLS 257 +KD+ + + ++K N D V + GY + + +QA ++GL K +++G +GV + + Sbjct: 214 DPKKKDYRSELTQIKALNPDAVAHVGYNEDGRIIYQQALNLGLDKMKWIGCDGVYGSGMF 273 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQG---IVDALKADKKDPSGPYVWITYAAVQSLATAL 314 AAE M TM P NQ A KA + Y AV LA A Sbjct: 274 EN-PAAAEFMAKTMSGTRPASPENQAYEKFRQAYKAKFNTEPEVFCDTIYDAVNLLAKAC 332 Query: 315 ERTGSDEPLALVKDLKAN--GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 + GSD+ + + L V G + +D+ GD G F +++ G Sbjct: 333 AQAGSDDADKIREALLKIGQNYPGVSGSITFDQGGDRVGGYFEIWKVVKKGDK 385 >UniRef50_Q12GM8 Extracellular ligand-binding receptor n=1 Tax=Polaromonas sp. JS666 RepID=Q12GM8_POLSJ Length = 376 Score = 319 bits (819), Expect = 8e-86, Method: Composition-based stats. Identities = 79/360 (21%), Positives = 158/360 (43%), Gaps = 9/360 (2%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 + ++ +ALA S A +KV V ++G A +G + A+K N GG+ Sbjct: 8 KLQACVMFAGVALAFSAGAQ---VKVGVFVPLTGDAAGYGQSALEAIQLAVKQKNDAGGV 64 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 G K+ V DD P+Q+V VA ++ +DG+ ++G + S ++ A+ + G I Sbjct: 65 LGQKIELVVRDDGAKPEQSVTVAKRLATSDGVLVMLGSISSPASFAATQVALQTGTPQIV 124 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETV-KPQRIAIIHDKQQYGEGLARS 180 T +T +G + R D+ ++I+ +++ ++ +G G + Sbjct: 125 LLGTAQRITTQGNPWVFRGTIPDTKLSGDLVEFIIRKYPGKKKVGYLYVNDDFGRGGFEA 184 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + +++ +V + G+ DF++ + +++ EN D Y E + QA+ G Sbjct: 185 FKARAESSGLTIVAEEKYAPGDLDFTSQLTKIQSENPDVFVDWSRYTEGALVAIQAKRKG 244 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQ---GIVDALKADKKDPSG 297 + G EG+ + + +AGDA++GM+ +P N + +K Sbjct: 245 MTLPHFGSEGLSHPNFIKLAGDASDGMMYPVPFSMTTQSGNNIAVTLAQDIKKTYNKEIE 304 Query: 298 PYVWITYAAVQSLATALERTG-SDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGV 356 + Y A++++ A+E++G + + L LK+ ++ G +D KGD V Sbjct: 305 YTHALAYDAMRAVIFAIEKSGTTTDKLKFRDALKSLEFDSTRGKFKFDAKGDPTLLPSIV 364 >UniRef50_Q0AV49 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=4 Tax=Bacteria RepID=Q0AV49_SYNWW Length = 399 Score = 319 bits (819), Expect = 9e-86, Method: Composition-based stats. Identities = 88/379 (23%), Positives = 152/379 (40%), Gaps = 19/379 (5%) Query: 4 NAKTIIAGMIALAISH------------TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQ 51 ++A + S + + IK+ +GA +G +A +G G Sbjct: 12 LLCLLLAVAMLAGCSSNKEAAEGNKDADKSQEEVIKLGFLGATTGDVANYGIPGKKGMEM 71 Query: 52 AIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASD 110 AI D+NA+GGI G K+ GV D+ + + +A K + D + ++G C+ T+ A+D Sbjct: 72 AIDDLNAQGGILGKKVEGVYEDNKGENSEIALIATKYITRDKVVAMVGDPCTGLTKVAAD 131 Query: 111 IYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD- 169 I + +++ S GAT + + G ++ R LD P+ +++ + ++ AII Sbjct: 132 IAQKNKVVIFSAGATGTGVVEIG-DYVFRNTLLDQFAVPSVVDWMMNSKGWKKFAIITSL 190 Query: 170 KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEM 229 Y L Q+ +KA +V D I GE DF+A I +LK D + + GYY E Sbjct: 191 NNGYSTALTPVFQEAIKAKGGKIVNEDTINDGETDFTAQITKLKNTGADVLVFTGYYREA 250 Query: 230 GQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAE--GMLVTMPKRYDQDPANQGIVDA 287 + +A+ GL +G +G+ L + DA E + P + Sbjct: 251 ALLQNEAKKQGLDITLLGGDGLYGHDLIKLGKDAVEEKVIYYCGFSSDQPSPETDAFIKK 310 Query: 288 LKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEK 346 K+ + Y A+ LA A+ S +P +L V G + Sbjct: 311 YVEKYKEQPDMFSAQYYDAIMILAKAMTDAKSTDPSVFKDELAKLKDYPGVSGNTTFRAD 370 Query: 347 GDLKGFDFGVFQWHADGSS 365 + + DG Sbjct: 371 REPIKSPICLITVK-DGEF 388 >UniRef50_Q985D9 ABC transporter, binding protein n=2 Tax=Mesorhizobium RepID=Q985D9_RHILO Length = 399 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 141/372 (37%), Positives = 208/372 (55%), Gaps = 7/372 (1%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ + A + + A ADDI V+VVG M+G +A GD GA+ A INA G Sbjct: 27 MKKMSILSAAIFGLMMSAPVAFADDITVSVVGPMTGQLATIGDQFKQGAQAAADAINAAG 86 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G + DD CDPKQAV+VAN+I+ +G+K++ GH CS S+ PAS +Y + G LM+ Sbjct: 87 GVNGSMIKLDIEDDQCDPKQAVSVANRIIANGVKFIDGHACSGSSIPASAVYAEAGALMM 146 Query: 121 SPGATNPELTQR----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 SP ++NP LT G+ IMR D +QG +I + + + I+HDK YG+G Sbjct: 147 SPASSNPVLTDAAAKAGWPTIMRLYTRDDAQGAFIGPWIAKKYAGKNVVILHDKSAYGQG 206 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 +A +V+ + V++D I GEKD+SAL+ +LK D VY+GGY+PE G +LRQ+ Sbjct: 207 VADAVRATMNTGGLKEVYYDAINPGEKDYSALVTKLKDLKADVVYFGGYHPEAGLILRQS 266 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPS 296 LK Q + P+ + + +AG A EG + P P + V+ +KA Sbjct: 267 AEQNLKFQLIMPDSIASPEFWQVAGPAGEGTMFVFPSDPQAKPEAKAAVEKIKA-GGFVP 325 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIGPLNWDEKGDLKGFDFG 355 + +YA VQ+ A ++R GSD+P + + LK +TV+G + +DEKGDLK + Sbjct: 326 EGFTLFSYAVVQAFAEGIKRAGSDDPAKVAEALKNGTPISTVVGDVTFDEKGDLKNASYD 385 Query: 356 VFQWHADGSSTA 367 + QWH DG Sbjct: 386 INQWH-DGKYAP 396 >UniRef50_B7AA03 Extracellular ligand-binding receptor n=3 Tax=Thermaceae RepID=B7AA03_THEAQ Length = 389 Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 112/379 (29%), Positives = 180/379 (47%), Gaps = 13/379 (3%) Query: 2 KRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 R ++AG+ AL ++ A+ IK+A +SGP A G+ GA AI++ + Sbjct: 1 MRKVGFLVAGVAALGMAL-GQANVIKIASQSPLSGPQAALGEQIKLGAELAIEEAKPRFK 59 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G L V YDD +P VA AN+I+ND I V+GHL S P+S++Y ++M+ Sbjct: 60 ALGFDLQFVPYDDQANPDVGVANANRIINDPDILGVVGHLNSGVAIPSSEVYARVNLVMV 119 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 SP TNP +T R ++ R G D QGP A+Y +K + + IIHDK YG+GLA Sbjct: 120 SPANTNPRVTDRKLPNVNRICGRDDVQGPVGAEYAFNNLKVKNVFIIHDKTAYGQGLAEE 179 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKEN--IDFVYYGGYYPEMGQMLRQARS 238 + L+A V F G + +F +I +++ + +Y+GG Y ++G ++Q R Sbjct: 180 FKKRLEALGGKAVAFVGTEE-QSNFVPIINQIRGARPVPELIYFGGIYSQIGPFVKQLRE 238 Query: 239 VGLKTQFMGPEGVGNASLSNIAGD--AAEGMLVTMPKRYDQDPANQGIVDALKADKKDPS 296 G+KT+ MG +G+ ++ L +AG AA T+ P + + K Sbjct: 239 RGVKTRLMGGDGLDSSELVRLAGKENAAGTFYTTVAGPVSAFPKAKAVAQKFKQKYGKEI 298 Query: 297 GPYVWITYAAVQSLATALERT------GSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 + Y A + ALE + ++++ + G + +D+KGD K Sbjct: 299 EGFGIYAYDAANVILAALENAIKAAGGKKPTREQVSQEVRKVKMEGLTGTIEFDDKGDNK 358 Query: 351 GFDFGVFQWHADGSSTAAK 369 + V Q A G+ K Sbjct: 359 KAKYFVMQVAATGNWADNK 377 >UniRef50_B0UEJ1 Extracellular ligand-binding receptor n=3 Tax=Rhizobiales RepID=B0UEJ1_METS4 Length = 378 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 81/375 (21%), Positives = 157/375 (41%), Gaps = 11/375 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD---DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 M+ K + A + L A A +K+ + ++GP +++G G A+ +IN Sbjct: 1 MRSLMKGMTAAAMLLGAVAGAGAQDKSPVKLGAIEILTGPNSRYGVAIQRGFDLALAEIN 60 Query: 58 AKGGIKG-DKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDE 115 GG+ G L D A +QA+ A K++ D + ++G S+ A + + Sbjct: 61 RNGGVLGGRPLALAYEDSAGAKEQALNAARKLIGRDKVPLILGPTLSNEMFAAGPVANER 120 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH-DKQQYG 174 + ++ T +T G ++ RT+ ++ P + E +R+A+++ + + Sbjct: 121 KVPIVGTSTTANGITAIG-PYVFRTSLPEADVIPVTLRTAKEKFGVKRVAVMYGNDDAFT 179 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 + ++ GL+ + + + + DFSA + ++K N D + + Sbjct: 180 KSAYDVMKAGLEKLGIETLTTETFGSKDTDFSAQLTKIKGLNPDAIVLSALVEAASGIAL 239 Query: 235 QARSVGLKTQ--FMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKAD 291 QAR +G+ + +G G+ + L IAG AA+G +V P +DPANQ V A + Sbjct: 240 QARQLGIDPKVFIIGGNGLNSPKLGEIAGAAADGTIVGSPWFVGKKDPANQAFVAAFREK 299 Query: 292 K-KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLK 350 D + Y + +A A++ G+ + + L + V+GP ++ E D Sbjct: 300 YSGDSPDQFAAQAYDTLFIVAKAIDAAGAPDSEKIKDALIKVKHSGVMGPFSFSESRDPA 359 Query: 351 GFDFGVFQWHADGSS 365 V G Sbjct: 360 DTSGVVVLTMKGGKF 374 >UniRef50_B9JHQ3 ABC transporter substrate-binding protein n=7 Tax=Rhizobiales RepID=B9JHQ3_AGRRK Length = 397 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 158/377 (41%), Gaps = 17/377 (4%) Query: 3 RNAKTIIAGMIALA-----ISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 R A I ++AL IS A A+ IK+ +V MSGP A++G +GA A+K+ Sbjct: 7 RRALCISTALLALVTLAPNISGAARAEGAPIKLGIVAPMSGPNARYGAFSMHGAELAVKE 66 Query: 56 INAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYED 114 IN GG+ G K+ D P + V+ ++++ D + +VIG + SS T + ED Sbjct: 67 INDAGGVDGHKIELYNADSQGTPVEGVSATRRLIDEDEVGFVIGDVSSSVTLAMQPVVED 126 Query: 115 EGILMISPGATNPELTQR----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK 170 +L+++ ++NP++T G++ R D ++ AKY E + A++ Sbjct: 127 AEVLLLNAASSNPKITYGAGVGGFKWTYRNYPTDENRALIVAKYAAEQRGFTKFAVLSVD 186 Query: 171 QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 YG + L ++ D GE DF +++A+++ + G Sbjct: 187 SDYGRSAIEFTKKYLPQFKGEILSEDYYKEGEVDFRSVLAKIRDNGAQAIILYGLADTTP 246 Query: 231 QMLRQARSVGL--KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDA 287 + RQ +GL K +G A A EG + PA++ V+ Sbjct: 247 IIARQMIELGLAGKVTLIGNGEFNTEKTIKSAPTALEGAVEAAAWIPAWDSPASKAFVEK 306 Query: 288 LKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKG 347 A K+ + ++ + V LA A+ GS E + L + +G + +D+ Sbjct: 307 FTATYKEAPNNHAYVHWDTVHLLAQAIHEAGSIEQDKVRAALSKIKYKSPVGEVTFDD-H 365 Query: 348 DLKGFDFGVFQWHADGS 364 + + Q +G Sbjct: 366 NQARLPMILLQI-ENGK 381 >UniRef50_C7RS11 Extracellular ligand-binding receptor n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS11_9PROT Length = 365 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 139/342 (40%), Positives = 194/342 (56%), Gaps = 3/342 (0%) Query: 28 VAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANK 87 VA+ G M+G A GD GA AI DINAKGG+ G KL DDACDPKQAVAVAN Sbjct: 26 VAIAGPMTGQYASAGDQIKKGAEMAITDINAKGGVLGQKLKLEIGDDACDPKQAVAVANT 85 Query: 88 IVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQ 147 +VN I ++ GH CSSST PASD+Y + I M++ +TNP++T RG ++I AG D Q Sbjct: 86 MVNKKIVFMHGHWCSSSTIPASDVYNEAQIPMVT-VSTNPKVTDRGLKNIFAIAGRDDQQ 144 Query: 148 GPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSA 207 G A Y+ E K ++IA++ DK YG+GLA V ++A A + ITAGEKD+S Sbjct: 145 GQVAGAYLAENFKGKKIAVVDDKSAYGKGLADEVAKAMEAKGAKPALRESITAGEKDYSG 204 Query: 208 LIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGM 267 L+++LK ++ + +GGY+ E+ +LRQA+ GLK MG + + N+ L+ AG A + Sbjct: 205 LVSKLKSARVEVMAFGGYHTEVALILRQAQQAGLKLTIMGGDTMSNSELATAAGAQANNV 264 Query: 268 LVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVK 327 L T ++P+ +V K YV YAA Q A + S + L K Sbjct: 265 LFTFGPDARKNPSAAAVVKKFHDA-KIEPEGYVLYAYAAFQLFDQAAVKAKSTKYGDLEK 323 Query: 328 DLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 L++ +TVIG +++D G+ F V+QW DG K Sbjct: 324 ALRSGTFDTVIGKISFDANGNSSAPAFVVYQWK-DGKYDYVK 364 >UniRef50_Q1MR26 Branched chain amino acid ABC transporter, periplasmic amino acid-binding protein n=4 Tax=Proteobacteria RepID=Q1MR26_LAWIP Length = 379 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 79/379 (20%), Positives = 145/379 (38%), Gaps = 17/379 (4%) Query: 1 MKRNAKTIIAGMIAL---AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 MK I L AI + ++ IK+ V ++G A G +E +G + A +N Sbjct: 1 MKFAVMFGTILTIILLYGAIIPSHASEPIKIGVYLPLTGQNAYGGQLELDGIKLAHD-LN 59 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEG 116 + + D+ D +A ++++ D + +IG SS + ++ E Sbjct: 60 PV--VLNRPVQLFIVDNKSDKVEAANAVKRLIDQDKVCVIIGSYGSSLSLAGGEVAEQAK 117 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGE 175 I +I TNP +T +G ++ R +D QG A Y + + ++ A + D Y Sbjct: 118 IPVIGTSCTNPLVT-QGKKYYFRACFIDPYQGAAVATYATKNLGVKKAATLTDVSSDYSV 176 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GL + +V AG++DF+A + L + D ++ Y+ E +++Q Sbjct: 177 GLTAFFKKAFVHQGGEIVANLKYNAGDQDFTAQLMDLIAKKPDLLFVPSYFSEGAIIIKQ 236 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKR----YDQDPANQGIVDALKAD 291 A+ +G MG + + N I G + G L T A + Sbjct: 237 AKELGATFILMGADAMDNPDTLEIGGQSINGFLHTTFPYDIHMPHMSQEATKFTQAWRKT 296 Query: 292 KK-DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDL 349 + Y + A++R S P A+ L+ T +G L ++ D Sbjct: 297 FPYKDPNVNSALGYNCYNIVIDAIQRANSSNPEAITHALENTKNLPTALGILTINKHHDA 356 Query: 350 KGFDFGVFQWHADGSSTAA 368 + G+ Q+ +G Sbjct: 357 E-MPVGIIQYQ-NGKRVYL 373 >UniRef50_B8FGX7 Extracellular ligand-binding receptor n=3 Tax=Deltaproteobacteria RepID=B8FGX7_DESAA Length = 392 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 89/390 (22%), Positives = 166/390 (42%), Gaps = 23/390 (5%) Query: 1 MKRNAKTIIAGMI-ALAISHTAMA----DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 MKR+ II ++ ALA+S A A IK+ + ++G I + G+ A+ ++D Sbjct: 1 MKRSLSLIIGCLVIALALSPNAWAWGKAKTIKIGINAPITGDIPKVGEGTKYAAQMWLED 60 Query: 56 INAKGG--IKGDK--LVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASD 110 + A GG I G K + V D+ + AV K++ D + ++G S PA Sbjct: 61 VEAAGGLEIDGKKYKVELVIEDNEAKAESAVKANTKMITQDEVIAIVGPQSSKQAVPAGG 120 Query: 111 IYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD- 169 + D MI+P +TNP+ T + ++ R LD QGP A +I E + A+++D Sbjct: 121 VANDWATPMITPWSTNPDST-KDRPYVFRGCFLDPFQGPVVANFITEEFGATKAAVLYDV 179 Query: 170 KQQYGEGLARSVQDGLKAANAN--VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYP 227 Y +GLA + + + VV F+ T + DFS+ + ++ + + ++ YY Sbjct: 180 ASDYPKGLAEFFKIAWEKIHGPGSVVAFESFTTKDADFSSQLTKIIQSGAEVIFTPQYYN 239 Query: 228 EMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPA-NQGIVD 286 E+ +++QA +G + +G + G+A N+ G G+ + + +D Sbjct: 240 EVALIVQQAHELGWQKPIVGSDSWGSAETVNLCGPDCYGLFFSSHYAAAGATGSTKAFID 299 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSD------EPLALVKDLKAN-GANTVIG 339 + +T+ ++ + A+E G + A+ L + G Sbjct: 300 RYEKKYGYVPDDVAALTWDSLGIVQKAIESMGKLTGNIEKDRTAVRNALAKVKDFAGITG 359 Query: 340 PLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + + E GD + + + G K Sbjct: 360 KMTFTEDGDPIKCAV-IVKINDKGEFEFYK 388 >UniRef50_A9IHL6 Putative binding-protein-dependent transport protein n=4 Tax=Bordetella RepID=A9IHL6_BORPD Length = 382 Score = 316 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 94/378 (24%), Positives = 170/378 (44%), Gaps = 12/378 (3%) Query: 2 KRNAKTIIAGMIALA-------ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIK 54 + A IA + LA + +++ ++ +++G A +GD G R AI Sbjct: 7 RTLAVASIAAAVTLAGCGQKEEAAAATGGTPLRLGIIESITGAAASYGDAHNKGTRLAID 66 Query: 55 DINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYE 113 +IN GG+ G + DD DP + A K++ + ++G S T S E Sbjct: 67 EINKAGGVNGLPIEVHAEDDKSDPATGINAAKKLITQRKVDAIVGSDASLVTIAFSKENE 126 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 + +++ A +P +T++G+++ R D+ A +Y ++ K +IA + + Y Sbjct: 127 KYKVPLVNGMAGSPTITEQGFKYTWRIKITDNQLDTKAIEYYIQDKKAHKIAFLAENSDY 186 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+ ++ D + A VV ++ GE DF A + ++ + D ++ GYY E + Sbjct: 187 GKPPTKAAADRARELGAEVVAYEEYNRGETDFKAQLTNIRDQAPDVLFVHGYYTEGSIIA 246 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADK 292 RQ R +G+KTQ + EG G A +AGDAAEG + D ++ A +A Sbjct: 247 RQIRELGIKTQLIVNEGQGVAKFQELAGDAAEGAVFPTTWLPGLSDERSKQFETAYRARY 306 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKG 351 G + +Y AV ++ A + G + L G +T++GP+++D+K G Sbjct: 307 NTEPGAFAAGSYEAVYTVVEAARKGGGTSAEQIQAGLAQLQGFDTLLGPVHFDQKNQNDG 366 Query: 352 FDFGVFQWHADGSSTAAK 369 + +H DG + Sbjct: 367 -AIKLAHFH-DGKIVPMQ 382 >UniRef50_A6T359 ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T359_JANMA Length = 376 Score = 316 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 101/376 (26%), Positives = 170/376 (45%), Gaps = 8/376 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMA-DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK ++ + + + A +K+ + ++GP A +G NGAR A+ ++N K Sbjct: 1 MKSSSFIFPILIASASTLVQAQEVQTVKIGLAAPLTGPQAFYGKDSQNGARLAVDELNEK 60 Query: 60 GGIKGDK---LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 + G K + DDA DPKQ AVA + + + VIGH S + PA+ IY G Sbjct: 61 KIVVGGKQLRFELLSEDDAADPKQGAAVAQRFCDLHVNAVIGHTNSGTAIPAARIYHQCG 120 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 + +SP AT+PELT+ Y R DS+ A Y + +K + IA++ D+ YG+G Sbjct: 121 LPNLSPSATSPELTKSAYNTTFRMLANDSTLAQALAAYTVNVLKLKTIAVVDDRSAYGQG 180 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + + L+ VV DFSA++ +K N D V++GG P+ MLRQ Sbjct: 181 LADAFRTALRNTPVQVVTQQYTNDKAVDFSAILTAIKGRNPDAVFFGGMDPQGSAMLRQM 240 Query: 237 RSVGLK-TQFMGPEGVGNASLSNIA-GDAAEGMLVTMPK--RYDQDPANQGIVDALKADK 292 +GL +F+G +G+ + G + LV D+ A++ Sbjct: 241 EQLGLTRQKFIGGDGICTQGMEQRTEGMKIQDNLVCAHSGIALDRTTASRAWKKRYDEKF 300 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGF 352 + +Y AV ++A A++ S EP + + V+ + +D +G++K Sbjct: 301 PGQFQMHGPYSYDAVLAVAKAMQAANSVEPQKYLPAMGKVHFAGVMSNVQFDARGEIKNP 360 Query: 353 DFGVFQWHADGSSTAA 368 ++ + A Sbjct: 361 TISIYTYQDGKRRLAN 376 >UniRef50_Q13IR8 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=21 Tax=Proteobacteria RepID=Q13IR8_BURXL Length = 399 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 86/356 (24%), Positives = 144/356 (40%), Gaps = 6/356 (1%) Query: 15 LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDD 74 LA + +D V V G +SG AQ+G+ G A++ IN GGI G L D Sbjct: 35 LAHAAGTSSDPYWVGVTGPLSGQDAQYGEQWKRGFDLALEQINGSGGIDGHPLNYDFEDS 94 Query: 75 ACDPKQAVAVANKIVNDGIKYV-IGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRG 133 DP+QAV +A K V+D + +G L S ++ AS +Y+ G++ ++P+ T +G Sbjct: 95 RSDPRQAVQIAQKFVDDKRILLELGDLSSGASMAASPVYQRGGLVQFGFTNSHPDFT-KG 153 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 ++ TA + + P A Y + ++IA+++ +G + A VV Sbjct: 154 GDYMWSTAISQAEEQPMLAHYATTGLGFKKIAVLYLNTDWGRTSKDIFAKAATSDGAQVV 213 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 +G EKDF A + R++ N D + YY + Q++RQAR+ G++ V + Sbjct: 214 AAEGYQPNEKDFRATLTRIRSANPDSIVLISYYSDGAQIVRQARAAGVREPIAAVGSVYS 273 Query: 254 ASLSNIAGDAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 + G A G+ + D P Q V +A + Y A+ Sbjct: 274 PKFLELGGAAVNGVYTESNFFPGDPRPEVQSFVTRYRAKYGGDPDTFAARAYDAMILAGE 333 Query: 313 ALERTGSDEPLALVKDLKANG--ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 + R G A+ + + G +D + DG Sbjct: 334 VIRRYG-ANRSAVRDGFAKIDNVPSVIFGKFKFDPQTRRVAGAKNRELVVKDGKFA 388 >UniRef50_D2AV85 ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AV85_STRRD Length = 389 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 166/351 (47%), Gaps = 5/351 (1%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 D I + ++ SG A G N A+ A+ +INAKGG+ G KL DDACD Sbjct: 35 AATADDPIVLGMLIPQSGSEAAIGPYMSNAAQLALDEINAKGGVLGRKLELKTADDACDA 94 Query: 79 KQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 + A A ANK+V +G+ +G CS +T P I+ I MI P A + EL + +H+ Sbjct: 95 QSAAAGANKLVTEGVDISVGGYCSGATLPTLPIFGKANIPMIIPAANSQELVDQKLKHVF 154 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKA-ANANVVFFDG 197 G S Q A K+I + + + ++HD Y + +A + L A A A V + Sbjct: 155 LINGTGSQQAGAAEKWIAKQ-DAKSVVLMHDNTSYSKDIALRTKALLDAPAGAEAVLVET 213 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 +T E D+SA I + + DFVY+ GY+ E G + RQ R G K M +G + L Sbjct: 214 VTPKESDYSANITNVLAKKPDFVYWTGYFQEGGLIARQLRQAGYKGSIMVGDGSVSPKLV 273 Query: 258 NIAG-DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 IAG +AAEG+ TM + D +G + A K GPY Y AV+ A A+ + Sbjct: 274 EIAGAEAAEGLYATMTQTPDTLEGAEGWIAAYKKKYNADPGPYSNQAYDAVRLAAEAVTK 333 Query: 317 TGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 G + ++ L+A + GPL + + L F + DG T Sbjct: 334 AGGTDGAKVISALEAIDGFSMFSGPLKFTPEHTLSNGGFQIL-VVKDGKIT 383 >UniRef50_D2L0U6 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0U6_9DELT Length = 418 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 85/369 (23%), Positives = 142/369 (38%), Gaps = 18/369 (4%) Query: 11 GMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK---GDKL 67 G + A IK+ V +SGP A G A+++INA GGIK G KL Sbjct: 22 GAVLAVSPAVAADKTIKIGNVEPLSGPSASVGVQGKQAREMAVEEINAAGGIKSLGGAKL 81 Query: 68 VGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATN 126 V D DP V +++N + + + G S+ T PA+ + E GI + P A Sbjct: 82 ELVYADSKSDPTVGVTETERLINTEKVNLMTGCWNSAVTYPATQVAERYGIPFVVPVAVR 141 Query: 127 PELTQRGYQHIMRTAGLDSSQGPTAAKYILE-----TVKPQRIAIIHDKQQYGEGLARSV 181 +T+RG++++ R A DS +++ + VK + IA + + +G G A Sbjct: 142 DTITERGFKNVFRIAAKDSWWVRDQFRFLKDMQEETGVKLKTIAFVFENGDWGTGFAEKW 201 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 ++ K +V + + D + ++ +LK N D V + + + + Sbjct: 202 RELAKKDGYQIVLDEPYPSTATDLTPVVTKLKSANPDIVLLVSNAADAILLTNNMTEMQV 261 Query: 242 KTQFM--GPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGP 298 + + + G + G A G+ + D + P + K Sbjct: 262 RPKVVLASGGGHADPKFLENTGTNALGLFDEVEWNTDVNKPGAKETNAKFKKKYGYDLTG 321 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPL------NWDEKGDLKGF 352 YAAV +A ALER S +P + L T G + +DE G K Sbjct: 322 ESVDAYAAVYVIADALERAASTDPAKIRDALATTNLTTGPGMIVSYDGVQFDETGQNKNA 381 Query: 353 DFGVFQWHA 361 + Q Sbjct: 382 GIVIVQVAD 390 >UniRef50_B8IZP5 Extracellular ligand-binding receptor n=9 Tax=Bacteria RepID=B8IZP5_DESDA Length = 381 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 101/381 (26%), Positives = 164/381 (43%), Gaps = 19/381 (4%) Query: 1 MKRNAKTIIAGMIALAIS-----HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 MK +AL A A IK+ V ++G A G +E G R A K+ Sbjct: 1 MKMGKFFAALAGLALTFGFAGQALAADAAPIKIGVYLPLTGQNAFGGQLELEGVRLAHKE 60 Query: 56 INAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYED 114 + + G + V D+ D +A ++V D + +IG SS +++ E Sbjct: 61 M---PTVLGRPVDLVVVDNKSDKVEAANAVKRLVERDKVVALIGSYGSSLAMSGAEVAEK 117 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQY 173 + I TNP +T +G ++ R +D QG AA Y E + ++ A++ D Y Sbjct: 118 AKVPGIGTSCTNPLVT-QGKKYYFRACFIDPYQGAAAATYARENLGFKKAAVLMDMTNDY 176 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 GLA K VV ++G++DF+A + L + D V+ Y+ E ++ Sbjct: 177 AVGLASFFSRSFKKQGGEVVGTLKYSSGDQDFTAQLTELISKQPDIVFMPAYFAEGAIIM 236 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGML-VTMPKRY---DQDPANQGIVDALK 289 +QAR +G K + MG + + N + G AAEG L T P + A Q DA K Sbjct: 237 KQARELGAKFRLMGADAMDNPDTLKLGGKAAEGFLHTTFPYDPAMTNMSEAAQRFTDAWK 296 Query: 290 ADKKD-PSGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKG 347 A D + + Y + + A++R S EP A+ K L + +T +G L+ +E Sbjct: 297 ATYPDKETNVNGALGYNSYFIIIDAIKRANSAEPQAIAKALGETKDLSTALGVLSINESH 356 Query: 348 DLKGFDFGVFQWHADGSSTAA 368 D + G+ ++ DG Sbjct: 357 DAE-MPVGIIEYK-DGKRVYV 375 >UniRef50_B8GBD0 Extracellular ligand-binding receptor n=5 Tax=Chloroflexaceae RepID=B8GBD0_CHLAD Length = 814 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 105/343 (30%), Positives = 161/343 (46%), Gaps = 9/343 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 IK+A G +SG A G N AI++IN++ G K V +DD P+ A Sbjct: 453 TIKIATQGPLSGGQAALGTGMKNAVELAIEEINSQLSALGVKFEVVPFDDQAKPEVGSAN 512 Query: 85 ANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A IV+D I V+GHL S A Y++ + M+SP TNP +T+ GY+ R G Sbjct: 513 AKNIVSDADILCVVGHLNSGVALAALPDYKNARLAMVSPANTNPNITEGGYEVAFRVVGR 572 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 D QG A K+ E +K + + IIHD YG+G+A + +A V+ F+G Sbjct: 573 DDVQGSVAEKFAREELKIKSVYIIHDTTAYGQGVAEFFRKAAEANGIQVLGFEGTEEK-S 631 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 DFSA++ + N D +++GG Y + G RQAR G+ QFMGP+G+ + L+ +AGDA Sbjct: 632 DFSAILTPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGLDSEELAKLAGDA 691 Query: 264 AEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQ-----SLATALERT 317 + M T Q P +A + + P+ Y A L+ A+ Sbjct: 692 VDKMYYTSVAAPVSQFPKAAKYAADYQAAYGEGAPPFSAQAYDAANICAAGILSAAITAG 751 Query: 318 GSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQW 359 G +++ ++ + G ++ KGD + V Q Sbjct: 752 GKPTRAQVLEAIRNLPPFPGITGTFKFNAKGDPTVATYFVLQV 794 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 104/343 (30%), Positives = 157/343 (45%), Gaps = 9/343 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 IK+A G +SG A G N A A+K ++ G ++ +DD P+ A Sbjct: 59 VIKIATQGPLSGGQAALGTGMKNAAELAVKQLSGPLAELGFRVELAPFDDQAKPEVGSAN 118 Query: 85 ANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A IV+D I V+GHL S A Y++ + M+SP TNP +T+ GY+ R G Sbjct: 119 AKNIVSDADILCVVGHLNSGVALAALPDYKNARLAMVSPANTNPNITEGGYEVAFRVVGR 178 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 D QG A K+ E +K + + IIHD YG+G+A + +A V+ F+G Sbjct: 179 DDVQGSVAEKFAREELKIKSVYIIHDTTAYGQGVAEFFRKAAEANGIQVLGFEGTEEK-S 237 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 DFSA++ + N D +++GG Y + G RQAR G+ QFMGP+G+ + L+ +AGDA Sbjct: 238 DFSAILTPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGLDSEELAKLAGDA 297 Query: 264 AEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLA-----TALERT 317 + M T Q P KA + + P+ Y A A Sbjct: 298 VDKMYYTSVAAPVSQFPDAAKYAADYKAAYGEDAPPFSAQAYDATGICLTAIANAAKAAG 357 Query: 318 GSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQW 359 G ++ ++K + G ++EKGD + V Q Sbjct: 358 GKPTREQVLNEIKKLSAYKGITGTYTFNEKGDPTVATYFVLQV 400 >UniRef50_A9FT17 Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FT17_SORC5 Length = 398 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 89/388 (22%), Positives = 159/388 (40%), Gaps = 25/388 (6%) Query: 2 KRNAKTIIAGMIALAI-----------SHTAMAD------DIKVAVVGAMSGPIAQWGDM 44 +R +IAG +AL+ S A+ + KV ++SG +G Sbjct: 4 RRGLVKMIAGALALSAMTLGCDKKSEGSAGNAAEHAKDDAEWKVGAYFSLSGEETAFGVD 63 Query: 45 EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSS 103 AI +IN GG+KG + + D+ P++A ++++ D + ++G + SS Sbjct: 64 SKEAIDLAIDEINKAGGVKGKPIHVLYEDNKSKPEEATNKVLQLIDRDHVLALLGEVASS 123 Query: 104 STQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR 163 ++ + + + MI+P +TNP++T+ G + R D QG A++I+ T+ ++ Sbjct: 124 RSRAGGIVANKKKVPMITPSSTNPDVTKVG-PFVFRACFTDDVQGQMGAQFIVNTLGKKK 182 Query: 164 IAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYY 222 + + Y GLA+ +D +K +V E +F+ I LK N + +Y Sbjct: 183 VGLFFASDDLYSSGLAKEFRDEVKRLGGEIVMEKSFLKKETNFTTYINELKSANPEMIYA 242 Query: 223 GGYYPEMGQMLRQARSVGLKTQ-FMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPA 280 YY M + RQA++ G+ F+G +G L A + +G T D P Sbjct: 243 PIYYTSMAPVARQAKAAGVPGSMFVGSDGWDANELLRDAAEELDGAYFTNHYAPDVPWPN 302 Query: 281 NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIG 339 +Q V K Y A + LA A+ R + P + ++ G G Sbjct: 303 SQAFVKKYKDRYNRTPSSIAAQAYDAARLLADAMGRAKAMTPDDIRAAIQDTKGFQGATG 362 Query: 340 PLNWDEKGDLKGFDFGVFQWHADGSSTA 367 ++ D + + V D T Sbjct: 363 VISIDAERNANKPVVIVR--IKDKQFTY 388 >UniRef50_A1WEQ0 Extracellular ligand-binding receptor n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEQ0_VEREI Length = 382 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 84/362 (23%), Positives = 155/362 (42%), Gaps = 14/362 (3%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S D ++ V+ ++GP A G G R A ++ NA+GG+KG K+ E DD Sbjct: 21 SSALAQDTVRFGVLLPLTGPAALSGTSIVEGMRLAAEEANAQGGVKGKKVQLFEEDDEGL 80 Query: 78 PKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ---RG 133 +AV A ++V + + + G S++ A+ + + + ++S G+T+ T G Sbjct: 81 TTKAVTGARRLVESNKVIGISGSYISAAAIAATKVAREFKVPVVSGGSTSVSATDANTPG 140 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 R QG +A+ I++ +K +++A+I++ YG LA ++ + VV Sbjct: 141 DPWFFRAFPGSIEQGEQSARDIVQKLKAKKVAVIYENSPYGMSLAEQMRKDIPRFGGQVV 200 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 + E+DF +++ +++ + +Y G Q++RQA VGLKTQ +G + + Sbjct: 201 AEEIYNTDERDFYSVLTKVRARQPEAIYLAGLMDAGVQVIRQASEVGLKTQLVGSGSMMS 260 Query: 254 ASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 L + G A+EG V+ + Q + K + + Y ++ L Sbjct: 261 DKLIQLTGHASEGFAVSSMFEPSTPNEFGQKFTRMFRERYKKEPDVFTALGYDSMHLLIE 320 Query: 313 ALERTGSDEPLALVKDLKAN-GANTVIGP----LNWDEKGDLKGFDFGV-FQWHADGSST 366 A R + + +L V GP + +D KG G F + +G Sbjct: 321 AARRAAKLDGEQVRAELIKMSDVPLVQGPANTMVKFDAKG---GSTFRIGLAIVRNGKRV 377 Query: 367 AA 368 Sbjct: 378 WL 379 >UniRef50_B4SCM8 Extracellular ligand-binding receptor n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SCM8_PELPB Length = 373 Score = 313 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 82/372 (22%), Positives = 152/372 (40%), Gaps = 13/372 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMA--DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M++ I +I+ + + + I + ++G A +G G AI++IN Sbjct: 1 MRKFKVLAIIIIISAYLFACGNSKKETINIGCSLPLTGEGANYGRSVKEGVDLAIEEINQ 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 + L + DD DP++ V NK++ D + +IG SS T + I + Sbjct: 61 S-EMFDLPLKVIYEDDKMDPREGVNAINKLITADNVPIIIGPFGSSITLAVAPIANKNKV 119 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 +++ AT + G +I R +S QG A + ++ ++ AII+ YG L Sbjct: 120 VLLGASATADNIKDAG-DYIFRITPPNSKQGNDVASFCFNSLNSKKAAIIYQTNDYGTTL 178 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 + + V+ +G+ G KDF I ++K + +D V++ + E G L+Q++ Sbjct: 179 KTAFESEYLKLGGEVLIVEGVDLGNKDFKTQILKIKSKQVDVVFFPLHVAESGNFLKQSK 238 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD--QDPANQGIVDALKADKKDP 295 +GL +F+ +G L +AG+AAEG T D K Sbjct: 239 ELGLNVKFISCDGAMVDDLLKLAGNAAEGTYYTSLALAYGMNDSLINSFNTNFKKKYNKE 298 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG----ANTVIGPLNWDEKGDLKG 351 Y Y LA AL++ + + + L + N + G ++D G++ Sbjct: 299 PDVYAAYYYEVTYILAHALKKANGNIGQ-IKEILYSINGENAYNGITGLTSFDTYGEVDK 357 Query: 352 FDFGVFQWHADG 363 F ++ + Sbjct: 358 S-FSIYVVSNNK 368 >UniRef50_Q2RSC4 Extracellular ligand-binding receptor n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RSC4_RHORT Length = 370 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 