212 c2atvA_ Probab=99.56   E-value=8e-14  Score=100.98  Aligned_columns=159  Identities=19%

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             79997297789989999984895132058788505258999972997999996678555442024788888778765320
Q batch____        10 FIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDV   89 (301)
Q Consensus        10 ~VaIiG~pNvGKSTLiN~L~g~kva~vs~~~~TTr~~~~~~~~~~~~qi~~~DtPG~~~~~~~~~~~~~~~~~~~~~~~~   89 (301)
                      .|+++|.+|||||||++++++.+..  ...+.+......................+  ......................
T Consensus         4 KivivG~~~vGKTsLi~~~~~~~f~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   79 (168)
T c2atvA_           4 KLAIFGRAGVGKSALVVRFLTKRFI--WEYDPTLESTYRHQATIDDEVVSMEILDT--AGQEDTIQREGHMRWGEGFVLV   79 (168)
T ss_dssp             EEEEECCTTSSHHHHHHHHHHSCCC--SCCCTTCCEEEEEEEEETTEEEEEEEEEC--CCCCCCHHHHHHHHHCSEEEEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCEEEEEEECC--CCCCCCCCCCCCCCCCCCEEEE
T ss_conf             9999869898999999999818367--87432001211000013661256655214--5321111122332122311210


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCC-HHHHHHH
Q ss_conf             000112333332045666555421179858999987456578777999999988608998299986789999-8999999
Q batch____        90 ELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLN-VDTIAAI  168 (301)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ivViNKiDl~~~~~~~~~~~~~~~~~~~~~~ii~vSA~~g~g-Id~L~~~  168 (301)
                      ............................|++++.||.|+.................... +++.+||++|.| |+++++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~k~d~~~~~~~~~~~~~~~~~~~~~-~~~e~SAktg~gnV~e~f~~  158 (168)
T c2atvA_          80 YDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELAC-AFYECSACTGEGNITEIFYE  158 (168)
T ss_dssp             EETTCHHHHHTHHHHHHHHHHHHTTSCCCEEEEEECGGGGGGCCSCHHHHHHHHHHHTS-EEEECCTTTCTTCHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHCCC-CEEEEECCCCCCCHHHHHHH
T ss_conf             11011233001100013567631567760330365531011102435899999997498-19999706888518999999


Q ss_pred             HHHHC
Q ss_conf             99968
Q batch____       169 VRKHL  173 (301)
Q Consensus       169 L~~~l  173 (301)
                      |.+.+
T Consensus       159 l~~~i  163 (168)
T c2atvA_         159 LCREV  163 (168)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999