Phyre 2 Results for P27298

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Email | l.a.kelley@imperial.ac.uk
Description | P27298
Date | Wed Jan 25 15:20:46 GMT 2012
Unique Job ID | 7fdef948df9a1764

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c1y791_
Top template information
PDB header:hydrolase Chain: 1: PDB Molecule:peptidyl-dipeptidase dcp; PDBTitle: crystal structure of the e.coli dipeptidyl carboxypeptidase2 dcp in complex with a peptidic inhibitor
Confidence and coverage
Confidence: | 100.0% | Coverage: | 99%
670 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | T | N | P | L | L | T | P | F | E | L | P | P | F | S | K | I | L | P | E | H | V | V | P | A | V | T | K | A | L | N | D | C | R | E | N | V | E | R | V | V | A | Q | G | A | P | Y | T | W | E | N | L | C | Q | P | L | A | E | V | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | D | V | L | G | R | I | F | S | P | V | S | H | L | N | S | V | K | N | S | P | E | L | R | E | A | Y | E | Q | T | L | P | L | L | S | E | Y | S | T | W | V | G | Q | H | E | G | L | Y | K | A | Y | R | D | L | R | D | G | D | H | Y | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | T | L | N | T | A | Q | K | K | A | V | D | N | A | L | R | D | F | E | L | S | G | I | G | L | P | K | E | K | Q | Q | R | Y | G | E | I | A | T | R | L | S | E | L | G | N | Q | Y | S | N | N | V | L | D | A | T | M | G | W | T | K | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | V | T | D | E | A | E | L | A | G | M | P | E | S | A | L | A | A | A | K | A | Q | A | E | A | K | E | L | E | G | Y | L | L | T | L | D | I | P | S | Y | L | P | V | M | T | Y | C | D | N | Q | A | L | R | E | E | M | Y | R | A | Y | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | T | R | A | S | D | Q | G | P | N | A | G | K | W | D | N | S | K | V | M | E | E | I | L | A | L | R | H | E | L | A | Q | L | L | G | F | E | N | Y | A | F | K | S | L | A | T | K | M | A | E | N | P | Q | Q | V | L | D | F | L | T | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | L | A | K | R | A | R | P | Q | G | E | K | E | L | A | Q | L | R | A | F | A | K | A | E | F | G | V | D | E | L | Q | P | W | D | I | A | Y | Y | S | E | K | Q | K | Q | H | L | Y | S | I | S | D | E | Q | L | R | P | Y | F | P | E | N
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | K | A | V | N | G | L | F | E | V | V | K | R | I | Y | G | I | T | A | K | E | R | K | D | V | D | V | W | H | P | D | V | R | F | F | E | L | Y | D | E | N | N | E | L | R | G | S | F | Y | L | D | L | Y | A | R | E | N | K | R | G | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | A | W | M | D | D | C | V | G | Q | M | R | K | A | D | G | S | L | Q | K | P | V | A | Y | L | T | C | N | F | N | R | P | V | N | G | K | P | A | L | F | T | H | D | E | V | I | T | L | F | H | E | F | G | H | G | L | H | H | M | L | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540
Sequence |  | R | I | E | T | A | G | V | S | G | I | S | G | V | P | W | D | A | V | E | L | P | S | Q | F | M | E | N | W | C | W | E | P | E | A | L | A | F | I | S | G | H | Y | E | T | G | E | P | L | P | K | E | L | L | D | K | M | L | A | A | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600
Sequence |  | N | Y | Q | A | A | L | F | I | L | R | Q | L | E | F | G | L | F | D | F | R | L | H | A | E | F | R | P | D | Q | G | A | K | I | L | E | T | L | A | E | I | K | K | L | V | A | V | V | P | S | P | S | W | G | R | F | P | H | A | F | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660
Sequence |  | H | I | F | A | G | G | Y | A | A | G | Y | Y | S | Y | L | W | A | D | V | L | A | A | D | A | F | S | R | F | E | E | E | G | I | F | N | R | E | T | G | Q | S | F | L | D | N | I | L | S | R | G | G | S | E | E | P | M | D | L | F | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680
Sequence |  | R | F | R | G | R | E | P | Q | L | D | A | M | L | E | H | Y | G | I | K | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c1y791_ |