212/369 (57%), Gaps = 1/369 (0%) Query: 1 MKRNAKTIIAGMI-ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M+ K + + + ALAIS DI V + ++G IA G+ GA AI N Sbjct: 1 MRTLHKAVFSVTVSALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKA 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GG+KG+ + DDACDPKQ VAVANK V+ G++ VIGH+C+ T AS +Y +E I M Sbjct: 61 GGLKGETITLQVEDDACDPKQGVAVANKFVSAGVEAVIGHMCTGPTMAASTVYSEEEIPM 120 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 ++ AT P+LT+RG ++ R G D QG A K I E Q AI+HDKQ YG GLA Sbjct: 121 VTASATGPDLTERGLTNVFRATGRDDQQGTIAGKMIAERFADQTTAIVHDKQAYGRGLAE 180 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + AA F I GE+DFSALI+RLK+ + VYYGGYY ++GQ++RQ+R+ Sbjct: 181 EAKKAMNAAGKEEALFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQ 240 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPY 299 GL F+G +G+ ++ I G+A EG L T +PA + V+A KAD K + + Sbjct: 241 GLDAVFVGGDGLSSSEFWAITGEAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNF 300 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 + YAA Q L A+ + GS +P A+ K L+ N TV GP+++D KGDL F +QW Sbjct: 301 AYYYYAAAQVLTQAMAKAGSADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQW 360 Query: 360 HADGSSTAA 368 A AA Sbjct: 361 SAGKPKPAA 369 >UniRef50_Q3JSD7 Outative extracellular ligand binding protein n=35 Tax=pseudomallei group RepID=Q3JSD7_BURP1 Length = 405 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 101/362 (27%), Positives = 169/362 (46%), Gaps = 5/362 (1%) Query: 5 AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIK 63 ++ + A+A A + +++ V ++GP+A G NGA+ A+ ++N I Sbjct: 38 RMGCLSLLAAVAFDAHAQSSVVRIGVAMPLTGPVAHLGKDVQNGAQLAVDELNRAPPTID 97 Query: 64 GDKLV--GVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 G + V DD DP+QAV VA ++V+ + V+G L S T A+ +Y GI I+ Sbjct: 98 GKPVKFVLVVEDDQGDPRQAVQVAQRLVDARVAGVVGDLNSGPTIVAAKVYAAAGIAQIA 157 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 P AT+P TQ GY+ R D+ QG + A + K + IA+I D+ YG+GL Sbjct: 158 PAATHPAYTQLGYKTAFRLMATDNQQGASLAGLAAKLAKGRPIALIDDRGAYGQGLIDQT 217 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + L+A+ + D T +F++++ R+K + + YGG + G M+RQ +++G+ Sbjct: 218 EKTLRASGVTRIIRDYTTDTAVNFASILTRVKGAHAAVIVYGGADAQAGPMVRQMKALGI 277 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYV 300 F+G +GV + ++ A EG T + +A + Sbjct: 278 DAAFVGSDGVCTGQWTALSSGANEGQFCTQAGDPRARMAGYAAFERRFEARYGKVI-VFA 336 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 Y AV LA A+ R S EP AL+ L + VIG + + +GD V++ Sbjct: 337 PYGYDAVMLLADAMRRANSTEPAALLGALATTRYDGVIGRIRFSPQGDNLNGAVTVYRVQ 396 Query: 361 AD 362 Sbjct: 397 RG 398 >UniRef50_C0CTG8 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTG8_9CLOT Length = 392 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 83/380 (21%), Positives = 161/380 (42%), Gaps = 21/380 (5%) Query: 1 MKRNAKTIIA--------GMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 M+R K I A +A +D I + +G ++G A WG++E N + Sbjct: 1 MRRKFKRIAAAAMATAMALSVAACGGSKKDSDKIILGYMGPLTGESALWGEVESNTLKML 60 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANK-IVNDGIKYVIGHLCSSSTQPASDI 111 +++ NA GGI G ++ YD+ D + A K + NDG+ IG SS +++ Sbjct: 61 VEETNANGGIIGKQIELKIYDNRGDAVETTNAARKALQNDGVVAFIGPDSSSGAIALAEV 120 Query: 112 YEDEGILMISPGATNPELTQR-----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAI 166 E+ + I+ TN ++TQR + R D G Y + + Q++AI Sbjct: 121 CEEYKVPHITTTGTNYKVTQREEDGSVRPYAFRICLSDPQLGDIMGGYAKDKLGYQKVAI 180 Query: 167 IHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKEN-IDFVYYGG 224 +++ +Y G+ ++ + +A V + G+ DF A ++++K++ D + Sbjct: 181 LYEISSEYSLGITQNFTNSFEAKGGQVTITEAYKTGDVDFRAQLSKIKEKGDFDALMIPA 240 Query: 225 YYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGI 284 Y E+G + +QARS+G++ F+G + L IA D + + + D + Q Sbjct: 241 NYKEVGLIAKQARSLGIEVPFLGVDAWMMQDLFEIAKDEVQDAVFPCAMDVN-DESLQEF 299 Query: 285 VDALKADKKDPSG---PYVWITYAAVQSLATALERTGSDEPLALVKDLK-ANGANTVIGP 340 +A + ++ Y + + A+E G +P + ++ A + Sbjct: 300 KNAFQEKWNMDPDKGGTDAYLAYDCFELVKYAIETAGEADPQKIRDAMENAKDVQCLTSV 359 Query: 341 LNWDEKGDLKGFDFGVFQWH 360 ++ D + +FQ Sbjct: 360 ISMDPQTHNPVRTASIFQIQ 379 >UniRef50_C9LQP4 Putative branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQP4_9FIRM Length = 386 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 79/371 (21%), Positives = 150/371 (40%), Gaps = 14/371 (3%) Query: 6 KTIIAGMIALAISHTAMADD----IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 AG+ A TA +K+ + A++G A +G + G R A+++IN KG Sbjct: 17 AIAAAGLTACGGIKTAADSPSKGGVKIGFIAALTGGAAAYGKSQEEGIRMAVEEINQKGA 76 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 I + D P A+ V +++ +IG + S+ + A I ++ I + Sbjct: 77 I---PIELFVEDSKGSPSDAMNVTKRLIQKKAAVIIGPMTSNEAKAAGPIMQNAKIPSLE 133 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARS 180 T +T+ G +I R + +S P AK + + AI++ + + Sbjct: 134 ISVTAEGITEIG-DYIFRNSVPESMNIPQTAKKTHRLLGYETAAILYAHDNEQHVTAQKY 192 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 + L+ +V + + + ++SA + ++ D V YY E ++L++ R +G Sbjct: 193 FRKTLEEEGVKIVDVETFGSKDSEYSAQLTNIENAKPDVVIVCSYYQEGVRILKKMREMG 252 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN-QGIVDALKADKKDPSGPY 299 + +G G + L +AG AA+ + V+ +D A + V+ + Sbjct: 253 MNQPVLGDNGFVSPELGKMAGAAADNVYVSSMWSAARDTAATKTFVENYTKKYGHAPDQF 312 Query: 300 VWITYAAVQSLATALERTGS-DEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVF 357 Y V A++R GS + + + G N V G ++D+K D D + Sbjct: 313 AAAAYDGVYMAMDAVQRAGSVTDTRKIRDAMAEMKGFNGVCGTFSFDDKRDPVV-DLVLL 371 Query: 358 QWHADGSSTAA 368 + DG A Sbjct: 372 KM-EDGVFLAV 381 >UniRef50_C0D1T2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D1T2_9CLOT Length = 407 Score = 310 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 87/400 (21%), Positives = 159/400 (39%), Gaps = 36/400 (9%) Query: 2 KRNAKTIIAGMIALAISHTAMAD-----------------------------DIKVAVVG 32 KR A + M+A + + A+ I++ V Sbjct: 3 KRIAVLLAVAMMASVTAGCSGAEAKAPAAGTETSGGQTGENASQGAGESGENPIRIGVAA 62 Query: 33 AMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND- 91 ++G A++G + A + +NA GG+KG + V D D K++ VA + Sbjct: 63 PITGNSAEYGKGFQVATQMAAEVVNAAGGVKGRPIEMVVKDSKGDAKESADVARIFCEEE 122 Query: 92 GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTA 151 I VIG SSS ++ IY+++G++ ISP A++P+ + G ++ G +GP Sbjct: 123 DIVAVIGDFSSSSCMASAPIYQEKGLVQISPSASHPDFAKMG-DYMFGVVGRQDDEGPFM 181 Query: 152 AKYILETV-KPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIA 210 AKY+ + + + +I +G + + + + + V + GEKDF+A+I+ Sbjct: 182 AKYMAKKYIGAESVGVIFMNNDWGVVTSENFKQACEESGVTVTATESFIEGEKDFNAVIS 241 Query: 211 RLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVT 270 ++++ + D + Y E + +Q + G Q MG + + L + G EG++ Sbjct: 242 KVRQTDPDALCLITQYNEAAIISKQVKQAGWDVQIMGAGAMYSDQLIQLGGADVEGLIAE 301 Query: 271 MPK-RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL 329 P + DP + Y +A A+ R A+ L Sbjct: 302 SPFIIEESDPKAMEFAREFEKRAGFKPNIQAASAYDTALLVADAIGRAEEVSRSAVRDAL 361 Query: 330 KANG-ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 A + GP+ + E GD+ + V DG A Sbjct: 362 AATDNFMGITGPITFTEDGDVHRK-YRVMAIQ-DGKWVAL 399 >UniRef50_Q2RMX3 Extracellular ligand-binding receptor n=2 Tax=Bacteria RepID=Q2RMX3_RHORT Length = 392 Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats. Identities = 87/376 (23%), Positives = 155/376 (41%), Gaps = 9/376 (2%) Query: 3 RNAKTIIAGMIALAISHTAM-ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 R A +A+ + A AD IK+ ++G A NGA+ AI +NA GG Sbjct: 8 RAGLLAGAFALAIGFAGPAASADPIKIGGAFNLTGGQASLDGPAKNGAQLAIDTLNAAGG 67 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 + G L V YD DP ++ ++++N D + +IG S + G+ I Sbjct: 68 VNGTPLELVVYDGKTDPAVVASLGSQLINSDKVSAIIGFSDSDPVLALGPNAQKAGVPFI 127 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLAR 179 + GAT+P+L + + D++Q A + ++ +K + + ++ D +Y L++ Sbjct: 128 AVGATSPKLPDQIGDTMFLACFGDNTQAAVGASFAIDDLKAKSVYVLEDTANEYATLLSK 187 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKE--NIDFVYYGGYYPEMGQMLRQAR 237 ++ + V+ D G+K F+A I ++K D +Y +G ++RQ R Sbjct: 188 YFRETFEHLGGKVIGRDTYRTGDKSFTAQITKIKAAAEKPDILYIAATPDSIGLVVRQVR 247 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN--QGIVDALKADKKDP 295 GLK +G +G L + G +A + T + DA + Sbjct: 248 QAGLKLPIVGGDGYDTPLLLEVGGASANNVYFTTHSFVSDSAPGPMKTFFDAYGKAYGNA 307 Query: 296 S-GPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFD 353 + + Y V +A A++R GS +P A+ K L + V G + + E + Sbjct: 308 PENAFAALGYDTVMLVADAIKRAGSGDPAAIRKALTETKDLAGVTGAVTFAEGSRVPVKS 367 Query: 354 FGVFQWHADGSSTAAK 369 V AA+ Sbjct: 368 VTVIGVKDKALYKAAE 383 >UniRef50_C5EHL3 Extracellular ligand-binding receptor n=4 Tax=Clostridiales RepID=C5EHL3_9FIRM Length = 386 Score = 309 bits (794), Expect = 8e-83, Method: Composition-based stats. Identities = 87/377 (23%), Positives = 153/377 (40%), Gaps = 17/377 (4%) Query: 2 KRNAKTIIAGMIALAISHT---AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 K A T+ A ++A +++ A IK+ V +G G E G R A K+++ Sbjct: 5 KIMAVTMAACLVAGSLAGCGKKAEEKVIKIGVFEPTTGENGGGGFQEVLGIRYA-KEMHP 63 Query: 59 KGGIKG--DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 I G K+ VE D+ D +AV A K+V++ + V+G S + A I+ D Sbjct: 64 TVTINGEEYKVELVEVDNKSDKTEAVNAAQKLVSEKVSVVLGSYGSGVSIAAGQIFADAK 123 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGE 175 I I TNP++T+ G R +D QG A Y + + A+I Y Sbjct: 124 IPAIGCSCTNPQVTE-GNDFYFRVCFIDPFQGTVMANYAFQN-GAKSAAVITQLGDDYSS 181 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GL +D +V + + DF A++ +K N D ++ +++Q Sbjct: 182 GLGSFFKDAFAKLGGEIVSEEQFQTNQTDFKAILTNIKAANPDIIFAPSSITTAPLIIKQ 241 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ--DPANQGIVDALKA--- 290 AR +G+ + N+++ AG AEG++++ + + + K Sbjct: 242 ARELGITATIAAGDTWENSTIIENAGKDAEGVVLSTFFDEAEPANDEAAAFIKGFKEYLV 301 Query: 291 --DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGD 348 ++D + Y + + A+E S + A+ LK + V G + ++E GD Sbjct: 302 KNKQEDIIPAVSALGYDSYLAAIKAIETANSTDTTAIRDALKGVQIDGVTGSITFNETGD 361 Query: 349 LKGFDFGVFQWHADGSS 365 D + DG Sbjct: 362 -ANKDIAFIKTIKDGKF 377 >UniRef50_Q2JNB6 Hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein n=3 Tax=Bacteria RepID=Q2JNB6_SYNJB Length = 417 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 95/385 (24%), Positives = 162/385 (42%), Gaps = 34/385 (8%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDA 75 + + A +K+ + +++G + +G+ G + AI INA GGI G VE DD Sbjct: 30 STAQQATQGPVKIGALMSLTGDLQAFGENCLKGIKLAIDQINAAGGILGSPAQVVEADDQ 89 Query: 76 CDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASD-IYEDEGILMISPGATNPELTQ-R 132 + A+ A ++V + + +IG L S T P + + I ISP +T P +T Sbjct: 90 TSAQPAIDAAQRLVTVEKVAGIIGALGSGITIPVATTVSVPNRIPQISPASTAPTITTLE 149 Query: 133 GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANV 192 + RT D+ QG A+ I K +R+AII+ YG+GLA S + + + Sbjct: 150 DNDFLFRTVPSDAYQGVALAQ-ITREEKLERLAIIYINNDYGQGLADSFKTAFEKRGGTI 208 Query: 193 VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVG 252 G+ + + + +LK+ + + GY +LRQA GL +F+ +G+ Sbjct: 209 TKSVPYEPGKASYRSELTQLKEGDPQALVLIGYPENGVVILRQALEEGLFDRFVFTDGMR 268 Query: 253 NASLSNIAG-DAAEGMLVTMPKRYDQDPANQGIVDALKADKKD-PSGPYVWITYAAVQSL 310 + ++ G + EG + P+ A Q +A KA + P PY+ Y A L Sbjct: 269 SPDVAAQVGAEKLEGSIGVSPQALTDSKAYQIFAEAYKAAYGELPPTPYIDTAYDAAFVL 328 Query: 311 ATALERTGSDEPLALVKDLKANG--------------------------ANTVIGPLNWD 344 A A+++ GS + A+ L+ G +N+D Sbjct: 329 ALAIQKAGSTDGTAVRDALREVANPPGTEILPGEWAKAVELIGKGEDIFYTGASGSINFD 388 Query: 345 EKGDLKGFDFGVFQWHADGSSTAAK 369 E G++ G F + + G K Sbjct: 389 ENGEVAG-TFAHWTFQ-GGKVVDLK 411 >UniRef50_D2LDZ1 Extracellular ligand-binding receptor n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDZ1_RHOVA Length = 404 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 76/364 (20%), Positives = 146/364 (40%), Gaps = 16/364 (4%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 A+ IK+ + G +G + G +G + A++++N GG+ G L VE DD + Sbjct: 23 AAEPIKIGLSGPFTGGSSSMGVSMRDGVKLAVEEVNKAGGVLGRPLQLVERDDEAKNELG 82 Query: 82 VAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ----- 135 +A +++N + + +G + + A Y++ I +I+ AT +T + + Sbjct: 83 AQIAQELINKEKVVATLGFINTGVALAAQRFYQEAEIPVINNVATGTVITNQFKKPDYDT 142 Query: 136 -HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 ++ RT+ DS Q A+ ++ ++IAI+ D YG+ ++ L+ V Sbjct: 143 NYVFRTSAYDSIQAGMMAEEAVKGRGYKKIAILADSTNYGQLGREDLEKALEKLGVKPVA 202 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + + D +A + R K+ + + G PE+ Q+ +G + Sbjct: 203 VEKFNIKDVDMTAQLLRAKEAGAEALLCYGIGPELAQIANGRAKLGWNVPMITSWPSSMQ 262 Query: 255 SLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKK--DPSGPYV-WITYAAVQSL 310 S +IAG G+++ D+ P +DA P Y +V L Sbjct: 263 SFIDIAGANGNGVMMPQTFIEDKTLPKRAAFLDAYYKTFGVTKIPTPVAGAQGYDSVLLL 322 Query: 311 ATALERTGSDEPLALVKDLKAN--GANTVIGPLN--WDEK-GDLKGFDFGVFQWHADGSS 365 A A+ + GS + A+ L+ V+ + E + + VF DG Sbjct: 323 AAAINQAGSTDGPAIRAALEDLKEKVEGVVTTYEKPFSETDHNAISANIPVFGMVKDGKI 382 Query: 366 TAAK 369 A+ Sbjct: 383 VYAR 386 >UniRef50_C8X2A2 Extracellular ligand-binding receptor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2A2_DESRD Length = 393 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 86/353 (24%), Positives = 156/353 (44%), Gaps = 13/353 (3%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 +K+ V +S A G +G A+++IN++GGI G L V YD D A Sbjct: 42 QTQALKIGAVLRLS-KGASDGLPARHGIEIAVQEINSQGGIDGRPLEVVYYDSKDDATTA 100 Query: 82 VAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 V K+++ D ++ +IG + S + A+ + + +++++P T+P +++ G + R Sbjct: 101 VNAVQKLISVDEVEAIIGPMMSGNVLAAAPLCQRNNVVLLTPTGTSPRISEAGS-YTFRL 159 Query: 141 AGLDSSQGPTAAKYILETVKPQ-RIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 Q + L V + I++ + YG+G L + + Sbjct: 160 CSRIDDQARALVQEALSRVGADPTVTILYSNEPYGKGSKELFTRYLAEQDITPATVESFQ 219 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+KDF A + ++K+ N D ++ GY E ++ QAR +G+ +G G + Sbjct: 220 RGDKDFQAQLTKIKQLNPDILFVPGYLQETAPLISQARQMGINALSVGVFGDMAPKYIEL 279 Query: 260 AGDAAEGMLVTMPKRYDQDPA-NQGIVDALKADKKDPSGP-----YVWITYAAVQSLATA 313 AG AAEG L+ +D NQ V+A +A D + +TY AV L + Sbjct: 280 AGKAAEGHLIAGEYNKHKDTEHNQDFVNAYEALLADQPKAPENIMFAALTYDAVHLLRQS 339 Query: 314 LERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 TG+ A+ L + + G L++D GD++ +F+ +G+ Sbjct: 340 F-STGATTGSAIQSFLDELEAFDGITGTLSFDANGDVQKGGVYLFEVQ-NGTY 390 >UniRef50_B1C374 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B1C374_9FIRM Length = 421 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 92/387 (23%), Positives = 156/387 (40%), Gaps = 26/387 (6%) Query: 1 MKRNA---------KTIIAGMIALAISHTAMADDI---KVAVVGAMSGPIAQWGDMEFNG 48 MKRN ++ + ++A + DI K+ +G +SG +Q+G N Sbjct: 36 MKRNLSKFKKVIATLSVASILVACGGGGGSATTDISEAKLGFIGPLSGDASQYGIAVKNA 95 Query: 49 ARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQP 107 AI + N + + V DD D + V NK+V +G+ +IG + S S Sbjct: 96 IELAINEYNDENDTN---ITAVYLDDKADATEGVNAYNKLVTEEGVNAIIGSVTSGSALA 152 Query: 108 ASDIYEDEGILMISPGATNPELT----QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR 163 E +GI +++P + ++T Y+++ R DS G AK ++ Sbjct: 153 VVATAEADGIPILTPSGSADQITINDEGETYENVFRICTNDSYAGTFLAKKCNTDFNYKK 212 Query: 164 IAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYY 222 +AI+ + Y GL + + K N VVF + T KD+S I++LK E D ++ Sbjct: 213 VAILSNKDSDYSTGLRDAFVEEAKNQNVEVVFDETYTKDTKDYSTYISKLKNEEYDTIFL 272 Query: 223 GGYYPEMGQMLRQARSVGLKTQFMGPEGVGN-ASLSNIAGDAAEGMLVTMPKR-YDQDPA 280 YY ++ +++Q R G+ T +G +G +S + G+ G T D Sbjct: 273 PDYYEQVVTIVQQFRDAGINTPLLGADGWDGVLGVSGVDGNIFNGSYYTSGFDKNSSDEN 332 Query: 281 NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGAN-TVIG 339 Q V K + Y AV + A+ER G+ E + + L V G Sbjct: 333 VQRFVKNYTDKYKTEPNMFAAFAYDAVFVMMDAMERAGTTESSKVNEALADTNYKNGVAG 392 Query: 340 PLNWDEKGDLKGFDFGVFQWHADGSST 366 +D+K + V +G Sbjct: 393 AFKYDKKHNPIKEMVIVG--FENGEYV 417 >UniRef50_C0Z9I1 ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9I1_BREBN Length = 376 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 153/366 (41%), Gaps = 12/366 (3%) Query: 9 IAGMIALAISHTAMADDI--KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGD- 65 AG + + +I K+ VVG +SG A +G+ + G A+ ++N KG Sbjct: 14 AAGEGGSGQAASTDGQEIQAKLGVVGFLSGSGAAYGEAQKAGLELALGEVNEAN--KGKL 71 Query: 66 KLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 K+ D A + + A+ NK++ D + +IG S A + + + Sbjct: 72 KIELKFEDSAGEKEGAINAVNKLINQDNVVAIIGPTLSGEMFAAGPVANEAETPIFGISN 131 Query: 125 TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQD 183 T+ + G +++ R + +S PTA K +E +++A+IH + + ++ Sbjct: 132 TSEGINDIG-EYVFRNSLPESIAIPTAMKAAVEKNGLKKVALIHASNDDFSVNGYKVMKA 190 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 + + G+ DFSA + +LK+ N D + Y E ++++AR +G Sbjct: 191 TAEKLGLEITGEATFANGDVDFSAQLTKLKQTNPDALLVSALYKEGSMVVKKARELGFTR 250 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWI 302 +G G N + IAG AAEG++V P + +D Q V A +A + Sbjct: 251 TILGGNGFNNPKVFEIAGPAAEGLIVATPFSPEKKDDKVQAFVKAFEAKYNKKPDQFAAQ 310 Query: 303 TYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHA 361 Y ++ ++ +L G + AL L V G L++DEK + G V Sbjct: 311 AYDSLYIMSQSLLAAGKADREALRGQLAQLKDFTGVSGKLSFDEKRNPIGDAVVV--VAK 368 Query: 362 DGSSTA 367 +G Sbjct: 369 EGKFVP 374 >UniRef50_A5CZK0 ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CZK0_PELTS Length = 379 Score = 307 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 102/355 (28%), Positives = 153/355 (43%), Gaps = 9/355 (2%) Query: 14 ALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYD 73 H + +DI + + A M G A+ +IN +GGIKG K+ VE D Sbjct: 27 LAGCFHRSGREDIVIGLAWP----FATKNSMLKEGVELAVDEINGRGGIKGKKIRLVEKD 82 Query: 74 DACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR 132 D V A +V + VIGH S + AS IYE+ G+LM+SP +T P LTQR Sbjct: 83 DEGTVTGGVNAAQSLVKIPNLVAVIGHRASFVSIAASAIYEEAGVLMLSPASTAPNLTQR 142 Query: 133 GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANV 192 GY+ I R D A + +R+A+ + + YG GLA S +D K A + Sbjct: 143 GYKLIFRNIPGDDEIARQLALFAA-GRGHRRMAVYYSEDSYGLGLANSFEDHAKKAGIKI 201 Query: 193 VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVG 252 + A + D + L + + + D ++ Y P+ + + A G+ F+ + + Sbjct: 202 IDRISYYADQDDLARLAKKWQALDYDGIFVAHYMPDGAEFIADAAKAGITAPFLAGDAMD 261 Query: 253 NASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 L IAG AAEG +V D P + ++ PY Y AV LA Sbjct: 262 TPELYKIAGKAAEGTVVGSIFNPGDPRPETRQFIENFSKKYNTAPTPYAAQGYDAVHLLA 321 Query: 312 TALERTGSDEPLALVKDLKA-NGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 A+E +GS +P A+ L+ G + E GD G + V + DG Sbjct: 322 AAVEESGSTDPRAVAGKLRTFKDRPGAAGTHTFTENGDDVG-NLVVKKVIRDGQF 375 >UniRef50_C8SVY2 Extracellular ligand-binding receptor n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SVY2_9RHIZ Length = 373 Score = 307 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 2/366 (0%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 + LA++ A A DIK+ +V M+G +A G N + AI +NA+GG+ Sbjct: 10 KRLACATALAGLAMTTMAAAADIKIGIVAPMTGQLASEGQDMENAVKMAIDAVNAQGGVN 69 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 123 GDK++ DDACDP+QAV +K+V++G+ ++G CS + P IY D GI + G Sbjct: 70 GDKIITTTADDACDPQQAVTAGSKLVSEGVTAIVGGYCSGAVLPTLKIYGDAGIPFVIIG 129 Query: 124 ATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183 A + +L + Q TA + + + ++IA++ + Y L + + Sbjct: 130 ANSTKLVAANQGNAFLANSTGDMQATTAVE-LFKKNGYKKIAVVDEGDAYSSDLGKLTAE 188 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 K A + + TAGE+D+SA++ ++K D V++ Y+ + +Q R G + Sbjct: 189 AFKGAGGEIAAKETTTAGEQDYSAVVTKIKSSGADAVFWTAYHAGGALLTKQLRQAGFQG 248 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWIT 303 + +G + IAG A EG+ + P D K +G Y ++ Sbjct: 249 GIVLGDGNNSPEYLEIAGSAGEGVYLLSPPTVDLLSGAADFKAKYKETYGRDAGAYAALS 308 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADG 363 Y +A A+ R S + A+++ LKA+ + G + + +K L+ +F G Sbjct: 309 YDVGDLIADAITRAKSADQKAIIEALKASDFKGLAGEIKFTDKNTLQTSNFRPV-IAKGG 367 Query: 364 SSTAAK 369 A + Sbjct: 368 KWVAVE 373 >UniRef50_A0LGK7 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGK7_SYNFM Length = 375 Score = 306 bits (786), Expect = 7e-82, Method: Composition-based stats. Identities = 86/356 (24%), Positives = 148/356 (41%), Gaps = 11/356 (3%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 S +D IK+ + M+G +A +G+ME+ G + A + + G K+ V D D Sbjct: 21 SLALASDTIKIGLYLPMTGGVAAYGEMEWAGIQIARDM---EPQVLGKKIDLVLLDTKSD 77 Query: 78 PKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 +A +V + + +IG S +T + I E GI +SP AT+ L +G + Sbjct: 78 KIEATNAMTLLVEKEKVAGIIGEAISGNTMAGNRISEAAGIPSVSPSATS-VLVNQGKKF 136 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFF 195 R +D QG AA++ + +K + A+I D Q Y GLA+ + V+ Sbjct: 137 AFRACFIDPLQGEVAARFAVNNLKAKSAAVIIDNAQDYCVGLAKFFETEFVKLGGKVLSK 196 Query: 196 DGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 255 I G++DFSA ++ ++ D +Y YY E + +QAR +G+ + +G + Sbjct: 197 TYIQTGDQDFSAQLSSVQAVKPDIIYAPNYYTEDALLAKQARDLGIVCPILTGDGAQADT 256 Query: 256 LSNIAGDAAEGMLVTMPKRYD--QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 L + G A E M T D + K + + + A L A Sbjct: 257 LIQVGGKAVEDMYFTAHFHKDAATTDRAAEFMKRYKEKHNKEADAFQALGADAYFLLVDA 316 Query: 314 LERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 + R GS + + L + V G + E+G+ + + A+G Sbjct: 317 VRRAGSTDGARVRDALASTKDFKGVSGTITMGEEGNPIKS-MVILKV-ANGKFVYV 370 >UniRef50_Q7WM42 Putative amino acid ABC transport system, substrate-binding protein n=2 Tax=Bordetella RepID=Q7WM42_BORBR Length = 379 Score = 306 bits (785), Expect = 8e-82, Method: Composition-based stats. Identities = 86/352 (24%), Positives = 146/352 (41%), Gaps = 8/352 (2%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 I V V +SG A G + GA A++ INA GG+ G L D+AC+P + V Sbjct: 25 QPIVVGVSTPLSGSAAFQGQHDRWGAELAVEQINAAGGVLGRPLQLNVQDNACNPAEGVN 84 Query: 84 VA-NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR----GYQHIM 138 + N + V G +CSS T I E + M+ ++ +T++ G Sbjct: 85 SVGRMLENRDLVAVSGAMCSSVTLALMPIVERASVPMLVSSSSAASITEKAGAGGNIWTF 144 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R D S A Y+ + + ++IA++ + YG G A ++ LK + + Sbjct: 145 RAGPSDDSMAVALATYLKDEARFKKIAVLGENTDYGRGGAAAIAKALKPLGVTITSSEYY 204 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 G +DF+ ++ RLK D + + +RQ R G++ G +G Sbjct: 205 DKGTQDFTTVLTRLKLAAPDAIALYTVGADQINFIRQYRGFGMRVPLTGRIELGGLQAEG 264 Query: 259 IAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERT 317 I A G + D PANQ V A K K+ I+Y +Q LA A++R Sbjct: 265 IKSGAINGATSVFQYAAELDTPANQAFVKAYKEKYKEDPLLQSAISYENIQLLADAIKRA 324 Query: 318 GSDEPLALVKDLKANGANTVI-GPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 GS + A+ ++A+ +++ G + +D+ + + + A Sbjct: 325 GSVDRKAVRDAIQASDYASMMGGRVAFDKNNQAHN-NAVILKVEDGKVKVVA 375 >UniRef50_C2D7C9 Branched chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7C9_9ACTN Length = 434 Score = 306 bits (785), Expect = 9e-82, Method: Composition-based stats. Identities = 83/381 (21%), Positives = 160/381 (41%), Gaps = 21/381 (5%) Query: 5 AKTIIAGMIALAIS----HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 A T++ G+ +A + +D +KV V+G +G +AQ+G NG + +K NA G Sbjct: 51 AATLMGGLSIIAGCNNNMSSQSSDSLKVGVMGPYTGDVAQYGLAIRNGVQLYVKQFNANG 110 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G + + D+ D +A V K+++ + +IG + S+ + + + ++ + +I Sbjct: 111 GVNGKTVDLMIEDEKGDSTEAKNVYEKMLDAKVLAIIGDVTSTPSIAVAQVSANDNMPLI 170 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLAR 179 S AT P T G+ + R D QG AK+ + + + I++ Y G+ + Sbjct: 171 SASATAPAFTSFGH-NAFRATMTDDFQGKVMAKFAQKQ-GYKTVGTIYNSGGDYESGINK 228 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + NV AG+ DF+A + + + D V+ YY + G+++ QAR + Sbjct: 229 IFVEECQQLGINVTSQQAYAAGDVDFNAQLTAIFATSPDAVFCPNYYQDSGKIVTQARQL 288 Query: 240 GLKTQFMGPEGVG---NASLSNIAGDAAEGMLVTMPK-RYDQDPANQGIVDALKADKKDP 295 G K F+G +G + + + EG P + + + V A + Sbjct: 289 GYKGVFLGADGWANMVDGDDKYASPEDLEGCYYNCPFIVENDNDKVKDFVKAYHDEYGKN 348 Query: 296 SGPYVWITYAAVQSLATALERT---GSDEP------LALVKDLKANGANTVIGPLNWDEK 346 + + Y A + AL+ G +P AL+ + + + V G + ++ Sbjct: 349 PSNFCALGYDAAMMMCAALKTVDDKGDVKPGTEEYKQALIDAIAQDKVDGVTGSIAFEGT 408 Query: 347 GDLKGFDFGVFQWHADGSSTA 367 GD V + Sbjct: 409 GDPVKSTLVV-TFDKGKQKVF 428 >UniRef50_A9BJ64 Extracellular ligand-binding receptor n=2 Tax=Thermotogaceae RepID=A9BJ64_PETMO Length = 376 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 89/378 (23%), Positives = 159/378 (42%), Gaps = 21/378 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIK---DIN 57 M++ + +I + IK+ + ++GP++ +G M +G A K +N Sbjct: 1 MRKTVVLVFLVVIMTFTLFG--QEVIKIGMNFELTGPVSGYGQMSRDGVMLANKLKPTVN 58 Query: 58 AKGGIKGD--KLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYED 114 I G K+ V D+ D ++ ++++ + + VIG SS+ A+ I E+ Sbjct: 59 ----IGGKEIKVEVVAVDNKSDKAESANAIRRLIDHEKVVAVIGPATSSAALAAASIAEE 114 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQY 173 I M+ ATNP L + +++ RT D+ QG A + E + Q +AI+ D Q Y Sbjct: 115 RQIPMVVNTATNP-LVAQNKKYVFRTCFEDTLQGALLATFAWEELGAQNVAIMVDVAQDY 173 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 GLA + + F + T G++DF+A + +N D ++ GYY E+ + Sbjct: 174 VVGLANYFEKAFEQFGGTY-FTEFYTTGDQDFTAQLTDALSKNPDAIFMPGYYAEIALIS 232 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ--DPANQGIVDALKAD 291 +QAR +G +G L I G+ EG+ T D PA + V+A + + Sbjct: 233 KQARDLGFTGPMFAGDGADAPELIQIGGEYVEGLSYTTYFHEDAELSPATKPFVEAYQEE 292 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNW-DEKGDL 349 + + + Y A + A+E S +P+ + L V G + + G+ Sbjct: 293 YNRRADAFGALAYDAYMVIVNAIESAQSTDPVKIRDALAQTRDFPGVAGTITYPQGSGNP 352 Query: 350 KGFDFGVFQWHADGSSTA 367 V +G Sbjct: 353 IKPA--VINMVENGQFVF 368 >UniRef50_C4XSR4 ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSR4_DESMR Length = 415 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 95/391 (24%), Positives = 155/391 (39%), Gaps = 27/391 (6%) Query: 1 MK-RNAKTIIAGMIALAISHTAM-------ADDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 MK + TI+AG + +A+S +K+ V +SGP A G A Sbjct: 1 MKNGSITTILAGCMGMALSAALFAAPALAADKTVKIGNVEPLSGPSASVGVQGKQAREMA 60 Query: 53 IKDINAKGGIK---GDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPA 108 I++INA GGIK G KL V D DP V +++N + + + G S+ T PA Sbjct: 61 IEEINAAGGIKSLGGAKLELVYADSKSDPTVGVTETERLINTEKVNLMTGCWNSAVTYPA 120 Query: 109 SDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILE-----TVKPQR 163 + + E GI + P A +T+RG++++ R A DS +++ + VK Q+ Sbjct: 121 TQVAERYGIPFVVPVAVRDTITERGFKNVFRIAAKDSWWVRDQFRFLKDMQEETGVKLQK 180 Query: 164 IAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYG 223 IA + + +G G A ++ K VV + + D + ++ +LK D V Sbjct: 181 IAFVFENGDWGTGFAEKWRELAKKDGYEVVLDEPYPSTATDLTPVVTKLKAAKPDIVMLV 240 Query: 224 GYYPEMGQMLRQARSVGLKTQFM--GPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PA 280 + + + +K + + G + A G+ + D + PA Sbjct: 241 SNAADAILLTNTMAEMQVKPKVVLASGGGHADPKFLENTDTNALGIFDEVEWNTDVNKPA 300 Query: 281 NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP 340 + + K Y A+ +A ALER S EP + L A T G Sbjct: 301 AKPANEKFKKKYGYDLTGESVDAYVAMYVIADALERAASTEPAKIRDALAATNLTTGPGM 360 Query: 341 ------LNWDEKGDLKGFDFGVFQWHA-DGS 364 + +DE G K + Q DG Sbjct: 361 VVSYDGVQFDETGQNKNAGIVIVQVANVDGK 391 >UniRef50_A9BM94 Extracellular ligand-binding receptor n=15 Tax=Comamonadaceae RepID=A9BM94_DELAS Length = 422 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 97/345 (28%), Positives = 159/345 (46%), Gaps = 7/345 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG-IKGDKL--VGVEYDDACDPKQA 81 +++A G +SGPIA G E NG R A+ D+NAKG I G KL DD DP QA Sbjct: 72 VVRIAHAGPVSGPIASLGKDEENGVRMALDDLNAKGLEIGGRKLRWKLEAGDDGGDPGQA 131 Query: 82 VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 VA+A ++ + + V+GHL S +T PA+ IY D GI+M++P A+NP +TQ GY R Sbjct: 132 VALARRLCDKKVAAVVGHLQSGTTLPATSIYHDCGIVMVTPAASNPAITQAGYDTTYRVI 191 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 D + + + + +R AII D+ YG+G+ + + +V Sbjct: 192 ADDRAMVDALVAHAVGKLGVKRAAIIDDRSAYGQGIVALFEAEAREQGIEIVDKQFTGDK 251 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL-KTQFMGPEGVGNASLSNIA 260 DF ++ +K + D +++GG + G MLRQ + + K + +G +G+ L +A Sbjct: 252 ATDFVPILTAIKGKKPDAIFFGGLDAQAGPMLRQMAQLAMDKVRLLGGDGLCTLRLPELA 311 Query: 261 GDAA---EGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERT 317 G+ + ++ P D + Y A LA A+ R Sbjct: 312 GNTSPLRNVTCAVGGSPLERMPGGAAWKQRYDQRFPDQYQVFSPYAYDATMVLAQAMLRA 371 Query: 318 GSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 S P A + L+ + V P+ + +G+L+ ++ + Sbjct: 372 DSIRPDAYIPYLRQTRHDGVTAPIAFTPQGELQAPVVTLYHYAQG 416 >UniRef50_C5ELH4 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELH4_9FIRM Length = 402 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 85/397 (21%), Positives = 157/397 (39%), Gaps = 31/397 (7%) Query: 1 MKRNAKTIIAGMIALAISHTAM-------------------------ADDIKVAVVGAMS 35 MK+ T +A + A++ + D I++ + A++ Sbjct: 1 MKKILGTSMALALTFALTACSGNPAPKADAGKGSEVPAKETTAEAVKGDTIRIGITTALT 60 Query: 36 GPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKY 95 GP G G A+++INA GG+ G L V DD + NK++++ + Sbjct: 61 GPSPLNGQRTKEGVTMAVEEINANGGVAGKTLEAVIEDDGATTSGTMNSVNKLLSENVVA 120 Query: 96 VIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYI 155 +IG SS+ + +++ + + G ++P L ++ R DS A KY+ Sbjct: 121 LIGPHMSSNVVAVQEQLKNQKMPFLY-GGSSPTLLDLNNEYGFRVRPSDSLACKIACKYL 179 Query: 156 LETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKE 