BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (426 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P54901 Stationary phase-inducible protein csiE n=121 Ta... 875 0.0 UniRef50_B2VI26 Stationary phase-inducible protein n=7 Tax=Enter... 347 5e-94 UniRef50_A8GHY9 Transcriptional antiterminator, BglG n=4 Tax=Ent... 316 1e-84 UniRef50_A4TMW0 RNA-binding protein n=24 Tax=Yersinia RepID=A4TM... 301 4e-80 UniRef50_D0ZD91 Transcriptional antiterminator n=1 Tax=Edwardsie... 134 8e-30 UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR fa... 86 2e-15 UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR fa... 79 3e-13 UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_B... 70 2e-10 UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 ... 67 1e-09 UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR fa... 65 7e-09 UniRef50_UPI0001C35E6F mannitol operon transcriptional antitermi... 64 1e-08 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 63 2e-08 UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacill... 62 5e-08 UniRef50_Q63A16 Possible transcriptional antiterminator, bglG fa... 60 2e-07 UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotrans... 56 2e-06 UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clo... 55 3e-06 UniRef50_B9Y618 Putative uncharacterized protein (Fragment) n=1 ... 54 1e-05 UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 ... 53 3e-05 UniRef50_C2FLI0 BglG family transcriptional antiterminator n=2 T... 53 3e-05 UniRef50_Q5WJ14 BglG family transcriptional antiterminator n=2 T... 52 6e-05 UniRef50_A5Z559 Putative uncharacterized protein n=1 Tax=Eubacte... 51 8e-05 UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Ba... 51 1e-04 UniRef50_O31644 Putative phosphotransferase enzyme IIA component... 51 1e-04 UniRef50_Q899A8 Transcriptional regulatory protein n=3 Tax=Clost... 50 1e-04 UniRef50_A8FDW3 PTS family L-ascorbate (L-asc) porter component ... 48 6e-04 UniRef50_C9AU45 BglG family transcriptional antiterminator n=2 T... 48 7e-04 UniRef50_C0ES87 Putative uncharacterized protein n=1 Tax=Eubacte... 48 7e-04 UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR fa... 47 0.001 UniRef50_D2EIK0 Transcription regulator n=1 Tax=Pediococcus acid... 46 0.003 UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacte... 45 0.004 UniRef50_C5BEV1 Putative uncharacterized protein n=1 Tax=Edwards... 45 0.004 UniRef50_C9A0D6 BglG family transcriptional antiterminator n=1 T... 45 0.005 UniRef50_C6IZU2 PRD domain-containing protein n=1 Tax=Paenibacil... 45 0.006 UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Cl... 45 0.007 UniRef50_Q8NYI2 MW0220 protein n=49 Tax=Staphylococcus aureus Re... 45 0.007 UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteri... 44 0.008 UniRef50_C9AYJ5 Transcriptional antiterminator n=4 Tax=Enterococ... 44 0.009 UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacte... 44 0.009 UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.011 UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Cl... 44 0.011 UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Ent... 44 0.012 UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostri... 44 0.013 UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=... 44 0.013 UniRef50_UPI0001BC63E8 transcriptional regulatory protein n=3 Ta... 44 0.015 UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing prot... 44 0.015 UniRef50_C5J5A2 PRD activator n=16 Tax=Enterobacteriaceae RepID=... 43 0.019 UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enteroc... 43 0.023 UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Ali... 42 0.032 UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium... 42 0.033 UniRef50_Q7X1P0 Putative transcriptional regulator n=1 Tax=Lacto... 42 0.034 UniRef50_D2ELR0 BglG family transcriptional antiterminator n=1 T... 42 0.036 UniRef50_C9KLV3 Putative multidomain protein n=1 Tax=Mitsuokella... 42 0.039 UniRef50_UPI0001C425D1 mannitol operon transcriptional antitermi... 42 0.040 UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecali... 42 0.042 UniRef50_C6VLN1 Putative uncharacterized protein n=1 Tax=Lactoba... 42 0.044 UniRef50_C3W9R0 Predicted protein n=1 Tax=Fusobacterium mortifer... 42 0.055 UniRef50_A8RAP2 Putative uncharacterized protein n=1 Tax=Eubacte... 41 0.069 UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactoba... 41 0.071 UniRef50_C6JLH1 Transcription regulator n=1 Tax=Fusobacterium va... 41 0.072 UniRef50_D1YDT2 PRD domain protein n=4 Tax=Propionibacterium acn... 41 0.074 UniRef50_B6GAR0 Putative uncharacterized protein n=1 Tax=Collins... 41 0.081 UniRef50_Q1JEW2 Transcription antiterminator, BglG family / PTS ... 41 0.100 >UniRef50_P54901 Stationary phase-inducible protein csiE n=121 Tax=Enterobacteriaceae RepID=CSIE_ECOLI Length = 426 Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/426 (100%), Positives = 426/426 (100%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR Sbjct: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA Sbjct: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE Sbjct: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR Sbjct: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR Sbjct: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR Sbjct: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR Sbjct: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 Query: 421 KMLESA 426 KMLESA Sbjct: 421 KMLESA 426 >UniRef50_B2VI26 Stationary phase-inducible protein n=7 Tax=Enterobacteriaceae RepID=B2VI26_ERWT9 Length = 422 Score = 347 bits (890), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 189/421 (44%), Positives = 255/421 (60%), Gaps = 4/421 (0%) Query: 5 LAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQL 64 L+ + LS QRRC++LL L P T+A+ +LNG D +A DI+E EI R H L Sbjct: 6 LSEGAALSTAQRRCRLLLMLLLPNHDVTLASICQLNGGDRTLARQDIAELAAEIQRNHHL 65 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 + G + GT L+QRLCL H LRR RL P F++ F A+K L + + + Y Sbjct: 66 AINPDEAGHLYLSGTPLDQRLCLLHGLRRALRLSPQFVSGWFADAVKRRLLTQPVDKALY 125 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 D+ NL L+ CS++L + F +RD FL ++L+Y L H P+F+P QR+W E Sbjct: 126 DEHNLTVLIQHCSQQLAREFSARDGFFLQIWLRYSLAWH---CQPEFSPRQRQWLLGKTE 182 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 + +A+EI R WQ+R Q + + L+FS L P + +R L Q+++ + Sbjct: 183 YVLAKEIARCWQKRGYQ-TDAHLAMLLTLMFSQLHTPLAATVTGENERALLQAVESSIAR 241 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F+ + + F L +LYTHLAQAL R+LFAIGID+ L E YPRL+RTTR A+ Sbjct: 242 FQHIAGIEFRHRPDLSARLYTHLAQALERALFAIGIDDNLSENICLHYPRLLRTTRKAMK 301 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 FE +Y V S +E LVA+IFGAWL+QEN LHEKQ++LLTG++ E QIEQQLRELTL Sbjct: 302 PFEQQYAVTFSHQEMELVAIIFGAWLVQENALHEKQVLLLTGDNPGLEQQIEQQLRELTL 361 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 LPLNIK+ V F AP G L+I+PY LPL+SPP IYT+L L HQ +R +LE Sbjct: 362 LPLNIKYQDVHDFQHNSAPPGITLVISPYPTSLPLYSPPFIYTELPLGEHQLRSLRTLLE 421 Query: 425 S 425 S Sbjct: 422 S 422 >UniRef50_A8GHY9 Transcriptional antiterminator, BglG n=4 Tax=Enterobacteriaceae RepID=A8GHY9_SERP5 Length = 421 Score = 316 bits (809), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 177/425 (41%), Positives = 246/425 (57%), Gaps = 13/425 (3%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 AP LS QRRC +LL L+ P + T S++NGV I DI+E EI R+H L Sbjct: 6 APVPELSGQQRRCHLLLMLYAPVPAVQLETISQINGVSPPITRQDIAEVASEIQRFHHLE 65 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + D YR+ G+ LNQRLCL HWLRR R P FI F+ L+ L + + Sbjct: 66 IDGNPDEGYRIRGSALNQRLCLLHWLRRALRCSPEFIDQHFSRWLQQALGQSADLTPQLE 125 Query: 126 D--TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 + +ALVN + F+ RD FL YL+YC ++ P F+P QR W Sbjct: 126 QCISEYEALVN-------RSFDRRDRQFLQHYLRYCAWENQRRRHPTFSPAQRDWLHQKP 178 Query: 184 EFQVAQEIGRHWQRRALQPVPPD--EPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 E Q + H L +PP+ E F+ L+F+ML+ + D +L +I+ + Sbjct: 179 EHQAT--LLLHQSLNQLFALPPETSENDFLVLMFTMLKNHSYHSNDSTEDLRLMAAIENM 236 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 V F+++ + F ++ L QL+ HLA A+ R F IGIDNTL EE R YPRL+RT + Sbjct: 237 VERFQQISGMTFSSKEDLISQLFAHLAPAVERCRFEIGIDNTLLEEVERKYPRLMRTAQE 296 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRE 361 ALA E EYG+H S EE+GLVA+ FGAWLMQ N L EKQ++LLT ++ + E ++E Q+RE Sbjct: 297 ALAPLEQEYGIHFSSEEAGLVAISFGAWLMQGNALQEKQVLLLTLDNPQLEDEVEYQIRE 356 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 LTLLPLNIK++ ++ +L +GAP+G L+I PY PPLIYT+L L Q++ IR Sbjct: 357 LTLLPLNIKYLPLRDYLHSGAPQGVTLVITPYATEHSAPQPPLIYTELPLARQQRKFIRA 416 Query: 422 MLESA 426 +LE++ Sbjct: 417 LLETS 421 >UniRef50_A4TMW0 RNA-binding protein n=24 Tax=Yersinia RepID=A4TMW0_YERPP Length = 453 Score = 301 bits (770), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 166/443 (37%), Positives = 246/443 (55%), Gaps = 21/443 (4%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 P L+ LS QRRC +LL LF P + T S+ NGVD DI+E EI R++ Sbjct: 9 PRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQRFY 68 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPAL------------ 110 L L D Y++ G+ L++RLCL HWLRRG R CP FI F+P L Sbjct: 69 HLELNASADDYYQINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLS 128 Query: 111 ---------KSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLL 161 +S L++ + ++ + L+ +V C L ++ +D FL LYL YC+ Sbjct: 129 SALRRSTLRQSTLRQSTLRQSILRQSTLRQIVYQCEPHLNRQLSEKDRQFLQLYLAYCVW 188 Query: 162 QHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP 221 ++ PQ + Q++W E A + R + P+ E + L+ +M++ Sbjct: 189 ENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLILMLTMIKAH 248 Query: 222 DPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGID 281 D +L +IK+L++ F+ L + F + L QL+ HLA A+ R F IGID Sbjct: 249 HYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGID 308 Query: 282 NTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQI 341 ++LP++ +++YPRL+RTT+ AL FE EY + S EE L+A+ FGAWL+Q N L EKQI Sbjct: 309 HSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQI 368 Query: 342 ILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFS 401 +LLT ++ EAQ+EQQ+RELTLLPL+IK++S +LQ+GAP G A+++ PY + + Sbjct: 369 LLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYLQSGAPAGTAVVLTPYVLQSTESA 428 Query: 402 PPLIYTDLTLTTHQQEQIRKMLE 424 PPLI LT Q Q+ ++LE Sbjct: 429 PPLIQISFPLTEPQSIQLCRILE 451 >UniRef50_D0ZD91 Transcriptional antiterminator n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZD91_EDWTE Length = 343 Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 107/342 (31%), Positives = 158/342 (46%), Gaps = 14/342 (4%) Query: 5 LAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQL 64 L PP S +R C + L L P TMA +L D A D++ +I+RYH L Sbjct: 7 LPPPH--SRAERHCNLALLLLLPTAPLTMARLCKLQQQTPDEAEQDLNHLVNDIMRYHAL 64 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 ++ YR++G RLCL HWL+R R P+ +PAL R+ + Sbjct: 65 HISFHPRHGYRLQGPAYEWRLCLLHWLQRTLRYFPANAARLLSPALPPAFPRQTLCERL- 123 Query: 125 DDTNLQALVNLCSRRL--QKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPL-----QRR 177 LQ++ L S+ + F R + + ++Y +Q G + P +RR Sbjct: 124 ----LQSVPRLESQAIPASAAFTPRQRQLIDIMMRYAAVQRRGGRSDSLMPCWLLPYRRR 179 Query: 178 WAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS 237 W + E+ VA+ + R + A V E LF LL ++L+ + +D L Sbjct: 180 WLQQKEEYAVAEALCRIYIGDAPADVLDQERLFATLLLTLLKNHSHSPRENAQDSALMHE 239 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 I+R V+ +VR + LC +L+ HL A+ R+LF I I L E A +P L+ Sbjct: 240 IERCVDCVERDSDVRLSQRERLCARLFAHLGAAIERALFDIRIGTPLAAELASHHPALLA 299 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK 339 TR A+AG E Y + S EE L+AV GAWLMQ L E+ Sbjct: 300 LTRRAIAGLEQRYRIRFSPEELSLIAVSIGAWLMQAGRLQEQ 341 >UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5DAC1_GEOSW Length = 709 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 96/422 (22%), Positives = 180/422 (42%), Gaps = 15/422 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 +A +R+ + + L + SE V + D+ + R L+ QLTL Sbjct: 89 TAKERQAWLAIYLLVKDQQLFLEDLSEKTRVSRNTTIEDLKKL-RAQLKSFQLTLYFNRQ 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPA-LKSELKRRGIARNFYDDTNLQ 130 Y ++G N+R + ++L + P+ Q A LK L +N L+ Sbjct: 148 TGYLIKGKEENKRKAIVYYLSL---VIPNQQDWQTVLANLKRLLLPDKDEQNMVILAELK 204 Query: 131 ALVNL---CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++N+ C + L +F +H L L + G +F+P+++ + EF+ Sbjct: 205 CILNILNECEKDLNIQFADDVLHHLALRFWLFGKRIVQGKKIEFDPIEKEVIQQTREFEA 264 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMA--LLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 A++ + + +P DE ++A LL + ++ H +L+ ++++V F Sbjct: 265 AKKASKKLESIFQTSIPDDEVYYLATHLLSTKVQYFGNTIQGHDDYGKLKHIVQKMVTEF 324 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + V F + Q + L HL A R + + ++N L E Y L T+ + Sbjct: 325 QAFACVTFPNRQEVEKNLLLHLKPAYYRIKYGLQVENPLVELIKTKYKDLFLITKKVIHH 384 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRELT 363 FE+ G +SDEE+ L+A+ FG WL +E K+ IL+ N A + QQL L Sbjct: 385 FETAIGKKVSDEETALIALHFGGWLRREGIQPKERKRAILICANGIGTSAILRQQLEGLF 444 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ +SV+ + + P + A T+ + P+ + LT ++E + K + Sbjct: 445 STVDFVETISVRDYEKRDFP---DIDFAVSTVAVSKKKHPVFVVNPILTDQEKETLLKKV 501 Query: 424 ES 425 + Sbjct: 502 HA 503 >UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Geobacillus RepID=C9RTV4_GEOSY Length = 714 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/302 (22%), Positives = 133/302 (44%), Gaps = 7/302 (2%) Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 N+ ++N C + L +F ++ L L + G F+P+++ + EF+ Sbjct: 204 NILDVLNECEKNLNIQFADDVLYHLALRFWLFGKRIVQGKKIDFDPVEKEVIQQTKEFEA 263 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMA--LLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 AQ + +P DE ++A LL S ++ +H + L+ ++++V F Sbjct: 264 AQTARSKLESIFQTSIPDDEVYYLATHLLSSKVQYSGNSLQSHDDYKNLQNIVQKMVTEF 323 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + F + + + + L HL A R + + ++N + E Y L T+ + Sbjct: 324 QAFTCITFPNRKAVEENLLLHLKPAYYRIKYGLQVENPMIELIKTKYKDLFLITKKVIHH 383 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRELT 363 FE+ G +SDEE+ L+A+ FG WL +E K+ IL+ + + +QL L Sbjct: 384 FETAIGKKVSDEEAALIAIHFGGWLRKEGIQPKERKRAILICASGIGTSTILRKQLEGLF 443 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ +SV+ + Q + A T+P+ P+ + LT ++E + K + Sbjct: 444 STVDFVETISVRDYEQRDF---HDIDFAVSTVPVSKKKHPVFVVNPILTDQEKETLLKKV 500 Query: 424 ES 425 + Sbjct: 501 HA 502 >UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_BACHD Length = 701 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 84/422 (19%), Positives = 180/422 (42%), Gaps = 15/422 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 SA +R+ +++ L + + GV + DI E+ +H L L Sbjct: 89 SAQERKAWVVIYLLTRLEPLFLEHLMDRTGVSRNTTIDDIKCLKDELNNFH-LALEFERK 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 Y + G ++R L ++L + L ++ +P +R R F + LQ Sbjct: 148 DGYTISGDETDKRKALVYYLSQA--LPQQNWETELSPIRIFLRTKRDNGRIFTIE-ELQK 204 Query: 132 LVNLCS---RRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 + ++ S + L+ ++ +H L L + + G + +PL+++ + E++ A Sbjct: 205 VYDVISESEKVLKIQYTDDVLHSLSLRFLLFMKRVAKGKFIKVHPLEKQVLKGTKEYEAA 264 Query: 189 QEIGRHWQRRALQPVPPDEPLFMA--LLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 + + ++ P +E L++ +L S + + ++ + ++L + +VN F+ Sbjct: 265 KVMSFKLEQAFGVHYPDEEVLYLTTHILSSKINYANGEIESRKESQELTHIVTSMVNDFQ 324 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + V F +++ L L+ H+ A R + + ++N + E YP L TR + Sbjct: 325 KYACVVFEEKELLEKNLFFHIKPAFYRIKYGLEVENNIAESIKTSYPELFLLTRKVVHYL 384 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLRELTL 364 E G ++D E + + F W+ +E + K+ +++ N ++ QL L Sbjct: 385 ERYVGKSVNDNEVAFITMHFVGWMRREGTIPTKRKKALIVCANGVGTSQFLKNQLEGLFP 444 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 IK S++ + +T P II+ T +P + P+ + LT ++E++ K + Sbjct: 445 AVDIIKTCSIREYEKT--PVEVDFIIS--TTSIPEKNVPIFIVNPILTETEKERLLKSVH 500 Query: 425 SA 426 A Sbjct: 501 VA 502 >UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D94 Length = 696 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 118/295 (40%), Gaps = 28/295 (9%) Query: 56 REILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWL---------RRGFRLCPSFITSQF 106 R ++ +L +T Y V+G ++R L H+ + F L P Sbjct: 123 RSEMKSVKLKVTYDRKRGYGVQGEERDKRKTLSHYFGQIFGHAGWEQAFNLNPESGVPDL 182 Query: 107 TPALKSELKRRGIARNF--YDDTNLQALVNLCSR---RLQKRFESRDIHFLCLYLQYCLL 161 P L ++ G+ + + D+ + V+L L RF LY++ Sbjct: 183 APLLFPPMEEGGLEQVYRLISDSEITLGVDLTDEMLFHLTARF--------LLYVRRIQT 234 Query: 162 QHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP 221 I + RR E ++A+ +G+ + VP DE + A+ RV Sbjct: 235 AQWVSIDDDERSVLRRTPEYEAAARIAEGLGQMFG----VSVPDDEVCYFAMHLLGARVN 290 Query: 222 --DPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIG 279 + + + + +QLR + +HF+ V + + + + L HL A R L+ + Sbjct: 291 RMEQMTGSEEVLKQLRNVTTEMTDHFQRYACVFLPNREAMEENLLVHLKPAYYRILYGLS 350 Query: 280 IDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN 334 ++N L E Y + TR + A FE G L D E G +A+ FG WL +EN Sbjct: 351 LENPLLENIRSKYGEVFELTRRSAAPFEQLVGRKLDDHEIGYLAMHFGGWLRREN 405 >UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QUF4_9BACI Length = 685 Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 1/192 (0%) Query: 143 RFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQP 202 R+ + IH L +YL L + G Q + ++ +S E++ A I + Sbjct: 206 RYTNDVIHTLTVYLSIFLKRWIRGKYIQMDEQEKEVLQSTREYKTAHHIITQIENVFQVD 265 Query: 203 VPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCD 261 VP DE ++ RV D + D + L+Q IK +V+ F++ V+F + L Sbjct: 266 VPQDEICYLTTYLLGSRVTDDKQIDQNNEIATLKQIIKNMVDDFQKYACVQFKHREELEK 325 Query: 262 QLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGL 321 L H+ A R + + + N L + Y + T+ + E+ G + D+E Sbjct: 326 NLLIHMKPAYYRLKYGLHLQNELTQSVKANYHDIFTLTKKVVHHVENVVGQSVGDDEIAY 385 Query: 322 VAVIFGAWLMQE 333 +A+ FG WL +E Sbjct: 386 IAMHFGGWLDRE 397 >UniRef50_UPI0001C35E6F mannitol operon transcriptional antiterminator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35E6F Length = 695 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 3/159 (1%) Query: 207 EPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSI-KRLVNHFRELGNVRFYDEQGLCDQLY 264 E ++++L F R+ R +A D + I K L+ F V F ++ L LY Sbjct: 261 EKVYLSLHFLGGRLESYSRTEADTGDNEFALEITKNLITEFEREACVLFERKEDLIRNLY 320 Query: 265 THLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAV 324 H+A +L R F I I N + E+ R YP + TTRA + E + GV +SD E +A+ Sbjct: 321 RHIAASLYRYRFGIQIGNPMAEDIRREYPYIFDTTRAVVKYLEQQIGVLISDSEVAYLAL 380 Query: 325 IFGAWL-MQENDLHEKQIILLTGNDSEREAQIEQQLREL 362 FGA L E D E +I++ N I +L+ + Sbjct: 381 HFGAHLEYAERDEKELRILVACMNGVATGNMISHELKRI 419 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 97/444 (21%), Positives = 189/444 (42%), Gaps = 40/444 (9%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + PS +RR IL L Q + FS+ GV S D+ E + I + Sbjct: 76 LDIVGYPSEFETEERRKMILSELLQLNEPVKLEYFSKKFGVTTSTISYDLKELEKWIEK- 134 Query: 62 HQLTLTT--GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSE-LKRRG 118 LTL T GY G Y + G+ + R + ++L F T+ LK+ L + Sbjct: 135 QGLTLITKPGY-GVY-ISGSENSFRKAIANFLYENFD------TADLIDFLKTGYLAKNN 186 Query: 119 IARNF---------YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCL----LQHHA 165 I +N YD T L+ + + Q +E + +L L + L LQ+ Sbjct: 187 IEKNIDLRLLNLIDYD-TVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIKRLQNGE 245 Query: 166 GITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR 225 I + LQ + E++ A+++ ++ Q P+P DE ++ + + + Sbjct: 246 TIEMGEDNLQE--LKKTNEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAKYRSTTQ 303 Query: 226 DAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLP 285 + + +D ++ + ++ ++ +V F +++ L D L +HL A+ R + I N L Sbjct: 304 NYNDKDIEIIA--RDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIRNPLL 361 Query: 286 EEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILL- 344 E+ YP L + + + + ++E G +A+ FGA L ++ + +K I++ Sbjct: 362 EDIKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYIAMHFGAALERKKEAAKKYNIMVV 421 Query: 345 --TGNDSEREAQIEQQLRELTLLP-LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFS 401 +G + R + +L + P +NI ++ L+ R +I T+PL + Sbjct: 422 CASGIGTSR-----MLMSKLQMFPQINIVDVTSSIKLKDLKGRDDIDLIVS-TIPLDIKD 475 Query: 402 PPLIYTDLTLTTHQQEQIRKMLES 425 ++ + L E+++K L + Sbjct: 476 KKVVVVNPLLLKEDVEKLKKALNT 499 >UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus RepID=Q5KYD3_GEOKA Length = 684 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 1/193 (0%) Query: 143 RFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQP 202 R+ I L +YL + G Q + ++ S E+Q+A + R + + Sbjct: 205 RYTGEVIQTLPIYLALFQRRWARGKFVQMDEQEKEVLRSMREYQIADHLVRRIENVSQIS 264 Query: 203 VPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCD 261 +P DE ++ RV D + D + L++ I+ +V+ F+ V+F + L Sbjct: 265 IPDDEVCYLTTHLLSFRVADDKQMDQNDDITTLKRIIRHMVDDFQTYACVQFKRREELEK 324 Query: 262 QLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGL 321 L H+ A R + + N L E Y L T+ + ES G +SD+E Sbjct: 325 NLLVHMKPAYYRLKYGFHLQNDLTESVKANYQDLFTLTKKVVHHLESVVGQPVSDDEIAY 384 Query: 322 VAVIFGAWLMQEN 334 +A+ FG WL +E Sbjct: 385 IAMHFGGWLDREG 397 >UniRef50_Q63A16 Possible transcriptional antiterminator, bglG family n=15 Tax=Bacillus cereus group RepID=Q63A16_BACCZ Length = 701 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%) Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMA--LLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 +F+ A+ I + ++R + P DE ++ LL + + + + + + D ++ + + Sbjct: 260 QFEAAKYIAKQFERAFVVKFPIDEIYYITTHLLGAKVNYQENVYEKNNMD-EIHSIVDCM 318 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 + F+ V F D GL LY H+ A R + I I+N L Y + T+ Sbjct: 319 IKDFQHYACVLFQDFNGLFTDLYLHMKPAFYRVKYGIEIENPLRNTIQENYEEVYFLTKK 378 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQE 333 + FE +SD+E V + FGAW+ +E Sbjct: 379 VIHHFEEYVRKSVSDDEIAYVTMHFGAWMRKE 410 >UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXJ3_9BACL Length = 696 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 7/209 (3%) Query: 166 GITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD-PL 224 G T Q ++ L+F+ A +I R VP DE ++A+ +V + Sbjct: 232 GRTVQLEEEEKAALRETLQFKAATQIADELGERFDLRVPEDEIGYLAIYLLAAKVNRVEV 291 Query: 225 RDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTL 284 ++LR + + +++ F + G V F + + L QL+ H+ R + + IDN L Sbjct: 292 ESDTWETKRLRAATEEVIDLFAKNGCVYFQNREALVKQLFLHVKSMFYRIKYGLTIDNPL 351 Query: 285 PEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ---- 340 ++ Y + TR + + E + L E + + FG WL +E E + Sbjct: 352 TDKILEEYREVYELTRKSASPLERLFEKPLGRHEIAYLTMHFGGWLKREQAKTEHRKRAA 411 Query: 341 IILLTGNDSER--EAQIEQQLRELTLLPL 367 ++ + G + R + Q+EQ L L+ + Sbjct: 412 VVCVNGVSASRLLKNQLEQLFPSLDLVAV 440 >UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQ92_CLOB8 Length = 641 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 85/355 (23%), Positives = 147/355 (41%), Gaps = 58/355 (16%) Query: 11 LSAPQRRCQILLTLF----QPGLTATMATFSELN-GVDDDIASLDISETGREILRYHQLT 65 L++PQRR +L +P LT +A E+N G I+ L + REIL + L Sbjct: 87 LNSPQRRMAFILYKLMNSEEPYLTDDLA--CEMNVGRTTVISDL---KKMREILNNYDLK 141 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + + ++GT LN R + L I ++ EL Sbjct: 142 IIGKTNNGLALKGTELNIRFLVLENLYE-------MIYGEY------EL----------- 177 Query: 126 DTNLQALVNLCSRRLQ---KRFESRDIHFLCLYLQYCLLQHHAG-ITPQFNPLQRRWAES 181 D ++ LV + + Q FES IH L + L L H ++ ++ L R W Sbjct: 178 DEDVIDLVKEITDQYQFDTTTFESF-IHSLVVTLDRLLNGHTINTLSEKYGELLRSW--- 233 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 EF + I ++R +P E +F+AL + P + ++ + + L Sbjct: 234 --EFTLVNTISDAVEKRLTISIPIKERIFLALPIIGMNTPTNIEGISPH-VEITEEVSNL 290 Query: 242 VNHFRE-----LG-NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 VNH E +G N+ D L D +Y H+A +NR + + I N + +E + Y Sbjct: 291 VNHILERIKYDMGLNITLDD--ILKDFVY-HMAFLVNRLKYGVHIHNPIVDEIRKKYKVA 347 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL----MQENDLHEKQIILLTG 346 + A E V ++ +E G +A FG ++ ++++ +++ +I TG Sbjct: 348 YKMAELARDVIEKSLDVKMTQDEVGFIAAYFGVFISEQQIEKSKIYKVAVICGTG 402 >UniRef50_B9Y618 Putative uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y618_9FIRM Length = 466 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 1/116 (0%) Query: 224 LRDAHQ-RDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDN 282 + D H +D + S+ ++ F + +RF ++ L D ++ H A R L+ I+N Sbjct: 322 MSDNHDAKDMDIYLSVYEMIEAFETVSCIRFNHKEQLVDYIFQHWKAAYYRILYDFHIEN 381 Query: 283 TLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE 338 + E Y L TR ++ E + +EE G + +++G WL +E + + Sbjct: 382 EMLEAIKNRYTYLFDLTRRSIYPLEKTLNKPIPEEEIGFITILYGGWLRREKQMDQ 437 >UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2H7N3_ENTFC Length = 661 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 74/339 (21%), Positives = 147/339 (43%), Gaps = 21/339 (6%) Query: 92 RRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLC---SRRLQKRFESRD 148 RR F + +F + +LK L G +R F+ D + + LV + +R + + Sbjct: 166 RRHF-IMDTFFGNHCGNSLKEYL---GQSR-FFTDISFEELVIIILDETREAKLKVSDFI 220 Query: 149 IHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEP 208 I L L+L + + G + +++ ++ E+QVAQ I + + A P +E Sbjct: 221 IQNLSLHLALGIKRLREGFEIKELGIEQEVSDRV-EYQVAQRIVQRIEVIADVSFPQEEI 279 Query: 209 LFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLA 268 ++ L ++ + +++ + +KRL FR ++ L + L HL+ Sbjct: 280 AYLTLHLMAKSNHRENKNDQELSKEVVKVLKRLSQEFR----FSLIEDHQLFNGLLDHLS 335 Query: 269 QALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGA 328 + R I I+N L EE + P++ + + + ++++E +A+ A Sbjct: 336 PMMIRLSRGIRIENPLTEEIKKENPKVFEAVKTHFSNMPALKNYTINEDEWAYLALHLMA 395 Query: 329 WLMQENDLHEKQ--IILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAP--R 384 L +E H+ II TG S AQ+ + R ++ NI ++VK + + + Sbjct: 396 ALEKERAAHKLHALIICATGYGS---AQLLKN-RVISEFGKNITVVNVKGYYEINETTLK 451 Query: 385 GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 G LII+ + F P+++ + L +IRK++ Sbjct: 452 GIDLIISSIDLSTMFFKIPVLHVSIFLNEDDVHKIRKVI 490 >UniRef50_C2FLI0 BglG family transcriptional antiterminator n=2 Tax=Lactobacillus plantarum RepID=C2FLI0_LACPL Length = 707 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 83/378 (21%), Positives = 151/378 (39%), Gaps = 57/378 (15%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 RR +LL LF T++ + GV + D+S +E L +++ L DG + Sbjct: 99 RRNILLLALFVGERDITISQLMNITGVARNTVISDLSRVRKE-LGENRIELVGTKDG-HS 156 Query: 76 VEGTVLNQR----------LCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + G L R + + W+++ ++ SF + T L Sbjct: 157 LRGQELTIRNYFQVHFTALIDGYDWVQK-YQADNSFFAGKDTVGL--------------- 200 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAG-ITPQ----FNPLQRRWAE 180 +T L ++L R+ ++ F I + Y + L + +G PQ N RR Sbjct: 201 NTMLNDWMHLVERQSERAFSDDAIRMIEFYYAFVLKRILSGCFIPQDTFPSNIDDRRELR 260 Query: 181 SCLEF--------QVAQEIGRHWQRRALQPVPPDEPLFMA--LLFSMLRVPDPLRDAHQR 230 + EF QV E+G H E L++ LL L +P + + Sbjct: 261 NKKEFGLASNLLAQVGVEVGSH----------DSEALYLESLLLSGQLHSVEPDERDNVK 310 Query: 231 DRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFAR 290 + + +I+ +V F+++ FYD + L +LY HL R + + + + Sbjct: 311 TKVYKAAIE-VVESFQQITGFSFYDRRQLTSELYVHLLSTYYRVKYHRQYRDGMVKAIEE 369 Query: 291 LYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDS 349 YP + T ++ FE L++ E L+A+ FG+ + Q E+ L ++ TG + Sbjct: 370 NYPDIYTYTELSIRPFEKLNNYPLNENELSLIAIYFGSQMYQDESHLGSALLVCSTGLGT 429 Query: 350 ER--EAQIEQQLRELTLL 365 R + Q+E + L + Sbjct: 430 SRMLKVQLESAFKGLKFV 447 >UniRef50_Q5WJ14 BglG family transcriptional antiterminator n=2 Tax=Bacilli RepID=Q5WJ14_BACSK Length = 678 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 15/234 (6%) Query: 178 WAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS 237 + E +E Q A G+ E F++L+ + ++++ + L Q Sbjct: 238 YQEHIIERQNAFLAGKEMAETFFGKEAVSEQYFVSLMLLI-----SMQESKYENALLEQL 292 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 +R++ F + + + + L LY HL A R F I + N L YP L Sbjct: 293 AERIIEEFERVTLLPLENRETLKKSLYDHLVPAFFRISFKIPLVNPLINRIKEEYPELFE 352 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIE 356 + ALA G +S+EE G + FG +L ++ H +++ N ++ Sbjct: 353 FVKIALAPLSMWTGQVISEEEIGYFTLHFGGYLEKDKRNHSTVNGLIVCSNGVSSSLMLK 412 Query: 357 QQLRELTLLPLNIKHMSVKAFLQ-TGAPRGAALII-----APYTMPLPLFSPPL 404 QL+E + P NI ++V + Q T P+ + +I P T P+ L P L Sbjct: 413 AQLKE--MFP-NIHFLNVHSIDQMTEIPKSSYDLIFSTVRVPSTKPVYLVKPLL 463 >UniRef50_A5Z559 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z559_9FIRM Length = 398 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 3/129 (2%) Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 K LV F ++ V+F D+ L LY HL ++ R + I + N + E+ R Y L Sbjct: 17 KALVAEFEKVACVKFEDKDDLEKALYYHLNTSMYRFQYGIQVGNPMLEDVVREYSELFDL 76 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQ 357 T+ E + G+ + + E + + FGA L +E + +EK +++++ N I+ Sbjct: 77 TKIVCHYLEQQIGLPVPEGEVAYLTLHFGAHLKKEEEQNEKIRVLIVCTNGISSGNMIKH 136 Query: 358 QLRELTLLP 366 +L L +LP Sbjct: 137 EL--LKMLP 143 >UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFF6_9BACI Length = 643 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 119/289 (41%), Gaps = 26/289 (8%) Query: 145 ESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVP 204 + R + F+ + L L HH + + + E +A EI Q++ +P Sbjct: 200 QERLMEFIIIMLDRLLKNHHLEAIEE----KHKKLIGTQEHGIALEIVEAIQKQLPIEIP 255 Query: 205 PDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDE-----QGL 259 E LF+ + + R P R D + ++RL+ L V F E + Sbjct: 256 EAEALFITIPIAGRRTPTNNRTLA--DIAITDDVRRLLEQI--LEQVGFKKEIIEQNESF 311 Query: 260 CDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEES 319 L HL LNR +F + + N L YP + + ES YG+ + ++E Sbjct: 312 FQDLLYHLTFMLNRLIFGLRLKNALLANVKEKYPVAYKMAEISGQVIESRYGLEVPEDEL 371 Query: 320 GLVAVIFGAWLMQENDLHEKQ-----IILLTGNDSER--EAQIEQQLRELTLLPLNIKHM 372 G +A FG ++ Q +D+ K+ ++ TG + + Q+E+ L + T + L + Sbjct: 372 GYLAFYFGVFIGQ-SDIKVKRFQKAAVVCGTGRGTAKLVSIQLERILNQDTEINLFAEKD 430 Query: 373 SVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 +VK L + L+ + +P +P ++ ++ + + +I K Sbjct: 431 AVKEVLDS-----YDLVFSTVKLPFETHAPFIMINEIFDESRVKREIEK 474 >UniRef50_O31644 Putative phosphotransferase enzyme IIA component n=19 Tax=Bacillaceae RepID=MANR_BACSU Length = 648 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 55/310 (17%) Query: 57 EILRYHQLTLTTGYDGSYRVEGTVLNQRLCL--FHWLRRGFRLCPSFITSQF-------- 106 E L+ LTL + +VEG N+R L L FI S+F Sbjct: 137 EWLKRFDLTLVSRQRLGLKVEGNERNKRKALARISDLIHNTAFTSQFIKSKFLHYEVDFV 196 Query: 107 TPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAG 166 T +KS K+ + F D+T FES +H L + + + Q + Sbjct: 197 TKEIKSLQKKHSLY--FTDET----------------FESLLLHTLLMVRRIKMKQPISL 238 Query: 167 ITPQFNPLQRR----WAESCLEFQVAQEIGRHWQRRALQPV-----PPDEPLFMALLFSM 217 + ++++ W +CL QR L+PV P +E +++ L Sbjct: 239 SPKEMAAVKKKKEYQWTFACL------------QR--LEPVFAIRFPEEEAVYLTLHILG 284 Query: 218 LRVPDPLR-DAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLF 276 +V PL+ + + + L + + L+N EL + F+ +Q L + L HL L R + Sbjct: 285 GKVRYPLQTEENLENAVLPKVVGHLINRVSELKMMDFHKDQDLINGLNIHLNTVLQRLSY 344 Query: 277 AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL--MQ-E 333 + + N + + ++YP L L + +H+ +EE+ + + F A + MQ Sbjct: 345 DLSVANPMLNDIKKMYPYLFHLIIDVLEDINQTFDLHIPEEEAAYLTLHFQAAIERMQGS 404 Query: 334 NDLHEKQIIL 343 ++ H+K +I+ Sbjct: 405 SETHKKAVIV 414 >UniRef50_Q899A8 Transcriptional regulatory protein n=3 Tax=Clostridium RepID=Q899A8_CLOTE Length = 650 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/173 (20%), Positives = 80/173 (46%), Gaps = 6/173 (3%) Query: 178 WAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLF----SMLRVPDPLRDAHQRDRQ 233 + E+ A+ +R +P E +++++ F + + D + + + Sbjct: 197 YISETFEYDEAKNYCNELSKRYNIIIPKTEIIWISMHFLGANPIKFLEDDIFSNIKERHK 256 Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 L SI+++V+ F + ++ ++ + + L+ HL A+NR+ ++I I N+ E+ Y Sbjct: 257 LVNSIEKMVSQFEKEVDIALENKDEIINGLFVHLMPAINRAKYSIKIKNSYKEDIKNSYN 316 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILL 344 T + +E+ V L +E V + F A + + N + +K+II++ Sbjct: 317 EFYTITANLVRIINNEFNVELGSDEISYVCLHFVAAIEKMNKSYATKKRIIVV 369 >UniRef50_A8FDW3 PTS family L-ascorbate (L-asc) porter component IIA n=2 Tax=Bacillus pumilus RepID=A8FDW3_BACP2 Length = 678 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/246 (19%), Positives = 102/246 (41%), Gaps = 19/246 (7%) Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 ++ +E G H V DE F++ L+ + + + +R ++++ F Sbjct: 248 RIQKETGLH--------VHDDEIYFLSTLWLSAKKQKLPSSQNPEEHLIRTIARQMIFDF 299 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + F + + L L HL A R ++ I I+N L E + P + T+ + Sbjct: 300 QRYACISFEEYEALEQNLTMHLIPAYYRLIYHIDINNELTESIKKTQPEVFDITQKVVCH 359 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLRELT 363 E +S+ E VA+ FG W+ +E + + + + ++ G ++ QL EL Sbjct: 360 LEKATCSKISEHEMAYVAMHFGGWMRREGISPIVRRSVYIVCGEGIGTSHMLKTQLIEL- 418 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPY---TMPLPLFSPPLIYTDLTLTTHQQEQIR 420 I ++ V+ L + + I + T P+ P+ LT+++++ + Sbjct: 419 -----IGYIEVRDLLSKRSYEEMSSIDVDFVVSTTPISFKGKPVHLVHPILTSYEKKTLL 473 Query: 421 KMLESA 426 + E A Sbjct: 474 QYGEGA 479 >UniRef50_C9AU45 BglG family transcriptional antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9AU45_ENTCA Length = 688 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 2/127 (1%) Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 ++R+V F L +RF D+ + QLY+H R LF + I N + E+ Y L + Sbjct: 287 VERIVERFELLSGIRFKDKHSVIKQLYSHFRPTYFRMLFRLPIINPMQEKIFEKYNDLYQ 346 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWL--MQENDLHEKQIILLTGNDSEREAQI 355 + L + L DEE + + F + +E + +K +++ N A I Sbjct: 347 IVKETLRPISDSFDSKLPDEEVAFLTMHFALLIRNSEEYMVQQKVGVVVCPNGIGSSAII 406 Query: 356 EQQLREL 362 +L+E+ Sbjct: 407 YNELKEI 413 >UniRef50_C0ES87 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES87_9FIRM Length = 634 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 16/204 (7%) Query: 141 QKRFESRDIHFLCLYLQYCLLQHHAGITPQ--FNPLQRRWAESCLEFQVAQEIGRHWQRR 198 QK FE +++ L L H P+ +N + R F E+ + Sbjct: 199 QKMFE----NYMTLMFDRFLTGHVITRMPEKYYNLVSRN------SFSFVDELIDDISKE 248 Query: 199 ALQPVPPDEPLFMALLFSMLRVPDPLRDAH--QRDRQLRQSIKRLVNHFRELGNVRFYDE 256 +P +E +F+ L +R P ++ + + D ++R ++++V R+ N+ D Sbjct: 249 FYIEIPIEEKIFVFLPIIGMRTPADSKNMYSIELDEKIRPLLQKIVEQIRQELNISI-DT 307 Query: 257 QGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSD 316 ++ H+ +NR + + IDN + E+ YP + A + + V ++ Sbjct: 308 HEFTEKFMYHIMFMINRLRYNVHIDNPMFEDIHYKYPLAFKMAEIAARVIKEDAEVVVTQ 367 Query: 317 EESGLVAVIFGAWLMQENDLHEKQ 340 E G +A FG +L + N L++KQ Sbjct: 368 AEMGYLAAYFGVFL-EVNTLNQKQ 390 >UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR family n=3 Tax=Thermoanaerobacter RepID=C6PFK2_9THEO Length = 651 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/152 (19%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQ------- 236 E+++A+++ ++ ++R V E ++ + ++ + + + L++ Sbjct: 248 EWEIAKDLAKNIEKRFNVVVDDTEIGYITMHLMGAKLQNDIETEKFSENYLKRLDCKLYI 307 Query: 237 SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 +K +VN E+ +FY+++ L L+ HL +NR + +DN EE + Sbjct: 308 ILKSIVNDIAEMTGYKFYNDKKLLVGLFLHLKPTINRLKNGVKLDNPFLEEIKKECGIAF 367 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGA 328 + + + Y ++++++E G VA+ FGA Sbjct: 368 EISISFWEKLKEFYKINVNEDEIGYVAIHFGA 399 >UniRef50_D2EIK0 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIK0_PEDAC Length = 700 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 51/100 (51%) Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 L++ K +V++F++L + +E L + LYTHL R + + L + Y Sbjct: 305 LKKVTKEIVDNFKKLSGMNSNNESQLLNDLYTHLVSTFYRVKYNHQYRDGLVTQIKGKYF 364 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQE 333 + T+ +L FE HL++ E L+A+ FG+ ++++ Sbjct: 365 NVYTYTKMSLQPFEKLNVGHLNENEISLIAIYFGSQMVRQ 404 >UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETM8_9FIRM Length = 711 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 14/195 (7%) Query: 121 RNFYDDTNLQALVNL------CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQF-NP 173 RNF ++ + + + + C ++L + L +Y C+ + G +F Sbjct: 194 RNFINEIDGEVMAEVNHILGGCQKQLGMQLSDNGYLHLLVYTSLCVQRMQKG---RFIKE 250 Query: 174 LQRRWAESCL--EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRD-AHQ 229 L++ +AE + E+ V++ I + ++ + DE ++MA+ S R+ P RD Sbjct: 251 LKQSYAEISIQPEYAVSEYIMKELRQFFHLSISVDETIYMAVFISGQRIWPSGSRDLTDI 310 Query: 230 RDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFA 289 ++ + Q ++ E+ ++ F + L +L H+ + R I ++N L +EF Sbjct: 311 KNLDVHQITLSIIKKVNEILHINFMRDSRLLTELSGHIQPTIARLRAGIPVENPLLKEFQ 370 Query: 290 RLYPRLVRTTRAALA 304 YP + + L+ Sbjct: 371 ESYPSVYKACEEGLS 385 >UniRef50_C5BEV1 Putative uncharacterized protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5BEV1_EDWI9 Length = 52 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%) Query: 292 YPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEND 335 +PR++ R A+AG E Y + S EE L+AV G WLMQ +D Sbjct: 6 HPRIIGAPRRAIAGLERRYHIRFSPEELNLIAVSTGTWLMQADD 49 >UniRef50_C9A0D6 BglG family transcriptional antiterminator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A0D6_ENTGA Length = 698 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 3/108 (2%) Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 + + ++R++ F L +RF D+Q + +QLY+H A R F + I N L ++ Y Sbjct: 293 IHELVERIIKRFELLSGIRFKDKQKVINQLYSHFRPAYYRLFFQLPIINPLHKKIIEEYE 352 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQI 341 L + + L + + + ++E + + F + + ND E Q+ Sbjct: 353 DLYQIVQETLRPIGNLFERGIPEDEVSFLTIHFASLI---NDFDEYQV 397 >UniRef50_C6IZU2 PRD domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZU2_9BACL Length = 707 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Query: 204 PPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQL 263 PP+E +M LFS + P + Q D +L ++ RL + + + F +++ L L Sbjct: 288 PPEEIAYMNGLFSRAKEASP--ELVQADMELVDTVYRLTENVVKRTGIPFQEDRLLRSGL 345 Query: 264 YTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVA 323 H+ A R I N L + Y L R A+ ES G+ + DEE G + Sbjct: 346 LEHMGPAFKRIREGSRIRNPLLGAIRKDYDELFGIVREAMN--ESVAGLEIPDEEIGFLV 403 Query: 324 VIFGAWLMQENDL 336 + FGA + + N L Sbjct: 404 MHFGASMERLNQL 416 >UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Clostridium difficile RepID=C9XLJ8_CLODC Length = 679 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 65/293 (22%), Positives = 123/293 (41%), Gaps = 50/293 (17%) Query: 57 EILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSE--- 113 ++L + L L + ++ G L+ RL + + L + R F S++ +K E Sbjct: 161 KVLASYNLNLIKKQNTGMKLNGNELDIRLFILNQLYKNSR--KDFSNSKYFKGIKKEEII 218 Query: 114 -LKRRGIA----RNFY-DDTNLQALVN----LCSR-RLQKRFESRDIHFLCLYLQYCLLQ 162 L+ + + NFY D L+ ++N L R + +K+ + D+ F L Sbjct: 219 NLEEKLLTLFKENNFYVTDEMLREVINYIVVLVYRVKEEKKVKDYDVKFDLL-------- 270 Query: 163 HHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD 222 +S E+ +A+EI +H + DE + + L ++ Sbjct: 271 -----------------KSYDEYFIAREI-KHIISGMFECTLNDEEI-IYLTIPLVSGNA 311 Query: 223 PLRDAHQRDRQLRQSIKRLVNH-----FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFA 277 P + ++ ++I L+ + + ++G F +E L L HL+ LNR LF Sbjct: 312 PASECALNSSRISKNIDELMENIFNQIYVDMG--IFINEDELRVGLGYHLSFTLNRLLFN 369 Query: 278 IGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL 330 I + N L EE + Y + + A E +Y + +S++E G +A+ F +L Sbjct: 370 IKLKNVLLEEIKQNYILPFKLAQIAGKVIEKKYNLEVSEDEIGYIAIHFSGYL 422 >UniRef50_Q8NYI2 MW0220 protein n=49 Tax=Staphylococcus aureus RepID=Q8NYI2_STAAW Length = 698 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 89/428 (20%), Positives = 164/428 (38%), Gaps = 52/428 (12%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + S RR ++L LF ++ FS V + DI+ +E L H L+L Sbjct: 87 IFSIETRRYYLMLMLFSKENAMSLNHFSIDLQVSKNTVIHDINHV-KEQLENHGLSLKYS 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 Y + G R + + RL S+ AL L+ ++ Sbjct: 146 RKHGYEIVGDEFEVRRFFIKLIDQ--RLNHDITKSEVLKALNLTLEDIAYQKD------- 196 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQ--RRWAESCLEFQV 187 + + L+ RF + + L L C+++ NPL ++ E+Q Sbjct: 197 --KIKQVEQFLKSRFIDKSLSSLPYVL--CVIRRRIQSGHVMNPLNINYQYLRDTKEYQA 252 Query: 188 AQEIGRHWQRRALQP-VPPDEPLFMALLFSMLRVPDPLRDAHQRDR--QLRQSIKRLVNH 244 + + + L+P +P E L++ L +L D + D L +I ++++H Sbjct: 253 TEIMTQ------LEPDLPEAEKLYLTL--HLLSTSVQWTDLQESDNISNLTMAIAQMIHH 304 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F ++ + D++ L QL HL A R + + + L Y L + + Sbjct: 305 FEQITFINIEDKEKLSQQLLLHLTPAFYRIKYNLTDRDELINPLQGNYQSLFHMVKQSCQ 364 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQEN---DLHEKQIILLTGNDSEREAQIEQQLRE 361 +G L D E + ++FG L +++ D K II+ T S + + +LR Sbjct: 365 SLTEYFGKSLPDNEIAYLTMLFGGSLRRQDENFDGKIKAIIVCTQGTSVSQMML-YELRN 423 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPL-FSP-------PLIYTDLTLTT 413 L + + +S++ F YT+ + FSP L T + L+ Sbjct: 424 LFPEIIFLDAISLRTF-------------ENYTLDYDIVFSPMFVLTHKKLFITKVALSE 470 Query: 414 HQQEQIRK 421 ++Q ++RK Sbjct: 471 NEQRKLRK 478 >UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N6K6_9FIRM Length = 644 Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 83/215 (38%), Gaps = 3/215 (1%) Query: 214 LFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNR 273 ++S L L D D ++++ ++ L+N+ N +++ L L+ H LN Sbjct: 277 IYSHLVANTQLNDLVDNDNKIKELVEELLNNIYFDYNFDLRNDEILSHDLFLHFKSILNT 336 Query: 274 SLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQ- 332 FA+ N L +P T A ++ L+++E G V++ GA + + Sbjct: 337 KSFALNKRNPLLNTIKTNFPLAFDITLTCTAKIFNKPPYILTEDEVGYVSLHIGAAIERC 396 Query: 333 -ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI-KHMSVKAFLQTGAPRGAALII 390 L K +IL+ G+ +E +L + I + S F+ + Sbjct: 397 FSGSLQNKSVILVCGSGQATTRMLEARLNVFFKDKITIVRKASYNEFINYTKRELLNIDF 456 Query: 391 APYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 T+PL P I D L E I K L S Sbjct: 457 VISTIPLKSEHIPTITVDFALNNQDIEAISKFLTS 491 >UniRef50_C9AYJ5 Transcriptional antiterminator n=4 Tax=Enterococcus RepID=C9AYJ5_ENTCA Length = 679 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%) Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 ++++ L + F D + L + HL A R + ++N L EE Y L T Sbjct: 290 KIIHEMERLAAIEFVDYRTLLMNTFYHLVPAYFRIRYGFPLENVLIEEIKLQYNELFELT 349 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN 334 R AL E G + DEE G ++FG + ++ Sbjct: 350 RRALGSLEDLVGT-IPDEEIGYFTILFGGEISKQK 383 >UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9W1_9FIRM Length = 515 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 3/113 (2%) Query: 212 ALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQAL 271 L S+ D +D + R+L L+ + + N F+++ L LY HL A+ Sbjct: 290 VFLISLQSSSDTAKDEQEEARELSD---LLIAEWEKHLNYSFHEDTELKSALYAHLCPAI 346 Query: 272 NRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAV 324 R I I+N L E LY +A+ Y +SDEE G A+ Sbjct: 347 TRFRHGISIENPLMYEIKTLYKNTFSIAKASAHILTERYQAPISDEEIGYFAL 399 >UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6G9_9CLOT Length = 673 Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 233 QLRQSIKRLVNH-FRELGNVR---FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEF 288 QLR++I L+ F+E+ +R +Q L D L HL LNR LF I + N L E+ Sbjct: 314 QLRENISDLMEKIFKEIY-IRMGIIISDQTLRDNLGYHLEFTLNRLLFNIKLKNLLLEDM 372 Query: 289 ARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQE---NDLHEKQIILLT 345 Y + + E+ Y + + ++E G +A+ FG++L + N L + I+ T Sbjct: 373 KENYVLPYNLAKISADVIENVYNLVMPEDEIGYIAIHFGSYLEKNIISNTLQKVAIVCST 432 Query: 346 G 346 G Sbjct: 433 G 433 >UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLZ0_CLODC Length = 661 Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%) Query: 233 QLRQSIKRLVNHFR----ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEF 288 ++ S+K +V+ E + F +++ L + L HL ALNR F I + N L +E Sbjct: 299 KINDSVKEVVDEVTSFLLETSGIDFKEDKKLIENLEYHLYFALNRMRFNIRVKNPLLQEI 358 Query: 289 ARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL 330 Y + A E ++ + + D E G +A+ FG++ Sbjct: 359 KERYTFPYSVAKIAAMIIEEKFDLKICDHEIGYIALHFGSYF 400 >UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Enterobacteriaceae RepID=D2C0F0_DICD5 Length = 279 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 32/61 (52%) Query: 263 LYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLV 322 L HL A+ RS I I N L E R YP+ R A+A +YG+ L +EESG + Sbjct: 97 LADHLTFAIERSRKGIVIQNRLLPEVRRFYPQQFRVASEAVAIIRQQYGIELPEEESGNI 156 Query: 323 A 323 A Sbjct: 157 A 157 >UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MET8_9FIRM Length = 671 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 45/100 (45%) Query: 231 DRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFAR 290 D + ++ I+ ++N R + D+ L + L HL+ AL R F + I N + Sbjct: 313 DYEYKEEIEDILNTIRSGTGIDLSDDNQLINGLAMHLSAALQRLRFDMNIRNEFLDSIKN 372 Query: 291 LYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL 330 LYP A E ++ + + E G +A+ FGA L Sbjct: 373 LYPLAFELAVVAGEVIEKKHKLKAKESEIGFLAMHFGAAL 412 >UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=Clostridium difficile RepID=C9XMT3_CLODC Length = 642 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 4/169 (2%) Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 ++ L D L H LN + + N L YP T A+ L Sbjct: 320 NDSVLFDDLVLHFKSILNSKSYNLNKVNPLINTIKSNYPLAFEITLNAIEKVFKNSIYSL 379 Query: 315 SDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 +++E G V++ GA + + +N++ K ++L+ G+ +E QL ++ +NI + Sbjct: 380 TEDEIGYVSLHIGAGIERFFQNNIKCKNVVLVCGSGYGSSRLLEVQLNKVFHDKINI--L 437 Query: 373 SVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 +F Q A + + I T+PL S P++ DL L E I K Sbjct: 438 QCLSFNQFLASELSDVDIIISTIPLNHDSIPIVLVDLKLLKKDIENISK 486 >UniRef50_UPI0001BC63E8 transcriptional regulatory protein n=3 Tax=Fusobacterium RepID=UPI0001BC63E8 Length = 661 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 3/117 (2%) Query: 217 MLRVPDPLRDAHQRDR---QLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNR 273 +LR+ ++ R R ++ + RL+ F L V+ + L D + ++ + R Sbjct: 271 LLRISCDEKEIFARHRNWIEIELGVYRLIKEFEHLKKVQLVKNKKLLDDILYYIKPLIYR 330 Query: 274 SLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL 330 S I + NT+ +E +Y + A FE+ G+ +SD E G + IF L Sbjct: 331 SSKQIELKNTVLKEVKSIYGDTFYYLKKAFQSFETLLGLEVSDNEIGFLVPIFQVAL 387 >UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing protein n=3 Tax=Enterococcus faecalis RepID=C7UBV6_ENTFA Length = 652 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 DE+ + LY HL + RS + + N L EE R Y L TT LAG E E + L Sbjct: 329 DEKLYMNILY-HLVSMIYRSKLNVPVSNPLLEEIKREYSVLYSTTWLILAGIEKELDIRL 387 Query: 315 SDEESGLVAVIF-GA 328 +D+E + + F GA Sbjct: 388 TDDEVAFMMIHFQGA 402 >UniRef50_C5J5A2 PRD activator n=16 Tax=Enterobacteriaceae RepID=C5J5A2_ECOLX Length = 517 Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 20/234 (8%) Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFM-ALLFSMLRVPDPLRDAH-----QRDRQLRQSI 238 F VA ++ ++R +P DE F+ + S D +D Q + R Sbjct: 262 FNVASQMIHKIEQRIAHTLPDDEVWFIYQYIISSGVAIDGQKDVSIISHMQASNEARLIT 321 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 RL+ F ++ + F ++ L D L H+ +NR + I I N L E+ + R Sbjct: 322 WRLITVFSDIVDCDFSEDSALYDGLLVHIKPLINRLNYRIHIRNPLLEDIKAELADVWRL 381 Query: 299 TRAALAGFESEYGVH-LSDEESGLVAVIFGAWLMQENDLHEKQIILL----TGNDSEREA 353 T+ + +G + +S++E G + V F A + E + K+++L+ G ++ Sbjct: 382 TQYVVNQVFKTWGENAVSEDEVGYLTVHFQAAM--ERQIARKRVLLVCSTGIGTSHLLKS 439 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYT 407 +I + E T++ + A L P LII+ T+ LP + P+ Y Sbjct: 440 RILRAFPEWTIVDV-----ISAANLSQVLPDNIELIIS--TINLPTVTMPVAYV 486 >UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZWZ8_ENTGA Length = 640 Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust. Identities = 48/222 (21%), Positives = 91/222 (40%), Gaps = 24/222 (10%) Query: 214 LFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNR 273 L LR + D ++QL+Q+I++ + + +F +Q L + L H+A L R Sbjct: 270 LHEQLRGKFSVLDDRTSNQQLKQAIEKTLELVDLRYHTQFRTDQELGNALLMHVAPLLQR 329 Query: 274 SLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQE 333 +DN + ++ Y + ++ + +S +E G VA+ F A L ++ Sbjct: 330 LYTGHQLDNPIIDDIYTQYANVFNVAMVFISELNKDLDADISKDEIGYVAIYFAASLEKQ 389 Query: 334 -----NDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGA------ 382 +D + +I TG + LL +N++ + A + T A Sbjct: 390 ANQLIDDYKKIAVICSTGGGAS------------YLLKVNLERLFSNAEVTTFALNEVDQ 437 Query: 383 -PRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + L+I+ + F+ P+IYT L + +I K L Sbjct: 438 IDKSFDLLISTVPLDQEQFAIPIIYTKTILNRAEINKIEKDL 479 >UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQV6_ALIAD Length = 674 Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%) Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 R V ++ + F + L L HLA AL+R + I N L E YP L Sbjct: 320 RFVRAVEDITRLPFASDHLLVSGLAQHLAPALDRVRAGLPIRNPLLETVKARYPELFAAA 379 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ----IILLTGNDSER--EA 353 +A + +G+ L DEE G +A+ GA +E L E++ I+ G S R + Sbjct: 380 ESASREVFAPHGLRLPDEEIGFLAMHLGA--SRERRLAEEKWRAVIVCPHGLSSARLLAS 437 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 ++ ++L E+++ + A ++ A A L+++ T+ LP P++ LT Sbjct: 438 RVRKELPEISVQEV--------ASAKSAAHLNADLVLS--TVSLPEADVPVVVVSPFLTE 487 Query: 414 HQQEQIRKML 423 +R +L Sbjct: 488 EDLRAVRFVL 497 >UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U731_9LACT Length = 641 Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust. Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 16/250 (6%) Query: 184 EFQVAQEIGRHWQRRALQPVPPDE--PLFMALLFS--MLRVPDPLRDAHQRDRQLRQSIK 239 E+ A+ I + + + +P +E +++ LL ML D L + + I+ Sbjct: 250 EYYCAKAIAKEIEAKINLTIPENEIANIYLHLLGQKRMLVSEDTLESRLETPES--ELIE 307 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 R++ E+ + F + L + L HL AL+R + I+N L EE YP ++ Sbjct: 308 RVIVEINEMYQLDFRQDVILKNGLLLHLESALHRIRLNMPINNELIEEIKNNYPFPMQLA 367 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ-----IILLTGNDSEREAQ 354 + + E+ + + + E G + + F L + N + + ++ TG + Sbjct: 368 KILASSLETNFNIKIDINEVGFLTLHFCGALERANSIQSNKEIRAVVVCTTGLGT--SVL 425 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLP-LFSPPLIYTDLTLTT 413 ++ +L+ T LNIK + V A Q + I T+PL +S P + ++ Sbjct: 426 LKAKLQSKT--NLNIKVVGVYALYQLDDIEFTDIDIIISTVPLSKKYSIPDVVITPIVSN 483 Query: 414 HQQEQIRKML 423 + E+I + + Sbjct: 484 NDIEKIHEFI 493 >UniRef50_Q7X1P0 Putative transcriptional regulator n=1 Tax=Lactococcus raffinolactis RepID=Q7X1P0_9LACT Length = 608 Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 33/78 (42%) Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F + D +Y HL A R L I N L E+ + Y L + T +L E Sbjct: 230 IEFKAFNNVVDHIYAHLVPAYFRILGKFTIQNVLIEQIQKQYNHLFQITHYSLTPLEELL 289 Query: 311 GVHLSDEESGLVAVIFGA 328 G L D E G ++FG Sbjct: 290 GERLPDSEIGYFTILFGG 307 >UniRef50_D2ELR0 BglG family transcriptional antiterminator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR0_PEDAC Length = 508 Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust. Identities = 37/173 (21%), Positives = 79/173 (45%), Gaps = 11/173 (6%) Query: 258 GLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG-FESEYGVHLSD 316 G+ + L H+ R + I I N + E+ YP + ++T A+ F Y ++SD Sbjct: 326 GIEEDLSLHVEPMFKRIINGIEIKNPILEDIKLEYPNIFQSTEIAMKKIFREYYSSNVSD 385 Query: 317 EESGLVAVIFGAWLMQENDLHEKQIILLT---GNDSEREAQIEQQLRELTLLPLNIKHMS 373 +E G VA I+ A ++++ + K +I+ + G + +IE++L L + + +S Sbjct: 386 DEIGFVA-IYIAKFIEQHGHNMKALIMCSSGIGTSELLKVKIEKELPNLVIEDV----IS 440 Query: 374 VKAFLQTGAP--RGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + + + R LI+ + P++ + T + ++ K++E Sbjct: 441 FRMYEKNKEKWNRKVDLILTTIATNEKVVDKPIVLVNAMFTKIDKIRVEKLIE 493 >UniRef50_C9KLV3 Putative multidomain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLV3_9FIRM Length = 703 Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 241 LVNHFRELGNVRFYDEQG-LCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 L + F L + EQ L D+L HL A +R I N + + + Y L T Sbjct: 304 LASRFASLSGLDITQEQKVLVDRLTVHLISAYHRLQNGIRYHNPMLSKIKQDYQSLFYLT 363 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGN 347 + A+ E + SD+E L+A FG ++Q+ +L ++QI+++ + Sbjct: 364 KTAVKSQEYLWHADFSDDEIALIATYFGGAVVQQTEELQQRQILVVCSS 412 >UniRef50_UPI0001C425D1 mannitol operon transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C425D1 Length = 689 Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust. Identities = 22/100 (22%), Positives = 44/100 (44%) Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 L ++++V F+ + F + + + L H+ A R + I N L + Y Sbjct: 300 LEDVVRKMVIDFQRYACIEFEHFRAVEENLLIHIRPAFYRLKYGISAKNPLTKSIKEKYG 359 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQE 333 + T+ L E G ++D+E+ + + FG W+ +E Sbjct: 360 DVFELTKKVLPHLERFVGAAINDDEAAYITMHFGGWMRKE 399 >UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9A5_9FIRM Length = 705 Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 4/132 (3%) Query: 203 VPPDEPLFMAL-LFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCD 261 +PP+E ++ L L + L DP A + + LR L+ + + L D Sbjct: 314 LPPEEAQYLELYLAAYLGAEDPWGSAQEME--LRNLEAALIREMEKALHTDLSGYTSLRD 371 Query: 262 QLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV-HLSDEESG 320 LY HL L R I +N + YP L + TRAA + ++ + +SD+E+ Sbjct: 372 DLYCHLRPMLLRVEQNIRTENPQLDTIRTAYPGLWKATRAACDAVQQQFVLPAISDDEAA 431 Query: 321 LVAVIFGAWLMQ 332 +A+ FGA L Q Sbjct: 432 YLAMHFGAVLEQ 443 >UniRef50_C6VLN1 Putative uncharacterized protein n=1 Tax=Lactobacillus plantarum JDM1 RepID=C6VLN1_LACPJ Length = 682 Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 108/277 (38%), Gaps = 36/277 (12%) Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGI---A 120 LT+ +G +G+ + GT NQR L L S + +L+ R + Sbjct: 141 LTIISGTNGT-SLTGTERNQRNWFLTVLGENGPLINSALKIDPNTSLEITHFLRTLETDT 199 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 N++ D L L+ S L + + + L Q+ A ++ Q + WA+ Sbjct: 200 GNYFSDDTLTILITFFSWYLNRLLTNH---------SFELKQNDANMSEQVGIINN-WAK 249 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFS---MLRVPDPLRDAHQRDRQLRQS 237 + L H+Q + +E LF+ L + + + AH+ +RQ Sbjct: 250 AFL---------CHYQIYNV-----NEQLFITYLVKSGQFIHINPDNKLAHKLAPIVRQI 295 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 I+R F ++ + E L L THL R + I + Y L+ Sbjct: 296 IRR----FNDVSGSQISVE-SLEVPLLTHLLSTYYRVKYQITFKQPSLSIIMKQYNELIF 350 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN 334 TR +L FE LSDEE LVA+ FG L +EN Sbjct: 351 FTRLSLKPFEDLIDQRLSDEEVTLVAIYFGGILRKEN 387 >UniRef50_C3W9R0 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3W9R0_FUSMR Length = 663 Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust. Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 10/187 (5%) Query: 233 QLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLY 292 + I +++ F L + +++ L +L HL L R+L I + N++ E Y Sbjct: 287 NIEMEIYKIILDFSNLKKINLTEDKILHQELLNHLKPLLYRALKNINLGNSILREIKHNY 346 Query: 293 PRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSER 351 + GFE + +S++E V ++F + + E + K I ++ Sbjct: 347 NNSFEICKNIFIGFEKNTSIKISEDEIAFVVLLFERAIQRIEKNKTIKNIAIVCNFGIST 406 Query: 352 EAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPY-------TMPLPLFSPPL 404 + ++ +L+EL + NI+ S++ + Q + LII +P+ SP L Sbjct: 407 SSFLKMRLKELFKIN-NIQTYSLQEY-QNNLNKIPDLIITTIDLEERDDKIPIVKVSPIL 464 Query: 405 IYTDLTL 411 TD+ + Sbjct: 465 TKTDIEI 471 >UniRef50_A8RAP2 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAP2_9FIRM Length = 682 Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 5/117 (4%) Query: 216 SMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSL 275 S L+V D + D QL + + L + F L ++ D+ GL + LY H + Sbjct: 272 STLKVKDD-----ESDIQLFELAQHLCDVFERLAYIQLVDKNGLINSLYIHFKLTMYYYR 326 Query: 276 FAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQ 332 +I + N L EE Y L + SE+ + D E + + FG L Q Sbjct: 327 LSIQVVNPLIEEVKENYSDLYQLVSEICKDLSSEFPFPVLDSEIVYITMHFGGHLRQ 383 >UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JT03_LACRH Length = 598 Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 5/186 (2%) Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 + I L+ E N+ + L L HL Q + R + N L + + YP Sbjct: 263 FERKIHALIETVSEKINLNLTKDVQLEGDLSLHLYQMVLRLQADTTVINPLLSDIKKNYP 322 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREA 353 L AL F +E + +SD+E V + F A + E ++I+ + N A Sbjct: 323 SLFGIVWYALVDFATENHLTISDDEISFVTIHFQAAI--ERSKKRRRILFVCLNGIGTSA 380 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 + Q+R++ L +++ + + L ALII+ T+PLP S P+ LT Sbjct: 381 LLSAQMRQI-LPDVSLIQIVSRDALSQQDLSDVALIIS--TIPLPKQSVPIATISPMLTA 437 Query: 414 HQQEQI 419 ++I Sbjct: 438 DDMKKI 443 >UniRef50_C6JLH1 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JLH1_FUSVA Length = 660 Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 46/104 (44%) Query: 227 AHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPE 286 H+ ++ + RL+ F L NV+ + L D + ++ + RS I + N++ + Sbjct: 286 KHRNWLEIELGVYRLIKEFEHLKNVQLVKNKRLMDDILYYIKPLIYRSSKKIELKNSILK 345 Query: 287 EFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL 330 E +Y + A FE+ + +SD E G + IF L Sbjct: 346 EVKLVYEDTFYYLKKAFHSFETLLNLEVSDNEIGFLVPIFEVAL 389 >UniRef50_D1YDT2 PRD domain protein n=4 Tax=Propionibacterium acnes RepID=D1YDT2_PROAC Length = 405 Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 3/121 (2%) Query: 204 PPDEPLFMALLFSMLRVPDPL--RDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCD 261 P +E LF+A+ + +R PD R D ++ + + E+ + D L D Sbjct: 248 PIEEELFLAMSVAGMRTPDSAQGRQLFPADEEVPGLVDAIFERIAEVMQIHL-DADELAD 306 Query: 262 QLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGL 321 + HL LNR F + ID YP R + E G+ +SD E+GL Sbjct: 307 EFAHHLTFMLNRIRFRVTIDEESVRSIRYQYPVAHRMAEISRDVIEERTGMRISDSETGL 366 Query: 322 V 322 + Sbjct: 367 L 367 >UniRef50_B6GAR0 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAR0_9ACTN Length = 188 Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 6/103 (5%) Query: 263 LYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLV 322 L HL AL R+ I I+N L E A +YPR V R + GV+L + E + Sbjct: 4 LADHLQYALERTGDGIAIENPLSHEVAFVYPREVELGRRGIELVSERMGVNLPESEITSI 63 Query: 323 AV------IFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQL 359 A+ + G Q+ DL K ++L E Q+ QQL Sbjct: 64 ALHLVNAEVDGMGSSQDMDLVMKSTVILERATQVIEGQLGQQL 106 >UniRef50_Q1JEW2 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=13 Tax=Streptococcus RepID=Q1JEW2_STRPD Length = 720 Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 2/127 (1%) Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 ++ ++N + D L LY+HL A R + I + N L E+ + Y L Sbjct: 324 MEEIINSVAVNTGLSITDTPELRQNLYSHLLPAYYRLYYDIDLTNPLKEQIKQDYESLFY 383 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTG--NDSEREAQI 355 + +L+ E + G ++++E + FG WL Q++ L+ N + Sbjct: 384 LVKRSLSPLEKQLGKLVNEDEVAYFTIHFGRWLQAPKKRPSNQLVALSVCPNGISSSLML 443 Query: 356 EQQLREL 362 E L+EL Sbjct: 444 EATLKEL 450 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P54901 Stationary phase-inducible protein csiE n=121 Ta... 504 e-141 UniRef50_A8GHY9 Transcriptional antiterminator, BglG n=4 Tax=Ent... 423 e-117 UniRef50_B2VI26 Stationary phase-inducible protein n=7 Tax=Enter... 422 e-116 UniRef50_A4TMW0 RNA-binding protein n=24 Tax=Yersinia RepID=A4TM... 411 e-113 UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR fa... 386 e-106 UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_B... 378 e-103 UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR fa... 360 4e-98 UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 ... 316 8e-85 UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacill... 316 1e-84 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 314 5e-84 UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR fa... 310 6e-83 UniRef50_Q63A16 Possible transcriptional antiterminator, bglG fa... 286 1e-75 UniRef50_A8FDW3 PTS family L-ascorbate (L-asc) porter component ... 284 3e-75 UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotrans... 281 3e-74 UniRef50_D0ZD91 Transcriptional antiterminator n=1 Tax=Edwardsie... 275 2e-72 UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 ... 260 1e-67 UniRef50_C2FLI0 BglG family transcriptional antiterminator n=2 T... 249 1e-64 UniRef50_Q899A8 Transcriptional regulatory protein n=3 Tax=Clost... 233 8e-60 UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR fa... 224 6e-57 UniRef50_O31644 Putative phosphotransferase enzyme IIA component... 221 3e-56 UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Ba... 217 7e-55 UniRef50_Q5WJ14 BglG family transcriptional antiterminator n=2 T... 213 7e-54 UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clo... 206 1e-51 UniRef50_UPI0001C35E6F mannitol operon transcriptional antitermi... 197 7e-49 UniRef50_B9Y618 Putative uncharacterized protein (Fragment) n=1 ... 195 3e-48 UniRef50_C0ES87 Putative uncharacterized protein n=1 Tax=Eubacte... 188 5e-46 UniRef50_C9AU45 BglG family transcriptional antiterminator n=2 T... 181 3e-44 UniRef50_A5Z559 Putative uncharacterized protein n=1 Tax=Eubacte... 161 5e-38 Sequences not found previously or not previously below threshold: UniRef50_UPI0001C425D1 mannitol operon transcriptional antitermi... 233 1e-59 UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Hal... 232 2e-59 UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Cl... 227 8e-58 UniRef50_B8DAY8 Transcriptional antiterminator, BglG n=24 Tax=Li... 226 8e-58 UniRef50_C6J1G7 PTS system IIA 2 domain-containing protein n=2 T... 215 2e-54 UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 ... 210 8e-53 UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=The... 205 3e-51 UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan opero... 204 6e-51 UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR fa... 203 1e-50 UniRef50_Q8NYI2 MW0220 protein n=49 Tax=Staphylococcus aureus Re... 202 2e-50 UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR fa... 202 2e-50 UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus ... 199 1e-49 UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibaci... 198 5e-49 UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B... 194 6e-48 UniRef50_Q65NB6 Putative uncharacterized protein n=1 Tax=Bacillu... 193 8e-48 UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alk... 193 9e-48 UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Cl... 193 1e-47 UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_L... 192 2e-47 UniRef50_C1I943 BglG family transcriptional antiterminator n=1 T... 192 2e-47 UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paeniba... 191 4e-47 UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS sy... 191 5e-47 UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerof... 189 1e-46 UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metab... 188 3e-46 UniRef50_B0MFP8 Putative uncharacterized protein n=1 Tax=Anaeros... 188 5e-46 UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 187 7e-46 UniRef50_B0MFY1 Putative uncharacterized protein n=1 Tax=Anaeros... 187 8e-46 UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=St... 187 8e-46 UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus... 186 1e-45 UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomon... 185 2e-45 UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcu... 185 2e-45 UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus ... 185 3e-45 UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS ... 184 5e-45 UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax... 184 6e-45 UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR fa... 184 7e-45 UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1... 183 9e-45 UniRef50_B0KCW5 Transcriptional antiterminator, BglG n=9 Tax=The... 183 1e-44 UniRef50_Q9KGB4 BH0193 protein n=3 Tax=Bacillus halodurans RepID... 183 1e-44 UniRef50_A8R9X4 Putative uncharacterized protein n=1 Tax=Eubacte... 183 1e-44 UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Stre... 183 2e-44 UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostri... 182 2e-44 UniRef50_C0CS52 Putative uncharacterized protein n=1 Tax=Blautia... 182 3e-44 UniRef50_P46321 Putative phosphotransferase enzyme IIA component... 181 3e-44 UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Ba... 181 3e-44 UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Cl... 181 4e-44 UniRef50_C2DAD7 BglG family transcriptional antiterminator n=2 T... 181 4e-44 UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 T... 181 4e-44 UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostri... 180 1e-43 UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostri... 180 1e-43 UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collins... 179 1e-43 UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 T... 178 3e-43 UniRef50_P96574 Putative phosphotransferase enzyme IIA component... 177 7e-43 UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaeros... 176 1e-42 UniRef50_Q8EMT4 Hypothetical conserved protein n=1 Tax=Oceanobac... 176 1e-42 UniRef50_B8DAX2 PTS system IIA 2 domain protein n=22 Tax=Listeri... 176 2e-42 UniRef50_Q5WCM9 Transcriptional antiterminator n=1 Tax=Bacillus ... 176 2e-42 UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttle... 175 3e-42 UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 T... 174 5e-42 UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostri... 172 2e-41 UniRef50_C9A0D6 BglG family transcriptional antiterminator n=1 T... 172 3e-41 UniRef50_B6G219 Putative uncharacterized protein n=1 Tax=Clostri... 171 4e-41 UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconost... 170 7e-41 UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=... 170 1e-40 UniRef50_D2EIK0 Transcription regulator n=1 Tax=Pediococcus acid... 169 2e-40 UniRef50_B0P1K3 Putative uncharacterized protein n=1 Tax=Clostri... 168 4e-40 UniRef50_A6LQ03 Transcriptional antiterminator, BglG n=3 Tax=Clo... 168 5e-40 UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR fa... 167 7e-40 UniRef50_A8RV91 Putative uncharacterized protein n=1 Tax=Clostri... 167 9e-40 UniRef50_C9XST4 Putative transcription antiterminator n=11 Tax=B... 166 1e-39 UniRef50_D1AHL2 Transcriptional antiterminator, BglG n=1 Tax=Seb... 166 1e-39 UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Cl... 166 2e-39 UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=... 166 2e-39 UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan opero... 165 2e-39 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 165 3e-39 UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) ... 164 4e-39 UniRef50_C9AYJ5 Transcriptional antiterminator n=4 Tax=Enterococ... 164 5e-39 UniRef50_D1ARV2 PTS modulated transcriptional regulator, MtlR fa... 164 7e-39 UniRef50_Q5E1U1 PTS system, mannitol (Cryptic)-specific IIA comp... 163 1e-38 UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Cl... 163 1e-38 UniRef50_C6CCS2 PTS modulated transcriptional regulator, MtlR fa... 162 2e-38 UniRef50_C2JT05 Transcriptional antiterminator n=1 Tax=Lactobaci... 162 2e-38 UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collins... 162 2e-38 UniRef50_B0NYU6 Putative uncharacterized protein n=2 Tax=Clostri... 162 3e-38 UniRef50_C3RLU7 Predicted protein n=2 Tax=Bacteria RepID=C3RLU7_... 161 5e-38 UniRef50_C3WAH3 PRD domain-containing protein n=1 Tax=Fusobacter... 161 5e-38 UniRef50_B6EP62 HTH-type transcriptional regulator n=1 Tax=Aliiv... 161 6e-38 UniRef50_C6JIT2 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 160 9e-38 UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium... 160 1e-37 UniRef50_A6LQT2 Transcriptional antiterminator, BglG n=1 Tax=Clo... 159 1e-37 UniRef50_Q1JEW2 Transcription antiterminator, BglG family / PTS ... 159 1e-37 UniRef50_C2C385 BglG family transcriptional antiterminator n=1 T... 159 1e-37 UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Ali... 159 2e-37 UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Lis... 159 2e-37 UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR fa... 159 2e-37 UniRef50_C6IZU2 PRD domain-containing protein n=1 Tax=Paenibacil... 158 3e-37 UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacte... 158 3e-37 UniRef50_Q8NVE5 MW2083 protein n=56 Tax=Staphylococcus RepID=Q8N... 158 4e-37 UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-... 158 4e-37 UniRef50_Q5WJH1 BglG family transcriptional antiterminator n=1 T... 158 4e-37 UniRef50_B1CBZ7 Putative uncharacterized protein n=1 Tax=Anaerof... 158 5e-37 UniRef50_D1ARA3 PTS modulated transcriptional regulator, MtlR fa... 157 5e-37 UniRef50_C0ZED9 Putative uncharacterized protein n=1 Tax=Breviba... 157 6e-37 UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=... 157 6e-37 UniRef50_A8RAP2 Putative uncharacterized protein n=1 Tax=Eubacte... 157 7e-37 UniRef50_C0X3T6 BglG family transcriptional antiterminator n=22 ... 157 8e-37 UniRef50_A6CNR6 MtlR n=2 Tax=Bacillus RepID=A6CNR6_9BACI 156 1e-36 UniRef50_B4U0A9 Transcriptional antiterminator with PTS regulati... 156 1e-36 UniRef50_B8DCH4 PTS system, IIA 2 domain protein n=15 Tax=Lister... 156 2e-36 UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 ... 156 2e-36 UniRef50_B0MAW6 Putative uncharacterized protein n=1 Tax=Anaeros... 155 2e-36 UniRef50_A4VY33 Transcriptional antiterminator n=33 Tax=Streptoc... 155 2e-36 UniRef50_C2HB07 BglG family transcriptional antiterminator n=12 ... 155 3e-36 UniRef50_C3WG94 Predicted protein n=1 Tax=Fusobacterium mortifer... 155 3e-36 UniRef50_C3WDH7 Predicted protein n=1 Tax=Fusobacterium mortifer... 155 3e-36 UniRef50_C5RM48 Transcriptional antiterminator, BglG n=1 Tax=Clo... 155 3e-36 UniRef50_UPI00017890F3 PTS modulated transcriptional regulator, ... 155 3e-36 UniRef50_A0AFI1 Complete genome n=2 Tax=Listeria RepID=A0AFI1_LISW6 155 3e-36 UniRef50_D1AIW4 PTS modulated transcriptional regulator, MtlR fa... 155 3e-36 UniRef50_A0AFK2 Complete genome n=18 Tax=Listeria RepID=A0AFK2_L... 155 4e-36 UniRef50_B2TIY2 Putative transcription antiterminator n=3 Tax=Cl... 154 4e-36 UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipe... 154 6e-36 UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecali... 154 8e-36 UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteri... 153 9e-36 UniRef50_C6DIT7 Transcriptional antiterminator, BglG n=5 Tax=Pec... 153 9e-36 UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing prot... 153 1e-35 UniRef50_B0P5V1 Putative uncharacterized protein n=1 Tax=Anaerot... 153 1e-35 UniRef50_C5F6Y5 Predicted protein n=2 Tax=Lactobacillus paracase... 152 2e-35 UniRef50_C6JPW9 Predicted protein n=4 Tax=Fusobacterium RepID=C6... 152 2e-35 UniRef50_C5J5A2 PRD activator n=16 Tax=Enterobacteriaceae RepID=... 152 2e-35 UniRef50_Q3XZH6 Transcriptional antiterminator bglG:Phosphoenolp... 152 3e-35 UniRef50_B0MEI2 Putative uncharacterized protein n=1 Tax=Anaeros... 151 4e-35 UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli R... 151 5e-35 UniRef50_D0BM95 Putative uncharacterized protein n=1 Tax=Granuli... 151 5e-35 UniRef50_C7TGH5 Transcription antiterminator, BglG family / PTS ... 151 6e-35 UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbi... 151 7e-35 UniRef50_C6JP15 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 150 8e-35 UniRef50_C9B155 Predicted protein n=2 Tax=Enterococcus casselifl... 150 9e-35 UniRef50_Q184X1 Transcription antiterminator n=6 Tax=Clostridium... 150 1e-34 UniRef50_Q5WC76 Putative uncharacterized protein n=1 Tax=Bacillu... 150 1e-34 UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacte... 150 1e-34 UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 T... 149 1e-34 UniRef50_D1AQE8 Transcriptional antiterminator, BglG n=1 Tax=Seb... 149 1e-34 UniRef50_B0N368 Putative uncharacterized protein n=1 Tax=Clostri... 149 1e-34 UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collins... 149 2e-34 UniRef50_C7T7M7 Transcription antiterminator, BglG family / PTS ... 149 2e-34 UniRef50_A4VZ09 Transcriptional antiterminator n=9 Tax=Lactobaci... 149 2e-34 UniRef50_UPI0001694F32 transcriptional antiterminator, BglG fami... 149 2e-34 UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostri... 148 3e-34 UniRef50_B6FXG1 Putative uncharacterized protein n=1 Tax=Clostri... 148 4e-34 UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR fa... 147 5e-34 UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Cl... 147 5e-34 UniRef50_C7XUI8 Multidomain protein n=1 Tax=Lactobacillus coleoh... 147 5e-34 UniRef50_Q04DX9 Transcriptional antiterminator with PTS system c... 147 6e-34 UniRef50_B0MGK7 Putative uncharacterized protein n=2 Tax=Clostri... 146 1e-33 UniRef50_B0A8M3 Putative uncharacterized protein n=1 Tax=Clostri... 146 1e-33 UniRef50_C8Q416 Transcriptional antiterminator, BglG n=1 Tax=Pan... 146 1e-33 UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdema... 146 2e-33 UniRef50_D1AJW2 Transcriptional antiterminator, BglG n=1 Tax=Seb... 146 2e-33 UniRef50_C4FXZ4 Putative uncharacterized protein n=1 Tax=Catonel... 145 3e-33 UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Seb... 145 3e-33 UniRef50_C6D7L7 PTS modulated transcriptional regulator, MtlR fa... 145 3e-33 UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotr... 145 3e-33 UniRef50_C3RP75 Predicted protein n=2 Tax=Bacteria RepID=C3RP75_... 145 4e-33 UniRef50_UPI0001BC4864 transcriptional antiterminator, BglG n=1 ... 144 4e-33 UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_... 144 4e-33 UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostri... 144 6e-33 UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacteriu... 144 8e-33 UniRef50_D2ELR0 BglG family transcriptional antiterminator n=1 T... 144 8e-33 UniRef50_C5EW03 Phosphoenolpyruvate-dependent sugar phosphotrans... 143 9e-33 UniRef50_B6FYB2 Putative uncharacterized protein n=1 Tax=Clostri... 143 1e-32 UniRef50_Q04I39 Transcriptional regulator, BglG family protein n... 143 1e-32 UniRef50_C3RJ67 Transcription antiterminator bglG n=3 Tax=Bacter... 143 1e-32 UniRef50_C2H0N6 Transcriptional antiterminator n=8 Tax=Enterococ... 143 1e-32 UniRef50_B4U065 Transcriptional regulator, BglG family n=5 Tax=L... 142 2e-32 UniRef50_C5EFX5 Transcriptional antiterminator of lichenan opero... 142 2e-32 UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_... 142 2e-32 UniRef50_B0NXI9 Putative uncharacterized protein n=1 Tax=Clostri... 142 3e-32 UniRef50_D1AH38 PTS modulated transcriptional regulator, MtlR fa... 141 3e-32 UniRef50_D1AIK5 Transcriptional antiterminator, BglG n=1 Tax=Seb... 141 4e-32 UniRef50_C5ERF8 Predicted protein n=1 Tax=Clostridiales bacteriu... 141 5e-32 UniRef50_B0MGN0 Putative uncharacterized protein n=1 Tax=Anaeros... 141 6e-32 UniRef50_C0CV60 Putative uncharacterized protein n=1 Tax=Clostri... 141 7e-32 UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enteroc... 140 8e-32 UniRef50_C9KLV3 Putative multidomain protein n=1 Tax=Mitsuokella... 140 1e-31 UniRef50_C7N9S2 PTS modulated transcriptional regulator, MtlR fa... 139 2e-31 UniRef50_B2DUK0 Transcriptional regulator, BglG family protein n... 139 2e-31 UniRef50_C9A1R6 Predicted protein n=4 Tax=Enterococcus RepID=C9A... 139 2e-31 UniRef50_D1AGS1 PTS modulated transcriptional regulator, MtlR fa... 139 2e-31 UniRef50_C7WZJ5 Predicted protein n=7 Tax=Enterococcus RepID=C7W... 138 3e-31 UniRef50_B0NY60 Putative uncharacterized protein n=1 Tax=Clostri... 138 3e-31 UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax... 138 3e-31 UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostri... 137 7e-31 UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdema... 137 9e-31 UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR fa... 136 1e-30 UniRef50_UPI000196BD9B hypothetical protein CATMIT_02553 n=1 Tax... 136 1e-30 UniRef50_A0KQ06 Transcription antiterminator, BglG family n=1 Ta... 136 1e-30 UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactoba... 136 2e-30 UniRef50_Q18CM3 Putative transcription antiterminator n=8 Tax=Cl... 136 2e-30 UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactoba... 135 3e-30 UniRef50_C9B288 Predicted protein n=2 Tax=Enterococcus casselifl... 135 3e-30 UniRef50_C6SRZ6 Transcriptional antiterminator n=1 Tax=Streptoco... 135 3e-30 UniRef50_A0AKK6 Complete genome n=19 Tax=Listeria RepID=A0AKK6_L... 135 4e-30 UniRef50_C6VLN1 Putative uncharacterized protein n=1 Tax=Lactoba... 134 4e-30 UniRef50_C9A5U2 Transcriptional antiterminator n=3 Tax=Enterococ... 134 5e-30 UniRef50_D1AKT2 Transcriptional antiterminator, BglG n=1 Tax=Seb... 134 5e-30 UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaeros... 134 6e-30 UniRef50_B6FXT7 Putative uncharacterized protein n=1 Tax=Clostri... 134 6e-30 UniRef50_C4V215 N(Pi)-phosphohistidine--sugar phosphotransferase... 134 6e-30 UniRef50_Q5WJN3 Putative uncharacterized protein n=2 Tax=Bacilla... 134 9e-30 UniRef50_C2C4I7 Protein-N(Pi)-phosphohistidine--sugar phosphotra... 133 1e-29 UniRef50_Q7X1P0 Putative transcriptional regulator n=1 Tax=Lacto... 133 1e-29 UniRef50_C3W9R0 Predicted protein n=1 Tax=Fusobacterium mortifer... 133 1e-29 UniRef50_D0GPJ5 PRD domain protein n=1 Tax=Leptotrichia goodfell... 133 1e-29 UniRef50_Q03C88 Transcriptional antiterminator and PTS system co... 133 2e-29 UniRef50_B0P2P0 Putative uncharacterized protein n=2 Tax=Clostri... 132 2e-29 UniRef50_C4FUH4 Putative uncharacterized protein n=1 Tax=Catonel... 132 2e-29 UniRef50_B6G1I6 Putative uncharacterized protein n=1 Tax=Clostri... 132 3e-29 UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdema... 131 4e-29 UniRef50_C3WAJ1 Predicted protein n=1 Tax=Fusobacterium mortifer... 131 6e-29 UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdema... 130 1e-28 UniRef50_D1AI87 Transcriptional antiterminator, BglG n=1 Tax=Seb... 130 1e-28 UniRef50_B2TRB2 Putative phosphoenolpyruvate-dependent sugar pho... 130 1e-28 UniRef50_D0DS07 Multidomain protein n=1 Tax=Lactobacillus fermen... 129 2e-28 >UniRef50_P54901 Stationary phase-inducible protein csiE n=121 Tax=Enterobacteriaceae RepID=CSIE_ECOLI Length = 426 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 426/426 (100%), Positives = 426/426 (100%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR Sbjct: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA Sbjct: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE Sbjct: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR Sbjct: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR Sbjct: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR Sbjct: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR Sbjct: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 Query: 421 KMLESA 426 KMLESA Sbjct: 421 KMLESA 426 >UniRef50_A8GHY9 Transcriptional antiterminator, BglG n=4 Tax=Enterobacteriaceae RepID=A8GHY9_SERP5 Length = 421 Score = 423 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 171/421 (40%), Positives = 241/421 (57%), Gaps = 5/421 (1%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 AP LS QRRC +LL L+ P + T S++NGV I DI+E EI R+H L Sbjct: 6 APVPELSGQQRRCHLLLMLYAPVPAVQLETISQINGVSPPITRQDIAEVASEIQRFHHLE 65 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + D YR+ G+ LNQRLCL HWLRR R P FI F+ L+ L + Sbjct: 66 IDGNPDEGYRIRGSALNQRLCLLHWLRRALRCSPEFIDQHFSRWLQQALGQSADLTP--- 122 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 L+ ++ + + F+ RD FL YL+YC ++ P F+P QR W E Sbjct: 123 --QLEQCISEYEALVNRSFDRRDRQFLQHYLRYCAWENQRRRHPTFSPAQRDWLHQKPEH 180 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 Q + + + P E F+ L+F+ML+ + D +L +I+ +V F Sbjct: 181 QATLLLHQSLNQLFALPPETSENDFLVLMFTMLKNHSYHSNDSTEDLRLMAAIENMVERF 240 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 +++ + F ++ L QL+ HLA A+ R F IGIDNTL EE R YPRL+RT + ALA Sbjct: 241 QQISGMTFSSKEDLISQLFAHLAPAVERCRFEIGIDNTLLEEVERKYPRLMRTAQEALAP 300 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 E EYG+H S EE+GLVA+ FGAWLMQ N L EKQ++LLT ++ + E ++E Q+RELTLL Sbjct: 301 LEQEYGIHFSSEEAGLVAISFGAWLMQGNALQEKQVLLLTLDNPQLEDEVEYQIRELTLL 360 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 PLNIK++ ++ +L +GAP+G L+I PY PPLIYT+L L Q++ IR +LE+ Sbjct: 361 PLNIKYLPLRDYLHSGAPQGVTLVITPYATEHSAPQPPLIYTELPLARQQRKFIRALLET 420 Query: 426 A 426 + Sbjct: 421 S 421 >UniRef50_B2VI26 Stationary phase-inducible protein n=7 Tax=Enterobacteriaceae RepID=B2VI26_ERWT9 Length = 422 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 189/423 (44%), Positives = 255/423 (60%), Gaps = 4/423 (0%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 L+ + LS QRRC++LL L P T+A+ +LNG D +A DI+E EI R H Sbjct: 4 DYLSEGAALSTAQRRCRLLLMLLLPNHDVTLASICQLNGGDRTLARQDIAELAAEIQRNH 63 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 L + G + GT L+QRLCL H LRR RL P F++ F A+K L + + + Sbjct: 64 HLAINPDEAGHLYLSGTPLDQRLCLLHGLRRALRLSPQFVSGWFADAVKRRLLTQPVDKA 123 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 YD+ NL L+ CS++L + F +RD FL ++L+Y L H P+F+P QR+W Sbjct: 124 LYDEHNLTVLIQHCSQQLAREFSARDGFFLQIWLRYSLAWH---CQPEFSPRQRQWLLGK 180 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 E+ +A+EI R WQ+R Q + + L+FS L P + +R L Q+++ + Sbjct: 181 TEYVLAKEIARCWQKRGYQ-TDAHLAMLLTLMFSQLHTPLAATVTGENERALLQAVESSI 239 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 F+ + + F L +LYTHLAQAL R+LFAIGID+ L E YPRL+RTTR A Sbjct: 240 ARFQHIAGIEFRHRPDLSARLYTHLAQALERALFAIGIDDNLSENICLHYPRLLRTTRKA 299 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLREL 362 + FE +Y V S +E LVA+IFGAWL+QEN LHEKQ++LLTG++ E QIEQQLREL Sbjct: 300 MKPFEQQYAVTFSHQEMELVAIIFGAWLVQENALHEKQVLLLTGDNPGLEQQIEQQLREL 359 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 TLLPLNIK+ V F AP G L+I+PY LPL+SPP IYT+L L HQ +R + Sbjct: 360 TLLPLNIKYQDVHDFQHNSAPPGITLVISPYPTSLPLYSPPFIYTELPLGEHQLRSLRTL 419 Query: 423 LES 425 LES Sbjct: 420 LES 422 >UniRef50_A4TMW0 RNA-binding protein n=24 Tax=Yersinia RepID=A4TMW0_YERPP Length = 453 Score = 411 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 166/443 (37%), Positives = 246/443 (55%), Gaps = 21/443 (4%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 P L+ LS QRRC +LL LF P + T S+ NGVD DI+E EI R++ Sbjct: 9 PRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQRFY 68 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPAL------------ 110 L L D Y++ G+ L++RLCL HWLRRG R CP FI F+P L Sbjct: 69 HLELNASADDYYQINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLS 128 Query: 111 ---------KSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLL 161 +S L++ + ++ + L+ +V C L ++ +D FL LYL YC+ Sbjct: 129 SALRRSTLRQSTLRQSTLRQSILRQSTLRQIVYQCEPHLNRQLSEKDRQFLQLYLAYCVW 188 Query: 162 QHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP 221 ++ PQ + Q++W E A + R + P+ E + L+ +M++ Sbjct: 189 ENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLILMLTMIKAH 248 Query: 222 DPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGID 281 D +L +IK+L++ F+ L + F + L QL+ HLA A+ R F IGID Sbjct: 249 HYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGID 308 Query: 282 NTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQI 341 ++LP++ +++YPRL+RTT+ AL FE EY + S EE L+A+ FGAWL+Q N L EKQI Sbjct: 309 HSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQI 368 Query: 342 ILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFS 401 +LLT ++ EAQ+EQQ+RELTLLPL+IK++S +LQ+GAP G A+++ PY + + Sbjct: 369 LLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYLQSGAPAGTAVVLTPYVLQSTESA 428 Query: 402 PPLIYTDLTLTTHQQEQIRKMLE 424 PPLI LT Q Q+ ++LE Sbjct: 429 PPLIQISFPLTEPQSIQLCRILE 451 >UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5DAC1_GEOSW Length = 709 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 95/424 (22%), Positives = 177/424 (41%), Gaps = 15/424 (3%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 +A +R+ + + L + SE V + D+ + R L+ QLTL Sbjct: 87 QYTAKERQAWLAIYLLVKDQQLFLEDLSEKTRVSRNTTIEDLKKL-RAQLKSFQLTLYFN 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPA-LKSELKRRGIARNFYDDTN 128 Y ++G N+R + ++L + P+ Q A LK L +N Sbjct: 146 RQTGYLIKGKEENKRKAIVYYLSL---VIPNQQDWQTVLANLKRLLLPDKDEQNMVILAE 202 Query: 129 LQALVNL---CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 L+ ++N+ C + L +F +H L L + G +F+P+++ + EF Sbjct: 203 LKCILNILNECEKDLNIQFADDVLHHLALRFWLFGKRIVQGKKIEFDPIEKEVIQQTREF 262 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD--PLRDAHQRDRQLRQSIKRLVN 243 + A++ + + +P DE ++A +V H +L+ ++++V Sbjct: 263 EAAKKASKKLESIFQTSIPDDEVYYLATHLLSTKVQYFGNTIQGHDDYGKLKHIVQKMVT 322 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F+ V F + Q + L HL A R + + ++N L E Y L T+ + Sbjct: 323 EFQAFACVTFPNRQEVEKNLLLHLKPAYYRIKYGLQVENPLVELIKTKYKDLFLITKKVI 382 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRE 361 FE+ G +SDEE+ L+A+ FG WL +E K+ IL+ N A + QQL Sbjct: 383 HHFETAIGKKVSDEETALIALHFGGWLRREGIQPKERKRAILICANGIGTSAILRQQLEG 442 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 L ++ +SV+ + + P + A T+ + P+ + LT ++E + K Sbjct: 443 LFSTVDFVETISVRDYEKRDFP---DIDFAVSTVAVSKKKHPVFVVNPILTDQEKETLLK 499 Query: 422 MLES 425 + + Sbjct: 500 KVHA 503 >UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_BACHD Length = 701 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 78/423 (18%), Positives = 172/423 (40%), Gaps = 13/423 (3%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 SA +R+ +++ L + + GV + DI E L L L Sbjct: 87 EYSAQERKAWVVIYLLTRLEPLFLEHLMDRTGVSRNTTIDDIKCLKDE-LNNFHLALEFE 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT-- 127 Y + G ++R L ++L + ++ +P +R R F + Sbjct: 146 RKDGYTISGDETDKRKALVYYLSQAL--PQQNWETELSPIRIFLRTKRDNGRIFTIEELQ 203 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 + +++ + L+ ++ +H L L + + G + +PL+++ + E++ Sbjct: 204 KVYDVISESEKVLKIQYTDDVLHSLSLRFLLFMKRVAKGKFIKVHPLEKQVLKGTKEYEA 263 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFS--MLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 A+ + ++ P +E L++ + + ++ + ++L + +VN F Sbjct: 264 AKVMSFKLEQAFGVHYPDEEVLYLTTHILSSKINYANGEIESRKESQELTHIVTSMVNDF 323 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 ++ V F +++ L L+ H+ A R + + ++N + E YP L TR + Sbjct: 324 QKYACVVFEEKELLEKNLFFHIKPAFYRIKYGLEVENNIAESIKTSYPELFLLTRKVVHY 383 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLRELT 363 E G ++D E + + F W+ +E + K+ +++ N ++ QL L Sbjct: 384 LERYVGKSVNDNEVAFITMHFVGWMRREGTIPTKRKKALIVCANGVGTSQFLKNQLEGLF 443 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 IK S++ + +T P II+ T +P + P+ + LT ++E++ K + Sbjct: 444 PAVDIIKTCSIREYEKT--PVEVDFIIS--TTSIPEKNVPIFIVNPILTETEKERLLKSV 499 Query: 424 ESA 426 A Sbjct: 500 HVA 502 >UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Geobacillus RepID=C9RTV4_GEOSY Length = 714 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 86/423 (20%), Positives = 169/423 (39%), Gaps = 14/423 (3%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S +R ++ + L + SE V + D+ + R L QLTL Sbjct: 87 AYSKKERLARLAIHLLVEEPPHFLKDLSEKTKVSRNTTIKDLKKL-RAQLNSFQLTLCFT 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 Y ++G ++R + ++L + P Q A L + + L Sbjct: 146 RYTGYVIKGKEEDKRRAIVYYLSL---VIPHQQNWQTVLANLKRLLIHDEDESTTVLSEL 202 Query: 130 Q---ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + ++N C + L +F ++ L L + G F+P+++ + EF+ Sbjct: 203 RNILDVLNECEKNLNIQFADDVLYHLALRFWLFGKRIVQGKKIDFDPVEKEVIQQTKEFE 262 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD--PLRDAHQRDRQLRQSIKRLVNH 244 AQ + +P DE ++A +V +H + L+ ++++V Sbjct: 263 AAQTARSKLESIFQTSIPDDEVYYLATHLLSSKVQYSGNSLQSHDDYKNLQNIVQKMVTE 322 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F+ + F + + + + L HL A R + + ++N + E Y L T+ + Sbjct: 323 FQAFTCITFPNRKAVEENLLLHLKPAYYRIKYGLQVENPMIELIKTKYKDLFLITKKVIH 382 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLREL 362 FE+ G +SDEE+ L+A+ FG WL +E K+ IL+ + + +QL L Sbjct: 383 HFETAIGKKVSDEEAALIAIHFGGWLRKEGIQPKERKRAILICASGIGTSTILRKQLEGL 442 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 ++ +SV+ + Q + A T+P+ P+ + LT ++E + K Sbjct: 443 FSTVDFVETISVRDYEQRDF---HDIDFAVSTVPVSKKKHPVFVVNPILTDQEKETLLKK 499 Query: 423 LES 425 + + Sbjct: 500 VHA 502 >UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D94 Length = 696 Score = 316 bits (810), Expect = 8e-85, Method: Composition-based stats. Identities = 86/429 (20%), Positives = 159/429 (37%), Gaps = 28/429 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R + L L + +EL V D++ E ++ +L +T Sbjct: 79 LSPRERLAWMSLYLLSAESPLFVHHLTELLQVSRGTVLKDLNMVRSE-MKSVKLKVTYDR 137 Query: 71 DGSYRVEGTVLNQRLCLFHWL---------RRGFRLCPSFITSQFTPALKSELKRRGIAR 121 Y V+G ++R L H+ + F L P P L ++ G+ + Sbjct: 138 KRGYGVQGEERDKRKTLSHYFGQIFGHAGWEQAFNLNPESGVPDLAPLLFPPMEEGGLEQ 197 Query: 122 NF--YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 + D+ + V+L + L + + + +R Sbjct: 198 VYRLISDSEITLGVDL---------TDEMLFHLTARFLLYVRRIQTAQWVSIDDDERSVL 248 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP--DPLRDAHQRDRQLRQS 237 E++ A I + VP DE + A+ RV + + + + +QLR Sbjct: 249 RRTPEYEAAARIAEGLGQMFGVSVPDDEVCYFAMHLLGARVNRMEQMTGSEEVLKQLRNV 308 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 + +HF+ V + + + + L HL A R L+ + ++N L E Y + Sbjct: 309 TTEMTDHFQRYACVFLPNREAMEENLLVHLKPAYYRILYGLSLENPLLENIRSKYGEVFE 368 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQI 355 TR + A FE G L D E G +A+ FG WL +EN +Q ++ N + Sbjct: 369 LTRRSAAPFEQLVGRKLDDHEIGYLAMHFGGWLRRENTKPAVRRQAAIVCVNGISASRML 428 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 + QL L +S++ + + R + T+PLP P++ + L+ Sbjct: 429 KSQLENLFSAVDITAVLSLRDYE---SFREEDVDFIFSTVPLPDSKVPVLLVNPILSDKD 485 Query: 416 QEQIRKMLE 424 +E + + Sbjct: 486 KEHLLNQIN 494 >UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus RepID=Q5KYD3_GEOKA Length = 684 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 81/414 (19%), Positives = 149/414 (35%), Gaps = 20/414 (4%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R+ I L + + F E V DI E + QL L+ Y Sbjct: 92 ERKAWIGLWILTRVHPLYLCDFLEKLQVSRSTLLNDIKELKEDWQ-SFQLQLSFHRKKGY 150 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 G + +R + ++ + F L +E + + Sbjct: 151 FSSGEEIQKRKLMIRYIHQILAAMD---DQHFAAELSAE-----------CQWPIFDWIC 196 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 R+ I L +YL + G Q + ++ S E+Q+A + R Sbjct: 197 QFESTFSIRYTGEVIQTLPIYLALFQRRWARGKFVQMDEQEKEVLRSMREYQIADHLVRR 256 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKRLVNHFRELGNVRF 253 + + +P DE ++ RV D + D + L++ I+ +V+ F+ V+F Sbjct: 257 IENVSQISIPDDEVCYLTTHLLSFRVADDKQMDQNDDITTLKRIIRHMVDDFQTYACVQF 316 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 + L L H+ A R + + N L E Y L T+ + ES G Sbjct: 317 KRREELEKNLLVHMKPAYYRLKYGFHLQNDLTESVKANYQDLFTLTKKVVHHLESVVGQP 376 Query: 314 LSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 +SD+E +A+ FG WL +E K+++++ + +++QL EL I Sbjct: 377 VSDDEIAYIAMHFGGWLDREGVSVPVRKKVLIVCESGIGTSRMLQKQLGELLSTVDVIGV 436 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 +S + + ++ T PL P+ LTT + + + +E Sbjct: 437 VSAREYDYISLAGHVDFVVT--TTPLQPKDVPVYTVRPILTTEDKMLLLREIEG 488 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 314 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 87/437 (19%), Positives = 182/437 (41%), Gaps = 26/437 (5%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + PS +RR IL L Q + FS+ GV S D+ E + I + Sbjct: 76 LDIVGYPSEFETEERRKMILSELLQLNEPVKLEYFSKKFGVTTSTISYDLKELEKWIEK- 134 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKS-ELKRRGIA 120 LTL T + G+ + R + ++L F T+ LK+ L + I Sbjct: 135 QGLTLITKPGYGVYISGSENSFRKAIANFLYENFD------TADLIDFLKTGYLAKNNIE 188 Query: 121 RNFYD--------DTNLQALVNLCSRRLQKRFESRDIHFLCL--YLQYCLLQHHAGITPQ 170 +N DT L+ + + Q +E + +L L +L + + G T + Sbjct: 189 KNIDLRLLNLIDYDTVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIKRLQNGETIE 248 Query: 171 FNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR 230 + + E++ A+++ ++ Q P+P DE ++ + + ++ + + Sbjct: 249 MGEDNLQELKKTNEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAKYRSTTQNYNDK 308 Query: 231 DRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFAR 290 D ++ + ++ ++ +V F +++ L D L +HL A+ R + I N L E+ Sbjct: 309 DIEI--IARDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIRNPLLEDIKT 366 Query: 291 LYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ-IILLTGNDS 349 YP L + + + + ++E G +A+ FGA L ++ + +K I+++ + Sbjct: 367 KYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYIAMHFGAALERKKEAAKKYNIMVVCASGI 426 Query: 350 EREAQIEQQLRELTLLP-LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTD 408 + + +L + P +NI ++ L+ R +I T+PL + ++ + Sbjct: 427 GTSRML---MSKLQMFPQINIVDVTSSIKLKDLKGRDDIDLIVS-TIPLDIKDKKVVVVN 482 Query: 409 LTLTTHQQEQIRKMLES 425 L E+++K L + Sbjct: 483 PLLLKEDVEKLKKALNT 499 >UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QUF4_9BACI Length = 685 Score = 310 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 82/425 (19%), Positives = 152/425 (35%), Gaps = 33/425 (7%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S+ +R+ I L +F + E V D+ + E QL L Sbjct: 88 EYSSDERKAWIGLLIFIRSGRIFLHDLLEKLQVSRSTLLNDVKKLKSEWQ-LFQLELAFH 146 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGF------RLCPSFITSQFTPALKSELKRRGIARNF 123 Y V G +R + H+ + RLC + P Sbjct: 147 RKQGYFVIGEEKQKRKAIVHYAAQILATVGYERLCSELLGGHILP--------------- 191 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 ++ ++ R+ + IH L +YL L + G Q + ++ +S Sbjct: 192 -----VKNIIRQSETFSAIRYTNDVIHTLTVYLSIFLKRWIRGKYIQMDEQEKEVLQSTR 246 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKRLV 242 E++ A I + VP DE ++ RV D + D + L+Q IK +V Sbjct: 247 EYKTAHHIITQIENVFQVDVPQDEICYLTTYLLGSRVTDDKQIDQNNEIATLKQIIKNMV 306 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + F++ V+F + L L H+ A R + + + N L + Y + T+ Sbjct: 307 DDFQKYACVQFKHREELEKNLLIHMKPAYYRLKYGLHLQNELTQSVKANYHDIFTLTKKV 366 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLR 360 + E+ G + D+E +A+ FG WL +E K+ +++ + +++Q+ Sbjct: 367 VHHVENVVGQSVGDDEIAYIAMHFGGWLDREGVSVPTRKKALIVCESGIGTSRILQKQIE 426 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 EL I +S + + A + T+PL P+ LT + + Sbjct: 427 ELLPTVDVIDIISAREY---KAYSLEHVDFVVTTIPLEPRDIPVYIVRPILTAADKMLLL 483 Query: 421 KMLES 425 + Sbjct: 484 RETNG 488 >UniRef50_Q63A16 Possible transcriptional antiterminator, bglG family n=15 Tax=Bacillus cereus group RepID=Q63A16_BACCZ Length = 701 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 70/420 (16%), Positives = 155/420 (36%), Gaps = 10/420 (2%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S +R+ ++L L + L V + D+ + E+ +Y+ L+L + Sbjct: 87 EYSPKERKIWLILYLLIQEKRILLKDLINLLQVSRNTVLADLKKLKVELNKYN-LSLHSF 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 Y++ G ++R L L + + S++ + Sbjct: 146 RKEGYQIVGNEQSKRNLLILSLSQIISQNGWEYLISQVNYIMSDMGSETDTLARETLYII 205 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++ C L ++ + L +Y+ + G + ++ + +F+ A+ Sbjct: 206 KKILANCEEFLGVQYTDEVLENLSVYMYLFHRRILKGKCVEMEEAEKNVLKDSKQFEAAK 265 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLR--VPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 I + ++R + P DE ++ + + + + + D ++ + ++ F+ Sbjct: 266 YIAKQFERAFVVKFPIDEIYYITTHLLGAKVNYQENVYEKNNMD-EIHSIVDCMIKDFQH 324 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 V F D GL LY H+ A R + I I+N L Y + T+ + FE Sbjct: 325 YACVLFQDFNGLFTDLYLHMKPAFYRVKYGIEIENPLRNTIQENYEEVYFLTKKVIHHFE 384 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 +SD+E V + FGAW+ +E K +L+ N ++ QL +L Sbjct: 385 EYVRKSVSDDEIAYVTMHFGAWMRKEGIVPNPRKTALLVCPNGIGTSRMLQYQLEKLFSN 444 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 + +S + + II T + + P+ + L+ ++ + + + Sbjct: 445 IDILNAISKREYESNTF--DVDCIIT--TTEIEKGNVPVFKVNPILSDSEKAALLRKVNG 500 >UniRef50_A8FDW3 PTS family L-ascorbate (L-asc) porter component IIA n=2 Tax=Bacillus pumilus RepID=A8FDW3_BACP2 Length = 678 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 78/427 (18%), Positives = 156/427 (36%), Gaps = 23/427 (5%) Query: 5 LAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQL 64 + +RR +LL++ + +L V + D+ + +E L QL Sbjct: 71 VGHDYEPCVKERRAILLLSIACNEKYLKIDDLMKLTKVSRNTLLEDMKQL-KEALSKQQL 129 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 TL Y + G RL L ++ R + + LK + Sbjct: 130 TLHYQAACGYLISGEERAIRLALKPYI-HSIRTMIKNEKAFSSFWLKGPISYN------- 181 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 L+ L+ + L+ F + L L L + + G + ++R + E Sbjct: 182 ---RLKHLLEQSEQELKLEFADDMLDQLSLDLFFYFKRMKLGRDIHLSNEEKRTLQETDE 238 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 A Q+ V DE F++ L+ + + + +R ++++ Sbjct: 239 CLAAIRFMARIQKETGLHVHDDEIYFLSTLWLSAKKQKLPSSQNPEEHLIRTIARQMIFD 298 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F+ + F + + L L HL A R ++ I I+N L E + P + T+ + Sbjct: 299 FQRYACISFEEYEALEQNLTMHLIPAYYRLIYHIDINNELTESIKKTQPEVFDITQKVVC 358 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLREL 362 E +S+ E VA+ FG W+ +E + + + + ++ G ++ QL EL Sbjct: 359 HLEKATCSKISEHEMAYVAMHFGGWMRREGISPIVRRSVYIVCGEGIGTSHMLKTQLIEL 418 Query: 363 TLLPLNIKHMSVKAFLQTGAPRG---AALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 I ++ V+ L + + T P+ P+ LT+++++ + Sbjct: 419 ------IGYIEVRDLLSKRSYEEMSSIDVDFVVSTTPISFKGKPVHLVHPILTSYEKKTL 472 Query: 420 RKMLESA 426 + E A Sbjct: 473 LQYGEGA 479 >UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXJ3_9BACL Length = 696 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 79/422 (18%), Positives = 163/422 (38%), Gaps = 16/422 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS+ +R+ + L L + L V A ++ +E L + L++ Sbjct: 76 LSSGERKALLCLRLVNRSTPLFLHDMEALLQVSRGTAHAELKRLKKE-LEDYALSIQFDR 134 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF--YDDTN 128 Y ++G + R L +L + +PA + R+F + + Sbjct: 135 KQGYFIQGNEKDIRAVLSRFLFEQLSYADWNPS---SPAFDGLIHTDLFRRHFPAFREEE 191 Query: 129 LQALVNLC---SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 L ++ + +++ + I L L + + G T Q ++ L+F Sbjct: 192 LDSVYRIIVSTEQQIGMEWTDETILHLTLRIWLSANRMKQGRTVQLEEEEKAALRETLQF 251 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD-PLRDAHQRDRQLRQSIKRLVNH 244 + A +I R VP DE ++A+ +V + ++LR + + +++ Sbjct: 252 KAATQIADELGERFDLRVPEDEIGYLAIYLLAAKVNRVEVESDTWETKRLRAATEEVIDL 311 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F + G V F + + L QL+ H+ R + + IDN L ++ Y + TR + + Sbjct: 312 FAKNGCVYFQNREALVKQLFLHVKSMFYRIKYGLTIDNPLTDKILEEYREVYELTRKSAS 371 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLREL 362 E + L E + + FG WL +E H K+ ++ N ++ QL +L Sbjct: 372 PLERLFEKPLGRHEIAYLTMHFGGWLKREQAKTEHRKRAAVVCVNGVSASRLLKNQLEQL 431 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + +S++ F + P LI + T+PL P+ + ++ ++ + Sbjct: 432 FPSLDLVAVLSLREFEKFTDP--VDLIFS--TVPLSGCQVPVFILNAVMSDAEKTHLLSR 487 Query: 423 LE 424 + Sbjct: 488 VN 489 >UniRef50_D0ZD91 Transcriptional antiterminator n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZD91_EDWTE Length = 343 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 106/346 (30%), Positives = 158/346 (45%), Gaps = 12/346 (3%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 M + P S +R C + L L P TMA +L D A D++ +I+R Sbjct: 1 MQNDVPLPPPHSRAERHCNLALLLLLPTAPLTMARLCKLQQQTPDEAEQDLNHLVNDIMR 60 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 YH L ++ YR++G RLCL HWL+R R P+ +PAL R+ + Sbjct: 61 YHALHISFHPRHGYRLQGPAYEWRLCLLHWLQRTLRYFPANAARLLSPALPPAFPRQTLC 120 Query: 121 RNFYDDTNLQALVNLCSRRL--QKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPL---- 174 LQ++ L S+ + F R + + ++Y +Q G + P Sbjct: 121 ERL-----LQSVPRLESQAIPASAAFTPRQRQLIDIMMRYAAVQRRGGRSDSLMPCWLLP 175 Query: 175 -QRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQ 233 +RRW + E+ VA+ + R + A V E LF LL ++L+ + +D Sbjct: 176 YRRRWLQQKEEYAVAEALCRIYIGDAPADVLDQERLFATLLLTLLKNHSHSPRENAQDSA 235 Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 L I+R V+ +VR + LC +L+ HL A+ R+LF I I L E A +P Sbjct: 236 LMHEIERCVDCVERDSDVRLSQRERLCARLFAHLGAAIERALFDIRIGTPLAAELASHHP 295 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK 339 L+ TR A+AG E Y + S EE L+AV GAWLMQ L E+ Sbjct: 296 ALLALTRRAIAGLEQRYRIRFSPEELSLIAVSIGAWLMQAGRLQEQ 341 >UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2H7N3_ENTFC Length = 661 Score = 260 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 78/422 (18%), Positives = 168/422 (39%), Gaps = 27/422 (6%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 P + R+ IL L M +E + + D+ +E L + L + Sbjct: 91 PQGFYESEDRQKYILNQLLLEDAILFMDDLAEELYISRSSLTKDMQAI-KERLIPYSLKI 149 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + + +EG N+R H+ + +F + +LK L + F+ D Sbjct: 150 VSKHGQGIWIEGEERNRR----HF------IMDTFFGNHCGNSLKEYLGQS----RFFTD 195 Query: 127 TNLQALVNLC---SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 + + LV + +R + + I L L+L + + G + +++ ++ Sbjct: 196 ISFEELVIIILDETREAKLKVSDFIIQNLSLHLALGIKRLREGFEIKELGIEQEVSDRV- 254 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 E+QVAQ I + + A P +E ++ L ++ + +++ + +KRL Sbjct: 255 EYQVAQRIVQRIEVIADVSFPQEEIAYLTLHLMAKSNHRENKNDQELSKEVVKVLKRLSQ 314 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 FR ++ L + L HL+ + R I I+N L EE + P++ + Sbjct: 315 EFR----FSLIEDHQLFNGLLDHLSPMMIRLSRGIRIENPLTEEIKKENPKVFEAVKTHF 370 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 + + ++++E +A+ A L +E H+ +++ ++ R ++ Sbjct: 371 SNMPALKNYTINEDEWAYLALHLMAALEKERAAHKLHALIICATGYGSAQLLKN--RVIS 428 Query: 364 LLPLNIKHMSVKAFLQTGAP--RGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 NI ++VK + + +G LII+ + F P+++ + L +IRK Sbjct: 429 EFGKNITVVNVKGYYEINETTLKGIDLIISSIDLSTMFFKIPVLHVSIFLNEDDVHKIRK 488 Query: 422 ML 423 ++ Sbjct: 489 VI 490 >UniRef50_C2FLI0 BglG family transcriptional antiterminator n=2 Tax=Lactobacillus plantarum RepID=C2FLI0_LACPL Length = 707 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 75/426 (17%), Positives = 160/426 (37%), Gaps = 42/426 (9%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 RR +LL LF T++ + GV + D+S +E L +++ L D + Sbjct: 98 DRRNILLLALFVGERDITISQLMNITGVARNTVISDLSRVRKE-LGENRIELVGTKD-GH 155 Query: 75 RVEGTVLNQR----------LCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 + G L R + + W+++ ++ SF + T L Sbjct: 156 SLRGQELTIRNYFQVHFTALIDGYDWVQK-YQADNSFFAGKDTVGL-------------- 200 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQ-----FNPLQRRWA 179 +T L ++L R+ ++ F I + Y + L + +G N RR Sbjct: 201 -NTMLNDWMHLVERQSERAFSDDAIRMIEFYYAFVLKRILSGCFIPQDTFPSNIDDRREL 259 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP--DPLRDAHQRDRQLRQS 237 + EF +A + E L++ L ++ +P + + + + + Sbjct: 260 RNKKEFGLASNLLAQVGVE--VGSHDSEALYLESLLLSGQLHSVEPDERDNVKTKVYKAA 317 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 I+ +V F+++ FYD + L +LY HL R + + + + YP + Sbjct: 318 IE-VVESFQQITGFSFYDRRQLTSELYVHLLSTYYRVKYHRQYRDGMVKAIEENYPDIYT 376 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQ 357 T ++ FE L++ E L+A+ FG+ + Q+ + H +L+ ++ Sbjct: 377 YTELSIRPFEKLNNYPLNENELSLIAIYFGSQMYQD-ESHLGSALLVCSTGLGTSRMLKV 435 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 QL + ++ + + + + + T+PL + ++ + + Sbjct: 436 QLESAFKGLKFVGPITKRNY---NSLTQISESVVLSTIPLDKKNREVLVLHPIMNDREIN 492 Query: 418 QIRKML 423 ++ K L Sbjct: 493 ELTKQL 498 >UniRef50_Q899A8 Transcriptional regulatory protein n=3 Tax=Clostridium RepID=Q899A8_CLOTE Length = 650 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 63/414 (15%), Positives = 155/414 (37%), Gaps = 13/414 (3%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 + + +++L L + + T+ S GV S + E LR + L + Sbjct: 38 ENKYRLILYLLKSHYSRTLQEISNFLGVSRSTTSKYLDEIEG-YLREKGVQLVRRRNKGI 96 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + G L +R ++ + + I P +L + L++ Sbjct: 97 YIVGRELQKRRIIYDIILHSYDYSR--IHGLLQPETIYDLMIWNYFYGIDIKHIWELLID 154 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 + + + + + + + + + E+ A+ Sbjct: 155 TL-KAINISVSDMAFYNIIINTCIMIKRIQQDFIADIEYEKMDYISETFEYDEAKNYCNE 213 Query: 195 WQRRALQPVPPDEPLFMALLFSMLR----VPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 +R +P E +++++ F + D + + +L SI+++V+ F + + Sbjct: 214 LSKRYNIIIPKTEIIWISMHFLGANPIKFLEDDIFSNIKERHKLVNSIEKMVSQFEKEVD 273 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + ++ + + L+ HL A+NR+ ++I I N+ E+ Y T + +E+ Sbjct: 274 IALENKDEIINGLFVHLMPAINRAKYSIKIKNSYKEDIKNSYNEFYTITANLVRIINNEF 333 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 V L +E V + F A + + N + +K+II++ + +LR + Sbjct: 334 NVELGSDEISYVCLHFVAAIEKMNKSYATKKRIIVVCSTGVGTSKLLANKLRNSY---DD 390 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 I+ + + ++ Q + + T+ L + P+I + + ++Q+ K+ Sbjct: 391 IEIIDILSYNQFISRNTFDIDYVISTVALKEANVPVIVVNPLINDEDKKQLSKI 444 >UniRef50_UPI0001C425D1 mannitol operon transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C425D1 Length = 689 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 68/417 (16%), Positives = 147/417 (35%), Gaps = 20/417 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 +A +R+ IL+ LF + + + D+ ++ + ++L + Sbjct: 87 EYTAHERQKLILILLFTSHEPIYVKDLITVTKASRNSCLNDLKAI-KQQSKQYRLEINYE 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 Y + G R W F + F+ L S K + + N+ Sbjct: 146 RSSGYYIHGPEFELRK----WFVNAFTF---QKDNDFSTELMSLWKEANPSLLETVEHNV 198 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 Q L+ + L + I L ++ + L + G +++ E+ ++ A+ Sbjct: 199 Q-LLQVLQNDLDVQLNPESIEELTWHIAFFLERMKLGEYVFLTKDEKQALENNRAYKGAE 257 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + VP DE ++ + LR + L ++++V F+ Sbjct: 258 LLSQELFNSNQLSVPEDEIYYLTIFLLSLRSLSDSPMSTV--NGLEDVVRKMVIDFQRYA 315 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + F + + + L H+ A R + I N L + Y + T+ L E Sbjct: 316 CIEFEHFRAVEENLLIHIRPAFYRLKYGISAKNPLTKSIKEKYGDVFELTKKVLPHLERF 375 Query: 310 YGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 G ++D+E+ + + FG W+ +E K +++ + ++ QL L Sbjct: 376 VGAAINDDEAAYITMHFGGWMRKEGSQPAARKHALIVCSSGIGTSQILKSQLETLFSTLD 435 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 S++ + A LI T+ L P + + L ++E++ + Sbjct: 436 FEVVTSIEE-----SKTKADLIFT--TVSLQKQMLPTFHVNAILNDVEKERLLTNVN 485 >UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZR0_HALOH Length = 741 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 70/433 (16%), Positives = 165/433 (38%), Gaps = 23/433 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R+ IL LFQ + + + D+ E + + H L L Sbjct: 89 LSPKERQHLILFRLFQANEPIIIKELEIMLRISKSTIIKDLDEVENWLSK-HNLILIRKT 147 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD---- 126 + ++G ++ R + + L + K L+ R + F+ + Sbjct: 148 NYGLEIKGDEIDIRHAMMNVLEET--ANEKELVGFLRQIQKKALEERNLEPGFFKEFDKL 205 Query: 127 ------TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 T ++++++ ++L +F L ++L + + G Q + + + Sbjct: 206 VSGIDLTKIESVISFAEKQLGFQFADEAYASLLVHLALAISRLLEGKDIQLPEERLKVIK 265 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDA-------HQRDRQ 233 E+++A++IG+ ++ +P E ++ L ++ + D D++ Sbjct: 266 KSDEYKIAKKIGKIMEQIFDISIPDSEIGYVTLHLMGAKLWQKIGDDDYKKLINQDLDQE 325 Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 L K +V + V+ D+ L L HL +NR + + + N L + Y Sbjct: 326 LIILTKEMVKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIKYDLPLKNPLLLDVKSRYG 385 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREA 353 + + + A +S+ +S +E G + + GA L + + +++L+ + Sbjct: 386 EIFKAAKRAAKILQSKLQKSISSDEIGYITLHLGAALERSKSSRKLRVVLVCSSGVGTTN 445 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAP-RGAALIIAPYTMPLPLFSPPLIYTDLTLT 412 + +L + +SV + LII T+PL + ++ + L+ Sbjct: 446 LLSSRLSKEFSEIKICNVVSVIQLENNEVDLKNIDLIIT--TIPLDIDDILVLQVNPLLS 503 Query: 413 THQQEQIRKMLES 425 ++ ++ +++S Sbjct: 504 QKDKKNVKAIIQS 516 Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 67/410 (16%), Positives = 124/410 (30%), Gaps = 43/410 (10%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 +S R CQ+L L ++ ++ V D+ + I + L Sbjct: 1 MSLKPRVCQLLKYLIDQEKAVSIKQLADRFNVSSRTIRYDLDDIESSI-SSYDAKLIRKT 59 Query: 71 DGSYRVEG--TVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 +EG LN+ L R+ L + + Sbjct: 60 RIGVYLEGKEEELNKIQEELANLYGLERILSPKERQHLI--LFRLFQANEPIIIKELEIM 117 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 L+ + + L + H L L + G E + Sbjct: 118 LRISKSTIIKDLDEVENWLSKHNLILIRKTNYGLEIKGDEIDIRHAMMNVLEETANEKEL 177 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 R Q++AL+ + F + D L + I+ +++ + Sbjct: 178 VGFLRQIQKKALEERNLEPGFF--------KEFDKLVSGIDLTK-----IESVISFAEKQ 224 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGF 306 +F D L HLA A++R L I + + + + + Sbjct: 225 LGFQFAD--EAYASLLVHLALAISRLLEGKDIQLPEERLKVIKKS--DEYKIAKKIGKIM 280 Query: 307 ESEYGVHLSDEESGLVAVIFGA---WLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 E + + + D E G V + W +D ++K I ++Q+L LT Sbjct: 281 EQIFDISIPDSEIGYVTLHLMGAKLWQKIGDDDYKKLI----------NQDLDQELIILT 330 Query: 364 --LLPLNIKHMSVKAFLQTGAPRGAALIIAP----YTMPLPLFSPPLIYT 407 ++ + ++ VK T G AL + P LPL +P L+ Sbjct: 331 KEMVKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIKYDLPLKNPLLLDV 380 >UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Clostridia RepID=B0K247_THEPX Length = 705 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 69/418 (16%), Positives = 152/418 (36%), Gaps = 9/418 (2%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R IL L Q T+ + ++ V D+ + RE L H L L + Sbjct: 96 LSQKERVNIILSELIQQKDYITINSIADKLMVSRSTIIKDLKDV-REWLTRHGLQLKSAP 154 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL- 129 +V G R L + + + +S + ++D ++ Sbjct: 155 KYGIKVVGDEKRLRRAAIELLTEAIDVDKALDIVKSPIYTRSSVGIDKQITKLFEDIDIP 214 Query: 130 --QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 + + + R L+ F L +++ + + G + + E EF V Sbjct: 215 YIEECIQIAERELETVFSDAAFSGLVIHIAIAIKRIQLGKDIIMPKEELKALEITKEFAV 274 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A I + + +P DE ++ + V ++ + + ++++ + Sbjct: 275 ASNIAKMLEDHFKVSIPLDEIGYITVHLLGSNVSKTRPYPNENWVEYQLLTEKIITNVTN 334 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 + ++ L + L HL + R + + N + +E Y L + +L E Sbjct: 335 KIHQDLSGDRQLFEGLLDHLRPTVYRLKHGLKLKNPILDEIKANYKELFEIVKESLKPLE 394 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREAQIEQQLRELTLL 365 G L+DEE G + FGA + + + I+++ G + +L+ + + Sbjct: 395 DYTGKALNDEEIGYFTIHFGAAIERLKVTKAPKPNILVVCGTGIGTAKLLSSRLQSVFDV 454 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + ++ + + LI++ T+P+P I + LT E ++ ++ Sbjct: 455 NI-VDAVAYHQVKERLKEKDIDLIVS--TVPIPYEGIKTIEVNPLLTEKDIELLKDLV 509 >UniRef50_B8DAY8 Transcriptional antiterminator, BglG n=24 Tax=Listeria RepID=B8DAY8_LISMH Length = 688 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 79/417 (18%), Positives = 155/417 (37%), Gaps = 20/417 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 V SA +RR +IL L + T +E N V + + DI + L+ L L Sbjct: 88 VFSASERRIRILFFLLVTDARVIIDTINECNEVSRNTSLQDIKQLKLA-LKQFNLELVYD 146 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 V G + R H+ T+ L F + Sbjct: 147 RKNGNMVLGDERSIRQFFIHYCMNN----EEIATADQLLDLMKINPMIKNQELFPKLDTI 202 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 ++ + +++ R+ + + + + + + L + F++AQ Sbjct: 203 FEILAVTEKKIGIRYTDEVLERIGIMIFFFKERMKRNCY-----LNEQEEHEVESFEIAQ 257 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 EI + Q+ + E ++ L L D + +L +++++ F L Sbjct: 258 EIYQQLQQSENFKMNHAEITYLGKLLLGA---SRLNDDAAAEGKLDLIVEKIIAEFERLA 314 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 V F D + L L HL A R F I N L + + Y + T+ +L E Sbjct: 315 CVNFEDHRNLKKDLLLHLQPAYYRLKFQIEWINPLRTDIKQSYSDVYEITKKSLEPLEDL 374 Query: 310 YGVHLSDEESGLVAVIFGAWLMQEND--LHEKQIILLTGNDSEREAQIEQQLRELT-LLP 366 G + ++E V ++FG +L ++N+ + K+++++ IE+QL +L Sbjct: 375 LGETIPEDEIAYVTILFGGYLSRKNNTLVERKKLLIVCSKGVGTSRMIERQLSQLLGERV 434 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ +S++ F + T+P+ P+ LT Q++Q+ K + Sbjct: 435 EILEPISIREFEKGLYAPD----FIVSTLPIMEPKAPVFIVSPILTEAQKQQLMKAI 487 >UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR family n=3 Tax=Thermoanaerobacter RepID=C6PFK2_9THEO Length = 651 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 71/433 (16%), Positives = 155/433 (35%), Gaps = 36/433 (8%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 P V +R L + T+ FS V + DI + E L + Sbjct: 86 PIFPDDRVYYIAKR-------LLETNNLMTLEDFSVELYVSKSTVAKDILKVE-EFLGKY 137 