### PDB 1y79 chain 1

Region: 2 - 679
Aligned: 670
Modelled: 674
Confidence: 100.0%
Identity: 32%
PDB header:hydrolase
Chain: 1: PDB Molecule:peptidyl-dipeptidase dcp;
PDBTitle: crystal structure of the e.coli dipeptidyl carboxypeptidase2 dcp in complex with a peptidic inhibitor

Phyre2
2 |
| d1s4bp_ |

### PDB 1s4b chain P

Region: 15 - 678
Aligned: 643
Modelled: 664
Confidence: 100.0%
Identity: 31%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Neurolysin-like

Phyre2
3 |
| d1i1ip_ |

### PDB 1i1i chain P

Region: 4 - 678
Aligned: 654
Modelled: 675
Confidence: 100.0%
Identity: 30%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Neurolysin-like

Phyre2
4 |
| c3ce2A_ |

### PDB 3ce2 chain A

Region: 5 - 675
Aligned: 561
Modelled: 605
Confidence: 100.0%
Identity: 16%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative peptidase;
PDBTitle: crystal structure of putative peptidase from chlamydophila abortus

Phyre2
5 |
| c2h1jA_ |

### PDB 2h1j chain A

Region: 11 - 676
Aligned: 539
Modelled: 542
Confidence: 100.0%
Identity: 18%
PDB header:hydrolase
Chain: A: PDB Molecule:oligoendopeptidase f;
PDBTitle: 3.1 a x-ray structure of putative oligoendopeptidase f: crystals grown2 by microfluidic seeding

Phyre2
6 |
| c3sksA_ |

### PDB 3sks chain A

Region: 2 - 677
Aligned: 525
Modelled: 557
Confidence: 100.0%
Identity: 19%
PDB header:hydrolase
Chain: A: PDB Molecule:putative oligoendopeptidase f;
PDBTitle: crystal structure of a putative oligoendopeptidase f from bacillus2 anthracis str. ames

Phyre2
7 |
| d2ajfa1 |

### PDB 2ajf chain A domain 1

Region: 49 - 676
Aligned: 528
Modelled: 556
Confidence: 100.0%
Identity: 14%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Neurolysin-like

Phyre2
8 |
| d1uzea_ |

### PDB 1uze chain A

Region: 45 - 676
Aligned: 534
Modelled: 584
Confidence: 100.0%
Identity: 13%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Neurolysin-like

Phyre2
9 |
| c2c6nA_ |

### PDB 2c6n chain A

Region: 43 - 676
Aligned: 531
Modelled: 562
Confidence: 100.0%
Identity: 16%
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:angiotensin-converting enzyme, somatic isoform;
PDBTitle: structure of human somatic angiontensin-i converting enzyme n domain2 with lisinopril

Phyre2
10 |
| d1j36a_ |

### PDB 1j36 chain A

Region: 48 - 676
Aligned: 524
Modelled: 576
Confidence: 100.0%
Identity: 17%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Neurolysin-like

Phyre2
11 |
| c2qr4B_ |

### PDB 2qr4 chain B

Region: 23 - 675
Aligned: 476
Modelled: 513
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: B: PDB Molecule:peptidase m3b, oligoendopeptidase f;
PDBTitle: crystal structure of oligoendopeptidase-f from enterococcus faecium

Phyre2
12 |
| d1k9xa_ |

### PDB 1k9x chain A

Region: 45 - 676
Aligned: 464
Modelled: 487
Confidence: 100.0%
Identity: 15%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Neurolysin-like