215 + ++ + I +I D + V+ LK + +G G+KD + + +LK Sbjct: 180 TDKLQCKNIGMIFDNDNWATSAKDVVEATLKEQGVGFIS-EGYNTGDKDMTGQLTKLKNS 238 Query: 216 NIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA-EGMLVTMPKR 274 ID + G+ E+ + +Q + VG+ T MG G +++ ++ + EG+ Sbjct: 239 GIDALIIWGHDAEIAIIAKQIKEVGIDTPIMGSAGFAMSTVLDLIDPSVSEGICSVSEFT 298 Query: 275 Y-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KAN 332 D G V Y Y AV L A+ER GS EP L L + Sbjct: 299 PYSDDERVSGFVKRYHEKYNSDPDLYSAAYYDAVYLLKDAIERAGSTEPDQLRTALAETK 358 Query: 333 GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 G V+ + +KG++ + + Q + + Sbjct: 359 GLAGVMSTMTASDKGEMI-HEMNICQVKDGKAYVIER 394 >UniRef50_A5D536 ABC-type branched-chain amino acid transport systems, periplasmic component n=2 Tax=Bacteria RepID=A5D536_PELTS Length = 407 Score = 304 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 79/383 (20%), Positives = 151/383 (39%), Gaps = 20/383 (5%) Query: 1 MKRNAKTIIAG---MIALAISHTAMA-------DDIKVAVVGAMSGPIAQWGDMEFNGAR 50 MKR A +I L + +++KV V+ ++G A +G+ME N Sbjct: 1 MKRFRWQFAALSFIIIGLMLIAAGCGGGQGAKKEEVKVGVILPLTGSEAMFGEMEKNSFE 60 Query: 51 QAIKDINAKGG--IKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQP 107 A++++ A G I G ++ + DD A + A K+V D + + G S+ + Sbjct: 61 MALEELKAAGKAAIGGKEIKLLFEDDQGKQDVAKSAAEKLVNQDKVVMLTGGYSSACSNV 120 Query: 108 ASDIYEDEGILMISPGATNPELTQRGYQHIMR-TAGLDSSQGPTAAKYILETVKPQRIAI 166 + + I + ++ ++T++G+Q + R A S I + VKP+ +A+ Sbjct: 121 IAGSAQAMNIPFLVVTGSSDDITKKGWQWVFRGAAAPASKYTGALWDMIEKVVKPKNVAL 180 Query: 167 IHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYY 226 I++ +G A++ + + N+VF G DF ++A ++ N D ++ Y Sbjct: 181 IYENTDFGTSSAKAFRADCEKRGINLVFDQAYEHGAIDFKPMLANMRSTNPDMIFAVSYV 240 Query: 227 PEMGQMLRQARSVGLKTQFM--GPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQG 283 + + +Q + + G G AG A+E + T + P Sbjct: 241 MDAAMITKQMKELDFNVNLFVGGGAGYTMPEFKENAGSASEYVASTTLWVPNVAWPGASD 300 Query: 284 IVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW 343 + K + YA + +A AL R + K LK T++GP+ + Sbjct: 301 YFNKYKQKYGKEPDYHGAQAYATMYIIADALSRAKELTNTGIQKALKETDMMTIMGPVKF 360 Query: 344 DE---KGDLKGFDFGVFQWHADG 363 ++ + V QW Sbjct: 361 EDWEGYTNQNKPTTYVVQWQKGK 383 >UniRef50_A1AQF9 Extracellular ligand-binding receptor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQF9_PELPD Length = 372 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 138/372 (37%), Gaps = 10/372 (2%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R +++A I++ VG MSG +A G NGA A+++ NA+GGI Sbjct: 6 RFLYSLLALGCIALFLSGCERKPIRIGFVGGMSGRVADLGVGGRNGALLAVEERNARGGI 65 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G + + DD + + A V ++ ++ +IG + SS I ++ +SP Sbjct: 66 NGRPVELIIRDDEQNVETARKVTRELTESNVEALIGPMTSSVALAMVPIVNQARLVTVSP 125 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD--KQQYGEGLARS 180 T+ +L+ + +R S+ P +A + L+ +R AI++D Y Sbjct: 126 TVTSTQLSGAD-DYFLRVLPDTSTYAPKSALFHLKKSGLRRAAIVYDTGNSSYTTSWLAG 184 Query: 181 VQDGLKAANANVVFFDGITAGEK-DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + + + ++V T+GE FS ++ L + + D V + + +Q R + Sbjct: 185 FRKSFENSGGSIVVSRSFTSGENIAFSPIVRDLLRHDPDLVVLVCNAVDAALLCQQIRKL 244 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP-KRYDQDPANQGIVDALKADKKDPSGP 298 + E + G A EG+ D P + + + + G Sbjct: 245 DRRVTITVSEWGSTERFIELGGSAVEGVYFAQFINHGDVTPRYRNFLASYRTRFGQDPGF 304 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVF 357 Y A + AL D +L + A V + D GD + F Sbjct: 305 PGLAGYDAANVVLDALTARKGD--ASLKDTIVSAGSYQGVQRKIVLDRFGDARSTTF--I 360 Query: 358 QWHADGSSTAAK 369 DG + Sbjct: 361 TVVKDGRFVTLE 372 >UniRef50_C7NDV1 Extracellular ligand-binding receptor n=3 Tax=Leptotrichia RepID=C7NDV1_LEPBD Length = 372 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 100/372 (26%), Positives = 170/372 (45%), Gaps = 15/372 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD---IKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 MK+ + + + + D IK+ V+GA++G +AQ+G NG + +K+IN Sbjct: 1 MKKILFLVSLLALFVLSCGAKASKDKNVIKIGVIGALTGNVAQYGTSTINGFKLKVKEIN 60 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEG 116 A GGI G K+ VE D D ++A+ K+V D I +G + S + + + + Sbjct: 61 AAGGINGKKIEIVEADSKGDVQEAINAFKKMVSQDKIDIFVGEVTSGPSLAIAPLAQQAK 120 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGE 175 I MI+ T ++T +G + RT D QG AKY ++ + I ++ + Y Sbjct: 121 IPMITATGTAFDIT-KGKDFVYRTTFTDPYQGVVVAKYA-KSKGYKSITVLTNTGSDYSV 178 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GL+ + ++ + V + TA +KDF AL+ ++K N + ++ YY +G +L Q Sbjct: 179 GLSNAFKEQAQKEGIQ-VKEEQYTADDKDFRALLTKVKGYNSEVIFVPDYYNTIGLILTQ 237 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKD 294 A+ +G+ +QFMG +G G A G + D D Q + A K + K Sbjct: 238 AKELGINSQFMGGDGWDGIQ--TNFGKVANGAVFASQFAPDDPDQNVQKFIAAYKNEYKI 295 Query: 295 PSGPYVWITYAAVQSLATALERTGSD-EPLALVKDLKA-NGANTVIGPLNWDEKGDLKGF 352 + + Y L TAL+ A+ + +K NGAN V G L +D + + + Sbjct: 296 DPIIFAALGYDTGTILETALKNVSDLSSKDAIKEAIKNFNGANLVTGSLKYDAERNPEKK 355 Query: 353 DFGVFQWHADGS 364 + DG Sbjct: 356 VTFIE--VKDGK 365 >UniRef50_C1CVB8 Putative branched chain amino acid ABC transporter, periplasmic component n=1 Tax=Deinococcus deserti VCD115 RepID=C1CVB8_DEIDV Length = 384 Score = 303 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 81/373 (21%), Positives = 154/373 (41%), Gaps = 10/373 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M++ ++ +A A IK+ + +++G A++G M+ G + + ++N KG Sbjct: 1 MRKVMLFTLSIALA---GSAAAQGTIKIGAITSITGRFAEFGKMQLAGFKVGVAEVNRKG 57 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GI G K+ + D+A D + +A A ++VN G+ VI SS + + + + + Sbjct: 58 GIGGRKIELLIEDNASDVNKGLAAAERLVNAGVPLVINEYSSSLVKAQAQYLARQKVPNL 117 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS 180 ++ ++T+ G +I R + I K + +A+I + + +A + Sbjct: 118 VITSSGDDITKPGSDYIFRLNQPATEYARVILN-IFRDKKFKTMAVIAGTGAFEKSVADA 176 Query: 181 VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG 240 Q K ++V G DF ++ R+K +N D + Y + ++RQAR VG Sbjct: 177 AQVIAKEYGISIVEDQRYDKGLTDFRPVLNRIKAKNPDGLLMVSYAEDSVALMRQAREVG 236 Query: 241 LKTQFM--GPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGI-VDALKADKKDPS 296 +K + G G +G AAE ++ P Q + V+ +KA Sbjct: 237 VKPRLFAGGAAGFALPEFVKDSGSAAESVITATAWIPQLRYPGVQKLNVELVKALGGHEP 296 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKG--DLKGFDF 354 + YA V A A+ R G+ + + + L + T GP+ + + + Sbjct: 297 SYHAAQAYAGVIVAAEAIRRAGNTDREKVKEALNSVNMQTAFGPIQFKDYDGFRNQNPLV 356 Query: 355 GVFQWHADGSSTA 367 V Q G Sbjct: 357 MVAQQVQGGKFVP 369 >UniRef50_C5CRE7 Extracellular ligand-binding receptor n=27 Tax=Betaproteobacteria RepID=C5CRE7_VARPS Length = 379 Score = 303 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 95/345 (27%), Positives = 165/345 (47%), Gaps = 6/345 (1%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK---LVGVEYDDACD 77 +K+ G +SGP A G NG R AI+++NAK G K V DD CD Sbjct: 26 QQEQVVKIGHSGPLSGPNAFAGKDNENGVRLAIEELNAKKITAGGKTLKFELVSEDDQCD 85 Query: 78 PKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 K V+VA K+V+DG+KYV+G CS PAS IY + G M+S TNP++TQ GY+++ Sbjct: 86 AKSGVSVAQKLVDDGVKYVMGPYCSGVAIPASRIYAEGGT-MVSTVGTNPKVTQGGYKNL 144 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 R D+ G + A Y + +K ++ +I D+ +G+GLA K +V + Sbjct: 145 FRIIASDNQIGSSMAVYAAKVLKVSKVGVIDDRTAFGQGLAEEFSKEAKKQGLTIVGQEF 204 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 T DF+A++ +K + + +++GGY P+ M RQ + + + + +G + V + + Sbjct: 205 TTDKAVDFTAILTNMKAKAPEAIFFGGYAPQAAPMARQMKQLAVPGKLLGGDTVCSPATG 264 Query: 258 NIAGDAAEGMLVTM--PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 + GDA ++ ++ + K + Y Y + + +++ Sbjct: 265 KLGGDAVNDLVFCAQGGSILEKAQSGPAFKAKFKKRFNADADAYAASYYDQLMFIGESMQ 324 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 + S +P + +L V ++D+KG++K VF + Sbjct: 325 KANSIDPDKVGAELYKTTYKGVAATYSYDDKGNMKQAPITVFTFK 369 >UniRef50_Q03M75 ABC-type branched-chain amino acid transport system, periplasmic component n=55 Tax=Lactobacillales RepID=Q03M75_STRTD Length = 391 Score = 303 bits (778), Expect = 6e-81, Method: Composition-based stats. Identities = 82/390 (21%), Positives = 164/390 (42%), Gaps = 29/390 (7%) Query: 2 KRNAKTIIAGMIALAISHTAMA-------------DDIKVAVVGAMSGPIAQWGDMEFNG 48 K+ ++A ++ + + D IK+ V ++G +A +G E NG Sbjct: 3 KKITLIVLAFFASIFLVACGKSPDVTANAKGTKIGDTIKIGVNMELTGAVAAYGKSEQNG 62 Query: 49 ARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKI-VNDGIKYVIGHLCSSSTQP 107 + A+ +IN GG+ G K+ V D+ + +A + + + + ++G S + Sbjct: 63 IKLAVDEINKAGGVDGKKIELVTKDNKSENAEASTSSTNLAIQSNVNAIVGPSTSGAVAA 122 Query: 108 ASDIYEDEGILMISPGATNPELTQRGY---QHIMRTAGLDSSQGPTAAKYILETVKPQRI 164 AS + + G+ +I+P T +LT + + RT DS QG A Y + +++ Sbjct: 123 ASLVSQKTGVPLITPSGTQDDLTVDANGVKKFVFRTTFKDSYQGEVLAAYSYNNLNAKKV 182 Query: 165 AIIHDK-QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYG 223 + +D Y +G+A + K +V T+G+KD+ + + + K ++ D V Sbjct: 183 VLYYDNASDYAKGIADEFKRKYK---GQIVTEATFTSGDKDYQSALTKFKDQDYDAVVMP 239 Query: 224 GYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKRYD--QDPA 280 GYY E G + +QAR +G+ +GP+G + + +AG A + + Sbjct: 240 GYYTETGIITKQARDLGIDKPILGPDGFSDEKFTELAGKKNASNVYYVSGYSTNVALSDK 299 Query: 281 NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIG 339 G + A + K + + Y +V +A A + + + + +L V G Sbjct: 300 ASGFIKAYEKAYKIEPNMFAALAYDSVYMVAEASKGAKTS--VDIADNLANLKNFVGVTG 357 Query: 340 PLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + D+ + V + +G +A+ Sbjct: 358 KMTIDKDHNPIKAALMVKR--DNGEEVSAE 385 >UniRef50_A5FZN6 Extracellular ligand-binding receptor n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZN6_ACICJ Length = 373 Score = 303 bits (777), Expect = 7e-81, Method: Composition-based stats. Identities = 94/363 (25%), Positives = 163/363 (44%), Gaps = 9/363 (2%) Query: 4 NAKTIIAGMIALAIS---HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 AGMIAL+ A + I++ ++ M+GP A G + +GA+ A+ +INA G Sbjct: 3 RKLLFGAGMIALSCGLGVAHAASGTIEIGMIADMTGPAALSGQHKVDGAKLAVDEINAHG 62 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GI G K+ + DD + V+ K+ N I +IG + S+ Q I Sbjct: 63 GINGKKIKLIVEDDRGQNQAGVSAYQKLAANQNIVAIIGSIRSTIVQATLPYVARYKIPT 122 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 + G T+P+LT G Q + R D+ T A+Y ++T+ +++AI++D +G + Sbjct: 123 M-IGGTDPKLTHVGNQWVFRFRPNDTYASATMAQYAVKTMGSKKVAILYDTDAFGSAGNQ 181 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVY-YGGYYPEMGQMLRQARS 238 ++ L A VV G T +D+++ + ++K D + Y + QML+Q R Sbjct: 182 LLKAALVKDGAKVVSDQGYTTATRDYTSFLEKIKNSGADTLATYMTNSEDEAQMLKQLRQ 241 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP 298 + LK + +G + A +AG A +G D + A + A Sbjct: 242 LDLKVKIIGSTSIATAVCIQLAGSAVDGTYGVSDFVADGNDAAKAFTKLYVAKYHSQPDV 301 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVF 357 + Y A+ L+ + + G+ P A+ K ++A G + V G N+D GD + V Sbjct: 302 FGGWVYDAMNVLSRVIAKDGTA-PAAIQKGIRAVKGYHGVEGTYNFDANGDGL-HGYWVV 359 Query: 358 QWH 360 + Sbjct: 360 KMQ 362 >UniRef50_Q2IRP0 Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IRP0_RHOP2 Length = 378 Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats. Identities = 92/377 (24%), Positives = 160/377 (42%), Gaps = 15/377 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MKR +A +ALA A A +I + +GP A + G + A+ + NA G Sbjct: 3 MKRLM---VAIGLALAAPVAADAQNIVIGASIPDTGPAAAPAIWQRWGYQLALDEANAAG 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G K+ + YD+ C+P +AV VANK++ + ++G CSS+T + I ++ Sbjct: 60 GVLGKKVEMLAYDNRCNPSEAVNVANKLIEAKVVAIVGAHCSSATLATMPLIAAAKIPLV 119 Query: 121 SPGATNPELTQR----GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 A++P++T G + R D Y+ + K +R+AI+ + +G G Sbjct: 120 DGIASSPKITDLSGVGGNEWTFRINPSDDDMMNALGIYLSGSSKIKRVAILGEDTDFGRG 179 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 A + K V+ D DF+AL+ R+++ D + + LR A Sbjct: 180 GAAAFAAVAKKHGLEVISTDFHPQSYPDFTALLTRIQQSKPDAIAIFQLAGDQLNFLRNA 239 Query: 237 RSVGLKTQFMG--PEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP-ANQGIVDALKADKK 293 +G++ F+G G N + G EG + Y D AN+ ++ K Sbjct: 240 MQLGVRIPFIGRFDPGGNNLQIIQAGG--MEGSITAWTYSYLVDTAANKAFAAEIEKRHK 297 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIG-PLNWDEKGDLKGF 352 W Y A++ L A++ G+ +P A+ +K V+G + +D+ G Sbjct: 298 TTPVLQTWAGYDAMRLLLAAIKNAGATDPTAIRDAIKKIEFTNVMGAKVTFDDHNQ--GG 355 Query: 353 DFGVFQWHADGSSTAAK 369 + + AD K Sbjct: 356 KVVLIEGVADKKVKILK 372 >UniRef50_A4JTH7 Extracellular ligand-binding receptor n=3 Tax=Burkholderia RepID=A4JTH7_BURVG Length = 378 Score = 303 bits (776), Expect = 9e-81, Method: Composition-based stats. Identities = 103/362 (28%), Positives = 174/362 (48%), Gaps = 5/362 (1%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG- 61 R + +A+ +K+ V ++G ++ G + NG R AI+D+N+K Sbjct: 5 RLLRGFSFLTLAMQPLAARADLTVKIGQVSPLTGELSHIGKDDENGVRLAIEDLNSKKLR 64 Query: 62 IKGDKLVGV--EYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 I G + V DDA DP+ AV VA K+V+D + V+GH S ++ PAS IY D GI M Sbjct: 65 IGGQSVTFVLDSQDDAADPRTAVTVAQKLVDDHVAGVVGHANSGTSIPASKIYSDAGIPM 124 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 I+ ATNP LT++G++++ R D QG Y++ +K +++AI+ D+ YG+GLA Sbjct: 125 ITESATNPLLTEQGFRNVFRMVANDVRQGSVIGTYLVHDLKARKVAIVDDRTAYGQGLAD 184 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + +KAA VV + T D+ A++ +K D + + G + ++Q + + Sbjct: 185 QIDKAVKAAGGTVVAREYGTDKTTDWKAVLTTIKSRQPDAIAFTGGDTQAAAFVQQMQRL 244 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEG-MLVTMPKRYDQD-PANQGIVDALKADKKDPSG 297 GL F+ + ++AG + T+ D P + Sbjct: 245 GLTATFIAGDESCTPQFISLAGSSMNNKTYCTLAGVPPADMPQGPAFFKRFQQRFGAEVQ 304 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 Y Y AV ++A A++ S +P + L+A + V G + +DEKGD++ V Sbjct: 305 LYAPYAYDAVMAMAAAMQSADSTDPKIYLPKLQAVSVDGVTGSIRFDEKGDIRNGAITVR 364 Query: 358 QW 359 Q+ Sbjct: 365 QY 366 >UniRef50_A8TTJ6 Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTJ6_9PROT Length = 401 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 92/350 (26%), Positives = 168/350 (48%), Gaps = 5/350 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 A+ I++ ++G A G NGA A++ INA GG+ G L V YDD Sbjct: 38 GPVTAAEPIRIGFNVPLTGFAAADGASAKNGAELAVEQINAAGGVGGRMLELVSYDDQAS 97 Query: 78 PKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 PK+ V +ANK++ D + I S+ T+ A+ I++ + IS A +P++T+ G + Sbjct: 98 PKEVVPIANKLIEQDKVTAAISGSYSAPTRAAASIFQSAKVPYISAYAIHPDITRAG-DY 156 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 + RT+ + QG AK + + +K +R+ +I + +G+ LA ++ VV Sbjct: 157 VFRTSFMGEVQGRAGAKLVGDILKKKRVVMITLQNDFGKSLADGFKEAAGTFGVEVVAEY 216 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 + ++ F ++ R+K + + +Y GY+ G ++ Q R+ G+ +G EG + Sbjct: 217 EYSIKDRQFGPIVTRVKADAPEVIYASGYFFTAGPLVSQLRAAGIDVPVIGQEGYDSQKF 276 Query: 257 SNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 IAG A+EG+++T D +DP + + A + P+ + AV+ LA AL Sbjct: 277 IEIAGAASEGVIITTSLDRDSKDPEARDFIAAFEKKAGYPADMVAASGHTAVKVLAAALG 336 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 GS +P A+ + + G ++++ G+++ Q DG Sbjct: 337 AAGSTDPQAIRDAIAKSHVKASTGTISFNGLGEVEKD--VQVQIVRDGRW 384 >UniRef50_B5HG53 Extracellular ligand-binding receptor n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HG53_STRPR Length = 386 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 10/369 (2%) Query: 3 RNAKTIIAGMIALAISHT---AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 + A + G +AL + + +K+A G +SG G+ NG + AI NAK Sbjct: 8 KLAIPLAVGALALTGCGSDSGSGDGAVKIAFQGPLSGDNVALGENMQNGVKLAIDQANAK 67 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGIL 118 G + K+ V DD P +A A A KI++D G+ V+G S T +S +Y + G++ Sbjct: 68 GDLD-FKIEYVAGDDQGLPDKATATAQKIIDDPGVVAVVGPAFSGPTNTSSPLYAESGLV 126 Query: 119 MISPGATNPELTQR--GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 +SP ATNP LT + G+ +R D+ QG A Y + ++ +++ ++ DK YG G Sbjct: 127 TVSPSATNPLLTDKENGFTSFLRGVPNDNMQGAGMATYYAKKLQAKKVYLVDDKTDYGVG 186 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + GLK A VV + D+SA + D + Y GYY + ++ Sbjct: 187 LATVAEKGLKDAGIEVVKK-SVPQKTPDYSATAKDVVNSKADALIYAGYYQDAAPFAKKL 245 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN-QGIVDALKADKKDP 295 + G K + +G + +AGDA+E +T P A + + + + Sbjct: 246 KDAGYKGAAISGDGTNDMKFVELAGDASENWFLTCPCTDATVEAGTKKFAEDYQKEFGRA 305 Query: 296 SGPYVWITYAAVQSLATALERTGSD-EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 G Y Y + +++ G+D E AL L + ++ E G+ KG D Sbjct: 306 PGTYSAEAYDIANMIIAEVKKAGADVEREALRDALAKASYKGLTKTFSFGENGEFKGTDV 365 Query: 355 GVFQWHADG 363 ++Q Sbjct: 366 YLYQVKGGK 374 >UniRef50_A5FVF3 Extracellular ligand-binding receptor n=5 Tax=Bacteria RepID=A5FVF3_ACICJ Length = 381 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 99/349 (28%), Positives = 164/349 (46%), Gaps = 5/349 (1%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A + IK+ V ++G A G + NAKGG+ G K+ DD Q Sbjct: 24 AASGPIKIGVQAPITGAYADEGQGIEKAVKLLADQQNAKGGLLGRKIEVKVCDDEGKASQ 83 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 A A ++VNDG+ VIG S + A IY ++ + T+ +L RGY+ Sbjct: 84 AAICARQLVNDGVIAVIGSYTSGAALAAEPIYARSNVIQ-TSDGTSNKLLSRGYKTWFGN 142 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITA 200 A +S++ AKY+++ +RIA++ D + GLA +V +KA + V+ ITA Sbjct: 143 AAPNSAEAKFTAKYLIDVRHFKRIAVLTDHSSFATGLADAVIKNIKADHGKVIDKAFITA 202 Query: 201 GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIA 260 G ++F+ ++ +LK D +Y+ GYY + G + Q +G+ F+G + N + IA Sbjct: 203 GSQNFTPVLTKLKALKPDAIYFSGYYSDGGLIKAQMAQLGITATFVGGDANQNVAFGKIA 262 Query: 261 GDAAEGMLVTMPKRYD--QDPANQGIVDALKADKKD-PSGPYVWITYAAVQSLATALERT 317 G AA+G ++ + P + V A KA P + ++++ A+E+T Sbjct: 263 GSAAKGAIIVNVPGPEQLPYPTAKAFVAAYKAKYHQSPPSVFTLTNADGMRAVMQAIEQT 322 Query: 318 GSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS 365 S +P L L + + G W++KG+ G F F+ ADGS Sbjct: 323 KSVKPAKLEHYLHTMKSFDGLTGQFRWNDKGERVGSPFTAFEVQADGSY 371 >UniRef50_C0QII0 LivK2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QII0_DESAH Length = 371 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 82/363 (22%), Positives = 149/363 (41%), Gaps = 7/363 (1%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 +++ + A + V V ++G +A +G+ A ++INA GGI Sbjct: 3 KFTAGFICALSVFWAGAVFAGTVSVGAVTPLTGKLAVYGEGFQQAMLLAAEEINASGGIN 62 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 GD L V D+ K +V+ K++ D + V G SS+ I + ++I Sbjct: 63 GDTLEIVFEDNNSTSKGSVSAIRKLITIDKLTLVFGPAASSNFLAICPIAQKNKTILIGA 122 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 + E+T + ++ R D QG ++ + ++ + + + + +G GLA + Sbjct: 123 ESAAAEIT-KCGSYVFRVFPSDLLQGTGVSE-LASSLGYKEVVLTYVNNDWGVGLAEVFK 180 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 A+ ++ G+ D+ + I R+K+ N V Y E +L+QA GL Sbjct: 181 RQFLASGGKIIDELAHAEGKTDYRSEILRIKRHNPKVVVNLTYIKEGATILKQAYETGLN 240 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADK-KDPSGPYVW 301 TQ++ + L +AG AEG++ T P + P Q A + + + Sbjct: 241 TQWLMGSASKSPKLVALAGKTAEGIIGTYPTFSQESPEYQAFKTAWEKKYSGKKTPIFGE 300 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKAN--GANTVIGPLNWDEKGDLKGFDFGVFQW 359 Y V+ A AL GS + + + L G G ++DE GD+ G +G + Sbjct: 301 YNYDMVKLTALALRDAGSVDADTVRESLLKVSQGYMGTTGDKSFDENGDV-GATYGRWTV 359 Query: 360 HAD 362 Sbjct: 360 KDG 362 >UniRef50_D0D0C1 Extracellular ligand-binding receptor n=1 Tax=Citreicella sp. SE45 RepID=D0D0C1_9RHOB Length = 425 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 97/383 (25%), Positives = 164/383 (42%), Gaps = 18/383 (4%) Query: 2 KRNAKTIIAGMIALAISHTA-----MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 +R A +IAG ++ A ++K+ + +SGP A G G A+K+ Sbjct: 45 RRQALRLIAGATGATLATPAIIRAQTPSELKIGGMLPLSGPAAIEGHQVLKGLEFAVKEA 104 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDE 115 NA GG ++V + DD + + V K++ D + +++G S+ I ++ Sbjct: 105 NAAGGALDREIVLMVEDDEANTTRGVIAVRKLIETDKVPFIVGTYASAVVIATMQITKEY 164 Query: 116 GILMISPGATNPELT---QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ 172 G+ ++S G+T+ T + G R+ QG A I + +AIIHD Sbjct: 165 GVPLLSGGSTSVAATDANEPGNPWFFRSWPSSVDQGLDTANAITGRFGAKTVAIIHDSGS 224 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 YG L V+ +K ++ D AGE+DF+ L+ R++ E D VY GG+ + + Sbjct: 225 YGYSLGDQVEQVVKDNGGEILSRDTYNAGEQDFTTLLTRIRSEKPDAVYIGGWAGDGAMI 284 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKAD 291 +RQA VGL+TQF+G + + +AG A+EG V + +A+ Sbjct: 285 VRQATEVGLRTQFVGSGSMVSDDFIELAGPASEGFAVATLYEPSTPNVYGAEFGKRFEAE 344 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKA--NGANTVIGP----LNWDE 345 +G + + + A+ RTG + A+ + V GP +D Sbjct: 345 VGQAAGTLNSLGFDSTSIGIEAVRRTGGTDSKAVRDMIATGMADFPIVQGPEGATAAFDA 404 Query: 346 KGDLKGFDFGVFQWHADGSSTAA 368 KG + +F DG T A Sbjct: 405 KGSVDFPNFIA--VIKDGVRTLA 425 >UniRef50_C8VXD1 Extracellular ligand-binding receptor n=2 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VXD1_DESAS Length = 394 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 80/396 (20%), Positives = 143/396 (36%), Gaps = 29/396 (7%) Query: 1 MKRNAKTIIAGMIAL--AISHTA------------MADDIKVAVVGAMSGPIAQWGDMEF 46 M++ IIA ++A +S A + ++ V +SGP + G E Sbjct: 1 MRKLPVYIIASLLAAVFLLSGCASGTKETGAPTDTAKEPYRIGAVVDISGPSSSLGVPER 60 Query: 47 NGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSST 105 N + +NA GGI G + D+ D +AV K+++ + VIG S + Sbjct: 61 NTLQMLADKLNAAGGINGHPVELTILDNKSDETEAVMAIKKLIDRQKVLAVIGASSSGPS 120 Query: 106 QPASDIYEDEGILMISPGATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRI 164 D + E +IS A + + + + +TA D A Y+ E ++ Sbjct: 121 LAMVDTAQKEQTPLISMAAASTIVEPVAERKWVFKTAQSDLVTANRIAGYLKEK-GLTKV 179 Query: 165 AIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGG 224 A ++ YG+ + + + + + A +KD + + R+K Sbjct: 180 AFLYTNNAYGDNGRKGFEMVAQKEGLTITDEEKFEAADKDMTPQLTRIKNSEAQAAIVWA 239 Query: 225 YYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGM------LVTMPKRYDQD 278 P + R + + L + G GN +A AAEG+ + + D D Sbjct: 240 IPPTASIVTRNFKDLKLTIPLLHSHGSGNQKFIELAQGAAEGVILPIGKIAVAEQLPDSD 299 Query: 279 PANQ---GIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GA 334 P + +D P + Y A + A+E+ G D A+ +L+ Sbjct: 300 PQKKILTNYIDDYTKKYNAPPNSFGGYGYDAFNLVVRAIEKAG-DNKAAIRDELEKIQNF 358 Query: 335 NTVIGPLNW-DEKGDLKGFDFGVFQWHADGSSTAAK 369 + V G N D+ + + V DG K Sbjct: 359 SGVSGIFNLSDKDHNGLNAESMVLVEIKDGKWQLMK 394 >UniRef50_A9KIM2 Extracellular ligand-binding receptor n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIM2_CLOPH Length = 388 Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats. Identities = 83/390 (21%), Positives = 169/390 (43%), Gaps = 27/390 (6%) Query: 1 MKRNAKTIIAGMIALAISHTA--------------MADDIKVAVVGAMSGPIAQWGDMEF 46 +K+ A +A +A+++ A K+ +G ++G A +G Sbjct: 5 LKKLASLSLATAMAISLVGCGTKEGGSTPGNENGSGAATFKIGGIGPLTGEAASYGISVK 64 Query: 47 NGARQAIKDINAKGGIK-GDK---LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCS 102 NGA AIK+IN GG+ GDK L DD P+ AV N +++ G + ++G + S Sbjct: 65 NGATIAIKEINDAGGVTVGDKNYILEMNFADDQASPEIAVTAFNTVMDWGAQAILGSVTS 124 Query: 103 SSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQ 162 S + GI ++P + E T+ Y++ R D QG T A + + + + Sbjct: 125 GSCLAIRKDTFETGIFQLTPSGSAAECTE--YENAFRLCFTDPLQGVTLAN-LAKELGYE 181 Query: 163 RIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVY 221 +IAII++ Y G+ ++ + + +V + DF+ + ++K + + ++ Sbjct: 182 KIAIIYNNSDEYSTGVMQAFSEQVTLNGGTIVASEAFAKNAIDFNTQLTKIKATDAEVIF 241 Query: 222 YGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAA-EGMLVTMP-KRYDQDP 279 YY + + +QA +G+ F+G +G + L+ + A EG + P D+ P Sbjct: 242 VPAYYNDAAYITQQASDLGMNLPFLGSDGW-DGVLAQVKDPAVLEGAIFLSPFFASDEAP 300 Query: 280 ANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIG 339 + V+ +++ + Y +V + ALE+ S + ++ + + + G Sbjct: 301 VLKKFVETYQSNYNAVPDQFAADGYDSVYVIKAALEKASSVDSKDMISAMTQITVDGLTG 360 Query: 340 PLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 +++ G+ + DG+ T+ + Sbjct: 361 SVSFTADGEPNKGAKYIE--IKDGNYTSRQ 388 >UniRef50_A0LIW6 Extracellular ligand-binding receptor n=5 Tax=Deltaproteobacteria RepID=A0LIW6_SYNFM Length = 385 Score = 299 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 88/379 (23%), Positives = 153/379 (40%), Gaps = 17/379 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAM--ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M K++ +I L + A + K+ + +++GP + GD E AI +INA Sbjct: 5 MSLIGKSLAVLLIGLLVVPAAAWCKEPYKIGGLFSVTGPSSFLGDPEKKSLELAIDEINA 64 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 +GGI G L V YD DP + A+K++ D + +IG + +T + E + + Sbjct: 65 RGGIDGHLLEAVIYDTEGDPGKTNLNASKLMTKDNVIAIIGPSLTPTTLAIVPLAEKQPV 124 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 +IS A +T+ + +TA D ++ + +++ II + YGE Sbjct: 125 PLIS-CAAGILITEPVKPWVFKTAQSDVLAVAAIYGHM-QKKNIKKVGIITVESAYGESG 182 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 + VV + A + D +A + +++ + V G P + R + Sbjct: 183 RDQLTAQAPKFGIQVVQAETFGAKDTDMTAQLTKVRSAQPEAVICWGTNPGPAVIARNFQ 242 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGM------LVTMPKRYDQDPA---NQGIVDAL 288 +G K GV + +AG+AAE + ++ + D DP + V+ Sbjct: 243 QMGFKIPLYQSHGVASPKFVELAGEAAENIVLPAGKILVTDQLPDSDPQKAVLKRYVEQF 302 Query: 289 KADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDE-K 346 K P P+ Y A+ LA ALE T A+ K ++ G V G N+ Sbjct: 303 TGRFKQPVSPFGGYAYDAMMILAKALEGTEGK-KDAVRKRIEEVRGLVGVTGTFNFSPQD 361 Query: 347 GDLKGFDFGVFQWHADGSS 365 + G D V +G Sbjct: 362 HNGLGPDAFVMVQIQNGKF 380 >UniRef50_A8IHA6 ABC-type branched-chain amino acid transport systems n=2 Tax=Proteobacteria RepID=A8IHA6_AZOC5 Length = 390 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 6/351 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 + + +K+ +G +SG AQ G NG + A+ NA G K+ V DDA + Sbjct: 41 APAKAQETVKLGFIGPLSGGNAQQGLAARNGFQLAVDQANAAG--LPFKIEPVILDDAAN 98 Query: 78 PKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 P+ V+ A K+ ND + GH S ++ G+ + GA +P++T++ Sbjct: 99 PQTGVSAALKLTNDPKVVAATGHWNSGVALATIPVFSRAGVPFVIWGAISPKITEKNNPM 158 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 + R + AK+ + +RIAI+ D YG + + +A ++ + Sbjct: 159 VSRVVTTLVNTNAPLAKWAAANIG-KRIAIVSDTSDYGAANLDNFKKFFEADGGTIIAAE 217 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 G DF AL+ ++K N D +Y+GG E G + +Q +G+ +G +G + Sbjct: 218 SAPVGTTDFRALLTKIKAANPDAIYFGGVVAEAGLVRQQMAQLGMTQPMIGVDGFYDQEF 277 Query: 257 SNIAGDAAEGMLVTMPKRYDQDPANQGIVDALK-ADKKDPSGPYVWITYAAVQSLATALE 315 IAG AA G +V + K +P + +A K A+ +P G Y Y A + AL+ Sbjct: 278 IKIAGPAATGTIVGIAKEVG-NPKLDAMTEAYKGANFAEPVGSYTKNAYDATNIIIEALK 336 Query: 316 RTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 G+ + A+ K ++A + +G ++DE G K + DG+ Sbjct: 337 TAGTKDKAAIAKAIRAIDYDGAMGRTSFDENGQTKRAVVLELREVKDGAWV 387 >UniRef50_C7H459 High affinity branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H459_9FIRM Length = 407 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 21/356 (5%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ V+G ++G ++ +G NGA +K +NA GGI G ++ + D+ D QAV Sbjct: 51 DTIKIGVMGPLTGNVSVYGQAVVNGASLYLKQVNADGGINGKQIEILTEDEQGDATQAVN 110 Query: 84 VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL-----TQRGYQHIM 138 K+V++GI ++G + ++ T + D + M++ AT + T +++ Sbjct: 111 CFTKMVDEGITALVGDVTTTPTLAVAAESADYNMPMVTASATAEAVTYDAETDTVNENVF 170 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDG 197 R D QG A Y + + + A+I K Y EGLA + + ++ +V + Sbjct: 171 RATFTDPFQGIKMADYAYQKLGYTKAAVIFKKGADYNEGLAENFVNEFESLGGTIVDQES 230 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 + G+ DF + + + + V+ YY E+GQ+L QA SVGL F+G +G Sbjct: 231 YSEGDVDFKTQLTSILGKGPETVFCPNYYEEVGQILSQAESVGLNVPFLGGDGWDGLEGY 290 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP-SGPYVWITYAAVQSLATALER 316 A D + P DA KA+ + + + Y A +++ ++ Sbjct: 291 ATA-DQLKDSYFCANYAKGSSP---EFEDAYKAEYGEDYPNGFAPLGYDAAKTVVYGVQA 346 Query: 317 -------TGSDE-PLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGS 364 G+DE A+ + + + G +DE D + DG Sbjct: 347 AEDAGLEAGTDEYKQAVNDAIASGTIEGITGTFTFDEHHDPVKKTAILTYV--DGK 400 >UniRef50_B0PGR3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGR3_9FIRM Length = 411 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 89/335 (26%), Positives = 138/335 (41%), Gaps = 5/335 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 A +I + A++G G G A+++INA GG+ G KLV DD Sbjct: 55 GTAATDGEILFGLSCALTGNFPLAGQRTREGIDLALEEINANGGVLGKKLVYTIEDDQNT 114 Query: 78 PKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 AV V KI+ + VIG S + +++Y + G+ ++ G T+P+L + ++ Sbjct: 115 QTTAVNVVTKILTQDVAAVIGPHTSGNAMATNELYRNAGVPFLT-GGTSPKLEEAQNPYM 173 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 R D+ G AAKY +ET+ ++I I + +G G + L+ A V G Sbjct: 174 FRCRPADTINGQVAAKYAIETLGAKKIGISFNNNDFGTGGRDVIIAYLEEAGVPYVA-VG 232 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 AG+KD + I +LK E +D + E+ RQ +G+ + GV + Sbjct: 233 HNAGDKDLTGQIMQLKGEGVDCIISWTDDAEVALTARQLYELGVDVPVIASAGVVMDQVL 292 Query: 258 NIA-GDAAEGMLVTMPKRYDQDPAN-QGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 N+ + EG D A Y Y+A LA A+E Sbjct: 293 NLLEPEYVEGWYSVTDFVSTSDEAVTAEFTKKFTDKYGYAPELYAATYYSATYVLADAIE 352 Query: 316 RTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDL 349 R GS +P A+ L A G DE G+L Sbjct: 353 RAGSADPQAVRDALAATDGLVLPEGSYKCDENGNL 387 >UniRef50_A9KNN4 Extracellular ligand-binding receptor n=4 Tax=Firmicutes RepID=A9KNN4_CLOPH Length = 386 Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 87/386 (22%), Positives = 169/386 (43%), Gaps = 