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 + L +V G + RL L+ I LK Sbjct: 138 GIKLYKKPKHGIKVIGDEKSIRLANAEILKNVTTKHDEIINDSLKDLLKD---------- 187 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 D +Q ++ + L ++L + + G + + Sbjct: 188 -VDLNAIQRIIQGSEEKFNYILSDVSFKGLLIHLAISIKRLWEGKKVTLDLKDLNLLKKE 246 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQ------ 236 E+++A+++ ++ ++R V E ++ + ++ + + + L++ Sbjct: 247 KEWEIAKDLAKNIEKRFNVVVDDTEIGYITMHLMGAKLQNDIETEKFSENYLKRLDCKLY 306 Query: 237 -SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 +K +VN E+ +FY+++ L L+ HL +NR + +DN EE + Sbjct: 307 IILKSIVNDIAEMTGYKFYNDKKLLVGLFLHLKPTINRLKNGVKLDNPFLEEIKKECGIA 366 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREA 353 + + + Y ++++++E G VA+ FGA + + + ++K +++ Sbjct: 367 FEISISFWEKLKEFYKINVNEDEIGYVAIHFGASIERLKSVDRNKKTAVIVCATGIGTAQ 426 Query: 354 QIEQQLRELTLLPLNIKHMSV---KAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLT 410 + +L +L IK + V K+ L+ +P I T+P +I Sbjct: 427 LLTARLTKLFPNIELIKVLPVIKAKSMLKDLSP-----DIVLSTVPFETEEAVVINVSPF 481 Query: 411 LTTHQQEQIRKML 423 L ++I +++ Sbjct: 482 LDEEDVDKIERIV 494 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 97/324 (29%), Gaps = 36/324 (11%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R +IL+ L + T++ S + GV DI E ++ L +++ + T Sbjct: 5 REKKILIALKEAKKPLTISNLSAITGVTTRTVKKDI-EILKQKLDRNKVEIITKPGVGVW 63 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +E V + +L I F + +R + N ++ Sbjct: 64 IEEKVDD------EYLENVLYSSNKIINPIFPDDRVYYIAKRLLETNNLMTLEDFSVELY 117 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 S+ + + FL Y + GI + ++A Sbjct: 118 VSKSTVAKDILKVEEFLGKYGIKLYKKPKHGI---------KVIGDEKSIRLANA----- 163 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + DE + + +D L +I+R++ E N D Sbjct: 164 EILKNVTTKHDEII------------NDSLKDLLKDVDL-NAIQRIIQGSEEKFNYILSD 210 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 L HLA ++ R + L + + + E + V + Sbjct: 211 VS--FKGLLIHLAISIKRLWEGKKVTLDLKDLNLLKKEKEWEIAKDLAKNIEKRFNVVVD 268 Query: 316 DEESGLVAVIFGAWLMQENDLHEK 339 D E G + + +Q + EK Sbjct: 269 DTEIGYITMHLMGAKLQNDIETEK 292 >UniRef50_O31644 Putative phosphotransferase enzyme IIA component n=19 Tax=Bacillaceae RepID=MANR_BACSU Length = 648 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 76/425 (17%), Positives = 156/425 (36%), Gaps = 38/425 (8%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R I L + + + V+ D+ E L+ LTL + Sbjct: 93 SDKERMLHIAYDLLMNPKPVSAKDIAARHFVNRSSIKKDLYAVE-EWLKRFDLTLVSRQR 151 Query: 72 GSYRVEGTVLNQRLCL--FHWLRRGFRLCPSFITSQF--------TPALKSELKRRGIAR 121 +VEG N+R L L FI S+F T +KS K+ + Sbjct: 152 LGLKVEGNERNKRKALARISDLIHNTAFTSQFIKSKFLHYEVDFVTKEIKSLQKKHSLY- 210 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 F D+T FES +H L + + + Q + + +++ Sbjct: 211 -FTDET----------------FESLLLHTLLMVRRIKMKQPISLSPKEMAAVKK----- 248 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKR 240 E+Q + + P +E +++ L +V PL+ + + + L + + Sbjct: 249 KKEYQWTFACLQRLEPVFAIRFPEEEAVYLTLHILGGKVRYPLQTEENLENAVLPKVVGH 308 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+N EL + F+ +Q L + L HL L R + + + N + + ++YP L Sbjct: 309 LINRVSELKMMDFHKDQDLINGLNIHLNTVLQRLSYDLSVANPMLNDIKKMYPYLFHLII 368 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE--KQIILLTGNDSEREAQIEQQ 358 L + +H+ +EE+ + + F A + + E K+ +++ + + Sbjct: 369 DVLEDINQTFDLHIPEEEAAYLTLHFQAAIERMQGSSETHKKAVIVCHMGIGMSQLLRTK 428 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 + + + KA L+ + + + T+ L + P I L ++++ Sbjct: 429 IER-KYHQIAVMACIAKADLKDYIKKHEDIDLVISTIALENITVPHIVVSPLLEPGEEKK 487 Query: 419 IRKML 423 + + Sbjct: 488 LSAFI 492 >UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFF6_9BACI Length = 643 Score = 217 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 73/429 (17%), Positives = 152/429 (35%), Gaps = 48/429 (11%) Query: 6 APPSVLSAPQRRCQILL-TLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQL 64 S L++ + R ++ L T T+ +E + ++ + L ++L Sbjct: 83 PEDSSLNSQKGRIGFIIDRLINSEETYTLDDLAEEMHLGRTTLVNELKKAAVS-LETYKL 141 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 + + + G L+ R + L + ++ Sbjct: 142 IIHGKPNRGMELSGRELDLRFYILDHLY------------------------DVLYGDYP 177 Query: 125 DDTNLQALVNLCSRRLQKR--FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 D ++ + S + R + F+ + L L HH + + + Sbjct: 178 LDEDITESIERISHEYNLESPTQERLMEFIIIMLDRLLKNHHLEAIEE----KHKKLIGT 233 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 E +A EI Q++ +P E LF+ + + R P R D + ++RL+ Sbjct: 234 QEHGIALEIVEAIQKQLPIEIPEAEALFITIPIAGRRTPTNNRTLA--DIAITDDVRRLL 291 Query: 243 NHFRELGNVR---FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 E + + L HL LNR +F + + N L YP + Sbjct: 292 EQILEQVGFKKEIIEQNESFFQDLLYHLTFMLNRLIFGLRLKNALLANVKEKYPVAYKMA 351 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQE----NDLHEKQIILLTGNDSER--EA 353 + ES YG+ + ++E G +A FG ++ Q + ++ TG + + Sbjct: 352 EISGQVIESRYGLEVPEDELGYLAFYFGVFIGQSDIKVKRFQKAAVVCGTGRGTAKLVSI 411 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 Q+E+ L + T + L + +VK L + L+ + +P +P ++ ++ + Sbjct: 412 QLERILNQDTEINLFAEKDAVKEVLDS-----YDLVFSTVKLPFETHAPFIMINEIFDES 466 Query: 414 HQQEQIRKM 422 + +I K Sbjct: 467 RVKREIEKA 475 >UniRef50_C6J1G7 PTS system IIA 2 domain-containing protein n=2 Tax=Bacillales RepID=C6J1G7_9BACL Length = 697 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 67/416 (16%), Positives = 146/416 (35%), Gaps = 26/416 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LSA +R I+L + ++ F+ GV + D+ I H L + Sbjct: 87 LSAEERANLIILMMLSKNEELSLFHFTHALGVSKNTILRDLKNAQDAISPLH-LEIKYSR 145 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFR-LCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 Y +EG NQR L + + + A S++ L Sbjct: 146 MHGYYIEGNEFNQRQALIDIVHKTLETYGGENWLRELAGAAPSQV------------AAL 193 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + + +L +F + + L L + G + + E++ + Sbjct: 194 RRKIEAVESKLNLKFTDEKLESMPYILLLLLRRVKQGRVVEGFHIHYDELSDTKEYRAVE 253 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 E+ + P+P +E +F+ L + + +L +++ +++ F Sbjct: 254 ELLSELE-----PIPMEERMFITLHLLTTNISSTDYLSDDTLPELNRALSEMLSQFERNA 308 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 V D++ L +++ HL A R + + I N L E ++ + L + + Sbjct: 309 CVTLQDKEQLHNKILLHLKPAYYRIKYRLSITNPLQESVSKEFKELHHLVKKSCGPLVEL 368 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 G + + E+ + ++ G W ++ D + + +++ +E LREL + Sbjct: 369 IGAEIPESETTYLTMLIGGWCTRQGDSIRQKIRALVVCPKGVCVSRLLESTLRELFPEFV 428 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +SV+ F ++ + +P L L + ++RK + Sbjct: 429 FFDALSVREFH--NYALEYDVVFSTVYLPTDKK---LFLIKTFLGKEDRYRLRKQV 479 >UniRef50_Q5WJ14 BglG family transcriptional antiterminator n=2 Tax=Bacilli RepID=Q5WJ14_BACSK Length = 678 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 80/417 (19%), Positives = 148/417 (35%), Gaps = 31/417 (7%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 +S R + L F + + GV + A D+ T REI L++ Sbjct: 86 ISKEDRVYLLYLYTFIRKEPISNFHYQTFLGVSKNTALEDVKRT-REICEEWNLSMIYSR 144 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G ++R R + S F L +F ++T Sbjct: 145 KDGYYLIGDEFDKR-------RLALYAVNILLDSPFGNELIHLPLNDWGYDDFIEETE-S 196 Query: 131 ALVNLCSRRLQKRFESRDIHFLC-LYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + + +SR L L ++ P+ + E +E Q A Sbjct: 197 VFAEVVKKHSIMLVKSRKNEILPFLTYLRARKKYANLNFPE-------YQEHIIERQNAF 249 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 G+ E F++L+ + ++++ + L Q +R++ F + Sbjct: 250 LAGKEMAETFFGKEAVSEQYFVSLMLLI-----SMQESKYENALLEQLAERIIEEFERVT 304 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + + + L LY HL A R F I + N L YP L + ALA Sbjct: 305 LLPLENRETLKKSLYDHLVPAFFRISFKIPLVNPLINRIKEEYPELFEFVKIALAPLSMW 364 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTLLPLN 368 G +S+EE G + FG +L ++ H +++ N ++ QL+E+ N Sbjct: 365 TGQVISEEEIGYFTLHFGGYLEKDKRNHSTVNGLIVCSNGVSSSLMLKAQLKEMFP---N 421 Query: 369 IKHMSVKAFLQ-TGAPR-GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I ++V + Q T P+ LI + +P P+ L+ ++ + + + Sbjct: 422 IHFLNVHSIDQMTEIPKSSYDLIFSTVRVPST---KPVYLVKPLLSQVEKNYLIQEI 475 >UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJT4_9FIRM Length = 705 Score = 210 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 74/433 (17%), Positives = 146/433 (33%), Gaps = 23/433 (5%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 + + QR+ + L Q + + + + V D S D+ + L+ L L Sbjct: 83 ETAAYTPQQRQIILAGQLLQATEPIKLFSLASMLKVTDGTVSHDLDKLES-WLKQRGLLL 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFR--------LCPSFITSQFTPALKSELKRRG 118 V+G+ + R L L P T + A + L + Sbjct: 142 VRRPGLGAYVKGSERDIRRALVEILYTNLDEERLLQLFHDPEQGTHKGAGAAEQYLLKLV 201 Query: 119 IARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + +L+ LV+ L L ++L + + + Sbjct: 202 DKQMI---HDLEQLVHEVESGLPHHLSDTAFIGLVVHLSLAIQRMRKKEDIHIDTATLAA 258 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ----RDRQL 234 E+++A+E+ R + VP DE ++ + R D + L Sbjct: 259 LRKRREYRMAKELARRITAQFQTEVPEDEIGYITMHLMGARSFYRKGDDEVVSVMDNFHL 318 Query: 235 RQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPR 294 + + ++ ++ + D + L L HL +++R + I N L EE YP Sbjct: 319 VRMARSIMKCAQQETGRKLLDNKELFLGLVNHLGPSISRLRMHMDIRNPLLEEMRSAYPE 378 Query: 295 LVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSERE 352 L+ A+ E E G L + E +A+ GA L + + + ++I+ Sbjct: 379 LMELAGKAVKPMEQELGEALPEAEVAYIAMHLGAALAEPHSASRQHVRVIVACQTGMGTS 438 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFLQ--TGAPRGAALIIAPYTMPLPLFSPPLIYTDLT 410 + L I+ + + + LQ + T+P+P P++ T Sbjct: 439 RMLAA---GLKQAYDTIEIVDLVSALQVNREYVQHTEADFVISTVPIPWSPLPVVVTTPL 495 Query: 411 LTTHQQEQIRKML 423 L + +I + L Sbjct: 496 LDQRDKARIDQEL 508 >UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQ92_CLOB8 Length = 641 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 80/427 (18%), Positives = 161/427 (37%), Gaps = 53/427 (12%) Query: 11 LSAPQRRCQILLTLFQ----PGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 L++PQRR +L P LT +A E+N V D+ + REIL + L + Sbjct: 87 LNSPQRRMAFILYKLMNSEEPYLTDDLA--CEMN-VGRTTVISDLKK-MREILNNYDLKI 142 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + ++GT LN R + L I ++ D Sbjct: 143 IGKTNNGLALKGTELNIRFLVLENLYE-------MIYGEYEL-----------------D 178 Query: 127 TNLQALVNLCSRRLQ---KRFESRDIHFLCLYLQYCLLQHHAGI-TPQFNPLQRRWAESC 182 ++ LV + + Q FES IH L + L L H + ++ L R W Sbjct: 179 EDVIDLVKEITDQYQFDTTTFESF-IHSLVVTLDRLLNGHTINTLSEKYGELLRSW---- 233 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR---DRQLRQSIK 239 EF + I ++R +P E +F+AL + P + ++ + Sbjct: 234 -EFTLVNTISDAVEKRLTISIPIKERIFLALPIIGMNTPTNIEGISPHVEITEEVSNLVN 292 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 ++ + + + L D +Y H+A +NR + + I N + +E + Y + Sbjct: 293 HILERIKYDMGLNITLDDILKDFVY-HMAFLVNRLKYGVHIHNPIVDEIRKKYKVAYKMA 351 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWL----MQENDLHEKQIILLTGNDSEREAQI 355 A E V ++ +E G +A FG ++ ++++ +++ +I TG + R + Sbjct: 352 ELARDVIEKSLDVKMTQDEVGFIAAYFGVFISEQQIEKSKIYKVAVICGTGRVTAR--LV 409 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 QL+ + I + + + + L+++ + + + Sbjct: 410 ASQLKGIFDANTVI-DLYSDSTVTSEILDKYNLVLSTVQANFKTTATVIYLEKIFDEEAL 468 Query: 416 QEQIRKM 422 +++I+ + Sbjct: 469 KKRIKSI 475 >UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=Thermoanaerobacter RepID=B0KCF7_THEP3 Length = 652 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 66/432 (15%), Positives = 161/432 (37%), Gaps = 20/432 (4%) Query: 5 LAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQL 64 L S R+ IL LF + T +E V D+ + + +++ L Sbjct: 80 LDFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSRVTIHKDLQSVEKWLNKFN-L 138 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWL--RRGFRLCPSFITSQFTPALKSELKRRGIARN 122 L + V G N R + + + + F+ + +T + + Sbjct: 139 KLLKKPNYGIEVVGDEENWRNAVASLIVSTKEQKELKEFLYNDYTGRIDYRTLMQLRELF 198 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 D L+ +V+ +L+ RF L +++ + + + + + Sbjct: 199 DIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLKHKKDVKLSKAVLNNLKQK 258 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK--- 239 E+ +AQ++ + + + +P E ++ L ++ + + + +SI+ Sbjct: 259 DEYVIAQQMAKEIEAKFNVVLPESEIGYIVLHIIGTKMQQNKIEDVNLELEDEESIELAV 318 Query: 240 ----RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 ++N ++ +++ L + L HL +NR + + + N L + YP + Sbjct: 319 IMSKEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYGLTLRNPLLNDIKENYPEI 378 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSE--REA 353 FE G +++EE G +A+ GA + + + ++ TG + A Sbjct: 379 YGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAAVERAKKPLKALVVCTTGIGTAQLLAA 438 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 ++E+ +++ IK + L ++I+ + + + P I LT Sbjct: 439 RLEKSFKQIE-----IKDIVSSVSLHESILNDIDIVISTVPIEI---NKPFINISPLLTQ 490 Query: 414 HQQEQIRKMLES 425 + +++ + +++ Sbjct: 491 NDIKRLDEFIQA 502 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 47/368 (12%), Positives = 118/368 (32%), Gaps = 30/368 (8%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R +I+ L T+ + V + D+ + E ++ + + Sbjct: 2 DRILEIINMLLNSEQPLTVDYIANTLKVSNKTIRNDLKK-AEEFVQQKGVKIIKKPRVGI 60 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 +EG N++L L +++ P K + R F ++ Sbjct: 61 VLEGP-RNKKLELVDEIKKSLDFEE--------PFSPEARKNYILKRLFMSKGSVTTKEL 111 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHA--GITPQFNPLQRRWAESCLEFQVAQEIG 192 + + +D+ + +L L+ + + W + V+ + Sbjct: 112 AEELYVSRVTIHKDLQSVEKWLNKFNLKLLKKPNYGIEVVGDEENWRNAVASLIVSTKEQ 171 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + + + L+ LR+ D + ++++V++ R Sbjct: 172 KELKEFLYNDY-TGRIDYRTLM--------QLRELFDID---YKQLEKIVSNAESKLKFR 219 Query: 253 FYDEQGLCDQLYTHLAQALNRSLF--AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 F DE + L H+A ++ R + + + + + E+++ Sbjct: 220 FSDEAFI--SLVIHVAISIERLKHKKDVKLSKAVLNNLKQK--DEYVIAQQMAKEIEAKF 275 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 V L + E G + + MQ+N + + + L E + +++ + L++ Sbjct: 276 NVVLPESEIGYIVLHIIGTKMQQNKIEDVNLELEDEESIELAVIMSKEIINIAERALSLD 335 Query: 371 HMSVKAFL 378 + K L Sbjct: 336 LSNDKQLL 343 >UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan operon n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKS9_BACSK Length = 649 Score = 204 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 67/420 (15%), Positives = 148/420 (35%), Gaps = 21/420 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 + +S +R ++ L + ++ + D+ + IL + L + Sbjct: 94 GAPISPEERVTWLIQKLLLAEEYIKLDDLADDLFISKSSLQNDLKN-AKLILARYGLQVA 152 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 T + ++G L +R C+ ++ + + Q T +K E Sbjct: 153 TRPNYGLYLKGDELKRRFCMAEYVFERKNVAADLTSLQLTAFMKEEQL-----------A 201 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++ ++ + I+ L +++ + AG S E+ V Sbjct: 202 DIWDILVTTMQENGVTLSDIAINNLFIHIVIAFKRIEAGHHISLYRKDMSDICSQHEYYV 261 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-----DRQLRQSIKRLV 242 AQ++ P E ++A+ R+ A+ D + + K +V Sbjct: 262 AQKMIARLNTHLGVSFPEMEIAYIAIHLLGTRLVAENEQANDNLKKVFDDEYYKLAKAIV 321 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 ++ ++Q L L HL A+NR + + I N + + + Y Sbjct: 322 EKVERELDLNIANDQELLVSLMLHLKPAINRYRYGMNIRNPMLADIKQHYTLAFEAAVIG 381 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREAQIEQQLRE 361 A + + G+ + + E G +A+ GA L + N E K+I+++ + ++ +L Sbjct: 382 QAVIKDKLGISIDENEIGYLALHIGAALERRNQQKEPKRILIVCASGRGSAQLLKYKLEA 441 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSP-PLIYTDLTLTTHQQEQIR 420 L I + + Q + + ++P+ P P++ + L T E+I Sbjct: 442 NFKKRLFI--VDTTEYYQIDQADLTNIDLIVTSIPIKKKMPVPVVEVNTILGTEDLERIE 499 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 95/326 (29%), Gaps = 44/326 (13%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 QR IL L T + +N V D+ + E+ H + + Y Sbjct: 13 QRLQSILRELLGTQGYVTSRYLASVNQVTPRTVREDVKQLQTELANIHA-GIESVPGKGY 71 Query: 75 RVE-GTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 ++ R +L+R + P E I + + ++ Sbjct: 72 KLTIEDEAQFR----QFLQR------ETTGNHGAPISPEERVTWLIQKLLLAEEYIKLDD 121 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 + K D+ L L LQ P + + G Sbjct: 122 LADDLFISKSSLQNDLKNAKLILARYGLQVATR--PNYGLYLK---------------GD 164 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 +RR E +A + L++ +++ QL LV +E V Sbjct: 165 ELKRRFCMAEYVFERKNVAADLTSLQLTAFMKEE-----QLADIWDILVTTMQEN-GVTL 218 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGI---DNTLPEEFARLYPRLVRTTRAALAGFESEY 310 D + L+ H+ A R I + + + + +A + Sbjct: 219 SD--IAINNLFIHIVIAFKRIEAGHHISLYRKDMS-DICSQHE--YYVAQKMIARLNTHL 273 Query: 311 GVHLSDEESGLVAVI-FGAWLMQEND 335 GV + E +A+ G L+ EN+ Sbjct: 274 GVSFPEMEIAYIAIHLLGTRLVAENE 299 >UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D9V5_GEOSW Length = 661 Score = 203 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 76/432 (17%), Positives = 155/432 (35%), Gaps = 23/432 (5%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 M PP R+ Q++ L TM +E V + D+ E + Sbjct: 82 MEETNPPQEY----RKLQLIKILLTEDKPVTMQQLAEQFYVSKSVIQYDLEEIEHWLQ-S 136 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 L L +VEG+ R L RL F+ + +LK Sbjct: 137 FGLVLIRKPHLGIKVEGSEKAWRTALS-------RLIELFVDHSYYILDSKQLKLIEDVL 189 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 Y+ T ++ + L+ + + L +++ + + G + Q + + Sbjct: 190 KPYELTLIEKEIRKMDEWLEFPLTDQSVISLTIHIAIAIKRIKKGHRIHIDTNQLQELQK 249 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLR------ 235 E+++A+++ + ++ +P E ++ L R+ + QL Sbjct: 250 KPEYKLAEQLAKQIEQWVAVKIPKAEIGYITLHLLGARLRYDQVHEKEDIEQLLTKMDYE 309 Query: 236 --QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 Q +K L++ + R ++ L L H LNR + + N L ++ ++Y Sbjct: 310 ALQIVKELIHDISLCTDERLRKDKELLLGLTIHFHSTLNRLRNGLAVKNPLLKDIKQMYR 369 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSERE 352 + + E + V + ++E + + A L + + +EK + I++ S Sbjct: 370 YSFEMVLSLIPKIEKKANVAIPEDEIAYIVLHIQAALERMQNKNEKIRTIIVCATGSGTS 429 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLT 412 IE +L I S+ +T A L+I+ T+PL P+I L Sbjct: 430 RLIEAKLSTTFPKLEIIAVTSMAKLHETIATTQPDLLIS--TVPLEHPKIPVITVSPLLP 487 Query: 413 THQQEQIRKMLE 424 + + + + +E Sbjct: 488 KKELDILEQWIE 499 >UniRef50_Q8NYI2 MW0220 protein n=49 Tax=Staphylococcus aureus RepID=Q8NYI2_STAAW Length = 698 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 76/415 (18%), Positives = 147/415 (35%), Gaps = 24/415 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S RR ++L LF ++ FS V + DI+ +E L H L+L Sbjct: 88 FSIETRRYYLMLMLFSKENAMSLNHFSIDLQVSKNTVIHDINHV-KEQLENHGLSLKYSR 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G R R I + + + + D + Sbjct: 147 KHGYEIVGDEFEVR-----------RFFIKLIDQRLNHDITKSEVLKALNLTLEDIAYQK 195 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + + L+ RF + + L L + +G + ++ E+Q A E Sbjct: 196 DKIKQVEQFLKSRFIDKSLSSLPYVLCVIRRRIQSGHVMNPLNINYQYLRDTKEYQ-ATE 254 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I + +P E L++ L V L +I ++++HF ++ Sbjct: 255 IMTQLE----PDLPEAEKLYLTLHLLSTSVQWTDLQESDNISNLTMAIAQMIHHFEQITF 310 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + D++ L QL HL A R + + + L Y L + + + Sbjct: 311 INIEDKEKLSQQLLLHLTPAFYRIKYNLTDRDELINPLQGNYQSLFHMVKQSCQSLTEYF 370 Query: 311 GVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 G L D E + ++FG L + EN + + I++ + + +LR L + Sbjct: 371 GKSLPDNEIAYLTMLFGGSLRRQDENFDGKIKAIIVCTQGTSVSQMMLYELRNLFPEIIF 430 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S++ F ++ +P L L T + L+ ++Q ++RK + Sbjct: 431 LDAISLRTFE--NYTLDYDIVFSPM---FVLTHKKLFITKVALSENEQRKLRKEV 480 >UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR family n=5 Tax=Geobacillus RepID=C9RTD1_GEOSY Length = 696 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 73/429 (17%), Positives = 160/429 (37%), Gaps = 27/429 (6%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 + +R+ I + L + + + + V SLD+ + + + + L+L Sbjct: 85 HEYTPEERQLMIFIALLEANEPVKLVSLATDLNVTVATVSLDLDKVEQTVE-AYGLSLIR 143 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 + G+ +R + L R +F +K +++R A Sbjct: 144 KRGYGVELAGSESAKRRLMSDLLFRHVD------EHEFLALMKETIQKRADAPLDTVAEK 197 Query: 129 LQALVN-----LCSRRLQK-----RFESRDIHFLC--LYLQYCLLQHHAGITPQFNPLQR 176 L LV+ + +++++ F D ++ ++L + + G F+P Sbjct: 198 LLGLVDRKKLSIIEQQIERVKEKLPFTMADSSYIAFVVHLALAIERIKQGEAIHFDPRDL 257 Query: 177 RWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-DRQLR 235 + ++ E+++A+ + +R +P +E +M + + + + Sbjct: 258 QALQATKEYEIARVLAESLERAFGIDIPNEEVGYMTMHLMGAKWRSRQGAMMEEPSLAVG 317 Query: 236 QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 ++L+ + V ++ L + L HL AL R +G+ N L ++ + Y L Sbjct: 318 MKAQQLIRFVSDKLGVDLSTDRTLYEDLVVHLKPALYRLEHGMGVANPLLDQIKQDYAEL 377 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQI 355 + + DEE G + + F A LM+E +++++ + + Sbjct: 378 FAIVADGARQL--FGDIPVPDEEIGYLVLHFAAALMREKKGW--RVLVICSSGLGTAKML 433 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 +L+ +P + AF G A ++ T+PLP P I LT + Sbjct: 434 ATRLK--KEIPDIVSLEQASAFEWRGKDVSAYDLVIS-TVPLPEEYGPHIVVSPMLTEEE 490 Query: 416 QEQIRKMLE 424 +IR+ LE Sbjct: 491 ARKIRECLE 499 >UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8I8_BREBN Length = 701 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 68/425 (16%), Positives = 149/425 (35%), Gaps = 14/425 (3%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 +A +R+ IL L + + + + V S D+ + +L + L+L Sbjct: 86 EYTAQERKAIILCALLEASEPVKLISLAIDLKVTTATISHDLDDLET-MLARYDLSLLRK 144 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFR------LCPSFITSQFTPALKSELKRRGIARNF 123 ++GT ++R + + + I ++ + S +R + Sbjct: 145 RGYGVELQGTESSKRRAISRLIAEHLDDHELIGIIKENIQNKALRDIDSIAERLLGLIDR 204 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 ++ ++ L L +L + + G F+ Sbjct: 205 EKLIKVENALSHLDEELPYPLADSAYLGLVTHLALAMERIEKGEGIHFDEHTLSELNGTP 264 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQRDRQLRQSIKRLV 242 E+++A I ++ +P DE ++ + ++ P + +L KR + Sbjct: 265 EYEIASNIMERLKQIFQMEIPADEIGYITMHLRGAKLRHSPDDQVWPENTELMVITKRFI 324 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 E ++ ++ L L THL AL R + I N + E+ + YP L T A Sbjct: 325 QACEERLDIPLSNDASLFHGLLTHLEPALYRLQRKMEIRNPILEQIKQNYPELFAVTSEA 384 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREAQIEQQLRE 361 + + + DEE G + + GA L + + + +++ + + +++ Sbjct: 385 VHTI--LPELRVPDEEIGYLVMHLGAALERTRHEQQWYRALVVCSSGIGSSKILATRIK- 441 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 +P + ++ F P +I T+PLPL + L ++I+ Sbjct: 442 -KEIPEIVSLKNLSMFDLEEVPATDYDLIIS-TLPLPLDPAEYVVVSPLLPPDDIQKIKY 499 Query: 422 MLESA 426 L + Sbjct: 500 QLHTT 504 >UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY31_9BACL Length = 650 Score = 198 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 66/425 (15%), Positives = 138/425 (32%), Gaps = 28/425 (6%) Query: 5 LAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQL 64 + P + +R + L T+ ++ + + D+ R+ L L Sbjct: 85 IKPKEQETEEERLIAVAYRLLMETKPVTIQELADKHYTSKTVIKKDLDAL-RDWLAKWDL 143 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 + + +EG ++R L + +FI +F P + Sbjct: 144 IVVSKQKVGVLIEGKERDKRAALSKLSQLTGEAGQAFIKDRFAP---------------H 188 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 + + + Q F L ++ + + F+ ++ + E Sbjct: 189 ELDIVTRELKQLELDAQLAFTDEAFDNLLIHTLLMIRRTKLKQPITFSEQEKVFVRGKPE 248 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLR--------VPDPLRDAHQRDRQLRQ 236 F+ R +R P DE ++ + +P D ++R Sbjct: 249 FRWTGAFIRKLERFFAVRFPEDEVAYLTAHILGGKIRSRARIETAEPGADPSAETAEVRG 308 Query: 237 SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 + LV L + F ++ L + L HL LNR + + + N + ++ R+YP + Sbjct: 309 LAETLVRKMSALTWMDFGQDEALMEGLRIHLYSTLNRLSYGLTVSNPMLQDIKRMYPYMF 368 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQ 354 A Y + +EE + + F A + + + K+I+ + Sbjct: 369 DMVIYATRELSEGYPFTIPEEEVAYLTLHFQAAVERLSQPAEGRKRIVTVCHMGVGMSQI 428 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 + +L P SV+ G ++ T+PL + P I L T Sbjct: 429 LRSKLER--KFPELHVLDSVRKADLPGYLAHHSVDFIISTIPLENVNVPYITVSPLLETG 486 Query: 415 QQEQI 419 + ++I Sbjct: 487 ETQKI 491 >UniRef50_UPI0001C35E6F mannitol operon transcriptional antiterminator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35E6F Length = 695 Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 143/418 (34%), Gaps = 37/418 (8%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 + + +R I+ + + V + +D+ + L +QL L Sbjct: 88 DDYIFTPSERTRMIVCQIIVSREPVYVENLMNTCLVSRNTIFVDLQAVISQ-LHAYQLGL 146 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 Y ++G + R F + L+ L + + D+ Sbjct: 147 GYEKKRGYWIDGDPIRIRAIFFLYF----------------NMLEPLLSSGKLRFLYLDE 190 Query: 127 TNLQ-ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 + ++L + D+ L L + + + + + E+ Sbjct: 191 MEFHLKQIEQVEKQLGVSYVRNDMLALAAMLPVMEKGEDSLYFTDVSTEKVKVS---KEY 247 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ--RDRQLRQSIKRLVN 243 Q+ E + E ++++L F R+ R + + K L+ Sbjct: 248 QLVME--------YFPTLSDMEKVYLSLHFLGGRLESYSRTEADTGDNEFALEITKNLIT 299 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F V F ++ L LY H+A +L R F I I N + E+ R YP + TTRA + Sbjct: 300 EFEREACVLFERKEDLIRNLYRHIAASLYRYRFGIQIGNPMAEDIRREYPYIFDTTRAVV 359 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLM-QENDLHEKQIILLTGNDSEREAQIEQQLREL 362 E + GV +SD E +A+ FGA L E D E +I++ N I +L+ + Sbjct: 360 KYLEQQIGVLISDSEVAYLALHFGAHLEYAERDEKELRILVACMNGVATGNMISHELKRI 419 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + M+ + P+ II P+I + L ++ I Sbjct: 420 LPQARIVAVMAASEIVN---PQNMCDIIITSV--HVKAVVPVIVVNTILNDFDRKNIL 472 >UniRef50_B9Y618 Putative uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y618_9FIRM Length = 466 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 139/354 (39%), Gaps = 22/354 (6%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 + + R QI + + T+ F + + + A + + ++R L L + Sbjct: 130 SHEERLQISILILLGMPDVTLNHFVSILEISKNTALSTLKQLQI-LIRRFNLELRYSREF 188 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 Y + G N+R L L S I +P L L+ R + D L Sbjct: 189 GYLLTGREFNRRQLLSEAL-------NSVINQLESPRLNRILQIRP-EQIQTLDRQL--- 237 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 NL ++L+ RF + + FL +L + G + + E++VA+++ Sbjct: 238 -NLIEKQLKIRFTDQVMKFLPYFLTIVFRRIQQGQIIEDFEVSAHSFRHTREYEVARDLL 296 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + P +E L++ LL + +D + S+ ++ F + +R Sbjct: 297 SNVN-----TCPDEEYLYLTLLLLTSNFRFMSDNHDAKDMDIYLSVYEMIEAFETVSCIR 351 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 F ++ L D ++ H A R L+ I+N + E Y L TR ++ E Sbjct: 352 FNHKEQLVDYIFQHWKAAYYRILYDFHIENEMLEAIKNRYTYLFDLTRRSIYPLEKTLNK 411 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHEK----QIILLTGNDSEREAQIEQQLREL 362 + +EE G + +++G WL +E + + + I + N + + +L++L Sbjct: 412 PIPEEEIGFITILYGGWLRREKQMDQAAANPRAIFVCENGVAISSYMYLELKDL 465 >UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFG3_9BACI Length = 645 Score = 194 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 69/430 (16%), Positives = 150/430 (34%), Gaps = 25/430 (5%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 ++ +L + +R ++ L G T+ ++E V + D+ E + L Sbjct: 80 ILQSLFSDDSKTMEERLFEMAFQLLTSGNAITLKYWAERYFVPNASLKKDL-EVIAQWLE 138 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 L L + + +EGT LN+R L H L PS + P L + Sbjct: 139 RFDLLLVSRQRLGHLIEGTELNKRNALAH----LSGLIPSGGIGK-NPVL-------DLF 186 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 + + D ++ + RF + L ++ + + P + Sbjct: 187 QPYEIDI-VRKALKEIQNNESIRFTDEALDSLVVHALIMIKRTRQRAPVFVEPAEMEKIA 245 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 E++ A P E ++ F + + A +D + ++ Sbjct: 246 LRKEYEYASAFFTRLADSFQLSFPEAEIVYYTWHFISAKRSEEAESALIQDEKAEHVVQL 305 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+ +L F ++ L L H+ ++R + I N L R+YP + Sbjct: 306 LIERMEKLTLFPFGNDHILASGLAVHMHSVISRIHYGFPITNPLLANIKRMYPYMFSMVI 365 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQ---ENDLHEKQIILLTGNDSEREAQIEQ 357 AL + + + ++E+ + + F A + + + ++ +K+ I++ +E Sbjct: 366 LALDDIREGFHISIPEDEAAYIVLHFQASIERLEGKRNIEKKRAIIVCHMGIGMSHLLEA 425 Query: 358 QLRELT---LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 ++ + + I V L+ P II+ T+PL I Sbjct: 426 KIEQQYAAIEIAACIGKAEVAEALEKHHP---DFIIS--TVPLEKAGTGYIQISPLFGQE 480 Query: 415 QQEQIRKMLE 424 +E++ + ++ Sbjct: 481 DKERLSQFVD 490 >UniRef50_Q65NB6 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65NB6_BACLD Length = 683 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 65/411 (15%), Positives = 144/411 (35%), Gaps = 24/411 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 + +R + + LF + A ++L V + D+ + E L + + Sbjct: 87 FTQEERIKALYMFLFVRREPISSAHLTQLLQVSKNTVMNDVKK-ANEALTPFLVAIKYTR 145 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G+ ++R+ + H L SF+ + + + + +R+ + + Sbjct: 146 QRGYHLIGSEFDKRVPVMHHLS-------SFLQKPYGKEILHYILKISGSRD-HKQQEFK 197 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 V L S+ + ++ +L ++ G +F+ + + A Sbjct: 198 RAVELVSKEYGLQLVEERLNEFIYFLMMYSIRVAEGKIVRFHQEEGELLKQSPLKNAAVR 257 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + + PV E ++ + L L Q ++LV F Sbjct: 258 LVNELR----IPVHETELCYILIQLLGL-----SFGQQPAHDPLYQLCEKLVFEFESRAC 308 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F + + + LY HL A R + I I N L + + + L + + E+ Sbjct: 309 ITFPRRREVAESLYRHLKPAYFRMKYRIPIHNPLLSKIKKEHKELFTIVQKLMRHLEALL 368 Query: 311 GVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 + +EE G + + FGA L Q ++ +K +++ + + +QL L + Sbjct: 369 NKPVPEEEIGFITIHFGALLEQPVQSGSSKKTAVVVCPSGVSSSLMVRRQLESLFSEIVV 428 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 K MS++ F P A ++ +T ++ ++ Sbjct: 429 EKAMSLQEF----TPDVFDHYDAVFSTVELKTKKRYYMVRPLMTPAEKSRL 475 >UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVY0_ALKMQ Length = 705 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 56/427 (13%), Positives = 138/427 (32%), Gaps = 16/427 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 + +R+ I L Q +++ V + S D+ + E + + L L Sbjct: 91 FTPQERQTIIASELLQANEPIKFYYLTKILNVSEGTISHDLDKLE-EWVDIYNLQLIRKP 149 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRG------FRLCPSFITSQFTPALKSELKRRGIARNFY 124 + G ++R + + + IT + E+K R N Sbjct: 150 GLGVYIAGREKHKRRAIINLIYENVEEKQLLSFIQENITKSPEISGSIEIKTRNRLLNLI 209 Query: 125 DDTN---LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 D L+ L+ + + + L ++L + + + Sbjct: 210 DKETIRTLEGLIYIAEEEMGYKLADSAYVGLIVHLALAIKRIKNNEIIIMDKEFLNELNQ 269 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR---QLRQSI 238 EF +A+++ + + DE ++ + + + +L + Sbjct: 270 NPEFIIARKLALNLSDFFNIDIHEDEIGYITMHLMGSKNRGNVTKNETSTIGSFELVKLA 329 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 + ++ + + L L HL A+ R + I N L +E YP L++ Sbjct: 330 REMIKIAEAETGSFIGNNEKLLTGLVNHLEPAIKRIKMKMDIRNPLLQEIKTRYPHLIKV 389 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIE 356 + E G + + E +A+ GA + ++ ++ + + + Sbjct: 390 SSKCAKVLEDYLGQKMPESEIAYIAMHLGAVIEKKEIMPQIRFRVAVACPSGIGTSKLLA 449 Query: 357 QQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQ 416 ++ + +++ + L+ + + T+P+ S P+I + L + Sbjct: 450 TRIEK-EYDNMHVVGIISSFRLEESWLKQEEIDFIISTIPIEKSSIPVIKVNPLLLDEDK 508 Query: 417 EQIRKML 423 I + + Sbjct: 509 YHIHQSM 515 >UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Clostridium RepID=A6LX09_CLOB8 Length = 714 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 61/421 (14%), Positives = 143/421 (33%), Gaps = 19/421 (4%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 M + V+S +R I+ L + T+ + +E V + D+ E + +L Sbjct: 79 MESINSYDYVMSQKERIIYIIYKLLEKNSYLTINSLAENMFVSRGTINNDLKEVRK-LLE 137 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 + + L + + G N R + + + I F K Sbjct: 138 GNNIKLQSEKSKGIKAIGDEKNLRKVVSNLMLENVA-DSDLIGVNFKKLFKD-------- 188 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 D + ++ +L+ + L +++ + + + + + Sbjct: 189 ---MDIEFIGNVIKTAEDQLESTLSDYSFNNLLIHIAIAIKRIELAKDIVMDDNELKNLS 245 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 EF +A + R + R +P E +M + V + + ++ Sbjct: 246 KTCEFSIASAMARMLENRYDIKIPKSEIGYMTIHLLGSNVML-KEEKNDDLVYIQLISAT 304 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L++ + F ++ L + L H+ + R + I+N L +E Y + Sbjct: 305 LISEVGKRTKYNFEADEHLLEGLIQHIRPMIYRLKHGVSINNPLLDEIIYKYKEVFTLVE 364 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQ 358 +L E + +S EE G + + F A L + +L++ +++++ + + + Sbjct: 365 ESLIFLEKDLNAEISKEEIGYITLHFMASLERIKNLNKIKPRVLVVCATGAGTSKFVSIK 424 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 L+ + + + I +S + LII + + I LT + Sbjct: 425 LKSIFDINI-IDTVSSHDIEKIAKREPIDLIITTIPINIIGIR--CILVSPFLTEKNISE 481 Query: 419 I 419 + Sbjct: 482 L 482 >UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_LISW6 Length = 638 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 73/418 (17%), Positives = 143/418 (34%), Gaps = 31/418 (7%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + A R I+ L + +E V +LDI E R+ L+ + L + Sbjct: 95 PMFAEDRTDYIIRYLLLNNDYVKLEKLAEELFVSKSTINLDILEVKRK-LKENGLKVEKR 153 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 R+ G + R C +L + + RNF+ + NL Sbjct: 154 ASYGIRITGVEVAIRFCFSRYL--------------LVESANPLIT--DTERNFFSEVNL 197 Query: 130 QALVNLCSR---RLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + + + + + L +++ + + L+ S EF+ Sbjct: 198 EMIEQVVISNIAKYNIHMTDISVKNLIIHIAIAVCRVKDNCYVHVTDLE-DIEFSIPEFR 256 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 AQ+I + P E ++ L S + + + +++ + Sbjct: 257 AAQDIIKEIDLSEGIHFPESEISYLLLHLSSKNRKSDFNNYRE-----YIIVDKMLTKIK 311 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 EL F +Q + + HL A+NR F + I N + YP A Sbjct: 312 ELYGYDFKQDQKMISNIALHLKPAINRMKFNMNIQNPYLKNLKSNYPLAFELGLVAKDVL 371 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 E E +++ E G +A+ F L +E +++++++ + +E ++R+ Sbjct: 372 EQELKTKVNEAEVGYLAIHFLYGLDKEVVSDKQKVLIVCASGLGTSQLLESKVRKEFENA 431 Query: 367 L-NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 L I S K + Q+ G T+PL + P + LT I ++ Sbjct: 432 LDIIGVYSFKEYEQS----GTMCDFVISTVPLRMKLHPFVQVSPFLTKADIRNITALI 485 >UniRef50_C1I943 BglG family transcriptional antiterminator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I943_9CLOT Length = 715 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 58/420 (13%), Positives = 137/420 (32%), Gaps = 17/420 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S +R+ I+ L F+ L + S D+ + L+ + L Sbjct: 100 EYSKEERKRIIISELLISKDPIKSFYFTSLLKTSEGTLSNDLDSIE-DWLKSFNIKLVRK 158 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCP--SFITSQFTPALKSELKRRGIARNFYDDT 127 VEG + R L + L + + ++ + I + Sbjct: 159 PGLGVYVEGKENDYRKALTNILYETLEEKELINLLKGSLITNRENGIVEFSIENRLLNFI 218 Query: 128 N------LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + ++ +V+ + R L ++L + + + +P Sbjct: 219 DKSIIKAIEEIVSGLEKENDIRLVDSAYIGLVVHLSLAIQRIKNKENIKIDPDVLEELAK 278 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQ---LRQSI 238 EF++ + + R+ + + +P DE ++ + ++ + D +++ Sbjct: 279 LPEFEIGKMLVRNIESKFNIEIPVDEIGYITMHLKGAKLRLNSVSKLEEDIANLDIKRIG 338 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 K +V + N+ D++ L L HL A++R + I N L YP Sbjct: 339 KNIVEVVEKELNIFLKDDERLLKDLTNHLVPAISRLKMKLNIRNPLLNNIKEKYPMEYNA 398 Query: 299 TRAALAGFESEYGV-HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQ 357 T+ A + V + D E + + A + ++ + ++++ + + Sbjct: 399 TKKACEILKLNTKVDEIPDSEIAYITMHIAAAIYKKGLEEKIKVVISCPTGIGTSSLLAA 458 Query: 358 QLRELTLLPLNIKHMS-VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQ 416 L I +S + +I++ + + + I D L+ H + Sbjct: 459 LLEREFNNVEVIGTISAINIDEDKLKKDEVDIIVSTVPLDINFKN---ICVDPILSLHDK 515 >UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E24 Length = 691 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 76/427 (17%), Positives = 156/427 (36%), Gaps = 15/427 (3%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 P + P+R+ +L L + + T S V S D+++ + + ++L L Sbjct: 71 PVQEYTVPERKVYLLSMLLESSEPIKLFTLSNELKVTAATVSNDLNQLA-DWFKQYKLRL 129 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + G+ +R + + F F+ Q PAL+ R N D Sbjct: 130 IRRRGYGILLTGSEEAKRKAILSLIIGHFTDAELFMLIQGYPALRDRQARISPVSNKLLD 189 Query: 127 -------TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 + + + + L F + +YL L + G + + A Sbjct: 190 LIARDKLEMIDSALGEIDKELMAPFADTSYLYFMVYLALMLKRLELGQELSLDATSKEAA 249 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRD-AHQRDRQLRQSI 238 + E+ VA++I RH +P DE ++ P + + +L + Sbjct: 250 KRAPEYNVAEKIFRHIAETFGVELPEDEACGFTPYIKSGKLRKPSEEWIDAENIELSTLV 309 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 LV++ + + ++ L L +HL ++ R I + N ++ Y + + Sbjct: 310 YELVSYCEQKLHADLLSDRNLMQGLVSHLEPSIYRIRENIIVQNPYLDQIRSDYAHVYQI 369 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQ 357 A+ V + D+E G + + A L ++ LH+ + ++ + + Sbjct: 370 VEEAVHQV--MPQVKVPDDEIGFLVMHIAASLDNKHLLHKTFKGLVFCASGIGTSKMLAT 427 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 ++R +K++S+ Q P LII+ +P+ + LT + E Sbjct: 428 RIRNKIPELQVLKNVSIFELDQID-PGAFDLIISTVKLPIDASQ--YVLVSPLLTDGEVE 484 Query: 418 QIRKMLE 424 IR++LE Sbjct: 485 MIRRLLE 491 Score = 41.3 bits (95), Expect = 0.073, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 81/306 (26%), Gaps = 37/306 (12%) Query: 23 TLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLN 82 L + T+ ++ + ++ IL ++L L +EG+ + Sbjct: 1 MLLHREESITVEQIAKELDISPRTVHRELKAIET-ILDSYRLKLRKKTRVGLELEGSKEH 59 Query: 83 QRLCLFHWLRRGFRLCP--SFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRL 140 + L + P + + L S L + +N + Sbjct: 60 KDK-----LTQALLFTPVQEYTVPERKVYLLSMLLESSEPIKLFTLSNELKVTAATVSND 114 Query: 141 QKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRAL 200 + Y + + GI + +R + + Sbjct: 115 LNQLADWFKQ----YKLRLIRRRGYGILLTGSEEAKR---------------KAILSLII 155 Query: 201 QPVPPDEPLFMALLFSMLRVPDP--LRDAHQRDRQLRQSIKRLVN----HFRELGNVRFY 254 E + + LR +++ + + +++ + F Sbjct: 156 GHFTDAELFMLIQGYPALRDRQARISPVSNKLLDLIARDKLEMIDSALGEIDKELMAPFA 215 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGID-NTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 D L +LA L R + + +E A+ P +GV Sbjct: 216 DTSYL--YFMVYLALMLKRLELGQELSLDATSKEAAKRAPE-YNVAEKIFRHIAETFGVE 272 Query: 314 LSDEES 319 L ++E+ Sbjct: 273 LPEDEA 278 >UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS system IIA component n=8 Tax=Streptococcus RepID=B4U3Q3_STREM Length = 665 Score = 191 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 68/421 (16%), Positives = 150/421 (35%), Gaps = 16/421 (3%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTA-TMATFSELNGVDDDIASLDISETGREILRYH 62 LA + + R LL F + + + ++ R+ +R + Sbjct: 87 RLADVTQVEETVDREHYLLNKFFFEEPVWDFEELCQELYISRTTLNHVLA-VIRDRIRPY 145 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 QL L + +V G R + + F + F ++ + + + Sbjct: 146 QLQLDVSHQRV-QVTGKEEAIRHFIMDY----------FFATSFDDSMYAIVDNTFLDHI 194 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + D + +++ C R + + +H L L++ + + +G F + Sbjct: 195 KFADITI-IVLDEC-RDAKLKLSDFVMHNLVLHIALMVQRIRSGYPLAFFSIP-AAIRQS 251 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 E+QVA I + P +E ++AL + D ++ D LR +K + Sbjct: 252 DEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVDGSPQDNKADDLLRSHLKAGI 311 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 +L + + L L H+ R I + N L EE YP T+ A Sbjct: 312 VKASQLTGMSLEADSSLLQGLLAHMKPLATRLENHIQLTNPLTEEIKSKYPEAFALTKQA 371 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLREL 362 LSD+E +++ A + + ++ H+ +++++ ++ +L + Sbjct: 372 FENIPELQAYDLSDDEWAYISLHVMAAIERYSNRHKLRVLVVCATGYGSAMMLKNRLEKE 431 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 I + + + +II+ ++ +F P+I + L+ + IR+ Sbjct: 432 FEGRFQIVDVISYYEITQERLQTVDVIISSISLANVMFLTPVITVSVFLSDQDIKAIRQF 491 Query: 423 L 423 + Sbjct: 492 I 492 >UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5P5_9FIRM Length = 720 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 57/429 (13%), Positives = 150/429 (34%), Gaps = 23/429 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L+ R I++ L T+++ +E V + + + E + + + Sbjct: 89 LTEEDRFNYIIIKLLTANNPITISSIAEELYVSRSSLNKTMKKVY-EWFDEQGIDVISKT 147 Query: 71 DGSYRVEGTVLNQRLCLF----------HWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 + + + R + ++ + + P + Sbjct: 148 NYGILLNCSENKWRKAVIKLSNNKEHRGYFYSLLHKASNDSDDNYLNPTNYILPLYKEAL 207 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 + D + ++ L+ +F+ L ++L + + G + Q + Sbjct: 208 FDEEDLYKIIDSISYLEDLLETKFDDSSYVSLLIHLAIAMKRLKKGNKILMSDEQLEQLK 267 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 + E+ V++ ++ +P +E ++ + R L + D++LR+ + + Sbjct: 268 NEDEYSVSKSFAKYLNTIFDIDIPDEEIGYITIHLMGARRFFILAND---DKELREVVIK 324 Query: 241 LVNHFRELGNVRFYDE--QGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 ++++ +++ N ++ L L HL A++R ++ I+N + Y + Sbjct: 325 IIDNVQKILNKSIDNKYIDDLIKDLTVHLKPAISRLKNSLMIENPILGTIKGKYMDIFSA 384 Query: 299 TRAALAGF-ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQI--ILLTGNDSEREAQI 355 + E Y ++ D+E + + GA L + + K+I I + + + Sbjct: 385 VEKSCFIIKEKYYIENIPDDEIAYITMHIGASLEKSRVIKSKKIKAITMCASGLGTSKML 444 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 +++ + I +S+ R A +II+ + P+I L Sbjct: 445 SSRIQREFPMIEIIGEISI---FDASRYRKADVIISTIDTYIKT-EIPIIRVTPLLDNKD 500 Query: 416 QEQIRKMLE 424 ++I L+ Sbjct: 501 IKKIEDFLD 509 >UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metabolism n=3 Tax=Bacillaceae RepID=B7GJR6_ANOFW Length = 691 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 67/425 (15%), Positives = 153/425 (36%), Gaps = 18/425 (4%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 + + +R+ IL+ L + G + + + V S D+ + ++ + H L L Sbjct: 85 TEYTPEERQTMILIALLESGEPVKLISLANDLNVTVATISNDLDKVEEKVEK-HGLALVR 143 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 + G+ +R + L F F + + KS + + Sbjct: 144 KRGYGVEIAGSEAAKRKMMSELLFDHFDESQFFSFMKESIQKKSTDLVNTVTEKLLGLVD 203 Query: 129 LQALVNLCSRRLQKR-----FESRDIHF--LCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + L + R+++ F D + L ++L + + G F+ + Sbjct: 204 KKKLF-MIERQIEAMKDDLPFTIADSSYIALVIHLALAIERIMQGEAIHFDAQHLQTISM 262 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-DRQLRQSIKR 240 E++ A++I + + +P +E ++ + ++ + ++ + Sbjct: 263 TKEYETAEKIAKRLEEVFHLVIPKEEIGYITMHLMGAKLRTHRGYMLEEASLEIAMKTQE 322 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+ E V D+ L + L HL AL R +GI N L + Y L + Sbjct: 323 LIRFVSEQIGVDLTDDYPLYEDLIVHLKPALYRIQHHMGITNPLLHKIMEDYSELFHVVQ 382 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 + + + +EE G + + F + L+++ + +++ + + +L+ Sbjct: 383 RGVRHV--FSDMTVPEEEVGYLVLHFASALLRDK--QGIRALVICSSGIGTAKILATRLK 438 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 +P I H+ K+F + T+P+ S P + L + IR Sbjct: 439 --KEIPD-ISHIEQKSFFDVQRVDVHEYDLIVSTVPIHT-SHPYFLVNPMLPEEEVTAIR 494 Query: 421 KMLES 425 + L++ Sbjct: 495 QFLKT 499 >UniRef50_B0MFP8 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFP8_9FIRM Length = 692 Score = 188 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 65/418 (15%), Positives = 145/418 (34%), Gaps = 26/418 (6%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 V S +R I L L ++ F+ + + +D+ + E L + L + Sbjct: 86 VYSDKERGALIFLILLCAREELSIYHFTSKLDISKNTFLIDVKKLE-ERLAPYGLGIHYS 144 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 Y + G+ +R + +R+ + + EL + + Sbjct: 145 RQDGYHLAGSEFCKREAMIPIVRQILNMPNGQEAILEISQVDPELMEQVRGQ-------- 196 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 ++ +L+ RF + L L L++ G + P + E+ V Sbjct: 197 ---ISEIENKLKIRFTDERLRELPYILCLVLIRIKKGRILEDLPESFQHIAGTKEYSVMV 253 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 E + E +F A + D + + ++ ++ ++++++F ++ Sbjct: 254 EFAKEHDVAWQ-----TEKIFFAAQIQISNYHRFQSDNLRSEVEIMEAARQVIDNFEKII 308 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 V + L + L+ H+ A R + I+ ++ + Y L + ++ E Sbjct: 309 CVNIKERDILLEALFQHVKPAFYRVKYHYHIEQSIVDMVLPRYSSLHAMVKRSMKPLEEL 368 Query: 310 YGVHLSDEESGLVAVIFGAWLMQEN----DLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 G DEE + +FGAWL +E + +K+ +++ N + LREL Sbjct: 369 AGSEFPDEELVYITALFGAWLQREGILDIENQKKRAVIVCANGVSVSNFLFFTLRELFPE 428 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S++ F T L+ + L + + R+ + Sbjct: 429 IEFLTCLSMRDF--TEYKEEFELVFTMVRLETDKLQ---FLVKPFLDEASKHKFREKV 481 >UniRef50_C0ES87 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES87_9FIRM Length = 634 Score = 188 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 68/417 (16%), Positives = 151/417 (36%), Gaps = 38/417 (9%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S+ +R+ + L + + + D+ + R+ + ++L + Sbjct: 89 SSQKRQEYVFAKLMRAMEPVLTDDIAYEMNIGRSTLISDLKKL-RQTMEKYELEIVGKTS 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + G+ LN R + L S + + EL I + Sbjct: 148 KGLALGGSELNIRKFVMENL----------FGSIYQNYPQDELMLGKIREAMAEKN---- 193 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQ--FNPLQRRWAESCLEFQVAQ 189 QK FE +++ L L H P+ +N + R F Sbjct: 194 ----FEESTQKMFE----NYMTLMFDRFLTGHVITRMPEKYYNLVSRN------SFSFVD 239 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH--QRDRQLRQSIKRLVNHFRE 247 E+ + +P +E +F+ L +R P ++ + + D ++R ++++V R+ Sbjct: 240 ELIDDISKEFYIEIPIEEKIFVFLPIIGMRTPADSKNMYSIELDEKIRPLLQKIVEQIRQ 299 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 N+ D ++ H+ +NR + + IDN + E+ YP + A + Sbjct: 300 ELNISI-DTHEFTEKFMYHIMFMINRLRYNVHIDNPMFEDIHYKYPLAFKMAEIAARVIK 358 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ--IILLTGNDSEREAQIEQQLRELTLL 365 + V ++ E G +A FG +L + N L++KQ I +++ Q+R++ Sbjct: 359 EDAEVVVTQAEMGYLAAYFGVFL-EVNTLNQKQQKIAVISDKGRVTAQLFAVQIRKVVDS 417 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + +S + +G ++I + P + ++ + ++R+ Sbjct: 418 SSQLDILSPSEAV-SGILDQYDIVICTTEHIIECECPVIYIHEIFDENELKNKLRQA 473 >UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 Length = 651 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 56/417 (13%), Positives = 140/417 (33%), Gaps = 22/417 (5%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R ++ + + +E + D+ E + LR + + L T + + Sbjct: 92 ERIDYLMKRMLLADGYLKLDDLAEELFISKSTLQSDLKEVKKR-LRPYDIILETRPNYGF 150 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 ++ G L R C+ +L + L + I ++ + Sbjct: 151 KLRGEELRLRYCMAEYL-----VDDREPEPDLLSEKAGILPKDDI-------HVIRTAIM 198 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 R + ++ L +++ + P + E+Q A+ I + Sbjct: 199 KQVRNHKIPLSFFGLNNLIIHIAIACKRIRTENYVSLIPEDLHDIKLETEYQSAEAIVKE 258 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLR-----QSIKRLVNHFRELG 249 + P E ++A+ + + + +L + + ++ Sbjct: 259 LESALSVTFPEQETAYIAIHLLGTKRMAQSQLEGKELTRLIDGETSRLTEAMIEAIEREL 318 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + D+ L L H+ A+NR+ + + + N + YP A + + Sbjct: 319 KLGITDDNELKAGLALHIKPAINRNRYGMNLRNPMLSAIKENYPLAFEAGVIAGIVIKEQ 378 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 G+ + + E G +A+ FGA + + K+ +++ + + + ++LR + Sbjct: 379 TGIDIHENEIGYLALHFGAAIERRKTERPPKRCLIVCASGAGSAQLLREKLR--SRFAKR 436 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSP-PLIYTDLTLTTHQQEQIRKMLE 424 ++ + + ++ T+P+ P P++ L +I MLE Sbjct: 437 LEIVGTADYCSLDQLSFESIDFVVSTVPIKKDLPVPVLKVHTLLGGGDFTKIDAMLE 493 >UniRef50_B0MFY1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFY1_9FIRM Length = 684 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 65/418 (15%), Positives = 153/418 (36%), Gaps = 13/418 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +RR LL + T+ L V + DI E + IL +++ + Sbjct: 85 YSVQERRILELLMILLSAEVVTIEKMQNLFDVSKNTILKDIKEWKK-ILGNQNISIASSI 143 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y ++G R + +++ P I ++ L Y + + Sbjct: 144 KFGYVLQGEEFAIRKIVGKEIKKLQNFQPKDI---LKKWMQQSLVTITGEDYDYLEIA-R 199 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 L+ + + + C + ++ G T + ++ +Q ++ Sbjct: 200 CLIKQYEQDENIKLVLENEELECSMILISWIRSMDGYTMNLHTEEKVTLVETKPYQSLKQ 259 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + +P E ++A L ++V + D + K LV +F + Sbjct: 260 SFEKL-KVYNLEIPESEIYYIATLLLGIKVAQFVSQDQ-EDLYISNFTKALVVNFERIAC 317 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F ++ L +L H+ R + + N L ++ R+YP + T A+ + + Sbjct: 318 ISFDNKDRLMTRLKGHIRPLYYRLKYGVQSTNPLVQDVMRMYPEIYDFTGRAVREMKDDL 377 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEK----QIILLTGNDSEREAQIEQQLRELTLLP 366 L+ +E + + F + + + +K ++++L + +++QL+ L Sbjct: 378 AKMLTSDEIAYLTIYFISD-EKYQTIQKKSNVSKVLVLCADGMATSTLVKEQLKTLFGST 436 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 +IK + + ALII+ L +++T++ L +++I +++ Sbjct: 437 ADIKLGIISEAKKYNL-DDFALIISTGYSELLAHRKNIVFTNVILEDSDKKKIIQVMN 493 >UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=Staphylococcus aureus RepID=A5IPR4_STAA9 Length = 651 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 61/420 (14%), Positives = 150/420 (35%), Gaps = 21/420 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R I L LF+ + ++ V + DI + L + L L + Sbjct: 85 FSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRTIADDIK-MIQAQLDQYHLKLNYVH 143 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + + V G + R H++ + + FI + + L RR I + + Sbjct: 144 NKGFNVIGEEDHYRKAYAHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSE---- 199 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 I L ++ + + + + + ++ +A + Sbjct: 200 ----------NYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRHTNQYAIASK 249 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLR-VPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + +R P E +F+ L + L Q+I L+ + Sbjct: 250 MIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQEL 309 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + + L L TH+ A++R + + N L +E R YP+++ ++ E + Sbjct: 310 GIDMSKDNKLHTSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQD 369 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTLLPL 367 + +++E + + F + + + + +++LL G+ ++ +L L P Sbjct: 370 AAIRFNEDELTYITIHFASSIERVATHKQSMIKVVLLCGSGIGTSQLLKSKLNHL--YPE 427 Query: 368 NIKHMSVKAF-LQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA 426 + + L+ + T+P + + P+I+ D + ++++ +++ + Sbjct: 428 FHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKLNQIINDS 487 >UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus pneumoniae RepID=B2ISN0_STRPS Length = 659 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 66/414 (15%), Positives = 152/414 (36%), Gaps = 18/414 (4%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 R IL L + ++ V S D + R +L + L++ + + Sbjct: 96 GDDRLVFILNKLLFEQVPVLFDDLADELYVSRSTLSHDFRKI-RVMLSEYNLSIESRANK 154 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 V G ++R + ++ F+ +QF + +K + + + + Sbjct: 155 GVYVSGEERDKRRFIINY----------FLENQFFKTIHCYVKFNFFDQTVPLEEFARIV 204 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 ++ C + + + L +++ +++ +G + + + + +E +VAQ I Sbjct: 205 LDEC-QEANLKLSDFVLQNLVVHIALSVIRLKSGFEIK--NIDCQMTDDAIERKVAQRIL 261 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + Q P E ++ L + + L++S+ + + Sbjct: 262 SKVREVTNQEFPVQEIDYITLHLLAKSQQCQKNQKNISEEVLKKSLFKTFQNLGLDDMYN 321 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 F + L + L THL R I ++N L +E + Y + TR LA + Sbjct: 322 FSSDFQLIEGLITHLMTLQVRLESRITLNNPLVDEIKQNYSDIFFMTREILANMDKFLEW 381 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 +SD+E V++ F A + + + + I+ + + +L T ++ + Sbjct: 382 TISDDEVAYVSLHFLAAMERSKESTKFNILAICATGFGAAQMLRNRLE--TEFGKRVEVV 439 Query: 373 SVKAFLQ--TGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 V + + +G I++ + F P+ + L + + E IRK ++ Sbjct: 440 DVIGYYELNQEKLKGIDFIVSAVDLSNLYFQIPVFKVSVFLKSDEMEMIRKAMD 493 >UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0J7_9FIRM Length = 708 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 78/420 (18%), Positives = 141/420 (33%), Gaps = 8/420 (1%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S L+ QRR ++ L + T + L V D S D+ + L Q+TL Sbjct: 105 STLTPDQRRSILIARLLMADGPLKLFTLAHLLHVTDSTVSHDLDRL-QPWLAARQITLVR 163 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFIT--SQFTPALKSELKRRGIARNFYDD 126 VEG + R L + + + D Sbjct: 164 RPGLGVYVEGAERDIRRALVR-IIHDYVDEKELLALIGDDAAEEGPAYAADRALLGLVDP 222 Query: 127 TNLQALVNLCSRRLQ-KRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 ++ + + + Q + L ++L + + G T + EF Sbjct: 223 AQIRRIDDAVAAETQDRNIPDSARVGLVVHLALAVRRLQQGDTIAMDAGTLEELRQTEEF 282 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLR-VPDPLRDAHQRDRQLRQSIKRLVNH 244 VA+ I +P E ++ + R + P + +L Q + ++ Sbjct: 283 SVAETIAARMGEVFSISIPAAEIGYITMHLLGARGMTLPSGGGRVDNFRLVQIAQSIMRR 342 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 E + L L HLA AL+R + I N L + +P L+ R A+ Sbjct: 343 ASEKSGAPLMRSRTLLTGLVNHLAPALHRLKLHMDIRNPLLAQMEEEHPELMEIARHAIP 402 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELT 363 E E G+ + ++E +A+ GA L + H ++++ + +LR Sbjct: 403 MMEEEAGMPVPNDEVAYIAIHIGAALTEAGGDHPAARVLVACPTGLGTSRLLASRLRRSY 462 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S A R +A T+PL P++ + LT + QI +L Sbjct: 463 ERIRVVGVVSSLALTAQEILRRSAD-FVVSTVPLSPLPVPVVVVSVFLTAADRAQIDAVL 521 >UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ADA7_ENTCA Length = 669 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 63/413 (15%), Positives = 155/413 (37%), Gaps = 14/413 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 A R+ +L L + + V S DI E +++L+ + + L Sbjct: 88 EANDRQYFVLNQLLFGQKPVFVDDLAADLCVSRSTISNDIVEI-KQLLKPYTIELKHRTS 146 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 V G+ + R + ++ F ++ L + + + + + Sbjct: 147 QGIYVAGSENSLRHFIMNY----------FFMNRLQDNLYAFSMYKHLLEGIAIEEIVII 196 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 +++ C R+ + I+ + L++ + + AG Q +P + +E+Q A EI Sbjct: 197 VLDTC-RKYFLKLSDFMIYTIVLHIGLAIKRLQAGFEIQLHPQEAN-LAQEVEYQSALEI 254 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ-RDRQLRQSIKRLVNHFRELGN 250 +++ +PP+E ++A+ V + +R+ D +++Q + ++ + Sbjct: 255 VEKIRQQMGIVLPPEEAFYIAIHLKNKLVSETIREQIDLDDNEVKQQLLVVLQKIDQETG 314 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 ++ L D L H+ L R ++N L E + Y + T + Sbjct: 315 FCLAEDPLLIDGLMMHITPLLQRLNNGTSMENPLLETIKKDYSDFFQLTIRHFSDVPFFA 374 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 +++ E + + A + + + + +++++ ++ +L L I+ Sbjct: 375 PYKVTEGELAYLTIHLTAAMERLANQQKARVLVICATGIGSSQMLKNRLEHELGSKLVIE 434 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 M + G LII+ +P + + P++ + L ++I + L Sbjct: 435 EMISYYEISEQKLAGIDLIISSIKVPDVVLNIPIVTVSVFLDKKDIQKINRQL 487 >UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus halodurans RepID=Q9K679_BACHD Length = 700 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 69/423 (16%), Positives = 151/423 (35%), Gaps = 19/423 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + +R+ +L L Q + T ++ V S D++ L +L L Sbjct: 85 EFTPEERQMLLLAILLQHREPLKLFTLADELNVTVATISNDLTR-AEAWLNGFRLELVRK 143 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 ++ G + R + L S + + L + I+ NL Sbjct: 144 RGYGVQIIGRESDIRRAISQLLAEHL--TESKMYRMLSEPLDDWEQTDAISERLLHLINL 201 Query: 130 QALVNLCS------RRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 + + N+ +++ + R L ++L + + G + +P + Sbjct: 202 ELVRNIQEVLADFRKQMVEPMADRAYIGLIVHLTLAIERIRQGEKIEIDPSYLSKLKMDK 261 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR-QLRQSIKRLV 242 EF++A ++ R +++ +P E +M + + + QL +K L+ Sbjct: 262 EFELAADLARRLEQKLGMNIPEAEVGYMTMHIRGAKAHIETESLLEESNFQLGVRVKALI 321 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR-A 301 + + +V+F D L L HL AL R + I N L E+ + Y L + Sbjct: 322 HEVEKSLHVQFQD-PSLFQGLVAHLKPALYRIREKMKIYNPLLEKIKQDYEELFHVVQVK 380 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRE 361 FE + + +EE+G + + FG+ L + +++++ + + ++ + Sbjct: 381 GNKVFEP---ITIPEEEAGFLVMHFGSALERLKRKRTLKVLVVCSSGIGSSKFLASRIEK 437 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 +I+ S + L ++ + + L H+ +QIR Sbjct: 438 EFPEIASIEQASFFELGEKNL-HDYDLFLSTIPLHADVKH---FVVQPFLPPHEVKQIRA 493 Query: 422 MLE 424 L+ Sbjct: 494 YLD 496 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 97/328 (29%), Gaps = 30/328 (9%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL L Q T+ ++L V D+ +IL + L L Sbjct: 6 RERNILHQLLQHKDGLTIPKLAQLLDVSTRTIQRDLKGIE-DILAEYGLKLN-KSSAGLV 63 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 + G Q L + L + L L+ R + F L V Sbjct: 64 ISGGPSEQEKLL--GFLQTLELNEFTPEERQMLLLAILLQHREPLKLFTLADELNVTVAT 121 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 S L + + L L + G + ++R ++ E ++ R Sbjct: 122 ISNDLTRAEAWLNGFRLELVRKRGYGVQIIGR---ESDIRRAISQLLAEHLTESKMYRML 178 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 D L + +L ++I+ ++ FR+ D Sbjct: 179 SEPLDDWEQTDAISERLLHLI--------------NLELVRNIQEVLADFRKQMVEPMAD 224 Query: 256 EQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 + L HL A+ R I ID + + + E + G++ Sbjct: 225 RAYI--GLIVHLTLAIERIRQGEKIEIDPSYLSKLKMD--KEFELAADLARRLEQKLGMN 280 Query: 314 LSDEESGLVAVIF---GAWLMQENDLHE 338 + + E G + + A + E+ L E Sbjct: 281 IPEAEVGYMTMHIRGAKAHIETESLLEE 308 >UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=14 Tax=Streptococcus RepID=Q1JGE0_STRPD Length = 664 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 60/412 (14%), Positives = 140/412 (33%), Gaps = 15/412 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + R +L F + + ++ I+ +QL L + Sbjct: 95 ESVDREDYVLHKFFFEDAVQDFEELCQELYISRTTLKHVLAGIKERII-PYQLELEITHQ 153 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ G + R + + F + F L + + + + + + Sbjct: 154 H-IQIRGKEEDIRHFIMDY----------FFVTSFDNTLSTMVGNTFLEGINFAEIMIIV 202 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 L R + + ++ L L++ + + +G + + E+QVA I Sbjct: 203 LYEC--RDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLELFSIP-IAIRQSDEYQVALRI 259 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + P +E ++AL + D +L+ +K + +L + Sbjct: 260 LYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDEKLQDHLKACIAKISQLTGM 319 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 + L L H+ R I + N L EE YP + T+ + Sbjct: 320 TLETDTNLFQGLLAHMMPLTTRLENHIQLTNPLTEEIKSQYPEIFTLTKQTFSDLLVCQN 379 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 +SD+E +++ A + + ++ H+ +++++ ++ +L + L I Sbjct: 380 NDVSDDEWAYISLHLMAAIERYSNRHKLRVLVVCATGYGSAMMLKNRLEKEFEGRLRIVD 439 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + + LII+ ++ +F P I + L+ E IR+ + Sbjct: 440 VISYYEITEERLKTVDLIISSISLANLMFLTPAITVSVFLSNQDIETIRQFI 491 >UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax=Streptococcus RepID=A8AYJ7_STRGC Length = 662 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 67/412 (16%), Positives = 142/412 (34%), Gaps = 18/412 (4%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R IL L + ++ V S D + +++ + + L + + Sbjct: 95 DRYNYILNKLLFEQESIYFDDLADELYVSRSTLSSDFKKIRQDLSK-YDLEIESKPKRGV 153 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 V G N R + + F +F L + +K R + +++ Sbjct: 154 YVTGDERNIRRFIIEF----------FFHDKFFQILHNYIKLEVSGRPISLEELTIIVLD 203 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 C R Q + I L +++ L + G + E E ++A++I + Sbjct: 204 EC-REGQLKLSDFVIQNLVIHIALSLKRIGEGFQIK-QLDSWSMDEYREEGKIAEKILKR 261 Query: 195 WQRRALQPVPPDEPLFMALLF-SMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 P +E ++ L S + + +Q+R+ + ++ F Sbjct: 262 VYHSTGLKFPKEEVDYITLHLVSKGNLQTNKCEKEDVAQQIRKQLLFVLEQSNFTHEYPF 321 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 ++ L + L HL+ R + +DN L E Y ++ T L+ Sbjct: 322 KNDFQLIEGLVAHLSTLFVRLKNHVKMDNPLLAEIQNHYAGVLEMTGNILSAMPIFANEK 381 Query: 314 LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 LS +E VA+ F L + + + I+++ I+ R L ++ + Sbjct: 382 LSADEVAYVALHFMTSLERLKEKQKFNILVICATGYGSAQMIKH--RIDNELGNLVRIVD 439 Query: 374 VKAFLQTGAPR--GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 V + + R II+ + +F+ P+ + L + + +IR + Sbjct: 440 VIGYYEINDERLKNIDFIISSIDLSNLVFNIPVFTVSIFLNSDEIREIRHKI 491 >UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK9_BACCO Length = 620 Score = 184 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 67/414 (16%), Positives = 146/414 (35%), Gaps = 26/414 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 +R IL L + V D+ + + IL+ + LTL Sbjct: 83 EQEERVKYILKRLLLEKDYVRLEDLEADLYVSKSTLHTDLKKVRK-ILKKYDLTLANRPH 141 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 +VEG +RLCL S Q P ++ + + + ++ Sbjct: 142 YGTKVEGGEFKKRLCLAD----------SIFGWQNKPGQQNTPFNQDLFQK------VKQ 185 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ + + RF ++ L ++ + G T + P + E +VA+EI Sbjct: 186 ILIRIISKYRIRFSDIELQNLATHITLACKRIEDGFTIEPLPFHFKE-SYTFERKVAKEI 244 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 ++ P PP E ++ + ++ D ++ + +++ + Sbjct: 245 TGEVEKSVGIPFPPAEIDYILVHLLGTKLISKHVARQVSD-EIDDIVNAILHELKTQFRW 303 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 F +++ + L HL +LNR + + I N L E +P AA E+ Sbjct: 304 DFSNDKEFRNGLTLHLHTSLNRMKYKMHIRNPLLNEMKTKFPIAFEGAVAAGECIEAVIH 363 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSER--EAQIEQQLRELTLLPLNI 369 ++++E +A+ L + ++ TG S + Q+E + + I Sbjct: 364 KKVNEDEISYLAIHIAIALERMRKKKRVLVVCATGLGSAKILSYQLENRFANEMEIVDTI 423 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + ++ + + LI++ +P P++ L + I++ + Sbjct: 424 SYYTLSDYDLSR----VDLIVSTIMIP-DHLEVPVVVVSHFLEENDAIHIQREI 472 >UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EN85_OCEIH Length = 696 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 63/420 (15%), Positives = 148/420 (35%), Gaps = 16/420 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S L+ +R+ +L TL Q + + V + S D+++ ++ + L+L Sbjct: 85 SELTEEERQVILLYTLLQFREPVKLFHLATELNVTIAMVSQDLNKLESQV-KSFGLSLIR 143 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 ++EG +R L H + R + P + ++ ++ + Sbjct: 144 KKGYGVQIEGDEGRKRSVLSHLISRH--IDPFQYVEKLKERIQEDVSKSDTISERLLGLV 201 Query: 129 LQALVNLCSRRLQKR-------FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 ++ ++Q+ L +++ + + G F+ + + Sbjct: 202 DAEKLDKIEEQIQRMRNQLPYDLADSAYIGLVVHIALAMERLQKGDIIHFDDEYKEQIKD 261 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDP-LRDAHQRDRQLRQSIKR 240 E+++A E+ H + +P DE ++ + ++ + + + K Sbjct: 262 EQEYKIAAEVIGHLEEAFSLFIPEDEIGYITMHLMGAKLRENQNYLLEESSMDIAYKAKE 321 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+ N+ + L THL A+ R + I+N + +E + Y L Sbjct: 322 LIRSVSNEMNIDVTHNNRFLNDLTTHLKPAVYRLKQQMNINNPMIDEIKKDYIELFEVVD 381 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 A+ + DEE G + + F A +Q + +++++ + + +L+ Sbjct: 382 KAIQHV--FPNLAFPDEEIGYIVLHFAATFLQTDSQSNLKVLVICSSGIGTSKMLASKLK 439 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 H S+ L G +I++ T+ L + LT + +I+ Sbjct: 440 NTFPEISIANHQSLFD-LDKETLAGYDVIVS--TVALEDIDRSYVLISPLLTDEEARKIK 496 Score = 74.4 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 108/330 (32%), Gaps = 29/330 (8%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS+ +R IL L + ++ ++ V +I + + +L +QL L Sbjct: 3 LSSRER--HILKILLEAEKHMSVKEIADQLDVSVRTIHREIKKIEK-VLGDYQLNLVKKT 59 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 ++G+ N++ +F + L + L+ R + F+ T L Sbjct: 60 GTGISIQGSTENKK--VFRQAMEELSSSELTEEERQVILLYTLLQFREPVKLFHLATELN 117 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGIT-PQFNPLQRRWAESCLEFQVAQ 189 + + S+ L K L L + G + + L + FQ + Sbjct: 118 VTIAMVSQDLNKLESQVKSFGLSLIRKKGYGVQIEGDEGRKRSVLSHLISRHIDPFQYVE 177 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 ++ Q + E L ++ ++ + I+R+ N Sbjct: 178 KLKERIQEDVSKSDTISER------LLGL-------VDAEKLDKIEEQIQRMRNQ----- 219 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 + + L H+A A+ R I D+ E+ + + E Sbjct: 220 -LPYDLADSAYIGLVVHIALAMERLQKGDIIHFDDEYKEQIKDEQE--YKIAAEVIGHLE 276 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLH 337 + + + ++E G + + ++EN + Sbjct: 277 EAFSLFIPEDEIGYITMHLMGAKLRENQNY 306 >UniRef50_B0KCW5 Transcriptional antiterminator, BglG n=9 Tax=Thermoanaerobacter RepID=B0KCW5_THEP3 Length = 680 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 71/417 (17%), Positives = 147/417 (35%), Gaps = 11/417 (2%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L+ QR+ + + L A FS V + SL + + E L+ L+L Sbjct: 87 LTPEQRQILMTIQLLLSEEPIKAAYFSYQFNVVEGTISLYLDKIE-EWLKMRNLSLIRRR 145 Query: 71 DGSYRVEGTVLNQRLCLFH--WLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 +VEG+ L++R + + + +F+ + Sbjct: 146 GYGIKVEGSELDKRNAIVELFYNYKPIEELLAFVYNDEKDNYVYTFFSTVFDNELVQL-- 203 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 ++ + + + + ++L + + Q N + EF Sbjct: 204 VKRIAQQIKNVIHGHLSDLNYFGMFVHLLVSIYRTKIDKPIQLNDEFVKDILLSNEFIFM 263 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 +++ + +P E ++AL S + + L+ K +V L Sbjct: 264 KDV-EKILKENEVYLPDAELAYLALHLSPKKYVYKQNRFEELGISLQDLSKEVVEEVSRL 322 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 N++ ++ L L H AL R + N L EE Y L + A S Sbjct: 323 LNIKINCDEQLIVGLSQHFEPALYRLTMGLQTTNPLVEEIKNYYGDLFKAVNKACKLIFS 382 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTLLPL 367 +Y + + +EE G + + GA + ++ L +K ++ ++ N + +L+ L Sbjct: 383 KYNLMIPEEEIGYITMHIGAAIERQQALSKKLRVFVICPNGIGTARILSAKLKTLFREVD 442 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 I ++ + + G LII+ T+ L +I LT +++ + +E Sbjct: 443 AIDIGAIWEYKKKG--DNYDLIIS--TVKLEDLKDNVIVVSPFLTEEDIKKVEEFIE 495 >UniRef50_Q9KGB4 BH0193 protein n=3 Tax=Bacillus halodurans RepID=Q9KGB4_BACHD Length = 683 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 66/420 (15%), Positives = 149/420 (35%), Gaps = 25/420 (5%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 AP LS +R +LL L ++ F+ V + D+ + L LT Sbjct: 82 APQPYLSKAEREDLLLLMLVSSD-DLSLHHFTSELAVSQNTILSDLKTV-KTFLAECDLT 139 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + Y + G N R +FH T + +R + Sbjct: 140 IRYSRKFGYYLHGNEFNIRRLIFH-----------LTCKWLTMGDGASRIQRVAGITKEE 188 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 L+ ++ ++L F +I + L L + G + ++ Sbjct: 189 VGELKRRIHTLEQKLNLTFTDENIQSMPYTLLLILKRIKLGRLINRFSIHYEELSDTKQY 248 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 +E+ ++ +P +E LF+ L V + L ++ ++ F Sbjct: 249 HATEELLSGFEE-----IPREERLFITLYLLTTNVYWSKTSTEGQVPNLLPALVDMLRLF 303 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + +++ L +L H+ A R + + + + + Y L + ++ Sbjct: 304 EKRACIALQEKEQLLTKLLLHVNPAYYRIKYQLTEMSKTSTKISEEYKELHHLVKQSMKP 363 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELT 363 E+ GV + + ES + ++ G WL ++ D +K + I++ + +L+EL Sbjct: 364 LETLIGVEIPENESSYLTLLIGGWLTRQGDSIQKKTKAIVVCSKGVSISRFLLSELKELF 423 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + +S++ F P L+ + + L T L +++++++ + Sbjct: 424 PDFIFLDSLSLREF--AIYPLNYDLVFSTIPLDTTKK---LFLTSSILEREEKKRLKEQV 478 >UniRef50_A8R9X4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9X4_9FIRM Length = 689 Score = 183 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 60/418 (14%), Positives = 140/418 (33%), Gaps = 25/418 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 V +R I++ L ++ F+ + + + D+ + IL + L L Sbjct: 86 VFEENERLKFIIMILLAHKEELSIQHFTNILKISKNTVINDMKKLQMNILDSYDLKLLYD 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 Y + G +R + + +R + + + N Sbjct: 146 RSKGYYIVGKEYEKRNLIIYLVRSILKSLNG-----------KSMLVSVLEINEDVLNGF 194 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 ++ V L+ ++ I + L + L+ AG P + E+ + Sbjct: 195 KSDVEKVESLLKVQYTDERIREIPYILYFLYLRIKAGKHLDVLPEDYQHIVGTKEYGIIL 254 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 ++ ++ +F+ F + + + +L ++ +++ +F L Sbjct: 255 KVFEKYRIENAMD-----KIFIVTQFQISSINYADGYDTSFELELFEAASKVLYNFENLV 309 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + F D + L D L HL A+ R + I+ + + L TR A+ FE Sbjct: 310 CITFKDRKSLLDALIQHLRPAMYRIRYHYHIEGKILNMILPQHSYLFELTRHAMQPFEEM 369 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDL----HEKQIILLTGNDSEREAQIEQQLRELTLL 365 +EE + ++FG W+ +E L +++ I++ N + +L++ Sbjct: 370 IKSPFPEEELAYITILFGGWMTKEGTLEMVEKKRRAIVVCTNGVSISNFLFLKLQKAFPE 429 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I +S + F + + + + + + +RK + Sbjct: 430 LEFICTLSSRQFYE--FEQEFDAVFTTVLLDTDKSQ---FLVKPIMNENDVVTLRKKV 482 >UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WHN0_STRDG Length = 661 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 67/412 (16%), Positives = 156/412 (37%), Gaps = 26/412 (6%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL L T ++ V S D + ++ + +QL++ + Sbjct: 96 RHKAILNKLIFKEETVLFDDLADQLFVSRSTLSSDFKKIRSQLAK-YQLSIESKPYRGVY 154 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 V G ++R + + F F + + + + + + +++ Sbjct: 155 VLGDEQDKRHFIMDY----------FFGEHFHQNMSNFVGKDILDIPLSMEELTIIVLDE 204 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 C R + + I L ++L + + G P++ + E VA+ I Sbjct: 205 C-RNQELKLSDYAIQNLVIHLALAIQRFQKGFRI--APVELCECKYQKELLVARNIADRL 261 Query: 196 QRRALQP--VPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 R Q +P +E ++AL V + +A+ + LRQ + +++ F Sbjct: 262 ANRLGQEELIPEEETAYIALHLISKSVAEQDPEANLLN--LRQELITALDNCDTSQGYDF 319 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 + L + L HL L R + I +DN L E+ + Y +++ T L + + Sbjct: 320 SSDMALIEGLLMHLEVLLERLVNNIHLDNPLLEDIQKRYGDVLKLTENFLGDLPTFQKYY 379 Query: 314 LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIE----QQLRELTLLPLNI 369 LS +E V++ F A + ++ + H+ ++++ ++ +L +L + I Sbjct: 380 LSQDEIAYVSLHFMASIERQKEKHKLTVLVICATGFGSAQMLKNRITNELGQLVTISDVI 439 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 + L + I++ + +F+ P++ + L+ + ++ ++ Sbjct: 440 GYYD----LDNDKLKDVDAIMSTIDLSNLVFNIPVLTVSVFLSDQEIQEAKQ 487 >UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A809_9CLOT Length = 721 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 66/426 (15%), Positives = 144/426 (33%), Gaps = 17/426 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 + +R+ IL L F + + + + D E E L + L Sbjct: 93 YTKEERKKFILSNLLTSSEPIKSYYFYKTLKISEGTLNNDFIEIE-EWLDNFSIKLIRKP 151 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCP-----SFITSQFTPALKSELKRRGIARNFYD 125 VEG+ + R + F + + E+ N D Sbjct: 152 GTGIYVEGSEKDMRSAQVRLIYNSFEEQELIDIVKNVGNNIQKHNVIEISSENRLLNLID 211 Query: 126 DTNLQALVNLCS---RRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + ++ + N S + + + L +++ + + G T +S Sbjct: 212 KSIIKKVENSLSETIKDINLKISDSAFIGLVVHISLAVQRLRNGETISMEQDVLNELKSI 271 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ--RDRQLRQSIKR 240 +F+ A +I + + VP DE ++ + ++ ++ + D +L KR Sbjct: 272 EQFKTATKIAQQIEEEFDIKVPIDEIGYITMHLRGSKLRLETKNHNFSLDDVELMNIAKR 331 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+ + F ++ L + L H+A +L R + I N L + Y + Sbjct: 332 LIELATDEFGFDFSTDKKLLNDLVNHMAPSLCRIKMGMDIRNPLLNQIKTEYKDIYDGVA 391 Query: 301 AALAGFESEYGV-HLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQ 358 + + + + ++ + E +A+ FG+ + + + E + + + Q Sbjct: 392 NIIYIIKEKLDIDNIPESEIAYLAMHFGSCMERNLIEEVEIRAVACCPTGIGTSRFLMTQ 451 Query: 359 LRELTLLPLNIKHMS-VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 L++ + +S +K + G LII+ M + S + L Sbjct: 452 LQKKFSNLKMVDTVSAIKIDEKALKDEGIDLIISTVEMETSIIS---VVVSPLLNLEDVA 508 Query: 418 QIRKML 423 +IR +L Sbjct: 509 KIRHVL 514 >UniRef50_C0CS52 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CS52_9FIRM Length = 686 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 66/423 (15%), Positives = 156/423 (36%), Gaps = 22/423 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +RR L+ + T+ ++ V + DI E ++ +++ + Sbjct: 88 YSIEERRILELIFISLSTEVVTIEKMQKIFDVSKNTILTDIKEWKAALIGL-DISIVSTI 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y ++G R + +++ P + ++ L + Y + + Sbjct: 147 KVGYVLQGEEFTIRKMIGKQIKKLENFQPKIV---LGKWMQESLAKISGEEYDYREIA-R 202 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 L+ + + S + F C + ++ G T N +R +Q ++ Sbjct: 203 CLIKQYEQDENIKLVSENEEFECSMILVSWIRSMEGYTVVLNAEERAALAVTCPYQSLKK 262 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + + +P E ++A L +++ + + + + L+ +F + Sbjct: 263 SFQKL-KEYNLEIPNSEIYYIATLLLGIKIAQFVSQDQ-ENLYIYRFTASLLKNFERIAC 320 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F + + L ++L H+ R + + N L ++ R+YP + T ++ E Sbjct: 321 IAFENRERLANRLRGHIRPLYYRLKYGMQSTNPLLKDVMRMYPEIYEFTERSVRAMPDEL 380 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDL-------HEKQIILLTGNDSEREAQIEQQLRELT 363 L+D+E +AV F + E ++ +I++L +++QL+EL Sbjct: 381 AQTLTDDEIAYLAVYF---ISDEKKQVVTNTVENKSKILVLCAAGMATSTLVKEQLKELL 437 Query: 364 LLPLNIKHMSVKAFLQTGAPR--GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 NI + V + R LI++ + I+T++ L + +I + Sbjct: 438 ---GNIADIEVGIVSEAEKYRLDNYTLIVSTSYSDILNQHRNTIFTEVVLQDKDKRKIIQ 494 Query: 422 MLE 424 +L Sbjct: 495 LLN 497 >UniRef50_C9AU45 BglG family transcriptional antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9AU45_ENTCA Length = 688 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 72/415 (17%), Positives = 145/415 (34%), Gaps = 25/415 (6%) Query: 10 VLSAPQRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 +S+ +R I LTLF ++ F + + D+ + E+ + ++++ Sbjct: 75 EMSSKERGKYIFLTLFYYEKDYLSVNHFLDALKIGKTTFMSDLRKLQAELQG-YDISISY 133 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 Y + G L R L FR+ +TS+ + R D Sbjct: 134 SRKEGYHLAGDELMIRYAL-------FRMILEDVTSKDDDFIYRYFIHN--ERIQLADEQ 184 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRR-WAESCLEFQV 187 L L + + E+R I Y+ L P E++ Sbjct: 185 DTYLSLLLEKHAIELVENRLIE--LNYILIFLYPRMGLNEFDLKPFSNDHELVKMKEYRF 242 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A+E+ + E ++ + + ++ Q + + ++R+V F Sbjct: 243 AEEVLENAGVMNSI-----EKNYLCGWVLGMAL-GNEKEWLQGNLVIIDLVERIVERFEL 296 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 L +RF D+ + QLY+H R LF + I N + E+ Y L + + L Sbjct: 297 LSGIRFKDKHSVIKQLYSHFRPTYFRMLFRLPIINPMQEKIFEKYNDLYQIVKETLRPIS 356 Query: 308 SEYGVHLSDEESGLVAVIFGAWLM--QENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 + L DEE + + F + +E + +K +++ N A I +L+E+ Sbjct: 357 DSFDSKLPDEEVAFLTMHFALLIRNSEEYMVQQKVGVVVCPNGIGSSAIIYNELKEI--F 414 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYT-MPLPLFSPPLIYTDLTLTTHQQEQI 419 P I ++ + +I L P+ + ++ ++ Q+ Sbjct: 415 PSFILLGPIETSELHSFDQSYDIIFTTKPNFQLYPLKKPIFVVNPIMSYEERTQL 469 >UniRef50_P46321 Putative phosphotransferase enzyme IIA component n=2 Tax=Bacillus RepID=LICR_BACSU Length = 641 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 54/417 (12%), Positives = 145/417 (34%), Gaps = 24/417 (5%) Query: 14 PQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 +R ++ L + +E + D+ E + +L +++ + T + Sbjct: 91 EERMAYLMKRLLLADHYLKLDELAEELFISKSTLQTDLKEVKKRLL-PYRIVMETRPNYG 149 Query: 74 YRVEGTVLNQRLCLFHWL--RRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 +++ G + R C+ ++ R + + P + E+ R I + +D Sbjct: 150 FKLRGDEVQMRYCMAEYIVDERETEIDVLNEKADILPKEEIEIIRSAILKKMKND----- 204 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + + ++ L +++ + P E+Q A+ I Sbjct: 205 ---------RIPLSNMGLNNLIIHIAIACKRIRTENYVSLFPKDMDHILHQKEYQAAEAI 255 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR---DAHQRDRQLRQSIKRLVNHFREL 248 + + + P DE ++ + + + D + + Q ++ Sbjct: 256 VKELESKLSVTFPKDETAYITMHLLGTKRMTQSQCGEDTFSIEEETDQLTLAMIKAVDRE 315 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 + ++ L L H+ A++R+ + + + N + YP A + Sbjct: 316 LKLGILHDKELKIGLALHMKPAISRNRYGMNLRNPMLAAIKEHYPLAFEAGIIAGIVIKE 375 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + G+ + + E G +A+ FGA + ++ K+ I++ + + + ++LR + Sbjct: 376 QTGIEIHENEIGYLALHFGAAIERKKTESPPKRCIIVCASGAGSAQLLREKLR--SHFGK 433 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSP-PLIYTDLTLTTHQQEQIRKML 423 + + + ++ T+P+ P P++ + L +I +L Sbjct: 434 RLDILGTAEYYSLDQMSYESIDFVISTIPIKKELPVPVLKVNTILGGTDFTKIESIL 490 >UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42D0A Length = 713 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 74/426 (17%), Positives = 155/426 (36%), Gaps = 15/426 (3%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + P+ + +R+ +L L Q + T ++ GV S D+++ + L+ L Sbjct: 82 SEPNEYTPWERQQLLLSILLQEREPVKLFTLAKEIGVTIATISNDLNKI-NDWLQSFDLE 140 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY- 124 + ++G +R+ L L ++ + LKSEL + + Y Sbjct: 141 MVRKRSYGIEIQGDEPKKRMALRR-LITDKVSEEELVSILESYRLKSELGEQASEKLLYL 199 Query: 125 DDTNLQALVNLCSRRLQKR---FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 D N+ V L++ L ++L + + G + + Sbjct: 200 IDLNVILKVLETLHELRRDGEPIADVSYVGLAVHLSLAVDRIKRGEKIEKHSEGFEKVLK 259 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDP-LRDAHQRDRQLRQSIKR 240 E++ A+ + + + +P E ++A+ + D + + K+ Sbjct: 260 TNEYEAAKRLVKKLEETFSIDIPQIEVAYVAMHLLGAKQGDDGSFFFQETSLDIAMRAKK 319 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+ V ++ L + L +HL AL R + I N++ Y L T + Sbjct: 320 LIEAVGVRTEVALINDHSLLEGLISHLKPALFRMEQGMKIYNSMLPAIKEGYAPLFNTIK 379 Query: 301 A-ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQL 359 + F + DEE G + + FG+ + + + I++ + + +L Sbjct: 380 ECVVEIFPTW---SFPDEEIGYLVMHFGSAIERSKKKAVIKAIVICSSGIGTSKLLATRL 436 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 + I HMS Q P ++I+ T+PL P + L+ + ++I Sbjct: 437 EKEIPEIQGITHMSAFDITQDQIP-DHTVVIS--TVPLMSID-PYFLVNPFLSKKEVDRI 492 Query: 420 RKMLES 425 R+ + S Sbjct: 493 RQYIHS 498 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 99/321 (30%), Gaps = 29/321 (9%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LSA +R I+ L + T+ ++ V DI ++L ++LTL Sbjct: 3 LSARER--HIIQYLIEAEQGITIKEIADRLNVSTRTIHRDIQGIE-QMLTQYELTLERQS 59 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 ++ G +++ L + + Q +R + + F + Sbjct: 60 GVGLKLTGRD-TKKIELKELITESEPNEYTPWERQQLLLSILLQEREPV-KLFTLAKEIG 117 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + S L K + L + + G P+ RR + + Sbjct: 118 VTIATISNDLNKINDWLQSFDLEMVRKRSYGIEIQGDEPKKRMALRRLITDKVSEEELVS 177 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I ++ ++ E L L L V ++ +++ L + + Sbjct: 178 ILESYRLKSELGEQASEKL---LYLIDLNV----------ILKVLETLHELRRDGEPIAD 224 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGID--NTLPEEFARLYPRLVRTTRAALAGFES 308 V + L HL+ A++R I+ + E+ + + + E Sbjct: 225 VSY-------VGLAVHLSLAVDRIKRGEKIEKHSEGFEKVLKTNE--YEAAKRLVKKLEE 275 Query: 309 EYGVHLSDEESGLVAVIFGAW 329 + + + E VA+ Sbjct: 276 TFSIDIPQIEVAYVAMHLLGA 296 >UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLB5_CLODC Length = 712 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 53/423 (12%), Positives = 148/423 (34%), Gaps = 17/423 (4%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL L F+++ V + + + D + + L + L Sbjct: 102 RNLIILSKLLVSNEPVKSYYFAKILKVSEGVLNNDFA-LASKWLERFDIELVRKPGLGVY 160 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSF-ITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 ++G N R + + F + + ++++ ++ N + + ++ Sbjct: 161 LKGQEKNFREAYVNLIYDSFNEKEILDMVRNISENIQTDKAIEILSENRLLNLMDRCIIR 220 Query: 135 LCSRRLQKRFESRDIHF-------LCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 L K+ D++ L +++ L + G + + EF++ Sbjct: 221 KVEATLTKKLSDLDVNLADSAYIGLVVHISLALQRIKNGENITMDKEFLKELSITEEFKL 280 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSML--RVPDPLRDAHQRDRQLRQSIKRLVNHF 245 A+EI + + +P DE ++ + R + + D ++ + ++++ Sbjct: 281 AKEIVKGMETDFNMDIPVDEVGYITMHIRGAKQRSSSNHKALNLDDIEIMEITNKMIDLA 340 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + +++ L L HL ++NR + I N L +E Y Sbjct: 341 EDEFKISLKNDERLFKDLANHLGPSINRLNMGLEIRNPLLDEIKSKYSYAYDGVEKISRI 400 Query: 306 FESEYGV-HLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELT 363 + + + + + E G +A+ F + + + ++ I++ + ++ Sbjct: 401 IKDKLNINSIPESEIGYIAMHFASAIEKNLMMNTNINIVVACPTGIGTSRFLSTKIENKF 460 Query: 364 LLPLNIKHMS-VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 ++ +S + + + LI++ + L I ++ ++ I++ Sbjct: 461 PNLNILETISAINIDEEYLKEKDVDLIVSTVELNTSLN---YICVGPFMSLDDEQIIKEK 517 Query: 423 LES 425 ++S Sbjct: 518 IKS 520 >UniRef50_C2DAD7 BglG family transcriptional antiterminator n=2 Tax=Enterococcus faecalis RepID=C2DAD7_ENTFA Length = 714 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 76/416 (18%), Positives = 155/416 (37%), Gaps = 28/416 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S R +L+ + ++ F + + A DI + +L+YH L + Sbjct: 110 FSKEDRVHLLLIMILTRVEELSLDHFCIELQISKNTALADIKKAKTLLLKYH-LEIEFSR 168 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G ++R+ LFH + ++ +T Q + + L +++ Sbjct: 169 KKGYVIVGEEWDKRIALFHSIIEIYKNYGDNVTVQLLESSQKYLD------------SVK 216 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFN-PLQRRWAESCLEFQVAQ 189 V + L ++ D + L ++ ++ G + +R E E+Q Sbjct: 217 NDVLKIEKFLGVKYTDEDFYPLLYFISSIFVRIERGQMIDSSRIQEREEIEHTKEYQSLS 276 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 I + +P DE +F++L V + A + L S+ + F Sbjct: 277 YITTDF-----PDLPEDEKVFISLQLLSSNVRNKGMVAKKDLPLLANSLWEFLTEFEVNT 331 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + D++ L +L H A R + + N L ++ Y L +++ E Sbjct: 332 LLVLSDKKDLLIKLLNHFKPAYYRIKYDLSTGNVLYDKIRSEYNVLHNFVCQSISPLERF 391 Query: 310 YGVHLSDEESGLVAVIFGAWLMQE--NDLHEK--QIILLTGNDSEREAQIEQQLRELTLL 365 + +SDEE + + G L+ NDL EK + ++L N IEQ+L+E+ Sbjct: 392 FQTEISDEEIAYITLFVGGHLISNDHNDLEEKIIKAVILCPNGISMSKLIEQKLKEIFPE 451 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 L S++ + + P ++ + + + + LT Q ++R+ Sbjct: 452 FLFYPTNSIREYKKFMLP--HDIVFSTVPVKSEKK---VYVMNEILTNSDQLKLRQ 502 >UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 Tax=Streptococcus RepID=B9DU03_STRU0 Length = 655 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 63/408 (15%), Positives = 133/408 (32%), Gaps = 19/408 (4%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R I+ L + V S D + E+ R + L + + + Sbjct: 94 DRHNFIINQLIFEQKEIFFDDLMDQLYVSRSTLSSDFKKIRHELAR-YDLKIESRANKGV 152 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 V G N+R + + F + F + + + +++ Sbjct: 153 YVSGAEHNKRHFIMDY----------FFSGNFLKNIHQYVGDDFFKLPISFEELTIIVLD 202 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 C + + I L +++ + + + G + + + E VA I R Sbjct: 203 ECRSQS-LKLSDFVIQNLIVHIALAISRVNDGFKISQLSIDEK--KFKTEILVATNILRR 259 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + P +E ++AL + + LRQ + +F Sbjct: 260 VEYVTGTDFPTEEINYIALHLISESIHTDNSE-SLERISLRQDLSEAAAEIDLHYGYQFA 318 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 + + L HL L R + +DN L ++ Y +R+ ++ HL Sbjct: 319 QDFTFIEGLLKHLEVLLERVKNNVRLDNPLLDDIQSQYKEAFVISRSLMSHLNYFKEFHL 378 Query: 315 SDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSV 374 SD+E V + A + + ++ +++ + +L LNI +++ Sbjct: 379 SDDEIAYVTLHLLAGIERFYQNNKLNALVICATGYGSAQMLRMRLENELGRQLNI--VNL 436 Query: 375 KAFLQTGAPR--GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + R G LII+ + +FS P+ + L + + I+ Sbjct: 437 VGYYDITDARLEGIDLIISTIDLSNLVFSVPVFTVSVFLKDEEVQMIK 484 >UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZM9_9CLOT Length = 697 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 63/421 (14%), Positives = 155/421 (36%), Gaps = 16/421 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + +R +++L L + + ++ + GV + S D+ E + ++ +L+L Sbjct: 91 NKDERIKKLILELLKESEPQKLFYYANMLGVSEATVSNDLDEVAKWFDKF-KLSLVRKQG 149 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRL--CPSFITSQFTPALKSELKRRGIARNFYD--DT 127 +EG R L ++ + + +L ++N Y DT Sbjct: 150 FGIYLEGKEKAYRKALTAFIDEYTSSYKLTQNDKNTMRESNLIKLIENKSSKNIYSLLDT 209 Query: 128 NLQALVNLCSRRLQ----KRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 ++ V C L L +++ + + + + E Sbjct: 210 DIMKRVISCLINLNNEQIANLTDSSYAGLVIHITIAINRIMHNEIIEPDSRLDEDIEHDR 269 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD-PLRDAHQRDRQLRQSIKRLV 242 ++ +A I ++ +P E ++ L ++ + + +R+ L + ++ Sbjct: 270 DYSLAVIIASSLEKEFDIEIPEIEVTYICLHIRASKMQNTSNSKSSKRNNTLVSLVYEMI 329 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + + + D L H+ L R + I N L ++ YP + + + Sbjct: 330 EAYDPDISYILEQDDAFIDGLIAHMQPTLVRLTNGLAIRNPLLDQIKSDYPDIFKKCKKV 389 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQII---LLTGNDSEREAQIEQQ 358 A E + + + + E+G +AV FGA +++ E + K+ + ++ + I+ + Sbjct: 390 TAMLEEKLNLKVPESETGFLAVHFGAAVVRLEQNNLSKRTVYVGVVCASGIGISRFIKTK 449 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 L ++ ++I+ K L + R ++ M +P +I+ + +T + Sbjct: 450 LEKVFGNRISIETYG-KGDLDSNTIRKTDFFVSNINMEVPD-GADIIFINPLITDSDIKN 507 Query: 419 I 419 I Sbjct: 508 I 508 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 99/321 (30%), Gaps = 25/321 (7%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R QI L L ++ ++ GV ++ L+ + L+ + Sbjct: 8 RLGQITLNLLMQDSPVSVKYLADSVGVSKRTVQRELEYIESS-LKKYNLSFQSKAGTGVW 66 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +EG ++ L L L S + + LK + FY L Sbjct: 67 IEGDKSDKEK-LTALLMADDTLDVSNKDERIKKLILELLKESEPQKLFYYANMLGVSEAT 125 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA-ESCLEFQVAQEIGRH 194 S L + + D L L + + G + + E +++ Q Sbjct: 126 VSNDLDEVAKWFDKFKLSLVRKQGFGIYLEGKEKAYRKALTAFIDEYTSSYKLTQNDKNT 185 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN-HFRELGNVRF 253 + L + + D +++ I L+N + ++ N+ Sbjct: 186 MRESNLIK------------LIENKSSKNIYSLLDTDI-MKRVISCLINLNNEQIANLT- 231 Query: 254 YDEQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 L H+ A+NR + I D+ L E+ + R + E E+ Sbjct: 232 ---DSSYAGLVIHITIAINRIMHNEIIEPDSRLDEDI--EHDRDYSLAVIIASSLEKEFD 286 Query: 312 VHLSDEESGLVAVIFGAWLMQ 332 + + + E + + A MQ Sbjct: 287 IEIPEIEVTYICLHIRASKMQ 307 >UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D786_9CLOT Length = 673 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 68/424 (16%), Positives = 151/424 (35%), Gaps = 30/424 (7%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++ +R +L L T+ S++ + S D+ E + IL + L L Sbjct: 113 PSTSEERVEYLLNDLLSRRDYVTIDALSDILYISRKTISADLKEVEK-ILEAYSLKLAKR 171 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + R+EGT N+RLC+ + I + + AL G A + + T + Sbjct: 172 PNYGIRIEGTEFNRRLCIAN-----------IIIGKESEALAE-----GEAEHQENMTRV 215 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 V S L +++ + + + ++ E+++AQ Sbjct: 216 ARCVAEVIDTENFTVNSVAYQNLIVHICIAVQRIQENCYVPLDEERQERIRRSKEYRIAQ 275 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR-------QLRQSIKRLV 242 +I + P E ++A+ + + + + + + +++ Sbjct: 276 KITERLNQSFAIRFPDQEIAYIAIHLAGKQSLFLPEQERTGEAGGQVISEETWEVVSQML 335 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + E F + L L H+ R + + + N L ++ +P + Sbjct: 336 DAVYEAFLFDFRSDLELRMNLAQHIVPLAVRLQYNMKLKNPLLKDIKARFPMAYAIALHS 395 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQLR- 360 + YG L D+E G +A+ F + ++N +L +K I+++ + + + R Sbjct: 396 SSILTERYGHELKDDEVGYLALAFALAIERQNTELPKKNILIVCASGKGSAQLLHYRYRQ 455 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSP-PLIYTDLTLTTHQQEQI 419 E I+ V + + + T+P+ P P+ L + + + Sbjct: 456 EFGSYVGRIETCDVSNVKKVDF-KDIDYVFT--TVPIQEKVPVPVQEVKYFLESADIQNM 512 Query: 420 RKML 423 +K+L Sbjct: 513 KKVL 516 >UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ5_9ACTN Length = 616 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 77/433 (17%), Positives = 146/433 (33%), Gaps = 18/433 (4%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 P+L + +R +L L ++ SLD+ + R IL + Sbjct: 36 PSLVHGVPATRAERVVYLLNDLLMRNDWVFADDLADACACSRSTLSLDLRDVER-ILNRY 94 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 L L RV G LN+RLCL G C PA S R Sbjct: 95 DLVLERRPRYGMRVSGLELNRRLCLAAS-AMGDATCLLGGIGDAAPA-PSSAPESLFQRM 152 Query: 123 FYDDTNLQALVNLCSRRLQ---KRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 +L+ + L + L +++ L++ +AG Sbjct: 153 GMQRESLEVIAASVEDALTDGPININAISYQNLLVHIAIALVRINAGCYVPLASEDMSDI 212 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQR-----DRQ 233 E E+ A+ + + R +P +E ++A+ + R D L + + Sbjct: 213 ERRSEYAAARRVAGGIKSRLGMELPEEEVAYIAIHLAGKRTLNDALSNEEPEGGLVISDE 272 Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 + + +++ R + F ++ L L HL R + + N L + YP Sbjct: 273 IWALVSDMLDSVRTHFHFDFDEDIELRMNLARHLVPLAVRLRSQMNLKNPLLGDITTHYP 332 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL-MQENDLHEKQIILLTGNDSERE 352 A E+G S++E G +A+ F L Q + K+++++ + + Sbjct: 333 LAWSMAVDACEVLHREFGTAPSNDEIGYIAMAFALALERQRSQAPRKRLLVVCASGAGSA 392 Query: 353 AQIE-QQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSP-PLIYTDLT 410 ++ + +E +I+ V R + T+P+ P P+ Sbjct: 393 RLLKCRCQKEFGSYVESIETCDVMHVADVDFSR-IDYVFT--TVPISAKLPVPVREVPFF 449 Query: 411 LTTHQQEQIRKML 423 ++IR +L Sbjct: 450 FDDAAADEIRDLL 462 >UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDU8_BACSK Length = 688 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 67/418 (16%), Positives = 147/418 (35%), Gaps = 14/418 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 ++ +R +L L + ++ V D+++ E L + L Sbjct: 85 FTSDERVGLLLALLLDANEPVKLFALAKELNVTPATVGSDLTK-AAEWLEQFGIKLIRKR 143 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 V+GT N R + L +F + + +++E+ R + +F D ++ Sbjct: 144 GYGIAVKGTETNIRQAMSAILSENLT-EEAFYEAVYAGQMQNEVASRLL--HFVDLETIR 200 Query: 131 ALVNLCSRRLQKRFESRDIHF---LCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 + + R +K F+ L ++ + + G + + Q V Sbjct: 201 LVQSTIQRVKEKHFDDMADQSFIALVVHATLAIERIKQGEQIRMDAGQLEALHKEDSLPV 260 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQRDRQLRQSIKRLVNHFR 246 AQE+ + +P E ++ + R+ Q + +L +K+ + Sbjct: 261 AQELAEALAQTFQITIPEAEIGYLVMHLRGARIGHIQGEPFEQSNAELAGRLKQFIAGME 320 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + +V + L L HL AL R + I N L E+ Y L T + Sbjct: 321 QDLSVSLAE-PSLFQGLLAHLKPALYRVRQGMKIHNPLLEKVKADYAALFAVTAKQAS-- 377 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 ++ + L + E G + + FGA L + +++ + + ++R+ Sbjct: 378 KAFAPLKLPEAEIGFLTLHFGAALERRKRSVSLSALVVCSSGIGSAKMLASRIRQEFPEI 437 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 +I + S+ + P L I+ T+ + + + LT + I+ ++ Sbjct: 438 SSITNASLFDLDKYD-PANFDLFIS--TVKVETNNRQALRVSPMLTADEASLIKANID 492 >UniRef50_P96574 Putative phosphotransferase enzyme IIA component n=6 Tax=Bacillus RepID=MTLR_BACSU Length = 694 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 73/420 (17%), Positives = 144/420 (34%), Gaps = 14/420 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 SA +R+ IL +L + + T + V + S D+ E + I LTL Sbjct: 84 HEYSADERKLLILCSLLESQEPVKLYTLAHDLQVTNATVSYDLDELEKWI-SPFGLTLIR 142 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 ++ G +R + L F+ + + Sbjct: 143 KRGFGIQLIGPENAKRK-IVGNLIVNRLDIQMFLEAVELNIKGKTDSSEKMFGVVSKGEL 201 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCL--YLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 L+ L + + F D ++ L +L Y + + G T + + E+ Sbjct: 202 LKMERILFQLKEKIAFSLSDSSYIALVVHLTYAIERIKLGETITMEQNELEELMNAKEYS 261 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI--KRLVNH 244 A EI +R +P E ++ + + ++ +L ++ KRL+ Sbjct: 262 SALEIAGELERAFGVTIPEAEVGYITIHLRSAN-RKYKTEYKAQEIELETALQTKRLIAF 320 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + + L + L HL A++R I I N + E+ R Y L Sbjct: 321 ISDKIRMDLTKNYSLYEGLIAHLEPAVSRIKENIEIYNPMKEQIKRDYFLLYMAIE---E 377 Query: 305 GFESEY-GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 G E + G+ SD+E + + FG+ L + + + + +++ + + +L+ Sbjct: 378 GVEKYFPGMSFSDDEIAFIVLHFGSALEIKKEEAKVKALVVCSSGIGSSKMLASRLK--K 435 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 LP G A +I T+P+P + I L Q+++ + Sbjct: 436 ELPEIESFDMSSLIELKGKDVQAYDMIVS-TVPIPYENIDYIMVSPLLNEEDANQVKQYI 494 >UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAI9_9FIRM Length = 696 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 66/430 (15%), Positives = 154/430 (35%), Gaps = 20/430 (4%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 + QRR + + + + ++ V + S DI + H L L Sbjct: 92 YTKEQRRALLTIEFLKRKHIEKLGYYAYKLMVSEATISNDIQAVRPWFQK-HSLALERKA 150 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCP--SFITSQFT-PALKSELKRRGIARNFYDDT 127 V G N R + +L F S+ AL+ + + Sbjct: 151 GLGITVTGEEENFRSAIIDFLNEKLMRADVEQFQDSRGEFRALEYFQNLGKNSNMDLLNE 210 Query: 128 NLQALVNLCSRRLQKRFESRDIHF----LCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 + V ++ + F SR L ++L + + +G T R + Sbjct: 211 EILDKVIKILKKCEDEFLSRITRHSYIGLVIHLVIAIERLLSGKTITMEEELLRALKEDP 270 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQL-----RQSI 238 ++ A+E+ +++ VP E ++ + R+ + + + L Sbjct: 271 YYKKAKELTAYFEEEFHIEVPESESAYVFMHLKGARMKYAVEKQDELTKMLDEYDCMIVA 330 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 L+ F L F ++ L L +HL L+R + + ++N L ++ + + Sbjct: 331 DDLIAAFGRLMGDDFSQDKVLYQGLASHLRATLHRLNYHMRLENPLLDQIKEDFRDIFAI 390 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQII----LLTGNDSEREAQ 354 ++ E++Y + ++++E ++ FGA + ++ ++ +I ++ + + Sbjct: 391 CKSVCKVMETKYHLEVNEDEIAYLSFHFGAAIERKKAQIKQSVILNVAVVCASGIGISSF 450 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 + ++ + + +SV+ A G +II+ T+ LP P++ L Sbjct: 451 LSSSIKSRFAGTVRVSPLSVEQVALREA-EGMDIIIS--TLKLPDQGIPVMEVGALLKEE 507 Query: 415 QQEQIRKMLE 424 +++ E Sbjct: 508 DFGRMQAYFE 517 >UniRef50_Q8EMT4 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMT4_OCEIH Length = 685 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 65/415 (15%), Positives = 136/415 (32%), Gaps = 25/415 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS R +L+ + ++A F+ + + D+ + L +QL + Sbjct: 86 LSEVDRVKFLLIMILGGKEPLSLAHFTSQLSISKNTVLNDMKQAQNH-LNAYQLEIQYSR 144 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y++EG R + L+ L + R Sbjct: 145 KDGYQIEGDEFQARKVMIWLANDIILHSDEKEKLHEALQLEGSLLEQFHRR--------- 195 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + +L F + + L + G Q ++ + E+Q +E Sbjct: 196 --LERVENKLHIEFTDEKLMTMPTIFSLILRRIRKGFQIQPLSIRYDELSNTKEYQATEE 253 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I + +P E LF+ L V L +I ++V F + Sbjct: 254 I------LYDKSLPVPEKLFITLNLLTGSVHRNQLLIEDSIPDLVPAIDKMVRLFEKNAC 307 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F D + L D+L HL A R + + + + ++ + AL Sbjct: 308 IIFQDREQLIDKLLQHLTPAYYRIKYKLTDAIVFESTYNEEFEQIRHLIKRALEPISEVM 367 Query: 311 GVHLSDEESGLVAVIFGAW--LMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 + + E + ++ W + E+ + + I++ + QL+EL + Sbjct: 368 ESKIPENEITYIVMLVSGWMHMQGESMTEKVKAIVVCPQGVSVSRLMFHQLKELFPEFVF 427 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +SV+ FL G ++ +P + L + L ++++RK + Sbjct: 428 LDSLSVREFLTYGL--EYDVVFSPIALETEKN---LFISKTMLRPEDKQRLRKQV 477 >UniRef50_B8DAX2 PTS system IIA 2 domain protein n=22 Tax=Listeria RepID=B8DAX2_LISMH Length = 689 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 66/417 (15%), Positives = 153/417 (36%), Gaps = 24/417 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R I+L L ++ F V + D+ + + +++ L + Sbjct: 87 SEKERASLIILMLTTGSEELSLNHFISELEVSKNTVLRDLKLVQKTLEKFN-LEVKYSRM 145 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 Y ++G NQR L + + SF ++ + + + L+ Sbjct: 146 RGYLIDGDEWNQRTALIYAAEH---IIESFGGEEY--------LQDFMQVDEARIKELRE 194 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFN-PLQRRWAESCLEFQVAQE 190 + L F + L L+ + G T + + E+ A+ Sbjct: 195 KLEQVEHHLNLHFIDNKMQILPYILEAVFRRMKKGQTITTSFLIDYNELSDTREYGAAEI 254 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 +P E +++ L V + +LR +++++++ F + Sbjct: 255 FIEE-----EPNMPEAERMYITLQLLTSNVLPKQYLKSEETHKLRLALEQVLSEFEKKAC 309 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 ++ D++ L ++L+ H+ A R + + D ++ ++ + + + + +LA E Sbjct: 310 IQLVDKESLLEKLFAHIKPAYYRIKYHLTTDYSILDKIDQEFQAVHYIVKESLAPLERFI 369 Query: 311 GVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 G + + ES + + G L++ E + +++ N +E+ LR L Sbjct: 370 GSKVPENESIFITLFIGGHLIESTEKLQTRLKAVVVCPNGLSISRLMEKTLRSLFPEIFF 429 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 + MS++ F QT G ++ + +PL + L + E R+++ S Sbjct: 430 YQAMSIREFEQTKL--GYDIVFS--AVPLSTDKKFFLINQLMDGKERLELRRRVMRS 482 >UniRef50_Q5WCM9 Transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCM9_BACSK Length = 686 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 75/416 (18%), Positives = 152/416 (36%), Gaps = 25/416 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L+ QR ILL L ++ F G + D+ + +E + QL + Sbjct: 88 LTEEQRVHFILLMLLAKKEELSLLHFHSQLGYSKNTILNDLKKV-QEFVTPFQLVVRYSR 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y +EG L R L H + T + + +++ + I + + Sbjct: 147 KYGYLLEGKELQIRKLLIH----LTEVVVQTQTGRRQLEIGTDIGKHEI-------SEVH 195 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 A + ++L +F + + L L + G P++ E+Q +E Sbjct: 196 ACIEKVEQKLGIQFTDEKLMAMPYILTLVLKRISIGHVLPPFPIEYDELSDTKEYQATEE 255 Query: 191 IGRHWQRRALQPVPPDEPLFMAL-LFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 I RH + VP E LF+ L L + R +A + L ++ ++ F + Sbjct: 256 IFRHLK-----DVPKQERLFVTLYLLTTSRYWTEWVNAEEELPDLMPALADVLRLFEKSA 310 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + + L +L H+ A R + + Y L + +L E + Sbjct: 311 CIYLQERDLLLKKLIQHIKPAYYRMKYELTAVEAAKPILPDEYKELHHIVKRSLGPLERQ 370 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQI--ILLTGNDSEREAQIEQQLRELTLLPL 367 G + + E V ++ G+W+M++ + K+I I++ + ++L EL + Sbjct: 371 LGKRMPEAEKMYVTMLIGSWMMRQGESINKKIKAIVVCPQGVSVSGFMLKELSELFPEFV 430 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +SV+ F L+ + + + L T L + ++R+ + Sbjct: 431 FLDSLSVREFQTCDL--AFDLVFSQTPLET---NKRLYMTSSLLRKEDRARLRRQV 481 >UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9M5_9FIRM Length = 698 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 146/432 (33%), Gaps = 19/432 (4%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 RR ++L L + + + +S+L GV + + D+S G + + H L L Sbjct: 85 GEPTDVAGRRNRLLFELIRDKVPRKIYYYSQLLGVSEATINKDMSALGPWLEQNH-LKLV 143 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + G+ + R + ++ L + I A + + R T Sbjct: 144 KRQGFGVALSGSERDLRAAMRRYVSENMSLPWAGIEGLKESAAGALIHTRDQNLYALLAT 203 Query: 128 NLQALVNLCSRRLQKR------FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + + V R++K L +L + + G + +P + Sbjct: 204 DTVSRVYEVLARMRKEETRLKGLAESAYTNLIFHLAIAVERVKKGAIVEEDPGLVNKLGT 263 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-----DRQLRQ 236 E+ +A +I +R +P E ++ L ++ +A R + L + Sbjct: 264 WDEYALAGKIRGEIEREFSIHMPDQELSYILLHLLGSKMAYHETEAENRQFLFPEEDLLE 323 Query: 237 SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 I R+++ F ++ L HL A+ R + I N + E R YP + Sbjct: 324 IIDRMIDQFDTEMANSLKCDEEFIRGLIMHLQPAMFRMSEKMSIYNPVLPEIKREYPEIY 383 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLM----QENDLHEKQIILLTGNDSERE 352 +R A E +SD+E G +++ FGA + +E I ++ + Sbjct: 384 AKSRRAAEVIRDETAFEVSDDEIGFLSMHFGAAVERVRKREGKRRRVSIGIICSSGFGVA 443 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLT 412 + +L + + ++ L R + + I + Sbjct: 444 QLMIARLTRVFGQEAELSAYALSD-LTEHVERRTDFFVTTFDWCADEIDS--IRVSPMVP 500 Query: 413 THQQEQIRKMLE 424 E+IR +E Sbjct: 501 ESDLEKIRNKIE 512 >UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 Tax=Bacillus cereus group RepID=A0RA54_BACAH Length = 651 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 61/422 (14%), Positives = 143/422 (33%), Gaps = 22/422 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S +R IL + ++ +E V +L + + +I +QL + Sbjct: 95 PTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKSTVNLIMKDVT-DICGRYQLQIEKR 153 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 R+ G + R CL + + P ++ + + Sbjct: 154 PYYGIRIVGEEFHIRSCLSQYGLPRYDHTP----------FHERFEQNDTYVSLPHIPLI 203 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 ++++ +I L +++ L + + ++ E+ +A+ Sbjct: 204 RSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKGLNAEQSELIIKKEYTIAK 263 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRD---RQLRQSIKRLVNHFR 246 +I ++ P +E L++ + V R + + + L ++ ++ Sbjct: 264 QIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAFMQHILFKVA 323 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 E N+ FY ++ L HL LNR + + N L E + YP Sbjct: 324 EERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVKKNYPYAFEIAVLVGDII 383 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 G + + E G +A+ FG + + + +K+ +L+ ++ ++ L+ Sbjct: 384 GEYTGESIPESEIGYIAIHFGGAMSRLQEQNQKKRCLLVCATGQGSAQLLKYKI--LSQF 441 Query: 366 PLNIKHMSVKAFLQ----TGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 ++ + + + Q II+ +P L P+I + + + I + Sbjct: 442 RDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLP-VPVIKVNSIFDDKEIKSIGQ 500 Query: 422 ML 423 L Sbjct: 501 QL 502 >UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MET8_9FIRM Length = 671 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 69/409 (16%), Positives = 138/409 (33%), Gaps = 21/409 (5%) Query: 19 QILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEG 78 ++LL G E V D+ T IL+ H L + RV G Sbjct: 116 RLLLNSLNSGERIDFFDLEEELFVSTSTLKKDL-RTIDGILKKHDLRIRDTKKEGMRVAG 174 Query: 79 TVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSR 138 R C+ ++ T ++ + NL+ ++ Sbjct: 175 QETKIRFCISEYI-----FNSQKDTGDIGNKFYKDMFSSD------EVENLRIILMEAIT 223 Query: 139 RLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRR 198 R L ++ L + +++ + EF+ AQ+I + Sbjct: 224 DFNLRLTDIAFRNLLVHSLIMLKRFEKKRHVKYDEEEIELFSGTKEFRCAQQIITEISGK 283 Query: 199 ALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQG 258 + DE ++ L + D + ++ I+ ++N R + D+ Sbjct: 284 LGISLG-DEVYYLTQHLIS--SQRFLIENLDGDYEYKEEIEDILNTIRSGTGIDLSDDNQ 340 Query: 259 LCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEE 318 L + L HL+ AL R F + I N + LYP A E ++ + + E Sbjct: 341 LINGLAMHLSAALQRLRFDMNIRNEFLDSIKNLYPLAFELAVVAGEVIEKKHKLKAKESE 400 Query: 319 SGLVAVIFGAWLMQENDLHE---KQIILLTGNDSEREAQIEQQLR-ELTLLPLNIKHMSV 374 G +A+ FGA L ++ + K+++L+ ++++L+ + +K V Sbjct: 401 IGFLAMHFGAALERKGLNRKQEPKKVVLVCIAGIATALLLKEKLQHKFGQYIEIVKSCPV 460 Query: 375 KAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + GA L++ +P S + L L + ++ Sbjct: 461 QDVDEELI-DGADLVLTTVELP-DFQSEKIKKIKLFLDDDDLNHLATVI 507 >UniRef50_C9A0D6 BglG family transcriptional antiterminator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A0D6_ENTGA Length = 698 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 64/418 (15%), Positives = 144/418 (34%), Gaps = 23/418 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 +++ +R+ I L LF ++ F V D+ + +E L +T+ Sbjct: 85 EMNSEERKKYIFLMLFYYESDYLSVNHFLSALRVGKTTFMADMKKLEKE-LSLSMITIGY 143 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 Y + G N R + F + + ++ + Sbjct: 144 TRKNGYGLIGNEENLRNFFMKMMFHDFGDNQEEFVYHYF-LVNEKIDGFSQVEGIAREKL 202 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 + L RL + +L + L + +N + E+ A Sbjct: 203 KTFSLELVENRLN------EFSYLFTMILPRLNKQWQDFYETYN---YQTFFQMKEYLFA 253 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 +E+ + L++ + + D + + + ++R++ F L Sbjct: 254 KELLMEFG-----ITNKSAQLYICGWLLGMALGDTTYPSADFSI-IHELVERIIKRFELL 307 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 +RF D+Q + +QLY+H A R F + I N L ++ Y L + + L + Sbjct: 308 SGIRFKDKQKVINQLYSHFRPAYYRLFFQLPIINPLHKKIIEEYEDLYQIVQETLRPIGN 367 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 + + ++E + + F + + E +++K +++ N A I +L+ + Sbjct: 368 LFERGIPEDEVSFLTIHFASLINDFDEYQVNQKIGVIVCPNGIGSSAMIYNELKMIFPDI 427 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYT-MPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + I + K L LI + L P+ + +T ++ Q+ + + Sbjct: 428 IFIGPIETKELL--LERPECDLIFTTVPNVSLYTLKKPVYVVNPIMTNEERNQLIQEV 483 >UniRef50_B6G219 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G219_9CLOT Length = 619 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 66/419 (15%), Positives = 153/419 (36%), Gaps = 10/419 (2%) Query: 9 SVLSAPQRRCQILLTLFQP-GLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 + +S +RR +IL L + ++ SE V D+ E L + + L Sbjct: 108 ADISVEKRRIEILRDLLLKSDMKTSINKLSEKYFVSKTSIVNDLKYIEDEYLSKNNIRLN 167 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 +G+Y + G+ ++ R C+ + L ++ + T KS Sbjct: 168 RTLNGTY-ISGSEVDIRKCIAN-LIECISNEENYNIDERTRIEKSTFDDLANVFGIESIR 225 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQF-NPLQRRWAESCLEFQ 186 ++A V L L ++ C+ + G + + ++ + + Sbjct: 226 FIEARVKELEVDLNCEICEPYYINLITHILICIRRIKEGNKIKVHDDVESNIIKEDFRYI 285 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 ++ + ++ + E ++ R+ + + + +++ Sbjct: 286 AVIKLIKKIEKEYSILLDNQEVSYIYKYIVSSRIENDIDFEDINEELYESIASEMIDFMS 345 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 EL N+ + L L H+ +NR ++ I I N L ++ + + T+ + Sbjct: 346 ELLNINLKMDNILKQGLIMHIKPMMNRLIYDIQIKNPLYDDILNHFNDIFILTKIVVFVI 405 Query: 307 ESEYGVH-LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 +Y + +SD+E + F A + + ND+ K+++++ + + +L++ T+ Sbjct: 406 SEKYKMSNISDDEISYLTTYFQAAIERNNDI--KKVLIVCHSGYGTSQFLASKLKQ-TIP 462 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 +NI + L + II+ T+ I LT I+KM++ Sbjct: 463 NINIVDIISSRKLNKETVKNVDFIIS--TVETDFKGKEHIIVSALLTESDINNIKKMVD 519 >UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03XN7_LEUMM Length = 663 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 60/412 (14%), Positives = 145/412 (35%), Gaps = 22/412 (5%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R+ IL L + +E V S D+S R++L +++++ + + Sbjct: 96 DRQKYILNKLIIENQKFLIDDLAEKLFVTRTTLSKDLS-IIRKVLMPYRISVESKANIGV 154 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + G ++R + + S +++ +K + + D +++ Sbjct: 155 FITGLERDKRHFILDY-----------FFSHSENSIQHYMKNKSFFKAISFDQITIIVLD 203 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 C R I + LY+ + + G Q P+ E VA++I Sbjct: 204 EC-REAGIHLTDFTIQNIVLYIALSVQRLKCGFELQAAPVDIN-PEIRNVSDVARKIFSR 261 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + P E ++ + +++ L++ + ++ + Sbjct: 262 IESGLALKFPESEVDYLTIQLMAQGKNINIQNDGP----LQRDLDMILQRIELETDYPVT 317 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 + L + HL + R I + N L +E Y T+ + + Sbjct: 318 KDYALKKNIIEHLKPMIVRLEQGIQLKNPLLQEIKTNYLSEFMDTKRYIKWSPYLSRFDI 377 Query: 315 SDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSV 374 +D+E +A+ A + +L++ + +++ + ++ + + LNI + + Sbjct: 378 NDDEVAYLALHLMAAAEKYKNLNKPRALIICATGYGSAQLLNNRVEKEFGMYLNI--VDI 435 Query: 375 KAFLQTGAP--RGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 K + + LII+ + +F P+I + LT ++I + L+ Sbjct: 436 KGYYEVDDTTLSNVNLIISAIDLSTRVFKVPVIQVSIFLTEADVQKINEFLD 487 >UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=Clostridium difficile RepID=Q184K6_CLOD6 Length = 656 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 52/430 (12%), Positives = 149/430 (34%), Gaps = 15/430 (3%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + +R I L + T+ S+ + D++E + +L+ Sbjct: 80 LDNKGSQIPTTREERVIYIYSVLLKSNDYITIQQLSDELYISRGTIERDLAEVEK-LLKN 138 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 +++ ++ + ++R ++ F +I + ++ K + Sbjct: 139 EGISIYKKPSKGIKLNISERDKRQLTAKFI-HKFWSRNWYIKQEQESFYQAFEKIQADVN 197 Query: 122 NFYDDTNLQALVNLC---SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + + +L ++++ SR + F + L ++L + + G + + Sbjct: 198 GIFSEDDLSIIIDILRNFSRERKFEFSDYEFQSLVIHLAIAVERIRKGEYIEESLYIGN- 256 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 + + + + + +P E ++ L + ++ Sbjct: 257 -IENNQMSNTNYLAKQLEEKFSILLPKSEIGYINLHLVASDQHRDNNELKNTSTNPCETS 315 Query: 239 KRLVNHFRELGNVRFYD---EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 +++ RE+ Y+ ++ L D L +H+ ++NR + + I N + + Sbjct: 316 TNNISNLREIIKNTLYETAYDKDLIDGLTSHVHSSINRLKYGLSIKNPYVNTIKQNFSLS 375 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL-HEKQIILLTGNDSEREAQ 354 E Y + ++D+E +A+ F A+ + +L ++IL+ Sbjct: 376 FEQALDLKKVIEFIYDIRINDDECAYIALHFEAFRERMKELPQNIRVILVCSTGLGSSRL 435 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 + ++++ + K +SV+ + + + T+ L L + P I L Sbjct: 436 LSARIKKYFPMIKIEKVLSVQELVSSK----IDADLVISTIYLELETIPTIVVSPILNES 491 Query: 415 QQEQIRKMLE 424 + + ++ Sbjct: 492 DIRTLERNIQ 501 >UniRef50_D2EIK0 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIK0_PEDAC Length = 700 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/418 (15%), Positives = 143/418 (34%), Gaps = 21/418 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L A RR ++ + T+A +E+ V + D + L+ + LT+ Sbjct: 87 LDAHSRRIFLIFLMLTESSFNTLAKMAEILEVSRNTIVHD-QKIITVFLKKYHLTVIGNR 145 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + + G ++ R ++L+ I + K + I + ++ Sbjct: 146 K-GHFISGNEVDIR----YFLQNN----SVKIATVLAEVSKQKGDFDEIRSIMNLRSVIE 196 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPL-----QRRWAESCLEF 185 + + +R F L + L + G Q + + EF Sbjct: 197 SWLESIEQRSFLNFTDDGKKHLENFYMLVLNRILRGHILQSGEMFTSGMDYHHLQKQNEF 256 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSML-RVPDPLRDAHQRDRQLRQSIKRLVNH 244 +A+E+ +E F+ + + L++ K +V++ Sbjct: 257 MMAKELLTKLGLDLRAKY-EEEIYFLESMLLGTPKNEIGFSGESDVKNTLKKVTKEIVDN 315 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F++L + +E L + LYTHL R + + L + Y + T+ +L Sbjct: 316 FKKLSGMNSNNESQLLNDLYTHLVSTFYRVKYNHQYRDGLVTQIKGKYFNVYTYTKMSLQ 375 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 FE HL++ E L+A+ FG+ +++ + ++L+ +++++ Sbjct: 376 PFEKLNVGHLNENEISLIAIYFGSQMVR--QAKQGTVLLVCSAGLGTSRLLKEEILAHFP 433 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 I ++ + +I T S +I LT ++K+ Sbjct: 434 DVNVIGPITKSEY--NNIQTDDYPLIITTTPLNSQPSNKVILLSPILTQRDLILLQKL 489 >UniRef50_B0P1K3 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1K3_9CLOT Length = 694 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 79/420 (18%), Positives = 150/420 (35%), Gaps = 13/420 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 V S R+ ILL L F+ L + D S D+ E L ++ LTL Sbjct: 92 PVYSKADRQMIILLELLTINEPLKYFYFTSLFHISDATLSNDLEEVET-WLDHYNLTLYR 150 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 EG + R + LR+ R + LK + + + DDT Sbjct: 151 RPGMGIYWEGKEEDYRQAVTMVLRQKLRGHSLKVLFDKEKKLKERMFPN-LTQEVLDDT- 208 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 + ++ L + I L LYL + G + + E+Q+A Sbjct: 209 -RDIIKNMQGVLDIEYTDHSIRHLSLYLLITQNRVRTGHEIKEEKDVKS-ITHLPEYQIA 266 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH--QRDRQLRQSIKRLVNHFR 246 + +G + E +A+ ++ + + ++RQ + R++ Sbjct: 267 KWLGGKLSNFERHQLSQGEVYNIAMQLLAAKIWKNKSENKIDEESFKVRQLVMRIIAEME 326 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 L + F++ L D L H+ A+NR + +N + Y ++ T A Sbjct: 327 ILLEMEFFENAVLIDGLCNHMKPAINRMKQGVFTENQYIDFLEEKYSKVYVATIKACEFL 386 Query: 307 ESEYGV-HLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTL 364 + E + L + E G +A+ F + Q+ D EK + + + + L++ Sbjct: 387 KEELHIKKLPEGEMGFIALYFCVAVEQQKDKEEKLSVYVACPHGVGTSHMLAVHLKKEFP 446 Query: 365 LPLNIKHMSV-KAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + K +S + + G I++ + L P +Y + LT ++ I M+ Sbjct: 447 QLMVQKIISTAEIKEEELIEEGIDFIVSTAKLNLTF---PNVYVNSILTETDKKMINAMI 503 >UniRef50_A6LQ03 Transcriptional antiterminator, BglG n=3 Tax=Clostridium RepID=A6LQ03_CLOB8 Length = 683 Score = 168 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 67/421 (15%), Positives = 137/421 (32%), Gaps = 9/421 (2%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + P +LS QR+ I+ L + F V SLDI E L Sbjct: 79 LDMVPIPWLLSKEQRQIVIICELLVSNEPLKASYFCHKFNVVMGSISLDIDNIE-ERLIS 137 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 L + ++G+ N+R L L F+ I + + +K + Sbjct: 138 KNLCVIRKRSYGISIQGSEWNKRNALVE-LFFDFKPFEDLIAFLYDEKVDPIVK--TLFN 194 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCL--LQHHAGITPQFNPLQRRWA 179 + + +Q + ++ + D+ + L++Q L + G + Sbjct: 195 IVFGNEAIQLVKDILKDIDFDYLKGNDVKYFSLFIQVLLSIKKTKNGEIIYLPQEIKNSI 254 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK 239 S E++ Q +G Q+ + DE +++ L S + + + D K Sbjct: 255 LSLEEYKKIQYLGSVLQKN-NIDICEDELVYLCLYLSDYKYFFNNKHLIESDINYENIAK 313 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 + V ++ L L H Q + + N L E Y L + Sbjct: 314 EVTEEISTKIYVDITKDEQLIRDLTQHFKQTFYMLNLGLKVINPLINEIKEHYSELYKII 373 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQ 358 + S Y + EE G + + + ++ + + + ++L + + + Sbjct: 374 KNTCRLIFSRYNFKIPPEEVGYITMHIAVAVQKQQAMSKNIKALVLCPSGIGTARILCSK 433 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 ++ + I +S+ LI++ + L LI +T E Sbjct: 434 VKSIFNEINVIDVVSLHDINSIIDKNKYDLILSTVPVNLKTK-HNLIVVSHFMTEVDIEN 492 Query: 419 I 419 I Sbjct: 493 I 493 >UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Bacillaceae RepID=C1PAW0_BACCO Length = 639 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 64/411 (15%), Positives = 138/411 (33%), Gaps = 27/411 (6%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL L + +F + V D+ +EIL + L L + Sbjct: 98 RVLYILRRLLLETDFIKIESFIDEMFVSLSTLQNDLK-MVKEILDQYHLKLINRPHYGSK 156 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 VEG +RLCL + L R +F+ + EL ++ ++ ++ Sbjct: 157 VEGDEYMKRLCLSNLLLE--RNQEAFLKEDCLQLIDPELFKK-----------IKEVIVQ 203 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + + + L ++ + G + + E VA EI + Sbjct: 204 KVNKYKIEISDISLENLATHIAIACRRIQEGFVIEELA-DVLVDDHPFEKIVANEIIKEV 262 Query: 196 QRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + P E ++ + ++ + + I ++ + N F Sbjct: 263 EDFTSLTFPETEIDYIIVHLLGTKLLHKKELAEFSKFDEAGTIINCMLARLKAELNWDFR 322 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 ++ L H+ A+NR + + I N L + + YP A E + + Sbjct: 323 QDREFIQALTLHIRPAMNRLRYKMNIRNPLLNDIKKKYPAAFEGAIIASKCIEEYLRMEV 382 Query: 315 SDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLRELT----LLPLN 368 ++E +A+ G L + N K+++++ + + +L+ L + Sbjct: 383 VEDEIAYIALHIGVALERMKLNKKKIKKVLIVCASGVGSAKLLSYRLQNLYGQEIEIADT 442 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 I + ++ ++ + LII+ + F P+ + L + I Sbjct: 443 INYYNLSSYDLSF----IDLIISTVPIK-EDFGVPVQVVNTFLEDKDIQAI 488 >UniRef50_A8RV91 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RV91_9CLOT Length = 633 Score = 167 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 64/417 (15%), Positives = 146/417 (35%), Gaps = 27/417 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R I L L + F+E + + D + +E + L L Sbjct: 79 YSDEERAYWIELRLLCHEDELSTYHFTEELQISKNTLLSDFKKV-QERVNRFSLELAYNR 137 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 YR+ G+ ++R L H LR+ + + +++ G+ L+ Sbjct: 138 KEGYRLYGSEYHKRELLTHALRKLLNMP----GGEENLNRIYGIRKEGVK-------ELR 186 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 A + +LQ +F + L + L++ T + + R + E+ V Sbjct: 187 ANIEEIENKLQLQFTDERLKELLYIFYFTLIRIKNEKTVE-AMDRYRLVTTTKEYSVVAA 245 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 ++ + +E + A+ + +V + + + LR + ++ F + Sbjct: 246 FADKYRIK-----DENEIVNFAVQIQISKVHNRVHEDIGNLELLRDAGMHMLERFESISC 300 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 VR + LY H+ A+ R + ++ + + Y L R A+ +E Sbjct: 301 VRLDGRAEFLEILYQHMKPAVYRIWYGYHVEPDITDMILPKYQYLHEIVRKAVRPYEVYL 360 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDL----HEKQIILLTGNDSEREAQIEQQLRELTLLP 366 D E + V+F +WL +E L +++ +++ N + L EL Sbjct: 361 TCTFPDPELVYITVLFASWLHKEGKLIQVQEKERAVVVCTNGLTVSQYLFVSLSELLPEI 420 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ +S++ F + + ++ + + ++ R+ + Sbjct: 421 EFLECLSLRDFYEYD--KDFQIVFSTVRLETDKKQ---FVVFPFANDIAKKSFREKV 472 >UniRef50_C9XST4 Putative transcription antiterminator n=11 Tax=Bacteria RepID=C9XST4_CLODC Length = 695 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 71/420 (16%), Positives = 147/420 (35%), Gaps = 23/420 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R + L LF ++ F V +LD + E+ + + + + Sbjct: 88 FSKTERLLYMYLMLFINMEDISINHFINSIKVSRSTVNLDFKDLIPELEKKN-IKVKNNR 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G + R L + + F +K N + Sbjct: 147 INGYYIVGNEMEIRRVLIKNIIETL--SNEKSSRVFDIFIKEY--------NLDSFEEAK 196 Query: 131 ALVNLCSRRLQKRF-ESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRR--WAESCLEFQV 187 ++ ++ + F E R I F+ +++ + I Q N S E++ Sbjct: 197 KIILKLIKKYEITFVEDRLIEFIYIFIFLKARMYSTRIVTQENVDIPNISVMSSMKEYKF 256 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A+E+ + P ++++ + V + D +D + + + +++ F Sbjct: 257 AKELLEVYGSEDKIK--PYNIMYISAWILGISVGNYEEDTEDKD-VISKIVNKMMTKFGY 313 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 L V + ++ + QLY+H A R LF + I N + E+ Y + R A+ F Sbjct: 314 LSGVYYISQEKIFKQLYSHFRPAYYRLLFKLPIYNPICEKVKEEYKLVYRIVSNAMKEFC 373 Query: 308 SEYGVHLSDEESGLVAVIFGAWL--MQENDLHEKQI-ILLTGNDSEREAQIEQQLRELTL 364 +G + +EE + + F +E D K+I +++ N A + +L L Sbjct: 374 GLFGEEIQEEELAYLTMHFATLFSNKKEFDGFRKRIALIVCSNGVGSSAILHAELTNLFP 433 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAP-YTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I P ++ Y P+I +TT ++ +I + + Sbjct: 434 DLHFIPMSESVGLENISEP--VDIVFTTNYNAEGLKTDVPVIKVSPVMTTKEKYKITREV 491 >UniRef50_D1AHL2 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AHL2_SEBTE Length = 681 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 71/418 (16%), Positives = 152/418 (36%), Gaps = 21/418 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R IL E V + D++ +++L ++L + Sbjct: 81 YSKEERTDYILANYLFNSQNLKQINLEENLNVSSTTVANDMARV-KDVLSLNKLEFNSYS 139 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL- 129 +EG N R + ++L FIT ++ E+ + + N++ D +L Sbjct: 140 KDFEYIEGAEKNIRRYILNFLLEYL-----FITKKY----PGEIMVKEVIENYFSDIDLN 190 Query: 130 --QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQF--NPLQRRWAESCLEF 185 + + ++ K L LYL + + G NP+ + S EF Sbjct: 191 YIREFIKKIQEKIGKIISDEAYKILTLYLLIMIKRVREGKVLGEIKNPV---FITSSDEF 247 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 ++ I ++ AL E + + + ++ QL + +L+ Sbjct: 248 KIISVIISSLEKNALVKFSNQEIMAFSEYVLGSHSYNFDYSYYENWIQLEILVNKLIVDI 307 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + L + L HL A+ R I ++N + EE YP L + ++ Sbjct: 308 NSKIDTNILGDNILFEGLLNHLKPAIYRIKQGIKLENAIYEEVLDNYPELFLMIKDSMTK 367 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 V ++D+E V + F + + + K +I++ G +++ +++ + Sbjct: 368 LIHYLEVEINDDEIAFVTIHFKEAIDRRAEKALKNVIIVCGFGYGSSKLLKENIKKYFEV 427 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + + + F + LII T+P+ P+I+ + LT E++ Sbjct: 428 NV-VNTLPMHKFEEITDFNNIDLIIT--TVPIKEEKIPVIHVNPILTKEDLEKLESYG 482 >UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLZ0_CLODC Length = 661 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 66/422 (15%), Positives = 147/422 (34%), Gaps = 27/422 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R +L L T+ +E + D+ + R IL + L L + Sbjct: 94 SPDERINYVLDILTMTNNPITIDDLAEEICIGRTTLIKDLKKADR-ILAEYDLELKRKPN 152 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + G ++ RL + L + + + YD L+ Sbjct: 153 IGMILVGEEMDIRLLILDRLYENYIDVLENV-------------NQINLVKDYDIECLRD 199 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + ++ + + + + Y+ +L++ G + + E+ + ++ Sbjct: 200 ELKKLFKKEELYITEQVLRDVERYIIMSVLRNLNGYKFEKIDKRFEVIRCSDEYTLGLKL 259 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR----E 247 ++ + E +F+ + + P ++ S+K +V+ E Sbjct: 260 KALLEKIFNIVLNEKETIFLTMPLIGRKAPS--TKLALSSIKINDSVKEVVDEVTSFLLE 317 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 + F +++ L + L HL ALNR F I + N L +E Y + A E Sbjct: 318 TSGIDFKEDKKLIENLEYHLYFALNRMRFNIRVKNPLLQEIKERYTFPYSVAKIAAMIIE 377 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQEND--LHEKQIILLTGNDSEREAQIEQQL-RELTL 364 ++ + + D E G +A+ FG++ + + L+ ++ ++ G I ++ + L Sbjct: 378 EKFDLKICDHEIGYIALHFGSYFEKNSRKVLNVNRVAVVCGTGLGTAQLIRIKIGKILGE 437 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 ++A + L+ L P+ + E I+K +E Sbjct: 438 SVEVNTFSDIEAKANLDLLKYYDLVFTTVDFKTDL-DVPIFRVNALFNE---ESIKKEIE 493 Query: 425 SA 426 +A Sbjct: 494 NA 495 >UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C483_LISGR Length = 691 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 78/423 (18%), Positives = 147/423 (34%), Gaps = 19/423 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + +R+ IL T+ + + + GV S D+++ E+ ++ Sbjct: 85 EYTPLERQQYILKTILKSDEAVKLIALANDLGVTVATVSNDLTKMEEELDESVRIE--RK 142 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGF------RLCPSFITSQFTPALKSELKRRGIARNF 123 R+ GT +R L + L F RL + SE I R Sbjct: 143 RGSGVRLIGTETAKRTLLTNLLGEQFSEANLFRLMQEQPEEEGAKQAASERLLHLIDRKL 202 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 ++ ++ ++L+ + L +++ + + AG L+ A+ Sbjct: 203 IQK--VEKVLRNWRQQLEYQITDDAYISLVIHIVISIDRMLAGHFI--YELRNENAKRYP 258 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI--KRL 241 EFQ A+EI VP E + + + + ++ K+L Sbjct: 259 EFQTAKEIIAECLEMEADVVPDGEAGLVTMHIRGAKALHYDSGDFTGNEHIQAVTVAKQL 318 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 + + R D+Q L L HL L R + I N L + + YP L +A Sbjct: 319 ITSVEAKIDRRL-DQQTLLKGLTAHLRPTLRRLHENMRIHNPLVKSIKQDYPELFDIVKA 377 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRE 361 A + DEE G + + FGA ++Q N+ I++ + + +LR+ Sbjct: 378 AFTEIYQSGN--VPDEEIGYLVLHFGAAILQGNEEKVYSGIVVCASGIGTSRMLVTRLRQ 435 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 ++ +S+ +II+ T+ L P + LT + +I Sbjct: 436 AIPALKKLQTVSLFELPLQMKKENYDVIIS--TIDLGNVDFPYFFVSPMLTEREVSEIEV 493 Query: 422 MLE 424 L Sbjct: 494 FLN 496 >UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan operon n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMS7_OCEIH Length = 648 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 62/430 (14%), Positives = 146/430 (33%), Gaps = 29/430 (6%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 + + QR I+ L + ++ + D+ R+ L +L + Sbjct: 88 TPNTPEQRVKYIVRRLLFTMDYIKLEQLADEMYISKSTIQNDMK-LVRQQLNPFELDIHV 146 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 ++ G + R C+ + + + + D Sbjct: 147 KPSHGIKIIGEEIKIRFCMAEFFVDRENHSHADVKTHC-------------EFVTLPDQQ 193 Query: 129 LQALVNLCSRRL---QKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES---C 182 + + N+ ++L Q IH L +++ +L+ G FN R + Sbjct: 194 MSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFNAAHREEMQDMKDT 253 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLR-VPDPLRDAHQRDRQLRQSIKRL 241 + VA++I +++ P E ++AL + V D+ + L SI +L Sbjct: 254 KAYFVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNIDSTDIESILDPSIYKL 313 Query: 242 V----NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 + E ++ + L L HL A+NR + + I N + + YP + Sbjct: 314 IMLSLEKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPMLTHIKKNYPLAFQ 373 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIE 356 A E + + + + E G +A+ GA + + K+ +++ + I Sbjct: 374 AAVYAGVVIEEKTDITIDENEIGYLALHIGAAMERNKLRKGPKRCLVVCASGMGTAQLIY 433 Query: 357 QQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPL-FSPPLIYTDLTLTTHQ 415 +L+ + ++ + + + + + ++P+ P+I + + Sbjct: 434 YKLK--SKFEGQMEVVGTTEYYRLRDYPLDDIDLIISSIPIKEDLCIPVIEVNAIIEEED 491 Query: 416 QEQIRKMLES 425 + I+ + Sbjct: 492 LQHIQSFISG 501 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 58/418 (13%), Positives = 140/418 (33%), Gaps = 26/418 (6%) Query: 14 PQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 R +L L + +E V + D+ R + H L+++ Sbjct: 96 EDRVAYLLKRLLLSEDYIKLDALAEELFVSESTVKNDLKAV-RHLFSLHGLSVSHRPKYG 154 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 R+ G + R C+ + + + + + ++ ++ R A Y Sbjct: 155 LRLTGEEMKLRYCMAEHVFQKAHANSTLLPEETYQFIQGIVRSRTKASGLY--------- 205 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 + L ++ + + + + FQVAQ++ Sbjct: 206 ----------LSEIGLSNLVTHIAIACKRIEEKKIVMMPETELKEIQVQPVFQVAQQMAE 255 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS----IKRLVNHFRELG 249 + P E ++A+ ++ H L + I +L+ + E Sbjct: 256 DIRHVLGIEFPLSEMAYIAIHLMGAKMMAYGDAGHTLFHLLEEDHFRFIHQLLAYVEEHM 315 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 ++ ++ L L HL A++R + + I N + R YP + + Sbjct: 316 SLNIQFDKELIVGLSLHLRSAIHRFRYGMNIRNPYLTDIKRHYPIAFEAGVYMGRWLKEK 375 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 G+ + ++E G +A+ GA + + H +K+ +++ + +L+ + Sbjct: 376 EGIEIHEDEIGYLALHIGAAIERTKSQHVKKRCLIVCATGVASSQLLLHKLKAAFSERME 435 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA 426 I + + + R II+ + L P++ L+ ++++ ++ A Sbjct: 436 IVGTASVGEMSSYDLRSIDFIISTIPLQNTLP-VPVVDVHTILSDDDIVRLKRFVQGA 492 >UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) porter component IIA/transcriptional antiterminator n=2 Tax=Bacillus pumilus RepID=A8F9J6_BACP2 Length = 639 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 71/415 (17%), Positives = 150/415 (36%), Gaps = 25/415 (6%) Query: 14 PQRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 P+ R + ++ + +E + S D+ + GRE+L + + L + Sbjct: 94 PEERVRFIMRKLLLQQDYLKIDQLAEELFISRMTVSSDLKK-GRELLARYGMALVSKPGF 152 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 ++EG L +R C L PAL +R + ++++ Sbjct: 153 GLKIEGDELQKRTCYADLLLEE------------EPALSHITEREQLHFPDISLETIRSI 200 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 V + + + L ++L + Q + R S + ++AQ+I Sbjct: 201 VLTNLHQESLLIKDIALKNLVIHLAIAIQQTRKNQRIPASTT--RTQRSPVLVRIAQKII 258 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + DE ++ + + HQ +++Q++ + H ++ R Sbjct: 259 HQVSDTFHVTLSEDETDYLVMHLLANQTWKEAA-QHQTTVEVQQAVAVFLQHIEKMSGHR 317 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 F D+ L L H+ LNR + + + N L E YP + L Sbjct: 318 FADDNILQQDLMLHMKPLLNRIQYGVSLQNPLLHEIKTSYPYPFDLAVSGLNAL-QLVRT 376 Query: 313 HLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 +++E+ VA+ A + +K+ I++ G+ +E +L+ L+I Sbjct: 377 P-NEDEAAYVALHIAASFERSQLDTSQKKKAIIVCGSGLGTARLLEIKLKTAFQHELDIV 435 Query: 371 HM-SVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + S + +L + +I T+PL P+I H +Q+ +++ Sbjct: 436 ELYSYQDYLMSTTLPCDVII---TTVPLASKGKPVIQVSAFFEQHDVQQVNEVIH 487 >UniRef50_C9AYJ5 Transcriptional antiterminator n=4 Tax=Enterococcus RepID=C9AYJ5_ENTCA Length = 679 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 72/425 (16%), Positives = 144/425 (33%), Gaps = 37/425 (8%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +RR I L F ++ F EL V + D+ RE L ++ L Sbjct: 79 FSEEERRSMIYLLTFSAVKDLSVYQFQELFYVSKNTILKDVKGI-REELAAFKIQLLYSR 137 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + +EG R FR + ++ L + Y+ + Sbjct: 138 KYGFYLEGEEYQIRAL-------AFRKVSTLSNTKNGNLL--------LFEGIYEQD--K 180 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + RL L + + F + + + E + Q Sbjct: 181 TIYVQIRDRLSATLTDF---NLVIVPSRFEEMLYFLNYLSFRMAETAVSLAETEIPLLQS 237 Query: 191 I-GRHWQRRALQPVPP-----DEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 + ++ L P E L++ +L + + + D L + ++++ Sbjct: 238 LHVHQVSQQFLAEFPDIKDRKTEELYVTILLKTI-LQGDIEDTSLE--FLLECASKIIHE 294 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 L + F D + L + HL A R + ++N L EE Y L TR AL Sbjct: 295 MERLAAIEFVDYRTLLMNTFYHLVPAYFRIRYGFPLENVLIEEIKLQYNELFELTRRALG 354 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLH---EKQIILLTGNDSEREAQIEQQLRE 361 E G + DEE G ++FG + ++ + +++ + +E +L+E Sbjct: 355 SLEDLVG-TIPDEEIGYFTILFGGEISKQKAKRDYFQLNALVVCPSGISSSLILESELKE 413 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 L + S++ + LI + + P + +T +++++ K Sbjct: 414 LFPQIHFLPARSIEEYENVRFNEEIDLIFSSAPIKT---KRPCYVINPIMTPIEKDELVK 470 Query: 422 MLESA 426 +++A Sbjct: 471 NVQAA 475 >UniRef50_D1ARV2 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARV2_SEBTE Length = 705 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 63/428 (14%), Positives = 154/428 (35%), Gaps = 19/428 (4%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 + S +R+ +L+ + T T+ + + GV DI E + IL + L L Sbjct: 83 EDYIFSKDERQRLVLIFILLKTGTFTIQSVLDEIGVSLSTLKNDIREL-KLILGKNGLKL 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKR---------- 116 +V+G+ + R + + L K LK+ Sbjct: 142 VQIAKKGLKVQGSEDSIRRMILNILLESGLESFGTDQRDKIDVFKRNLKQIFLNSYSGTK 201 Query: 117 -RGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQ 175 N + ++ + + + ++F +++ YL+ +L+ + + Sbjct: 202 AEKEESNLQTERAIREYLEEINEDMNEKFSDVLHNYIMNYLRLMILRIRNKKYLKEDLDD 261 Query: 176 RRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLR 235 + E+ E ++ + + +A + P E + + + + D + +Q++ Sbjct: 262 VLFLENIKEHKIIKSHINILENKADIKLTPQEI----IKIVEIYIENKNYDVNNSWKQVK 317 Query: 236 QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 Q ++ L++ N+ ++ L + L H+ A R I + N++ +E P L Sbjct: 318 QILENLISKVSSDINLDMTNDLILLNDLIYHMKLAAYRIKNNIKLKNSIYKEVEDEVPFL 377 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQI 355 +AG+E L+ +E + + F + + +L +K+I+++ G + Sbjct: 378 FGIVEKRIAGYEQYLDEKLNKDEIAFITIHFKMSIDRNYNLGKKRILIVCGLGYGTSKLL 437 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 ++ + E + I + + + II L P + + Sbjct: 438 KKIISE--EFNVEITDL-IPVYQLEKYNLDKTDIILSTVKIKELPDKPYLTINTIPNLQD 494 Query: 416 QEQIRKML 423 ++ I ++ Sbjct: 495 KKNIEQLG 502 >UniRef50_Q5E1U1 PTS system, mannitol (Cryptic)-specific IIA component n=2 Tax=Vibrio fischeri RepID=Q5E1U1_VIBF1 Length = 640 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 71/420 (16%), Positives = 144/420 (34%), Gaps = 29/420 (6%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S +A R +++ L + + V D+ E RE L + L L + Sbjct: 86 SPRNAKDRMVYLMMRLLSQEEECKLDDLANQWFVSRTSLQADMGEI-REQLEQYNLELIS 144 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFIT--SQFTPALKSELKRRGIARNFYDD 126 R+ G R C+ H L + +FI F P + + + + Sbjct: 145 KAHCGLRLFGEEQAIRACIAHILFQFKPSDHTFIDVCEYFFPEINQPSLKTDLLELINKN 204 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + +H L +Y L + + + + + + Sbjct: 205 H--------------IKLTDEGLHHLVVYCGVALHRLKQNACI--HHVDQPNLSEEAQ-K 247 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 A E+ + + P+P E ++++ + RV Q+ + + + L+++ Sbjct: 248 TAAELSQTIESLLGAPLPQAEIDYLSIQIAARRVTGVPEIDTQKPTEQLELTQYLLDYVN 307 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 N +++ L L H+ + R + I I N L + R YP T AA++ + Sbjct: 308 THYNYDLRNDEQLKRDLLCHITTMILRVKYQITIPNPLFDHIKRYYPLAYDMTVAAISHW 367 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK---QIILLTGNDSEREAQIEQQLRELT 363 + D E G + + G L + L E+ + +L+ + + +E QL Sbjct: 368 GKHL---IPDGEIGYLVMHIGVGLERNFSLEEQLPPKALLVCDSGTSIVRLLESQLIRSL 424 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K S++ + + T + + P I T+ Q EQ+ K++ Sbjct: 425 PQLTIEKVESLRDYEELSK---VDADFVISTEKVSQKNKPTITVSPIPTSFQLEQVNKLI 481 >UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Clostridium difficile RepID=C9XLJ8_CLODC Length = 679 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 68/421 (16%), Positives = 161/421 (38%), Gaps = 27/421 (6%) Query: 11 LSAPQRRCQILL-TLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 L++ + R + +L L + T+ + ++ V D + +L + L L Sbjct: 115 LNSKEDRVEFILNYLIELDGFITLDSLADEMCVGRTTLVNDFQYVEK-VLASYNLNLIKK 173 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + ++ G L+ RL + + L + R F S++ +K E + NL Sbjct: 174 QNTGMKLNGNELDIRLFILNQLYKNSRKD--FSNSKYFKGIKKE-----------EIINL 220 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + + + + + Y+ + + + ++ +S E+ +A+ Sbjct: 221 EEKLLTLFKENNFYVTDEMLREVINYIVVLVYRVKEEKKVKDYDVKFDLLKSYDEYFIAR 280 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDP--LRDAHQRDRQLRQSIKRLVNHFRE 247 EI + +E +++ + P ++ + + + + ++ + N Sbjct: 281 EIKHIISGMFECTLNDEEIIYLTIPLVSGNAPASECALNSSRISKNIDELMENIFNQIYV 340 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 + F +E L L HL+ LNR LF I + N L EE + Y + + A E Sbjct: 341 DMGI-FINEDELRVGLGYHLSFTLNRLLFNIKLKNVLLEEIKQNYILPFKLAQIAGKVIE 399 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQEN----DLHEKQIILLTGNDSEREAQIEQQLRELT 363 +Y + +S++E G +A+ F +L + + + + II TG + + +I + Sbjct: 400 KKYNLEVSEDEIGYIAIHFSGYLERNSSRFYSIKKIAIICSTGLGTAKLLKIRVE----K 455 Query: 364 LLPLNIKHMSVKAF-LQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 L+ N K ++ +F L+ ++ + + ++ + ++ + K Sbjct: 456 LIGNNPKIDTLSSFNLRNINLDEYDIVFTTIDLDTSNINTIVLKINTIFDENKLREQLKT 515 Query: 423 L 423 + Sbjct: 516 V 516 >UniRef50_C6CCS2 PTS modulated transcriptional regulator, MtlR family n=79 Tax=Enterobacteriaceae RepID=C6CCS2_DICDC Length = 641 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 69/422 (16%), Positives = 150/422 (35%), Gaps = 30/422 (7%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++ +R +L+ + +E V D++E RE+L + L++ T Sbjct: 88 PRTSTERVQSLLVRFLTSAFAFKLEDVAERWFVSRPTLQSDMAEV-REVLGRYHLSIETR 146 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 ++ G+ ++ R CL + + + P L S R + L Sbjct: 147 PRYGMKLLGSEVSIRTCLTDLVYQMVQD-----DGGEAPTLPSTALDRE------TLSRL 195 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 Q +++ R R +L LY + + G P + + E A Sbjct: 196 QVILHDVFSRSGIRMTDEAECYLGLYCAVAIRRIGEG-YPLSDFTAEDVDDDVRE--AAH 252 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD---PLRDAHQRDRQLRQSIKRLVNHFR 246 ++ + + + E ++ + + R+ + D + + ++++ Sbjct: 253 QLISVMRAMTGKAISASEEAYLRVNLAARRIQELSGNASAISPDDGE--SLVDYILSYIN 310 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 N ++ L L TH+ + R + I I N L + YP T AA++ + Sbjct: 311 THYNFNLQNDPQLRADLLTHIKTMITRVRYQITIPNPLLTNIKQHYPMAYDVTLAAVSSW 370 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ---IILLTGNDSEREAQIEQQL--RE 361 +S+ E G + + G L + D+ ++ ++L+ + I+ L R Sbjct: 371 SKYTPYVISENEVGFLVLHIGVGLERHYDVGYQRHPQVLLVCDTGNSTIRMIQAMLWRRY 430 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 ++ NI +S++ + T L P++ T +Q EQ+ K Sbjct: 431 PQMVVNNI--ISLRDY---RTLPEVEEDFVISTTRLAEKGKPVLVMSPFPTDYQLEQLGK 485 Query: 422 ML 423 ++ Sbjct: 486 LV 487 >UniRef50_C2JT05 Transcriptional antiterminator n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JT05_LACRH Length = 696 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 67/425 (15%), Positives = 137/425 (32%), Gaps = 36/425 (8%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 +R ILL L ++ + GV A D+ T + + H Sbjct: 82 DVFQFDHFHEEEERTYLILLYLLTTSDNVSLDHVVDYLGVSKSTAEKDVRRTRLFLEQKH 141 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGI--A 120 +L L Y ++G+ + QRL L + L+ + + Sbjct: 142 KLLLKYTRANGYFIQGSEVKQRLIL----------------NDIILGLQQYSDSQDVIAR 185 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 + + + L L + ++ +G ++ + + Sbjct: 186 TTCIGIEEIVHYAREVEEHIDVTYSDDAFITLVNTLAVNVTRNLSGRVKDYDYFENK-LS 244 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 LEF Q I + E ++ L+F + Q L +I++ Sbjct: 245 DTLEFASVQTITN---SEWVGSESDLE--WITLVFLSSNTLKGVFQDVQSSILL--AIEK 297 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARL---YPRLVR 297 +V+ F + V+ + + QL HL A R + + + N ++ + + L Sbjct: 298 MVDRFEQDTLVKIPNRKAFDKQLLAHLRPAYFRVKYGMHLTNIGVDKVFKEDTWHKMLFE 357 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWL--MQENDLHEKQIILLTGNDSEREAQI 355 T +A L E G EE L+ FG L +++D ++++ ++ N + Sbjct: 358 TVKADLEPLEKLVGKSFPIEEIKLITFYFGGVLESRRQSDNNQQRAAVVCTNGIIAARLM 417 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 + L L + +SV F + L+ + + +TT + Sbjct: 418 FEHLVRLFPEIAFLSAISVHDFE--TFDKDYDLVFSTVPLNTNARQ---YIIHPLMTTEE 472 Query: 416 QEQIR 420 +R Sbjct: 473 SINLR 477 >UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9P7_9ACTN Length = 648 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 68/422 (16%), Positives = 136/422 (32%), Gaps = 22/422 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 +A R +L L + T + + V S D+ + E L L + Sbjct: 85 PQTAEARVSYLLNDLLSRSDYIAIDTLASVLYVSRTSISNDLKQVE-ERLAQFGLAIDRR 143 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 +V G+ + +RLCL + S R +D + Sbjct: 144 SHHGIKVIGSEMAKRLCLA---------SLAMEGSDELKGAARLSVDAEAYRALFDVVSD 194 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 R S L ++ LL+ G Q F +A+ Sbjct: 195 CVDDVTTEERFAI--NSVAYRNLITHIVIALLRIREGCYVPMEGEQLTEIRKSPSFPIAR 252 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLR------QSIKRLVN 243 I R +P +E ++A+ + R+ ++ L ++ +++ Sbjct: 253 RISDSIGARTGVVLPDEEVAYIAIHLTGKRLLGDFDAGDDQEAGLVISDEVWDAVTGMLD 312 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 + L L HL R + +DN + + +P A Sbjct: 313 AVWRTFRFDLRHDLELRMNLARHLVPLEVRLHHHLHLDNPILGDIKSRFPLAYSMAVEAG 372 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQLREL 362 + + Y LS+EE G +A+ F L ++ D +K+I+++ + + +E + R+ Sbjct: 373 SSLAAHYEAELSEEEIGYIALSFALALERQKTDAPKKRILVVCASGAGSARLLEHRYRQ- 431 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSP-PLIYTDLTLTTHQQEQIRK 421 ++H+ + + T+PL P P+ L + +R+ Sbjct: 432 -EFGSYVEHIETCDAAHVRFVDFSRIDYVFTTVPLAEEVPVPVRQVGYFLDAAEVSDVRE 490 Query: 422 ML 423 +L Sbjct: 491 IL 492 >UniRef50_B0NYU6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYU6_9CLOT Length = 640 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 60/417 (14%), Positives = 134/417 (32%), Gaps = 38/417 (9%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S+ R + L SE V D++ + I + + L + + Sbjct: 90 SSHTRMAYMFWQLMHAEEPYLTDDLSEEMKVARTTTISDLNRLRKAIEK-YDLKIKGKAN 148 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + G RL + + Y + L Sbjct: 149 TGLALCGDEYKIRLFILENIYEQL----------------------------YLNFPLGQ 180 Query: 132 LVNLCSRRLQKRFESRDIHFLCLY--LQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 ++ Q+R + F Y + + +G T + + + + Sbjct: 181 IIREKLYDFQERLSMDALGFGFFYRFFVVMIQRMESGHTIKKLEPKYEELYGSSAYMIVD 240 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR---DRQLRQSIKRLVNHFR 246 E ++ + +E LF+++ + +R P + Q+ + I +++ + Sbjct: 241 EFLNEIEQVKGYKISKEERLFLSISVAGMRTPANTAEIEQKISISEGVADLIIEILDRIK 300 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 NV + L D H+ +NR + I N + ++F Y + A Sbjct: 301 AELNVTVVANE-LFDDFVYHVFFMINRLKYGFHIYNPMVDDFKNKYSVAYKMAEIAKGVL 359 Query: 307 ESEYGVHLSDEESGLVAVIFGAW-LMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 E G+ ++++E G +A FG + L QE + +I ++ G+ IE QL+++ + Sbjct: 360 EERVGIEMTEDEMGFLAAYFGVFLLEQEPEEKRCKIAIVCGSGKIIGRLIENQLKKVFDV 419 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + I+ + + +P + ++ + Q + M Sbjct: 420 EPEFEFF--YGIFDENRKDDFDYIVTTTELHMDTKTPVIFMDEVFDREYIQRKFENM 474 >UniRef50_C3RLU7 Predicted protein n=2 Tax=Bacteria RepID=C3RLU7_9MOLU Length = 640 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 71/423 (16%), Positives = 151/423 (35%), Gaps = 27/423 (6%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S+ S +R I L + E + + S +I + + + L L Sbjct: 85 SIYSVTEREEWIQKYLIENNGWVKAEALCEKLFISQSVLSQNIKSVRKAFQK-YDLILLQ 143 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 RVEG N+RLCL F +QF + + Sbjct: 144 KPHYGMRVEGREFNKRLCLAQIYITHIDQREGFPGTQFNNDELQLILK------------ 191 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGIT----PQFNPLQRRWAESCLE 184 ++ +V+ R Q + + + L + GI + RW +S Sbjct: 192 IEDIVDRILTRYQISMSEVSVQNFIIDIYISLKRIKKGIFLKSTDKMVIDIARWTDSI-- 249 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV---PDPLRDAHQRDRQLRQSIKRL 241 VA E+ + + E + +++ + R+ D D + + + + Sbjct: 250 --VAVELAKLINDELTIEMKDQEIVSLSIHLAAKRIICHFDESIHRIIEDFDVNKLVNNM 307 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 +N+ + ++ L QL HL RS + + + N L ++ + + Sbjct: 308 INNINCKWGIDLTQDEELKSQLVLHLIPLEVRSRYNVVLHNPLIDKIKQQNIFAYQMAVT 367 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRE 361 A F +G LS++E G +A+ L++ ++K I++++G + Q++E Sbjct: 368 ACDQFSDYHGNRLSEDEMGYIALHMNLALLRTQIKNKKNILVVSGLGRGTAHTLAYQIKE 427 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPL-FSPPLIYTDLTLTTHQQEQIR 420 + I + +++ + + ++PL FS P I + + + +++I Sbjct: 428 --MYGKYINEVKTADYIELNNYDFTNINLLISSIPLRRDFSVPSIEVNYFFSDNDKKRIE 485 Query: 421 KML 423 +L Sbjct: 486 TIL 488 >UniRef50_A5Z559 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z559_9FIRM Length = 398 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 6/183 (3%) Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 K LV F ++ V+F D+ L LY HL ++ R + I + N + E+ R Y L Sbjct: 17 KALVAEFEKVACVKFEDKDDLEKALYYHLNTSMYRFQYGIQVGNPMLEDVVREYSELFDL 76 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQ 357 T+ E + G+ + + E + + FGA L +E + +EK +++++ N I+ Sbjct: 77 TKIVCHYLEQQIGLPVPEGEVAYLTLHFGAHLKKEEEQNEKIRVLIVCTNGISSGNMIKH 136 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 +L L +LP V ++I+ + + P+I LT ++ Sbjct: 137 EL--LKMLPQVDIVGVVSNKEAINVHNICDVVISTHKINCL---VPVIVVHPILTDFDKK 191 Query: 418 QIR 420 I Sbjct: 192 LIL 194 >UniRef50_C3WAH3 PRD domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAH3_FUSMR Length = 691 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 68/416 (16%), Positives = 157/416 (37%), Gaps = 11/416 (2%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S L +RR + L + + SE+ V DI + RE L + L L Sbjct: 88 SNLDIYERR-EYLSFICIFDEKINLTKASEILDVSRTTIRNDIRDI-REELLNNNLELKI 145 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 + G ++ R +LR+ F ++ K + I + D Sbjct: 146 SQQEGLILSGEEIDIRKQQLKFLRKYSNFI--FYSNVGLKTRKELIVEEYI--KYVDINI 201 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 ++ +N + L K + + +YL +++ G + +++ + E+ Sbjct: 202 IKNFINYIQKLLNKIISDEAYNIIAIYLIITIIRIKQGKVLE-KIANKQFLKETAEYDTI 260 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 + + + +E L + F + + + ++ +K+ +++F + Sbjct: 261 LKAKGILESSYDIFLEENEILQITDYFLGSHTYNFEKSYYSNWVEIDILVKKFIDNFNKK 320 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 +V ++ L + L H+ + R I ++N++ E YP + T+ +L E Sbjct: 321 IDVDISKDKLLLEGLLNHIKPTIYRLQNKIKLENSIFVEVLNSYPNIFYNTKNSLKDIEK 380 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHE--KQIILLTGNDSEREAQIEQQLRELTLLP 366 G+ S++E +A+ F + + + + K+++++ G + + QQL+E+ + Sbjct: 381 YLGIEFSNDEVAFLAIYFKSAIDRNKYKRKNLKRVLVVCGYGYGTSSLLVQQLKEIYTIN 440 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + +K + +T LII+ + S P++ L + K Sbjct: 441 I-VKTIPRHLLEKTLQKEEVDLIISTVDIDSSF-SIPVVKVKSILAQEDINNLDKY 494 >UniRef50_B6EP62 HTH-type transcriptional regulator n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EP62_ALISL Length = 656 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 73/420 (17%), Positives = 142/420 (33%), Gaps = 29/420 (6%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S +A R +++ L + + V D++E REIL + L + + Sbjct: 102 SPRNAKDRVVYLIMRLLSQEEECKLDDLANQWFVSRTSLQADMTEI-REILEQYNLEIVS 160 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFIT--SQFTPALKSELKRRGIARNFYDD 126 ++ G R C+ H L + +FI F P + + + + Sbjct: 161 KAHHGLKLFGEEQAIRACIAHVLFQFKPSDRTFINVCDHFFPEINLPSLKEDLLTLINQN 220 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 R +H L +Y L + + S Sbjct: 221 H--------------IRLTDEGLHHLLVYCGITLHRVKLNSVIHHVHQPK---ISNEAQN 263 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 A ++ + + P+P E ++++ + RV ++ + + L+++ Sbjct: 264 AALDLSKTIEVLLSAPLPQSEIDYLSIQIAARRVTGVTIVDTEKHTEQLELTHFLLDYVN 323 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 E N +++ L L H+ + R + I I N L + R YP T AA++ + Sbjct: 324 EHYNYDLRNDELLKRDLLCHITTMILRVKYQITIPNPLVDHIKRYYPLAYDMTVAAISHW 383 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ---IILLTGNDSEREAQIEQQLRELT 363 + D E G + + G L + L E+Q +L+ + + +E QL Sbjct: 384 GKHL---IPDGEVGYLVMHIGVGLERNFALEEQQPPKALLVCDSGTSIMRLLESQLLRSL 440 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K SV+ + T + + P I T+ Q EQ+ K++ Sbjct: 441 PQLDIQKIDSVREYESLTK---VDADFVISTEKVSQKNRPTITISPLPTSFQLEQVNKLI 497 >UniRef50_C6JIT2 Predicted protein n=2 Tax=Fusobacterium RepID=C6JIT2_FUSVA Length = 676 Score = 160 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 56/409 (13%), Positives = 138/409 (33%), Gaps = 16/409 (3%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 +P+ R +L SE + + + + +L + L L + Sbjct: 84 SPKEREIYILLKICFEREINQNVISEELDTSRSTIKVHLRDIKK-VLDEYNLELELLHKK 142 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 V G R C + + SF+ + L+ + ++ Sbjct: 143 GLGVSGEEEKIRQCTLKIMSMVKKSNSSFLKNILDDYLEE-----------IEIEGVKLF 191 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 +N C + + K + YL + + G + + ++ EF+ ++ Sbjct: 192 INYCQKLMNKIVSDEAFDIISKYLILAIYFNKKGYKIT-SIKNYNFLKNTSEFECVEKSR 250 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + + +E L + F + ++ ++ +K +N E +V Sbjct: 251 ALLEGFYEIELSEEEYLKITDYFLGSHTYNISYSYYENWVEIEMIVKNFINRINEKLDVD 310 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 ++ L L H+ + R I ++NT+ EE YP L + ++ E Sbjct: 311 ISADETLMTGLVNHIKPTIYRLKNGIELENTIYEEVVESYPNLFSMIKGSVGELEDFIDN 370 Query: 313 HLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 +++E + + F A + + + + +++++ G+ + QQL+++ + + I Sbjct: 371 KFTNDEIAFITIHFKAAIDRNIKKKREKVKVLVVCGSGYGSSKLLAQQLKDMYRVEI-ID 429 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 + + LI+ + +I + LT ++ Sbjct: 430 TIPRYLLEKVNKRTDIDLILTTIPLDDFDTDKTIIKVNPILTKEDMAKL 478 >UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U731_9LACT Length = 641 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 68/399 (17%), Positives = 148/399 (37%), Gaps = 27/399 (6%) Query: 32 TMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWL 91 T+ ++ V D++ + +YH + L + +++G N R + +L Sbjct: 115 TLEKLADELFVSLTTLKKDMNSVKDTLQKYH-IQLAKISNKGLKLQGEEKNIRQLIVDYL 173 Query: 92 RRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHF 151 R + + D +++ +V R+ Q Sbjct: 174 ---------------VLEQSELKLDRIFSISSTDKVSVEEIVIRNIRKYQIPITDIGFRN 218 Query: 152 LCLYLQYCLLQHH-AGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLF 210 L ++++ + + + P E E+ A+ I + + + +P +E Sbjct: 219 LIIHVEIAISRLRFQNNSIDQKPNTIE--EHSDEYYCAKAIAKEIEAKINLTIPENEIAN 276 Query: 211 MALLFSMLRVPDPLRDAHQRDRQLRQS--IKRLVNHFRELGNVRFYDEQGLCDQLYTHLA 268 + L + D + + +S I+R++ E+ + F + L + L HL Sbjct: 277 IYLHLLGQKRMLVSEDTLESRLETPESELIERVIVEINEMYQLDFRQDVILKNGLLLHLE 336 Query: 269 QALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGA 328 AL+R + I+N L EE YP ++ + + E+ + + + E G + + F Sbjct: 337 SALHRIRLNMPINNELIEEIKNNYPFPMQLAKILASSLETNFNIKIDINEVGFLTLHFCG 396 Query: 329 WLMQENDLH---EKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRG 385 L + N + E + +++ ++ +L+ T LNIK + V A Q Sbjct: 397 ALERANSIQSNKEIRAVVVCTTGLGTSVLLKAKLQSKT--NLNIKVVGVYALYQLDDIEF 454 Query: 386 AALIIAPYTMPLPLF-SPPLIYTDLTLTTHQQEQIRKML 423 + I T+PL S P + ++ + E+I + + Sbjct: 455 TDIDIIISTVPLSKKYSIPDVVITPIVSNNDIEKIHEFI 493 >UniRef50_A6LQT2 Transcriptional antiterminator, BglG n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQT2_CLOB8 Length = 674 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 59/431 (13%), Positives = 145/431 (33%), Gaps = 25/431 (5%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + L S + +R +I+L L + + +S L V + + D+ ++ Sbjct: 79 LNNLEYSSPKNKEERHNRIILELLKQEEPQKIYYYSSLLKVSEATINNDLDPVEEWFMKS 138 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 + +TL +E + R ++ + + +++ Sbjct: 139 N-VTLIRKSGLGIYLEYEEEDYRKVCMRYIYQKTEDPLNRLSN----------LVEANIV 187 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 N D+ + N S + + L YL + G +S Sbjct: 188 NKVIDSIKKVRDNRLSEVAESSYTE-----LIAYLSITTKRIIEGRKNTKEKNINLTLQS 242 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH--QRDRQLRQSIK 239 +++ E+ + L E + + + ++ + + +R + Sbjct: 243 IKDYEFVIELVTLLSEQFLIEYTTTEIIDLYIYIKGAKLQHINENEDIFDTESDIRYVVY 302 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 ++ + + + L H+ + R I I N E RLYP++ Sbjct: 303 DMIQEYDSTLAYQIKQDTEFIRGLIAHIRPTIIRLQHGIEIQNPFQNEIKRLYPQIYEKA 362 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ----IILLTGNDSEREAQI 355 A+ ES+Y + + +E GL+A+ FG ++ + ++ + ++ + A + Sbjct: 363 ERAVKVIESKYNLKVPAQELGLLAIHFGGAEIRLQNNYKFSRKIDVGVICSSGIGISALL 422 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 ++ + + +K +S L + ++++ + + F+ I + LT Sbjct: 423 SSEISKFFKDEVRVKTLSFND-LSSDKIHDFEVLVSTFDLNDSQFN--YIKVNPMLTEED 479 Query: 416 QEQIRKMLESA 426 I +E A Sbjct: 480 VLLISNEIEKA 490 >UniRef50_Q1JEW2 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=13 Tax=Streptococcus RepID=Q1JEW2_STRPD Length = 720 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 75/428 (17%), Positives = 148/428 (34%), Gaps = 34/428 (7%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 M+PTL L +R I++ + ++ L + + D++ R+ ++ Sbjct: 109 MLPTL--DDYLFQDERLDMIIIYIMMAKEFISINHLESLLRLSRNSVIADLN-LVRDRVQ 165 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 Q+TL Y EG L R L + ++ P + S L Sbjct: 166 AFQVTLAYNRQDGYFFEGESLALRRLLESAVSSLLQVTS-------GPWVFSYLLH---E 215 Query: 121 RNFYDDTNLQA-LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW- 178 D T + A + SR F S + L + + P R Sbjct: 216 LGLPDQTKVMAATLEELSRENHLTFISEKLRDLIYFFCLLAHR----------PFSRDVR 265 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVP-PDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS 237 E+ F +A + L P E ++ + + L + + Sbjct: 266 VEAVDTFPLASPAVETMVDQLLVNFPSLTEEKYLVQSRLLGCIQGDL--DLVFQQPIYDI 323 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 ++ ++N + D L LY+HL A R + I + N L E+ + Y L Sbjct: 324 MEEIINSVAVNTGLSITDTPELRQNLYSHLLPAYYRLYYDIDLTNPLKEQIKQDYESLFY 383 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLM--QENDLHEKQIILLTGNDSEREAQI 355 + +L+ E + G ++++E + FG WL ++ ++ + + N + Sbjct: 384 LVKRSLSPLEKQLGKLVNEDEVAYFTIHFGRWLQAPKKRPSNQLVALSVCPNGISSSLML 443 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 E L+EL I+ + ++ P LI + + P+ T + + Sbjct: 444 EATLKELFPQLQFIRIHQL-DKIKLLDPASFDLIFSTVAFDC---AKPVYVTQALMGPVE 499 Query: 416 QEQIRKML 423 + ++KM+ Sbjct: 500 KMMLKKMV 507 >UniRef50_C2C385 BglG family transcriptional antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C385_LISGR Length = 678 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 66/422 (15%), Positives = 142/422 (33%), Gaps = 25/422 (5%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 + +R I L F ++ + V + DI RE L +++ L Sbjct: 72 EAAYFDEKERIMLIYLLTFSRYKELSVFHYQSFLNVSKNTILSDIKNLRRE-LAAYEVKL 130 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSE-LKRRGIARNFYD 125 G + + G R FHW+ + T Q + + + R R + Sbjct: 131 EYGRKEGFFLSGDEWTIRRLGFHWINKLVETTA--GTWQLSKWIHAHDFNRYTTIRTQIE 188 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 +N+ RL+ + ++CL ++ + + S Sbjct: 189 TAMDNKAINMIPGRLEGFYG-----YMCLIIERMAESPLSIEQEHYLGR----VMSTHIH 239 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 Q+A+++ + + E F+ +L L + L +++ Sbjct: 240 QIAEDLLA--STGLAESICQKEAAFITILLLTL---TQGQIEEPAFDFLLHCASQMIQEL 294 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 ++F D + L ++ HL A R + + I+ R YP + T AAL+ Sbjct: 295 ERRSAIQFEDYRKLLLDVFNHLVPAYFRIYYDLEIEQPFLTTIERDYPEISAITEAALSP 354 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLM---QENDLHEKQIILLTGNDSEREAQIEQQLREL 362 E G +S E ++FGA + ++ + +++ N +E +L+ L Sbjct: 355 LEKLVGKPISKGEKAYFTLLFGAAIKNQQEKEKTEQLHALIVCPNGISTSMIMEAELKRL 414 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + H ++ ++ + LI + + PL + ++ + K Sbjct: 415 FPTIIFHTHYALSE-MERVSLDSYDLIFSSVAFD---SAKPLFLIRPIMEQTEKNHLVKK 470 Query: 423 LE 424 ++ Sbjct: 471 VQ 472 >UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQV6_ALIAD Length = 674 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 82/432 (18%), Positives = 144/432 (33%), Gaps = 27/432 (6%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 P A + ++ QR + L L +A ++ S D+++ LR Sbjct: 82 PVTARSAAVTPRQRAALLALWLLAEPGPLKLAYLGKVLDAAPASLSGDLNDLAP-WLRAR 140 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 LTL VEG+ + +R + + ++ P + T Sbjct: 141 HLTLVRRQGFGVLVEGSEVARREAMADIVYE--QISPYQLARMTTREGDLSHPVARWLVQ 198 Query: 123 FYDDTNLQALVNLCSRRLQKR---FESRDIHFLCLY-----LQYCLLQHHAGITPQFNPL 174 F D L+A+ ++ L E D + LY L+ G Sbjct: 199 FVQDPVLRAVADVVEAVLGAAEPPVEEADRFEVWLYAVIQCLRAARRGLVRGTDLDEGAR 258 Query: 175 QRRWAESCLEFQVAQEIGRHWQRRALQPVP--PDEPLFMALLFSMLRVP-DPLRDAHQRD 231 +A+E+ + P E +MA + LRV D + Sbjct: 259 PGDV-------ALAKELLSSVAKATGLPALSTEPEIRYMARHLAGLRVRLDDDFRLLPSN 311 Query: 232 RQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARL 291 R V ++ + F + L L HLA AL+R + I N L E Sbjct: 312 VTALDLAHRFVRAVEDITRLPFASDHLLVSGLAQHLAPALDRVRAGLPIRNPLLETVKAR 371 Query: 292 YPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSER 351 YP L +A + +G+ L DEE G +A+ GA + + + +++ + Sbjct: 372 YPELFAAAESASREVFAPHGLRLPDEEIGFLAMHLGASRERRLAEEKWRAVIVCPHGLSS 431 Query: 352 EAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTL 411 + ++R LP +SV+ + + T+ LP P++ L Sbjct: 432 ARLLASRVR--KELPE----ISVQEVASAKSAAHLNADLVLSTVSLPEADVPVVVVSPFL 485 Query: 412 TTHQQEQIRKML 423 T +R +L Sbjct: 486 TEEDLRAVRFVL 497 >UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Listeria RepID=Q723N6_LISMF Length = 653 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 56/427 (13%), Positives = 146/427 (34%), Gaps = 15/427 (3%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + P + +R I L + T+ ++ + ++ E + + + Sbjct: 83 LDNQVSPIPSTKEERVIYIFSKLLKADDYITIHQLADELYISRSTIEKNMVEVTKMLEKE 142 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 +TL ++ + +R L F ++ + L++ + Sbjct: 143 -GITLYKKPSKGMKLLISEREKR-ALTSKFINNFWGNNWYLKQEGEKVLQAFDTIKADVT 200 Query: 122 NFYDDTNLQALVNLCSRRLQK---RFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + + L+ ++ + ++ F + ++L + + AG + Sbjct: 201 GIFPEEGLKEIIAIVQAFSERHDFAFTDYAFQSIVIHLAIAVERIRAGEYIENVESDPMK 260 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 + + + + R +P E ++ L + H + Sbjct: 261 DVFDSQRNNTEILVSMLEDRLDIKIPAFEVGYIQLHLTAAYNQ-----QHDELLVSVRPK 315 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 + V F ++ L D L TH+ A+NR + N + + +P+ Sbjct: 316 EDDVAEFVSTCLAEGNYDKSLLDDLTTHMKSAINRLKLGMHFKNPYLSKIKQNFPQAFEE 375 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL-HEKQIILLTGNDSEREAQIEQ 357 A FE +Y V ++++E+ +A+ F A+ + + +++L+ + Sbjct: 376 ALYFKAKFEQKYDVQVNEDETAYIALHFEAYKERSRSFPDQIRVVLVCSTGLGSSRLLAA 435 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 ++++ + K +SV+A ++T + + T+ L L P I ++ + Sbjct: 436 RIKKYFPMITIEKILSVQALMET----EVDVDLVISTIYLELEDIPSIVVSPMMSKADLQ 491 Query: 418 QIRKMLE 424 Q+ +E Sbjct: 492 QVESQIE 498 >UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Anaerococcus RepID=C7REJ5_ANAPD Length = 625 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 48/407 (11%), Positives = 131/407 (32%), Gaps = 28/407 (6%) Query: 20 ILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGT 79 I+ +++ V + DI + + +L+ + + L + +++G Sbjct: 100 IMKLFLFSNSFIKQQELADMFYVSLSQINKDIKKVRK-LLKAYNIELISKPYYGMKIKGR 158 Query: 80 VLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRR 139 + RL + R P+ L + + + D + + Sbjct: 159 EKDIRLAI----RNEIGEDPAIFARDSDEELFTRI------QAIIADIDFPESFYMPYAN 208 Query: 140 LQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRA 199 + L +++ +L+ G + + S EF +A ++ + ++ Sbjct: 209 FK---------NLVVHIYISILRIKEGKYIDLSDELSKRVISYDEFNIANKVVKELSKKL 259 Query: 200 LQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGL 259 P DE L++ + +L +++++ ++ F L Sbjct: 260 DLTFPEDEILYLTMHLISKNAVTNYEKVSPEISEL---AQKMIDEIYKVSKYDFRSNIDL 316 Query: 260 CDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEES 319 L HL + R + + + N + + A Y + D+E Sbjct: 317 FFALALHLGPLIERLRYGLTMKNPILNDIKDN-QIAFMLATVATNPINETYKTRVCDDEI 375 Query: 320 GLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQ 379 G +A+ + + + N ++ I+++ G+ + ++ Q+ I +++ + Sbjct: 376 GYIALHIASAM-ENNTYLKRTILVVCGSGNSSAQIMKTQIER--KYKEQIDSLTLTDLSK 432 Query: 380 TGAPRGAALIIAPYTMPLPLF-SPPLIYTDLTLTTHQQEQIRKMLES 425 ++P+ P++Y D+ +I + Sbjct: 433 VDLYNLDKFDFIVSSVPIKQKTDTPIVYVDVIFKQKDFMKINDIFNV 479 >UniRef50_C6IZU2 PRD domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZU2_9BACL Length = 707 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 82/426 (19%), Positives = 143/426 (33%), Gaps = 23/426 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 PS S +R ++ L + + T + V S D+ E R+ L L Sbjct: 91 PSDYSVEERHLLLICRLLEEQEPCKLFTLAHGLKVTVATISSDLDEVEPWFSRF-GLELV 149 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFI---TSQFTPALKSELKRRGIARNFY 124 + G +R L +Q + A L+ G Sbjct: 150 RRRGYGVELLGEEQQKRAALCQLAAEHLDYSDLIGGSPENQVSSATARLLEVVGTDNLMT 209 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE---- 180 + L A+ + L L + L + + AG R+ Sbjct: 210 VENTLWAMNWSWTEHL----SENAYTQLLIRLSVSVNRIKAGRLVSCAGKNRKLPPVGGG 265 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 E + A + PP+E +M LFS + + + Q D +L ++ R Sbjct: 266 EQDEAETA-RFASRLAEKLELTFPPEEIAYMNGLFSRAK--EASPELVQADMELVDTVYR 322 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L + + + F +++ L L H+ A R I N L + Y L R Sbjct: 323 LTENVVKRTGIPFQEDRLLRSGLLEHMGPAFKRIREGSRIRNPLLGAIRKDYDELFGIVR 382 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQL 359 A+ ES G+ + DEE G + + FGA + + N L + IL+ + + +L Sbjct: 383 EAMN--ESVAGLEIPDEEIGFLVMHFGASMERLNQLGLSVRAILVCSSGLSSSKLLATRL 440 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPR-GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 +P +V + P LII+ +PLP + LT E+ Sbjct: 441 A--KEMPQIEVLGNVSWYEAKRLPESDYDLIISTIDLPLPEDR--YVKLSPLLTDEDTER 496 Query: 419 IRKMLE 424 + + ++ Sbjct: 497 LLEYVQ 502 >UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETM8_9FIRM Length = 711 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 66/422 (15%), Positives = 150/422 (35%), Gaps = 11/422 (2%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 T + + P+R + L F+E + + + D+++ + + Sbjct: 85 DTNSSAPADNRPERLTLLCHDLLLAEEPIKSYYFTEKFEISEGTLTADLNQLETWFTK-Y 143 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 QL L +EGT + +R L ++ + S Q L I Sbjct: 144 QLKLVRRPGLGVFIEGTEIARRQALTSFICKQVNEHHSIGNLQDKKFLSDRNFINEIDGE 203 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + ++ C ++L + L +Y C+ + G + Sbjct: 204 VM--AEVNHILGGCQKQLGMQLSDNGYLHLLVYTSLCVQRMQKGRFIKELKQSYAEISIQ 261 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQ-RDRQLRQSIKR 240 E+ V++ I + ++ + DE ++MA+ S R+ P RD ++ + Q Sbjct: 262 PEYAVSEYIMKELRQFFHLSISVDETIYMAVFISGQRIWPSGSRDLTDIKNLDVHQITLS 321 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 ++ E+ ++ F + L +L H+ + R I ++N L +EF YP + + Sbjct: 322 IIKKVNEILHINFMRDSRLLTELSGHIQPTIARLRAGIPVENPLLKEFQESYPSVYKACE 381 Query: 301 AALAGFESEYGV-HLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQ 358 L+ G+ + E G + + F + + E ++ + ++++ + + Sbjct: 382 EGLSLLCPILGIKKVPASEIGFITLYFTMAMERIEKEIKKLSVMIVCPTGIGSSRLLTES 441 Query: 359 LRELTLLPLNIKHMSVKAFLQ-TGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 L++ S G L+I+ + + + P I+ + LT + Sbjct: 442 LKKEYPDLDIRGITSAFELDNIRLQEEGVDLVISTVKLEI---AYPYIHVNPILTRQDKI 498 Query: 418 QI 419 + Sbjct: 499 LL 500 >UniRef50_Q8NVE5 MW2083 protein n=56 Tax=Staphylococcus RepID=Q8NVE5_STAAW Length = 710 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 138/415 (33%), Gaps = 9/415 (2%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +++ I+ L Q + ++ GV + + + ++ + +QL+L+ Sbjct: 88 LSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNK-YQLSLSRKR 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + GT +R L + + + S + + N++ Sbjct: 147 GEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVE 206 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 L+ L + L +++ + + G N ++ E +VA E Sbjct: 207 RLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASE 266 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + + E F+ + + L D +R IK VN + Sbjct: 267 LADKLGQIYDVTFNQAEIAFITIHLRGAK-RKNLNDTSLNNRCEENKIKAFVNKVEMISG 325 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F D L D L HL A+NR I N L + YPRL R AL Sbjct: 326 MTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDC--WP 383 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 + + E + + FG + + + I+++ + + +L ++ I Sbjct: 384 DLIFPESEIAFIVLHFGGSIKNQGNRF-LNILVVCSSGMGTSRLLSTRLEQVFSEIERIT 442 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 SV L++ II+ + + P + + L + + L + Sbjct: 443 QASVSD-LKSLDLSQYDGIISTVNLDIDS---PYLTVNPLLPDSDISYVAQFLNT 493 >UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-binding protein n=3 Tax=Staphylococcus RepID=B9CU63_STACP Length = 675 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 71/422 (16%), Positives = 140/422 (33%), Gaps = 23/422 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +++ IL L Q + + GV A + + E L +QL+L+ Sbjct: 88 LSIEEQKVIILYALIQAKHAIKQFSLAHEIGVS-IQALAKLLDDLEEELLSYQLSLSRKR 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFR-------LCPSFITSQFTPALKSELKRRGIARNF 123 ++G +R L + + F+ + +S + + R F Sbjct: 147 GEGVYLKGPESKKREFLSQLMVNNLNSTSVYSVIENHFVYQSLNHSQQSLV---DLDRIF 203 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 + L + +L L +++ + + G N + Sbjct: 204 KIERILMDYLG----QLPYTLTESSYLTLTIHIVLSITRMQNGEYVSLNKDIYETVKDTF 259 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 E +VA EI + + E F+ + + + D ++ I++ VN Sbjct: 260 EHEVATEIAKRLEEIHNVEFNQAEITFITIHLRGAKRKGTKDSNSEEDNSSKK-IRQFVN 318 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 + F D++ L + L H+ A+NR I N L E YPRL T AL Sbjct: 319 TVTRISGQHFKDKENLIEGLTLHINPAINRLKSNIETYNPLTEMIKFKYPRLFETIHKAL 378 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 + + E + + FG + + + I+++ + + +L ++ Sbjct: 379 HMV--WSDLIFPESEIAFIVLHFGGSIKNQGNRF-LNILVVCSSGIGTSRLLANRLEQVF 435 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I SV L II+ + + P + + L H+ + L Sbjct: 436 SEIERITQASVSD-LNVLDLNNYDGIISTVNLDIEA---PFLIVNPLLPEHEVSYVASFL 491 Query: 424 ES 425 + Sbjct: 492 ST 493 >UniRef50_Q5WJH1 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WJH1_BACSK Length = 689 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 60/415 (14%), Positives = 137/415 (33%), Gaps = 27/415 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L+ +R I L L+ ++ F+E+ V + D+ + + L + L L+ Sbjct: 86 LNEDERLMAIYLYLYVSREEISLFHFTEMLDVSRGTINDDLKKLANQ-LEDYSLKLSYSR 144 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y +EG + L I + + + + L Sbjct: 145 LRGYHIEGEESTIK-------YVALLLITKLIDDNRSHYIFHLIME---EQGLSLFNKLT 194 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 ++ C + F D+ + Y+ +L GI F E E+ VA E Sbjct: 195 SVCKTCFYKANIHFSDNDLLKVT-YIATFILMRGRGIKEDFLQENNFVFEGHNEYAVAGE 253 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I + + F+ L + L++ I++++ Sbjct: 254 ILDKLGMDHNEHIE-----FLTSLLLAFSI-GDSYLNTPDYPMLKKIIEKIMIKLEVSYG 307 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 ++ ++ + +Q+Y H A R +F I N L ++ + Y L + + L Sbjct: 308 IQLNSKEEVLEQVYAHFRPAYYRIIFQYPIVNPLKDKIKKQYNALFKLLKDILEPLNLPN 367 Query: 311 GVHLSDEESGLVAVIFGAWLM----QENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 + +SD+E + + F + N + ++ N + + ++L+ + Sbjct: 368 NITVSDDEIAYLTIHFATLIDIDVTTVNSTKMIKAAIVCPNGTGISLLLYKELKNIFPKV 427 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 +K + + I ++ L + P++ + ++ + K Sbjct: 428 YFLKPIPISKLDSLR-----DDIDIIFSTKLIKATQPILVVSPIMNNLEKATLIK 477 >UniRef50_B1CBZ7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBZ7_9FIRM Length = 716 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 64/431 (14%), Positives = 140/431 (32%), Gaps = 18/431 (4%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 SA +R I+ L + ++ S + D+ + + + Sbjct: 85 PYEYKYSAEERCSFIIGYLLKRNGYISIEKLSNELSTSISTITKDLENAEKWLEDKNT-K 143 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELK---RRGIARN 122 L ++ + +R L+ L L PS++ + + E Sbjct: 144 LIKKAGKGISIQIDEI-KRRALYRELTDEV-LTPSYVINYISNISLKERANTILLDDLFK 201 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 D L + + L + F L ++L + + + + + Sbjct: 202 DLDREFLIGQIQHLEKELGEIFSDETFSSLLIHLSIIVYRVSRNCSLKE-ITGETTLNNS 260 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQ---LRQSIK 239 +E+ + +I + R +P +E + + +V + + +R Sbjct: 261 IEYTLTSQIIENINTRFTITIPSEEIYYFTVHLLGAKVITKNTKYKFNETEAIIIRNIAT 320 Query: 240 RLVNHFRELGNVRFYDE-QGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 ++V L V F ++ + + D L THL + R + I N + E + Y L+ Sbjct: 321 KMVEEIGNLYAVDFKEKKEDVIDGLITHLIPTVYRIKYKKRILNPIYPEMEQKYSDLLGN 380 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK----QIILLTGNDSEREAQ 354 T+ ++++E +A+ F A L + L+EK + I++ G+ Sbjct: 381 TKIVCRHLSEYCKEEINEQEVSYIAMHFLAALH--SKLNEKTDMPKAIVVCGSGYGTAQV 438 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 + QL L + + + + II+ + L I + Sbjct: 439 VAMQLSSLFSVEIKAIVSQREIINLDKNNQNFDYIISTVEIA-NLSKDEYIKISPMFNHN 497 Query: 415 QQEQIRKMLES 425 +I K L + Sbjct: 498 DFLEINKHLRA 508 >UniRef50_D1ARA3 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARA3_SEBTE Length = 712 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 71/422 (16%), Positives = 145/422 (34%), Gaps = 15/422 (3%) Query: 8 PSVLSAPQRRCQILL-TLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 S +R I++ LF T + GV + D+ EI + +L L Sbjct: 92 DYKFSERERTEFIVIRILFNTQEKLTTEKLAFELGVSELTIKKDLKILREEI-KDRELAL 150 Query: 67 TTGYDGSYRVEGTVLNQR-LCLFHWLRRGFRLCPSFITSQFTPALKSELKR-RGIARNFY 124 + V G R L +++ + + LK E+K+ R Sbjct: 151 QFDKKRGFLVTGDEEKIRQKQLKYYVDYNIGYSRNNTEA-IPDFLKFEIKKILTDYRKNI 209 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 D +L V S L + + L LY+ + + AG + P+ + E Sbjct: 210 DTEDLYKYVENLSGSLDRIVSNEAHEVLVLYIMILVKRLQAGSHTEEKPVLNEYLLMTKE 269 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 ++V + + + +E L + + ++ + +++++N Sbjct: 270 YEVISNSINELESKYKISIHKNEVLKIVDYLLGSHTYNFDYSFYENWVETEILVRKIINE 329 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + V ++ L + L H+ + R I + EE L+ +LA Sbjct: 330 VDKYTEVEITKDELLFEGLLNHIKPTIYRIKNNIFFPGLVLEEIINTEKELLEIVGKSLA 389 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLREL 362 E+ G +S+ E+ L V F + + + K +I+L+ + QQL Sbjct: 390 DLENYIGCKISNIETALFTVHFKLAIERAKEKQVKIYRILLVCSTGYATSNLLSQQLSAE 449 Query: 363 T--LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMP--LPLFSPPLIYTDLTLTTHQQEQ 418 + I + V + + LII+ + + + +I + L+ +E Sbjct: 450 YNIEIADLIPYYKVFDYDLSD----IDLIISTIDIEEGIIKKNINIIKVGVVLSDSDREN 505 Query: 419 IR 420 +R Sbjct: 506 LR 507 >UniRef50_C0ZED9 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZED9_BREBN Length = 656 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 78/427 (18%), Positives = 144/427 (33%), Gaps = 23/427 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L R L L M ++ GV + D+ + + +L +L L T Sbjct: 90 LPQKDRVKHFLFILLLSEGYQRMNDLADHMGVSRNTVVADVKDAEK-LLDGWRLELVTKQ 148 Query: 71 DGSYRVEGTVLNQRLCL---FHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 RV+G+ ++R L H L G + + F + + + Sbjct: 149 RYGVRVDGSERHKRYALENLIHDLLDGIDMY-RMVQGMFLENGQEARTGPLLEKWLISRA 207 Query: 128 NLQALVNLCSRRLQKR---FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 L +++ + R + L + L + G + + A Sbjct: 208 ELGEIIHSIKAWMNAAAETLADRALISLLIRLCIVFHRVQRGQLVTADDAELGEARHWSG 267 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 +++ R +R +P E + L A + + Q+ K L Sbjct: 268 YELFSHEVRALCQRLHVDIPEHEIAYACLPLLGTEQVPREARAGRIVLDVFQATKELTEA 327 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 +++Q L L+ HL +LNR + N L EE R Y R+ + + Sbjct: 328 VSNRMLAPLHEDQELMRLLFAHLDDSLNRYRQGVLFANPLTEEIRRSYARMFDAVKRSCE 387 Query: 305 GFESEYGVHLSDEESGLVAVIFGA----WLMQENDLHEKQIILLTGNDSER--EAQIEQQ 358 + GV+ D + + F A WL Q+ + ++ TG + R + +E + Sbjct: 388 EVFWQRGVYWLDADIAYFVLHFQAGYDRWLEQKKA--DALVVCGTGRGTSRFLKTYLESE 445 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 LR L ++ L S + A R +II+ + P++ T Q Sbjct: 446 LRSLRVVGL----CSSTEVEKYLASRRVDVIISVLPI---KAEVPVVIVSPLPTRQDINQ 498 Query: 419 IRKMLES 425 I+ LE+ Sbjct: 499 IQNCLEA 505 >UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=Clostridium difficile RepID=C9XMT3_CLODC Length = 642 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 71/411 (17%), Positives = 144/411 (35%), Gaps = 18/411 (4%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R IL + + + V DI + IL + L L + Sbjct: 94 ERNQYILKYILYNNTYIKLEDLANSLYVSKFTILNDIKRI-KPILSKYNLILVSKPYYGV 152 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 +VEG ++ R C+ + I F + R N D LQ +V Sbjct: 153 KVEGKEIDIRRCI----------SNNMINRNFENYIIGITDREIELFNNVDLIELQRVVL 202 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 + F ++ ++L + + G + + + I + Sbjct: 203 SEINKFNINFLDFNLKNFIIHLAITISRILDGYC--LDNVLDVVLTDFQSNTTVENIFNY 260 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + + + + +++ F +++ D ++ + ++ ++ Sbjct: 261 IESKYTIIISKADRVYLYNHFITKSSLLDN-VSNRVDTKIIEYVEEILEVINNQYTFDLR 319 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 ++ L D L H LN + + N L YP T A+ L Sbjct: 320 NDSVLFDDLVLHFKSILNSKSYNLNKVNPLINTIKSNYPLAFEITLNAIEKVFKNSIYSL 379 Query: 315 SDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 +++E G V++ GA + + +N++ K ++L+ G+ +E QL ++ +NI + Sbjct: 380 TEDEIGYVSLHIGAGIERFFQNNIKCKNVVLVCGSGYGSSRLLEVQLNKVFHDKINI--L 437 Query: 373 SVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +F Q A + + I T+PL S P++ DL L E I K + Sbjct: 438 QCLSFNQFLASELSDVDIIISTIPLNHDSIPIVLVDLKLLKKDIENISKSI 488 >UniRef50_A8RAP2 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAP2_9FIRM Length = 682 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 64/422 (15%), Positives = 143/422 (33%), Gaps = 37/422 (8%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 A V+ +R ++ L P + + + + + D+ + +E L + L Sbjct: 83 ASDEVMKPKERVYYLICWLLYPQSPVHVESIMDEMEISRNSVFNDLKQV-KEELESYDLC 141 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 L Y + G L++R T + + +F + Sbjct: 142 LEFDIKRGYSINGKTLSKR------------------TVLLYYLRLLLNRIHYKSLHFLN 183 Query: 126 DTNLQALVN-LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 ++++ N L L+ E L + C++++ +F+ L+ + E Sbjct: 184 SSDVEDFYNRLIKISLEMNNEYDFEMLLSIACLLCIIRNVKEQF-EFSLLELKDLGKTSE 242 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-DRQLRQSIKRLVN 243 Q E L++A+ + L+ D QL + + L + Sbjct: 243 --------LRLIDIYFQDFNVHERLYLAVHLLGSKAGSTLKVKDDESDIQLFELAQHLCD 294 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F L ++ D+ GL + LY H + +I + N L EE Y L + Sbjct: 295 VFERLAYIQLVDKNGLINSLYIHFKLTMYYYRLSIQVVNPLIEEVKENYSDLYQLVSEIC 354 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLRE 361 SE+ + D E + + FG L Q + + +++++ + +++++ + Sbjct: 355 KDLSSEFPFPVLDSEIVYITMHFGGHLRQGSGKFYRKIRVLVVCPSGISTSTLLKREVEQ 414 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 L + + + I++ + + P I LT + +I Sbjct: 415 LYSNVTVVATAAASNIDEYE--EDIDFIVSTIDIQCEM---PWIKVHTILTNEDKSRIAS 469 Query: 422 ML 423 ++ Sbjct: 470 LM 471 >UniRef50_C0X3T6 BglG family transcriptional antiterminator n=22 Tax=Enterococcus faecalis RepID=C0X3T6_ENTFA Length = 669 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 64/418 (15%), Positives = 140/418 (33%), Gaps = 25/418 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R+ I L + ++ + V DI + R L + L Sbjct: 71 YSETERQALIFLLTYSEIEELSVYHYQNFLDVSKGTILADIKKV-RHQLATENIALFYER 129 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + +EG R +WL R + AL L + +++ ++ Sbjct: 130 KRGFYLEGDEFRIRRFGKNWLARLLQQKSGTF------ALFCWLSQHQMSQY----AKMR 179 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + L + Q + + + +L + + G + + +S + V++ Sbjct: 180 DGIQLAVQEAQLQLVPSRLDEISYFLAFSQKR--LGKYETVVWPENQLIQSLRAYPVSRR 237 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I E LF+ + + LRD L ++ L Sbjct: 238 ILSDL--VGPVANVETESLFLTICLMTA-LQGELRDTKLE--FLLDISGEIIRKMELLAV 292 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 V+F + L +Y HL A R + + N L ++ + Y L ALA E Sbjct: 293 VQFEQPRELLMNVYYHLVPAYFRINYGFYLPNVLIKDIRQSYRSLYHLCEQALAPLEKLT 352 Query: 311 GVHLSDEESGLVAVIFGAWL---MQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + EE G ++FG + E + + +++ + ++ +LR L + Sbjct: 353 KRSIPSEEIGFFTILFGGEIFGQKNEQRQEKLKALIVCPSGISSSLILQSELRRLFPMIE 412 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 + +V+ + +I + + + + T +++ ++ Q+ ++S Sbjct: 413 FKETNAVREIENVSE-KSYDIIFSTVPIET---AKKVYLTKPIMSSLEKNQLMHQVQS 466 >UniRef50_A6CNR6 MtlR n=2 Tax=Bacillus RepID=A6CNR6_9BACI Length = 695 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 64/420 (15%), Positives = 153/420 (36%), Gaps = 16/420 (3%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 P+ + +R+ +L+TL G + G+ ++ + E + ++ L LT Sbjct: 84 PTDETPEERKLSLLVTLLHEGPYFKKQVLANHLGISPATLTVYLDELTDWLSKFSVL-LT 142 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 V ++R L ++ I K + F + Sbjct: 143 RKRGVGVEVSADEASKRHALANFF---LVYFYEEIIESLYLLQKGTHLNEPVLGYFSPEN 199 Query: 128 NL--QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 L VN + Q + D L +Y+ + + + + + + + E+ Sbjct: 200 MLAVDQTVNRIFHQEQTKLTDSDYIGLVVYICLSIQRTGSNLLLEEPAVSPS--DYSAEY 257 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 ++ + IG R + + +++++ +V + L Q IK+++ Sbjct: 258 RLVERIGAELDHRISTSLMKSDIHYLSVILKGSKVQAADSIDYD-SIILGQLIKKVIEDV 316 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 +V D+ L L H+ ++ R + + N L ++ + YP L R +L Sbjct: 317 STKLHVDLSDDFSLYQGLLAHMEPSIFRLKQKMELFNPLTDDIKKKYPVLFMAVRDSLE- 375 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQL-RELTL 364 +H ++E V + FG+ L+ + + +++ + ++ +E+T Sbjct: 376 -NEFKDIHFPEDEVAFVVLHFGSALLMHEEKVKINAVVVCPTGIGTSKMLASRIQKEITE 434 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + +++ +S+K F Q+ + + ++I+ +P L+ IR L+ Sbjct: 435 IN-SVEILSLKDF-QSASLKEYDIVISTVRLPFT--DIDYTLVSPLLSDKDIGSIRNYLQ 490 >UniRef50_B4U0A9 Transcriptional antiterminator with PTS regulation domain n=31 Tax=Bacilli RepID=B4U0A9_STREM Length = 550 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 64/424 (15%), Positives = 142/424 (33%), Gaps = 21/424 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH-QLTLTT 68 V+ +RR + + T+ +N V + D++E E+ Y+ ++ L Sbjct: 89 VMKGDERRSLSAIYIAVATERVTLDKLMMINDVSRNTILNDLAELREELSSYNNKIQLHA 148 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 Y + + L +L + S F +L ++ Sbjct: 149 TKAKGYYFDCHPM----ALIQYLYKVLAGVYQGGNSSFIELFDHKLSETQGLSAYFSKEV 204 Query: 129 LQ---ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES---- 181 L + L L K +D F+ L + L + Q + + +S Sbjct: 205 LDYFHEYLFLSQASLGKTINIQDSQFMLQILPFIL---LSYRNMQLHSETKTALKSDFNL 261 Query: 182 ---CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 E+Q+A+ + + E +A+L R Q Q+R +I Sbjct: 262 IWKRKEYQIAKALASELYHNFKLHLDDIEVGMVAMLMLSFRKDQDHHVESQDYEQMRATI 321 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 ++ + F ++ L QL H + R + I N L + Y L Sbjct: 322 GDFIDQLELRYQLHFTHKKDLLRQLTRHCKALVYRKAYGIFSINPLTDHIKEKYEELFAM 381 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQ 357 ++ E + + L+D++ + + G L + EK ++++++ + + + + Sbjct: 382 AQSCAVILEQAWQIRLTDDDVAYLTIHLGGELRHSHADQEKTKLVIVSDDGIGIQKLLLK 441 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 Q + L I+ + Q+ ++ I T P++ + L+ Sbjct: 442 QCQR-YLPNCQIEAVFTTEQYQSVFDL-MSVDIVVSTTDALEALVPILIVNPILSDDDII 499 Query: 418 QIRK 421 ++ + Sbjct: 500 RLIR 503 >UniRef50_B8DCH4 PTS system, IIA 2 domain protein n=15 Tax=Listeria RepID=B8DCH4_LISMH Length = 686 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 64/415 (15%), Positives = 143/415 (34%), Gaps = 26/415 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R ILL L ++A F+ V + D+ + + + T+T Sbjct: 88 SENERANLILLMLLTAKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKE--TTVTYSRA 145 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 Y++ G+ R L + + L GI + + ++ Sbjct: 146 SGYQLAGSEWELRKV----LTQVVSSVKEMFRGE-----HYFLSYSGIEKVQLME--IRR 194 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFN-PLQRRWAESCLEFQVAQE 190 + +Q +F I L L L+ + + E+ + Sbjct: 195 TLEEAEAMMQIKFTYEQIELLPYLLSVMFLRIRDRRLIDTAFHIDEKSLSDTREYHITDI 254 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + PVP E LF+ L + + L + + ++ F + Sbjct: 255 LLEK-----TGPVPEQERLFITLQLLTTNIFSGEILTEKLTEDLEKVVLTCLDLFEKKAL 309 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 V ++ L ++L HL A R + + +++TL E+F + + L + A Sbjct: 310 VSLKNKHILIEKLLLHLKPAYYRIKYQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFI 369 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 G + E +++ G+ ++ +ND++ +K+ I+L + +E L +L Sbjct: 370 GREIPAGEIFFISLFIGSDMIPQNDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHF 429 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +SV+ + T ++ + + + + ++ Q+R+ + Sbjct: 430 YPTISVREY--TFFKAEVDIVFSSIPL---KDGENVFVVQPFMNDIEKTQLRQHV 479 >UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TNE9_LACRL Length = 644 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 67/413 (16%), Positives = 143/413 (34%), Gaps = 15/413 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S R IL L + ++ +E+ + + ++ R+++ L Sbjct: 89 SDRSRERYILSELLRSQDYISIDQLAEVLFISRRVIQRNLDNLNRQLIGT-DTELLRIPG 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 R+EG +R LF L + + S + + + L Sbjct: 148 RGVRIEGEEGKKRKVLFKMLSQYWDSDWRMDQSSEGWTADPAIAENPNIDSSVVNI-LAR 206 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 +V S +L I L ++L + + AG N R + + + A ++ Sbjct: 207 VVQNASEKLGLSLSEYAIQSLVIHLAIAINRIKAGNPIGQNDDLIRNIGNERKSE-AVQL 265 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 ++ +P +E ++ + + + +K L++ Sbjct: 266 AAMVEKEVNVRLPDEEIAYIQIHLIAASANQVSLANQHSMIPIPERLKELLH-------- 317 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 F ++ L L H+ A+ R GI N E+ R YP+ +E Sbjct: 318 PFGYDRDLLFGLTVHMQAAVKRLRVNAGISNPYTEDIKRNYPQAFDEALIVSDDYERTEH 377 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 + ++D+E VA+ A+L + +H++ ++ + ++R +K Sbjct: 378 ISMNDDEVAYVALHIEAYLERRRAIHQRVNAAIVCSTGLGSAQLLAARIRREFSDISIVK 437 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 S++ F Q + G LII+ T+ LP P + ++ +R ++ Sbjct: 438 IWSLQDF-QRNSLVGIDLIIS--TLRLPKGDIPTVTVSPVMSDSDALLVRNLV 487 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 96/317 (30%), Gaps = 35/317 (11%) Query: 17 RCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRV 76 R Q ++ L T A + GV D+ E LR Q+T+T V Sbjct: 7 RQQKIVRLLLSTSNTTAAELATQVGVSRKTVYSDLREIVLA-LRDDQVTITVTPRKGITV 65 Query: 77 EGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLC 136 + + L +L S + + + SEL R +++ L ++ + Sbjct: 66 TAKDADIQNILRKLKSEKTKLPDSDRSRE--RYILSELLRS---QDYISIDQLAEVLFIS 120 Query: 137 SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQ 196 R +Q+ ++ + + + + +R+ + + ++W Sbjct: 121 RRVIQRNLDNLNRQLIGTDTELLRIPGRGVRIEGEEGKKRKVLF--------KMLSQYWD 172 Query: 197 RRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-DRQLRQSIKRLVNHFRELGNVRFYD 255 S DP + D + + R+V + E + + Sbjct: 173 SDWRMD-----------QSSEGWTADPAIAENPNIDSSVVNILARVVQNASEKLGLSLSE 221 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGID--NTLPEEFARLYP-RLVRTTRAALAGFESEYGV 312 L HLA A+NR I + L V+ E E V Sbjct: 222 YA--IQSLVIHLAIAINRIKAGNPIGQNDDLIRNIGNERKSEAVQLAAMV----EKEVNV 275 Query: 313 HLSDEESGLVAVIFGAW 329 L DEE + + A Sbjct: 276 RLPDEEIAYIQIHLIAA 292 >UniRef50_B0MAW6 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAW6_9FIRM Length = 688 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 62/419 (14%), Positives = 132/419 (31%), Gaps = 14/419 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R + + L T+ E GV + D+ E + + + +TL + Sbjct: 88 LSKKERSTILAMILLNASGYVTVDQLKEKIGVSRNTLLQDLQEL-KIWFKENGMTLVSQV 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y +E + L+ R + L + LK + ++ Sbjct: 147 RRGYIIEASELDVRKGILKLLEVNGDDNYYKNGYDLSVFWNLLLKEADSLEIY---EKMK 203 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHA-GITPQFNPLQRRWAESCLEFQVAQ 189 + Q F L + P + + + + ++ ++ Sbjct: 204 NCILEEEEETQIFFADYSFFEAVTELTIVANRIVRKHFLPGYFTNEWNYLKEGSKYTFSK 263 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + V E L+ + +LR I + Sbjct: 264 GLFGKISDMFQMDVREVEILYYTECLNGKSYLKDDA-QKTNALELRVMIAETIYQISSCF 322 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + FY + L D L H+ A++R + + N L + + YP + + + L E Sbjct: 323 GIDFYLDFTLYDLLVAHMRSAVHRLKNSEVLVNPLKDTLMQDYPEIFESVKQHLGSLEDY 382 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEK----QIILLTGNDSEREAQIEQQLRELTLL 365 G S++E + + F + + +E EK ++ L+ + +L+ L Sbjct: 383 VGQKFSEDEMSFMVLYFASVMEKEKAETEKSRKVKVALVCATGRGTAQFMMAKLKTLD-- 440 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYT-DLTLTTHQQEQIRKML 423 I+ +S+ +F + T+PL + P + L I++ + Sbjct: 441 -DMIEIVSISSFHNMREIEKNGTQMIISTIPLDDVNIPYVEVRSPMLEKDDILDIQRKV 498 >UniRef50_A4VY33 Transcriptional antiterminator n=33 Tax=Streptococcus RepID=A4VY33_STRSY Length = 562 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 67/418 (16%), Positives = 140/418 (33%), Gaps = 10/418 (2%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREI-LRYHQL 64 + V+S P+R +L+ + T+ EL V + D++E ++ +++ Sbjct: 82 SYTYVMSMPERIQLMLVYICITPERVTIERLMELTEVSRNTVLNDLNEIRTQLAQEQYKM 141 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 TL Y + LN+ + L F L + + + Sbjct: 142 TLYVSKSHGYSLVCHPLNKIQYVHSLLYTIFLDANKGFLQVLEAKLFELVGCQLLFSEEM 201 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLL--QHHAGITPQFNPLQRRW--AE 180 LQ V+ ++L K+ +I F+ L + LL ++ + + + + Sbjct: 202 AQF-LQGQVSQLEKKLGKKINRYEIEFMLKVLPFLLLSYRNMELDDLEERAILKEFEQVR 260 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 +E++VAQE+ + + E +A+L R + Q L++ ++R Sbjct: 261 ERIEYRVAQELKDALLQTFDLKLDEIEISLIAILLLSYRKDSDVHVFSQDFIDLKRVVER 320 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 ++HF + L L H L R + I N + ++ Y L TR Sbjct: 321 FIHHFEIHSPFELENPDELAKHLLAHCKALLFRKTYGILSKNPMVQQIQDKYSTLFAMTR 380 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQ 358 + E E+ + LSD + + + G + + + + L+ + + +Q Sbjct: 381 VSGKILEEEWQIELSDGDIAYLTIHLGGAIRRSGTRKAQTQIVYLICDEGVSVQRLLYKQ 440 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQ 416 + + + F +I PL+ L Sbjct: 441 CQHHLPDKKIGAVFTTEQFKSVEDLLEVDFLITTSDG--LETDFPLVQVHPILDFDDV 496 >UniRef50_C2HB07 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2HB07_ENTFC Length = 675 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 66/420 (15%), Positives = 145/420 (34%), Gaps = 25/420 (5%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 +V + +RR + L ++ + ++ F + V DI + +E+ + LT Sbjct: 73 AVYTEQERRDLLYLMVYSNTIPISVFHFQDFLQVSKGTVLSDIKKVRKELEGE-ECQLTY 131 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 +R+ G + R + R RL S L + L A+ Sbjct: 132 TRKAGFRLLGAEVILRKEAKN---RTARLMQSLAGRFGLTYLNAMLSLDCYAKA------ 182 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 + L++ RF + L YL + + + L Sbjct: 183 -RDLLDNTISLSDLRFAPNRMDELAYYLSLTTNRMGKISVEKVKDAE------LLASLAI 235 Query: 189 QEIGRH-WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 +I RH E LF +L + + V +++ L + +++ Sbjct: 236 NDISRHVLTGLGYSEHLESEILFFSLCLASI-VEGDIQE--PALDFLLECSSEVIHRMEF 292 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 L + F + L ++ HL A R ++ + N + ++ Y + TR AL E Sbjct: 293 LMAIEFDSFRELLMNVFYHLVPAYFRISYSFYLPNVMIDQIKHQYATIYEMTRKALRPLE 352 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQ---ENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 G + +EE G ++FG + + E + + +++ + ++ +L++L Sbjct: 353 KRIGKSIPEEEVGFFTILFGGEIRKVDEEERNRKIRAVIVCPSGISSSLILKSELQQLFP 412 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + L + + L ++ + + L L +T ++ Q+ ++ Sbjct: 413 MILFTET-NSADRLHEVDETSYDIVFSTVPLTLTNKKKSLYVLQPIMTDLEKNQLINQVQ 471 >UniRef50_C3WG94 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WG94_FUSMR Length = 684 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 62/414 (14%), Positives = 145/414 (35%), Gaps = 15/414 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 +S + + +I+L + E V +I RE L + L L T Sbjct: 81 ISTDEIKDEIVLFKTLFQEKLNLKDLGEELDVSR-TTIKNIVREIREKLEKYNLKLETEI 139 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKS-ELKRRGIARNFYDDTNL 129 + G N R +L + F S + L L + D + Sbjct: 140 QKGLILVGEEGNIRTAQLKFLNKYFNYFSSKHSEFIKKLLDEIFLLEYKEISKKFIDILM 199 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + L + F+ +++C+ + N +R E+ + Sbjct: 200 EEKNILIADEPYLTFQ----NYICIMIWRLKNGKFLTKMENENFFKR-----TAEYSQIK 250 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + ++ + E L + L+ + + ++ K+++ +F Sbjct: 251 NNIKIIEKNFNIFINDIEILKLTDLYLGSHNYCNESNFYNFWIEIDVLAKKIIENFSINM 310 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + ++ L + HL ++R +I ++N++ +F + Y + T+ +L+ E Sbjct: 311 EIDLTKDKDLLYGIINHLKPTIHRLKNSISLENSILTDFLKNYKPIFEATKKSLSPLEDF 370 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 G+ ++ +E + F + + + L EK+++++ G + QQL+ + + Sbjct: 371 IGMEITPDEIAFLGTHFKSAIDKNFSL-EKKVLIVCGFGYGTSKLLAQQLK--NAYSVFV 427 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K + L+ LII + S P++ + L+ + ++K Sbjct: 428 KDIIPIYKLEEYDLDEIDLIITTLHLDNSF-SKPIVQVNTILSNEDKINLQKAG 480 >UniRef50_C3WDH7 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH7_FUSMR Length = 675 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 53/414 (12%), Positives = 145/414 (35%), Gaps = 17/414 (4%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 P + S+ +R ILL + +T S+ + + + + +L + L L Sbjct: 79 PYIPSSKERELFILLNICL-IRKIKQSTLSDFLDISISTVKAHLRDIRK-VLDVYGLKLE 136 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 +EG+ R C + LC + + L + Sbjct: 137 ILPKKGLVIEGSEEQIRQCTL----KAITLCKREKSKFLDNIIYEYLGD-------INQE 185 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++ +N C + ++K + Y+ + + + N + E+ E++ Sbjct: 186 GIKLFINYCQKLMEKIISDEAYDIILKYITLVIYFNKNDNKIK-NIKNSNFLENTKEYEA 244 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 + + +E L + F + ++ ++ +K + + Sbjct: 245 IIQSKALLEGFYEMEFSKEEYLKITDYFLGSHTYNITYSYYENWVEIEIMVKSFIEQVNK 304 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 V +++ L L H+ + R I ++N++ E YP L + A+ E Sbjct: 305 ELEVDIANDETLILGLINHIKPTIYRIKNGIELENSIYGEVVESYPNLFSIIKKAVEKLE 364 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 + G+ +++E + + F A + + + + +++++ G+ + QQ++++ + Sbjct: 365 NFIGITFTNDEIAFLTIHFKAAIDRNIKIKKEKLKVLIVCGSGYGSSKLLAQQIKDIYRV 424 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 + + + + + LI+ + + +I + L+ + + Sbjct: 425 EI-VDAIPRYLLEKVERRKDIDLILTTVPLDNFNTNRDVIRVNPILSKEDIQSL 477 >UniRef50_C5RM48 Transcriptional antiterminator, BglG n=1 Tax=Clostridium cellulovorans 743B RepID=C5RM48_CLOCL Length = 686 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 63/413 (15%), Positives = 137/413 (33%), Gaps = 10/413 (2%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 + QR+ I L + FS V SLD+ + +L L L Sbjct: 88 FTKEQRQIIIACELLVSKEPLKASYFSHKFNVVMGSISLDLDSIEK-VLITKNLCLIKKR 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + G+ N+R L F+ ++ + + S +K + + Sbjct: 147 SYGISIGGSEWNKRNAFVDLLFE-FKTFDDLLSYFYNRKIDSVVK--SFFEIIFGSKTIN 203 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQR--RWAESCLEFQVA 188 + ++ + + + D+ +L ++Q L + Q+ ++++ Sbjct: 204 LVKDVLNEDKFQSLKINDVKYLSFFIQVLLAIKKTENSDNILLPQKVKEDIRVLVDYESI 263 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-DRQLRQSIKRLVNHFRE 247 + + ++R + +P DE ++ L S + D ++ LV + Sbjct: 264 KFLDESLKQRGIV-LPEDELGYLYLYLSDYKYLYKKSGNSTESDIDYGDVVRELVTEVSK 322 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 N + L L H Q + + N L E Y +L Sbjct: 323 KINSNLSIDDQLIKDLTQHFKQTFYTLNLGVKVINPLINEIEEHYSQLFEIINEKCKLIF 382 Query: 308 SEYGVHLSDEESGLVAVIFGAWL-MQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 S Y + + EE G + + + Q++ L + +++++ I +++ L Sbjct: 383 SRYNLKIPREEVGYITMHIEVAIQRQQSILKKIKVLIVCSGGIATSRIINNKIKSLFPDI 442 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 +I S+ + LI+A + + + +I LT E+I Sbjct: 443 EDITIGSLHDINDSNLENKYDLILATVPV-MSNEASNIIEVSPFLTQENIEKI 494 >UniRef50_UPI00017890F3 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017890F3 Length = 689 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 65/424 (15%), Positives = 134/424 (31%), Gaps = 13/424 (3%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 P+ S +R+ +L L + + + V S D+ E ++ L Sbjct: 86 GKPADYSVEERKILMLCALLEADEPIKLFALAHSLKVTVPTVSNDLDELEP-WMKRFNLK 144 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQ-FTPALKSELKRRGIARNFY 124 L ++G +R + T + I + Sbjct: 145 LIRRRGYGIEIDGAEGVRRRAIGRLAEEYLDYSDLVGDGYSDTREPVTARLLSMIDKPAL 204 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 D + + + L + + G + + + S + Sbjct: 205 LDVEKTLW--DMNWDWTEDLSESAYTSTLIALSVSVNRIKRGRGMEAADIA-GYPPSPVS 261 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 + A + E +++A LF + + + D ++ + RL+ Sbjct: 262 VEEAGDFVGRLGETLEMNFRESEMIYIAQLFEAAKNMSEVSELVHADVEMVEIAHRLIER 321 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + + F +++ L L H+ AL R I N L + Y L R ++ Sbjct: 322 VQGRTGIPFQEDRTLRAGLVEHIGAALKRIREGTRIRNPLLSPIRKDYEELFGIVRRSVD 381 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQLRELT 363 + + + DEE G + + FGA + N H + IL+ + + +L Sbjct: 382 ELK--LDLSIPDEEIGFLVMHFGASSERLNQPEHHLKAILVCSSGLSSSRLLGTRLN--K 437 Query: 364 LLPLNIKHMSVKAFLQTGAPRG-AALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 +P +V + P+ LII+ +PLP + LT +E + + Sbjct: 438 EMPQIEVLGNVSWYEAARIPKEQYDLIISTIDLPLPKDR--YVRLSPLLTADDKEALLRF 495 Query: 423 LESA 426 ++S Sbjct: 496 IQST 499 >UniRef50_A0AFI1 Complete genome n=2 Tax=Listeria RepID=A0AFI1_LISW6 Length = 687 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 58/416 (13%), Positives = 144/416 (34%), Gaps = 26/416 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + +R +LL + + + F+ DI +++L+ L + Sbjct: 88 TEKERVHLLLLMILTSETALSTSHFTSALQFSKATIMRDIKML-QQLLKKEDLEILYTRQ 146 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 Y+V G R + + + + + I + + Sbjct: 147 NGYQVIGDEWQIRRKMMELIAE----VHQMFHGDNYLRKFTSITKETIQQIY-------E 195 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQ-FNPLQRRWAESCLEFQVAQE 190 + ++L+ +F I L L + G + + E+Q + Sbjct: 196 KIERVEKKLELKFTDEKIFILPYVFASMLRRIEMGKGISSYFQINYNELSDTNEYQAVEI 255 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + + + +E L+MAL V + +L +++ ++ E Sbjct: 256 LL-----EGVADLAEEERLYMALQLLTSNVSYQSVLTENQLPRLNRALDAMLTILEEKAL 310 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 ++F + L ++L H+ A R + + + +P+ + L + ++ E+ Sbjct: 311 IQFKNRVELVEKLSLHMKPAYYRIKYHLTMSFMIPDVIHEEFNALHFLVKESIWPLENFI 370 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQ---IILLTGNDSEREAQIEQQLRELTLLPL 367 G + DEE + + G L++ ++ + + I++ N IE QL +L Sbjct: 371 GETIPDEEIYFITLFIGGHLIKTGEITQHKKPSAIVICPNGVSISKLIESQLAKLFPEFH 430 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + MS++ F +T ++ + + L ++ +Q+++R+ + Sbjct: 431 FWQTMSIREFEKTA--PNVDVVFSVTPVETTCK---LYIMSHYMSFEEQQRLRQRV 481 >UniRef50_D1AIW4 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AIW4_SEBTE Length = 703 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 61/420 (14%), Positives = 142/420 (33%), Gaps = 21/420 (5%) Query: 15 QRRCQILLT-LFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 +R I + LF + + L V + DI + ++ L+ L+ Sbjct: 89 ERVEYIYIYILFNTSRKLNIINLASLFQVSELTIKSDIKKL-KDFLKSKDLSFRYNNIKG 147 Query: 74 YRVEGTVLNQRLCL-------FHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + ++ + + R + FI Q L + +K+ D Sbjct: 148 FYIDSSEIALRKEMIKIFMDKLFNFENTANKMNLFIDYQIKDILNNYIKQ-------IDQ 200 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 L+ + +L + + L +Y +L+ + + + E++ Sbjct: 201 NFLKNYLKDIESKLVENTSNEVFELLIIYFSIAILRINQNNIITQSDFYNTYIIRTKEYK 260 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 + E +++ +E L +A F + ++ ++ +++L+ Sbjct: 261 ILTENIDILEKKYDVHFNEEEILKLAEYFLGSHTYNYSYTFYENWIEVEILVRKLIGEVS 320 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + +V ++ L + L H+ + R I + N EE L T + AL Sbjct: 321 KNCSVDISKDKLLFEGLLNHIKPTIYRIKNDIYLPNIGFEEILENCQELFFTVKNALIDV 380 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 E G + D+E L V F + + E ++ + G+ + + Q+L L Sbjct: 381 EKYIGHKIKDDEVALFTVHFKLAIDRIKEKVNEFSNVLFVCGSGYASSSLLAQEL--LDT 438 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLF-SPPLIYTDLTLTTHQQEQIRKML 423 +N+ + L+ + II+ +P + +I ++ L+ + + Sbjct: 439 FDINVVDLIPYYRLKDYNLKNIDFIISTVKIPETVKVEKEVIQVNVILSEKDKILLENKG 498 >UniRef50_A0AFK2 Complete genome n=18 Tax=Listeria RepID=A0AFK2_LISW6 Length = 644 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 64/426 (15%), Positives = 142/426 (33%), Gaps = 24/426 (5%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILRY 61 P A L P+ R + + L + ++ S D+ + + I Sbjct: 85 PKNADYFDLDNPEERVKYEIFLLLSSADYIKLEDLADTIYASRATISNDMKQVRKVI-AS 143 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 + LTL + ++ G R L + + P F K + K + + Sbjct: 144 YDLTLVSKPGSGVKIVGEEEKMRYTLTALI--ASKKAPESYLETFFEWHKQKDKLQKLMS 201 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 D RF + L L++ + + G + + L S Sbjct: 202 AVTDYFFAT----------NIRFTDEALQNLLLHMMILVERIELGHSLEQFEL---TDVS 248 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 E +A ++ + + + ++ L + R+ + D + I+ + Sbjct: 249 EEEIVIANKLATILESLFEITISSADKNYLLLQIASKRI-LNVEDKEISEFDDYAYIEGM 307 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 +N + D+ L L H+ L R + + + N + E R YP T Sbjct: 308 LNRIESHYSYHLQDDLQLKKDLIAHIHSMLYRVKYHMTVKNPMTEHIKRYYPLAYEITLD 367 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL---HEKQIILLTGNDSEREAQIEQQ 358 A+ + +Y ++ E +A+ GA L + + K +++ G+ +E + Sbjct: 368 AVESLKKDYPYDINQNELAYLALHIGASLERNYQISYYRHKSALIVCGSGFGTARIVEAK 427 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 ++ K +S++ + I T+ +P + P+I T + + Sbjct: 428 VKSAVSNLDITKVVSIQEY---NRFIHIEEDIILSTVRIPEKNKPVIKISNIPTNEELKM 484 Query: 419 IRKMLE 424 + +++ Sbjct: 485 LGAIIQ 490 >UniRef50_B2TIY2 Putative transcription antiterminator n=3 Tax=Clostridium botulinum RepID=B2TIY2_CLOBB Length = 654 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 63/416 (15%), Positives = 141/416 (33%), Gaps = 19/416 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + +R ++ L + T+ +E V D+ + + L + L L + Sbjct: 94 NPEERIDYLINRLVELNEIVTIDDLAEEMNVGRTTLVKDLKKV-DQKLDEYGLVLKRKTN 152 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++EG +N RL + + + + L + LQ Sbjct: 153 SGIKIEGDEINLRLIILEHICKTYNDS-------------IILLESNNILTKKEVIKLQE 199 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + L + + I+ L Y+ L++ Q + + E+++ + I Sbjct: 200 QIVLNLKENKFSVTEALINNLIRYITVMLMRLKNDKNITSLQSQYKIIKESEEYEIGKTI 259 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRD--RQLRQSIKRLVNHFRELG 249 + + + E +F+ + P + K++ + E Sbjct: 260 KSTIEALKDKKIDDLEIIFIVMPLLGRNAPLYHEVLRNLTIGENITLLRKQIFDKVFEFT 319 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + +++ L L HL ALNR + I N + +E Y + A + E + Sbjct: 320 GLSLEEDEQLIQGLEYHLYYALNRIVLNIKYKNPMLKEIKEKYKLPYEVAKIAASVIEDK 379 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTLLPL 367 Y V + D+E G +A+ FG ++ + K ++ G + +L+++ + Sbjct: 380 YQVQVEDDEVGYLALHFGTYVERAGKSFIKIENAAIICGTGLGTAKLLIIKLKKILGEEI 439 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 N K S F + A +I + + + T + + + +I + Sbjct: 440 NFKSFSDLDFTEEMA-SNYDMIFTLVDLDINTEIQIVKITSIFDESQLKGEIESQI 494 >UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1J6_ERYRH Length = 641 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 129/398 (32%), Gaps = 22/398 (5%) Query: 32 TMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWL 91 T+ ++ + D+ R ILR + + L Y + G + R + +L Sbjct: 114 TLEALADNLFISLSTLKRDLVSVRR-ILREYHIFLENDYKRGLVLTGDENSIRRLINDYL 172 Query: 92 RRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHF 151 R I +N ++ ++ C ++ Q Sbjct: 173 VLEKSTIDIN---------------RIIGQNTPRMDIIERIIVTCIQKYQLHLTDIGFKN 217 Query: 152 LCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFM 211 L ++++ L + G + + A+ + + +P E + + Sbjct: 218 LSIHIEIALTRIEQGKL-GLSNTTTSINTDSNAYLCAEALAVMLEEALTLKIPESEIINI 276 Query: 212 ALLFS-MLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQA 270 + S ++ + + + Q + ++ + F ++ L L THL A Sbjct: 277 YIHLSSQKKLHTDVDNINSESPHNLQILNEALDDIYRIYGSDFRHDEILKQGLMTHLESA 336 Query: 271 LNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL 330 L R + I N L +E + YP ++ + F + + +E G +A+ F Sbjct: 337 LKRIELGLSIRNELLDEIEKNYPFEIQIAKVLAFHFLKTNAIAFNLDEVGFLALHFCGAR 396 Query: 331 MQENDLHE---KQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAA 387 + + + I++ ++ +L L IK +S L Sbjct: 397 ERARQDEKSETTRAIVVCTTGVGTAMLLKAKLESQFGDALEIKKVSALYQLDKHDMDDVD 456 Query: 388 LIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 L+I+ + L P + +T I++ ++ Sbjct: 457 LLISTVHIDRNL-GVPTVVVSAIVTDRDIAHIKRYIKG 493 >UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9A5_9FIRM Length = 705 Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 73/424 (17%), Positives = 135/424 (31%), Gaps = 22/424 (5%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 LS +RR Q+L L A + GV + S D+ E + L +++ Sbjct: 126 GDRKELSRAERRQQLLTRLLSEQEPCKTAVLARALGVSESTLSADLDELETK-LHPYRVE 184 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + ++G + R + LR S + L + I D Sbjct: 185 MFRRPGVGVWLQGDASSYRRVVSALLR------SSMPEKELAEVLCGRMPENEIFSTLLD 238 Query: 126 DTNLQAL---VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + + + + Q L ++ + Q G P R Sbjct: 239 TKTAEKVWAALQQFEQEEQLHLPDAGFLALAIHCTLTIQQLRQGGDKGSAPRGLR----- 293 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 A + R +PP+E ++ L + + + Q +LR L+ Sbjct: 294 PAGNHAARLVAALNRAFGLTLPPEEAQYLELYLAAYLGAEDPWGSAQE-MELRNLEAALI 352 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + + L D LY HL L R I +N + YP L + TRAA Sbjct: 353 REMEKALHTDLSGYTSLRDDLYCHLRPMLLRVEQNIRTENPQLDTIRTAYPGLWKATRAA 412 Query: 303 LAGFESEYGVH-LSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLR 360 + ++ + +SD+E+ +A+ FGA L Q ++++ + +L Sbjct: 413 CDAVQQQFVLPAISDDEAAYLAMHFGAVLEQNAMFRLRLRVVVACPLGMGSSRFLASRLG 472 Query: 361 ELTLLPLNIKHMSVKAFLQTG-APRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 SV+ R II+ + L P + +L + + Sbjct: 473 NEFPSLQVEGCCSVRELNTADLRRRKIDFIISTVPLELDY---PAVCISPSLLEPDRAVL 529 Query: 420 RKML 423 + + Sbjct: 530 KDAI 533 >UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N6K6_9FIRM Length = 644 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 68/420 (16%), Positives = 136/420 (32%), Gaps = 26/420 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S+ R +L L ++ ++ V + I + I + L + + Sbjct: 92 SSQDRIKYLLNLLLYSDEYMSLDDLADNIYVSKNTLQNYIKTL-KAIFSKYNLEYISKTN 150 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ G ++R CL + + FT ++ +L Sbjct: 151 VGVKIIGNEDDKRKCLVENV---LSYNFQNYVTGFTK----------DEYTLFEGIDLDL 197 Query: 132 LVNLCSRRLQ---KRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 L + S +L+ + + L ++ + + N + Sbjct: 198 LKQIISNKLKNAHIKTNDFNFKNLIIHFALMISRIQFDCYINTNNTIKIDDNYT---DFI 254 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 +I + + E ++ L D D ++++ ++ L+N+ Sbjct: 255 DDIANEIEYTFNITISEGEKKYIYSHLVA---NTQLNDLVDNDNKIKELVEELLNNIYFD 311 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 N +++ L L+ H LN FA+ N L +P T A + Sbjct: 312 YNFDLRNDEILSHDLFLHFKSILNTKSFALNKRNPLLNTIKTNFPLAFDITLTCTAKIFN 371 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 + L+++E G V++ GA + + L K +IL+ G+ +E +L Sbjct: 372 KPPYILTEDEVGYVSLHIGAAIERCFSGSLQNKSVILVCGSGQATTRMLEARLNVFFKDK 431 Query: 367 LNI-KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 + I + S F+ + T+PL P I D L E I K L S Sbjct: 432 ITIVRKASYNEFINYTKRELLNIDFVISTIPLKSEHIPTITVDFALNNQDIEAISKFLTS 491 >UniRef50_C6DIT7 Transcriptional antiterminator, BglG n=5 Tax=Pectobacterium RepID=C6DIT7_PECCP Length = 516 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 67/429 (15%), Positives = 145/429 (33%), Gaps = 21/429 (4%) Query: 6 APPSVLSAPQRRCQILLTLFQPG-LTATMATFSELNGVDDDIASLDISETGREILRYHQL 64 L RR +I L +++ SE + D+ L L Sbjct: 87 GETDALINNARRVKIASQLLSDTPHETSISKLSERYFISSASIVNDLK-IIESWLHPLGL 145 Query: 65 TLTTGYDGSYRVEGTVLNQRLC---LFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 L G++ +EG+ R L + + P + + K+ + G Sbjct: 146 ALVRSQSGTH-IEGSENQVRHAMASLINDVMHHKEPGPLNHSRLDPGSYKALINYFGEED 204 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + ++ LQ + S L + + + + + G Sbjct: 205 VSFVESLLQDMERQLSYPLGEPYYINIFTHTLIMMH----RIAQGKALMMAEESVHQQVD 260 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSML------RVPDPLRDAHQRDRQLR 235 F +AQ + ++R +P DE F+ R + L + + R Sbjct: 261 NRIFSIAQNMVSQIEQRVESTLPSDEVWFIYQYIISSGIVMEERADNQLLRYQFSNGESR 320 Query: 236 QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 + L F +L N+ ++ L + L H+ LNR + I I N L ++ + + Sbjct: 321 RITHALTQIFSDLINIDLRTDKLLHEGLLIHIKPLLNRLKYQIHIRNPLLDDIKSEFIDI 380 Query: 296 VRTTRAALAGFESEYG-VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQ 354 T+ A+ + ++++E G + + F A L E + K+I+++ + Sbjct: 381 YDMTQQAMDEVCQRFQLKPVAEDEIGYLTIHFQAAL--ERQIAHKRILVVCSSGVGTSHL 438 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 ++ ++ + + +S + LII+ T+ L P++Y Sbjct: 439 LKNRILRAFPDWIIVGVVSASNMQRFCQQEEIELIIS--TIHLEEQHIPVVYVSAFFNDD 496 Query: 415 QQEQIRKML 423 +++ + + Sbjct: 497 DIKRVTEKV 505 >UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing protein n=3 Tax=Enterococcus faecalis RepID=C7UBV6_ENTFA Length = 652 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 59/409 (14%), Positives = 142/409 (34%), Gaps = 20/409 (4%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R+ ++ L + S+ V S D+ + I +T+ + + Sbjct: 95 ERQIKMAEYLLLRNKKVSYQLLSDEFLVSRTSISNDLDQIQTVIEGS-SVTIRSD-NNGT 152 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCP--SFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 +V G + + + + QF L S L + I + + Sbjct: 153 KVNGNESEIQKAIKQYAYFIIDKSDLTNSYRVQFPSLLFSFLPKDIIKKV--------SG 204 Query: 133 VNLCSRRLQK-RFESRDIHFLCLYLQYCLLQHHAGITPQF-NPLQRRWAESCLEFQVAQE 190 + + + L L + +L+ G ++ + ES F +A E Sbjct: 205 LLQTNDHFNIDKLSDDHFQSLVLSISIFVLRLQEGFHIEYQDNFLFENVESLKTFFLANE 264 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + + + + ++ + +P ++ +++++ + Sbjct: 265 LVENLELDNSIKLDSNDFEYFNRQLV-AHGFEPRLRDLAIQKEYDAVVRKMIQKMSDSIQ 323 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 V ++ L + HL + RS + + N L EE R Y L TT LAG E E Sbjct: 324 VDLTRDEKLYMNILYHLVSMIYRSKLNVPVSNPLLEEIKREYSVLYSTTWLILAGIEKEL 383 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 + L+D+E + + F + + + + I+++ I +L+ + ++ Sbjct: 384 DIRLTDDEVAFMMIHFQGAIDRLSANRK--ILIVCPTGIGTSELIANRLKRVFSPQDIVE 441 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 +S++ + + L+I+ + L P+ Y ++ +++ Sbjct: 442 VVSLRTLYKRDLNK-IDLVISS--VQLEKIDVPVTYVSPLMSKQDLKKV 487 >UniRef50_B0P5V1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5V1_9FIRM Length = 671 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 72/426 (16%), Positives = 137/426 (32%), Gaps = 16/426 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +RR I + + V + D+ RE LR QL++ + Sbjct: 89 LSPEERRESIYYHMLFSETAIKAEDLASFLRVSTPTVTNDLHSL-REELRVRQLSIASKK 147 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKR-----RGIARNFYD 125 YR+ G R CL L + + T + + R R +A ++ Sbjct: 148 GEGYRLRGCEEEFRACLVEALIQLTNDSHAITRYSLTNRVVRGVCREEHTLRSLALDYLA 207 Query: 126 DTNLQALVNLCSRRLQKRFE---SRDIHFLCLYLQYCLLQHHAG-ITPQFNPLQRRWAES 181 +L AL L + + L LYL + + G P + Sbjct: 208 AVDLDALAGLLDYAREITYHTMPEDGYIRLLLYLAVLVRRACGGNCFSGEKPSGNQ--GE 265 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 E Q+A + + R + E ++ + P + + +L + ++ Sbjct: 266 PREEQLASLLIDRLKTRFHLDLGSGEAAHLSKWLISCNIRFPPKTNDKLAERLSSIVDKM 325 Query: 242 VNHFRELGNVRFYD--EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 + + D L L HL + + I N L + YP + Sbjct: 326 LEVLHSYPSYDMPDFYRDKLKMNLMNHLKLTVKKYQLQIPSPNPLLAQMKVNYPEIFAVA 385 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQL 359 FE G+ L ++E G +A+ A + + N L K+ +++ ++ ++ Sbjct: 386 HQMSQVFEMGTGIPLDEDEIGFIAIHIAANVEECNRLRSKKALIVCNTGQGAAIVLQNRI 445 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 R +S T II+ MP P+ ++ + ++I Sbjct: 446 RNNIPRLEIQGTLSALDVGNTDVLAEVDFIISTVKMP--PLDKPVFQVSPIISAAEIDRI 503 Query: 420 RKMLES 425 + L Sbjct: 504 NRYLNG 509 >UniRef50_C5F6Y5 Predicted protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=C5F6Y5_LACPA Length = 693 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 68/416 (16%), Positives = 136/416 (32%), Gaps = 37/416 (8%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 +R I L L ++ + +GV AS D+ R L QL L Sbjct: 100 EEEERILLICLYLLVSDELLSLVHIYDFSGVSRTTASADLKAATR-FLSTRQLKLKYTRQ 158 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 Y +EG+ L R L + + + + + +L + + + Sbjct: 159 AGYFIEGSELAIRNLLNYLVTQLLKY-------DDGRSSMEQLGKLPTEQVIH------- 204 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 V + FL L + + ++ + + + + EF + + Sbjct: 205 FVREVENARNVTYSDESFSFLMLAVLMNVTRNLSHRVSDHHYFEHQ-ISDTEEFSALRPL 263 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + L E ++ +L D D L ++I+ +V F + + Sbjct: 264 ---MPKAWLTNDSDAE--WLVILLLSANTIRG--DVGVADADLVKAIQTMVAKFEQQTFI 316 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDN-----TLPEEFARLYPRLVRTTRAALAGF 306 + D+ +L HL A+ R + + + + + + + LV T A + Sbjct: 317 KITDQDDFVKRLLAHLRPAIFRVRYGLHLHDIGIGQVMAAD--SRHRFLVDTINAIIEPL 374 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREAQIEQQLRELTL 364 E G + ++E L+A F L + DLH +++ ++ N + Q LR L Sbjct: 375 EKLTGKTIPEDERNLIAFYFDGELEKSADLHVSKERAAVVCTNGLIVSKLMIQNLRRLFP 434 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + S + F L+ + L+ +Q Q+R Sbjct: 435 EISFLSATSAREFEH--FSGDYDLVFTTVPLKTSARQ---YIIHPLLSGDEQVQLR 485 >UniRef50_C6JPW9 Predicted protein n=4 Tax=Fusobacterium RepID=C6JPW9_FUSVA Length = 687 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 66/418 (15%), Positives = 141/418 (33%), Gaps = 12/418 (2%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R I L L L + +D+ +E + +L + + Sbjct: 79 FSKSERLEIIFLFLLISSDGCKADEICSLVDISRSTFKIDMRFIRQEFEKK-ELKVISKA 137 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + + G + R L L++ F + + K I +N+ N+Q Sbjct: 138 NKGLIILGNEIIIRKLLLEKLKKIFEIENK----KLKFFEKISSYEVNIIKNYISPHNIQ 193 Query: 131 ALVNLCSR---RLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 + + L K+ L +YL + + +T + + + +S +F++ Sbjct: 194 TVTQYLEKLKIVLNKKISDEAYQILMIYLLIVIKRLKNNLTLEKKLQNQEFIKSTYDFEI 253 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 + + + E + + + ++ + + L+ E Sbjct: 254 VKSNIFILENNENIKMNELEIIKITEFLLGAHTYNFKYSFYENWIYIEKMADDLIKKVSE 313 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 N+ + L D L HL + R I ++N++ E YP L + AL E Sbjct: 314 KINLNILKDSTLRDGLINHLIPTIYRLKNDIELENSIHREIIEQYPVLYSEVKTALKKIE 373 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 G S+ E+ V F + + E +K+I+++ G ++Q++ EL Sbjct: 374 DFIGKEFSENETSFFVVHFVLSIKRMAEKLEEKKKILIVCGLGYGTSNLLKQEMEEL--F 431 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + IK + L+ II + + P++ + LT + + Sbjct: 432 DVEIKDLVPLNNLKNIDISEIDFIITTTDIKKLEVNIPIVKVNSILTKENITDLLTVG 489 >UniRef50_C5J5A2 PRD activator n=16 Tax=Enterobacteriaceae RepID=C5J5A2_ECOLX Length = 517 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 78/420 (18%), Positives = 151/420 (35%), Gaps = 25/420 (5%) Query: 16 RRCQILLTLFQPGLTAT-MATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 RR +I L T ++ SE + D+ L L+L G++ Sbjct: 96 RRVKIASQLLSETPNETSISKLSERYFISGASIVNDL-RVIESWLAPLGLSLIRSPSGTH 154 Query: 75 RVEGTVLNQRLC---LFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 +EG+ R L + + + + K+ + G + + L Sbjct: 155 -IEGSEGQVRQAMALLINGIINHNEPQGVVYSRLDPGSYKALVHYFGEEEVLFVQSLLLD 213 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + N S L + + + + + + R++ E+ F VA ++ Sbjct: 214 MENELSWSLGEPYYVNIFTHILIMMYRNTHGNALSREED---QTRQYDENI--FNVASQM 268 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDA------HQRDRQLRQSIKRLVNHF 245 ++R +P DE F+ V + Q + R RL+ F Sbjct: 269 IHKIEQRIAHTLPDDEVWFIYQYIISSGVAIDGQKDVSIISHMQASNEARLITWRLITVF 328 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL-A 304 ++ + F ++ L D L H+ +NR + I I N L E+ + R T+ + Sbjct: 329 SDIVDCDFSEDSALYDGLLVHIKPLINRLNYRIHIRNPLLEDIKAELADVWRLTQYVVNQ 388 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 F++ +S++E G + V F A + E + K+++L+ ++ R L Sbjct: 389 VFKTWGENAVSEDEVGYLTVHFQAAM--ERQIARKRVLLVCSTGIGTSHLLKS--RILRA 444 Query: 365 LPL-NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 P I + A L P LII+ T+ LP + P+ Y +++ +M+ Sbjct: 445 FPEWTIVDVISAANLSQVLPDNIELIIS--TINLPTVTMPVAYVTAFFNDADIKRVTEMV 502 >UniRef50_Q3XZH6 Transcriptional antiterminator bglG:Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=9 Tax=Lactobacillales RepID=Q3XZH6_ENTFC Length = 640 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 62/417 (14%), Positives = 139/417 (33%), Gaps = 21/417 (5%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 + + Q R ++ L ++ SE V +++E YH L L + Sbjct: 85 TEMDKKQLRQLLIFHLLVAKDGFSLEELSEKLYVGKRTIRKELTELQS-FFEYHHLQLVS 143 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 ++G +R L LR + P +P+LK + + Sbjct: 144 KTKLGTFLKGDEQEKRQLLVKTLRNMQKEDPQ------SPSLKEFFAKDTLK---VIQHT 194 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 LQ + + + + +++ + L + + + + E +++ Sbjct: 195 LQDVFYENHLE-----QPNGLASVEIHIYFMLERMKQYQKVKLSKDENEVVEHTQAQKLS 249 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 +I PDE ++AL + + A + ++ L+ + Sbjct: 250 SQILAKLATIYPIEFSPDEINYLALRI--ANLFTNSQAATRFQKESSALADHLIEQVEQF 307 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 ++Q L L +HL+ R + + I N L + Y +L + L + Sbjct: 308 LGYSLKEDQLLKQNLRSHLSSTYFRLHYGLQISNPLTKNVFSTYTQLFLVLQLILEDYFE 367 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ--IILLTGNDSEREAQIEQQLRELTLLP 366 + ++ EE+ + + F A + + ++ +L++ +E +L Sbjct: 368 KENFYVPQEETAYLTIHFQAAIERHKHQKSRRYQTVLVSEYSKAMATFLEARLNRELPEL 427 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + K L+ I+A T+P S P+I +T + K + Sbjct: 428 TIMDLVEYKPELKRQDFPSVDFILA--TLPFKHISIPVIEISPMITETDLAYLTKYM 482 >UniRef50_B0MEI2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI2_9FIRM Length = 642 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 69/419 (16%), Positives = 135/419 (32%), Gaps = 38/419 (9%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 + + R I+ L T+ +E V + D+ E L+ H++ L Sbjct: 84 SREERVIIITVLLMISEKVTIEQLAEKLQVSKNTVVQDL-RPAEEFLKKHEVRLIKKSYY 142 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 ++G R LF+ + I D + + Sbjct: 143 GMSLKGEEEQIRNTLFNLYIKTASEGSLNILHILKD------------HAEVDPEAGRNM 190 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQ-------FNPLQRRWAESCLEF 185 + + RF I L + L + G + + F Sbjct: 191 IRRVEAAMGIRFADESIGELESMILASLCRIRCGFHVRGRTLDDADGVCREAILSGLPGF 250 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 QV + D F+ L S R+ + D ++ Q+ ++L+ F Sbjct: 251 QVTKG---------------DLSYFVMLFQSTKRMDGESLENWDEDGRVMQATEQLIRKF 295 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + + Q+ HL A+ R I I N L E+ + + T L G Sbjct: 296 CSDLKISSEIDPEIQRQIMMHLKVAVFRLKNKIKIKNPLMEDIKYSHSFMYELTERLLKG 355 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTL 364 E GV D E + F + L+ +++L+ G + ++Q++ E Sbjct: 356 QEEMLGVVFPDAEIAYTTMYFEVLFQENFSLNLSPEVVLVCGGGTATAVLLKQRISEYFP 415 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K V + II+ T+PL L + +I+ + L + ++++ ++ Sbjct: 416 ELRVRKICRVSDVEEETERNRPDFIIS--TVPLSLRNQQVIHVNPLLNSPDIDRVKNII 472 >UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli RepID=C2BXN0_LISGR Length = 646 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 49/420 (11%), Positives = 142/420 (33%), Gaps = 19/420 (4%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 P S R + L + ++ V I E + + + + + Sbjct: 84 PKNDSIQDRITHVYSRLLNTKGHLKIQDLADELFVSRATMENTIKEIRKRLEKE-GVAIV 142 Query: 68 TGYDGSYRVEGTVLNQR---LCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 + + +++ T +R + + G F + + + + + Sbjct: 143 SNRN-GLKIDATEKMKRHFMSDVISYYWGGVTATNLFKKEELELGI-NMIGDTTNIIDVN 200 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 ++ ++N+ + + L ++L + + ++ A + Sbjct: 201 LLHSITNVLNIFIESTSLQVTEYEYQSLSIHLAIAIERIKKNFYID-----KKIAPANAP 255 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 + A + + + +P E ++ + + + + L S K + Sbjct: 256 SKYATLLIELLEEKFQIQLPDYEREYIDIHILAIEKSSLNDTDGEMLQVLDDSEK--LQQ 313 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + ++ L + L HL A+ R + I N EE + + + Sbjct: 314 IIRSTLGGYSPDEELINSLLVHLNAAVKRLKLEVSIHNPYTEEIKGNFSGAFAISIELAS 373 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 E+ + + L+++E + + ++L +E ++++IL+ + +EQ++R+ Sbjct: 374 AIEAGFAIKLNEDEIAFITLHIQSFLDRE-AQTKREVILVCSSGYGTSKLLEQRIRQTFG 432 Query: 365 LPLNIK-HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 L++K + ++ + + T+P+ + P++ +T ++I L Sbjct: 433 AALHVKQVLGIRDLQKANIQDELII----STIPIEKSNSPILVVSPLMTNADIQKINTFL 488 >UniRef50_D0BM95 Putative uncharacterized protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BM95_9LACT Length = 684 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 55/416 (13%), Positives = 141/416 (33%), Gaps = 33/416 (7%) Query: 14 PQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 +R ++ + + + + + + D+ E + IL+ ++L L D Sbjct: 86 EERIDMLIFYIILCSDYISNSHLQDFLRMSKNSILADLKEV-KVILQKYELQLIYSRDKG 144 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 Y ++G R L R + IT + + Y + L+ Sbjct: 145 YYIDGNSNKIRELL-------ERTIGNLITLVCGRNILRYIF--NECNLIYQEELFFNLL 195 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ-VAQEIG 192 + S + Q F + I + + + L+ + ++ +F+ + + Sbjct: 196 KIYSDKYQLIFIAEKIDTVAILMA----------VINEYSLKESYIKNTEDFEKIIETPL 245 Query: 193 RHWQRRALQPVPP--DEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + P E F+ + D + + + + ++ + Sbjct: 246 LRLLIDIEEKFPNLSKEREFLLSRLAGCVQGDLNINPEPE---IIKIMDEIILQVKVNTG 302 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F + LY HL A R +F + + N L + + Y L + +L E Sbjct: 303 LEFPETFQFRKNLYAHLYPAFYRQIFDVSLKNPLTSQIIKEYDYLFALIKRSLKPLEEAT 362 Query: 311 GVHLSDEESGLVAVIFGAWLM---QENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 +S++E + FG +L +E+ + +++ N + +L+++ + Sbjct: 363 FKKISNDEIAYFTIHFGGYLENIQKESITEKIVAMVICPNGISSSLILRAELKQIFPMIE 422 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 MS + + + +I + ++ + PL + + ++ ++K + Sbjct: 423 F-YTMSFNDYKKNIGIQKVDMIFSTMSIEV---DKPLFIVKTIMNSTEKILLKKKV 474 >UniRef50_C7TGH5 Transcription antiterminator, BglG family / PTS system, IIAB component n=4 Tax=Lactobacillus RepID=C7TGH5_LACRL Length = 689 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 60/421 (14%), Positives = 137/421 (32%), Gaps = 25/421 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 VLS +R+ + L L + + V S D+ + +L + QL + Sbjct: 85 GYVLSNSERQLFLALLLACHKGYLALIHLQDYLQVSQSTISKDLRVLEQRLLNF-QLRIH 143 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 YR+EG+ R + + + + + + ++ + + Sbjct: 144 YDRRSGYRLEGSEDKIRSFMIKLVSKQLFKNHADLLTTCAQLIQQVDVSAKLTQ------ 197 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++ + + F + L + Q+ +S E+++ Sbjct: 198 -----ISKLAHASEIDFVENRFLEFGYIFIFMLARLRIKKDYLPARAQKMNIQSTREYEL 252 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A+ + + + E ++ + L + + + DR + + V F + Sbjct: 253 AESL---LNNEGIHNITATE--YLTTIILCLSIGG--LENMRADRNIFSVTNQFVQRFSD 305 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 + + F D + Q++TH R F I N L E+ Y + A+ FE Sbjct: 306 VSGIVFADNHKVTRQMFTHFRSMYYRLQFGYPITNPLTEQVIENYGEVFTLVAQAIQTFE 365 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQI--ILLTGNDSEREAQIEQQLRELTLL 365 G + D+E + + +++ ++ + +++ N A QL L Sbjct: 366 DILG-KVPDDEIAFLTIHLISFIYTSDNSKNDYVTAVIVCPNGIGSSALAYLQLTSLFPN 424 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAP-YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 +K A A LI + Y L P ++ ++ + + + Sbjct: 425 IKFLKPFRYADLDSHLA--DADLIFSTFYRSELFAKGKPCFIIKPIMSAEEKYNLIQEVN 482 Query: 425 S 425 + Sbjct: 483 T 483 >UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbiobacterium thermophilum RepID=Q67LZ9_SYMTH Length = 634 Score = 151 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 64/403 (15%), Positives = 130/403 (32%), Gaps = 27/403 (6%) Query: 28 GLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCL 87 ++ ++ GV D++ R L L G+ + G + R + Sbjct: 79 DAPRRLSVLADRLGVGKSTVHTDLATAESWASRR-GLALARGHA-GICLRGAEPHWRRAI 136 Query: 88 FHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN-LCSRRLQKRFES 146 + + + + + D LQAL+ L R R Sbjct: 137 VD------------LVGELADEAQLAM----LLEEHPDAAPLQALLRPLVPRVSWGRLGD 180 Query: 147 RDIHF----LCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQP 202 L + + L + AG T ++P Q S + AQ I R + R Sbjct: 181 LLRELGAPELSICVAVMLSRLQAGHTLSYSPDQVSRGLSSPWGREAQAICRALESRFGVR 240 Query: 203 VPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQ 262 +P E ++AL R +P + +++ + ++ Sbjct: 241 IPNTEAAWLALQLEATRAVNPAPGRDIVHPADLELAEQMAVLVETRLGIGLRQDREFLMG 300 Query: 263 LYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLV 322 L HL R ++N L +E YP + + +G+ + + E G + Sbjct: 301 LALHLRPIAERLRRGEAVENPLLDEVQAKYPAACLAAQDVGRALSAIWGLTVPEPEIGYL 360 Query: 323 AVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQT 380 A+ A L +E + +++ + A + ++R L + +S + Sbjct: 361 AIHIAAALEREKLRRRTVPRALIVCSSGVGTSALLVTRIRSLLPEIQPGRVVSAFRVREV 420 Query: 381 GAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 A L++A T +P P++ L ++R+ + Sbjct: 421 LAEDPHDLVVA--TCQVPPCGLPVVRVSPLLGEDDVARVRRTV 461 >UniRef50_C6JP15 Predicted protein n=2 Tax=Fusobacterium RepID=C6JP15_FUSVA Length = 686 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 61/416 (14%), Positives = 130/416 (31%), Gaps = 16/416 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R I+ T+ S GV DI + L+ L L+ Sbjct: 84 FSQDEREKIIINFYLFKKEPTTIEDISIFLGVSAVTLKNDIKRIKK-YLKTFMLNLSNEN 142 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSF----ITSQFTPALKSELKRRGIARNFYDD 126 + + G N R L L + + + IT + K + Sbjct: 143 NKCLTITGDERNIRKLLLDILLKNYDITFKNDEIIITKTYYHGFFIPWKEMDNFFDKTIT 202 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 L+ + K L Y+ L ++ + + + E+ Sbjct: 203 NKAYKLLKNILKENNKNISDEAFKVLFFYILILLNRYQDHEITTIKNM--NFLSNTPEYL 260 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 ++ + E L + F + + Q+ I +L+ Sbjct: 261 AVKKFLTESE------FSEGELLTLTEYFLGSNTFNFDHSFYGNWVQIETFIMQLIKEVS 314 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + G ++ L + L H+ A+ R+ I + + + +F YP ++ A Sbjct: 315 KFGYSGLDKDETLLEGLINHIKPAIYRAKTGIQLSSEIYNDFKESYPLILNQVEEAWKKC 374 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 G+++S+EE +A+ F + + K I+++ G+ + + ++E Sbjct: 375 -DFQGLNMSNEEIAYIAMHFQLAIKRVKKRVFKDILIVCGSGYSTSKFLAESIQE--KFS 431 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 +NI L+T +I L P++ L+ ++ + Sbjct: 432 VNIVDTIPYNMLETYKNVENIDLIITTIANLESTLLPVVTVSPILSKDDVRKLEAL 487 >UniRef50_C9B155 Predicted protein n=2 Tax=Enterococcus casseliflavus RepID=C9B155_ENTCA Length = 767 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 66/417 (15%), Positives = 148/417 (35%), Gaps = 33/417 (7%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R +L L M F++L V + D+ + ++ + + L++ Sbjct: 172 FSEYERIAIMLSYLCTNTGYIGMDHFTQLLSVSRNTIQEDLKK-AKQFVSKYALSIHYDR 230 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y+++G L +++ I + P + + + Sbjct: 231 QSGYQLQGLERRILQLLSDLIKQHSLFRLDDIKGKLAPTIP--------------EEEVV 276 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 L++ + L R+ I +L ++ L + + I + +Q E++V Sbjct: 277 HLIHNMEQLLHLRYSDESIDYLQSAVRMTLQRATSPIASKDEMVQIE-IRKTPEYKVLTI 335 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH-QRDRQLRQSIKRLVNHFRELG 249 + Q + P+ ++ALLF + + D +LR I +V F+ Sbjct: 336 L---LQDTPWSSMSPNYLSWLALLFLTSNIFERKTTQVFDSDSELRCLISEMVTSFQNQT 392 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGID----NTLPEEFARLYPRLVRTTRAALAG 305 + D + ++ HL A R + + + ++L ++ + L + + Sbjct: 393 LIMIEDREAFERRILGHLRPACFRIKYNLSLGMYSLDSLVQD--SNHAILKDLMKELIVP 450 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELT 363 E+ G ++E L++ FG LM + + + +++ N + + L++L Sbjct: 451 TENWLGRAFPNDELALLSYYFGFQLMSPRQIAAQLPRAVVVCANGVMVSKLMRENLKKLF 510 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + SV+ F + L+ + L P D +T QQ +R Sbjct: 511 PELHFLASFSVRDFYK--FGTDYDLVFTTTALNSEL---PQFIIDPIMTYKQQISLR 562 >UniRef50_Q184X1 Transcription antiterminator n=6 Tax=Clostridium difficile RepID=Q184X1_CLOD6 Length = 635 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 56/425 (13%), Positives = 132/425 (31%), Gaps = 22/425 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTAT-MATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 LS QRR +IL L T + ++ V D I + + L L Sbjct: 88 LSVEQRRMEILKYLLLNSNNITSINQLADKYYVSKTSIVNDFKYIEAWI-KEYNLKLN-K 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSE--LKRRGIARNFYDDT 127 ++ G ++ R + + L L + F D+ Sbjct: 146 TLEGTKIIGKEVDIRKSIAKMMD---DLLDENYEQHDISELTRLDSATFSALINLFDIDS 202 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCL--YLQYCLLQHHAGITPQFNPLQRRWAESCLE- 184 + + + +++ L ++ CL + G + + ++ E Sbjct: 203 IIFVETIITELEYNLGYTINQPYYINLITHILICLKRIEEGNQIESQEEREISVDNLDEL 262 Query: 185 -FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR--- 240 ++ + + R + DE +++ + ++ + ++ Sbjct: 263 VYKNVTTLIDKIENRYRVKITKDELMYIYIFLVSSGFSSESNSSYNDESDRLSESEKVSS 322 Query: 241 -LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 ++ + N+ ++ L L H+ LNR + I I N L E + ++ Sbjct: 323 IMIENMSRFLNINLKNDDLLQKSLAYHVRPMLNRLRYDIQIKNPLLGEIQERFSDVLGLC 382 Query: 300 RAALAGFESEYGVH-LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQ 358 + + +S +E +A F A + E ++ K++I++ + + Sbjct: 383 MMTINIMTEYDNLKNISIDEVSYLATYFQAAI--ERNMSSKRVIVVCHTGYGTSQLLAAR 440 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 L+ + + + + + T+ L L I + L + Sbjct: 441 LKREFPEWTIVDIVPMHQLSKRNL---DDVDFVISTVNLDLKDKLHIVVSVLLMENDINN 497 Query: 419 IRKML 423 I+ L Sbjct: 498 IKNAL 502 >UniRef50_Q5WC76 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WC76_BACSK Length = 706 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 60/418 (14%), Positives = 133/418 (31%), Gaps = 23/418 (5%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 A R ++ F T+ + E V DI E+L + L + + Sbjct: 85 AADREAFLVFAFFYAEEKVTVPSICEHLLVSKSTVDKDIQRLRTELLADN-LRIDSLPKE 143 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFR------LCPSFITSQFTPALKSELKRRGIARNFYDD 126 + V G+ +R LF +L+R R L S + F ++ + + Sbjct: 144 GFAVVGSEFAKRRWLFRFLKRACRNRGLDMLKQSEAATFFEDYCCKLVEATALEQTL--- 200 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 A + ++ RF + LY L + G + + Sbjct: 201 ----AWIRTIEQQKNGRFTYETHLEIGLYALLALKRIKMGYLLTEKVMVPEQLDKQ---- 252 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 A + + + + E ++L S + L Q++ ++ V+ Sbjct: 253 -AFALAQTFDFQKPVTELNTEIYVLSLFLSTAKEEQFLFKMEGNWGQIQVAVMDFVHSIT 311 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + + F ++Q +Y H+ R + I+N + + + YP L R A Sbjct: 312 KQTGLPFVNDQEYFSSIYAHIQTMARRLKNELPIENPIADVIVKQYPDLFAACRMAGNEL 371 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 E + + +E + + + + + +++ G+ IE+ L Sbjct: 372 ERTLQLTIPIDEIAYLTMHTCVASERLKRQTLVYRTVIICGHGITNARLIEESLYARFS- 430 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +I+ + + + + + T+PL + P + I+ + Sbjct: 431 --SIEVLGTLSRYEVDVIQKLQVDFVLTTLPLSIKGVPCLQVSPFFKDEDTALIQTTI 486 >UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9W1_9FIRM Length = 515 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 73/421 (17%), Positives = 142/421 (33%), Gaps = 18/421 (4%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S R+ I + L + + V D+ +L +++TL Sbjct: 88 YSPQFRKIYIGMRLILCPQNCRIYELANELYVSRATIHKDLLALAP-MLETYKITLHRKN 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRR--GFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 + VEG N R L + G++ + I P + + Sbjct: 147 NNGLSVEGKERNYRAMLLELMNHDNGYQKFTAMIKDPDFPCTGDFVFPALDYIDDEIKEF 206 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 LQ L + + L L L+L C ++ G + +S ++ Sbjct: 207 LQVLKHSENSYLHTLLCPSLFQVL-LHLFICFIRVREGHYVSLSDPFIEELKSKPFYEET 265 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 +++ + + E ++ + L+ Q + R+ L+ + + Sbjct: 266 KKLIQALEEYYHISFSETEIRYLQVFLISLQSSSDTAKDEQEEA--RELSDLLIAEWEKH 323 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 N F+++ L LY HL A+ R I I+N L E LY +A+ Sbjct: 324 LNYSFHEDTELKSALYAHLCPAITRFRHGISIENPLMYEIKTLYKNTFSIAKASAHILTE 383 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQ----QLRELTL 364 Y +SDEE G A+ L E + +L+ + S +++ Q EL + Sbjct: 384 RYQAPISDEEIGYFALHLAMAL--ERAKKPLRTVLICHDSSSATKLLKRKLMTQFPELDI 441 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + + +++V F LI++ + L P I + L ++ ++ Sbjct: 442 VAVQ-SYLTVHDF----PFHEIDLILSTMELNLD-NDIPFIVINPLLYDCDIAHLKTIIT 495 Query: 425 S 425 S Sbjct: 496 S 496 >UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 Tax=Anaerococcus RepID=C2BGB6_9FIRM Length = 698 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 58/419 (13%), Positives = 135/419 (32%), Gaps = 18/419 (4%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 + R IL L T E+ V + DI + L+ + L + Sbjct: 128 DQIYDKKGREKYILENLLLENKALTFDDLLEILFVSESTLQRDIYSLRNK-LKDYGLDIV 186 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + + G L +R + + F +S ++ + +EL+ + Sbjct: 187 KDDNSYLSISGKELEKRHFILDF----------FFSSIYSNSFINELEDLNLFHKATISQ 236 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 L L++ R I L ++ + + E Sbjct: 237 LLIILLDEI-REYGISVNDYAIQNLVIHFALVIERVKINCLIDNYDKDIAKGEGDEFLDF 295 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A+ + R + +P +E ++ L + ++ + + Q I L+ + + Sbjct: 296 AKSVIRRISKSFAIDLPIEEKKYIYLQLLS-KTKLSSENSIKSFKDYNQVID-LLRYLSK 353 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 N+ D+ + HL NR + I N L ++ Y + F Sbjct: 354 KLNINLLDDNVFMNNFIEHLKALENRVASGLYISNPLTDKIKTQYTSYFDLVVDSFKKFS 413 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + ++D+E + + + L + + ++++ + ++ +++ + Sbjct: 414 IFENMDITDDERSYLVIYILSALERNKFNKKINVLVVCASGFSTGLMLKNRIQNEYTNTI 473 Query: 368 NIKHMSVKAFLQTGAPR--GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 NIK +V + + LII+ + + + P + + L I K +E Sbjct: 474 NIK--NVIGYYEITPKNLDDVDLIISSVDLEGLVIAVPSVKVSVFLDEDDCALIDKEVE 530 >UniRef50_D1AQE8 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQE8_SEBTE Length = 687 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 65/421 (15%), Positives = 144/421 (34%), Gaps = 8/421 (1%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 L V S +R + L + SE V D+ +E+++ Sbjct: 75 ILNDIEVFSQEERLEILKFILCFDKTGLNLTKSSEKLRVSRTTIKKDMKILKKEMIQE-G 133 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 + + YR+EG L L+ L + + + K+ + N Sbjct: 134 FDVAYKNNEGYRLEGEPYKLELYKIGLLKEILILVNT--KDKESSYKKTMSELCDSLFNI 191 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 +++ + + L + + YL + H + + + Sbjct: 192 KGKESIKEFILNIHKNLSLNISDEIFYVIYAYLIILIDNHKNIQSLYTRSSNKSFLLGTK 251 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 EF V ++ + + +P + L +A + + + + IK++VN Sbjct: 252 EFLVIEKEIKKIKELKNAEIPKERILELADFILGITTNEYSSNNLENWIHEEVFIKKMVN 311 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F + + ++ L D L H+ + R I + N + +E ++ R Sbjct: 312 EFNKYIELDITSDEILIDCLIYHMKPVIYRIRNNIRVTNPVFKELIISKDPILEIVRIIT 371 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 E +G+ +EE L+A F A + + + K+I+L+ G +EQ ++E Sbjct: 372 RDIEKMFGIEFPEEELALLAFHFKASIDRNTHQNLKRILLVCGLGYGSSRLLEQSIKENY 431 Query: 364 --LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 + + + +K L+ + LI+ + + P++ + L ++ K Sbjct: 432 NVDIVDVLPYYLLKDALKN--YKNIDLILTTLDI-TEKYKIPVVKINPLLKQEDYLEMAK 488 Query: 422 M 422 Sbjct: 489 Y 489 >UniRef50_B0N368 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N368_9FIRM Length = 619 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 54/386 (13%), Positives = 126/386 (32%), Gaps = 27/386 (6%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R IL + + + S++ +D S + RE L L + Sbjct: 94 ERAYYILGLMLESQEFIKIDDISDILFIDRTSVSRSLKYI-RERLNDFDLKIVQKTGKGL 152 