403 c3io3A_ Probab=96.18   E-value=0.092  Score=29.83  Aligned_columns=184  Identities=15%

Q ss_pred             CCCCCCCCCEEEEECCCCCCHHHHHHHHH--------CCCCEEECCCCCCCE-----------------EEEEEEEEECC
Q ss_conf             97675205479997297789989999984--------895132058788505-----------------25899997299
Q batch____         1 MSIDKSYCGFIAIVGRPNVGKSTLLNKLL--------GQKISITSRKAQTTR-----------------HRIVGIHTEGA   55 (301)
Q Consensus         1 m~~~k~~~g~VaIiG~pNvGKSTLiN~L~--------g~kva~vs~~~~TTr-----------------~~~~~~~~~~~   55 (301)
                      |..++.|  +|.+-|..||||||+.-.|.        |.++..+.--||-+.                 .........++
T Consensus        12 ~~~~~~r--Ii~~s~KGGVGKTT~a~nLA~~lAla~~g~kVLlvD~Dpq~~ls~~l~~~~~~~~~~i~~~~~l~~~~~~~   89 (230)
T c3io3A_          12 VQHDSLK--WIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAHNLSDAFCQKFGKDARKVEGLPNLSCMEIDP   89 (230)
T ss_dssp             HTCTTCS--EEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCHHHHHHTSCCCSSCEEETTEEEEEEEECCC
T ss_pred             HCCCCEE--EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCCCCCEEEECCCCHHHHHCCC
T ss_conf             1278738--99995899998899999999999985089970794079999888980866778705862175500323067


Q ss_pred             EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----
Q ss_conf             7999996678555442024788888778765320000112333332045666555421179858999987456578----
Q batch____        56 YQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQE----  131 (301)
Q Consensus        56 ~qi~~~DtPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ivViNKiDl~~~----  131 (301)
                      ..++++|+|+.. ......................+..........................+.-+++|++-....    
T Consensus        90 ~d~iiiD~~p~~-~~~~~~~~~~~~~~~~~~~~~~i~v~~p~~~~l~~~~~~~~~~~~~~~~~~~lviN~v~~~~~~~~~  168 (230)
T c3io3A_          90 YKTIIFDTAPTG-HTLRFLQSEVNEQFTNPELTTFICVCISEFLSLYETERMIQELMSYNMDVNSIVVNQLLFAECKRCE  168 (230)
T ss_dssp             CCEEEEECSSHH-HHHHHTCCHHHHHHTCTTTEEEEEEEESSHHHHHHHHHHHHHHHHTTCCCCEEEEEEECCCCCHHHH
T ss_pred             CCEEEEECCCCC-CHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHH
T ss_conf             888999678533-3136788867877512016721574067566699999999999874998566998201157621567


Q ss_pred             --HHHHHHHHHHHHHCCCCCCEEEEECCCCC--CHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             --77799999998860899829998678999--989999999996888888688210248
Q batch____       132 --KADLLPHLQFLASQMNFLDIVPISAETGL--NVDTIAAIVRKHLPEATHHFPEDYITD  187 (301)
Q Consensus       132 --~~~~~~~~~~~~~~~~~~~ii~vSA~~g~--gId~L~~~L~~~l~e~~~~~~~~~~td  187 (301)
                        .....+....+.+.....+++++-.....  +.+++...-.+.+.+.++..+.+..-+
T Consensus       169 ~r~~~~~~~~~~i~~~~~~~~i~~~p~~~~~~~~~~~l~~la~~l~~~~~p~~~~~i~~~  228 (230)
T c3io3A_         169 SRWKMQKKYLDQMGELYEDYHLVKMPLLGCEIRGVENLKKFSKFLLKPYDPKADSDIVFD  228 (230)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEECCSSCCCSHHHHHHHHHHHHSCCCTTTCGGGGGC
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             999999999999997418980898055477756189999999986015789882204423