23/386 (5%) Query: 1 MKR----NAKTIIAGMIALAISHTA-----------MADDIKVAVVGAMSGPIAQWGDME 45 M++ + ++ +++ A+ IK+AV G M+G A++G Sbjct: 1 MRKLKRVFGLISLVAIVVSSMTGCGNKGKTTSGDSSSAETIKIAVAGPMTGDNAEYGIGF 60 Query: 46 FNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSS 104 N A+ + N KGG+ G ++ V+YDD ++A +A KIV++G I VIGH S Sbjct: 61 TNAAKMMADEWNKKGGVLGKQIKIVQYDDKNSSEEAATIAQKIVSEGDIAGVIGHFSSGV 120 Query: 105 TQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRI 164 A+ IY++ ++ ISP A++P+ + G +I R + S++ + + + ++I Sbjct: 121 CLTAAPIYQENKLVEISPSASHPDYSLVG-DYIFRNNTVISAEAAASIDIAVNDLGKKKI 179 Query: 165 AIIHDKQQYGEGLARSVQDGLKAANAN---VVFFDGITAGEKDFSALIARLKKENIDFVY 221 II K +G ++ +++ ++ + +V + + G D+S I +L + D V Sbjct: 180 GIISIKTDWGTNTSKIIKELVEKLGIDGVSIVAHEEVVEGSDDYSPAITKLNQAGADVVI 239 Query: 222 YGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLV-TMPKRYDQDPA 280 G Y + + +Q + + + +G + L + G A EG+ + +D Sbjct: 240 CAGMYNLVAPVAKQYKQINPDIKVVGFSNSYSQQLIELGGLAIEGVCFPVIFFSESKDEK 299 Query: 281 NQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGP 340 + V A + + + Y +V L +A+E+ GS + A+ L V G Sbjct: 300 IKNYVSAFEKEFGNKPSALTSQAYDSVGMLLSAIEKAGSTDKEAVRNALAEVDYEGVTGQ 359 Query: 341 LNWDEKGDLKGFDFGVFQWHADGSST 366 +DE G++ V G Sbjct: 360 TKFDENGNVNKQFVKV--TIQGGKFV 383 >UniRef50_B9M5M6 Extracellular ligand-binding receptor n=1 Tax=Geobacter sp. FRC-32 RepID=B9M5M6_GEOSF Length = 372 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 76/373 (20%), Positives = 149/373 (39%), Gaps = 13/373 (3%) Query: 1 MKRN----AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDI 56 M R ++I + AL ++ I + G ++G A G +G A+++I Sbjct: 1 MARRFFPQLISMILLLTALVLTGCRDKKPIYLGYAGPLTGKFADLGIAGRDGVVLAVEEI 60 Query: 57 NAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 NA GGI G ++ + DDA DP+QA V ++V+ G VIGH+ S + + Sbjct: 61 NAGGGIAGREIELLSKDDAQDPQQAQKVDQELVDAGAVAVIGHMTSVMSVAGLPVVNRAH 120 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD--KQQYG 174 ++M+SP ++ +LT + +R S + + +E + + I++++D + + Sbjct: 121 LVMLSPTTSSNDLTGID-DYFLRVYPPSSQVAHLLSTHAIEKLDIRSISVVYDISNEAHT 179 Query: 175 EGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR 234 G + ++ + +V G+ DFS L ++K ++ + + + Sbjct: 180 LGWYKYFRENHQRLGGRIVQEFPFKGGKADFSHLAEQIKAGGSQGLFIIAGAMDTAMICQ 239 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKK 293 R G + E L + G A EG+ + D PA + + Sbjct: 240 HLRRSGFGMPIVVSEWSTTDELLSQGGTAVEGINFYQTFDRNSDQPAYVAFRKNYRERFR 299 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGF 352 Y + + + +AL R +P L + + + N + + D GD K Sbjct: 300 REPTFASVHAYDSAKLVFSALTR--DSDPKKLKQTILSMANFNGLQDQIMIDRFGDPKRT 357 Query: 353 DFGVFQWHADGSS 365 F + +G+ Sbjct: 358 PFLM--VIKNGTF 368 >UniRef50_A8SAA0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAA0_9FIRM Length = 403 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 88/354 (24%), Positives = 147/354 (41%), Gaps = 21/354 (5%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 IKV V+G ++G + +G NGA +K +NA GG+ G +L + D+ D QAV Sbjct: 49 IKVGVMGPLTGDASVYGQAVVNGANLYMKQVNADGGVNGKQLEIIAMDEQGDETQAVTCF 108 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL-----TQRGYQHIMRT 140 K+V+ GI ++G + ++ T + D + M++ AT + T ++ R Sbjct: 109 TKMVDQGITALVGDVTTAPTLAVAAESADYNMPMVTASATAEAVTYDAETDTVNGNVFRA 168 Query: 141 AGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEGLARSVQDGLKAANANVVFFDGIT 199 D QG A Y E + + A+I K Y EGLA + +A VV + + Sbjct: 169 CFTDPFQGVKMADYAYEKLGYTKAAVIFLKGKDYNEGLAENFAKEFEAKGGTVVDQESYS 228 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNI 259 G+ DF + + +N + V+ YY E+GQ+L QA S+GL F+G +G Sbjct: 229 EGDVDFKTQLTSILGKNPEMVFCPNYYQEVGQILAQAESIGLTVPFLGGDGWDGLEGYAT 288 Query: 260 AGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP-SGPYVWITYAAVQSLATALER-- 316 A D + DA KA+ + + + Y A ++ ++ Sbjct: 289 A-DQLKDSYFCACYAKGSST---AFEDAYKAEYGEAYPNGFAPLGYDAAMTVVYGIKAAE 344 Query: 317 -----TGSDE-PLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGS 364 GSDE A++ + + G +DE + + DG Sbjct: 345 EQGLEAGSDEYKQAVIDAIAGGTIEGITGTFTFDEHHNPVKSTAILTYV--DGK 396 >UniRef50_A5CZW6 ABC-type branched-chain amino acid transport systems, periplasmic component n=3 Tax=Peptococcaceae RepID=A5CZW6_PELTS Length = 402 Score = 297 bits (761), Expect = 6e-79, Method: Composition-based stats. Identities = 91/390 (23%), Positives = 159/390 (40%), Gaps = 29/390 (7%) Query: 1 MK---RNAKTIIAGMIALAISHT---------------AMADDIKVAVVGAMSGPIAQWG 42 MK + I + L + + D +K+ +G SG G Sbjct: 1 MKIQHKYLLIFIMLLTVLILPGCETGATQKEVSKQPGHGVEDTVKIGFLGNKSG---YGG 57 Query: 43 DMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCS 102 G R A+ DIN GG+ G K+ +E D + + V V +V+ +IG + Sbjct: 58 SECLKGIRMAVDDINRTGGLLGKKVELMEGDHGGNSSETVRVTQSLVDRKAAVIIGDNTT 117 Query: 103 SSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQ 162 T+ A+ + +D +++ISP A+ + + G ++I R A LDS P +Y+ +T++ + Sbjct: 118 GITKLAATVCQDNNVVLISPTASGSGVVEMG-EYIFRIALLDSVAVPAVVRYLADTLEWK 176 Query: 163 RIAII-HDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVY 221 ++A++ + + Y EGLA + L + +V I + DFSA +A LK+ + D + Sbjct: 177 KVALVKNIGRSYTEGLAAIFKPALVRSGIEIVNEQKIRKNDTDFSAQVAALKQSSFDGLV 236 Query: 222 YGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ---D 278 + G E +++ R GL+ +G +G+ L G EG L D Sbjct: 237 FPGNNVEAYLFIKEMRKQGLRQAVVGGDGMYTRELIENGGIDVEGTLTYAGFAVDPESAS 296 Query: 279 PANQGIVDALKADKKD-PSGPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANT 336 P V+ +A + + Y AV A A+ GS EP + L + Sbjct: 297 PETMEFVEKYRAVNNNLTPDVFAAQAYDAVNLAADAIRAAGSAEPAKFKEKLARTKNWRG 356 Query: 337 VIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 V G +D + + + G Sbjct: 357 VSGTTTFDRDREPVKSPLYLMEVKE-GRFV 385 >UniRef50_A8UX91 ABC transporter substrate-binding protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UX91_9AQUI Length = 368 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 80/371 (21%), Positives = 149/371 (40%), Gaps = 16/371 (4%) Query: 1 MKRNAKTIIAGMIALAISHT--AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M++ + I L + +K+ V+ ++GP A WG GA A++++ Sbjct: 1 MRKERLLTVLLFIFLFLISCEKQSEQTLKIGVLTPLTGPGALWGKNTLKGAELAVEELRK 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 + G + V D P + V K++ D I ++I SS +I + + Sbjct: 61 Q----GANIKLVVEDSKGSPLEGVKALQKMITLDRIDFLIDDAVSSVALAIVNILTQKKL 116 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 + +S G+TNP+L+ + R D+ + AKY L + +I+ + YGEGL Sbjct: 117 VCLSTGSTNPKLSGA-SPYFFRLWNSDAEEASVIAKYALRR-GFRAAYVIYIRNDYGEGL 174 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKK---ENIDFVYYGGYYPEMGQMLR 234 AR ++ ++ + G +F I+++K N F+Y GY E+ ++ Sbjct: 175 ARKFREVFVKNGGEILLENSFAPGTSNFQYFISKIKNVHKANKSFIYIIGYPREIPSLIV 234 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKD 294 Q R ++ G ++S+ AG EG++ PK + + + Sbjct: 235 QIRKSNVQIPIFGTAAFEDSSILARAGKYMEGVIYPYPKVV-VTAKREHFEKVYEKKYGE 293 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 G Y AV L A ++ G + + + L G +++DE GD+ Sbjct: 294 KPGSPAAEAYDAVYILYKAYKKVG-TDADKVREFLLNLRYEGASGYIDFDEFGDVHKP-- 350 Query: 355 GVFQWHADGSS 365 V + +G Sbjct: 351 FVIKTVRNGEF 361 >UniRef50_B9L7B1 High affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=2 Tax=Nautiliaceae RepID=B9L7B1_NAUPA Length = 379 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 22/383 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ ++A ++ ++ T A +IKV V+ ++GPIA +G +G + + N Sbjct: 1 MKKK---LLALGLSALVASTLAAKEIKVGVLQPLTGPIASFGQKTLDGIKLVHEKYNTLP 57 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GDK+V V D D Q V ++V+ + + V G L SS + Sbjct: 58 --NGDKIVLVVVDGQFDKVQTVNGYKRLVSGEKVVAVEGPLASSMSLSIKRFAGATKTPT 115 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLA 178 ++ ATNP +T +G ++I R D QG AAKY L+ + I+ D KQ Y GLA Sbjct: 116 VTQIATNPRVT-KGSKYITRACFTDDFQGTVAAKYALKH-NLKTAVIVFDMKQDYSVGLA 173 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 ++ + K V+ I +G+KDF+A +A++KK N DF+Y Y PE G ++RQ R+ Sbjct: 174 KAFEKAYKKDGGKVLKKLFINSGDKDFNAQVAQIKKLNPDFIYTPIYAPEEGLLVRQLRA 233 Query: 239 VGLKTQFMGPEGVGNASLS-NIAGDAAEGMLVTMPKRY--DQDPANQGIVDALKADKKDP 295 G+ + MG +G+ + +L +AG AA G++ T P ++ + KA Sbjct: 234 AGVNSPVMGGDGIADPALLKKLAGKAANGVMYTDHFDPAKAPTPLSKEFIKDFKAKYGRS 293 Query: 296 SGPYVWITYAAVQSLATALE----RTGSDE---PLALVKDLK-ANGANTVIGPLNWDEK- 346 + + A++ + + L+ V G L D K Sbjct: 294 PSAFAATGADGYLLIYNAIKQCDTKANKTNLQFKQCINDALRHTKNLEAVTGYLTIDPKT 353 Query: 347 GDLKGFDFGVFQWHADGSSTAAK 369 G+ V + DG + Sbjct: 354 GNPINKPAVVEEIV-DGKVVFKE 375 >UniRef50_A0LQN2 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LQN2_SYNFM Length = 393 Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats. Identities = 70/393 (17%), Positives = 139/393 (35%), Gaps = 27/393 (6%) Query: 1 MKRNAKTIIAGMIALAISHT-----------AMADDIKVAVVGAMSGPIAQWGDMEFNGA 49 MK+ + A + A + K+ V +++G + G+ E A Sbjct: 1 MKKRRNWLAAALTICTFLGALFAPIIGPNVLAAPEPYKIGAVFSITGVGSFLGEPEKKTA 60 Query: 50 RQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPA 108 +IN +GGI G + + YDD D + K++ D + +IG S + Sbjct: 61 EMIRDEINKQGGINGHPVELIIYDDESDTTKCTLAVKKLIKKDEVPVIIGPTRSGESIAV 120 Query: 109 SDIYEDEGILMISPGATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII 167 + + E+ + +IS + +T + + + AG D+ Y+ + +++AI+ Sbjct: 121 ATVAEESKVPLISCATSYKIVTPIESRKWVYKVAGSDAHVVGKMYDYM-KGKGVKKVAIM 179 Query: 168 HDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYP 227 D YG + +V + + D +A + +++ V P Sbjct: 180 TDSSGYGASGREELLRLAPEYGFTIVADERFDPKDTDLTAQMTKIRGTQPQAVVNWSIGP 239 Query: 228 EMGQMLRQARSVGLKT-QFMGPEGVGNASLSNIAGDAAEGMLV------TMPKRYDQDPA 280 ++ R +G+ G G+ +AG AAEG+L+ D P Sbjct: 240 TQILAIKTWRDLGMDAIPLFQSHGFGSLKNLELAGKAAEGVLLPLARVNVGSLLPDSQPQ 299 Query: 281 NQ---GIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANT 336 + A + K+P + + ++ AL+ G +P + ++ G Sbjct: 300 KKIILEYTRAYETLYKEPISSFGGHAWDSMHLAMAALKAVGP-DPAKIRDHIEQTKGFVG 358 Query: 337 VIGPLNWDEKGDL-KGFDFGVFQWHADGSSTAA 368 + G N+ + D DG A Sbjct: 359 MHGIFNFSPQDHCGLSKDDLEMIVVKDGKWALA 391 >UniRef50_A7HAB6 Extracellular ligand-binding receptor n=8 Tax=Bacteria RepID=A7HAB6_ANADF Length = 402 Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 72/372 (19%), Positives = 153/372 (41%), Gaps = 12/372 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ +A + +K+ + +++GP A G+ NG A++D+ KG Sbjct: 21 MKKMLAPALAALSLALPGAGQAQ--VKIGFINSITGPEAPIGENLTNGVDMAVEDLKKKG 78 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILM 119 + + ++ DD P+ +++ ++ D + V+G S++ + + + Sbjct: 79 -VN---VQLIKQDDTGKPQVSMSAMEQLATGDEVAAVVGPYTSATANAVAKLANQYKVPQ 134 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 + P A E+T++GY + R + LE KP+ IA I++ +G +A Sbjct: 135 VVPAAAKEEITRQGYDWVFRLNAPAHQYAQSLLDAALEFGKPKTIAFIYESTDFGTSVAT 194 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + +D + VV + G D+ + + ++K N D V+ Y + ++RQ+R V Sbjct: 195 AGKDYAQKKGLKVVGDEAYQKGAPDYRSTLTKVKAANPDLVFMVSYVADAILLMRQSREV 254 Query: 240 GLKTQ-FMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP 298 GLK Q F+G + + D + + + P + + + Sbjct: 255 GLKPQAFLGGGAGFDTAQFESEKDISNLVFSVTQWTPESTPGAEEFANRYRQKYGKKPTY 314 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEK---GDLKGFDFG 355 + YAA+ + A ++ G + + ++LKA ++G +++ + + Sbjct: 315 HAACAYAAMMVVGEAAQKAGG-DRKKIQEELKAGKWTGIMGEVDFQDYEGFTNQNKLIMP 373 Query: 356 VFQWHADGSSTA 367 V Q+ S T Sbjct: 374 VIQYQGGKSVTV 385 >UniRef50_UPI00016BFE10 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFE10 Length = 384 Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 82/367 (22%), Positives = 156/367 (42%), Gaps = 11/367 (2%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 + + M+ + A+ IK+ ++G AQ+G GA AIK+ N GG+ Sbjct: 11 ILLGLGSSMLVACGGDESGANTIKIGGSFDVTGATAQYGIPANKGAILAIKEYNEAGGVL 70 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G ++ + D+ A + K+ + + IG S +T+ +++ + +GI MISP Sbjct: 71 GKQIEYIFEDNKGVQTDAASAYKKLSDSKDVIGFIGADISGTTETIANLAKXDGIPMISP 130 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSV 181 AT E+T +I R +D +QG A + ++ + A++ + Y G+A + Sbjct: 131 SATKKEITSI-APNIFRACYIDPTQGEILANFADTSLNAKTAAVMINNESDYSVGIAEAF 189 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + ++A +VV TA + DF +++A + N D + YY + ++ QAR +G+ Sbjct: 190 IEQVEALGIDVVAQVNYTAADVDFKSILAPVANANPDVILIPDYYEAVAKIAPQAREIGI 249 Query: 242 KTQFMGPEGVGNASLSNIAGDAAE---GMLVTMPKRYDQD-PANQGIVDALKADKKDPSG 297 F+G +G ++ + G AE G + D P Q + + Sbjct: 250 SGTFLGGDGWDG--VTAMVGTNAEPINGSYFINHYTTEDDSPIVQDFIANYTEEYGTTPN 307 Query: 298 PYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVF 357 + + A L R + + A+V ++ V G + +DE + + V Sbjct: 308 AFAALGXDAACILLEGFARAETTDSSAVVNAIQNIDIEAVTGHITFDENRNPQKS-VTVI 366 Query: 358 QWHADGS 364 + DG Sbjct: 367 KIV-DGQ 372 >UniRef50_A8R9T6 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R9T6_9FIRM Length = 396 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 82/370 (22%), Positives = 160/370 (43%), Gaps = 16/370 (4%) Query: 2 KRNAKTIIAGMIALAISHTAM--------ADDIKVAVVGAMSGPIAQWGDMEFNGARQAI 53 K+ +AL + I++ + ++G +A +G E+NGA+ AI Sbjct: 11 KKLVAMTAVSCMALTTLAGCGDGGSGGGDENTIRIGMNFELTGNVANYGTTEYNGAKLAI 70 Query: 54 KDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIY 112 K N K VE D+ ++A A+A K+ +DG+ ++G S ++ + Sbjct: 71 KQANENSE-HKFKYEIVEGDNKSAAEEATALATKLATSDGVDGMVGPATSGNSLATYQVA 129 Query: 113 EDEGILMISPGATNPELT---QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD 169 D +L++SP AT T + Y ++ R D++QG + + + ++ A++ D Sbjct: 130 NDSKVLVVSPSATANGATMNNGKVYDYVYRVCFEDNTQGAAMGVFAYDNLGKRKAAMLSD 189 Query: 170 K-QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPE 228 Y +G+A+S + K +V + DF+ + ++K + D +Y GYY E Sbjct: 190 SSNDYAKGMAKSFKKKFKEKGGEIVTELNYAEKDTDFNVQLTKIKDMDFDVLYIPGYYNE 249 Query: 229 MGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPKRY-DQDPANQGIVD 286 +G +++QARS+G+ +G +G ++ L +AG + + T + ++ Sbjct: 250 VGLIIKQARSLGIDVPIIGGDGFDSSDLVKLAGAENLNDVYFTTAYTTVNASDELTAFIE 309 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEK 346 A K + + + + Y A + A E+ G + A + L + N V G +D+ Sbjct: 310 AYKEEYGEEPSMFSALAYDATNVMIEAYEKAGKKDMDAAKEALDSMKFNGVTGSFTFDKT 369 Query: 347 GDLKGFDFGV 356 V Sbjct: 370 HTPTKDVLVV 379 >UniRef50_B8IDJ0 Extracellular ligand-binding receptor n=4 Tax=Rhizobiales RepID=B8IDJ0_METNO Length = 388 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 82/359 (22%), Positives = 153/359 (42%), Gaps = 13/359 (3%) Query: 2 KRNAKTIIAGMIALAISHTA---------MADDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 +R A + +++ +++ +V ++GP A G NGA+ A Sbjct: 5 RRVFLGGAASAVIGSMAGPGLIRSACAQGAGSTVRIGMVLPVTGPGADAGRFALNGAKLA 64 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDI 111 ++ +N GG+ G L V DD AV +K+ + + +G + S+ + Sbjct: 65 LEAVNKAGGVLGKPLEIVTEDDQTTNPGAVLAFSKLASQSDLVGFLGSIRSTQNHAMAPD 124 Query: 112 YEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ 171 G + G T+P LTQ G + R DS A + + T+ ++ A+IH Sbjct: 125 ILKTGKP-VCFGGTDPVLTQMGNPWLFRFRPNDSYSARVIADFGINTLAKKKWAVIHSTD 183 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFV-YYGGYYPEMG 230 +G A+++ + L A+A+V G + +DF+ ++ +++ + + Y + ++G Sbjct: 184 AFGTSGAKALTEALGKASASVALDQGYSNQSQDFTPVVLAIRQSGAEIIGSYFTFENDLG 243 Query: 231 QMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKA 290 RQ R +G+ ++G + N + +AG + G D A + A +A Sbjct: 244 IFARQLRQLGVTVPWVGSPSITNVTALKLAGPSLYGTYGVADYAEDSSEAARAFGKAYRA 303 Query: 291 DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGD 348 K TY AV LA A+ + G +P A+ + L + G G N+D+ GD Sbjct: 304 ATKIAPDNQSSWTYDAVTVLALAINKAGKTDPQAIREALLSVRGHEGAEGTYNFDKNGD 362 >UniRef50_C4XNN1 Putative ABC transporter substrate binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNN1_DESMR Length = 391 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 92/371 (24%), Positives = 159/371 (42%), Gaps = 16/371 (4%) Query: 1 MKRNAKTIIAGMIA--------LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQA 52 M R+A I +A LA + + + +AV+ A SG + G A Sbjct: 1 MHRSALLGIGLFLAMVMLLIPVLAGPAKSGSTAVHLAVIAATSGMASVHNQASLRGLYLA 60 Query: 53 IKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIY 112 IN++GG G L D+ + A + V G+ V+G + SS + A+ + Sbjct: 61 AAKINSRGGCLGSPLELTVLDNQSTSLGSRRAAQEAVRLGVAAVLGPIWSSHSLAAAPVL 120 Query: 113 EDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH-DKQ 171 + GI MI+P +TN +TQ G HI RT D QG A++ E + A++ + Sbjct: 121 QAAGIPMITPLSTNTRVTQVG-DHIFRTCFTDDFQGRVMARFARERLNAATCAVLASADE 179 Query: 172 QYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ 231 Y +GLA+ + AA VV+ A DF+ +A++++ + + ++ GY ++G Sbjct: 180 DYSQGLAKVFAEEFMAAGGKVVYTADYRAKSLDFTPQLAQVQRLDPNVIFVPGYGLDVGL 239 Query: 232 MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKA 290 ++RQARS+G+ T F+G + + +I G EG + D N + Sbjct: 240 IIRQARSLGINTVFLGGDAWSDLYDHDIQG--LEGNYYSTFWHPDLPVSGNASVRQDFLE 297 Query: 291 DKKDPS--GPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKG 347 + Y A+ + A+ER GS +P + + L V G + +D Sbjct: 298 ASGSHLRDSMDTAMAYDALLLVVEAIERAGSTQPALIRQALADTSSFVGVTGSIAFDASR 357 Query: 348 DLKGFDFGVFQ 358 + G + + Sbjct: 358 NPVGRGAVILK 368 >UniRef50_C0ZKD9 Probable branched-chain amino acid ABC transporter substrate binding protein n=2 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZKD9_BREBN Length = 409 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 100/363 (27%), Positives = 170/363 (46%), Gaps = 9/363 (2%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDA 75 + T IK+A +SG + GD GA A++ + G L DD Sbjct: 45 SGGGTTEGGLIKIATQSPLSGSNSAIGDAIKTGAGYALEKRKEEFKALGFDLQLFPQDDQ 104 Query: 76 CDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 DPK V+ A +++D + V+GH + P+S Y++ ++M+SP T +LT+ G Sbjct: 105 GDPKIGVSNAEMLISDPDVYGVVGHYNTGVAIPSSVKYDEGKLVMVSPANTGVKLTEEGK 164 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + + R D +QGP AA Y T+ + IIHDK YG+GL+ V+ + ++ Sbjct: 165 KTVHRICARDDAQGPKAALYAKTTLGVKTAYIIHDKTAYGQGLSDQVKMQFEKDGVQILG 224 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 F+GIT GEKD+SA++ ++ +N D +++GG YPE G +++QAR G K FMG +G+ ++ Sbjct: 225 FEGITQGEKDYSAVLNQVTVKNPDIIFFGGLYPEGGILIKQAREKGFKGYFMGGDGLDSS 284 Query: 255 SLSNIAGDAAEGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 + IAG+A EG++ T Q + + K P Y + ++ + Sbjct: 285 DMIKIAGNAVEGVVFTSVAGDVTQTEEGKKWAEEYKKATNKPLETYSVYGFDSMNVILNG 344 Query: 314 LERT------GSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 + ++ + + +DEKGD D ++++ D S Sbjct: 345 VLEAAKANGGKKPTREQVLDAVHKTKDFQGQFTKVTFDEKGDNTNADVFIYKFAKDKSIF 404 Query: 367 AAK 369 K Sbjct: 405 VGK 407 >UniRef50_B2T1G8 Extracellular ligand-binding receptor n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T1G8_BURPP Length = 387 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 100/375 (26%), Positives = 174/375 (46%), Gaps = 8/375 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 +KR A +I + L D +++ ++GP A G N AR AI+D NA Sbjct: 8 LKRFAGGVIFSIATLWCQGAQSEDAAVVRIGFAAPLTGPSAADGKEMKNAARLAIEDANA 67 Query: 59 KGGIKGDK---LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDE 115 + G++ DD DP+ A VA + V+ + V+GH S + AS++Y+D Sbjct: 68 RHPKIGERTVSFELAPLDDQADPRVASQVAQRFVDMSVAGVVGHFNSGCSIAASNVYDDA 127 Query: 116 GILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 I +SP +T+ T RG + R G D+ G +Y++E + +R+AI+ D+ +G Sbjct: 128 QIAQVSPSSTSAIYTLRGKKSSFRVVGQDAVAGAELGRYLVEDFQARRVAIVDDRTDFGA 187 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GLA V D + + +V + +T DFSA++ R++ +N D V +GG+ + Q++R+ Sbjct: 188 GLADRVSDFIAQRHVAIVAREYVTDKTVDFSAILTRIRSQNADLVVFGGFDAQAAQIVRR 247 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 RS G+K EG NA N+A EG + P + +A K Sbjct: 248 MRSAGMKATL-AGEGFNNAIFLNLARGDGEGTVTIQPGLPLNRMPAKDFASRYEARYKAK 306 Query: 296 SGPY-VWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 + Y A + A+ S + +++ ++ + + GP+ +D+ GDL + Sbjct: 307 LEGFQAPYAYDATSVIVQAVLAAQSARAVDVLQAVRKTNMDGLTGPIAFDKNGDLAAAPY 366 Query: 355 GVFQWHADGSSTAAK 369 +++ G T K Sbjct: 367 TIYRLT-GGRWTDKK 380 >UniRef50_C0Z561 ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z561_BREBN Length = 395 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 79/378 (20%), Positives = 147/378 (38%), Gaps = 16/378 (4%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 +A A A + A D IKV + +++GP + G E +K+IN GG+ Sbjct: 22 SACGGGATPAAESGPGGASKDPIKVGAIFSLTGPNSPLGVPEKQAVELLVKEINGAGGVD 81 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G ++ + DD D +AV K+ + + + V+G S + ++ E + +IS Sbjct: 82 GRQVEIIFEDDKSDNTEAVKAIKKLASKEKVVAVLGSSGSGPSLGMAEYAAAEKLPLISM 141 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 A ++T +I +T D KY+ E +IA ++D YG G +Q Sbjct: 142 AA-ADQITNPVRANIYKTPHTDVHGTKRIFKYLKEK-GITKIATLNDSNPYGSGWTTQLQ 199 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 +V + + S+ + ++K + + G P ++++A+ + L Sbjct: 200 KYAPEYGITIVAEEKYGTKDPSMSSQLTKIKGTDAQALIVAGTNPGPATIVKEAKQLNLT 259 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMP------KRYDQDPAN---QGIVDALKADKK 293 + G N+ + GDA EG+L+ + DP + + VD +A Sbjct: 260 IPIISSHGSANSKFLELIGDAGEGVLMVAGKLLIPEQVAADDPQSAIIKKFVDGYQAAYN 319 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW--DEKGDLKG 351 + Y + L L++ GS + L + L+ V G + D+ L Sbjct: 320 THPDGFAGYGYDGLNLLVEGLKQAGS-DTSKLGEVLEKVKYVGVTGEFKFTADDHNGLTE 378 Query: 352 FDFGVFQWHADGSSTAAK 369 + + DG K Sbjct: 379 DSMIMVEVK-DGKFQLVK 395 >UniRef50_Q2T506 Amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=24 Tax=Proteobacteria RepID=Q2T506_BURTA Length = 408 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 95/355 (26%), Positives = 162/355 (45%), Gaps = 5/355 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN-AKGGIKGDKL--VGVEYDD 74 + + + + + ++GP+A+ G NGA+ A+ D N + + G + V DD Sbjct: 21 TGRSAPQTVLIGLAAPLTGPLARIGKDLQNGAQLALDDANSRRPTLGGKPVVYRLVAVDD 80 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 DP+ AV VA ++V + V+GH + + PAS IY D GI I+P T + T++GY Sbjct: 81 QSDPRAAVTVAQRLVERRVIGVVGHWNTGCSVPASRIYRDAGIAQIAPALTGRQYTRQGY 140 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 R G D + G A Y+++T+ +RIA+I D+ +G GLA G+ A +V Sbjct: 141 PTAFRIVGHDDASGAHAGAYVVKTLGAKRIAVIDDRTAFGAGLADQFVKGVDANGGAIVD 200 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + DFSA++ +K + D V++GG + + R+ R + L +G G Sbjct: 201 RQYVNDKTADFSAVLTAIKAKRADVVFFGGLDAQAAPLARRMRQLTLNATLVGAGGFVTQ 260 Query: 255 SLSNIAGDAAEGMLVTMPKRY-DQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 + ++AG +G+ P + P +A + P + Y +L A Sbjct: 261 TFLSLAGPGGDGVTALEPGLPLARMPGGAAFDARYRARYRAPIELHAPFAYDEAATLIAA 320 Query: 314 LERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 ER S + L L A V G + +D +G+L+ F +++ G A Sbjct: 321 AERADSTDAARLPAVLHALKRQGVTGAIAFDAEGNLRNPAFTIYR-AGGGKWAAV 374 >UniRef50_A7IE58 Extracellular ligand-binding receptor n=3 Tax=Proteobacteria RepID=A7IE58_XANP2 Length = 381 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 77/383 (20%), Positives = 141/383 (36%), Gaps = 16/383 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M TI A +IA +S AD IK+ + SG +A G GA A++ IN G Sbjct: 1 MLPLRPTIAALLIAAGLSAAHAADPIKIGGLLETSGAVASLGQPGLEGAMLAVEQINKTG 60 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILM 119 GI G + V + D +AV +++ G I ++G + S S+ D + + M Sbjct: 61 GINGQPVEFVNVNTESDNTRAVTAVKRLIGQGDIAAIVGPMNSGSSFAIIDTVQRASVPM 120 Query: 120 ISPGAT-NPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 IS G + N L + I + D + + + RIA+++ +G Sbjct: 121 ISNGGSRNIVLPAEEKKWIFLSPLTDVLVQSVMMEDM-KKRGITRIALLNADSPFGTSGR 179 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 ++ + VV ++D + + +++ + V P +++ R Sbjct: 180 EQLEKNAASYGITVVSQQAFGNADQDMTPQLTKVRGTDAQAVVVWATGPGQAIVVKNYRQ 239 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGM------LVTMPKRYDQDPANQ---GIVDALK 289 +G+ + + + +AG AA+G+ + DP + Sbjct: 240 LGIDLPLYLSQAANDFNFLRLAGPAADGIFIPSSKIYVTGALAANDPQKAVIETFAKDYE 299 Query: 290 ADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGD 348 A P + Y AV LA A+++ G+ + A+ ++ V + GD Sbjct: 300 AKYGKPPATFAGNAYDAVMMLAEAVKKAGATDRAAIRGAIEGLKDHVGVTAVYTYGP-GD 358 Query: 349 L--KGFDFGVFQWHADGSSTAAK 369 D V DG + Sbjct: 359 HFGAKADSVVMLTVKDGKFALVR 381 >UniRef50_B8DRY9 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRY9_DESVM Length = 394 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 148/330 (44%), Gaps = 4/330 (1%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 TA+A D+ ++V ++G A++G++ A ++INAKGG+KG KLV D Sbjct: 17 PATALAADLSLSVPLPLTGGQAKFGEIIKKSMEIAAEEINAKGGVKGGKLVLRFEDSQGK 76 Query: 78 PKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 P+ A ++A KI++ + G S+ + + + E+ + + E+TQ+ Y++ Sbjct: 77 PEIARSIAEKIIDVQKQPLLFGEYTSACAKAVAAVAEERKTPYVVVASAADEITQQNYKY 136 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 + R ++ ++ + VKP+ + I+++ +G A + + A V+ + Sbjct: 137 VYRINPTNAYYASGLLSFMDKVVKPKTMVILYESSDFGTSGAEEMAKSAEKAGIKVLMKE 196 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFM--GPEGVGNA 254 G DF +++++K +N D +Y Y + ++RQ + + + + G G Sbjct: 197 KYEKGAVDFKPVLSQVKAQNPDVIYMVSYVMDAALLMRQIKELRIDARLFAGGAAGFAIP 256 Query: 255 SLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 + A DAAE ++ P + + KA D + + Y++V + A Sbjct: 257 EFIDNAKDAAEFVVTATLWSPQVSYPGAREFAEKYKAAHGDYPSYHGALAYSSVYVVKDA 316 Query: 314 LERTGSDEPLALVKDLKANGANTVIGPLNW 343 +ER + + +K T GP+ + Sbjct: 317 VERAKALTTEDINAAMKGVDMMTAFGPVKF 346 >UniRef50_A8ZVT4 Extracellular ligand-binding receptor n=2 Tax=Desulfobacterales RepID=A8ZVT4_DESOH Length = 383 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 76/384 (19%), Positives = 146/384 (38%), Gaps = 19/384 (4%) Query: 1 MKRNAKTIIAGMIALAISHT---AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 MK++ A ++ + + A +DD +V + +++G + G+ E A + IN Sbjct: 1 MKKSILATAAVLVVMLMCGGMLYAASDDYRVGCIFSVTGKASWLGEPEKKTAEMLAEKIN 60 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEG 116 A GGI G KL DD D +AV A K++N D + +IG S +T + ++ Sbjct: 61 AAGGINGHKLKLYIEDDQGDNTRAVNAAKKLINRDKVCAIIGPSVSGATMAILPVMQEAE 120 Query: 117 ILMISPGATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGE 175 I ++S A + + I +T DS ++++ + + + +I +G Sbjct: 121 IPLVSCAAAAVIVEPVAERKWIFKTPQKDSDAVRRIYEHMI-SRGIKDVGLITGTTGFGN 179 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 ++D N+V + + D +A + ++ V P + + Sbjct: 180 AGRTQLKDLAPEYKMNIVADETYGPADTDMTAQLVNIRNAKAQAVINWSIVPAQSIVPKN 239 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPAN---------QGIVD 286 + + + G GN AG+AAEG++ + D + Sbjct: 240 MKQLNMTIPLYQSHGFGNIKYVEAAGEAAEGIIFPAGRLLAVDTLSGDNPQKALLAAYKA 299 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEK 346 +A +P + Y A+ + ALE+ G D+P + ++ G + + Sbjct: 300 EYEARYNEPVSTFGGHAYDALSIVVKALEKAG-DDPAKIRDTIETIEFVGTGGVFKFSAE 358 Query: 347 GDLKGFDFGVFQW--HADGSSTAA 368 D G D F+ DG Sbjct: 359 -DHTGLDKNAFEMLTVKDGKFVVL 381 >UniRef50_C9S1R9 Extracellular ligand-binding receptor n=2 Tax=Geobacillus RepID=C9S1R9_GEOSY Length = 410 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 143/348 (41%), Gaps = 9/348 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ + + +G A + NG + ++ N G + G K+ DD +P+ A+ Sbjct: 49 VKIGFILSQTGTFAPLSEGIVNGFQLYLEQHN--GMLGGKKVEMKVEDDEANPQVALRKY 106 Query: 86 NKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-QRGYQHIMRTAGL 143 ++V + + ++G + S+ D E + ++I A +L+ + ++ R + Sbjct: 107 RQLVHGEKVDILVGPISSAVAYALRDEVEKDKKVLIDANAAGDDLSWSKKSDYVYRVSFS 166 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 + G + AKY+ E V ++ I+ G+ + R+ + +AA V+ Sbjct: 167 NWQNGSSTAKYLAEQVG-KKAVILAPDYPAGKEVLRAFKAAFEAAGGKVLKEIYPKLNTN 225 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT--QFMGPEGVGNASLSNIAG 261 DF+ + E DF+Y + + + Q + GLK GP G+ L+ G Sbjct: 226 DFAPYLQEASAEKPDFIYAFFTGSDGIRFITQYKEFGLKGKIPLTGPLEFGDELLTQPTG 285 Query: 262 DAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 +AAEG++ + + N+ V+A K + Y + ++ A+ + GS Sbjct: 286 EAAEGIIAGINYSPYLDNEQNKQFVEAYKEKYGKLPNIFAVEGYDSAAAIDQAINKAGSL 345 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ-WHADGSSTA 367 L+K LK ++ G + D +F + + DG+ Sbjct: 346 NSQDLIKILKGISLDSPRGKITIDPATHNPIQNFYISKNVLKDGAIVP 393 >UniRef50_A4ISM5 Branched-chain amino acid ABC transporter n=6 Tax=Geobacillus RepID=A4ISM5_GEOTN Length = 389 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 74/369 (20%), Positives = 134/369 (36%), Gaps = 19/369 (5%) Query: 17 ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDAC 76 + + D+IK+ + + SG A G E + ++ N +GGI G K+ + YDD Sbjct: 23 TATSGTEDEIKIGAIFSASGGAAPLGKPEMETVKMLVEQWNKQGGIDGKKIKLIAYDDKS 82 Query: 77 DPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL---TQR 132 + +AV K++ D + +IG S ++ + E GI IS A+ + Sbjct: 83 NQNEAVLSTKKLIEQDKVTALIGGTISGNSLAMIPLIEKAGIPYISLAASKQIVNPSDGS 142 Query: 133 GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANV 192 +TA D ++ E IA ++ YG Sbjct: 143 SRHWTFKTAQGDDIVIQKLLSFLKEK-GWTSIAWLNVANAYGTSGHSEFAHYAPEYGVKA 201 Query: 193 VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVG 252 V + A D A++ R+KK N + G E + + R +G+ + GVG Sbjct: 202 VIEEEFEATVDDAKAMLTRVKKANPQAIVVWGTAQESAVVTKNIRELGIDVPIIESHGVG 261 Query: 253 NASLSNIAGDAAEGMLVTMP------KRYDQDPANQ---GIVDALKADKKDPSGPYVWIT 303 S ++AG+AA G+++ + D DP + + + + Sbjct: 262 TKSFIDLAGEAANGVILPAGRILVADQLPDSDPQKETLLTYKEQFEKTYNYEPTTFGGHA 321 Query: 304 YAAVQSLATALERTGSDEPLALVKDLKA-NGANTVIGPLNW--DEKGDLKGFDFGVFQWH 360 + A L A++ G + + + L+ + G D+ L + Q Sbjct: 322 WDAFHLLMNAIKE-GKTDKENIREALEKTTDFVGISGVFRMSKDDHTGLDADSLVMVQIQ 