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 ++EG RLC+ ++ + + I +D + Sbjct: 153 KIEGEEFRYRLCMAEYIYHKIGMLSTKIG---------------------EDHEFIDELR 191 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 R +++Q L + F+ + + EF VA+++ + Sbjct: 192 KVIFNDGITMPQRVFQNFIIHIQVQLNRIQRKCYISFHDNEIEKMKMEYEFLVAKDVSKV 251 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQ----SIKRLVNHFRELGN 250 + + +E ++A+ + + QL++ ++++ N +++ N Sbjct: 252 INKYFHIELSVEEQCYLAIHILGKKSNSTSAIESCINDQLKEEIDIIVEKMFNQVKKVFN 311 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F+++ L L H+ NR F N L Y + A + Sbjct: 312 IDFHNDMYLRKALGIHINPMENRLKFNTYSRNPLIYVIKENYTLAYILSMEAWLAIYNNA 371 Query: 311 GVHLSDEESGLVAVIFGAWL-MQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 ++E G +A+ F L ++ ++ +K+++L+ + + + + L I Sbjct: 372 DYINVEDEIGYIAIHFQYALERRKRNIAKKRVLLINEYNVAMSELLSFSILKRYKDSLVI 431 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTM 395 + L II + Sbjct: 432 EKTISAGELSKYHLESYDYIITTVPL 457 >UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G824_9ACTN Length = 470 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 102/278 (36%), Gaps = 6/278 (2%) Query: 150 HFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPL 209 L +++ L++ + + + E++ A++I R +P +E Sbjct: 26 QNLLVHIVIALIRISNDCYVPIEDSRLQRIVATSEYRAAEDIARRIDALTSISLPQEEVA 85 Query: 210 FMALLFSMLR--VPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHL 267 ++A+ + + P + ++ Q + +++ + F ++ L L H+ Sbjct: 86 YIAIHLAGKQTIYQTPDESSLVISDEVWQVVSDMLDRVWRVFRFDFRNDLELRMNLARHI 145 Query: 268 AQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFG 327 R + + + N + ++ YP A YG LS +E G VA+ F Sbjct: 146 QPLSVRLRYNLKLKNPMLDDIKARYPLSFSIAVDASTVIAEAYGAPLSHDEIGYVALAFE 205 Query: 328 AWLMQEN-DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGA 386 L + + +K I+++ + + +E Q R I + L + Sbjct: 206 LALERSKTETVKKNILVICASGAGSARLLEYQCRR--EFGDYIDQIQTCDALGLDKVDFS 263 Query: 387 ALIIAPYTMPLPLFSP-PLIYTDLTLTTHQQEQIRKML 423 + A T+PL P P+ L + E+ R +L Sbjct: 264 TIDYAFTTVPLNRELPVPVREVSCFLDPVEAERTRAVL 301 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 4/71 (5%) Query: 260 CDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDE 317 L H+ AL R + I+++ + R ++ + L E Sbjct: 25 FQNLLVHIVIALIRISNDCYVPIEDSRLQRIVATSE--YRAAEDIARRIDALTSISLPQE 82 Query: 318 ESGLVAVIFGA 328 E +A+ Sbjct: 83 EVAYIAIHLAG 93 >UniRef50_C7T7M7 Transcription antiterminator, BglG family / PTS system, IIAB component n=2 Tax=Lactobacillus rhamnosus RepID=C7T7M7_LACRG Length = 680 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 66/411 (16%), Positives = 138/411 (33%), Gaps = 33/411 (8%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R I L L ++ + +GV S D+ + R QL L Y Sbjct: 89 ERVLLICLYLLVSDEQLSLVHLYDFSGVSRTTTSADLKIVAHFLERR-QLALKYTRQAGY 147 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + G+ R L + + + + + + + E + ++ Sbjct: 148 FIAGSEQIIRNLLNYLVTQLLKYDDGRGSIEQLSTVPPEQ--------------VIHFIH 193 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 + FL L + + ++ + T + + EF + + + Sbjct: 194 KIESVRHVTYSDESFSFLMLAVLMNVTRNLSQRTRDNHYFVHQ-INDTKEFSLLKPL--- 249 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 ++ L E ++ +L + D L +I+ +V+ F + ++ Sbjct: 250 IPKKWLVCDSDAE--WIVMLLLSANTIRG--EVGVADTDLVAAIRTMVSKFEQQTFIKID 305 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPR---LVRTTRAALAGFESEYG 311 D++ ++L HL A+ R + + + + + PR LV T A +A E G Sbjct: 306 DQKDFVNRLLAHLRPAIFRVRYGLHLHDIGIGQVMAADPRHQFLVDTINAIVAPLEKLTG 365 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 + ++E L+A F L + DLH +++ ++ N + Q LR L + Sbjct: 366 KPIPEDERNLIAFYFDGELEKSADLHANKERAAVVCTNGLIVSKLMIQNLRRLFPEISFL 425 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 S + F L+ + L+ +Q Q+R Sbjct: 426 SATSAREFEH--FSGDYDLVFTTVPLKTSARQ---YIIHPLLSEDEQMQLR 471 >UniRef50_A4VZ09 Transcriptional antiterminator n=9 Tax=Lactobacillales RepID=A4VZ09_STRS2 Length = 680 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 57/415 (13%), Positives = 129/415 (31%), Gaps = 20/415 (4%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R+ I L F + + EL V + DI +E+ Q+ L Sbjct: 85 LSQEERQLLIYLYTFIRKEFVSNVHYQELLSVSRNTTLTDIKNV-KELCLDFQVRLEYTR 143 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G ++ + L + + LKS + I Sbjct: 144 AKGYHLIGREEDKHRLALYALSNCLQSSIGVWALDYI--LKSWGEENPIEELKIVSQ--- 198 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 C+ E R +L + + Q G +N + ++ + Sbjct: 199 ---QACNYYKVSALEERLDEYLYFLIFLFIRQARVGNRINWNFEGKGGFVKDFLQRLWKL 255 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + E +++ + ++ ++D +V L Sbjct: 256 LRLKSTSTLELNAATQE--YLS-HLLQGCLEG---ESGEKDDLFYHLTVEIVEEMERLSL 309 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F + + L HL A R + N+ E + L + AL E Sbjct: 310 ITFEHRSEMIEGLQRHLIPAYYRLTSRLVNVNSYTETIKEEHADLFYLVKKALRPLEEHL 369 Query: 311 GVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 G + D E + FG ++ + + + +++ N +++ LR+L Sbjct: 370 GFTIPDSEVSYFVIHFGGYIEAGQQRSYRYRALVVCPNGVSSSLIVKENLRQLFPNIYFA 429 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 S++ + + ++ + + L P +T++ ++++ ++ Sbjct: 430 DTHSLQDW-KMLDMTDYDMVFGTIKLNIEL---PFFLVSQLMTSNHKKELFHLVN 480 >UniRef50_UPI0001694F32 transcriptional antiterminator, BglG family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694F32 Length = 652 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 65/424 (15%), Positives = 141/424 (33%), Gaps = 18/424 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R QILL L T +E G + D+ + R + +++ L L Sbjct: 89 SQEERNTQILLILLNRSDYVTANELAEWLGTSRNTILRDLLKGERMLQQWN-LDLERKQY 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSF-----------ITSQFTPALKSELKRRGIA 120 ++V+G L +RL L + + F I L L G Sbjct: 148 KGFKVKGPELYKRLLLEYLAQNLLDASDMFRMIQGVLRREPIPPDIKKILAPHLLPYGEM 207 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 N + + +L+ + +L +++ L + + Q + + + Sbjct: 208 ENVFQ--AVHSLIKMLEEKLNLLLTDQEMIGLLFRFSIAIRRIRDNERIQIEAISVKAIK 265 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDP-LRDAHQRDRQLRQSIK 239 +++ E + P +E +++++ + R P L L + Sbjct: 266 QSASYKIVLEGLTDLGLQMGIKFPEEEAVYVSMQLIVGREELPGLPSTEYGMPDLANVAR 325 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 RL+ + F + L + L +HL+ L ++ + N + ++ R Y L Sbjct: 326 RLIKLVSKKLGYPFEKDPDLFEYLISHLSSKLLKARLGVLDPNPITDQVIRSYGTLFIYV 385 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQL 359 + A S+ + L D + + + F + + + + + G I++ + Sbjct: 386 KEACEEIFSDINLLLVDFDVAYLVIHFQESYERLQQNVKYKALFVCGTGRGTARLIKRLM 445 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 + SV + L+I+ + LP P++ + T + Sbjct: 446 ENRIPQLEVAGYCSVMEVSKLLEQHSVDLVISVLPIELP---VPVVRVNPIPTKDDIIAV 502 Query: 420 RKML 423 L Sbjct: 503 LNCL 506 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 95/316 (30%), Gaps = 29/316 (9%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R +LL + G + +E V DI E+ R L L L + Sbjct: 5 RAKDMLLRMIVSGHPVRIKHLAEEFHVSTRTIKYDI-ESIRLWLNEQHLCLQSHTKRGIW 63 Query: 76 VEGTVLNQRLC--LFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 +E + + L R + T L L R + L + Sbjct: 64 IECSEEKKNKLRELLDSGERSAIFPSQ--EERNTQILLILLNRSD----YVTANELAEWL 117 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV--AQEI 191 + + + L Q+ G + L +R L + A ++ Sbjct: 118 GTSRNTILRDLLKGERMLQQWNLDLERKQY-KGFKVKGPELYKRLLLEYLAQNLLDASDM 176 Query: 192 GRHWQRRA-LQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 R Q +P+PPD +A + + Q++ L+ E N Sbjct: 177 FRMIQGVLRREPIPPDIKKILAPHLL----------PYGEMENVFQAVHSLIKMLEEKLN 226 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 + D++ + L + A+ R I I+ + + + L Sbjct: 227 LLLTDQEMI--GLLFRFSIAIRRIRDNERIQIEAISVKAIKQS--ASYKIVLEGLTDLGL 282 Query: 309 EYGVHLSDEESGLVAV 324 + G+ +EE+ V++ Sbjct: 283 QMGIKFPEEEAVYVSM 298 >UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6G9_9CLOT Length = 673 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 74/422 (17%), Positives = 154/422 (36%), Gaps = 30/422 (7%) Query: 11 LSAPQRRCQILLTLFQPGLTA-TMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + R LL F T+ +E V DI T REIL + L L Sbjct: 106 FNVKDERILYLLDFFTEYNDVITIDQLAEQISVGRTTIVNDIKST-REILNEYNLDLIKK 164 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR--NFYDDT 127 + ++G ++RL L +++ + + S++ + + L ++ + + + Sbjct: 165 QNFGMWLKGNEFDKRLLLINYIYKDSKNDLKN--SKYVNGVDARLLKQLKTKILRLFKED 222 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 N A + ++ Y+ +++ G + S E+ + Sbjct: 223 NFYATNQIFEETIK-------------YILVQIVRIKNGNEIVEYDKRFDLLGSYDEYNL 269 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP---DPLRDAHQRDRQLRQSIKRLVNH 244 +Q+I + + E L++ L + + Q + ++++ Sbjct: 270 SQKIKVIVEENFDTTLNEYETLYLTLPLVSGNAAPISKFMSNKPQLRENISDLMEKIFKE 329 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + D Q L D L HL LNR LF I + N L E+ Y + + Sbjct: 330 IYIRMGIIISD-QTLRDNLGYHLEFTLNRLLFNIKLKNLLLEDMKENYVLPYNLAKISAD 388 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQ---ENDLHEKQIILLTGNDSEREAQIEQQLRE 361 E+ Y + + ++E G +A+ FG++L + N L + I+ TG + I ++R+ Sbjct: 389 VIENVYNLVMPEDEIGYIAIHFGSYLEKNIISNTLQKVAIVCSTGLGA--TNLITIRIRK 446 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 + + I S+ + + L+ + + S L + + + +I K Sbjct: 447 IIGENVEIDTFSIFDIDKVNLSQ-YDLVFTTSDIDINSNSV-LKIDTILDESKLRNKIEK 504 Query: 422 ML 423 M+ Sbjct: 505 MI 506 >UniRef50_B6FXG1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FXG1_9CLOT Length = 641 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 49/416 (11%), Positives = 144/416 (34%), Gaps = 26/416 (6%) Query: 10 VLSAPQRRCQIL-LTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 +++P+ R + + L + + + + D+ + +EIL ++ + + Sbjct: 86 EINSPEDRVIFIAINLLIGNSKV--EELANMLSISKNTVVSDLKK-AKEILNNLRINVIS 142 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 +EG + R + + + A +L + I + Sbjct: 143 KAYVGTCIEGDEEDVRYAFI------------NLYYKISNADNYKLLKMIIDDFDSVKND 190 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 ++ ++ +L + L + + YC ++ ++ + + + Sbjct: 191 IEERIHKVENKLSLEYSDTSFKELIIIIMYCFMRMGEYSNFNYSE---EYIHEKEQEEEF 247 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQ-LRQSIKRLVNHFRE 247 + I + A + E ++ F +V + D + R++ + Sbjct: 248 EAIQYAF---ADKTEDKKEICYLMKWFKSAKVMSFINDKSDVKMDGNKYLAMRIIEDMEK 304 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 + + ++ + + H + A+ R I+N L E+ + + T + +E Sbjct: 305 YTGIDYSNDFDFVNSVVMHFSVAMYRMQNNFKIENPLKEDIKMRLGIIYQITEDVMKKYE 364 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQE-NDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 SE GV D+E +A+ FGA ++ ++ + + +++ + + ++ + Sbjct: 365 SEIGVEFPDDEVSYMAMHFGAAFERKTQEIFDTKALIVCNSGLATAGLLSARMEVMLPQI 424 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + + + +II+ T+P+ + + L +++K+ Sbjct: 425 QVEGVCRLNNLEEELKNKDVDIIIS--TVPIRNTDIEYVEVNPMLNIDDVLKLKKL 478 >UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7A6_THEAS Length = 646 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 70/408 (17%), Positives = 133/408 (32%), Gaps = 17/408 (4%) Query: 19 QILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEG 78 ++L L TMA E G S + L H++ L + +EG Sbjct: 92 RVLRFLLPRRCPVTMARVMEATGAGRGAISAALDR-AEAWLAGHRIRLVRRPNVGLWIEG 150 Query: 79 TVLNQRLCL--FHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLC 136 RL L WL G F+ + + + + L+A V Sbjct: 151 EEGALRLALSRLFWLSLGSHGFDDFLRGRVSME-DPIFHPGEM-------SFLEARVRRA 202 Query: 137 SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQ 196 Q R + L ++L + + G + + E E + A+ + R + Sbjct: 203 LEMAQVRLTGEAVLGLTVHLAVSIKRVRTGGALE--ICRDEGLEGRREMEAARLMARWVE 260 Query: 197 RRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDE 256 +PP E ++A+ R + R + L++HF + R ++ Sbjct: 261 EGLGVTMPPGEVEYLAMHVMSSR-RLGCPGEKELARDAEAVARILLDHFARSLDRRLQED 319 Query: 257 QGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSD 316 L L HL+ ++NR N + + R + A + + G++L + Sbjct: 320 PQLLADLSGHLSTSINRLRCGFPSSNPILGQIKRAFCYSFEVGLEGAARVQEDMGINLPE 379 Query: 317 EESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVK 375 +E G V + A L + E + + +E ++ I S++ Sbjct: 380 DEVGYVVLHVQAALERLRGMEEEVRAAVFCPQGVGILRLMEAKVSSAFPGVRVIGAGSLE 439 Query: 376 AFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 L+ L+I+ +P L I L + + +L Sbjct: 440 D-LKVVLEDRVRLVISTVPLPAYL-DCQHIVVTPLLRDEEMRSVEDLL 485 >UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Clostridium difficile RepID=Q184U4_CLOD6 Length = 514 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 53/420 (12%), Positives = 131/420 (31%), Gaps = 11/420 (2%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S R+ IL LF + V D+ + L+ ++TL Sbjct: 86 AYSPEDRKRYILSKLFIKNSKFRIRDICNELHVSRATVHKDLV-VIQNFLQNFKVTLVRK 144 Query: 70 YDGSYRVEGTVLNQRLCLFHW--LRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + +EG + R +F + + + + S+ + + YD Sbjct: 145 TNNGVYLEGKEKDIRKAIFELATVNKSYTELKEILFSKSNECKDTPSTKIFKELFNYDFE 204 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 L + + + +++ C+ + + R F+ Sbjct: 205 KLSQITLHTLQVEKSNLSDEYYINFLIHIAICIKRISIKRYINLSEGFFRELLEHEYFEK 264 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSML----RVPDPLRDAHQRDRQLRQSIKRLVN 243 ++ + + +E ++ L L + L + + + Sbjct: 265 SKILCANLSEAFDVEFIDEEVCYILLHIEGLLKSIKKTTTLEPLKNEEITEYNLSEAIAV 324 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 H+ + N+ D+ L L HL L+R + I N + + R +P + + + Sbjct: 325 HWGSILNLNLKDDLILIKSLANHLKSVLHRINYGFTITNPILNDIKRTFPYTYKAAKESN 384 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 + ++D+E G +A+ + + + +I + + Q+L Sbjct: 385 TVIKQLMNYEVNDDEIGYLALYLISAIDRSKSPLNTILICHCSDGV--SNLLVQKLSFEF 442 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +K + + + T LI+ + + LI + L+ + ++ ++ Sbjct: 443 NQINIVKSIPLSSISFTNF-DDVDLILTTAPVDF-EHNAELININALLSKNDISRLSTII 500 >UniRef50_C7XUI8 Multidomain protein n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XUI8_9LACO Length = 690 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 58/413 (14%), Positives = 129/413 (31%), Gaps = 32/413 (7%) Query: 17 RCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRV 76 R +L + T ++ ++ + + D+ + + + + + + Sbjct: 107 RVLLLQFVLISRPTTSLNQLVKIFNISKNTVLKDLENIKKALPKNI---ILSNEKNGKTL 163 Query: 77 EGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLC 136 G + R +F R +L S + +NF +L Sbjct: 164 TGNEIALRRWVFENFRELL-------------SLISPYMKLDNDKNFSRQLSL------L 204 Query: 137 SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQ 196 R F + L ++++ + H + + L + A + + Sbjct: 205 ERITGNSFTDDSLALLNNFMKWSSERIHNRPSCELQLTNDGDDNYSLTYTWAVSLLNDIK 264 Query: 197 RRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY-D 255 E F+A + + + LR+ +++ F E+ V Sbjct: 265 -----IFSSAEAHFLA-EIVNTQAFQHISADNAMIPPLREISAKIIKRFNEIACVSLPPS 318 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 + L L HL R + I N L + +Y + A+ LS Sbjct: 319 DNTLNKNLTIHLVSTYYRVKYKINYQNPLVNKIKIVYKETFEIVKLAIQPLNDFVHQKLS 378 Query: 316 DEESGLVAVIFGAWLMQENDLHEKQ--IILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 D+E L+ V F L +L + ++++ + + QLR I + Sbjct: 379 DDEIALITVYFSGALRNSQELSRSKSGVLVICSSGIGTSELLISQLRSHYPDVNFIGPYN 438 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA 426 + + L+++ +P+ P+I + + + +QI L+ A Sbjct: 439 TFEYENI-SYSNIKLVLSTIHLPIMQEGIPVITVPVIPSNYDWQQIEGTLQKA 490 >UniRef50_Q04DX9 Transcriptional antiterminator with PTS system component IIA-like domain n=2 Tax=Oenococcus oeni RepID=Q04DX9_OENOB Length = 668 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 73/422 (17%), Positives = 146/422 (34%), Gaps = 45/422 (10%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S QR + ++ L ++ V + A D + IL+ +QL+L+ Sbjct: 93 FSGKQR-IETIIWLLINREKVSLTLIETKFDVSRNTADKDFKKI-SCILKDYQLSLSKN- 149 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 G + + G + +R +W+ F S+ P L S L +R N+ Sbjct: 150 SGGHTINGPEIQKR----NWIYEQF--------SKGNPILFSLLAKR-----VESVQNIN 192 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 L+ R F L YL + + + NP+ R + + + Sbjct: 193 PLLKEFERMTGNFFTDDAFICLSAYLDWYIDRIQ-------NPVNRLENTNVIP---SNL 242 Query: 191 IGRHWQRRALQP---VPPDEPLFM--ALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 I W ++ L V E ++ + S D + +++ K+++ F Sbjct: 243 IALEWAQKFLFKNHVVNLGEASYLINTIHSSQF---DKANKEYGGIQEILPIAKKIIFRF 299 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + V + L L THL R + I + + + Y +L TR ++ Sbjct: 300 NRIAGVNLRLD-SLQVNLSTHLLATYYRIKYGISYKHPDLDLIKQKYEQLFSFTRFSVRP 358 Query: 306 FESEYGVHLSDEESGLVAVIFGA---WLMQENDLHEKQ-IILLTGNDSEREAQIEQQLRE 361 FE + D+E L+A+ FG + EN +K ++++ + ++QQL + Sbjct: 359 FEEFVKKDIPDDELALIALYFGGEIKAIEAENLKKQKNDVMIVCSSGIGTSRILKQQLED 418 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 K + ++ + LI++ + ++ + I Sbjct: 419 RFPEVAFSKPYNTLSYENSSL-EDIKLIVSTIKIK-NRKGINVLKVSAIPGKQDWKNIES 476 Query: 422 ML 423 L Sbjct: 477 AL 478 >UniRef50_B0MGK7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MGK7_9FIRM Length = 507 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 65/419 (15%), Positives = 146/419 (34%), Gaps = 12/419 (2%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 +A +R ILL L + + + + L +TL T Sbjct: 86 QTYTAKERNDLILLILLHENDYVKTQSLAIDLNTSTQTIRNSLHQLQN-FLENDDITLIT 144 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT- 127 ++G +++R L L R L +F KS + + Y+DT Sbjct: 145 KRSEGVILKGKEISKRHLLISILLRNIPL-DNFFDWMKNKKYKSCAFINLLIQWDYEDTL 203 Query: 128 -NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + ++ + + ++ L + +H + + + L+ E + Sbjct: 204 SVIYDFLDPLISKKRLNVSDKEFQEFLFLLCIFIKRH-SLADEKGDELKLSVDIPNPEQE 262 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSM--LRVPDPLRDAHQRDRQLRQSIKRLVNH 244 + + I + + + E + + ++ R + + +QL + +L+ Sbjct: 263 LYKSIKHLLEHKFHIKLYDTELNYFNWMINLYTGRTHYHVANDSSILKQL-DLVTQLIAR 321 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 E + +++ L + L H+ AL R + + N L ++ + +P+L + + Sbjct: 322 VEERFGFPYSEDENLAENLMLHINMALERIRSGMNVSNPLNDDIYQSHPKLYDIVKQSFI 381 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 + V + D+E G + + F A + +++++ + + +L Sbjct: 382 EVFNHTSVPVPDDEIGYIVIYFIASMEYL-TKQSIEVLVVCASGMGSSKMLRSRLEREFA 440 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K +S+ R LII+ T+PL L I L +E+ RK + Sbjct: 441 EIGVEKIISLHKLSDEDLSR-YDLIIS--TVPLDLADDKYICVSPLLNDRDKEETRKRI 496 >UniRef50_B0A8M3 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8M3_9CLOT Length = 643 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 56/417 (13%), Positives = 139/417 (33%), Gaps = 34/417 (8%) Query: 11 LSAPQRRCQILLTLFQPGL-TATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++P++R +++ + + D+ + RE L+ + + + Sbjct: 88 FNSPKKRMAYVISRLMNDENPVLTEDLAFEMSIGRTTLVGDLKKI-REALKKYNIEIVGK 146 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + +++G ++ RL + L + + +K EL++ Sbjct: 147 TNTGLKLQGEEIDLRLFVLENLYEEI-----YKDHELDYDVKEELEK------------- 188 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 +L+ + I FL + + + H + + V+ Sbjct: 189 ----IFSDLKLEGSTRKQIIKFLTVLIDRLVNGH----SIAELNETYEDLIYTDQINVSN 240 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRD--AHQRDRQLRQSIKRLVNHFRE 247 I + +P +E +FM L +R P + + ++ + ++ + Sbjct: 241 NISDRIENIFGVKIPDNERVFMTLPIVGMRTPMDIDRVKNIEITEEVIDLVLDIIKLIKL 300 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 ++ L D+ H++ LNR + I I N + +E Y + E Sbjct: 301 EMDITITPGN-LLDEFTYHISFMLNRLKYGIKIKNPVLDEIKEKYMVPYKLAELTKMLIE 359 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTLL 365 +S +E G +AV F ++ + + K I ++ G I QLR++ + Sbjct: 360 DRTKKKVSKDELGFLAVYFSVFISENSYERNKLCSIAIICGTGKITARLIAAQLRKIVDI 419 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 ++ S + + L+++ +P + ++ + +I Sbjct: 420 DTKLEMFSDSQVNKELLDQ-FDLVLSTIKFECDTVTPIIYLKEIFDENQLKNKIESA 475 >UniRef50_C8Q416 Transcriptional antiterminator, BglG n=1 Tax=Pantoea sp. At-9b RepID=C8Q416_9ENTR Length = 505 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 66/406 (16%), Positives = 143/406 (35%), Gaps = 26/406 (6%) Query: 30 TATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCL-- 87 +++ +E + D+ + I ++ L ++ + G++ + GT N R+ L Sbjct: 105 PLSISALAEKYFISRSSIVEDLKKIEVWIAKF-SLAISKNHSGTF-ISGTDYNIRMALKE 162 Query: 88 --FHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFE 145 H + +++ S I L +E + + N L+ L LQ Sbjct: 163 IITHSVLSNYQMTDSRIDRFSRVQLIAEFGQENV-------ANCMNLIALIEEELQGSIS 215 Query: 146 SRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES--CLEFQVAQEIGRHWQRRALQPV 203 L +L L ++ P N ++ + E+++A+ + Sbjct: 216 EPYYTNLFSHLLVTLRRNL---HPGRNMAEQTFFIRYDNREWRIAENAILWLENEYQTRF 272 Query: 204 PPDEPLFMALLFSMLRVPD---PLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLC 260 P E ++ + D + D + LVN ++ F + GL Sbjct: 273 PAIEVNYIYQYIISSGMHPVTVAETDNNHHDCTAMEYAGLLVNRLSASLDIDFSRDAGLK 332 Query: 261 DQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS-DEES 319 L +H+ LNR ++ I I N L EE + ++ + + E + L D+E Sbjct: 333 KALASHIKPMLNRLVYGIVIHNPLLEEIRNEFNQVFTAVKQTASAIHQEQHLALPSDDEI 392 Query: 320 GLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQ 379 + + L + +K++IL+ + + ++ I + + Sbjct: 393 AWLTIYIQNALEKTKA--KKRVILVCSSGIGTSQLLSSRINRAFPEWEIIDIVPGARLKK 450 Query: 380 TGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 T + LII+ T+ L P+ Y + + ++ + L + Sbjct: 451 TLQGQPCDLIIS--TIRLDDIELPVAYVSALFSRNDIARVVECLGT 494 >UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Q3_9FIRM Length = 655 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 64/408 (15%), Positives = 141/408 (34%), Gaps = 29/408 (7%) Query: 21 LLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTV 80 L+ T T + + I++ R L+ + L + + Sbjct: 104 LILKSTKNNTLTTKQLASQLYLSVPTTLKVINDC-RSWLKLFNIELNVVRNKGLELAYNE 162 Query: 81 LNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRL 140 ++ RL L H++ + + L I R + Sbjct: 163 VSYRLALKHFI---LKFDTETNVEESILFFMPGLDLDAIRRGIM----------ETEKEW 209 Query: 141 QKRFESRDIHFLCLY--LQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRR 198 F + + +Y L Q G +F+ + + E+ A+ I + Sbjct: 210 SFEFAEESFNEVLVYASLAIYQNQQKNGRKLKFSDEELEMLQKYNEYSFAEAIFKKLGAH 269 Query: 199 ALQPVPPDEPLFMALLFSMLRV------PDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 +P +E F+++ ++ D + D +L++ ++++++ + NV Sbjct: 270 FNMTLPTEEKAFLSIQILCSKLIDSGYSADSGEVLREYDNKLQEFVRKIISVVSNVLNVD 329 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 ++ L L H+ L R + G N L Y + R FE + + Sbjct: 330 LTHDEALVHGLLIHMRPTLFRLRYERGHTNGLTNYIKTEYKKTFRVAWLISVLFEEYFDL 389 Query: 313 HLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 +S++E G + + + L + EN + + +L++ + + ++ L ++K Sbjct: 390 KVSEDELGYIVLYIQSALERNENPV---RTMLVSASGMGINQMLCDKICRSFSLIHSVKV 446 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 +SV F + LI+ T L L P ++ D L+ ++I Sbjct: 447 VSVHDF-KIEKVEDVDLILT--TRELGLHDPRIVEIDDFLSDASIQKI 491 >UniRef50_D1AJW2 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AJW2_SEBTE Length = 688 Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 56/413 (13%), Positives = 131/413 (31%), Gaps = 9/413 (2%) Query: 14 PQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 + R +IL LF + ++ V D EI + + + Sbjct: 84 QKERTEILKLLFCFSRDINLTKAADYLKVSRTTIKSDFEILKNEI-KAVNFNIKYRQNKG 142 Query: 74 YRVEGTVLNQRLCLFHWLRRGFR-LCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 + + G+ + R + S F + ++ ++ + Sbjct: 143 FYISGSRKHLRSFKLETFSKFISIYIKELYLSNFDKIIYELFQKNIPEKS---GQQINNF 199 Query: 133 VNLCSRRLQKRFES---RDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++L F + ++ L L + ++ + + ES E+++ + Sbjct: 200 IRELEKKLSLNFSNNSYEILYSLILCFFVNDKNNSISKQSDYDSINNFFLESTKEYEIIK 259 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + + + + + + ++ L+ +F + Sbjct: 260 NTSKEFSGLIGIKFSKHRITEITDYILGISLCNFDISLVNNWINVEFLVQSLIANFNKYL 319 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + ++ L + L H+ L R I ++NT E + + A+ E Sbjct: 320 EIDISGDKTLFNCLLYHIKPTLYRINKKIKLENTAFRELIINQDPTLEIVKNAVNDMEKA 379 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 + ++EE L+A F A + + ++ K++IL+ G +EQ L+E L I Sbjct: 380 LNIEFTEEELALLAYHFKASIERNTYVYPKRVILVCGLGYGSSRLLEQNLKEHYNL-DII 438 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + + +I + P+I L E+I K Sbjct: 439 DVLPYHQLEEALKNYNNIELIFTTINIKNNYGIPVIKISPLLKKEDIEEIEKY 491 >UniRef50_C4FXZ4 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FXZ4_9FIRM Length = 683 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 58/413 (14%), Positives = 134/413 (32%), Gaps = 27/413 (6%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R I+L L + +L + + D+ + RE L+ ++L Y Sbjct: 86 ERLDMIVLYLVLYPDYISNYHLQDLLRMSKNSVVADLKDI-REFLKNQSISLQYTRSEGY 144 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 +EGT R L + + RL + R D + + + Sbjct: 145 YLEGTGSQLRQLLERTIEKLMRLESGRFILDYVL---------KECRIATKDAAIFSHIR 195 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 S + Q F ++ + L + + + E + + Sbjct: 196 TLSEKYQLTFIFENVKIVSLVMAIL-------NEIEIEGDYQVKQEDYRNIKATALLKLV 248 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + P E ++ L + L D + Q + ++ + + F Sbjct: 249 EELEEEYPKLTKERDYI-LSRLAGCLQGNL--DLNPDPTVVQIMDEIIKQVKANTGLEFP 305 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 L+ HL + R LF I + N L + R Y L R +L E G L Sbjct: 306 MGIHFRKNLFAHLYPSYYRLLFNISLHNPLTHQIKREYRSLYELIRRSLKPLEEMTGKPL 365 Query: 315 SDEESGLVAVIFGAWLM---QENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 S +E + FG +L + + + + +++ N ++ +L ++ ++ Sbjct: 366 SSDEIAYFTIHFGGYLQAKVKRREAKDLRAMIVCPNGVSTSLILQSELEKIFP---RMEF 422 Query: 372 MSV-KAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ ++ +T + ++ + +T+ ++ +++ + Sbjct: 423 QAISRSHFKTVDNMERDDVQVIFSTTHLESQDKVFLVKPLMTSIEKILLKRRV 475 >UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMM5_SEBTE Length = 655 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 60/423 (14%), Positives = 141/423 (33%), Gaps = 24/423 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTA-TMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 +S RR +IL A ++ SE + D+ I + + L L Sbjct: 91 MSTEYRRQKILTEFLSNSPKAYSIQQLSEKYYISRASIVNDLKYIEDRI-KQYDLRLE-R 148 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF--YDDT 127 + G+ +N R + + +S L + F + Sbjct: 149 NKNGTMLTGSEMNIRKAILGIINELMTANHENKNG----LRESRLNDENLYELFGQFGRE 204 Query: 128 NLQALVNLCSRRLQK-RFESRDIHFLCL--YLQYCLLQHHAGITPQFNPLQRRWAE-SCL 183 ++A+ + QK + +I+++ + ++ + + G N ++R + Sbjct: 205 EVEAVAKILKDTEQKLNYTMGEIYYINMITHILILIKRLRNGNILYENKMRRDIRKTDKR 264 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP------DPLRDAHQRDRQLRQS 237 + ++QE+ VP +E F+ + D + + Sbjct: 265 IYTISQEMSGKITETFKIEVPEEETYFIYQYLISSGMEIINAGTDTSELLLDTSPVIMEI 324 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 + ++ E+ + + ++ L + L HL +NR + I I N + E+ + + + Sbjct: 325 AEEIIRKISEIVDFKLTPDKQLYESLILHLKAMMNRLKYNISIKNPILEDIKKEFSAIYG 384 Query: 298 TTRAA-LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIE 356 L E +S +E G + F A + Q ++ +K+++++ + + Sbjct: 385 LVGLVTLDTLEKYNIRAISPDEIGYLTFYFQAAVEQ--NMKQKRVLVVCSSGVGSSHLLR 442 Query: 357 QQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQ 416 ++R +S + LII+ T+ + P+ Y Sbjct: 443 GRIRHSFPEWDIADVISTGRLKAGYDLKDIDLIIS--TINISGIDMPIAYVTALFNEADV 500 Query: 417 EQI 419 + Sbjct: 501 RNV 503 >UniRef50_C6D7L7 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7L7_PAESJ Length = 687 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 158/433 (36%), Gaps = 30/433 (6%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + +++ S +R+ +L L + + T + V + D+ + + + R+ Sbjct: 78 LVSVSEEIEFSPEERQIYLLCLLLESEEPVKLFTLAHEFKVTIPTVANDLDDLDQWVQRF 137 Query: 62 HQLTLTTGYDGSYRVE--GTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGI 119 +T Y +E G + R + +R F ++ + ++EL + Sbjct: 138 ---EVTLTRRRGYGIELTGQEEHLREMIRQIIR------DRFEDTELISS-RNELPAHSL 187 Query: 120 ARNFYD---DTNLQALVNLC---SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNP 173 R + ++A+ + R L + L L + AG T + + Sbjct: 188 DRRLLAIVGQSEMEAVEKILWSWEEYGGSRLSESAYTDLLIRLSIALRRIRAGKTVEASS 247 Query: 174 LQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQ 233 ++ + + A + + PP E ++ L ++ D L D Sbjct: 248 VE-----ALRQESDAVYLTERLAALTERTFPPSETAYIGRLLRSVQS-DDLSVLPADDLV 301 Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 L +++ L+ + + + ++ L D L+ HL AL R I N L ++ + Y Sbjct: 302 LTDTVRSLIEYAQHAMGADYNKDRSLRDGLFLHLKDALQRLNEGTNIRNPLLDQIKKDYA 361 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSERE 352 L R A + + DEE G + + FGA L + L + + IL+ + Sbjct: 362 SLFNVVRKAANRV--FTDMVVPDEEVGFLVMHFGASLERLKQLRQNVRAILVCSSGIGSS 419 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLT 412 + Q+R LP V + + + +I T+ LPL I LT Sbjct: 420 KLL--QIRLQKELPEIHIVDRVSWYEASRTEKDKYDLIIS-TVDLPLNGEQYIKVSPLLT 476 Query: 413 THQQEQIRKMLES 425 + +++R +++ Sbjct: 477 QAETDRLRVFVQT 489 >UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotransferase n=2 Tax=Selenomonas RepID=C4V3X4_9FIRM Length = 644 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 127/366 (34%), Gaps = 25/366 (6%) Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 + + + R+E R +L + L + + Sbjct: 146 YNIHIVQYKTEGLRIEAAEGTLRSFFVDYLHEV-------QDKKLCHILFERITYDQMEE 198 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 N++ L + H L + + + G + + + E Sbjct: 199 ILSQAGNVRRL----------QLTDSARHDLAVQTALSIQRSLTGHGIECSSSMAQKLED 248 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMA-LLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 E+ A+EI +P E ++ L + ++ D + +++ +++ Sbjct: 249 TFEYSAAKEILNKILNSIGVDIPYSEVFYLTQCLLTGKKLLDAGSGVNDE--HVKELVEK 306 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 ++ + + F ++ L D L HL A+ R F + I N L + YP + Sbjct: 307 VLVDVDKKFGLDFTADEYLKDGLALHLRIAIARVNFHVNIRNELLSSVKQDYPLAFQIAV 366 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE---KQIILLTGNDSEREAQIEQ 357 A + ++ E G +A+ F A + + + E K + ++ ++ Sbjct: 367 YAAKLVRDIDHIEFNENEIGYIALHFCAAMSRNSIAEEEQPKNVYVVCSAGLGVSVLMKA 426 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 +L+E +++ + L A II+ T+PLP S +I + L T E Sbjct: 427 KLKEHFRSSIHVIDILPAYKLTEKMQEEADYIIS--TVPLPSNSSKIIRVNHMLRTDDIE 484 Query: 418 QIRKML 423 +IR++L Sbjct: 485 KIRRIL 490 >UniRef50_C3RP75 Predicted protein n=2 Tax=Bacteria RepID=C3RP75_9MOLU Length = 699 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 58/421 (13%), Positives = 139/421 (33%), Gaps = 11/421 (2%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 +S +R+C IL++++ T F++ V DI +E + ++ Sbjct: 83 YVYAISPFERKCYILVSMWCCSEPLTSQYFADEMNVSKSSIDKDILSIRQEYEG-YDFSI 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 +EG + R C F + + F+ Q+TP + I R +D Sbjct: 142 NVKTGKGSYIEGDERDIRSCFFRVIEKNIDF-NKFMHFQYTPI---TFIEKNIYRMVFDK 197 Query: 127 --TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 + ++N +K+ +C++L L + G + Sbjct: 198 YWKIIIKVMNDFESHSEKKLTYLSYKDICIHLAVSLTRIELGYDIILHQDYLIEISKTEG 257 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 + AQ I + + E + +L + R R ++ L Sbjct: 258 YHDAQFICSQIMQALNIKMSQSEVAIITILLNSARYTTLKRYVIYDWANIQMIATTLAFK 317 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 E NV F ++ L + L HL + + + + N + Y + + Sbjct: 318 VGEKLNVNFSRDEELINSLTLHLGPTVFKLQNQVPVVNPSLTVIKKNYHEVFIALLETID 377 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ-IILLTGNDSEREAQIEQQLRELT 363 + + +++ + + F A L ++N + ++++ + + +++ + Sbjct: 378 ELCYKELKGIKEDDIAFLTLHFCAALERKNRFKDVYNVVIVCVHGFGTASLMKEMICSRF 437 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + K ++ + L II+ + + ++ ++ L I + Sbjct: 438 KNIIVKKTVTEERILNIDL-SNIDFIISSIDLQIM--QCLVVKVNVILKESDYRLIENAM 494 Query: 424 E 424 E Sbjct: 495 E 495 >UniRef50_UPI0001BC4864 transcriptional antiterminator, BglG n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4864 Length = 698 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 60/413 (14%), Positives = 131/413 (31%), Gaps = 7/413 (1%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R + LF + + +L G+ + D RE + + Sbjct: 83 FSQDERLEVLTNMLFFSEKKFQIEEYQDLVGISESTFKKDWK-LLREKFDDLDIKII-NR 140 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 +E N R L + + + I T + + ++D L+ Sbjct: 141 KYYTALEADEENIRNNLLKNIVKYKINSNNLI---LTNKIINMFIDNYFKEINFND--LE 195 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 L+ SR+L + + L L + N + +S E+++ Sbjct: 196 NLLEEISRKLNITMSDDAYNIIKFNLAIALKRIEQSPLDIKNIKNIEFLKSTEEYKLVSR 255 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + + + E L M + ++ + I +L+ E Sbjct: 256 VLEDFNSSFRKKSNLSEILNMTEYLLGSHSYNFKYSFYENWIHIESIIDKLIKSIGEDLE 315 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 V F + L + + H+ + R I ++NT+ E P++ + + + E+ Sbjct: 316 VNFQKDSELFEGVLNHIKPMIYRIRKGIKLENTITREIIEESPKIFLSLKKNIGILENFI 375 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 + D+E + V F L + + I++ +E +L++ + + Sbjct: 376 KCKVDDDELSYLCVFFKLALKKHYPNSIPRAIIVCSFGYGISRVLEARLKDKFNISIIET 435 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K + LII ++ S P++ L E ++K Sbjct: 436 LPQNKLTEEKIIEDEIDLIITTTSLENANLSVPVLKVSPLLGAEDIELLKKYG 488 >UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_9MOLU Length = 613 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 47/392 (11%), Positives = 112/392 (28%), Gaps = 35/392 (8%) Query: 31 ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHW 90 + + + + E RE L LT+ T +EG +N+R + H+ Sbjct: 98 LKIDDLCDELYLSRTQLKQSLKEL-REYLHDFDLTIATKAYYGMYLEGDEINKRRAIAHF 156 Query: 91 LRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIH 150 ++ +V + Sbjct: 157 EEYQMDFD--------------------------ILQRIRDIVISSIANADYVISDDVLD 190 Query: 151 FLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLF 210 L +L + + + E+ + I + +E + Sbjct: 191 NLVAHLYIAYYRVMKKEYANIDSEWLEEIKEEKEYSLGCAIMELMNKIMAMEYRIEEVAY 250 Query: 211 MALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQA 270 + + + ++++ +K ++ ++ N+ F + L L HL Sbjct: 251 LTMHLCGKNSKQ--LSNNYINQEILDIVKEMLMIIEKVANIPFQADLNLQLALSLHLIPL 308 Query: 271 LNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWL 330 + R + + N L +E A + LS++E A+ L Sbjct: 309 VKRIQYGTFMHNPLKDEIKSKLIMAYELAVKACVVINQRFNCTLSEDEIAYFALHINLSL 368 Query: 331 MQEN-DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAF--LQTGAPRGAA 387 Q+ + H I+++ + +E +E I+H+ V + L+ + Sbjct: 369 EQKKYNFHRNNILVVCSSGVGSARLLEYFFKE--NFNDYIEHLEVCSLHELENISLTKFD 426 Query: 388 LIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 I + + + P+ + + +I Sbjct: 427 CIFTTVPLAI-KVNIPIFLINNLINQRDTIKI 457 >UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P4U6_9CLOT Length = 640 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 66/416 (15%), Positives = 141/416 (33%), Gaps = 22/416 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S +R I + L T T+ ++ V + D++ + Y+ +TL Sbjct: 83 EYSRDERAVVIAMMLILTDKT-TIEQLADQMEVSKNTLVEDLNSVEA-LFEYYGITLERK 140 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + G R +F I + T L + Sbjct: 141 SYYGLTISGDEEKIRNMVF------------NIYLKITKQKTINLDEIIKEYTVIKEEIP 188 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++ + ++ + L + L + G + R E FQ+ + Sbjct: 189 EEIIYKIEDNERIKYSDDSVKELKNMILITLNRAFDGFYMGADTGYLRGREKPDNFQIIE 248 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLF-SMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 EI + + V + L+M +L + ++ + DR++ + + L+ F + Sbjct: 249 EILKREE----IQVTEGDILYMIMLLNASKKIKGISLEDTIEDRKIMMATQSLIQEFCRI 304 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 + Q + Q+ HL A+ R I I+N L E+ + T+ L +E+ Sbjct: 305 TKIDMKIGQDISTQIMMHLKVAIYRLKNHIEIENPLMEDIKYSSLFVYEITKKILREYEA 364 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + V + E + F + +++ +I++ + ++Q+L + Sbjct: 365 MFDVVFPETEIAYTTMYFETLFQENYNMNFTVNVIVVCNSGLSTAVLLKQRLHMIVPELN 424 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I V ++ II+ T+PL + +I + L IR+ L Sbjct: 425 VISTCRVSDVIKEAENINPDFIIS--TVPLKMNQYKVIEVNPLLNAEDVNVIRRNL 478 >UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFS9_9FIRM Length = 643 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 61/430 (14%), Positives = 139/430 (32%), Gaps = 23/430 (5%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 ++ + P + R+ +LL L Q +M + ++ V D++E + + Sbjct: 76 LLSDIRPICSDAPENRKYHVLLKLLQAPSYLSMESIADTLYVSKGTVVNDVNEIIPFVEK 135 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 LT+ RV G R+ + + RL + + ++ P + Sbjct: 136 -QGLTMEKKAKYGVRVLGKESRIRIAECAVISKLVRLQGNGLLTKLVPFFEE-------- 186 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 D + +++ F + + L + + G + Sbjct: 187 ---TDLQEIHTILHDMEDDYGFTFADSSYAEMMISLAITVERVRNGNVCCPTEGELNGYR 243 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 ++ +A + R ++ + E ++ + ++ + + +R K Sbjct: 244 QKNQWSMAGHMARKLEQEFHIVMDEGEQAYITMNLMGAKLQNRPMENKAVISGVRDIQK- 302 Query: 241 LVNHFRELGNVRFYDE----QGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 ++ + F+++ Q L + LY HL NR + +DN + + Sbjct: 303 -LDEIMKAAGDVFHEDILGDQLLRNTLYMHLEGMFNRLNHQMHLDNPIKQMVKDELAYEF 361 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ---IILLTGNDSEREA 353 ++G L D+E +A+ GA + +++ G Sbjct: 362 EIATYIAGLIAEQFGTGLGDDEICDIALYLGASFERRKISDVLVAPTVVIACGTGMGTSL 421 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 E +L+ + + + V + +I+ T+PL L +I L Sbjct: 422 FFEARLKRVFPDITIRRVLPVSRIREVLEQETLDCVIS--TVPLALDGINVIQVSPVLND 479 Query: 414 HQQEQIRKML 423 E +RK L Sbjct: 480 KDIEVLRKAL 489 >UniRef50_D2ELR0 BglG family transcriptional antiterminator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR0_PEDAC Length = 508 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 65/421 (15%), Positives = 156/421 (37%), Gaps = 22/421 (5%) Query: 10 VLSAPQRRCQILLTLFQPG-LTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S +RR ++LL L + T E + + + S DI+ +++ + L + Sbjct: 89 AYSPIERRKEVLLKLLFKSPEKIGINTLFENFYISESVVSTDIAILKQQLNKKGVLLI-- 146 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 D + RV+G R + L + + P L + + + Y + Sbjct: 147 NRDRTLRVQGNESTIRKLIIR-LVNKWEVDDYSSIGTEIPNLAKRDRDFVVGQMDYIEHK 205 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYL-QYCLLQHHAGITPQFNPLQRRWAESCLEFQ- 186 L++ + + + LC+ + +Y + +++ E+ + Sbjct: 206 LRS-------PISFPYNVNLFYHLCILIKRYKSKNIKFEFGEPISTVEKEMLENNQKLSA 258 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 VA I +PP E ++ + R+ +D + L + + + ++ Sbjct: 259 VAGHIVDTLGDYISLKMPPIEKYYIFQYLNSARLISGSKDKELKFINLTRLLLKNISEIL 318 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG- 305 ++ G+ + L H+ R + I I N + E+ YP + ++T A+ Sbjct: 319 KIT----IQGDGIEEDLSLHVEPMFKRIINGIEIKNPILEDIKLEYPNIFQSTEIAMKKI 374 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 F Y ++SD+E G VA+ ++ Q H + +++ + ++ ++ + Sbjct: 375 FREYYSSNVSDDEIGFVAIYIAKFIEQHG--HNMKALIMCSSGIGTSELLKVKIEKELPN 432 Query: 366 PLNIKHMSVKAFLQTGAP--RGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S + + + R LI+ + P++ + T + ++ K++ Sbjct: 433 LVIEDVISFRMYEKNKEKWNRKVDLILTTIATNEKVVDKPIVLVNAMFTKIDKIRVEKLI 492 Query: 424 E 424 E Sbjct: 493 E 493 >UniRef50_C5EW03 Phosphoenolpyruvate-dependent sugar phosphotransferase system n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW03_9FIRM Length = 670 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 142/432 (32%), Gaps = 20/432 (4%) Query: 7 PPSVLSAPQRRCQILLTLFQ---PGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 L R +L PG T SE V S ++ G + L + Sbjct: 77 DTQELGGQDDRKYYMLRRILCTGPGHVLTETRLSEELFVSRSSISRELDAIG-QWLGNYN 135 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 L + + ++G ++R + S Q + + G Sbjct: 136 LQIEKRRNHGISLKGKEFDKRRAIAELFFTKEADAGSDYARQVPDLSGYQKEMLGTIIPD 195 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 D ++++ + +R RD L L++ L + G T F+ ++ Sbjct: 196 TDTASIKSFIRALEKRHDSIQTHRDYVTLFLHIALSLYRSKNGCTVDFSETDDFILKAAS 255 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALL--FSMLRVP---DPLRDAHQRDRQLRQSI 238 +EI R +Q + E ++ L FS + D +R + + + Sbjct: 256 ADVYREEIDRCFQDKMGYAPKESERDYIFLYVIFSGIFRNAGMDYMRSSILESARFGSFV 315 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 + + + + L + L HL+ + R + I N L E YP + Sbjct: 316 HEFLEMVSSVLGINIPQDGHLYENLKYHLSDMICRMKIGMTIRNPLLHEIKDKYPSVFGA 375 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQ 358 + A FE +G+ ++D E +A Q N + ++ I ++ Sbjct: 376 SWAFSILFEKYFGLMVNDNEIAFIATYLLTAREQLN-YYTVTACIVCNYGVSVAQLICEK 434 Query: 359 LRELTLLPLNIKHMSVKAFLQ-----TGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 L+ NI V A+ + G ++I+ PL ++ LT Sbjct: 435 LKYRFP---NIHVTDVLAYEKFRQLCQGGDGNWDMVISTIG-PLEERQT-VVCVSPILTE 489 Query: 414 HQQEQIRKMLES 425 ++ I K++++ Sbjct: 490 EDEKSIEKLVKT 501 >UniRef50_B6FYB2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYB2_9CLOT Length = 631 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 57/416 (13%), Positives = 131/416 (31%), Gaps = 19/416 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++ +R I+ L + E V D+ + + I Y L L Sbjct: 79 PQTSHERCIWIIQELLFRNKEINLIQLQERVFVSGYSIDNDLKKIRKIIENYPSLKLI-R 137 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 R+EG +++R + L L +D + Sbjct: 138 SKNHIRLEGEEIDKRKLYKYLLTEETHGN------------FMNLNSIADFWTDFDLLAI 185 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + + + + + ++ + + + R E+ V+ Sbjct: 186 KDIFEEVCEKYDYKIRETTFPMIMMHAGVAIERIINHNYLTSDIDDR--LVESTEYHVSY 243 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 E + + DE +LL D + + ++ +++ I RL+ E Sbjct: 244 EFFERVSKLLDIEIVDDEVKRFSLLLLGKSSGDYRKSNNNKE-DVKRLIDRLIEQIAEYF 302 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 V F + L L TH+ + R + + N +E R YP + + E Sbjct: 303 GVDFSKDWDLKVGLETHIRSLIERQRNKVDVTNLYLKEIKRKYPLVFEMAIHSAKVIEKF 362 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 G + + E +A+ GA + + + + + +++ ++ ++L + + Sbjct: 363 TGYVIDEPEIEFLALHLGAAYERIDSVQKYRAVVIMPHNQMLSKPCIEKLN--SRFGDRM 420 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLF-SPPLIYTDLTLTTHQQEQIRKMLE 424 + + + F + T+ + P I L L + +I ++L Sbjct: 421 EVVKMFTFFEESQVMEYEPNFIITTLQIKHNLDVPTIQISLFLNYEDESRIFQLLN 476 >UniRef50_Q04I39 Transcriptional regulator, BglG family protein n=39 Tax=Streptococcus RepID=Q04I39_STRP2 Length = 676 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 62/426 (14%), Positives = 129/426 (30%), Gaps = 33/426 (7%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + VL R I L F + + + V + DI + I+ + L Sbjct: 76 SDELVLPKSTRLALIYLYTFCRLDFISNNHYQDFLKVSKNTTLSDIQSLRK-IMLDNDLE 134 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 L Y + G+ N+ F + + Sbjct: 135 LGYSRAKGYTLHGSEWNKHRLAFQMVSELLESSIGIWDLDYV----------------LS 178 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 +L ++ ++ +E + + L+ CL + ++R L Sbjct: 179 SWGYSLTYDLINQVVKDYYEKLQLVPIVNQLKVCLFGLVFILCRYQRDVERVCLSETLVS 238 Query: 186 QVAQEIGRHWQ------RRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK 239 V Q+I D+ ++ +L S + Q + Sbjct: 239 PVIQDITTILLDTVVDLGIIDTVFSEDDYRYITVLLSSCF----EGEVDVAPVYFNQLTE 294 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 +++ ++ + F +GL + L HL A R F + N YP L Sbjct: 295 AIISRMEDISLLHFKQREGLRENLRRHLIPAYYRLKFGLPSSNEYVLHVKEHYPDLFELV 354 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQ 357 + +L + D E+ + FG +L + + L +K + ++ N +++ Sbjct: 355 KDSLMPLMDAIDNPIPDSETAYFVIHFGGYLKKADTLPQKCYKAAIICPNGVSSSLMLKE 414 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 L L I + LQ A ++ + + P + +T Q Sbjct: 415 NLLALFPQIEFIGTSKIDD-LQVKASSDYDMVFSTIKVETE---KPNYLVSVMMTEEQAI 470 Query: 418 QIRKML 423 Q+ +++ Sbjct: 471 QLVELV 476 >UniRef50_C3RJ67 Transcription antiterminator bglG n=3 Tax=Bacteria RepID=C3RJ67_9MOLU Length = 635 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 60/417 (14%), Positives = 132/417 (31%), Gaps = 17/417 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++ +R I+ L + + V DI + + I Y L L Sbjct: 79 PQTSQERCIYIIQELLFKSHEINLIALQDQVFVSGYSIDNDIKKIRKMINDYPSLKLV-R 137 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 +EG ++R L + + S N +D + Sbjct: 138 SKNYISLEGNETDKRKLYKQLLTAETQGNFMNLNSIAGLW------------NSFDLLEV 185 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++ + + + ++ + + + + + ES E+Q++ Sbjct: 186 KDILEEICEKYDYQIHEMTFPMIMIHAGVAIERIINHNYIKNQTISEK-LESSREYQISY 244 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRD--RQLRQSIKRLVNHFRE 247 + + DE + ALL R D +D + + ++ ++ +E Sbjct: 245 DFFTQVSTMINIELVTDEVILFALLLMGKRANDYRKDIIKEKLAVDVEHLVEAVIVEVKE 304 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 ++ F ++ L L HL L R + + N +E R YP + A Sbjct: 305 YFDIDFSKDKDLKVGLAMHLQSLLERQKNNVQVTNVYLQEIKRKYPLVFEMAVRAGEVLA 364 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 ++++ E +A+ GA + N L + I++ N+ +L+ + Sbjct: 365 ETCEDNINENELAFLALHLGAAYDRVNSLKRYRAIMIIPNNQMLSKMCRDKLKIRFEERM 424 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 I LII + L + P + L + + ++ + L Sbjct: 425 MIVQSYGFFEESMVKEEEPDLIITTVPLKHNL-NIPTVQVTLFINYEDESKVFQTLN 480 >UniRef50_C2H0N6 Transcriptional antiterminator n=8 Tax=Enterococcus faecalis RepID=C2H0N6_ENTFA Length = 680 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 62/418 (14%), Positives = 149/418 (35%), Gaps = 35/418 (8%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 VL+ +R+ I++TL ++ + V DI T I R + LT+ Sbjct: 86 VLTDSERQALIVMTLIANIDYISLDHLVDAVDVSKTTVMEDIKRTEPFI-RNYSLTIRYN 144 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 Y++ G+ L ++R P + E+ RR +A++ + + Sbjct: 145 RMNGYQLVGSEHRILQLLSDLVKRY-------------PIFRREMIRRKLAQD-VSEEEI 190 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 L++ + L + + +L ++ + + + EF++ Sbjct: 191 VHLIHNMEQMLHLSYSDESVDYLQTSARFLVSRGI--KMSDKHAFFPDDVTDTPEFRMLM 248 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH-QRDRQLRQSIKRLVNHFREL 248 + + + LLF + + + D++LR+ I ++V +F+ Sbjct: 249 ILVHETGWSLSKSYME----WFTLLFLTSNIFESKTTQNYDSDQELRKLISQMVENFQNQ 304 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGID----NTLPEEFARLYPRLVRTTRAALA 304 + D + ++ +HL A R + + + ++L ++ + L+ + + Sbjct: 305 TLILIDDREDFERRILSHLRPACFRIRYNLSLGVYSIDSLIKD--SNHAILIDLMKELII 362 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLREL 362 E+ ++E L++ FG L N L ++ +++ N + + +L Sbjct: 363 PIENWLNKAFPNDELDLLSYYFGYQLSNHNKLNKQRQRAVVVCTNGVMVSKLVRANMEKL 422 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + +SV+ F + L+ + + + +T QQ +R Sbjct: 423 FPEIHFLASLSVRDFYK--FEADYDLVFTTTPLKSSMLQ---FMIEPIMTYQQQISLR 475 >UniRef50_B4U065 Transcriptional regulator, BglG family n=5 Tax=Lactobacillales RepID=B4U065_STREM Length = 680 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 62/417 (14%), Positives = 120/417 (28%), Gaps = 22/417 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R I L F + + + + V + A DI R+ L L L Sbjct: 85 LSQAERINLIYLYTFCRRDFVSNSHYQDFLKVSKNTALTDIKAL-RQKLADVDLELRYTR 143 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G L++ R + + + S + + ++ + Sbjct: 144 ASGYTLVGDELDKH-------RLALAMIATLLKSPIGLWALDYILASWHYQVSFEALEKR 196 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + ++ + C Q Q + + + E Sbjct: 197 VSHFYQTFQMSPILDRLQACLYAFIFILCRYQRRVDRVKQRPVVVSEQLDQLTAL-LVSE 255 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I + R DE F LL + D +V+ + + Sbjct: 256 IMQQLSLRYQL-FEADEAYFQLLLAGCFEGEGTVSDDFFES-----LTAAIVDQMQGVAL 309 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F L + L HL A R + + DN Y L + +L E Sbjct: 310 LSFSQSDQLKEDLKRHLIPAYYRLRYGLPSDNDYTLRVKDSYSELFDLVKQSLEPLAKEL 369 Query: 311 GVHLSDEESGLVAVIFGAWLMQEN---DLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + D E + FG +L Q+ + +++ N I++ L+ L Sbjct: 370 DSPIPDSEIAYFVLHFGGYLKQQGKDFHRQAYRAVIVCPNGVSSSLMIKEHLKLLFPDIA 429 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + +S L L+ + + P + +T Q Q+ ++ Sbjct: 430 F-RGLSRLDQLGQLDESCYDLVFSTIRLET---DKPFYLVPMIMTDEQAFQLVSLVN 482 >UniRef50_C5EFX5 Transcriptional antiterminator of lichenan operon n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFX5_9FIRM Length = 632 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 53/416 (12%), Positives = 131/416 (31%), Gaps = 25/416 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S R +L L + + V S + +ILR ++L++ + Sbjct: 87 SGQARSEYLLAYLLFRREYVKIEQLCDFIYVSKTTLSHYLKSVE-DILRRYRLSIERRPN 145 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ G + R + + FI + + + + Sbjct: 146 YGIKIRGEEFDMRRLISDY----------FIKRHCLEGVD--ISHQEEEMAALARQVRKL 193 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + N + FE+ + + + AG + + + E QE+ Sbjct: 194 MANYEVHLSEISFENFVDYTYVAW-----KRMKAGYYLKMD-RENLPEIGVKEQAFIQEL 247 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR----LVNHFRE 247 + DE ++ L + R+ + + + + + R ++ Sbjct: 248 LGILAKEKGISCTQDEENYLLLYLAGKRMIGNI-VENDSNFVIHEQTDRLALEMIRLVDH 306 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 ++ F + L HL R + I + N + +E Y + + + + + Sbjct: 307 DFHMDFLKNFEMRMTLNQHLVPFDVRMRYDIPLKNPMLQEIKEKYSLAYQMSGVSCSVLK 366 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 Y + ++E G A+IF L + + I+++ ++ + + L Sbjct: 367 EYYHREIPEDEVGYFALIFELALEKGDLERRLDILVVCSTGKGTSRLLKYKYEQEFSEFL 426 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 N ++ L++ I + S P++ + L T +++ +L Sbjct: 427 NSIYVCDLIGLESFDLSLVDYIFTTVPI-TMKVSVPIVEVGMFLGTEDIQRVTDVL 481 >UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_9MOLU Length = 628 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 67/413 (16%), Positives = 140/413 (33%), Gaps = 33/413 (7%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL TL + V S D+ R +L +QL + + Sbjct: 96 RITYILSTLLSDNHFVKADDLASQMYVSRSSVSSDLKIVKR-VLEKYQLKIEHKPNYGMI 154 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 V G ++R C+ L+ +L I + + + +V Sbjct: 155 VVGLEKDKRDCII------------------KEQLELQLGHSTIKKEWL--ATISDIVVD 194 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + + R + L L++ + + GI + R++ E +A++I Sbjct: 195 SLMKAKYRISDVVLQNLVLHICVSIQRMQHGIYIDNPQMARQYGH---EHVIAKKILDEL 251 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + +E F+A+ R + +++ + ++ + ++ FY Sbjct: 252 ASIYHFIITENEISFLAIHLLGKRSY---EENDLISKEIDYFVNGMLEEIKIKTDIDFYG 308 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 + L L HL L R + + NT+ ++ YP A + + LS Sbjct: 309 DVELKISLALHLVPLLVRLESQMQLQNTMIQDIQANYPLAYDVAVIAASYISEQKHYQLS 368 Query: 316 DEESGLVAVIFGAWL-MQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSV 374 +E G +AV F L +EN ++ K+++++ I+ L I + + Sbjct: 369 SDEVGYLAVHFSLSLSKKENKINPKKVLIICNARRGDYLMIQHTF--LKEFNEMISDLEI 426 Query: 375 KAFLQTGAPR--GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 L+ I A + + PL + + + ++I+ L+ Sbjct: 427 INALEIPQYNLDDYDCIFATF-LNHPLIPKRALRINFFIDQKDIQRIKNSLQG 478 >UniRef50_B0NXI9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NXI9_9CLOT Length = 650 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 65/419 (15%), Positives = 137/419 (32%), Gaps = 20/419 (4%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 L+ + RR IL + T+ + S+ V DI+ + I Sbjct: 83 DNLSEDEKYTPEYRRLWILKKVLIDCEIITLESVSKEFLVSKTSLYQDIAVINKSIESQS 142 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWL-RRGFRLCPSFITSQFTPALKSELKRRGIAR 121 + L G + G + + ++L S T + + ++ + Sbjct: 143 DVKLEVGEC-GICILGEESEIQNAVNNYLLSESKEEMFSDFTHKLGNFFELDVIKAVSDL 201 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 D L + L + + + L + L + H + + Sbjct: 202 ILNDFEELTEV-------LSEYYLKSLLVTLIMQSSRLLKKKHMN---EETEISYNNIRH 251 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 + VA I + + ++ ++ RV ++ + +++ + Sbjct: 252 METYIVANSIAEQLKYQLHITYSNNDMEYLCRQLYAHRVTHHVKHMRTDYEE---TVRDV 308 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 + E+ + ++ L + L HL + R I I N + + + YP L T Sbjct: 309 IKRMSEIQKLDLTRDKKLYESLLYHLPPMILRLQNNIQIVNPMLDNIKQEYPELFTTMWY 368 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRE 361 AL E Y V L+++E L+ + F L Q + I+++ I ++++ Sbjct: 369 ALTQIELRYQVTLTEDEVSLILLHFQVALDQFEQVG--NIVVVCTYGVSSSQLILSRVKQ 426 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + NI + K + + LII+ + P S + + LT I Sbjct: 427 ILPAKDNITVTNTKKLKEIDLSK-VDLIISSVDIEDPEIS--YVKVNPLLTKDDYANIL 482 >UniRef50_D1AH38 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH38_SEBTE Length = 683 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 57/417 (13%), Positives = 125/417 (29%), Gaps = 21/417 (5%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 + + R + + +F T +++ + V DI E E + + + D Sbjct: 85 SKEERIRYIKLIFLSEETVNISSLARSLDVSRTTVRADIKEITAEFSSDNVIVI----DN 140 Query: 73 SYRVEGTVLNQRLCLFHWLRRGF-RLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + + N R + + + + L N Sbjct: 141 KLYL--SEKNIRNLILKYFHEDLIQFYYYNKETMDKNMLLDYFYPYISDLNITYLKQFID 198 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + + + F +L L + + + E+ + E Sbjct: 199 DILIKLKNNANNFHEYTFTYLILLYIRVKNNKKIQKVENES-----FLYNTGEYHIIAEE 253 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + + +E L + + + IK L+N + Sbjct: 254 LEKLETKIKIKFSKEERLLLCDYILGFLSYSYNTSIFEYWIKTEVIIKNLINKVNTHTQI 313 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 ++ L L +H+ + R + +++ + E YP L + AL E G Sbjct: 314 NISGDEELLSSLLSHIKPTIYRLKNNLAVEDDIYIEAVEAYPELFNIIKNALFELEELIG 373 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT--LLPLNI 369 + D E L + F A L + + K++IL+ G + Q+++ + I Sbjct: 374 KKIPDSEIALFTLHFLASLERNKENKRKKVILICGGGYGTSMLVAGQIKQNYNLEIIDTI 433 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSP---PLIYTDLTLTTHQQEQIRKML 423 +M + + L+I + PLI T + Q+++ + L Sbjct: 434 SYMQFLDYDISN----IDLVITTLKLRKDAKRHIEIPLIKISPFFTYNDQKKLSRFL 486 >UniRef50_D1AIK5 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AIK5_SEBTE Length = 698 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 60/423 (14%), Positives = 135/423 (31%), Gaps = 7/423 (1%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 M+ L +L +R + LTL + + V D E RE+ + Sbjct: 78 MLDFLKELEILLPYERMEILKLTLALDPNGLNINRLYKKLEVSRTTLKKDFDEVKRELFQ 137 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 L + G ++ G + +L + +L + K L Sbjct: 138 S-GLLVEQVKKGGLQISGEYEDIEKFRIKFLMKYLQLYLDNRPGK--SFEKIILNMMKDI 194 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNP--LQRRW 178 + ++ + ++ L+ + Y+ +L + +G P + R+ Sbjct: 195 FRLNNPGLVKKFIKNVAKNLEIIISDEPFGIIASYMLIVILNNKSGKENLQEPAVTEERF 254 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 + E++ + + + L +A L D ++ ++ Sbjct: 255 LKETDEYRSIIKHISEIEMAEEIKFKNTQILKLADLVLGSNSFHIENDFYESWIEIDLLA 314 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 K+L+N+ + +++ L L HL + R + I N + E Sbjct: 315 KKLINNMNQKIEADISNDEILFRCLIHHLKPTIYRIKKGVRIVNPIFENMKIKKDDFYYY 374 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQ 358 + A E G + ++E L+ + F A + + H K+I+L+ + Q Sbjct: 375 VKDAAKELEKMLGQEIPEDELFLLIIHFKASIERNRPKHVKKILLVCSLGYGTATLLAQN 434 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPL--FSPPLIYTDLTLTTHQQ 416 +R+ + + +G LII + + P++ + T Sbjct: 435 IRDTYEVEIMEILPYYALRESIKEYKGIDLIITTVDIKESKKPKNVPVVKINPIFTLDDI 494 Query: 417 EQI 419 + + Sbjct: 495 KIL 497 >UniRef50_C5ERF8 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERF8_9FIRM Length = 633 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 130/385 (33%), Gaps = 24/385 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + P+R I L TM ++ V + D+ + R +L + L + Sbjct: 94 TGPERVEYIAGKLLALDYYITMEELRQILYVSRSTLNQDMRQVRR-LLELYGLKVVHASH 152 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 R++GT R C+ R + TP +R + +Q Sbjct: 153 KGIRLQGTETALRRCMAELFFRN------EGKWEKTPGTGPGEERI---------SQIQH 197 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF-QVAQE 190 ++ + L + + L L + + +F+ + +F +A Sbjct: 198 ILKSRADALCVSYPEAVVRELALQIYIAAQRCRFRKEVEFDSS----LQVSRQFMDMAVS 253 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 IG + +P E MA + + + D + I+R+ E Sbjct: 254 IGDGLRETMGISMPDIEIHNMACML---QFRSLEEETGPEDDRFDGVIRRMFQRIEEKFG 310 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 +RF ++ L L HL + R I I+N + + YP V A+ E E Sbjct: 311 LRFSGQEQLAHYLKLHLPRMAQRCRNRILIENPVLNDTFCNYPLAVDVANVAVQVLEQEL 370 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 + ++ E G +AV F ++ + K +IL+ +L+ L +N Sbjct: 371 DIKVNSNEFGYLAVYFNMCIVTYGERQNKTLILVCPGSRAESVMYFTELQALFGNYVNTL 430 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTM 395 L++ G +I++ + Sbjct: 431 LTCRVDELKSMKFTGNEVIVSTVPL 455 >UniRef50_B0MGN0 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGN0_9FIRM Length = 679 Score = 141 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 69/421 (16%), Positives = 135/421 (32%), Gaps = 20/421 (4%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R+ + + L T A SE + D+++ L+ H + L + Sbjct: 88 LSKNERKTILAMLLLNQEKYVTAAWISEYISTSRNTVISDLNDLKDWFLK-HNMKLVSQV 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y VE + + R + L F LK + +Q Sbjct: 147 QKGYIVEASEGDIRSGMLKLLELNLDEEKYGAMGAFHVFGHLLLKEIQYQGRY---ETIQ 203 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE--FQVA 188 ++ R L + G T + Q W + L + ++ Sbjct: 204 KVLREEELRHDCFLSDFSFSVAVYELLILAERVKKGKTLE-QERQPDWENASLSSKYPLS 262 Query: 189 QEIGRHWQRRALQPVPPDEP---LFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 + + +P E +F S L+ D + + I R+++ F Sbjct: 263 RAVLDRLAEEFSLDIPAAEAENFVFCLRRKSYLKSGTNNVDQLVIPVLIGEVIYRIISRF 322 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 R + FY + L D L H+ ++ R ++N E + YP + T L Sbjct: 323 R----INFYLDFALYDLLVDHMKSSVYRMSSGEVLENPFRGEIEKGYPEVFCTVEECLKP 378 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQEN----DLHEKQIILLTGNDSEREAQIEQQLRE 361 E GV + +E + + F + L ++ + +L+ + +L++ Sbjct: 379 LEDYLGVKVPRDEVSFLVMYFASMLERDKLERMRERKVPAVLVCAMGRGTVQLMLAKLKQ 438 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 L + L I + L+ L+I+ P ++ L +IR+ Sbjct: 439 LEDV-LEITDVRSSHELKDMGNINDQLVISTVAFPDGEIKN-ILMVSPLLEQEDIYRIRR 496 Query: 422 M 422 Sbjct: 497 K 497 >UniRef50_C0CV60 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CV60_9CLOT Length = 699 Score = 141 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 54/415 (13%), Positives = 129/415 (31%), Gaps = 16/415 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L+ +R I+ L +T+ ++ V + D+ +E R + + L + Sbjct: 87 LTGEERMLLIVFDLCWSNGYSTIQDIADKYFVSRTTVNADMVAV-KEYCRKNGINLISQR 145 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 ++ + +R L +R L + + + G+ + ++ Sbjct: 146 GKGLCIDADEVGRRKYLSKVIRDFTALTGDRTDCDRSIYAQ-WFEEDGLNK-------IK 197 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 A+V + L +++ + + R L++Q+A E Sbjct: 198 AIVTDVEEAFATYLDDIAYEALVIHIALSIKRFRLDEEYGEPKAADRIERDSLQYQMALE 257 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I R +P E ++A+ + + D L +L+ + Sbjct: 258 IVRRVNECFRIRLPDAEISYVAVH-MGAKSSAITKQEASGDVLLEFYCIKLIAGVSKRIG 316 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + L + L H++ R+ + ++N L +E YP L + Sbjct: 317 YDLTSDDRLYEFLIQHISACTYRTKNGMLLENPLKDELIHNYPELYGAIKDTFPAVGGLN 376 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTLLPLN 368 + +D+E + + F A + + E+ ++++ + L L + Sbjct: 377 LIVPTDDEIAYILLHFAAAINRRKQNAERLVNVVVVCATGIGTAELVVTGLNRNFKLNIR 436 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ + LII + + L ++ K L Sbjct: 437 -GTVARHQLEKFLKKEDVDLIITTVPLQT---RKTFVKVSPLLKRDDIVRVSKQL 487 >UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZWZ8_ENTGA Length = 640 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 67/413 (16%), Positives = 146/413 (35%), Gaps = 26/413 (6%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R I L L TM SE V DI + + + LTL + Sbjct: 89 ERIKNIELLLLFHEEYITMQQISEWLEVSLSTVKADIKQVEL-FCKDYGLTLFSKAHYGL 147 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 ++ GT +R + +L R P +D+ L++ ++ Sbjct: 148 KIVGTEEKKRQAIL-YLIRNIIHTPVLTERY------------KAFHFVFDEEALRSCLS 194 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV-AQEIGR 193 ++ Q + + +++ + + T +R + ++ + +++ Sbjct: 195 EKLQQHQLKASDIVFENIIQHIRLLVFRITQNNT--LTNDERTVRTATDKYDLLTEDLVS 252 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 + + E ++ R ++Q QL+Q+I++ + + +F Sbjct: 253 YLETAYPITFSTMEKNYLHEQLRGKFSVLDDRTSNQ---QLKQAIEKTLELVDLRYHTQF 309 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 +Q L + L H+A L R +DN + ++ Y + ++ + Sbjct: 310 RTDQELGNALLMHVAPLLQRLYTGHQLDNPIIDDIYTQYANVFNVAMVFISELNKDLDAD 369 Query: 314 LSDEESGLVAVIFGAWLMQENDL---HEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 +S +E G VA+ F A L ++ + K+I ++ ++ L L + Sbjct: 370 ISKDEIGYVAIYFAASLEKQANQLIDDYKKIAVICSTGGGASYLLKVNLERLFS-NAEVT 428 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ Q + L+I+ + F+ P+IYT L + +I K L Sbjct: 429 TFALNEVDQID--KSFDLLISTVPLDQEQFAIPIIYTKTILNRAEINKIEKDL 479 >UniRef50_C9KLV3 Putative multidomain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLV3_9FIRM Length = 703 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 73/408 (17%), Positives = 138/408 (33%), Gaps = 36/408 (8%) Query: 17 RCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR-YHQLTLTTGYDGSYR 75 R ++L + ++ F ++ V + ++ + Q+ +T Sbjct: 108 RNRLLDYMLITEPGISLQDFMDIFQVARNTVLQELRRLEVYNKKASFQVRVTPR---GRI 164 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +EG+ L +R + L + T ++P L + L Q+ +L Sbjct: 165 IEGSELAKRRWIIENFAAILHLLEKYYTLSYSPDLPALL---------------QSYEDL 209 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 L ++FL Y Q + +T + E +A+ Sbjct: 210 VGSSLTDDAHHFMMYFLTWYDQRLVNGDRVSLTQTTWSEEEDRIRDWAEAFLARHDIN-- 267 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 DE ++ L V + D L L + F L + Sbjct: 268 --------DTDECQYLCRLMRQQAVTSVSQKDALYDS-LHHFADHLASRFASLSGLDITQ 318 Query: 256 EQG-LCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 EQ L D+L HL A +R I N + + + Y L T+ A+ E + Sbjct: 319 EQKVLVDRLTVHLISAYHRLQNGIRYHNPMLSKIKQDYQSLFYLTKTAVKSQEYLWHADF 378 Query: 315 SDEESGLVAVIFGAWLMQE-NDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 SD+E L+A FG ++Q+ +L ++QI+++ + + QLR +S Sbjct: 379 SDDEIALIATYFGGAVVQQTEELQQRQILVVCSSGIGTSQFLLLQLRSRYPQVHFTGPLS 438 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPLFSP--PLIYTDLTLTTHQQEQI 419 LQ P ++ T + P++ TT + E++ Sbjct: 439 TAECLQ--FPLDDVGLVITTTSRQYFQNIPCPVLSISPLPTTQEWEEL 484 >UniRef50_C7N9S2 PTS modulated transcriptional regulator, MtlR family n=4 Tax=Leptotrichia RepID=C7N9S2_LEPBD Length = 685 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 66/432 (15%), Positives = 143/432 (33%), Gaps = 25/432 (5%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 + L LS R + L LF + E + D+ E + Sbjct: 72 LFEILEKIHKLSIEDRIDILKLILFFDEKGLNITKICEELEISRTTIKKDLK-LISEEFK 130 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGF-----RLCPSFITSQFTPALKSELK 115 + L YR+ G + L + F + + +Q +K Sbjct: 131 MQGIELVYKNANGYRLNGNFREILIKKIELLEKIFGSLNDKNSSKVVKAQVYRYFFKYIK 190 Query: 116 RRGIA--RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNP 173 ++ I + F + +N+ K F LL + Sbjct: 191 QKNIENTKKFIVEIEKVMFLNINEESYNKIFS----------YVLILLNFEKIYENSNDL 240 Query: 174 LQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLF-MALLFSMLRVPDPLRDAHQRDR 232 +++ + E++ ++I ++ + E L + L + + ++ + Sbjct: 241 TAKKFLINTEEYKKIEKILKNILNKNEIK---TEILIEITDLIMGININSLKNNSFEDWI 297 Query: 233 QLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLY 292 IK++++ ++ ++ L + L H+ A+ R I I N++ +E Sbjct: 298 NEELIIKKMISKVSKIVKTDLTRDEILYNGLLYHIKPAMYRIKNNIQITNSVFQELILEK 357 Query: 293 PRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSERE 352 ++ A+ E + V ++E L+ A + + K++IL+ G Sbjct: 358 DPILDVVNKAIEEIEGLFEVKFPEDEIALMGFHIKASIERNTSEKTKKVILICGLGYGSS 417 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPL-FSPPLIYTDLTL 411 +EQ L+E L+I + ++T P A + + T+ L + P+I + L Sbjct: 418 KVLEQSLKE--NYDLDIVDVLPYYLIKTSMPNYANIDLILSTIDLEENYDIPVIKINPLL 475 Query: 412 TTHQQEQIRKML 423 + K Sbjct: 476 KEQDFILLSKYG 487 >UniRef50_B2DUK0 Transcriptional regulator, BglG family protein n=1 Tax=Streptococcus pneumoniae CDC0288-04 RepID=B2DUK0_STRPN Length = 457 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 123/396 (31%), Gaps = 30/396 (7%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + VL R I L F + + + V + DI + I+ + L Sbjct: 76 SDELVLPKSTRLALIYLYTFCRLDFISNNHYQDFLKVSKNTTLSDIQSLRK-IMLDNDLE 134 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 L Y + G+ N+ R F++ + S + YD Sbjct: 135 LGYSRAKGYTLHGSEWNKH-------RLAFQMVSELLESSIGIWGLDYVLSSWGYSLTYD 187 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 L ++ ++ +E + + L+ CL + ++R L Sbjct: 188 ---------LINQVVKDYYEKLQLVPIVNQLKVCLFGLVFILCRYQRDVERVCLSETLVS 238 Query: 186 QVAQEIGRHWQ------RRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK 239 V Q+I D+ ++ +L S + Q + Sbjct: 239 PVIQDITTILLDTVVDLGIIDTVFSEDDYRYITVLLSSCF----EGEVDVAPVYFNQLTE 294 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 +++ ++ + F +GL + L HL A R F + N YP L Sbjct: 295 AIISRMEDISLLHFKQREGLRENLRRHLIPAYYRLKFGLPSSNEYVLHVKEHYPDLFELV 354 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQ 357 + +L + D E+ + FG +L + + L +K + ++ N +++ Sbjct: 355 KDSLMPLMDAIDNPIPDSETAYFVIHFGGYLKKADTLPQKCYKAAIICPNGVSSSLMLKE 414 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPY 393 L L I + LQ A ++ + Sbjct: 415 NLLALFPQIEFIGTSKIDD-LQVKASSDYDMVFSTI 449 >UniRef50_C9A1R6 Predicted protein n=4 Tax=Enterococcus RepID=C9A1R6_ENTGA Length = 651 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 65/414 (15%), Positives = 143/414 (34%), Gaps = 26/414 (6%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S R+ I F F+E V D+ E + + Sbjct: 88 EYSPEYRKLFIFANYFFSKKPMHYQGFAEYFYVSYQSIKKDVDELFAFCQKKKVRASMSA 147 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGF---RLCPSFITSQFTPALKSELKRRGIARNFYDD 126 ++E Q+ +L + RL S I + F P + + Sbjct: 148 K--GLKLEEEESVQQATFKSFLEKHTDSARLDHSAIQTLFDPKIVTL------------- 192 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGIT-PQFNPLQRRWAESCLEF 185 AL++ S L ++ S + L + L+ L + G Q L + + Sbjct: 193 --TTALISEISLTLGRQLNSYFVESLTVSLEIFLSRICLGRHLEQQENLGFEKLKQMKLY 250 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 VA + + + ++ L + ++ +R+ + ++ + ++ Sbjct: 251 MVAVSFAERIESELAVSLAETDIQYICSLLLAHGIEPYMQITEKREANVIETTEEMIEKM 310 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 L + + L L +H+ ++R + + N L + Y + T+ A+ G Sbjct: 311 SRLLDTDLTQDNLLLQALLSHIVPMIHRLKNGMLVKNPLLRLIKKQYSTMFTLTKYAIGG 370 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 E + + L+++E + + F + K ++++ + I ++++ Sbjct: 371 LEKNFALFLTEDEVSFLTIHFQLAFEKIKVT--KHVLIVCSSGLATSELIFNRIKQTISA 428 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 ++ +S L + + LII+ T+PL SPP++Y TT + I Sbjct: 429 TTVLEIISA-EKLASTSLELVDLIIS--TVPLEEVSPPVLYVSPLPTTEEIAMI 479 >UniRef50_D1AGS1 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGS1_SEBTE Length = 696 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 41/398 (10%), Positives = 139/398 (34%), Gaps = 15/398 (3%) Query: 32 TMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWL 91 T+ S+ + DI + E ++ + + + Y + G + R + + L Sbjct: 108 TLQALSDELLISKATLRKDIKD-MNEKIKEFNVKIDINNNQGYMLTGEESSIRQLMINIL 166 Query: 92 RRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL---QALVNLCSRRLQKRFESRD 148 + +L + ++ + + ++++ ++ +K Sbjct: 167 HKYGGFIEEIEKEDINNLQIVKLLIFEKKKKYFQNERINLYKSILLKIQQKTKKIITDEA 226 Query: 149 IHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEP 208 L L + +++ + + + E+++ +EI ++ + Sbjct: 227 YDALLLNMIITSIRNRNSHFITDDISNSNFIKGTEEYKIIKEIFQN----EDIDYREKDL 282 Query: 209 LFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLA 268 + + + + ++ + R++ ++ ++ F ++Q L +L H+ Sbjct: 283 IIFTDFYMGSYSYNTKFSFYLNWMKIETLVGRILEDAAKVFDINFKNDQILIKELINHMK 342 Query: 269 QALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGA 328 A+ R + + ++ E+ Y L TR +L ++ ++E + ++F Sbjct: 343 PAIYRIKNKMSLKVSILEDVKSEYADLYEKTRVSLGVINEFLDENIDEDEIAFITIMFKR 402 Query: 329 WLMQENDL----HEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPR 384 + + + ++ I+L+ G + + + E + + + + + Sbjct: 403 AINRNQEKLMGEEKRNILLVCGLGYSSSQFLAENINERFEVNI-VDIIPFNQLENFEYIK 461 Query: 385 GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 L+I+ T+ + + ++ + L E++ + Sbjct: 462 SVDLVIS--TIDIEMEGMEVVKVNPILQKEDIEKLEEY 497 >UniRef50_C7WZJ5 Predicted protein n=7 Tax=Enterococcus RepID=C7WZJ5_ENTFA Length = 650 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 58/416 (13%), Positives = 142/416 (34%), Gaps = 25/416 (6%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 LS RR +I+ ++F T+ + +E V D+ EI+ + + + + Sbjct: 88 QLSPVNRRVKIIQSVFFEEDNPTLESLAEQYLVSKTSLYNDLK-IINEIIVSNGIEIISN 146 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN- 128 + +G +L + + + F+ ++ + + F Sbjct: 147 -NDGLTSQGAENEIQLAI------------KQLVTHFSNLIEEKSVNAKLYHFFEKQLVD 193 Query: 129 -LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQ-FNPLQRRWAESCLEFQ 186 + +++ R L + + L L + G + + F Sbjct: 194 IVSKILHKNFRELTENVSDYYMESLLTTLLVQCRRIQMGYHVEGEDDYLFSSIRYMETFV 253 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 VA ++ + + + +++ L + D + + RL++ Sbjct: 254 VANDMSERLSQETVLNFSEADKDYLS---RQLFAHRVTTEVKASDEKYVDLVYRLISRMS 310 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 ++ + ++ L + L H+ + R I I+N L E Y L AL Sbjct: 311 KIEKIDLTQDEHLFNSLLYHIPAMILRLKRGIHIENPLLENIRDQYSELFSIVWYALVIV 370 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 E +Y V L+D+E + + F L +++ I+++ I ++R+ Sbjct: 371 EQQYNVILNDDEISFILIHFQIALDRQSKAS--NIVIICQYGMSSAQFIYSKVRKFIPAH 428 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 N++ +++ F ++ +I + +P P + ++ +I + Sbjct: 429 DNVEISTLERFNKSDKENIDLIISSID---IPQSKTPFVKVTPLVSNQDYIKIMEA 481 >UniRef50_B0NY60 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY60_9CLOT Length = 543 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 55/404 (13%), Positives = 142/404 (35%), Gaps = 31/404 (7%) Query: 31 ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFH- 89 T +E + + E E L + ++L YR++ R+ L + Sbjct: 1 MTTQKLAEKLFLSVPTMLKVLKECE-EWLEVYHISLVNERGKGYRLKSEENEYRVALKNL 59 Query: 90 -WLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRD 148 +++ I F+ D + ++ + F Sbjct: 60 IMMKKPGEEIKENIDYFFSN---------------IDVSAIRKCIIQTENEWDYHFTDES 104 Query: 149 IHFLCLY--LQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPD 206 + + +Y + Y + + + P + + + E+ I + + Sbjct: 105 FYEILIYCCIAYKRKELALPLVSDYFPEELKILKKYNEYAFTVAIFEKLEEVFHVHFLIE 164 Query: 207 EPLFMALLFSMLR------VPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLC 260 + LF+++ + V L + D +L + R++ R++ +V ++ + Sbjct: 165 DVLFLSIQILCSKFIGISDVDVTLSQVKKYDNKLVDFVDRMLKVIRDILDVDLTSDEKVK 224 Query: 261 DQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESG 320 + L HL + R + N L + + Y + R + A FE YG+ ++++E G Sbjct: 225 ESLIIHLRPTIFRLRYGTPQKNALIDFIKKEYKNVFRASWAISILFEEYYGLQITEDEIG 284 Query: 321 LVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQT 380 + + A + ++ H+ + ++++ + +++++++ IK +S+ F + Sbjct: 285 YIVLYIQAAIERKK--HQYRTVMVSNFNMGHTQLVKEKIKKSVPEIDEIKFVSIHDF-KI 341 Query: 381 GAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 +II+ T ++ L +R L+ Sbjct: 342 ADYEDYDIIIS--TEERKEKDKRIVVIPNILNETGISTLRAHLD 383 >UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax=Lactobacillus plantarum RepID=C6VLU3_LACPJ Length = 634 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 62/426 (14%), Positives = 142/426 (33%), Gaps = 29/426 (6%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 P L S S +RR I+ L Q + ++ + D++ + Sbjct: 79 FPILKDNSQ-SEQERRISIMTFLTQQSKPVLLDDIADHFFISRSTLERDLNVLKMD---- 133 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRR--GFRLCPSFITSQFTPALKSELKRRGI 119 + L LT + + + + R + L+ G + + T + T K + Sbjct: 134 YGLKLTATTE-GVKFNSSESDVRRVIGQLLQSYWGQEIKQNQQTGKMTRTFKVPQSLKRY 192 Query: 120 ARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 + +Q ++N + L+ L ++ + + G Q Sbjct: 193 VNKQTLN-QMQKVLNKFVKILKVDVNEYQYESLLIHTTIAIQRIKNGEFITQTTTQN--F 249 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK 239 ++ ++ + +P +E ++ + + + + D ++ Sbjct: 250 DTMAISPSTNKLVKMLIVAFKCEIPDEEIAYLNMHVAAI-------EDGYIDLDRSGLVE 302 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 R + + +V + L L HL AL R I I N + +P Sbjct: 303 RTIVDWLR--SVLTDYDNQLLRNLTLHLRPALVRIKNGISITNPYCNQVKTYFPVAFDQA 360 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH---EKQIILLTGNDSEREAQIE 356 A E +Y + L+++E +A+ F +++ + L E I+ TG + ++ Sbjct: 361 LALAMAIEKQYHLQLTEDEIAYLALHFESFIERRKVLKPDVELAIVCSTGYGTA--ELLK 418 Query: 357 QQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQ 416 Q++ + + +SV + + + T+PL + +I L + Sbjct: 419 QRVMDKLPDVQIVGTLSVNELMTSTVTADIII----STIPLKMSGTRVIQVSPFLNDQEL 474 Query: 417 EQIRKM 422 + K+ Sbjct: 475 SLLEKL 480 >UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D455_9CLOT Length = 639 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 61/413 (14%), Positives = 137/413 (33%), Gaps = 15/413 (3%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 A +R ++ L ++ V + D+ + R IL L L Sbjct: 93 PQDANERIYYLIRKLLVVDYPLETGELADEIYVSEPTVVRDLQK-ARIILAKRNLKLVME 151 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 G+ R+EG+ LN+RL + + + + + L R+ + + Sbjct: 152 KKGNVRLEGSELNKRLAISEFFFHNEKHI-----GKEENVFRDGLNRQEVE-------GI 199 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++ L R + L +++ L ++ + + + +E+ A+ Sbjct: 200 RIILRLVCREFSIVLSDASLSNLVIHVFIALTRYRFYNFIEADEALQAEYRDAVEYAAAK 259 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + +P DE ++ A+ + R+ D + Q ++ Q I + E Sbjct: 260 RLTEALEEAYDFVIPDDEVIYYAMHLRVKRIYDEIPLTDQERVRINQCISQCFWEIYEEY 319 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 V F +Q L LY H+ + R + + Y ++ T Sbjct: 320 GVDFSQDQELRHYLYQHIPLMIIRLKNHMSFRYPQVLDKPSSYLFSIKLTYIVTDVIGRF 379 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN- 368 Y V ++ +E +A+ F L++ I + G +R L Sbjct: 380 YQVGVNAQEFEYLAIYFCFALLKSRSGKRICIGVYNGGGRAETVMYFNAVRGAFLEEDYE 439 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 ++ + Q + ++ ++ P + ++ D T + I + Sbjct: 440 VRIVDYGDLFQRERGT-VDICVSTCSLEEPTGAEVVMIRDRTYIQEIRRAIYR 491 >UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4E8_9FIRM Length = 654 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 130/395 (32%), Gaps = 14/395 (3%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R I+ L T+ + + + D+ E REI + + L L + + Sbjct: 113 ERVNYIVKKLLTVDYYLTIEDLVDELYISRSTLTADLKEV-REIFKDYNLELISRPNYGI 171 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + G + +RLC+ + + T F + + ++ L+ Sbjct: 172 LLVGEEIAKRLCIAEYFFHA-----NVSTGYFAADNAMFVSSTNQDEIRF----VRGLLE 222 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC--LEFQVAQEIG 192 + + + +++ + + + S E+ AQ++ Sbjct: 223 EIMEKYGIHMSDQSLQNFVIHIIIAIRRWKFYNYVKIEDENLGELRSSVAREWPAAQDLV 282 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 R Q + +P +E L+ AL F + + + Q+ +++ + ++ V Sbjct: 283 RRLQDKLEILLPQEEILYFALHFKSKHITELDEITSEEIEQVEKTLYDIYRMLQKRFGVI 342 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 ++ + L H+ + R + + N + +F Y T E + V Sbjct: 343 AINKDRYEEYLRMHIPAMVARLRSGLVMRNPMIYDFLNKYLFSTHITMMISDILEQNFNV 402 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN-IKH 371 ++ E + + E+ H +I+++ G + ++ E N I+ Sbjct: 403 RMNKNEFAYLVLYTNLLFSTESRPHGAKILVVCGRGRPETITLINEINENHAALANMIEI 462 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIY 406 V + A LI++ + P + Sbjct: 463 CDVGELENHDLHQ-AELILSTVPLQASYPVPSIYM 496 >UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWK7_STRM9 Length = 628 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 58/425 (13%), Positives = 130/425 (30%), Gaps = 30/425 (7%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + +++ +R+ ++ L + +E + S DI + + I+R + L Sbjct: 77 SYKIPITSEERQIYLIDRLISEEGYIKLEDIAEKIYISVKTLSNDIKKIEK-IIRTYNLE 135 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 ++ G LN R L L + F +++ YD Sbjct: 136 FERKPYYGLKLVGEELNIRNFLIDVLEKRLNENKFF-----------------DSKDRYD 178 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA---ESC 182 ++ L R + + L + + A + +++ + Sbjct: 179 INSIAKLTYTFLRDKNVKISDISLQNLVAAIYVTFYRVEANKRIKSIDIEKNELFLSKKT 238 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 + + I E ++ + F + ++ I+ L+ Sbjct: 239 HILECMKYIYNELSHNVDLDSNDIE--YITIHFLTSETLTYKSLKTEDINEVNDIIQELI 296 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + + + Y+++ L LYTH+ R F I I N L E+ + P Sbjct: 297 YYVKLTFKIDLYNDEELYKNLYTHILALCIRIRFGIKIKNPLLEDIKKNMPLEYNVATYV 356 Query: 303 LAGFESEYGVH-LSDEESGLVAVIFGAWLMQE---NDLHEKQIILLTGNDSEREAQIEQQ 358 + LS+ E G +AVI + + N ++K ++++ + + Sbjct: 357 CNLISKRFNKRSLSEAEIGFIAVIL--HMSKGININMSNKKNVLIVCPSGRGVSKFLIYT 414 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 NI L +I + + P+ + L + Sbjct: 415 YSNFFSEYTNIISSCGANELVDMDLGNVDIIFSLIDLD-MKIDKPVYKINYFLNDEDILR 473 Query: 419 IRKML 423 I+ +L Sbjct: 474 IKNIL 478 >UniRef50_UPI000196BD9B hypothetical protein CATMIT_02553 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BD9B Length = 639 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 62/428 (14%), Positives = 143/428 (33%), Gaps = 31/428 (7%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILRYHQL 64 + L + + R +L + ++ V + S I + L + L Sbjct: 82 SDIVDLDSSEDRIHFILNKLLYSHDYISADDLADSVYVSKNTFSNYIKIIKKS-LPLYNL 140 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 ++ G ++R C+ + L S F+ + +Y Sbjct: 141 EYIVKPGVGIKIIGNESDKRDCIIN---ETHPLNEYSTVSTFSKG----------EKIYY 187 Query: 125 DDTNLQALVNL---CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 +D + +V+L + + + + + L Y + + + Sbjct: 188 NDVEVNYIVSLLINVFNKHKIQTDDYKLKNLTTYFALMISRILNDDYISVMN-NTEIPNN 246 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSM-LRVPDPLRDAHQRDRQLRQSIKR 240 E + EI + E +++L F ++ + D D+ + I Sbjct: 247 IKE--IMNEICESLSDYYDITITRGEKQYISLHFISNIKYNNNSID----DQSIHNLIDS 300 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 + + N D++ L L+ H +++ + N L YP ++ Sbjct: 301 FLEGIYKGYNFDLRDDKILRSDLFYHFRTSISMMELHLENKNPLLNTIKTNYPLPFEISK 360 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQ 358 L+ +S + +++ G +A+ GA + + + +K + L+ G+ +E + Sbjct: 361 TILS--QSSNIITFPEDDIGYIALHIGAAIERCFSGSIKKKAVYLVCGSGQATARMLEAR 418 Query: 359 LRELTLLPLN-IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 L + L +K +S+ +L + T+PL P I D +L E Sbjct: 419 LHNVFANKLTVVKRLSLIEYLNCTENDFKEIDCVISTIPLEQSYVPTITVDFSLNQQDIE 478 Query: 418 QIRKMLES 425 + +++ S Sbjct: 479 MVSRLITS 486 >UniRef50_A0KQ06 Transcription antiterminator, BglG family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KQ06_AERHH Length = 634 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 70/422 (16%), Positives = 143/422 (33%), Gaps = 34/422 (8%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++ +R + + L + ++ + D++E RE L + L + + Sbjct: 87 PRTSRERVLHLQILLLTAEQGIKLDELADTWYLSRAALQGDMAEV-RERLAHFGLAIDSK 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 R++G R CL L + + + N L Sbjct: 146 PRQGMRIQGGETAIRACLTQLLYQELLHSN---------------PLQSLLPNLCPSKTL 190 Query: 130 QALVNLCSRRL---QKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + + N +L Q R + L +Y LL+ AG + L++ +E Sbjct: 191 EVVGNHIHEQLGRHQLRLADESLQQLAIYCAVALLRQAAG-----HELRQFTSEDLTAPL 245 Query: 187 VAQEIGRHWQRRALQPVP--PDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 +A + R P +E +A+ D + + + Q ++ L+ + Sbjct: 246 LA--VARDIYGELPTLTPPGEEEIACLAIQIQARLTADAPQLSPAMAAESEQLVEHLLAY 303 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + + L L TH++ L R + IG N L + + YP T AA++ Sbjct: 304 IHQHYPYDLRGDLQLRADLQTHISAMLLRVKYQIGSHNPLADHIKQYYPLAYDITLAAIS 363 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLH---EKQIILLTGNDSEREAQIEQQLRE 361 + + L+ E G + + G L + D+ Q +LL + +E +++ Sbjct: 364 EWIRQTPYRLTHHEIGYLVIHIGVGLERHYDIGYTRRPQALLLCDAGNATFRVLEARIKR 423 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 SV+ + T+ + P++ T +Q EQ+ K Sbjct: 424 EYPQLQLTMLESVRDYE---GLARIEQDFVISTVKAGEKNVPVVQVAPFPTQYQLEQLGK 480 Query: 422 ML 423 ++ Sbjct: 481 LV 482 >UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F792_LACPA Length = 651 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 61/416 (14%), Positives = 139/416 (33%), Gaps = 31/416 (7%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 RR I L L M ++ V D+ RE+ ++ L++++ + Sbjct: 93 RRSIITLNLIMQNSFVKMDNLADDYFVSRSTLERDLRAIKREVSKF-GLSVSSTVN-GIA 150 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT--NLQALV 133 + G ++R R+ ++ + +T QA++ Sbjct: 151 IVGNEQDKR-------NYASRIISNYWRESIKANRLVVHLPQDFDNLIGSETLRTAQAVL 203 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHH-AGITPQFNPLQRRWAESCLEFQVAQEIG 192 + R + F L +++ ++ A P ++ + + + Sbjct: 204 SELQRVTKIEFTEYQYQSLLIHICISTVRIQNAEYLPTWSSASQALSPETS------ILT 257 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 R + VP E ++ + + D + R+ + + F + N++ Sbjct: 258 RLLEEAFNIQVPKSEQEYLNIHILAAKQSKLTPDDFKGQVVNRRLLN--IADFLK-TNIQ 314 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 YD+Q L + L HL A++R + N E RLYP+ + Y V Sbjct: 315 IYDDQ-LINDLTIHLGPAMHRFQVGLQASNPYTSEIMRLYPQAFELAFDLSRKLDDRYLV 373 Query: 313 HLSDEESGLVAVIFGAWLMQENDL----HEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 + E +A+ F +++ + ++ + ++ + Q+L+ +N Sbjct: 374 TVDKNEIAYLALHFQSFMERTTKATVSNNKINVAVICSTGLGTARLLTQRLKASFADKIN 433 Query: 369 IK-HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I +SV + + T+PL L ++ ++ + K + Sbjct: 434 ITRVLSVPNAFKAKFVEDMII----STIPLELPGQKVVVIKPLFEPKEERLVAKEI 485 >UniRef50_Q18CM3 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=Q18CM3_CLOD6 Length = 637 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 56/414 (13%), Positives = 144/414 (34%), Gaps = 27/414 (6%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 ++ +IL L T+ S ++ +I +IS+ L + L ++T Sbjct: 94 KQVEILNLLLCNNKKVTLNDLSNKLYINKNIVREEISKLSVA-LNNYNLNISTKKGSGIY 152 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +EG + R+ L +L + I + D ++ ++ Sbjct: 153 IEGDEKDIRIMLVSFLFKYIDKYRLNID-------------EIEYFHIVDIIIVKNIMLT 199 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + R L L+L +++ G + + + ++ L + E+ + Sbjct: 200 IEEDMDIRLTDISFKQLMLFLLINIIRIRLGNSLKVSNTKKELKLKMLILDIEDELKSNL 259 Query: 196 QRRALQPVPPDEPLFMALLFSMLR---VPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 +E LF+ L + + ++ + + +L K+++N E + Sbjct: 260 SIVLNY----EEKLFIESLILGMNKQINSNNIKKSLYLNEELASYTKKIINLVSEESGIN 315 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 F ++ L +QL HL +++ + ++N L + + L +++ G Sbjct: 316 FNNDILLYEQLICHLNVTMHQMKSNVYLENPLLDNIKTKFCFLFTVISSSIEI--ELKGK 373 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHE--KQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 +++ E G + + F L ++ E K+ ++ ++ ++ + I+ Sbjct: 374 QITEGEIGYLTLHFQTSLERKYSKRESNKKASIVCPFSFGVSMLLKVKIEKRFDNIKIIE 433 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + + + + IIA P+ T T + ++++ Sbjct: 434 TLREEDLKRDNFNKTIDFIIAFQ--EYENIQKPIFITTPLFTDEDENKLKEFTN 485 >UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JT03_LACRH Length = 598 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 69/406 (16%), Positives = 145/406 (35%), Gaps = 25/406 (6%) Query: 17 RCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRV 76 R +L + S V + DI+ R + + + + L + + Sbjct: 60 RKYAILAQLLNDKHLSYQRLSSDYLVSRSSIANDIAFIKRLLAKDN-VALNFD-NTGTFI 117 Query: 77 EGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLC 136 EG ++ + R+ + + + ++ + R L + V+ Sbjct: 118 EGNEEEKQKII-------KRVVATTLEGKHERSVLEMFVDPSLIRII--RKTLVSKVHDL 168 Query: 137 SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQ 196 + + + + I + + Q +TP R ++ V E+ + Sbjct: 169 DLEVPENYLNDIILSTTVLISRG--QVAKHLTPITASSLSRLLLDLDKYPVVYELLESVE 226 Query: 197 RRALQPVPPDEPLFMALLFSMLRVPDPLRDAH---QRDRQLRQSIKRLVNHFRELGNVRF 253 + + DE +++ + + ++D +R++ I+ + N+ Sbjct: 227 QAGIYKFSKDELRYLSYVVLGNGLRFFMQDGTIPIPFERKIHALIETVSEKI----NLNL 282 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 + L L HL Q + R + N L + + YP L AL F +E + Sbjct: 283 TKDVQLEGDLSLHLYQMVLRLQADTTVINPLLSDIKKNYPSLFGIVWYALVDFATENHLT 342 Query: 314 LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 +SD+E V + F A + + ++I+ + N A + Q+R++ I+ +S Sbjct: 343 ISDDEISFVTIHFQAAIERSK--KRRRILFVCLNGIGTSALLSAQMRQILPDVSLIQIVS 400 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 + L ALII+ T+PLP S P+ LT ++I Sbjct: 401 -RDALSQQDLSDVALIIS--TIPLPKQSVPIATISPMLTADDMKKI 443 >UniRef50_C9B288 Predicted protein n=2 Tax=Enterococcus casseliflavus RepID=C9B288_ENTCA Length = 488 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 62/419 (14%), Positives = 144/419 (34%), Gaps = 29/419 (6%) Query: 15 QRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 +RR I L L + + + + S DI+ E +Y +L L D Sbjct: 86 ERRHAIALHLLFKSPKRLMIKELFAPYYLSEAVISSDINRL-SEYFQYFELQLI-RSDKR 143 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 V GT N R C+ + +T ++ N +D + +++ Sbjct: 144 ISVIGTEKNIRRCVNDLFTKTHVWNEEMVTQKYPI-------------NAFDINFITSIL 190 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAG------ITPQFNPLQRRWAESCLE-FQ 186 R+L + +L +L+ G + ++ E E +Q Sbjct: 191 EFIERKLANSIAYPYNMNIFSHLYILILRMREGEIDREEFIEGLDEEEQHLIEQHQEFYQ 250 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 +AQ++ + +P E ++ RV + ++ + + N Sbjct: 251 IAQQVIEKINAYLVTELPESEVFYLYQYLVSSRVENKPLAMTNLTKEASEITEFFTNQME 310 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + ++ + L H+ L R I + N L + YPR+ Sbjct: 311 KALGIQLNQQTD-KTDLLCHIQPMLYRLKNKIIVKNGLLSDIQLEYPRIFEQVAQVSKEV 369 Query: 307 ESEYGV-HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 E YG +S++E G + + F + + ++++++ + ++ +++ Sbjct: 370 EKTYGTNPISEDEIGFLVLYFVKF--KVIRRRRQRVLIMCSSGVGTSELLKVKVQRAFPE 427 Query: 366 PLNIKHMSVKAF-LQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S + + + LI+ +P+ P I + T +++++++L Sbjct: 428 LDIVDVLSARMYRKHAQDYQNIDLILTTINLPVET-QVPTILVNSVFTKQDEKRVQQLL 485 >UniRef50_C6SRZ6 Transcriptional antiterminator n=1 Tax=Streptococcus mutans NN2025 RepID=C6SRZ6_STRMN Length = 693 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 47/417 (11%), Positives = 129/417 (30%), Gaps = 23/417 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L +R ++L + + V D+ + R+ L ++ + + + Sbjct: 87 LEREERILDLILDAALGKQKIFLYQKEKFYKVSKSTMDEDMRQI-RQRLSFYHIDIVSHP 145 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 +EG+ ++ R+ L+ L + ++ I ++ + Sbjct: 146 KKGLILEGSEISIRIMLYSLLSPEISKM----------GINFNFRKNRIINHYISADMIG 195 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + + + + + L LL+ Q L + + Sbjct: 196 KVNKIFDQTIFSITDDIHRTHFILLTCVWLLRVKQKSRLQEEELPKEEFHYSKSIE---G 252 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + + E ++ + + + Q+ +L++ + Sbjct: 253 YLKAICQMFTIEPSIVECQYIHAILQSFNTKNDDSPINWVQLQILTI--QLIDFVEQETE 310 Query: 251 VRFY-DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + F + L LY H+ + R I + N L E + Y + + E Sbjct: 311 IPFNMKDNILQQGLYQHMVSMVARVKNNIQLTNPLTERIKQSYGSIYQAVAKFSFHLEKL 370 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHE--KQIILLTGNDSEREAQIEQQLRELTLLPL 367 + D+E + + F L + N ++ + +++ + + + + L+E Sbjct: 371 LKRKIIDDEIAFLTIYFSTTLSEINQENKYWYRAVVVCNHGTATGKLLAENLKEFF---- 426 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 NI+ ++ + + + T+ + P++ D + + +I L Sbjct: 427 NIEVFAILNSREIDIIDKLDVDLVFSTVDIDYKGKPVLILDSIIQEDTKLRIGHFLH 483 >UniRef50_A0AKK6 Complete genome n=19 Tax=Listeria RepID=A0AKK6_LISW6 Length = 668 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 57/413 (13%), Positives = 140/413 (33%), Gaps = 25/413 (6%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 RR I++ L ++ ++ V + D+ +E L ++ L Y Sbjct: 87 RRKLIMIKLLLHNHYMSLGALADYVYVSKNTMLTDVKSI-KENLHEFEIQLDYSRKDGYA 145 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 V G+ R L +R + +F K + ++ F L+ + Sbjct: 146 VSGSEFLIRNLLAELIREVVQTP----YGKFVLDEKKLI---TVSEVFLLKKRLEKV--- 195 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 +LQ F + L L + + ++ ++ EF + +E+ W Sbjct: 196 -ESKLQITFTDEQMEELPYILHGIIKRSKVTTKKWTFKIELYDIKNTREFPIMKEMF--W 252 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + ++ L+++L + + + ++ ++ + Sbjct: 253 GYDF---LSENDLLYLSLQVLASNLVESALHFSDSE-EIAYAVDEFIALLEMYFATEIMK 308 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 + +++ H+ A+ R++ I+N L ++F + Y A FE G S Sbjct: 309 KNEFKEKVILHVRPAIYRTILGFQINNPLKKQFIKEYTSTFNIVEKASKPFEKLVGHKWS 368 Query: 316 DEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 +EE +++I W+ Q + + + ++L + + + + L+ + + Sbjct: 369 EEEIVYLSMIVLGWMYQIEETEQPIFRAVVLCKSGTSISKLLLENLKMMFPNIDFQGAYA 428 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA 426 V+ R I + + L+ ++ IR+ ++ A Sbjct: 429 VRQL--KTVARDIDFIFTTVPVQSSAT---IFVIPSILSKDSRQTIREQVDKA 476 >UniRef50_C6VLN1 Putative uncharacterized protein n=1 Tax=Lactobacillus plantarum JDM1 RepID=C6VLN1_LACPJ Length = 682 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 72/414 (17%), Positives = 135/414 (32%), Gaps = 34/414 (8%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 + + R + + ++ + A D+ L + LT+ +G + Sbjct: 91 SQRDRKLLTMLSLINHEYVSLENNQRRFHITHHTAVSDLKALKVTALN-YGLTIISGTN- 148 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 + GT NQR +W + P + S LK + Sbjct: 149 GTSLTGTERNQR----NWFLTVL--------GENGPLINSALKIDPN-----TSLEITHF 191 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 + F + L + + L + + + +E I Sbjct: 192 LRTLETDTGNYFSDDTLTILITFFSWYLNRLLTNHSFELKQNDANMSEQV-------GII 244 Query: 193 RHWQRRA---LQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 +W + Q +E LF+ + ++ +L +++++ F ++ Sbjct: 245 NNWAKAFLCHYQIYNVNEQLFIT-YLVKSGQFIHINPDNKLAHKLAPIVRQIIRRFNDVS 303 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + + L L THL R + I + Y L+ TR +L FE Sbjct: 304 GSQIS-VESLEVPLLTHLLSTYYRVKYQITFKQPSLSIIMKQYNELIFFTRLSLKPFEDL 362 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 LSDEE LVA+ FG L +EN + ++ + + ++L + Sbjct: 363 IDQRLSDEEVTLVAIYFGGILRKENKPD-YAVDVVCSSGIGTSKVLHEELCQRYPNVKFS 421 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + MSV L+ R LII+ + + P I T Q +QI + L Sbjct: 422 EPMSV-FKLKNSHSRNIKLIISTIKL-TDSYPVPTIVVAPIPTKIQWQQINQAL 473 >UniRef50_C9A5U2 Transcriptional antiterminator n=3 Tax=Enterococcus casseliflavus RepID=C9A5U2_ENTCA Length = 644 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 64/419 (15%), Positives = 150/419 (35%), Gaps = 20/419 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 ++ +R+ +L LF+ ++ F + + + + T R+ L +QL + + Sbjct: 92 TSEERQAYLLFLLFKNENPLSLDDFLDRLFISKNTFYSYLK-TARDNLATYQLKIVNRPN 150 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + V G +R + L + ++ FT + R N A Sbjct: 151 IGFEVLGNEFAKRQAISDLLIE--KDLQEYLVG-FTEMELELFDTIDLTRLQELSLNHLA 207 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++L + + L + + H P P + A+ +V Sbjct: 208 PLDLLDSDY---YHKNILSHFALAISRFIAGHQINEFPLHVPALKEDAQ-----KVVGHF 259 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRD---RQLRQSIKRLVNHFREL 248 + E + + + + P + D + + ++ L+ ++ Sbjct: 260 LEEIDHAFDIQLTAGEKQYF-IYYLAMNAPRLVETGDASDSSTKTAKAIVEELLTAIKQT 318 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 N ++ L D L +H+ +N +L N L + +P+ L Sbjct: 319 SNYALETDKMLIDDLTSHIEGFINMNLMDARRSNPLLATIRKSFPQAYDLCLTHLETVSL 378 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 ++G + S +E G +A+ + + + + H+ ++IL+ G IE ++ + Sbjct: 379 KHGFYFSPDEIGYIALHIAGAMERSSIRNHHKHRVILVCGTGRAMSRIIEAKI--IKHYQ 436 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 I+ + ++++ +A+ T+PL FS P IY ++ + +I +E+ Sbjct: 437 ETIEVVDRFSYVELQQCDLSAIDFVITTVPLEQFSVPSIYINMAKLDKEIGKIEPFIET 495 >UniRef50_D1AKT2 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AKT2_SEBTE Length = 678 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 59/409 (14%), Positives = 135/409 (33%), Gaps = 15/409 (3%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 + + R L + S+ GV DI E RE+ + + L L Sbjct: 85 SKEERQSFLKAKLFFEKKINITKLSKSLGVSRTTVKSDILEFAREMEK-YDLQLENNQ-- 141 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 + G R + R FR F+ K + I + + +++A+ Sbjct: 142 ---LHGDEGKIRNLI---FREFFREISELYYQDFSNDKK--IPAENIFFEYLTEADIKAV 193 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQF--NPLQRRWAESCLEFQVAQE 190 R + + +++D +F + Y ++ + + N +++ +S E+++ + Sbjct: 194 KKFI-REISRDLKNKDNNFYEYFFSYMVISYLRIKQKKTITNVENKKFLQSIEEYKMISK 252 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + +E + +A + ++ +K L+ + N Sbjct: 253 DIGPLEESLGVKYGKNEKMILADYMLGFHSYAYNTLIFDKWLEIELLVKELIKNVSSRTN 312 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + L + L H+ A+ R +I + + + + Y L+ +L Sbjct: 313 TDILSDDELLEGLLNHIKPAIYRMKNSIFTEEDIYFDEVKEYKELLEIVGESLKPLAELI 372 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 G S+ E L + F A + + K I+L+ + ++ + + + I Sbjct: 373 GSGFSNSEKALFTLHFLASIERNTKKTVKNILLICSGGYGTSRLVADRMEKEYEVKV-ID 431 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 +S T +I T P++ T + Q+ + Sbjct: 432 VISYFELFDTNIENVDIIISTIKTKERDFNGIPVVTVSPFFTMNDQKIL 480 >UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAW7_9FIRM Length = 642 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 71/413 (17%), Positives = 133/413 (32%), Gaps = 37/413 (8%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R +ILL L ++ + + D+ + E+L QL L + Sbjct: 96 RISKILLLLLNRHRAVSVMELEDKLYISRSTLQNDLKKVE-EVLEKFQLELLKSSNKVM- 153 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 ++G +N+R CL L + + D+ L + N+ Sbjct: 154 IDGYEINKRRCLAE------------------QDLYLAHIKNEQGMVYIDERQLAKIKNI 195 Query: 136 CSR---RLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 + + D + L+L + + G Q L E+++A+ + Sbjct: 196 LTDIFVNYKYHIMDTDFNNAILFLNIMICRMGEGFYIQPGELDISEQLG-NEYEIAKAVF 254 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 RR VP +E + +L RD+ +++ I R V Sbjct: 255 GKISRRFFIKVPDEEIRYFSLYLKG---QGNNRDSDTITQEMDNFISEAFEEIRRNFGVD 311 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 F D L L H R + + + N + +P +YG Sbjct: 312 FTDNINLRITLALHCMSLSIRIKYDMQVKNDMLNYIRETFPLGYDIGAYFAFLLHQQYGK 371 Query: 313 HLSDEESGLVAVIF-GAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 +S++E L+AV F + L + K+I++++ + ++Q TLL ++ Sbjct: 372 RVSEDEVALLAVHFYSSLLELNSRQGNKRILVISALKNSMTLLMKQ-----TLLKWFSEY 426 Query: 372 MSVKAFLQ----TGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 +SV F+ T I +Y D H I+ Sbjct: 427 VSVIDFVNPMDVTEDMLDEYDIFLTTEKEEFFEKGLAMYVDTFPNQHDYMNIK 479 >UniRef50_B6FXT7 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FXT7_9CLOT Length = 696 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 58/420 (13%), Positives = 140/420 (33%), Gaps = 24/420 (5%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 LS +R+ I + L + T++ +E+ V D++ ++ L+ LT+ Sbjct: 80 YTYKLSKEERKIMIAILLIESSEYITLSKIAEILYVSRATIINDLNSV-KDYLKSGNLTV 138 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + + RVEG ++R F L + + S K + + D Sbjct: 139 LSHANKGLRVEGFESDKR---------NFLLKAILSDKDYKNLIYSVNKENVLMDSEMDK 189 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + ++N + + L Y+ + + G ++ + Sbjct: 190 --IHKIINEQEHYHETYLTDSSYNKLKNYIMISISRLRRG-----EMIEHQDIICEETHS 242 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQRDRQLRQSIKRLVNHF 245 +A++I ++ + DE +++ + L+ ++++ +++ ++ V Sbjct: 243 MAKDILKYISQYCNVMTTADEEAYLSKFLNGLKYLKKENENSNESMVKIQFITRQFVEGV 302 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + D+ L HL + N +E P +V T + Sbjct: 303 SHDLKINLNDDYDFYLNLSNHLESIFRSKNYNFP-QNEFIDEVVSKNPDIVAATNKNIDV 361 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTL 364 E +SD E + + A + ++ +IL+ ++ +L+ T Sbjct: 362 IEKYAQRKISDIEIAYITIHICAAIERKKKQEIAFHVILVCNGGVGTSQLLQAKLK--TH 419 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 I + + + A L+I+ T+PL + T ++ ++ Sbjct: 420 YNFQIVDIVSAHDEKNIINKNADLVIS--TVPLKNIDIDYVIVSPLFTDEDYIRVGSKID 477 >UniRef50_C4V215 N(Pi)-phosphohistidine--sugar phosphotransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V215_9FIRM Length = 630 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 57/386 (14%), Positives = 119/386 (30%), Gaps = 28/386 (7%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 ++ R +I+ TLF E + D+ R +L + L+L Sbjct: 86 TSEVRIGKIIRTLFYSSAPCKSDNLCEALHISRSTLKKDLRGV-RALLGMYDLSLVHQPY 144 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + G + R CL RR L E+++ G Sbjct: 145 AGLSIRGAEKDIRRCLVRMKRRILAGD--------GGILHQEVQQTG------------R 184 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ ++ R + L++ + + G + + + + +++ + Sbjct: 185 VLQEIFKQYDCRMAAYSFQDFVLHIDVSIERMRQGHEIR-DEALPSLPAAPQDEALSRAV 243 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + + E ++ LL +V + A + + ++ + Sbjct: 244 VVAMETQYRMRFSAGECRYILLLLMSRKVLSWKQ-ASTAAADVYAVVMEMLAAVQRTFCY 302 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 F + L L THL R L + +N + E P A S YG Sbjct: 303 DFSHDFELIASLSTHLIPLRTRLLCGMQQENPVGREIREGGPLAYEMANVACGILRSAYG 362 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 S +E+G +A+ F L + K+++++ G + + E K+ Sbjct: 363 CEASADETGYIALYFHVALERMRAQRRKRVLIVCGAGKGAAMLLAHTIEE-----NYGKY 417 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPL 397 + V + L A Y + Sbjct: 418 LEVIGTYEAADFSDTDLQAADYILST 443 >UniRef50_Q5WJN3 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=Q5WJN3_BACSK Length = 634 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 51/407 (12%), Positives = 113/407 (27%), Gaps = 28/407 (6%) Query: 17 RCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRV 76 ++ T T+ ++ + + + E L L L + V Sbjct: 90 HIAMMSLFAIMHETVTIQQLADEFHLSRSSIQKYLPDIE-ETLDRFGLQLARQARKGFLV 148 Query: 77 EGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLC 136 GT + R +FHWL ++ + F + + C Sbjct: 149 NGTERSIRRAIFHWLTDK-QVDLERVERWF------------DCEKDGGRGQIDRWLRSC 195 Query: 137 SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQ 196 Q + + L ++L + + G +R E + Sbjct: 196 QEDRQVFYSEGSLRVLTIFLCWWYERILHGHYVYIPQEEREAGHRLGE------LSEVVS 249 Query: 197 RRALQPVPPDEPLFMALLFSMLRVPDPLRDA--HQRDRQLRQSIKRLVNHFRELGNVRFY 254 E F+ L +V DA + ++ + L+ + V Sbjct: 250 ALCDNRTAEHEHAFLNTLLGQAKVVSYKNDAVLGESYQKEKDFCTSLLEQISTILQVDLL 309 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 ++ L + L H+ A R + IDN EE Y + + ++ G L Sbjct: 310 KDKKLMNDLLYHMKAAFLRIEQGLVIDNPYTEEIKVRYRAIYEM----VHQITADMGYTL 365 Query: 315 SDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 E + + A + +I++ + + +L++ I ++ Sbjct: 366 VAAEVAFITMHVSAGFDRSKSKRFLPTVIVVCSTGLATSSILTTKLQQAEPGFHLINVVN 425 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPL-FSPPLIYTDLTLTTHQQEQI 419 + + ++ +P+ + L + I Sbjct: 426 TEDLEKALEESDVDFVLTTQELPIKQWNDTKIFRVSPLLNDEDKRTI 472 >UniRef50_C2C4I7 Protein-N(Pi)-phosphohistidine--sugar phosphotransferase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4I7_LISGR Length = 635 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 54/400 (13%), Positives = 129/400 (32%), Gaps = 32/400 (8%) Query: 31 ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHW 90 T+ + V D+ L + L L ++ G R L Sbjct: 103 ITIDQLASQLQVSRSTIQQDLKRV-DTFLHTYGLLLKRKAHYGVQIVGPEKKHRAAL--- 158 Query: 91 LRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSR---RLQKRFESR 147 ++ +L + R+F ++QAL Q Sbjct: 159 -------------AKLLNTSSEQLSQTEAYRSFRKTLDIQALTLFIKERVTHYQIYISDV 205 Query: 148 DIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDE 207 + + ++ + + + ++++I + + VP E Sbjct: 206 ALRNMVDHVCILAFRVSQKNYIRMTGPLEKNPIYT---ALSKDIAAFIEAQYHLDVPEAE 262 Query: 208 PLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHL 267 F+A D + + +L+ I + + F ++ L + L H+ Sbjct: 263 QDFLAEHLIGKVTVDTIS--KEEKMRLQAKINDAMTAIDQQYGTAFQPDEELQNALLLHI 320 Query: 268 AQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFG 327 + R + + +DN + E+ Y + + + + + ++ +E G VA+ F Sbjct: 321 YPLMLRLHYNLQLDNPIIEDLYTRYANVFNISISFVQYLQDNEDFIITKDEIGYVAMYFA 380 Query: 328 AWLMQENDLH---EKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAF-LQTGAP 383 A L +E + K+I +L + + ++ +L N + ++ + L Sbjct: 381 ASLEKERNQKFRMYKKIGVLCSSGAGAAYLLKMKLESAF---TNAEIVTFSMYELDKLRN 437 Query: 384 RGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++I + + + P+I T L + +++ L Sbjct: 438 SDCDVVITTFPLTIDDLDIPVIETALLPGDQELARLKDTL 477 >UniRef50_Q7X1P0 Putative transcriptional regulator n=1 Tax=Lactococcus raffinolactis RepID=Q7X1P0_9LACT Length = 608 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 66/422 (15%), Positives = 131/422 (31%), Gaps = 35/422 (8%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L+ R+ +L + ++ + V DI + + + + L Sbjct: 8 LTENDRQALAILMISAELEEISVYHLQDALFVSRGTILADIKKIQKYAQ-ENDVVLKYSR 66 Query: 71 DGSYRVEGTVLNQR----LCLFHWLRR-GFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 YR G R + L + + I +QF+ L+ R F+ Sbjct: 67 QSGYRFYGDERLIRQIIQKSILALLYQPATKELMVNILNQFSDD--FHLRVMTEIRQFFK 124 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 + L + + I+FL + + + L + Sbjct: 125 NHRLTVVPSRTEE---------TIYFLAFVIIRSSTHSIVLTDSEISILNHLIIKKK--- 172 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 E+ +H+ Q E + A++ + + L + Sbjct: 173 --VVELVQHFPGVVNQ---EAETNYWAMVLMGM---IQAKVREYETEFLYDCSYEICRKV 224 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + F + D +Y HL A R L I N L E+ + Y L + T +L Sbjct: 225 EHSTGIEFKAFNNVVDHIYAHLVPAYFRILGKFTIQNVLIEQIQKQYNHLFQITHYSLTP 284 Query: 306 FESEYGVHLSDEESGLVAVIFGAWL--MQENDLHEK-QIILLTGNDSEREAQIEQQLREL 362 E G L D E G ++FG + M E ++ + +++ + + +L L Sbjct: 285 LEELLGERLPDSEIGYFTILFGGEIANMAERPEDKRYRALVVCPSGMSSSLIMRSELATL 344 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + I+ S Q LI + + PL L+T + ++ + Sbjct: 345 FPMLDFIEARSFFELEQMPL-DDYDLIFSSVDLET---QKPLYVMPPILSTTDKVELLRQ 400 Query: 423 LE 424 ++ Sbjct: 401 VQ 402 >UniRef50_C3W9R0 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3W9R0_FUSMR Length = 663 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 64/412 (15%), Positives = 142/412 (34%), Gaps = 21/412 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R +L ++ FS+ + DI +E L+ ++ L Sbjct: 81 FSTSERIALFMLHSLIFKENINISLFSKKLDISKPTLKNDIK-LLQEQLKESKIYLLQSE 139 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + ++ L +L + + K + + + + Sbjct: 140 TSDYYFKYNDIDFCFFLVSFLNKYIIFKNNNFKP-----RKKTFFYQYFFKKLNINELFK 194 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 +L + + F S + L + L + + + N + +S EF++ Sbjct: 195 IDYSLINAIQENNFISDEALNLFIIFTCILNYYQPNLKYKSNI---NFFKSSSEFKIINN 251 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRD-RQLRQSIKRLVNHFRELG 249 I D L++ + ++ + I +++ F L Sbjct: 252 ILPELN--------IDYKLWLCDFLIGISYNKNNPLGIFKNWLNIEMEIYKIILDFSNLK 303 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + +++ L +L HL L R+L I + N++ E Y + GFE Sbjct: 304 KINLTEDKILHQELLNHLKPLLYRALKNINLGNSILREIKHNYNNSFEICKNIFIGFEKN 363 Query: 310 YGVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 + +S++E V ++F + + E + K I ++ + ++ +L+EL + N Sbjct: 364 TSIKISEDEIAFVVLLFERAIQRIEKNKTIKNIAIVCNFGISTSSFLKMRLKELFKIN-N 422 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 I+ S++ + Q + LII + P++ LT E ++ Sbjct: 423 IQTYSLQEY-QNNLNKIPDLIITTIDLEERDDKIPIVKVSPILTKTDIEILK 473 >UniRef50_D0GPJ5 PRD domain protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPJ5_9FUSO Length = 708 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 55/419 (13%), Positives = 144/419 (34%), Gaps = 23/419 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R + +F + FSE G+ + E I++ + LT+ Sbjct: 102 LSEDERIDILFYEIFLLKNEFILQYFSEKYGLSKTTIRYSLKEV-DHIIQEYNLTIEMS- 159 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCP--SFITSQFTPALKSELKRRGIARNFYDDTN 128 + Y+V G +N R + + LR+ ++ + + + ++ L ++ I + Sbjct: 160 NKGYKVTGNEINIRKYIINILRKYLKIIKGKNIEYNPYMNIVEQFLSKKNIEFS------ 213 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 + LV + K L L++ +L++ + + + + + EF Sbjct: 214 -KILVGEILNKTGKTVSDEAFETLQLFILTSILRNEKNLKIKEDAENKIFLLKTSEFIK- 271 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 + ++ + + + F +P + I++ + Sbjct: 272 ----IKEILKKIENIEEKDIYYFVDFFLGSYSYNPDYSYFLNWVLMESLIEQFLVKLSRE 327 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 + + L +L HL A+ R + ++ +E Y L T +L Sbjct: 328 LKINLATDVILRKELLNHLKPAIYRMKNKFKLTESILKEVKAQYTDLYDKTTMSLKIISD 387 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQEN----DLHEKQIILLTGNDSEREAQIEQQLRELTL 364 + ++E+ + VI +++ N + +I+++ G + + + Sbjct: 388 FINIPFDEDEAAFITVIVQRAVLRNNSSLLSKKDPRILIVCGLGYSSSRFLYENINSHFQ 447 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + I + + A ++I+ T+ L +I + + + +++ Sbjct: 448 VNI-IDIIPFNQLESYNYLKKADIVIS--TLDFSLDGIDVITVNPIINENDIVKLKNYG 503 >UniRef50_Q03C88 Transcriptional antiterminator and PTS system component IIA n=9 Tax=Lactobacillus RepID=Q03C88_LACC3 Length = 698 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 66/418 (15%), Positives = 142/418 (33%), Gaps = 22/418 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 L+ QR +LL L Q + E + D+ ++ +Y+ LTLTT Sbjct: 85 ALTPEQRAVYLLLDLLQATQPVYLVDEQEKMQISKSSMDSDLRNLRADLAKYN-LTLTTS 143 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD--T 127 ++EG + R L R L + I Q + S + + F T Sbjct: 144 PKLGAQIEGNERSIRTMFGDVLTRQHALV-TLIAQQL---IASGMYVDKMKEVFTKQDVT 199 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++ L+ C + + + L L + +G + + + + Sbjct: 200 YIRDLLRRCFPKGALAANDMYSQQVTVLLIIWLHRVRSGHYVKDDET--AVDLNKENAKF 257 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 E+ +H+ + E ++ L + + Q+ L++H Sbjct: 258 LNELIQHYALQIDVA---SELGYVGFLINSFNRRGAIDLDDWVKAQIFSVA--LIDHMET 312 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 F + L ++LY H+ R + + N L + + Y + Sbjct: 313 EIGFPFSKNEKLFEELYNHMTALFKRLSQHVKVVNPLRKTIQQGYGPIYDAIDRFFK--T 370 Query: 308 SEYGVHLSDEESGLVAVIFGA--WLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 Y + +SD+E +A+ F A ++ ++ Q ++ + + +L E Sbjct: 371 GRYQLTMSDDEKAFLAMYFSATQAEDRQRQDYQYQAAVVCNFGTATGRVLAAKLEERF-- 428 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 NI ++V + + G R + + T+ +P+ P + + + ++ L Sbjct: 429 --NIDVLAVLSTSEVGILRKLPVSLVFKTVDMPIDKIPSLKVNPIPSEVDLTRVAAFL 484 >UniRef50_B0P2P0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P2P0_9CLOT Length = 698 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 62/420 (14%), Positives = 144/420 (34%), Gaps = 19/420 (4%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 LS +RR L T++ +++ V D+ E R +L +L + Sbjct: 81 YTYKLSKEERRMLAAAILINTKDHITLSQIADILYVSRATIINDLDEVKR-MLESGKLKV 139 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFIT-SQFTPALKSELKRRGIARNFYD 125 + + R+EG ++RL L + G T F L E+K + Sbjct: 140 ISYSNKGLRLEGLEGDKRLFLLRLMSVGSNGIKENSTIRSFFKGLNMEIKMSEDEQR--- 196 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 NLQ ++N + +L YL + + G P++ + ++ Sbjct: 197 --NLQKIINEQEHAYGRFMTDDSFDYLLQYLMLSIERIRNGNVMTE-PIE----GNKSKY 249 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 +A++I ++ + E F+ + + R + L+ ++ + H Sbjct: 250 AMAKDIQKYICQYWDLEDAKGEVDFLCGVLDSMSYVKRQRREQ-KIIGLQLVTRKFIEHI 308 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + V + + L HL + R F + + +++ P+++ + Sbjct: 309 SKDLGVNLNRDFAFYENLTDHLESIIMR-SFNVTQRDDFLKQYVEKNPKVLEVVQKYKDM 367 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTL 364 + +S+ E + + A L + E +++++ G + ++R Sbjct: 368 LSNFMDREISEIEIDYIVIHICAALERRKKKEVEFRVLIVCGGGIGTSQLLLAKMRNRFD 427 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 ++ + L + L+I+ T+PL + I + ++ +E Sbjct: 428 F--HVVDVVSAHLLDNEKYQNIDLVIS--TIPLRDYEGEYILVSPVFSDEDYLRVNGKIE 483 >UniRef50_C4FUH4 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUH4_9FIRM Length = 652 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 79/409 (19%), Positives = 137/409 (33%), Gaps = 26/409 (6%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R +L L + +E V + D+S G LTL DG Sbjct: 93 DRERHLLKALCLDSGGLDLEDLAEQLYVSSVTLNRDLSRLGPRFQAC-GLTLV-RQDGRL 150 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 +V+G R CL +L+ I +E D T Q +N Sbjct: 151 QVQGRESAIRQCLRTYLQEWLYQMGEPI-QDLVVFFHAE-----------DITLCQHALN 198 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQR-RWAESCLEFQVAQEIGR 193 S+ Q F + L L + G Q + R + A E+ Sbjct: 199 QLSQTYQHDFTADYYLLLLLECLIIRRRGQLGQVLQVRAKELVRDLSHLEVYFFAGELLE 258 Query: 194 HWQRRALQPVPPDEPLFM--ALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 +AL + E + LL ++ P + R+LRQ ++ L+ + NV Sbjct: 259 AVTGQALVQLSAIEIESLAYTLLAVGFKIQSPDYE-----RELRQQVQALIQRVSDFLNV 313 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 +Q L L H++ + R + + N +E + Y L L F Y Sbjct: 314 DLSQDQHLLAMLANHMSSMIFRLRHHMHVTNPALDEIRKQYLTLFNIVWLVLRDFAEHYD 373 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 + + DEE + + F L + I+++ + I +L+ + + + Sbjct: 374 MEVPDEELAFLVIHFQIALEKVQR--PLTIVVVCQHGLAASELILAKLQRIFSPSDRLLN 431 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + + RG L+I+ + L P+ +T + EQIR Sbjct: 432 LKWQELADMDW-RGVDLVISSLDLKEELP-VPVQRVSPIMTQDELEQIR 478 >UniRef50_B6G1I6 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1I6_9CLOT Length = 641 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 56/421 (13%), Positives = 153/421 (36%), Gaps = 48/421 (11%) Query: 11 LSAPQRRCQILLTLFQ----PGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 +++P R ++ P LT +A + + D+ + IL +++ + Sbjct: 87 MNSPNSRIVFIMQKLMNTDCPYLTDELAYDMNI---GRSTVNGDLKRLRK-ILEEYEIEI 142 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + + G L R + + GI +++ D Sbjct: 143 LGKTNTGISLNGDELEIRFFILENMY------------------------DGIYKDYPLD 178 Query: 127 TNLQALVNLCSRRLQKRFESRD--IHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 ++L + + + + + I F + + L + + + + + Sbjct: 179 SDLIDAIKQIALEYELDSVAVEYFIKFFTVMIDRFLNGNPLSKLDK----KYEELKESIA 234 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV-- 242 + A+EI + + + +P +E LF+++ + +R P ++ Q++++ + L+ Sbjct: 235 YIFAREIANNISKVLMTDLPEEEILFISIPIAGMRTPTNIKTI--EKLQVKKTTEDLILK 292 Query: 243 --NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 + ++ N+ + + + H+ +NR + I EE Sbjct: 293 IKDKIKQEMNINIQS-EQIMHEFMYHIQFMINRMKYGFKIRGIDCEEIKSSNSVAYTVAE 351 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQ 358 A + ++E + +S+EE L++V FG + + N K I ++ G +E Sbjct: 352 VAASVIQNEENIEISNEEIALMSVYFGILIDKSNLEKNKIYNIAIICGTGRISARVVESN 411 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 L+++ + + + + + + L+++ + + S + D+ + + + Sbjct: 412 LKKI-IKNETVMDLYSDSNIDSEILDKYDLVVSTVKLDIDTKSEIIYIKDVLDRSELKRK 470 Query: 419 I 419 I Sbjct: 471 I 471 >UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A0_9FIRM Length = 654 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 64/401 (15%), Positives = 135/401 (33%), Gaps = 26/401 (6%) Query: 29 LTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLF 88 T+ SE+ + S + ET + L + L+ + ++G+ N+RL + Sbjct: 115 ERITVTRLSEMVYQSVPVCSRHL-ETCTQWLSLFNIQLSIKRNYGISLQGSEENKRLAIK 173 Query: 89 HWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRD 148 H + QF + EL L++ + + F Sbjct: 174 HLVINDPIHSVEQSIQQFAKGINLEL--------------LKSCIADIEKEWNFTFAEES 219 Query: 149 IHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEP 208 + LY + + + + E+ +AQ I R ++ +P E Sbjct: 220 YKSILLYAALAITR-SDFSVLHLSESEEEIVVKYNEYNLAQSIFRIINKKFYVNIPESEV 278 Query: 209 LFMALLFS---MLRVPD--PLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQL 263 + A+ M+ + + D++L+Q + ++++ ++ NV D+ L L Sbjct: 279 KYFAIQLLCSKMIHTQEIPAKEELTSYDKKLKQFVHKIISVISDIMNVDLMDDNELYYGL 338 Query: 264 YTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVA 323 H+ A+ R F L + Y + R + A A FE Y + ++ E + Sbjct: 339 LNHIRPAIFRMKFEKHSTKELTNFIQQEYKQTYRVSWALSALFEEYYDIKITSTELSYIT 398 Query: 324 VIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAP 383 + L E + +I L+T ++R I S + Sbjct: 399 LYIQTSL--ERRMRPLKIALVTELGMGLNQMFCNKIRMSIPKIDEIAIFSYHEV-KIDVV 455 Query: 384 RGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 LI+ + ++ L+ E++++ +E Sbjct: 456 GKYDLIVTTSKLDFDQEK--VVQIKSLLSNTGVEELKQKIE 494 >UniRef50_C3WAJ1 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAJ1_FUSMR Length = 686 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 52/408 (12%), Positives = 130/408 (31%), Gaps = 13/408 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L++ +R + + + + E+ + + D + ++++ +T Sbjct: 83 LTSEERVEFLEIFILLNNQPFNIQRIIEILDITRNTFKSDFEKVK---QNFYKMGITLNN 139 Query: 71 DGSYRV-EGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 DG++ + G+ L L + F + + + + + + Sbjct: 140 DGTFSLKRGSSRTYILIPLSRLIKRF-IFQEEVYYYPNKFIFNNAFKHISYDKINI---I 195 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + R K L Y+ + Q N + +S EF++ Sbjct: 196 TQYIREVLERSNKILSDESYQMLIAYIIIVVETVANNYKLQTNTNNEEFFKSKEEFKILT 255 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + E + + F + D ++ + I++ + Sbjct: 256 SKKYILEEEFKIKIDETELIRLTNFFLGSQTYTKKIDFYENWIRSEIFIEKFIRDVSSQL 315 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + L + L HL A+ R I ++N++ EE +L + ++ Sbjct: 316 KYNLTKDTILFNGLLNHLKPAVYRIKNKINLENSIYEELILKEKKLFDIVKKSIENIPEL 375 Query: 310 YGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 +S++E + V F A + + +N +K+I+++ + Q L E + + Sbjct: 376 --KEISNDEIAYLVVYFKASIERIEQNKKVKKKILIVCNFGYGTSRLLSQNLHENYEVEI 433 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 + + V I+ T + P+I + L + Sbjct: 434 -VATLPVYELKNYKNLENIDYILTTTTFNQNSINIPIIQVNPILDKND 480 >UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2S2_9FIRM Length = 632 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 65/419 (15%), Positives = 140/419 (33%), Gaps = 28/419 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S R+ +L L + ++ + D+ E + RYH LTL + Sbjct: 89 SPENRKKYLLARLITENEYLNLYDLADEIYISPSSLRKDLKELKPTLERYH-LTLQHSHS 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 YR+ G + R CL + L + + ++ + +Q Sbjct: 148 SGYRITGKEKDIRRCLS--------------KEASISGIIDFLPQETMYKS-SQLSLIQH 192 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ + L L++ + + N LE++ A +I Sbjct: 193 VIAESLMNANISITADSCSALSLHILIAINRVETNNLI--NQEVSEAMRQSLEYKTAIDI 250 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRV----PDPLRDAHQRDRQLRQSIKRLVNHFRE 247 R + +P E + A + + + L + +D + ++ + + + Sbjct: 251 NRSIEEIFHVSLPEAELCYFAFHINGKKKINADHESLSEDLPQDAVIFYNL--FLRNILK 308 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 L + ++++ L L TH+ L+R + + + +P L+ Sbjct: 309 LSKIDLFEDKDLRANLLTHIVPFLHRLDNNMQVTQSNLSSIRDEFPFANELAVCGLSFIP 368 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSER--EAQIEQQLRELTLL 365 +YG+ +S+EE + L + + K I + ND + + + L Sbjct: 369 RKYGIAVSEEEIMYFTLHIALALERGPEARVKVNIAVISNDISSLFKLIAYRLNKTLADF 428 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 IK K+ L + +I+ + L F P + +L+ + +R ML Sbjct: 429 INLIKLFDAKS-LDAEELKKFDVILNATEVNL-RFDKPTLKIQPSLSENDLHILRLMLN 485 >UniRef50_D1AI87 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AI87_SEBTE Length = 689 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 59/417 (14%), Positives = 145/417 (34%), Gaps = 15/417 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + R + + + S+ V D+SE +EI + + + Sbjct: 87 NTKNDRKEYIKLRILLDEKINFSRMSDELDVSRTTVKNDVSEIEKEIKKEIKKDGIKLNN 146 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ + + R + + F + L L ++ D ++ Sbjct: 147 NNH--DNEETDIRNYILKNYKENINKF--FYMEETESGLIDTLVFNELSGADMD--MIRE 200 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 +N S ++ + ++ ++ YL ++ G + N + + ++ E+ + Sbjct: 201 FLNRISEEIENK-DNNFYEYIFSYLIVAYMRIRRGHLIE-NMKNKSFLKNTNEYILVSGQ 258 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + ++ +E L + + +++ ++ +++ ++ Sbjct: 259 IKILEKSFGITYAENEVLQLVDYILGFISYGYNTSIFESWIEIKLLVQEIISEVNNYTDL 318 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 ++ L + L H+ + R ++GI+ + E + YP L + AL G E+ G Sbjct: 319 DITSDEELFNGLLNHIKPVIYRMKNSLGIEEEIYYEAIKAYPELFDIVKNALKGLENLIG 378 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQ--IILLTGNDSEREAQIEQQLRELTLLPLNI 369 + + E L + F A + + + K I+L+ G + +QL E + + Sbjct: 379 KKIDNSEIALFTIHFLASIERNRNFRNKYRNILLVCGGGYGTSMLVGKQLEENYDINITA 438 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMP---LPLFSPPLIYTDLTLTTHQQEQIRKML 423 +S L LII+ T+ + P++ T QE++ L Sbjct: 439 -TLSYMELLDYNL-ENVDLIISTLTLNEHLTEKINKPIVKITAFFTVEDQEKLNIYL 493 >UniRef50_B2TRB2 Putative phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Clostridium botulinum RepID=B2TRB2_CLOBB Length = 628 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 61/415 (14%), Positives = 145/415 (34%), Gaps = 34/415 (8%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 V S+ R I+L+L G T+ ++ V + D L + + ++ Sbjct: 85 VYSSDDRITVIILSLIIKG-KVTIEELAKDVDVSKNTLVQDFK-LVTAKLEEYDIQVSKK 142 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 ++ R F I S+ + LK ++K R D+ + Sbjct: 143 TYYGITIKDNEEKIRNVFFS------------IYSKLSDELKHDIKERLTQETNLKDSVI 190 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + + + + + I L + + + +++ ++ ++ EF V + Sbjct: 191 KEKIEKIEKNIGTVYSEESIEELEIIILLSINRYNNNFKIDYSEREKNSLIRRREFSVLK 250 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 EI + E ++ L++ D R A ++ + +++ + Sbjct: 251 EI---------LSLDDLEICYL------LKISDGSRRA--VGGKVNNITQEILDELCKTL 293 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 N+ ++ Q+ HL A++R + I+N + EE + + T L+ E Sbjct: 294 NIDCSNDLEFTSQIAMHLKVAIHRIKNNLVIENPMLEEIKYKMSFIYQITETILSSKEDI 353 Query: 310 YGVHLSDEESGLVAVIFGAWLMQE-NDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 GV +EE +A+ F A + +I+L+ + ++ ++ + Sbjct: 354 IGVKFPEEEIAYMAMYFDAIFERNIKSKFTYKILLVCNGGLATSSLLKVRIGAMLPELEI 413 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +K + I++ T+P+ +I + L ++I+ + Sbjct: 414 KNVCRLKDLDKELENTDIDFIVS--TIPVKADKYKVIKVNPLLDNSDVDKIKTEI 466 >UniRef50_D0DS07 Multidomain protein n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DS07_LACFE Length = 687 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 65/425 (15%), Positives = 133/425 (31%), Gaps = 46/425 (10%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L AP RR ++L + A++ T ++ + + D+ + + +Q Sbjct: 97 LDAPYRRA-LILFVLITDRIASLNTLADQFSISKNTVINDLKSINDHLAQTNQPLSVVNT 155 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 ++G+ +QR W+ + + + K E + + Sbjct: 156 AKGKTIQGSEYDQRR----WVFENNHVLFKSVLGEPYQTAKREFVTQQL----------- 200 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQ------HHAGITPQFNPLQRRWAESCLE 184 NL + F L ++Q+ L + H G + L W Sbjct: 201 ---NLLEKITGNSFTDESTQALIPFIQWYLTRLSLPNTHLKGFDDLGSSLTLTW------ 251 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 AQ + R E +++ + + + L K++V + Sbjct: 252 ---AQSLLRDCHIDNQA-----ECRYLSF-IINTQPLTHVDVDNPLLTTLEPIAKKIVRN 302 Query: 245 FRELGNVRF-YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F L V + + L HL R + I N L + +Y + T+ ++ Sbjct: 303 FEGLARVNLLSNNSKIVSDLAQHLVTTYYRVAYNINYKNPLLGQIRSMYQQTFSFTKVSI 362 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ----IILLTGNDSEREAQIEQQL 359 F +SD+E L+ F L + L+ Q ++++ + + L Sbjct: 363 QPFIKFTNHEISDDEVSLITTYFSGALYNVDLLNRNQHTPSVMVVCSSGIGTSRLLLSNL 422 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 I S + + L+I+ +P P++ + T + I Sbjct: 423 SSHFPSVNFIGPFSTFQYENSDL-SDVRLVISSVNVPAKNADIPVLVVPVIPTPDDWQTI 481 Query: 420 RKMLE 424 LE Sbjct: 482 ADSLE 486 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_B... 337 5e-91 UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR fa... 330 6e-89 UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 ... 