Phyre2
13 |
| c1wgzC_ |

### PDB 1wgz chain C

Region: 47 - 676
Aligned: 463
Modelled: 487
Confidence: 100.0%
Identity: 18%
PDB header:hydrolase
Chain: C: PDB Molecule:carboxypeptidase 1;
PDBTitle: crystal structure of carboxypeptidase 1 from thermus thermophilus

Phyre2
14 |
| c3dwcA_ |

### PDB 3dwc chain A

Region: 54 - 676
Aligned: 449
Modelled: 475
Confidence: 100.0%
Identity: 15%
PDB header:hydrolase
Chain: A: PDB Molecule:metallocarboxypeptidase;
PDBTitle: trypanosoma cruzi metallocarboxypeptidase 1

Phyre2
15 |
| c3hq2A_ |

### PDB 3hq2 chain A

Region: 48 - 676
Aligned: 463
Modelled: 475
Confidence: 100.0%
Identity: 14%
PDB header:hydrolase
Chain: A: PDB Molecule:bacillus subtilis m32 carboxypeptidase;
PDBTitle: bsucp crystal structure

Phyre2
16 |
| d1g9ka2 |

### PDB 1g9k chain A domain 2

Region: 347 - 475
Aligned: 95
Modelled: 110
Confidence: 96.0%
Identity: 23%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Serralysin-like metalloprotease, catalytic (N-terminal) domain

Phyre2
17 |
| d1kapp2 |

### PDB 1kap chain P domain 2

Region: 361 - 475
Aligned: 89
Modelled: 95
Confidence: 95.9%
Identity: 21%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Serralysin-like metalloprotease, catalytic (N-terminal) domain

Phyre2
18 |
| d1k7ia2 |

### PDB 1k7i chain A domain 2

Region: 347 - 475
Aligned: 99
Modelled: 107
Confidence: 95.6%
Identity: 19%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Serralysin-like metalloprotease, catalytic (N-terminal) domain

Phyre2
19 |
| d1qiba_ |

### PDB 1qib chain A

Region: 359 - 475
Aligned: 96
Modelled: 99
Confidence: 95.5%
Identity: 13%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Matrix metalloproteases, catalytic domain

Phyre2
20 |
| d1y93a1 |

### PDB 1y93 chain A domain 1

Region: 359 - 475
Aligned: 95
Modelled: 99
Confidence: 95.4%
Identity: 14%
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Matrix metalloproteases, catalytic domain