380 Query: 361 ADGSSTAAK 369 DG A+ Sbjct: 381 -DGKFVLAE 388 >UniRef50_B8FK55 Extracellular ligand-binding receptor n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK55_DESAA Length = 377 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 83/356 (23%), Positives = 159/356 (44%), Gaps = 9/356 (2%) Query: 10 AGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVG 69 AG +L I+ T D +K+A + A +G A F R + IN +GG+ G + Sbjct: 18 AGRTSLGIAQTG--DSVKIAAIFAQTGAAAPMDKEAFEALRWTCQRINHQGGVLGKPVEV 75 Query: 70 VEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPEL 129 +EYD+ ++A K + DG V+G S+ + + + ++ I MISP +TNP L Sbjct: 76 LEYDNQSTSLGSLAAGKKAIRDGATAVVGASWSAHSLAIAHLMQEAKIPMISPASTNPAL 135 Query: 130 TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAA 188 T+ G +I R D G A + E + + + ++ + Q+ LA D Sbjct: 136 TKIG-DYIFRVCASDEFSGKALADFASERLNAKTVVVLTNANSQFSRDLAAFFIDQFNKK 194 Query: 189 NANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 248 V++ DFS ++ ++K + V+ GY + G +LRQA+++G+K+ F+G Sbjct: 195 G-TVLWEGDYLQDASDFSQILEKVKSLQPEVVFVPGYPRDSGYILRQAQNMGVKSIFLGA 253 Query: 249 EGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAV 307 +G N ++ AG A G + +P ++ ++ D + Y ++ Sbjct: 254 DGW-NYLMTEYAGSAVNGHYFSDLWHAGLPNPKSKAFLEEYNKDGFQVKISLAPLAYDSL 312 Query: 308 QSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 + A+ + G+ A+ + A V G +++++ GD + ++ + Sbjct: 313 MVIVNAINKAGTLNTAAIRDAIAATKDYEGVTGNISFNQFGDPIKP-IVILKFDNN 367 >UniRef50_C8WA26 Extracellular ligand-binding receptor n=2 Tax=Atopobium RepID=C8WA26_ATOPD Length = 393 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 86/374 (22%), Positives = 152/374 (40%), Gaps = 18/374 (4%) Query: 9 IAGMIALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDK 66 IAG ALA D I V V+G +G +AQ+G +G +K+ N KGG+ G + Sbjct: 17 IAGSFALAGCSPKNQDPNSIYVGVMGPFTGDVAQYGLAVRSGVLLYLKEFNKKGGVNGRQ 76 Query: 67 LVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATN 126 +V V D+ D +A+ V NK++++ + ++G + S+ T + + I ++ AT Sbjct: 77 IVPVVEDEKGDSTEAILVYNKLLDENVCAILGDVTSTPTIALAQKSVLDNIPCVTASATA 136 Query: 127 PELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEGLARSVQDGL 185 ++ G ++ R D QG A++ + QR+ I + Y G+ + Sbjct: 137 EDVVTHGN-NMFRATVTDPFQGVVLAEFAKKQ-GYQRVGTIFNSGGDYEIGVNNAFVQKA 194 Query: 186 KAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQF 245 + VV G G DF+A + + + D + YY + G+++ QAR +G K F Sbjct: 195 RELGIEVVSQQGYPTGAVDFNAQLTSIIGLDPDVILAPNYYQDNGKIVTQARQLGCKKPF 254 Query: 246 MGPEGVG----NASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVW 301 MG +G A D + + D Q V A + + + Sbjct: 255 MGADGWAGIIGGEQDYASATDLEGCFYCSAFVASNPDEKVQHFVTAYTEEYGEAPTNFCS 314 Query: 302 ITYAAVQSLATA---LERTG-----SDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFD 353 + Y A L +A +E+ G A++ + + V G L++ GD Sbjct: 315 LGYDAAMILCSALEVVEKHGYTYNSDAYRQAIIDAIASGVVEGVTGALSYQGTGDPVKST 374 Query: 354 FGVFQWHADGSSTA 367 + + S Sbjct: 375 L-IITFKDGKESIY 387 >UniRef50_C5EN81 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN81_9FIRM Length = 415 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 68/329 (20%), Positives = 123/329 (37%), Gaps = 4/329 (1%) Query: 17 ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDAC 76 + A + I + V G+++G G GA+ A +IN GG+ G ++ DD Sbjct: 57 TAEGASGETILIGVSGSITGAAPINGLRTKQGAQMAADEINEAGGVLGRQIELFVADDGG 116 Query: 77 DPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH 136 A+ AN I++ + +G S + + M++ + +T + Sbjct: 117 AQDTAINAANLIISQDVVAQVGPNLSGMALAVEGLLSQAKVPMLTGATSPKLVTTIDNPY 176 Query: 137 IMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFD 196 + R D+ Q AA Y + + +++ + + YG G +Q+ L V + Sbjct: 177 LFRIRAADTVQAKLAATYATQNLGCRKLGLFTNSNDYGSGALNVIQEYLDGIGTAYVA-E 235 Query: 197 GITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASL 256 G+ D ++ I +LK +D V E RQ +GL +G + + Sbjct: 236 AHNTGDTDMTSQILKLKDAGVDGVIIWTDDAETALAARQFHDLGLDVPIIGSPSISTPQV 295 Query: 257 SNIAGDA-AEGML-VTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATAL 314 S + + VT + V +A + Y Y ++ L A+ Sbjct: 296 SGLCQPQWLDNWYCVTDFTASNTSDHVTKFVKDFEAKYNETPELYAATYYGSIYILKDAI 355 Query: 315 ERTGSDEPLALVKDLKANG-ANTVIGPLN 342 ER G+ E AL+K L V+G Sbjct: 356 ERAGTTESDALLKALNETDNLQGVVGKYK 384 >UniRef50_Q9Y8W3 Branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Aeropyrum pernix RepID=Q9Y8W3_AERPE Length = 427 Score = 289 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 81/375 (21%), Positives = 144/375 (38%), Gaps = 40/375 (10%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK---GDKLVGVEYDDACDPKQA 81 +IK+ V+ +SG +A+ G G A+ +IN++GG+K G KL V D A P+ Sbjct: 35 EIKIGVILPLSGRLAETGADLRRGIEFAVDEINSQGGVKACGGAKLTVVYGDSAGKPETG 94 Query: 82 VAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 A A +++ +G+ ++G SS T+ AS++ E + I+P +T+P LT+RGY+ R Sbjct: 95 AAEAERLISQEGVIALVGAYQSSVTKTASEVAERYQVPFINPDSTSPALTERGYKWFFRV 154 Query: 141 AGLDSSQGPTAAKYI-----LETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 D A +I + + AIIH+ ++G +A + + +V Sbjct: 155 TPHDEMFAAQQADFIDWLNQKYGLNLRTFAIIHEDTEWGSKVAEAWKKYFTQHGYTLVEE 214 Query: 196 DGITAGE-KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP--EGVG 252 A + + +LK N D + Y + +++ ++ + + G Sbjct: 215 VSYHAATVTSLDSEVQKLKAANPDILLAASYIQDAILLVQTMKAQNFAPKVVLAQDAGFI 274 Query: 253 NASLSNIAGDAAEGMLVTMPKRYDQD-----PANQGIVDALKADKKDPSGPYVWITYAAV 307 N S + G +G + + + D P + + D K Y + Sbjct: 275 NPSYVSQVGK--DGWYIFSREVFSPDLIDKIPRLKEVNDRYKKKYGVDLNGNSARDYTGI 332 Query: 308 QSLATALE----RTGSDEPLALVKDLKA-------------NGANTVIGPLNWDEKGDLK 350 L ALE + P + L+ V +DEKG Sbjct: 333 WVLYYALEDACKKASPSNPEEFRRALRDSLVNLQLSPDQIIMPWKGV----KFDEKGQNI 388 Query: 351 GFDFGVFQWHADGSS 365 + Q DG Sbjct: 389 LGQGLIVQMFEDGKY 403 >UniRef50_D1U5A7 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5A7_9DELT Length = 376 Score = 289 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 83/366 (22%), Positives = 139/366 (37%), Gaps = 9/366 (2%) Query: 5 AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64 A +I A+ + I V G ++G ++ G NGA A++ IN GG+ G Sbjct: 9 ALLTALCLILFALPGCGDSSPILVGFSGQLTGKVSDMGVGGRNGALLAVEHINKAGGVNG 68 Query: 65 DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124 L V DD + A+A +++ G+ +IGH+ SS + A + GI++ISP Sbjct: 69 RPLKLVAEDDGNTAEGALAADTALIDAGVVAIIGHMTSSQSMAALPYVNESGIILISPTT 128 Query: 125 TNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII--HDKQQYGEGLARSVQ 182 + P LT + R + Q A Y + + IA I D Y + Sbjct: 129 STPLLTGI-KDNFTRVMVENPVQSRALATYARTILDIRTIASIMETDNLSYSMTFEETFT 187 Query: 183 DGLKAANANVVFFDGITA-GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + + +A G +++A++A L++ N D + + + + RS G+ Sbjct: 188 SVFEQLGGTFLSSFAYSASGATNWTAIMAELQRLNPDAILLTCPAQDFVTLAQNIRSSGI 247 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYV 300 + L G EG + + D PA + A + Sbjct: 248 TARLFSGAWAYTDKLLLWGGRDIEGSIFVIDFASDNPSPAFTSFIKAYETRFGSSPNFAS 307 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 Y +V +LA L++T L+ + V G + DE GD+ F V Sbjct: 308 AFAYESVLALANGLKKTDGSS-EGLLAAMTSGERIQGVTGSFSLDEYGDVTREVFIV--T 364 Query: 360 HADGSS 365 DGS Sbjct: 365 VRDGSF 370 >UniRef50_A0LKN5 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKN5_SYNFM Length = 380 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 85/374 (22%), Positives = 152/374 (40%), Gaps = 13/374 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M+ IA A+A AD I++A + A++G G R A+++INA+G Sbjct: 11 MRGAFWMFIALAAAVAAFPAQAADVIEIAAIYALTGEATDTNATSVRGVRIAVEEINARG 70 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 G+ G +L +D+ P + A + + ++G S + P + + + G+ MI Sbjct: 71 GVLGRRLRLEIHDNRSTPIGSHLAAERAADSDAVAILGASRSPHSLPIAKVAQARGVPMI 130 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK--QQYGEGLA 178 + +T+P++T+ G I R D QG A++ E +K A + +Y G+ Sbjct: 131 TNHSTDPDITRVGN-CIFRVCFTDEVQGAALARFAREDLKAST-ATLFVNLASEYSTGIC 188 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + Q + V+ + ++DF L+ + D ++ GY E G + A+ Sbjct: 189 QVFQKHFEQLGGRVILVREYKSRQRDFEDLVRDAGRVQADVLFLSGY-DESGLIAVLAQD 247 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSG- 297 G+ ++F+G +G+ N S GD + + D A D Sbjct: 248 KGVTSKFVGGDGLANPSFLAKGGDRLKRAYYSSHWTPAMDSRRSR---EFTARYGDVPDF 304 Query: 298 -PYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFG 355 + Y AV LA A++R GS E + L V G ++++ GD Sbjct: 305 GTGTALAYDAVMVLADAIKRAGSAERGRIRAALAETRSFEGVTGVISFNGHGDPVKS-VV 363 Query: 356 VFQWHADGSSTAAK 369 + + DG K Sbjct: 364 IMEVR-DGRPHYLK 376 >UniRef50_D2L9D5 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9D5_9DELT Length = 383 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 139/360 (38%), Gaps = 14/360 (3%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 A+ I+ V ++SGP + G+ E N + ++ +NA GG+ G + V DD D Sbjct: 22 PAVAAEPIRFGAVLSVSGPASFLGEPEKNTIQMEVEKLNAAGGVLGRPIEVVILDDETDV 81 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 +AV ++++ + + ++G S +T + +IS A ++T+ I Sbjct: 82 NKAVLAVDRLIKKEQVAAILGPTTSGNTLAVMGKAAAAKVPLISCSA-AEKITKPVNPSI 140 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 + A D + + +++AI+ +G+ +++ + A + + Sbjct: 141 FKVAPSDRLAVARILSHAKKQ-GYRKLAILTVSDGFGQAGREVLKELIPAQGFELTADEV 199 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 + D +A + ++ D V G P + + +G+KT GV + Sbjct: 200 FGPKDTDMTAQLTNIQGTAPDAVICWGTNPGPAVVAKNRVQLGMKTPLYMSHGVASKKFI 259 Query: 258 NIAGDAAEGM------LVTMPKRYDQDPANQ---GIVDALKADKKDPSGPYVWITYAAVQ 308 +AGDAAEG+ + K D DP A + K P + Y ++ Sbjct: 260 ELAGDAAEGLLLPAGKITVAEKLPDADPEKAQLVAYAKAYEERFKAPVSTFGGHGYDSLH 319 Query: 309 SLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWD-EKGDLKGFDFGVFQWHADGSST 366 A A+ GSD+P A+ L+ + G + E G D + G Sbjct: 320 LAAKAVADAGSDKPQAIRDALEKTKAFPGIGGIFTFTPEDHAGLGQDAFIMLGIEKGDWV 379 >UniRef50_C8W363 Extracellular ligand-binding receptor n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W363_DESAS Length = 380 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 96/346 (27%), Positives = 148/346 (42%), Gaps = 9/346 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 DI + S ++ G A+ INA GGI G K++ VE DD + V Sbjct: 39 DIVIGAAWPFS----SQNELFKEGVELAVDQINAGGGINGHKVLLVEKDDKGTVTGGMNV 94 Query: 85 ANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A + VIGH S + AS IYE GI+M+SP +T PELT++GY++I R Sbjct: 95 AQSFTKVPNLTAVIGHRFSYISIAASYIYEKAGIVMLSPTSTAPELTKKGYKYIFRDIPS 154 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 D+ A Y + + + I + YG GLA S +D + A +V A + Sbjct: 155 DNEIARQLALYAA-GLGHRHMVIYYADDSYGIGLANSFEDYARKAGIEIVDRFSYYADLR 213 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA 263 D + A K + D V+ Y P+ Q + +G+ + + L IAG+A Sbjct: 214 DLDRISATWKALDYDGVFMAQYMPDGAQFIADTAKLGISVPVFAGDAMDTPQLYRIAGNA 273 Query: 264 AEG-MLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEP 322 AEG ++ T+ D A + ++ + Y Y AV LA A++ TGS P Sbjct: 274 AEGTVIGTIFNPQDPRQAVKSFINNFYSKYGKMPTQYAAQGYDAVNLLAKAVKETGSASP 333 Query: 323 LALVKDLKA-NGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 A+ + L+ + V G + + GD G V + + Sbjct: 334 SAVAQKLRTFKDVSGVAGIHTFADNGDDIGK-LVVLKTLKNEQFVY 378 >UniRef50_B3E1S6 Extracellular ligand-binding receptor n=18 Tax=Deltaproteobacteria RepID=B3E1S6_GEOLS Length = 382 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 85/376 (22%), Positives = 147/376 (39%), Gaps = 19/376 (5%) Query: 1 MKRNAKTIIAGMIALAISHTA-MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK+ + L + A A IK+ + +++GP + G+ E + D+NAK Sbjct: 1 MKKLVMVCSLAAMLLCSATMALAAGTIKIGGLFSVTGPASFLGEPEKKTLEMLVADLNAK 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G KL V YD A D +AV +A K++ ND + +IG + + + E E I Sbjct: 61 GGINGQKLEAVIYDTAGDATKAVQLATKLIKNDKVVAIIGPSTTGESMAVLALTEKEKIP 120 Query: 119 MISPGATNPELTQ--RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 +IS A ++T+ + + +T D +Y VK + +AI+ +G Sbjct: 121 LIS-CAAGIKITEPAKDRKFTFKTPANDHVAVEKILQYAAR-VKQKNLAILTVTDGFGAS 178 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 ++ VV + + D + + +++ D + G P + + Sbjct: 179 GREQLKVSAAQKGFKVVADETYGPKDTDMTPQLTKIRSSKADAIICWGTNPGPAIITKNI 238 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGD-AAEGMLVTMP--KRYDQDPAN-------QGIVD 286 + +G+KT GV + +A AAEG+++ YD P N + Sbjct: 239 KQLGIKTPVYMSHGVASKKYIELASPAAAEGIMLPAGKLAVYDVLPKNDPQQKLLREYDA 298 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDE 345 A K + + Y A + A+ RT P + L+ +V G N Sbjct: 299 AYKKTHGVEASTFGGYAYDAFLLVTNAI-RTKGATPAQIRDGLEQTKKLVSVSGVFNMSA 357 Query: 346 KGDLKGFDFGVFQWHA 361 D G D F+ Sbjct: 358 N-DHNGLDLSAFEMVK 372 >UniRef50_D1C8R8 Extracellular ligand-binding receptor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8R8_SPHTD Length = 438 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 133/369 (36%), Gaps = 22/369 (5%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG-----DKLVGVEYD 73 + ++ V +++G A G E + + +N +GGI G + + YD Sbjct: 70 SAEQGEPYRIGAVLSITGGAATLGAPERDALQLLQDQVNEQGGILGPDGLRHPVEVIIYD 129 Query: 74 DACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQR 132 D D QAV +++ D + +I S ++ A D+ + MIS A++ +TQ Sbjct: 130 DQSDESQAVLAVTRLIESDQVPAIICCSQSGTSLAAVDVVTRNEVPMISL-ASSETITQP 188 Query: 133 GYQ--HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANA 190 + + A + Y + RI ++ +YG+ ++ + Sbjct: 189 VEERYWAFKPAWDNLQVSERLMLY-FQREGITRIGLLSVSTEYGDSGRNALHELADDYGV 247 Query: 191 NVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEG 250 ++V + G D + + R++ + + V PE ++ R +G+ + Sbjct: 248 SIVVDERFNPGTTDVTTHLNRVRTSDAEAVVVYALVPESVVAMKNYRDLGMDIPIVFTNS 307 Query: 251 VGNASLSNIAGDAAEG---------MLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVW 301 V + AG AEG + T+P Q + + +P + Sbjct: 308 VATPAFIEAAGPLAEGAIVPAGKIIVYDTLPDSDHQKEVLEQFAVEYQERYGEPPNTFAG 367 Query: 302 ITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWD-EKGDLKGFDFGVFQW 359 + A A E+ G +P A+ +++ + G L + E+ + V Sbjct: 368 HAWDAFWLYVRAFEKHGP-DPAAIRDEIEQTSDFVGITGVLTFSPERHTGFQTEDMVMVV 426 Query: 360 HADGSSTAA 368 DG A Sbjct: 427 VQDGRFVAL 435 >UniRef50_Q21B30 Extracellular ligand-binding receptor n=2 Tax=Alphaproteobacteria RepID=Q21B30_RHOPB Length = 390 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 74/371 (19%), Positives = 135/371 (36%), Gaps = 7/371 (1%) Query: 1 MKRNAKTIIAGMIALAISHTA-MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 M R + + A++ A AD IK+ VV +SG G G A ++NA Sbjct: 1 MIRTTLILSSLCATTALTAPAFAADPIKIGVVTPLSGTYTPIGQQVRWGLELAASEVNAA 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GGI G + + D+ +P AV A K+ + + ++ G + S ST E G L Sbjct: 61 GGIMGRPVQLIFEDEEANPSVAVQKAEKLFDVQKVDFLTGTVNSGSTLAVGQTAERAGKL 120 Query: 119 MISPGATNPEL-TQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 + + + + T + ++ R Q A ++++ ++ + + G Sbjct: 121 IATTVSFADSITTDKCSPNVFRVNARAGQQSTALAAWVIKQKPKAKVYFLGPDYEMGRST 180 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 + + ++A A KDF+ +L++ + +Y + ++L Q + Sbjct: 181 VATFKKTVEALGAVPAGEVFAPLDSKDFTQYFGQLRQARPEVLYTSVAGNDTVRLLTQMQ 240 Query: 238 SVGL--KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP-ANQGIVDALKADKKD 294 GL +G G + G AAEG + D N+ V A KA K Sbjct: 241 DFGLLKDLLVVGASGTVTSQNIAAIGGAAEGFGTGVGYSTQIDTLENKTFVAAFKAANKS 300 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 Y +Y + A+E+ S + + + ++ NT G Sbjct: 301 DPDLYGADSYGLIYFYKAAVEKAKSTDTDKVREAMRGLEWNTPQGKKTMRAGDHQAIQPM 360 Query: 355 GVFQWHADGSS 365 V + G Sbjct: 361 YVVRV-NGGQF 370 >UniRef50_D2Q320 Extracellular ligand-binding receptor n=19 Tax=Actinomycetales RepID=D2Q320_9ACTO Length = 409 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 106/395 (26%), Positives = 168/395 (42%), Gaps = 29/395 (7%) Query: 3 RNAKTIIAGMIALAISHTAMAD-----------DIKVAVVGAMSGPIAQWGDMEFNGARQ 51 R ++I +AL + D K+ V+ +SG ++ G + Sbjct: 8 RVGASLIVASLALTACGSRSDDNGGGGSGEATKTAKIGVIAPLSGDLSALGLGIQHSVEL 67 Query: 52 AIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASD 110 A+K N I G KL DD P A + +D + V+G L +S +Q Sbjct: 68 AVKQANDSNAIPGWKLEVAAKDDEAKPDVGKNAATALSSDKDVIGVVGTLNTSVSQQVQP 127 Query: 111 IYEDEGILMISPGATNPELTQ---------RGYQHIMRTAGLDSSQGPTAAKYILETVKP 161 + + I+ +SP T P LTQ R Y RT D+ QGP AA+Y+ ET K Sbjct: 128 VLAPKNIVQVSPANTGPGLTQGANWQKDPKRPYPTYFRTCTTDAVQGPFAARYLYETAKI 187 Query: 162 QRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVY 221 ++A IHDK+ YG+GL + + K VV + I + +F A+++ +K VY Sbjct: 188 TKVATIHDKKAYGQGLVGTFTEEFKKLGGQVVAAETINPDDANFQAVVSAVKPSAPQAVY 247 Query: 222 YGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY-DQDPA 280 YGG YP+ G + +Q ++ GL MG +G+ + +AG A G L T D + Sbjct: 248 YGGEYPQAGPLSQQMKAAGLNVPLMGGDGIFDPKYVQLAGKTAPGDLATSVGAPVDSLAS 307 Query: 281 NQGIVDALKA-DKKDPSGPYVWITYAAVQSLATA----LERTGSDE--PLALVKDLKANG 333 + V+ A +P Y +Y A ++ A L+ E A V+ L Sbjct: 308 AKKFVEDYNAEKFAEPYAAYGGYSYDAANAIINALKTSLKDANDVESARAATVEALGKVS 367 Query: 334 ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 + V G + +D+ GD V++ A +T Sbjct: 368 FDGVTGKVAFDQYGDTTSKVLTVYKVDAGKWATVE 402 >UniRef50_Q21BI4 Extracellular ligand-binding receptor n=23 Tax=Bacteria RepID=Q21BI4_RHOPB Length = 399 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 82/383 (21%), Positives = 151/383 (39%), Gaps = 21/383 (5%) Query: 2 KRNAKTIIAGMIALAIS--HTAMAD-DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 +R+ ++A + + +A A +KV V +++GP + GD E + + INA Sbjct: 14 RRHITRLLAAVAVSGFAIVPSAFAQATVKVGSVLSVTGPASFLGDPEDKTLKLYVDKINA 73 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGI 117 GG+ G K+ V YDD D +A A +++ +D + ++G + +T ++E+ I Sbjct: 74 AGGVAGKKIELVVYDDGGDANKARTFATRLIEDDKVVAMVGGSTTGTTMAMIPVFEEAQI 133 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 IS A E+ + +++ +T D + I + + A+I +G + Sbjct: 134 PFISL-AGAIEIIEPVRKYVFKTPHTDKMACEKIFENI-KQRGFTKAALISGTDGFGSSM 191 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKK-ENIDFVYYGGYYPEMGQMLRQA 236 +V + + D +A + ++K I V G+ + R Sbjct: 192 RAQCVKVAPTYGVQIVTEETYGPRDSDMTAQLTKIKGTAGIQAVVNPGFGQGPAIVTRNY 251 Query: 237 RSVGL-KTQFMGPEGVGNASLSNIAGDAAEGM------LVTMPKRYDQDPANQ---GIVD 286 +GL T GV + S ++AG AAEG+ L+ K D DP + Sbjct: 252 AQLGLSSTPLYQSHGVASKSFIDLAGPAAEGVRLPAAALLVGDKLPDGDPQKKVVVDYKK 311 Query: 287 ALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDE 345 + K P + Y + L A++R S +P + +++ G G + Sbjct: 312 TYEDSTKQPVSTFGGHGYDGLFILVEAMKRANSTDPKKIRDEIEKTKGFVGTGGIVTMSP 371 Query: 346 KGDLKGFDFGVFQW--HADGSST 366 D G D F+ G T Sbjct: 372 T-DHLGLDLSAFRMLEVKSGDWT 393 >UniRef50_B9L4C0 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L4C0_THERP Length = 443 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 17/352 (4%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 + I +A + +SG AQ G+ G AI D+ G + G K+ V D C+P+ Sbjct: 76 GEPIVLAWMLTVSGGTAQLGEDSKRGIEIAIDDL--GGQLLGHKIELVGEDSGCNPEGGQ 133 Query: 83 AVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQH--IMR 139 A A ++ + I ++G CSS + + I + G++M+SP T P+LT +R Sbjct: 134 AAATRLAANPRIVAIVGSSCSSEARVGAPIIDQAGLVMVSPSNTAPDLTDPAKHVNAYLR 193 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT 199 A D QG AA++++ + +++A IHD Y E LA + +K VV + ++ Sbjct: 194 VAHNDKVQGRVAAEFVVNKLGLKKVATIHDGSLYAEQLANVFAENVKKLGGTVVAQEAVS 253 Query: 200 AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV-GL-KTQFMGPEGVGNASLS 257 + D ++ R+ + + +YY + P + QA+ + GL + M +G+ Sbjct: 254 PDDTDMRPVLTRIATQQPELIYYPIFNPAGSFITIQAKEISGLENVKLMSADGLLEPQTV 313 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPS-GPYVWITYAAVQSLATALER 316 AG AA G+ ++ P P Q V + + Y A + A+++ Sbjct: 314 QNAGQAAVGLYLSGPDLTVLGPKYQEFVQKYQQKYGTKPVAGFHAHAYDATMMIVEAIKK 373 Query: 317 T------GSD--EPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQW 359 G+ AL L + + G L D GD V++ Sbjct: 374 VAVQAPDGTLYIPRKALRDALYETKNFQGLTGNLTCDPNGDCADPKIAVYEV 425 >UniRef50_A1SHR8 Extracellular ligand-binding receptor n=1 Tax=Nocardioides sp. JS614 RepID=A1SHR8_NOCSJ Length = 394 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 94/353 (26%), Positives = 158/353 (44%), Gaps = 14/353 (3%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI-----KGDKLVGVEYDDACDPK 79 I VAV G M+G +G + +G + A K+IN GGI KG K+ V++DD DP Sbjct: 37 TITVAVAGPMTGDNGIYGQDQLSGVQFAAKEINDSGGIPDGPLKGKKIKVVKFDDVADPN 96 Query: 80 QAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 Q +VA KI +D I V GH SS T A IYE G+ + ++NPE+T ++++ Sbjct: 97 QGASVAQKICDDTSIMAVFGHSNSSVTLAAEPIYERCGVPLFVSYSSNPEITAELHENLF 156 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 RT D+ G A + + + +++ +I YG+GL + + +V Sbjct: 157 RTLIDDAKMGSEMASFSHDQLGFKKVGVIASDDDYGDGLKTNFNKTAEEIGLDVAKTVTT 216 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSN 258 +A +KDF+ + L+ D + Y + ++QA ++G G + L Sbjct: 217 SAKQKDFTPQLTELRNAGADSLVLLNTYTDAALQIKQADAMGWDVPIFVTPGSNSPELVK 276 Query: 259 IAGD-AAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 IAG+ AAEG +V + P V+ A G ++Y + T+LE+ Sbjct: 277 IAGEKAAEGTIVAAVFDPNSSEPGPAKFVNDFTAANGKGPGESAAMSYDSFYVFLTSLEK 336 Query: 317 TGSDEPLALVKDLKANGANT--VIGPLNWDEKGDLK---GFDFGVFQWHADGS 364 G+ + ++++ G T + G L ++E + G + DG Sbjct: 337 -GAKDRKSVIEKSAEIGTFTLPIRGELMFNETHEPTVVPGKPAQILLQVKDGQ 388 >UniRef50_Q2Y4K2 Putative amino acid ABC transporter, solute-binding protein n=1 Tax=uncultured archaeon RepID=Q2Y4K2_9ARCH Length = 490 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 77/398 (19%), Positives = 147/398 (36%), Gaps = 39/398 (9%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 A ++A ++++ A+D+ + V+ SG + +G E + + A+K++N GG+ Sbjct: 12 IATFVLAAVLSMGTVG---AEDVTIGVLYPFSGDLGTYGKPETDAMKLAVKEVNENGGVL 68 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G +L + D +AVA +++++ + +IG S + + G+L ISP Sbjct: 69 GGRLKLLIKDTETSEDEAVAKVHELLDWYNVSVIIGTAGSETCKAIIGYTTSNGVLQISP 128 Query: 123 GATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 T E T RT D+ QG A+ ++ + + + YG G ++ Sbjct: 129 SVTGVEFTTYPDNDLFFRTCPSDALQGIAMARLAIQQ-GYKTASTLVVWNPYGVGFEKAF 187 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 K V+ F++ + ++ N D V Y ML+ A G Sbjct: 188 TKEFKTLGGKVLQSVKYDPDTTTFNSEVEQVTAANPDCVMLCAYPETGSGMLKTAYKNGY 247 Query: 242 --KTQFMGPEGVGNASLSNIAGDAAEGMLVTMP----KRYDQDPANQGIVDALKADKKDP 295 ++ EG+ + L+++ G G + + PA + A+ Sbjct: 248 MDSIDWLLSEGLKSDGLADMVGKDEAGNYIIAGLKGTTPDSRGPAYETFRQKYLAEYGKV 307 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLK------------------------- 330 Y +Y AV +A A+E+ G A+ L+ Sbjct: 308 PEAYCANSYDAVAVVALAIEKAGDTSGTAIRDSLRDVANPPGNKDVSDIGEALDTIRKGF 367 Query: 331 -ANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTA 367 + G + +DE GD+ G F + +G Sbjct: 368 YSINYLGASGEITFDEHGDVMGS-FCEWTITDNGRVVY 404 >UniRef50_A1A0J1 Solute binding protein of ABC transporter for branched-chain amino acids n=12 Tax=Bifidobacterium RepID=A1A0J1_BIFAA Length = 433 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 94/388 (24%), Positives = 167/388 (43%), Gaps = 28/388 (7%) Query: 3 RNAKTIIAGMIALAISHTAMA---------------DDIKVAVVGAMSGPIAQWGDMEFN 47 + I AG ++++++ + D I + V SG A +G+ E Sbjct: 43 KCVALIAAGAMSMSLAACSGGSMDDSSSSNGSAANSDTITLGSVTTNSGTAAAYGEAEVA 102 Query: 48 GARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQ 106 G + A+ +INAKGGI G K+ DD D +A NK+ D + V+G SS+T Sbjct: 103 GFKLAVDEINAKGGINGKKVKLESMDDKGDATEASNAFNKLAGDNSVLGVVGPTISSTTA 162 Query: 107 PASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAI 166 + + + + I+P AT+ + G ++ RT DS QG AAK+ ET+K +++A+ Sbjct: 163 AVAPLADQSKLPAIAPAATSDSIETGG--YMFRTCFKDSYQGEIAAKFAAETLKVKKVAV 220 Query: 167 IHDK-QQYGEGLARSVQDGLKAANANVVFFD-GITAGEKDFSALIARLKKENIDFVYYGG 224 ++ Y G+ ++ K A +VV + +A + ++S+ + +++ +F+Y Sbjct: 221 LYGTGDPYSSGVGKAFAAAAKKAGLDVVAEENSSSADDTEYSSQLQKIQAAGAEFLYAPY 280 Query: 225 YYPEMGQ-MLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ--DPAN 281 YY G ++ QARSVG K MGP+G +++ +L T D + Sbjct: 281 YYSVAGPYIIPQARSVGYKGYVMGPDGYDGLKMTDD-KSLYNKVLYTTHYSPDDTSNAKV 339 Query: 282 QGIVDALKADK-KDPSGPYVWITYAAVQSLATALERTGS-DEPLALVKDLKANGANTVIG 339 Q + + K + + Y +V + A+E+ G + + V G Sbjct: 340 QDFIKSYKKANKNADPNTFTALGYDSVYMMKQAIEKAGKNATREGVRNAIAGMSFEGVTG 399 Query: 340 PLNWDEKGDLKGFDFGVFQWHADGSSTA 367 D+KG K + DG Sbjct: 400 NFTLDKKGSPKKSVVVLE--LKDGKPQY 425 >UniRef50_Q1AZK7 Extracellular ligand-binding receptor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZK7_RUBXD Length = 414 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 146/344 (42%), Gaps = 8/344 (2%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 I++ + +SGP A G+ NG + +N I G ++ D DP+ A+ V Sbjct: 49 PIRIGALLTLSGPYATLGESIRNGMETFL-RLNDN-QIGGREVQVRYEDSEGDPQVALRV 106 Query: 85 ANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-QRGYQHIMRTAG 142 ++ + +++G + S+ ++ + + I++I+ A +L+ ++ + R + Sbjct: 107 YRQLTGQNAVDFLMGPVISTEALALANRLQRDRIILINSNAAANDLSWEQKSDYSYRVSQ 166 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 + G A+YI + + I G + + + + A VV G Sbjct: 167 SNYQLGAAGAEYIFRNIG-KTAFTIGMDYVAGYEVIEAFRIAYREAGGEVVGSAFSAPGT 225 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT--QFMGPEGVGNASLSNIA 260 DF+ + +++ + V+ + + L+Q S GLK +G + + + ++++ A Sbjct: 226 ADFATYLTNIRRAEPEVVFSFLSGTDAIRFLQQYDSFGLKGEIPLIGHDQLASPTVTDPA 285 Query: 261 GDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGS 319 G+AA G++ + ++ N+ V+A + + P Y +A A+E GS Sbjct: 286 GEAAVGVMACSFYYPNLENETNRRFVEAYRKEYDQPPDTIACQGYDTGNIMAKAVEEAGS 345 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADG 363 EP AL++ LK + G D + ++ + + DG Sbjct: 346 TEPDALIEVLKGISLQSPRGSFTMDPETHNPIQNYYIGENARDG 389 >UniRef50_B3W8M3 Branched-chain amino acid ABC transporter, substrate binding protein n=19 Tax=Lactobacillales RepID=B3W8M3_LACCB Length = 397 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 96/376 (25%), Positives = 170/376 (45%), Gaps = 28/376 (7%) Query: 2 KRNAKTIIAGMIALAISHTA----------MADDIKVAVVGAMSGPIAQWGDMEFNGARQ 51 K + LA++ A + IK+ V +SG +A +G+ + G Sbjct: 7 KAIMSAGVIAASMLALAGCATKSATSKGNTAGNTIKIGVNMELSGAVAGYGEQQKQGIEL 66 Query: 52 AIKDINAKGGIK----GDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQ 106 A+K INA GGIK K+ V D+ A +VA ++ N D + ++G ++ Sbjct: 67 AVKQINAAGGIKVGNTKKKITAVYRDNKSSTSGAASVAAQLANTDKVVAIVGPATTNDGT 126 Query: 107 PASDIYEDEGILMISPGATNPELTQRGY----QHIMRTAGLDSSQGPTAAKYILETVKPQ 162 + + M+SP AT+P T + ++ R + QG AA + +T+K + Sbjct: 127 ASIPNVTKAAVPMVSPSATDPNFTLQKNGSVQPYVFRACFNNDFQGDHAAIFANDTLKAK 186 Query: 163 RIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVY 221 +AII D YG GLA++ + K N+V +G+KDF+A++ +K + ID +Y Sbjct: 187 NVAIIADNSTDYGTGLAKAFKKKFK---GNIVTTQYYQSGDKDFNAMLTTIKSKKIDAIY 243 Query: 222 YGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA-AEGMLVTMPK---RYDQ 277 GYY E+G +++QAR G+K F+G +G+ + L+ IAG A A + T P + Sbjct: 244 APGYYSELGLVIKQARQSGIKVPFIGADGMADPKLAQIAGAANATDIYYTTPFSTLSANS 303 Query: 278 DPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANT 336 + + + K + + + + Y +V + A+E + + ++ K L Sbjct: 304 SKLVKNFMTSFKKQYQTEAPTFSALAYDSVYMIKQAIEDQKAADSASIAKGLAKIKKMPA 363 Query: 337 VIGPLNWDEKGDLKGF 352 V G D + + Sbjct: 364 VTGTTTIDSHHNPEKP 379 >UniRef50_Q9AQ31 40kDa leucine-binding transmembrane protein n=3 Tax=Bradyrhizobium RepID=Q9AQ31_BRASW Length = 384 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 134/343 (39%), Positives = 192/343 (55%), Gaps = 6/343 (1%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 A D+ +AV G M+G A G +GA A+ INA G + KL+ DDACDPKQA Sbjct: 38 WAKDVYIAVAGPMTGSTAALGAQIRDGAAAAVDSINASGLLPDTKLILRIADDACDPKQA 97 Query: 82 VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 VAVAN++ DGIK V+GH CSSS+ PASDIY + ++ ISPG+TNP LT+RG + R Sbjct: 98 VAVANRLTTDGIKLVVGHFCSSSSIPASDIYAEAEVIQISPGSTNPRLTERGLTTLFRIC 157 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 G D QG AA YI+ + ++A++ DK G+G+A V+ L+AA AG Sbjct: 158 GRDDQQGGVAADYIVRHHQGAKLAVLDDKSTAGKGIADIVESRLRAAG-EHTVRQSYVAG 216 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 EKD++AL++RLK++ I VY GGYY E+G ++RQA + + + + + IAG Sbjct: 217 EKDYTALVSRLKRDGIQIVYIGGYYNEIGLIVRQAVEASARLTVIANDPLMTSDFVAIAG 276 Query: 262 DAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGP--YVWITYAAVQSLATALERTGS 319 DAA G L T ++ A V LK Y YAAVQ+ A +++R G+ Sbjct: 277 DAANGTLFTFMPDPTKNAAGAAAVARLK---GSSLSAAGYTLYAYAAVQAWADSVKRAGT 333 Query: 320 DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 + + + L++ T IG + +D KGD F V++W + Sbjct: 334 FDGIRVAAALRSGSIQTAIGTVRFDSKGDNAAPGFVVYRWRDN 376 >UniRef50_D1C6F1 Extracellular ligand-binding receptor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6F1_SPHTD Length = 457 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 81/376 (21%), Positives = 152/376 (40%), Gaps = 35/376 (9%) Query: 18 SHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD 77 + TA + +K+ ++ +G ++ +G +N A A+++IN+ GG+ G + V DD Sbjct: 68 TPTASGEALKIGMLAPFTGDLSDFGPAFWNAAMLAVEEINSAGGVLGQPVELVRADDGTS 127 Query: 78 PKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASD-IYEDEGILMISPGATNPELTQ-RGY 134 P+Q V A ++V + + +IG S T P ++ + GI+ ISP +T+P LT Sbjct: 128 PQQGVEEARRLVEVERVSAIIGAAASGVTLPVAESVTGPSGIVQISPASTSPALTDANDN 187 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + RT D++QG A+ + + Q ++ YG+GL+ + V+ Sbjct: 188 DFLFRTTISDAAQGVVLAQ-LAQEQGFQTACTMYTNNAYGQGLSEVFAREFERLGGQVLA 246 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 + ++A +A + N D + Y LR+A GL F+ +G + Sbjct: 247 QVPHEQEQASYAAELATCTEGNPDVLAAISYPESARVYLREAVEQGLVENFLFVDGTKSE 306 Query: 255 