325 2e-87 UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR fa... 324 3e-87 UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan opero... 324 3e-87 UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Cl... 322 1e-86 UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotrans... 320 5e-86 UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus ... 320 5e-86 UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR fa... 320 7e-86 UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 ... 316 9e-85 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 315 2e-84 UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacill... 315 2e-84 UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 312 1e-83 UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostri... 311 3e-83 UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=The... 310 7e-83 UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Hal... 307 6e-82 UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metab... 307 6e-82 UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR fa... 306 8e-82 UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR fa... 304 5e-81 UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus ... 304 5e-81 UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibaci... 304 5e-81 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 302 2e-80 UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR fa... 302 2e-80 UniRef50_P46321 Putative phosphotransferase enzyme IIA component... 300 6e-80 UniRef50_P54901 Stationary phase-inducible protein csiE n=121 Ta... 300 8e-80 UniRef50_Q63A16 Possible transcriptional antiterminator, bglG fa... 298 2e-79 UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collins... 294 3e-78 UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paeniba... 293 8e-78 UniRef50_P96574 Putative phosphotransferase enzyme IIA component... 292 2e-77 UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomon... 290 7e-77 UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 T... 290 8e-77 UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) ... 290 9e-77 UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_L... 289 1e-76 UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 ... 288 2e-76 UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alk... 287 8e-76 UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collins... 286 1e-75 UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR fa... 283 6e-75 UniRef50_O31644 Putative phosphotransferase enzyme IIA component... 281 3e-74 UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1... 278 4e-73 UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B... 277 4e-73 UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS sy... 277 5e-73 UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax... 277 8e-73 UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Lis... 276 1e-72 UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 T... 276 1e-72 UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan opero... 275 2e-72 UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcu... 275 2e-72 UniRef50_A8FDW3 PTS family L-ascorbate (L-asc) porter component ... 275 2e-72 UniRef50_C0ZED9 Putative uncharacterized protein n=1 Tax=Breviba... 274 4e-72 UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS ... 273 6e-72 UniRef50_C6J1G7 PTS system IIA 2 domain-containing protein n=2 T... 273 7e-72 UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=St... 272 1e-71 UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Ba... 272 2e-71 UniRef50_B0KCW5 Transcriptional antiterminator, BglG n=9 Tax=The... 272 2e-71 UniRef50_A8GHY9 Transcriptional antiterminator, BglG n=4 Tax=Ent... 272 2e-71 UniRef50_Q5E1U1 PTS system, mannitol (Cryptic)-specific IIA comp... 269 2e-70 UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus... 268 2e-70 UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR fa... 267 4e-70 UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecali... 267 6e-70 UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacte... 267 9e-70 UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Stre... 265 2e-69 UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerof... 265 2e-69 UniRef50_C5EW03 Phosphoenolpyruvate-dependent sugar phosphotrans... 265 2e-69 UniRef50_Q8NVE5 MW2083 protein n=56 Tax=Staphylococcus RepID=Q8N... 265 2e-69 UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Cl... 265 3e-69 UniRef50_C6CCS2 PTS modulated transcriptional regulator, MtlR fa... 263 1e-68 UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=... 262 2e-68 UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaeros... 262 2e-68 UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 ... 262 2e-68 UniRef50_C6IZU2 PRD domain-containing protein n=1 Tax=Paenibacil... 261 4e-68 UniRef50_UPI00017890F3 PTS modulated transcriptional regulator, ... 261 4e-68 UniRef50_C6DIT7 Transcriptional antiterminator, BglG n=5 Tax=Pec... 260 5e-68 UniRef50_C5EFX5 Transcriptional antiterminator of lichenan opero... 260 6e-68 UniRef50_C0CV60 Putative uncharacterized protein n=1 Tax=Clostri... 260 7e-68 UniRef50_B8DAY8 Transcriptional antiterminator, BglG n=24 Tax=Li... 260 8e-68 UniRef50_C6D7L7 PTS modulated transcriptional regulator, MtlR fa... 260 1e-67 UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 T... 260 1e-67 UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttle... 259 1e-67 UniRef50_B6EP62 HTH-type transcriptional regulator n=1 Tax=Aliiv... 258 3e-67 UniRef50_C1I943 BglG family transcriptional antiterminator n=1 T... 256 1e-66 UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostri... 255 2e-66 UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=... 255 2e-66 UniRef50_UPI0001694F32 transcriptional antiterminator, BglG fami... 255 2e-66 UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacteriu... 255 2e-66 UniRef50_A0AFK2 Complete genome n=18 Tax=Listeria RepID=A0AFK2_L... 255 3e-66 UniRef50_A4TMW0 RNA-binding protein n=24 Tax=Yersinia RepID=A4TM... 255 3e-66 UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostri... 254 4e-66 UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconost... 254 4e-66 UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostri... 253 7e-66 UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacte... 253 8e-66 UniRef50_UPI0001C425D1 mannitol operon transcriptional antitermi... 253 9e-66 UniRef50_C4V215 N(Pi)-phosphohistidine--sugar phosphotransferase... 251 3e-65 UniRef50_C7TG26 PTS system, IIAB component n=2 Tax=Lactobacillus... 250 8e-65 UniRef50_B0P1K3 Putative uncharacterized protein n=1 Tax=Clostri... 249 1e-64 UniRef50_B0MFP8 Putative uncharacterized protein n=1 Tax=Anaeros... 249 2e-64 UniRef50_B0P5V1 Putative uncharacterized protein n=1 Tax=Anaerot... 249 2e-64 UniRef50_A6CNR6 MtlR n=2 Tax=Bacillus RepID=A6CNR6_9BACI 248 4e-64 UniRef50_Q899A8 Transcriptional regulatory protein n=3 Tax=Clost... 247 5e-64 UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipe... 247 7e-64 UniRef50_C6JIT2 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 246 1e-63 UniRef50_B0MAW6 Putative uncharacterized protein n=1 Tax=Anaeros... 245 2e-63 UniRef50_Q8NYI2 MW0220 protein n=49 Tax=Staphylococcus aureus Re... 245 2e-63 UniRef50_C5J5A2 PRD activator n=16 Tax=Enterobacteriaceae RepID=... 245 2e-63 UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Cl... 245 3e-63 UniRef50_B0P2P0 Putative uncharacterized protein n=2 Tax=Clostri... 244 5e-63 UniRef50_Q5WCM9 Transcriptional antiterminator n=1 Tax=Bacillus ... 244 6e-63 UniRef50_B2VI26 Stationary phase-inducible protein n=7 Tax=Enter... 244 6e-63 UniRef50_Q65NB6 Putative uncharacterized protein n=1 Tax=Bacillu... 243 1e-62 UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-... 243 1e-62 UniRef50_C8Q416 Transcriptional antiterminator, BglG n=1 Tax=Pan... 241 4e-62 UniRef50_C3WDH7 Predicted protein n=1 Tax=Fusobacterium mortifer... 241 4e-62 UniRef50_A6LQ03 Transcriptional antiterminator, BglG n=3 Tax=Clo... 240 5e-62 UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli R... 240 9e-62 UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteri... 240 1e-61 UniRef50_Q5WC76 Putative uncharacterized protein n=1 Tax=Bacillu... 239 2e-61 UniRef50_Q9KGB4 BH0193 protein n=3 Tax=Bacillus halodurans RepID... 238 3e-61 UniRef50_C3RJ67 Transcription antiterminator bglG n=3 Tax=Bacter... 238 3e-61 UniRef50_B0MGN0 Putative uncharacterized protein n=1 Tax=Anaeros... 238 3e-61 UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR fa... 238 3e-61 UniRef50_B9Y4W4 Putative uncharacterized protein n=1 Tax=Holdema... 237 4e-61 UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotr... 237 6e-61 UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium... 236 9e-61 UniRef50_A0KQ06 Transcription antiterminator, BglG family n=1 Ta... 236 9e-61 UniRef50_C9KLZ6 Putative PTS system, IIA component n=1 Tax=Mitsu... 236 1e-60 UniRef50_C0CYQ2 Putative uncharacterized protein n=1 Tax=Clostri... 236 2e-60 UniRef50_C4FUH4 Putative uncharacterized protein n=1 Tax=Catonel... 235 2e-60 UniRef50_B6FYB2 Putative uncharacterized protein n=1 Tax=Clostri... 235 2e-60 UniRef50_D1ARV2 PTS modulated transcriptional regulator, MtlR fa... 235 2e-60 UniRef50_D1AHL2 Transcriptional antiterminator, BglG n=1 Tax=Seb... 235 2e-60 UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Cl... 235 3e-60 UniRef50_B6G219 Putative uncharacterized protein n=1 Tax=Clostri... 235 3e-60 UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbi... 235 3e-60 UniRef50_B0MGK7 Putative uncharacterized protein n=2 Tax=Clostri... 235 4e-60 UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Ali... 234 5e-60 UniRef50_C0D9V6 Putative uncharacterized protein n=1 Tax=Clostri... 234 5e-60 UniRef50_B6FXT7 Putative uncharacterized protein n=1 Tax=Clostri... 233 7e-60 UniRef50_B8DAX2 PTS system IIA 2 domain protein n=22 Tax=Listeri... 233 8e-60 UniRef50_A8RTN9 Putative uncharacterized protein n=1 Tax=Clostri... 233 8e-60 UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Cl... 233 1e-59 UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax... 232 1e-59 UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 T... 232 1e-59 UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Seb... 232 2e-59 UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enteroc... 232 2e-59 UniRef50_C3RLU7 Predicted protein n=2 Tax=Bacteria RepID=C3RLU7_... 232 2e-59 UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing prot... 232 2e-59 UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=... 231 3e-59 UniRef50_C3RP75 Predicted protein n=2 Tax=Bacteria RepID=C3RP75_... 230 6e-59 UniRef50_B9Y3S8 Putative uncharacterized protein n=1 Tax=Holdema... 230 6e-59 UniRef50_B0MBD2 Putative uncharacterized protein n=2 Tax=Clostri... 230 7e-59 UniRef50_C5RM48 Transcriptional antiterminator, BglG n=1 Tax=Clo... 230 9e-59 UniRef50_B0MEI2 Putative uncharacterized protein n=1 Tax=Anaeros... 229 1e-58 UniRef50_B0MH65 Putative uncharacterized protein n=2 Tax=Clostri... 229 1e-58 UniRef50_D1P1R2 Transcription antiterminator, BglG family n=5 Ta... 229 1e-58 UniRef50_A8R9X4 Putative uncharacterized protein n=1 Tax=Eubacte... 229 1e-58 UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactoba... 229 1e-58 UniRef50_C5EV18 Transcription antiterminator BglG family n=1 Tax... 229 2e-58 UniRef50_B0MDG5 Putative uncharacterized protein n=1 Tax=Anaeros... 229 2e-58 UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR fa... 229 2e-58 UniRef50_C2DAD7 BglG family transcriptional antiterminator n=2 T... 228 3e-58 UniRef50_Q5WJ14 BglG family transcriptional antiterminator n=2 T... 228 3e-58 UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Cl... 227 5e-58 UniRef50_Q5WJN3 Putative uncharacterized protein n=2 Tax=Bacilla... 227 7e-58 UniRef50_C6JP15 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 226 9e-58 UniRef50_C2C4I7 Protein-N(Pi)-phosphohistidine--sugar phosphotra... 226 9e-58 UniRef50_A8RV91 Putative uncharacterized protein n=1 Tax=Clostri... 226 1e-57 UniRef50_C9A5U2 Transcriptional antiterminator n=3 Tax=Enterococ... 226 1e-57 UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_... 226 1e-57 UniRef50_Q8EMT4 Hypothetical conserved protein n=1 Tax=Oceanobac... 225 2e-57 UniRef50_Q184X1 Transcription antiterminator n=6 Tax=Clostridium... 225 2e-57 UniRef50_Q3XZH6 Transcriptional antiterminator bglG:Phosphoenolp... 225 2e-57 UniRef50_UPI000196BD9B hypothetical protein CATMIT_02553 n=1 Tax... 225 3e-57 UniRef50_B1CBZ7 Putative uncharacterized protein n=1 Tax=Anaerof... 225 3e-57 UniRef50_C9A1R6 Predicted protein n=4 Tax=Enterococcus RepID=C9A... 224 4e-57 UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Ba... 224 5e-57 UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdema... 224 5e-57 UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_... 223 7e-57 UniRef50_A0AFI1 Complete genome n=2 Tax=Listeria RepID=A0AFI1_LISW6 223 9e-57 UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdema... 222 2e-56 UniRef50_C0CTD3 Putative uncharacterized protein n=1 Tax=Clostri... 222 2e-56 UniRef50_B0NXI9 Putative uncharacterized protein n=1 Tax=Clostri... 222 2e-56 UniRef50_B0MFY1 Putative uncharacterized protein n=1 Tax=Anaeros... 222 2e-56 UniRef50_A9B4K3 Transcriptional antiterminator, BglG n=1 Tax=Her... 222 2e-56 UniRef50_C4ZB72 PRD/PTS system IIA 2 domain protein n=1 Tax=Euba... 221 3e-56 UniRef50_C9A391 Transcriptional antiterminator n=1 Tax=Enterococ... 221 3e-56 UniRef50_B0MBK6 Putative uncharacterized protein n=1 Tax=Anaeros... 221 3e-56 UniRef50_C7TGH5 Transcription antiterminator, BglG family / PTS ... 221 4e-56 UniRef50_C9AYJ5 Transcriptional antiterminator n=4 Tax=Enterococ... 221 4e-56 UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collins... 221 4e-56 UniRef50_A6LQT2 Transcriptional antiterminator, BglG n=1 Tax=Clo... 221 4e-56 UniRef50_C3WG94 Predicted protein n=1 Tax=Fusobacterium mortifer... 221 4e-56 UniRef50_C4L1U1 Transcriptional antiterminator, BglG n=1 Tax=Exi... 220 6e-56 UniRef50_C9A0D6 BglG family transcriptional antiterminator n=1 T... 220 6e-56 UniRef50_C7T7M7 Transcription antiterminator, BglG family / PTS ... 220 7e-56 UniRef50_C2FLI0 BglG family transcriptional antiterminator n=2 T... 220 9e-56 UniRef50_C0CS52 Putative uncharacterized protein n=1 Tax=Blautia... 220 9e-56 UniRef50_C9B288 Predicted protein n=2 Tax=Enterococcus casselifl... 219 1e-55 UniRef50_D2EIK0 Transcription regulator n=1 Tax=Pediococcus acid... 219 1e-55 UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostri... 219 2e-55 UniRef50_D1ARA3 PTS modulated transcriptional regulator, MtlR fa... 219 2e-55 UniRef50_C5F6Y5 Predicted protein n=2 Tax=Lactobacillus paracase... 218 2e-55 UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdema... 218 2e-55 UniRef50_UPI0001C35023 transcriptional antiterminator, BglG n=1 ... 218 3e-55 UniRef50_A8AYR4 Transcription antiterminator BglG family n=1 Tax... 218 3e-55 UniRef50_D0DS13 BglG family transcriptional antiterminator n=1 T... 218 3e-55 UniRef50_C0X3T6 BglG family transcriptional antiterminator n=22 ... 218 4e-55 UniRef50_A4VY33 Transcriptional antiterminator n=33 Tax=Streptoc... 218 5e-55 UniRef50_A6NQL9 Putative uncharacterized protein n=1 Tax=Bactero... 217 5e-55 UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR fa... 217 5e-55 UniRef50_C7CWS4 Transcriptional antiterminator bglG n=39 Tax=Ent... 217 6e-55 UniRef50_D1AIW4 PTS modulated transcriptional regulator, MtlR fa... 217 6e-55 UniRef50_C9AU45 BglG family transcriptional antiterminator n=2 T... 217 7e-55 UniRef50_A8UBU9 Transcription regulator, mannitol operon n=1 Tax... 217 8e-55 UniRef50_C4FVQ8 Putative uncharacterized protein n=1 Tax=Catonel... 217 8e-55 UniRef50_C3WAH3 PRD domain-containing protein n=1 Tax=Fusobacter... 216 8e-55 UniRef50_B6FXG1 Putative uncharacterized protein n=1 Tax=Clostri... 216 9e-55 UniRef50_B0NY60 Putative uncharacterized protein n=1 Tax=Clostri... 216 1e-54 UniRef50_UPI000196A9D7 hypothetical protein CATMIT_00535 n=1 Tax... 216 2e-54 UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactoba... 215 2e-54 UniRef50_B2TIY2 Putative transcription antiterminator n=3 Tax=Cl... 215 3e-54 UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostri... 215 3e-54 UniRef50_C5R8Q6 BglG family transcriptional antiterminator n=1 T... 215 4e-54 UniRef50_C7T9J5 Transcription antiterminator BglG family protein... 214 4e-54 UniRef50_UPI0001C35E6F mannitol operon transcriptional antitermi... 214 5e-54 UniRef50_D1AIK5 Transcriptional antiterminator, BglG n=1 Tax=Seb... 214 7e-54 UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostri... 214 7e-54 UniRef50_D1AH38 PTS modulated transcriptional regulator, MtlR fa... 213 9e-54 UniRef50_B9DT71 Transcriptional regulator (Antiterminator) n=1 T... 213 9e-54 UniRef50_C2BXP0 Transcription antiterminator n=1 Tax=Listeria gr... 213 1e-53 UniRef50_D0BLL7 PRD domain-containing protein n=2 Tax=Granulicat... 213 1e-53 UniRef50_B1CBL8 Putative uncharacterized protein n=1 Tax=Anaerof... 213 1e-53 UniRef50_A4VZ09 Transcriptional antiterminator n=9 Tax=Lactobaci... 212 2e-53 UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaeros... 212 2e-53 UniRef50_C7TGF2 Transcription antiterminator BglG family protein... 212 2e-53 UniRef50_Q67QV8 Transcription antiterminator BglG family n=1 Tax... 212 2e-53 UniRef50_B0M974 Putative uncharacterized protein n=1 Tax=Anaeros... 211 3e-53 UniRef50_A5Z3Q0 Putative uncharacterized protein n=1 Tax=Eubacte... 211 3e-53 UniRef50_C2C385 BglG family transcriptional antiterminator n=1 T... 211 4e-53 UniRef50_Q03C88 Transcriptional antiterminator and PTS system co... 211 4e-53 UniRef50_C5ERF8 Predicted protein n=1 Tax=Clostridiales bacteriu... 211 4e-53 UniRef50_B0NYU6 Putative uncharacterized protein n=2 Tax=Clostri... 211 5e-53 UniRef50_D1AKT2 Transcriptional antiterminator, BglG n=1 Tax=Seb... 210 8e-53 UniRef50_C7WZJ5 Predicted protein n=7 Tax=Enterococcus RepID=C7W... 210 8e-53 UniRef50_C4VFI2 HTH domain protein n=23 Tax=Enterococcus faecali... 210 1e-52 UniRef50_D1AQE8 Transcriptional antiterminator, BglG n=1 Tax=Seb... 209 1e-52 UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdema... 209 1e-52 UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clo... 209 2e-52 UniRef50_B0N368 Putative uncharacterized protein n=1 Tax=Clostri... 209 2e-52 UniRef50_D1AJW2 Transcriptional antiterminator, BglG n=1 Tax=Seb... 208 2e-52 UniRef50_C0X124 PRD/PTS system IIA 2 domain protein n=3 Tax=Ente... 208 3e-52 UniRef50_C2JT05 Transcriptional antiterminator n=1 Tax=Lactobaci... 208 4e-52 UniRef50_C7XVA0 Transcriptional antiterminator n=2 Tax=Lactobaci... 207 5e-52 Sequences not found previously or not previously below threshold: >UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_BACHD Length = 701 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 77/424 (18%), Positives = 172/424 (40%), Gaps = 13/424 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 SA +R+ +++ L + + GV + DI E L L L Sbjct: 86 YEYSAQERKAWVVIYLLTRLEPLFLEHLMDRTGVSRNTTIDDIKCLKDE-LNNFHLALEF 144 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT- 127 Y + G ++R L ++L + ++ +P +R R F + Sbjct: 145 ERKDGYTISGDETDKRKALVYYLSQAL--PQQNWETELSPIRIFLRTKRDNGRIFTIEEL 202 Query: 128 -NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + +++ + L+ ++ +H L L + + G + +PL+++ + E++ Sbjct: 203 QKVYDVISESEKVLKIQYTDDVLHSLSLRFLLFMKRVAKGKFIKVHPLEKQVLKGTKEYE 262 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPL--RDAHQRDRQLRQSIKRLVNH 244 A+ + ++ P +E L++ ++ ++ + ++L + +VN Sbjct: 263 AAKVMSFKLEQAFGVHYPDEEVLYLTTHILSSKINYANGEIESRKESQELTHIVTSMVND 322 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F++ V F +++ L L+ H+ A R + + ++N + E YP L TR + Sbjct: 323 FQKYACVVFEEKELLEKNLFFHIKPAFYRIKYGLEVENNIAESIKTSYPELFLLTRKVVH 382 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLREL 362 E G ++D E + + F W+ +E + K+ +++ N ++ QL L Sbjct: 383 YLERYVGKSVNDNEVAFITMHFVGWMRREGTIPTKRKKALIVCANGVGTSQFLKNQLEGL 442 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 IK S++ + +T P II+ ++P + P+ + LT ++E++ K Sbjct: 443 FPAVDIIKTCSIREYEKT--PVEVDFIISTTSIP--EKNVPIFIVNPILTETEKERLLKS 498 Query: 423 LESA 426 + A Sbjct: 499 VHVA 502 Score = 84.8 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 34/327 (10%), Positives = 79/327 (24%), Gaps = 41/327 (12%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG- 69 +S QR IL L + ++ V D+ + L L Sbjct: 1 MSLDQRSTFILTQLLHARSYLPIQELTQKLNVSRRTVYNDLEKI-NSWLEEQGLKAVYKV 59 Query: 70 YDGSYRVEGTVLNQ-------RLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 + + R + +++ L+ + R Sbjct: 60 RSQGLIL--DERAKEEIPTKLRSLKSWHYEYSAQERKAWVVIYLLTRLEPLFLEHLMDRT 117 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + L +L + G T + +R Sbjct: 118 GVSRNTTIDDIKCLKDELNN-----------FHLALEFER-KDGYTISGDETDKR----- 160 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 + + + + Q E + + R + + Q + ++ Sbjct: 161 ------KALVYYLSQALPQQNWETELSPIRIFLRTKRDNGRIFTIEE-----LQKVYDVI 209 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + ++ +++ D+ + L + R I E+ + + Sbjct: 210 SESEKVLKIQYTDD--VLHSLSLRFLLFMKRVAKGKFIKVHPLEKQVLKGTKEYEAAKVM 267 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAW 329 E +GVH DEE + + Sbjct: 268 SFKLEQAFGVHYPDEEVLYLTTHILSS 294 >UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR family n=5 Tax=Geobacillus RepID=C9RTD1_GEOSY Length = 696 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 62/423 (14%), Positives = 149/423 (35%), Gaps = 15/423 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 + +R+ I + L + + + + V SLD+ + + + + L+L Sbjct: 85 HEYTPEERQLMIFIALLEANEPVKLVSLATDLNVTVATVSLDLDKVEQTVEA-YGLSLIR 143 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY---- 124 + G+ +R + L R + T +++ +A Sbjct: 144 KRGYGVELAGSESAKRRLMSDLLFRHVDEHEFLALMKETIQKRADAPLDTVAEKLLGLVD 203 Query: 125 --DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + ++ + +L ++L + + G F+P + ++ Sbjct: 204 RKKLSIIEQQIERVKEKLPFTMADSSYIAFVVHLALAIERIKQGEAIHFDPRDLQALQAT 263 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-DRQLRQSIKRL 241 E+++A+ + +R +P +E +M + + + + ++L Sbjct: 264 KEYEIARVLAESLERAFGIDIPNEEVGYMTMHLMGAKWRSRQGAMMEEPSLAVGMKAQQL 323 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 + + V ++ L + L HL AL R +G+ N L ++ + Y L Sbjct: 324 IRFVSDKLGVDLSTDRTLYEDLVVHLKPALYRLEHGMGVANPLLDQIKQDYAELFAIVAD 383 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRE 361 + + DEE G + + F A LM+E +++++ + + +L++ Sbjct: 384 GARQL--FGDIPVPDEEIGYLVLHFAAALMREKKG--WRVLVICSSGLGTAKMLATRLKK 439 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 ++++ S + L+I+ +P P I LT + +IR+ Sbjct: 440 EIPDIVSLEQASAFEWRGKDVSA-YDLVISTVPLPEEYG--PHIVVSPMLTEEEARKIRE 496 Query: 422 MLE 424 LE Sbjct: 497 CLE 499 >UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D94 Length = 696 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 81/430 (18%), Positives = 152/430 (35%), Gaps = 24/430 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 LS +R + L L + +EL V D++ E ++ +L +T Sbjct: 76 QYYLSPRERLAWMSLYLLSAESPLFVHHLTELLQVSRGTVLKDLNMVRSE-MKSVKLKVT 134 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWL---------RRGFRLCPSFITSQFTPALKSELKRRG 118 Y V+G ++R L H+ + F L P P L ++ G Sbjct: 135 YDRKRGYGVQGEERDKRKTLSHYFGQIFGHAGWEQAFNLNPESGVPDLAPLLFPPMEEGG 194 Query: 119 IARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + + + L++ L + L + + + +R Sbjct: 195 LEQVY-------RLISDSEITLGVDLTDEMLFHLTARFLLYVRRIQTAQWVSIDDDERSV 247 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP--DPLRDAHQRDRQLRQ 236 E++ A I + VP DE + A+ RV + + + + +QLR Sbjct: 248 LRRTPEYEAAARIAEGLGQMFGVSVPDDEVCYFAMHLLGARVNRMEQMTGSEEVLKQLRN 307 Query: 237 SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 + +HF+ V + + + + L HL A R L+ + ++N L E Y + Sbjct: 308 VTTEMTDHFQRYACVFLPNREAMEENLLVHLKPAYYRILYGLSLENPLLENIRSKYGEVF 367 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ--IILLTGNDSEREAQ 354 TR + A FE G L D E G +A+ FG WL +EN + ++ N Sbjct: 368 ELTRRSAAPFEQLVGRKLDDHEIGYLAMHFGGWLRRENTKPAVRRQAAIVCVNGISASRM 427 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 ++ QL L +S++ + I + +P P++ + L+ Sbjct: 428 LKSQLENLFSAVDITAVLSLRDYESFRE-EDVDFIFSTVPLP--DSKVPVLLVNPILSDK 484 Query: 415 QQEQIRKMLE 424 +E + + Sbjct: 485 DKEHLLNQIN 494 Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 83/318 (26%), Gaps = 40/318 (12%) Query: 21 LLTLFQPG-LTATMATFSELNGVDDDIASLDISETGREILRYHQL-TLTTGYDGSYRVEG 78 +LTL ++ + G+ D+ + + L+ QL ++ Y + Sbjct: 1 MLTLLHEAADYVSLEELMQKLGISRRTVYYDMEKI-NDWLKAVQLPSVQYVRTAGYYL-- 57 Query: 79 TVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN-LCS 137 + R L + + + L + T L + Sbjct: 58 PEES-RAGLPQLNEKPHAQQYYLSPRERLAWMSLYLLSAESPLFVHHLTELLQVSRGTVL 116 Query: 138 RRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQR 197 + L L + + G Q +R S Q+ G W++ Sbjct: 117 KDLNMVRSEMKSVKL----KVTYDR-KRGYGVQGEERDKRKTLSHYFGQIFGHAG--WEQ 169 Query: 198 RALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQ 257 P +A L + + + RL++ V ++ Sbjct: 170 AFNLN-PESGVPDLAPLLFP-----------PMEEGGLEQVYRLISDSEITLGVDLT-DE 216 Query: 258 GLCDQLYTHL--AQALN--RSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 L HL L R A + ID+ R G +G Sbjct: 217 MLF-----HLTARFLLYVRRIQTAQWVSIDDDERSVLRRT--PEYEAAARIAEGLGQMFG 269 Query: 312 VHLSDEESGLVAVIFGAW 329 V + D+E A+ Sbjct: 270 VSVPDDEVCYFAMHLLGA 287 >UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5DAC1_GEOSW Length = 709 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 92/424 (21%), Positives = 172/424 (40%), Gaps = 13/424 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 +A +R+ + + L + SE V + D+ + R L+ QLTL Sbjct: 86 YQYTAKERQAWLAIYLLVKDQQLFLEDLSEKTRVSRNTTIEDLKKL-RAQLKSFQLTLYF 144 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 Y ++G N+R + ++L + LK L +N Sbjct: 145 NRQTGYLIKGKEENKRKAIVYYLS--LVIPNQQDWQTVLANLKRLLLPDKDEQNMVILAE 202 Query: 129 LQ---ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 L+ ++N C + L +F +H L L + G +F+P+++ + EF Sbjct: 203 LKCILNILNECEKDLNIQFADDVLHHLALRFWLFGKRIVQGKKIEFDPIEKEVIQQTREF 262 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD--PLRDAHQRDRQLRQSIKRLVN 243 + A++ + + +P DE ++A +V H +L+ ++++V Sbjct: 263 EAAKKASKKLESIFQTSIPDDEVYYLATHLLSTKVQYFGNTIQGHDDYGKLKHIVQKMVT 322 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F+ V F + Q + L HL A R + + ++N L E Y L T+ + Sbjct: 323 EFQAFACVTFPNRQEVEKNLLLHLKPAYYRIKYGLQVENPLVELIKTKYKDLFLITKKVI 382 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLRE 361 FE+ G +SDEE+ L+A+ FG WL +E K+ IL+ N A + QQL Sbjct: 383 HHFETAIGKKVSDEETALIALHFGGWLRREGIQPKERKRAILICANGIGTSAILRQQLEG 442 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 L ++ +SV+ + + P + A T+ + P+ + LT ++E + K Sbjct: 443 LFSTVDFVETISVRDYEKRDFP---DIDFAVSTVAVSKKKHPVFVVNPILTDQEKETLLK 499 Query: 422 MLES 425 + + Sbjct: 500 KVHA 503 >UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan operon n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKS9_BACSK Length = 649 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 67/424 (15%), Positives = 145/424 (34%), Gaps = 19/424 (4%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 + +S +R ++ L + ++ + D+ + IL + L + Sbjct: 93 HGAPISPEERVTWLIQKLLLAEEYIKLDDLADDLFISKSSLQNDLKN-AKLILARYGLQV 151 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 T + ++G L +R C+ ++ + + Q T +K E Sbjct: 152 ATRPNYGLYLKGDELKRRFCMAEYVFERKNVAADLTSLQLTAFMKEEQL----------- 200 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 ++ ++ + I+ L +++ + AG S E+ Sbjct: 201 ADIWDILVTTMQENGVTLSDIAINNLFIHIVIAFKRIEAGHHISLYRKDMSDICSQHEYY 260 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-----DRQLRQSIKRL 241 VAQ++ P E ++A+ R+ A+ D + + K + Sbjct: 261 VAQKMIARLNTHLGVSFPEMEIAYIAIHLLGTRLVAENEQANDNLKKVFDDEYYKLAKAI 320 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 V ++ ++Q L L HL A+NR + + I N + + + Y Sbjct: 321 VEKVERELDLNIANDQELLVSLMLHLKPAINRYRYGMNIRNPMLADIKQHYTLAFEAAVI 380 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREAQIEQQLR 360 A + + G+ + + E G +A+ GA L + N E K+I+++ + ++ +L Sbjct: 381 GQAVIKDKLGISIDENEIGYLALHIGAALERRNQQKEPKRILIVCASGRGSAQLLKYKLE 440 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 L I + + LI+ + P++ + L T E+I Sbjct: 441 ANFKKRLFIVDTTEYYQIDQADLTNIDLIVTSIPIK-KKMPVPVVEVNTILGTEDLERIE 499 Query: 421 KMLE 424 L Sbjct: 500 IQLR 503 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 93/317 (29%), Gaps = 41/317 (12%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 QR IL L T + +N V D+ + E L + + Y Sbjct: 13 QRLQSILRELLGTQGYVTSRYLASVNQVTPRTVREDVKQLQTE-LANIHAGIESVPGKGY 71 Query: 75 RVEG-TVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 ++ R L + + +++ +A + +L + Sbjct: 72 KLTIEDEAQFRQFL-----QRETTGNHGAPISPEERVTWLIQKLLLAEEYIKLDDLADDL 126 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 + LQ ++ + LQ + + G+ + + L+RR+ E+ Sbjct: 127 FISKSSLQNDLKNAKLILARYGLQVA-TRPNYGLYLKGDELKRRF--CMAEYVF------ 177 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 E +A + L++ +++ D I ++ + V Sbjct: 178 -------------ERKNVAADLTSLQLTAFMKEEQLAD------IWDILVTTMQENGVTL 218 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPE--EFARLYPRLVRTTRAALAGFESEYG 311 D + L+ H+ A R I + + + + +A + G Sbjct: 219 SD--IAINNLFIHIVIAFKRIEAGHHISLYRKDMSDICSQH--EYYVAQKMIARLNTHLG 274 Query: 312 VHLSDEESGLVAVIFGA 328 V + E +A+ Sbjct: 275 VSFPEMEIAYIAIHLLG 291 >UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Clostridia RepID=B0K247_THEPX Length = 705 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 69/429 (16%), Positives = 149/429 (34%), Gaps = 10/429 (2%) Query: 1 MMPTLA-PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREIL 59 ++ L LS +R IL L Q T+ + ++ V D+ + RE L Sbjct: 85 LLDNLNIYYYNLSQKERVNIILSELIQQKDYITINSIADKLMVSRSTIIKDLKDV-REWL 143 Query: 60 RYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQ---FTPALKSELKR 116 H L L + +V G R L + + + +T + K+ Sbjct: 144 TRHGLQLKSAPKYGIKVVGDEKRLRRAAIELLTEAIDVDKALDIVKSPIYTRSSVGIDKQ 203 Query: 117 RGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQR 176 D ++ + + R L+ F L +++ + + G + Sbjct: 204 ITKLFEDIDIPYIEECIQIAERELETVFSDAAFSGLVIHIAIAIKRIQLGKDIIMPKEEL 263 Query: 177 RWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQ 236 + E EF VA I + + +P DE ++ + V ++ + + Sbjct: 264 KALEITKEFAVASNIAKMLEDHFKVSIPLDEIGYITVHLLGSNVSKTRPYPNENWVEYQL 323 Query: 237 SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 ++++ + + ++ L + L HL + R + + N + +E Y L Sbjct: 324 LTEKIITNVTNKIHQDLSGDRQLFEGLLDHLRPTVYRLKHGLKLKNPILDEIKANYKELF 383 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREAQ 354 + +L E G L+DEE G + FGA + + + I+++ G Sbjct: 384 EIVKESLKPLEDYTGKALNDEEIGYFTIHFGAAIERLKVTKAPKPNILVVCGTGIGTAKL 443 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 + +L+ + + ++ + + LI++ +P I + LT Sbjct: 444 LSSRLQSVF-DVNIVDAVAYHQVKERLKEKDIDLIVSTVPIPYE--GIKTIEVNPLLTEK 500 Query: 415 QQEQIRKML 423 E ++ ++ Sbjct: 501 DIELLKDLV 509 Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 92/335 (27%), Gaps = 42/335 (12%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQL- 64 +++ +R QIL+ L ++ +++ V D+ E L+Y+ L Sbjct: 2 KEVIIITLNERCTQILIRLINSNAPIKISDLAKIFNVSSRTIRYDLDTI-DEFLKYNNLP 60 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 L + + +L R + L + + + SEL ++ Sbjct: 61 QLIRKPNVGVKFS-ELLEYRNKVLSLLDNLNIYYYNLSQKERVNIILSELIQQKDYITIN 119 Query: 125 DDTNLQALVNL-CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 + + + L+ +L + G+ + P Sbjct: 120 SIADKLMVSRSTIIKDLK-----DVREWLTRH----------GLQLKSAPKYGIKVVG-D 163 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS------ 237 E ++ + +++ P R + D+Q+ + Sbjct: 164 EKRLRRAAIELLTEAIDVD----------KALDIVKSPIYTRSSVGIDKQITKLFEDIDI 213 Query: 238 --IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFAR-LYPR 294 I+ + F D L H+A A+ R I EE + Sbjct: 214 PYIEECIQIAERELETVFSD--AAFSGLVIHIAIAIKRIQLGKDIIMP-KEELKALEITK 270 Query: 295 LVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAW 329 E + V + +E G + V Sbjct: 271 EFAVASNIAKMLEDHFKVSIPLDEIGYITVHLLGS 305 >UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXJ3_9BACL Length = 696 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 77/428 (17%), Positives = 158/428 (36%), Gaps = 10/428 (2%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 LS+ +R+ + L L + L V A ++ +E L Sbjct: 67 QSVQPQQYYLSSGERKALLCLRLVNRSTPLFLHDMEALLQVSRGTAHAELKRLKKE-LED 125 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALK--SELKRRGI 119 + L++ Y ++G + R L +L +S L +R Sbjct: 126 YALSIQFDRKQGYFIQGNEKDIRAVLSRFLFEQLSYADWNPSSPAFDGLIHTDLFRRHFP 185 Query: 120 ARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 A + ++ ++ +++ + I L L + + G T Q ++ Sbjct: 186 AFREEELDSVYRIIVSTEQQIGMEWTDETILHLTLRIWLSANRMKQGRTVQLEEEEKAAL 245 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD-PLRDAHQRDRQLRQSI 238 L+F+ A +I R VP DE ++A+ +V + ++LR + Sbjct: 246 RETLQFKAATQIADELGERFDLRVPEDEIGYLAIYLLAAKVNRVEVESDTWETKRLRAAT 305 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 + +++ F + G V F + + L QL+ H+ R + + IDN L ++ Y + Sbjct: 306 EEVIDLFAKNGCVYFQNREALVKQLFLHVKSMFYRIKYGLTIDNPLTDKILEEYREVYEL 365 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIE 356 TR + + E + L E + + FG WL +E H K+ ++ N ++ Sbjct: 366 TRKSASPLERLFEKPLGRHEIAYLTMHFGGWLKREQAKTEHRKRAAVVCVNGVSASRLLK 425 Query: 357 QQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQ 416 QL +L + +S++ F + P LI + PL P+ + ++ ++ Sbjct: 426 NQLEQLFPSLDLVAVLSLREFEKFTDP--VDLIFSTV--PLSGCQVPVFILNAVMSDAEK 481 Query: 417 EQIRKMLE 424 + + Sbjct: 482 THLLSRVN 489 Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 78/311 (25%), Gaps = 37/311 (11%) Query: 26 QPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT-LTTGYDGSYRVEGTVLNQR 84 Q ++ ++ V D+ + LR L + + + + R Sbjct: 4 QTPGYLSVQELMDVFHVSKRTIYYDMDKI-NHWLRQGGLAPVQYVRGRGFLL--PEAS-R 59 Query: 85 LCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL----VNLCSRRL 140 L + + + L L R +D L + + +RL Sbjct: 60 SQLPSMAQSVQPQQYYLSSGERKALLCLRLVNRSTPLFLHDMEALLQVSRGTAHAELKRL 119 Query: 141 QKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRAL 200 +K E L + G Q N R S + Sbjct: 120 KKELEDYA-------LSIQFDR-KQGYFIQGNEKDIRAVLSRF-------LFEQLSYADW 164 Query: 201 QPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLC 260 P P + P + + R++ + + + DE L Sbjct: 165 NPSSPAFDGLIHTDLFRRHFPAFREEELDS-------VYRIIVSTEQQIGMEWTDETIL- 216 Query: 261 DQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEE 318 L + + NR + ++ + + + + ++E Sbjct: 217 -HLTLRIWLSANRMKQGRTVQLEEEEKAALRET--LQFKAATQIADELGERFDLRVPEDE 273 Query: 319 SGLVAVIFGAW 329 G +A+ A Sbjct: 274 IGYLAIYLLAA 284 >UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8I8_BREBN Length = 701 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 67/425 (15%), Positives = 152/425 (35%), Gaps = 14/425 (3%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 +A +R+ IL L + + + + V S D+ + +L + L+L Sbjct: 86 EYTAQERKAIILCALLEASEPVKLISLAIDLKVTTATISHDLDDLET-MLARYDLSLLRK 144 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFR------LCPSFITSQFTPALKSELKRRGIARNF 123 ++GT ++R + + + I ++ + S +R + Sbjct: 145 RGYGVELQGTESSKRRAISRLIAEHLDDHELIGIIKENIQNKALRDIDSIAERLLGLIDR 204 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 ++ ++ L L +L + + G F+ Sbjct: 205 EKLIKVENALSHLDEELPYPLADSAYLGLVTHLALAMERIEKGEGIHFDEHTLSELNGTP 264 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQRDRQLRQSIKRLV 242 E+++A I ++ +P DE ++ + ++ P + +L KR + Sbjct: 265 EYEIASNIMERLKQIFQMEIPADEIGYITMHLRGAKLRHSPDDQVWPENTELMVITKRFI 324 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 E ++ ++ L L THL AL R + I N + E+ + YP L T A Sbjct: 325 QACEERLDIPLSNDASLFHGLLTHLEPALYRLQRKMEIRNPILEQIKQNYPELFAVTSEA 384 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREAQIEQQLRE 361 + + + DEE G + + GA L + + + +++ + + ++++ Sbjct: 385 VHTI--LPELRVPDEEIGYLVMHLGAALERTRHEQQWYRALVVCSSGIGSSKILATRIKK 442 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 +++K++S+ + A LII+ +PL + L ++I+ Sbjct: 443 EIPEIVSLKNLSMFDLEEVPA-TDYDLIISTLPLPLDPAE--YVVVSPLLPPDDIQKIKY 499 Query: 422 MLESA 426 L + Sbjct: 500 QLHTT 504 >UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Geobacillus RepID=C9RTV4_GEOSY Length = 714 Score = 320 bits (821), Expect = 7e-86, Method: Composition-based stats. Identities = 83/422 (19%), Positives = 166/422 (39%), Gaps = 8/422 (1%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 S +R ++ + L + SE V + D+ + R L QLTL Sbjct: 85 NYAYSKKERLARLAIHLLVEEPPHFLKDLSEKTKVSRNTTIKDLKKL-RAQLNSFQLTLC 143 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 Y ++G ++R + ++L ++ T + Sbjct: 144 FTRYTGYVIKGKEEDKRRAIVYYLSLVIPHQQNWQTVLANLKRLLIHDEDESTTVLSELR 203 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 N+ ++N C + L +F ++ L L + G F+P+++ + EF+ Sbjct: 204 NILDVLNECEKNLNIQFADDVLYHLALRFWLFGKRIVQGKKIDFDPVEKEVIQQTKEFEA 263 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD--PLRDAHQRDRQLRQSIKRLVNHF 245 AQ + +P DE ++A +V +H + L+ ++++V F Sbjct: 264 AQTARSKLESIFQTSIPDDEVYYLATHLLSSKVQYSGNSLQSHDDYKNLQNIVQKMVTEF 323 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + F + + + + L HL A R + + ++N + E Y L T+ + Sbjct: 324 QAFTCITFPNRKAVEENLLLHLKPAYYRIKYGLQVENPMIELIKTKYKDLFLITKKVIHH 383 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLRELT 363 FE+ G +SDEE+ L+A+ FG WL +E K+ IL+ + + +QL L Sbjct: 384 FETAIGKKVSDEEAALIAIHFGGWLRKEGIQPKERKRAILICASGIGTSTILRKQLEGLF 443 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ +SV+ + Q + A T+P+ P+ + LT ++E + K + Sbjct: 444 STVDFVETISVRDYEQRDFH---DIDFAVSTVPVSKKKHPVFVVNPILTDQEKETLLKKV 500 Query: 424 ES 425 + Sbjct: 501 HA 502 >UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJT4_9FIRM Length = 705 Score = 316 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 143/432 (33%), Gaps = 21/432 (4%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 + + QR+ + L Q + + + + V D S D+ + L+ L L Sbjct: 83 ETAAYTPQQRQIILAGQLLQATEPIKLFSLASMLKVTDGTVSHDLDKLES-WLKQRGLLL 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRL--------CPSFITSQFTPALKSELKRRG 118 V+G+ + R L L P T + A + L + Sbjct: 142 VRRPGLGAYVKGSERDIRRALVEILYTNLDEERLLQLFHDPEQGTHKGAGAAEQYLLKLV 201 Query: 119 IARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + +L+ LV+ L L ++L + + + Sbjct: 202 DKQMI---HDLEQLVHEVESGLPHHLSDTAFIGLVVHLSLAIQRMRKKEDIHIDTATLAA 258 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ----RDRQL 234 E+++A+E+ R + VP DE ++ + R D + L Sbjct: 259 LRKRREYRMAKELARRITAQFQTEVPEDEIGYITMHLMGARSFYRKGDDEVVSVMDNFHL 318 Query: 235 RQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPR 294 + + ++ ++ + D + L L HL +++R + I N L EE YP Sbjct: 319 VRMARSIMKCAQQETGRKLLDNKELFLGLVNHLGPSISRLRMHMDIRNPLLEEMRSAYPE 378 Query: 295 LVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSERE 352 L+ A+ E E G L + E +A+ GA L + ++I+ Sbjct: 379 LMELAGKAVKPMEQELGEALPEAEVAYIAMHLGAALAEPHSASRQHVRVIVACQTGMGTS 438 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFL-QTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTL 411 + L++ + +S + A +I+ +P P++ T L Sbjct: 439 RMLAAGLKQAYDTIEIVDLVSALQVNREYVQHTEADFVISTVPIP--WSPLPVVVTTPLL 496 Query: 412 TTHQQEQIRKML 423 + +I + L Sbjct: 497 DQRDKARIDQEL 508 Score = 91.0 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 88/320 (27%), Gaps = 33/320 (10%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R I+ L T T +E GV S ++ + +LR + L L + Sbjct: 6 RAIAIIQCLLDGSDMVTAGTIAEKLGVSSKTVSRELPKVE-LLLRTYGLELLRKTGAGIQ 64 Query: 76 VEGTVLNQRLCLFHWLR-RGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + G L L P L + + V+ Sbjct: 65 ITGDPSKIDLLRQDALNTETAAYTPQQRQIILAGQLLQATEPIKLFSLASMLKVTDGTVS 124 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 +L+ + R + + + G + + R + + + + Sbjct: 125 HDLDKLESWLKQRGL--------LLVRRPGLGAYVKGSERDIRR-------ALVEILYTN 169 Query: 195 W-QRRALQPVPPDEPLFMALLFSMLRVPDPLRDA--HQRDRQLRQSIKRLVNHFRELGNV 251 + R LQ E + D+Q+ +++LV+ Sbjct: 170 LDEERLLQLFHDPEQG-------THKGAGAAEQYLLKLVDKQMIHDLEQLVHEVESGLPH 222 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLF--AIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 D L HL+ A+ R I ID + R R + ++ Sbjct: 223 HLSDTA--FIGLVVHLSLAIQRMRKKEDIHIDTATLAALRKR--REYRMAKELARRITAQ 278 Query: 310 YGVHLSDEESGLVAVIFGAW 329 + + ++E G + + Sbjct: 279 FQTEVPEDEIGYITMHLMGA 298 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 73/430 (16%), Positives = 167/430 (38%), Gaps = 12/430 (2%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + PS +RR IL L Q + FS+ GV S D+ E + I + Sbjct: 76 LDIVGYPSEFETEERRKMILSELLQLNEPVKLEYFSKKFGVTTSTISYDLKELEKWIEKQ 135 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 LTL T + G+ + R + ++L F + K+ +++ R Sbjct: 136 -GLTLITKPGYGVYISGSENSFRKAIANFLYENFDTADLIDFLKTGYLAKNNIEKNIDLR 194 Query: 122 NFYDDT-----NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQR 176 ++ + ++ L ++L + + G T + Sbjct: 195 LLNLIDYDTVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIKRLQNGETIEMGEDNL 254 Query: 177 RWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQ 236 + + E++ A+++ ++ Q P+P DE ++ + + ++ + +D ++ Sbjct: 255 QELKKTNEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAKYRSTTQNYNDKDIEI-- 312 Query: 237 SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 + ++ ++ +V F +++ L D L +HL A+ R + I N L E+ YP L Sbjct: 313 IARDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIRNPLLEDIKTKYPLLF 372 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQI 355 + + + + ++E G +A+ FGA L ++ + +K I+++ + + Sbjct: 373 EKSNRVCDVLRKKLNMDIPEDEVGYIAMHFGAALERKKEAAKKYNIMVVCASGIGTSRML 432 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 +L ++ + S LI++ +PL + ++ + L Sbjct: 433 MSKL-QMFPQINIVDVTSSIKLKDLKGRDDIDLIVST--IPLDIKDKKVVVVNPLLLKED 489 Query: 416 QEQIRKMLES 425 E+++K L + Sbjct: 490 VEKLKKALNT 499 >UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus RepID=Q5KYD3_GEOKA Length = 684 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 80/420 (19%), Positives = 150/420 (35%), Gaps = 20/420 (4%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 + +R+ I L + + F E V DI E + QL L+ Sbjct: 86 YTYQSWERKAWIGLWILTRVHPLYLCDFLEKLQVSRSTLLNDIKELKEDWQ-SFQLQLSF 144 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 Y G + +R + ++ + F L +E Sbjct: 145 HRKKGYFSSGEEIQKRKLMIRYIHQILAAMD---DQHFAAELSAE-----------CQWP 190 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 + + R+ I L +YL + G Q + ++ S E+Q+A Sbjct: 191 IFDWICQFESTFSIRYTGEVIQTLPIYLALFQRRWARGKFVQMDEQEKEVLRSMREYQIA 250 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKRLVNHFRE 247 + R + + +P DE ++ RV D + D + L++ I+ +V+ F+ Sbjct: 251 DHLVRRIENVSQISIPDDEVCYLTTHLLSFRVADDKQMDQNDDITTLKRIIRHMVDDFQT 310 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 V+F + L L H+ A R + + N L E Y L T+ + E Sbjct: 311 YACVQFKRREELEKNLLVHMKPAYYRLKYGFHLQNDLTESVKANYQDLFTLTKKVVHHLE 370 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 S G +SD+E +A+ FG WL +E + K+++++ + +++QL EL Sbjct: 371 SVVGQPVSDDEIAYIAMHFGGWLDREGVSVPVRKKVLIVCESGIGTSRMLQKQLGELLST 430 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 I +S + + ++ PL P+ LTT + + + +E Sbjct: 431 VDVIGVVSAREYDYISLAGHVDFVVTTT--PLQPKDVPVYTVRPILTTEDKMLLLREIEG 488 >UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 Length = 651 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 57/421 (13%), Positives = 137/421 (32%), Gaps = 20/421 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + +R ++ + + +E + D+ E + LR + + L T Sbjct: 87 PIFPDERIDYLMKRMLLADGYLKLDDLAEELFISKSTLQSDLKEVKKR-LRPYDIILETR 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + +++ G L R C+ +L L + D + Sbjct: 146 PNYGFKLRGEELRLRYCMAEYLV------------DDREPEPDLLSEKAGILPKDDIHVI 193 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + + R + ++ L +++ + P + E+Q A+ Sbjct: 194 RTAIMKQVRNHKIPLSFFGLNNLIIHIAIACKRIRTENYVSLIPEDLHDIKLETEYQSAE 253 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQ-----SIKRLVNH 244 I + + P E ++A+ + + + +L + ++ Sbjct: 254 AIVKELESALSVTFPEQETAYIAIHLLGTKRMAQSQLEGKELTRLIDGETSRLTEAMIEA 313 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + D+ L L H+ A+NR+ + + + N + YP A Sbjct: 314 IERELKLGITDDNELKAGLALHIKPAINRNRYGMNLRNPMLSAIKENYPLAFEAGVIAGI 373 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELT 363 + + G+ + + E G +A+ FGA + + K+ +++ + + + ++LR Sbjct: 374 VIKEQTGIDIHENEIGYLALHFGAAIERRKTERPPKRCLIVCASGAGSAQLLREKLRSRF 433 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 L I + L + +++ + L P++ L +I ML Sbjct: 434 AKRLEIVGTADYCSLDQLSFESIDFVVSTVPIKKDLP-VPVLKVHTLLGGGDFTKIDAML 492 Query: 424 E 424 E Sbjct: 493 E 493 >UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D786_9CLOT Length = 673 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 63/424 (14%), Positives = 145/424 (34%), Gaps = 28/424 (6%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++ +R +L L T+ S++ + S D+ E + IL + L L Sbjct: 113 PSTSEERVEYLLNDLLSRRDYVTIDALSDILYISRKTISADLKEVEK-ILEAYSLKLAKR 171 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + R+EGT N+RLC+ + + +SE G A + + T + Sbjct: 172 PNYGIRIEGTEFNRRLCIANIII----------------GKESEALAEGEAEHQENMTRV 215 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 V S L +++ + + + ++ E+++AQ Sbjct: 216 ARCVAEVIDTENFTVNSVAYQNLIVHICIAVQRIQENCYVPLDEERQERIRRSKEYRIAQ 275 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDA-------HQRDRQLRQSIKRLV 242 +I + P E ++A+ + + + + + +++ Sbjct: 276 KITERLNQSFAIRFPDQEIAYIAIHLAGKQSLFLPEQERTGEAGGQVISEETWEVVSQML 335 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + E F + L L H+ R + + + N L ++ +P + Sbjct: 336 DAVYEAFLFDFRSDLELRMNLAQHIVPLAVRLQYNMKLKNPLLKDIKARFPMAYAIALHS 395 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQLRE 361 + YG L D+E G +A+ F + ++N +L +K I+++ + + + R+ Sbjct: 396 SSILTERYGHELKDDEVGYLALAFALAIERQNTELPKKNILIVCASGKGSAQLLHYRYRQ 455 Query: 362 LT-LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 I+ V + + + + P+ L + + ++ Sbjct: 456 EFGSYVGRIETCDVSNVKKVDF-KDIDYVFTTVPIQ-EKVPVPVQEVKYFLESADIQNMK 513 Query: 421 KMLE 424 K+L Sbjct: 514 KVLR 517 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 71/302 (23%), Gaps = 47/302 (15%) Query: 32 TMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWL 91 T + V I E + + + + + Y + Sbjct: 44 TAEALAGKLKVSTKTIRNYIKEW-NDWFDGYGAQIRSKHGCGYFL--------------- 87 Query: 92 RRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHF 151 + + +L R T+ + + L + L +R + I Sbjct: 88 --------DIADQEAFDSRLKQLTARTHTSGQVPSTSEERVEYLLNDLLSRR-DYVTIDA 138 Query: 152 LCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDE---P 208 L L T + + ++A+ + E Sbjct: 139 LSDILYISRK------TISADLKEVEKILEAYSLKLAKR------PNYGIRIEGTEFNRR 186 Query: 209 LFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLA 268 L +A + + + + + + F L H+ Sbjct: 187 LCIANIIIGKESEALAEGEAEHQENMTRVARCVAEVIDTE---NFTVNSVAYQNLIVHIC 243 Query: 269 QALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIF 326 A+ R + +D E R + R + + + D+E +A+ Sbjct: 244 IAVQRIQENCYVPLDEERQERIRRS--KEYRIAQKITERLNQSFAIRFPDQEIAYIAIHL 301 Query: 327 GA 328 Sbjct: 302 AG 303 >UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=Thermoanaerobacter RepID=B0KCF7_THEP3 Length = 652 Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats. Identities = 63/431 (14%), Positives = 153/431 (35%), Gaps = 16/431 (3%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 +L S R+ IL LF + T +E V D+ + L Sbjct: 79 SLDFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSRVTIHKDLQSVEK-WLNKFN 137 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWL--RRGFRLCPSFITSQFTPALKSELKRRGIAR 121 L L + V G N R + + + + F+ + +T + + Sbjct: 138 LKLLKKPNYGIEVVGDEENWRNAVASLIVSTKEQKELKEFLYNDYTGRIDYRTLMQLREL 197 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 D L+ +V+ +L+ RF L +++ + + + + + Sbjct: 198 FDIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLKHKKDVKLSKAVLNNLKQ 257 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK-- 239 E+ +AQ++ + + + +P E ++ L ++ + + + +SI+ Sbjct: 258 KDEYVIAQQMAKEIEAKFNVVLPESEIGYIVLHIIGTKMQQNKIEDVNLELEDEESIELA 317 Query: 240 -----RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPR 294 ++N ++ +++ L + L HL +NR + + + N L + YP Sbjct: 318 VIMSKEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYGLTLRNPLLNDIKENYPE 377 Query: 295 LVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQ 354 + FE G +++EE G +A+ GA + + + +++ Sbjct: 378 IYGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAAVERAK--KPLKALVVCTTGIGTAQL 435 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 + +L + +S + L ++I+ + + + P I LT + Sbjct: 436 LAARLEKSFKQIEIKDIVSSVS-LHESILNDIDIVISTVPIEI---NKPFINISPLLTQN 491 Query: 415 QQEQIRKMLES 425 +++ + +++ Sbjct: 492 DIKRLDEFIQA 502 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 37/336 (11%), Positives = 98/336 (29%), Gaps = 42/336 (12%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R +I+ L T+ + V + D+ + E ++ + + Sbjct: 2 DRILEIINMLLNSEQPLTVDYIANTLKVSNKTIRNDLKKAE-EFVQQKGVKIIKKPRVGI 60 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELK--------RRGIARNFYDD 126 +EG N++L L +++ F + L + + Sbjct: 61 VLEGP-RNKKLELVDEIKKSLDFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSR 119 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + + + L +F + + + + W + Sbjct: 120 VTIHKDLQSVEKWLN-KFNLKLLK-------------KPNYGIEVVGDEENWRNAVASLI 165 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 V+ + + + F+ ++ L + + ++++V++ Sbjct: 166 VSTKEQKELKE------------FLYNDYTGRIDYRTLMQLRELFDIDYKQLEKIVSNAE 213 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLF--AIGIDNTLPEEFARLYPRLVRTTRAALA 304 RF DE L H+A ++ R + + + + + Sbjct: 214 SKLKFRFSDEA--FISLVIHVAISIERLKHKKDVKLSKAVLNNLKQK--DEYVIAQQMAK 269 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ 340 E+++ V L + E G + + MQ+N + + Sbjct: 270 EIEAKFNVVLPESEIGYIVLHIIGTKMQQNKIEDVN 305 >UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZR0_HALOH Length = 741 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 70/431 (16%), Positives = 161/431 (37%), Gaps = 19/431 (4%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R+ IL LFQ + + + D+ E L H L L Sbjct: 89 LSPKERQHLILFRLFQANEPIIIKELEIMLRISKSTIIKDLDEVEN-WLSKHNLILIRKT 147 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPS--FITSQFTPALKSELKRRGIARNF----- 123 + ++G ++ R + + L F+ AL+ G + F Sbjct: 148 NYGLEIKGDEIDIRHAMMNVLEETANEKELVGFLRQIQKKALEERNLEPGFFKEFDKLVS 207 Query: 124 -YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 D T ++++++ ++L +F L ++L + + G Q + + + Sbjct: 208 GIDLTKIESVISFAEKQLGFQFADEAYASLLVHLALAISRLLEGKDIQLPEERLKVIKKS 267 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH-------QRDRQLR 235 E+++A++IG+ ++ +P E ++ L ++ + D D++L Sbjct: 268 DEYKIAKKIGKIMEQIFDISIPDSEIGYVTLHLMGAKLWQKIGDDDYKKLINQDLDQELI 327 Query: 236 QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 K +V + V+ D+ L L HL +NR + + + N L + Y + Sbjct: 328 ILTKEMVKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIKYDLPLKNPLLLDVKSRYGEI 387 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQI 355 + + A +S+ +S +E G + + GA L + + +++L+ + + Sbjct: 388 FKAAKRAAKILQSKLQKSISSDEIGYITLHLGAALERSKSSRKLRVVLVCSSGVGTTNLL 447 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTG-APRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 +L + +SV + LII + + ++ + L+ Sbjct: 448 SSRLSKEFSEIKICNVVSVIQLENNEVDLKNIDLIITTIPLDID--DILVLQVNPLLSQK 505 Query: 415 QQEQIRKMLES 425 ++ ++ +++S Sbjct: 506 DKKNVKAIIQS 516 Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 36/323 (11%), Positives = 86/323 (26%), Gaps = 34/323 (10%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R CQ+L L ++ ++ V D+ + I + L Sbjct: 6 RVCQLLKYLIDQEKAVSIKQLADRFNVSSRTIRYDLDDIESSI-SSYDAKLIRKTRIGVY 64 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +EG + L + + L+ + Sbjct: 65 LEGKEEELNKIQEELANLYGLERILSPKERQHLILFRLFQANEPIIIKELEIMLRISKST 124 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + L ++L + + + + G+ + + + I Sbjct: 125 IIKDL-----DEVENWLSKHNLILIRKTNYGLEIKGDEID---------------IRHAM 164 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRD---AHQRDRQLRQS----IKRLVNHFREL 248 + E + + + + + D+ + I+ +++ + Sbjct: 165 MNVLEETANEKELVGFLRQIQKKALEERNLEPGFFKEFDKLVSGIDLTKIESVISFAEKQ 224 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGF 306 +F DE L HLA A++R L I + + + + + Sbjct: 225 LGFQFADEA--YASLLVHLALAISRLLEGKDIQLPEERLKVIKKS--DEYKIAKKIGKIM 280 Query: 307 ESEYGVHLSDEESGLVAVIFGAW 329 E + + + D E G V + Sbjct: 281 EQIFDISIPDSEIGYVTLHLMGA 303 >UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metabolism n=3 Tax=Bacillaceae RepID=B7GJR6_ANOFW Length = 691 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 62/424 (14%), Positives = 144/424 (33%), Gaps = 16/424 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 + + +R+ IL+ L + G + + + V S D+ + ++ + H L L Sbjct: 85 TEYTPEERQTMILIALLESGEPVKLISLANDLNVTVATISNDLDKVEEKVEK-HGLALVR 143 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY---- 124 + G+ +R + L F F + + KS + Sbjct: 144 KRGYGVEIAGSEAAKRKMMSELLFDHFDESQFFSFMKESIQKKSTDLVNTVTEKLLGLVD 203 Query: 125 --DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 ++ + L L ++L + + G F+ + Sbjct: 204 KKKLFMIERQIEAMKDDLPFTIADSSYIALVIHLALAIERIMQGEAIHFDAQHLQTISMT 263 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-DRQLRQSIKRL 241 E++ A++I + + +P +E ++ + ++ + ++ + L Sbjct: 264 KEYETAEKIAKRLEEVFHLVIPKEEIGYITMHLMGAKLRTHRGYMLEEASLEIAMKTQEL 323 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 + E V D+ L + L HL AL R +GI N L + Y L + Sbjct: 324 IRFVSEQIGVDLTDDYPLYEDLIVHLKPALYRIQHHMGITNPLLHKIMEDYSELFHVVQR 383 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRE 361 + S + + +EE G + + F + L+++ + +++ + + +L++ Sbjct: 384 GVRHVFS--DMTVPEEEVGYLVLHFASALLRDK--QGIRALVICSSGIGTAKILATRLKK 439 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 +I+ S Q LI++ + P + L + IR+ Sbjct: 440 EIPDISHIEQKSFFDV-QRVDVHEYDLIVSTVPIHTSH---PYFLVNPMLPEEEVTAIRQ 495 Query: 422 MLES 425 L++ Sbjct: 496 FLKT 499 Score = 94.5 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 91/325 (28%), Gaps = 22/325 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 +SA +R+ IL L T+ ++ V + D+ ++ + L L Sbjct: 3 ISARERK--ILDLLLAHPKGITVKDVAKQLDVSERTVHRDLKGVE-QVAEAYNLQLIKKA 59 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 ++ G + R + T L + L+ + +L Sbjct: 60 GVGIQIVGDEEKKHQLQMRVFR--LSHTEYTPEERQTMILIALLESGEPVKLISLANDLN 117 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 V S L K E + H L L++ G + + + E Sbjct: 118 VTVATISNDLDKVEEKVEKHGL------ALVR-KRGYGVEIAGSEAAKRKMMSE-----L 165 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + H+ + + L ++ + I+R + ++ Sbjct: 166 LFDHFDESQFFSFMKESIQKKSTDLVNTVTEKLLGLVDKKKLFM---IERQIEAMKDDLP 222 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 D L HLA A+ R + I + T E + Sbjct: 223 FTIADSS--YIALVIHLALAIERIMQGEAIHFDAQHLQTISMTKEYETAEKIAKRLEEVF 280 Query: 311 GVHLSDEESGLVAVIFGAWLMQEND 335 + + EE G + + ++ + Sbjct: 281 HLVIPKEEIGYITMHLMGAKLRTHR 305 >UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D9V5_GEOSW Length = 661 Score = 306 bits (785), Expect = 8e-82, Method: Composition-based stats. Identities = 69/421 (16%), Positives = 150/421 (35%), Gaps = 19/421 (4%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 R+ Q++ L TM +E V + D+ E L+ L L Sbjct: 89 QEYRKLQLIKILLTEDKPVTMQQLAEQFYVSKSVIQYDLEEIE-HWLQSFGLVLIRKPHL 147 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 +VEG+ R L + + S+ ++ LK Y+ T ++ Sbjct: 148 GIKVEGSEKAWRTALSRLIELFVDHSYYILDSKQLKLIEDVLKP-------YELTLIEKE 200 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 + L+ + + L +++ + + G + Q + + E+++A+++ Sbjct: 201 IRKMDEWLEFPLTDQSVISLTIHIAIAIKRIKKGHRIHIDTNQLQELQKKPEYKLAEQLA 260 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLR--------QSIKRLVNH 244 + ++ +P E ++ L R+ + QL Q +K L++ Sbjct: 261 KQIEQWVAVKIPKAEIGYITLHLLGARLRYDQVHEKEDIEQLLTKMDYEALQIVKELIHD 320 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + R ++ L L H LNR + + N L ++ ++Y + + Sbjct: 321 ISLCTDERLRKDKELLLGLTIHFHSTLNRLRNGLAVKNPLLKDIKQMYRYSFEMVLSLIP 380 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 E + V + ++E + + A L + +N + + I++ S IE +L Sbjct: 381 KIEKKANVAIPEDEIAYIVLHIQAALERMQNKNEKIRTIIVCATGSGTSRLIEAKLSTTF 440 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I S+ +T A L+I+ + P P+I L + + + + + Sbjct: 441 PKLEIIAVTSMAKLHETIATTQPDLLISTVPLEHP--KIPVITVSPLLPKKELDILEQWI 498 Query: 424 E 424 E Sbjct: 499 E 499 >UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QUF4_9BACI Length = 685 Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats. Identities = 77/420 (18%), Positives = 152/420 (36%), Gaps = 21/420 (5%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S+ +R+ I L +F + E V D+ + E QL L Sbjct: 87 YEYSSDERKAWIGLLIFIRSGRIFLHDLLEKLQVSRSTLLNDVKKLKSEWQ-LFQLELAF 145 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 Y V G +R + H+ + L + + Sbjct: 146 HRKQGYFVIGEEKQKRKAIVHYAAQILATVG-----------YERLCSELLGGHILP--- 191 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 ++ ++ R+ + IH L +YL L + G Q + ++ +S E++ A Sbjct: 192 VKNIIRQSETFSAIRYTNDVIHTLTVYLSIFLKRWIRGKYIQMDEQEKEVLQSTREYKTA 251 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKRLVNHFRE 247 I + VP DE ++ RV D + D + L+Q IK +V+ F++ Sbjct: 252 HHIITQIENVFQVDVPQDEICYLTTYLLGSRVTDDKQIDQNNEIATLKQIIKNMVDDFQK 311 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 V+F + L L H+ A R + + + N L + Y + T+ + E Sbjct: 312 YACVQFKHREELEKNLLIHMKPAYYRLKYGLHLQNELTQSVKANYHDIFTLTKKVVHHVE 371 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 + G + D+E +A+ FG WL +E + K+ +++ + +++Q+ EL Sbjct: 372 NVVGQSVGDDEIAYIAMHFGGWLDREGVSVPTRKKALIVCESGIGTSRILQKQIEELLPT 431 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 I +S + + + + ++ +PL P+ LT + + + Sbjct: 432 VDVIDIISAREY-KAYSLEHVDFVVTT--IPLEPRDIPVYIVRPILTAADKMLLLRETNG 488 >UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus halodurans RepID=Q9K679_BACHD Length = 700 Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats. Identities = 62/420 (14%), Positives = 148/420 (35%), Gaps = 13/420 (3%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + +R+ +L L Q + T ++ V S D++ L +L L Sbjct: 85 EFTPEERQMLLLAILLQHREPLKLFTLADELNVTVATISNDLTRAE-AWLNGFRLELVRK 143 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCP--SFITSQFTPALKSELKRRGIARNFYDD- 126 ++ G + R + L ++ +++ + + Sbjct: 144 RGYGVQIIGRESDIRRAISQLLAEHLTESKMYRMLSEPLDDWEQTDAISERLLHLINLEL 203 Query: 127 -TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 N+Q ++ +++ + R L ++L + + G + +P + EF Sbjct: 204 VRNIQEVLADFRKQMVEPMADRAYIGLIVHLTLAIERIRQGEKIEIDPSYLSKLKMDKEF 263 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-DRQLRQSIKRLVNH 244 ++A ++ R +++ +P E +M + + + + QL +K L++ Sbjct: 264 ELAADLARRLEQKLGMNIPEAEVGYMTMHIRGAKAHIETESLLEESNFQLGVRVKALIHE 323 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + +V+F + L L HL AL R + I N L E+ + Y L + Sbjct: 324 VEKSLHVQF-QDPSLFQGLVAHLKPALYRIREKMKIYNPLLEKIKQDYEELFHVVQVKGN 382 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 + + +EE+G + + FG+ L + +++++ + + ++ + Sbjct: 383 KVFE--PITIPEEEAGFLVMHFGSALERLKRKRTLKVLVVCSSGIGSSKFLASRIEKEFP 440 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 +I+ S + L ++ + L H+ +QIR L+ Sbjct: 441 EIASIEQASFFELGEKN-LHDYDLFLSTIPL---HADVKHFVVQPFLPPHEVKQIRAYLD 496 Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 92/319 (28%), Gaps = 33/319 (10%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL L Q T+ ++L V D+ +IL + L L Sbjct: 6 RERNILHQLLQHKDGLTIPKLAQLLDVSTRTIQRDLKGIE-DILAEYGLKLN-KSSAGLV 63 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 + G Q L + L + L L+ R + F L V Sbjct: 64 ISGGPSEQEKLLG--FLQTLELNEFTPEERQMLLLAILLQHREPLKLFTLADELNVTVAT 121 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 S L + ++ L L G Q + I R Sbjct: 122 ISNDLTR--AEAWLNGFRLELVR-----KRGYGVQIIGRESD-------------IRRAI 161 Query: 196 QRRALQPVPPDEPL-FMALLFSMLRVPDPLRD--AHQRDRQLRQSIKRLVNHFRELGNVR 252 + + + + ++ D + + H + +L ++I+ ++ FR+ Sbjct: 162 SQLLAEHLTESKMYRMLSEPLDDWEQTDAISERLLHLINLELVRNIQEVLADFRKQMVEP 221 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 D L HL A+ R I ID + + + E + Sbjct: 222 MADRA--YIGLIVHLTLAIERIRQGEKIEIDPSYLSKLKMD--KEFELAADLARRLEQKL 277 Query: 311 GVHLSDEESGLVAVIFGAW 329 G+++ + E G + + Sbjct: 278 GMNIPEAEVGYMTMHIRGA 296 >UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY31_9BACL Length = 650 Score = 304 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 64/430 (14%), Positives = 138/430 (32%), Gaps = 28/430 (6%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 ++ P + +R + L T+ ++ + + D+ R+ L Sbjct: 84 SIKPKEQETEEERLIAVAYRLLMETKPVTIQELADKHYTSKTVIKKDLDAL-RDWLAKWD 142 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 L + + +EG ++R L + +FI +F P Sbjct: 143 LIVVSKQKVGVLIEGKERDKRAALSKLSQLTGEAGQAFIKDRFAP--------------- 187 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 ++ + + Q F L ++ + + F+ ++ + Sbjct: 188 HELDIVTRELKQLELDAQLAFTDEAFDNLLIHTLLMIRRTKLKQPITFSEQEKVFVRGKP 247 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD--------PLRDAHQRDRQLR 235 EF+ R +R P DE ++ ++ P D ++R Sbjct: 248 EFRWTGAFIRKLERFFAVRFPEDEVAYLTAHILGGKIRSRARIETAEPGADPSAETAEVR 307 Query: 236 QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 + LV L + F ++ L + L HL LNR + + + N + ++ R+YP + Sbjct: 308 GLAETLVRKMSALTWMDFGQDEALMEGLRIHLYSTLNRLSYGLTVSNPMLQDIKRMYPYM 367 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEND--LHEKQIILLTGNDSEREA 353 A Y + +EE + + F A + + + K+I+ + Sbjct: 368 FDMVIYATRELSEGYPFTIPEEEVAYLTLHFQAAVERLSQPAEGRKRIVTVCHMGVGMSQ 427 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 + +L + + A II+ +PL + P I L T Sbjct: 428 ILRSKLERKFPELHVLDSVRKADLPGYLAHHSVDFIIST--IPLENVNVPYITVSPLLET 485 Query: 414 HQQEQIRKML 423 + ++I + Sbjct: 486 GETQKIADFI 495 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 34/323 (10%), Positives = 76/323 (23%), Gaps = 37/323 (11%) Query: 15 QRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 R+ IL L + + G + D+ E + + + L Sbjct: 3 DRQKDILHMLLTDARPHLVIRDIALHFGCSEKTIRNDLDEIDQYLTQSSNARLVRKPGYG 62 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 ++ + ++ LR T + + + + Sbjct: 63 VALDISEPDKAQITAELLRSRSIKPKEQETEEERLIAVAYRLLMETKPVTIQELADKHYT 122 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 + + +L + + + G+ + +R A S L + Sbjct: 123 SKTVIKKDL---DALRDWLAKWDLIVVSKQKVGVLIEGKERDKRAALSKLSQLTGEAGQA 179 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 + R + R + + F Sbjct: 180 FIKDRFAPHELD-------------------------------IVTRELKQLELDAQLAF 208 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 DE D L H + R+ I + E+ R T A + E + V Sbjct: 209 TDEA--FDNLLIHTLLMIRRTKLKQPITFSEQEKVFVRGKPEFRWTGAFIRKLERFFAVR 266 Query: 314 LSDEESGLVAVIFGAWLMQENDL 336 ++E + ++ Sbjct: 267 FPEDEVAYLTAHILGGKIRSRAR 289 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 56/419 (13%), Positives = 138/419 (32%), Gaps = 26/419 (6%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 R +L L + +E V + D+ R + H L+++ Sbjct: 95 PEDRVAYLLKRLLLSEDYIKLDALAEELFVSESTVKNDLKAV-RHLFSLHGLSVSHRPKY 153 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 R+ G + R C+ + + + + + +Q + Sbjct: 154 GLRLTGEEMKLRYCMAEHVFQKAHANSTLLPEETYQF-------------------IQGI 194 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 V ++ + L ++ + + + + FQVAQ++ Sbjct: 195 VRSRTKASGLYLSEIGLSNLVTHIAIACKRIEEKKIVMMPETELKEIQVQPVFQVAQQMA 254 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQ----SIKRLVNHFREL 248 + P E ++A+ ++ H L + I +L+ + E Sbjct: 255 EDIRHVLGIEFPLSEMAYIAIHLMGAKMMAYGDAGHTLFHLLEEDHFRFIHQLLAYVEEH 314 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 ++ ++ L L HL A++R + + I N + R YP + Sbjct: 315 MSLNIQFDKELIVGLSLHLRSAIHRFRYGMNIRNPYLTDIKRHYPIAFEAGVYMGRWLKE 374 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + G+ + ++E G +A+ GA + + H +K+ +++ + +L+ + Sbjct: 375 KEGIEIHEDEIGYLALHIGAAIERTKSQHVKKRCLIVCATGVASSQLLLHKLKAAFSERM 434 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA 426 I + + + R II+ + P++ L+ ++++ ++ A Sbjct: 435 EIVGTASVGEMSSYDLRSIDFIISTIPLQ-NTLPVPVVDVHTILSDDDIVRLKRFVQGA 492 >UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK9_BACCO Length = 620 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 67/412 (16%), Positives = 142/412 (34%), Gaps = 22/412 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 +R IL L + V D+ + + IL+ + LTL Sbjct: 83 EQEERVKYILKRLLLEKDYVRLEDLEADLYVSKSTLHTDLKKVRK-ILKKYDLTLANRPH 141 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 +VEG +RLCL + G++ P + F L ++ Sbjct: 142 YGTKVEGGEFKKRLCLADSIF-GWQNKPGQQNTPFNQDLFQ---------------KVKQ 185 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ + + RF ++ L ++ + G T + P + E +VA+EI Sbjct: 186 ILIRIISKYRIRFSDIELQNLATHITLACKRIEDGFTIEPLPFHFKE-SYTFERKVAKEI 244 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 ++ P PP E ++ + ++ D ++ + +++ + Sbjct: 245 TGEVEKSVGIPFPPAEIDYILVHLLGTKLISKHVARQVSD-EIDDIVNAILHELKTQFRW 303 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 F +++ + L HL +LNR + + I N L E +P AA E+ Sbjct: 304 DFSNDKEFRNGLTLHLHTSLNRMKYKMHIRNPLLNEMKTKFPIAFEGAVAAGECIEAVIH 363 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 ++++E +A+ L + +K+++++ + QL + I Sbjct: 364 KKVNEDEISYLAIHIAIALERMR--KKKRVLVVCATGLGSAKILSYQLENRFANEMEIVD 421 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 L LI++ +P P++ L + I++ + Sbjct: 422 TISYYTLSDYDLSRVDLIVSTIMIP-DHLEVPVVVVSHFLEENDAIHIQREI 472 >UniRef50_P46321 Putative phosphotransferase enzyme IIA component n=2 Tax=Bacillus RepID=LICR_BACSU Length = 641 Score = 300 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 51/418 (12%), Positives = 145/418 (34%), Gaps = 24/418 (5%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 +R ++ L + +E + D+ E + +L +++ + T + Sbjct: 90 PEERMAYLMKRLLLADHYLKLDELAEELFISKSTLQTDLKEVKKRLL-PYRIVMETRPNY 148 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 +++ G + R C+ ++ ++E+ + ++ + Sbjct: 149 GFKLRGDEVQMRYCMAEYI---------------VDERETEIDVLNEKADILPKEEIEII 193 Query: 133 VNLCSRRLQ---KRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++++ + ++ L +++ + P E+Q A+ Sbjct: 194 RSAILKKMKNDRIPLSNMGLNNLIIHIAIACKRIRTENYVSLFPKDMDHILHQKEYQAAE 253 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPL---RDAHQRDRQLRQSIKRLVNHFR 246 I + + + P DE ++ + + D + + Q ++ Sbjct: 254 AIVKELESKLSVTFPKDETAYITMHLLGTKRMTQSQCGEDTFSIEEETDQLTLAMIKAVD 313 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + ++ L L H+ A++R+ + + + N + YP A Sbjct: 314 RELKLGILHDKELKIGLALHMKPAISRNRYGMNLRNPMLAAIKEHYPLAFEAGIIAGIVI 373 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 + + G+ + + E G +A+ FGA + ++ + K+ I++ + + + ++LR Sbjct: 374 KEQTGIEIHENEIGYLALHFGAAIERKKTESPPKRCIIVCASGAGSAQLLREKLRSHFGK 433 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 L+I + L + +I+ + L P++ + L +I +L Sbjct: 434 RLDILGTAEYYSLDQMSYESIDFVISTIPIKKELP-VPVLKVNTILGGTDFTKIESIL 490 >UniRef50_P54901 Stationary phase-inducible protein csiE n=121 Tax=Enterobacteriaceae RepID=CSIE_ECOLI Length = 426 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 426/426 (100%), Positives = 426/426 (100%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR Sbjct: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA Sbjct: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE Sbjct: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR Sbjct: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR Sbjct: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR Sbjct: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR Sbjct: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 Query: 421 KMLESA 426 KMLESA Sbjct: 421 KMLESA 426 >UniRef50_Q63A16 Possible transcriptional antiterminator, bglG family n=15 Tax=Bacillus cereus group RepID=Q63A16_BACCZ Length = 701 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 69/421 (16%), Positives = 150/421 (35%), Gaps = 8/421 (1%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 S +R+ ++L L + L V + D+ + E L + L+L Sbjct: 85 QYEYSPKERKIWLILYLLIQEKRILLKDLINLLQVSRNTVLADLKKLKVE-LNKYNLSLH 143 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + Y++ G ++R L L + + S++ Sbjct: 144 SFRKEGYQIVGNEQSKRNLLILSLSQIISQNGWEYLISQVNYIMSDMGSETDTLARETLY 203 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++ ++ C L ++ + L +Y+ + G + ++ + +F+ Sbjct: 204 IIKKILANCEEFLGVQYTDEVLENLSVYMYLFHRRILKGKCVEMEEAEKNVLKDSKQFEA 263 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR-QLRQSIKRLVNHFR 246 A+ I + ++R + P DE ++ +V + + ++ + ++ F+ Sbjct: 264 AKYIAKQFERAFVVKFPIDEIYYITTHLLGAKVNYQENVYEKNNMDEIHSIVDCMIKDFQ 323 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 V F D GL LY H+ A R + I I+N L Y + T+ + F Sbjct: 324 HYACVLFQDFNGLFTDLYLHMKPAFYRVKYGIEIENPLRNTIQENYEEVYFLTKKVIHHF 383 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRELTL 364 E +SD+E V + FGAW+ +E K +L+ N ++ QL +L Sbjct: 384 EEYVRKSVSDDEIAYVTMHFGAWMRKEGIVPNPRKTALLVCPNGIGTSRMLQYQLEKLFS 443 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + +S + + II + + P+ + L+ ++ + + + Sbjct: 444 NIDILNAISKREYESNTF--DVDCIITTT--EIEKGNVPVFKVNPILSDSEKAALLRKVN 499 Query: 425 S 425 Sbjct: 500 G 500 >UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ5_9ACTN Length = 616 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 68/431 (15%), Positives = 142/431 (32%), Gaps = 12/431 (2%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 P+L + +R +L L ++ SLD+ + R IL + Sbjct: 36 PSLVHGVPATRAERVVYLLNDLLMRNDWVFADDLADACACSRSTLSLDLRDVER-ILNRY 94 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLF-HWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 L L RV G LN+RLCL + L + P+ E + + Sbjct: 95 DLVLERRPRYGMRVSGLELNRRLCLAASAMGDATCLLGGIGDAAPAPSSAPESLFQRMGM 154 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + A V + L +++ L++ +AG E Sbjct: 155 QRESLEVIAASVEDALTDGPININAISYQNLLVHIAIALVRINAGCYVPLASEDMSDIER 214 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ------RDRQLR 235 E+ A+ + + R +P +E ++A+ + R + + ++ Sbjct: 215 RSEYAAARRVAGGIKSRLGMELPEEEVAYIAIHLAGKRTLNDALSNEEPEGGLVISDEIW 274 Query: 236 QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 + +++ R + F ++ L L HL R + + N L + YP Sbjct: 275 ALVSDMLDSVRTHFHFDFDEDIELRMNLARHLVPLAVRLRSQMNLKNPLLGDITTHYPLA 334 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQ 354 A E+G S++E G +A+ F L ++ K+++++ + + Sbjct: 335 WSMAVDACEVLHREFGTAPSNDEIGYIAMAFALALERQRSQAPRKRLLVVCASGAGSARL 394 Query: 355 IEQQLRELT-LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 ++ + ++ +I+ V R + + L P+ Sbjct: 395 LKCRCQKEFGSYVESIETCDVMHVADVDFSR-IDYVFTTVPISAKLP-VPVREVPFFFDD 452 Query: 414 HQQEQIRKMLE 424 ++IR +L Sbjct: 453 AAADEIRDLLR 463 >UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E24 Length = 691 Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats. Identities = 76/427 (17%), Positives = 156/427 (36%), Gaps = 15/427 (3%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 P + P+R+ +L L + + T S V S D+++ + + ++L L Sbjct: 71 PVQEYTVPERKVYLLSMLLESSEPIKLFTLSNELKVTAATVSNDLNQLA-DWFKQYKLRL 129 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + G+ +R + + F F+ Q PAL+ R N D Sbjct: 130 IRRRGYGILLTGSEEAKRKAILSLIIGHFTDAELFMLIQGYPALRDRQARISPVSNKLLD 189 Query: 127 -------TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 + + + + L F + +YL L + G + + A Sbjct: 190 LIARDKLEMIDSALGEIDKELMAPFADTSYLYFMVYLALMLKRLELGQELSLDATSKEAA 249 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRD-AHQRDRQLRQSI 238 + E+ VA++I RH +P DE ++ P + + +L + Sbjct: 250 KRAPEYNVAEKIFRHIAETFGVELPEDEACGFTPYIKSGKLRKPSEEWIDAENIELSTLV 309 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 LV++ + + ++ L L +HL ++ R I + N ++ Y + + Sbjct: 310 YELVSYCEQKLHADLLSDRNLMQGLVSHLEPSIYRIRENIIVQNPYLDQIRSDYAHVYQI 369 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQ 357 A+ V + D+E G + + A L ++ LH+ + ++ + + Sbjct: 370 VEEAVHQV--MPQVKVPDDEIGFLVMHIAASLDNKHLLHKTFKGLVFCASGIGTSKMLAT 427 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 ++R +K++S+ Q P LII+ +P+ + LT + E Sbjct: 428 RIRNKIPELQVLKNVSIFELDQID-PGAFDLIISTVKLPIDASQ--YVLVSPLLTDGEVE 484 Query: 418 QIRKMLE 424 IR++LE Sbjct: 485 MIRRLLE 491 >UniRef50_P96574 Putative phosphotransferase enzyme IIA component n=6 Tax=Bacillus RepID=MTLR_BACSU Length = 694 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 65/420 (15%), Positives = 143/420 (34%), Gaps = 10/420 (2%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 SA +R+ IL +L + + T + V + S D+ E + I LTL Sbjct: 82 EQHEYSADERKLLILCSLLESQEPVKLYTLAHDLQVTNATVSYDLDELEKWI-SPFGLTL 140 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 ++ G +R + + + F+ + + Sbjct: 141 IRKRGFGIQLIGPENAKRKIVGNLIVNRLD-IQMFLEAVELNIKGKTDSSEKMFGVVSKG 199 Query: 127 TNLQ--ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 L+ ++ ++ L ++L Y + + G T + + E Sbjct: 200 ELLKMERILFQLKEKIAFSLSDSSYIALVVHLTYAIERIKLGETITMEQNELEELMNAKE 259 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLF-SMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 + A EI +R +P E ++ + S R A + + + KRL+ Sbjct: 260 YSSALEIAGELERAFGVTIPEAEVGYITIHLRSANRKYKTEYKAQEIELETALQTKRLIA 319 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 + + L + L HL A++R I I N + E+ R Y L + Sbjct: 320 FISDKIRMDLTKNYSLYEGLIAHLEPAVSRIKENIEIYNPMKEQIKRDYFLLYMAIEEGV 379 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 + G+ SD+E + + FG+ L + + + + +++ + + +L++ Sbjct: 380 EKY--FPGMSFSDDEIAFIVLHFGSALEIKKEEAKVKALVVCSSGIGSSKMLASRLKKEL 437 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + S+ L+ + +I++ +P + I L Q+++ + Sbjct: 438 PEIESFDMSSLIE-LKGKDVQAYDMIVSTVPIPYE--NIDYIMVSPLLNEEDANQVKQYI 494 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 77/311 (24%), Gaps = 26/311 (8%) Query: 28 GLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCL 87 T+ +EL V ++ ++ LTL + G+ ++ L Sbjct: 18 NRYITVTELAELMQVSTRTIHRELKSIKP-LMETVGLTLDKQPGKGLKAVGSPEGKQKLL 76 Query: 88 FHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESR 147 +L + + +D A V+ L+K Sbjct: 77 TDLSYEQHEYSADERKLLILCSLLESQEPVKLYTLAHDLQVTNATVSYDLDELEKWISPF 136 Query: 148 DIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDE 207 + + G Q + + V I + Sbjct: 137 GLTLI----------RKRGFGIQLIGPENAKRK-----IVGNLIVNRLDIQMFLEAVE-- 179 Query: 208 PLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHL 267 L +L + ++R++ +E D L HL Sbjct: 180 -----LNIKGKTDSSEKMFGVVSKGELLK-MERILFQLKEKIAFSLSDSS--YIALVVHL 231 Query: 268 AQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFG 327 A+ R I E + + + E +GV + + E G + + Sbjct: 232 TYAIERIKLGETITMEQNELEELMNAKEYSSALEIAGELERAFGVTIPEAEVGYITIHLR 291 Query: 328 AWLMQENDLHE 338 + + ++ Sbjct: 292 SANRKYKTEYK 302 >UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0J7_9FIRM Length = 708 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 75/420 (17%), Positives = 138/420 (32%), Gaps = 8/420 (1%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S L+ QRR ++ L + T + L V D S D+ L Q+TL Sbjct: 105 STLTPDQRRSILIARLLMADGPLKLFTLAHLLHVTDSTVSHDLDRLQP-WLAARQITLVR 163 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSF-ITSQFTPALKSELKRRGIARNFYDDT 127 VEG + R L + + D Sbjct: 164 RPGLGVYVEGAERDIRRALVRIIHDYVDEKELLALIGDDAAEEGPAYAADRALLGLVDPA 223 Query: 128 NLQALVNLCSRRLQ-KRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 ++ + + + Q + L ++L + + G T + EF Sbjct: 224 QIRRIDDAVAAETQDRNIPDSARVGLVVHLALAVRRLQQGDTIAMDAGTLEELRQTEEFS 283 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLR-VPDPLRDAHQRDRQLRQSIKRLVNHF 245 VA+ I +P E ++ + R + P + +L Q + ++ Sbjct: 284 VAETIAARMGEVFSISIPAAEIGYITMHLLGARGMTLPSGGGRVDNFRLVQIAQSIMRRA 343 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 E + L L HLA AL+R + I N L + +P L+ R A+ Sbjct: 344 SEKSGAPLMRSRTLLTGLVNHLAPALHRLKLHMDIRNPLLAQMEEEHPELMEIARHAIPM 403 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREAQIEQQLRELTL 364 E E G+ + ++E +A+ GA L + H ++++ + +LR Sbjct: 404 MEEEAGMPVPNDEVAYIAIHIGAALTEAGGDHPAARVLVACPTGLGTSRLLASRLRRSYE 463 Query: 365 LPLNIKHMSVKAFL-QTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S A Q R A +++ + ++ + LT + QI +L Sbjct: 464 RIRVVGVVSSLALTAQEILRRSADFVVSTVPLSPLPVPVVVVS--VFLTAADRAQIDAVL 521 Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 1/64 (1%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL L T + GV + ++ L + + L + Sbjct: 25 RMRTILSLLLAASGYVTAEHIAAELGVSARTVTREMHGIETA-LEPYGVMLLRRTGAGFM 83 Query: 76 VEGT 79 + G Sbjct: 84 LSGD 87 >UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDU8_BACSK Length = 688 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 60/416 (14%), Positives = 130/416 (31%), Gaps = 8/416 (1%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++ +R +L L + ++ V D+++ E L + L Sbjct: 84 DFTSDERVGLLLALLLDANEPVKLFALAKELNVTPATVGSDLTK-AAEWLEQFGIKLIRK 142 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 V+GT N R + L + R + + Sbjct: 143 RGYGIAVKGTETNIRQAMSAILSENLTEEAFYEAVYAGQMQNEVASRLLHFVDLETIRLV 202 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 Q+ + + + L ++ + + G + + Q VAQ Sbjct: 203 QSTIQRVKEKHFDDMADQSFIALVVHATLAIERIKQGEQIRMDAGQLEALHKEDSLPVAQ 262 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQRDRQLRQSIKRLVNHFREL 248 E+ + +P E ++ + R+ Q + +L +K+ + + Sbjct: 263 ELAEALAQTFQITIPEAEIGYLVMHLRGARIGHIQGEPFEQSNAELAGRLKQFIAGMEQD 322 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 +V + L L HL AL R + I N L E+ Y L T + ++ Sbjct: 323 LSVSLAEPS-LFQGLLAHLKPALYRVRQGMKIHNPLLEKVKADYAALFAVTAKQAS--KA 379 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 + L + E G + + FGA L + +++ + + ++R+ + Sbjct: 380 FAPLKLPEAEIGFLTLHFGAALERRKRSVSLSALVVCSSGIGSAKMLASRIRQEFPEISS 439 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 I + S+ + P L I+ + + LT + I+ ++ Sbjct: 440 ITNASLFDLDKYD-PANFDLFISTVKVETNNRQA--LRVSPMLTADEASLIKANID 492 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 85/325 (26%), Gaps = 42/325 (12%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 ++A +R +L L T+ +++ V D+ + + HQL+L Sbjct: 3 MTARERV--LLQALLANEQGLTLQELADVASVSVRTIQRDLPSLAK-VAANHQLSLH--R 57 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 +EG + L L L + + L L + F L Sbjct: 58 GHFLVLEGASTYK-LALKEKL-QTINAGDFTSDERVGLLLALLLDANEPVKLFALAKELN 115 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 L K ++ + +A + Sbjct: 116 VTPATVGSDLTKAA-------------------------EWLEQFGIKLIRKRGYGIAVK 150 Query: 191 IGR-HWQRRALQPVPP---DEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 + ++ + +E + A+ ++ R H D + + ++ + + Sbjct: 151 GTETNIRQAMSAILSENLTEEAFYEAVYAGQMQNEVASRLLHFVDLETIRLVQSTIQRVK 210 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNT--LPEEFARLYPRLVRTTRAALA 304 E D+ L H A+ R I E + + Sbjct: 211 EKHFDDMADQS--FIALVVHATLAIERIKQGEQIRMDAGQLEALHKEDSLP--VAQELAE 266 Query: 305 GFESEYGVHLSDEESGLVAVIFGAW 329 + + + + E G + + Sbjct: 267 ALAQTFQITIPEAEIGYLVMHLRGA 291 >UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) porter component IIA/transcriptional antiterminator n=2 Tax=Bacillus pumilus RepID=A8F9J6_BACP2 Length = 639 Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 69/414 (16%), Positives = 145/414 (35%), Gaps = 22/414 (5%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 +R I+ L + +E + S D+ + GRE+L + + L + Sbjct: 94 PEERVRFIMRKLLLQQDYLKIDQLAEELFISRMTVSSDLKK-GRELLARYGMALVSKPGF 152 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 ++EG L +R C L PAL +R + ++++ Sbjct: 153 GLKIEGDELQKRTCYADLLLEE------------EPALSHITEREQLHFPDISLETIRSI 200 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 V + + + L ++L + Q + + + S + ++AQ+I Sbjct: 201 VLTNLHQESLLIKDIALKNLVIHLAIAIQQTRKNQRIPASTTRTQ--RSPVLVRIAQKII 258 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + DE ++ + + HQ +++Q++ + H ++ R Sbjct: 259 HQVSDTFHVTLSEDETDYLVMHLLANQTWKEAAQ-HQTTVEVQQAVAVFLQHIEKMSGHR 317 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 F D+ L L H+ LNR + + + N L E YP + L + Sbjct: 318 FADDNILQQDLMLHMKPLLNRIQYGVSLQNPLLHEIKTSYPYPFDLAVSGLNALQ--LVR 375 Query: 313 HLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 +++E+ VA+ A + +K+ I++ G+ +E +L+ L+I Sbjct: 376 TPNEDEAAYVALHIAASFERSQLDTSQKKKAIIVCGSGLGTARLLEIKLKTAFQHELDIV 435 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + +II PL P+I H +Q+ +++ Sbjct: 436 ELYSYQDYLMSTTLPCDVIITTV--PLASKGKPVIQVSAFFEQHDVQQVNEVIH 487 >UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_LISW6 Length = 638 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 70/415 (16%), Positives = 141/415 (33%), Gaps = 25/415 (6%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + A R I+ L + +E V +LDI E R+ L+ + L + Sbjct: 95 PMFAEDRTDYIIRYLLLNNDYVKLEKLAEELFVSKSTINLDILEVKRK-LKENGLKVEKR 153 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 R+ G + R C +L + + + SE+ + + Sbjct: 154 ASYGIRITGVEVAIRFCFSRYL---LVESANPLITDTERNFFSEV----------NLEMI 200 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + +V + + L +++ + + L+ S EF+ AQ Sbjct: 201 EQVVISNIAKYNIHMTDISVKNLIIHIAIAVCRVKDNCYVHVTDLEDIEF-SIPEFRAAQ 259 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 +I + P E ++ L S + + + +++ +EL Sbjct: 260 DIIKEIDLSEGIHFPESEISYLLLHLSSKNRKSDFNNYRE-----YIIVDKMLTKIKELY 314 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 F +Q + + HL A+NR F + I N + YP A E E Sbjct: 315 GYDFKQDQKMISNIALHLKPAINRMKFNMNIQNPYLKNLKSNYPLAFELGLVAKDVLEQE 374 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL-PLN 368 +++ E G +A+ F L +E +++++++ + +E ++R+ Sbjct: 375 LKTKVNEAEVGYLAIHFLYGLDKEVVSDKQKVLIVCASGLGTSQLLESKVRKEFENALDI 434 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I S K + Q+G T+PL + P + LT I ++ Sbjct: 435 IGVYSFKEYEQSGTM----CDFVISTVPLRMKLHPFVQVSPFLTKADIRNITALI 485 >UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2H7N3_ENTFC Length = 661 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 64/413 (15%), Positives = 156/413 (37%), Gaps = 17/413 (4%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 + R+ IL L M +E + + D+ +E L + L + + + Sbjct: 95 YESEDRQKYILNQLLLEDAILFMDDLAEELYISRSSLTKDMQAI-KERLIPYSLKIVSKH 153 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 +EG N+R + +F + +LK L + + + + Sbjct: 154 GQGIWIEGEERNRRHFIMD----------TFFGNHCGNSLKEYLGQSRFFTDISFEELVI 203 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 +++ R + + I L L+L + + G + +++ +E+QVAQ Sbjct: 204 IILDET-REAKLKVSDFIIQNLSLHLALGIKRLREGFEIKELGIEQEV-SDRVEYQVAQR 261 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I + + A P +E ++ L ++ D++L + + +++ + Sbjct: 262 IVQRIEVIADVSFPQEEIAYLTLHLMAKSNHR----ENKNDQELSKEVVKVLKRLSQEFR 317 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 ++ L + L HL+ + R I I+N L EE + P++ + + + Sbjct: 318 FSLIEDHQLFNGLLDHLSPMMIRLSRGIRIENPLTEEIKKENPKVFEAVKTHFSNMPALK 377 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 ++++E +A+ A L +E H+ +++ ++ ++ + + Sbjct: 378 NYTINEDEWAYLALHLMAALEKERAAHKLHALIICATGYGSAQLLKNRVISEFGKNITVV 437 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ + +G LII+ + F P+++ + L +IRK++ Sbjct: 438 NVKGYYEINETTLKGIDLIISSIDLSTMFFKIPVLHVSIFLNEDDVHKIRKVI 490 >UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVY0_ALKMQ Length = 705 Score = 287 bits (734), Expect = 8e-76, Method: Composition-based stats. Identities = 56/428 (13%), Positives = 139/428 (32%), Gaps = 18/428 (4%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 + +R+ I L Q +++ V + S D+ + E + + L L Sbjct: 91 FTPQERQTIIASELLQANEPIKFYYLTKILNVSEGTISHDLDKLE-EWVDIYNLQLIRKP 149 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRG------FRLCPSFITSQFTPALKSELKRRGIARNFY 124 + G ++R + + + IT + E+K R N Sbjct: 150 GLGVYIAGREKHKRRAIINLIYENVEEKQLLSFIQENITKSPEISGSIEIKTRNRLLNLI 209 Query: 125 DDTNLQAL---VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 D ++ L + + + + L ++L + + + Sbjct: 210 DKETIRTLEGLIYIAEEEMGYKLADSAYVGLIVHLALAIKRIKNNEIIIMDKEFLNELNQ 269 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR---QLRQSI 238 EF +A+++ + + DE ++ + + + +L + Sbjct: 270 NPEFIIARKLALNLSDFFNIDIHEDEIGYITMHLMGSKNRGNVTKNETSTIGSFELVKLA 329 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 + ++ + + L L HL A+ R + I N L +E YP L++ Sbjct: 330 REMIKIAEAETGSFIGNNEKLLTGLVNHLEPAIKRIKMKMDIRNPLLQEIKTRYPHLIKV 389 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIE 356 + E G + + E +A+ GA + ++ + + ++ + + + Sbjct: 390 SSKCAKVLEDYLGQKMPESEIAYIAMHLGAVIEKKEIMPQIRFRVAVACPSGIGTSKLLA 449 Query: 357 QQLRELTLLPLNIKHMSVKAFLQT-GAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 ++ + + +S ++ II+ +P+ S P+I + L Sbjct: 450 TRIEKEYDNMHVVGIISSFRLEESWLKQEEIDFIIST--IPIEKSSIPVIKVNPLLLDED 507 Query: 416 QEQIRKML 423 + I + + Sbjct: 508 KYHIHQSM 515 >UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9P7_9ACTN Length = 648 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 63/422 (14%), Positives = 130/422 (30%), Gaps = 22/422 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 +A R +L L + T + + V S D+ + E L L + Sbjct: 85 PQTAEARVSYLLNDLLSRSDYIAIDTLASVLYVSRTSISNDLKQVE-ERLAQFGLAIDRR 143 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 +V G+ + +RLCL G L T Sbjct: 144 SHHGIKVIGSEMAKRLCLASLAMEGSDELKGAARLSVDAEAYRALFDVVSDCVDDVTTEE 203 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + +N L ++ LL+ G Q F +A+ Sbjct: 204 RFAINSV-----------AYRNLITHIVIALLRIREGCYVPMEGEQLTEIRKSPSFPIAR 252 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR------QLRQSIKRLVN 243 I R +P +E ++A+ + R+ ++ ++ ++ +++ Sbjct: 253 RISDSIGARTGVVLPDEEVAYIAIHLTGKRLLGDFDAGDDQEAGLVISDEVWDAVTGMLD 312 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 + L L HL R + +DN + + +P A Sbjct: 313 AVWRTFRFDLRHDLELRMNLARHLVPLEVRLHHHLHLDNPILGDIKSRFPLAYSMAVEAG 372 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQLREL 362 + + Y LS+EE G +A+ F L ++ D +K+I+++ + + +E + R+ Sbjct: 373 SSLAAHYEAELSEEEIGYIALSFALALERQKTDAPKKRILVVCASGAGSARLLEHRYRQE 432 Query: 363 T-LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 +I+ R + + P+ L + +R+ Sbjct: 433 FGSYVEHIETCDAAHVRFVDFSR-IDYVFTTVPL-AEEVPVPVRQVGYFLDAAEVSDVRE 490 Query: 422 ML 423 +L Sbjct: 491 IL 492 >UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR family n=3 Tax=Thermoanaerobacter RepID=C6PFK2_9THEO Length = 651 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 65/423 (15%), Positives = 147/423 (34%), Gaps = 23/423 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + R I L + T+ FS V + DI + E L + + L Sbjct: 86 PIFPDDRVYYIAKRLLETNNLMTLEDFSVELYVSKSTVAKDILKVE-EFLGKYGIKLYKK 144 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 +V G + RL L+ I LK D + Sbjct: 145 PKHGIKVIGDEKSIRLANAEILKNVTTKHDEIINDSLKDLLKD-----------VDLNAI 193 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 Q ++ + L ++L + + G + + E+++A+ Sbjct: 194 QRIIQGSEEKFNYILSDVSFKGLLIHLAISIKRLWEGKKVTLDLKDLNLLKKEKEWEIAK 253 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR-------QLRQSIKRLV 242 ++ ++ ++R V E ++ + ++ + + + +L +K +V Sbjct: 254 DLAKNIEKRFNVVVDDTEIGYITMHLMGAKLQNDIETEKFSENYLKRLDCKLYIILKSIV 313 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 N E+ +FY+++ L L+ HL +NR + +DN EE + + + Sbjct: 314 NDIAEMTGYKFYNDKKLLVGLFLHLKPTINRLKNGVKLDNPFLEEIKKECGIAFEISISF 373 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLR 360 + Y ++++++E G VA+ FGA + + D ++K +++ + +L Sbjct: 374 WEKLKEFYKINVNEDEIGYVAIHFGASIERLKSVDRNKKTAVIVCATGIGTAQLLTARLT 433 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 +L IK + V ++++ +I L ++I Sbjct: 434 KLFPNIELIKVLPVIKAKSMLKDLSPDIVLSTVPFETEEA--VVINVSPFLDEEDVDKIE 491 Query: 421 KML 423 +++ Sbjct: 492 RIV 494 >UniRef50_O31644 Putative phosphotransferase enzyme IIA component n=19 Tax=Bacillaceae RepID=MANR_BACSU Length = 648 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 64/418 (15%), Positives = 141/418 (33%), Gaps = 22/418 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R I L + + + V+ D+ E L+ LTL + Sbjct: 93 SDKERMLHIAYDLLMNPKPVSAKDIAARHFVNRSSIKKDLYAVE-EWLKRFDLTLVSRQR 151 Query: 72 GSYRVEGTVLNQRLCLFHW--LRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 +VEG N+R L L FI S+F Y+ + Sbjct: 152 LGLKVEGNERNKRKALARISDLIHNTAFTSQFIKSKFLH---------------YEVDFV 196 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++ F L L+ + + +P + + E+Q Sbjct: 197 TKEIKSLQKKHSLYFTDETFESLLLHTLLMVRRIKMKQPISLSPKEMAAVKKKKEYQWTF 256 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKRLVNHFREL 248 + + P +E +++ L +V PL+ + + + L + + L+N EL Sbjct: 257 ACLQRLEPVFAIRFPEEEAVYLTLHILGGKVRYPLQTEENLENAVLPKVVGHLINRVSEL 316 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 + F+ +Q L + L HL L R + + + N + + ++YP L L Sbjct: 317 KMMDFHKDQDLINGLNIHLNTVLQRLSYDLSVANPMLNDIKKMYPYLFHLIIDVLEDINQ 376 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 + +H+ +EE+ + + F A + + K+ +++ + ++ Sbjct: 377 TFDLHIPEEEAAYLTLHFQAAIERMQGSSETHKKAVIVCHMGIGMSQLLRTKIERKYHQI 436 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + ++ + + T+ L + P I L +++++ + Sbjct: 437 AVMACIAKADLKDYIKKHE-DIDLVISTIALENITVPHIVVSPLLEPGEEKKLSAFIR 493 >UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EN85_OCEIH Length = 696 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 63/426 (14%), Positives = 143/426 (33%), Gaps = 12/426 (2%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 S L+ +R+ +L TL Q + + V + S D+++ ++ + L+L Sbjct: 83 SSSELTEEERQVILLYTLLQFREPVKLFHLATELNVTIAMVSQDLNKLESQV-KSFGLSL 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCP--SFITSQFTPALKSELKRRGIARNFY 124 ++EG +R L H + R + + + Sbjct: 142 IRKKGYGVQIEGDEGRKRSVLSHLISRHIDPFQYVEKLKERIQEDVSKSDTISERLLGLV 201 Query: 125 DDTNLQALVNLCSR---RLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 D L + R +L L +++ + + G F+ + + Sbjct: 202 DAEKLDKIEEQIQRMRNQLPYDLADSAYIGLVVHIALAMERLQKGDIIHFDDEYKEQIKD 261 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDP-LRDAHQRDRQLRQSIKR 240 E+++A E+ H + +P DE ++ + ++ + + + K Sbjct: 262 EQEYKIAAEVIGHLEEAFSLFIPEDEIGYITMHLMGAKLRENQNYLLEESSMDIAYKAKE 321 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+ N+ + L THL A+ R + I+N + +E + Y L Sbjct: 322 LIRSVSNEMNIDVTHNNRFLNDLTTHLKPAVYRLKQQMNINNPMIDEIKKDYIELFEVVD 381 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 A+ + DEE G + + F A +Q + +++++ + + +L+ Sbjct: 382 KAIQHV--FPNLAFPDEEIGYIVLHFAATFLQTDSQSNLKVLVICSSGIGTSKMLASKLK 439 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 H S+ + G +I++ + + LT + +I+ Sbjct: 440 NTFPEISIANHQSLFDLDK-ETLAGYDVIVSTVALE--DIDRSYVLISPLLTDEEARKIK 496 Query: 421 KMLESA 426 L + Sbjct: 497 VELRKS 502 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 107/338 (31%), Gaps = 45/338 (13%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS+ +R IL L + ++ ++ V +I + + +L +QL L Sbjct: 3 LSSRER--HILKILLEAEKHMSVKEIADQLDVSVRTIHREIKKIEK-VLGDYQLNLVKKT 59 Query: 71 DGSYRVEGTVLNQ---RLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 ++G+ N+ R + + L + L+ R + F+ T Sbjct: 60 GTGISIQGSTENKKVFRQAM-----EELSSSELTEEERQVILLYTLLQFREPVKLFHLAT 114 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRR------WAES 181 L + + S+ L K L L + + G+ + + ++R + Sbjct: 115 ELNVTIAMVSQDLNKLESQVKSFGLSL-----IRKKGYGVQIEGDEGRKRSVLSHLISRH 169 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 FQ +++ Q + E L D + I+ Sbjct: 170 IDPFQYVEKLKERIQEDVSKSDTISERL-----------------LGLVDAEKLDKIEEQ 212 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTT 299 + R D L H+A A+ R I D+ E+ + + Sbjct: 213 IQRMRNQLPYDLADSA--YIGLVVHIALAMERLQKGDIIHFDDEYKEQIKDE--QEYKIA 268 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH 337 + E + + + ++E G + + ++EN + Sbjct: 269 AEVIGHLEEAFSLFIPEDEIGYITMHLMGAKLRENQNY 306 >UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFG3_9BACI Length = 645 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 60/427 (14%), Positives = 139/427 (32%), Gaps = 19/427 (4%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 ++ +L + +R ++ L G T+ ++E V + D+ E + L Sbjct: 80 ILQSLFSDDSKTMEERLFEMAFQLLTSGNAITLKYWAERYFVPNASLKKDL-EVIAQWLE 138 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 L L + + +EGT LN+R L H G + + Sbjct: 139 RFDLLLVSRQRLGHLIEGTELNKRNALAHL--SGLIPSGGIGKNPVLDLFQP-------- 188 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 Y+ ++ + RF + L ++ + + P + Sbjct: 189 ---YEIDIVRKALKEIQNNESIRFTDEALDSLVVHALIMIKRTRQRAPVFVEPAEMEKIA 245 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 E++ A P E ++ F + + A +D + ++ Sbjct: 246 LRKEYEYASAFFTRLADSFQLSFPEAEIVYYTWHFISAKRSEEAESALIQDEKAEHVVQL 305 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+ +L F ++ L L H+ ++R + I N L R+YP + Sbjct: 306 LIERMEKLTLFPFGNDHILASGLAVHMHSVISRIHYGFPITNPLLANIKRMYPYMFSMVI 365 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQ---ENDLHEKQIILLTGNDSEREAQIEQ 357 AL + + + ++E+ + + F A + + + ++ +K+ I++ +E Sbjct: 366 LALDDIREGFHISIPEDEAAYIVLHFQASIERLEGKRNIEKKRAIIVCHMGIGMSHLLEA 425 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 ++ + + + II+ PL I +E Sbjct: 426 KIEQQYAAIEIAACIGKAEVAEALEKHHPDFIISTV--PLEKAGTGYIQISPLFGQEDKE 483 Query: 418 QIRKMLE 424 ++ + ++ Sbjct: 484 RLSQFVD 490 >UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS system IIA component n=8 Tax=Streptococcus RepID=B4U3Q3_STREM Length = 665 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 65/409 (15%), Positives = 142/409 (34%), Gaps = 15/409 (3%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R +L F + + + ++ I R +QL L + Sbjct: 99 DREHYLLNKFFFEEPVWDFEELCQELYISRTTLNHVLAVIRDRI-RPYQLQLDVSHQR-V 156 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 +V G R + + F + F ++ + + + + D + +V Sbjct: 157 QVTGKEEAIRHFIMDY----------FFATSFDDSMYAIVDNTFLDHIKFADITI--IVL 204 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 R + + +H L L++ + + +G F + E+QVA I Sbjct: 205 DECRDAKLKLSDFVMHNLVLHIALMVQRIRSGYPLAFFSI-PAAIRQSDEYQVALRILYR 263 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + P +E ++AL + D ++ D LR +K + +L + Sbjct: 264 VEEVMGIRFPKEEANYIALHLKVKHSVDGSPQDNKADDLLRSHLKAGIVKASQLTGMSLE 323 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 + L L H+ R I + N L EE YP T+ A L Sbjct: 324 ADSSLLQGLLAHMKPLATRLENHIQLTNPLTEEIKSKYPEAFALTKQAFENIPELQAYDL 383 Query: 315 SDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSV 374 SD+E +++ A + + ++ H+ +++++ ++ +L + I + Sbjct: 384 SDDEWAYISLHVMAAIERYSNRHKLRVLVVCATGYGSAMMLKNRLEKEFEGRFQIVDVIS 443 Query: 375 KAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + +II+ ++ +F P+I + L+ + IR+ + Sbjct: 444 YYEITQERLQTVDVIISSISLANVMFLTPVITVSVFLSDQDIKAIRQFI 492 >UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax=Streptococcus RepID=A8AYJ7_STRGC Length = 662 Score = 277 bits (708), Expect = 8e-73, Method: Composition-based stats. Identities = 64/411 (15%), Positives = 138/411 (33%), Gaps = 14/411 (3%) Query: 14 PQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 R IL L + ++ V S D + ++ L + L + + Sbjct: 94 DDRYNYILNKLLFEQESIYFDDLADELYVSRSTLSSDFKKIRQD-LSKYDLEIESKPKRG 152 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 V G N R + + F +F L + +K R + ++ Sbjct: 153 VYVTGDERNIRRFIIEF----------FFHDKFFQILHNYIKLEVSGRPISLEELTIIVL 202 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 + C R Q + I L +++ L + G + E E ++A++I + Sbjct: 203 DEC-REGQLKLSDFVIQNLVIHIALSLKRIGEGFQIKQLDSW-SMDEYREEGKIAEKILK 260 Query: 194 HWQRRALQPVPPDEPLFMALLFSML-RVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 P +E ++ L + + +Q+R+ + ++ Sbjct: 261 RVYHSTGLKFPKEEVDYITLHLVSKGNLQTNKCEKEDVAQQIRKQLLFVLEQSNFTHEYP 320 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 F ++ L + L HL+ R + +DN L E Y ++ T L+ Sbjct: 321 FKNDFQLIEGLVAHLSTLFVRLKNHVKMDNPLLAEIQNHYAGVLEMTGNILSAMPIFANE 380 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 LS +E VA+ F L + + + I+++ I+ ++ + I + Sbjct: 381 KLSADEVAYVALHFMTSLERLKEKQKFNILVICATGYGSAQMIKHRIDNELGNLVRIVDV 440 Query: 373 SVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + II+ + +F+ P+ + L + + +IR + Sbjct: 441 IGYYEINDERLKNIDFIISSIDLSNLVFNIPVFTVSIFLNSDEIREIRHKI 491 >UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Listeria RepID=Q723N6_LISMF Length = 653 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 55/430 (12%), Positives = 146/430 (33%), Gaps = 21/430 (4%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + P + +R I L + T+ ++ + ++ E + + + Sbjct: 83 LDNQVSPIPSTKEERVIYIFSKLLKADDYITIHQLADELYISRSTIEKNMVEVTKMLEKE 142 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 +TL ++ + +R L F ++ + L++ + Sbjct: 143 -GITLYKKPSKGMKLLISEREKR-ALTSKFINNFWGNNWYLKQEGEKVLQAFDTIKADVT 200 Query: 122 NFYDDTNLQALV---NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + + L+ ++ S R F + ++L + + AG + Sbjct: 201 GIFPEEGLKEIIAIVQAFSERHDFAFTDYAFQSIVIHLAIAVERIRAGEYIENVESDPMK 260 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR---DAHQRDRQLR 235 + + + + R +P E ++ L + ++ + Sbjct: 261 DVFDSQRNNTEILVSMLEDRLDIKIPAFEVGYIQLHLTAAYNQQHDELLVSVRPKEDDVA 320 Query: 236 QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 + + + ++ L D L TH+ A+NR + N + + +P+ Sbjct: 321 EFVSTCLAEGNY--------DKSLLDDLTTHMKSAINRLKLGMHFKNPYLSKIKQNFPQA 372 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEND-LHEKQIILLTGNDSEREAQ 354 A FE +Y V ++++E+ +A+ F A+ + + +++L+ Sbjct: 373 FEEALYFKAKFEQKYDVQVNEDETAYIALHFEAYKERSRSFPDQIRVVLVCSTGLGSSRL 432 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 + ++++ + K +SV+A ++T L+I+ + L P I ++ Sbjct: 433 LAARIKKYFPMITIEKILSVQALMETEV--DVDLVISTIYLELE--DIPSIVVSPMMSKA 488 Query: 415 QQEQIRKMLE 424 +Q+ +E Sbjct: 489 DLQQVESQIE 498 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 90/334 (26%), Gaps = 59/334 (17%) Query: 21 LLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTV 80 ++ + T + G+ + S + E L+ +T+ +EG Sbjct: 15 IIQFLMKTGQTRVGTIANHLGLSEKTVSNSLKEI-DVFLKDFDMTVVRKPKIGVYIEGD- 72 Query: 81 LNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRL 140 + F F+ +Q +P + R Y + L + Sbjct: 73 -----------NKAFAEVSRFLDNQVSP-----IPSTKEERVIYIFSKLLKADDYI---- 112 Query: 141 QKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRAL 200 IH L L + L++ + + + Sbjct: 113 -------TIHQLADELYISRSTIEKNMVEVTKMLEKEGI----------TLYKKPSKGMK 155 Query: 201 QPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS------------------IKRLV 242 + E + F + + ++ L+ I +V Sbjct: 156 LLISEREKRALTSKFINNFWGNNWYLKQEGEKVLQAFDTIKADVTGIFPEEGLKEIIAIV 215 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 F E + F D + HLA A+ R I+N + ++ T Sbjct: 216 QAFSERHDFAFTDYA--FQSIVIHLAIAVERIRAGEYIENVESDPMKDVFDSQRNNTEIL 273 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL 336 ++ E + + E G + + A Q++D Sbjct: 274 VSMLEDRLDIKIPAFEVGYIQLHLTAAYNQQHDE 307 >UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 Tax=Bacillus cereus group RepID=A0RA54_BACAH Length = 651 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 61/429 (14%), Positives = 141/429 (32%), Gaps = 18/429 (4%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 + S +R IL + ++ +E V +L + + +I Sbjct: 86 LFQKQTEKVPTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKSTVNLIMKDV-TDICG 144 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 +QL + R+ G + R CL + + P ++ Sbjct: 145 RYQLQIEKRPYYGIRIVGEEFHIRSCLSQYGLPRYDHTP----------FHERFEQNDTY 194 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 + +++++ +I L +++ L + + ++ Sbjct: 195 VSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKGLNAEQSELI 254 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRD---RQLRQS 237 E+ +A++I ++ P +E L++ + V R + + + L Sbjct: 255 IKKEYTIAKQIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAF 314 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 ++ ++ E N+ FY ++ L HL LNR + + N L E + YP Sbjct: 315 MQHILFKVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVKKNYPYAFE 374 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIE 356 G + + E G +A+ FG + + + +K+ +L+ ++ Sbjct: 375 IAVLVGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQNQKKRCLLVCATGQGSAQLLK 434 Query: 357 QQLRELTLLPLNIKHMSVKAFLQTGAP--RGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 ++ L I ++ L+ II+ +P P+I + Sbjct: 435 YKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIP-SGLPVPVIKVNSIFDDK 493 Query: 415 QQEQIRKML 423 + + I + L Sbjct: 494 EIKSIGQQL 502 >UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan operon n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMS7_OCEIH Length = 648 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 58/432 (13%), Positives = 139/432 (32%), Gaps = 21/432 (4%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 + + + QR I+ L + ++ + D+ R+ L Sbjct: 82 DMDSRKTPNTPEQRVKYIVRRLLFTMDYIKLEQLADEMYISKSTIQNDMK-LVRQQLNPF 140 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 +L + ++ G + R C+ + + + + + Sbjct: 141 ELDIHVKPSHGIKIIGEEIKIRFCMAEFFVDRENHSHADVKTHC----------EFVTLP 190 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA--- 179 + ++ ++ Q IH L +++ +L+ G FN R Sbjct: 191 DQQMSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFNAAHREEMQDM 250 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-----DRQL 234 + + VA++I +++ P E ++AL ++ D + Sbjct: 251 KDTKAYFVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNIDSTDIESILDPSI 310 Query: 235 RQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPR 294 + I + E ++ + L L HL A+NR + + I N + + YP Sbjct: 311 YKLIMLSLEKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPMLTHIKKNYPL 370 Query: 295 LVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREA 353 + A E + + + + E G +A+ GA + + K+ +++ + Sbjct: 371 AFQAAVYAGVVIEEKTDITIDENEIGYLALHIGAAMERNKLRKGPKRCLVVCASGMGTAQ 430 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 I +L+ + + + L+ LII+ + P+I + + Sbjct: 431 LIYYKLKSKFEGQMEVVGTTEYYRLRDYPLDDIDLIISSIPIK-EDLCIPVIEVNAIIEE 489 Query: 414 HQQEQIRKMLES 425 + I+ + Sbjct: 490 EDLQHIQSFISG 501 >UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ADA7_ENTCA Length = 669 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 61/410 (14%), Positives = 147/410 (35%), Gaps = 14/410 (3%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R+ +L L + + V S DI E +++L+ + + L Sbjct: 91 DRQYFVLNQLLFGQKPVFVDDLAADLCVSRSTISNDIVEI-KQLLKPYTIELKHRTSQGI 149 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 V G+ + R + ++ + S + L+ + Sbjct: 150 YVAGSENSLRHFIMNYFFMNRLQDNLYAFSMYKHLLEGIAIEEIVIIVL----------- 198 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 R+ + I+ + L++ + + AG Q +P + +E+Q A EI Sbjct: 199 DTCRKYFLKLSDFMIYTIVLHIGLAIKRLQAGFEIQLHPQEAN-LAQEVEYQSALEIVEK 257 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ-RDRQLRQSIKRLVNHFRELGNVRF 253 +++ +PP+E ++A+ V + +R+ D +++Q + ++ + Sbjct: 258 IRQQMGIVLPPEEAFYIAIHLKNKLVSETIREQIDLDDNEVKQQLLVVLQKIDQETGFCL 317 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 ++ L D L H+ L R ++N L E + Y + T + Sbjct: 318 AEDPLLIDGLMMHITPLLQRLNNGTSMENPLLETIKKDYSDFFQLTIRHFSDVPFFAPYK 377 Query: 314 LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 +++ E + + A + + + + +++++ ++ +L L I+ M Sbjct: 378 VTEGELAYLTIHLTAAMERLANQQKARVLVICATGIGSSQMLKNRLEHELGSKLVIEEMI 437 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + G LII+ +P + + P++ + L ++I + L Sbjct: 438 SYYEISEQKLAGIDLIISSIKVPDVVLNIPIVTVSVFLDKKDIQKINRQL 487 >UniRef50_A8FDW3 PTS family L-ascorbate (L-asc) porter component IIA n=2 Tax=Bacillus pumilus RepID=A8FDW3_BACP2 Length = 678 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 76/424 (17%), Positives = 155/424 (36%), Gaps = 17/424 (4%) Query: 5 LAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQL 64 + +RR +LL++ + +L V + D+ + +E L QL Sbjct: 71 VGHDYEPCVKERRAILLLSIACNEKYLKIDDLMKLTKVSRNTLLEDMKQL-KEALSKQQL 129 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 TL Y + G RL L ++ R + + LK + Sbjct: 130 TLHYQAACGYLISGEERAIRLALKPYI-HSIRTMIKNEKAFSSFWLKGPISYNR------ 182 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 L+ L+ + L+ F + L L L + + G + ++R + E Sbjct: 183 ----LKHLLEQSEQELKLEFADDMLDQLSLDLFFYFKRMKLGRDIHLSNEEKRTLQETDE 238 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 A Q+ V DE F++ L+ + + + +R ++++ Sbjct: 239 CLAAIRFMARIQKETGLHVHDDEIYFLSTLWLSAKKQKLPSSQNPEEHLIRTIARQMIFD 298 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F+ + F + + L L HL A R ++ I I+N L E + P + T+ + Sbjct: 299 FQRYACISFEEYEALEQNLTMHLIPAYYRLIYHIDINNELTESIKKTQPEVFDITQKVVC 358 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLREL 362 E +S+ E VA+ FG W+ +E + + + + ++ G ++ QL EL Sbjct: 359 HLEKATCSKISEHEMAYVAMHFGGWMRREGISPIVRRSVYIVCGEGIGTSHMLKTQLIEL 418 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 +S +++ + + T P+ P+ LT+++++ + + Sbjct: 419 IGYIEVRDLLSKRSYEEM---SSIDVDFVVSTTPISFKGKPVHLVHPILTSYEKKTLLQY 475 Query: 423 LESA 426 E A Sbjct: 476 GEGA 479 >UniRef50_C0ZED9 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZED9_BREBN Length = 656 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 66/425 (15%), Positives = 135/425 (31%), Gaps = 9/425 (2%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + +L R L L M ++ GV + D+ + + +L +L Sbjct: 85 SKTLILPQKDRVKHFLFILLLSEGYQRMNDLADHMGVSRNTVVADVKDAEK-LLDGWRLE 143 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCP--SFITSQFTPALKSELKRRGIARNF 123 L T RV+G+ ++R L + + + F + + + Sbjct: 144 LVTKQRYGVRVDGSERHKRYALENLIHDLLDGIDMYRMVQGMFLENGQEARTGPLLEKWL 203 Query: 124 YDDTNLQALVNLCSRRLQ---KRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 L +++ + + R + L + L + G + + A Sbjct: 204 ISRAELGEIIHSIKAWMNAAAETLADRALISLLIRLCIVFHRVQRGQLVTADDAELGEAR 263 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 +++ R +R +P E + L A + + Q+ K Sbjct: 264 HWSGYELFSHEVRALCQRLHVDIPEHEIAYACLPLLGTEQVPREARAGRIVLDVFQATKE 323 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L +++Q L L+ HL +LNR + N L EE R Y R+ + Sbjct: 324 LTEAVSNRMLAPLHEDQELMRLLFAHLDDSLNRYRQGVLFANPLTEEIRRSYARMFDAVK 383 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 + + GV+ D + + F A + + + +++ G ++ L Sbjct: 384 RSCEEVFWQRGVYWLDADIAYFVLHFQAGYDRWLEQKKADALVVCGTGRGTSRFLKTYLE 443 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + S + A R +II+ + P++ T QI+ Sbjct: 444 SELRSLRVVGLCSSTEVEKYLASRRVDVIISVLPIKAE---VPVVIVSPLPTRQDINQIQ 500 Query: 421 KMLES 425 LE+ Sbjct: 501 NCLEA 505 Score = 58.2 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 2/77 (2%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R +L + + + V + D+ R+ L+ + L + + Sbjct: 7 RSHALLKVILDSYYPLKIKDVARDFQVSERTVKYDLDNV-RQWLKERNVILHSQPNKGLW 65 Query: 76 VEGTVLNQRLCLFHWLR 92 + R L L+ Sbjct: 66 IT-EEQEHRNALKENLQ 81 >UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=14 Tax=Streptococcus RepID=Q1JGE0_STRPD