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
89 |
90 |
91 |
92 |
93 |
94 |
95 |
96 |
97 |
98 |
99 |
100 |
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102 |
103 |
104 |
105 |
106 |
107 |
108 |
109 |
110 |
111 |
112 |
113 |
114 |
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116 |
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118 |
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122 |
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133 |
134 |
135 |
136 |
137 |
138 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1y791_ |
|  | 100.0 | 32 | PDB header:hydrolase Chain: 1: PDB Molecule:peptidyl-dipeptidase dcp; PDBTitle: crystal structure of the e.coli dipeptidyl carboxypeptidase2 dcp in complex with a peptidic inhibitor
2 | d1s4bp_ |
|  | 100.0 | 31 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Neurolysin-like
3 | d1i1ip_ |
|  | 100.0 | 30 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Neurolysin-like
4 | c3ce2A_ |
|  | 100.0 | 16 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative peptidase; PDBTitle: crystal structure of putative peptidase from chlamydophila abortus
5 | c2h1jA_ |
|  | 100.0 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:oligoendopeptidase f; PDBTitle: 3.1 a x-ray structure of putative oligoendopeptidase f: crystals grown2 by microfluidic seeding
6 | c3sksA_ |
|  | 100.0 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:putative oligoendopeptidase f; PDBTitle: crystal structure of a putative oligoendopeptidase f from bacillus2 anthracis str. ames
7 | d2ajfa1 |
|  | 100.0 | 14 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Neurolysin-like
8 | d1uzea_ |
|  | 100.0 | 13 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Neurolysin-like
9 | c2c6nA_ |
|  | 100.0 | 16 | PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:angiotensin-converting enzyme, somatic isoform; PDBTitle: structure of human somatic angiontensin-i converting enzyme n domain2 with lisinopril
10 | d1j36a_ |
|  | 100.0 | 17 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Neurolysin-like
11 | c2qr4B_ |
|  | 100.0 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:peptidase m3b, oligoendopeptidase f; PDBTitle: crystal structure of oligoendopeptidase-f from enterococcus faecium
12 | d1k9xa_ |
|  | 100.0 | 15 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Neurolysin-like
13 | c1wgzC_ |
|  | 100.0 | 18 | PDB header:hydrolase Chain: C: PDB Molecule:carboxypeptidase 1; PDBTitle: crystal structure of carboxypeptidase 1 from thermus thermophilus
14 | c3dwcA_ |
|  | 100.0 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:metallocarboxypeptidase; PDBTitle: trypanosoma cruzi metallocarboxypeptidase 1
15 | c3hq2A_ |
|  | 100.0 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:bacillus subtilis m32 carboxypeptidase; PDBTitle: bsucp crystal structure
16 | d1g9ka2 |
|  | 96.0 | 23 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain
17 | d1kapp2 |
|  | 95.9 | 21 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain
18 | d1k7ia2 |
|  | 95.6 | 19 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain
19 | d1qiba_ |
|  | 95.5 | 13 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
20 | d1y93a1 |
|  | 95.4 | 14 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
21 | d1hfca_ |
| not modelled | 95.4 | 15 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
22 | d2ovxa1 |
| not modelled | 95.3 | 14 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
23 | d1cgla_ |
| not modelled | 95.3 | 16 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
24 | d1hv5a_ |
| not modelled | 95.0 | 15 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
25 | d1j7na2 |
| not modelled | 94.8 | 14 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Anthrax toxin lethal factor, N- and C-terminal domains
26 | c1om8A_ |
| not modelled | 94.7 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:serralysin; PDBTitle: crystal structure of a cold adapted alkaline protease from pseudomonas2 tac ii 18, co-crystallyzed with 10 mm edta
27 | d1xuca1 |