S-LSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSG-PYVWITYAAVQSLAT 312 +++ D EGM T P D + P++ +Y AV +A Sbjct: 307 EQFADLGWDVFEGMWGTAPGALD-TEVGDAFDARYEEAYGRRPELPFLRESYDAVYVIAL 365 Query: 313 ALERTGSDEPLALVKDLKAN----------------------------GANTVIGPLNWD 344 A ++ GS +P A+ ++ P ++D Sbjct: 366 AAQKAGSTDPAAIRDAIREIANPPGETVTPGSEGWARALELIAAGEDINYEGAASPADFD 425 Query: 345 EKGDLKGFDFGVFQWH 360 + GD+ V++ Sbjct: 426 DNGDVLTGAIEVWRVQ 441 >UniRef50_B1I2N9 Extracellular ligand-binding receptor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2N9_DESAP Length = 392 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 74/378 (19%), Positives = 140/378 (37%), Gaps = 19/378 (5%) Query: 5 AKTIIAGMIALAISHTAMA----DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 + + A + K+ V +SGP A G + N D+NA+G Sbjct: 12 IVAVALAFFIAGCGGQSGAPEKVEPYKIGAVIEVSGPAASLGVPQKNTLEMLAADLNARG 71 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GI G + + D+ + +AV A ++++ D + ++G S ++ D + + M Sbjct: 72 GINGHPVQLIILDNKTNETEAVLAAKRLIDQDKVLVILGGSTSGTSLAMVDTVQKSRVPM 131 Query: 120 ISPGATNPELTQ-RGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 IS A+ + + +TA D A Y+ ++ +A + +G+ Sbjct: 132 ISLAASAKIVEPVADRHWVFKTAQSDILVANKIAAYL-KSKGITDVAFMSMNNAFGDSGR 190 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 S A VV + +KD + + ++K + + P + + R Sbjct: 191 GSFMTAAAAHGLKVVVDERFEVDDKDMTMQLTKVKGSSAQALVVWAIPPSASIVTKNFRD 250 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP------KRYDQDPANQ---GIVDALK 289 + + + GVGN + ++AG AA+G++ M + D DP + A + Sbjct: 251 LKMAIPLIHTHGVGNQTFLDLAGGAADGIIAPMGKLLVAEQLPDTDPQKALLLEYLQAYQ 310 Query: 290 ADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDE-KG 347 A + + + A Q A+E G + A+ L+ G + G N Sbjct: 311 AKYGERPSTFGGHGWDAFQLAVKAIETAG-ADRAAIRDALENITGFVGISGVFNMSAQDH 369 Query: 348 DLKGFDFGVFQWHADGSS 365 + G D V DG Sbjct: 370 NGLGEDSMVLVEVTDGKW 387 >UniRef50_Q1IZ32 ABC-type branched-chain amino acid transport system, periplasmic component n=6 Tax=Deinococcus RepID=Q1IZ32_DEIGD Length = 384 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 99/375 (26%), Positives = 170/375 (45%), Gaps = 12/375 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ A ++ + + ALA+ +K+A + +SG + G NGA+ A+ + + Sbjct: 1 MKKTALSL-SVLTALALGSAHAQTVVKLATLTPLSGGQSDLGTQIRNGAQLAVNEYKPQF 59 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILM 119 G L + +DD DP A A KI D I V+G L S PAS + M Sbjct: 60 KKLGMDLQLIAFDDQADPATGTAQARKIAADRQILAVVGTLNSGVAIPASAALAPSHVAM 119 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 ISP T ++T RG ++ R D +QGP A +I +K +++ I++DK YGEGLA+ Sbjct: 120 ISPANTANQVTDRGLSNMNRIVARDDAQGPAGANFIANNLKAKKVYILNDKTAYGEGLAQ 179 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 V+ LKA V+ +G DFS++IA++K D +Y+GG Y ++G ++Q R Sbjct: 180 EVEKALKAKGVQVIANEGTEEK-SDFSSIIAKIKLNRPDAIYFGGIYNQVGVFIKQLRDA 238 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGP 298 G+ +G +G+ ++ L+ IAG A + T + PA + + P+ Sbjct: 239 GIDAPVVGGDGLDSSQLAVIAGAGANNIYFTTVAAPLEALPAAKVFATNFQKTFNRPAQG 298 Query: 299 YVWITYAAVQSLATALERT------GSDEPLALVKDLKANGANT-VIGPLNWDEKGDLKG 351 + Y A + + + ++ + G ++++ +GD K Sbjct: 299 FGAFGYDAAKVALQGILNAVRANGNKVPSRQQVETAIRKGSYTGLLSGSVSFNSEGDRKA 358 Query: 352 FDFGVFQWHADGSST 366 V + +G Sbjct: 359 ATLYVMKV-DNGKYV 372 >UniRef50_A7ID05 Extracellular ligand-binding receptor n=5 Tax=Proteobacteria RepID=A7ID05_XANP2 Length = 386 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 81/356 (22%), Positives = 156/356 (43%), Gaps = 10/356 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M T+ A +L AD IK+ V ++G A G NGA+ A +INAKG Sbjct: 2 MISRRTTLAALAFSLLAGTAMAADTIKIGVNEPLTGAFAASGTYVVNGAKIAADEINAKG 61 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 G+ G K+ V D+ +P +A +VA K++ +D + ++G SS T E+ + M Sbjct: 62 GVLGKKIELVIEDNKSNPTEAASVAEKLITSDKVPVLMGSWGSSLTLATMPKLEEYQVPM 121 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 + +++ ++T G I R + S + + I + + +++ + +G G A Sbjct: 122 LVETSSSGKITTSGNPFIFRISPPSSVEADAF-EPIAKKLGLKKVDFLVINNDWGRGAAA 180 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 LKA V + + +D SA +++LK + D + ++ + +Q ++ Sbjct: 181 DFSKMLKANGVEVGLTETMDQSAQDMSAQLSKLKASDADTIMVTSAVDQLTLLFKQMAAL 240 Query: 240 GLKTQFMGPEGVGNA-SLSNIAGDAAEGML---VTMPKRYDQDP---ANQGIVDALKADK 292 GLK + + G N + AG AA+ + +P ++ P A + K Sbjct: 241 GLKKRVITTGGSQNPDQIIAQAGPAADNTMHLTTFLPWWPEKTPNPEATAYFLGEWKKRG 300 Query: 293 KDPSG-PYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKG 347 + +G + Y ++++A A+ G +P ++ K + GP+ + + G Sbjct: 301 FEFAGATESFRGYDGIRTVAAAIAAGGGTDPASIQKGFWKVDMVGLNGPIKFAKSG 356 >UniRef50_A1VTJ7 Extracellular ligand-binding receptor n=6 Tax=Burkholderiales RepID=A1VTJ7_POLNA Length = 407 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 77/353 (21%), Positives = 148/353 (41%), Gaps = 8/353 (2%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 + IK+A + +SG A G NG A+K+INA GGI G ++ D +P A Sbjct: 24 AQEMIKIANIVELSGSGATAGTNFKNGIELAVKEINASGGILGKQIQTTTSDTQSNPGVA 83 Query: 82 VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 + K +++ + + G + S S + + + G +T++G ++ RT+ Sbjct: 84 KGLTQKAIDNDVFAIFGPVFSGSIMVSMAESRRAEVPNFT-GGEAAAITEQGNPYVFRTS 142 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 ++ P A+Y+ + K + IA+I+ +G+G ++ L+ ++ + AG Sbjct: 143 FTQATAMPKVARYMSDQAKLKTIAVIYVNNDFGKGGLDMLKKALEDSSTRITTAISTDAG 202 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 + DFSA + + K+ N + V+ E ++LR+ R G +G + + +AG Sbjct: 203 QVDFSAAVLKAKQSNAEGVFVYSNEEESARILRELRKQGWTKPIIGETTLTGQKVIELAG 262 Query: 262 DAAEGMLV-TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 DAA G + PA + + + S Y+ + L A+++ G Sbjct: 263 DAANGAIAHVGLTVNAPVPAVRAFSAKFEKEYSYVSDHNGMKGYSGIYFLKAAIDKVGKL 322 Query: 321 EPLALVKDLK-----ANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 + A+ + ++ + +D KGDL F V + A Sbjct: 323 DRKAVADAMHHLKVNSDRYPGALMYTEFDGKGDLDRMSFMV-EVKKGKQEVIA 374 >UniRef50_B3ENC9 Extracellular ligand-binding receptor n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ENC9_CHLPB Length = 377 Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats. Identities = 88/364 (24%), Positives = 165/364 (45%), Gaps = 11/364 (3%) Query: 4 NAKTIIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 A I AG+ A S + I + V+ ++G +A +G+ GA A++ I+ + Sbjct: 14 LAMLITAGIFAAGCSPQQNKTEGITIGVLLPLTGELASYGEPMKKGAEIALEQISTENKG 73 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 + K V D DPK AV+ K+V+ +G Y+IG + SS+T I E + ++S Sbjct: 74 EEYKYNAVYIDSQADPKTAVSGMQKLVSLNGACYIIGDVSSSTTLAMVPIAEKNKVFLLS 133 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 PGA++P+L R + +A++I +K ++A+++ +YG GL Sbjct: 134 PGASSPKLRGI-SPFFARNYPSSVEESIDSAEFIKNVLKKDKVAVVYVTNEYGLGLVDMF 192 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 Q V + E DF +IA+L++E + +Y G EMG+ ++Q + Sbjct: 193 QKKYTEIGGQVTMKEPYKFEESDFRTIIAKLRQEQPEVIYLAGNQKEMGKFMKQYAESEI 252 Query: 242 KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQ---GIVDALKADKKDPSGP 298 + N+AG AA+G++V +P +DP + ++ KA + Sbjct: 253 SATIVSNISFLEPDCINVAGKAADGVIVPVPYFNPEDPLMKGTHAFAESYKAKFGEYPSL 312 Query: 299 YVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVF 357 V + Y A+ + A+ G+++P + ++ + +G L++ + GD+ VF Sbjct: 313 AVAVGYDAMMLMNKAVTD-GNNDPEKAAEVIRNLKKYDGAMGTLSFTD-GDVSVP--MVF 368 Query: 358 QWHA 361 + Sbjct: 369 KVVK 372 >UniRef50_C4X495 ABC transport system periplasmic binding component n=8 Tax=Proteobacteria RepID=C4X495_KLEPN Length = 378 Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 92/378 (24%), Positives = 161/378 (42%), Gaps = 17/378 (4%) Query: 1 MKRN---AKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 MK A + + AL + +A A +IK+ VV +SG ++ +G G I+ I Sbjct: 1 MKSFSGKASLMATLVAALVGASSAQAAEIKIGVVLPLSGALSGYGQPSQKGLDI-IQAIT 59 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEG 116 GD + + DD D +A ++V+ D + VIG + SS+T + I +D Sbjct: 60 PTLK-NGDTIKLIVIDDKSDKVEAANAMQRLVSSDKVDAVIGEVTSSNTLAMTKIADDSK 118 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGE 175 ++S ATN +T R + ++ R DS QG A +K + AI+ D Y Sbjct: 119 TPLVSSTATNDRVT-RNHPYVSRVCFSDSFQGVVGANLASRDLKAKTAAIVFDSSNDYSV 177 Query: 176 GLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQ 235 GLA++ + + G KDF A +A +K +N+D +Y YY E + Q Sbjct: 178 GLAKAFRTQFLKNGGTIPIEVQAPGGSKDFKAQLASVKAKNVDMIYMPIYYTEGALIAVQ 237 Query: 236 ARSVGLKTQFMGPEGVGNAS-LSNIAGDAAEGMLVTMPKRYD---QDPANQGIVDALKAD 291 ++ +GL +G +G+ ++ DA G + T + Q PA + + A +A Sbjct: 238 SKQLGLNKPVVGGDGLAADQVFFDVGKDAVNGYMTTDYYSPNAKEQTPAGETFIKAWEAK 297 Query: 292 KKDPSGPYVWITYAAVQSLATALER-TGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDL 349 + P+ + + A + A+ + + + + + + ++A V G L + GD Sbjct: 298 YQQPTHTWGAMAADAYNVIVNAMNQCSDPHDRVCVNEKIRATKDFQGVTGTLTL-QNGDA 356 Query: 350 KGFDFGVFQWHADGSSTA 367 V DG Sbjct: 357 IRSA--VINEVKDGKLAF 372 >UniRef50_A6X7H9 Extracellular ligand-binding receptor n=3 Tax=Alphaproteobacteria RepID=A6X7H9_OCHA4 Length = 384 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 77/375 (20%), Positives = 146/375 (38%), Gaps = 8/375 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK K +I A++ A+A+D+ + + A +G +A + G + A+ +INA G Sbjct: 1 MKTTLKALILSTALGALAFPALAEDLAIGLATAQTGALAPYDQPSLKGLQMAVDEINAAG 60 Query: 61 GIKGD-KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GI G + + D D Q VA ++V++GIK +I + + A I + I Sbjct: 61 GIAGKFPIKLIAKDTRSDAAQTALVAQELVDEGIKILITPCDADPSIAAGQITQAAQIPT 120 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII-HDKQQYGEGLA 178 S AT P + ++ D+ Q A Y E + ++ Y L Sbjct: 121 FSFCATTPTMPLAVGDYMFGNYPADNVQAAVLANYAKEK-GFKTAYVLKSPDTAYTLKLP 179 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKEN--IDFVYYGGYYPEMGQMLRQA 236 K V+ + G++DFSA + ++K N D + Y P+ +RQ Sbjct: 180 EYFATSFKGKGGEVIGEGTYSMGQQDFSAEVTKIKALNPAPDVIMTAAYEPDFPAFIRQL 239 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPS 296 R G+ T +G +G+ + + + G +G++ T + + KA Sbjct: 240 RGAGVTTPILGSDGIDSPTTFGL-GALVDGVVFTTAGFATEGSPLAAFNEKYKAKFGQDP 298 Query: 297 GP-YVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDF 354 Y+ Y + + A+ + S E A+ + + + V G +++ + Sbjct: 299 DTVYIANGYDLGKVIEAAVTKADSIESTAIREAIASLENVEGVTGKISYAGTQGMPLRSV 358 Query: 355 GVFQWHADGSSTAAK 369 + + S + Sbjct: 359 SLVRIEGGNRSLVNQ 373 >UniRef50_Q5P917 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=18 Tax=Proteobacteria RepID=Q5P917_AZOSE Length = 477 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 70/367 (19%), Positives = 137/367 (37%), Gaps = 17/367 (4%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 A +++ V G +G + G G R A +INA GG+ G + VE DD Sbjct: 100 SVQAAPPLRIGVSGPFTGGSSPMGISMREGIRIAAAEINAGGGVLGRPIELVERDDEARN 159 Query: 79 KQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ-- 135 ++ V +++ + + +G + + + Y+ I +I+ AT +T++ Sbjct: 160 ERGAQVVQELIEKEHVVAGLGIVNTGVALASQRAYQHARIPVITSVATGSVITKQFVPPQ 219 Query: 136 ----HIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANAN 191 + R + D+ Q ++ +R++I HD YG+ ++ L A + Sbjct: 220 YPDNFVFRISANDTLQAAMIVMEAIDRRGLKRVSIFHDATNYGQLGREDLERALAARGVH 279 Query: 192 VVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV 251 V + E D + + R ++ + + G PE+ Q+ + + +G + Sbjct: 280 PVTVERFQIRESDMTTQLRRAREAGAEAILTYGIGPELAQIANGMARMNWRVPLIGSWTL 339 Query: 252 GNASLSNIAGDAAEGMLVTMPKRYDQ-DPANQGIVDALKADKKD---PSGPYVWITYAAV 307 ++ + AG AEG + + P + +DA K P P Y ++ Sbjct: 340 AMSNFIDNAGPNAEGARMPQTFIAEPTTPGRRAFLDAWKKSSGSARIPVPPAAAQGYDSL 399 Query: 308 QSLATALERTGSDEPLALVKDLKAN--GANTVIGPLN--WDEKGDLKGFDF--GVFQWHA 361 LA A+ + GS E + + L+ VI + + + Sbjct: 400 LLLAAAIRQAGSTEGDRIREALEELREKVEGVIMTYHQPFSKDNHETITSVHDIFMGEVR 459 Query: 362 DGSSTAA 368 DG A Sbjct: 460 DGKVVFA 466 >UniRef50_Q6AL52 Related to branched-chain amino acid ABC transporter, periplasmic substrate binding protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AL52_DESPS Length = 380 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 82/383 (21%), Positives = 152/383 (39%), Gaps = 21/383 (5%) Query: 1 MKRNAKTIIAGMIALAISHTA--MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 MK+ + A + L +S A ++IKV + A++GP + G E A+ ++ IN Sbjct: 1 MKKEIIHLFAVAVLLLMSAGASWATENIKVGAILAVTGPASFLGGPELKSAKMLVQRINR 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGI 117 GGI+G K+ + D ++A++ A +++ + + +IG S T + + Sbjct: 61 AGGIQGKKIELIVRDSGGSSEKAISFARQLIEEKEVFAIIGPSTSGETLKIKKLCQRSKT 120 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 L++S ++ + ++ +TA D Y+ + ++IA++ +G+ Sbjct: 121 LLLS-CSSADRIVFPLASYVFKTAPSDGLAVEKIFIYM-QKKGIKKIALLSGNTGFGKAG 178 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKE-NIDFVYYGGYYPEMGQMLRQA 236 R + K VV + D +A++A++K + I+ V P +L+ Sbjct: 179 KRQILKRAKKYGIEVVSSEVYDKNATDLTAIVAKIKSQPGIEAVVNWSVVPAQSIVLKNI 238 Query: 237 RSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTM---------PKRYDQDPANQGIVDA 287 R G G N AG AAEG+L P D+D Q + Sbjct: 239 RQAGWDVPIFQSHGFANIKYVQAAGAAAEGVLFPASRLIIAKQLPAGVDKDFLLQ-FKND 297 Query: 288 LKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEK 346 + + + +Y A+ LA A+++ G + + L+A G G N+ K Sbjct: 298 YENSYGEEVSTFGGHSYDALLLLANAIKQVG-LDREKVRGVLEATRGFMGTAGEFNFSAK 356 Query: 347 GDLKGFDFGVFQW--HADGSSTA 367 D G F DG Sbjct: 357 -DHSGLSIEAFTMLTVEDGKFVP 378 >UniRef50_D2RFJ3 Extracellular ligand-binding receptor n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFJ3_ARCPR Length = 457 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 79/388 (20%), Positives = 150/388 (38%), Gaps = 29/388 (7%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MKR A + + L D I + + +G ++ G + D+NA+G Sbjct: 1 MKR-AFCVAMVALLLLTPTVLAKDAIIIGFTMSQTGKYNSESKEQYQGLKLWADDVNAQG 59 Query: 61 GIKGD------KLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYE 113 GI + V YDD + + K++ D ++I S T A+ I E Sbjct: 60 GIYVKSLDKKLPVKLVFYDDESSKDRVQQLYAKLITEDNADFLISPYSSGLTASAAIIAE 119 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYI-LETVKPQRIAIIHDKQQ 172 G +MI+ GA + + +GY+HI + S A + +R+AI+++ + Sbjct: 120 QYGKIMIATGAASDSIFNKGYKHIFQVYTPASRYLTGAIDMLKAADPNAKRVAIVYENSK 179 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 + + + +V++ + +VV F+ ++G DF++ I ++ N D + GG++ + Sbjct: 180 FAKDVCTAVKEYAEENGFDVVLFEPYSSGTTDFTSFINKILASNPDAIIGGGHFADGENF 239 Query: 233 LRQARSVGLKTQFMG-PEGVGNASLSNIAGDAAEGMLVTMPKRYDQD------------- 278 +Q +K + + + I GDAA + Sbjct: 240 AKQLYEKRVKVKLISLLVAPAVPEFAEI-GDAALYVTGPSQWEPQAKYSKEIAEKLGVEW 298 Query: 279 --PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANT 336 P + V+ K+ G + Y A L A+E G+ + + + L+ T Sbjct: 299 YGPTVEQFVEQYKSAYGYEPGYHAAGGYVAGLILQKAIEDAGTLDTEKVKEALEKMDIMT 358 Query: 337 VIGPLNWDE---KGDLKGFDFGVFQWHA 361 G +++D G KG + QW Sbjct: 359 FYGRISFDTGEYYGRQKGHEMVYLQWQK 386 >UniRef50_C0CVX7 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVX7_9CLOT Length = 464 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 67/373 (17%), Positives = 130/373 (34%), Gaps = 28/373 (7%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 + I++ + A+SG A G G A +DINA GG+ G + + D D Sbjct: 72 TALTGEPIRIGAIYALSGNNAAIGTNILRGIDFAAEDINAAGGVDGRPIEIIRGDTQGDE 131 Query: 79 KQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 + A AVA +++ + + ++G S+ T+ +++ E+ I MI+ +T ++ ++ Sbjct: 132 EVARAVAKRLITEEQVHAIVGCHQSTLTEIVAEVCEEYHIPMITAISTVDSISTHHNEYF 191 Query: 138 MRTAGLDSSQGPTAAKYILET-----VKPQRIAIIHDKQQYGEGLARSVQDGLKAANANV 192 R ++S Y+ E + + IA+ D G+ R + + Sbjct: 192 FRLCPMNSLYLENMFMYMKEQAEQTGKEVKTIAVFADNSMIGQEAIRCARIYAPQYGMEI 251 Query: 193 VFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG--PEG 250 V G D + I LK D V Y + ++R + + G Sbjct: 252 VKEIQYGQGAADLTDEILELKAAGADAVLAESYVSDASLLMRTMYEQNYRPPILIAKANG 311 Query: 251 VGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSL 310 + S +EG+ + D Q I K + +Y AV + Sbjct: 312 FADPSFIPATRGMSEGVTSVVEWNPD-MTKGQEINRRFKEIFGVDMNGHSAESYTAVWTF 370 Query: 311 ATALERTGSDEPLALVKDLKANGA-----NT-----VIGPLNWDEK--------GDLKGF 352 TA E+ G+++ + L + + +++ + Sbjct: 371 KTAFEQAGTEDGETVKDVLTKIDIRESFPDGPEIILPYDRIKFEDHVFDGVRHYHNNIYA 430 Query: 353 DFGVFQWHADGSS 365 + Q DG Sbjct: 431 SVAIAQIQ-DGEY 442 >UniRef50_B2UH58 Extracellular ligand-binding receptor n=8 Tax=Burkholderiales RepID=B2UH58_RALPJ Length = 386 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 87/383 (22%), Positives = 157/383 (40%), Gaps = 15/383 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 +KR T A A+A T A DIK+ V A+SG AQ+G NG + A +INA G Sbjct: 5 IKRLLVTAAAAGAAIATGTTFAAQDIKIGVAEALSGGAAQYGVAIRNGFQLAADEINAAG 64 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GI G K+ V D+ ++A+ V K++ D + V G S+S Q A I + ++ Sbjct: 65 GINGSKIALVIEDEQGKKEEAINVFKKLIFQDKVAMVFGPTLSNSAQAADPIAQGAKTVV 124 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLA 178 T +T G + R + ++ P + +++ +++A+++ + + Sbjct: 125 FGTSNTADGVTSIG-DFVFRNSVTEADVLPATIQTVVKKAGVKKVAVLYGNDDVFTKSGY 183 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + + L+ V + G+ DF A + ++K N D + E G ++ QAR Sbjct: 184 DNFKKALEDLKIPVTTTETFAKGDVDFKAQLTKIKATNPDAIVLSALIAEGGPIMVQARQ 243 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKR-YDQDPANQGIVDALKADKKDPSG 297 +GL +G G+ + + ++A D ++ + V P + N + A A K Sbjct: 244 LGLNVPIIGGNGMNSVKVFDLAKDKSDNLWVGSPWSIENHTAENSKFITAYTAKYKAAPD 303 Query: 298 PYVWITYAAVQSLATALERTG-----SDEPLALVKDLKANGANTVIGPLNW---DEKGDL 349 + Y A+ + AL+ + A+ L G + +G Sbjct: 304 QFAAQAYDAMYIASKALKTVKFSGKLEADRKAIRDALPGVKHIGATGAFAFRQVTARGKP 363 Query: 350 KGFDFG---VFQWHADGSSTAAK 369 G+D + +G T K Sbjct: 364 AGYDAVQTPIVSVTKNGKYTIEK 386 >UniRef50_C0CV37 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CV37_9CLOT Length = 412 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 143/362 (39%), Gaps = 32/362 (8%) Query: 1 MKRNAKTIIAGMIALAISHTA------------------------MADDIKVAVVGAMSG 36 M R + ++ ++S A D I + V +SG Sbjct: 5 MNRRYVALATALVMFSMSGCAKDAGSASQGGSQSQEAGTQETGAGDEDVIVIGSVNDLSG 64 Query: 37 PIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKY 95 + G+ NG + A+++INA GG+ G ++ V YD+ D ++++ ++ + D Sbjct: 65 NRSVNGNAINNGVKLAVEEINAAGGVLGRQIKLVTYDNKNDSQESINGYTRLADLDKASA 124 Query: 96 VIGHLCSSSTQPASDIYEDEGILMIS----PGATNPELTQRGYQHIMRT-AGLDSSQGPT 150 VI SS +I + I ++ P A TQ Y ++ Q Sbjct: 125 VITSDASSICLSLVEISNQKKIPLMGMPSDPRAVMNPDTQEVYPYMFLVDQPNAPQQANI 184 Query: 151 AAKYILETVKPQRIAIIHD-KQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALI 209 AKYI ++ A+ +D Y +++ + K VV + + ++D+ + Sbjct: 185 MAKYIEANTDLRKAAVFYDQSNAYTVTNSQAFIEIWKEIG-EVVIVETCNSNDQDYKTQL 243 Query: 210 ARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLV 269 ++K +F+Y ++ M++QA GL +MG + + LS + + + Sbjct: 244 NKIKNSGAEFIYCPNMPSQLVMMVQQAVQSGLDIPYMGAMDMADPFLSLLNDPQSLSLAY 303 Query: 270 TMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDL 329 + QD Q ++ KA + Y A+ L A+E+ GSD+P A+ L Sbjct: 304 FQMVCWMQDEKIQPFFESYKAKYGEDPIVKSVNGYDAMYILKAAIEKAGSDDPEAIRNAL 363 Query: 330 KA 331 + Sbjct: 364 EN 365 >UniRef50_Q2YJA9 Leu/Ile/Val-binding protein homolog 5 n=41 Tax=Proteobacteria RepID=LIVB5_BRUA2 Length = 406 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 83/380 (21%), Positives = 154/380 (40%), Gaps = 16/380 (4%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R +AG+ + IS A D I + +SGP+A G + I INA GG+ Sbjct: 11 RVLACGVAGLSLMTISAKA-EDVITLGASVQLSGPVANTGRYYQDAYNITIDKINAAGGV 69 Query: 63 --KGD--KLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 G KL YD+ + +V ++V D + +++G S+ S I E I Sbjct: 70 KVDGKPYKLALKIYDNQSNVNLSVRQYTQLVTTDKVNFLLGPFASNFALADSVISEKYRI 129 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILE-TVKPQRIAIIHDKQQYGEG 176 M+ G + E+ R +++I T S+ + + + K +A+++ + Sbjct: 130 PMVQGGGASDEIYSRNFKYIFGTLAPASNYFGSTVEMLKGLDPKVTNVALVYADDSFDVS 189 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 +A + LK A + + DF++LI+++K +N+D V G+ E+ +RQ+ Sbjct: 190 VADGTRKLLKDAGFTIAADEKFATNSTDFTSLISQIKSKNVDAVLVAGHETEVLNFVRQS 249 Query: 237 RSVGLKTQFMG-PEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDA------LK 289 +S+ + GV G A D ++ DA K Sbjct: 250 KSLAFDPKLYSFTVGVPTEDFRKALGKDANYAFGMTAWLPSADLKDRWFGDAAKFETEYK 309 Query: 290 ADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDL 349 A + + V++ A A+E+ S +P + L + +++ GP+ +D++G + Sbjct: 310 ARFNYEPDYHAASGASDVEAFAEAIEKANSLDPQKVRDALASIKFDSLYGPIAFDKQGQI 369 Query: 350 KGFDFGVFQWHADGSSTAAK 369 V Q DG + Sbjct: 370 NLPQIVV-QVQ-DGKLVEIR 387 >UniRef50_A8S3J1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3J1_9CLOT Length = 401 Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats. Identities = 67/331 (20%), Positives = 133/331 (40%), Gaps = 6/331 (1%) Query: 23 ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAV 82 D IK+ ++ M+G G+ G + A+ + NA GGI G ++ DD AV Sbjct: 52 GDVIKIGLISMMTGDNPLNGERMNQGVQMAVDEYNAAGGINGKQIELTIVDDQTLQDMAV 111 Query: 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 ANK++ +G+ ++G S++ + + G+ + G T P+++ ++ R Sbjct: 112 TCANKLIGEGVVGIVGPHRSTNALAVEAVVKQAGVAAFT-GGTTPQISTLDNDYLFRCRA 170 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 DS AA + + +++ + + +G G ++ V +G G+ Sbjct: 171 SDSIFAEAAAA-YAKELGCKKLGLFFNNDDFGTGAEGVIKQYCADNGMEYV-EEGHNTGD 228 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG- 261 KDF+ + ++K +D V + E+ RQ +GL Q + GV + ++ Sbjct: 229 KDFTPQVMKMKDAGVDTVIIWTHDAELAIHARQIYELGLDVQVVSSPGVTMQQVIDMCKA 288 Query: 262 DAAEGMLVTMPK-RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 + EG DP + + + Y Y +L ++ G+ Sbjct: 289 EYIEGWYGVTDYVSTSDDPTLVAFKENFEKKYEIEPELYAASYYGGAVALLEGIKAAGTT 348 Query: 321 EPLALVKDLKAN-GANTVIGPLNWDEKGDLK 350 + A+++ +K +G + DE DL Sbjct: 349 DRKAVMEAVKGLKDLKVPVGVITCDENNDLV 379 >UniRef50_Q7W0W5 Putative branched-chain amino acid-binding protein n=2 Tax=Bordetella RepID=Q7W0W5_BORPA Length = 404 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 88/364 (24%), Positives = 147/364 (40%), Gaps = 19/364 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAM-----ADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKD 55 M+R A + ++ ++ A AD +K+ ++G+++GP A +G GA A + Sbjct: 7 MRRLALVALPLALSAGMAPAAAEPGVTADSLKIGILGSLTGPFAIFGSGNLAGATLAFEQ 66 Query: 56 INAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYED 114 NA GGI G KL + DD P + +A ++V + + V G S+ Q ++ Sbjct: 67 ANAAGGIHGRKLEWLSLDDESSPPKGIAAYKRLVGPEQVFAVFGPSASAVGQAMVQTFKT 126 Query: 115 EGILMISPGATNPELTQRGYQHIMRTAG-LDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 + P +T ++ RT D QG A Y L+ +K +R+A+I +Y Sbjct: 127 STTPTFISVFSTPIVTDPPLPNVFRTGPMNDREQGVAIANYALDHLKAKRVALIRQSDEY 186 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G+ SV LKA A V + + DF+A + ++ D + GY + Sbjct: 187 GKSGGESVLQRLKARGAEPVALEVFNVYDTDFNAQLTKIAAARPDVLVVYGYPNPSAIIT 246 Query: 234 RQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP----KRYDQDPANQGIVDALK 289 RQAR +G++ +G G+ I G AA G M P Q +A Sbjct: 247 RQARQLGVEGVVLGSNSAGSRKYPEIVGKAAAGTQNIMTLEILPESSSTPQAQAFREAFV 306 Query: 290 ADKKDP-----SGPYVWITYAAVQSLATALERTGS-DEPLALVKDLKAN-GAN-TVIGPL 341 A D + Y + ++R G+ LVK L++ G + P Sbjct: 307 ARFPDLARQGRPDLGDALGYGGALAFLEGIKRAGAQPTQQGLVKALESLQGFETGITLPT 366 Query: 342 NWDE 345 + Sbjct: 367 TFGP 370 >UniRef50_C7RQ13 Extracellular ligand-binding receptor n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ13_9PROT Length = 430 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 135/365 (36%), Gaps = 12/365 (3%) Query: 6 KTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGD 65 + +++L + A+ +++ +G +SG +A G NGA A++ N +GGI G Sbjct: 69 IIALLALVSLGLPGCTPAEPLQIGFLGGLSGRVADLGIGGRNGAILAVEMRNQRGGINGR 128 Query: 66 KLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGAT 125 ++ + DD D + A +++ ++ +IG + S+ G+ +ISP T Sbjct: 129 QVELIVDDDQQDAEVARQAVARLLARKVELIIGPMTSAMALAVLPQVNAAGVPLISPTVT 188 Query: 126 NPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD--KQQYGEGLARSVQD 183 LT Q R ++ P +A+Y +R+ +++D + Y E A + Sbjct: 189 TNVLTGLDDQ-FFRVVSPTAAHAPKSAEYHFRQHGLRRVVLVYDLRNRAYSESWAGDFRS 247 Query: 184 GLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKT 243 +A +V G + FS L + + D V + +++Q R Sbjct: 248 AFEARGGLIVAAIGFDSSTT-FSTLASGVLTHRPDGVVVIANSMDTALLIQQLRMRDATV 306 Query: 244 QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWI 302 + E L + G A EG++V + PA A + G Sbjct: 307 RIATSEWAATERLVELGGRAVEGVVVAQYVDRESSEPAYLQFHRAYRERFAQEPGFPGLT 366 Query: 303 TYAAVQSLATAL--ERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH 360 + A AL + G ++ L P+ +D GD + + Sbjct: 367 AFDATNVALDALASKSAGQTLKESI---LAHGKFAGAQTPIVFDANGDTQRDTYLW--VI 421 Query: 361 ADGSS 365 +G Sbjct: 422 RNGEF 426 >UniRef50_D2B8C1 Extracellular ligand-binding receptor n=2 Tax=Streptosporangineae RepID=D2B8C1_STRRD Length = 400 Score = 279 bits (716), Expect = 9e-74, Method: Composition-based stats. Identities = 97/354 (27%), Positives = 158/354 (44%), Gaps = 11/354 (3%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDA 75 S A + +K+ +G ++GP A NGA+ I + N K+ VEYD Sbjct: 37 GGSSAAASGTVKIGFMGDLTGPNAGIVIPPRNGAKLVIDEYNKTN--PAVKVELVEYDSQ 94 Query: 76 CDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 DP +AVA+A + + D + +IG S + + E+ I I+ ATN +L + G+ Sbjct: 95 GDPSKAVALAQQAIKTDKVASMIGPAFSGESAQVGPVLEEAAIPSITASATNTKLAENGW 154 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + R DS QGP A +I + + +I DK +YG+ LA +V+ L + A V Sbjct: 155 KFWHRILPNDSVQGPGIADFIAGAAAAKNVFVIDDKSEYGKPLADAVRTQLTSKGAKVT- 213 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK-TQFMGPEGVGN 253 D + E DFS+++ ++ D +++GGYY G +L+Q R G+K +F +G + Sbjct: 214 DDSLDPAESDFSSVVNKVAAAKPDAIFFGGYYAAAGNLLKQLRDKGVKDAKFFSGDGSLD 273 Query: 254 ASLSNIAG-DAAEGMLVTMPK----RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQ 308 L + AG AEG LV P D +G DA KA Y Y A Sbjct: 274 RGLIDGAGAPNAEGALVGCPCYIATPDVTDAKVKGFADAYKAAFSADPSIYAAEGYDAAT 333 Query: 309 SLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 A+ + G+ P + + V + + G+++ D ++Q Sbjct: 334 VFIEAI-KAGNTTPDKINTFIGTVDLAGVSKQVKFGPNGEVEAKDIYMYQVKDG 386 >UniRef50_A0RN18 Branched-chain amino-acid ABC transport system periplasmic binding protein n=31 Tax=Campylobacteraceae RepID=A0RN18_CAMFF Length = 372 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 15/374 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ + + IAL + + MA +IK+ VV ++G +A +G + G A K Sbjct: 1 MKKIS---LVASIALVAATSLMAKEIKIGVVMPITGAVAAYGQTAWAGIEMANKL--EPT 55 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GD L + D+ D + ++V +D + +IG + + +TQ I +++ + M Sbjct: 56 LKNGDTLKLILVDNKGDKVETTTATTRLVSDDKVTGLIGAMVTGNTQQVLQIADEKKVPM 115 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQR-IAIIHDKQQYGEGLA 178 I+P AT +L R ++ R +DS QG + A Y +++ + + ++ Y GLA Sbjct: 116 IAPAATADKLLDR-AKYGARVTFMDSFQGTSFATYAAKSLGLKTAVVVVDQSTSYSIGLA 174 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 ++ + + V+ I++G+KDF A+++++ N VY Y+PE ++RQAR Sbjct: 175 KAFKKQYEKDGGKVLKELKISSGDKDFKAIVSQIGSLNPSIVYMPFYHPEAALVVRQARQ 234 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP--ANQGIVDALKADKKDP- 295 +GLKTQF +GV N + +AGDA+ G T P ++ V A +K D Sbjct: 235 IGLKTQFASGDGVSNDTFIELAGDASNGYFYTDAFDSSNPPTDKSKEFVAAYTKEKGDGN 294 Query: 296 SGPYVWITYAAVQSLATALERT-GSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFD 353 + + + + A+ R ++ + K +K V G +N D KG+ Sbjct: 295 VPGFTALGADSYFLMVDAMNRCENPEDRECVNKKIKETKNFEGVSGIINIDSKGNAIRS- 353 Query: 354 FGVFQWHADGSSTA 367 V + DG + Sbjct: 354 -VVIKEVKDGRAVY 366 >UniRef50_D2SCY2 Extracellular ligand-binding receptor n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SCY2_9ACTO Length = 392 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 145/354 (40%), Gaps = 9/354 (2%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 + ++ + V +++G A +G+ + G A + KGG+ DD DP Sbjct: 45 SCTIGGEVPIGAVLSLTGAAASYGESQQRGLELAAAQLAEKGGV---TYDLRIEDDQTDP 101 Query: 79 KQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 +Q + + ++ VNDG+ +IG S++ A I ++ G+ ++ T +T+ G +I Sbjct: 102 RQGITLFDQFVNDGVSLIIGPTLSNAAVQADPIAQEAGVPVLGISNTAAGVTEIG-DYIF 160 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDG 197 R + + + P E Q + +++ + E ++ L+ V Sbjct: 161 RNSLTEQAVIPQTIATATEEFGLQDVVVMYSNDDAFTESGYQAFAAALEEQGVTVSETIT 220 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 + + DF AL+ + ++ + D + ++ QAR +G+ +G G N L Sbjct: 221 FSKADTDFRALLTQAQQSDPDAIVVSALIEAAIPLVTQARELGIDVPIIGGNGFNNPRLM 280 Query: 258 NIAGDAAEGMLVTMPK-RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 AG AAEG++V +P N + +A+ + YA + + A+ Sbjct: 281 ADAGQAAEGVVVGAAWNSASDNPENTAFLADFEAEYGAQPDQFAAQAYAGLMLVDQAVRA 340 Query: 317 TGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + + +L + L + TV+G + DE D V Q DG+ + Sbjct: 341 NCAADRESLKQALGELENVPTVLGEFSIDENRDAVHPA--VVQVVRDGTFAVLE 392 >UniRef50_Q1AZ39 Extracellular ligand-binding receptor n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZ39_RUBXD Length = 413 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 77/359 (21%), Positives = 141/359 (39%), Gaps = 17/359 (4%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI---KGDKLVGVEYDDACDPKQ 80 + IK+ + ++GP+A G + AI+DIN GGI G KL + D +P+ Sbjct: 33 ETIKIGSLHPLTGPLAVDGKRMDQAVKMAIEDINKAGGIEALDGAKLEFISGDTKGEPET 92 Query: 81 AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRT 140 A + A +++++G ++G S++ + E + I AT + +GY++ R Sbjct: 93 ASSEAQRMIDEGAVALVGPYTSATAATIARTAERSQVPFIIDVATADSILAQGYRYTFRI 152 Query: 141 