Length = 664 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 61/416 (14%), Positives = 142/416 (34%), Gaps = 15/416 (3%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 V + R +L F + + ++ I+ +QL L Sbjct: 91 TQVEESVDREDYVLHKFFFEDAVQDFEELCQELYISRTTLKHVLAGIKERII-PYQLELE 149 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + ++ G + R + + F + F L + + + + + Sbjct: 150 ITHQH-IQIRGKEEDIRHFIMDY----------FFVTSFDNTLSTMVGNTFLEGINFAEI 198 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 + +V R + + ++ L L++ + + +G + + E+QV Sbjct: 199 MI--IVLYECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLELFSI-PIAIRQSDEYQV 255 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A I + P +E ++AL + D +L+ +K + + Sbjct: 256 ALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDEKLQDHLKACIAKISQ 315 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 L + + L L H+ R I + N L EE YP + T+ + Sbjct: 316 LTGMTLETDTNLFQGLLAHMMPLTTRLENHIQLTNPLTEEIKSQYPEIFTLTKQTFSDLL 375 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 +SD+E +++ A + + ++ H+ +++++ ++ +L + L Sbjct: 376 VCQNNDVSDDEWAYISLHLMAAIERYSNRHKLRVLVVCATGYGSAMMLKNRLEKEFEGRL 435 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I + + + LII+ ++ +F P I + L+ E IR+ + Sbjct: 436 RIVDVISYYEITEERLKTVDLIISSISLANLMFLTPAITVSVFLSNQDIETIRQFI 491 >UniRef50_C6J1G7 PTS system IIA 2 domain-containing protein n=2 Tax=Bacillales RepID=C6J1G7_9BACL Length = 697 Score = 273 bits (700), Expect = 7e-72, Method: Composition-based stats. Identities = 65/418 (15%), Positives = 142/418 (33%), Gaps = 24/418 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 LSA +R I+L + ++ F+ GV + D+ I L + Sbjct: 84 NYNLSAEERANLIILMMLSKNEELSLFHFTHALGVSKNTILRDLKNAQDAI-SPLHLEIK 142 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 Y +EG NQR L + + L+ Sbjct: 143 YSRMHGYYIEGNEFNQRQALIDIVHKTLETYGG------ENWLRELAGAAPS-----QVA 191 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 L+ + +L +F + + L L + G + + E++ Sbjct: 192 ALRRKIEAVESKLNLKFTDEKLESMPYILLLLLRRVKQGRVVEGFHIHYDELSDTKEYRA 251 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 +E+ + P+P +E +F+ L + + +L +++ +++ F Sbjct: 252 VEELLSELE-----PIPMEERMFITLHLLTTNISSTDYLSDDTLPELNRALSEMLSQFER 306 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 V D++ L +++ HL A R + + I N L E ++ + L + + Sbjct: 307 NACVTLQDKEQLHNKILLHLKPAYYRIKYRLSITNPLQESVSKEFKELHHLVKKSCGPLV 366 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQEND--LHEKQIILLTGNDSEREAQIEQQLRELTLL 365 G + + E+ + ++ G W ++ D + + +++ +E LREL Sbjct: 367 ELIGAEIPESETTYLTMLIGGWCTRQGDSIRQKIRALVVCPKGVCVSRLLESTLRELFPE 426 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +SV+ F ++ + +P L L + ++RK + Sbjct: 427 FVFFDALSVREFHNYAL--EYDVVFSTVYLPTDKK---LFLIKTFLGKEDRYRLRKQV 479 >UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=Staphylococcus aureus RepID=A5IPR4_STAA9 Length = 651 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 59/420 (14%), Positives = 149/420 (35%), Gaps = 21/420 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R I L LF+ + ++ V + DI + L + L L + Sbjct: 85 FSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRTIADDIKMI-QAQLDQYHLKLNYVH 143 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + + V G + R H++ + + FI + + L RR I + + Sbjct: 144 NKGFNVIGEEDHYRKAYAHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSE---- 199 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 I L ++ + + + + + ++ +A + Sbjct: 200 ----------NYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRHTNQYAIASK 249 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLR-VPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + +R P E +F+ L + L Q+I L+ + Sbjct: 250 MIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQEL 309 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + + L L TH+ A++R + + N L +E R YP+++ ++ E + Sbjct: 310 GIDMSKDNKLHTSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQD 369 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHE--KQIILLTGNDSEREAQIEQQLRELTLLPL 367 + +++E + + F + + + + +++LL G+ ++ +L L Sbjct: 370 AAIRFNEDELTYITIHFASSIERVATHKQSMIKVVLLCGSGIGTSQLLKSKLNHLYPEFH 429 Query: 368 NIKHMSVKAFLQTGAPRG-AALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA 426 S+ ++ + +I+ + + P+I+ D + ++++ +++ + Sbjct: 430 IWDAYSIYQLEESRLLQDNIDYVISTVPCEIS--AVPVIHVDPFINQQSRQKLNQIINDS 487 >UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42D0A Length = 713 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 68/426 (15%), Positives = 151/426 (35%), Gaps = 15/426 (3%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + P+ + +R+ +L L Q + T ++ GV S D+++ + L+ L Sbjct: 82 SEPNEYTPWERQQLLLSILLQEREPVKLFTLAKEIGVTIATISNDLNKI-NDWLQSFDLE 140 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + ++G +R+ L + ++ + LKSEL + + Y Sbjct: 141 MVRKRSYGIEIQGDEPKKRMALRRLITDKVSE-EELVSILESYRLKSELGEQASEKLLY- 198 Query: 126 DTNLQALVNLCSRRLQKR-----FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 +L ++ + + R L ++L + + G + + Sbjct: 199 LIDLNVILKVLETLHELRRDGEPIADVSYVGLAVHLSLAVDRIKRGEKIEKHSEGFEKVL 258 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR-QLRQSIK 239 E++ A+ + + + +P E ++A+ + D Q + K Sbjct: 259 KTNEYEAAKRLVKKLEETFSIDIPQIEVAYVAMHLLGAKQGDDGSFFFQETSLDIAMRAK 318 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 +L+ V ++ L + L +HL AL R + I N++ Y L T Sbjct: 319 KLIEAVGVRTEVALINDHSLLEGLISHLKPALFRMEQGMKIYNSMLPAIKEGYAPLFNTI 378 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQL 359 + + DEE G + + FG+ + + + I++ + + +L Sbjct: 379 KECVVEIFPT--WSFPDEEIGYLVMHFGSAIERSKKKAVIKAIVICSSGIGTSKLLATRL 436 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 + I HMS Q P ++I+ + + P + L+ + ++I Sbjct: 437 EKEIPEIQGITHMSAFDITQDQIPDHT-VVISTVPL---MSIDPYFLVNPFLSKKEVDRI 492 Query: 420 RKMLES 425 R+ + S Sbjct: 493 RQYIHS 498 Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 88/324 (27%), Gaps = 35/324 (10%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LSA +R I+ L + T+ ++ V DI ++L ++LTL Sbjct: 3 LSARER--HIIQYLIEAEQGITIKEIADRLNVSTRTIHRDIQGIE-QMLTQYELTLERQS 59 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 ++ G + L + L L+ R + F + Sbjct: 60 GVGLKLTGRDTKKIEL--KELITESEPNEYTPWERQQLLLSILLQEREPVKLFTLAKEIG 117 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + S L + L + + + GI Q + ++R Sbjct: 118 VTIATISNDLN-KINDW----LQSFDLEMVRKRSYGIEIQGDEPKKRM------------ 160 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 +R V +E + + R+ L + + ++ Sbjct: 161 ---ALRRLITDKVSEEELVSI---LESYRLKSELGEQASEKLLYLIDLNVILKVLE--TL 212 Query: 251 VRFYDE-----QGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + L HL+ A++R I+ L + + Sbjct: 213 HELRRDGEPIADVSYVGLAVHLSLAVDRIKRGEKIEKHSEGFEKVLKTNEYEAAKRLVKK 272 Query: 306 FESEYGVHLSDEESGLVAVIFGAW 329 E + + + E VA+ Sbjct: 273 LEETFSIDIPQIEVAYVAMHLLGA 296 >UniRef50_B0KCW5 Transcriptional antiterminator, BglG n=9 Tax=Thermoanaerobacter RepID=B0KCW5_THEP3 Length = 680 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 67/424 (15%), Positives = 143/424 (33%), Gaps = 7/424 (1%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + +L+ QR+ + + L A FS V + SL + + E L+ Sbjct: 78 LGAIPLQWLLTPEQRQILMTIQLLLSEEPIKAAYFSYQFNVVEGTISLYLDKIE-EWLKM 136 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 L+L +VEG+ L++R + + Sbjct: 137 RNLSLIRRRGYGIKVEGSELDKRNAIVELFYNYKPIEELLAFVYNDEKDNYVYTFFSTVF 196 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + ++ + + + + ++L + + Q N + Sbjct: 197 DNELVQLVKRIAQQIKNVIHGHLSDLNYFGMFVHLLVSIYRTKIDKPIQLNDEFVKDILL 256 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 EF ++ + +P E ++AL S + + L+ K + Sbjct: 257 SNEFIFMKD-VEKILKENEVYLPDAELAYLALHLSPKKYVYKQNRFEELGISLQDLSKEV 315 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 V L N++ ++ L L H AL R + N L EE Y L + Sbjct: 316 VEEVSRLLNIKINCDEQLIVGLSQHFEPALYRLTMGLQTTNPLVEEIKNYYGDLFKAVNK 375 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLR 360 A S+Y + + +EE G + + GA + ++ L +K ++ ++ N + +L+ Sbjct: 376 ACKLIFSKYNLMIPEEEIGYITMHIGAAIERQQALSKKLRVFVICPNGIGTARILSAKLK 435 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 L I ++ + + LII+ + + +I LT +++ Sbjct: 436 TLFREVDAIDIGAIWEYKK--KGDNYDLIISTVKLEDLKDN--VIVVSPFLTEEDIKKVE 491 Query: 421 KMLE 424 + +E Sbjct: 492 EFIE 495 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 96/313 (30%), Gaps = 32/313 (10%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R+ IL TL + S+L V +I+ L+ ++ + Sbjct: 7 RQKFILKTLL-EKGPSNREDLSKLMDVSGRTIMREIASINNN-LKKYKAVIVEDNGQ-II 63 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 ++G + + Q ++ L I ++ + Sbjct: 64 LKGEEEALDKIHASLGAIPLQWLLTPEQRQILMTIQLLLSEEPIKAAYFS-YQFNVVEGT 122 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 S L K E + L L + + GI + + L +R A L + + Sbjct: 123 ISLYLDKIEEWLKMRNLSL-----IRRRGYGIKVEGSELDKRNAIVELFYN-----YKPI 172 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + ++ ++ F + D +L Q +KR+ + + + D Sbjct: 173 EELLAFVYNDEKDNYVYTFF-----------STVFDNELVQLVKRIAQQIKNVIHGHLSD 221 Query: 256 EQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 ++ HL ++ R+ I +++ ++ + + E V+ Sbjct: 222 --LNYFGMFVHLLVSIYRTKIDKPIQLNDEFVKDILLSNEFIF---MKDVEKILKENEVY 276 Query: 314 LSDEESGLVAVIF 326 L D E +A+ Sbjct: 277 LPDAELAYLALHL 289 >UniRef50_A8GHY9 Transcriptional antiterminator, BglG n=4 Tax=Enterobacteriaceae RepID=A8GHY9_SERP5 Length = 421 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 171/423 (40%), Positives = 241/423 (56%), Gaps = 5/423 (1%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 AP LS QRRC +LL L+ P + T S++NGV I DI+E EI R+H Sbjct: 4 DTAPVPELSGQQRRCHLLLMLYAPVPAVQLETISQINGVSPPITRQDIAEVASEIQRFHH 63 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 L + D YR+ G+ LNQRLCL HWLRR R P FI F+ L+ L + Sbjct: 64 LEIDGNPDEGYRIRGSALNQRLCLLHWLRRALRCSPEFIDQHFSRWLQQALGQSADLTP- 122 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 L+ ++ + + F+ RD FL YL+YC ++ P F+P QR W Sbjct: 123 ----QLEQCISEYEALVNRSFDRRDRQFLQHYLRYCAWENQRRRHPTFSPAQRDWLHQKP 178 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 E Q + + + P E F+ L+F+ML+ + D +L +I+ +V Sbjct: 179 EHQATLLLHQSLNQLFALPPETSENDFLVLMFTMLKNHSYHSNDSTEDLRLMAAIENMVE 238 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F+++ + F ++ L QL+ HLA A+ R F IGIDNTL EE R YPRL+RT + AL Sbjct: 239 RFQQISGMTFSSKEDLISQLFAHLAPAVERCRFEIGIDNTLLEEVERKYPRLMRTAQEAL 298 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 A E EYG+H S EE+GLVA+ FGAWLMQ N L EKQ++LLT ++ + E ++E Q+RELT Sbjct: 299 APLEQEYGIHFSSEEAGLVAISFGAWLMQGNALQEKQVLLLTLDNPQLEDEVEYQIRELT 358 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 LLPLNIK++ ++ +L +GAP+G L+I PY PPLIYT+L L Q++ IR +L Sbjct: 359 LLPLNIKYLPLRDYLHSGAPQGVTLVITPYATEHSAPQPPLIYTELPLARQQRKFIRALL 418 Query: 424 ESA 426 E++ Sbjct: 419 ETS 421 >UniRef50_Q5E1U1 PTS system, mannitol (Cryptic)-specific IIA component n=2 Tax=Vibrio fischeri RepID=Q5E1U1_VIBF1 Length = 640 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 71/418 (16%), Positives = 143/418 (34%), Gaps = 25/418 (5%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S +A R +++ L + + V D+ E RE L + L L + Sbjct: 86 SPRNAKDRMVYLMMRLLSQEEECKLDDLANQWFVSRTSLQADMGEI-REQLEQYNLELIS 144 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 R+ G R C+ H L + F P+ + + + + Sbjct: 145 KAHCGLRLFGEEQAIRACIAHILFQ------------FKPSDHTFIDVCEYFFPEINQPS 192 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 L+ + + + +H L +Y L + S + A Sbjct: 193 LKTDLLELINKNHIKLTDEGLHHLVVYCGVALHRLKQNACIHHVDQPN---LSEEAQKTA 249 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 E+ + + P+P E ++++ + RV Q+ + + + L+++ Sbjct: 250 AELSQTIESLLGAPLPQAEIDYLSIQIAARRVTGVPEIDTQKPTEQLELTQYLLDYVNTH 309 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 N +++ L L H+ + R + I I N L + R YP T AA++ + Sbjct: 310 YNYDLRNDEQLKRDLLCHITTMILRVKYQITIPNPLFDHIKRYYPLAYDMTVAAISHWGK 369 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEK---QIILLTGNDSEREAQIEQQLRELTLL 365 + D E G + + G L + L E+ + +L+ + + +E QL Sbjct: 370 HL---IPDGEIGYLVMHIGVGLERNFSLEEQLPPKALLVCDSGTSIVRLLESQLIRSLPQ 426 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K S++ + + T + + P I T+ Q EQ+ K++ Sbjct: 427 LTIEKVESLRDYEE---LSKVDADFVISTEKVSQKNKPTITVSPIPTSFQLEQVNKLI 481 >UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus pneumoniae RepID=B2ISN0_STRPS Length = 659 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 65/411 (15%), Positives = 148/411 (36%), Gaps = 14/411 (3%) Query: 14 PQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 R IL L + ++ V S D + R +L + L++ + + Sbjct: 97 DDRLVFILNKLLFEQVPVLFDDLADELYVSRSTLSHDFRKI-RVMLSEYNLSIESRANKG 155 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 V G ++R + ++ F+ +QF + +K + + + ++ Sbjct: 156 VYVSGEERDKRRFIINY----------FLENQFFKTIHCYVKFNFFDQTVPLEEFARIVL 205 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 + C + + + L +++ +++ +G + + + +E +VAQ I Sbjct: 206 DEC-QEANLKLSDFVLQNLVVHIALSVIRLKSGFEIKNIDC--QMTDDAIERKVAQRILS 262 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 + Q P E ++ L + + L++S+ + + F Sbjct: 263 KVREVTNQEFPVQEIDYITLHLLAKSQQCQKNQKNISEEVLKKSLFKTFQNLGLDDMYNF 322 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 + L + L THL R I ++N L +E + Y + TR LA + Sbjct: 323 SSDFQLIEGLITHLMTLQVRLESRITLNNPLVDEIKQNYSDIFFMTREILANMDKFLEWT 382 Query: 314 LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 +SD+E V++ F A + + + + I+ + + +L + + + Sbjct: 383 ISDDEVAYVSLHFLAAMERSKESTKFNILAICATGFGAAQMLRNRLETEFGKRVEVVDVI 442 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 L +G I++ + F P+ + L + + E IRK ++ Sbjct: 443 GYYELNQEKLKGIDFIVSAVDLSNLYFQIPVFKVSVFLKSDEMEMIRKAMD 493 Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 34/333 (10%), Positives = 87/333 (26%), Gaps = 43/333 (12%) Query: 10 VLSAPQRRCQILLTLFQPGL-TATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 VL+ + IL L + T +E D + + ++ + L + Sbjct: 3 VLNIKE--KDILQFLIKNKERFVTSKELAEYLSCSDRTVRNVLKLIEKTMIIQ-GVRLIS 59 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 Y++ +F + E A + DD Sbjct: 60 KQGQGYQI-------------------FFENQGAYQEFRQTYELEEDYTKTAVSKGDDRL 100 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 + L L ++ F+ + + + + +E + Sbjct: 101 VFILNKLLFEQVPVLFDDLADE-------LYVSRSTLSHDFRKIRVMLSEYNLSIESRAN 153 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 + + + R + + F+ F + + L + + +++ +E Sbjct: 154 KGVYVSGEERDKRRFIIN--YFLENQFFKTIHCYVKFNFFDQTVPLEEFARIVLDECQEA 211 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDN---TLPEEFARLYPRLVRTTRAALAG 305 + L H+A ++ R I N + ++ + + L+ Sbjct: 212 ---NLKLSDFVLQNLVVHIALSVIRLKSGFEIKNIDCQMTDDAIER-----KVAQRILSK 263 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHE 338 +E + + A Q + Sbjct: 264 VREVTNQEFPVQEIDYITLHLLAKSQQCQKNQK 296 >UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Bacillaceae RepID=C1PAW0_BACCO Length = 639 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 66/415 (15%), Positives = 134/415 (32%), Gaps = 19/415 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 R IL L + +F + V D+ +EIL + L L Sbjct: 94 DKDTRVLYILRRLLLETDFIKIESFIDEMFVSLSTLQNDLKMV-KEILDQYHLKLINRPH 152 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 +VEG +RLCL + L R +F+ + EL + ++ Sbjct: 153 YGSKVEGDEYMKRLCLSNLLLE--RNQEAFLKEDCLQLIDPELFK-----------KIKE 199 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ + + + L ++ + G + + E VA EI Sbjct: 200 VIVQKVNKYKIEISDISLENLATHIAIACRRIQEGFVIEE-LADVLVDDHPFEKIVANEI 258 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + + P E ++ + ++ + + I ++ + N Sbjct: 259 IKEVEDFTSLTFPETEIDYIIVHLLGTKLLHKKELAEFSKFDEAGTIINCMLARLKAELN 318 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 F ++ L H+ A+NR + + I N L + + YP A E Sbjct: 319 WDFRQDREFIQALTLHIRPAMNRLRYKMNIRNPLLNDIKKKYPAAFEGAIIASKCIEEYL 378 Query: 311 GVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 + + ++E +A+ G L + N K+++++ + + +L+ L + Sbjct: 379 RMEVVEDEIAYIALHIGVALERMKLNKKKIKKVLIVCASGVGSAKLLSYRLQNLYGQEIE 438 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I L + LII+ + F P+ + L + I L Sbjct: 439 IADTINYYNLSSYDLSFIDLIISTVPIK-EDFGVPVQVVNTFLEDKDIQAINGFL 492 >UniRef50_A8S9A5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9A5_9FIRM Length = 705 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 74/424 (17%), Positives = 137/424 (32%), Gaps = 22/424 (5%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 LS +RR Q+L L A + GV + S D+ E + L +++ Sbjct: 126 GDRKELSRAERRQQLLTRLLSEQEPCKTAVLARALGVSESTLSADLDELETK-LHPYRVE 184 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + ++G + R + LR S + L + I D Sbjct: 185 MFRRPGVGVWLQGDASSYRRVVSALLR------SSMPEKELAEVLCGRMPENEIFSTLLD 238 Query: 126 DTNLQAL---VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + + + + Q L ++ + Q G P R A + Sbjct: 239 TKTAEKVWAALQQFEQEEQLHLPDAGFLALAIHCTLTIQQLRQGGDKGSAPRGLRPAGNH 298 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 A + R +PP+E ++ L + + + Q +LR L+ Sbjct: 299 -----AARLVAALNRAFGLTLPPEEAQYLELYLAAYLGAEDPWGSAQE-MELRNLEAALI 352 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + + L D LY HL L R I +N + YP L + TRAA Sbjct: 353 REMEKALHTDLSGYTSLRDDLYCHLRPMLLRVEQNIRTENPQLDTIRTAYPGLWKATRAA 412 Query: 303 LAGFESEYGVH-LSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLR 360 + ++ + +SD+E+ +A+ FGA L Q ++++ + +L Sbjct: 413 CDAVQQQFVLPAISDDEAAYLAMHFGAVLEQNAMFRLRLRVVVACPLGMGSSRFLASRLG 472 Query: 361 ELTLLPLNIKHMSVKAFLQTGA-PRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 SV+ R II+ + L P + +L + + Sbjct: 473 NEFPSLQVEGCCSVRELNTADLRRRKIDFIISTVPLEL---DYPAVCISPSLLEPDRAVL 529 Query: 420 RKML 423 + + Sbjct: 530 KDAI 533 >UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETM8_9FIRM Length = 711 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 62/426 (14%), Positives = 147/426 (34%), Gaps = 11/426 (2%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 T + + P+R + L F+E + + + D+++ + + Sbjct: 85 DTNSSAPADNRPERLTLLCHDLLLAEEPIKSYYFTEKFEISEGTLTADLNQLETWFTK-Y 143 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 QL L +EGT + +R L ++ + S Q L I Sbjct: 144 QLKLVRRPGLGVFIEGTEIARRQALTSFICKQVNEHHSIGNLQDKKFLSDRNFINEIDGE 203 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + ++ C ++L + L +Y C+ + G + Sbjct: 204 VM--AEVNHILGGCQKQLGMQLSDNGYLHLLVYTSLCVQRMQKGRFIKELKQSYAEISIQ 261 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDA--HQRDRQLRQSIKR 240 E+ V++ I + ++ + DE ++MA+ S R+ ++ + Q Sbjct: 262 PEYAVSEYIMKELRQFFHLSISVDETIYMAVFISGQRIWPSGSRDLTDIKNLDVHQITLS 321 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 ++ E+ ++ F + L +L H+ + R I ++N L +EF YP + + Sbjct: 322 IIKKVNEILHINFMRDSRLLTELSGHIQPTIARLRAGIPVENPLLKEFQESYPSVYKACE 381 Query: 301 AALAGFESEYGV-HLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQ 358 L+ G+ + E G + + F + + E ++ + ++++ + + Sbjct: 382 EGLSLLCPILGIKKVPASEIGFITLYFTMAMERIEKEIKKLSVMIVCPTGIGSSRLLTES 441 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRG-AALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 L++ S L+I+ + + + P I+ + LT + Sbjct: 442 LKKEYPDLDIRGITSAFELDNIRLQEEGVDLVISTVKLEI---AYPYIHVNPILTRQDKI 498 Query: 418 QIRKML 423 + + Sbjct: 499 LLDSRI 504 Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 83/320 (25%), Gaps = 36/320 (11%) Query: 16 RRCQILLTLF--QPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 R +I+ L P T+ SE GV D ++ + ++++ Sbjct: 6 RADKIIRILLRFSPDSPVTIGIISEELGVSDRSVQRELPTVEK-WMKHNGFCFVRKRSVG 64 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 + +RL L S L +A Sbjct: 65 LLI--DETPERLKELAALLDEKDTNSSAPADNRPERLTLLCHDLLLAEEPIKSYYFTEKF 122 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 + L + F L+ + + G+ + + RR + I + Sbjct: 123 EISEGTLTADLNQLETWFTKYQLKL-VRRPGLGVFIEGTEIARRQ-------ALTSFICK 174 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 + ++ D ++ + ++ ++ ++ Sbjct: 175 QVNEHHSIG-----------NLQDKKFLSDRNFINEIDGEVMAEVNHILGGCQKQLGMQL 223 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL-----VRTTRAALAGFES 308 D L L + + + R I E + Y + + + Sbjct: 224 SDNGYL--HLLVYTSLCVQRMQKGRFIK-----ELKQSYAEISIQPEYAVSEYIMKELRQ 276 Query: 309 EYGVHLSDEESGLVAVIFGA 328 + + +S +E+ +AV Sbjct: 277 FFHLSISVDETIYMAVFISG 296 >UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WHN0_STRDG Length = 661 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 66/408 (16%), Positives = 153/408 (37%), Gaps = 18/408 (4%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL L T ++ V S D + R L +QL++ + Sbjct: 96 RHKAILNKLIFKEETVLFDDLADQLFVSRSTLSSDFKKI-RSQLAKYQLSIESKPYRGVY 154 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 V G ++R + + F F + + + + + + +++ Sbjct: 155 VLGDEQDKRHFIMDY----------FFGEHFHQNMSNFVGKDILDIPLSMEELTIIVLDE 204 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 C + + + I L ++L + + G P++ + E VA+ I Sbjct: 205 CRNQ-ELKLSDYAIQNLVIHLALAIQRFQKGFRI--APVELCECKYQKELLVARNIADRL 261 Query: 196 QRRALQP--VPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 R Q +P +E ++AL V + +A+ + LRQ + +++ F Sbjct: 262 ANRLGQEELIPEEETAYIALHLISKSVAEQDPEANLLN--LRQELITALDNCDTSQGYDF 319 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 + L + L HL L R + I +DN L E+ + Y +++ T L + + Sbjct: 320 SSDMALIEGLLMHLEVLLERLVNNIHLDNPLLEDIQKRYGDVLKLTENFLGDLPTFQKYY 379 Query: 314 LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 LS +E V++ F A + ++ + H+ ++++ ++ ++ + I + Sbjct: 380 LSQDEIAYVSLHFMASIERQKEKHKLTVLVICATGFGSAQMLKNRITNELGQLVTISDVI 439 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 L + I++ + +F+ P++ + L+ + ++ ++ Sbjct: 440 GYYDLDNDKLKDVDAIMSTIDLSNLVFNIPVLTVSVFLSDQEIQEAKQ 487 Score = 58.6 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 85/317 (26%), Gaps = 44/317 (13%) Query: 18 CQILLTLFQPGLTATMAT-FSELNGVDDDIASLDISETGREI-LRYHQLTLTTGYDGSYR 75 IL L+Q + + ++ D I + ++ + T+ + Y+ Sbjct: 7 KIILQYLYQHRGDYSTSKVLADYLSFSDRTIRTYIKKLSTDLPVEDTGFTIVSKQGYGYQ 66 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +E L F + + + + K F ++T L Sbjct: 67 LE--------VLDDDTYHHFLVKNNLAVGMDYGDIDNRHKAILNKLIFKEETVL------ 112 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 L L + ++ ++Q++ E + + Sbjct: 113 -------------FDDLADQLFVSRS--------TLSSDFKKIRSQLAKYQLSIE-SKPY 150 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF--RELGNVRF 253 + + D+ F+ F + + +D + E N Sbjct: 151 RGVYVLGDEQDKRHFIMDYFFGEHFHQNMSNFVGKDILDIPLSMEELTIIVLDECRNQEL 210 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 L HLA A+ R I E Y + + R + G Sbjct: 211 KLSDYAIQNLVIHLALAIQRFQKGFRIAPVELCE--CKYQKELLVARNIADRLANRLGQE 268 Query: 314 --LSDEESGLVAVIFGA 328 + +EE+ +A+ + Sbjct: 269 ELIPEEETAYIALHLIS 285 >UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5P5_9FIRM Length = 720 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 54/432 (12%), Positives = 149/432 (34%), Gaps = 23/432 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 L+ R I++ L T+++ +E V + + + E + + Sbjct: 86 DVYLTEEDRFNYIIIKLLTANNPITISSIAEELYVSRSSLNKTMKKVY-EWFDEQGIDVI 144 Query: 68 TGYDGSYRVEGTVLNQRLCLF----------HWLRRGFRLCPSFITSQFTPALKSELKRR 117 + + + + R + ++ + + P + Sbjct: 145 SKTNYGILLNCSENKWRKAVIKLSNNKEHRGYFYSLLHKASNDSDDNYLNPTNYILPLYK 204 Query: 118 GIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRR 177 + D + ++ L+ +F+ L ++L + + G + Q Sbjct: 205 EALFDEEDLYKIIDSISYLEDLLETKFDDSSYVSLLIHLAIAMKRLKKGNKILMSDEQLE 264 Query: 178 WAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS 237 ++ E+ V++ ++ +P +E ++ + R L + D++LR+ Sbjct: 265 QLKNEDEYSVSKSFAKYLNTIFDIDIPDEEIGYITIHLMGARRFFILAND---DKELREV 321 Query: 238 IKRLVNHFRELGNVRFYDE--QGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 + +++++ +++ N ++ L L HL A++R ++ I+N + Y + Sbjct: 322 VIKIIDNVQKILNKSIDNKYIDDLIKDLTVHLKPAISRLKNSLMIENPILGTIKGKYMDI 381 Query: 296 VRTTRAALAGFESEYGVH-LSDEESGLVAVIFGAWLMQEN--DLHEKQIILLTGNDSERE 352 + + +Y + + D+E + + GA L + + + I + + Sbjct: 382 FSAVEKSCFIIKEKYYIENIPDDEIAYITMHIGASLEKSRVIKSKKIKAITMCASGLGTS 441 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLT 412 + +++ + I +S+ R A +II+ + P+I L Sbjct: 442 KMLSSRIQREFPMIEIIGEISIFD---ASRYRKADVIISTIDTYIKTE-IPIIRVTPLLD 497 Query: 413 THQQEQIRKMLE 424 ++I L+ Sbjct: 498 NKDIKKIEDFLD 509 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 36/316 (11%), Positives = 93/316 (29%), Gaps = 18/316 (5%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL +L ++ + V + + DI L+ + +G++ Sbjct: 6 RELLILKSLMLADKGIRISYLTNKFKVSERMIRYDIDNI-NYFLKSINAFIDKDRNGNFI 64 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 + + +F + L L + Sbjct: 65 LNIKEEDIAKLKEEINNFAVTDVYLTEEDRFNYIIIKLLTANNPITISSIAEELYVSRSS 124 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 ++ ++K +E D + + N + +W ++ ++ +E ++ Sbjct: 125 LNKTMKKVYEWFDEQGIDVI-------SKTNYGILLNCSENKWRKAVIKLSNNKEHRGYF 177 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + + ++ + PL D + I +++ +L +F Sbjct: 178 YSLLHKASNDSDDNYL----NPTNYILPLYKEALFDEEDLYKIIDSISYLEDLLETKF-- 231 Query: 256 EQGLCDQLYTHLAQALNRSL--FAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 + L HLA A+ R I + + E+ +++ + + + Sbjct: 232 DDSSYVSLLIHLAIAMKRLKKGNKILMSDEQLEQLKNE--DEYSVSKSFAKYLNTIFDID 289 Query: 314 LSDEESGLVAVIFGAW 329 + DEE G + + Sbjct: 290 IPDEEIGYITIHLMGA 305 >UniRef50_C5EW03 Phosphoenolpyruvate-dependent sugar phosphotransferase system n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW03_9FIRM Length = 670 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 64/422 (15%), Positives = 137/422 (32%), Gaps = 13/422 (3%) Query: 13 APQRRCQILLTLFQPG--LTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 R+ +L + G T SE V S ++ G + L + L + Sbjct: 84 QDDRKYYMLRRILCTGPGHVLTETRLSEELFVSRSSISRELDAIG-QWLGNYNLQIEKRR 142 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + ++G ++R + S Q + + G D +++ Sbjct: 143 NHGISLKGKEFDKRRAIAELFFTKEADAGSDYARQVPDLSGYQKEMLGTIIPDTDTASIK 202 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + + +R RD L L++ L + G T F+ ++ +E Sbjct: 203 SFIRALEKRHDSIQTHRDYVTLFLHIALSLYRSKNGCTVDFSETDDFILKAASADVYREE 262 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDP-----LRDAHQRDRQLRQSIKRLVNHF 245 I R +Q + E ++ L + +R + + + + Sbjct: 263 IDRCFQDKMGYAPKESERDYIFLYVIFSGIFRNAGMDYMRSSILESARFGSFVHEFLEMV 322 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + + L + L HL+ + R + I N L E YP + + A Sbjct: 323 SSVLGINIPQDGHLYENLKYHLSDMICRMKIGMTIRNPLLHEIKDKYPSVFGASWAFSIL 382 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 FE +G+ ++D E +A Q N + ++ I ++L+ Sbjct: 383 FEKYFGLMVNDNEIAFIATYLLTAREQLNY-YTVTACIVCNYGVSVAQLICEKLKYRFPN 441 Query: 366 PLNIKHMSVKAFLQTGA--PRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ + F Q ++I+ PL ++ LT ++ I K++ Sbjct: 442 IHVTDVLAYEKFRQLCQGGDGNWDMVISTIG-PLEERQT-VVCVSPILTEEDEKSIEKLV 499 Query: 424 ES 425 ++ Sbjct: 500 KT 501 Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 30/319 (9%), Positives = 70/319 (21%), Gaps = 37/319 (11%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 ++ +R+ I+ L T ++L ++ D+ + ++ + Sbjct: 1 MNKSKRQKLIIKILADSDTALTCRKLAKLLDTSENTIRNDLDDIEGKLRESGAGAVERKP 60 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 RL L + + + G Sbjct: 61 GVG---------IRLVLVNQAFLQMDTQELGGQDDRKYYMLRRILCTGPGHVLT------ 105 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + R G LQ + +E Sbjct: 106 ----------ETRLSEELFVS---RSSISRELDAIGQWLGNYNLQIEKRRNHGISLKGKE 152 Query: 191 IGRH--WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 + + + + + D SIK + + Sbjct: 153 FDKRRAIAELFFTKEADAGSDYARQVPDLSGYQKEMLGTIIPDTD-TASIKSFIRALEKR 211 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEE--FARLYPRLVRTTRAALAGF 306 L+ H+A +L RS +D + ++ + R F Sbjct: 212 H--DSIQTHRDYVTLFLHIALSLYRSKNGCTVDFSETDDFILKAASADVYR--EEIDRCF 267 Query: 307 ESEYGVHLSDEESGLVAVI 325 + + G + E + + Sbjct: 268 QDKMGYAPKESERDYIFLY 286 >UniRef50_Q8NVE5 MW2083 protein n=56 Tax=Staphylococcus RepID=Q8NVE5_STAAW Length = 710 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 69/416 (16%), Positives = 136/416 (32%), Gaps = 9/416 (2%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 LS +++ I+ L Q + ++ GV + + + + L +QL+L+ Sbjct: 87 DLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELD-LNKYQLSLSRK 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + GT +R L + + + S + + N+ Sbjct: 146 RGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNV 205 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + L+ L + L +++ + + G N ++ E +VA Sbjct: 206 ERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVAS 265 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 E+ + E F+ + + L D +R IK VN + Sbjct: 266 ELADKLGQIYDVTFNQAEIAFITIHLRGAK-RKNLNDTSLNNRCEENKIKAFVNKVEMIS 324 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + F D L D L HL A+NR I N L + YPRL R AL Sbjct: 325 GMTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDC--W 382 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 + + E + + FG + + I+++ + + +L ++ I Sbjct: 383 PDLIFPESEIAFIVLHFGGSI-KNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERI 441 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 SV L++ II+ + + P + + L + + L + Sbjct: 442 TQASVSD-LKSLDLSQYDGIISTVNLDIDS---PYLTVNPLLPDSDISYVAQFLNT 493 >UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Clostridium RepID=A6LX09_CLOB8 Length = 714 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 59/421 (14%), Positives = 141/421 (33%), Gaps = 19/421 (4%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 M + V+S +R I+ L + T+ + +E V + D+ E + +L Sbjct: 79 MESINSYDYVMSQKERIIYIIYKLLEKNSYLTINSLAENMFVSRGTINNDLKEVRK-LLE 137 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 + + L + + G N R + + + + Sbjct: 138 GNNIKLQSEKSKGIKAIGDEKNLRKVVSNLMLENVADSDLIGVN------------FKKL 185 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 D + ++ +L+ + L +++ + + + + + Sbjct: 186 FKDMDIEFIGNVIKTAEDQLESTLSDYSFNNLLIHIAIAIKRIELAKDIVMDDNELKNLS 245 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 EF +A + R + R +P E +M + V + + ++ Sbjct: 246 KTCEFSIASAMARMLENRYDIKIPKSEIGYMTIHLLGSNVMLK-EEKNDDLVYIQLISAT 304 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L++ + F ++ L + L H+ + R + I+N L +E Y + Sbjct: 305 LISEVGKRTKYNFEADEHLLEGLIQHIRPMIYRLKHGVSINNPLLDEIIYKYKEVFTLVE 364 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQ 358 +L E + +S EE G + + F A L + +L++ +++++ + + + Sbjct: 365 ESLIFLEKDLNAEISKEEIGYITLHFMASLERIKNLNKIKPRVLVVCATGAGTSKFVSIK 424 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 L+ + I +S + LI T+P+ + I LT + Sbjct: 425 LKSIF-DINIIDTVSSHDIEKIAKREPIDLI--ITTIPINIIGIRCILVSPFLTEKNISE 481 Query: 419 I 419 + Sbjct: 482 L 482 >UniRef50_C6CCS2 PTS modulated transcriptional regulator, MtlR family n=79 Tax=Enterobacteriaceae RepID=C6CCS2_DICDC Length = 641 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 64/418 (15%), Positives = 148/418 (35%), Gaps = 22/418 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++ +R +L+ + +E V D++E RE+L + L++ T Sbjct: 88 PRTSTERVQSLLVRFLTSAFAFKLEDVAERWFVSRPTLQSDMAEV-REVLGRYHLSIETR 146 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 ++ G+ ++ R CL + + + + + AL E + L Sbjct: 147 PRYGMKLLGSEVSIRTCLTDLVYQMVQDDGGEAPTLPSTALDRE-----------TLSRL 195 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 Q +++ R R +L LY + + G + + E A Sbjct: 196 QVILHDVFSRSGIRMTDEAECYLGLYCAVAIRRIGEGYPLS-DFTAEDVDDDVRE--AAH 252 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQL-RQSIKRLVNHFREL 248 ++ + + + E ++ + + R+ + +A + ++++ Sbjct: 253 QLISVMRAMTGKAISASEEAYLRVNLAARRIQELSGNASAISPDDGESLVDYILSYINTH 312 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 N ++ L L TH+ + R + I I N L + YP T AA++ + Sbjct: 313 YNFNLQNDPQLRADLLTHIKTMITRVRYQITIPNPLLTNIKQHYPMAYDVTLAAVSSWSK 372 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ---IILLTGNDSEREAQIEQQLRELTLL 365 +S+ E G + + G L + D+ ++ ++L+ + I+ L Sbjct: 373 YTPYVISENEVGFLVLHIGVGLERHYDVGYQRHPQVLLVCDTGNSTIRMIQAMLWRRYPQ 432 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S++ + +I+ L P++ T +Q EQ+ K++ Sbjct: 433 MVVNNIISLRDYRTLPEVEE-DFVISTT--RLAEKGKPVLVMSPFPTDYQLEQLGKLV 487 >UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C483_LISGR Length = 691 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 74/421 (17%), Positives = 143/421 (33%), Gaps = 15/421 (3%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + +R+ IL T+ + + + GV S D+++ E+ + + Sbjct: 85 EYTPLERQQYILKTILKSDEAVKLIALANDLGVTVATVSNDLTKMEEELDES--VRIERK 142 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD--- 126 R+ GT +R L + L F F Q P + + D Sbjct: 143 RGSGVRLIGTETAKRTLLTNLLGEQFSEANLFRLMQEQPEEEGAKQAASERLLHLIDRKL 202 Query: 127 -TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 ++ ++ ++L+ + L +++ + + AG L+ A+ EF Sbjct: 203 IQKVEKVLRNWRQQLEYQITDDAYISLVIHIVISIDRMLAGHFI--YELRNENAKRYPEF 260 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI--KRLVN 243 Q A+EI VP E + + + + ++ K+L+ Sbjct: 261 QTAKEIIAECLEMEADVVPDGEAGLVTMHIRGAKALHYDSGDFTGNEHIQAVTVAKQLIT 320 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 + R Q L L HL L R + I N L + + YP L +AA Sbjct: 321 SVEAKIDRRLDQ-QTLLKGLTAHLRPTLRRLHENMRIHNPLVKSIKQDYPELFDIVKAAF 379 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 + DEE G + + FGA ++Q N+ I++ + + +LR+ Sbjct: 380 TEIYQSGN--VPDEEIGYLVLHFGAAILQGNEEKVYSGIVVCASGIGTSRMLVTRLRQAI 437 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ +S+ +II+ + L P + LT + +I L Sbjct: 438 PALKKLQTVSLFELPLQMKKENYDVIIST--IDLGNVDFPYFFVSPMLTEREVSEIEVFL 495 Query: 424 E 424 Sbjct: 496 N 496 Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 107/315 (33%), Gaps = 28/315 (8%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R I+ + T + ++ V + D+ E L+ L L + Sbjct: 6 RARLIMEYILTSKEAITTSALADYMSVSERTIRRDLKEIETT-LQGFHLELQRE-NTILT 63 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +EG +++ + L + Q+ LK+ LK + +L V Sbjct: 64 IEGNEADKQAFKWQLLDLSYNEYTPLERQQY--ILKTILKSDEAVKLIALANDLGVTVAT 121 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ-EIGRH 194 S L + E ++ + +R + L Q ++ + R Sbjct: 122 VSNDL-TKMEEELDES----VRIERKRGSGVRLIGTETAKRTLLTNLLGEQFSEANLFRL 176 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 Q + P +E + R H DR+L Q +++++ ++R+ + Sbjct: 177 MQEQ-----PEEE---------GAKQAASERLLHLIDRKLIQKVEKVLRNWRQQLEYQIT 222 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 D+ L H+ +++R L I L E A+ YP +T + +A + Sbjct: 223 DDA--YISLVIHIVISIDRMLAGHFIY-ELRNENAKRYPE-FQTAKEIIAECLEMEADVV 278 Query: 315 SDEESGLVAVIFGAW 329 D E+GLV + Sbjct: 279 PDGEAGLVTMHIRGA 293 >UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAI9_9FIRM Length = 696 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 58/435 (13%), Positives = 147/435 (33%), Gaps = 20/435 (4%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + + QRR + + + + ++ V + S DI + H L Sbjct: 87 SSLFYYTKEQRRALLTIEFLKRKHIEKLGYYAYKLMVSEATISNDIQAVRPWFQK-HSLA 145 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN--- 122 L V G N R + +L ++ + + +N Sbjct: 146 LERKAGLGITVTGEEENFRSAIIDFLNEKLMRADVEQFQDSRGEFRALEYFQNLGKNSNM 205 Query: 123 ----FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + ++ C R L ++L + + +G T R Sbjct: 206 DLLNEEILDKVIKILKKCEDEFLSRITRHSYIGLVIHLVIAIERLLSGKTITMEEELLRA 265 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQ-- 236 + ++ A+E+ +++ VP E ++ + R+ + + + L + Sbjct: 266 LKEDPYYKKAKELTAYFEEEFHIEVPESESAYVFMHLKGARMKYAVEKQDELTKMLDEYD 325 Query: 237 ---SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 L+ F L F ++ L L +HL L+R + + ++N L ++ + Sbjct: 326 CMIVADDLIAAFGRLMGDDFSQDKVLYQGLASHLRATLHRLNYHMRLENPLLDQIKEDFR 385 Query: 294 RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE----KQIILLTGNDS 349 + ++ E++Y + ++++E ++ FGA + ++ + + ++ + Sbjct: 386 DIFAICKSVCKVMETKYHLEVNEDEIAYLSFHFGAAIERKKAQIKQSVILNVAVVCASGI 445 Query: 350 EREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDL 409 + + ++ + + +SV+ G +II+ + LP P++ Sbjct: 446 GISSFLSSSIKSRFAGTVRVSPLSVEQV-ALREAEGMDIIIST--LKLPDQGIPVMEVGA 502 Query: 410 TLTTHQQEQIRKMLE 424 L +++ E Sbjct: 503 LLKEEDFGRMQAYFE 517 Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 91/328 (27%), Gaps = 39/328 (11%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R+ ++ L M +E GV +I RE L + L T R Sbjct: 9 RQIKLFQILLGQDQYLPMDQAAERLGVSTRTLFREIQGINRE-LGGLSVYLETKTGKGIR 67 Query: 76 VEGT---------VLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + G +++R + +T +F E + + Sbjct: 68 LSGDRESFAGCLEEISKRD--SSLFYYTKEQRRALLTIEFLKRKHIEKLGYYAYKLMVSE 125 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + + QK L + AG+ + + + ++F Sbjct: 126 ATISNDIQAVRPWFQKH-------------SLALER-KAGLGITVTGEEENFRSAIIDFL 171 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 + + ++ E + + + ++ + +++ Sbjct: 172 NEKLMRADVEQFQD---SRGE----FRALEYFQNLGKNSNMDLLNEEILDKVIKILKKCE 224 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALA 304 + R L HL A+ R L I ++ L + + A Sbjct: 225 DEFLSRITRHS--YIGLVIHLVIAIERLLSGKTITMEEELLRALKED--PYYKKAKELTA 280 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQ 332 FE E+ + + + ES V + M+ Sbjct: 281 YFEEEFHIEVPESESAYVFMHLKGARMK 308 >UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TNE9_LACRL Length = 644 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 65/410 (15%), Positives = 141/410 (34%), Gaps = 15/410 (3%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL L + ++ +E+ + + ++ R+++ L R Sbjct: 93 RERYILSELLRSQDYISIDQLAEVLFISRRVIQRNLDNLNRQLIGT-DTELLRIPGRGVR 151 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +EG +R LF L + + S + + + L +V Sbjct: 152 IEGEEGKKRKVLFKMLSQYWDSDWRMDQSSEGWTADPAIAENPNIDSSVVNI-LARVVQN 210 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 S +L I L ++L + + AG N R + + + A ++ Sbjct: 211 ASEKLGLSLSEYAIQSLVIHLAIAINRIKAGNPIGQNDDLIRNIGNERKSE-AVQLAAMV 269 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 ++ +P +E ++ + + + +K L++ F Sbjct: 270 EKEVNVRLPDEEIAYIQIHLIAASANQVSLANQHSMIPIPERLKELLH--------PFGY 321 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 ++ L L H+ A+ R GI N E+ R YP+ +E + ++ Sbjct: 322 DRDLLFGLTVHMQAAVKRLRVNAGISNPYTEDIKRNYPQAFDEALIVSDDYERTEHISMN 381 Query: 316 DEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSV 374 D+E VA+ A+L + +H++ ++ + ++R +K S+ Sbjct: 382 DDEVAYVALHIEAYLERRRAIHQRVNAAIVCSTGLGSAQLLAARIRREFSDISIVKIWSL 441 Query: 375 KAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + F Q + G LII+ + LP P + ++ +R ++ Sbjct: 442 QDF-QRNSLVGIDLIIST--LRLPKGDIPTVTVSPVMSDSDALLVRNLVR 488 >UniRef50_C6IZU2 PRD domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZU2_9BACL Length = 707 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 75/422 (17%), Positives = 139/422 (32%), Gaps = 15/422 (3%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 PS S +R ++ L + + T + V S D+ E L L Sbjct: 91 PSDYSVEERHLLLICRLLEEQEPCKLFTLAHGLKVTVATISSDLDEVEP-WFSRFGLELV 149 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + G +R L I + S R + Sbjct: 150 RRRGYGVELLGEEQQKRAALCQLAAEHLDYSD-LIGGSPENQVSSATARLLEVVGTDNLM 208 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA----ESCL 183 ++ + + + L + L + + AG R+ Sbjct: 209 TVENTLWAMNWSWTEHLSENAYTQLLIRLSVSVNRIKAGRLVSCAGKNRKLPPVGGGEQD 268 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 E + A+ + PP+E +M LFS + + + Q D +L ++ RL Sbjct: 269 EAETAR-FASRLAEKLELTFPPEEIAYMNGLFSRAK--EASPELVQADMELVDTVYRLTE 325 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 + + + F +++ L L H+ A R I N L + Y L R A+ Sbjct: 326 NVVKRTGIPFQEDRLLRSGLLEHMGPAFKRIREGSRIRNPLLGAIRKDYDELFGIVREAM 385 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLREL 362 ES G+ + DEE G + + FGA + + N L + IL+ + + +L + Sbjct: 386 N--ESVAGLEIPDEEIGFLVMHFGASMERLNQLGLSVRAILVCSSGLSSSKLLATRLAKE 443 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + ++S + LII+ +PLP + LT E++ + Sbjct: 444 MPQIEVLGNVSWYEA-KRLPESDYDLIISTIDLPLPEDR--YVKLSPLLTDEDTERLLEY 500 Query: 423 LE 424 ++ Sbjct: 501 VQ 502 Score = 60.9 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 17/136 (12%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R+ QIL+ L T A + V ++ E + IL Y L L Sbjct: 7 RQKQILVLLLGRKHGMTAAEIAAEINVSVRTVHRELDEIEK-ILAYFGLVLHRKSGTGIS 65 Query: 76 V----EGTV------LNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 V EG+ +RL L + + + + L+ + + F Sbjct: 66 VWSNAEGSEEGEKLQEAKRLLLVD------KPSDYSVEERHLLLICRLLEEQEPCKLFTL 119 Query: 126 DTNLQALVNLCSRRLQ 141 L+ V S L Sbjct: 120 AHGLKVTVATISSDLD 135 >UniRef50_UPI00017890F3 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017890F3 Length = 689 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 61/420 (14%), Positives = 137/420 (32%), Gaps = 9/420 (2%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 P+ S +R+ +L L + + + V S D+ E ++ L L Sbjct: 88 PADYSVEERKILMLCALLEADEPIKLFALAHSLKVTVPTVSNDLDELEP-WMKRFNLKLI 146 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 ++G +R + ++ + R + Sbjct: 147 RRRGYGIEIDGAEGVRRRAIGRLAEEYLDYSDLVGDG-YSDTREPVTARLLSMIDKPALL 205 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 +++ + + + + L + + G + + + S + + Sbjct: 206 DVEKTLWDMNWDWTEDLSESAYTSTLIALSVSVNRIKRGRGMEAADI-AGYPPSPVSVEE 264 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A + E +++A LF + + + D ++ + RL+ + Sbjct: 265 AGDFVGRLGETLEMNFRESEMIYIAQLFEAAKNMSEVSELVHADVEMVEIAHRLIERVQG 324 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 + F +++ L L H+ AL R I N L + Y L R ++ Sbjct: 325 RTGIPFQEDRTLRAGLVEHIGAALKRIREGTRIRNPLLSPIRKDYEELFGIVRRSVDEL- 383 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQEND-LHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 + + + DEE G + + FGA + N H + IL+ + + +L + Sbjct: 384 -KLDLSIPDEEIGFLVMHFGASSERLNQPEHHLKAILVCSSGLSSSRLLGTRLNKEMPQI 442 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA 426 + ++S + LII+ +PLP + LT +E + + ++S Sbjct: 443 EVLGNVSWYEAARIPK-EQYDLIISTIDLPLPKDR--YVRLSPLLTADDKEALLRFIQST 499 Score = 43.6 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R+ QILL L T A + GV ++ E +++ + L R Sbjct: 9 RQRQILLLLMSRTDGMTAAEIAADVGVSVRTVHREMEEIEKDLQGT-GVVLLKKSGTGIR 67 Query: 76 VE 77 +E Sbjct: 68 LE 69 >UniRef50_C6DIT7 Transcriptional antiterminator, BglG n=5 Tax=Pectobacterium RepID=C6DIT7_PECCP Length = 516 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 60/416 (14%), Positives = 138/416 (33%), Gaps = 15/416 (3%) Query: 16 RRCQILLTLFQ-PGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 RR +I L +++ SE + D+ L L L Sbjct: 97 RRVKIASQLLSDTPHETSISKLSERYFISSASIVNDLKIIES-WLHPLGLALVRSQS-GT 154 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 +EG+ R + + + + K D + +++L+ Sbjct: 155 HIEGSENQVRHAMASLINDVMHHKEPGPLNH-SRLDPGSYKALINYFGEEDVSFVESLLQ 213 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 R+L + + + + G F +AQ + Sbjct: 214 DMERQLSYPLGEPYYINIFTHTLIMMHRIAQGKALMMAEESVHQQVDNRIFSIAQNMVSQ 273 Query: 195 WQRRALQPVPPDEPLFMALLFSML------RVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 ++R +P DE F+ R + L + + R+ L F +L Sbjct: 274 IEQRVESTLPSDEVWFIYQYIISSGIVMEERADNQLLRYQFSNGESRRITHALTQIFSDL 333 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 N+ ++ L + L H+ LNR + I I N L ++ + + T+ A+ Sbjct: 334 INIDLRTDKLLHEGLLIHIKPLLNRLKYQIHIRNPLLDDIKSEFIDIYDMTQQAMDEVCQ 393 Query: 309 EYGVH-LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + + ++++E G + + F A L ++ + K+I+++ + ++ ++ + Sbjct: 394 RFQLKPVAEDEIGYLTIHFQAALERQ--IAHKRILVVCSSGVGTSHLLKNRILRAFPDWI 451 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S + LII+ + L P++Y +++ + + Sbjct: 452 IVGVVSASNMQRFCQQEEIELIIST--IHLEEQHIPVVYVSAFFNDDDIKRVTEKV 505 >UniRef50_C5EFX5 Transcriptional antiterminator of lichenan operon n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFX5_9FIRM Length = 632 Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 53/416 (12%), Positives = 125/416 (30%), Gaps = 23/416 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S R +L L + + V S + +ILR ++L++ + Sbjct: 87 SGQARSEYLLAYLLFRREYVKIEQLCDFIYVSKTTLSHYLKSVE-DILRRYRLSIERRPN 145 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ G + R + + + + L+ I+ + L Sbjct: 146 YGIKIRGEEFDMRRLISDYFIK-----------------RHCLEGVDISHQEEEMAALAR 188 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 V + Y + AG + + E QE+ Sbjct: 189 QVRKLMANYEVHLSEISFENFVDYTYVAWKRMKAGYYLKMDRENLPEI-GVKEQAFIQEL 247 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRD---RQLRQSIKRLVNHFREL 248 + DE ++ L + R+ + + Q + ++ Sbjct: 248 LGILAKEKGISCTQDEENYLLLYLAGKRMIGNIVENDSNFVIHEQTDRLALEMIRLVDHD 307 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 ++ F + L HL R + I + N + +E Y + + + + + Sbjct: 308 FHMDFLKNFEMRMTLNQHLVPFDVRMRYDIPLKNPMLQEIKEKYSLAYQMSGVSCSVLKE 367 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 Y + ++E G A+IF L + + I+++ ++ + + LN Sbjct: 368 YYHREIPEDEVGYFALIFELALEKGDLERRLDILVVCSTGKGTSRLLKYKYEQEFSEFLN 427 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 ++ L++ I + S P++ + L T +++ +L Sbjct: 428 SIYVCDLIGLESFDLSLVDYIFTTVPI-TMKVSVPIVEVGMFLGTEDIQRVTDVLR 482 >UniRef50_C0CV60 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CV60_9CLOT Length = 699 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 54/419 (12%), Positives = 128/419 (30%), Gaps = 16/419 (3%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 L+ +R I+ L +T+ ++ V + D+ +E R + + L Sbjct: 83 YTDRLTGEERMLLIVFDLCWSNGYSTIQDIADKYFVSRTTVNADMVAV-KEYCRKNGINL 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + ++ + +R L +R L + + G+ + Sbjct: 142 ISQRGKGLCIDADEVGRRKYLSKVIRDFTALTGDRTDCDRS-IYAQWFEEDGLNK----- 195 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 ++A+V + L +++ + + R L++Q Sbjct: 196 --IKAIVTDVEEAFATYLDDIAYEALVIHIALSIKRFRLDEEYGEPKAADRIERDSLQYQ 253 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 +A EI R +P E ++A+ + + D L +L+ Sbjct: 254 MALEIVRRVNECFRIRLPDAEISYVAVH-MGAKSSAITKQEASGDVLLEFYCIKLIAGVS 312 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + + L + L H++ R+ + ++N L +E YP L + Sbjct: 313 KRIGYDLTSDDRLYEFLIQHISACTYRTKNGMLLENPLKDELIHNYPELYGAIKDTFPAV 372 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTL 364 + +D+E + + F A + + E+ ++++ + L Sbjct: 373 GGLNLIVPTDDEIAYILLHFAAAINRRKQNAERLVNVVVVCATGIGTAELVVTGLNRNFK 432 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 L + ++ + LII + + L ++ K L Sbjct: 433 LNIR-GTVARHQLEKFLKKEDVDLIITTVPLQTRKT---FVKVSPLLKRDDIVRVSKQL 487 >UniRef50_B8DAY8 Transcriptional antiterminator, BglG n=24 Tax=Listeria RepID=B8DAY8_LISMH Length = 688 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 79/417 (18%), Positives = 156/417 (37%), Gaps = 20/417 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 V SA +RR +IL L + T +E N V + + DI + + L+ L L Sbjct: 88 VFSASERRIRILFFLLVTDARVIIDTINECNEVSRNTSLQDIKQL-KLALKQFNLELVYD 146 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 V G + R H+ T+ L F + Sbjct: 147 RKNGNMVLGDERSIRQFFIHYCMNN----EEIATADQLLDLMKINPMIKNQELFPKLDTI 202 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 ++ + +++ R+ + + + + + + + F++AQ Sbjct: 203 FEILAVTEKKIGIRYTDEVLERIGIMIFFFKERMKRNCYL-----NEQEEHEVESFEIAQ 257 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 EI + Q+ + E ++ L L D + +L +++++ F L Sbjct: 258 EIYQQLQQSENFKMNHAEITYLGKLLLGA---SRLNDDAAAEGKLDLIVEKIIAEFERLA 314 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 V F D + L L HL A R F I N L + + Y + T+ +L E Sbjct: 315 CVNFEDHRNLKKDLLLHLQPAYYRLKFQIEWINPLRTDIKQSYSDVYEITKKSLEPLEDL 374 Query: 310 YGVHLSDEESGLVAVIFGAWLMQEND--LHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 G + ++E V ++FG +L ++N+ + K+++++ IE+QL +L + Sbjct: 375 LGETIPEDEIAYVTILFGGYLSRKNNTLVERKKLLIVCSKGVGTSRMIERQLSQLLGERV 434 Query: 368 NI-KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I + +S++ F + T+P+ P+ LT Q++Q+ K + Sbjct: 435 EILEPISIREFEKGLYAPD----FIVSTLPIMEPKAPVFIVSPILTEAQKQQLMKAI 487 >UniRef50_C6D7L7 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7L7_PAESJ Length = 687 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 75/425 (17%), Positives = 156/425 (36%), Gaps = 14/425 (3%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + +++ S +R+ +L L + + T + V + D+ + + ++ Sbjct: 78 LVSVSEEIEFSPEERQIYLLCLLLESEEPVKLFTLAHEFKVTIPTVANDLDDL-DQWVQR 136 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 ++TLT + G + R + +R F I+S+ S +R Sbjct: 137 FEVTLTRRRGYGIELTGQEEHLREMIRQIIRDRFE-DTELISSRNELPAHSLDRRLLAIV 195 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + ++ ++ R L + L L + AG T + + ++ ES Sbjct: 196 GQSEMEAVEKILWSWEEYGGSRLSESAYTDLLIRLSIALRRIRAGKTVEASSVEALRQES 255 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 A + + PP E ++ L ++ D L D L +++ L Sbjct: 256 D-----AVYLTERLAALTERTFPPSETAYIGRLLRSVQS-DDLSVLPADDLVLTDTVRSL 309 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 + + + + ++ L D L+ HL AL R I N L ++ + Y L R Sbjct: 310 IEYAQHAMGADYNKDRSLRDGLFLHLKDALQRLNEGTNIRNPLLDQIKKDYASLFNVVRK 369 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREAQIEQQLR 360 A + + DEE G + + FGA L + L + + IL+ + ++ +L+ Sbjct: 370 AANRV--FTDMVVPDEEVGFLVMHFGASLERLKQLRQNVRAILVCSSGIGSSKLLQIRLQ 427 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + + +S +T LII+ +PL I LT + +++R Sbjct: 428 KELPEIHIVDRVSWYEASRTEK-DKYDLIISTVDLPLNGEQ--YIKVSPLLTQAETDRLR 484 Query: 421 KMLES 425 +++ Sbjct: 485 VFVQT 489 >UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 Tax=Streptococcus RepID=B9DU03_STRU0 Length = 655 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 63/406 (15%), Positives = 133/406 (32%), Gaps = 15/406 (3%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R I+ L + V S D + E L + L + + + Sbjct: 94 DRHNFIINQLIFEQKEIFFDDLMDQLYVSRSTLSSDFKKIRHE-LARYDLKIESRANKGV 152 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 V G N+R + + F + F + + + +++ Sbjct: 153 YVSGAEHNKRHFIMDY----------FFSGNFLKNIHQYVGDDFFKLPISFEELTIIVLD 202 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 C + + I L +++ + + + G + + + E VA I R Sbjct: 203 ECRSQ-SLKLSDFVIQNLIVHIALAISRVNDGFKISQLSIDEKKFK--TEILVATNILRR 259 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + P +E ++AL + ++ +R LRQ + +F Sbjct: 260 VEYVTGTDFPTEEINYIALHLISESIHTDNSESLERIS-LRQDLSEAAAEIDLHYGYQFA 318 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 + + L HL L R + +DN L ++ Y +R+ ++ HL Sbjct: 319 QDFTFIEGLLKHLEVLLERVKNNVRLDNPLLDDIQSQYKEAFVISRSLMSHLNYFKEFHL 378 Query: 315 SDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSV 374 SD+E V + A + + ++ +++ + +L LNI ++ Sbjct: 379 SDDEIAYVTLHLLAGIERFYQNNKLNALVICATGYGSAQMLRMRLENELGRQLNIVNLVG 438 Query: 375 KAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + G LII+ + +FS P+ + L + + I+ Sbjct: 439 YYDITDARLEGIDLIISTIDLSNLVFSVPVFTVSVFLKDEEVQMIK 484 >UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9M5_9FIRM Length = 698 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 71/424 (16%), Positives = 146/424 (34%), Gaps = 19/424 (4%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 RR ++L L + + + +S+L GV + + D+S G L + L L Sbjct: 93 RRNRLLFELIRDKVPRKIYYYSQLLGVSEATINKDMSALGP-WLEQNHLKLVKRQGFGVA 151 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 + G+ + R + ++ L + I A + + R T+ + V Sbjct: 152 LSGSERDLRAAMRRYVSENMSLPWAGIEGLKESAAGALIHTRDQNLYALLATDTVSRVYE 211 Query: 136 CSRRLQKR------FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 R++K L +L + + G + +P + E+ +A Sbjct: 212 VLARMRKEETRLKGLAESAYTNLIFHLAIAVERVKKGAIVEEDPGLVNKLGTWDEYALAG 271 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-----DRQLRQSIKRLVNH 244 +I +R +P E ++ L ++ +A R + L + I R+++ Sbjct: 272 KIRGEIEREFSIHMPDQELSYILLHLLGSKMAYHETEAENRQFLFPEEDLLEIIDRMIDQ 331 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F ++ L HL A+ R + I N + E R YP + +R A Sbjct: 332 FDTEMANSLKCDEEFIRGLIMHLQPAMFRMSEKMSIYNPVLPEIKREYPEIYAKSRRAAE 391 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ----IILLTGNDSEREAQIEQQLR 360 E +SD+E G +++ FGA + + K+ I ++ + + +L Sbjct: 392 VIRDETAFEVSDDEIGFLSMHFGAAVERVRKREGKRRRVSIGIICSSGFGVAQLMIARLT 451 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + + ++ + R + + I + E+IR Sbjct: 452 RVFGQEAELSAYALSDLTEHVERR-TDFFVTTFDWCADEIDS--IRVSPMVPESDLEKIR 508 Query: 421 KMLE 424 +E Sbjct: 509 NKIE 512 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 85/316 (26%), Gaps = 23/316 (7%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R ILL L ++ GV ++ LR + L L Sbjct: 6 RIRGILLLLMDAEGPLKEDDIADQVGVSRRTVQREVEYLDGA-LREYGLLLHRKKGVGIS 64 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 V G+ + L P+ + + L ++ + + +Y L+ + Sbjct: 65 VTGSEQAKERLRGE-LEEKEAGEPTDVAGRRNRLLFELIRDKVPRKIYY----YSQLLGV 119 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + K + +L+ G + +R + + V++ + W Sbjct: 120 SEATINKDMSALGPWLEQNHLKLV---KRQGFGVALSGSERDLRAAMRRY-VSENMSLPW 175 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 L A ++ + + R+ L + Sbjct: 176 AGIEGLKESAA-----GALIHTRDQNLYALLATDTVSRVYEVLARMRKEETRLKGLA--- 227 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNT--LPEEFARLYPRLVRTTRAALAGFESEYGVH 313 + L HLA A+ R ++ L + E E+ +H Sbjct: 228 -ESAYTNLIFHLAIAVERVKKGAIVEEDPGLVNKLGTW--DEYALAGKIRGEIEREFSIH 284 Query: 314 LSDEESGLVAVIFGAW 329 + D+E + + Sbjct: 285 MPDQELSYILLHLLGS 300 >UniRef50_B6EP62 HTH-type transcriptional regulator n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EP62_ALISL Length = 656 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 70/419 (16%), Positives = 146/419 (34%), Gaps = 25/419 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 S +A R +++ L + + V D++E REIL + L + Sbjct: 101 TSPRNAKDRVVYLIMRLLSQEEECKLDDLANQWFVSRTSLQADMTEI-REILEQYNLEIV 159 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + ++ G R C+ H L + F P+ ++ + + Sbjct: 160 SKAHHGLKLFGEEQAIRACIAHVLFQ------------FKPSDRTFINVCDHFFPEINLP 207 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 +L+ + + R +H L +Y L + + S Sbjct: 208 SLKEDLLTLINQNHIRLTDEGLHHLLVYCGITLHRVKLNSVIHHVHQPKI---SNEAQNA 264 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A ++ + + P+P E ++++ + RV ++ + + L+++ E Sbjct: 265 ALDLSKTIEVLLSAPLPQSEIDYLSIQIAARRVTGVTIVDTEKHTEQLELTHFLLDYVNE 324 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 N +++ L L H+ + R + I I N L + R YP T AA++ + Sbjct: 325 HYNYDLRNDELLKRDLLCHITTMILRVKYQITIPNPLVDHIKRYYPLAYDMTVAAISHWG 384 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQE---NDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 + D E G + + G L + + + +L+ + + +E QL Sbjct: 385 KHL---IPDGEVGYLVMHIGVGLERNFALEEQQPPKALLVCDSGTSIMRLLESQLLRSLP 441 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K SV+ + A +I+ + + P I T+ Q EQ+ K++ Sbjct: 442 QLDIQKIDSVREYESLTKV-DADFVISTEKV--SQKNRPTITISPLPTSFQLEQVNKLI 497 >UniRef50_C1I943 BglG family transcriptional antiterminator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I943_9CLOT Length = 715 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 59/433 (13%), Positives = 138/433 (31%), Gaps = 17/433 (3%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 ++ S +R+ I+ L F+ L + S D+ + L+ Sbjct: 91 LLEIERIEKEYSKEERKRIIISELLISKDPIKSFYFTSLLKTSEGTLSNDLDSIE-DWLK 149 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSF--------ITSQFTPALKS 112 + L VEG + R L + L + S Sbjct: 150 SFNIKLVRKPGLGVYVEGKENDYRKALTNILYETLEEKELINLLKGSLITNRENGIVEFS 209 Query: 113 ELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFN 172 R + ++ +V+ + R L ++L + + + + Sbjct: 210 IENRLLNFIDKSIIKAIEEIVSGLEKENDIRLVDSAYIGLVVHLSLAIQRIKNKENIKID 269 Query: 173 PLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR 232 P EF++ + + R+ + + +P DE ++ + ++ + D Sbjct: 270 PDVLEELAKLPEFEIGKMLVRNIESKFNIEIPVDEIGYITMHLKGAKLRLNSVSKLEEDI 329 Query: 233 ---QLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFA 289 +++ K +V + N+ D++ L L HL A++R + I N L Sbjct: 330 ANLDIKRIGKNIVEVVEKELNIFLKDDERLLKDLTNHLVPAISRLKMKLNIRNPLLNNIK 389 Query: 290 RLYPRLVRTTRAALAGFESEYGV-HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGND 348 YP T+ A + V + D E + + A + ++ + ++++ Sbjct: 390 EKYPMEYNATKKACEILKLNTKVDEIPDSEIAYITMHIAAAIYKKGLEEKIKVVISCPTG 449 Query: 349 SEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRG-AALIIAPYTMPLPLFSPPLIYT 407 + + L I +S + + +I++ + + + I Sbjct: 450 IGTSSLLAALLEREFNNVEVIGTISAINIDEDKLKKDEVDIIVSTVPLDINFKN---ICV 506 Query: 408 DLTLTTHQQEQIR 420 D L+ H + ++ Sbjct: 507 DPILSLHDKGLLQ 519 >UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A809_9CLOT Length = 721 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 64/427 (14%), Positives = 143/427 (33%), Gaps = 17/427 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 + +R+ IL L F + + + + D E E L + L Sbjct: 93 YTKEERKKFILSNLLTSSEPIKSYYFYKTLKISEGTLNNDFIEIE-EWLDNFSIKLIRKP 151 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCP-----SFITSQFTPALKSELKRRGIARNFYD 125 VEG+ + R + F + + E+ N D Sbjct: 152 GTGIYVEGSEKDMRSAQVRLIYNSFEEQELIDIVKNVGNNIQKHNVIEISSENRLLNLID 211 Query: 126 DTNLQAL---VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + ++ + ++ + + + L +++ + + G T +S Sbjct: 212 KSIIKKVENSLSETIKDINLKISDSAFIGLVVHISLAVQRLRNGETISMEQDVLNELKSI 271 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ--RDRQLRQSIKR 240 +F+ A +I + + VP DE ++ + ++ ++ + D +L KR Sbjct: 272 EQFKTATKIAQQIEEEFDIKVPIDEIGYITMHLRGSKLRLETKNHNFSLDDVELMNIAKR 331 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+ + F ++ L + L H+A +L R + I N L + Y + Sbjct: 332 LIELATDEFGFDFSTDKKLLNDLVNHMAPSLCRIKMGMDIRNPLLNQIKTEYKDIYDGVA 391 Query: 301 AALAGFESEYGVH-LSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQ 358 + + + + + + E +A+ FG+ + + + E + + + Q Sbjct: 392 NIIYIIKEKLDIDNIPESEIAYLAMHFGSCMERNLIEEVEIRAVACCPTGIGTSRFLMTQ 451 Query: 359 LRELTLLPLNIKHMS-VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 L++ + +S +K + G LII+ M + S + L Sbjct: 452 LQKKFSNLKMVDTVSAIKIDEKALKDEGIDLIISTVEMETSIIS---VVVSPLLNLEDVA 508 Query: 418 QIRKMLE 424 +IR +L Sbjct: 509 KIRHVLR 515 Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 37/332 (11%), Positives = 93/332 (28%), Gaps = 35/332 (10%) Query: 16 RRCQILLTLFQ--PGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 R+ +I+L L Q T++ ++ + D+++ L + Sbjct: 9 RQKEIILLLAQNTSNKPITISEVAKELNISTRTVLRDMTKIES-WLDENDFKFIKKPGVG 67 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 ++ L+ + + L+ + L + L +++Y + Sbjct: 68 IYLD-ETLDSKQFIIELLQEEKIEKSYTKEERKKFILSNLLTSSEPIKSYY----FYKTL 122 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQH-HAGITPQFNPLQRRWAESCLEFQVAQEIG 192 + L F I L++ GI + + R A+ L + Sbjct: 123 KISEGTLNNDFIE--IEEWLDNFSIKLIRKPGTGIYVEGSEKDMRSAQVRLIYN------ 174 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG--- 249 E + + + + +R L K ++ Sbjct: 175 ---------SFEEQELIDIVKNVGNNIQKHNVIEISSENRLLNLIDKSIIKKVENSLSET 225 Query: 250 --NVRFYDEQGLCDQLYTHLAQALNRSLFA--IGIDNTLPEEFARLYPRLVRTTRAALAG 305 ++ L H++ A+ R I ++ + E +T Sbjct: 226 IKDINLKISDSAFIGLVVHISLAVQRLRNGETISMEQDVLNELKS--IEQFKTATKIAQQ 283 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLH 337 E E+ + + +E G + + ++ + Sbjct: 284 IEEEFDIKVPIDEIGYITMHLRGSKLRLETKN 315 >UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=Clostridium difficile RepID=Q184K6_CLOD6 Length = 656 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 52/429 (12%), Positives = 145/429 (33%), Gaps = 13/429 (3%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + +R I L + T+ S+ + D++E + +L+ Sbjct: 80 LDNKGSQIPTTREERVIYIYSVLLKSNDYITIQQLSDELYISRGTIERDLAEVEK-LLKN 138 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGF--RLCPSFITSQFTPALKSELKRRGI 119 +++ ++ + ++R ++ + + F A + Sbjct: 139 EGISIYKKPSKGIKLNISERDKRQLTAKFIHKFWSRNWYIKQEQESFYQAFEKIQADVNG 198 Query: 120 ARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 + D + + ++ SR + F + L ++L + + G + + Sbjct: 199 IFSEDDLSIIIDILRNFSRERKFEFSDYEFQSLVIHLAIAVERIRKGEYIEESL--YIGN 256 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK 239 + + + + + +P E ++ L + ++ Sbjct: 257 IENNQMSNTNYLAKQLEEKFSILLPKSEIGYINLHLVASDQHRDNNELKNTSTNPCETST 316 Query: 240 RLVNHFRELGNVRFYD---EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 +++ RE+ Y+ ++ L D L +H+ ++NR + + I N + + Sbjct: 317 NNISNLREIIKNTLYETAYDKDLIDGLTSHVHSSINRLKYGLSIKNPYVNTIKQNFSLSF 376 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL-HEKQIILLTGNDSEREAQI 355 E Y + ++D+E +A+ F A+ + +L ++IL+ + Sbjct: 377 EQALDLKKVIEFIYDIRINDDECAYIALHFEAFRERMKELPQNIRVILVCSTGLGSSRLL 436 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 ++++ + K +SV+ + + A L+I+ + L P I L Sbjct: 437 SARIKKYFPMIKIEKVLSVQELVSSKI--DADLVISTIYLELET--IPTIVVSPILNESD 492 Query: 416 QEQIRKMLE 424 + + ++ Sbjct: 493 IRTLERNIQ 501 >UniRef50_UPI0001694F32 transcriptional antiterminator, BglG family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694F32 Length = 652 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 66/424 (15%), Positives = 140/424 (33%), Gaps = 18/424 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R QILL L T +E G + D+ + R +L+ L L Sbjct: 89 SQEERNTQILLILLNRSDYVTANELAEWLGTSRNTILRDLLKGER-MLQQWNLDLERKQY 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSF-----------ITSQFTPALKSELKRRGIA 120 ++V+G L +RL L + + F I L L G Sbjct: 148 KGFKVKGPELYKRLLLEYLAQNLLDASDMFRMIQGVLRREPIPPDIKKILAPHLLPYGEM 207 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 N + + +L+ + +L +++ L + + Q + + + Sbjct: 208 ENVF--QAVHSLIKMLEEKLNLLLTDQEMIGLLFRFSIAIRRIRDNERIQIEAISVKAIK 265 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDP-LRDAHQRDRQLRQSIK 239 +++ E + P +E +++++ + R P L L + Sbjct: 266 QSASYKIVLEGLTDLGLQMGIKFPEEEAVYVSMQLIVGREELPGLPSTEYGMPDLANVAR 325 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 RL+ + F + L + L +HL+ L ++ + N + ++ R Y L Sbjct: 326 RLIKLVSKKLGYPFEKDPDLFEYLISHLSSKLLKARLGVLDPNPITDQVIRSYGTLFIYV 385 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQL 359 + A S+ + L D + + + F + + + + + G I++ + Sbjct: 386 KEACEEIFSDINLLLVDFDVAYLVIHFQESYERLQQNVKYKALFVCGTGRGTARLIKRLM 445 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 + SV + L+I+ + LP P++ + T + Sbjct: 446 ENRIPQLEVAGYCSVMEVSKLLEQHSVDLVISVLPIELP---VPVVRVNPIPTKDDIIAV 502 Query: 420 RKML 423 L Sbjct: 503 LNCL 506 >UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFS9_9FIRM Length = 643 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 56/428 (13%), Positives = 135/428 (31%), Gaps = 19/428 (4%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 ++ + P + R+ +LL L Q +M + ++ V D++E + + Sbjct: 76 LLSDIRPICSDAPENRKYHVLLKLLQAPSYLSMESIADTLYVSKGTVVNDVNEIIPFVEK 135 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 LT+ RV G R+ + + RL + + ++ P + Sbjct: 136 Q-GLTMEKKAKYGVRVLGKESRIRIAECAVISKLVRLQGNGLLTKLVPFFEE-------- 186 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 D + +++ F + + L + + G + Sbjct: 187 ---TDLQEIHTILHDMEDDYGFTFADSSYAEMMISLAITVERVRNGNVCCPTEGELNGYR 243 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS--I 238 ++ +A + R ++ + E ++ + ++ + + +R + Sbjct: 244 QKNQWSMAGHMARKLEQEFHIVMDEGEQAYITMNLMGAKLQNRPMENKAVISGVRDIQKL 303 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 ++ ++ + +Q L + LY HL NR + +DN + + Sbjct: 304 DEIMKAAGDVFHEDILGDQLLRNTLYMHLEGMFNRLNHQMHLDNPIKQMVKDELAYEFEI 363 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK---QIILLTGNDSEREAQI 355 ++G L D+E +A+ GA + +++ G Sbjct: 364 ATYIAGLIAEQFGTGLGDDEICDIALYLGASFERRKISDVLVAPTVVIACGTGMGTSLFF 423 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 E +L+ + + + V + +I+ + L +I L Sbjct: 424 EARLKRVFPDITIRRVLPVSRIREVLEQETLDCVISTVPLALD--GINVIQVSPVLNDKD 481 Query: 416 QEQIRKML 423 E +RK L Sbjct: 482 IEVLRKAL 489 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 36/330 (10%), Positives = 87/330 (26%), Gaps = 42/330 (12%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R ++L L + T +++ V DI +E L+ + L + Sbjct: 4 REMKLLELLAKDDRVYTTVELAKMLHVSTKTIKKDIKNI-KEELKTPECHLHSQAGKGVW 62 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 + + FI S + R D ++ Sbjct: 63 LTCS----------------DQGNVFIKSLLSDI-----------RPICSDAPENRKYHV 95 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + LQ + + L + ++++ + A+ R Sbjct: 96 LLKLLQAP-SYLSMESIADTLYVSKGTVVNDVNEIIPFVEKQGLTMEKK---AKYGVRVL 151 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + + + E ++ L + + + Q I +++ + F D Sbjct: 152 GKESRIRI--AECAVISKLVRLQGNGLLTKLVPFFEETDLQEIHTILHDMEDDYGFTFAD 209 Query: 256 EQGLCDQLYTHLAQALNRSLFAI---GIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 ++ LA + R + L + E E+ + Sbjct: 210 SS--YAEMMISLAITVERVRNGNVCCPTEGELNGY-RQKNQ--WSMAGHMARKLEQEFHI 264 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHEKQII 342 + + E + + +Q + K +I Sbjct: 265 VMDEGEQAYITMNLMGAKLQNRPMENKAVI 294 >UniRef50_A0AFK2 Complete genome n=18 Tax=Listeria RepID=A0AFK2_LISW6 Length = 644 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 59/416 (14%), Positives = 140/416 (33%), Gaps = 23/416 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + +R + L + ++ S D+ + + I + LTL + Sbjct: 95 NPEERVKYEIFLLLSSADYIKLEDLADTIYASRATISNDMKQVRKVI-ASYDLTLVSKPG 153 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ G R L + + P F K + K + + D Sbjct: 154 SGVKIVGEEEKMRYTLTALI--ASKKAPESYLETFFEWHKQKDKLQKLMSAVTD------ 205 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 RF + L L++ + + G + + L S E +A ++ Sbjct: 206 ----YFFATNIRFTDEALQNLLLHMMILVERIELGHSLEQFELTD---VSEEEIVIANKL 258 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + + + ++ L + R+ + D + I+ ++N + Sbjct: 259 ATILESLFEITISSADKNYLLLQIASKRI-LNVEDKEISEFDDYAYIEGMLNRIESHYSY 317 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 D+ L L H+ L R + + + N + E R YP T A+ + +Y Sbjct: 318 HLQDDLQLKKDLIAHIHSMLYRVKYHMTVKNPMTEHIKRYYPLAYEITLDAVESLKKDYP 377 Query: 312 VHLSDEESGLVAVIFGAWLMQENDL---HEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 ++ E +A+ GA L + + K +++ G+ +E +++ Sbjct: 378 YDINQNELAYLALHIGASLERNYQISYYRHKSALIVCGSGFGTARIVEAKVKSAVSNLDI 437 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 K +S++ + + +I++ +P + P+I T + + + +++ Sbjct: 438 TKVVSIQEYNRFIHIEE-DIILSTVRIP--EKNKPVIKISNIPTNEELKMLGAIIQ 490 Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 33/315 (10%), Positives = 82/315 (26%), Gaps = 38/315 (12%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R + L G + S+ + + DI++ E L H T+T Y Sbjct: 7 KRLETLYGMLLDAGSHLSAQKLSQELHISERTIRTDIAKL-TEFLENHGATITLTRGAGY 65 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 ++E PA + D +L Sbjct: 66 KIE---------------------------ILDPAAFQAFQNEKNKPKNADYFDLDNPEE 98 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 + S D L + + T + Q R + + + + G Sbjct: 99 RVKYEIFLLLSSADYIKLED---LADTIYASRATISNDMKQVRKVIASYDLTLVSKPGSG 155 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN-VRF 253 + + L + + P+ + + + +++L++ + Sbjct: 156 VKI---VGEEEKMRYTLTALIASKKAPESYLETFFEWHKQKDKLQKLMSAVTDYFFATNI 212 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 L H+ + R ++ + + + ES + + Sbjct: 213 RFTDEALQNLLLHMMILVERIELGHSLEQFELTDVSEE---EIVIANKLATILESLFEIT 269 Query: 314 LSDEESGLVAVIFGA 328 +S + + + + Sbjct: 270 ISSADKNYLLLQIAS 284 >UniRef50_A4TMW0 RNA-binding protein n=24 Tax=Yersinia RepID=A4TMW0_YERPP Length = 453 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 166/443 (37%), Positives = 246/443 (55%), Gaps = 21/443 (4%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 P L+ LS QRRC +LL LF P + T S+ NGVD DI+E EI R++ Sbjct: 9 PRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQRFY 68 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPAL------------ 110 L L D Y++ G+ L++RLCL HWLRRG R CP FI F+P L Sbjct: 69 HLELNASADDYYQINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLS 128 Query: 111 ---------KSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLL 161 +S L++ + ++ + L+ +V C L ++ +D FL LYL YC+ Sbjct: 129 SALRRSTLRQSTLRQSTLRQSILRQSTLRQIVYQCEPHLNRQLSEKDRQFLQLYLAYCVW 188 Query: 162 QHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP 221 ++ PQ + Q++W E A + R + P+ E + L+ +M++ Sbjct: 189 ENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLILMLTMIKAH 248 Query: 222 DPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGID 281 D +L +IK+L++ F+ L + F + L QL+ HLA A+ R F IGID Sbjct: 249 HYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGID 308 Query: 282 NTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQI 341 ++LP++ +++YPRL+RTT+ AL FE EY + S EE L+A+ FGAWL+Q N L EKQI Sbjct: 309 HSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQI 368 Query: 342 ILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFS 401 +LLT ++ EAQ+EQQ+RELTLLPL+IK++S +LQ+GAP G A+++ PY + + Sbjct: 369 LLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYLQSGAPAGTAVVLTPYVLQSTESA 428 Query: 402 PPLIYTDLTLTTHQQEQIRKMLE 424 PPLI LT Q Q+ ++LE Sbjct: 429 PPLIQISFPLTEPQSIQLCRILE 451 >UniRef50_B0MET8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MET8_9FIRM Length = 671 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 67/424 (15%), Positives = 134/424 (31%), Gaps = 23/424 (5%) Query: 10 VLSAPQRRCQILLTLFQPG----LTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + +R I+ L E V D+ IL+ H L Sbjct: 103 PSDSEERVHYIISRLLLNSLNSGERIDFFDLEEELFVSTSTLKKDLRTI-DGILKKHDLR 161 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + RV G R C+ ++ + + S + Sbjct: 162 IRDTKKEGMRVAGQETKIRFCISEYIFNSQKDTGDIGNKFYKDMFSS-----------DE 210 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 NL+ ++ R L ++ L + +++ + EF Sbjct: 211 VENLRIILMEAITDFNLRLTDIAFRNLLVHSLIMLKRFEKKRHVKYDEEEIELFSGTKEF 270 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 + AQ+I + + DE ++ L + D + ++ I+ ++N Sbjct: 271 RCAQQIITEISGKLGISLG-DEVYYLTQHLIS--SQRFLIENLDGDYEYKEEIEDILNTI 327 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 R + D+ L + L HL+ AL R F + I N + LYP A Sbjct: 328 RSGTGIDLSDDNQLINGLAMHLSAALQRLRFDMNIRNEFLDSIKNLYPLAFELAVVAGEV 387 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQ---ENDLHEKQIILLTGNDSEREAQIEQQLREL 362 E ++ + + E G +A+ FGA L + K+++L+ ++++L+ Sbjct: 388 IEKKHKLKAKESEIGFLAMHFGAALERKGLNRKQEPKKVVLVCIAGIATALLLKEKLQHK 447 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + I + GA L++ +P S + L L + + Sbjct: 448 FGQYIEIVKSCPVQDVDEELIDGADLVLTTVELP-DFQSEKIKKIKLFLDDDDLNHLATV 506 Query: 423 LESA 426 + + Sbjct: 507 ITDS 510 >UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03XN7_LEUMM Length = 663 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 58/413 (14%), Positives = 140/413 (33%), Gaps = 18/413 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + R+ IL L + +E V S D+S + ++ +++++ + + Sbjct: 93 NISDRQKYILNKLIIENQKFLIDDLAEKLFVTRTTLSKDLSIIRKVLM-PYRISVESKAN 151 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + G ++R + + S +++ +K + + D Sbjct: 152 IGVFITGLERDKRHFILDYFF-----------SHSENSIQHYMKNKSFFKAISFDQITII 200 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 +++ C R I + LY+ + + G Q P+ E VA++I Sbjct: 201 VLDEC-REAGIHLTDFTIQNIVLYIALSVQRLKCGFELQAAPVDIN-PEIRNVSDVARKI 258 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + P E ++ + +++ R L ++ + Sbjct: 259 FSRIESGLALKFPESEVDYLTIQLMAQGKNINIQNDGPLQRDLDM----ILQRIELETDY 314 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 + L + HL + R I + N L +E Y T+ + Sbjct: 315 PVTKDYALKKNIIEHLKPMIVRLEQGIQLKNPLLQEIKTNYLSEFMDTKRYIKWSPYLSR 374 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 ++D+E +A+ A + +L++ + +++ + ++ + + LNI Sbjct: 375 FDINDDEVAYLALHLMAAAEKYKNLNKPRALIICATGYGSAQLLNNRVEKEFGMYLNIVD 434 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + + LII+ + +F P+I + LT ++I + L+ Sbjct: 435 IKGYYEVDDTTLSNVNLIISAIDLSTRVFKVPVIQVSIFLTEADVQKINEFLD 487 >UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZM9_9CLOT Length = 697 Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 55/426 (12%), Positives = 148/426 (34%), Gaps = 16/426 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + +R +++L L + + ++ + GV + S D+ E + +L+L Sbjct: 91 NKDERIKKLILELLKESEPQKLFYYANMLGVSEATVSNDLDEVAK-WFDKFKLSLVRKQG 149 Query: 72 GSYRVEGTVLNQRLCLFHWLRRG-----FRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 +EG R L ++ + E K + D Sbjct: 150 FGIYLEGKEKAYRKALTAFIDEYTSSYKLTQNDKNTMRESNLIKLIENKSSKNIYSLLDT 209 Query: 127 TNLQALVNLCSRRLQKR---FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 ++ +++ ++ L +++ + + + + E Sbjct: 210 DIMKRVISCLINLNNEQIANLTDSSYAGLVIHITIAINRIMHNEIIEPDSRLDEDIEHDR 269 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDP-LRDAHQRDRQLRQSIKRLV 242 ++ +A I ++ +P E ++ L ++ + + +R+ L + ++ Sbjct: 270 DYSLAVIIASSLEKEFDIEIPEIEVTYICLHIRASKMQNTSNSKSSKRNNTLVSLVYEMI 329 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + + + D L H+ L R + I N L ++ YP + + + Sbjct: 330 EAYDPDISYILEQDDAFIDGLIAHMQPTLVRLTNGLAIRNPLLDQIKSDYPDIFKKCKKV 389 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ----IILLTGNDSEREAQIEQQ 358 A E + + + + E+G +AV FGA +++ + + + ++ + I+ + Sbjct: 390 TAMLEEKLNLKVPESETGFLAVHFGAAVVRLEQNNLSKRTVYVGVVCASGIGISRFIKTK 449 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 L ++ ++I+ L + R ++ M +P +I+ + +T + Sbjct: 450 LEKVFGNRISIETYGKGD-LDSNTIRKTDFFVSNINMEVPD-GADIIFINPLITDSDIKN 507 Query: 419 IRKMLE 424 I + Sbjct: 508 IDANIR 513 Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 90/323 (27%), Gaps = 17/323 (5%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R QI L L ++ ++ GV ++ L+ + L+ + Sbjct: 8 RLGQITLNLLMQDSPVSVKYLADSVGVSKRTVQRELEYIESS-LKKYNLSFQSKAGTGVW 66 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +EG ++ L L L S + + LK + FY L Sbjct: 67 IEGDKSDKEK-LTALLMADDTLDVSNKDERIKKLILELLKESEPQKLFYYANMLGVSEAT 125 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 S L + + D L L G ++ + ++ F + Sbjct: 126 VSNDLDEVAKWFDKFKLSLV-------RKQGFGIYLEGKEKAYRKALTAF------IDEY 172 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + + L ++ D + + + + + D Sbjct: 173 TSSYKLTQNDKNTMRESNLIKLIENKSSKNIYSLLDTDIMKRVISCLINLNNEQIANLTD 232 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 L H+ A+NR + I+ + + R + E E+ + + Sbjct: 233 SS--YAGLVIHITIAINRIMHNEIIEPDSRLDEDIEHDRDYSLAVIIASSLEKEFDIEIP 290 Query: 316 DEESGLVAVIFGAWLMQENDLHE 338 + E + + A MQ + Sbjct: 291 EIEVTYICLHIRASKMQNTSNSK 313 >UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9W1_9FIRM Length = 515 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 71/427 (16%), Positives = 137/427 (32%), Gaps = 10/427 (2%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 M A S R+ I + L + + V D+ +L Sbjct: 78 MQQKNAQSIDYSPQFRKIYIGMRLILCPQNCRIYELANELYVSRATIHKDLLALAP-MLE 136 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLR--RGFRLCPSFITSQFTPALKSELKRRG 118 +++TL + VEG N R L + G++ + I P + Sbjct: 137 TYKITLHRKNNNGLSVEGKERNYRAMLLELMNHDNGYQKFTAMIKDPDFPCTGDFVFPAL 196 Query: 119 IARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + LQ L + + L L L+L C ++ G + Sbjct: 197 DYIDDEIKEFLQVLKHSENSYLHTLLCPSLFQVL-LHLFICFIRVREGHYVSLSDPFIEE 255 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 +S ++ +++ + + E ++ + L+ Q + R+ Sbjct: 256 LKSKPFYEETKKLIQALEEYYHISFSETEIRYLQVFLISLQSSSDTAKDEQEEA--RELS 313 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 L+ + + N F+++ L LY HL A+ R I I+N L E LY Sbjct: 314 DLLIAEWEKHLNYSFHEDTELKSALYAHLCPAITRFRHGISIENPLMYEIKTLYKNTFSI 373 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQ 358 +A+ Y +SDEE G A+ L + + +L+ + S ++++ Sbjct: 374 AKASAHILTERYQAPISDEEIGYFALHLAMALERAK--KPLRTVLICHDSSSATKLLKRK 431 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 L + S LI++ + L P I + L Sbjct: 432 LMTQFPELDIVAVQSYLTV-HDFPFHEIDLILSTMELNLDN-DIPFIVINPLLYDCDIAH 489 Query: 419 IRKMLES 425 ++ ++ S Sbjct: 490 LKTIITS 496 >UniRef50_UPI0001C425D1 mannitol operon transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C425D1 Length = 689 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 64/419 (15%), Positives = 146/419 (34%), Gaps = 20/419 (4%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 +A +R+ IL+ LF + + + D+ ++ + ++L + Sbjct: 85 QYEYTAHERQKLILILLFTSHEPIYVKDLITVTKASRNSCLNDLKAI-KQQSKQYRLEIN 143 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 Y + G R + + F+ L S K + + Sbjct: 144 YERSSGYYIHGPEFELRKWFVNAF-------TFQKDNDFSTELMSLWKEANPSLLETVEH 196 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 N+Q L+ + L + I L ++ + L + G +++ E+ ++ Sbjct: 197 NVQ-LLQVLQNDLDVQLNPESIEELTWHIAFFLERMKLGEYVFLTKDEKQALENNRAYKG 255 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A+ + + VP DE ++ + LR + L ++++V F+ Sbjct: 256 AELLSQELFNSNQLSVPEDEIYYLTIFLLSLRSLSDSPMSTVN--GLEDVVRKMVIDFQR 313 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 + F + + + L H+ A R + I N L + Y + T+ L E Sbjct: 314 YACIEFEHFRAVEENLLIHIRPAFYRLKYGISAKNPLTKSIKEKYGDVFELTKKVLPHLE 373 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLRELTLL 365 G ++D+E+ + + FG W+ +E K +++ + ++ QL L Sbjct: 374 RFVGAAINDDEAAYITMHFGGWMRKEGSQPAARKHALIVCSSGIGTSQILKSQLETLFST 433 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 S++ + A LI ++ + P + + L ++E++ + Sbjct: 434 LDFEVVTSIEE-----SKTKADLIFTTVSLQKQML--PTFHVNAILNDVEKERLLTNVN 485 Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 23/300 (7%), Positives = 79/300 (26%), Gaps = 39/300 (13%) Query: 28 GLTATMATFSELNGVDDDIASLDISETGREILRYHQL-TLTTGYDGSYRVEGTVLNQRLC 86 ++ S+ V ++ + + L+ ++L + + + + Sbjct: 18 EAPVSILELSKSLRVSRRTIYYNLEKV-NDWLKDNKLDQVQQVKSVGIFITTSTKKK--- 73 Query: 87 LFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFES 146 + +L + + + ++ ++ L+ + Sbjct: 74 ----IPELLKLNSDIQYEYTAHERQKLILI--LLFTSHEPIYVKDLITVTKASRNSCLND 127 Query: 147 RDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPD 206 L+ Q + EF++ + + + + Sbjct: 128 ---------LKAIKQQSKQYRLEINYERSSGYYIHGPEFELRKWFVNAFTFQKDNDFSTE 178 Query: 207 EPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTH 266 L+ L + + + QL Q ++ ++ ++L H Sbjct: 179 ------LMSLWKEANPSLLETVEHNVQLLQVLQN---------DLDVQLNPESIEELTWH 223 Query: 267 LAQALNRSLFAIGIDNTLPEEFAR--LYPRLVRTTRAALAGFESEYGVHLSDEESGLVAV 324 +A L R + L ++ + R + + + + ++E + + Sbjct: 224 IAFFLERMKLGEYV--FLTKDEKQALENNRAYKGAELLSQELFNSNQLSVPEDEIYYLTI 281 >UniRef50_C4V215 N(Pi)-phosphohistidine--sugar phosphotransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V215_9FIRM Length = 630 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 117/395 (29%), Gaps = 26/395 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 ++ R +I+ TLF E + D+ R +L + L+L Sbjct: 86 TSEVRIGKIIRTLFYSSAPCKSDNLCEALHISRSTLKKDLRGV-RALLGMYDLSLVHQPY 144 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + G + R CL RR + + Sbjct: 145 AGLSIRGAEKDIRRCLVRMKRRILAGDGGILHQEVQQTG--------------------R 184 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ ++ R + L++ + + G + + + +++ + Sbjct: 185 VLQEIFKQYDCRMAAYSFQDFVLHIDVSIERMRQGHEI-RDEALPSLPAAPQDEALSRAV 243 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + + E ++ LL +V + A + + ++ + Sbjct: 244 VVAMETQYRMRFSAGECRYILLLLMSRKVLS-WKQASTAAADVYAVVMEMLAAVQRTFCY 302 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 F + L L THL R L + +N + E P A S YG Sbjct: 303 DFSHDFELIASLSTHLIPLRTRLLCGMQQENPVGREIREGGPLAYEMANVACGILRSAYG 362 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT-LLPLNIK 370 S +E+G +A+ F L + K+++++ G + + E I Sbjct: 363 CEASADETGYIALYFHVALERMRAQRRKRVLIVCGAGKGAAMLLAHTIEENYGKYLEVIG 422 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLI 405 F T + A I++ + P+I Sbjct: 423 TYEAADFSDTD-LQAADYILSTIPLR-ETLPVPVI 455 Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 83/311 (26%), Gaps = 46/311 (14%) Query: 19 QILLTLFQ-PGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVE 77 + L L T SE G+ DI+ E++ H L ++ Sbjct: 4 WLQLMLLMPEDEFITYKALSEELGISVRTVYDDITRL-NEMMLEHGAQLVARTHHGVTLD 62 Query: 78 GTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCS 137 H R + + SE++ I R + + NLC Sbjct: 63 ----------VHDRARFLHFLDALGSGDTILGDTSEVRIGKIIRTLFYSSAPCKSDNLCE 112 Query: 138 RRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQR 197 L++ ++ ++ Q Sbjct: 113 ---------------ALHISRS--------------TLKKDLRGVRALLGMYDLSLVHQP 143 Query: 198 RALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQ 257 A + E + ++ D ++++Q R++ + + R Sbjct: 144 YAGLSIRGAEKD-IRRCLVRMKRRILAGDGGILHQEVQQ-TGRVLQEIFKQYDCRMAAYS 201 Query: 258 GLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDE 317 H+ ++ R I + P+ +RA + E++Y + S Sbjct: 202 --FQDFVLHIDVSIERMRQGHEIRDEALPSLPAA-PQDEALSRAVVVAMETQYRMRFSAG 258 Query: 318 ESGLVAVIFGA 328 E + ++ + Sbjct: 259 ECRYILLLLMS 269 >UniRef50_C7TG26 PTS system, IIAB component n=2 Tax=Lactobacillus rhamnosus RepID=C7TG26_LACRL Length = 644 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 63/419 (15%), Positives = 134/419 (31%), Gaps = 30/419 (7%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S R +++ L T++ ++ V D ++I +Q+T+ T Sbjct: 84 SQSARVHYLMIKLLLTTRPCTLSKLADDLFVSRRTIDNDFK-VVKQIFAQNQVTVHTSR- 141 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN--L 129 +V + N+R L LR+ + + ++ + T + Sbjct: 142 RGIQVTASEANRRHMLAKLLRQYWGESLYIAKQKDGEVVQQIQLPHYLNHLVNPATTKAV 201 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++ F + L ++L + Q + Sbjct: 202 MQSLTEFLKQSSLIFSDYALQSLAIHLIIACERPKK--------EQPTAIHLTPMLPETK 253 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPL-----RDAHQRDRQLRQSIKRLVNH 244 ++ + Q + + + L Q +LR+ I + Sbjct: 254 QLLALVSKYVHQTLDAANAQQINAHIAALVDRQVSGAPAASIEDQTTPELRRQIASWLTQ 313 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 ++ L + L HL+ AL R + I N EE R +P Sbjct: 314 IS--------PDKRLLEDLSVHLSGALVRVAHGMSIPNPYTEEIKRNFPMAFDAAAQLSM 365 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 Y V L+D+ESG +A+ F ++ ++ +++ + + Q+L E Sbjct: 366 TVAKHYHVQLNDDESGFLALHFESFFERQQVADRISTVVVCSSGVGTSRLLAQRLEERFR 425 Query: 365 LPLNIK-HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 L I + + ++ P LII+ P+ P++ + L H E++ + Sbjct: 426 EKLVITRTIGLAELMRHAIPES--LIISTV--PIQGMRQPVVTVNPLLLQHDVEKVSQQ 480 >UniRef50_B0P1K3 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1K3_9CLOT Length = 694 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 76/420 (18%), Positives = 146/420 (34%), Gaps = 13/420 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 V S R+ ILL L F+ L + D S D+ E L ++ LTL Sbjct: 92 PVYSKADRQMIILLELLTINEPLKYFYFTSLFHISDATLSNDLEEVET-WLDHYNLTLYR 150 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 EG + R + LR+ R + LK + D Sbjct: 151 RPGMGIYWEGKEEDYRQAVTMVLRQKLRGHSLKVLFDKEKKLKERMFPNLTQEVLDDT-- 208 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 + ++ L + I L LYL + G + + E+Q+A Sbjct: 209 -RDIIKNMQGVLDIEYTDHSIRHLSLYLLITQNRVRTGHEIKE-EKDVKSITHLPEYQIA 266 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH--QRDRQLRQSIKRLVNHFR 246 + +G + E +A+ ++ + + ++RQ + R++ Sbjct: 267 KWLGGKLSNFERHQLSQGEVYNIAMQLLAAKIWKNKSENKIDEESFKVRQLVMRIIAEME 326 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 L + F++ L D L H+ A+NR + +N + Y ++ T A Sbjct: 327 ILLEMEFFENAVLIDGLCNHMKPAINRMKQGVFTENQYIDFLEEKYSKVYVATIKACEFL 386 Query: 307 ESEYGV-HLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTL 364 + E + L + E G +A+ F + Q+ D EK + + + + L++ Sbjct: 387 KEELHIKKLPEGEMGFIALYFCVAVEQQKDKEEKLSVYVACPHGVGTSHMLAVHLKKEFP 446 Query: 365 LPLNIKHMSV-KAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + K +S + + G I++ + L + +Y + LT ++ I M+ Sbjct: 447 QLMVQKIISTAEIKEEELIEEGIDFIVSTAKLNLTFPN---VYVNSILTETDKKMINAMI 503 Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 87/329 (26%), Gaps = 34/329 (10%) Query: 15 QRRCQILLTL--FQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 +R+ I+ L F T+ SE + ++ E + L Sbjct: 9 KRQKLIIEMLAAFNADDPITIQAISEKLKLSSRTVLREMPRI-NEWFEENDFKLVKKPRI 67 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 V+ R + + + L L + FY + Sbjct: 68 GMYVDEDAET-RNYIKELVDMDENKPVYSKADRQMIILLELLTINEPLKYFYFTSLFHIS 126 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 S L++ D + L LY + GI W +++ A + Sbjct: 127 DATLSNDLEEVETWLDHYNLTLY-----RRPGMGIY---------WEGKEEDYRQAVTMV 172 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + R + R +++ + ++ + + + ++ Sbjct: 173 LRQKLRGHS----------LKVLFDKEKKLKERMFPNLTQEVLDDTRDIIKNMQGVLDIE 222 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFAR-LYPRLVRTTRAALAGFESEYG 311 + D L +L NR I ++ + + + + Sbjct: 223 YTDHS--IRHLSLYLLITQNRVRTGHEIKEE--KDVKSITHLPEYQIAKWLGGKLSNFER 278 Query: 312 VHLSDEESGLVAVIFGAW-LMQENDLHEK 339 LS E +A+ A + + ++ Sbjct: 279 HQLSQGEVYNIAMQLLAAKIWKNKSENKI 307 >UniRef50_B0MFP8 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFP8_9FIRM Length = 692 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 65/421 (15%), Positives = 145/421 (34%), Gaps = 26/421 (6%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 V S +R I L L ++ F+ + + +D+ + E L + L + Sbjct: 83 STYVYSDKERGALIFLILLCAREELSIYHFTSKLDISKNTFLIDVKKLE-ERLAPYGLGI 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 Y + G+ +R + +R+ + + EL Sbjct: 142 HYSRQDGYHLAGSEFCKREAMIPIVRQILNMPNGQEAILEISQVDPELM----------- 190 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 ++ ++ +L+ RF + L L L++ G + P + E+ Sbjct: 191 EQVRGQISEIENKLKIRFTDERLRELPYILCLVLIRIKKGRILEDLPESFQHIAGTKEYS 250 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 V E + E +F A + D + + ++ ++ ++++++F Sbjct: 251 VMVEFAKEHDVAW-----QTEKIFFAAQIQISNYHRFQSDNLRSEVEIMEAARQVIDNFE 305 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 ++ V + L + L+ H+ A R + I+ ++ + Y L + ++ Sbjct: 306 KIICVNIKERDILLEALFQHVKPAFYRVKYHYHIEQSIVDMVLPRYSSLHAMVKRSMKPL 365 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQEN----DLHEKQIILLTGNDSEREAQIEQQLREL 362 E G DEE + +FGAWL +E + +K+ +++ N + LREL Sbjct: 366 EELAGSEFPDEELVYITALFGAWLQREGILDIENQKKRAVIVCANGVSVSNFLFFTLREL 425 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + +S++ F T L+ + L + + R+ Sbjct: 426 FPEIEFLTCLSMRDF--TEYKEEFELVFTMVRLETDKLQ---FLVKPFLDEASKHKFREK 480 Query: 423 L 423 + Sbjct: 481 V 481 >UniRef50_B0P5V1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5V1_9FIRM Length = 671 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 70/425 (16%), Positives = 134/425 (31%), Gaps = 14/425 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +RR I + + V + D+ E LR QL++ + Sbjct: 89 LSPEERRESIYYHMLFSETAIKAEDLASFLRVSTPTVTNDLHSLREE-LRVRQLSIASKK 147 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPAL-----KSELKRRGIARNFYD 125 YR+ G R CL L + + T + + E R +A ++ Sbjct: 148 GEGYRLRGCEEEFRACLVEALIQLTNDSHAITRYSLTNRVVRGVCREEHTLRSLALDYLA 207 Query: 126 DTNLQALVNLCSRRLQKRFE---SRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 +L AL L + + L LYL + + G Sbjct: 208 AVDLDALAGLLDYAREITYHTMPEDGYIRLLLYLAVLVRRACGGNCFSGEKPSGN-QGEP 266 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 E Q+A + + R + E ++ + P + + +L + +++ Sbjct: 267 REEQLASLLIDRLKTRFHLDLGSGEAAHLSKWLISCNIRFPPKTNDKLAERLSSIVDKML 326 Query: 243 NHFRELGNVRFYD--EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 + D L L HL + + I N L + YP + Sbjct: 327 EVLHSYPSYDMPDFYRDKLKMNLMNHLKLTVKKYQLQIPSPNPLLAQMKVNYPEIFAVAH 386 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 FE G+ L ++E G +A+ A + + N L K+ +++ ++ ++R Sbjct: 387 QMSQVFEMGTGIPLDEDEIGFIAIHIAANVEECNRLRSKKALIVCNTGQGAAIVLQNRIR 446 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 +S T II+ MP P+ ++ + ++I Sbjct: 447 NNIPRLEIQGTLSALDVGNTDVLAEVDFIISTVKMP--PLDKPVFQVSPIISAAEIDRIN 504 Query: 421 KMLES 425 + L Sbjct: 505 RYLNG 509 Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 13/128 (10%), Positives = 37/128 (28%) Query: 89 HWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRD 148 R F S+ L + + + + + + R + + Sbjct: 544 ECFLRELESIAPFTDSEAIQPLGEMTEENIMFQCSMTLARISSALMELGRDCGIQLSNDK 603 Query: 149 IHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEP 208 + + +++ + GI+ + ++ E+ ++ R +P E Sbjct: 604 LFGMIIHILMSFPRWRKGISDREYASEQYKNENIYVYEYLVRQLREISTEYGLHIPDKEA 663 Query: 209 LFMALLFS 216 L + F Sbjct: 664 LALMRYFI 671 Score = 42.5 bits (99), Expect = 0.032, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 54/164 (32%), Gaps = 9/164 (5%) Query: 160 LLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLR 219 + ++ G + + ++ A+ R+ + + + E +A F+ Sbjct: 503 INRYLNGRLSTPRIHENDAGQESFQYSFAELADRYVRPKERECFL-RELESIA-PFTDSE 560 Query: 220 VPDPLRDAHQRDRQLR-----QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRS 274 PL + + + + I + ++ +++ + H+ + R Sbjct: 561 AIQPLGEMTEENIMFQCSMTLARISSALMELGRDCGIQLSNDKLF--GMIIHILMSFPRW 618 Query: 275 LFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEE 318 I E++ + L +EYG+H+ D+E Sbjct: 619 RKGISDREYASEQYKNENIYVYEYLVRQLREISTEYGLHIPDKE 662 >UniRef50_A6CNR6 MtlR n=2 Tax=Bacillus RepID=A6CNR6_9BACI Length = 695 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 62/419 (14%), Positives = 148/419 (35%), Gaps = 14/419 (3%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 P+ + +R+ +L+TL G + G+ ++ + E + L + LT Sbjct: 84 PTDETPEERKLSLLVTLLHEGPYFKKQVLANHLGISPATLTVYLDEL-TDWLSKFSVLLT 142 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 V ++R L ++ I K + F + Sbjct: 143 RKRGVGVEVSADEASKRHALANFF---LVYFYEEIIESLYLLQKGTHLNEPVLGYFSPEN 199 Query: 128 NL--QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 L VN + Q + D L +Y+ + + + + + + E+ Sbjct: 200 MLAVDQTVNRIFHQEQTKLTDSDYIGLVVYICLSIQRTGSNLLLEEPAVSPSD--YSAEY 257 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 ++ + IG R + + +++++ +V + L Q IK+++ Sbjct: 258 RLVERIGAELDHRISTSLMKSDIHYLSVILKGSKVQAADSIDYDSII-LGQLIKKVIEDV 316 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 +V D+ L L H+ ++ R + + N L ++ + YP L R +L Sbjct: 317 STKLHVDLSDDFSLYQGLLAHMEPSIFRLKQKMELFNPLTDDIKKKYPVLFMAVRDSLE- 375 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 +H ++E V + FG+ L+ + + +++ + ++++ Sbjct: 376 -NEFKDIHFPEDEVAFVVLHFGSALLMHEEKVKINAVVVCPTGIGTSKMLASRIQKEITE 434 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 +++ +S+K F Q+ + + ++I+ +P L+ IR L+ Sbjct: 435 INSVEILSLKDF-QSASLKEYDIVISTVRLP--FTDIDYTLVSPLLSDKDIGSIRNYLQ 490 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 33/314 (10%), Positives = 80/314 (25%), Gaps = 29/314 (9%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R I+ + + T++T ++ V ++ + IL +QL L + Sbjct: 6 REKSIIDLIIRTSGKHTVSTLADYLNVSGRTIQRNLKSVEK-ILEEYQLKLKRTTNEGLF 64 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 ++G L L + + + L + L + +L Sbjct: 65 IDGRNDQIYK-LIQKLTDAVPTDETPEERKLS-LLVTLLHEGPYFKKQVLANHLGISPAT 122 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + L F L + G+ + + + + F + Sbjct: 123 LTVYLD-ELTDWLSKF-----SVLLTR-KRGVGVEVSADEASKRHALANFFLVYFYEEII 175 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + +L + ++ + VN + D Sbjct: 176 E---------------SLYLLQKGTHLNEPVLGYFSPENMLAVDQTVNRIFHQEQTKLTD 220 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 L ++ ++ R+ + ++ Y R A + L Sbjct: 221 SD--YIGLVVYICLSIQRTGSNLLLEEPAVS--PSDYSAEYRLVERIGAELDHRISTSLM 276 Query: 316 DEESGLVAVIFGAW 329 + ++VI Sbjct: 277 KSDIHYLSVILKGS 290 >UniRef50_Q899A8 Transcriptional regulatory protein n=3 Tax=Clostridium RepID=Q899A8_CLOTE Length = 650 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 64/414 (15%), Positives = 151/414 (36%), Gaps = 13/414 (3%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 + + +++L L + + T+ S GV S + E LR + L + Sbjct: 38 ENKYRLILYLLKSHYSRTLQEISNFLGVSRSTTSKYLDEIEG-YLREKGVQLVRRRNKGI 96 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + G L +R ++ + + I P +L + L++ Sbjct: 97 YIVGRELQKRRIIYDIILHSYDYSR--IHGLLQPETIYDLMIWNYFYGIDIKHIWELLID 154 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 + + + + + + + + + E+ A+ Sbjct: 155 TL-KAINISVSDMAFYNIIINTCIMIKRIQQDFIADIEYEKMDYISETFEYDEAKNYCNE 213 Query: 195 WQRRALQPVPPDEPLFMALLFSMLR----VPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 +R +P E +++++ F + D + + +L SI+++V+ F + + Sbjct: 214 LSKRYNIIIPKTEIIWISMHFLGANPIKFLEDDIFSNIKERHKLVNSIEKMVSQFEKEVD 273 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + ++ + + L+ HL A+NR+ ++I I N+ E+ Y T + +E+ Sbjct: 274 IALENKDEIINGLFVHLMPAINRAKYSIKIKNSYKEDIKNSYNEFYTITANLVRIINNEF 333 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 V L +E V + F A + + N + +K+II++ + +LR Sbjct: 334 NVELGSDEISYVCLHFVAAIEKMNKSYATKKRIIVVCSTGVGTSKLLANKLRNSYDDIEI 393 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 I +S F+ + T+ L + P+I + + ++Q+ K+ Sbjct: 394 IDILSYNQFISRNT---FDIDYVISTVALKEANVPVIVVNPLINDEDKKQLSKI 444 >UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1J6_ERYRH Length = 641 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 60/417 (14%), Positives = 134/417 (32%), Gaps = 25/417 (5%) Query: 16 RRCQILLTLF---QPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 R I+ + G T+ ++ + D+ R ILR + + L Y Sbjct: 95 RVEWIIRKIANGTLNGTYFTLEALADNLFISLSTLKRDLVSVRR-ILREYHIFLENDYKR 153 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 + G + R + +L R I +N ++ + Sbjct: 154 GLVLTGDENSIRRLINDYLVLEKSTIDIN---------------RIIGQNTPRMDIIERI 198 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 + C ++ Q L ++++ L + G + + A+ + Sbjct: 199 IVTCIQKYQLHLTDIGFKNLSIHIEIALTRIEQGK-LGLSNTTTSINTDSNAYLCAEALA 257 Query: 193 RHWQRRALQPVPPDEPLFMALLFSM-LRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + +P E + + + S ++ + + + Q + ++ + Sbjct: 258 VMLEEALTLKIPESEIINIYIHLSSQKKLHTDVDNINSESPHNLQILNEALDDIYRIYGS 317 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 F ++ L L THL AL R + I N L +E + YP ++ + F Sbjct: 318 DFRHDEILKQGLMTHLESALKRIELGLSIRNELLDEIEKNYPFEIQIAKVLAFHFLKTNA 377 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHE---KQIILLTGNDSEREAQIEQQLRELTLLPLN 368 + + +E G +A+ F + + + I++ ++ +L L Sbjct: 378 IAFNLDEVGFLALHFCGARERARQDEKSETTRAIVVCTTGVGTAMLLKAKLESQFGDALE 437 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 IK +S L L+I+ + L P + +T I++ ++ Sbjct: 438 IKKVSALYQLDKHDMDDVDLLISTVHIDRNL-GVPTVVVSAIVTDRDIAHIKRYIKG 493 >UniRef50_C6JIT2 Predicted protein n=2 Tax=Fusobacterium RepID=C6JIT2_FUSVA Length = 676 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 58/423 (13%), Positives = 138/423 (32%), Gaps = 17/423 (4%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + S +R ILL + SE + + + + +L Sbjct: 74 LNDSRQDYIFSPKEREIYILLKICFERE-INQNVISEELDTSRSTIKVHLRDIKK-VLDE 131 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 + L L + V G R C + + SF+ + L+ Sbjct: 132 YNLELELLHKKGLGVSGEEEKIRQCTLKIMSMVKKSNSSFLKNILDDYLEE--------- 182 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + ++ +N C + + K + YL + + G + + ++ Sbjct: 183 --IEIEGVKLFINYCQKLMNKIVSDEAFDIISKYLILAIYFNKKGYKIT-SIKNYNFLKN 239 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 EF+ ++ + + +E L + F + ++ ++ +K Sbjct: 240 TSEFECVEKSRALLEGFYEIELSEEEYLKITDYFLGSHTYNISYSYYENWVEIEMIVKNF 299 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 +N E +V ++ L L H+ + R I ++NT+ EE YP L + Sbjct: 300 INRINEKLDVDISADETLMTGLVNHIKPTIYRLKNGIELENTIYEEVVESYPNLFSMIKG 359 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQL 359 ++ E +++E + + F A + + + +++++ G+ + QQL Sbjct: 360 SVGELEDFIDNKFTNDEIAFITIHFKAAIDRNIKKKREKVKVLVVCGSGYGSSKLLAQQL 419 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 +++ I + + LI+ + +I + LT ++ Sbjct: 420 KDMYR-VEIIDTIPRYLLEKVNKRTDIDLILTTIPLDDFDTDKTIIKVNPILTKEDMAKL 478 Query: 420 RKM 422 Sbjct: 479 DNY 481 >UniRef50_B0MAW6 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAW6_9FIRM Length = 688 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 60/423 (14%), Positives = 131/423 (30%), Gaps = 14/423 (3%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 LS +R + + L T+ E GV + D+ E + + + +TL Sbjct: 84 YTYYLSKKERSTILAMILLNASGYVTVDQLKEKIGVSRNTLLQDLQEL-KIWFKENGMTL 142 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + Y +E + L+ R + L + LK + Sbjct: 143 VSQVRRGYIIEASELDVRKGILKLLEVNGDDNYYKNGYDLSVFWNLLLKEADSLEIY--- 199 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQH-HAGITPQFNPLQRRWAESCLEF 185 ++ + Q F L + P + + + + ++ Sbjct: 200 EKMKNCILEEEEETQIFFADYSFFEAVTELTIVANRIVRKHFLPGYFTNEWNYLKEGSKY 259 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 ++ + V E L+ + +LR I + Sbjct: 260 TFSKGLFGKISDMFQMDVREVEILYYTECLNGKSYLKDDAQKT-NALELRVMIAETIYQI 318 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + FY + L D L H+ A++R + + N L + + YP + + + L Sbjct: 319 SSCFGIDFYLDFTLYDLLVAHMRSAVHRLKNSEVLVNPLKDTLMQDYPEIFESVKQHLGS 378 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQEN----DLHEKQIILLTGNDSEREAQIEQQLRE 361 E G S++E + + F + + +E + ++ L+ + +L+ Sbjct: 379 LEDYVGQKFSEDEMSFMVLYFASVMEKEKAETEKSRKVKVALVCATGRGTAQFMMAKLKT 438 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYT-DLTLTTHQQEQIR 420 L + + S + G +II+ +PL + P + L I+ Sbjct: 439 LDDMIEIVSISSFHNMREIEK-NGTQMIIST--IPLDDVNIPYVEVRSPMLEKDDILDIQ 495 Query: 421 KML 423 + + Sbjct: 496 RKV 498 >UniRef50_Q8NYI2 MW0220 protein n=49 Tax=Staphylococcus aureus RepID=Q8NYI2_STAAW Length = 698 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 73/415 (17%), Positives = 147/415 (35%), Gaps = 24/415 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S RR ++L LF ++ FS V + DI+ +E L H L+L Sbjct: 88 FSIETRRYYLMLMLFSKENAMSLNHFSIDLQVSKNTVIHDINHV-KEQLENHGLSLKYSR 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G R + + + L D + Sbjct: 147 KHGYEIVGDEFEVRRFFIKLIDQRLNHDITKSEVLKALNL-----------TLEDIAYQK 195 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + + L+ RF + + L L + +G + ++ E+Q A E Sbjct: 196 DKIKQVEQFLKSRFIDKSLSSLPYVLCVIRRRIQSGHVMNPLNINYQYLRDTKEYQ-ATE 254 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I + +P E L++ L V L +I ++++HF ++ Sbjct: 255 IMTQLE----PDLPEAEKLYLTLHLLSTSVQWTDLQESDNISNLTMAIAQMIHHFEQITF 310 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + D++ L QL HL A R + + + L Y L + + + Sbjct: 311 INIEDKEKLSQQLLLHLTPAFYRIKYNLTDRDELINPLQGNYQSLFHMVKQSCQSLTEYF 370 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 G L D E + ++FG L ++++ + + I++ + + +LR L + Sbjct: 371 GKSLPDNEIAYLTMLFGGSLRRQDENFDGKIKAIIVCTQGTSVSQMMLYELRNLFPEIIF 430 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S++ F ++ +P + L L T + L+ ++Q ++RK + Sbjct: 431 LDAISLRTFENYTL--DYDIVFSPMFV---LTHKKLFITKVALSENEQRKLRKEV 480 >UniRef50_C5J5A2 PRD activator n=16 Tax=Enterobacteriaceae RepID=C5J5A2_ECOLX Length = 517 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 68/419 (16%), Positives = 145/419 (34%), Gaps = 23/419 (5%) Query: 16 RRCQILLTLFQPG-LTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 RR +I L +++ SE + D+ L L+L Sbjct: 96 RRVKIASQLLSETPNETSISKLSERYFISGASIVNDL-RVIESWLAPLGLSLIRSPS-GT 153 Query: 75 RVEGTVLNQRLC---LFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 +EG+ R L + + + + K+ + G + + L Sbjct: 154 HIEGSEGQVRQAMALLINGIINHNEPQGVVYSRLDPGSYKALVHYFGEEEVLFVQSLLLD 213 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + N S L + + + ++ + ++ G + F VA ++ Sbjct: 214 MENELSWSLGEPY----YVNIFTHILIMMYRNTHGNALS-REEDQTRQYDENIFNVASQM 268 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDA------HQRDRQLRQSIKRLVNHF 245 ++R +P DE F+ V + Q + R RL+ F Sbjct: 269 IHKIEQRIAHTLPDDEVWFIYQYIISSGVAIDGQKDVSIISHMQASNEARLITWRLITVF 328 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 ++ + F ++ L D L H+ +NR + I I N L E+ + R T+ + Sbjct: 329 SDIVDCDFSEDSALYDGLLVHIKPLINRLNYRIHIRNPLLEDIKAELADVWRLTQYVVNQ 388 Query: 306 FESEYGVH-LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 +G + +S++E G + V F A + ++ + K+++L+ ++ ++ Sbjct: 389 VFKTWGENAVSEDEVGYLTVHFQAAMERQ--IARKRVLLVCSTGIGTSHLLKSRILRAFP 446 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +S Q P LII+ +P + P+ Y +++ +M+ Sbjct: 447 EWTIVDVISAANLSQV-LPDNIELIISTINLPT--VTMPVAYVTAFFNDADIKRVTEMV 502 >UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLB5_CLODC Length = 712 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 52/423 (12%), Positives = 143/423 (33%), Gaps = 17/423 (4%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL L F+++ V + + + D + L + L Sbjct: 102 RNLIILSKLLVSNEPVKSYYFAKILKVSEGVLNNDF-ALASKWLERFDIELVRKPGLGVY 160 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSF-ITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 ++G N R + + F + + ++++ ++ N + + ++ Sbjct: 161 LKGQEKNFREAYVNLIYDSFNEKEILDMVRNISENIQTDKAIEILSENRLLNLMDRCIIR 220 Query: 135 LCSRRLQKRFES-------RDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 L K+ L +++ L + G + + EF++ Sbjct: 221 KVEATLTKKLSDLDVNLADSAYIGLVVHISLALQRIKNGENITMDKEFLKELSITEEFKL 280 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSML--RVPDPLRDAHQRDRQLRQSIKRLVNHF 245 A+EI + + +P DE ++ + R + + D ++ + ++++ Sbjct: 281 AKEIVKGMETDFNMDIPVDEVGYITMHIRGAKQRSSSNHKALNLDDIEIMEITNKMIDLA 340 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + +++ L L HL ++NR + I N L +E Y Sbjct: 341 EDEFKISLKNDERLFKDLANHLGPSINRLNMGLEIRNPLLDEIKSKYSYAYDGVEKISRI 400 Query: 306 FESEYGV-HLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELT 363 + + + + + E G +A+ F + + + ++ I++ + ++ Sbjct: 401 IKDKLNINSIPESEIGYIAMHFASAIEKNLMMNTNINIVVACPTGIGTSRFLSTKIENKF 460 Query: 364 LLPLNIKHMSVKAF-LQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 ++ +S + + LI++ + L I ++ ++ I++ Sbjct: 461 PNLNILETISAINIDEEYLKEKDVDLIVSTVELNTSLN---YICVGPFMSLDDEQIIKEK 517 Query: 423 LES 425 ++S Sbjct: 518 IKS 520 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 35/333 (10%), Positives = 79/333 (23%), Gaps = 34/333 (10%) Query: 16 RRCQILLTLFQPGL---TATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 R+ +I+L + + T++ + + D+S + + Sbjct: 12 RQKKIILMIVENSKKNIPITISEIAGTLELSSRTVLRDMSGIEK-WFDENDFNFVKKPGV 70 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 +E + + K E + RN + L Sbjct: 71 GLILE-----------------ENIENQNFIIELLEEEKIEKEYSKEERNLIILSKLLVS 113 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 + L E + Sbjct: 114 NEPVKSYYFAKILKVSEGVLNNDFALASKWLERFDIELVRKPGLGVYLKGQEKNFREAYV 173 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 E L M S D + +R L + ++ + Sbjct: 174 NLIYD----SFNEKEILDMVRNISENIQTDKAIEILSENRLLNLMDRCIIRKVEATLTKK 229 Query: 253 FYDEQGL-----CDQLYTHLAQALNRSLF--AIGIDNTLPEEFARLYPRLVRTTRAALAG 305 D L H++ AL R I +D +E + + + + G Sbjct: 230 LSDLDVNLADSAYIGLVVHISLALQRIKNGENITMDKEFLKELSIT--EEFKLAKEIVKG 287 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHE 338 E+++ + + +E G + + + + H+ Sbjct: 288 METDFNMDIPVDEVGYITMHIRGAKQRSSSNHK 320 >UniRef50_B0P2P0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P2P0_9CLOT Length = 698 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 61/420 (14%), Positives = 141/420 (33%), Gaps = 19/420 (4%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 LS +RR L T++ +++ V D+ E R +L +L + Sbjct: 81 YTYKLSKEERRMLAAAILINTKDHITLSQIADILYVSRATIINDLDEVKR-MLESGKLKV 139 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFIT-SQFTPALKSELKRRGIARNFYD 125 + + R+EG ++RL L + G T F L E+K + Sbjct: 140 ISYSNKGLRLEGLEGDKRLFLLRLMSVGSNGIKENSTIRSFFKGLNMEIKMSEDEQR--- 196 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 NLQ ++N + +L YL + + G + ++ Sbjct: 197 --NLQKIINEQEHAYGRFMTDDSFDYLLQYLMLSIERIRNGNVMTEPIE-----GNKSKY 249 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 +A++I ++ + E F+ + + R Q+ L+ ++ + H Sbjct: 250 AMAKDIQKYICQYWDLEDAKGEVDFLCGVLDSMSYVKRQRRE-QKIIGLQLVTRKFIEHI 308 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + V + + L HL + R F + + +++ P+++ + Sbjct: 309 SKDLGVNLNRDFAFYENLTDHLESIIMR-SFNVTQRDDFLKQYVEKNPKVLEVVQKYKDM 367 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTL 364 + +S+ E + + A L + E +++++ G + ++R Sbjct: 368 LSNFMDREISEIEIDYIVIHICAALERRKKKEVEFRVLIVCGGGIGTSQLLLAKMRNRFD 427 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 ++ + L + L+I+ +PL + I + ++ +E Sbjct: 428 F--HVVDVVSAHLLDNEKYQNIDLVIST--IPLRDYEGEYILVSPVFSDEDYLRVNGKIE 483 >UniRef50_Q5WCM9 Transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCM9_BACSK Length = 686 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 71/416 (17%), Positives = 144/416 (34%), Gaps = 25/416 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L+ QR ILL L ++ F G + D+ + +E + QL + Sbjct: 88 LTEEQRVHFILLMLLAKKEELSLLHFHSQLGYSKNTILNDLKKV-QEFVTPFQLVVRYSR 146 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y +EG L R L H + G ++ + + Sbjct: 147 KYGYLLEGKELQIRKLLIHLTEVVVQTQTG-----------RRQLEIGTDIGKHEISEVH 195 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 A + ++L +F + + L L + G P++ E+Q +E Sbjct: 196 ACIEKVEQKLGIQFTDEKLMAMPYILTLVLKRISIGHVLPPFPIEYDELSDTKEYQATEE 255 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSM-LRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 I RH + VP E LF+ L R +A + L ++ ++ F + Sbjct: 256 IFRHLK-----DVPKQERLFVTLYLLTTSRYWTEWVNAEEELPDLMPALADVLRLFEKSA 310 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + + L +L H+ A R + + Y L + +L E + Sbjct: 311 CIYLQERDLLLKKLIQHIKPAYYRMKYELTAVEAAKPILPDEYKELHHIVKRSLGPLERQ 370 Query: 310 YGVHLSDEESGLVAVIFGAWLMQEND--LHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 G + + E V ++ G+W+M++ + + + I++ + ++L EL + Sbjct: 371 LGKRMPEAEKMYVTMLIGSWMMRQGESINKKIKAIVVCPQGVSVSGFMLKELSELFPEFV 430 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + +SV+ F L+ + + + L T L + ++R+ + Sbjct: 431 FLDSLSVREFQTCDLA--FDLVFSQTPLET---NKRLYMTSSLLRKEDRARLRRQV 481 >UniRef50_B2VI26 Stationary phase-inducible protein n=7 Tax=Enterobacteriaceae RepID=B2VI26_ERWT9 Length = 422 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 188/423 (44%), Positives = 254/423 (60%), Gaps = 4/423 (0%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 L+ + LS QRRC++LL L P T+A+ +LNG D +A DI+E EI R H Sbjct: 4 DYLSEGAALSTAQRRCRLLLMLLLPNHDVTLASICQLNGGDRTLARQDIAELAAEIQRNH 63 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 L + G + GT L+QRLCL H LRR RL P F++ F A+K L + + + Sbjct: 64 HLAINPDEAGHLYLSGTPLDQRLCLLHGLRRALRLSPQFVSGWFADAVKRRLLTQPVDKA 123 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 YD+ NL L+ CS++L + F +RD FL ++L+Y L H P+F+P QR+W Sbjct: 124 LYDEHNLTVLIQHCSQQLAREFSARDGFFLQIWLRYSLAWH---CQPEFSPRQRQWLLGK 180 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 E+ +A+EI R WQ+R + + L+FS L P + +R L Q+++ + Sbjct: 181 TEYVLAKEIARCWQKR-GYQTDAHLAMLLTLMFSQLHTPLAATVTGENERALLQAVESSI 239 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 F+ + + F L +LYTHLAQAL R+LFAIGID+ L E YPRL+RTTR A Sbjct: 240 ARFQHIAGIEFRHRPDLSARLYTHLAQALERALFAIGIDDNLSENICLHYPRLLRTTRKA 299 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLREL 362 + FE +Y V S +E LVA+IFGAWL+QEN LHEKQ++LLTG++ E QIEQQLREL Sbjct: 300 MKPFEQQYAVTFSHQEMELVAIIFGAWLVQENALHEKQVLLLTGDNPGLEQQIEQQLREL 359 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 TLLPLNIK+ V F AP G L+I+PY LPL+SPP IYT+L L HQ +R + Sbjct: 360 TLLPLNIKYQDVHDFQHNSAPPGITLVISPYPTSLPLYSPPFIYTELPLGEHQLRSLRTL 419 Query: 423 LES 425 LES Sbjct: 420 LES 422 >UniRef50_Q65NB6 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65NB6_BACLD Length = 683 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 63/422 (14%), Positives = 145/422 (34%), Gaps = 24/422 (5%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 + + + +R + + LF + A ++L V + D+ + E L Sbjct: 80 DIGRSFIFTQEERIKALYMFLFVRREPISSAHLTQLLQVSKNTVMNDVKK-ANEALTPFL 138 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 + + Y + G+ ++R+ + H L SF+ + + + + +R+ Sbjct: 139 VAIKYTRQRGYHLIGSEFDKRVPVMHHLS-------SFLQKPYGKEILHYILKISGSRD- 190 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 + + V L S+ + ++ +L ++ G +F+ + + Sbjct: 191 HKQQEFKRAVELVSKEYGLQLVEERLNEFIYFLMMYSIRVAEGKIVRFHQEEGELLKQSP 250 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 A + PV E ++ + L L Q ++LV Sbjct: 251 LKNAAVRLVNEL----RIPVHETELCYILIQLLGLSFGQQPAHDP-----LYQLCEKLVF 301 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F + F + + + LY HL A R + I I N L + + + L + + Sbjct: 302 EFESRACITFPRRREVAESLYRHLKPAYFRMKYRIPIHNPLLSKIKKEHKELFTIVQKLM 361 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRE 361 E+ + +EE G + + FGA L Q ++ +K +++ + + +QL Sbjct: 362 RHLEALLNKPVPEEEIGFITIHFGALLEQPVQSGSSKKTAVVVCPSGVSSSLMVRRQLES 421 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 L + K MS++ F + + + +T ++ ++ Sbjct: 422 LFSEIVVEKAMSLQEF-TPDVFDHYDAVFSTVELKTKKR---YYMVRPLMTPAEKSRLVN 477 Query: 422 ML 423 + Sbjct: 478 EV 479 >UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-binding protein n=3 Tax=Staphylococcus RepID=B9CU63_STACP Length = 675 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 66/416 (15%), Positives = 134/416 (32%), Gaps = 9/416 (2%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 LS +++ IL L Q + + GV + + E L +QL+L+ Sbjct: 87 DLSIEEQKVIILYALIQAKHAIKQFSLAHEIGVSIQALAKL-LDDLEEELLSYQLSLSRK 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 ++G +R L + + + +S + + + Sbjct: 146 RGEGVYLKGPESKKREFLSQLMVNNLNSTSVYSVIENHFVYQSLNHSQQSLVDLDRIFKI 205 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++ +L L +++ + + G N + E +VA Sbjct: 206 ERILMDYLGQLPYTLTESSYLTLTIHIVLSITRMQNGEYVSLNKDIYETVKDTFEHEVAT 265 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 EI + + E F+ + + + D + I++ VN + Sbjct: 266 EIAKRLEEIHNVEFNQAEITFITIHLRGAKRKGTKDSNSEEDNS-SKKIRQFVNTVTRIS 324 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 F D++ L + L H+ A+NR I N L E YPRL T AL Sbjct: 325 GQHFKDKENLIEGLTLHINPAINRLKSNIETYNPLTEMIKFKYPRLFETIHKALHMV--W 382 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 + + E + + FG + + I+++ + + +L ++ I Sbjct: 383 SDLIFPESEIAFIVLHFGGSI-KNQGNRFLNILVVCSSGIGTSRLLANRLEQVFSEIERI 441 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 SV L II+ + + P + + L H+ + L + Sbjct: 442 TQASVSD-LNVLDLNNYDGIISTVNLDIEA---PFLIVNPLLPEHEVSYVASFLST 493 >UniRef50_C8Q416 Transcriptional antiterminator, BglG n=1 Tax=Pantoea sp. At-9b RepID=C8Q416_9ENTR Length = 505 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 63/418 (15%), Positives = 135/418 (32%), Gaps = 19/418 (4%) Query: 13 APQRRCQILLTLFQPG-LTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 +R + L +++ +E + D+ + I + L + + Sbjct: 87 KSKRLISMTTDLLSDSPDPLSISALAEKYFISRSSIVEDLKKIEVWIAK-FSLAI-SKNH 144 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + GT N R+ L + S+ + +L + N Sbjct: 145 SGTFISGTDYNIRMALKEIITHSVLSNYQMTDSRIDRFSRVQLIA---EFGQENVANCMN 201 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE--SCLEFQVAQ 189 L+ L LQ L +L L + + P N ++ + E+++A+ Sbjct: 202 LIALIEEELQGSISEPYYTNLFSHLLVTLRR---NLHPGRNMAEQTFFIRYDNREWRIAE 258 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVP---DPLRDAHQRDRQLRQSIKRLVNHFR 246 + P E ++ + D + D + LVN Sbjct: 259 NAILWLENEYQTRFPAIEVNYIYQYIISSGMHPVTVAETDNNHHDCTAMEYAGLLVNRLS 318 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 ++ F + GL L +H+ LNR ++ I I N L EE + ++ + + Sbjct: 319 ASLDIDFSRDAGLKKALASHIKPMLNRLVYGIVIHNPLLEEIRNEFNQVFTAVKQTASAI 378 Query: 307 ESEYGVHLS-DEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 E + L D+E + + L + +K++IL+ + + ++ Sbjct: 379 HQEQHLALPSDDEIAWLTIYIQNALEKTKA--KKRVILVCSSGIGTSQLLSSRINRAFPE 436 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I + +T + LII+ + L P+ Y + + ++ + L Sbjct: 437 WEIIDIVPGARLKKTLQGQPCDLIIST--IRLDDIELPVAYVSALFSRNDIARVVECL 492 >UniRef50_C3WDH7 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH7_FUSMR Length = 675 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 53/417 (12%), Positives = 143/417 (34%), Gaps = 17/417 (4%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 P + S+ +R ILL + +T S+ + + + + +L + L L Sbjct: 79 PYIPSSKERELFILLNICLIR-KIKQSTLSDFLDISISTVKAHLRDIRK-VLDVYGLKLE 136 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 +EG+ R C + R F+ + L + Sbjct: 137 ILPKKGLVIEGSEEQIRQCTLKAITLCKREKSKFLDNIIYEYL-----------GDINQE 185 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++ +N C + ++K + Y+ + + + N + E+ E++ Sbjct: 186 GIKLFINYCQKLMEKIISDEAYDIILKYITLVIYFNKNDNKIK-NIKNSNFLENTKEYEA 244 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 + + +E L + F + ++ ++ +K + + Sbjct: 245 IIQSKALLEGFYEMEFSKEEYLKITDYFLGSHTYNITYSYYENWVEIEIMVKSFIEQVNK 304 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 V +++ L L H+ + R I ++N++ E YP L + A+ E Sbjct: 305 ELEVDIANDETLILGLINHIKPTIYRIKNGIELENSIYGEVVESYPNLFSIIKKAVEKLE 364 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREAQIEQQLRELTLL 365 + G+ +++E + + F A + + + + +++++ G+ + QQ++++ Sbjct: 365 NFIGITFTNDEIAFLTIHFKAAIDRNIKIKKEKLKVLIVCGSGYGSSKLLAQQIKDIYR- 423 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + + + + LI+ + + +I + L+ + + Sbjct: 424 VEIVDAIPRYLLEKVERRKDIDLILTTVPLDNFNTNRDVIRVNPILSKEDIQSLDNY 480 >UniRef50_A6LQ03 Transcriptional antiterminator, BglG n=3 Tax=Clostridium RepID=A6LQ03_CLOB8 Length = 683 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 60/423 (14%), Positives = 123/423 (29%), Gaps = 5/423 (1%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + P +LS QR+ I+ L + F V SLDI E L Sbjct: 79 LDMVPIPWLLSKEQRQIVIICELLVSNEPLKASYFCHKFNVVMGSISLDIDNIE-ERLIS 137 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 L + ++G+ N+R L I Sbjct: 138 KNLCVIRKRSYGISIQGSEWNKRNALVELFFDFKPFEDLIAFLYDEKVDPIVKTLFNIVF 