| not modelled | 94.1 | 15 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
28 | c2xs4A_ |
| not modelled | 94.1 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:karilysin protease; PDBTitle: structure of karilysin catalytic mmp domain in complex with2 magnesium
29 | d1mmqa_ |
| not modelled | 94.0 | 10 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
30 | d1sata2 |
| not modelled | 93.9 | 16 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain
31 | c2cltB_ |
| not modelled | 93.8 | 14 | PDB header:hydrolase Chain: B: PDB Molecule:interstitial collagenase; PDBTitle: crystal structure of the active form (full-length) of human2 fibroblast collagenase.
32 | c2jsdA_ |
| not modelled | 93.7 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:matrix metalloproteinase-20; PDBTitle: solution structure of mmp20 complexed with nngh
33 | c2l0rA_ |
| not modelled | 93.6 | 14 | PDB header:hydrolase,toxin Chain: A: PDB Molecule:lethal factor; PDBTitle: conformational dynamics of the anthrax lethal factor catalytic center
34 | d1hova_ |
| not modelled | 93.5 | 13 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
35 | c1jiwP_ |
| not modelled | 93.5 | 20 | PDB header:hydrolase/hyrolase inhibitor Chain: P: PDB Molecule:alkaline metalloproteinase; PDBTitle: crystal structure of the apr-aprin complex
36 | c3g5cA_ |
| not modelled | 93.4 | 14 | PDB header:membrane protein Chain: A: PDB Molecule:adam 22; PDBTitle: structural and biochemical studies on the ectodomain of human adam22
37 | d1q3aa_ |
| not modelled | 93.3 | 9 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
38 | c3edhA_ |
| not modelled | 93.1 | 24 | PDB header:hydrolase Chain: A: PDB Molecule:bone morphogenetic protein 1; PDBTitle: crystal structure of bone morphogenetic protein 1 protease2 domain in complex with partially bound dmso
39 | c2xhqA_ |
| not modelled | 93.0 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:archaemetzincin; PDBTitle: crystal structure of archaemetzincin (amza) from archaeoglobus2 fulgidus at 1.45 a resolution
40 | c1slmA_ |
| not modelled | 93.0 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:stromelysin-1; PDBTitle: crystal structure of fibroblast stromelysin-1: the c-truncated human2 proenzyme
41 | c3p24C_ |
| not modelled | 92.9 | 26 | PDB header:hydrolase Chain: C: PDB Molecule:bft-3; PDBTitle: structure of profragilysin-3 from bacteroides fragilis
42 | d1bqqm_ |
| not modelled | 92.8 | 13 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
43 | d1eaka2 |
| not modelled | 92.5 | 13 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
44 | d1fbla2 |
| not modelled | 92.4 | 12 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
45 | d1i76a_ |
| not modelled | 92.3 | 12 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
46 | c3dtkA_ |
| not modelled | 92.2 | 16 | PDB header:gene regulation Chain: A: PDB Molecule:irre protein; PDBTitle: crystal structure of the irre protein, a central regulator2 of dna damage repair in deinococcaceae
47 | d1rm8a_ |
| not modelled | 92.0 | 12 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
48 | c3k7lA_ |
| not modelled | 91.9 | 28 | PDB header:hydrolase Chain: A: PDB Molecule:atragin; PDBTitle: structures of two elapid snake venom metalloproteases with2 distinct activities highlight the disulfide patterns in the3 d domain of adamalysin family proteins
49 | d1cxva_ |
| not modelled | 91.6 | 15 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
50 | c1yqyA_ |
| not modelled | 91.5 | 27 | PDB header:hydrolase Chain: A: PDB Molecule:lethal factor; PDBTitle: structure of b. anthrax lethal factor in complex with a2 hydroxamate inhibitor
51 | c1su3A_ |
| not modelled | 91.4 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:interstitial collagenase; PDBTitle: x-ray structure of human prommp-1: new insights into2 collagenase action
52 | d1hy7a_ |
| not modelled | 91.4 | 14 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain
53 | c3ba0A_ |
| not modelled | 91.3 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:macrophage metalloelastase; PDBTitle: crystal structure of full-length human mmp-12