AGLDSSQGPTAAKYILE-----TVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFF 195 + G A+Y+ E + +A IH+ ++G + + Q + VV Sbjct: 153 QPGSQTMGEYGARYLKEISEAQGSPVESVAYIHESSEFGTSVFEAFQKEAQRLGIEVVRE 212 Query: 196 DGITA-GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP---EGV 251 A D ++ + + K + D + GYY + + + A +V + + Sbjct: 213 ITYDALNVSDLTSELTQAKAADADVIVATGYYRDGLLLAQAAANVKPDVKAVYGVANGAF 272 Query: 252 GNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 + AGD L + + + + + +Y AV+ +A Sbjct: 273 DLDTFPEDAGDNGNYYLSSNYHYDATSDRARKLRQRFEERTGESMRTAAVFSYQAVEVIA 332 Query: 312 TALERTGSDEPLALVKDLKANGANT----VIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 ALER GS EP L + T GP+ +D++G V Q DG Sbjct: 333 DALERAGSSEPQELRDAIAETSLQTELFPFDGPIEFDDRGQNVNAQPIVMQVQ-DGEVV 390 >UniRef50_A7HUK3 Extracellular ligand-binding receptor n=6 Tax=Alphaproteobacteria RepID=A7HUK3_PARL1 Length = 403 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 80/384 (20%), Positives = 142/384 (36%), Gaps = 17/384 (4%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD--DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 MKR A ++ G L + I++ +++G + G NG A+K IN Sbjct: 1 MKRVAASLFLGTALLWAGAAPAEEIGTIRLGAAVSLTGKYSSNGAFTRNGYDLAVKRINE 60 Query: 59 KGGI--KGDK--LVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYE 113 +GG+ G + L + YDD P + + +++ DG+KY++G S T+ + + E Sbjct: 61 EGGVTVAGKRYNLAVIYYDDESTPARGAQLVERLIQQDGVKYLLGPYSSGLTEAIAPVTE 120 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYIL---ETVKPQRIAIIHDK 170 G+ M+ L ++GY+++ A + E R+A+ + Sbjct: 121 KYGVPMVEANGAAVSLFRKGYRYLFAVLSTTDQYLRGAVELAASVNEDPSKLRVAMAFEN 180 Query: 171 QQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMG 230 + + + V + +V D + D SA +++ K D + G+ Sbjct: 181 DPFSQDVREGVMEDAAKFGMKIVIDDKLPPELNDMSATLSKAKVLKPDLLLVSGHDKGAA 240 Query: 231 QMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPA------NQGI 284 ++RQ + + +A ++ G AE L + Sbjct: 241 LVVRQLADQRVDVPMVAITHCDSAQIAEKFGKIAEYTLCAAQWASTLKYSDALFGSAADY 300 Query: 285 VDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWD 344 + + + AAVQ A A ER GS EP A+ L T GP+ +D Sbjct: 301 AALYEETYGHAAPYQAAESSAAVQVFADAFERAGSLEPDAVRDALAETDIKTFYGPVKFD 360 Query: 345 EKGDLKGFDFGVFQWHADGSSTAA 368 E G +FQ DG Sbjct: 361 ETGKNISKPTVLFQVQ-DGKYVVV 383 >UniRef50_B8FZ96 Extracellular ligand-binding receptor n=3 Tax=cellular organisms RepID=B8FZ96_DESHD Length = 380 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 106/376 (28%), Positives = 167/376 (44%), Gaps = 15/376 (3%) Query: 2 KRNAKTIIAGMIA--LAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 K A I G+ L + +++I + V A D+ G A+++IN + Sbjct: 9 KSLAMIFILGLSLWPLGCTQVNPSEEIFIGVAWP----FASLDDLFAEGLELAVQEINEQ 64 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG++G KL V+ DD + ++ +A+A ++ GI+ VIGH S + PA+ IY+ G++ Sbjct: 65 GGVQGRKLSLVKADDEAELEKGLAIAQAFADNAGIQAVIGHRNSFISIPAASIYDQAGLV 124 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 M+SP +T+P+LT GY H+ R D A Y+ E +R+ I + YG GLA Sbjct: 125 MLSPASTSPDLTDHGYIHVFRNIPSDQEIARQLAIYLAEQ-GHERMVIYYTDDSYGNGLA 183 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQ-MLRQAR 237 + +D +A +V KD L + + +D ++ G L A+ Sbjct: 184 NAFEDYARAQGITIVDRFNYYGNLKDLERLYDKWQAFGMDGIFIAKTATGGGTEFLVDAK 243 Query: 238 SVGLKTQFMGPEGVGNASL---SNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKK 293 SVG++ + SL G AEG+LV D Q V+A + + Sbjct: 244 SVGIEVPLIAGNSWDALSLTEDIENIGMTAEGLLVGSFFNPQRPDSRTQDFVEAFRREYG 303 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGF 352 P Y Y AV LA ALE++ P L + L+ G V+G +D +GD G Sbjct: 304 QPPTSYAAAGYDAVILLAEALEKSDLTHPATLAQGLRDLGPWEGVMGMHRFDGRGDDIG- 362 Query: 353 DFGVFQWHADGSSTAA 368 D V + DG Sbjct: 363 DLVVLKKMKDGRFEYL 378 >UniRef50_C6WB66 Extracellular ligand-binding receptor n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WB66_ACTMD Length = 392 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 89/342 (26%), Positives = 147/342 (42%), Gaps = 9/342 (2%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 +K+ +G ++G + NGA+ A + NAK K+ VEYD P+QA ++ Sbjct: 40 VKIGFMGDLTGENSAIVIPPRNGAKLAFDEYNAKN--PKVKIELVEYDSQGKPEQATSLI 97 Query: 86 NKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLD 144 K V +D I +IG S ++ + + I ISP ATNP L G+ R D Sbjct: 98 TKAVGSDKISALIGPAFSGESKAIGGVLDQNKIPSISPSATNPGLAANGWSFWHRVVAND 157 Query: 145 SSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD 204 QGP A ++++ P++ ++ D Q+Y GLA +V + A V D + D Sbjct: 158 DDQGPGIADFLVKAKSPKKAFVLSDDQEYSTGLADAVAKAFEGAGVA-VEKDRFSKDASD 216 Query: 205 FSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS-NIAGDA 263 +S+++ ++ N D + YGGYY + G++L+Q R + F +G +A L A Sbjct: 217 YSSVVTKVASANPDVIVYGGYYAQAGRLLKQLRDSNVTAPFASGDGSLDAQLVSAAGAQA 276 Query: 264 AEGMLVTMPK---RYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 AEG ++ P D + D K Y Y A + A+E G+ Sbjct: 277 AEGAILACPCNIPSADVTGPLKSFYDNYKKATNADPAIYATEGYDAATAYIKAIE-AGNT 335 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 + LK V P+ + G+ + ++Q Sbjct: 336 TSEKINDFLKTADFEGVSKPIKFKANGEPENNAIFIYQVKGG 377 >UniRef50_Q0FY58 ABC transporter substrate-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FY58_9RHIZ Length = 406 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 79/373 (21%), Positives = 145/373 (38%), Gaps = 18/373 (4%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIA-QWGDMEFNGARQAIKDINAKGGI 62 +AL +S + IK+ + +S P Q G+ +G R A++++NA GGI Sbjct: 6 KLSATALVAVALGVSAAQAQETIKIGGIAPLSPPGGVQTGESLRDGMRVAVEELNAAGGI 65 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 G ++ V D + P++ VA ++ + + + V G S+ + E I I+ Sbjct: 66 DGREVELVVEDTSGVPEKGVAAFERLASSENVVAVTGSAHSAVCSAVGPVAEKYDIPFIA 125 Query: 122 PGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 + ++T + R +S AA + ++ + IAII + +G G+ Sbjct: 126 GECWSDDVTAAQIPEVFRITVANSLVYSVAADW-VKEAGFKNIAIISENSDWGFGIIDVF 184 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENI--DFVYYGGYYPEMGQMLRQARSV 239 LK ANV F DF+ + +LK+ + D + G + MLRQA + Sbjct: 185 TSNLKDTGANVTSF-TAERTVSDFTPQLLQLKRADPQPDLIVAGFTGSNLLLMLRQAYDL 243 Query: 240 GL-----KTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRY--DQDPANQGIVDALKADK 292 G+ F V N+ GDA ++ ++ A + + Sbjct: 244 GVAPSPQTAIFAAGSDVLEPEFWNVMGDAGTYVIGNPAGLPGKPDTELSRSFSKAYEEEF 303 Query: 293 KDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDL--- 349 P+ Y V +A A++ GS E AL + L+ + G + + + D Sbjct: 304 SRPANAVAMEGYDGVMVIAEAIKAAGSTEGPALQEALRNLRWSGTRGEIYFPQTTDPAWQ 363 Query: 350 --KGFDFGVFQWH 360 + + +F Sbjct: 364 YQQWPEVPIFVIQ 376 >UniRef50_B6WW20 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WW20_9DELT Length = 372 Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 81/362 (22%), Positives = 147/362 (40%), Gaps = 12/362 (3%) Query: 1 MKRNAKTIIAGMIALAIS---HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 M + ++ G++ +++ T A+ + + + ++G A A+ A K N Sbjct: 1 MLKKILHVLVGVLGISVCFSGSTLAAEPVLIGMNTPVTGAAAGEAVYFMKAAKLAEKHAN 60 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEG 116 A G + + D+ A+A NK + D I ++G + S+ SD + Sbjct: 61 AA----GYNIKLLIQDNQSTNPGALAALNKSIEQDHIFALLGPIKSTQVLAISDRVKQTE 116 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 + + G TN LTQ+G + R DS KYI E + +IA++HD +G G Sbjct: 117 LPTL-IGGTNVNLTQQGNPWLFRCRPDDSIVVKVMLKYIKEDMGLTKIAVLHDADAFGTG 175 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDF-VYYGGYYPEMGQMLRQ 235 A + D A VV + T +KD++A + + + ++YG ++ RQ Sbjct: 176 GADLIDDLAPKAGLTVVKREKYTTKDKDYTAQLLAFRVAGAEVMIHYGTNAEDVAVCQRQ 235 Query: 236 ARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDP 295 R +GL ++G ++AG AAEG+L P +A K + + Sbjct: 236 YRQLGLPYAYIGSPSSAVKDTIHLAGKAAEGILAIADATPGGSPEYTAYSEAYKKEYGEE 295 Query: 296 SGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDF 354 + Y A+ LA A+ G + + + + V+G ++ GD + Sbjct: 296 MDAWAAWNYDALMILAKAIHEVGP-DRNKVREAILNLRDYRGVLGIYSFSPNGDGRHSAC 354 Query: 355 GV 356 V Sbjct: 355 VV 356 >UniRef50_Q2J3V7 Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2J3V7_RHOP2 Length = 406 Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 68/375 (18%), Positives = 137/375 (36%), Gaps = 14/375 (3%) Query: 6 KTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI--K 63 I A + IS + D IK+ ++GP+A + G + N GGI Sbjct: 16 LGIAALASGIQISAASADDVIKIGAPLPITGPLAPEAIKQQQGYNLWAEQANKAGGISVG 75 Query: 64 GDK--LVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMI 120 G K + V D + +AV +++ + +V S + + AS + E + + Sbjct: 76 GKKYKVEIVYTDYQSNTPRAVQATEQLITQNNVNFVFSPFGSGAAKAASTVSEKHKVPTL 135 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK-PQRIAIIHDKQQYGEGLAR 179 + A++ ++ +GY+++ T + + + I V +++AI+ + +A+ Sbjct: 136 AATASSSQVYDQGYKYLFGTFTPNDTLTTPLTEMIKAKVPEVKKVAILARNDLFPLAIAQ 195 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 ++ KA VV+F+ G D SA ++ +K ++ +++ GY ++ + +Q Sbjct: 196 EMEKSAKANGLEVVYFEKYAIGTLDHSATLSSIKAQSPQWIFVTGYTNDLLLVRKQMIDQ 255 Query: 240 GLKTQFMGP-EGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQG-------IVDALKAD 291 +K + G + G AE + + V K Sbjct: 256 QMKAPVVSMIAGPAYQEFIDALGKGAENVSSAAWWHPAARYDGKDIFGSTANFVKLFKDK 315 Query: 292 KKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKG 351 A+E+ GS + + +L T GP+ + G + Sbjct: 316 YNAEPDYAHASAALCGALFQIAIEKAGSIDRDKVRDELAKMDVVTFFGPVKFGANGQINS 375 Query: 352 FDFGVFQWHADGSST 366 D VFQ Sbjct: 376 LDPPVFQIQGGKPVV 390 >UniRef50_C8X5B7 Extracellular ligand-binding receptor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B7_DESRD Length = 377 Score = 276 bits (708), Expect = 8e-73, Method: Composition-based stats. Identities = 86/350 (24%), Positives = 142/350 (40%), Gaps = 11/350 (3%) Query: 26 IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVA 85 I + G+++G + G NGA AI++INA+GGI G L V DD DPK A AV Sbjct: 28 IPIGFTGSLTGSYSDLGVQGRNGATLAIEEINAQGGIAGHPLRLVVRDDGNDPKTAKAVD 87 Query: 86 NKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDS 145 +++ G+ +IGH+ SS + A + D ++++SP + P L+ + + R + Sbjct: 88 RELIERGVVAIIGHMTSSQSVAALPVVNDAEVVLLSPTTSTPRLSGKD-DYFFRIQTSTA 146 Query: 146 SQGPTAAKYILETVKPQRIAIIHD--KQQYGEGLARSVQDGLKAANANVVFF--DGITAG 201 +Y + QRI +I D Y + QD + VV + Sbjct: 147 QAARALGRYARNQLDLQRINVIEDTSNAAYTTPFLTNFQDTFCHSG-QVVGQHCRFHSEM 205 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 E+D+ L L + D + + +L R + + SL + G Sbjct: 206 EQDWQLLADCLLQTPSDGILLLTSARDAASLLPILRHKAPQRVILSSGWATTRSLLTLGG 265 Query: 262 DAAEGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 +A + +++ A + VDA + Y AV+ LA AL TG Sbjct: 266 ASANQVYAAERNFPAERNTAYRHFVDAYRQRFGAFPSFAAVNGYDAVRVLARALTDTGG- 324 Query: 321 EPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + L + L ++ GPL +D GD +FQ +GS + Sbjct: 325 QRDGLRRALANIEKFPSLFGPLGFDAFGDALAPT-HIFQVQ-NGSYALLE 372 >UniRef50_A8S3D2 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S3D2_9CLOT Length = 415 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 134/348 (38%), Gaps = 7/348 (2%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 +A D I++ + ++G + G+ N A+ ++IN +GG+ G + V D Sbjct: 53 PSASGDPIRIGLTTVLTGDRSLEGEYASNAAKIITEEINTQGGVLGRPIEIVIEDALGTD 112 Query: 79 KQAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY--- 134 AV K+ +D I ++G S+ S + IL + ++P L Sbjct: 113 VGAVNAYRKLASDDSIVAIVGPDSSNDGMAQSPSALEFKILT-TAQGSSPTLKNMCNNDN 171 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 ++ + D + KY +E + + A++HD + AR + LK+ V Sbjct: 172 PYLFQLRACDDTLCAALIKYSVEELGIKSYAVMHDTETSSADQARLFTEALKSYGIEPVV 231 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNA 254 T G KDFS+ IA+++ D + + E +++Q RS+G++ +G G + Sbjct: 232 TVPFTTGTKDFSSHIAQVQASGADAIIGAAFQTEAAILIQQIRSLGIEAPILGSNGFADP 291 Query: 255 SLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATA 313 +AG+ + + + +P + + K D G Y + + A Sbjct: 292 VTIQLAGELNDNVYCASAWVPNTPNPKGAALAEKYKELYGDDCGKAAAQIYDHISVICEA 351 Query: 314 LERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWH 360 + GS + A+ + + I + GD V Sbjct: 352 ITLAGSTDREAVREAMNTIGDYQGAITKYDCRTNGDCGRGGLLVKVVK 399 >UniRef50_C2KVU8 Branched chain amino acid ABC superfamily ATP binding cassette transporter, binding protein n=5 Tax=Clostridiales RepID=C2KVU8_9FIRM Length = 401 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 98/405 (24%), Positives = 172/405 (42%), Gaps = 40/405 (9%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD------------------------DIKVAVVGAMSG 36 MK+ ++A ++A ++ A K+ G ++G Sbjct: 1 MKKQLSMVLAALMAASLVACGGASGEKKATEAESKANAESSGSEKSGLTWKIGGQGPLTG 60 Query: 37 PIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYV 96 A +G+ NGA AI +INA GGI G ++ + DD D ++A+ N + + G++++ Sbjct: 61 GAAVYGNAVVNGAEIAIDEINANGGINGYQIEYKKADDEHDQEKAINAYNSLKDWGMQFL 120 Query: 97 IGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYIL 156 +G S+ E + + ++SP + E+T +++ R D +QG +A+YI Sbjct: 121 VGPTTSAPAIAVGTEAEGDNMFVLSPSGSAVEVTAP--KNVFRVCFSDPAQGTKSAEYIG 178 Query: 157 ETVKPQRIAIIHDKQQ-YGEGLARSVQDGLKAANANVVFFDGITAGE-KDFSALIARLKK 214 ++I II+D Y G+ S VV + TA KDFS + ++K Sbjct: 179 SHNLGKKIGIIYDSSDVYSSGVHDSFVAEAPKQGLEVVADEQFTADSNKDFSTQLQKMKD 238 Query: 215 ENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG-DAAEGMLVTMPK 273 + V+ YY E +L QA ++G K F G +G+ AEG+++ P Sbjct: 239 SGAELVFLPFYYSEAALVLTQANTMGFKPTFFGCDGMDGILNVENFDVSLAEGLMLLTPF 298 Query: 274 RYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG-------SDEPLAL 325 D +D V K K+ + Y AV ++ A+E+ G SD A+ Sbjct: 299 AADAKDDLTVNFVKNYKEKYKETPIQFAADAYDAVYAIKAAVEKAGLTPDQSVSDLGTAM 358 Query: 326 VKDLKANGANTVIGP-LNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 K + + + G + W+E GD+ V DG+ +A+ Sbjct: 359 EKAMTEISLDGLTGTGMKWNEAGDVDKEPKAV--IIKDGAYVSAE 401 >UniRef50_A6UKD7 Extracellular ligand-binding receptor n=2 Tax=Sinorhizobium RepID=A6UKD7_SINMW Length = 390 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 78/375 (20%), Positives = 158/375 (42%), Gaps = 12/375 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD--IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 M + +K +A S + ADD I + +M+G A +NGA+ A+K +N Sbjct: 1 MIKTSKLFLAAAGIALASSASFADDDKIVIGGALSMTGIQAPLDTPGYNGAQVAVKFLND 60 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGIL 118 GG+ G ++ + D DP VA ++++ G + ++ PAS + G++ Sbjct: 61 NGGVLGKQIEFINIDGKSDPVTVGNVAVELIDKGAQVIVAPCDFDFGSPASREAQSAGLV 120 Query: 119 MISPGATNPELTQRGY-QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ-QYGEG 176 IS A++P + + +++ G TAA + ++ + ++ D+ Y + Sbjct: 121 GISTCASDPLYSSWSLGDKQFTLSMWNTTMGATAADFAVKEKGWKTAYVVTDQFIAYTKS 180 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKK--ENIDFVYYGGYYPEMGQMLR 234 L++ + KA ++ D T G+ +FSA +ARL+ + D ++ Y ++G ++R Sbjct: 181 LSKYFVEQFKANGGEILLEDTYTNGDNNFSAQLARLQALGKKPDVIFVSSYGTDIGVIIR 240 Query: 235 QARSVGLKTQFMGPEGVGNASLSNIAGDA-AEGMLVTMPKR--YDQDPANQGIVDALKAD 291 R VG +G + + ++ G+ + + P ++ Sbjct: 241 ALREVGYDAPVLGGDAYDDPAMHQALGEQFGNHVYFVTHTWMGPEAHPEMPKFIELYTEM 300 Query: 292 KKDPSGP-YVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNW--DEKGD 348 +V + + LA A++ G+ E AL K L+ + G L++ +E+G Sbjct: 301 FGKAPDTSFVSTGWDTIMLLAEAIKAAGTTEGAALAKALEDGQFKLLTGDLDYGTNEEGH 360 Query: 349 LKGFDFGVFQWHADG 363 + V + A Sbjct: 361 VPNKAAAVIELKAGK 375 >UniRef50_Q4FMW4 Probable Leu/Ile/Val-binding protein n=1 Tax=Candidatus Pelagibacter ubique RepID=Q4FMW4_PELUB Length = 418 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 77/397 (19%), Positives = 141/397 (35%), Gaps = 32/397 (8%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK+ ++ + + + A+++K+ V+ ++GP+AQ G + A+ IN Sbjct: 1 MKKIILSVFTFLSLVCAPTISAAENVKIGVLYPLTGPVAQVGKDAVAAVQTALDIINNSH 60 Query: 61 GIKGDK--------------LVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSST 105 I G + V D P V K++N D + + G SS T Sbjct: 61 NIPGMPLAKDAGLKGLGGGKISIVVGDHGGKPDIGVGETEKMLNSDKVHAMFGAYYSSVT 120 Query: 106 QPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYI-----LETVK 160 AS + E GI ++ +T+P+LT RG+++ R D +++ K Sbjct: 121 GAASQVSERAGIPWVNGESTSPKLTTRGFKYFFRVTPHDGEFTQLMFEFMDDFNTKNGNK 180 Query: 161 PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFV 220 + + IIH+ +G + K VV A S+ + RLK +N D + Sbjct: 181 LKTLGIIHEDTLWGADSGGTQNTMAKDKGYKVVEKISYKAKTTSLSSEVQRLKAKNPDVL 240 Query: 221 YYGGYYPEMGQMLRQARSVGLKTQFMGP--EGVGNASLSNIAGDAAEGMLVTMPKRYD-- 276 Y + L A+ + + + G + G AEG++ P D Sbjct: 241 LPSSYTADAYLFLNTAKELDYNPKLLVAQNAGYTDPKFIATMGSKAEGVITRSPFNTDLA 300 Query: 277 -QDPANQGIVDALKA-DKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA 334 P + + K + +LA A+ GS +P + + L Sbjct: 301 TTIPMIGTVNEIFKTHSGGRDLSDVPARAFTGFMALANAINNAGSTDPEKIRQALVDLDM 360 Query: 335 NT-----VIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 ++ + + G + + Q DG Sbjct: 361 SSDSLIVPYRGIKFGADGQNEKTRGILMQVQ-DGKYC 396 >UniRef50_B0TAM9 Branched-chain amino acid abc transporter, amino acid-binding protein n=2 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAM9_HELMI Length = 414 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 86/401 (21%), Positives = 153/401 (38%), Gaps = 34/401 (8%) Query: 1 MKRNAKTIIAGMIALAISHTAMADD------------IKVAVVGAMSGPIAQWGDMEFNG 48 M + + ++ A +K+ + SG A WG Sbjct: 16 MSILSLLTATMLAGCGGGSSSTAKTGGGSAGSSSGNVVKIGALVDKSGKGADWGKKNEIA 75 Query: 49 ARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPA 108 AR A+ +INA GGI G K+ V D + AV + + ++G+ ++G S + A Sbjct: 76 ARIAVDEINAAGGINGAKIELVVKDTGGKNEDAVNLTRTLADEGVAAIVGPFFSGECEVA 135 Query: 109 SDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH 168 G+ +ISP + ++++ R + D A ++ + +A+IH Sbjct: 136 FPQANKLGVPIISPSSAKAGVSEKNRPWAFRNSMTDDKLLRDATPLFVKAYNVKTVAVIH 195 Query: 169 D-KQQYGEG-LARSVQDGLKAANANVVFF---DGITAGEKDFSALIARLKKENIDFVYYG 223 D K + + + + KAA N+V GE +F+A++ ++K N D + +G Sbjct: 196 DEKDAWSKAVGSTDLPREFKAAGVNIVNEGNYLTYKTGETNFAAIVTQIKTMNPDAIAFG 255 Query: 224 GYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTM-PKRYDQDPANQ 282 G Y E ++ GLK +G G+ +A+L G A E + T Y +P + Sbjct: 256 GLYNEAASFAKEMERQGLKKPVLGGVGMYSAALIQQGGKAVEDFVATSCFNVYADNPRVK 315 Query: 283 GIVDALKAD------KKDPSGPYVWITYAAVQSLATALERT---GSDEPLALVKDLKA-- 331 VD K + D G + Y ++ L++ GS L +K Sbjct: 316 SFVDKFKPEAAKITPADDLPGSFEAQFYETFYMISNVLKKANKNGSTPVADLRNTIKDGL 375 Query: 332 ---NGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 + G + D+KGD + + +G K Sbjct: 376 ANLKDFEGLTGKTSIDDKGDGIKASYPM--VVKNGKYEVLK 414 >UniRef50_Q73K61 High-affinity branched chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Treponema denticola RepID=Q73K61_TREDE Length = 385 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 90/351 (25%), Positives = 156/351 (44%), Gaps = 9/351 (2%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG-GIKG-DKLVGVEYDDACDPK 79 I A G ++G Q+GD E A+KDIN G G+ G K++ YDD D K Sbjct: 34 ATKPIYFAWYGPLTGDAKQYGDTEKIAVELALKDINDAGNGVLGGRKIIVDFYDDKNDAK 93 Query: 80 QAVAVANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIM 138 +AV +ANKIV + V+G S+ + A+ IYE I+ SP +++ + + G + + Sbjct: 94 EAVNIANKIVAEKKYLAVVGGFGSTPSMAAAPIYEKAKIINYSPTSSHADFSSLG-KFMF 152 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 R + A Y+ + + +AI++ +G +A+ + + Sbjct: 153 RNTPTQQIETTQYADYVYTKLGIKSVAILNVNDDWGNNIAKIFTNEFVKLGGKITDLQTY 212 Query: 199 TAGEK-DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 + DF+ +I++ K N + + YY + ++RQA+++ Q + L Sbjct: 213 IPNQTSDFTPMISKAKTTNPEAFFPVAYYQDSANIVRQAKNLDFNVQMILSSSTLKQELI 272 Query: 258 NIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALER 316 ++AGD EG + D + P ++ +V TY V+ LATA++ Sbjct: 273 DLAGDIVEGAFIMNAYSPDINTPEFIRVIGEYTKRTGKQGDAFVMQTYDVVKQLATAVDM 332 Query: 317 TGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 GSD+P+ + + L G N + GP N +E GD +F +G T Sbjct: 333 AGSDDPVVVRETLANMKGYNALSGPYNMNELGDAVRSLVPMF--IKNGKFT 381 >UniRef50_A4TXB9 Branched-chain amino acid ABC transporter system substrate-binding protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXB9_9PROT Length = 380 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 128/357 (35%), Gaps = 14/357 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK + A + +LA D I++ + +G ++ GD E + INA+G Sbjct: 1 MKFLRVLLAASVFSLAAQPAMAVDPIRIGSFLSATGVMSPMGDPEKKTLEMEVARINAQG 60 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILM 119 G+ G L V YDD P++AV A +++ D + +IG + ++ + + + Sbjct: 61 GVLGRPLELVFYDDGSVPEKAVVAAKRLIESDRVDVIIGGSGTPTSLTVLPMMDKAEMPF 120 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 +S G + + + + D + + +IA++ + +G+ Sbjct: 121 LSLGGGVAII-EPVRKWTFKVPQTDRLAAQKVYGDM-QRRGLSKIALLSENVGFGKSGRT 178 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKE-NIDFVYYGGYYPEMGQMLRQARS 238 + + +V + + D + + R++ + ++ G + R R Sbjct: 179 QCLELAASHGMEIVADETYGPRDPDVTVQLTRIRATPGVQALFVFGTGQGPAVVTRNIRQ 238 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGM------LVTMPKRYDQD---PANQGIVDALK 289 + L+ GV + + G AA+GM L + D D P + Sbjct: 239 LDLQMPVYQSHGVASKDFLRLVGKAADGMRLPSSPLAIVDVLPDSDRQKPVLAAFKRDFE 298 Query: 290 ADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDE 345 D ++ A+ A++R + + + +++ G G Sbjct: 299 TRTGDEVSMMAGHSWDALYLYVDAVKRANTTDKARVRDEIERTRGFVGQGGIFTLSP 355 >UniRef50_A0LQF9 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LQF9_SYNFM Length = 339 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 9/277 (3%) Query: 1 MKRN--AKTIIAGMIALAISHTAMADD----IKVAVVGAMSGPIAQWGDMEFNGARQAIK 54 MK+ ++I + +A MA I+V VV ++G ++++G++E N ++ Sbjct: 1 MKKLTIIISLIVAVALVAWVEATMAGPQESPIRVGVVLPLTGNLSKFGNIEKNSFNMGLE 60 Query: 55 DINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYE 113 +INA GG+ G + V DDA + + K+V D + + G S T + + Sbjct: 61 EINAAGGVNGRPIELVFADDASRIETGRSAVEKLVVQDKVVALTGGYSSDVTLAVAFLAN 120 Query: 114 DEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQY 173 I + +T+R + ++ R S T +++ +K + +AI+HD + Sbjct: 121 RLRIPFLVTTGAADMITERDWDYVFRINQPISEYSKTLIEFLHGELKYKSVAILHDSGLF 180 Query: 174 GEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQML 233 G A + +V +G G DF L+ + K D VY Y E ++ Sbjct: 181 GRAGAIEFSEHATELGWKIVLQEGYEPGTVDFKPLLGKAKAAKPDVVYMISYVHEAALLM 240 Query: 234 RQARSVGLKTQFMGPEGVGN--ASLSNIAGDAAEGML 268 +Q++ + + G G +AG AAE + Sbjct: 241 KQSKELNFAPKVFAGAGAGFTLPEFYELAGSAAENVF 277 >UniRef50_A8KXL9 Extracellular ligand-binding receptor n=8 Tax=Frankia RepID=A8KXL9_FRASN Length = 403 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 104/373 (27%), Positives = 168/373 (45%), Gaps = 13/373 (3%) Query: 5 AKTIIAGMIALAISHT----AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 A + G A A + + G +SG Q G +NG A+ N G Sbjct: 26 AGLAMVGAALTACGGGDSNEAGTKEFLIGFQGPLSGENQQLGINAYNGVLTAVDLANRTG 85 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILM 119 G+ L V DD P+Q A K++++ + V+G + S+ T+ + +Y G+L Sbjct: 86 GLP-FTLRIVASDDQGVPEQGPTAAQKLIDNPDVVAVVGPVFSAPTKASEPLYSQTGLLS 144 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 +SP AT P LT G+ R D+ QG AA+Y+ + VK +R+ + D+ +YG GL+ Sbjct: 145 VSPSATAPALTDLGFTSFYRVIAPDTVQGAGAAEYLAKVVKAKRVYSLDDRSEYGTGLSG 204 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 +V+ GLK A DGI KD+++ ++ + D VYY GYY + + + RS Sbjct: 205 AVERGLKQAGVAYT-HDGINP-TKDYTSQATKIMADGADAVYYSGYYSDFALLTKALRSK 262 Query: 240 GLKTQFMGPEGVGNASLSNIAGDA-AEGMLVTMPKR-YDQDPANQGIVDALKA-DKKDPS 296 G + +G + AG A AEG L+T P + DPA G V K + Sbjct: 263 GYDGAILSGDGSNDDQYIRQAGAANAEGTLITCPCSDANTDPAATGFVSEYKKVNSGLKP 322 Query: 297 GPYVWITYAAVQSLATALERTGS-DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFG 355 G Y Y A ++ + L + G+ +++ D + V + ++ GD++G Sbjct: 323 GTYSGEAYDATNAIISVLRKLGTGASRESVLADFGSVDFPGVTKRIRFERNGDVQGSTVY 382 Query: 356 VFQWHADGSSTAA 368 V+Q DG Sbjct: 383 VYQVK-DGQRVVL 394 >UniRef50_C7RP21 Extracellular ligand-binding receptor n=2 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RP21_9PROT Length = 380 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 65/373 (17%), Positives = 132/373 (35%), Gaps = 11/373 (2%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R + + +A + ++ + + VG+ SG A G + + A++ N GG+ Sbjct: 13 RLRAAAVVALGGMAFAGCVPSEPLTIGFVGSTSGRSADLGIAGRDAVQLAVEQRNQAGGV 72 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G ++ + DD +P+ A V ++++ G ++G + S+ I +L++SP Sbjct: 73 GGRQVRLLLRDDEQNPEVARRVLRELIDQGAVAIVGPMTSAMAMAVVPIANQARVLLVSP 132 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD--KQQYGEGLARS 180 + ELT H R A+++LE +R+ ++D + + E Sbjct: 133 TVSTDELTALD-DHFFRVNTATLDNAGRVAQFLLEQQGTRRLVAVYDTGNRSFTESWLAG 191 Query: 181 VQDGLKAANANVVFFDGITA-GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 Q + +V G + GE F + + + + + +Q R + Sbjct: 192 FQAAYQQGGGELVQRIGFASGGETAFLTIAREALATPAEGILILANATDTALLSQQIRKL 251 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQ-DPANQGIVDALKADKKDPSGP 298 + + L + G A EG+ + + P Q Sbjct: 252 DSRLPITASGWAASDRLIEVGGKAVEGLTLVQDFDRNSGAPRYQEFRRLYGERFHREPDA 311 Query: 299 YVWITYAAVQSLATALERTGSDEP-LALVKDLKAN-GANTVIGPLNWDEKGDLKGFDFGV 356 + A + AL G EP + + + A + P+ +D GD++ F Sbjct: 312 AAVNAFDAGNVILDAL--AGRREPQQGVKEAILAVRQFEGLQEPIGFDTFGDVRRKLFV- 368 Query: 357 FQWHADGSSTAAK 369 DG + Sbjct: 369 -TVVRDGRFALVR 380 >UniRef50_B1Y595 Extracellular ligand-binding receptor n=10 Tax=Proteobacteria RepID=B1Y595_LEPCP Length = 380 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 91/353 (25%), Positives = 149/353 (42%), Gaps = 11/353 (3%) Query: 22 MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQA 81 + I++A V +SG A G +G A+K+INA GGI G K+V D P A Sbjct: 24 AQEVIRIANVVELSGSGASPGTYFRDGVELAVKEINAAGGILGRKIVTTTADTQTQPGIA 83 Query: 82 VAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTA 141 +A K V+DG V G + S S + + + G +TQ+G ++ RTA Sbjct: 84 KGLAAKAVDDGAFAVFGPVYSGSIMVSMAETRRAEVPNFT-GGEAAAITQQGNPYVFRTA 142 Query: 142 GLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAG 201 SS P A+YI K + + +I+ +G+G ++ L +V G Sbjct: 143 FGQSSSFPKLARYI--NTKARTLVVIYQNNDFGKGGRDTLTKLLDGGPTRIVGEMATDQG 200 Query: 202 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAG 261 + DFSA + + ++ N D V+ E + L++ R G +G + + + +AG Sbjct: 201 QIDFSAAVIKARQANADAVFVYLTEEESARALKELRKQGWSKPIIGETVLVSQKVIELAG 260 Query: 262 DAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 +AA G+ + D +P K +Y V +L A+E+ G Sbjct: 261 EAANGVTGHVGLTVDAPNPEMLKFKAKFYQAYKYIPDHNGIKSYMGVYTLKAAIEKAGKL 320 Query: 321 EPLALVKDLKAN-----GANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 + +A+ K +K VI +++D+KGDL F V DG Sbjct: 321 DRVAVAKAMKGLEVKAAKYPGVIMDVSFDDKGDLDRESFLVE--VKDGRQVVV 371 >UniRef50_A6E2V4 Twin-arginine translocation pathway signal n=2 Tax=Roseovarius RepID=A6E2V4_9RHOB Length = 391 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 78/364 (21%), Positives = 137/364 (37%), Gaps = 13/364 (3%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MKR + A +A + A A DIKV ++ SG A G+ G A++ G Sbjct: 1 MKR--AFLAALGLATGFAMPATAQDIKVGLLLPFSGVYAALGNDIEVGFTTALEQF---G 55 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 V D P A+A A K++ D + + G + S D+ G+ + Sbjct: 56 SETAATFEIVREDTEVKPPVALAKAKKLILQDKVDVISGIVSSGVLGAVRDMVHGAGVPL 115 Query: 120 ISPGATNPELT-QRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 I A N E T + +I R + + +++ + +++ + G + Sbjct: 116 IVANAGNDEATGEACSPYITRMSFSNGQVNRPMGQWMYDQ-GIRKVYTLAPDYAAGRQMI 174 Query: 179 RSVQDGLKAANANVVFFDGIT-AGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 AA +V D +DF +A+ K + V+ E ++Q Sbjct: 175 DGFVQTFTAAGGEIVGQDFTPFQKTQDFGPYMAQAKSSGAEAVFVFYAGGEAISFVKQYD 234 Query: 238 SVGLKT--QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKD 294 S GLK G + ++ N G AAEG++ + D PAN V+A A Sbjct: 235 SFGLKAELPLYGSGFLTSSLYVNAQGPAAEGVITALHYVPTIDSPANAQFVEAFTAKTGR 294 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDF 354 + Y A ++L A+ + G+ + +L L+ + G L+ D + Sbjct: 295 VPSEFAVHGYDAGRALIEAV-KAGATDRESLANALRQVRFDGPRGALSIDPATNNIVQPI 353 Query: 355 GVFQ 358 V++ Sbjct: 354 YVYE 357 >UniRef50_Q137Z6 Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q137Z6_RHOPS Length = 383 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 73/363 (20%), Positives = 136/363 (37%), Gaps = 10/363 (2%) Query: 2 KRNAKTIIAGMIALAISHTAMAD---DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINA 58 ++ + + L+ A A I + ++GP++ G N A +DIN Sbjct: 5 RKEFLSSMVAATVLSFVGAANAQQTGPILIGATVPITGPLSLTGKQYQNSLAMAEEDINK 64 Query: 59 KGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGI 117 GGI G ++ V D AV K+ + + S+ + + G+ Sbjct: 65 AGGINGRQIKVVFEDTQASNGTAVNAFVKLAQETKPAFFFLSSYSTQNLAVAPELKKIGV 124 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGL 177 + G + G + + R DS + ++ +K ++ I++ + +G+G Sbjct: 125 PAMYAGG-ADAVADGGNEWMFRIRPADSVSAAGMVRAAVDVIKAKKPGILYIQNDFGQGG 183 Query: 178 ARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 A++ +AA VV + +KDFSA + L+ + D + Y + +LRQA+ Sbjct: 184 AQTAAKRFEAAGIPVVGMEAYGQNDKDFSAQLLSLRSKGADTILIFNYPQDGALVLRQAK 243 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDA-AEGMLVTMPKRYDQD--PANQGIVDALKADKKD 294 +G K + + + A EG+ + D + V+ KA Sbjct: 244 LLGFKMPLVTSSAALVPAAMQLLSPADLEGVWGVVDTFMDATAGDRMKDYVERFKAKFGI 303 Query: 295 PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLKGFD 353 PY Y +A + + G +P AL + L A V ++D KG+ Sbjct: 304 DPDPYGLAYYDGAFLMADGMRKVG-TDPKALREWLAAVKDWQGVGHVYSYDAKGNGVRDL 362 Query: 354 FGV 356 V Sbjct: 363 AVV 365 >UniRef50_Q140M5 ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q140M5_BURXL Length = 425 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 69/352 (19%), Positives = 138/352 (39%), Gaps = 12/352 (3%) Query: 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA 83 D IK+ G SG ++ G +G + + IN +GG+ G KL + DD +P +++A Sbjct: 68 DPIKIGFTGPASGGMSLLGQGVRDGIQVYVDYINDQGGVNGRKLELIAEDDGYEPMRSLA 127 Query: 84 VANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142 K+ D + ++ + ++ + +I+P A + +LT +++ + Sbjct: 128 GVKKLAEQDNVVAIVSPTGTPGVTAMLPYAQERKLPIIAPYAFSHKLTTPTQRYVFTSLP 187 Query: 143 LDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE 202 Q Y+++T+K +IA I+ +G+ + +K N G Sbjct: 188 EVRLQADVLGTYLVKTLKHTKIAAIYQNDDFGQDAVAGFEARMKKDNVPFT-KLPFDRGT 246 Query: 203 KDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGD 262 +FS ++++ ++ + V + G + ++R+A +G K QF G +G+ +AG Sbjct: 247 SNFSGVVSQARQSGAEDVVFFGIPRDGALIMREANKMGWKPQFSGHSALGDPQTFTLAGA 306 Query: 263 A-AEGML--VTMPKRYDQDPANQGIVDALKADK--KDPSGPYVWITYAAVQSLATALERT 317 A G + M + PA + + K P Y Y A + AL+ Sbjct: 307 ALVNGAIAVAVMEPLDSKKPAVLDFIAR-QKKYLPKTPPTTYSMHGYNAAEIFVEALKHV 365 Query: 318 -GSDEPLALVKDLKANG--ANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 G +V L+ ++ P+ + + DG Sbjct: 366 QGEPTGDKIVAALEQMNNFNTGLMSPITFTATQHAGSNAVAFMR-AEDGKWV 416 >UniRef50_A8F651 Extracellular ligand-binding receptor n=2 Tax=Thermotogaceae RepID=A8F651_THELT Length = 387 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 71/381 (18%), Positives = 135/381 (35%), Gaps = 15/381 (3%) Query: 1 MKRNAKTIIAGMIALAISHTA-MADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 MK+ + A + L ++ +D I V A+SG A G G + +N Sbjct: 1 MKKFLTLLAALVCVLVLAEVGVYSDKIVVGSFQALSGSYAIIGQEMSKGMKAYFNWVNKN 60 Query: 60 GGIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGIL 118 G+ G K+ + DD +P + V ++V D + ++G L + D E + Sbjct: 61 SGVYGRKIELIIADDQLNPSKTVVEVKRLVESDKVFAIVGGLGTYGCLAVMDYLEQNKVP 120 Query: 119 MISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLA 178 + GA L ++I + +G AK++++ + ++IAI++ G+ Sbjct: 121 FVYQGAGTSLLVMPPKKYIFGVQPDYTLEGQLIAKFLVKELGKKKIAILYMANDIGKEGY 180 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + L++ N V E D+SAL + N + + G + + ++ R Sbjct: 181 AAALSRLQSYNLKPVVEISYNPAETDYSALAVDVLNANPEAIIIYGLITDTIRWIKTLRD 240 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALK-------AD 291 G+ + + + S + G EG+ +T P V + Sbjct: 241 YGVTSDIVTIYPNADPSFVTLGGKYVEGIYLT-GWVPLATPDKPEFVRDYERAVAIFQET 299 Query: 292 KKDP-SGPYVWITYAAVQSLATALERTGSD-EPLALVKDLKANG-ANTVIGP-LNWDEKG 347 Y + A + L R GSD LVK L++ N ++ + W Sbjct: 300 YPKEIPSSYAVAGFIAAEVFVQGLLRAGSDLTREGLVKALESFDHWNGILAKDITWGPNL 359 Query: 348 DLKGFDFGVFQWHADGSSTAA 368 + +G Sbjct: 360 RRGKSSMYFIKI-ENGVFVPV 379 >UniRef50_C5ET85 Extracellular ligand-binding receptor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET85_9FIRM Length = 399 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 84/354 (23%), Positives = 156/354 (44%), Gaps = 8/354 (2%) Query: 16 AISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG-DKLVGVEYDD 74 A TA + IKV V ++GP+A G A ++INA GG+ G L V DD Sbjct: 39 AAQSTATGEPIKVGVSNMVTGPMAAGGIRMKQAITMAFEEINANGGVLGGRPLEMVLVDD 98 Query: 75 ACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGY 134 P AV NKI+ + + IG S ++Y G+ I+ AT+P+L + Sbjct: 99 TGTPTGAVNAVNKILGENVSVSIGPHTSPMASATQELYRKAGVPFIT-AATSPKLLEAEN 157 Query: 135 QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF 194 + R + D + GP ++ + ++I ++D YG + + + Sbjct: 158 PYFFRISVSDGAVGPAMVEFAKDKFGAKKIGALYDTDDYGVAADGATKQYCADNGIEY-Y 216 Query: 195 FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL-KTQFMGPEGVGN 253 +G T+G+KD ++ ++++K D V+ + E ++RQ +G+ +GP + Sbjct: 217 SEGFTSGDKDLTSQLSKIKGWGPDVVFDFSHDAEAALIVRQLDELGMGDIPHVGPNALAQ 276 Query: 254 ASLSNIA-GDAAEGMLVTM-PKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLA 311 + ++ EG + + + A + +DA A + Y + Y A A Sbjct: 277 SQTYDLCDAKQLEGTYASTDFYADESNAAMKKFLDAFHARWGEDVERYAAMYYTAAYLAA 336 Query: 312 TALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGS 364 A++R GSD+P + K L + + V G LN + +G++ + + ++ D + Sbjct: 337 DAIDRAGSDKPEDIRKALSETKDFDAVFGKLNCNAQGEM-NTNLYILEFDGDKN 389 >UniRef50_A0LTU4 Extracellular ligand-binding receptor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTU4_ACIC1 Length = 393 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 82/391 (20%), Positives = 149/391 (38%), Gaps = 25/391 (6%) Query: 1 MKRNAKTIIAGMIALAISHTAMAD-----------DIKVAVVGAMSGPIAQWGDMEFNGA 49 MKR + + + +A + K+ G +SG AQ G Sbjct: 1 MKRRFAAAVIPLTVAGLVVSACSSGKSSGGSGGKPVFKIGYEGPLSGGNAQLGLNMKYAV 60 Query: 50 RQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDG-IKYVIGHLCSSSTQPA 108 + AI + NAKG + L E DD ++ A A ++++D + V+G S +T+ A Sbjct: 61 QLAINEANAKGDLPFV-LQYTEADDQGSGDKSPAAAQQLIDDKQVMAVVGPAFSGATKAA 119 Query: 109 SDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIH 168 + D + +SP AT+P L G++ R D++QGP A Y + + + I I Sbjct: 120 EPKFADADLATVSPSATSPALATFGWKTFFRIVADDNAQGPADADYAVNKLGIKNIFAID 179 Query: 169 DKQQYGEGLARSVQDGLKAANANVVFF--------DGITAGEKDFSALIARLKKENIDFV 220 D YG+ L ++ ++ K A V + + + A+ +K + V Sbjct: 180 DASAYGQPLEQAFENQAKKDGAQVTHQSVPGTTQCQAGSGNTQQYPAVATTIKNSGAELV 239 Query: 221 YYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA-AEGMLVTMPKRY-DQD 278 +Y GYY + + + R G + + + AG + AEG ++ + Sbjct: 240 FYAGYYCDFALLAKALRQAGYTGKLFSDDASLDPKYIEQAGASVAEGTYISCACADITTN 299 Query: 279 PANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTG-SDEPLALVKDLKANGANTV 337 P Q V K Y Y A + + L+ G +V L+ + Sbjct: 300 PKAQSFVTNFKKLAGFDVSVYSAEAYDATNVIISVLKELGPKATRAQVVDKLRTVDYQGI 359 Query: 338 IGPLNWDEKGDLKGFDFGVFQWHADGSSTAA 368 + + G++ G ++Q +G + Sbjct: 360 TKEVKFQSNGNIAGSAVYIYQVQ-NGKIVSL 389 >UniRef50_B1LX36 Extracellular ligand-binding receptor n=11 Tax=Alphaproteobacteria RepID=B1LX36_METRJ Length = 378 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 119/366 (32%), Positives = 181/366 (49%), Gaps = 3/366 (0%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R A ++ +AL + A AD + + V SGP G+ G A +D NA GG+ Sbjct: 14 RPALIALSLCLALLPASRAAADVV-IGVAVPRSGPYVAVGEQVLRGVEAAARDANAMGGL 72 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G + DDACD A+AVAN V ++ V+GH+CS+++ ASDIY G++MI+ Sbjct: 73 DGQPVTLDVQDDACDSNTAMAVANHFVRSNVRLVVGHVCSNASIAASDIYAQNGVVMITA 132 Query: 123 GATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQ 182 + LT RG +I R G D Q +A + E + ++IA+I D+ LA + + Sbjct: 133 ASVAARLTDRGLPNIFRVCGRDDDQARLSAAVLAERFRDRKIALIQDQTPAARSLAAATK 192 Query: 183 DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242 D L N F + + D +AL RLK I+ VYYGG EMG++++ A G + Sbjct: 193 DNLNRIGVNEALFLSFSPSDADDAALADRLKSAGIEVVYYGGDAAEMGRLVKIAADRGFR 252 Query: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWI 302 Q+ G + + IAG A+ G+L+T + PA +V A KA+ Sbjct: 253 PQWFGTSAIATPDFAKIAGSASNGVLMTFYLDPSRQPAAAAVVKAFKAE-GVDPTGSTIY 311 Query: 303 TYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 YAA+Q+L A S EP + + L + V+G + +D KGD+ + ++ W D Sbjct: 312 GYAAMQALVAAGNFAHSTEPRPIAQALHTERFDLVLGTVGFDAKGDVTAQGYVLYVWK-D 370 Query: 363 GSSTAA 368 GS T A Sbjct: 371 GSFTPA 376 >UniRef50_A6WC82 Extracellular ligand-binding receptor n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WC82_KINRD Length = 391 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 167/349 (47%), Gaps = 11/349 (3%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 D+ + GA++GP A G E NG + A+ NA+ G ++ YD D QA + Sbjct: 45 DVSIGFFGALTGPNANLGVNEQNGVKLAVDQHNAESGA--CQVTVTPYDSQGDQNQAQGL 102 Query: 85 ANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL 143 A ++V ++ + ++G S ++ A I+++ GI+ ISP ATNP L + G++ R G Sbjct: 103 AQQVVGDENVLGIVGPAFSGESKVADPIFDEAGIVGISPSATNPALAENGWKTFFRVLGN 162 Query: 144 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK 203 D+SQGP AA YI +T+ Q++ +I D +YG+GLA V++ L A V + I G+ Sbjct: 163 DASQGPAAATYISDTLGKQKVYVIDDATEYGKGLADIVRESL---GAKAVKNNTIQTGQT 219 Query: 204 DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL---KTQFMGPEGVGNASLSNIA 260 DFSA++A ++ D V++GGYYPE G +L+Q R GL K F+ +G + L A Sbjct: 220 DFSAVVADVQASGADAVFFGGYYPEGGLLLKQLRESGLSADKLAFITDDGAKDEGLITAA 279 Query: 261 GDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSD 320 G AA + D A V Y + A L + G+ Sbjct: 280 GAAAAEGALMTCPCLPPDKAGGTFVADYTEAYGTAPATYSAEAFDAANILLDGIAE-GNV 338 Query: 321 EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK 369 L+ +K+ V L +DEKG+ ++ G A + Sbjct: 339 TREDLLAYVKSYDKPGVTKQLKFDEKGEPSEVSVWAYKV-EGGEIVADQ 386 >UniRef50_A4U5N4 ABC transporter substrate binding protein n=2 Tax=Bacteria RepID=A4U5N4_9PROT Length = 390 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 80/366 (21%), Positives = 141/366 (38%), Gaps = 14/366 (3%) Query: 4 NAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIK 63 ++ I+AG +A++ A ++K+ ++ +SGP + G + A+K N G + Sbjct: 5 SSTLILAGFLAVSTPAWATPGEVKIGMLTTLSGPGSSLGIDVRDAFNLAVK--NLGGSLG 62 Query: 64 GDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G K +E DD P A A +++ D + + G + S+ ++ IS Sbjct: 63 GLKATIIEVDDQQKPDVAKDAATRLIEKDKVDFATGIIFSNLMLATMPSFDRAQTYYISA 122 Query: 123 GATNPELTQR-GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 A+ +L + + A + +Q Y ++ + + ++ G+ Sbjct: 123 NASPSQLAGKQCTPYFFSAAYQNDNQHEAMGHY-VQAKGFKNVYLMAPNYPAGKDGLNGF 181 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGL 241 + NV T + D++A +A LK N D VY ++Q GL Sbjct: 182 KRYYA---GNVAGEVYTTVNQLDYAAELASLKAANPDAVYVFYPGGMGVNFVKQWEQAGL 238 Query: 242 KT--QFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGP 298 K GP + GDAA G L T D +P N+ V +A Sbjct: 239 KGKIPLFGPGFTFSEDTLAAMGDAALGTLNTAQWSPDLDNPQNKKFVADFEAAFGRLPSV 298 Query: 299 YVWITYAAVQSLATALERTGS--DEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGV 356 Y Y A + +A+ +TG D+ AL K L A +V G +++ DF + Sbjct: 299 YASQAYDAAMLIDSAIRKTGGKLDDKAALGKALMAADFKSVRGNFKFNKNHFPI-QDFFL 357 Query: 357 FQWHAD 362 + D Sbjct: 358 REVVKD 363 >UniRef50_Q7M8R4 ABC TRANSPORT SYSTEM PERIPLASMIC BINDING PROTEIN n=2 Tax=Helicobacteraceae RepID=Q7M8R4_WOLSU Length = 372 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 151/365 (41%), Gaps = 19/365 (5%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 MK K + +A A ++K+ VV +SG I +G G IN Sbjct: 1 MKGMFKLALISAVAAGSLVAA---EVKIGVVLPLSGAIGGYGQSANKGITL----INELK 53 Query: 61 --GIKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGI 117 GD + V D+ D ++ K+V+ D + VIG L S++T + I +D Sbjct: 54 PTLANGDTIKLVVVDNKSDKIESANAMQKLVSSDKVDAVIGALTSTNTLAMTKIADDTKT 113 Query: 118 LMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDK-QQYGEG 176 +I+P ATN +T +G ++ R DS QG A +K ++ A++ D Y G Sbjct: 114 PLIAPVATNDRVT-KGRNYVSRVCFSDSFQGVIGANLAYNDLKAKKAAVLFDSGSDYSIG 172 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 L ++ + + + AG KDF A I+ +K + +D VY Y E + Q+ Sbjct: 173 LTKAFKQQFTKLGGKIEIEAQVPAGTKDFKAQISSVKAKGVDVVYIPIYSNEAALIAIQS 232 Query: 237 RSVGLKTQFMGPEGVGNAS-LSNIAGDAAEGMLVTMPKRYD--QDPANQGIVDALKADKK 293 + +GL F+G +G+ + +A EG + T D Q P + A Sbjct: 233 KQLGLNVPFIGGDGIAADKVFFEVGKEAIEGYMATDYYSPDAKQTPKGAEFMAAYAKKYN 292 Query: 294 DP-SGPYVWITYAAVQSLATALER-TGSDEPLALVKDLKAN-GANTVIGPLNWDEKGDLK 350 + + + A + +A+E+ T + + ++++A + G ++ E GD Sbjct: 293 NEKVHTFAAMIADAYGIITSAMEKCTNPKDKECVNQNIRATKNFEGITGTISL-ENGDAV 351 Query: 351 GFDFG 355 Sbjct: 352 RSAVI 356 >UniRef50_C9NK09 Extracellular ligand-binding receptor n=3 Tax=Streptomyces RepID=C9NK09_9ACTO Length = 411 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 91/359 (25%), Positives = 149/359 (41%), Gaps = 21/359 (5%) Query: 25 DIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 84 + + V ++G ++ G N A K N + G + DD P A Sbjct: 41 TVVIGVDAPLTGSLSALGQGIKNSVDLAAKTANKNNEVPGIEFKIEALDDQAVPASGQAN 100 Query: 85 ANKIVNDG-IKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQ----------RG 133 A K+V + + +G L S Q ++E + +SP TNP L+Q R Sbjct: 101 ATKLVGNKDVLGAVGPLNSGVAQSMQGVFEKADMAQVSPANTNPALSQGDNWGKGDSKRV 160 Query: 134 YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVV 193 ++ RT D QG AA+Y+ K +++ ++ DKQ YG GLA VV Sbjct: 161 FKTYFRTCATDVVQGKFAAQYLFNDAKKKKVYVVDDKQTYGAGLAAIFSAEFTRLGGKVV 220 Query: 194 FFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGN 253 D +T E DFS+ ++K D VYYGG YPE G + Q + G K MG +G+ + Sbjct: 221 GTDHVTVKETDFSSTADKVKSSGADSVYYGGQYPEGGLLSDQIKKTGAKIPTMGGDGIYD 280 Query: 254 ASLSNIAGDAAEGMLVTM-PKRYDQDPANQGIVDALKA-DKKDPSGPYVWITYAAVQSLA 311 + + +G+A +G T + P + + A KDP Y +Y A ++ Sbjct: 281 PAFISASGEANDGDFATSVGYPVEALPTAKQFISDYNAGGYKDPFAAYGGYSYDAGWAII 340 Query: 312 TALERTGSDE--------PLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHAD 362 A++ +D + + + + V G +++DE GD V++ Sbjct: 341 QAVKAVVADNDGKLPEDARAKVTEAMAKVSFDGVTGKVSFDEFGDTTNKQLTVYEVQKG 399 >UniRef50_UPI0001B5404D ABC transporter ligand-binding protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5404D Length = 391 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 100/349 (28%), Positives = 155/349 (44%), Gaps = 10/349 (2%) Query: 19 HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDP 78 A +A G ++G A G GA+ A+ N G ++ E+D P Sbjct: 46 GKAQCAPTSIAYAGTINGANAALGQNILKGAKLAVDQHNKAN--PGCQVKLAEFDTEGTP 103 Query: 79 KQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHI 137 +A + +IVN GI VIG S ++ A +I+ G++ ++P ATNP L Q G++ Sbjct: 104 DKAPGIVTQIVNTPGIIGVIGLPFSGESKAAGNIFNSAGLVAVTPSATNPSLAQNGWKTF 163 Query: 138 MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDG 197 R G D++QGP AAK+I +K ++ +I D +YG GLA S +KA D Sbjct: 164 FRALGNDNAQGPAAAKFITGELKANKVCVIEDDSEYGTGLAAS---TIKALGDKASCQDK 220 Query: 198 ITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 257 + + DFSA++ ++K E D ++Y GYY E +Q G+K +F+GP+GV + Sbjct: 221 VKTKQTDFSAVVNKIKGEKPDAIFYSGYYQEAAPFAQQLNDAGVKAKFVGPDGVKDDLFV 280 Query: 258 NIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERT 317 AGDAA T P DA KA G Y Y L ++ Sbjct: 281 KGAGDAAANAYFTCPCVPAD--QFTKFTDAYKAATGVDPGTYSPEAYDVATILLKGID-A 337 Query: 318 GSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 G + L+ +K + WD+ G+L ++ +G Sbjct: 338 GKKDRAGLLDFVKTYDGQGITKHFKWDDHGELSATTVWTYKV-ENGKIV 385 >UniRef50_A7IFS3 Extracellular ligand-binding receptor n=3 Tax=Proteobacteria RepID=A7IFS3_XANP2 Length = 408 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 80/367 (21%), Positives = 142/367 (38%), Gaps = 22/367 (5%) Query: 17 ISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDAC 76 A +K + SG +A GD F G A+++ NA GGI G K+ ++ D A Sbjct: 21 AGPAAAQGTVKFGALYPFSGGLALLGDESFRGFELAVEERNAAGGIDGKKIEFIKGD-AV 79 Query: 77 DPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQ 135 DP QAV A ++ + D + + G SS + A+ + E G+ GA + +T+RG++ Sbjct: 80 DPNQAVGEARRLTSVDKVSAIFGTYSSSLSLAATQVTELAGVPYFELGAVSDPITERGFK 139 Query: 136 HIMRTAGLDSSQGPTAAKYILET----VKPQ----RIAIIHDKQQYGEGLARSVQDGLKA 187 ++ RT ++E + + ++ IIH+ YG+ ++ + K Sbjct: 140 YVFRTNATARDFANRMVDSVIEAVAPALGVKAADLKVGIIHEDSLYGQTVSGYQKTRAKE 199 Query: 188 ANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQ-FM 246 NVV +A D + +I RLK +D V Y + RQ + K + M Sbjct: 200 KGLNVVEVLPYSAKSVDLTPVILRLKSAGVDVVLQTSYQNDTVLFFRQMKDQAYKPKAVM 259 Query: 247 GPEGVGN--ASLSNIAGDAAEGMLVTMPKRYDQDPAN----QGIVDALKADKKDPS-GPY 299 G G + +++ + + EG L +++ +P V KA + Sbjct: 260 GAGGGYSTRDTMTAVGAENMEGALDVDFTQFNTNPKATPGLAEFVTKYKAKYGIDPRSGH 319 Query: 300 VWITYAAVQSLATALERTGSDEPLALVKDLKANGA---NTVIGP-LNWDEKGDLKGFDFG 355 Y + A+ S + + + T G + E+G Sbjct: 320 SLANYMGAKVFFDAIASAKSTDADKVRAAVLKVDIPVGETATGWGAKFSEQGQNTRAQPF 379 Query: 356 VFQWHAD 362 + QW Sbjct: 380 LMQWQGG 386 >UniRef50_B7KWM3 Extracellular ligand-binding receptor n=9 Tax=Proteobacteria RepID=B7KWM3_METC4 Length = 396 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 76/382 (19%), Positives = 143/382 (37%), Gaps = 16/382 (4%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R +I A+ +K+ +V A+SG A+ G+ G AI++IN GG+ Sbjct: 13 RRFVLGALLAGVTSIGAVRAAEPVKIGLVTALSGQSAKSGEAISRGIGLAIEEINRNGGV 72 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYEDEGILMIS 121 G L V DD +P + V A +++ G+ +IG L + + I + + Sbjct: 73 LGRPLELVARDDEANPSKGVLAARELIQRAGVVALIGGLDTPVSMAIVPIANQMKVPFVG 132 Query: 122 PGATNPELTQRG--YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 P A +T+ G ++ R + +D+ Y ++T ++ I +GE + Sbjct: 133 PWAAGTGITRNGAVDNYVFRVSAVDALVDEALVAYAVKTYGAKKPGAILVNNAWGESNQQ 192 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + LKAA + A + D ++RL++ D ++ G Q+++ + Sbjct: 193 GLVSALKAAGLPSAGIEKYEANDIDMVPQLSRLREAGADALFLVGNVGPSAQVVKSLDRM 252 Query: 240 GLKTQFMGPEGVGNASLSNIAGDAAEGMLV--TMPKRYDQDPANQGIVDALKADKKD--- 294 G + G +AG A + T + P + ++DALKA Sbjct: 253 GWTVPVISHWGPAGGRFDELAGPGAARVHFVQTFTFAGNDSPKAKAVLDALKAKYPAIKS 312 Query: 295 ----PSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLN--WDE-K 346 + Y A +A A++ G+ E + + +I + + Sbjct: 313 MADVTPAVGIANAYDATHLIALAIQAAGATEGPKVRDGFYKVAPYSGLIKTYEAPFAPGQ 372 Query: 347 GDLKGFDFGVFQWHADGSSTAA 368 D D +F +G A Sbjct: 373 HDALKPDDYIFASFKNGEIVAV 394 >UniRef50_A1WRT6 Extracellular ligand-binding receptor n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT6_VEREI Length = 384 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 84/340 (24%), Positives = 150/340 (44%), Gaps = 6/340 (1%) Query: 3 RNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGI 62 R A ++AG+I++A + A + IK+ ++ G + + GA+ A K++NA GG+ Sbjct: 8 RLASLLMAGLISVA-AMPAASQPIKLGIITDRVGAAKPYAEPVLQGAQVAAKELNASGGV 66 Query: 63 KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 122 G + + DD P + A K+V+ G+ +++ +S+TQ A + + G ++P Sbjct: 67 LGRPIELLVEDDQGRPDLSATAARKLVDSGVAFILSISWTSATQQAQSVTVETGTPHLAP 126 Query: 123 GATNPELTQR-GYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSV 181 + LT + + +T L SSQ T Y +R+AII D G+ + +S Sbjct: 127 SNSGDTLTTQIANPNFWQTGPLASSQVSTLLAYARSKS-FKRVAIIGDNTGLGQLMTQSF 185 Query: 182 QDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGY-YPEMGQMLRQARSVG 240 + G++AA VV + + G A I R++ N D ++ G PE +LR R +G Sbjct: 186 KAGIEAAKIQVVSEEVVPRGANSADAQIQRVRASNPDAIFLTGILAPENTLILRAYRLLG 245 Query: 241 LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV 300 LK +G N +++A +G++ + P Q + Sbjct: 246 LKAPLLGNFSFSNIQYASVAKGLLDGLVFIDAFDPTK-PQVQRFIATYTKAAGTAPDNIN 304 Query: 301 WITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIG 339 Y V +A A+ R G + L + + G V+G Sbjct: 305 AYGYDGVMLVADAIRRAGGTDKLKVRDAMQATKGFVGVLG 344 >UniRef50_A0LKL5 Extracellular ligand-binding receptor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKL5_SYNFM Length = 417 Score = 269 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 86/374 (22%), Positives = 145/374 (38%), Gaps = 16/374 (4%) Query: 2 KRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGG 61 K + + LA D +KV VVG +G A G G + A +NAKGG Sbjct: 28 KSLWILALIVGLVLAGGPVWAQDTVKVGVVGPRTGTAAATGKAFEEGIKLATDYVNAKGG 87 Query: 62 IKGDKLVGVEYDDACDPKQAVAVANKIVN-DGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 + G KL V D A P +A + ++V D + V+G SSS ++ E + I Sbjct: 88 VLGKKLEIVFEDTAGAPDKAASGFERLVTRDKVALVLGESHSSSALAEIEVAERFKVPFI 147 Query: 121 SPGATNPELTQRGYQHIMRTAGLDS-SQGPTAAKYILETVKPQRIAIIHDKQQYGEGLAR 179 A +T + Y+++ R ++ + AK+++ K ++ I+ + +G G+A Sbjct: 148 VVEAWADPITAKNYRYVFRAGPSNTGVVNESIAKWVVSE-KFKKAYIVAENTDWGLGIAE 206 Query: 180 SVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSV 239 + L AN +D + ++K + D V Y + + QA V Sbjct: 207 LSKAALTKANIPF-EMLVTERQSQDHYTELNKIKAFDPDVVLAYIYGTGLHYFVAQAGEV 265 Query: 240 GLKTQFMGPEGVGNASL----SNIAGD--AAEGMLVTMPKRYDQDPANQGIVDALKADKK 293 L + + +G G SL GD E + +M ++ + A Sbjct: 266 KLTPKAIVLDGAGPPSLWPDYWKNVGDYGDLECFVSSMHEKVELTKLATEFRQAYVKAFG 325 Query: 294 DPSGPYVWIT-YAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWD-EKGDLKG 351 P Y + Y ++ A A+ R S +P LV+ L+ G + + EKG Sbjct: 326 GPPTDYKSRSIYDSILIAADAINRAKSTDPEKLVEALEKTSLEVTRGTVKFGLEKGGTTY 385 Query: 352 ----FDFGVFQWHA 361 + QW A Sbjct: 386 HQWEPPMLIVQWQA 399 >UniRef50_Q74AG6 ABC transporter, periplasmic substrate-binding protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74AG6_GEOSL Length = 382 Score = 269 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 68/361 (18%), Positives = 132/361 (36%), Gaps = 8/361 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 ++ A A ++ +S D +K+ +G +SG + G +G A+++IN G Sbjct: 12 LRPVALLACAAVMVSTMSGCRRDDSLKIGYLGTLSGRHSDLGVAGRDGTIFAVEEINRAG 71 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI 120 GI G +L V DD A +++ G+ ++G + SS + ++MI Sbjct: 72 GINGKRLELVIRDDEGKAGSAQTAVRELIAAGVAAIVGPMTSSMAMATVPVINGSPVVMI 131 Query: 121 SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD--KQQYGEGLA 178 SP + +L+ + + +R ++ + A+Y ++ R+A+++D + Y + Sbjct: 132 SPTVSTGDLSGKD-DNFLRIYPTNAQKTRQLAEYARTSLGLSRLAVVYDLSNRSYTDDWR 190 Query: 179 RSVQDGLKAANANVVFFDGITA-GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQAR 237 ++ ++ V A G+ D+ ++ L + V + + +Q R Sbjct: 191 QAFTRQFESLGGTVAPAVSFDASGQTDYLSVARTLLAKKPQGVLILAGAVDAAMLCQQIR 250 Query: 238 SVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQD-PANQGIVDALKADKKDPS 296 + T E L G A EG++ D D A + Sbjct: 251 KLDTSTALFATEWSSTPELLMHGGTAVEGIVYCQNFIRDDDSTPYVTFCRAFETRFGQLP 310 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGFDFG 355 Y AV+ L + P L + G + G D GD F Sbjct: 311 DFGAVYAYQAVKVTGAGL--AKNPAPRGLKGAILGTGTFPGLQGEFTIDRFGDTDRKPFL 368 Query: 356 V 356 + Sbjct: 369 M 369 >UniRef50_D1SZL8 Extracellular ligand-binding receptor n=2 Tax=Comamonadaceae RepID=D1SZL8_9BURK Length = 387 Score = 269 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 83/370 (22%), Positives = 146/370 (39%), Gaps = 13/370 (3%) Query: 3 RNAKTIIAGMIALAISHTAMA---DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAK 59 R A M A+S + D +K+ V +SGP+A G NG + A+ ++N Sbjct: 10 RRAALAGLAMACAALSLAGCSRVPDTVKIGVAQPLSGPLAALGQDMLNGVKLAVDELNQS 69 Query: 60 GG-IKGDKL--VGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEG 116 G + G ++ V DD D VA ++V G+ V+GHL S + A+ IY +G Sbjct: 70 GFMVDGKRVTLEVVAQDDRADAATGKTVAQQLVESGVVAVVGHLNSGVSIEAAPIYAAKG 129 Query: 117 ILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEG 176 I ++ +T+P T+ G+ R D+ Q + + A++ D YG+G Sbjct: 130 IPQLAI-STHPHFTELGFPGTFRLVANDALQARAMGSFAATQLSASSYAVLDDGTPYGKG 188 Query: 177 LARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQA 236 LA + V + DF AL +L++E +D + ++ ++ Sbjct: 189 LADGAAAQIAQDKRKVSVRESFDDKTTDFKALAGKLQQERVDVIVTTLNDFQVLALIDAL 248 Query: 237 RSVGLK-TQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDP--ANQGIVDALKADKK 293 +G + + + GD + + A + +D K Sbjct: 249 VQANYTRVSILGGDTIKTTDMLK--GDRKLAAIYATSPVLEAREFIAGRQFLDRYDRAFK 306 Query: 294 DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANG-ANTVIGPLNWDEKGDLKGF 352 +Y A L+ A+++ S +P + K L A V G + WD+KG+ + Sbjct: 307 RAPAYGGHYSYDATYVLSAAIQQAKSADPREITKALHAINGYAPVTGTMKWDDKGEQRYG 366 Query: 353 DFGVFQWHAD 362 GV+ A Sbjct: 367 AVGVYGMRAG 376 >UniRef50_C6C245 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C245_DESAD Length = 376 Score = 269 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 75/374 (20%), Positives = 143/374 (38%), Gaps = 8/374 (2%) Query: 1 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG 60 M + +I L A IKV V+ ++G +A +G A + IN+ G Sbjct: 1 MWFRLLGSLLAVILLCTPAFAGEKIIKVGVLYNLTGGMAAIDRPGLHGMELAKEIINSGG 60 Query: 61 GIKGDKLVGVEYDDACDPKQAVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILM 119 GI G KL V D + A + + D + VIG + A+ + I+ Sbjct: 61 GIMGRKLSLVVSDCRSNLDSAAMASEALAGQDDMVAVIGLNDTDYVMAAAPAVTAKDIIF 120 Query: 120 ISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHD-KQQYGEGLA 178 I+ GAT L ++ TA D+ Q AK+ + + D ++ + L+ Sbjct: 121 ITAGATMQNLPYMYGKNFFMTAFGDNMQSRAVAKFAKRRLDTSSCFVGTDISNEFTKTLS 180 Query: 179 RSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARS 238 + + + VV ++G+ + + + ++N D ++ P+ + + + R Sbjct: 181 KYFKRRYRKYGGTVVDEVWYSSGDGKY--PMPKGDEKNPDLIFISSIPPDAPKYITELRK 238 Query: 239 VGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKK-DPS 296 G + +G L ++ + A + D DP Q VD+ + P Sbjct: 239 AGFNQPIVSGDGFDTPGLLDVPQEFAHSIYFATHVALDNPDPQVQEFVDSYERMFGIRPE 298 Query: 297 GPYVWITYAAVQSLATALERTGSDEPLALVKDL-KANGANTVIGPLNWDEKGDLKGFDFG 355 + + Y V LA A+E+ G P + + L K G V G + E + Sbjct: 299 SGFAALGYDTVMLLAQAIEKAGVSTPDEVREALSKTAGFKGVTGEFYYPEGIRVPMKSVD 358 Query: 356 VFQWHADGSSTAAK 369 + ++ +G+ + + Sbjct: 359 IVKYQ-NGTFSFVE 371 >UniRef50_A0LF76 Extracellular ligand-binding receptor n=2 Tax=Deltaproteobacteria RepID=A0LF76_SYNFM Length = 396 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 74/392 (18%), Positives = 134/392 (34%), Gaps = 26/392 (6%) Query: 2 KRNAKTIIAGMIALAIS----HTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDIN 57 + I+A ALA+ AD IK+ A+SGP + G A+ + IN Sbjct: 6 RLRVLFIVATAFALALCPLWTGARAADPIKIGAFFALSGPASSIGTPTKLVAQMVVDKIN 65 Query: 58 AKGGIKGDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLCSSSTQPASDIYED-E 115 +GGI G L V D DP +A+ A +++ +IG + ED Sbjct: 66 KEGGINGTPLELVVGDTESDPTKALMEAKRLIEAGKAAALIGPTRTDEGMAVKAYIEDTA 125 Query: 116 GILMISPGATNPELTQRGY---QHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQ 172 I ++ +P + + + + S +I ++K +IA++ Sbjct: 126 HIPIVMTIGGDPVIAGGKFGPFKWTFKAPQRTSVAARKTYDFI-RSLKLTKIAVLTATDG 184 Query: 173 YGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQM 232 +G+ ++ +V + + D S + ++K V P ++ Sbjct: 185 FGKDGLTWLEQLAPEFGLEIVAKEAFGVTDTDMSPQLLKIKASGAQAVICWTIGPAGARV 244 Query: 233 LRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMP------KRYDQDPANQ---G 283 + + + L + G + +AGDAAEG ++ + D DP Sbjct: 245 AKNVKQLALGIPLVQCHGQPDPKYIELAGDAAEGSIMPSTKLMVVDQLPDSDPQKAVIME 304 Query: 284 IVDALKADKK----DPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKAN-GANTVI 338 + P + + A+ A A+ + G + L ++ G V Sbjct: 305 FIKLYTDVYHFDKQYPINTHSGYAWDAIYLAANAMRKVG-TDAEKLRAAIEQTKGYVGVS 363 Query: 339 GPLNWD-EKGDLKGFDFGVFQWHADGSSTAAK 369 G N E + G D V G K Sbjct: 364 GVFNLTPEDHNGLGTDSLVMVKVEKGKWVLLK 395 >UniRef50_C6C1M4 Extracellular ligand-binding receptor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1M4_DESAD Length = 381 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 76/355 (21%), Positives = 129/355 (36%), Gaps = 14/355 (3%) Query: 20 TAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPK 79 D I++ G + G + G NGA A++DIN GGI G K+ + DD P+ Sbjct: 26 ACSDDPIRLGFSGTLKGKYSDLGVQGRNGALLAVEDINEAGGIDGRKIELIVRDDQNTPE 85 Query: 80 QAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMR 139 AV +++ +G+ +IGH+ SS + A D ++ ISP + P L + R Sbjct: 86 GAVKADKELIAEGVSVIIGHMTSSQSMTAVRDMADSNVVYISPTTSTPLLQGI-KDNFFR 144 Query: 140 TAGLDSSQGPTAAKYILETVKPQRIAIIHDKQ--QYGEGLARSVQDGLKAANANVVFFDG 197 + A+Y ++ + +R+A++ D + + A + V Sbjct: 145 VIPTLTDLSKGLAEYSVDELDKRRLAVVWDNSNPAFTAPYKDVFVEKFAAKGGDFVGAVS 204 Query: 198 ITA--GEKDFSALIARLKKENIDFVYYGGYYPEMGQMLR--QARSVGLKTQFMGPEGVGN 253 + G D+ ++ LK N D V ++ + + Sbjct: 205 VGKHEGSIDWQKVVDELKGMNPDTVVMVTSARDLAGFAQFCTLNKTNWT--ILSSMWGYT 262 Query: 254 ASLSNIAGDAAEGMLVTMPKRYDQDPA-NQGIVDALKADKKDPSGPYVWITYAAVQSLAT 312 L G + EG++ + D D P Y AVQ A Sbjct: 263 KELIQTGGKSVEGIIFVVHFAEDDPEKLYVDFKDRFIKRFGWPPNFAAVFGYQAVQVFAE 322 Query: 313 ALERTGSDEPLALVKDLKANGA-NTVIGPLNWDEKGDLKGFDFGVFQWHADGSST 366 A++R G L + ++++GP DE GD+K V DG Sbjct: 323 AVKRNGGRT-KGLGGAITGISFDDSLVGPFEIDEFGDVKRNGHIV--TVKDGHFV 374 >UniRef50_C1XGY7 Amino acid-binding protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XGY7_MEIRU Length = 411 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 136/354 (38%), Gaps = 11/354 (3%) Query: 21 AMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQ 80 A + I++ VV + SGP A+ G G ++ + + G G ++ ++ D+ DP Sbjct: 46 AQQEPIRIGVVLSYSGPYARLGQEITRGMELYLEKVGYQAG--GRRIQLLKEDEEADPAV 103 Query: 81 AVAVANKIV-NDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELT-QRGYQHIM 138 AV K+V D + + G + SSS D + I ++ A +T +R +I Sbjct: 104 AVRKVRKLVEQDRVNLLSGIILSSSAYGIRDYVHERQIPLVIANAAANGITRERRSPYIF 163 Query: 139 RTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGI 198 RT+ Q ++ V +++ ++ +G+ + ++G A V Sbjct: 164 RTSISAWQQHYPMGPWVARNVG-KKVFLLALDYAFGKEATAAFKEGFLQAGGEPVAELYT 222 Query: 199 TAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK--TQFMGPEGVGNASL 256 G D+SA+I+R+ + V+ + LRQ GL Q V + ++ Sbjct: 223 PLGSTDYSAVISRIAAARPEAVHAVLSGSDAVIFLRQFIQFGLNRSIQLAVSGEVTDENV 282 Query: 257 SNIAGDAAEGMLVTMPKRYD-QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALE 315 GDAA G Y + AN+ + A + + Y A+Q + A+ Sbjct: 283 LEAIGDAALGAKSADHWVYTLNNSANREFIQAYRQKFNAVPNHFAVRGYDAMQFIVDAIN 342 Query: 316 RTGSD--EPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHA-DGSST 366 D L+ +++ + G + D + + + DG T Sbjct: 343 TVQGDLSNRQRLLGAIESAKIISPRGFVQMDPETNNVTQHVYAREVARIDGVLT 396 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.184 0.532 Lambda K H 0.267 0.0567 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,725,430,894 Number of Sequences: 3077464 Number of extensions: 150163061 Number of successful extensions: 555319 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3323 Number of HSP's successfully gapped in prelim test: 2519 Number of HSP's that attempted gapping in prelim test: 535880 Number of HSP's gapped (non-prelim): 7570 length of query: 369 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 239 effective length of database: 640,326,036 effective search space: 153037922604 effective search space used: 153037922604 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 95 (40.7 bits)