197 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 ++ ++ + L + + + + G + S Sbjct: 198 GNEAIQLVKDILKDIDFDY-LKGNDVKYFSLFIQVLLSIKKTKNGEIIYLPQEIKNSILS 256 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 E++ Q +G Q+ + DE +++ L S + + + D K + Sbjct: 257 LEEYKKIQYLGSVLQK-NNIDICEDELVYLCLYLSDYKYFFNNKHLIESDINYENIAKEV 315 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 V ++ L L H Q + + N L E Y L + + Sbjct: 316 TEEISTKIYVDITKDEQLIRDLTQHFKQTFYMLNLGLKVINPLINEIKEHYSELYKIIKN 375 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREAQIEQQLR 360 S Y + EE G + + + ++ + + + ++L + + +++ Sbjct: 376 TCRLIFSRYNFKIPPEEVGYITMHIAVAVQKQQAMSKNIKALVLCPSGIGTARILCSKVK 435 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + I +S+ LI++ + L LI +T E I Sbjct: 436 SIFNEINVIDVVSLHDINSIIDKNKYDLILSTVPVNLKTKH-NLIVVSHFMTEVDIENIS 494 Query: 421 KML 423 + Sbjct: 495 NFI 497 >UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli RepID=C2BXN0_LISGR Length = 646 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 47/415 (11%), Positives = 138/415 (33%), Gaps = 17/415 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S R + L + ++ V I E + + + + + + + Sbjct: 88 SIQDRITHVYSRLLNTKGHLKIQDLADELFVSRATMENTIKEIRKRLEKE-GVAIVSNRN 146 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFR--LCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 +++ T +R + + + + + + + + ++ Sbjct: 147 -GLKIDATEKMKRHFMSDVISYYWGGVTATNLFKKEELELGINMIGDTTNIIDVNLLHSI 205 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 ++N+ + + L ++L + + + A Sbjct: 206 TNVLNIFIESTSLQVTEYEYQSLSIHLAIAIERIKKNFYIDKKIAPANAPS-----KYAT 260 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + + +P E ++ + + + + L S K + Sbjct: 261 LLIELLEEKFQIQLPDYEREYIDIHILAIEKSSLNDTDGEMLQVLDDSEK--LQQIIRST 318 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + ++ L + L HL A+ R + I N EE + + + E+ Sbjct: 319 LGGYSPDEELINSLLVHLNAAVKRLKLEVSIHNPYTEEIKGNFSGAFAISIELASAIEAG 378 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 + + L+++E + + ++L +E ++++IL+ + +EQ++R+ L++ Sbjct: 379 FAIKLNEDEIAFITLHIQSFLDRE-AQTKREVILVCSSGYGTSKLLEQRIRQTFGAALHV 437 Query: 370 K-HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K + ++ + LII+ +P+ + P++ +T ++I L Sbjct: 438 KQVLGIRDLQKANIQDE--LIIST--IPIEKSNSPILVVSPLMTNADIQKINTFL 488 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 86/311 (27%), Gaps = 39/311 (12%) Query: 22 LTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVL 81 L T ++ V AS + + ++ + + GT Sbjct: 13 LKYLIEHRHTTYNELAQYLNVSTKTASKYVRILQESLAEEEEVAIHVKPRFGIEMVGTEE 72 Query: 82 NQRLCLFHWLRRGFRLCPSFITSQFTPALK---SELKRRGIARNFYDDTNLQALVNLCSR 138 L R IT ++ L + F ++ + + Sbjct: 73 AWLSILLSMQRPKNDSIQDRITHVYSRLLNTKGHLKIQDLADELFVSRATMENTIKEIRK 132 Query: 139 RLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRR 198 RL+K ++ + G+ +R ++ I +W Sbjct: 133 RLEKE-------------GVAIVSNRNGLKIDATEKMKRHF-------MSDVISYYWGGV 172 Query: 199 ALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQG 258 + E L + + + D L SI ++N F E +++ + + Sbjct: 173 TATNLFKKEELELGINMIG-------DTTNIIDVNLLHSITNVLNIFIESTSLQVTEYE- 224 Query: 259 LCDQLYTHLAQALNRSLFAIGIDNTLP-EEFARLYPRLVRTTRAALAGFESEYGVHLSDE 317 L HLA A+ R ID + Y + E ++ + L D Sbjct: 225 -YQSLSIHLAIAIERIKKNFYIDKKIAPANAPSKY------ATLLIELLEEKFQIQLPDY 277 Query: 318 ESGLVAVIFGA 328 E + + A Sbjct: 278 EREYIDIHILA 288 >UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N6K6_9FIRM Length = 644 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 66/417 (15%), Positives = 133/417 (31%), Gaps = 20/417 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S+ R +L L ++ ++ V + I + I + L + + Sbjct: 92 SSQDRIKYLLNLLLYSDEYMSLDDLADNIYVSKNTLQNYIKTL-KAIFSKYNLEYISKTN 150 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ G ++R CL + FT + + D L+ Sbjct: 151 VGVKIIGNEDDKRKCLVE---NVLSYNFQNYVTGFTKDEYTLFEG-------IDLDLLKQ 200 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 +++ + + + L ++ + + N + +I Sbjct: 201 IISNKLKNAHIKTNDFNFKNLIIHFALMISRIQFDCYINTNNTIKIDDNYTD---FIDDI 257 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + + E ++ L D D ++++ ++ L+N+ N Sbjct: 258 ANEIEYTFNITISEGEKKYIYSHLVA---NTQLNDLVDNDNKIKELVEELLNNIYFDYNF 314 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 +++ L L+ H LN FA+ N L +P T A ++ Sbjct: 315 DLRNDEILSHDLFLHFKSILNTKSFALNKRNPLLNTIKTNFPLAFDITLTCTAKIFNKPP 374 Query: 312 VHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 L+++E G V++ GA + + L K +IL+ G+ +E +L + I Sbjct: 375 YILTEDEVGYVSLHIGAAIERCFSGSLQNKSVILVCGSGQATTRMLEARLNVFFKDKITI 434 Query: 370 K-HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 S F+ + T+PL P I D L E I K L S Sbjct: 435 VRKASYNEFINYTKRELLNIDFVISTIPLKSEHIPTITVDFALNNQDIEAISKFLTS 491 >UniRef50_Q5WC76 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WC76_BACSK Length = 706 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 60/413 (14%), Positives = 127/413 (30%), Gaps = 11/413 (2%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 A R ++ F T+ + E V DI E+L L + + Sbjct: 84 DAADREAFLVFAFFYAEEKVTVPSICEHLLVSKSTVDKDIQRLRTELLAD-NLRIDSLPK 142 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + V G+ +R LF +L+R R + Q A E + + L A Sbjct: 143 EGFAVVGSEFAKRRWLFRFLKRACRNRGLDMLKQSEAATFFEDYCCKLVEATALEQTL-A 201 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + ++ RF + LY L + G + + A + Sbjct: 202 WIRTIEQQKNGRFTYETHLEIGLYALLALKRIKMGYLLTEKVMVPEQLDKQ-----AFAL 256 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + + + E ++L S + L Q++ ++ V+ + + Sbjct: 257 AQTFDFQKPVTELNTEIYVLSLFLSTAKEEQFLFKMEGNWGQIQVAVMDFVHSITKQTGL 316 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 F ++Q +Y H+ R + I+N + + + YP L R A E Sbjct: 317 PFVNDQEYFSSIYAHIQTMARRLKNELPIENPIADVIVKQYPDLFAACRMAGNELERTLQ 376 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 + + +E + + + + +++ G+ IE+ L + Sbjct: 377 LTIPIDEIAYLTMHTCVASERLKRQTLVYRTVIICGHGITNARLIEESLYARFSSIEVLG 436 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +S + ++ +PL + P + I+ + Sbjct: 437 TLSRYEVDVIQKLQ-VDFVLTT--LPLSIKGVPCLQVSPFFKDEDTALIQTTI 486 >UniRef50_Q9KGB4 BH0193 protein n=3 Tax=Bacillus halodurans RepID=Q9KGB4_BACHD Length = 683 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 64/420 (15%), Positives = 146/420 (34%), Gaps = 25/420 (5%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 AP LS +R +LL L ++ F+ V + D+ + L LT Sbjct: 82 APQPYLSKAEREDLLLLML-VSSDDLSLHHFTSELAVSQNTILSDLKTV-KTFLAECDLT 139 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + Y + G N R +FH C ++ Sbjct: 140 IRYSRKFGYYLHGNEFNIRRLIFHL------TCKWLTMGDGASRIQRVAGITKEEVG--- 190 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 L+ ++ ++L F +I + L L + G + ++ Sbjct: 191 --ELKRRIHTLEQKLNLTFTDENIQSMPYTLLLILKRIKLGRLINRFSIHYEELSDTKQY 248 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 +E+ ++ +P +E LF+ L V + L ++ ++ F Sbjct: 249 HATEELLSGFEE-----IPREERLFITLYLLTTNVYWSKTSTEGQVPNLLPALVDMLRLF 303 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + +++ L +L H+ A R + + + + + Y L + ++ Sbjct: 304 EKRACIALQEKEQLLTKLLLHVNPAYYRIKYQLTEMSKTSTKISEEYKELHHLVKQSMKP 363 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQEND--LHEKQIILLTGNDSEREAQIEQQLRELT 363 E+ GV + + ES + ++ G WL ++ D + + I++ + +L+EL Sbjct: 364 LETLIGVEIPENESSYLTLLIGGWLTRQGDSIQKKTKAIVVCSKGVSISRFLLSELKELF 423 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + +S++ F P L+ + + L T L +++++++ + Sbjct: 424 PDFIFLDSLSLREF--AIYPLNYDLVFSTIPLDTTKK---LFLTSSILEREEKKRLKEQV 478 >UniRef50_C3RJ67 Transcription antiterminator bglG n=3 Tax=Bacteria RepID=C3RJ67_9MOLU Length = 635 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 60/421 (14%), Positives = 132/421 (31%), Gaps = 17/421 (4%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 ++ +R I+ L + + V DI + + I Y L Sbjct: 75 KDIIPQTSQERCIYIIQELLFKSHEINLIALQDQVFVSGYSIDNDIKKIRKMINDYPSLK 134 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 L + +EG ++R L + + S N +D Sbjct: 135 LVRSKNY-ISLEGNETDKRKLYKQLLTAETQGNFMNLNSIAGLW------------NSFD 181 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 ++ ++ + + + ++ + + + + ES E+ Sbjct: 182 LLEVKDILEEICEKYDYQIHEMTFPMIMIHAGVAIERIINHNYIKNQTI-SEKLESSREY 240 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRD--RQLRQSIKRLVN 243 Q++ + + DE + ALL R D +D + + ++ ++ Sbjct: 241 QISYDFFTQVSTMINIELVTDEVILFALLLMGKRANDYRKDIIKEKLAVDVEHLVEAVIV 300 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 +E ++ F ++ L L HL L R + + N +E R YP + A Sbjct: 301 EVKEYFDIDFSKDKDLKVGLAMHLQSLLERQKNNVQVTNVYLQEIKRKYPLVFEMAVRAG 360 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 ++++ E +A+ GA + N L + I++ N+ +L+ Sbjct: 361 EVLAETCEDNINENELAFLALHLGAAYDRVNSLKRYRAIMIIPNNQMLSKMCRDKLKIRF 420 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + I LII + L + P + L + + ++ + L Sbjct: 421 EERMMIVQSYGFFEESMVKEEEPDLIITTVPLKHNL-NIPTVQVTLFINYEDESKVFQTL 479 Query: 424 E 424 Sbjct: 480 N 480 >UniRef50_B0MGN0 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGN0_9FIRM Length = 679 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 61/428 (14%), Positives = 125/428 (29%), Gaps = 14/428 (3%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 +M LS +R+ + + L T A SE + D+++ L+ Sbjct: 78 IMNNDFYTYHLSKNERKTILAMLLLNQEKYVTAAWISEYISTSRNTVISDLNDLKDWFLK 137 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 H + L + Y VE + + R + L F LK Sbjct: 138 -HNMKLVSQVQKGYIVEASEGDIRSGMLKLLELNLDEEKYGAMGAFHVFGHLLLKEIQYQ 196 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFN--PLQRRW 178 + +Q ++ R L + G T + P Sbjct: 197 GRY---ETIQKVLREEELRHDCFLSDFSFSVAVYELLILAERVKKGKTLEQERQPDWENA 253 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 + S + +++ + +P E + + + + I Sbjct: 254 SLSSK-YPLSRAVLDRLAEEFSLDIPAAEAENF-VFCLRRKSYLKSGTNNVDQLVIPVLI 311 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 ++ + FY + L D L H+ ++ R ++N E + YP + T Sbjct: 312 GEVIYRIISRFRINFYLDFALYDLLVDHMKSSVYRMSSGEVLENPFRGEIEKGYPEVFCT 371 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN----DLHEKQIILLTGNDSEREAQ 354 L E GV + +E + + F + L ++ + +L+ Sbjct: 372 VEECLKPLEDYLGVKVPRDEVSFLVMYFASMLERDKLERMRERKVPAVLVCAMGRGTVQL 431 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 + +L++L + S G L+I+ P ++ L Sbjct: 432 MLAKLKQLEDVLEITDVRSSHELKDMGNINDQ-LVISTVAFP-DGEIKNILMVSPLLEQE 489 Query: 415 QQEQIRKM 422 +IR+ Sbjct: 490 DIYRIRRK 497 >UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Anaerococcus RepID=C7REJ5_ANAPD Length = 625 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 49/409 (11%), Positives = 133/409 (32%), Gaps = 26/409 (6%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R I+ +++ V + DI + + +L+ + + L + + Sbjct: 96 RIESIMKLFLFSNSFIKQQELADMFYVSLSQINKDIKKVRK-LLKAYNIELISKPYYGMK 154 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 ++G + RL + R P+ L T +QA++ Sbjct: 155 IKGREKDIRLAI----RNEIGEDPAIFARDSDEELF---------------TRIQAIIAD 195 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + L +++ +L+ G + + S EF +A ++ + Sbjct: 196 IDFPESFYMPYANFKNLVVHIYISILRIKEGKYIDLSDELSKRVISYDEFNIANKVVKEL 255 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 ++ P DE L++ + ++ + +++++ ++ F Sbjct: 256 SKKLDLTFPEDEILYLTMHLISKNAVTNYEKVSP---EISELAQKMIDEIYKVSKYDFRS 312 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 L L HL + R + + + N + + A Y + Sbjct: 313 NIDLFFALALHLGPLIERLRYGLTMKNPILNDIKDN-QIAFMLATVATNPINETYKTRVC 371 Query: 316 DEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVK 375 D+E G +A+ + + N ++ I+++ G+ + ++ Q+ ++ ++ Sbjct: 372 DDEIGYIALHIASAME-NNTYLKRTILVVCGSGNSSAQIMKTQIERKYKEQIDSLTLTDL 430 Query: 376 AFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + + I++ + P++Y D+ +I + Sbjct: 431 SKVDLYNLDKFDFIVSSVPIK-QKTDTPIVYVDVIFKQKDFMKINDIFN 478 >UniRef50_B9Y4W4 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4W4_9FIRM Length = 506 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 58/421 (13%), Positives = 136/421 (32%), Gaps = 15/421 (3%) Query: 12 SAPQRRCQILLTLFQP-GLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S RR +I L L T+ + SE V D++ + I R LTL Sbjct: 90 SVEDRRHRIYLDLLLNAPQPTTIRSLSEKYYVGSSSIVNDLAAVEQRI-REAGLTLNRTR 148 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + G L R + L + P T + ++ Sbjct: 149 -EGTYITGRELTIRNEVAGVLNKIHHFDPLPRNELPTRLNEENRMVLAGIYGIQSLRQVE 207 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 V + + ++ + + + + + L ++ Sbjct: 208 QCVGEIEEAIGVVLGDIYYINIVTHILIAMERMRSRRYINPGGVMDPKLINPLIYKKIAA 267 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDA------HQRDRQLRQSIKRLVNH 244 + + + PP+E L++ F V + + ++ + L+ Sbjct: 268 CVQTFSQAVQITFPPNELLYIYTHFMGCGVGELPKREVIGQTLQSTQPEVLAFCEELIQQ 327 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 VRF ++ L L H+ + R + + I L E+ +P++ ++A+ Sbjct: 328 MEAETQVRFTEDANLFYSLLLHINSMITRIQYNVRIVCLLREKTVAEFPQMYAQVKSAVL 387 Query: 305 GFESEY--GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLREL 362 + +Y +S++E + + F L ++++L+ +++++ + Sbjct: 388 ELKKKYYPKHFISEDELCYLCLYFQLALE--PKTPRRRVLLVCSTGIGTSHLLKKRVATV 445 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 +S++ L+ LI+ + + P + + L E++R+ Sbjct: 446 FPELEIAAVISLRQ-LKNRDVSDLDLILTTVGLDFEISC-PSVTVSVLLDPKDIEEVRRA 503 Query: 423 L 423 L Sbjct: 504 L 504 Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 87/327 (26%), Gaps = 51/327 (15%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT---GYD 71 +R+ QIL L + G D EIL L+L Sbjct: 6 ERQLQILRLLAANTEPLRGPELARQFGCSVKTIQRDFKRI--EIL---GLSLDYTLTRSI 60 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLC---------PSFITSQFTPALKSELKRRGIARN 122 ++ + R L W+ G RL A + R + Sbjct: 61 QGIALDCGNAD-RSRLNRWIYGGERLNAGDSVEDRRHRIYLDLLLNAPQPTTIRSLSEKY 119 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + +++ + +R+++ L + G Sbjct: 120 YVGSSSIVNDLAAVEQRIREA-------------GLTLNRTREGTYIT-----------G 155 Query: 183 LEFQVAQEIGRHWQRRALQP-VPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 E + E+ + +P +E + L + + A Q + +++ Sbjct: 156 RELTIRNEVAGVLNKIHHFDPLPRNELP------TRLNEENRMVLAGIYGIQSLRQVEQC 209 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 V E V D + TH+ A+ R I+ + + P + + A Sbjct: 210 VGEIEEAIGVVLGD--IYYINIVTHILIAMERMRSRRYINPGGVMDPKLINPLIYKKIAA 267 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGA 328 + F + E + F Sbjct: 268 CVQTFSQAVQITFPPNELLYIYTHFMG 294 >UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotransferase n=2 Tax=Selenomonas RepID=C4V3X4_9FIRM Length = 644 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 55/416 (13%), Positives = 135/416 (32%), Gaps = 27/416 (6%) Query: 14 PQRRCQILLTLF---QPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 ++ I+ ++ T ++ V ++ T + + + + Sbjct: 96 EDQQNYIISRFLECCLKNVSVTQMMLADEMYVGLSTIKSYLNSTRKHF-DAYNIHIVQYK 154 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 R+E R +L + L + ++ Sbjct: 155 TEGLRIEAAEGTLRSFFVDYLHEV-------QDKKLCHILFERITYD----------QME 197 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 +++ + + H L + + + G + + + E E+ A+E Sbjct: 198 EILSQAGNVRRLQLTDSARHDLAVQTALSIQRSLTGHGIECSSSMAQKLEDTFEYSAAKE 257 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I +P E ++ + + D +++ +++++ + Sbjct: 258 ILNKILNSIGVDIPYSEVFYLTQCLLTGKKLLD-AGSGVNDEHVKELVEKVLVDVDKKFG 316 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + F ++ L D L HL A+ R F + I N L + YP + A Sbjct: 317 LDFTADEYLKDGLALHLRIAIARVNFHVNIRNELLSSVKQDYPLAFQIAVYAAKLVRDID 376 Query: 311 GVHLSDEESGLVAVIFGAWLMQEN---DLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + ++ E G +A+ F A + + + + K + ++ ++ +L+E + Sbjct: 377 HIEFNENEIGYIALHFCAAMSRNSIAEEEQPKNVYVVCSAGLGVSVLMKAKLKEHFRSSI 436 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ + L A II+ +P +I + L T E+IR++L Sbjct: 437 HVIDILPAYKLTEKMQEEADYIISTVPLPSNSSK--IIRVNHMLRTDDIEKIRRIL 490 >UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U731_9LACT Length = 641 Score = 236 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 68/421 (16%), Positives = 151/421 (35%), Gaps = 30/421 (7%) Query: 13 APQRRCQILLT---LFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 R I+ L T+ ++ V D++ ++ L+ + + L Sbjct: 93 QQSRIEWIIRKFAVLSMEKKECTLEKLADELFVSLTTLKKDMNSV-KDTLQKYHIQLAKI 151 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + +++G N R + +L R + + D ++ Sbjct: 152 SNKGLKLQGEEKNIRQLIVDYL---------------VLEQSELKLDRIFSISSTDKVSV 196 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHH-AGITPQFNPLQRRWAESCLEFQVA 188 + +V R+ Q L ++++ + + + P E+ A Sbjct: 197 EEIVIRNIRKYQIPITDIGFRNLIIHVEIAISRLRFQNNSIDQKPNTIEE--HSDEYYCA 254 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQL--RQSIKRLVNHFR 246 + I + + + +P +E + L + D + + + I+R++ Sbjct: 255 KAIAKEIEAKINLTIPENEIANIYLHLLGQKRMLVSEDTLESRLETPESELIERVIVEIN 314 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 E+ + F + L + L HL AL+R + I+N L EE YP ++ + + Sbjct: 315 EMYQLDFRQDVILKNGLLLHLESALHRIRLNMPINNELIEEIKNNYPFPMQLAKILASSL 374 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDL---HEKQIILLTGNDSEREAQIEQQLRELT 363 E+ + + + E G + + F L + N + E + +++ ++ +L+ T Sbjct: 375 ETNFNIKIDINEVGFLTLHFCGALERANSIQSNKEIRAVVVCTTGLGTSVLLKAKLQSKT 434 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLF-SPPLIYTDLTLTTHQQEQIRKM 422 LNIK + V A Q + I T+PL S P + ++ + E+I + Sbjct: 435 --NLNIKVVGVYALYQLDDIEFTDIDIIISTVPLSKKYSIPDVVITPIVSNNDIEKIHEF 492 Query: 423 L 423 + Sbjct: 493 I 493 >UniRef50_A0KQ06 Transcription antiterminator, BglG family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KQ06_AERHH Length = 634 Score = 236 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 68/417 (16%), Positives = 143/417 (34%), Gaps = 24/417 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 ++ +R + + L + ++ + D++E RE L + L + + Sbjct: 87 PRTSRERVLHLQILLLTAEQGIKLDELADTWYLSRAALQGDMAEV-RERLAHFGLAIDSK 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 R++G R CL L + + L+S L ++ + Sbjct: 146 PRQGMRIQGGETAIRACLTQLLYQELLH---------SNPLQSLLPNLCPSKTL---EVV 193 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 ++ R Q R + L +Y LL+ AG + + + VA+ Sbjct: 194 GNHIHEQLGRHQLRLADESLQQLAIYCAVALLRQAAGHELRQFTSED---LTAPLLAVAR 250 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 +I +E +A+ D + + + Q ++ L+ + + Sbjct: 251 DIYGELPTLTPPG--EEEIACLAIQIQARLTADAPQLSPAMAAESEQLVEHLLAYIHQHY 308 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + L L TH++ L R + IG N L + + YP T AA++ + + Sbjct: 309 PYDLRGDLQLRADLQTHISAMLLRVKYQIGSHNPLADHIKQYYPLAYDITLAAISEWIRQ 368 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDL---HEKQIILLTGNDSEREAQIEQQLRELTLLP 366 L+ E G + + G L + D+ Q +LL + +E +++ Sbjct: 369 TPYRLTHHEIGYLVIHIGVGLERHYDIGYTRRPQALLLCDAGNATFRVLEARIKREYPQL 428 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 SV+ + +I+ + P++ T +Q EQ+ K++ Sbjct: 429 QLTMLESVRDYEGLARIEQ-DFVISTV--KAGEKNVPVVQVAPFPTQYQLEQLGKLV 482 >UniRef50_C9KLZ6 Putative PTS system, IIA component n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLZ6_9FIRM Length = 711 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 66/422 (15%), Positives = 131/422 (31%), Gaps = 30/422 (7%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 LSA +RR L T+ ++ V D+ I L L Sbjct: 95 YHYHLSAKERRAIAASLLVNSTGYVTLQQIADYLYVSRVTIINDLDAIRSIIEAD-GLLL 153 Query: 67 TTGYDGSYRVEGTVLNQRLCLF-HWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + + +EG+ ++R L H L + + +L Sbjct: 154 HSQPNKGLTIEGSESDKRQFLLAHKLINASFITGGHLEQHDNTSL--------------- 198 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 + L +VN + YL C+ + H G + + Sbjct: 199 EHILCKIVNEQEHVHNRTLSEAAFTRTVHYLLICVNRCHCGAYIEAPTDENPSPNYL--- 255 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 +++QEI ++ + V +E A + R R +L+ ++ + Sbjct: 256 ELSQEIMKYVSQYCHLTVTRNEQQAFASFLARQRFSRGTRSEKD-SLRLQLLTRQFIEAI 314 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTL--PEEFARLYPRLVRTTRAAL 303 + D L +HL L+ ++ L E+ A +P+ ++ + Sbjct: 315 SSELTPSLNSDFEFFDNLSSHLISTLS--QAGTESESALHTVEDIASRHPKAFQSVQRHA 372 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLREL 362 FES L+ E + V A L + + + +I++ + +L E Sbjct: 373 PLFESFSHRPLTRIELDYITVHVCAALERVRNDYMAFRIVVACHAGLGTSKLLMAKLHEH 432 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + ++ + A L+IA PL P I LT ++ + Sbjct: 433 FNF-HIVDVVAAHD-RKAMEDASADLVIATT--PLDRCPLPSIVVSPILTDEDYVRLGEK 488 Query: 423 LE 424 ++ Sbjct: 489 ID 490 >UniRef50_C0CYQ2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYQ2_9CLOT Length = 639 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 58/430 (13%), Positives = 135/430 (31%), Gaps = 25/430 (5%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 ++ S+ +R I+ +L + + + + D+ + LR Sbjct: 69 ILEESGTHIPQSSQERIVYIINSLIKSDTSVNTYDLCDEMFISYSTIKNDLQAV-KSKLR 127 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 + L L +D V G N+R L L + L+ Sbjct: 128 KYDLQLNNNHDN-LTVSGLEKNKRRLLSSILYDESNVNFVN------------LETIQNI 174 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 + ++ + R + L L++ + + ++ Sbjct: 175 FPEIEIELIKDSLLEIFDRFHYFVNDYSLINLVLHITIAIDRIR-NRNVNTEDIRDMPPI 233 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR------QL 234 SC E+++A+ I R ++ E +ALL + + + Sbjct: 234 SCHEYELARGIARKIEQDFRIEYNQAEVYELALLLISRATAIDYQSITVSNLADFITPEC 293 Query: 235 RQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPR 294 ++ L++ + + + L + H+ L RS N L EE P Sbjct: 294 LALVRELISDVNSYYYIDLTEPEFLI-RFALHIRNLLQRSKNNYFSRNPLTEEIKTSCPL 352 Query: 295 LVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLM-QENDLHEKQIILLTGNDSEREA 353 + + + + G+ ++D+E +A G+ L Q+N + L + + Sbjct: 353 IYDVSVCLSSTIKERTGISINDDEIAYIAFHLGSTLEAQKNLSEKVTAALYCPSYYDTNV 412 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 ++ + L I ++ + + L+++ + + PL+ T Sbjct: 413 KLTDTISRHFSSELLITNIFTEERELEKTGKN-DLVLSTVPLN-SVIQLPLLQISPFFTE 470 Query: 414 HQQEQIRKML 423 + +R+ L Sbjct: 471 KDVQSLRRQL 480 >UniRef50_C4FUH4 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUH4_9FIRM Length = 652 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 74/414 (17%), Positives = 134/414 (32%), Gaps = 22/414 (5%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 R +L L + +E V + D+S G LTL Sbjct: 87 EAYGPDDRERHLLKALCLDSGGLDLEDLAEQLYVSSVTLNRDLSRLGPRFQAC-GLTLVR 145 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 +V+G R CL +L+ ++ + + D T Sbjct: 146 QDGR-LQVQGRESAIRQCLRTYLQEWLYQMG------------EPIQDLVVFFHAEDITL 192 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE-FQV 187 Q +N S+ Q F + L L + G Q + S LE + Sbjct: 193 CQHALNQLSQTYQHDFTADYYLLLLLECLIIRRRGQLGQVLQVRAKELVRDLSHLEVYFF 252 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A E+ +AL + E +A + + +R+LRQ ++ L+ + Sbjct: 253 AGELLEAVTGQALVQLSAIEIESLAYTLLAVGF---KIQSPDYERELRQQVQALIQRVSD 309 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 NV +Q L L H++ + R + + N +E + Y L L F Sbjct: 310 FLNVDLSQDQHLLAMLANHMSSMIFRLRHHMHVTNPALDEIRKQYLTLFNIVWLVLRDFA 369 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 Y + + DEE + + F L I+++ + I +L+ + Sbjct: 370 EHYDMEVPDEELAFLVIHFQIALE--KVQRPLTIVVVCQHGLAASELILAKLQRIFSPSD 427 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 + ++ + RG L+I+ + P+ +T + EQIR Sbjct: 428 RLLNLKWQELADMD-WRGVDLVISSLDLK-EELPVPVQRVSPIMTQDELEQIRH 479 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 4/79 (5%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R+ +L L + ++L GV D+++ E L H L + Sbjct: 3 KRQMHMLDYLLKQTDYVASTQIAQLYGVSAKTIYHDLAKL-NEALAPHGLAIDKSPRNGV 61 Query: 75 RV---EGTVLNQRLCLFHW 90 R+ + R + W Sbjct: 62 RLDLSQADEARLRSLIKDW 80 >UniRef50_B6FYB2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYB2_9CLOT Length = 631 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 59/420 (14%), Positives = 129/420 (30%), Gaps = 17/420 (4%) Query: 5 LAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQL 64 + ++ +R I+ L + E V D+ + + I Y L Sbjct: 74 VKEIVPQTSHERCIWIIQELLFRNKEINLIQLQERVFVSGYSIDNDLKKIRKIIENYPSL 133 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 L + R+EG +++R + L L + Sbjct: 134 KLIRSKNH-IRLEGEEIDKRKLYKYLLTEETHGNFMN------------LNSIADFWTDF 180 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 D ++ + + + + ++ + + + R E Sbjct: 181 DLLAIKDIFEEVCEKYDYKIRETTFPMIMMHAGVAIERIINHNYLTSDIDDR--LVESTE 238 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 + V+ E + + DE +LL + R ++ +++ I RL+ Sbjct: 239 YHVSYEFFERVSKLLDIEIVDDEVKRFSLLLLG-KSSGDYRKSNNNKEDVKRLIDRLIEQ 297 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 E V F + L L TH+ + R + + N +E R YP + + Sbjct: 298 IAEYFGVDFSKDWDLKVGLETHIRSLIERQRNKVDVTNLYLKEIKRKYPLVFEMAIHSAK 357 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 E G + + E +A+ GA + + + + + +++ ++ ++L Sbjct: 358 VIEKFTGYVIDEPEIEFLALHLGAAYERIDSVQKYRAVVIMPHNQMLSKPCIEKLNSRFG 417 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + + M II + L P I L L + +I ++L Sbjct: 418 DRMEVVKMFTFFEESQVMEYEPNFIITTLQIKHNL-DVPTIQISLFLNYEDESRIFQLLN 476 >UniRef50_D1ARV2 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARV2_SEBTE Length = 705 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 62/427 (14%), Positives = 156/427 (36%), Gaps = 19/427 (4%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 + S +R+ +L+ + T T+ + + GV DI E + IL + L L Sbjct: 83 EDYIFSKDERQRLVLIFILLKTGTFTIQSVLDEIGVSLSTLKNDIREL-KLILGKNGLKL 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGI------- 119 +V+G+ + R + + L K LK+ + Sbjct: 142 VQIAKKGLKVQGSEDSIRRMILNILLESGLESFGTDQRDKIDVFKRNLKQIFLNSYSGTK 201 Query: 120 ----ARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQ 175 N + ++ + + + ++F +++ YL+ +L+ + + Sbjct: 202 AEKEESNLQTERAIREYLEEINEDMNEKFSDVLHNYIMNYLRLMILRIRNKKYLKEDLDD 261 Query: 176 RRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLR 235 + E+ E ++ + + +A + P E + + + + D + +Q++ Sbjct: 262 VLFLENIKEHKIIKSHINILENKADIKLTPQEI----IKIVEIYIENKNYDVNNSWKQVK 317 Query: 236 QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 Q ++ L++ N+ ++ L + L H+ A R I + N++ +E P L Sbjct: 318 QILENLISKVSSDINLDMTNDLILLNDLIYHMKLAAYRIKNNIKLKNSIYKEVEDEVPFL 377 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQI 355 +AG+E L+ +E + + F + + +L +K+I+++ G + Sbjct: 378 FGIVEKRIAGYEQYLDEKLNKDEIAFITIHFKMSIDRNYNLGKKRILIVCGLGYGTSKLL 437 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 ++ + E + V + +I++ + L P + + Sbjct: 438 KKIISEEFN-VEITDLIPVYQLEKYN-LDKTDIILSTVKIK-ELPDKPYLTINTIPNLQD 494 Query: 416 QEQIRKM 422 ++ I ++ Sbjct: 495 KKNIEQL 501 >UniRef50_D1AHL2 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AHL2_SEBTE Length = 681 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 62/417 (14%), Positives = 137/417 (32%), Gaps = 11/417 (2%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 S +R IL E V + D++ +++L ++L Sbjct: 76 KENYTYSKEERTDYILANYLFNSQNLKQINLEENLNVSSTTVANDMARV-KDVLSLNKLE 134 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + +EG N R + ++L + + + + D Sbjct: 135 FNSYSKDFEYIEGAEKNIRRYILNFLLEYLFITKKYPGEIMVKEVIE------NYFSDID 188 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 ++ + ++ K L LYL + + G + S EF Sbjct: 189 LNYIREFIKKIQEKIGKIISDEAYKILTLYLLIMIKRVREGKVLGE-IKNPVFITSSDEF 247 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 ++ I ++ AL E + + + ++ QL + +L+ Sbjct: 248 KIISVIISSLEKNALVKFSNQEIMAFSEYVLGSHSYNFDYSYYENWIQLEILVNKLIVDI 307 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + L + L HL A+ R I ++N + EE YP L + ++ Sbjct: 308 NSKIDTNILGDNILFEGLLNHLKPAIYRIKQGIKLENAIYEEVLDNYPELFLMIKDSMTK 367 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 V ++D+E V + F + + + K +I++ G +++ +++ + Sbjct: 368 LIHYLEVEINDDEIAFVTIHFKEAIDRRAEKALKNVIIVCGFGYGSSKLLKENIKKYFEV 427 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + + + F + LII P+ P+I+ + LT E++ Sbjct: 428 N-VVNTLPMHKFEEITDFNNIDLIITTV--PIKEEKIPVIHVNPILTKEDLEKLESY 481 >UniRef50_C9XLZ0 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLZ0_CLODC Length = 661 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 56/418 (13%), Positives = 142/418 (33%), Gaps = 21/418 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R +L L T+ +E + D+ + IL + L L + Sbjct: 94 SPDERINYVLDILTMTNNPITIDDLAEEICIGRTTLIKDLKK-ADRILAEYDLELKRKPN 152 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + G ++ RL + L + + + YD L+ Sbjct: 153 IGMILVGEEMDIRLLILDRLYENYIDVLENV-------------NQINLVKDYDIECLRD 199 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + ++ + + + + Y+ +L++ G + + E+ + ++ Sbjct: 200 ELKKLFKKEELYITEQVLRDVERYIIMSVLRNLNGYKFEKIDKRFEVIRCSDEYTLGLKL 259 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR--DAHQRDRQLRQSIKRLVNHFRELG 249 ++ + E +F+ + + P + + + +++ + + + E Sbjct: 260 KALLEKIFNIVLNEKETIFLTMPLIGRKAPSTKLALSSIKINDSVKEVVDEVTSFLLETS 319 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + F +++ L + L HL ALNR F I + N L +E Y + A E + Sbjct: 320 GIDFKEDKKLIENLEYHLYFALNRMRFNIRVKNPLLQEIKERYTFPYSVAKIAAMIIEEK 379 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + + + D E G +A+ FG++ + + + ++ ++ G I ++ ++ + Sbjct: 380 FDLKICDHEIGYIALHFGSYFEKNSRKVLNVNRVAVVCGTGLGTAQLIRIKIGKILGESV 439 Query: 368 NIKHMSVKAFL-QTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ-IRKML 423 + S + L+ L P+ + ++ I + Sbjct: 440 EVNTFSDIEAKANLDLLKYYDLVFTTVDFKTDL-DVPIFRVNALFNEESIKKEIENAI 496 >UniRef50_B6G219 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G219_9CLOT Length = 619 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 60/419 (14%), Positives = 144/419 (34%), Gaps = 10/419 (2%) Query: 9 SVLSAPQRRCQILLTLFQPGL-TATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 + +S +RR +IL L ++ SE V D+ E L + + L Sbjct: 108 ADISVEKRRIEILRDLLLKSDMKTSINKLSEKYFVSKTSIVNDLKYIEDEYLSKNNIRLN 167 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + + G+ ++ R C+ + + I + T KS Sbjct: 168 RTLN-GTYISGSEVDIRKCIANLIECISNEENYNIDER-TRIEKSTFDDLANVFGIESIR 225 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQF-NPLQRRWAESCLEFQ 186 ++A V L L ++ C+ + G + + ++ + + Sbjct: 226 FIEARVKELEVDLNCEICEPYYINLITHILICIRRIKEGNKIKVHDDVESNIIKEDFRYI 285 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 ++ + ++ + E ++ R+ + + + +++ Sbjct: 286 AVIKLIKKIEKEYSILLDNQEVSYIYKYIVSSRIENDIDFEDINEELYESIASEMIDFMS 345 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 EL N+ + L L H+ +NR ++ I I N L ++ + + T+ + Sbjct: 346 ELLNINLKMDNILKQGLIMHIKPMMNRLIYDIQIKNPLYDDILNHFNDIFILTKIVVFVI 405 Query: 307 ESEYGVH-LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 +Y + +SD+E + F A + + ND+ K+++++ + + +L++ Sbjct: 406 SEKYKMSNISDDEISYLTTYFQAAIERNNDI--KKVLIVCHSGYGTSQFLASKLKQTIPN 463 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + +S + + + II+ I LT I+KM++ Sbjct: 464 INIVDIISSRKLNK-ETVKNVDFIISTV--ETDFKGKEHIIVSALLTESDINNIKKMVD 519 >UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbiobacterium thermophilum RepID=Q67LZ9_SYMTH Length = 634 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 125/394 (31%), Gaps = 19/394 (4%) Query: 33 MATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLR 92 ++ ++ GV D+ T L L G+ + G + R + + Sbjct: 84 LSVLADRLGVGKSTVHTDL-ATAESWASRRGLALARGHA-GICLRGAEPHWRRAIVDLV- 140 Query: 93 RGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSR-RLQKRFESRDIHF 151 + + + L+ LV S RL Sbjct: 141 -----------GELADEAQLAMLLEEHPDAAPLQALLRPLVPRVSWGRLGDLLRELGAPE 189 Query: 152 LCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFM 211 L + + L + AG T ++P Q S + AQ I R + R +P E ++ Sbjct: 190 LSICVAVMLSRLQAGHTLSYSPDQVSRGLSSPWGREAQAICRALESRFGVRIPNTEAAWL 249 Query: 212 ALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQAL 271 AL R +P + +++ + ++ L HL Sbjct: 250 ALQLEATRAVNPAPGRDIVHPADLELAEQMAVLVETRLGIGLRQDREFLMGLALHLRPIA 309 Query: 272 NRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLM 331 R ++N L +E YP + + +G+ + + E G +A+ A L Sbjct: 310 ERLRRGEAVENPLLDEVQAKYPAACLAAQDVGRALSAIWGLTVPEPEIGYLAIHIAAALE 369 Query: 332 QENDLHE--KQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALI 389 +E + +++ + A + ++R L + +S + A L+ Sbjct: 370 REKLRRRTVPRALIVCSSGVGTSALLVTRIRSLLPEIQPGRVVSAFRVREVLAEDPHDLV 429 Query: 390 IAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +A +P P++ L ++R+ + Sbjct: 430 VATCQVP--PCGLPVVRVSPLLGEDDVARVRRTV 461 >UniRef50_B0MGK7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MGK7_9FIRM Length = 507 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 59/426 (13%), Positives = 140/426 (32%), Gaps = 10/426 (2%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 + +A +R ILL L + + + + L Sbjct: 78 LFEESKVEQTYTAKERNDLILLILLHENDYVKTQSLAIDLNTSTQTIRNSLHQLQN-FLE 136 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 +TL T ++G +++R L L R L F + I Sbjct: 137 NDDITLITKRSEGVILKGKEISKRHLLISILLRNIPLDNFFDWMKNKKYKSCAFINLLIQ 196 Query: 121 RNFYD-DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 ++ D + + ++ + + ++ L + +H + + L+ Sbjct: 197 WDYEDTLSVIYDFLDPLISKKRLNVSDKEFQEFLFLLCIFIKRHSL-ADEKGDELKLSVD 255 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSML--RVPDPLRDAHQRDRQLRQS 237 E ++ + I + + + E + + ++ R + + +QL Sbjct: 256 IPNPEQELYKSIKHLLEHKFHIKLYDTELNYFNWMINLYTGRTHYHVANDSSILKQL-DL 314 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 + +L+ E + +++ L + L H+ AL R + + N L ++ + +P+L Sbjct: 315 VTQLIARVEERFGFPYSEDENLAENLMLHINMALERIRSGMNVSNPLNDDIYQSHPKLYD 374 Query: 298 TTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQ 357 + + + V + D+E G + + F A + +++++ + + Sbjct: 375 IVKQSFIEVFNHTSVPVPDDEIGYIVIYFIASME-YLTKQSIEVLVVCASGMGSSKMLRS 433 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 +L K +S+ R LII+ + L I L +E Sbjct: 434 RLEREFAEIGVEKIISLHKLSDEDLSR-YDLIISTVPLDL--ADDKYICVSPLLNDRDKE 490 Query: 418 QIRKML 423 + RK + Sbjct: 491 ETRKRI 496 >UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQV6_ALIAD Length = 674 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 80/428 (18%), Positives = 146/428 (34%), Gaps = 19/428 (4%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 P A + ++ QR + L L +A ++ S D+++ LR Sbjct: 82 PVTARSAAVTPRQRAALLALWLLAEPGPLKLAYLGKVLDAAPASLSGDLNDLAP-WLRAR 140 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 LTL VEG+ + +R + + P + T Sbjct: 141 HLTLVRRQGFGVLVEGSEVARREAMADIVYEQI--SPYQLARMTTREGDLSHPVARWLVQ 198 Query: 123 FYDDTNLQALVNLCSRRLQK---RFESRDIHFLCLYLQYCLLQH-HAGITPQFNPLQRRW 178 F D L+A+ ++ L E D + LY L+ G+ + + Sbjct: 199 FVQDPVLRAVADVVEAVLGAAEPPVEEADRFEVWLYAVIQCLRAARRGLVRGTDLDEGAR 258 Query: 179 AESCLEFQVAQEIGRHWQRRALQP--VPPDEPLFMALLFSMLRVP-DPLRDAHQRDRQLR 235 +A+E+ + P E +MA + LRV D + Sbjct: 259 PGDV---ALAKELLSSVAKATGLPALSTEPEIRYMARHLAGLRVRLDDDFRLLPSNVTAL 315 Query: 236 QSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRL 295 R V ++ + F + L L HLA AL+R + I N L E YP L Sbjct: 316 DLAHRFVRAVEDITRLPFASDHLLVSGLAQHLAPALDRVRAGLPIRNPLLETVKARYPEL 375 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQI 355 +A + +G+ L DEE G +A+ GA + + + +++ + + Sbjct: 376 FAAAESASREVFAPHGLRLPDEEIGFLAMHLGASRERRLAEEKWRAVIVCPHGLSSARLL 435 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 ++R+ + S K+ A L+++ ++P P++ LT Sbjct: 436 ASRVRKELPEISVQEVASAKSAAHL----NADLVLSTVSLP--EADVPVVVVSPFLTEED 489 Query: 416 QEQIRKML 423 +R +L Sbjct: 490 LRAVRFVL 497 >UniRef50_C0D9V6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9V6_9CLOT Length = 642 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 52/424 (12%), Positives = 130/424 (30%), Gaps = 18/424 (4%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 + R I+ L + V D+ R + Y Sbjct: 79 IQKDQLPQTPGDRCIYIIHKLLFEARELNLTVLQGQIYVSGYSIENDLKRIRRMLEPYAN 138 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 L L ++G ++R L + + + Sbjct: 139 LKLVRSR-ECISLKGDEASKRRFYRDLLVAEVQENFLNLNT------------LAHLYRS 185 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 +D ++ + L L+ + + + + + Sbjct: 186 FDLIEVKDIFVEVLEEYDYAIHEALFPMLILHAGTSIERMNCSNYINM-EDNSQGLSDTI 244 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDA---HQRDRQLRQSIKR 240 E+Q+++ +R V E AL+ R + D + R ++ + Sbjct: 245 EYQISKTFFDRIGKRLHIQVHDGEIGMFALVIMGRRASNYTSDYVNLNGRWLNTKKLVAE 304 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 ++ L + F ++ L L H+ ++R + +++ +E R YP + Sbjct: 305 ALDKVFCLFGLDFREDADLIAGLKMHIHGLIDRLKTGVKLEDVFLDEIKRKYPLVFEMGI 364 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 + + G+ +SD ESG +A+ GA + N + +++ ++ A E+++ Sbjct: 365 YVGEFLKEKLGLSISDVESGFIALHLGAASERLNAARRYRAVMILPHNQSFSAMCEKKIS 424 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 ++ + + + LI+ + + L + +L + + + I Sbjct: 425 DMFRERMEVVRTFSYFEEEIVREMDPDLILCTFPIEHRL-DVETVNINLFVDSQTESNIL 483 Query: 421 KMLE 424 + + Sbjct: 484 QAVN 487 Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 83/317 (26%), Gaps = 49/317 (15%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 +R+ Q+L L + T +E+ V D D+ R R + + Sbjct: 2 QNKRQEQLLALLAERRDYMTSRQLAEILQVSDRTIRSDVEAINR---RSSPPPIESNVRQ 58 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 YR+ L R I + Sbjct: 59 GYRLN-PEAA-----------VLPPASELDAGIQKDQLPQTPGDRCIYIIHKLLFEARE- 105 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 +NL + Q I ++ L + + ++ + Sbjct: 106 LNLTVLQGQIYVSGYSIENDLKRIRRMLEPYANLKLVRSREC------------ISLKGD 153 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 +RR + + E L + L D + +K + E + Sbjct: 154 EASKRRFYRDLLVAEVQENFLNLNTLAHLYRSFDLIE--------VKDIFVEVLEEYDYA 205 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGI---DNT--LPEEFARLYPRLVRTTRAALAGFE 307 + + L L H ++ R + I DN+ L + + ++ Sbjct: 206 IH--EALFPMLILHAGTSIERMNCSNYINMEDNSQGLSDTI------EYQISKTFFDRIG 257 Query: 308 SEYGVHLSDEESGLVAV 324 + + D E G+ A+ Sbjct: 258 KRLHIQVHDGEIGMFAL 274 >UniRef50_B6FXT7 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FXT7_9CLOT Length = 696 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 55/420 (13%), Positives = 135/420 (32%), Gaps = 24/420 (5%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 LS +R+ I + L + T++ +E+ V D++ ++ L+ LT+ Sbjct: 80 YTYKLSKEERKIMIAILLIESSEYITLSKIAEILYVSRATIINDLNSV-KDYLKSGNLTV 138 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + + RVEG ++R L + + L + Sbjct: 139 LSHANKGLRVEGFESDKRNFLLKAILSDKDYKNLIYSVNKENVLMDS-----------EM 187 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + ++N + + L Y+ + + G + + Sbjct: 188 DKIHKIINEQEHYHETYLTDSSYNKLKNYIMISISRLRRGEMI-----EHQDIICEETHS 242 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV-PDPLRDAHQRDRQLRQSIKRLVNHF 245 +A++I ++ + DE +++ + L+ ++++ +++ ++ V Sbjct: 243 MAKDILKYISQYCNVMTTADEEAYLSKFLNGLKYLKKENENSNESMVKIQFITRQFVEGV 302 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + D+ L HL + RS N +E P +V T + Sbjct: 303 SHDLKINLNDDYDFYLNLSNHLES-IFRSKNYNFPQNEFIDEVVSKNPDIVAATNKNIDV 361 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTL 364 E +SD E + + A + ++ +IL+ ++ +L+ Sbjct: 362 IEKYAQRKISDIEIAYITIHICAAIERKKKQEIAFHVILVCNGGVGTSQLLQAKLKTHYN 421 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + +S + + A L+I+ PL + T ++ ++ Sbjct: 422 F-QIVDIVSAHD-EKNIINKNADLVISTV--PLKNIDIDYVIVSPLFTDEDYIRVGSKID 477 >UniRef50_B8DAX2 PTS system IIA 2 domain protein n=22 Tax=Listeria RepID=B8DAX2_LISMH Length = 689 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 62/418 (14%), Positives = 145/418 (34%), Gaps = 25/418 (5%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 + S +R I+L L ++ F V + D+ + L L + Sbjct: 84 YIPSEKERASLIILMLTTGSEELSLNHFISELEVSKNTVLRDLKLVQKT-LEKFNLEVKY 142 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 Y ++G NQR L + E + + + Sbjct: 143 SRMRGYLIDGDEWNQRTALIYAAEHIIESFGG-----------EEYLQDFMQVDEARIKE 191 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPL-QRRWAESCLEFQV 187 L+ + L F + L L+ + G T + L E+ Sbjct: 192 LREKLEQVEHHLNLHFIDNKMQILPYILEAVFRRMKKGQTITTSFLIDYNELSDTREYGA 251 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A+ +P E +++ L V + +LR +++++++ F + Sbjct: 252 AEIFIEE-----EPNMPEAERMYITLQLLTSNVLPKQYLKSEETHKLRLALEQVLSEFEK 306 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 ++ D++ L ++L+ H+ A R + + D ++ ++ + + + + +LA E Sbjct: 307 KACIQLVDKESLLEKLFAHIKPAYYRIKYHLTTDYSILDKIDQEFQAVHYIVKESLAPLE 366 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 G + + ES + + G L++ E + +++ N +E+ LR L Sbjct: 367 RFIGSKVPENESIFITLFIGGHLIESTEKLQTRLKAVVVCPNGLSISRLMEKTLRSLFPE 426 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + MS++ F QT G ++ + + + + ++ ++R+ + Sbjct: 427 IFFYQAMSIREFEQTKL--GYDIVFSAVPLSTDKK---FFLINQLMDGKERLELRRRV 479 >UniRef50_A8RTN9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTN9_9CLOT Length = 639 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 47/420 (11%), Positives = 125/420 (29%), Gaps = 18/420 (4%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 + R ++ L + V D+ + + Y L L Sbjct: 80 DIPQTPGARCAYMIQKLLFEVKELNLTMLQSQIYVSGYSIDNDLKRIRKMLEPYSGLKLV 139 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 ++G ++R L + + + ++ Sbjct: 140 RN-KECISLKGDEASKRRFYRDLLVAEVQENFLNLNT------------LAHLYRSFNLI 186 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++ + L L+ + + + + E +E+Q+ Sbjct: 187 EVKDIFVDVLEEYDYSIHESMFPMLILHAGTSIERMNCANYINM-EEGMQGLEDTIEYQI 245 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR---DAHQRDRQLRQSIKRLVNH 244 AQ +R V E AL+ R + + + + ++ + + Sbjct: 246 AQTFFDRISKRLHITVHDGEVGMFALVIMGRRASNYTSDFVNYNGKWMNTKKLVAEALEQ 305 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 L + F + L L H + R + +++ EE R YP + L Sbjct: 306 VYALFGLDFRQDADLVAGLKMHFHGLIERVKNQVRMEDVFVEEIKRKYPLVFEMGIYVLE 365 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 E +SD ES +A+ GA + N + + + +++ ++ +++ ++ Sbjct: 366 FLEQRLERPISDVESCYIALHLGAASERMNSVRKYRAVMILPHNQSFSDMCVKKISDMFR 425 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + + + L+++ + + + +L + + + +I + + Sbjct: 426 ERMEVVKAFGYFEEDEVSALDPDLLLSTFPLEH-GLDVETVSINLFVDSETESKILQAIN 484 >UniRef50_C9XLJ8 Putative transcription antiterminator n=7 Tax=Clostridium difficile RepID=C9XLJ8_CLODC Length = 679 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 63/418 (15%), Positives = 153/418 (36%), Gaps = 23/418 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S R IL L + T+ + ++ V D + +L + L L + Sbjct: 117 SKEDRVEFILNYLIELDGFITLDSLADEMCVGRTTLVNDFQYVEK-VLASYNLNLIKKQN 175 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ G L+ RL + + L + R F S++ +K E + NL+ Sbjct: 176 TGMKLNGNELDIRLFILNQLYKNSRKD--FSNSKYFKGIKKE-----------EIINLEE 222 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + + + + Y+ + + + ++ +S E+ +A+EI Sbjct: 223 KLLTLFKENNFYVTDEMLREVINYIVVLVYRVKEEKKVKDYDVKFDLLKSYDEYFIAREI 282 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPL--RDAHQRDRQLRQSIKRLVNHFRELG 249 + +E +++ + P ++ + + + + ++ + N Sbjct: 283 KHIISGMFECTLNDEEIIYLTIPLVSGNAPASECALNSSRISKNIDELMENIFNQIYVDM 342 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + +++ L L HL+ LNR LF I + N L EE + Y + + A E + Sbjct: 343 GIFINEDE-LRVGLGYHLSFTLNRLLFNIKLKNVLLEEIKQNYILPFKLAQIAGKVIEKK 401 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 Y + +S++E G +A+ F +L + + K+I ++ ++ ++ +L Sbjct: 402 YNLEVSEDEIGYIAIHFSGYLERNSSRFYSIKKIAIICSTGLGTAKLLKIRVEKLIGNNP 461 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 I +S ++ + + ++ + + ++R+ L++ Sbjct: 462 KIDTLSSFNLRNIN-LDEYDIVFTTIDLDTSNINTIVLKINTIF---DENKLREQLKT 515 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 30/310 (9%), Positives = 83/310 (26%), Gaps = 38/310 (12%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 R+ +L + ++ + + V I + +++ + + Y Sbjct: 33 DRKIFKILIMCSKKEFVSINSIANELNVTTRSVRTYIKQLNKDLGNDIAV-IKYIKGQGY 91 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 ++E + R+ + + + L + + V Sbjct: 92 KLEIKDEQILNKIIDMNRKN--VFSLNSKEDRVEFILNYLIELDGFITLDSLAD-EMCVG 148 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 + ++ + + L L + + + G+ N L R ++ +++ + Sbjct: 149 RTTLVNDFQYVEKVLASYNLNL---IKKQNTGMKLNGNELDIRLFILNQLYKNSRKDFSN 205 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + +E + + L + + R++ I LV +E V Sbjct: 206 SKYFKGIK--KEEIINLEEKLLTLFKENNFYVTDEMLREVINYIVVLVYRVKEEKKV--- 260 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 + + L + Y R + L Sbjct: 261 KDYDVKFDLL-------------------------KSY-DEYFIAREIKHIISGMFECTL 294 Query: 315 SDEESGLVAV 324 +DEE + + Sbjct: 295 NDEEIIYLTI 304 >UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax=Lactobacillus plantarum RepID=C6VLU3_LACPJ Length = 634 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 58/424 (13%), Positives = 138/424 (32%), Gaps = 25/424 (5%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 P L S S +RR I+ L Q + ++ + D++ + Sbjct: 79 FPILKDNS-QSEQERRISIMTFLTQQSKPVLLDDIADHFFISRSTLERDLNVLKMD---- 133 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGF--RLCPSFITSQFTPALKSELKRRGI 119 + L LT + + + R + L+ + + + T + T K + Sbjct: 134 YGLKLTATT-EGVKFNSSESDVRRVIGQLLQSYWGQEIKQNQQTGKMTRTFKVPQSLKRY 192 Query: 120 ARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 +Q ++N + L+ L ++ + + G Q Sbjct: 193 VNKQT-LNQMQKVLNKFVKILKVDVNEYQYESLLIHTTIAIQRIKNGEFITQTTTQNFDT 251 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK 239 + ++ + +P +E ++ + + + + R + ++I Sbjct: 252 MAIS--PSTNKLVKMLIVAFKCEIPDEEIAYLNMHVAAI---EDGYIDLDRSGLVERTIV 306 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 + + L L HL AL R I I N + +P Sbjct: 307 DWLRSVLTDY------DNQLLRNLTLHLRPALVRIKNGISITNPYCNQVKTYFPVAFDQA 360 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREAQIEQQ 358 A E +Y + L+++E +A+ F +++ + L ++ ++ ++Q+ Sbjct: 361 LALAMAIEKQYHLQLTEDEIAYLALHFESFIERRKVLKPDVELAIVCSTGYGTAELLKQR 420 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 + + + +SV + + A +II+ +PL + +I L + Sbjct: 421 VMDKLPDVQIVGTLSVNELMTSTVT--ADIIIST--IPLKMSGTRVIQVSPFLNDQELSL 476 Query: 419 IRKM 422 + K+ Sbjct: 477 LEKL 480 >UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 Tax=Anaerococcus RepID=C2BGB6_9FIRM Length = 698 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 55/417 (13%), Positives = 131/417 (31%), Gaps = 14/417 (3%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 + R IL L T E+ V + DI + L+ + L + Sbjct: 128 DQIYDKKGREKYILENLLLENKALTFDDLLEILFVSESTLQRDIYSLRNK-LKDYGLDIV 186 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + + G L +R + + F +S ++ + +EL+ + Sbjct: 187 KDDNSYLSISGKELEKRHFILDF----------FFSSIYSNSFINELEDLNLFHKATISQ 236 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 L L++ R I L ++ + + E Sbjct: 237 LLIILLDEI-REYGISVNDYAIQNLVIHFALVIERVKINCLIDNYDKDIAKGEGDEFLDF 295 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A+ + R + +P +E ++ L + + + + L+ + + Sbjct: 296 AKSVIRRISKSFAIDLPIEEKKYIYLQLLSK--TKLSSENSIKSFKDYNQVIDLLRYLSK 353 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 N+ D+ + HL NR + I N L ++ Y + F Sbjct: 354 KLNINLLDDNVFMNNFIEHLKALENRVASGLYISNPLTDKIKTQYTSYFDLVVDSFKKFS 413 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + ++D+E + + + L + + ++++ + ++ +++ + Sbjct: 414 IFENMDITDDERSYLVIYILSALERNKFNKKINVLVVCASGFSTGLMLKNRIQNEYTNTI 473 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 NIK++ + LII+ + + + P + + L I K +E Sbjct: 474 NIKNVIGYYEITPKNLDDVDLIISSVDLEGLVIAVPSVKVSVFLDEDDCALIDKEVE 530 >UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMM5_SEBTE Length = 655 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 53/422 (12%), Positives = 132/422 (31%), Gaps = 16/422 (3%) Query: 11 LSAPQRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 +S RR +IL ++ SE + D+ I + + L L Sbjct: 91 MSTEYRRQKILTEFLSNSPKAYSIQQLSEKYYISRASIVNDLKYIEDRI-KQYDLRLERN 149 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITS-QFTPALKSELKRRGIARNFYDDTN 128 + + G+ +N R + + + + L + Sbjct: 150 KN-GTMLTGSEMNIRKAILGIINELMTANHENKNGLRESRLNDENLYELFGQFGREEVEA 208 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE-SCLEFQV 187 + ++ ++L + ++ + + G N ++R + + + Sbjct: 209 VAKILKDTEQKLNYTMGEIYYINMITHILILIKRLRNGNILYENKMRRDIRKTDKRIYTI 268 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP------DPLRDAHQRDRQLRQSIKRL 241 +QE+ VP +E F+ + D + + + + Sbjct: 269 SQEMSGKITETFKIEVPEEETYFIYQYLISSGMEIINAGTDTSELLLDTSPVIMEIAEEI 328 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 + E+ + + ++ L + L HL +NR + I I N + E+ + + + Sbjct: 329 IRKISEIVDFKLTPDKQLYESLILHLKAMMNRLKYNISIKNPILEDIKKEFSAIYGLVGL 388 Query: 302 A-LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 L E +S +E G + F A + Q + +K+++++ + + ++R Sbjct: 389 VTLDTLEKYNIRAISPDEIGYLTFYFQAAVEQN--MKQKRVLVVCSSGVGSSHLLRGRIR 446 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 +S + LII+ + + P+ Y + Sbjct: 447 HSFPEWDIADVISTGRLKAGYDLKDIDLIIST--INISGIDMPIAYVTALFNEADVRNVT 504 Query: 421 KM 422 ++ Sbjct: 505 EI 506 Score = 70.6 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 31/308 (10%), Positives = 89/308 (28%), Gaps = 23/308 (7%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R+ +I++ L G + +E V + ++ E L+ + L + Sbjct: 7 RQKEIIIYLMDKGDYIPVKNIAENIRVSEKTVYRELKAIE-EYLKSRYIFLEKRPGTGIK 65 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 + T + F T + +E + + ++ Sbjct: 66 LNITKEQKMKLNFELHAGKENKNDYMSTEYRRQKILTEFLSNSPKAYSIQQLSEKYYISR 125 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 S ++ I L L ++ G + + R A + ++ + Sbjct: 126 ASIVNDLKYIEDRIKQYDLRL----ERNKNGTMLTGSEMNIRKAILGIINELMTANHENK 181 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + + + F R+ +++ +++ + N Sbjct: 182 NGLRESRLNDENLYELFGQFG---------------REEVEAVAKILKDTEQKLNYTMG- 225 Query: 256 EQGLCDQLYTHLAQALNRSLF-AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHL 314 + + TH+ + R I +N + + + R+ ++ + + + Sbjct: 226 -EIYYINMITHILILIKRLRNGNILYENKMRRDIRKTDKRIYTISQEMSGKITETFKIEV 284 Query: 315 SDEESGLV 322 +EE+ + Sbjct: 285 PEEETYFI 292 >UniRef50_C8ZWZ8 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZWZ8_ENTGA Length = 640 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 67/415 (16%), Positives = 147/415 (35%), Gaps = 24/415 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + +R I L L TM SE V DI + + + LTL + Sbjct: 86 NPNERIKNIELLLLFHEEYITMQQISEWLEVSLSTVKADIKQVE-LFCKDYGLTLFSKAH 144 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ GT +R + + +R +R +D+ L++ Sbjct: 145 YGLKIVGTEEKKRQAILYLIRNIIHTPV-------------LTERYKAFHFVFDEEALRS 191 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ ++ Q + + +++ + + T + R A + + +++ Sbjct: 192 CLSEKLQQHQLKASDIVFENIIQHIRLLVFRITQNNTLTNDERTVRTATDKYD-LLTEDL 250 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + + E ++ R ++Q QL+Q+I++ + + Sbjct: 251 VSYLETAYPITFSTMEKNYLHEQLRGKFSVLDDRTSNQ---QLKQAIEKTLELVDLRYHT 307 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 +F +Q L + L H+A L R +DN + ++ Y + ++ + Sbjct: 308 QFRTDQELGNALLMHVAPLLQRLYTGHQLDNPIIDDIYTQYANVFNVAMVFISELNKDLD 367 Query: 312 VHLSDEESGLVAVIFGAWLMQENDL---HEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 +S +E G VA+ F A L ++ + K+I ++ ++ L L Sbjct: 368 ADISKDEIGYVAIYFAASLEKQANQLIDDYKKIAVICSTGGGASYLLKVNLERLFSNAE- 426 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + ++ Q + L+I+ + F+ P+IYT L + +I K L Sbjct: 427 VTTFALNEVDQID--KSFDLLISTVPLDQEQFAIPIIYTKTILNRAEINKIEKDL 479 >UniRef50_C3RLU7 Predicted protein n=2 Tax=Bacteria RepID=C3RLU7_9MOLU Length = 640 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 69/425 (16%), Positives = 146/425 (34%), Gaps = 17/425 (4%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 S+ S +R I L + E + + S +I + + Sbjct: 78 FNDTNDFSIYSVTEREEWIQKYLIENNGWVKAEALCEKLFISQSVLSQNIKSVRKAFQK- 136 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 + L L RVEG N+RLCL F +QF + + Sbjct: 137 YDLILLQKPHYGMRVEGREFNKRLCLAQIYITHIDQREGFPGTQFNNDELQLILK----- 191 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 ++ +V+ R Q + + + L + GI + Sbjct: 192 -------IEDIVDRILTRYQISMSEVSVQNFIIDIYISLKRIKKGIFLKSTDKMVIDIAR 244 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRV---PDPLRDAHQRDRQLRQSI 238 + VA E+ + + E + +++ + R+ D D + + + Sbjct: 245 WTDSIVAVELAKLINDELTIEMKDQEIVSLSIHLAAKRIICHFDESIHRIIEDFDVNKLV 304 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 ++N+ + ++ L QL HL RS + + + N L ++ + + Sbjct: 305 NNMINNINCKWGIDLTQDEELKSQLVLHLIPLEVRSRYNVVLHNPLIDKIKQQNIFAYQM 364 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQ 358 A F +G LS++E G +A+ L++ ++K I++++G + Q Sbjct: 365 AVTACDQFSDYHGNRLSEDEMGYIALHMNLALLRTQIKNKKNILVVSGLGRGTAHTLAYQ 424 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 ++E+ +N + L L+I+ + FS P I + + + +++ Sbjct: 425 IKEMYGKYINEVKTADYIELNNYDFTNINLLISSIPLRRD-FSVPSIEVNYFFSDNDKKR 483 Query: 419 IRKML 423 I +L Sbjct: 484 IETIL 488 >UniRef50_C7UBV6 PRD domain/PTS system IIA domain-containing protein n=3 Tax=Enterococcus faecalis RepID=C7UBV6_ENTFA Length = 652 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 58/407 (14%), Positives = 140/407 (34%), Gaps = 16/407 (3%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R+ ++ L + S+ V S D+ + I +T+ + + Sbjct: 95 ERQIKMAEYLLLRNKKVSYQLLSDEFLVSRTSISNDLDQIQTVIEGS-SVTIRSD-NNGT 152 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 +V G + + + S T + + + + D + + Sbjct: 153 KVNGNESEIQKAIKQYAYFIID------KSDLTNSYRVQFPSLLFSFLPKDIIKKVSGLL 206 Query: 135 LCSRRLQK-RFESRDIHFLCLYLQYCLLQHHAGITPQF-NPLQRRWAESCLEFQVAQEIG 192 + + L L + +L+ G ++ + ES F +A E+ Sbjct: 207 QTNDHFNIDKLSDDHFQSLVLSISIFVLRLQEGFHIEYQDNFLFENVESLKTFFLANELV 266 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + + + ++ + LRD + ++ +++++ + V Sbjct: 267 ENLELDNSIKLDSNDFEYFNRQLVAHGFEPRLRDLAIQ-KEYDAVVRKMIQKMSDSIQVD 325 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 ++ L + HL + RS + + N L EE R Y L TT LAG E E + Sbjct: 326 LTRDEKLYMNILYHLVSMIYRSKLNVPVSNPLLEEIKREYSVLYSTTWLILAGIEKELDI 385 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 L+D+E + + F + + + +I+++ I +L+ + ++ + Sbjct: 386 RLTDDEVAFMMIHFQGAIDRLSANR--KILIVCPTGIGTSELIANRLKRVFSPQDIVEVV 443 Query: 373 SVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 S++ + L+I+ L P+ Y ++ +++ Sbjct: 444 SLRTLYKRD-LNKIDLVISSV--QLEKIDVPVTYVSPLMSKQDLKKV 487 Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 34/316 (10%), Positives = 86/316 (27%), Gaps = 44/316 (13%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R+ ++L L + + FS++ + D DI E + L+ ++ + Sbjct: 6 KRQHKLLRLLLEQKDFLPVNHFSKILSISDRTLYKDIDELNKA-LKKRKIEILKRQGKGI 64 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + S +++ + E + + ++ Sbjct: 65 FL---------------------SKSDLSNDEILKIFGEASTQIDFNQLPLERQIKMAEY 103 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYC-----LLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 L R + ++ FL + G + + E Sbjct: 104 LLLRNKKVSYQLLSDEFLVSRTSISNDLDQIQTVIEGSSVTIRSDNNGTKVNGNE----S 159 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 EI + ++ A + + + RV P + + + + L+ + Sbjct: 160 EIQKAIKQYAYFIIDKSDLT------NSYRVQFPSLLFSFLPKDIIKKVSGLLQT-NDHF 212 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGID---NTLPEEFARLYPRLVRTTRAALAGF 306 N+ + L ++ + R I+ N L E + + Sbjct: 213 NIDKLSDDHF-QSLVLSISIFVLRLQEGFHIEYQDNFLFENVES--LKTFFLANELVENL 269 Query: 307 ESEYGVHLSDEESGLV 322 E + + L + Sbjct: 270 ELDNSIKLDSNDFEYF 285 >UniRef50_C9XMT3 Putative transcriptional antiterminator n=7 Tax=Clostridium difficile RepID=C9XMT3_CLODC Length = 642 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 67/420 (15%), Positives = 138/420 (32%), Gaps = 18/420 (4%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + S +R IL + + + V DI IL + L Sbjct: 85 SSEIPDSPIERNQYILKYILYNNTYIKLEDLANSLYVSKFTILNDIKRIKP-ILSKYNLI 143 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 L + +VEG ++ R C+ + + I F + R N D Sbjct: 144 LVSKPYYGVKVEGKEIDIRRCISN----------NMINRNFENYIIGITDREIELFNNVD 193 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 LQ +V + F ++ ++L + + G + Sbjct: 194 LIELQRVVLSEINKFNINFLDFNLKNFIIHLAITISRILDGYCLDN--VLDVVLTDFQSN 251 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 + I + + + + + +++ F +++ D ++ + ++ ++ Sbjct: 252 TTVENIFNYIESKYTIIISKADRVYLYNHFITKSSLLDN-VSNRVDTKIIEYVEEILEVI 310 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 ++ L D L H LN + + N L YP T A+ Sbjct: 311 NNQYTFDLRNDSVLFDDLVLHFKSILNSKSYNLNKVNPLINTIKSNYPLAFEITLNAIEK 370 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 L+++E G V++ GA + + +N++ K ++L+ G+ +E QL ++ Sbjct: 371 VFKNSIYSLTEDEIGYVSLHIGAGIERFFQNNIKCKNVVLVCGSGYGSSRLLEVQLNKVF 430 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +NI +II+ + S P++ DL L E I K + Sbjct: 431 HDKINILQCLSFNQFLASELSDVDIIISTIPLNHD--SIPIVLVDLKLLKKDIENISKSI 488 >UniRef50_C3RP75 Predicted protein n=2 Tax=Bacteria RepID=C3RP75_9MOLU Length = 699 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 52/419 (12%), Positives = 132/419 (31%), Gaps = 7/419 (1%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 +S +R+C IL++++ T F++ V DI +E + ++ Sbjct: 83 YVYAISPFERKCYILVSMWCCSEPLTSQYFADEMNVSKSSIDKDILSIRQEYEG-YDFSI 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 +EG + R C F + + + R + ++ Sbjct: 142 NVKTGKGSYIEGDERDIRSCFFRVIEKNIDFNKFMHFQYTPITFIEKNIYRMVFDKYWKI 201 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + ++N +K+ +C++L L + G + + Sbjct: 202 --IIKVMNDFESHSEKKLTYLSYKDICIHLAVSLTRIELGYDIILHQDYLIEISKTEGYH 259 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 AQ I + + E + +L + R R ++ L Sbjct: 260 DAQFICSQIMQALNIKMSQSEVAIITILLNSARYTTLKRYVIYDWANIQMIATTLAFKVG 319 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 E NV F ++ L + L HL + + + + N + Y + + Sbjct: 320 EKLNVNFSRDEELINSLTLHLGPTVFKLQNQVPVVNPSLTVIKKNYHEVFIALLETIDEL 379 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQEND-LHEKQIILLTGNDSEREAQIEQQLRELTLL 365 + + +++ + + F A L ++N ++++ + + +++ + Sbjct: 380 CYKELKGIKEDDIAFLTLHFCAALERKNRFKDVYNVVIVCVHGFGTASLMKEMICSRFKN 439 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + K ++ + L II+ + + ++ ++ L I +E Sbjct: 440 IIVKKTVTEERILNID-LSNIDFIISSIDLQIMQCL--VVKVNVILKESDYRLIENAME 495 >UniRef50_B9Y3S8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3S8_9FIRM Length = 631 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 63/404 (15%), Positives = 132/404 (32%), Gaps = 19/404 (4%) Query: 21 LLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTV 80 +L T + + + + + + E + L+ + + L Y + G Sbjct: 95 ILKSLLVNPTISQSEMIDQLFISRSTLNKLMVEVKKT-LKENGILLANRPYYGYYIVGDE 153 Query: 81 LNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRL 140 ++ R + L F+T+ F A L R + + + + + Sbjct: 154 VDIRNFMVKTL---------FVTASFLSAEPELLARMP-----FALSRSVSQICQILKAE 199 Query: 141 QKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRAL 200 E +H+ YL L + G + + + A I + Sbjct: 200 GIPPEEDLVHYCLKYLMVSLCRIQGGAQLRLSLPSLSETLQPAVQRAASAILDLFCG--P 257 Query: 201 QPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLC 260 + +E L+ A R P P +A LR+ + ++N+ L V F + L Sbjct: 258 LVINDEERLYFAS-IIGNRTPLPPDEALASADWLRELVDDMLNNILNLCKVDFRSDAKLR 316 Query: 261 DQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESG 320 L THL + +R + N L Y + + ++ + ++D++ G Sbjct: 317 KALMTHLYASFSRYYLKATLPNPLMTLIKSQYVEAYNYSLIGCEMLKEKHHLAINDDDIG 376 Query: 321 LVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQT 380 +A+ F A L ++ + +++ G+ I +L + ++ Sbjct: 377 YIALHFAAALEKDRAAMLCRTVIVCGSGIGTSELIRLRLSRKIPQLVIQDVLASYELPDF 436 Query: 381 GAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 A II +P P I +T+ +I M+ Sbjct: 437 SAI-DVDFIITTVPLPAGNNPLPSILISPMVTSEDIHKIEFMIH 479 >UniRef50_B0MBD2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MBD2_9FIRM Length = 692 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 49/420 (11%), Positives = 138/420 (32%), Gaps = 12/420 (2%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 V+ +R +LL L + G D+ + + IL + + L + Sbjct: 86 QVVDPKERMYLVLLELLHQDDFMKTEALAIDMGTSLPTIRNDLKKIEK-ILPEYNIKLIS 144 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLC-PSFITSQFTPALKSELKRRGIARNFYDDT 127 + G + + + + + + + + +++ Sbjct: 145 KKGDGICLSGEQVARDHLMVNIIMKNTDVDVIVHWLAGNVRQFHPFMQKLDEYGYMDLFQ 204 Query: 128 NLQALVNLCSRRL---QKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE 184 + ++ S +L + ++ L + + + +H G +++ + Sbjct: 205 TCEKILRDISHKLIQKNYQILDQNYAELVMLVSLLIRRHKIGNR-KYSTDFTVEQVDKNQ 263 Query: 185 FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNH 244 +V + R +++ + E ++ + + + ++ L+ I+ V Sbjct: 264 KKVVAALIRMLEKKYSISLDEAEKEYLLWVMDISVGKRNNENVFVKNFVLKPKIEEFVEL 323 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + + L D L TH+ +AL R+ + I N + + + Y +L + + Sbjct: 324 VEGRMGITLSQDTKLMDGLLTHIDKALVRTRSGMSISNPIIRDIEKDYSQLFSIIKDTVR 383 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 + D+E G + + F L +++++ + + +L Sbjct: 384 KV--FPDDYFPDDEIGYLVLYFAVSLDNI-TKKTFRVLVVCSSGMGSSKMLASRLEREIP 440 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 K +S+ + LI++ +PL L + L ++ E +++ + Sbjct: 441 EIYVRKIVSLVGLGEED-LNDYDLILST--IPLYLKDREYLKVSPLLNDNELEIVKEKIR 497 >UniRef50_C5RM48 Transcriptional antiterminator, BglG n=1 Tax=Clostridium cellulovorans 743B RepID=C5RM48_CLOCL Length = 686 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 58/424 (13%), Positives = 134/424 (31%), Gaps = 6/424 (1%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + ++ + + QR+ I L + FS V SLD+ + ++ Sbjct: 79 LNSVPVQWLFTKEQRQIIIACELLVSKEPLKASYFSHKFNVVMGSISLDLDSIEKVLITK 138 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 L L + G+ N+R L F+ ++ + + S +K Sbjct: 139 -NLCLIKKRSYGISIGGSEWNKRNAFVDLLFE-FKTFDDLLSYFYNRKIDSVVKSFFEII 196 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 NL V + + + + + + + Sbjct: 197 FGSKTINLVKDVLNEDKFQSLKINDVKYLSFFIQVLLAIKKTENSDNILLPQKVKEDIRV 256 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKR 240 ++++ + + ++R +P DE ++ L S + ++ + D ++ Sbjct: 257 LVDYESIKFLDESLKQR-GIVLPEDELGYLYLYLSDYKYLYKKSGNSTESDIDYGDVVRE 315 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 LV + N + L L H Q + + N L E Y +L Sbjct: 316 LVTEVSKKINSNLSIDDQLIKDLTQHFKQTFYTLNLGVKVINPLINEIEEHYSQLFEIIN 375 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL-HEKQIILLTGNDSEREAQIEQQL 359 S Y + + EE G + + + ++ + + +++++ I ++ Sbjct: 376 EKCKLIFSRYNLKIPREEVGYITMHIEVAIQRQQSILKKIKVLIVCSGGIATSRIINNKI 435 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 + L +I S+ + LI+A + + + +I LT E+I Sbjct: 436 KSLFPDIEDITIGSLHDINDSNLENKYDLILATVPV-MSNEASNIIEVSPFLTQENIEKI 494 Query: 420 RKML 423 + Sbjct: 495 SNFI 498 >UniRef50_B0MEI2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI2_9FIRM Length = 642 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 65/419 (15%), Positives = 129/419 (30%), Gaps = 27/419 (6%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 V S +R I+ L T+ +E V + D+ E L+ H++ L Sbjct: 79 EIKVHSREERV-IIITVLLMISEKVTIEQLAEKLQVSKNTVVQDLRPAE-EFLKKHEVRL 136 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 ++G R LF+ + I D Sbjct: 137 IKKSYYGMSLKGEEEQIRNTLFNLYIKTASEGSLNILHILKD------------HAEVDP 184 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + ++ + RF I L + L + G + L Sbjct: 185 EAGRNMIRRVEAAMGIRFADESIGELESMILASLCRIRCGFHVRGRTLDDADGVCRE--- 241 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH-QRDRQLRQSIKRLVNHF 245 V + + +LF + D + D ++ Q+ ++L+ F Sbjct: 242 ------AILSGLPGFQVTKGDLSYFVMLFQSTKRMDGESLENWDEDGRVMQATEQLIRKF 295 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + + + Q+ HL A+ R I I N L E+ + + T L G Sbjct: 296 CSDLKISSEIDPEIQRQIMMHLKVAVFRLKNKIKIKNPLMEDIKYSHSFMYELTERLLKG 355 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTL 364 E GV D E + F + L+ +++L+ G + ++Q++ E Sbjct: 356 QEEMLGVVFPDAEIAYTTMYFEVLFQENFSLNLSPEVVLVCGGGTATAVLLKQRISEYFP 415 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K V + II+ + L +I+ + L + ++++ ++ Sbjct: 416 ELRVRKICRVSDVEEETERNRPDFIISTVPLSLRNQQ--VIHVNPLLNSPDIDRVKNII 472 >UniRef50_B0MH65 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MH65_9FIRM Length = 693 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 59/426 (13%), Positives = 141/426 (33%), Gaps = 23/426 (5%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 + L +R+ + L T++ ++ V D+ + R Sbjct: 78 LFRDNFYSYKLEKNERKIFMATLLICENDYRTLSDLADCMYVSRSTVIQDLESLKK-FFR 136 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 H+L + + + +EG N+RL LF ++ + P + + Sbjct: 137 KHRLYVVSHSNKGLMLEGEEKNKRLLLFSMVKSSESVYRE------APVFERLIGSLKEE 190 Query: 121 --RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + D ++ ++NL + L +L L + I + + + Sbjct: 191 CRVDMEDLKTMEKVINLAEHFSGRFLTDTSFTDLKYFLLLSLYRMRLKIYAEQDGKKNSK 250 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 +++A I + A V DE F+ + + +R +Q +++ Sbjct: 251 ------YEMAGYILKQLSDFAGIEVVEDEVKFLGRILNEMRYIKKTTS-NQEIVKMQVIT 303 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 + + H ++ + + L HL + ++ + ++ E YP++ + Sbjct: 304 RTFIEHVSIDIDLNLQGDYIFYENLINHLESMFSSAIRDNTVS-SVVTEVLERYPKIQKA 362 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL-HEKQIILLTGNDSEREAQIEQ 357 + + E G L++ E + V A + + + +IL+ + Sbjct: 363 VQNNVFVLEDYIGRKLNEVEISYIVVHICAAIERNRNSAERYSVILVCNGGIGTSQLLLA 422 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 +L++ ++ + L+ A A +I++ + L I D L Sbjct: 423 RLKKYFNF--HVADIIPAHDLKNVAVDEADVILSTVALDTDLE---YIQVDPLLNDGDCI 477 Query: 418 QIRKML 423 + K L Sbjct: 478 NVGKKL 483 >UniRef50_D1P1R2 Transcription antiterminator, BglG family n=5 Tax=Enterobacteriaceae RepID=D1P1R2_9ENTR Length = 645 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 64/425 (15%), Positives = 138/425 (32%), Gaps = 21/425 (4%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 ++ +R +LL L L + +E V D+ RE L Sbjct: 79 QNDNNSNIPRTSKERIDALLLKLLMLSLPVKLDDIAEEWFVSRSTIQQDMGAV-REHLHK 137 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 +Q+ L + R+ G+ R C+ L R F Sbjct: 138 YQVQLESIPHQGIRLSGSEWAIRACMTEALWRQF----------IEQITPDLATFHPDCI 187 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + D T + +++ R R + +L +L+ G N Sbjct: 188 DNLDLTYIDKVIHNSMNRFDIRISNEGHLYLVFNCAVTILRITRGHELTVNTKNNAV--E 245 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 + + EI + + E F+ R+ + + + + Sbjct: 246 EVINKACDEISKGLIYFLGNDLSHAELNFLHDQIIAQRINNQDSTTQKSGSH-NALSEHI 304 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 +N+ + N ++ L L THL+ + R + I N L + + YP T + Sbjct: 305 LNYINDRYNYDLRSDEKLKKDLNTHLSSLITRLQYHISTPNPLLSDIKQYYPFAYDVTLS 364 Query: 302 ALAGFESE-YGVHLSDEESGLVAVIFGAWLMQE---NDLHEKQIILLTGNDSEREAQIEQ 357 AL ++++E G +AV G L + + + +++++T + +E Sbjct: 365 ALTSASKHLLPYPVNEDELGYLAVHIGVSLERNYGAGSMRQTEVLVVTDAGNSTFRVVES 424 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 ++ + ++++ + +I + + P+I T +Q E Sbjct: 425 KIMREFPQLKFSRGLTLQEYESLSEVSE-DFVITTV--RISEKNKPVIKIAPFPTPYQLE 481 Query: 418 QIRKM 422 Q+ ++ Sbjct: 482 QVGRL 486 >UniRef50_A8R9X4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9X4_9FIRM Length = 689 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 59/420 (14%), Positives = 140/420 (33%), Gaps = 25/420 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 V +R I++ L ++ F+ + + + D+ + IL + L L Sbjct: 84 EYVFEENERLKFIIMILLAHKEELSIQHFTNILKISKNTVINDMKKLQMNILDSYDLKLL 143 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 Y + G +R + + +R + + + N Sbjct: 144 YDRSKGYYIVGKEYEKRNLIIYLVRSILKSLNG-----------KSMLVSVLEINEDVLN 192 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++ V L+ ++ I + L + L+ AG P + E+ + Sbjct: 193 GFKSDVEKVESLLKVQYTDERIREIPYILYFLYLRIKAGKHLDVLPEDYQHIVGTKEYGI 252 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 ++ ++ + +F+ F + + + +L ++ +++ +F Sbjct: 253 ILKVFEKYRIENAM-----DKIFIVTQFQISSINYADGYDTSFELELFEAASKVLYNFEN 307 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 L + F D + L D L HL A+ R + I+ + + L TR A+ FE Sbjct: 308 LVCITFKDRKSLLDALIQHLRPAMYRIRYHYHIEGKILNMILPQHSYLFELTRHAMQPFE 367 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQEND----LHEKQIILLTGNDSEREAQIEQQLRELT 363 +EE + ++FG W+ +E +++ I++ N + +L++ Sbjct: 368 EMIKSPFPEEELAYITILFGGWMTKEGTLEMVEKKRRAIVVCTNGVSISNFLFLKLQKAF 427 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I +S + F + + + + + + +RK + Sbjct: 428 PELEFICTLSSRQFYEFE--QEFDAVFTTVLLDTDKSQ---FLVKPIMNENDVVTLRKKV 482 >UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F792_LACPA Length = 651 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 58/413 (14%), Positives = 134/413 (32%), Gaps = 25/413 (6%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 RR I L L M ++ V D+ RE+ + L++++ + Sbjct: 93 RRSIITLNLIMQNSFVKMDNLADDYFVSRSTLERDLRAIKREVSK-FGLSVSSTVN-GIA 150 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 + G ++R + +R + + + QA+++ Sbjct: 151 IVGNEQDKRNYASRIISNYWRESI-----KANRLVVHLPQDFDNLIGSETLRTAQAVLSE 205 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 R + F L +++ ++ + E + + R Sbjct: 206 LQRVTKIEFTEYQYQSLLIHICISTVRIQNAEYLPTWSSASQAL--SPETSI---LTRLL 260 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + VP E ++ + + D + R+ + + F + N++ YD Sbjct: 261 EEAFNIQVPKSEQEYLNIHILAAKQSKLTPDDFKGQVVNRRLLN--IADFLK-TNIQIYD 317 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 + L + L HL A++R + N E RLYP+ + Y V + Sbjct: 318 D-QLINDLTIHLGPAMHRFQVGLQASNPYTSEIMRLYPQAFELAFDLSRKLDDRYLVTVD 376 Query: 316 DEESGLVAVIFGAWLMQEND----LHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK- 370 E +A+ F +++ + ++ + ++ + Q+L+ +NI Sbjct: 377 KNEIAYLALHFQSFMERTTKATVSNNKINVAVICSTGLGTARLLTQRLKASFADKINITR 436 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +SV + +II+ + LP ++ ++ + K + Sbjct: 437 VLSVPNAFKAKFVE--DMIISTIPLELPGQK--VVVIKPLFEPKEERLVAKEI 485 >UniRef50_C5EV18 Transcription antiterminator BglG family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV18_9FIRM Length = 640 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 54/424 (12%), Positives = 133/424 (31%), Gaps = 18/424 (4%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 L P + R I+ L + + + V D+ R + Y Sbjct: 77 NLGPEVPQTPGGRCIYIIQKLLFETRELNLVSLQDQIFVSGYSIDNDLKRIRRMLEPYTN 136 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 L L ++G ++R L + + Sbjct: 137 LKLVRNR-ECISLKGDEASKRRFYRDLLVAEVQENFLN------------MNLLAGLYKS 183 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 +D ++ + + L+ + + + + + E + Sbjct: 184 FDLIAVKDIFVDVLEEYDYSIHESMFPMVILHAGTSIERMNCANYVNMDN-GSQGLEDTI 242 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ---RDRQLRQSIKR 240 E+Q++ +R V E AL+ R + D + ++ + Sbjct: 243 EYQISMTFFDRISKRLHIEVHDGEVGMFALVIMGKRASNYTSDFVNFEGKWLNTKKLVAE 302 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 ++ L + F ++ L L H+ ++R + + EE R YP + Sbjct: 303 ALDGIYSLFGLDFREDGDLIAGLKMHIHGLIDRVKAKAHMQDVFVEEIKRKYPLVFDMGI 362 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 + E + +S+ ES +A+ GA + N + + + I++ ++ +++ Sbjct: 363 YVVELLEEKLEASISEVESCYIALHLGAASERINSVRKYRTIMIIPHNQTFSDMCVKKIS 422 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 E+ + + + +T + LI+ + + L P + +L + + + I Sbjct: 423 EMFRERVEVVGIFRYFEEETVSSLDPDLILTTFPLEHKL-DVPTVPINLFVDSETESGIL 481 Query: 421 KMLE 424 + + Sbjct: 482 QAVN 485 >UniRef50_B0MDG5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDG5_9FIRM Length = 683 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 58/417 (13%), Positives = 141/417 (33%), Gaps = 9/417 (2%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 ++ +R ILL L Q + + D+ + +E L + L L Sbjct: 86 YIVDPRERIDFILLYLLQQDDYIKTEALAIDHHTSVPTVRNDLKKV-KEQLGVYDLHLIQ 144 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD--D 126 + G+ + + + + L + + + + +R + D Sbjct: 145 KKGEGILLTGSEIEKNALMINILLNHADEATLYQWLRREGDVSNPFTKRMEEYGYLDVMS 204 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + N+ + + +D +L L ++ + + E + Sbjct: 205 ACYLRMKNIIRDQCELPAMIKDREYLEYILLIAMMIGCHQKGQPYEKVFETENFKGEEQR 264 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 V +++ R + + +E ++ + M + D ++R L I + + Sbjct: 265 VTRQVKRELEEEFHILLSQEEEQYIKWVLHMGMIQDTSSVYTVKNRILDSKIHTFIEYVE 324 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + ++ ++ L + LY H+ +AL R + I N L E+ + Y L R Sbjct: 325 DRMGLQLIRDKELKESLYVHIERALTRIRSGMCISNPLIEDVKKDYEELFGIIREGADRI 384 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 D+E G + + F L + +I+++ + ++ + Sbjct: 385 FQ--DDFFPDDEIGYLVLYFAVSLDKV-MKRSFRILVVCSGGMGSSKMLAHRVEQEIPEI 441 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 K +S+ F Q LI++ + + + + L++++ EQI + + Sbjct: 442 CVSKEVSLVGFGQEN-LDEYDLILSTIPLYIDKRN--YLKVSPLLSSNELEQIHEAI 495 >UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7A6_THEAS Length = 646 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 68/406 (16%), Positives = 132/406 (32%), Gaps = 13/406 (3%) Query: 19 QILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEG 78 ++L L TMA E G S + L H++ L + +EG Sbjct: 92 RVLRFLLPRRCPVTMARVMEATGAGRGAISAALDRAE-AWLAGHRIRLVRRPNVGLWIEG 150 Query: 79 TVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSR 138 RL L + F L+ + + + + L+A V Sbjct: 151 EEGALRLALSRLFWLSL------GSHGFDDFLRGRVSMEDPIFHPGEMSFLEARVRRALE 204 Query: 139 RLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRR 198 Q R + L ++L + + G + + E E + A+ + R + Sbjct: 205 MAQVRLTGEAVLGLTVHLAVSIKRVRTGGALEI--CRDEGLEGRREMEAARLMARWVEEG 262 Query: 199 ALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQG 258 +PP E ++A+ R + R + L++HF + R ++ Sbjct: 263 LGVTMPPGEVEYLAMHVMSSR-RLGCPGEKELARDAEAVARILLDHFARSLDRRLQEDPQ 321 Query: 259 LCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEE 318 L L HL+ ++NR N + + R + A + + G++L ++E Sbjct: 322 LLADLSGHLSTSINRLRCGFPSSNPILGQIKRAFCYSFEVGLEGAARVQEDMGINLPEDE 381 Query: 319 SGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAF 377 G V + A L + E + + +E ++ I S++ Sbjct: 382 VGYVVLHVQAALERLRGMEEEVRAAVFCPQGVGILRLMEAKVSSAFPGVRVIGAGSLED- 440 Query: 378 LQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 L+ L+I+ +P L I L + + +L Sbjct: 441 LKVVLEDRVRLVISTVPLPAYLDCQH-IVVTPLLRDEEMRSVEDLL 485 Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 5/64 (7%), Positives = 15/64 (23%) Query: 27 PGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLC 86 ++ ++ G + + E + + L L + G Sbjct: 15 ARDYTPLSDLAQRLGCSERTLRNHVRELEGPLRDRYGLILDRRPGRGVALLGDRSQVGRL 74 Query: 87 LFHW 90 + Sbjct: 75 IRDL 78 >UniRef50_C2DAD7 BglG family transcriptional antiterminator n=2 Tax=Enterococcus faecalis RepID=C2DAD7_ENTFA Length = 714 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 69/419 (16%), Positives = 151/419 (36%), Gaps = 28/419 (6%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 + S R +L+ + ++ F + + A DI + + +L + L + Sbjct: 107 DIIFSKEDRVHLLLIMILTRVEELSLDHFCIELQISKNTALADIKK-AKTLLLKYHLEIE 165 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 Y + G ++R+ LFH + ++ +T Q + + L Sbjct: 166 FSRKKGYVIVGEEWDKRIALFHSIIEIYKNYGDNVTVQLLESSQKYLDS----------- 214 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFN-PLQRRWAESCLEFQ 186 ++ V + L ++ D + L ++ ++ G + +R E E+Q Sbjct: 215 -VKNDVLKIEKFLGVKYTDEDFYPLLYFISSIFVRIERGQMIDSSRIQEREEIEHTKEYQ 273 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 I + +P DE +F++L V + A + L S+ + F Sbjct: 274 SLSYITTDF-----PDLPEDEKVFISLQLLSSNVRNKGMVAKKDLPLLANSLWEFLTEFE 328 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + D++ L +L H A R + + N L ++ Y L +++ Sbjct: 329 VNTLLVLSDKKDLLIKLLNHFKPAYYRIKYDLSTGNVLYDKIRSEYNVLHNFVCQSISPL 388 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQEN----DLHEKQIILLTGNDSEREAQIEQQLREL 362 E + +SDEE + + G L+ + + + ++L N IEQ+L+E+ Sbjct: 389 ERFFQTEISDEEIAYITLFVGGHLISNDHNDLEEKIIKAVILCPNGISMSKLIEQKLKEI 448 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 L S++ + + P ++ + + + + LT Q ++R+ Sbjct: 449 FPEFLFYPTNSIREYKKFMLPH--DIVFSTVPVKSEKK---VYVMNEILTNSDQLKLRQ 502 >UniRef50_Q5WJ14 BglG family transcriptional antiterminator n=2 Tax=Bacilli RepID=Q5WJ14_BACSK Length = 678 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 71/414 (17%), Positives = 144/414 (34%), Gaps = 25/414 (6%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 +S R + L F + + GV + A D+ REI L++ Sbjct: 86 ISKEDRVYLLYLYTFIRKEPISNFHYQTFLGVSKNTALEDVKR-TREICEEWNLSMIYSR 144 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G ++R + + + S F L +F ++T + Sbjct: 145 KDGYYLIGDEFDKRRLALYAV-------NILLDSPFGNELIHLPLNDWGYDDFIEET--E 195 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 ++ ++ + + +L Y + N + E +E Q A Sbjct: 196 SVFAEVVKKHSIMLVKSRKNEILPFLTYLRARKK-----YANLNFPEYQEHIIERQNAFL 250 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 G+ E F++L+ + ++++ + L Q +R++ F + Sbjct: 251 AGKEMAETFFGKEAVSEQYFVSLMLLIS-----MQESKYENALLEQLAERIIEEFERVTL 305 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + + + L LY HL A R F I + N L YP L + ALA Sbjct: 306 LPLENRETLKKSLYDHLVPAFFRISFKIPLVNPLINRIKEEYPELFEFVKIALAPLSMWT 365 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 G +S+EE G + FG +L ++ H +++ N ++ QL+E+ + Sbjct: 366 GQVISEEEIGYFTLHFGGYLEKDKRNHSTVNGLIVCSNGVSSSLMLKAQLKEMFPNIHFL 425 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 S+ + LI + +P + P+ L+ ++ + + + Sbjct: 426 NVHSIDQMTEIPK-SSYDLIFSTVRVP---STKPVYLVKPLLSQVEKNYLIQEI 475 >UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Clostridium difficile RepID=Q184U4_CLOD6 Length = 514 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 53/421 (12%), Positives = 131/421 (31%), Gaps = 11/421 (2%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S R+ IL LF + V D+ + L+ ++TL Sbjct: 85 YAYSPEDRKRYILSKLFIKNSKFRIRDICNELHVSRATVHKDLV-VIQNFLQNFKVTLVR 143 Query: 69 GYDGSYRVEGTVLNQRLCLFHW--LRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + +EG + R +F + + + + S+ + + YD Sbjct: 144 KTNNGVYLEGKEKDIRKAIFELATVNKSYTELKEILFSKSNECKDTPSTKIFKELFNYDF 203 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 L + + + +++ C+ + + R F+ Sbjct: 204 EKLSQITLHTLQVEKSNLSDEYYINFLIHIAICIKRISIKRYINLSEGFFRELLEHEYFE 263 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALL----FSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 ++ + + +E ++ L ++ L + + + Sbjct: 264 KSKILCANLSEAFDVEFIDEEVCYILLHIEGLLKSIKKTTTLEPLKNEEITEYNLSEAIA 323 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 H+ + N+ D+ L L HL L+R + I N + + R +P + + + Sbjct: 324 VHWGSILNLNLKDDLILIKSLANHLKSVLHRINYGFTITNPILNDIKRTFPYTYKAAKES 383 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLREL 362 + ++D+E G +A+ + + + IL+ + Q+L Sbjct: 384 NTVIKQLMNYEVNDDEIGYLALYLISAIDRSKS--PLNTILICHCSDGVSNLLVQKLSFE 441 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 +K + + + T LI+ + + LI + L+ + ++ + Sbjct: 442 FNQINIVKSIPLSSISFTNF-DDVDLILTTAPVDFE-HNAELININALLSKNDISRLSTI 499 Query: 423 L 423 + Sbjct: 500 I 500 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 71/324 (21%), Gaps = 28/324 (8%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R I L T+ T +E V + D+ E L L+L Sbjct: 3 KRLLDIAELLLNSSDYITVDTIAEELKVSNKTIRNDLV-ILDEWLLEFNLSLDKKTGSGV 61 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + G + + + + + L + R L Sbjct: 62 IILGNEDIKLKVIRDINDKSNCIYAYSPEDRKRYILSKLFIKNSKFRIRDICNELHVSRA 121 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 + L I + L++ ++ ++ E + Sbjct: 122 TVHKDL------VVIQNFLQNFKVTLVR-KTNNGVYLEGKEKDIRKAIFELATVNKSYTE 174 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + +LFS ++L V Sbjct: 175 LKE---------------ILFSKSNECKDTPSTKIFKELFNYDFEKLSQITLHTLQVEKS 219 Query: 255 D-EQGLCDQLYTHLAQALNR--SLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 + H+A + R I + E ++ A + Sbjct: 220 NLSDEYYINFLIHIAICIKRISIKRYINLSEGFFRELLEH--EYFEKSKILCANLSEAFD 277 Query: 312 VHLSDEESGLVAVIFGAWLMQEND 335 V DEE + + L Sbjct: 278 VEFIDEEVCYILLHIEGLLKSIKK 301 >UniRef50_Q5WJN3 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=Q5WJN3_BACSK Length = 634 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 50/410 (12%), Positives = 110/410 (26%), Gaps = 30/410 (7%) Query: 18 CQILLTLFQP--GLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 I + T T+ ++ + + + E L L L + Sbjct: 89 VHIAMMSLFAIMHETVTIQQLADEFHLSRSSIQKYLPDIE-ETLDRFGLQLARQARKGFL 147 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 V GT + R +FHWL ++R + + Sbjct: 148 VNGTERSIRRAIFHWLT-------------DKQVDLERVERWFDCEKDGGRGQIDRWLRS 194 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 C Q + + L ++L + + G +R E + Sbjct: 195 CQEDRQVFYSEGSLRVLTIFLCWWYERILHGHYVYIPQEEREAGHRLGE------LSEVV 248 Query: 196 QRRALQPVPPDEPLFMALLFSMLRV--PDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 E F+ L +V + ++ + L+ + V Sbjct: 249 SALCDNRTAEHEHAFLNTLLGQAKVVSYKNDAVLGESYQKEKDFCTSLLEQISTILQVDL 308 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 ++ L + L H+ A R + IDN EE Y + ++ G Sbjct: 309 LKDKKLMNDLLYHMKAAFLRIEQGLVIDNPYTEEIKVRYRAIYEMV----HQITADMGYT 364 Query: 314 LSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 L E + + A + +I++ + + +L++ I + Sbjct: 365 LVAAEVAFITMHVSAGFDRSKSKRFLPTVIVVCSTGLATSSILTTKLQQAEPGFHLINVV 424 Query: 373 SVKAFLQTGAPRGAALIIAPYTMPLPL-FSPPLIYTDLTLTTHQQEQIRK 421 + + + ++ +P+ + L + I+ Sbjct: 425 NTEDLEKALEESDVDFVLTTQELPIKQWNDTKIFRVSPLLNDEDKRTIQH 474 >UniRef50_C6JP15 Predicted protein n=2 Tax=Fusobacterium RepID=C6JP15_FUSVA Length = 686 Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 59/420 (14%), Positives = 128/420 (30%), Gaps = 16/420 (3%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 S +R I+ T+ S GV DI + L+ L L Sbjct: 80 YLYSFSQDEREKIIINFYLFKKEPTTIEDISIFLGVSAVTLKNDIKRIKK-YLKTFMLNL 138 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSF----ITSQFTPALKSELKRRGIARN 122 + + + G N R L L + + + IT + K + Sbjct: 139 SNENNKCLTITGDERNIRKLLLDILLKNYDITFKNDEIIITKTYYHGFFIPWKEMDNFFD 198 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 L+ + K L Y+ L ++ + + + Sbjct: 199 KTITNKAYKLLKNILKENNKNISDEAFKVLFFYILILLNRYQDHEITTIKNMN--FLSNT 256 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 E+ ++ + E L + F + + Q+ I +L+ Sbjct: 257 PEYLAVKKFLTESE------FSEGELLTLTEYFLGSNTFNFDHSFYGNWVQIETFIMQLI 310 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 + G ++ L + L H+ A+ R+ I + + + +F YP ++ A Sbjct: 311 KEVSKFGYSGLDKDETLLEGLINHIKPAIYRAKTGIQLSSEIYNDFKESYPLILNQVEEA 370 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLREL 362 G+++S+EE +A+ F + + K I+++ G+ + + ++E Sbjct: 371 WKKC-DFQGLNMSNEEIAYIAMHFQLAIKRVKKRVFKDILIVCGSGYSTSKFLAESIQEK 429 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + + + LII L P++ L+ ++ + Sbjct: 430 FSVN-IVDTIPYNMLETYKNVENIDLIITTIA-NLESTLLPVVTVSPILSKDDVRKLEAL 487 >UniRef50_C2C4I7 Protein-N(Pi)-phosphohistidine--sugar phosphotransferase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4I7_LISGR Length = 635 Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 120/398 (30%), Gaps = 24/398 (6%) Query: 29 LTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLF 88 T+ + V D+ L + L L ++ G R L Sbjct: 101 DFITIDQLASQLQVSRSTIQQDLKRV-DTFLHTYGLLLKRKAHYGVQIVGPEKKHRAALA 159 Query: 89 HWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRD 148 L + R D L + Q Sbjct: 160 KLLNTSSEQLSQ-------------TEAYRSFRKTLDIQALTLFIKERVTHYQIYISDVA 206 Query: 149 IHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEP 208 + + ++ + + + ++++I + + VP E Sbjct: 207 LRNMVDHVCILAFRVSQKNYIRMTGPLEKNPIYT---ALSKDIAAFIEAQYHLDVPEAEQ 263 Query: 209 LFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLA 268 F+A D + + +L+ I + + F ++ L + L H+ Sbjct: 264 DFLAEHLIGKVTVDTIS--KEEKMRLQAKINDAMTAIDQQYGTAFQPDEELQNALLLHIY 321 Query: 269 QALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGA 328 + R + + +DN + E+ Y + + + + + ++ +E G VA+ F A Sbjct: 322 PLMLRLHYNLQLDNPIIEDLYTRYANVFNISISFVQYLQDNEDFIITKDEIGYVAMYFAA 381 Query: 329 WLMQENDLH---EKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRG 385 L +E + K+I +L + + ++ +L I S+ + Sbjct: 382 SLEKERNQKFRMYKKIGVLCSSGAGAAYLLKMKLESAFTNAE-IVTFSMYELDK-LRNSD 439 Query: 386 AALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++I + + + P+I T L + +++ L Sbjct: 440 CDVVITTFPLTIDDLDIPVIETALLPGDQELARLKDTL 477 >UniRef50_A8RV91 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RV91_9CLOT Length = 633 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 64/424 (15%), Positives = 141/424 (33%), Gaps = 27/424 (6%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 S +R I L L + F+E + + D + +E + Sbjct: 72 ITKSSYTYSDEERAYWIELRLLCHEDELSTYHFTEELQISKNTLLSDFKKV-QERVNRFS 130 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 L L YR+ G+ ++R L H LR+ + E R Sbjct: 131 LELAYNRKEGYRLYGSEYHKRELLTHALRKLLNMPGG-----------EENLNRIYGIRK 179 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 L+A + +LQ +F + L + L++ T + + R + Sbjct: 180 EGVKELRANIEEIENKLQLQFTDERLKELLYIFYFTLIRIKNEKTVE-AMDRYRLVTTTK 238 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 E+ V ++ + +E + A+ + +V + + + LR + ++ Sbjct: 239 EYSVVAAFADKYRIK-----DENEIVNFAVQIQISKVHNRVHEDIGNLELLRDAGMHMLE 293 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F + VR + LY H+ A+ R + ++ + + Y L R A+ Sbjct: 294 RFESISCVRLDGRAEFLEILYQHMKPAVYRIWYGYHVEPDITDMILPKYQYLHEIVRKAV 353 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQEND----LHEKQIILLTGNDSEREAQIEQQL 359 +E D E + V+F +WL +E +++ +++ N + L Sbjct: 354 RPYEVYLTCTFPDPELVYITVLFASWLHKEGKLIQVQEKERAVVVCTNGLTVSQYLFVSL 413 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 EL ++ +S++ F + + ++ + + ++ Sbjct: 414 SELLPEIEFLECLSLRDFYEYD--KDFQIVFSTVRLETDKKQ---FVVFPFANDIAKKSF 468 Query: 420 RKML 423 R+ + Sbjct: 469 REKV 472 >UniRef50_C9A5U2 Transcriptional antiterminator n=3 Tax=Enterococcus casseliflavus RepID=C9A5U2_ENTCA Length = 644 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 64/418 (15%), Positives = 139/418 (33%), Gaps = 18/418 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 ++ +R+ +L LF+ ++ F + + + + R+ L +QL + + Sbjct: 92 TSEERQAYLLFLLFKNENPLSLDDFLDRLFISKNTFYSYLKT-ARDNLATYQLKIVNRPN 150 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + V G +R + L I L + + D T LQ Sbjct: 151 IGFEVLGNEFAKRQAISDLL----------IEKDLQEYLVGFTEMELELFDTIDLTRLQE 200 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 L L + + + + AG PL + + +V Sbjct: 201 LSLNHLAPLDLLDSDYYHKNILSHFALAISRFIAGHQINEFPLHVPALKEDAQ-KVVGHF 259 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSML--RVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + E + +M R+ + + + + ++ L+ ++ Sbjct: 260 LEEIDHAFDIQLTAGEKQYFIYYLAMNAPRLVETGDASDSSTKTAKAIVEELLTAIKQTS 319 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 N ++ L D L +H+ +N +L N L + +P+ L + Sbjct: 320 NYALETDKMLIDDLTSHIEGFINMNLMDARRSNPLLATIRKSFPQAYDLCLTHLETVSLK 379 Query: 310 YGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 +G + S +E G +A+ + + + H+ ++IL+ G IE ++ + + Sbjct: 380 HGFYFSPDEIGYIALHIAGAMERSSIRNHHKHRVILVCGTGRAMSRIIEAKIIKHYQETI 439 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 + LQ +I PL FS P IY ++ + +I +E+ Sbjct: 440 EVVDRFSYVELQQCDLSAIDFVITTV--PLEQFSVPSIYINMAKLDKEIGKIEPFIET 495 >UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_9MOLU Length = 628 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 67/412 (16%), Positives = 143/412 (34%), Gaps = 31/412 (7%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R IL TL + V S D+ R +L +QL + + Sbjct: 96 RITYILSTLLSDNHFVKADDLASQMYVSRSSVSSDLKIVKR-VLEKYQLKIEHKPNYGMI 154 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 V G ++R C+ L+ +L I + + + +V Sbjct: 155 VVGLEKDKRDCIIK------------------EQLELQLGHSTIKKEWL--ATISDIVVD 194 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + + R + L L++ + + GI + R+ E +A++I Sbjct: 195 SLMKAKYRISDVVLQNLVLHICVSIQRMQHGIYIDNPQMARQ---YGHEHVIAKKILDEL 251 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 + +E F+A+ R + +++ + ++ + ++ FY Sbjct: 252 ASIYHFIITENEISFLAIHLLGKRSY---EENDLISKEIDYFVNGMLEEIKIKTDIDFYG 308 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 + L L HL L R + + NT+ ++ YP A + + LS Sbjct: 309 DVELKISLALHLVPLLVRLESQMQLQNTMIQDIQANYPLAYDVAVIAASYISEQKHYQLS 368 Query: 316 DEESGLVAVIFGAWL-MQENDLHEKQIILLTGNDSEREAQIEQQ-LRELTLLPLNIKHMS 373 +E G +AV F L +EN ++ K+++++ I+ L+E + +++ ++ Sbjct: 369 SDEVGYLAVHFSLSLSKKENKINPKKVLIICNARRGDYLMIQHTFLKEFNEMISDLEIIN 428 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 Q I A + + PL + + + ++I+ L+ Sbjct: 429 ALEIPQYN-LDDYDCIFATF-LNHPLIPKRALRINFFIDQKDIQRIKNSLQG 478 >UniRef50_Q8EMT4 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMT4_OCEIH Length = 685 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 65/423 (15%), Positives = 138/423 (32%), Gaps = 25/423 (5%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 P +LS R +L+ + ++A F+ + + D+ + L + Sbjct: 78 PISNREVILSEVDRVKFLLIMILGGKEPLSLAHFTSQLSISKNTVLNDMKQAQNH-LNAY 136 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 QL + Y++EG R + L+ L + R Sbjct: 137 QLEIQYSRKDGYQIEGDEFQARKVMIWLANDIILHSDEKEKLHEALQLEGSLLEQFHRR- 195 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + +L F + + L + G Q ++ + Sbjct: 196 ----------LERVENKLHIEFTDEKLMTMPTIFSLILRRIRKGFQIQPLSIRYDELSNT 245 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 E+Q +EI + +P E LF+ L V L +I ++V Sbjct: 246 KEYQATEEIL------YDKSLPVPEKLFITLNLLTGSVHRNQLLIEDSIPDLVPAIDKMV 299 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 F + + F D + L D+L HL A R + + + + ++ + A Sbjct: 300 RLFEKNACIIFQDREQLIDKLLQHLTPAYYRIKYKLTDAIVFESTYNEEFEQIRHLIKRA 359 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDL--HEKQIILLTGNDSEREAQIEQQLR 360 L + + E + ++ W+ + + + + I++ + QL+ Sbjct: 360 LEPISEVMESKIPENEITYIVMLVSGWMHMQGESMTEKVKAIVVCPQGVSVSRLMFHQLK 419 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 EL + + +SV+ FL G ++ +P + L + L ++++R Sbjct: 420 ELFPEFVFLDSLSVREFLTYGL--EYDVVFSPIALETE---KNLFISKTMLRPEDKQRLR 474 Query: 421 KML 423 K + Sbjct: 475 KQV 477 >UniRef50_Q184X1 Transcription antiterminator n=6 Tax=Clostridium difficile RepID=Q184X1_CLOD6 Length = 635 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 54/427 (12%), Positives = 129/427 (30%), Gaps = 16/427 (3%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTAT-MATFSELNGVDDDIASLDISETGREILRYHQL 64 LS QRR +IL L T + ++ V D I + + L Sbjct: 83 KENKSLSVEQRRMEILKYLLLNSNNITSINQLADKYYVSKTSIVNDFKYIEAWI-KEYNL 141 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFIT-SQFTPALKSELKRRGIARNF 123 L ++ G ++ R + + S+ T + + Sbjct: 142 KLN-KTLEGTKIIGKEVDIRKSIAKMMDDLLDENYEQHDISELTRLDSATFSALINLFDI 200 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 ++ ++ L L ++ CL + G + + ++ Sbjct: 201 DSIIFVETIITELEYNLGYTINQPYYINLITHILICLKRIEEGNQIESQEEREISVDNLD 260 Query: 184 E--FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR- 240 E ++ + + R + DE +++ + ++ + ++ Sbjct: 261 ELVYKNVTTLIDKIENRYRVKITKDELMYIYIFLVSSGFSSESNSSYNDESDRLSESEKV 320 Query: 241 ---LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 ++ + N+ ++ L L H+ LNR + I I N L E + ++ Sbjct: 321 SSIMIENMSRFLNINLKNDDLLQKSLAYHVRPMLNRLRYDIQIKNPLLGEIQERFSDVLG 380 Query: 298 TTRAALAGFESEYGVH-LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIE 356 + + +S +E +A F A + + + K++I++ + Sbjct: 381 LCMMTINIMTEYDNLKNISIDEVSYLATYFQAAIERN--MSSKRVIVVCHTGYGTSQLLA 438 Query: 357 QQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQ 416 +L+ + + + + + T+ L L I + L + Sbjct: 439 ARLKREFPEWTIVDIVPMHQLSKRNLD---DVDFVISTVNLDLKDKLHIVVSVLLMENDI 495 Query: 417 EQIRKML 423 I+ L Sbjct: 496 NNIKNAL 502 Score = 71.3 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 84/310 (27%), Gaps = 27/310 (8%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R+ + L + + F + V D D+ + L + + Sbjct: 5 RQIEFLKLILNENKYRPIKYFKDKLNVSDKTLQKDLKMIEK-YLETFNIKIDIKRGYGIL 63 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPS-FITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 +E ++ L S I S+ +L E +R I + ++N +N Sbjct: 64 IE-----------DLAKKNIDLINSLNIQSKENKSLSVEQRRMEILKYLLLNSNNITSIN 112 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 + + I Y++ + + N E + + I + Sbjct: 113 QLADKY--YVSKTSIVNDFKYIEAWIK----EYNLKLNKTLEGTKIIGKEVDIRKSIAKM 166 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 + + + L + D ++ ++ Sbjct: 167 MDDLLDENYEQHDISELTRL----DSATFSALINLFDIDSIIFVETIITELEYNLGYTIN 222 Query: 255 DEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLY--PRLVRTTRAALAGFESEYGV 312 L TH+ L R I++ E + + + + E+ Y V Sbjct: 223 QP--YYINLITHILICLKRIEEGNQIESQEEREISVDNLDELVYKNVTTLIDKIENRYRV 280 Query: 313 HLSDEESGLV 322 ++ +E + Sbjct: 281 KITKDELMYI 290 >UniRef50_Q3XZH6 Transcriptional antiterminator bglG:Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=9 Tax=Lactobacillales RepID=Q3XZH6_ENTFC Length = 640 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 60/418 (14%), Positives = 139/418 (33%), Gaps = 21/418 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 + + Q R ++ L ++ SE V +++E + YH L L Sbjct: 84 QTEMDKKQLRQLLIFHLLVAKDGFSLEELSEKLYVGKRTIRKELTEL-QSFFEYHHLQLV 142 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 + ++G +R L LR + P +P+LK + + Sbjct: 143 SKTKLGTFLKGDEQEKRQLLVKTLRNMQKEDPQ------SPSLKEFFAKDTL-------K 189 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 +Q + + + + +++ + L + + + + E ++ Sbjct: 190 VIQHTLQDVFYENHLE-QPNGLASVEIHIYFMLERMKQYQKVKLSKDENEVVEHTQAQKL 248 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 + +I PDE ++AL + + A + ++ L+ + Sbjct: 249 SSQILAKLATIYPIEFSPDEINYLALRI--ANLFTNSQAATRFQKESSALADHLIEQVEQ 306 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 ++Q L L +HL+ R + + I N L + Y +L + L + Sbjct: 307 FLGYSLKEDQLLKQNLRSHLSSTYFRLHYGLQISNPLTKNVFSTYTQLFLVLQLILEDYF 366 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ--IILLTGNDSEREAQIEQQLRELTLL 365 + ++ EE+ + + F A + + ++ +L++ +E +L Sbjct: 367 EKENFYVPQEETAYLTIHFQAAIERHKHQKSRRYQTVLVSEYSKAMATFLEARLNRELPE 426 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + + K L+ I+A +P S P+I +T + K + Sbjct: 427 LTIMDLVEYKPELKRQDFPSVDFILAT--LPFKHISIPVIEISPMITETDLAYLTKYM 482 >UniRef50_UPI000196BD9B hypothetical protein CATMIT_02553 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BD9B Length = 639 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 60/417 (14%), Positives = 135/417 (32%), Gaps = 22/417 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S+ R IL L + ++ V + S I + L + L Sbjct: 89 SSEDRIHFILNKLLYSHDYISADDLADSVYVSKNTFSNYIKIIKKS-LPLYNLEYIVKPG 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ G ++R C+ + L S F+ K I N + + + Sbjct: 148 VGIKIIGNESDKRDCIIN---ETHPLNEYSTVSTFSKGEK-------IYYNDVEVNYIVS 197 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 L+ + + + + + L Y + + + ++ EI Sbjct: 198 LLINVFNKHKIQTDDYKLKNLTTYFALMISRILNDDYIS---VMNNTEIPNNIKEIMNEI 254 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + E +++L F + D+ + I + + N Sbjct: 255 CESLSDYYDITITRGEKQYISLHFIS---NIKYNNNSIDDQSIHNLIDSFLEGIYKGYNF 311 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 D++ L L+ H +++ + N L YP ++ L+ + Sbjct: 312 DLRDDKILRSDLFYHFRTSISMMELHLENKNPLLNTIKTNYPLPFEISKTILSQSSNI-- 369 Query: 312 VHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQQLRELT-LLPLN 368 + +++ G +A+ GA + + + +K + L+ G+ +E +L + Sbjct: 370 ITFPEDDIGYIALHIGAAIERCFSGSIKKKAVYLVCGSGQATARMLEARLHNVFANKLTV 429 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 +K +S+ +L + T+PL P I D +L E + +++ S Sbjct: 430 VKRLSLIEYLNCTENDFKEIDCVISTIPLEQSYVPTITVDFSLNQQDIEMVSRLITS 486 >UniRef50_B1CBZ7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBZ7_9FIRM Length = 716 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 61/428 (14%), Positives = 131/428 (30%), Gaps = 12/428 (2%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 SA +R I+ L + ++ S + D+ + L Sbjct: 85 PYEYKYSAEERCSFIIGYLLKRNGYISIEKLSNELSTSISTITKDLENAEK-WLEDKNTK 143 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 L ++ + +R L+ L I +LK + F D Sbjct: 144 LIKKAGKGISIQIDEI-KRRALYRELTDEVLTPSYVINYISNISLKERANTILLDDLFKD 202 Query: 126 D--TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 L + + L + F L ++L + + + + + + Sbjct: 203 LDREFLIGQIQHLEKELGEIFSDETFSSLLIHLSIIVYRVSRNCSLKE-ITGETTLNNSI 261 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQ---LRQSIKR 240 E+ + +I + R +P +E + + +V + + +R + Sbjct: 262 EYTLTSQIIENINTRFTITIPSEEIYYFTVHLLGAKVITKNTKYKFNETEAIIIRNIATK 321 Query: 241 LVNHFRELGNVRFYDE-QGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 +V L V F ++ + + D L THL + R + I N + E + Y L+ T Sbjct: 322 MVEEIGNLYAVDFKEKKEDVIDGLITHLIPTVYRIKYKKRILNPIYPEMEQKYSDLLGNT 381 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQ--ENDLHEKQIILLTGNDSEREAQIEQ 357 + ++++E +A+ F A L + I++ G+ + Sbjct: 382 KIVCRHLSEYCKEEINEQEVSYIAMHFLAALHSKLNEKTDMPKAIVVCGSGYGTAQVVAM 441 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 QL L + + + + II+ + I + Sbjct: 442 QLSSLFSVEIKAIVSQREIINLDKNNQNFDYIISTVEIANLSKD-EYIKISPMFNHNDFL 500 Query: 418 QIRKMLES 425 +I K L + Sbjct: 501 EINKHLRA 508 Score = 51.7 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 93/317 (29%), Gaps = 29/317 (9%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R +IL TLF+ ++ + S+ + I ++++ + L Y Sbjct: 6 RCFKILRTLFEKDDYVSVKSLSKELDCSERIIRYNVNKIEEYLRNKKYSFLYRDYKKGLL 65 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 V +Q + + + + LKR G L ++ Sbjct: 66 VIKNKQSQDFYNNYLNISHPYEYKYSAEERCSFIIGYLLKRNGYISIEKLSNELSTSIST 125 Query: 136 CSRRLQKR---FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 ++ L+ E ++ + + GI+ Q + ++RR L +V Sbjct: 126 ITKDLENAEKWLEDKNTK--------LIKKAGKGISIQIDEIKRRALYRELTDEVLT--- 174 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 P +++ + R L D +D I + + H + Sbjct: 175 -----------PSYVINYISNISLKERANTILLDDLFKDLDREFLIGQ-IQHLEKELGEI 222 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 F DE L HL+ + R + + E T + + + + Sbjct: 223 FSDET--FSSLLIHLSIIVYRVSRNCSLK-EITGETTLNNSIEYTLTSQIIENINTRFTI 279 Query: 313 HLSDEESGLVAVIFGAW 329 + EE V Sbjct: 280 TIPSEEIYYFTVHLLGA 296 >UniRef50_C9A1R6 Predicted protein n=4 Tax=Enterococcus RepID=C9A1R6_ENTGA Length = 651 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 60/416 (14%), Positives = 139/416 (33%), Gaps = 22/416 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S R+ I F F+E V D+ E + + Sbjct: 88 EYSPEYRKLFIFANYFFSKKPMHYQGFAEYFYVSYQSIKKDVDELFAFCQKK---KVRAS 144 Query: 70 -YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 ++E Q+ +L + T + + + + T Sbjct: 145 MSAKGLKLEEEESVQQATFKSFLEKH------------TDSARLDHSAIQTLFDPKIVTL 192 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQF-NPLQRRWAESCLEFQV 187 AL++ S L ++ S + L + L+ L + G + L + + V Sbjct: 193 TTALISEISLTLGRQLNSYFVESLTVSLEIFLSRICLGRHLEQQENLGFEKLKQMKLYMV 252 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A + + + ++ L + ++ +R+ + ++ + ++ Sbjct: 253 AVSFAERIESELAVSLAETDIQYICSLLLAHGIEPYMQITEKREANVIETTEEMIEKMSR 312 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 L + + L L +H+ ++R + + N L + Y + T+ A+ G E Sbjct: 313 LLDTDLTQDNLLLQALLSHIVPMIHRLKNGMLVKNPLLRLIKKQYSTMFTLTKYAIGGLE 372 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + + L+++E + + F + K ++++ + I ++++ Sbjct: 373 KNFALFLTEDEVSFLTIHFQLAFEKIKVT--KHVLIVCSSGLATSELIFNRIKQTISATT 430 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 ++ +S L + + LII+ PL SPP++Y TT + I L Sbjct: 431 VLEIISA-EKLASTSLELVDLIISTV--PLEEVSPPVLYVSPLPTTEEIAMISANL 483 >UniRef50_Q2BFF6 Putative regulator of sorbitol operon n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFF6_9BACI Length = 643 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 68/432 (15%), Positives = 144/432 (33%), Gaps = 40/432 (9%) Query: 1 MMPTLAPPSVLSAPQ-RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREIL 59 + + S L++ + R I+ L T T+ +E + ++ + L Sbjct: 78 LEESSPEDSSLNSQKGRIGFIIDRLINSEETYTLDDLAEEMHLGRTTLVNELKKAAVS-L 136 Query: 60 RYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGI 119 ++L + + + G L+ R + L + Sbjct: 137 ETYKLIIHGKPNRGMELSGRELDLRFYILDHLY------------------------DVL 172 Query: 120 ARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 ++ D ++ + S ES L ++ L + + + + Sbjct: 173 YGDYPLDEDITESIERISHEYN--LESPTQERLMEFIIIMLDRLLKNHHLEAIEEKHKKL 230 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK 239 E +A EI Q++ +P E LF+ + + R P R D + ++ Sbjct: 231 IGTQEHGIALEIVEAIQKQLPIEIPEAEALFITIPIAGRRTPTNNRTLA--DIAITDDVR 288 Query: 240 RLVNHFRELGNVR---FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 RL+ E + + L HL LNR +F + + N L YP Sbjct: 289 RLLEQILEQVGFKKEIIEQNESFFQDLLYHLTFMLNRLIFGLRLKNALLANVKEKYPVAY 348 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSEREAQ 354 + + ES YG+ + ++E G +A FG ++ Q ++ ++ G Sbjct: 349 KMAEISGQVIESRYGLEVPEDELGYLAFYFGVFIGQSDIKVKRFQKAAVVCGTGRGTAKL 408 Query: 355 IEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTH 414 + QL + I + K ++ L+ + +P + P I + Sbjct: 409 VSIQLERILNQDTEINLFAEKDAVK-EVLDSYDLVFSTVKLPFETHA-PFIMINEIF--- 463 Query: 415 QQEQIRKMLESA 426 + ++++ +E A Sbjct: 464 DESRVKREIEKA 475 >UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4E8_9FIRM Length = 654 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 54/394 (13%), Positives = 129/394 (32%), Gaps = 14/394 (3%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R I+ L T+ + + + D+ E REI + + L L + + Sbjct: 113 ERVNYIVKKLLTVDYYLTIEDLVDELYISRSTLTADLKEV-REIFKDYNLELISRPNYGI 171 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + G + +RLC+ + F + N + ++ L+ Sbjct: 172 LLVGEEIAKRLCIAEYFFHANVSTGYFAADN---------AMFVSSTNQDEIRFVRGLLE 222 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC--LEFQVAQEIG 192 + + + +++ + + + S E+ AQ++ Sbjct: 223 EIMEKYGIHMSDQSLQNFVIHIIIAIRRWKFYNYVKIEDENLGELRSSVAREWPAAQDLV 282 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 R Q + +P +E L+ AL F + + + Q+ +++ + ++ V Sbjct: 283 RRLQDKLEILLPQEEILYFALHFKSKHITELDEITSEEIEQVEKTLYDIYRMLQKRFGVI 342 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 ++ + L H+ + R + + N + +F Y T E + V Sbjct: 343 AINKDRYEEYLRMHIPAMVARLRSGLVMRNPMIYDFLNKYLFSTHITMMISDILEQNFNV 402 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN-IKH 371 ++ E + + E+ H +I+++ G + ++ E N I+ Sbjct: 403 RMNKNEFAYLVLYTNLLFSTESRPHGAKILVVCGRGRPETITLINEINENHAALANMIEI 462 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLI 405 V + A LI++ + P + Sbjct: 463 CDVGELENHDLHQ-AELILSTVPLQASYPVPSIY 495 >UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_9MOLU Length = 613 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 47/413 (11%), Positives = 114/413 (27%), Gaps = 33/413 (7%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 R + + + + + E RE L LT+ T Sbjct: 80 EESRLAYLFNRFIDCNNYLKIDDLCDELYLSRTQLKQSLKEL-REYLHDFDLTIATKAYY 138 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 +EG +N+R + H+ +F ++ + Sbjct: 139 GMYLEGDEINKRRAIAHF--------------------------EEYQMDFDILQRIRDI 172 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 V + L +L + + + E+ + I Sbjct: 173 VISSIANADYVISDDVLDNLVAHLYIAYYRVMKKEYANIDSEWLEEIKEEKEYSLGCAIM 232 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + +E ++ + + ++++ +K ++ ++ N+ Sbjct: 233 ELMNKIMAMEYRIEEVAYLTMHLCGKN--SKQLSNNYINQEILDIVKEMLMIIEKVANIP 290 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 F + L L HL + R + + N L +E A + Sbjct: 291 FQADLNLQLALSLHLIPLVKRIQYGTFMHNPLKDEIKSKLIMAYELAVKACVVINQRFNC 350 Query: 313 HLSDEESGLVAVIFGAWLMQENDL-HEKQIILLTGNDSEREAQIEQQLRELTLL-PLNIK 370 LS++E A+ L Q+ H I+++ + +E +E +++ Sbjct: 351 TLSEDEIAYFALHINLSLEQKKYNFHRNNILVVCSSGVGSARLLEYFFKENFNDYIEHLE 410 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 S+ + I + + + + P+ + + +I L Sbjct: 411 VCSLHELENISLTK-FDCIFTTVPLAIKV-NIPIFLINNLINQRDTIKITNNL 461 >UniRef50_A0AFI1 Complete genome n=2 Tax=Listeria RepID=A0AFI1_LISW6 Length = 687 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 60/417 (14%), Positives = 143/417 (34%), Gaps = 28/417 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + +R +LL + + + F+ DI +++L+ L + Sbjct: 88 TEKERVHLLLLMILTSETALSTSHFTSALQFSKATIMRDIKML-QQLLKKEDLEILYTRQ 146 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCP-SFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y+V G R + + ++ +FT K + + Sbjct: 147 NGYQVIGDEWQIRRKMMELIAEVHQMFHGDNYLRKFTSITKETI------------QQIY 194 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNP-LQRRWAESCLEFQVAQ 189 + ++L+ +F I L L + G + E+Q + Sbjct: 195 EKIERVEKKLELKFTDEKIFILPYVFASMLRRIEMGKGISSYFQINYNELSDTNEYQAVE 254 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + +E L+MAL V + +L +++ ++ E Sbjct: 255 ILLEGVA-----DLAEEERLYMALQLLTSNVSYQSVLTENQLPRLNRALDAMLTILEEKA 309 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 ++F + L ++L H+ A R + + + +P+ + L + ++ E+ Sbjct: 310 LIQFKNRVELVEKLSLHMKPAYYRIKYHLTMSFMIPDVIHEEFNALHFLVKESIWPLENF 369 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDL---HEKQIILLTGNDSEREAQIEQQLRELTLLP 366 G + DEE + + G L++ ++ + I++ N IE QL +L Sbjct: 370 IGETIPDEEIYFITLFIGGHLIKTGEITQHKKPSAIVICPNGVSISKLIESQLAKLFPEF 429 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + MS++ F +T ++ + + L ++ +Q+++R+ + Sbjct: 430 HFWQTMSIREFEKTA--PNVDVVFSVTPVETTCK---LYIMSHYMSFEEQQRLRQRV 481 >UniRef50_B9Y6Q3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Q3_9FIRM Length = 655 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 60/414 (14%), Positives = 144/414 (34%), Gaps = 27/414 (6%) Query: 21 LLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTV 80 L+ T T + + I++ R L+ + L + + Sbjct: 104 LILKSTKNNTLTTKQLASQLYLSVPTTLKVIND-CRSWLKLFNIELNVVRNKGLELAYNE 162 Query: 81 LNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRL 140 ++ RL L H++ + + F D ++ + + Sbjct: 163 VSYRLALKHFILKFDTETNVEESILF-------------FMPGLDLDAIRRGIMETEKEW 209 Query: 141 QKRFESRDIHFLCLYLQYCLLQH--HAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRR 198 F + + +Y + Q+ G +F+ + + E+ A+ I + Sbjct: 210 SFEFAEESFNEVLVYASLAIYQNQQKNGRKLKFSDEELEMLQKYNEYSFAEAIFKKLGAH 269 Query: 199 ALQPVPPDEPLFMALLFSMLRVPDPLRDAH------QRDRQLRQSIKRLVNHFRELGNVR 252 +P +E F+++ ++ D A + D +L++ ++++++ + NV Sbjct: 270 FNMTLPTEEKAFLSIQILCSKLIDSGYSADSGEVLREYDNKLQEFVRKIISVVSNVLNVD 329 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 ++ L L H+ L R + G N L Y + R FE + + Sbjct: 330 LTHDEALVHGLLIHMRPTLFRLRYERGHTNGLTNYIKTEYKKTFRVAWLISVLFEEYFDL 389 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 +S++E G + + + L + + + +L++ + + ++ L ++K + Sbjct: 390 KVSEDELGYIVLYIQSALERN--ENPVRTMLVSASGMGINQMLCDKICRSFSLIHSVKVV 447 Query: 373 SVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA 426 SV F + LI+ L L P ++ D L+ ++I + + Sbjct: 448 SVHDF-KIEKVEDVDLILTTR--ELGLHDPRIVEIDDFLSDASIQKINHWIRNT 498 >UniRef50_C0CTD3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTD3_9CLOT Length = 656 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 57/410 (13%), Positives = 134/410 (32%), Gaps = 22/410 (5%) Query: 14 PQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 +R +++L + T+ SE + + ++ +E L + LTL+ Sbjct: 118 DKRIHEMILEIIDQDE-ITIEKLSEAMFLSPSTLNK-MTPDVKEFLGRYNLTLSGKPHYG 175 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 + G R L G C + + + + E R F Sbjct: 176 LSITGGETEIRTLLGDI---GLDYCNARLVNTGIYNISEEELNRVDRLVFDRI------- 225 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 + D++ L + L + G L +Q+ I Sbjct: 226 ----QEYGLIVADMDLNNLIARIVVALSRSRKGRHVTGMSLTAPVTGHN--YQMILSIME 279 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 + + +E L++ + + + + R++R+ + ++ L + + Sbjct: 280 TLGQELDIEITEEECLYVMVYSGFIGYDLNVA-DAEGCREMRRFVDDFLDEISRLTGINY 338 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 ++ + + L HL + R+ N + + YP + FE +GV Sbjct: 339 DRDEKVMNVLSLHLKALMQRARAGNYSPNPIIAQIKNRYPLEMNYAILMAQRFEERFGVS 398 Query: 314 LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMS 373 ++++E G + V G + + + ++L I ++++ L Sbjct: 399 INEDEIGYLTVYLGVY--EPQAGERVKAVILCNYGIGTSQMILEKIQSEIQNILICGVYP 456 Query: 374 VKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 V+ +L R +I++ + P+I + L+ I++ L Sbjct: 457 VR-YLDLALDRKPDVILSAVPVENYGGDVPVIVSHDLLSEKAIAGIQEQL 505 >UniRef50_B0NXI9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NXI9_9CLOT Length = 650 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 66/418 (15%), Positives = 135/418 (32%), Gaps = 20/418 (4%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 L+ + RR IL + T+ + S+ V DI+ + I Sbjct: 83 DNLSEDEKYTPEYRRLWILKKVLIDCEIITLESVSKEFLVSKTSLYQDIAVINKSIESQS 142 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 + L G + G + + ++L + S FT L + + I Sbjct: 143 DVKLEVGE-CGICILGEESEIQNAVNNYL---LSESKEEMFSDFTHKLGNFFELDVI--- 195 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQH-HAGITPQFNPLQRRWAES 181 + L+ L + + L + L + + + Sbjct: 196 ----KAVSDLILNDFEELTEVLSEYYLKSLLVTLIMQSSRLLKKKHMNEETEISYNNIRH 251 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 + VA I + + ++ ++ RV ++ ++++ + Sbjct: 252 METYIVANSIAEQLKYQLHITYSNNDMEYLCRQLYAHRVTHHVKHMR---TDYEETVRDV 308 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 + E+ + ++ L + L HL + R I I N + + + YP L T Sbjct: 309 IKRMSEIQKLDLTRDKKLYESLLYHLPPMILRLQNNIQIVNPMLDNIKQEYPELFTTMWY 368 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRE 361 AL E Y V L+++E L+ + F L Q + I+++ I ++++ Sbjct: 369 ALTQIELRYQVTLTEDEVSLILLHFQVALDQFEQVG--NIVVVCTYGVSSSQLILSRVKQ 426 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 + NI + K + LII+ + P S + + LT I Sbjct: 427 ILPAKDNITVTNTKKLKEID-LSKVDLIISSVDIEDPEIS--YVKVNPLLTKDDYANI 481 >UniRef50_B0MFY1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFY1_9FIRM Length = 684 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 66/420 (15%), Positives = 154/420 (36%), Gaps = 13/420 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S +RR LL + T+ L V + DI E + IL +++ + Sbjct: 83 YYYSVQERRILELLMILLSAEVVTIEKMQNLFDVSKNTILKDIKEWKK-ILGNQNISIAS 141 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 Y ++G R + +++ P I ++ L Y + Sbjct: 142 SIKFGYVLQGEEFAIRKIVGKEIKKLQNFQPKDI---LKKWMQQSLVTITGEDYDYLEIA 198 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVA 188 + L+ + + + C + ++ G T + ++ +Q Sbjct: 199 -RCLIKQYEQDENIKLVLENEELECSMILISWIRSMDGYTMNLHTEEKVTLVETKPYQSL 257 Query: 189 QEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFREL 248 ++ + +P E ++A L ++V + Q D + K LV +F + Sbjct: 258 KQSFEKL-KVYNLEIPESEIYYIATLLLGIKVAQFVSQD-QEDLYISNFTKALVVNFERI 315 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 + F ++ L +L H+ R + + N L ++ R+YP + T A+ + Sbjct: 316 ACISFDNKDRLMTRLKGHIRPLYYRLKYGVQSTNPLVQDVMRMYPEIYDFTGRAVREMKD 375 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEK----QIILLTGNDSEREAQIEQQLRELTL 364 + L+ +E + + F + + + +K ++++L + +++QL+ L Sbjct: 376 DLAKMLTSDEIAYLTIYFISD-EKYQTIQKKSNVSKVLVLCADGMATSTLVKEQLKTLFG 434 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 +IK + + ALII+ L +++T++ L +++I +++ Sbjct: 435 STADIKLGIISEAKKYN-LDDFALIISTGYSELLAHRKNIVFTNVILEDSDKKKIIQVMN 493 >UniRef50_A9B4K3 Transcriptional antiterminator, BglG n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4K3_HERA2 Length = 513 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 70/427 (16%), Positives = 135/427 (31%), Gaps = 18/427 (4%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L+ QR + L L T+ + V D+ L L + Sbjct: 90 LTPEQRGQLLALVLLITPEPLTLNQLQQDLAVARTTVLKDLD-VMEIWLASFGLQVVRRQ 148 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 +EG L +R L L I+ Q L++ + Sbjct: 149 HRGCWIEGAELAKRQALAALLWGDVPFSLPIISVQAGLGFDFVLQQDAALLPII--QRVN 206 Query: 131 ALVNLC------------SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + + L RF + I L L L + +A ++P W Sbjct: 207 SFLQELDLPKAQQQAIWAEAALNARFSDQAISLLALALALQQQRINAQQYLHWHPETLHW 266 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 E L + VA + +H+ +A + E +AL P + H+ D + I Sbjct: 267 LEQQLVWSVATQFEQHYGLQASATIDLAEIAGVALQLVCAARERPWPNQHETDHVTVRLI 326 Query: 239 KRLVNHFRELGNV-RFYDEQGLCDQLYTHLAQALNRSLFAIGI-DNTLPEEFARLYPRLV 296 L++ +V ++Q L D L + A NR F + I + E + Y Sbjct: 327 NALIDLIASSYDVAELANDQLLGDGLAALIPPACNRQRFGLWIPTHQSSETQSERYATER 386 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIE 356 R + GV L + + ++ A +++ + + I+++ + + Sbjct: 387 RVADLIDRKLLATIGVALPIDARDELILLLRAAVVRARPVQTRNILVVCPSGMATTQLLV 446 Query: 357 QQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQ 416 +L+ + +S++ L A L+I + L +I L Sbjct: 447 ARLKARFPKLGIFEVLSMRE-LSAERLANADLVITTAPLALASVPIDVIQVHPMLHPEDI 505 Query: 417 EQIRKML 423 + + + Sbjct: 506 AALTQWM 512 >UniRef50_C4ZB72 PRD/PTS system IIA 2 domain protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZB72_EUBR3 Length = 673 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 63/435 (14%), Positives = 134/435 (30%), Gaps = 32/435 (7%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R+ I L T T A FSE V ++ DI+E E+L + + Sbjct: 87 SQKKRQNYISYILLSGWDTYTYALFSEELNVSKNVIMDDINELDAELL-LFGIKVHRTAG 145 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 G+ L+ R + H+ R I + + + + + Sbjct: 146 YGIYATGSELDIRKAMRHFCRYPIS-DKQVIKTDDHRLSRRAAEVIANNFRSVNLSMAVD 204 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQ---------------- 175 +++ RR F L Y+ L + + + L Sbjct: 205 MIHHVERRFDIIFTDYTFQMLAEYIAIALFRVDVEKELKTDELDLSNRICDAASDGDAGT 264 Query: 176 -------RRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH 228 + +A+E +R + E +++A+LFS + + + Sbjct: 