54 | d1asta_ |
| not modelled | 91.1 | 23 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Astacin
55 | c3o0yC_ |
| not modelled | 90.9 | 13 | PDB header:lipid binding protein Chain: C: PDB Molecule:lipoprotein; PDBTitle: the crystal structure of the putative lipoprotein from colwellia2 psychrerythraea
56 | c3lqbA_ |
| not modelled | 90.9 | 24 | PDB header:hydrolase Chain: A: PDB Molecule:loc792177 protein; PDBTitle: crystal structure of the hatching enzyme zhe1 from the zebrafish danio2 rerio
57 | c3lq0A_ |
| not modelled | 89.4 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:proastacin; PDBTitle: zymogen structure of crayfish astacin metallopeptidase
58 | c1pwqA_ |
| not modelled | 89.2 | 29 | PDB header:hydrolase Chain: A: PDB Molecule:lethal factor; PDBTitle: crystal structure of anthrax lethal factor complexed with2 thioacetyl-tyr-pro-met-amide, a metal-chelating peptidyl3 small molecule inhibitor
59 | c2erpA_ |
| not modelled | 88.9 | 19 | PDB header:toxin Chain: A: PDB Molecule:vascular apoptosis-inducing protein 1; PDBTitle: crystal structure of vascular apoptosis-inducing protein-1(inhibitor-2 bound form)
60 | d1quaa_ |
| not modelled | 88.6 | 21 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like
61 | d1atla_ |
| not modelled | 88.5 | 19 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like
62 | d4aiga_ |
| not modelled | 88.1 | 21 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like
63 | c1yp1A_ |
| not modelled | 87.5 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:fii; PDBTitle: crystal structure of a non-hemorrhagic fibrin(ogen)olytic2 metalloproteinase from venom of agkistrodon acutus
64 | d1kufa_ |
| not modelled | 86.8 | 26 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like
65 | d1nd1a_ |
| not modelled | 86.6 | 24 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like
66 | d2i47a1 |
| not modelled | 86.6 | 27 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:TNF-alpha converting enzyme, TACE, catalytic domain
67 | c3nqzB_ |
| not modelled | 86.5 | 16 | PDB header:hydrolase Chain: B: PDB Molecule:secreted metalloprotease mcp02; PDBTitle: crystal structure of the autoprocessed vibriolysin mcp-02 with e369a2 mutation
68 | c2i47A_ |
| not modelled | 86.4 | 27 | PDB header:hydrolase Chain: A: PDB Molecule:adam 17; PDBTitle: crystal structure of catalytic domain of tace with inhibitor
69 | d1r55a_ |
| not modelled | 85.7 | 20 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like
70 | c1satA_ |
| not modelled | 85.5 | 16 | PDB header:hydrolase (serine protease) Chain: A: PDB Molecule:serratia protease; PDBTitle: crystal structure of the 50 kda metallo protease from s.2 marcescens
71 | c2fpqA_ |
| not modelled | 85.5 | 47 | PDB header:toxin Chain: A: PDB Molecule:botulinum neurotoxin d light chain; PDBTitle: crystal structure of botulinum neurotoxin type d light chain
72 | d1wnia_ |
| not modelled | 85.4 | 24 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like
73 | d1bswa_ |
| not modelled | 85.2 | 23 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like
74 | c1zb7A_ |
| not modelled | 84.5 | 41 | PDB header:toxin Chain: A: PDB Molecule:neurotoxin; PDBTitle: crystal structure of botulinum neurotoxin type g light chain
75 | d1epwa3 |
| not modelled | 84.2 | 35 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Clostridium neurotoxins, catalytic domain
76 | c1z7hA_ |
| not modelled | 84.1 | 35 | PDB header:hydrolase Chain: A: PDB Molecule:tetanus toxin light chain; PDBTitle: 2.3 angstrom crystal structure of tetanus neurotoxin light2 chain
77 | d1f83a_ |
| not modelled | 84.1 | 35 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Clostridium neurotoxins, catalytic domain
78 | c3k3qB_ |
| not modelled | 84.0 | 35 | PDB header:immune system Chain: B: PDB Molecule:botulinum neurotoxin type a; PDBTitle: crystal structure of a llama antibody complexed with the c.2 botulinum neurotoxin serotype a catalytic domain
79 | c2qn0A_ |
| not modelled | 84.0 | 29 | PDB header:toxin Chain: A: PDB Molecule:neurotoxin; PDBTitle: structure of botulinum neurotoxin serotype c1 light chain2 protease
80 | d3bona1 |
| not modelled | 83.9 | 35 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Clostridium neurotoxins, catalytic domain
81 | c2vqxA_ |
| not modelled | 83.9 | 9 | PDB header:hydrolase Chain: A: PDB Molecule:metalloproteinase; PDBTitle: precursor of protealysin, metalloproteinase from serratia2 proteamaculans.
82 | d1kjpa_ |
| not modelled | 83.9 | 13 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Thermolysin-like
83 | c2dw1B_ |
| not modelled | 83.8 | 33 | PDB header:apoptosis, toxin Chain: B: PDB Molecule:catrocollastatin; PDBTitle: crystal structure of vap2 from crotalus atrox venom (form 2-2 crystal)
84 | c1e1hC_ |
| not modelled | 83.7 | 35 | PDB header:hydrolase Chain: C: PDB Molecule:botulinum neurotoxin type a light chain; PDBTitle: crystal structure of recombinant botulinum neurotoxin type2 a light chain, self-inhibiting zn endopeptidase.
85 | d1u4ga_ |
| not modelled | 83.5 | 18 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Thermolysin-like
86 | d1npca_ |
| not modelled | 83.5 | 20 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Thermolysin-like
87 | c3k7nA_ |
| not modelled | 83.5 | 29 | PDB header:hydrolase Chain: A: PDB Molecule:k-like; PDBTitle: structures of two elapid snake venom metalloproteases with2 distinct activities highlight the disulfide patterns in the3 d domain of adamalysin family proteins
88 | c3nqxA_ |
| not modelled | 83.4 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:secreted metalloprotease mcp02; PDBTitle: crystal structure of vibriolysin mcp-02 mature enzyme, a zinc2 metalloprotease from m4 family
89 | d3btaa3 |
| not modelled | 83.4 | 35 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Clostridium neurotoxins, catalytic domain
90 | d1t3ca_ |
| not modelled | 83.3 | 35 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Clostridium neurotoxins, catalytic domain
91 | c2ilpA_ |
| not modelled | 83.3 | 35 | PDB header:hydrolase Chain: A: PDB Molecule:botulinum neurotoxin a light-chain; PDBTitle: clostridium botulinum serotype a light chain inhibited by 4-2 chlorocinnamic hydroxamate
92 | c2a97B_ |
| not modelled | 83.1 | 41 | PDB header:hydrolase Chain: B: PDB Molecule:botulinum neurotoxin type f; PDBTitle: crystal structure of catalytic domain of clostridium2 botulinum neurotoxin serotype f
93 | c3b8zB_ |
| not modelled | 83.0 | 46 | PDB header:hydrolase Chain: B: PDB Molecule:protein adamts-5; PDBTitle: high resolution crystal structure of the catalytic domain2 of adamts-5 (aggrecanase-2)
94 | c2xhlA_ |
| not modelled | 82.5 | 35 | PDB header:hydrolase Chain: A: PDB Molecule:botulinum neurotoxin b light chain; PDBTitle: structure of a functional derivative of clostridium2 botulinum neurotoxin type b
95 | c2x7mA_ |
| not modelled | 81.8 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:archaemetzincin; PDBTitle: crystal structure of archaemetzincin (amza) from methanopyrus2 kandleri at 1.5 a resolution
96 | c3zuqA_ |
| not modelled | 80.8 | 35 | PDB header:hydrolase Chain: A: PDB Molecule:botulinum neurotoxin type b; PDBTitle: crystal structure of an engineered botulinum neurotoxin2 type b-derivative, lc-b-gs-hn-b
97 | c3zusD_ |
| not modelled | 80.7 | 35 | PDB header:hydrolase/signaling protein Chain: D: PDB Molecule:botulinum neurotoxin type a, synaptosomal-associated PDBTitle: crystal structure of an engineered botulinum neurotoxin2 type a-snare23 derivative, lc-a-snap23-hn-a
98 | c2e3xA_ |
| not modelled | 80.7 | 23 | PDB header:hydrolase, blood clotting, toxin Chain: A: PDB Molecule:coagulation factor x-activating enzyme heavy chain; PDBTitle: crystal structure of russell's viper venom metalloproteinase
99 | c2rjqA_ |
| not modelled | 80.6 | 38 | PDB header:hydrolase Chain: A: PDB Molecule:adamts-5; PDBTitle: crystal structure of adamts5 with inhibitor bound
100 | c3ffzA_ |
| not modelled | 80.4 | 41 | PDB header:hydrolase Chain: A: PDB Molecule:botulinum neurotoxin type e; PDBTitle: domain organization in clostridium butulinum neurotoxin2 type e is unique: its implication in faster translocation
101 | c2j83B_ |
| not modelled | 80.0 | 30 | PDB header:hydrolase Chain: B: PDB Molecule:ulilysin; PDBTitle: ulilysin metalloprotease in complex with batimastat.
102 | d1bqba_ |
| not modelled | 79.7 | 24 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Thermolysin-like
103 | c2rjpC_ |
| not modelled | 79.1 | 25 | PDB header:hydrolase Chain: C: PDB Molecule:adamts-4; PDBTitle: crystal structure of adamts4 with inhibitor bound
104 | c3b4rB_ |
| not modelled | 79.1 | 42 | PDB header:hydrolase Chain: B: PDB Molecule:putative zinc metalloprotease mj0392; PDBTitle: site-2 protease from methanocaldococcus jannaschii
105 | d2ejqa1 |
| not modelled | 78.9 | 33 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:TTHA0227-like
106 | c2nyyA_ |
| not modelled | 78.3 | 35 | PDB header:toxin/immune system Chain: A: PDB Molecule:botulinum neurotoxin type a; PDBTitle: crystal structure of botulinum neurotoxin type a complexed with2 monoclonal antibody cr1
107 | c1s0bA_ |
| not modelled | 77.9 | 35 | PDB header:toxin, hydrolase Chain: A: PDB Molecule:botulinum neurotoxin type b; PDBTitle: crystal structure of botulinum neurotoxin type b at ph 4.0
108 | c2v4bB_ |
| not modelled | 77.1 | 31 | PDB header:hydrolase Chain: B: PDB Molecule:adamts-1; PDBTitle: crystal structure of human adamts-1 catalytic domain and2 cysteine-rich domain (apo-form)
109 | c3zurA_ |
| not modelled | 76.5 | 24 | PDB header:hydrolase/signaling protein Chain: A: PDB Molecule:botulinum neurotoxin type a, synaptosomal-associated PDBTitle: crystal structure of an engineered botulinum neurotoxin2 type a-snare23 derivative, lc0-a-snap25-hn-a
110 | c1eakA_ |
| not modelled | 70.2 | 33 | PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:72 kda type iv collagenase; PDBTitle: catalytic domain of prommp-2 e404q mutant
111 | c3cqbB_ |
| not modelled | 70.1 | 33 | PDB header:hydrolase Chain: B: PDB Molecule:probable protease htpx homolog; PDBTitle: crystal structure of heat shock protein htpx domain from vibrio2 parahaemolyticus rimd 2210633
112 | c3dl1A_ |
| not modelled | 70.0 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:putative metal-dependent hydrolase; PDBTitle: crystal structure of a putative metal-dependent hydrolase2 (yp_001336084.1) from klebsiella pneumoniae subsp. pneumoniae mgh3 78578 at 2.20 a resolution
113 | d1c7ka_ |
| not modelled | 66.8 | 40 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Zinc protease
114 | c3iukB_ |
| not modelled | 66.8 | 14 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of putative bacterial protein of unknown function2 (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold3 similar to that of m32 carboxypeptidases
115 | c3p1vB_ |
| not modelled | 65.7 | 36 | PDB header:hydrolase Chain: B: PDB Molecule:metallo-endopeptidase; PDBTitle: crystal structure of a metallo-endopeptidases (bacova_00663) from2 bacteroides ovatus at 1.93 a resolution
116 | c3c37B_ |
| not modelled | 64.8 | 31 | PDB header:hydrolase Chain: B: PDB Molecule:peptidase, m48 family; PDBTitle: x-ray structure of the putative zn-dependent peptidase q74d82 at the2 resolution 1.7 a. northeast structural genomics consortium target3 gsr143a
117 | c1l6jA_ |
| not modelled | 60.6 | 50 | PDB header:hydrolase Chain: A: PDB Molecule:matrix metalloproteinase-9; PDBTitle: crystal structure of human matrix metalloproteinase mmp92 (gelatinase b).
118 | c1gxdA_ |
| not modelled | 54.1 | 33 | PDB header:hydrolase Chain: A: PDB Molecule:72 kda type iv collagenase; PDBTitle: prommp-2/timp-2 complex
119 | d1lmla_ |
| not modelled | 51.7 | 12 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Leishmanolysin
120 | c3cskA_ |
| not modelled | 47.8 | 58 | PDB header:hydrolase Chain: A: PDB Molecule:probable dipeptidyl-peptidase 3; PDBTitle: structure of dpp iii from saccharomyces cerevisiae

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction |

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
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Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0