265 ETEQQVQKNGFVMIEHENMAKEAAGFLERHHGISLSQPEIMYLAMLFSCAEGQNRVVMSC 324 Query: 229 QRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEF 288 + + ++ + L + + L + + + L ++ R+ F I IDN + Sbjct: 325 EEALSIE---DEMIVYLSNLLAANLIENELLRESMRSFLPGSIARTHFGIEIDNPFLSDI 381 Query: 289 ARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGND 348 + Y L +E G S+ E +A+ G L + + +L+ Sbjct: 382 TQSYASLFTVCFTVSRYYEKYTGAMPSENEIAFIALQVGGALHRN--PMTVRAVLIGAAG 439 Query: 349 SEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLP-LFSPPLIYT 407 + I ++ + +S LI++ +Y Sbjct: 440 YATGSIIAGKIENRVPDVRIVSILSSDRIEHIDEY-DCDLILSTIDTRADIHKDMRFLYV 498 Query: 408 DLTLTTHQQEQIRKM 422 ++ ++ IR Sbjct: 499 SPLISAQDEKNIRNK 513 >UniRef50_C9A391 Transcriptional antiterminator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A391_ENTGA Length = 642 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 51/430 (11%), Positives = 134/430 (31%), Gaps = 27/430 (6%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + +R +LL L ++ +E + + D + ++ Sbjct: 68 FNNTETSVPETPTERTAYLLLRLISTEEALSVYDLAEELFISESTLLSDTKKLKKQCSE- 126 Query: 62 HQLTLTTG-YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 L + + ++ GT +R + L F+ + + + Sbjct: 127 --LAIEVRLTKDTLQLIGTEKAKRQLIHQTLLSELD--NHFVD----------MTKLQES 172 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 +D ++ ++ + + ++L + + Q + Sbjct: 173 FIDFDLDYIKEIIAELFSDYDFFTNDYALTNIVIHLAIAVDRMKGNFQSPEAEAQAPHSI 232 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR------DRQL 234 +++++I R P +E +A+L S D+ Sbjct: 233 HPTVLKISEKIAEKVAERYGIRFPKEEIRDLAILISANGTSVNFTQISPDELEKVTDKNC 292 Query: 235 RQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPR 294 +++++ EL + +E + H+ L R N + E + P Sbjct: 293 LDLVRKILAKVDELYFID-GNEPEFFIRFALHIKNLLYRINNGYSCRNPMTETLKKECPL 351 Query: 295 LVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLM-QENDLHEKQIILLTGNDSEREA 353 + + E G +S++E +A G L Q+ ++ +L + Sbjct: 352 IYDCAVQVSHVIQKEIGYTISEDEIAYIAFHLGYALEIQKQRTNKINCTILVPHYYNMNI 411 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 Q+ ++L++ L I+ ++ + LI++ + + + P + + T Sbjct: 412 QVMEKLQKNFSDDLEIQ--NILTSEKELQYVDTELIVSAVKLK-QVIATPYVTINPFFTL 468 Query: 414 HQQEQIRKML 423 ++QI + Sbjct: 469 EDRQQITAKI 478 >UniRef50_B0MBK6 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MBK6_9FIRM Length = 697 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 48/428 (11%), Positives = 135/428 (31%), Gaps = 27/428 (6%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 ++ LS +RR + T+AT ++ V D+ + + +R Sbjct: 75 LLEGDFYNYKLSRKERRQAASAMIVNSADYITLATIADHLFVSRATVINDLKDI-KAFIR 133 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 L + + + R+EG +R L + LR + + + ++ Sbjct: 134 EGNLNVISHANKGLRIEGAESEKRNFLLNLLRPSLSIYEN----------HKNVVAEHVS 183 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 D + +Q ++ +R +K + + LYL+ + ++ G + P Sbjct: 184 VQAGDSSVIQKILGEQEQRYKKYLDDSSFREIILYLRIMVNRNQMGEFLEPQPD-----T 238 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 + + A + ++ + D+ + + +R + + ++ ++ Sbjct: 239 NSENYMFALDTLKYISQYCDVVTTEDDIKYFSRFLDGVRYMNN-SRFSKNTVIIQMITRQ 297 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALN--RSLFAIGIDNTLPEEFARLYPRLVRT 298 ++ + + + L HL + + + E ++ Sbjct: 298 YISGISSELGIDLNADYDFFENLSNHLGSIFSAPPIDYQEV---DVINEVLEDNQDVLEA 354 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQ 357 + L++ E +AV A + ++ + ++I+ + + Sbjct: 355 VNNQMFVIYQYTERQLNEIEIKYIAVHVCAAIERKKNKEVAFRVIVACHAGIGTSRLLLE 414 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 +L+ + +S + P A +I+ PL S + Sbjct: 415 KLKRHFKFR-VVDVISAHEAMSIE-PNAADFVISTV--PLEGCSLEYVVVSAAFNDADYI 470 Query: 418 QIRKMLES 425 ++ +++ Sbjct: 471 RVGNRIDA 478 >UniRef50_C7TGH5 Transcription antiterminator, BglG family / PTS system, IIAB component n=4 Tax=Lactobacillus RepID=C7TGH5_LACRL Length = 689 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 57/422 (13%), Positives = 132/422 (31%), Gaps = 25/422 (5%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 VLS +R+ + L L + + V S D+ + +L QL + Sbjct: 84 SGYVLSNSERQLFLALLLACHKGYLALIHLQDYLQVSQSTISKDLRVLEQRLL-NFQLRI 142 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 YR+EG+ R + + + + + + ++ + + Sbjct: 143 HYDRRSGYRLEGSEDKIRSFMIKLVSKQLFKNHADLLTTCAQLIQQVDVSAKLTQ----- 197 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 ++ + + F + L + Q+ +S E++ Sbjct: 198 ------ISKLAHASEIDFVENRFLEFGYIFIFMLARLRIKKDYLPARAQKMNIQSTREYE 251 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 +A+ + + + ++ + L + + + DR + + V F Sbjct: 252 LAESLLNN-EGIHNITATE----YLTTIILCLSI--GGLENMRADRNIFSVTNQFVQRFS 304 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 ++ + F D + Q++TH R F I N L E+ Y + A+ F Sbjct: 305 DVSGIVFADNHKVTRQMFTHFRSMYYRLQFGYPITNPLTEQVIENYGEVFTLVAQAIQTF 364 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLM--QENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 E G + D+E + + +++ + +++ N A QL L Sbjct: 365 EDILG-KVPDDEIAFLTIHLISFIYTSDNSKNDYVTAVIVCPNGIGSSALAYLQLTSLFP 423 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPY-TMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 +K A LI + + L P ++ ++ + + + Sbjct: 424 NIKFLKPFRYADLDSH--LADADLIFSTFYRSELFAKGKPCFIIKPIMSAEEKYNLIQEV 481 Query: 424 ES 425 + Sbjct: 482 NT 483 >UniRef50_C9AYJ5 Transcriptional antiterminator n=4 Tax=Enterococcus RepID=C9AYJ5_ENTCA Length = 679 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 66/429 (15%), Positives = 136/429 (31%), Gaps = 25/429 (5%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 + S +RR I L F ++ F EL V + D+ E L Sbjct: 69 LFDVQKNALFFSEEERRSMIYLLTFSAVKDLSVYQFQELFYVSKNTILKDVKGIREE-LA 127 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 ++ L + +EG R F + + L Sbjct: 128 AFKIQLLYSRKYGFYLEGEEYQIRALAFRKVSTLSNTKNGNL----------LLFEGIYE 177 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 ++ ++ ++ + +L Y + + + Sbjct: 178 QDKTIYVQIRDRLSATLTDFNLVIVPSRFEEMLYFLNYLSFRMAETA-VSLAETEIPLLQ 236 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 S QV+Q+ E L++ +L + L + + Sbjct: 237 SLHVHQVSQQF---LAEFPDIKDRKTEELYVTILL---KTILQGDIEDTSLEFLLECASK 290 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 +++ L + F D + L + HL A R + ++N L EE Y L TR Sbjct: 291 IIHEMERLAAIEFVDYRTLLMNTFYHLVPAYFRIRYGFPLENVLIEEIKLQYNELFELTR 350 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH---EKQIILLTGNDSEREAQIEQ 357 AL E G + DEE G ++FG + ++ + +++ + +E Sbjct: 351 RALGSLEDLVG-TIPDEEIGYFTILFGGEISKQKAKRDYFQLNALVVCPSGISSSLILES 409 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 +L+EL + S++ + LI + + P + +T +++ Sbjct: 410 ELKELFPQIHFLPARSIEEYENVRFNEEIDLIFSSAPIKT---KRPCYVINPIMTPIEKD 466 Query: 418 QIRKMLESA 426 ++ K +++A Sbjct: 467 ELVKNVQAA 475 >UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G824_9ACTN Length = 470 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 96/287 (33%), Gaps = 6/287 (2%) Query: 142 KRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQ 201 + L +++ L++ + + + E++ A++I R Sbjct: 18 LTINAAAFQNLLVHIVIALIRISNDCYVPIEDSRLQRIVATSEYRAAEDIARRIDALTSI 77 Query: 202 PVPPDEPLFMALLFSMLR--VPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGL 259 +P +E ++A+ + + P + ++ Q + +++ + F ++ L Sbjct: 78 SLPQEEVAYIAIHLAGKQTIYQTPDESSLVISDEVWQVVSDMLDRVWRVFRFDFRNDLEL 137 Query: 260 CDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEES 319 L H+ R + + + N + ++ YP A YG LS +E Sbjct: 138 RMNLARHIQPLSVRLRYNLKLKNPMLDDIKARYPLSFSIAVDASTVIAEAYGAPLSHDEI 197 Query: 320 GLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELT-LLPLNIKHMSVKAF 377 G VA+ F L + +K I+++ + + +E Q R I+ Sbjct: 198 GYVALAFELALERSKTETVKKNILVICASGAGSARLLEYQCRREFGDYIDQIQTCDALGL 257 Query: 378 LQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + + L P+ L + E+ R +L Sbjct: 258 DKVDF-STIDYAFTTVPLNRELP-VPVREVSCFLDPVEAERTRAVLR 302 >UniRef50_A6LQT2 Transcriptional antiterminator, BglG n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQT2_CLOB8 Length = 674 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 58/434 (13%), Positives = 144/434 (33%), Gaps = 31/434 (7%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + L S + +R +I+L L + + +S L V + + D+ ++ Sbjct: 79 LNNLEYSSPKNKEERHNRIILELLKQEEPQKIYYYSSLLKVSEATINNDLDPVEEWFMKS 138 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 +TL +E + R ++ + + ++ Sbjct: 139 -NVTLIRKSGLGIYLEYEEEDYRKVCMRYIYQKTEDPLNRLS------------------ 179 Query: 122 NFYDDTNLQALVNLCSRRLQKRFES---RDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 N + + +++ + R L YL + G Sbjct: 180 NLVEANIVNKVIDSIKKVRDNRLSEVAESSYTELIAYLSITTKRIIEGRKNTKEKNINLT 239 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQ--LRQ 236 +S +++ E+ + L E + + + ++ + D + +R Sbjct: 240 LQSIKDYEFVIELVTLLSEQFLIEYTTTEIIDLYIYIKGAKLQHINENEDIFDTESDIRY 299 Query: 237 SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 + ++ + + + L H+ + R I I N E RLYP++ Sbjct: 300 VVYDMIQEYDSTLAYQIKQDTEFIRGLIAHIRPTIIRLQHGIEIQNPFQNEIKRLYPQIY 359 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH----EKQIILLTGNDSERE 352 A+ ES+Y + + +E GL+A+ FG ++ + + + + ++ + Sbjct: 360 EKAERAVKVIESKYNLKVPAQELGLLAIHFGGAEIRLQNNYKFSRKIDVGVICSSGIGIS 419 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLT 412 A + ++ + + +K +S L + ++++ + + F+ I + LT Sbjct: 420 ALLSSEISKFFKDEVRVKTLSFND-LSSDKIHDFEVLVSTFDLNDSQFN--YIKVNPMLT 476 Query: 413 THQQEQIRKMLESA 426 I +E A Sbjct: 477 EEDVLLISNEIEKA 490 Score = 54.8 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 63/228 (27%), Gaps = 7/228 (3%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R QIL L + +E + ++ L+ + L L T Sbjct: 6 RLIQILFLLLNSYKPIPAGSLAENLQISKRTIFRELEN-ADNYLKDYSLKLETKSKKGIS 64 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 + G+ N+ + + L P + + LK+ + +Y + L+ Sbjct: 65 IIGSKANK-NIVLNELNNLEYSSPKNKEERHNRIILELLKQEEPQKIYYYSSLLKVSEAT 123 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + L E + L + + GI ++ R +Q ++ Sbjct: 124 INNDLDPVEEWFMKSNVTL-----IRKSGLGIYLEYEEEDYRKVCMRYIYQKTEDPLNRL 178 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 + + + + L + KR++ Sbjct: 179 SNLVEANIVNKVIDSIKKVRDNRLSEVAESSYTELIAYLSITTKRIIE 226 >UniRef50_C3WG94 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WG94_FUSMR Length = 684 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 58/412 (14%), Positives = 140/412 (33%), Gaps = 13/412 (3%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 +S + + +I+L + E V + E RE L + L L T Sbjct: 81 ISTDEIKDEIVLFKTLFQEKLNLKDLGEELDVSRTTIKNIVREI-REKLEKYNLKLETEI 139 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + G N R +L + F S + L + + Sbjct: 140 QKGLILVGEEGNIRTAQLKFLNKYFNYFSSKHSEFIKKLLDEIFLLEYKEIS-------K 192 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 +++ Y+ + + G + + E+ + Sbjct: 193 KFIDILMEEKNILIADEPYLTFQNYICIMIWRLKNGKFLTK-MENENFFKRTAEYSQIKN 251 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + ++ + E L + L+ + + ++ K+++ +F Sbjct: 252 NIKIIEKNFNIFINDIEILKLTDLYLGSHNYCNESNFYNFWIEIDVLAKKIIENFSINME 311 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + ++ L + HL ++R +I ++N++ +F + Y + T+ +L+ E Sbjct: 312 IDLTKDKDLLYGIINHLKPTIHRLKNSISLENSILTDFLKNYKPIFEATKKSLSPLEDFI 371 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIK 370 G+ ++ +E + F + + + L EK+++++ G + QQL+ + +K Sbjct: 372 GMEITPDEIAFLGTHFKSAIDKNFSL-EKKVLIVCGFGYGTSKLLAQQLKNAYS--VFVK 428 Query: 371 HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + L+ LII + FS P++ + L+ + ++K Sbjct: 429 DIIPIYKLEEYDLDEIDLIITTLHLD-NSFSKPIVQVNTILSNEDKINLQKA 479 >UniRef50_C4L1U1 Transcriptional antiterminator, BglG n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L1U1_EXISA Length = 676 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 60/421 (14%), Positives = 140/421 (33%), Gaps = 19/421 (4%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 L+ ++ ++ R ++ L T + ++ V + D+ + R + Sbjct: 82 ILSAEAIPTSEDRLFELAWRLLFENDTLKLQAVAKQMHVSPSTLTQDLEKLDR-WFEEYH 140 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 L + RV G +R L + L + + + + Sbjct: 141 LEVERKKGVGARVLGYESEKRKLLINALLAHWDTLAFYRFVRGEDDYIPAFLKTVPCEEM 200 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 L+ + R +R + R I + + +G + R Sbjct: 201 L--EGLRDGYDYLKSRAFERMDDRTIMRVTFAYGVQQERLASGFFLEMYTKGRSEDY--- 255 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS-IKRLV 242 ++ + E ++ A + LR + +R + Q + +L+ Sbjct: 256 -----LKVATDMEAALGITYSMAERVWFAEEANRLRSIKDQMKEDEEERWIMQIRVHKLI 310 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAA 302 +H + F D+ L L H+ ++N + +T+ R YP L + A Sbjct: 311 HHVSLIYGFTFTDDTALERGLLAHILSSMN--TQVLPETSTVKPHIDRDYPGLRSAIQQA 368 Query: 303 LAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLREL 362 S+EE+ A+ F A L++ E + +++ + ++R+ Sbjct: 369 ADIVFGT--NTFSEEETVFWAMHFAAALVKPVRRREYRALVVCSAGLGSSKMLVNRVRQE 426 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 ++ + S+ Q +I++ +P S P + + LT+ + +++R + Sbjct: 427 FPEMQDVVNSSLFGLEQ-HRLEEYDVILSTVPLP--PLSVPTLIVNPLLTSEEVQRVRHL 483 Query: 423 L 423 L Sbjct: 484 L 484 Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 3/83 (3%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 +A +R ILL L + +A ++ + + + + IL+ +L L Sbjct: 3 HEWTARER--SILLHLLATETSTPLAEIAQAVNLSERTIQRE-RQLLEGILKEFELELAW 59 Query: 69 GYDGSYRVEGTVLNQRLCLFHWL 91 + G ++ + Sbjct: 60 QRGHGLSLVGKPSAKQQLREDLI 82 >UniRef50_C9A0D6 BglG family transcriptional antiterminator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A0D6_ENTGA Length = 698 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 59/420 (14%), Positives = 139/420 (33%), Gaps = 23/420 (5%) Query: 8 PSVLSAPQRRCQILLTLFQ-PGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 +++ +R+ I L LF ++ F V D+ + +E L +T+ Sbjct: 83 QYEMNSEERKKYIFLMLFYYESDYLSVNHFLSALRVGKTTFMADMKKLEKE-LSLSMITI 141 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 Y + G N R + F + + Sbjct: 142 GYTRKNGYGLIGNEENLRNFFMKMMFHDFGDNQEEFVYHY----------FLVNEKIDGF 191 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + ++ + + ++ L + + + + E+ Sbjct: 192 SQVEGIAREKLKTFSLELVENRLNEFSYLFTMILPRLNKQWQDFYETYNYQTFFQMKEYL 251 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 A+E+ L++ + + D + + + ++R++ F Sbjct: 252 FAKELLME----FGIT-NKSAQLYICGWLLGMALGDTTYPSADFSI-IHELVERIIKRFE 305 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 L +RF D+Q + +QLY+H A R F + I N L ++ Y L + + L Sbjct: 306 LLSGIRFKDKQKVINQLYSHFRPAYYRLFFQLPIINPLHKKIIEEYEDLYQIVQETLRPI 365 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLM--QENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 + + + ++E + + F + + E +++K +++ N A I +L+ + Sbjct: 366 GNLFERGIPEDEVSFLTIHFASLINDFDEYQVNQKIGVIVCPNGIGSSAMIYNELKMIFP 425 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYT-MPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + I + K L LI + L P+ + +T ++ Q+ + + Sbjct: 426 DIIFIGPIETKELL--LERPECDLIFTTVPNVSLYTLKKPVYVVNPIMTNEERNQLIQEV 483 >UniRef50_C7T7M7 Transcription antiterminator, BglG family / PTS system, IIAB component n=2 Tax=Lactobacillus rhamnosus RepID=C7T7M7_LACRG Length = 680 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 65/419 (15%), Positives = 137/419 (32%), Gaps = 34/419 (8%) Query: 8 PSVL-SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 P V +R I L L ++ + +GV S D+ L QL L Sbjct: 81 PYVYREEDERVLLICLYLLVSDEQLSLVHLYDFSGVSRTTTSADLKIVA-HFLERRQLAL 139 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 Y + G+ R L + + + + + + + Sbjct: 140 KYTRQAGYFIAGSEQIIRNLLNYLVTQLLKYDDGRGSIEQLSTVPP-------------- 185 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + ++ + FL L + + ++ + T + + EF Sbjct: 186 EQVIHFIHKIESVRHVTYSDESFSFLMLAVLMNVTRNLSQRTRDNHYFVHQ-INDTKEFS 244 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 + + + ++ L E ++ +L + D L +I+ +V+ F Sbjct: 245 LLKPL---IPKKWLVCDSDAE--WIVMLLLSANTIRG--EVGVADTDLVAAIRTMVSKFE 297 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFAR---LYPRLVRTTRAAL 303 + ++ D++ ++L HL A+ R + + + + + + LV T A + Sbjct: 298 QQTFIKIDDQKDFVNRLLAHLRPAIFRVRYGLHLHDIGIGQVMAADPRHQFLVDTINAIV 357 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREAQIEQQLRE 361 A E G + ++E L+A F L + DLH +++ ++ N + Q LR Sbjct: 358 APLEKLTGKPIPEDERNLIAFYFDGELEKSADLHANKERAAVVCTNGLIVSKLMIQNLRR 417 Query: 362 LTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 L + S + F L+ + L+ +Q Q+R Sbjct: 418 LFPEISFLSATSAREFEH--FSGDYDLVFTTVPLKTSARQ---YIIHPLLSEDEQMQLR 471 >UniRef50_C2FLI0 BglG family transcriptional antiterminator n=2 Tax=Lactobacillus plantarum RepID=C2FLI0_LACPL Length = 707 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 69/415 (16%), Positives = 146/415 (35%), Gaps = 20/415 (4%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 RR +LL LF T++ + GV + D+S +E L +++ L + Sbjct: 98 DRRNILLLALFVGERDITISQLMNITGVARNTVISDLSRVRKE-LGENRIELVGT-KDGH 155 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 + G L R Q + + G+ +T L ++ Sbjct: 156 SLRGQELTIRNYFQVHFTALIDGYDWVQKYQADNSFFAGKDTVGL------NTMLNDWMH 209 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQ-----FNPLQRRWAESCLEFQVAQ 189 L R+ ++ F I + Y + L + +G N RR + EF +A Sbjct: 210 LVERQSERAFSDDAIRMIEFYYAFVLKRILSGCFIPQDTFPSNIDDRRELRNKKEFGLAS 269 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPD-PLRDAHQRDRQLRQSIKRLVNHFREL 248 + E L++ L ++ + ++ ++ +V F+++ Sbjct: 270 NLLAQVGVEVGSH--DSEALYLESLLLSGQLHSVEPDERDNVKTKVYKAAIEVVESFQQI 327 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 FYD + L +LY HL R + + + + YP + T ++ FE Sbjct: 328 TGFSFYDRRQLTSELYVHLLSTYYRVKYHRQYRDGMVKAIEENYPDIYTYTELSIRPFEK 387 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 L++ E L+A+ FG+ + Q+ + H +L+ ++ QL Sbjct: 388 LNNYPLNENELSLIAIYFGSQMYQD-ESHLGSALLVCSTGLGTSRMLKVQLESAFKGLKF 446 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + ++ + + + + T+PL + ++ + + ++ K L Sbjct: 447 VGPITKRNYNSLTQISES---VVLSTIPLDKKNREVLVLHPIMNDREINELTKQL 498 >UniRef50_C0CS52 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CS52_9FIRM Length = 686 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 64/422 (15%), Positives = 158/422 (37%), Gaps = 12/422 (2%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 S +RR L+ + T+ ++ V + DI E ++ +++ Sbjct: 84 ESYFYSIEERRILELIFISLSTEVVTIEKMQKIFDVSKNTILTDIKEWKAALIGL-DISI 142 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 + Y ++G R + +++ P + + ++ L + Y + Sbjct: 143 VSTIKVGYVLQGEEFTIRKMIGKQIKKLENFQPKIVLGK---WMQESLAKISGEEYDYRE 199 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 + L+ + + S + F C + ++ G T N +R +Q Sbjct: 200 IA-RCLIKQYEQDENIKLVSENEEFECSMILVSWIRSMEGYTVVLNAEERAALAVTCPYQ 258 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 ++ + + +P E ++A L +++ + Q + + + L+ +F Sbjct: 259 SLKKSFQKL-KEYNLEIPNSEIYYIATLLLGIKIAQFVSQD-QENLYIYRFTASLLKNFE 316 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + + F + + L ++L H+ R + + N L ++ R+YP + T ++ Sbjct: 317 RIACIAFENRERLANRLRGHIRPLYYRLKYGMQSTNPLLKDVMRMYPEIYEFTERSVRAM 376 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQE----NDLHEKQIILLTGNDSEREAQIEQQLREL 362 E L+D+E +AV F + ++ ++ +I++L +++QL+EL Sbjct: 377 PDELAQTLTDDEIAYLAVYFISDEKKQVVTNTVENKSKILVLCAAGMATSTLVKEQLKEL 436 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 +I+ V + LI++ + I+T++ L + +I ++ Sbjct: 437 LGNIADIEVGIVSEAEKY-RLDNYTLIVSTSYSDILNQHRNTIFTEVVLQDKDKRKIIQL 495 Query: 423 LE 424 L Sbjct: 496 LN 497 >UniRef50_C9B288 Predicted protein n=2 Tax=Enterococcus casseliflavus RepID=C9B288_ENTCA Length = 488 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 61/432 (14%), Positives = 145/432 (33%), Gaps = 29/432 (6%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILR 60 + +RR I L L + + + + S DI+ E + Sbjct: 73 IENQETDQNDEPLERRHAIALHLLFKSPKRLMIKELFAPYYLSEAVISSDINRL-SEYFQ 131 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 Y +L L V GT N R C+ + +T ++ Sbjct: 132 YFELQLIRSDKR-ISVIGTEKNIRRCVNDLFTKTHVWNEEMVTQKYP------------- 177 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAG------ITPQFNPL 174 N +D + +++ R+L + +L +L+ G + Sbjct: 178 INAFDINFITSILEFIERKLANSIAYPYNMNIFSHLYILILRMREGEIDREEFIEGLDEE 237 Query: 175 QRRWAESCLE-FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQ 233 ++ E E +Q+AQ++ + +P E ++ RV + ++ Sbjct: 238 EQHLIEQHQEFYQIAQQVIEKINAYLVTELPESEVFYLYQYLVSSRVENKPLAMTNLTKE 297 Query: 234 LRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP 293 + + N + ++ + L H+ L R I + N L + YP Sbjct: 298 ASEITEFFTNQMEKALGIQLNQQTD-KTDLLCHIQPMLYRLKNKIIVKNGLLSDIQLEYP 356 Query: 294 RLVRTTRAALAGFESEYGV-HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSERE 352 R+ E YG +S++E G + + F + + ++++++ + Sbjct: 357 RIFEQVAQVSKEVEKTYGTNPISEDEIGFLVLYFVKF--KVIRRRRQRVLIMCSSGVGTS 414 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFLQ-TGAPRGAALIIAPYTMPLPLFSPPLIYTDLTL 411 ++ +++ + +S + + + + LI+ +P+ P I + Sbjct: 415 ELLKVKVQRAFPELDIVDVLSARMYRKHAQDYQNIDLILTTINLPVET-QVPTILVNSVF 473 Query: 412 TTHQQEQIRKML 423 T +++++++L Sbjct: 474 TKQDEKRVQQLL 485 >UniRef50_D2EIK0 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIK0_PEDAC Length = 700 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 65/418 (15%), Positives = 143/418 (34%), Gaps = 21/418 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L A RR ++ + T+A +E+ V + D + L+ + LT+ Sbjct: 87 LDAHSRRIFLIFLMLTESSFNTLAKMAEILEVSRNTIVHD-QKIITVFLKKYHLTVIGNR 145 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + + G ++ R L + I + K + I + ++ Sbjct: 146 K-GHFISGNEVDIRYFL--------QNNSVKIATVLAEVSKQKGDFDEIRSIMNLRSVIE 196 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPL-----QRRWAESCLEF 185 + + +R F L + L + G Q + + EF Sbjct: 197 SWLESIEQRSFLNFTDDGKKHLENFYMLVLNRILRGHILQSGEMFTSGMDYHHLQKQNEF 256 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSML-RVPDPLRDAHQRDRQLRQSIKRLVNH 244 +A+E+ +E F+ + + L++ K +V++ Sbjct: 257 MMAKELLTKLGLDLRAKY-EEEIYFLESMLLGTPKNEIGFSGESDVKNTLKKVTKEIVDN 315 Query: 245 FRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 F++L + +E L + LYTHL R + + L + Y + T+ +L Sbjct: 316 FKKLSGMNSNNESQLLNDLYTHLVSTFYRVKYNHQYRDGLVTQIKGKYFNVYTYTKMSLQ 375 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 FE HL++ E L+A+ FG+ ++++ + ++L+ +++++ Sbjct: 376 PFEKLNVGHLNENEISLIAIYFGSQMVRQ--AKQGTVLLVCSAGLGTSRLLKEEILAHFP 433 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 I ++ + LII + + +I LT ++K+ Sbjct: 434 DVNVIGPITKSEYNNI-QTDDYPLIITTTPLNSQPSNK-VILLSPILTQRDLILLQKL 489 >UniRef50_B0A6G9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6G9_9CLOT Length = 673 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 65/416 (15%), Positives = 148/416 (35%), Gaps = 23/416 (5%) Query: 13 APQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 +R +L + T+ +E V DI REIL + L L + Sbjct: 109 KDERILYLLDFFTEYNDVITIDQLAEQISVGRTTIVNDIKS-TREILNEYNLDLIKKQNF 167 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 ++G ++RL L +++ + S++ + + L ++ L+ Sbjct: 168 GMWLKGNEFDKRLLLINYIYK--DSKNDLKNSKYVNGVDARLLKQ-----------LKTK 214 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 + + ++ Y+ +++ G + S E+ ++Q+I Sbjct: 215 ILRLFKEDNFYATNQIFEETIKYILVQIVRIKNGNEIVEYDKRFDLLGSYDEYNLSQKIK 274 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLR---VPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + E L++ L + + + Q + ++++ Sbjct: 275 VIVEENFDTTLNEYETLYLTLPLVSGNAAPISKFMSNKPQLRENISDLMEKIFKEIYIRM 334 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + +Q L D L HL LNR LF I + N L E+ Y + + E+ Sbjct: 335 GI-IISDQTLRDNLGYHLEFTLNRLLFNIKLKNLLLEDMKENYVLPYNLAKISADVIENV 393 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQQLRELTLLPLN 368 Y + + ++E G +A+ FG++L + + ++ ++ I ++R++ + Sbjct: 394 YNLVMPEDEIGYIAIHFGSYLEKNIISNTLQKVAIVCSTGLGATNLITIRIRKIIGENVE 453 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT-HQQEQIRKML 423 I S+ + L+ + + S ++ D L + +I KM+ Sbjct: 454 IDTFSIFDIDKVN-LSQYDLVFTTSDIDINSNS--VLKIDTILDESKLRNKIEKMI 506 Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 83/306 (27%), Gaps = 42/306 (13%) Query: 21 LLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTV 80 +LTL + A + +E V I + E L + Y++E Sbjct: 30 ILTLCKNKEFANINHMAEELKVTTRSVRTYIKQL-NENLGEDIAQIIYVKGYGYKLE--- 85 Query: 81 LNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL-VNLCSRR 139 + F L + + L D + + V + Sbjct: 86 -IKNKEAFELLFEENKKISFDFNVKDERILYLLDFFTEYNDVITIDQLAEQISVGRTTIV 144 Query: 140 LQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRA 199 + ++ L L + + + G+ + N +R ++ ++ + Sbjct: 145 NDIKSTREILNEYNLDL---IKKQNFGMWLKGNEFDKRLLLINYIYKDSKNDLK------ 195 Query: 200 LQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGL 259 + R L+Q +++ F+E FY + Sbjct: 196 ----------------------NSKYVNGVDARLLKQLKTKILRLFKED---NFYATNQI 230 Query: 260 CDQLYTHLAQALNRSLFAIGIDNTLPE-EFARLYPRLVRTTRAALAGFESEYGVHLSDEE 318 ++ ++ + R I + Y ++ E + L++ E Sbjct: 231 FEETIKYILVQIVRIKNGNEIVEYDKRFDLLGSY-DEYNLSQKIKVIVEENFDTTLNEYE 289 Query: 319 SGLVAV 324 + + + Sbjct: 290 TLYLTL 295 >UniRef50_D1ARA3 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARA3_SEBTE Length = 712 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 68/420 (16%), Positives = 138/420 (32%), Gaps = 9/420 (2%) Query: 8 PSVLSAPQRRCQILLTLFQP-GLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 S +R I++ + T + GV + D+ EI + +L L Sbjct: 92 DYKFSERERTEFIVIRILFNTQEKLTTEKLAFELGVSELTIKKDLKILREEI-KDRELAL 150 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRR-GIARNFYD 125 + V G R + T LK E+K+ R D Sbjct: 151 QFDKKRGFLVTGDEEKIRQKQLKYYVDYNIGYSRNNTEAIPDFLKFEIKKILTDYRKNID 210 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 +L V S L + + L LY+ + + AG + P+ + E+ Sbjct: 211 TEDLYKYVENLSGSLDRIVSNEAHEVLVLYIMILVKRLQAGSHTEEKPVLNEYLLMTKEY 270 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 +V + + + +E L + + ++ + +++++N Sbjct: 271 EVISNSINELESKYKISIHKNEVLKIVDYLLGSHTYNFDYSFYENWVETEILVRKIINEV 330 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 + V ++ L + L H+ + R I + EE L+ +LA Sbjct: 331 DKYTEVEITKDELLFEGLLNHIKPTIYRIKNNIFFPGLVLEEIINTEKELLEIVGKSLAD 390 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELT 363 E+ G +S+ E+ L V F + + + K +I+L+ + QQL Sbjct: 391 LENYIGCKISNIETALFTVHFKLAIERAKEKQVKIYRILLVCSTGYATSNLLSQQLSAEY 450 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMP--LPLFSPPLIYTDLTLTTHQQEQIRK 421 + I + + LII+ + + + +I + L+ +E +R Sbjct: 451 --NIEIADLIPYYKVFDYDLSDIDLIISTIDIEEGIIKKNINIIKVGVVLSDSDRENLRN 508 >UniRef50_C5F6Y5 Predicted protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=C5F6Y5_LACPA Length = 693 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 67/427 (15%), Positives = 132/427 (30%), Gaps = 36/427 (8%) Query: 2 MPTLAPPSVL---SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREI 58 + P +R I L L ++ + +GV AS D+ Sbjct: 87 LQATEEPQPYVYREEEERILLICLYLLVSDELLSLVHIYDFSGVSRTTASADLKA-ATRF 145 Query: 59 LRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRG 118 L QL L Y +EG+ L R L + + + + + Sbjct: 146 LSTRQLKLKYTRQAGYFIEGSELAIRNLLNYLVTQLLKYDDG--------------RSSM 191 Query: 119 IARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRW 178 + V + FL L + + ++ + + + + Sbjct: 192 EQLGKLPTEQVIHFVREVENARNVTYSDESFSFLMLAVLMNVTRNLSHRVSDHHYFEHQ- 250 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 EF + + + L E ++ +L D D L ++I Sbjct: 251 ISDTEEFSALRPL---MPKAWLTNDSDAE--WLVILLLSANTIRG--DVGVADADLVKAI 303 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFA---RLYPRL 295 + +V F + ++ D+ +L HL A+ R + + + + + + L Sbjct: 304 QTMVAKFEQQTFIKITDQDDFVKRLLAHLRPAIFRVRYGLHLHDIGIGQVMAADSRHRFL 363 Query: 296 VRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLH--EKQIILLTGNDSEREA 353 V T A + E G + ++E L+A F L + DLH +++ ++ N Sbjct: 364 VDTINAIIEPLEKLTGKTIPEDERNLIAFYFDGELEKSADLHVSKERAAVVCTNGLIVSK 423 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 + Q LR L + S + F L+ + L+ Sbjct: 424 LMIQNLRRLFPEISFLSATSAREFEH--FSGDYDLVFTTVPLKTSARQ---YIIHPLLSG 478 Query: 414 HQQEQIR 420 +Q Q+R Sbjct: 479 DEQVQLR 485 >UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2S2_9FIRM Length = 632 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 59/416 (14%), Positives = 136/416 (32%), Gaps = 22/416 (5%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S R+ +L L + ++ + D+ E L + LTL + Sbjct: 89 SPENRKKYLLARLITENEYLNLYDLADEIYISPSSLRKDLKELKPT-LERYHLTLQHSHS 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 YR+ G + R CL + + + + + + +Q Sbjct: 148 SGYRITGKEKDIRRCLSK---------------EASISGIIDFLPQETMYKSSQLSLIQH 192 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ + L L++ + + N LE++ A +I Sbjct: 193 VIAESLMNANISITADSCSALSLHILIAINRVETNNLI--NQEVSEAMRQSLEYKTAIDI 250 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR--LVNHFRELG 249 R + +P E + A + + + ++ D I + + +L Sbjct: 251 NRSIEEIFHVSLPEAELCYFAFHINGKKKINADHESLSEDLPQDAVIFYNLFLRNILKLS 310 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + ++++ L L TH+ L+R + + + +P L+ + Sbjct: 311 KIDLFEDKDLRANLLTHIVPFLHRLDNNMQVTQSNLSSIRDEFPFANELAVCGLSFIPRK 370 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 YG+ +S+EE + L + + + I +++ + S I +L + +N Sbjct: 371 YGIAVSEEEIMYFTLHIALALERGPEARVKVNIAVISNDISSLFKLIAYRLNKTLADFIN 430 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + + L + +I+ + L F P + +L+ + +R ML Sbjct: 431 LIKLFDAKSLDAEELKKFDVILNATEVNL-RFDKPTLKIQPSLSENDLHILRLMLN 485 >UniRef50_UPI0001C35023 transcriptional antiterminator, BglG n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C35023 Length = 624 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 54/410 (13%), Positives = 120/410 (29%), Gaps = 11/410 (2%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R L L A+++ + V + D+ E H L L R Sbjct: 98 RMDLALNLLLYTDEPASLSDLAYKYYVSRSSITKDLKAVE-EFFSRHGLLLV-KAKKGAR 155 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +G N R L + + + + D ++ ++ Sbjct: 156 ADGPEQNIRKALTELIVMLLDASGKEAEEPAVES--DMMMTILDCFSEDDLICVEKILRR 213 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 R F+ + + + L + + G + + +A +I Sbjct: 214 IEERQNYYFDELEYGRVSVGLLVTIYRIREGFSIPPKETGEDGKHRGIYRDLAGKIADGL 273 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-DRQLRQSI-KRLVNHFRELGNVRF 253 + E MA L + D L D+ Q D +L + ++ F + V Sbjct: 274 TEDYGMEISATEQAAMAALLETTHLSDSLADSGQEADTELFDAFGSDFIDAFSVIMEVNL 333 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 +E GL + H+A L R N L + Y + + ++ + Sbjct: 334 REESGLYQNIMAHIALMLRRVKANTTARNPLTAQIMEEYMGTINVCQVICWILSRKFRLP 393 Query: 314 -LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 +S +E + + +++ + +++L++ + +L I Sbjct: 394 DISMDEICYLTLYIQGEILE--KEEKAKVLLVSNQQKGIVNLMRHKLLTRHSKWE-ITEC 450 Query: 373 SVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 S F + +++ + P + L+ + I + Sbjct: 451 SYYGFFEREQ-ETYDFVLSTLFLDPKECRIPYAFVSPMLSAEDWKHIEAI 499 Score = 40.9 bits (95), Expect = 0.081, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 79/314 (25%), Gaps = 37/314 (11%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R + + L + + + GV + D+ RE+ R + Sbjct: 3 ERHEKFIKLLIEKEQFIPLHICAGELGVSEKTLRRDMESLNRELERD-GAFIERRAGVGI 61 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVN 134 R+ + R F+ + S + Y D Sbjct: 62 RLNLDGAD-RAAFFNNM--ALWEAGKAERQGIVWDRNSRRMDLALNLLLYTDE------- 111 Query: 135 LCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 + + IT ++ ++ L A++ R Sbjct: 112 ------PASLSDLAYKYYV---------SRSSITKDLKAVEEFFSRHGLLLVKAKKGARA 156 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS-------IKRLVNHFRE 247 E + M L S +P ++ L +++++ E Sbjct: 157 DGPEQNIRKALTELIVMLLDASGKEAEEPAVESDMMMTILDCFSEDDLICVEKILRRIEE 216 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV-RTTRAALAGF 306 N F ++ ++ L + R I E + + G Sbjct: 217 RQNYYF--DELEYGRVSVGLLVTIYRIREGFSIPPKETGE-DGKHRGIYRDLAGKIADGL 273 Query: 307 ESEYGVHLSDEESG 320 +YG+ +S E Sbjct: 274 TEDYGMEISATEQA 287 >UniRef50_A8AYR4 Transcription antiterminator BglG family n=1 Tax=Streptococcus gordonii str. Challis RepID=A8AYR4_STRGC Length = 629 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 50/415 (12%), Positives = 126/415 (30%), Gaps = 19/415 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 + +R I+ L + + D+ + I + + L L Sbjct: 79 PQTPQERCIWIIKELLFNSRELNLYDLENRVFISGYSIENDLGRIKKMI-KDYHLNLKRS 137 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + + G +R L + + L + +D + Sbjct: 138 KNF-VELIGEENEKRKLYRKLLTDEVQGNFTN------------LNILANLFSDFDFLKI 184 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + + + + ++ + + +G + L LE+Q++Q Sbjct: 185 SDIFTETCYEYDYQIKESLFPIVMIHAGVAIERIISGNYAENIELPNESFTETLEYQLSQ 244 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + ++ +E + A+L ++R+ + ++ + Sbjct: 245 DFFARVEQGCQIHSVENEIIKFAILLCSSNSQQDFTQKK----EIREIVVAVLTKINDNF 300 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 ++ F D++ L L H++ + R + N E R YP + A Sbjct: 301 DINFSDDEALVSGLGNHISSLIERQKTNTSMSNVYLREIKRKYPLVFEMAVHAGEVLSER 360 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 G +S+ E +A+ GA + N + + +++ N+ ++ + I Sbjct: 361 LGKKVSENELSFIALHLGAAYDRVNSPSKYRAVVIIPNNQMLSKPFIDKINSRFEDRMTI 420 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + LII+ ++ + P + L + +I ++L Sbjct: 421 VFNYKIFDERQVRAISPDLIISTVSLKHQIK-IPTLQLSLLFDYEDESKIFQLLN 474 >UniRef50_D0DS13 BglG family transcriptional antiterminator n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DS13_LACFE Length = 498 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 61/423 (14%), Positives = 134/423 (31%), Gaps = 27/423 (6%) Query: 11 LSAPQRRCQILLTLFQPGL-TATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 L++ +RR ++ L +A V D + D+ +E+L+ + L L Sbjct: 84 LTSVERRNDVIKELLITSPGKHRIADLFHKYYVSDSVIFSDV-RVIKEMLQKYNLKLCKQ 142 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 D V G + R + L S + D + + Sbjct: 143 SDY-LWVGGEEVKVRYAINDLLV------------TDNVTNISHFLQSNKYIREQDASFV 189 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHH-----AGITPQFNPLQRRWAESCLE 184 +N+ +L L +L + ++ ++ + Sbjct: 190 TRQLNVIEEKLHSSIPYPYNVNLFSHLYILIERYRSVSNFMQTELSMTAEEKEKLRNDPR 249 Query: 185 -FQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 +V + + + R +P E ++ + RV +R L++ Sbjct: 250 VTEVCKLVMGNLSRYLNAELPSIEYYYLFQYLTSSRVNREDAPVGDVSGLVRSVTDFLID 309 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 E + Q L L H+ +NR I + N L ++ YP+L R + + Sbjct: 310 KVTENDPYQHIGSQKLFQNLSKHIYPLINRLENNIKVKNNLLKQIKLEYPQLFRIVKDST 369 Query: 304 AGFESEYGV-HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLREL 362 Y + + D E G + + F +++ ++ +L + Sbjct: 370 RQLSERYDLAQIDDAEVGFITLYFAEAAESTRP--PINAVVVCTTGFGTAQLLKAKLAKR 427 Query: 363 TLLPLNIKHMSVKAFLQ--TGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 ++ ++ + + + + LII+ +P P + LT QE++ Sbjct: 428 FSELNVVELIAKRDLAEEIENSAKPIDLIISTVNLP-ESIEVPTLVVSALLTMEDQERLE 486 Query: 421 KML 423 +M+ Sbjct: 487 RMI 489 >UniRef50_C0X3T6 BglG family transcriptional antiterminator n=22 Tax=Enterococcus faecalis RepID=C0X3T6_ENTFA Length = 669 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 61/418 (14%), Positives = 137/418 (32%), Gaps = 25/418 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +R+ I L + ++ + V DI + R L + L Sbjct: 71 YSETERQALIFLLTYSEIEELSVYHYQNFLDVSKGTILADIKKV-RHQLATENIALFYER 129 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + +EG R +WL R + AL L + +++ ++ Sbjct: 130 KRGFYLEGDEFRIRRFGKNWLARLLQQKSGTF------ALFCWLSQHQMSQY----AKMR 179 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 + L + Q + + + +L + + G + + +S + V++ Sbjct: 180 DGIQLAVQEAQLQLVPSRLDEISYFLAFSQKRL--GKYETVVWPENQLIQSLRAYPVSRR 237 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 I E LF+ + + L ++ L Sbjct: 238 ILSDL--VGPVANVETESLFLTICLMTA---LQGELRDTKLEFLLDISGEIIRKMELLAV 292 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 V+F + L +Y HL A R + + N L ++ + Y L ALA E Sbjct: 293 VQFEQPRELLMNVYYHLVPAYFRINYGFYLPNVLIKDIRQSYRSLYHLCEQALAPLEKLT 352 Query: 311 GVHLSDEESGLVAVIFGAWL---MQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + EE G ++FG + E + + +++ + ++ +LR L + Sbjct: 353 KRSIPSEEIGFFTILFGGEIFGQKNEQRQEKLKALIVCPSGISSSLILQSELRRLFPMIE 412 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 + +V+ + +I + + + + T +++ ++ Q+ ++S Sbjct: 413 FKETNAVREIENVSE-KSYDIIFSTVPIET---AKKVYLTKPIMSSLEKNQLMHQVQS 466 >UniRef50_A4VY33 Transcriptional antiterminator n=33 Tax=Streptococcus RepID=A4VY33_STRSY Length = 562 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 66/430 (15%), Positives = 144/430 (33%), Gaps = 11/430 (2%) Query: 1 MMPTL-APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREI- 58 ++ ++ + V+S P+R +L+ + T+ EL V + D++E ++ Sbjct: 76 LLDSIDSYTYVMSMPERIQLMLVYICITPERVTIERLMELTEVSRNTVLNDLNEIRTQLA 135 Query: 59 LRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRG 118 +++TL Y + LN+ + L F L + + Sbjct: 136 QEQYKMTLYVSKSHGYSLVCHPLNKIQYVHSLLYTIFLDANKGFLQVLEAKLFELVGCQL 195 Query: 119 IARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCL--LQHHAGITPQFNPLQR 176 + LQ V+ ++L K+ +I F+ L + L ++ + + + Sbjct: 196 LFSEEMAQ-FLQGQVSQLEKKLGKKINRYEIEFMLKVLPFLLLSYRNMELDDLEERAILK 254 Query: 177 RW--AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQL 234 + +E++VAQE+ + + E +A+L R + Q L Sbjct: 255 EFEQVRERIEYRVAQELKDALLQTFDLKLDEIEISLIAILLLSYRKDSDVHVFSQDFIDL 314 Query: 235 RQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPR 294 ++ ++R ++HF + L L H L R + I N + ++ Y Sbjct: 315 KRVVERFIHHFEIHSPFELENPDELAKHLLAHCKALLFRKTYGILSKNPMVQQIQDKYST 374 Query: 295 LVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQE--NDLHEKQIILLTGNDSERE 352 L TR + E E+ + LSD + + + G + + + + L+ + Sbjct: 375 LFAMTRVSGKILEEEWQIELSDGDIAYLTIHLGGAIRRSGTRKAQTQIVYLICDEGVSVQ 434 Query: 353 AQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLT 412 + +Q + + + F +I PL+ L Sbjct: 435 RLLYKQCQHHLPDKKIGAVFTTEQFKSVEDLLEVDFLITTSD--GLETDFPLVQVHPILD 492 Query: 413 THQQEQIRKM 422 + Sbjct: 493 FDDVLNMTHF 502 >UniRef50_A6NQL9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQL9_9BACE Length = 657 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 60/424 (14%), Positives = 135/424 (31%), Gaps = 14/424 (3%) Query: 8 PSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 +RR ++ L T+ ++ V + + D++ L+ + L +T Sbjct: 92 GQSFDNYERRLEVAKFLLSSHDDLTLQFLADQFYVSKGVINKDLTWV-SSWLKQYGLGIT 150 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY--- 124 + ++ G+ +R + + + Q ++ R + R + Sbjct: 151 RRQNCGVKICGSEQKRRTAMAGLITLSGKRLSEGQEEQMPLGDAIDVLRLDLKRFYTGLS 210 Query: 125 -----DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA 179 D + +++ ++ L ++L + + G + + Sbjct: 211 GKPKADVGEMAKIIHDAEKKYDFYLMDSYYTSLLVHLSIAVERLSGGQSVVDSDAYPESI 270 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK 239 E ++A+ I + +P E ++ + +PDP R ++ + Sbjct: 271 LEYREGEIAKYIAWRMEEAFHICIPNSERSYICIHLMGAELPDPGRQNEMHSSRINTFTR 330 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 + F ++ L L TH+ ++ R + L + Sbjct: 331 HFTAFVESMVGASFQQDEVLTTALATHIKTSVFRLQSGMAHHMHYTNRVPEKLKGLYQAI 390 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQL 359 A ++ + V +EE V + F L + +H + ++L D R + Q+L Sbjct: 391 WAGSYYYKHFFNVEPGEEEIYSVFLHFVHSLRR--RIHRCRTVVLYQCDILRADDVYQRL 448 Query: 360 RELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 L I+ + LIIA L P+I +T + QI Sbjct: 449 SMLGDELD-IQDIRSWGQRTDALVSDCELIIA-VGGELSAKC-PVIQVSTPITGKELNQI 505 Query: 420 RKML 423 R + Sbjct: 506 RDTV 509 Score = 81.4 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 97/350 (27%), Gaps = 56/350 (16%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT----LTTGYD 71 R +IL L + T+ ++ GV D+ L+ L L Sbjct: 8 RLFEILSLLLKIRRYVTLQELADKLGVSKRTIQHDVERVE-LWLKECGLENSATLLRKQG 66 Query: 72 GSYRVE--GT-VLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 R+E G + L RG + L S + Sbjct: 67 LGIRLELKGNAENDLEALLSSQSTRGQSFDNYERRLEVAKFLLSSHDDLTLQFLADQFYV 126 Query: 129 LQALVNL-------CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + ++N ++ + + G+ + +RR A + Sbjct: 127 SKGVINKDLTWVSSWLKQYGLGIT---------------RRQNCGVKICGSEQKRRTAMA 171 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRL 241 L + + + + D L + R L + D + ++ Sbjct: 172 GLITLSGKRLSEGQEEQMPLGDAID-----VLRLDLKRFYTGLSGKPKADV---GEMAKI 223 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV----- 296 ++ + FY L HL+ A+ R + ++ YP + Sbjct: 224 IHDAEKKY--DFYLMDSYYTSLLVHLSIAVERLSGGQSVVDS------DAYPESILEYRE 275 Query: 297 -RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLM----QENDLHEKQI 341 + E + + + + E + + + ++N++H +I Sbjct: 276 GEIAKYIAWRMEEAFHICIPNSERSYICIHLMGAELPDPGRQNEMHSSRI 325 >UniRef50_D1AWK7 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWK7_STRM9 Length = 628 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 57/428 (13%), Positives = 134/428 (31%), Gaps = 26/428 (6%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 + + + +++ +R+ ++ L + +E + S DI + + I+R Sbjct: 72 IFNSDSYKIPITSEERQIYLIDRLISEEGYIKLEDIAEKIYISVKTLSNDIKKIEK-IIR 130 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 + L ++ G LN R L L + F + Sbjct: 131 TYNLEFERKPYYGLKLVGEELNIRNFLIDVLEKRLNENKFF-----------------DS 173 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWA- 179 ++ YD ++ L R + + L + + A + +++ Sbjct: 174 KDRYDINSIAKLTYTFLRDKNVKISDISLQNLVAAIYVTFYRVEANKRIKSIDIEKNELF 233 Query: 180 --ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQS 237 + + + I + ++ ++ + F + ++ Sbjct: 234 LSKKTHILECMKYIYNELSH--NVDLDSNDIEYITIHFLTSETLTYKSLKTEDINEVNDI 291 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVR 297 I+ L+ + + + Y+++ L LYTH+ R F I I N L E+ + P Sbjct: 292 IQELIYYVKLTFKIDLYNDEELYKNLYTHILALCIRIRFGIKIKNPLLEDIKKNMPLEYN 351 Query: 298 TTRAALAGFESEYGVH-LSDEESGLVAVIFGAWL-MQENDLHEKQIILLTGNDSEREAQI 355 + LS+ E G +AVI + N ++K ++++ + + Sbjct: 352 VATYVCNLISKRFNKRSLSEAEIGFIAVILHMSKGININMSNKKNVLIVCPSGRGVSKFL 411 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 NI L +I + + + P+ + L Sbjct: 412 IYTYSNFFSEYTNIISSCGANELVDMDLGNVDIIFSLIDLDMK-IDKPVYKINYFLNDED 470 Query: 416 QEQIRKML 423 +I+ +L Sbjct: 471 ILRIKNIL 478 Score = 40.9 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 22/258 (8%), Positives = 64/258 (24%), Gaps = 54/258 (20%) Query: 88 FHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSR--------- 138 ++ ++ L + ++ + ++ Sbjct: 244 MKYIYNELSHNVDLDSNDIEYITIHFLTSETLTYKSLKTEDINEVNDIIQELIYYVKLTF 303 Query: 139 RLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRR 198 ++ + L ++ ++ GI + L+ LE+ VA + +R Sbjct: 304 KIDLYNDEELYKNLYTHILALCIRIRFGIKIKNPLLEDIKKNMPLEYNVATYVCNLISKR 363 Query: 199 ALQ-PVPPDEPLFMALLFSMLRVPDPLRDAHQR----------------------DRQLR 235 + + E F+A++ M + + + + Sbjct: 364 FNKRSLSEAEIGFIAVILHMSKGININMSNKKNVLIVCPSGRGVSKFLIYTYSNFFSEYT 423 Query: 236 QSIKRL------------VNHFRELGNVRFYDEQGLCDQLYTHLAQALN-----RSLFAI 278 I V+ L ++ ++ + + LN R + Sbjct: 424 NIISSCGANELVDMDLGNVDIIFSLIDLDMKIDKPVYK-----INYFLNDEDILRIKNIL 478 Query: 279 GIDNTLPEEFARLYPRLV 296 +N +E + Sbjct: 479 KDNNNYLKEIIPKSLFIY 496 >UniRef50_C7CWS4 Transcriptional antiterminator bglG n=39 Tax=Enterococcus RepID=C7CWS4_ENTFA Length = 677 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 79/417 (18%), Positives = 138/417 (33%), Gaps = 15/417 (3%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 LS R+ ILLTL Q +M F E + + DI + I R + L Sbjct: 83 ETQELSTLARQHAILLTLLQTKEPVSMHYFLETYCISNTTFYADIKQLETRIAR---IPL 139 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 T + Y V G+ +RL + + L F ++ T + + Sbjct: 140 TISRNQGYEVTGSEKYRRLLMANILSMEINEYQFFHFTELTTNDHFFFQFIHAEHLAFA- 198 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 Q +V L R + L L L + + AG + Sbjct: 199 ---QKIVQPEVETLFPALSDRKLQHLILMLTIAMDRVTAGFYL--ADETYTGQMNKAFLN 253 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFS-MLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 ++ + Q E +F A L S D D QL ++K+L+ Sbjct: 254 CSKRLFSKVAAETKQLYAVSEIVFFASLLSDFSNSFDEDFFDEHFDTQLAYAVKQLIEAV 313 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNR-SLFAIGIDNTLPEEFARLYPRLVRTTRAALA 304 + V F+++ L L THL+ +R L + N + E Y + R AL Sbjct: 314 SQETEVNFFEDTNLYKMLLTHLSGVFSRAVLQEEDLTNPILERIMNQYQEIAAALRQALP 373 Query: 305 GFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTL 364 +LS+EE + + F L + + E I + + + +E +LR Sbjct: 374 QI--FPQKNLSEEEIAYMVLHFANSLERSPKIMEVDIAGFSPSGLASTSMLEMRLRRYFP 431 Query: 365 LPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 I + + L+I+ +P ++ L + Q+++ Sbjct: 432 FINQIHFFRIADLGKVNVEENYDLVISTSLLP--GYNGKYKLISPLLLDDEIRQLKE 486 >UniRef50_D1AIW4 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AIW4_SEBTE Length = 703 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 52/412 (12%), Positives = 135/412 (32%), Gaps = 7/412 (1%) Query: 15 QRRCQILLTLFQP-GLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 +R I + + + + L V + DI + ++ L+ L+ Sbjct: 89 ERVEYIYIYILFNTSRKLNIINLASLFQVSELTIKSDIKKL-KDFLKSKDLSFRYNNIKG 147 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 + ++ + + R + + D L+ + Sbjct: 148 FYIDSSEIALRKEMIKIFMDKLFNFENTANKMNLFIDYQIKDILNNYIKQIDQNFLKNYL 207 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 +L + + L +Y +L+ + + + E+++ E Sbjct: 208 KDIESKLVENTSNEVFELLIIYFSIAILRINQNNIITQSDFYNTYIIRTKEYKILTENID 267 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRF 253 +++ +E L +A F + ++ ++ +++L+ + +V Sbjct: 268 ILEKKYDVHFNEEEILKLAEYFLGSHTYNYSYTFYENWIEVEILVRKLIGEVSKNCSVDI 327 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 ++ L + L H+ + R I + N EE L T + AL E G Sbjct: 328 SKDKLLFEGLLNHIKPTIYRIKNDIYLPNIGFEEILENCQELFFTVKNALIDVEKYIGHK 387 Query: 314 LSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 + D+E L V F + + + + ++ + G+ + + Q+L + +N+ Sbjct: 388 IKDDEVALFTVHFKLAIDRIKEKVNEFSNVLFVCGSGYASSSLLAQELLDTFD--INVVD 445 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLF-SPPLIYTDLTLTTHQQEQIRKM 422 + L+ + II+ +P + +I ++ L+ + + Sbjct: 446 LIPYYRLKDYNLKNIDFIISTVKIPETVKVEKEVIQVNVILSEKDKILLENK 497 >UniRef50_C9AU45 BglG family transcriptional antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9AU45_ENTCA Length = 688 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 63/415 (15%), Positives = 140/415 (33%), Gaps = 23/415 (5%) Query: 9 SVLSAPQRRCQILLTLFQ-PGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLT 67 +S+ +R I LTLF ++ F + + D+ + E L+ + ++++ Sbjct: 74 YEMSSKERGKYIFLTLFYYEKDYLSVNHFLDALKIGKTTFMSDLRKLQAE-LQGYDISIS 132 Query: 68 TGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDT 127 Y + G L R LF + +TS+ + + + Sbjct: 133 YSRKEGYHLAGDELMIRYALFRMILED-------VTSKDDDFIYRYFIHNERIQLADEQD 185 Query: 128 NLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQV 187 ++L + + L L + + E++ Sbjct: 186 T---YLSLLLEKHAIELVENRLIELNYILIFLYPRMGLNEFDLKPFSNDHELVKMKEYRF 242 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A+E+ + E ++ + ++ Q + + ++R+V F Sbjct: 243 AEEVLENAGVMNSI-----EKNYLCGWVLGM-ALGNEKEWLQGNLVIIDLVERIVERFEL 296 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 L +RF D+ + QLY+H R LF + I N + E+ Y L + + L Sbjct: 297 LSGIRFKDKHSVIKQLYSHFRPTYFRMLFRLPIINPMQEKIFEKYNDLYQIVKETLRPIS 356 Query: 308 SEYGVHLSDEESGLVAVIFGAWLM--QENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 + L DEE + + F + +E + +K +++ N A I +L+E+ Sbjct: 357 DSFDSKLPDEEVAFLTMHFALLIRNSEEYMVQQKVGVVVCPNGIGSSAIIYNELKEIFPS 416 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYT-MPLPLFSPPLIYTDLTLTTHQQEQI 419 + + + + +I L P+ + ++ ++ Q+ Sbjct: 417 FILLGPIETSELHSFD--QSYDIIFTTKPNFQLYPLKKPIFVVNPIMSYEERTQL 469 >UniRef50_A8UBU9 Transcription regulator, mannitol operon n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBU9_9LACT Length = 697 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 56/428 (13%), Positives = 142/428 (33%), Gaps = 15/428 (3%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 A P L+A QR+ +++ L M + + V D+ E+ + +++ Sbjct: 84 ASPEELTAQQRQSMLVIKLLMQEKEVKMESLAMDLQVSISTIQADLISIE-EVFKAYKID 142 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSF--ITSQFTPALKSELKRRGIARNF 123 + + + ++RL + + F + ++ K + Sbjct: 143 IERKKAKGIQAVASESSRRLIISGLIHSEINEYDFFQLMENETKGDAKEWEVSQNPFLKQ 202 Query: 124 YDDTNLQAL---VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFN--PLQRRW 178 +L + V + + L + L +++ G Sbjct: 203 LSKEDLYHVYAVVKQFGQHYFDEVTDSQLQRLVILLCISIMRLREGHQIHSFGATTLLAD 262 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVP-DPLRDAHQRDRQLRQS 237 ++ + A + Q+ + +E F+ L L VP + + D L Sbjct: 263 SDQTKSIETATAVYDFMQKLYGIAITKEEIQFLGLQIQGLNVPLRNDFLSEEYDTDLGYK 322 Query: 238 IKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIG-IDNTLPEEFARLYPRLV 296 ++ L+ + F ++ L L H++ A+ R++ + +N L E+ Y L Sbjct: 323 VRELIRLVSNELDWNFNQDETLFHDLLAHISAAIKRAIAPMPESNNPLLEKILMQYSDLS 382 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIE 356 + + L +H E + + F + ++ + E + +++ + +E Sbjct: 383 SSVKEKLTHIFPM--IHFLPNEIVYIVIHFASAFERQPKVQELKALVICSSGVGTAKILE 440 Query: 357 QQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQ 416 ++R+ I+ +S + L LI++ + + L ++ Sbjct: 441 SRIRKYIPEITTIE-ISRISKLHRIDFDEYDLILSTIFLQGFETEYKV--VTPLLMDNEI 497 Query: 417 EQIRKMLE 424 + I+ + Sbjct: 498 KSIQLYIR 505 Score = 55.2 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 105/320 (32%), Gaps = 32/320 (10%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R +I+ L + T+ S+ V + ++S L +Q+ L D Y Sbjct: 8 KREKEIIEVLLEQKNGVTVNYLSDELKVSNRTIYRELSSLEST-LAKYQIKLIRESDIGY 66 Query: 75 RVEGTVLNQRLCLFHWLRRGFRLCPSFIT--SQFTPALKSELKRRGIARNFYDDTNLQAL 132 R+ G LF L++ P +T + + + L + + +LQ Sbjct: 67 RLVGKP-----ALFKELQQHLSASPEELTAQQRQSMLVIKLLMQEKEVKMESLAMDLQVS 121 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 ++ L I + + + + A +Q +ES ++ I Sbjct: 122 ISTIQADL------ISIEEVFKAYKIDIERKKA------KGIQAVASESSRRLIISGLIH 169 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + +E A + + + P + + + + +K+ H+ + Sbjct: 170 SEINEYDFFQLMENETKGDAKEWEVSQNPFLKQLSKEDLYHVYAVVKQFGQHYFDEV--- 226 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDN----TLPEEFARLYPRLVRTTRAALAGFES 308 + L +L L ++ R I + TL + + + T A + Sbjct: 227 --TDSQL-QRLVILLCISIMRLREGHQIHSFGATTLLAD--SDQTKSIETATAVYDFMQK 281 Query: 309 EYGVHLSDEESGLVAVIFGA 328 YG+ ++ EE + + Sbjct: 282 LYGIAITKEEIQFLGLQIQG 301 >UniRef50_C4FVQ8 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FVQ8_9FIRM Length = 649 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 65/418 (15%), Positives = 133/418 (31%), Gaps = 19/418 (4%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S +R IL L T+ S+ V ++D+ + G+ + Y L L Sbjct: 86 PQSQEERLHYILKLLLADSQPQTLKDLSQDLYVSPQTLTMDLHQVGQLVGAYPDLDLEHD 145 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 ++++G +R L + F+ A+ E +A F Sbjct: 146 VK-GWQLKGPEFQKRRLYRELLTSELQGD--FLNLDKVLAIYEEFDMVWVAHYF------ 196 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 ++ + + L L++ + + AG E +A+ Sbjct: 197 ----QGLLKQADYQLRPASLPILLLHVGIAVQRMLAGQFLYHRQDLPPLV--PKEEALAR 250 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRD---RQLRQSIKRLVNHFR 246 + + ++ +P E + L + L L + ++ L H + Sbjct: 251 KFLQGVGKQYKCRIPASEAYSIGRLLEAYQAMHDLASQVIYQGRPLDLTRLVQDLGQHLQ 310 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 +L + F + D+ + HL + R + + + N ++ R YP + Sbjct: 311 DLVGLDFLSDADFKDRFHLHLQGLIERLHYQVELPNLFLQDMKRQYPLVFDLAVTVSTWL 370 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 + GV LS+ E GL+AV G+ + + + ILL +L+ Sbjct: 371 GARLGVVLSEAEIGLIAVHIGSSYSRLERPWKARAILLAPQHYPLMQSSIDRLKASFGHR 430 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 L I + L+I+ + F P + + + +L Sbjct: 431 LEILAQYDYVSEAQLLHQPVDLVISFMPL-AQSFGLPTLQVSTFFNEEDELALVSLLN 487 Score = 43.2 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 4/62 (6%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R+ Q+++ L Q + L GV D D+++ ++ + T + YR Sbjct: 13 RQEQLMVILAQSQGWLKGRDLAALLGVSDRTIRSDMNKLKQDYPG----AIQTHHHKGYR 68 Query: 76 VE 77 + Sbjct: 69 LV 70 >UniRef50_C3WAH3 PRD domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAH3_FUSMR Length = 691 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 64/414 (15%), Positives = 150/414 (36%), Gaps = 11/414 (2%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L +RR L + + SE+ V DI + E+L + Sbjct: 90 LDIYERREY-LSFICIFDEKINLTKASEILDVSRTTIRNDIRDIREELLNNNLEL-KISQ 147 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + G ++ R +LR+ +FI + + D ++ Sbjct: 148 QEGLILSGEEIDIRKQQLKFLRKY----SNFIFYSNVGLKTRKELIVEEYIKYVDINIIK 203 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 +N + L K + + +YL +++ G + +++ + E+ + Sbjct: 204 NFINYIQKLLNKIISDEAYNIIAIYLIITIIRIKQGKVLEK-IANKQFLKETAEYDTILK 262 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + + +E L + F + + + ++ +K+ +++F + + Sbjct: 263 AKGILESSYDIFLEENEILQITDYFLGSHTYNFEKSYYSNWVEIDILVKKFIDNFNKKID 322 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 V ++ L + L H+ + R I ++N++ E YP + T+ +L E Sbjct: 323 VDISKDKLLLEGLLNHIKPTIYRLQNKIKLENSIFVEVLNSYPNIFYNTKNSLKDIEKYL 382 Query: 311 GVHLSDEESGLVAVIFGAWLMQENDLHE--KQIILLTGNDSEREAQIEQQLRELTLLPLN 368 G+ S++E +A+ F + + + + K+++++ G + + QQL+E+ Sbjct: 383 GIEFSNDEVAFLAIYFKSAIDRNKYKRKNLKRVLVVCGYGYGTSSLLVQQLKEIY-TINI 441 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 +K + +T LII+ + FS P++ L + K Sbjct: 442 VKTIPRHLLEKTLQKEEVDLIISTVDID-SSFSIPVVKVKSILAQEDINNLDKY 494 >UniRef50_B6FXG1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FXG1_9CLOT Length = 641 Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 50/413 (12%), Positives = 134/413 (32%), Gaps = 25/413 (6%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S R I + L + + + + D+ + +EIL ++ + + Sbjct: 89 SPEDRVIFIAINLLIGNSKV--EELANMLSISKNTVVSDLKK-AKEILNNLRINVISKAY 145 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 +EG + R + + +L + I +++ Sbjct: 146 VGTCIEGDEEDVRYAFINLYYKISNADNY------------KLLKMIIDDFDSVKNDIEE 193 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ +L + L + + YC ++ ++ E EF+ Q Sbjct: 194 RIHKVENKLSLEYSDTSFKELIIIIMYCFMRMGEYSNFNYSEEYIHEKEQEEEFEAIQYA 253 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQ-LRQSIKRLVNHFRELGN 250 + E ++ F +V + D + R++ + Sbjct: 254 FA------DKTEDKKEICYLMKWFKSAKVMSFINDKSDVKMDGNKYLAMRIIEDMEKYTG 307 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 + + ++ + + H + A+ R I+N L E+ + + T + +ESE Sbjct: 308 IDYSNDFDFVNSVVMHFSVAMYRMQNNFKIENPLKEDIKMRLGIIYQITEDVMKKYESEI 367 Query: 311 GVHLSDEESGLVAVIFGAWLMQE-NDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNI 369 GV D+E +A+ FGA ++ ++ + + +++ + + ++ + Sbjct: 368 GVEFPDDEVSYMAMHFGAAFERKTQEIFDTKALIVCNSGLATAGLLSARMEVMLPQIQVE 427 Query: 370 KHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + + + +II+ P+ + + L +++K+ Sbjct: 428 GVCRLNNLEEELKNKDVDIIISTV--PIRNTDIEYVEVNPMLNIDDVLKLKKL 478 >UniRef50_B0NY60 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY60_9CLOT Length = 543 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 50/402 (12%), Positives = 136/402 (33%), Gaps = 27/402 (6%) Query: 31 ATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHW 90 T +E + + E E L + ++L YR++ R+ L + Sbjct: 1 MTTQKLAEKLFLSVPTMLKVLKECE-EWLEVYHISLVNERGKGYRLKSEENEYRVALKNL 59 Query: 91 LRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIH 150 + + + + D + ++ + F + Sbjct: 60 IMM-------------KKPGEEIKENIDYFFSNIDVSAIRKCIIQTENEWDYHFTDESFY 106 Query: 151 FLCLYLQYCLLQHHAGITP--QFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEP 208 + +Y + + + P + + + E+ I + ++ Sbjct: 107 EILIYCCIAYKRKELALPLVSDYFPEELKILKKYNEYAFTVAIFEKLEEVFHVHFLIEDV 166 Query: 209 LFMALLFSMLRVPD------PLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQ 262 LF+++ + L + D +L + R++ R++ +V ++ + + Sbjct: 167 LFLSIQILCSKFIGISDVDVTLSQVKKYDNKLVDFVDRMLKVIRDILDVDLTSDEKVKES 226 Query: 263 LYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLV 322 L HL + R + N L + + Y + R + A FE YG+ ++++E G + Sbjct: 227 LIIHLRPTIFRLRYGTPQKNALIDFIKKEYKNVFRASWAISILFEEYYGLQITEDEIGYI 286 Query: 323 AVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGA 382 + A + ++ H+ + ++++ + +++++++ IK +S+ F + Sbjct: 287 VLYIQAAIERKK--HQYRTVMVSNFNMGHTQLVKEKIKKSVPEIDEIKFVSIHDF-KIAD 343 Query: 383 PRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 +II+ ++ L +R L+ Sbjct: 344 YEDYDIIISTE--ERKEKDKRIVVIPNILNETGISTLRAHLD 383 >UniRef50_UPI000196A9D7 hypothetical protein CATMIT_00535 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196A9D7 Length = 624 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 58/421 (13%), Positives = 135/421 (32%), Gaps = 23/421 (5%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 T ++ +R I+ L + + V D+ R + Y Sbjct: 72 TTKSVIPQTSQERVSWIIKELLFKQE-INLIELQDRIYVSGYTIDNDLRNIRRILNEYPS 130 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 L + + R+EG +R H L + + I++ Sbjct: 131 LKVVRVKNH-IRLEGNENEKRSVYKHLLESEIKGNFTNISALSHLW------------KD 177 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 ++ ++ + +F++ + L ++ + + Q L Sbjct: 178 FNLIDVVEIFKNVCANNHYKFKNVSLPMLMMHAGIAIERIRNKNYL--YETQSDCTGIDL 235 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 E++V+++ ++ P +E + A L L+ Q Q ++ ++ Sbjct: 236 EYRVSKDFFEELSQKLGIPYVEEEVVKFAFLLEGRGSHVDLKAESQ------QLVEEVLL 289 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 ++ ++ F D++ L + L H+ L+R +E R YP + A Sbjct: 290 DIKDCFDIDFRDDEELYNSLVIHMQSLLDRIKVDKPNTTAYLKEIKRQYPLVFEMAIHAS 349 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 G L ++E +A+ FG + D + +++++ ++ ++ Sbjct: 350 DVISKATGKPLVEDEISYLALHFGTAYERHIDTQKYRVVMIIPHNQMLAKACMDKIETRF 409 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + I + A LI+ + L S + L + + QI + L Sbjct: 410 RERMEIIKVFPFFENNMIASLHPDLILTVVPLQHEL-SIKTVSISLFVNYEDESQIFQAL 468 Query: 424 E 424 Sbjct: 469 N 469 >UniRef50_C2JT03 Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JT03_LACRH Length = 598 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 70/424 (16%), Positives = 140/424 (33%), Gaps = 30/424 (7%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 +L + R+ IL L + S V + DI+ R +L Sbjct: 48 SLDSSKPTDSKSRKYAILAQLL-NDKHLSYQRLSSDYLVSRSSIANDIAFIKR-LLAKDN 105 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 + L + +EG ++ + + R + F Sbjct: 106 VALNFD-NTGTFIEGNEEEKQKIIKRVVATTLEGKHE----------------RSVLEMF 148 Query: 124 YDDTNLQALVNLCSRR---LQKRFESRDIHFLCLYLQYCLLQ--HHAGITPQFNPLQRRW 178 D + ++ + + L ++ + L + + +TP R Sbjct: 149 VDPSLIRIIRKTLVSKVHDLDLEVPENYLNDIILSTTVLISRGQVAKHLTPITASSLSRL 208 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 ++ V E+ ++ + DE +++ + + ++D + I Sbjct: 209 LLDLDKYPVVYELLESVEQAGIYKFSKDELRYLSYVVLGNGLRFFMQDGTIPIP-FERKI 267 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 L+ E N+ + L L HL Q + R + N L + + YP L Sbjct: 268 HALIETVSEKINLNLTKDVQLEGDLSLHLYQMVLRLQADTTVINPLLSDIKKNYPSLFGI 327 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQ 358 AL F +E + +SD+E V + F A + + ++I+ + N A + Q Sbjct: 328 VWYALVDFATENHLTISDDEISFVTIHFQAAIERSK--KRRRILFVCLNGIGTSALLSAQ 385 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQ 418 +R++ I+ +S + L ALII+ +P S P+ LT ++ Sbjct: 386 MRQILPDVSLIQIVS-RDALSQQDLSDVALIISTIPLP--KQSVPIATISPMLTADDMKK 442 Query: 419 IRKM 422 I Sbjct: 443 IMNK 446 >UniRef50_B2TIY2 Putative transcription antiterminator n=3 Tax=Clostridium botulinum RepID=B2TIY2_CLOBB Length = 654 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 65/416 (15%), Positives = 144/416 (34%), Gaps = 19/416 (4%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 + +R ++ L + T+ +E V D+ + + L + L L + Sbjct: 94 NPEERIDYLINRLVELNEIVTIDDLAEEMNVGRTTLVKDLKKV-DQKLDEYGLVLKRKTN 152 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++EG +N RL + + + + + S K +K LQ Sbjct: 153 SGIKIEGDEINLRLIILEHICKTYNDSIILLESNNILTKKEVIK-------------LQE 199 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + L + + I+ L Y+ L++ Q + + E+++ + I Sbjct: 200 QIVLNLKENKFSVTEALINNLIRYITVMLMRLKNDKNITSLQSQYKIIKESEEYEIGKTI 259 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDR--QLRQSIKRLVNHFRELG 249 + + + E +F+ + P + K++ + E Sbjct: 260 KSTIEALKDKKIDDLEIIFIVMPLLGRNAPLYHEVLRNLTIGENITLLRKQIFDKVFEFT 319 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + +++ L L HL ALNR + I N + +E Y + A + E + Sbjct: 320 GLSLEEDEQLIQGLEYHLYYALNRIVLNIKYKNPMLKEIKEKYKLPYEVAKIAASVIEDK 379 Query: 310 YGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTLLPL 367 Y V + D+E G +A+ FG ++ + K ++ G + +L+++ + Sbjct: 380 YQVQVEDDEVGYLALHFGTYVERAGKSFIKIENAAIICGTGLGTAKLLIIKLKKILGEEI 439 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 N K S F + A +I + + + T + + + +I + Sbjct: 440 NFKSFSDLDFTEEMA-SNYDMIFTLVDLDINTEIQIVKITSIFDESQLKGEIESQI 494 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 92/313 (29%), Gaps = 41/313 (13%) Query: 15 QRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSY 74 +R+ +L + + FS+ GV + + EI + + + + Y Sbjct: 7 ERKLFTILEMLADSKGNALKDFSDELGVSTRSIRTYLKQLQEEIPKEV-VEIVKTNNSEY 65 Query: 75 R--VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 + ++ ++L + ++ + + + ++ I + Sbjct: 66 KLNIKDDEKFKQLLELNRRQKQKFCQLNNPEERIDYLINRLVELNEIVTIDDLAEEMNVG 125 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHA-GITPQFNPLQRRWAESCLEFQVAQEI 191 + L+K + D + L L + GI + + + R I Sbjct: 126 RTTLVKDLKKVDQKLDEYGLV------LKRKTNSGIKIEGDEINLRLI-----------I 168 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 H + + E + +++ + +++V + +E Sbjct: 169 LEHICKTYNDSIILLE-----------------SNNILTKKEVIKLQEQIVLNLKEN--- 208 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 +F + L + L ++ L R I + + + + E+ Sbjct: 209 KFSVTEALINNLIRYITVMLMRLKNDKNITSLQSQYKIIKESEEYEIGKTIKSTIEALKD 268 Query: 312 VHLSDEESGLVAV 324 + D E + + Sbjct: 269 KKIDDLEIIFIVM 281 >UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D455_9CLOT Length = 639 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 58/401 (14%), Positives = 132/401 (32%), Gaps = 15/401 (3%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 A +R ++ L ++ V + D+ + R IL L L Sbjct: 90 YKVPQDANERIYYLIRKLLVVDYPLETGELADEIYVSEPTVVRDLQK-ARIILAKRNLKL 148 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 G+ R+EG+ LN+RL + + + + + L R+ + Sbjct: 149 VMEKKGNVRLEGSELNKRLAISEFFFHNEKHI-----GKEENVFRDGLNRQEV------- 196 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 ++ ++ L R + L +++ L ++ + + + +E+ Sbjct: 197 EGIRIILRLVCREFSIVLSDASLSNLVIHVFIALTRYRFYNFIEADEALQAEYRDAVEYA 256 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 A+ + + +P DE ++ A+ + R+ D + Q ++ Q I + Sbjct: 257 AAKRLTEALEEAYDFVIPDDEVIYYAMHLRVKRIYDEIPLTDQERVRINQCISQCFWEIY 316 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 E V F +Q L LY H+ + R + + Y ++ T Sbjct: 317 EEYGVDFSQDQELRHYLYQHIPLMIIRLKNHMSFRYPQVLDKPSSYLFSIKLTYIVTDVI 376 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLP 366 Y V ++ +E +A+ F L++ I + G +R L Sbjct: 377 GRFYQVGVNAQEFEYLAIYFCFALLKSRSGKRICIGVYNGGGRAETVMYFNAVRGAFLEE 436 Query: 367 L-NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIY 406 ++ + Q + ++ ++ P + ++ Sbjct: 437 DYEVRIVDYGDLFQRERGT-VDICVSTCSLEEPTGAEVVMI 476 >UniRef50_C5R8Q6 BglG family transcriptional antiterminator n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R8Q6_WEIPA Length = 464 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 57/414 (13%), Positives = 134/414 (32%), Gaps = 26/414 (6%) Query: 14 PQRRCQILLTLFQP-GLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDG 72 QR+ + + L E + + D+ ++L +++ Sbjct: 75 EQRQFDLAINLLHSFPHGLNRWHLLEKLYISESTLQRDL-SILNDMLHSFHISIDRSAGE 133 Query: 73 SYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQAL 132 +V GT + R L ++L T + L + D T + + Sbjct: 134 -AKVVGTEVQVRKALNYFLLENT----------VTQQVVEGLAGIFPDISKTDQTFISSQ 182 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 + L + L + +L L + P + L +VA+++ Sbjct: 183 MTLIEKELDVEILDPYTVNIFSHLYILLDRVRTHNVELATPTEINHHYDELLLRVARQVI 242 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + A + E + L LR L ++ + + RQ + L++ +V Sbjct: 243 NNISEYAHVEINSQEIENLMLYLVGLRYDRTLDNSQEDEA--RQLVDYLIHGLPLPPHVN 300 Query: 253 FYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGV 312 + L + L H+ ++R + I N + + Y + L Sbjct: 301 IEN---LRNALIGHVRPMIHRMKEDMLIVNPILNDIRFSYEETFSQVQQVL----QHTQY 353 Query: 313 HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 +S++E G + + L + + +K+++L+ ++ ++R + + Sbjct: 354 DVSEDEIGFLTLYVVRALEEASV--KKRVLLMCSTGIGTAQLLQTKVRRAFPDFDIVGTI 411 Query: 373 SVKAFL-QTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 S + + L+I+ + S P+I + ++ +ML Sbjct: 412 SARDYELHLKKFEQIDLVISTVAIHFQPAS-PVIQVSALFNESDRRKVEEMLYG 464 >UniRef50_C7T9J5 Transcription antiterminator BglG family protein n=1 Tax=Lactobacillus rhamnosus GG RepID=C7T9J5_LACRG Length = 494 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 55/428 (12%), Positives = 139/428 (32%), Gaps = 25/428 (5%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLT-ATMATFSELNGVDDDIASLDISETGREILRYHQL 64 + + +S R+ +++ L ++ E V D + D + L + L Sbjct: 79 SDVAEISPITRQEKVMEELLLASPKWLKLSQLYEDFYVRDSTIANDEKAINKR-LSNYNL 137 Query: 65 TLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFY 124 L + + ++ G R + L+ + ++ N + Sbjct: 138 KLARK-NRALQITGEEPEIRKAIVELLQ-----------TLDVVDIEDLKSTTNSELNQF 185 Query: 125 DDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHA-----GITPQFNPLQRRWA 179 D + + + L ++ L +L + + G ++ Sbjct: 186 DVALVTEQIGKIEKTLGEKVPYPYNVNLFSHLYILISRVKKVAVDTGDQKLTVQERQVMN 245 Query: 180 ESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIK 239 + ++A++ + + +P E ++ R+PD ++ + Sbjct: 246 DEPKIAKIAEKTIQSIGIYLNKQLPEVEQYYLFQYLISSRLPDQTSQVPNFSDEVTKVAD 305 Query: 240 RLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTT 299 ++ + N+ + +L H+ LNR I + N L E+ Y + + Sbjct: 306 FYLSKVGQRLNLAVNS-STIFHELANHVKPMLNRLRNGIRVKNVLLEQIKLSYQGVFKIV 364 Query: 300 RAALAGFESEYGVH-LSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQ 358 ++ + +SD+E+G + + F M E + +++ ++ + Sbjct: 365 TEVSKIVSKKFNLPVISDDENGFITLYF--ARMNEAHQLPIRTLVMCTTGIGTSELLKTK 422 Query: 359 LRELTLLPLNIKHMSVKAFLQT-GAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 L++ + ++ + + Q LII + + LTT Q Sbjct: 423 LKKHFPELEIVDVINTREYQQYLEKYPKVELIITTVGLK-EKVPIASLLVSAMLTTEDQA 481 Query: 418 QIRKMLES 425 +I+K +E Sbjct: 482 RIQKTIEG 489 >UniRef50_UPI0001C35E6F mannitol operon transcriptional antiterminator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35E6F Length = 695 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 75/419 (17%), Positives = 140/419 (33%), Gaps = 37/419 (8%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 + + +R I+ + + V + +D+ + L +QL L Sbjct: 88 DDYIFTPSERTRMIVCQIIVSREPVYVENLMNTCLVSRNTIFVDLQAVISQ-LHAYQLGL 146 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 Y ++G + R F + L+ L + + D+ Sbjct: 147 GYEKKRGYWIDGDPIRIRAIFFLYF----------------NMLEPLLSSGKLRFLYLDE 190 Query: 127 TNLQ-ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 + ++L + D+ L L + F + + E+ Sbjct: 191 MEFHLKQIEQVEKQLGVSYVRNDMLALAAMLPVMEKG---EDSLYFTDVSTEKVKVSKEY 247 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQ--RDRQLRQSIKRLVN 243 Q+ E + E ++++L F R+ R + + K L+ Sbjct: 248 QLVME--------YFPTLSDMEKVYLSLHFLGGRLESYSRTEADTGDNEFALEITKNLIT 299 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F V F ++ L LY H+A +L R F I I N + E+ R YP + TTRA + Sbjct: 300 EFEREACVLFERKEDLIRNLYRHIAASLYRYRFGIQIGNPMAEDIRREYPYIFDTTRAVV 359 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLM-QENDLHEKQIILLTGNDSEREAQIEQQLREL 362 E + GV +SD E +A+ FGA L E D E +I++ N I +L+ + Sbjct: 360 KYLEQQIGVLISDSEVAYLALHFGAHLEYAERDEKELRILVACMNGVATGNMISHELKRI 419 Query: 363 TLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 + M+ + +II + + + L ++ I Sbjct: 420 LPQARIVAVMAASEIVNPQNM--CDIIITSVHVKAVVPVI---VVNTILNDFDRKNILN 473 >UniRef50_D1AIK5 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AIK5_SEBTE Length = 698 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 59/426 (13%), Positives = 136/426 (31%), Gaps = 7/426 (1%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 M+ L +L +R + LTL + + V D E RE+ + Sbjct: 78 MLDFLKELEILLPYERMEILKLTLALDPNGLNINRLYKKLEVSRTTLKKDFDEVKRELFQ 137 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 L + G ++ G + +L + +L + + L Sbjct: 138 S-GLLVEQVKKGGLQISGEYEDIEKFRIKFLMKYLQLYLDNRPGKSFEKI--ILNMMKDI 194 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNP--LQRRW 178 + ++ + ++ L+ + Y+ +L + +G P + R+ Sbjct: 195 FRLNNPGLVKKFIKNVAKNLEIIISDEPFGIIASYMLIVILNNKSGKENLQEPAVTEERF 254 Query: 179 AESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 + E++ + + + L +A L D ++ ++ Sbjct: 255 LKETDEYRSIIKHISEIEMAEEIKFKNTQILKLADLVLGSNSFHIENDFYESWIEIDLLA 314 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 K+L+N+ + +++ L L HL + R + I N + E Sbjct: 315 KKLINNMNQKIEADISNDEILFRCLIHHLKPTIYRIKKGVRIVNPIFENMKIKKDDFYYY 374 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQ 358 + A E G + ++E L+ + F A + + H K+I+L+ + Q Sbjct: 375 VKDAAKELEKMLGQEIPEDELFLLIIHFKASIERNRPKHVKKILLVCSLGYGTATLLAQN 434 Query: 359 LRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPL--FSPPLIYTDLTLTTHQQ 416 +R+ + + +G LII + + P++ + T Sbjct: 435 IRDTYEVEIMEILPYYALRESIKEYKGIDLIITTVDIKESKKPKNVPVVKINPIFTLDDI 494 Query: 417 EQIRKM 422 + + + Sbjct: 495 KILNEA 500 >UniRef50_B0P4U6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P4U6_9CLOT Length = 640 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 63/416 (15%), Positives = 139/416 (33%), Gaps = 22/416 (5%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 S +R I + L T T+ ++ V + D++ + Y+ +TL Sbjct: 83 EYSRDERAVVIAMMLILTDKT-TIEQLADQMEVSKNTLVEDLNSVE-ALFEYYGITLERK 140 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + G R +F+ + + + + + +D Sbjct: 141 SYYGLTISGDEEKIRNMVFNIYLKITKQKTINLDEIIKEYTVIKEEIPEEIIYKIEDNE- 199 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + ++ + L + L + G + R E FQ+ + Sbjct: 200 -----------RIKYSDDSVKELKNMILITLNRAFDGFYMGADTGYLRGREKPDNFQIIE 248 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR-DAHQRDRQLRQSIKRLVNHFREL 248 EI + + V + L+M +L + + + + DR++ + + L+ F + Sbjct: 249 EILKREE----IQVTEGDILYMIMLLNASKKIKGISLEDTIEDRKIMMATQSLIQEFCRI 304 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 + Q + Q+ HL A+ R I I+N L E+ + T+ L +E+ Sbjct: 305 TKIDMKIGQDISTQIMMHLKVAIYRLKNHIEIENPLMEDIKYSSLFVYEITKKILREYEA 364 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + V + E + F + +++ +I++ + ++Q+L + Sbjct: 365 MFDVVFPETEIAYTTMYFETLFQENYNMNFTVNVIVVCNSGLSTAVLLKQRLHMIVPELN 424 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I V ++ II+ PL + +I + L IR+ L Sbjct: 425 VISTCRVSDVIKEAENINPDFIISTV--PLKMNQYKVIEVNPLLNAEDVNVIRRNL 478 Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 24/240 (10%), Positives = 60/240 (25%), Gaps = 21/240 (8%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R+ ++L L + T +E + D+ + + + R Sbjct: 5 RQIELLKYLEKREEYTTTKELAEEFSISSRTIRNDLDAIEYST-KDLPIKIERTPRLGIR 63 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 +E +L + + + + D T ++ L + Sbjct: 64 LE------------FLEKVGLDSILYTNDMKEYSRDERAVVIAMMLILTDKTTIEQLADQ 111 Query: 136 CSRRLQKRFES-RDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRH 194 E + L Y L + + + + + I Sbjct: 112 MEVSKNTLVEDLNSVEALFEYYGITLER-KSYYGLTISGDEE------KIRNMVFNIYLK 164 Query: 195 WQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFY 254 ++ + + + + + ++R + S+K L N N F Sbjct: 165 ITKQKTINLDEIIKEYTVIKEEIPEEIIYKIEDNERIKYSDDSVKELKNMILITLNRAFD 224 >UniRef50_D1AH38 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH38_SEBTE Length = 683 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 62/415 (14%), Positives = 132/415 (31%), Gaps = 16/415 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R I +F T +++ + V DI E E + + + Sbjct: 85 SKEERIRYI-KLIFLSEETVNISSLARSLDVSRTTVRADIKEITAEFSSDNVIVIDNK-- 141 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + + N R + + L + ++ T L + + T L+ Sbjct: 142 --LYL--SEKNIRNLILKYFHE--DLIQFYYYNKETMDKNMLLDYFYPYISDLNITYLKQ 195 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 ++ +L+ + + + + + Q + + E+ + E Sbjct: 196 FIDDILIKLKNNANNFHEYTFTYLILLYI-RVKNNKKIQKVE-NESFLYNTGEYHIIAEE 253 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + + +E L + + + IK L+N + Sbjct: 254 LEKLETKIKIKFSKEERLLLCDYILGFLSYSYNTSIFEYWIKTEVIIKNLINKVNTHTQI 313 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 ++ L L +H+ + R + +++ + E YP L + AL E G Sbjct: 314 NISGDEELLSSLLSHIKPTIYRLKNNLAVEDDIYIEAVEAYPELFNIIKNALFELEELIG 373 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 + D E L + F A L + + K++IL+ G + Q+++ I Sbjct: 374 KKIPDSEIALFTLHFLASLERNKENKRKKVILICGGGYGTSMLVAGQIKQNY-NLEIIDT 432 Query: 372 MSVKAFLQTGAPRGAALIIAPYTMPLPLF---SPPLIYTDLTLTTHQQEQIRKML 423 +S FL L+I + PLI T + Q+++ + L Sbjct: 433 ISYMQFLDYDI-SNIDLVITTLKLRKDAKRHIEIPLIKISPFFTYNDQKKLSRFL 486 >UniRef50_B9DT71 Transcriptional regulator (Antiterminator) n=1 Tax=Streptococcus uberis 0140J RepID=B9DT71_STRU0 Length = 617 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 58/414 (14%), Positives = 136/414 (32%), Gaps = 34/414 (8%) Query: 17 RCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRV 76 + ++ L T+ S + + + + + +L+ + L++ ++ Sbjct: 87 QDELFRFLLDMEDYQTIDDISAQLYISRSVLTNYLKKIE-ALLKLYDLSIDRKPHYGIKI 145 Query: 77 EGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLC 136 G+ N+R C+ T L R I + L + + Sbjct: 146 IGSEANKRTCI------------------QTNNLYPLDDRDLIRK-------LMDYIIVG 180 Query: 137 SRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQ 196 +++ Q + L Y+ + + + R+ + ++ + Sbjct: 181 NQKYQVYMSEVAMEALINYIMISISRIKHHFPIEQIKTDRQEISQASQ-KIISDYINFIF 239 Query: 197 RRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR---DRQLRQSIKRLVNHFRELGNVRF 253 + E ++AL F+ + L Q+ Q +++ +L N+ F Sbjct: 240 KETKVYFNQYERDYLALQFTSKLASNSLSKFGPNFIISSQIDQLTFEMLDRVYKLLNLDF 299 Query: 254 YDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVH 313 + L L HL R + I ++N L E+ + YP A+ Y Sbjct: 300 RNNLELRMALSQHLVPMDIRLRYNIMLENPLSEQIQKEYPFPYTIASTAVTVLNEFYQKD 359 Query: 314 LSDEESGLVAVIFGAWLM-QENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHM 372 +S E +A+IF + D+ +K I+L+ + + + + + +N + Sbjct: 360 ISQGEMAYIALIFALATEKRNRDIAKKNILLVCISGTSSSQLFKYKYLQAFGDYINKVYE 419 Query: 373 SVKAFLQTGAPR--GAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 S + L + I + + P+ +L + T+ ++ E Sbjct: 420 SSVSDLDFFDFKGNHIDYIFTTVPLS-KKYPIPIYEINLFIDTNDILTYKQFFE 472 >UniRef50_C2BXP0 Transcription antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BXP0_LISGR Length = 637 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 52/416 (12%), Positives = 149/416 (35%), Gaps = 27/416 (6%) Query: 15 QRRCQILLTLFQPG-LTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 R+ +ILL L + + ++ + + DI + +E + + + Sbjct: 78 DRKSRILLELLKKSADGIDIYELADNLFISESTLKADIQQMKKEFTAK-NIQIIFE-KDT 135 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 ++ GT +R + L S + + +++ + + LQ ++ Sbjct: 136 VKLVGTERAKRRYMISLLY-----DESNLQEKLKASIQQMI-------GYISLAALQEMI 183 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR 193 + + R ++ + L+ + + G + + + E+++A+EI Sbjct: 184 RMVFAGHEIRINQYTLNNIVLHYAISIERIRQGHIIKKQTDNQDFQT-KREYELAKEIAD 242 Query: 194 HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-----DRQLRQSIKRLVNHFREL 248 E +ALLF ++ +++ D ++ ++ ++ ++ Sbjct: 243 KLAEEYAIDFSEGELEQLALLFIGIQNETSANSKNKQLKEVVDEKIITALHDVLKQVKKT 302 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 + D+Q ++L H+ +RS + N+ + YP + + + + Sbjct: 303 YLIELGDDQEFFNKLAIHVQSLYHRSKYDTFARNSSLLDLKTAYPLIYDISVYISSLIQE 362 Query: 309 EYGVHLSDEESGLVAVIFGAWL-MQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 + + +++E +A+ G++L Q+N + + ++L+ + + I +L + Sbjct: 363 KLAIWFNEDEISFIALHIGSFLGTQKNSIEQASLLLVANDYHDLSENIVAKLENTFGEQI 422 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 IK + + +++ + I+ L + +I K + Sbjct: 423 FIKTAN----EAAIKAQSYDMLLTT-DHSIAERYERAIFIQPLLHQNDLRKIEKRI 473 >UniRef50_D0BLL7 PRD domain-containing protein n=2 Tax=Granulicatella RepID=D0BLL7_9LACT Length = 650 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 135/415 (32%), Gaps = 23/415 (5%) Query: 9 SVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTT 68 S R +++ LF + FSE V D I + I + L Sbjct: 87 ESFSPEYREKELIRKLFITHEKVDLYEFSEEMFVTDSTIHRLIDKL-NSIFISFDVKLKI 145 Query: 69 GYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTN 128 D ++G N R L +F + K + + D N Sbjct: 146 KRDE-IILKGNERNIRKAL------------EIFIVKFVSNDRDRFKNLELFFSKEDINN 192 Query: 129 LQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLE-FQV 187 Q + S + Q F ++ L L ++ A + LE + Sbjct: 193 CQKSIVKLSEKYQFHFTDEYLYSLLLDCLIFKKRNEANEILTNRLSNLVNDVNHLEVYFF 252 Query: 188 AQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRE 247 A E+ L+ + P E MA + + + + + +K L+ Sbjct: 253 AGELLETILNFTLEKISPYEIEAMAYNLLAFGFN---IQSVEYMKNVNEQVKTLIQKVSN 309 Query: 248 LGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFE 307 L ++ ++ L L H+++ + R I N EE + Y L ++ Sbjct: 310 LLSLNLTTDEHLQMMLSAHISKMIIRLRNQNFISNPALEEIKKQYSSLFNVIWLSIRTLS 369 Query: 308 SEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 Y + + +EE + + F + + + I+++ N I +LR + Sbjct: 370 QYYELSIPNEELAFIVIHFQVAIEKI--MKPLNIVVICQNGIATSELIMNKLRRIFSSNE 427 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + +S++ R L+I+ +P + P+I +T + I++ Sbjct: 428 KLTTISLRELDFYD-LRNIDLVISTIGLP--ELNIPVIEVSPIITKEELRMIQQF 479 >UniRef50_B1CBL8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBL8_9FIRM Length = 694 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 56/427 (13%), Positives = 133/427 (31%), Gaps = 10/427 (2%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 + LS+ +R I+L L + + EL V + RE L+ Sbjct: 78 LFNLNFYEYYLSSKEREDLIILILLVQDMPLKSSQLEELLFVSKTTLVNTMENV-REKLK 136 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIA 120 + + + ++ + +R LF+ L + L +F F P S + + Sbjct: 137 GYGVGFSRNKHYGLVLDCDEIKRRDVLFYIL-KDMGLADTFPWETFIPNACSGFISKFLK 195 Query: 121 RNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE 180 + Y ++ + + + + L L + + Q Sbjct: 196 IDKYR-YKIERSLQSAENQFHLNMNDTCFYEMTLILCVIFFRIENNHYISYEKCQDYLEG 254 Query: 181 SCLEFQVAQEIGRHWQRRA--LQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSI 238 S + + + + +E ++A ++ + Q + Sbjct: 255 SFEPNGLVINLCEYIYKNLFDKYLYNENEVQYLACKLCKMQFIMESSNKGQ-YANFHIIV 313 Query: 239 KRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRT 298 K L+ ++ N+ + L + L H+ +R + N E Y Sbjct: 314 KSLLYQLSKVYNINLLTDYKLHEYLTGHILSVFHRIKDGNYLVNPFKNELIEEYYEDFTI 373 Query: 299 TRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQIEQ 357 + + E+ SD+E + + L++ + + K +I+ + Sbjct: 374 LKNNIYILENGLACKFSDDEISYILMHILTALIKNSKKYNKIDVIISCNAGIGTSEFLAT 433 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 +++ + + S + + LII+ PL + P + + L+ Sbjct: 434 LVKKNFNVN-IVAVTSAHSLKAFLLRQRCDLIISTV--PLNEINIPWVQVNTVLSKDDFS 490 Query: 418 QIRKMLE 424 IR+ ++ Sbjct: 491 NIRESID 497 >UniRef50_A4VZ09 Transcriptional antiterminator n=9 Tax=Lactobacillales RepID=A4VZ09_STRS2 Length = 680 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 57/416 (13%), Positives = 133/416 (31%), Gaps = 22/416 (5%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 LS +R+ I L F + + EL V + DI +E+ Q+ L Sbjct: 85 LSQEERQLLIYLYTFIRKEFVSNVHYQELLSVSRNTTLTDIKNV-KELCLDFQVRLEYTR 143 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 Y + G ++ + L + + LKS + I L+ Sbjct: 144 AKGYHLIGREEDKHRLALYALSNCLQSSIGVWALDYI--LKSWGEENPI-------EELK 194 Query: 131 ALVNLCSRRLQKR-FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + + E R +L + + Q G +N + ++ + Sbjct: 195 IVSQQACNYYKVSALEERLDEYLYFLIFLFIRQARVGNRINWNFEGKGGFVKDFLQRLWK 254 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELG 249 + + + + +++ L ++ ++D +V L Sbjct: 255 LL--RLKSTSTLELNAATQEYLSHLLQGCL----EGESGEKDDLFYHLTVEIVEEMERLS 308 Query: 250 NVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESE 309 + F + + L HL A R + N+ E + L + AL E Sbjct: 309 LITFEHRSEMIEGLQRHLIPAYYRLTSRLVNVNSYTETIKEEHADLFYLVKKALRPLEEH 368 Query: 310 YGVHLSDEESGLVAVIFGAWLMQ-ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 G + D E + FG ++ + + + +++ N +++ LR+L Sbjct: 369 LGFTIPDSEVSYFVIHFGGYIEAGQQRSYRYRALVVCPNGVSSSLIVKENLRQLFPNIYF 428 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 S++ + + ++ + + L P +T++ ++++ ++ Sbjct: 429 ADTHSLQDW-KMLDMTDYDMVFGTIKLNIEL---PFFLVSQLMTSNHKKELFHLVN 480 >UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAW7_9FIRM Length = 642 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 61/411 (14%), Positives = 128/411 (31%), Gaps = 23/411 (5%) Query: 16 RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYR 75 R +ILL L ++ + + D+ + E+L QL L + Sbjct: 96 RISKILLLLLNRHRAVSVMELEDKLYISRSTLQNDLKKVE-EVLEKFQLELLKSSNK-VM 153 Query: 76 VEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNL 135 ++G +N+R CL + ++ ++ Sbjct: 154 IDGYEINKRRCLAEQDLYLAHIKNEQGMVYIDER---------------QLAKIKNILTD 198 Query: 136 CSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHW 195 + D + L+L + + G Q L E+++A+ + Sbjct: 199 IFVNYKYHIMDTDFNNAILFLNIMICRMGEGFYIQPGELDISEQLG-NEYEIAKAVFGKI 257 Query: 196 QRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYD 255 RR VP +E + +L RD+ +++ I R V F D Sbjct: 258 SRRFFIKVPDEEIRYFSLYLKG---QGNNRDSDTITQEMDNFISEAFEEIRRNFGVDFTD 314 Query: 256 EQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLS 315 L L H R + + + N + +P +YG +S Sbjct: 315 NINLRITLALHCMSLSIRIKYDMQVKNDMLNYIRETFPLGYDIGAYFAFLLHQQYGKRVS 374 Query: 316 DEESGLVAVIFGAWLMQENDLH-EKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSV 374 ++E L+AV F + L++ N K+I++++ + ++Q L + +++ Sbjct: 375 EDEVALLAVHFYSSLLELNSRQGNKRILVISALKNSMTLLMKQTLLKWFSEYVSVIDFVN 434 Query: 375 KAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLES 425 + + + +Y D H I+ ++ Sbjct: 435 PMDVTEDMLDEYDIFLTTEKEEFFEKGL-AMYVDTFPNQHDYMNIKLNIDG 484 >UniRef50_C7TGF2 Transcription antiterminator BglG family protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TGF2_LACRL Length = 488 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 56/420 (13%), Positives = 139/420 (33%), Gaps = 27/420 (6%) Query: 13 APQRRCQILLTLFQP-GLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 +R+ ++L L +A +E V + + DIS L+ + L++ + Sbjct: 83 PAERQKKMLKRLLLAAPSELKVAQLAEDFYVSESVIQSDISSLES-WLQRYDLSVKRI-N 140 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + ++G + R L + G + T L + + Sbjct: 141 RTLHIQGEEKDIRDALMEAIL-GLSKDTTMNFQAMTQGLAEHDTTFALKQ---------- 189 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE-----SCLEFQ 186 V++ S+ L+ L ++ + + + + + Sbjct: 190 -VDVVSQVLKADLPYPYDVNLFSHIYVLINRIRKFVKLPIEDEDITRLKAKVHNYPDLYS 248 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 V++ + + + +PV +E ++ R + L++ Sbjct: 249 VSEIVKHNLENYLGEPVAENEVYYLFQYLISARFTGSDFKTKAGTSAYT-FAEALIDKVA 307 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 + + + + ++L H+A LNR I + N L +E YPR+ ++ A A Sbjct: 308 KDIQLP-DNTGAMVEELVPHVAPMLNRLENNIRLPNALLKEIQDEYPRVYQSVLLATASL 366 Query: 307 ESEYGV-HLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 Y + +S +E G +++ ++ K+ +++ I ++R+ Sbjct: 367 AKAYHLPEISADEVGFLSLYIAKYMESSK--RPKKALVICTTGLGSSELISAKIRKDLPD 424 Query: 366 PLNIKHMSVKAFLQTGAP-RGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + +S + A ++I+ +P P + T + ++ + L Sbjct: 425 LEILDIISNLNLEKALARHPDVDILISTINLP-KQKHIPQVLVSAMFTVQDKNKVEEALR 483 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 35/322 (10%), Positives = 78/322 (24%), Gaps = 65/322 (20%) Query: 22 LTLFQ-PGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTV 80 + L Q T + V +S +T+ Y+++ Sbjct: 10 IHLLQDQQGFLTSNELARELKVSSKTIQRVVSRINTAYGNN---IITSEKGRGYKLDYE- 65 Query: 81 LNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELK--------RRGIARNFYDDTNLQAL 132 L L S + LK L + + ++ +Q+ Sbjct: 66 ----RFLLSKLSGKSSADHSLPAERQKKMLKRLLLAAPSELKVAQLAEDFYVSESVIQSD 121 Query: 133 VNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIG 192 ++ LQ+ + + + + Q R A E Sbjct: 122 ISSLESWLQRY-------------DLSVKRINRTLHIQGEEKDIRDAL--------MEAI 160 Query: 193 RHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVR 252 + + H L+Q V+ ++ Sbjct: 161 LGLSKDTTMNF---------------QAMTQGLAEHDTTFALKQ-----VDVVSQVLKAD 200 Query: 253 FYDEQGLCDQLYTHLAQALNRSLF--AIGIDNTLPEEFARL---YPRLVRTTRAALAGFE 307 + L++H+ +NR + I++ YP L + E Sbjct: 201 LPYPYDV--NLFSHIYVLINRIRKFVKLPIEDEDITRLKAKVHNYPDLYSVSEIVKHNLE 258 Query: 308 SEYGVHLSDEESGLVAVIFGAW 329 + G +++ E + + Sbjct: 259 NYLGEPVAENEVYYLFQYLISA 280 >UniRef50_Q67QV8 Transcription antiterminator BglG family n=1 Tax=Symbiobacterium thermophilum RepID=Q67QV8_SYMTH Length = 642 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 71/423 (16%), Positives = 136/423 (32%), Gaps = 27/423 (6%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 L R I L + +E V D D+++ RE LR L + Sbjct: 75 DLKPEDRVSLIARRLVSSRGSVNFYDLAEELCVSDATLERDLTKV-REALRPFALKVFRE 133 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 D + G +R + H L S ++ S T Sbjct: 134 SDQ-ILIAGMERQKRKYISHLL------------SSDQQSVLSVALDEFFEGTVDRYTEF 180 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 + +R + + ++L L + G + N + E++VA Sbjct: 181 ERYARGLLKRFGIYADDYGFRNIVIHLVVTLERVANGESITEN-VPLSTLRDRKEYEVAL 239 Query: 190 EIGRHWQRRALQPVPPDEPLFMAL------LFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 IG + + + E ++AL ++ P + + K + Sbjct: 240 CIGEYVRENYGVVLTDAELYYVALTISTNSNLLKYKLITPTNIREYIEEKYILLAKMALR 299 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 + + + Q H+ + R+L + N L +F YP + Sbjct: 300 RLEDTFYLE-PFDDDFVIQFTIHIRNLIQRALTGSHVKNPLVGKFKTTYPLIYDMAVLVA 358 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQEN-DLHEKQIILLTGNDSEREAQIEQQLREL 362 G+H+ D+E +A GA+L Q D + + + + ++++ Sbjct: 359 NQLREIEGIHVPDDEIVFIAFHIGAYLEQNKADRGRINTLFVYADYHNMHEPVLTKIQQA 418 Query: 363 TLLPLNIK-HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRK 421 LNI + V+ F AP LII+ + P++Y ++ T + IR+ Sbjct: 419 LDQDLNIVAAVPVREF--AFAPYDCQLIISTVP-ETVVEGLPVVYVNVFPTEADLKVIRR 475 Query: 422 MLE 424 +E Sbjct: 476 KIE 478 >UniRef50_B0M974 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M974_9FIRM Length = 652 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 68/426 (15%), Positives = 126/426 (29%), Gaps = 23/426 (5%) Query: 8 PSVLSAPQRRCQILLTLFQPGL--TATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 L+ +R + + L Q + E V I + + Sbjct: 83 DVPLTPQERMRALGIRLLQADEEKPEDVDELEEEMFVSRTTLESGIFKIKAMLESRTTPM 142 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 G +R L + I + Sbjct: 143 YVKRNGRKIWTYGEEETRRFLLKELMVDRTDPDYLMIENY------------DDYFGADI 190 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 + V + + DI L +YL L + H G N + + + Sbjct: 191 PEKMMNCVLNALADNEISMTAEDILHLVIYLSIKLTRVHMG-YEYKNKTKDILTSEDINW 249 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDA----HQRDRQLRQSIKRL 241 +A+ I + + +E + +A+ S+ R+ + + L Sbjct: 250 TLAETISGKVREEFSTELNEEELVDLAVQLSLFRLIGSEAEVRPAPIPEQSHYEFVVNEL 309 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 +N + ++ D+Q L L TH+ L R N + YP + + Sbjct: 310 LNDIKNKFHLDLTDDQELKAGLVTHIRYTLKRIRMEPESTNPVLMLLKTEYPFVFDMSLF 369 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQ---IILLTGNDSEREAQIEQQ 358 F +GV L++ E G VA G+ + + + I ++TG + + + Sbjct: 370 LYERFYDVFGVRLNENELGYVATYLGSAVERMERKKSPKDFTIAVVTGMNYGTSRLLTTR 429 Query: 359 LRELTLLPLNIK-HMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 L+ + NI+ S+ A + + LI L F P I L Q Sbjct: 430 LKAIYGDICNIEGPFSIYAVNEIEKLKPTFLITTESKQVLKNFQVPKIQISPLLNEKDQR 489 Query: 418 QIRKML 423 +I K L Sbjct: 490 EINKWL 495 >UniRef50_A5Z3Q0 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3Q0_9FIRM Length = 652 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 47/417 (11%), Positives = 131/417 (31%), Gaps = 13/417 (3%) Query: 10 VLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTG 69 V+S QR I+ L T T++ FSE V + S DI+ +E + + + + Sbjct: 85 VMSKEQRMSYIMYILLSGWDTYTLSLFSEELNVSKKVISDDINSIFKEFSK-YNIRINRV 143 Query: 70 YDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNL 129 + G + R + + + + + + + Sbjct: 144 AGHGVFITGDEFSIRRAMKSYC-KYSIGNKVIREASDNRISVEDQELWINNFGQDNFEKS 202 Query: 130 QALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQ 189 +++ + L YL L + G + + + + Sbjct: 203 VEVIHYIEETYGIAYTDYSFKMLADYLCIQLFRVRMGNVITEDIIPEDE--NIKYSDIVD 260 Query: 190 EIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLR----DAHQRDRQLRQSIKRLVNHF 245 ++ + + + E ++ +L + V + ++ + ++ ++ + Sbjct: 261 KVVEKFCSLSKCNLNEYEKQYIEILLASASVQSNTDLYKAISSDKEEKAKKISGEMLEYL 320 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 E+ N+ + L + + +L R+ + I N + +Y + T Sbjct: 321 SEILNIDLTSNELLKISMENFVPSSLIRTRYGIEATNPFLGDIREMYSGIFATCFTLTRF 380 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 +E G +D E +A+ G L + + + ++L + + +++ Sbjct: 381 YEKYCGAIPTDHEISFLALFVGGALHRN--VKTIRAVILGTSGIAASTIVARKIESRIEE 438 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + +S I T+ + +++ ++ ++ I+ Sbjct: 439 IKIVAILSS---ELMDTIDQYDCDIVLSTISSFEYEDKVVHISPIISAEDEKNIKSK 492 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 49/378 (12%), Positives = 107/378 (28%), Gaps = 45/378 (11%) Query: 15 QRRCQILLTLFQPGL-TATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGS 73 +R QI+ L + T T + GV + I E + H + L Sbjct: 4 ERGLQIVDKLIENNRTPITSKTLAIYLGVSERSVKTYIKEV-SDFCNEHSMILERKPGIG 62 Query: 74 YRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALV 133 + + T + R + + + + L L Sbjct: 63 FVADFTDQQI-KQVADLKRDKKIVMSK--EQRMSYIMYILLSGWDTYTLSLFSEELNVSK 119 Query: 134 NLCSRRLQKRFESRDIHFLCLYLQYCLLQHH-AGITPQFNPLQ-RRWAESCLEFQVAQEI 191 + S + F+ + + + + G+ + RR +S ++ + ++ Sbjct: 120 KVISDDINSIFKEFSKYNIR------INRVAGHGVFITGDEFSIRRAMKSYCKYSIGNKV 173 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 R V E L + + + ++++ E + Sbjct: 174 IRE-ASDNRISVEDQE-----LWINNFGQDNFEKSV------------EVIHYIEETYGI 215 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLP---EEFARLYPRLVRTTRAALAGFES 308 + D L +L L R I + E + F S Sbjct: 216 AYTDYS--FKMLADYLCIQLFRVRMGNVITEDIIPEDENIKYS-----DIVDKVVEKFCS 268 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 +L++ E + ++ + +Q N K I + + E+ +I ++ E LN Sbjct: 269 LSKCNLNEYEKQYIEILLASASVQSNTDLYKAI---SSDKEEKAKKISGEMLEYLSEILN 325 Query: 369 IKHMSVKAFLQTGAPRGA 386 I ++ L+ Sbjct: 326 ID-LTSNELLKISMENFV 342 >UniRef50_C2C385 BglG family transcriptional antiterminator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C385_LISGR Length = 678 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 63/421 (14%), Positives = 136/421 (32%), Gaps = 23/421 (5%) Query: 7 PPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTL 66 + +R I L F ++ + V + DI RE L +++ L Sbjct: 72 EAAYFDEKERIMLIYLLTFSRYKELSVFHYQSFLNVSKNTILSDIKNLRRE-LAAYEVKL 130 Query: 67 TTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDD 126 G + + G R FHW+ + + T Q + + A +F Sbjct: 131 EYGRKEGFFLSGDEWTIRRLGFHWINKLVE--TTAGTWQLSKWIH--------AHDFNRY 180 Query: 127 TNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQ 186 T ++ + + Y+ + + S Q Sbjct: 181 TTIRTQIETAMDNKAINMIPGRLEGFYGYMCLIIERMAESPLSIEQEHYLGRVMSTHIHQ 240 Query: 187 VAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFR 246 +A+++ + + E F+ +L L + L +++ Sbjct: 241 IAEDLLA--STGLAESICQKEAAFITILLLTL---TQGQIEEPAFDFLLHCASQMIQELE 295 Query: 247 ELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGF 306 ++F D + L ++ HL A R + + I+ R YP + T AAL+ Sbjct: 296 RRSAIQFEDYRKLLLDVFNHLVPAYFRIYYDLEIEQPFLTTIERDYPEISAITEAALSPL 355 Query: 307 ESEYGVHLSDEESGLVAVIFGAWLMQENDLHE---KQIILLTGNDSEREAQIEQQLRELT 363 E G +S E ++FGA + + + + +++ N +E +L+ L Sbjct: 356 EKLVGKPISKGEKAYFTLLFGAAIKNQQEKEKTEQLHALIVCPNGISTSMIMEAELKRLF 415 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 + H ++ ++ + LI + + PL + ++ + K + Sbjct: 416 PTIIFHTHYALSE-MERVSLDSYDLIFSSVAFD---SAKPLFLIRPIMEQTEKNHLVKKV 471 Query: 424 E 424 + Sbjct: 472 Q 472 >UniRef50_Q03C88 Transcriptional antiterminator and PTS system component IIA n=9 Tax=Lactobacillus RepID=Q03C88_LACC3 Length = 698 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 63/415 (15%), Positives = 136/415 (32%), Gaps = 18/415 (4%) Query: 11 LSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 L+ QR +LL L Q + E + D+ + L + LTLTT Sbjct: 86 LTPEQRAVYLLLDLLQATQPVYLVDEQEKMQISKSSMDSDLRNLRAD-LAKYNLTLTTSP 144 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 ++EG + R L R L + + + D T ++ Sbjct: 145 KLGAQIEGNERSIRTMFGDVLTRQHALVTLIAQQLIASGM--YVDKMKEVFTKQDVTYIR 202 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQE 190 L+ C + + + L L + +G + + + + E Sbjct: 203 DLLRRCFPKGALAANDMYSQQVTVLLIIWLHRVRSGHYVKDDET--AVDLNKENAKFLNE 260 Query: 191 IGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGN 250 + +H+ + E ++ L + + Q+ L++H Sbjct: 261 LIQHYALQIDV---ASELGYVGFLINSFNRRGAIDLDDWVKAQIFSVA--LIDHMETEIG 315 Query: 251 VRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEY 310 F + L ++LY H+ R + + N L + + Y + Y Sbjct: 316 FPFSKNEKLFEELYNHMTALFKRLSQHVKVVNPLRKTIQQGYGPIYDAIDRFFKT--GRY 373 Query: 311 GVHLSDEESGLVAVIFGA--WLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLN 368 + +SD+E +A+ F A ++ ++ Q ++ + + +L E N Sbjct: 374 QLTMSDDEKAFLAMYFSATQAEDRQRQDYQYQAAVVCNFGTATGRVLAAKLEERF----N 429 Query: 369 IKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423 I ++V + + G R + + T+ +P+ P + + + ++ L Sbjct: 430 IDVLAVLSTSEVGILRKLPVSLVFKTVDMPIDKIPSLKVNPIPSEVDLTRVAAFL 484 >UniRef50_C5ERF8 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERF8_9FIRM Length = 633 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 65/390 (16%), Positives = 128/390 (32%), Gaps = 22/390 (5%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + + P+R I L TM ++ V + D+ + R +L + L Sbjct: 88 SDRIPDTGPERVEYIAGKLLALDYYITMEELRQILYVSRSTLNQDMRQVRR-LLELYGLK 146 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + R++GT R C+ R + TP Sbjct: 147 VVHASHKGIRLQGTETALRRCMAELFFRN------EGKWEKTPGTGP---------GEER 191 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 + +Q ++ + L + + L L + + +F+ + + Sbjct: 192 ISQIQHILKSRADALCVSYPEAVVRELALQIYIAAQRCRFRKEVEFDSSLQVSRQFMD-- 249 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHF 245 +A IG + +P E MA + + + D + I+R+ Sbjct: 250 -MAVSIGDGLRETMGISMPDIEIHNMACML---QFRSLEEETGPEDDRFDGVIRRMFQRI 305 Query: 246 RELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAG 305 E +RF ++ L L HL + R I I+N + + YP V A+ Sbjct: 306 EEKFGLRFSGQEQLAHYLKLHLPRMAQRCRNRILIENPVLNDTFCNYPLAVDVANVAVQV 365 Query: 306 FESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLL 365 E E + ++ E G +AV F ++ + K +IL+ +L+ L Sbjct: 366 LEQELDIKVNSNEFGYLAVYFNMCIVTYGERQNKTLILVCPGSRAESVMYFTELQALFGN 425 Query: 366 PLNIKHMSVKAFLQTGAPRGAALIIAPYTM 395 +N L++ G +I++ + Sbjct: 426 YVNTLLTCRVDELKSMKFTGNEVIVSTVPL 455 >UniRef50_B0NYU6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYU6_9CLOT Length = 640 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 60/417 (14%), Positives = 136/417 (32%), Gaps = 38/417 (9%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S+ R + L SE V D++ + I + + L + + Sbjct: 90 SSHTRMAYMFWQLMHAEEPYLTDDLSEEMKVARTTTISDLNRLRKAIEK-YDLKIKGKAN 148 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 + G RL + + NF ++ Sbjct: 149 TGLALCGDEYKIRLFILENIYEQL------------------------YLNFPLGQIIRE 184 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + RL ++ F + + + +G T + + + + E Sbjct: 185 KLYDFQERL--SMDALGFGFFYRFFVVMIQRMESGHTIKKLEPKYEELYGSSAYMIVDEF 242 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR---DRQLRQSIKRLVNHFREL 248 ++ + +E LF+++ + +R P + Q+ + I +++ + Sbjct: 243 LNEIEQVKGYKISKEERLFLSISVAGMRTPANTAEIEQKISISEGVADLIIEILDRIKAE 302 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 NV + L D H+ +NR + I N + ++F Y + A E Sbjct: 303 LNVTVVANE-LFDDFVYHVFFMINRLKYGFHIYNPMVDDFKNKYSVAYKMAEIAKGVLEE 361 Query: 309 EYGVHLSDEESGLVAVIFGAW-LMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPL 367 G+ ++++E G +A FG + L QE + +I ++ G+ IE QL+++ + Sbjct: 362 RVGIEMTEDEMGFLAAYFGVFLLEQEPEEKRCKIAIVCGSGKIIGRLIENQLKKVFDVEP 421 Query: 368 NIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 + I+ + + +P + ++ +E I++ E Sbjct: 422 EFEFF--YGIFDENRKDDFDYIVTTTELHMDTKTPVIFMDEVF----DREYIQRKFE 472 >UniRef50_D1AKT2 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AKT2_SEBTE Length = 678 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 61/412 (14%), Positives = 131/412 (31%), Gaps = 14/412 (3%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R+ + LF + S+ GV DI E RE+ + + L L Sbjct: 85 SKEERQSFLKAKLFF-EKKINITKLSKSLGVSRTTVKSDILEFAREMEK-YDLQLENN-- 140 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++ G R +F R S + + D ++ Sbjct: 141 ---QLHGDEGKIRNLIFREFFREISELYYQDFSNDKKIPAENIFFEYLTEA--DIKAVKK 195 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 + SR L+ + ++ + Y+ L+ T N +++ +S E+++ + Sbjct: 196 FIREISRDLKNK-DNNFYEYFFSYMVISYLRIKQKKTIT-NVENKKFLQSIEEYKMISKD 253 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNV 251 + +E + +A + ++ +K L+ + N Sbjct: 254 IGPLEESLGVKYGKNEKMILADYMLGFHSYAYNTLIFDKWLEIELLVKELIKNVSSRTNT 313 Query: 252 RFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYG 311 + L + L H+ A+ R +I + + + + Y L+ +L G Sbjct: 314 DILSDDELLEGLLNHIKPAIYRMKNSIFTEEDIYFDEVKEYKELLEIVGESLKPLAELIG 373 Query: 312 VHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKH 371 S+ E L + F A + + K I+L+ + ++ + I Sbjct: 374 SGFSNSEKALFTLHFLASIERNTKKTVKNILLICSGGYGTSRLVADRMEKEYE-VKVIDV 432 Query: 372 MSVKAFLQTGAPRGAALIIAPY-TMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 +S T +II+ T P++ T + Q+ + Sbjct: 433 ISYFELFDTNI-ENVDIIISTIKTKERDFNGIPVVTVSPFFTMNDQKILSSY 483 >UniRef50_C7WZJ5 Predicted protein n=7 Tax=Enterococcus RepID=C7WZJ5_ENTFA Length = 650 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 59/422 (13%), Positives = 141/422 (33%), Gaps = 21/422 (4%) Query: 2 MPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 + + LS RR +I+ ++F T+ + +E V D+ EI+ Sbjct: 80 LESELSQDQLSPVNRRVKIIQSVFFEEDNPTLESLAEQYLVSKTSLYNDLK-IINEIIVS 138 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 + + + + + +G +L + + L KS + Sbjct: 139 NGIEIISN-NDGLTSQGAENEIQLAIKQLVTHFSNLIEE----------KSVNAKLYHFF 187 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQ-FNPLQRRWAE 180 + +++ R L + + L L + G + + Sbjct: 188 EKQLVDIVSKILHKNFRELTENVSDYYMESLLTTLLVQCRRIQMGYHVEGEDDYLFSSIR 247 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 F VA ++ + + + +++ RV + D + + R Sbjct: 248 YMETFVVANDMSERLSQETVLNFSEADKDYLSRQLFAHRV---TTEVKASDEKYVDLVYR 304 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L++ ++ + ++ L + L H+ + R I I+N L E Y L Sbjct: 305 LISRMSKIEKIDLTQDEHLFNSLLYHIPAMILRLKRGIHIENPLLENIRDQYSELFSIVW 364 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 AL E +Y V L+D+E + + F L +++ I+++ I ++R Sbjct: 365 YALVIVEQQYNVILNDDEISFILIHFQIALDRQSKAS--NIVIICQYGMSSAQFIYSKVR 422 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + N++ +++ F ++ + ++ +P P + ++ +I Sbjct: 423 KFIPAHDNVEISTLERFNKSDKENIDLI---ISSIDIPQSKTPFVKVTPLVSNQDYIKIM 479 Query: 421 KM 422 + Sbjct: 480 EA 481 >UniRef50_C4VFI2 HTH domain protein n=23 Tax=Enterococcus faecalis RepID=C4VFI2_ENTFA Length = 639 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 62/431 (14%), Positives = 142/431 (32%), Gaps = 20/431 (4%) Query: 1 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILR 60 ++ + +R ++ L T ++ V + D+ + R +L+ Sbjct: 81 IIDVDRFETYPDQKRRVNVLIFQLLSVKGYLTAQQLADELLVSRNTIVSDLEQVER-LLQ 139 Query: 61 YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGF------RLCPSFITSQFTPALKSEL 114 + LTL + + G N RL + ++ ++ ++ + Sbjct: 140 AYDLTLIRQARQGFTISGEESNVRLLMEFITQKELTEYDIYQIMNYVTKTKGAEKIPKIK 199 Query: 115 KRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPL 174 G + L+ + NL + Q +F+ +I + L + + T + Sbjct: 200 FGSGTLFQGCYRSALKKMRNLINPLDQNQFDYAEILSITLRVAIAAARMQMAHTIGTYRV 259 Query: 175 QRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQL 234 + +V + + R P+ DE ++ + Sbjct: 260 LSQKTRFEQRNEVPLLLLQEVFERYDLPLLADEYFYIYSDLFGTHQRQD----------M 309 Query: 235 RQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPR 294 Q K+++ + N F +++ L L+ HL+ + I N EE +P Sbjct: 310 VQLTKQVIESVSKELNYPFVNDRQLFTNLFAHLSLRFTKKHLFINEYNPFSEEIKGKHPA 369 Query: 295 LVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHE-KQIILLTGNDSEREA 353 L ++A + ++D +A+ F A ++ + +I+ + + Sbjct: 370 LFLAIQSACKQLIQRSVLLVNDSFCAYIALHFLAAQERQQQEAKVVRIVYVCSTGLGVTS 429 Query: 354 QIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTT 413 IEQ++ E SV + L+++ + P+ + P I LT Sbjct: 430 LIEQKILEEVPNVELAGFASVLNATEVIQAEKPDLVLSIF--PIEEMTYPFIKVSPLLTD 487 Query: 414 HQQEQIRKMLE 424 IR+ ++ Sbjct: 488 TDLSLIREEVD 498 >UniRef50_D1AQE8 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQE8_SEBTE Length = 687 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 63/419 (15%), Positives = 139/419 (33%), Gaps = 4/419 (0%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 L V S +R + L + SE V D+ +E+++ Sbjct: 75 ILNDIEVFSQEERLEILKFILCFDKTGLNLTKSSEKLRVSRTTIKKDMKILKKEMIQE-G 133 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 + + YR+EG L L+ L + + + K+ + N Sbjct: 134 FDVAYKNNEGYRLEGEPYKLELYKIGLLKEILILVNT--KDKESSYKKTMSELCDSLFNI 191 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCL 183 +++ + + L + + YL + H + + + Sbjct: 192 KGKESIKEFILNIHKNLSLNISDEIFYVIYAYLIILIDNHKNIQSLYTRSSNKSFLLGTK 251 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 EF V ++ + + +P + L +A + + + + IK++VN Sbjct: 252 EFLVIEKEIKKIKELKNAEIPKERILELADFILGITTNEYSSNNLENWIHEEVFIKKMVN 311 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F + + ++ L D L H+ + R I + N + +E ++ R Sbjct: 312 EFNKYIELDITSDEILIDCLIYHMKPVIYRIRNNIRVTNPVFKELIISKDPILEIVRIIT 371 Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363 E +G+ +EE L+A F A + + + K+I+L+ G +EQ ++E Sbjct: 372 RDIEKMFGIEFPEEELALLAFHFKASIDRNTHQNLKRILLVCGLGYGSSRLLEQSIKENY 431 Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 + + + LI+ + + P++ + L ++ K Sbjct: 432 NVDIVDVLPYYLLKDALKNYKNIDLILTTLDI-TEKYKIPVVKINPLLKQEDYLEMAKY 489 >UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A0_9FIRM Length = 654 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 62/401 (15%), Positives = 134/401 (33%), Gaps = 26/401 (6%) Query: 29 LTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLF 88 T+ SE+ + S + ET + L + L+ + ++G+ N+RL + Sbjct: 115 ERITVTRLSEMVYQSVPVCSRHL-ETCTQWLSLFNIQLSIKRNYGISLQGSEENKRLAIK 173 Query: 89 HWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRD 148 H + QF + EL L++ + + F Sbjct: 174 HLVINDPIHSVEQSIQQFAKGINLEL--------------LKSCIADIEKEWNFTFAEES 219 Query: 149 IHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEP 208 + LY + + + + E+ +AQ I R ++ +P E Sbjct: 220 YKSILLYAALAITR-SDFSVLHLSESEEEIVVKYNEYNLAQSIFRIINKKFYVNIPESEV 278 Query: 209 LFMALLFSMLRVPDP-----LRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQL 263 + A+ ++ + D++L+Q + ++++ ++ NV D+ L L Sbjct: 279 KYFAIQLLCSKMIHTQEIPAKEELTSYDKKLKQFVHKIISVISDIMNVDLMDDNELYYGL 338 Query: 264 YTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVA 323 H+ A+ R F L + Y + R + A A FE Y + ++ E + Sbjct: 339 LNHIRPAIFRMKFEKHSTKELTNFIQQEYKQTYRVSWALSALFEEYYDIKITSTELSYIT 398 Query: 324 VIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAP 383 + L + + +I L+T ++R I S + Sbjct: 399 LYIQTSLER--RMRPLKIALVTELGMGLNQMFCNKIRMSIPKIDEIAIFSYHEV-KIDVV 455 Query: 384 RGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLE 424 LI+ + ++ L+ E++++ +E Sbjct: 456 GKYDLIVTTSKLDFDQEK--VVQIKSLLSNTGVEELKQKIE 494 >UniRef50_A6LQ92 Transcriptional antiterminator, BglG n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQ92_CLOB8 Length = 641 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 63/416 (15%), Positives = 134/416 (32%), Gaps = 34/416 (8%) Query: 12 SAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYD 71 S +R IL L + V D+ + REIL + L + + Sbjct: 89 SPQRRMAFILYKLMNSEEPYLTDDLACEMNVGRTTVISDLKK-MREILNNYDLKIIGKTN 147 Query: 72 GSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQA 131 ++GT LN R + L I + D ++ Sbjct: 148 NGLALKGTELNIRFLVLENLYE------------------------MIYGEYELDEDVID 183 Query: 132 LVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEI 191 LV + + Q F++ L L + G T + EF + I Sbjct: 184 LVKEITDQYQ--FDTTTFESFIHSLVVTLDRLLNGHTINTLSEKYGELLRSWEFTLVNTI 241 Query: 192 GRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAH---QRDRQLRQSIKRLVNHFREL 248 ++R +P E +F+AL + P + + ++ + ++ + Sbjct: 242 SDAVEKRLTISIPIKERIFLALPIIGMNTPTNIEGISPHVEITEEVSNLVNHILERIKYD 301 Query: 249 GNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFES 308 + + L H+A +NR + + I N + +E + Y + A E Sbjct: 302 MGLNITLDDIL-KDFVYHMAFLVNRLKYGVHIHNPIVDEIRKKYKVAYKMAELARDVIEK 360 Query: 309 EYGVHLSDEESGLVAVIFGAWLMQENDLHEK--QIILLTGNDSEREAQIEQQLRELTLLP 366 V ++ +E G +A FG ++ ++ K ++ ++ G + QL+ + Sbjct: 361 SLDVKMTQDEVGFIAAYFGVFISEQQIEKSKIYKVAVICGTGRVTARLVASQLKGIFDAN 420 Query: 367 LNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKM 422 I S + L+++ + + + +++I+ + Sbjct: 421 TVIDLYSDSTV-TSEILDKYNLVLSTVQANFKTTATVIYLEKIFDEEALKKRIKSI 475 >UniRef50_B0N368 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N368_9FIRM Length = 619 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 54/399 (13%), Positives = 127/399 (31%), Gaps = 27/399 (6%) Query: 6 APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65 + + +R IL + + + S++ +D S + RE L L Sbjct: 85 SYFIPTNPLERAYYILGLMLESQEFIKIDDISDILFIDRTSVSRSLKYI-RERLNDFDLK 143 Query: 66 LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125 + ++EG RLC+ ++ + + I Sbjct: 144 IVQKTGKGLKIEGEEFRYRLCMAEYIYHKIGMLSTKIGED-------------------- 183 Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185 + R +++Q L + F+ + + EF Sbjct: 184 -HEFIDELRKVIFNDGITMPQRVFQNFIIHIQVQLNRIQRKCYISFHDNEIEKMKMEYEF 242 Query: 186 QVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQ----SIKRL 241 VA+++ + + + +E ++A+ + + QL++ ++++ Sbjct: 243 LVAKDVSKVINKYFHIELSVEEQCYLAIHILGKKSNSTSAIESCINDQLKEEIDIIVEKM 302 Query: 242 VNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRA 301 N +++ N+ F+++ L L H+ NR F N L Y + Sbjct: 303 FNQVKKVFNIDFHNDMYLRKALGIHINPMENRLKFNTYSRNPLIYVIKENYTLAYILSME 362 Query: 302 ALAGFESEYGVHLSDEESGLVAVIFGAWLM-QENDLHEKQIILLTGNDSEREAQIEQQLR 360 A + ++E G +A+ F L ++ ++ +K+++L+ + + + Sbjct: 363 AWLAIYNNADYINVEDEIGYIAIHFQYALERRKRNIAKKRVLLINEYNVAMSELLSFSIL 422 Query: 361 ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPL 399 + L I+ L II + L Sbjct: 423 KRYKDSLVIEKTISAGELSKYHLESYDYIITTVPLDESL 461 >UniRef50_D1AJW2 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AJW2_SEBTE Length = 688 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 58/423 (13%), Positives = 135/423 (31%), Gaps = 10/423 (2%) Query: 4 TLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQ 63 +L +L+ +R +IL LF + ++ V D EI + Sbjct: 75 SLNNSYILNQKER-TEILKLLFCFSRDINLTKAADYLKVSRTTIKSDFEILKNEI-KAVN 132 Query: 64 LTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNF 123 + + + + G+ + R + + + + EL ++ I Sbjct: 133 FNIKYRQNKGFYISGSRKHLRSFKLETFSKFISIYIKELYLSNFDKIIYELFQKNIPEK- 191 Query: 124 YDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAG---ITPQFNPLQRRWAE 180 + + ++L F + L + + ++ + + E Sbjct: 192 -SGQQINNFIRELEKKLSLNFSNNSYEILYSLILCFFVNDKNNSISKQSDYDSINNFFLE 250 Query: 181 SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR 240 S E+++ + + + + + + + + ++ Sbjct: 251 STKEYEIIKNTSKEFSGLIGIKFSKHRITEITDYILGISLCNFDISLVNNWINVEFLVQS 310 Query: 241 LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR 300 L+ +F + + ++ L + L H+ L R I ++NT E + + Sbjct: 311 LIANFNKYLEIDISGDKTLFNCLLYHIKPTLYRINKKIKLENTAFRELIINQDPTLEIVK 370 Query: 301 AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR 360 A+ E + ++EE L+A F A + + ++ K++IL+ G +EQ L+ Sbjct: 371 NAVNDMEKALNIEFTEEELALLAYHFKASIERNTYVYPKRVILVCGLGYGSSRLLEQNLK 430 Query: 361 ELTLLPLNIKHMSVKAFLQTGA-PRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQI 419 E I + + LI + + P+I L E+I Sbjct: 431 EHY-NLDIIDVLPYHQLEEALKNYNNIELIFTTINIK-NNYGIPVIKISPLLKKEDIEEI 488 Query: 420 RKM 422 K Sbjct: 489 EKY 491 >UniRef50_C0X124 PRD/PTS system IIA 2 domain protein n=3 Tax=Enterococcus faecalis RepID=C0X124_ENTFA Length = 634 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 55/428 (12%), Positives = 154/428 (35%), Gaps = 29/428 (6%) Query: 3 PTLAPPSVLSAPQRRCQILLTLF-QPGLTATMATFSELNGVDDDIASLDISETGREILRY 61 ++ + +R+ +I L L + ++ + + A D+ + +E L Sbjct: 65 DQISILQETPSKERKARIFLELLKHSSEGVNLYDLADCLYISESTAKNDLQQL-KEELAN 123 Query: 62 HQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIAR 121 Q T+ + GT +R + L + T +++ + Sbjct: 124 QQTTICFKGAN-IWLTGTERAKRQYMVSLLYAESD-----FQEKLTRSVREMI------- 170 Query: 122 NFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAES 181 + L+ ++ ++R ++ + L+ + + G T P Sbjct: 171 GYISLEELEEMIQQTFFNYERRLNQYVLNNIVLHYAISIERIRQGHTLLTKPKLAE--NH 228 Query: 182 CLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQR-----DRQLRQ 236 E+Q+A+EI + +E ++LLF ++ + + + ++ + Sbjct: 229 SEEYQMAKEIALRLEETYDILFSKEELAQLSLLFVGIQKEHTVNSEKTQLQQIVNPKIIE 288 Query: 237 SIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLV 296 ++ ++ ++ ++ +++ ++L HL +RS N+ + YP + Sbjct: 289 VLEEVLQKVEQIYFIQLKNKE-FFNKLAIHLQGLYDRSNVEAFTRNSRLWDLKTGYPLIY 347 Query: 297 RTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEK-QIILLTGNDSEREAQI 355 + + + + +++E +A+ G++L + + ++L+ + + Sbjct: 348 DISVYISSFIQERLNIWFTEDEISFIALHLGSFLESQRTEQQPFLLLLVVEDYHNMREVL 407 Query: 356 EQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQ 415 +++L+E +NIK + Q + L++ L I+ +TT + Sbjct: 408 QKKLQEHFGNQINIKVVRQTNIDQ----KKFDLLVTT-NRRLATKYEGAIFIHPFITTKE 462 Query: 416 QEQIRKML 423 +I + Sbjct: 463 LRKIENRM 470 >UniRef50_C2JT05 Transcriptional antiterminator n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JT05_LACRH Length = 696 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 66/423 (15%), Positives = 131/423 (30%), Gaps = 32/423 (7%) Query: 3 PTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYH 62 +R ILL L ++ + GV A D+ T + + H Sbjct: 82 DVFQFDHFHEEEERTYLILLYLLTTSDNVSLDHVVDYLGVSKSTAEKDVRRTRLFLEQKH 141 Query: 63 QLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARN 122 +L L Y ++G+ + QRL L + + S Sbjct: 142 KLLLKYTRANGYFIQGSEVKQRLILNDIILGLQQYSDSQ--------------DVIARTT 187 Query: 123 FYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESC 182 + + + L L + ++ +G + Sbjct: 188 CIGIEEIVHYAREVEEHIDVTYSDDAFITLVNTLAVNVTRNLSGR-VKDYDYFENKLSDT 246 Query: 183 LEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLV 242 LEF Q I + ++ L+F + Q L +I+++V Sbjct: 247 LEFASVQTITN--SEWVG---SESDLEWITLVFLSSNTLKGVFQDVQSSILL--AIEKMV 299 Query: 243 NHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARL---YPRLVRTT 299 + F + V+ + + QL HL A R + + + N ++ + + L T Sbjct: 300 DRFEQDTLVKIPNRKAFDKQLLAHLRPAYFRVKYGMHLTNIGVDKVFKEDTWHKMLFETV 359 Query: 300 RAALAGFESEYGVHLSDEESGLVAVIFGAWLM--QENDLHEKQIILLTGNDSEREAQIEQ 357 +A L E G EE L+ FG L +++D ++++ ++ N + + Sbjct: 360 KADLEPLEKLVGKSFPIEEIKLITFYFGGVLESRRQSDNNQQRAAVVCTNGIIAARLMFE 419 Query: 358 QLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQE 417 L L + +SV F + L+ + + +TT + Sbjct: 420 HLVRLFPEIAFLSAISVHDFETFD--KDYDLVFSTVPLNTNARQ---YIIHPLMTTEESI 474 Query: 418 QIR 420 +R Sbjct: 475 NLR 477 >UniRef50_C7XVA0 Transcriptional antiterminator n=2 Tax=Lactobacillus RepID=C7XVA0_9LACO Length = 496 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 50/424 (11%), Positives = 136/424 (32%), Gaps = 27/424 (6%) Query: 12 SAPQRRCQILLTLFQPGL-TATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGY 70 S +RR +++ TL + E V ++ D+ +L + L + Sbjct: 84 SPIERRNEVITTLLFNAPLAVNINDVYEKYYVSAELIRQDLLAINN-LLHKYNLNIQRHN 142 Query: 71 DGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQ 130 + V+G R + L + + I + YD++ L Sbjct: 143 NY-VAVKGEEQQIRRAINSALVQSKAMNTESIND---------FASEFEDLSNYDNSFLT 192 Query: 131 ALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQF-------NPLQRRWAESCL 183 ++ + L + +L + + G + + + E+ Sbjct: 193 TQIDWIQKSLGTTIPYPYNVNIFSHLYVLIKRFRNGKVVKDTQQSDFADKCLQLRKENAK 252 Query: 184 EFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243 ++++ ++ ++ + +P E ++ +R + + +N Sbjct: 253 FWKISNDVIQNTADYIHRDIPEIESYYLLEYLISMRYNHDFAIDDEVSSDASKLADYYIN 312 Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303 F+ ++ + L L +H+ NR I I N L ++ Y +L + Sbjct: 313 GFQ--LSIHDPKVKALKGDLISHIRPMFNRLKNRIVIANKLLDDIKSEYQKLFDCLKRLS 370 Query: 304 AGFES--EYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRE 361 +SD+E G + + F + + + K+++++ + + ++ Sbjct: 371 RQANDDGLLSWKISDDEIGFLTLYFAKYFEETSLN--KRVLVMCASGVGTSKLLYAKIHR 428 Query: 362 LTLLPLNIKHMSVKAFL-QTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR 420 + +S + LI++ + P + +I + + ++ Sbjct: 429 NFPELDLVGIVSKSDYESHYSQYVNVDLIVSTIPVS-PRNNEQVILSSAMFNMQDRNRLS 487 Query: 421 KMLE 424 + L+ Sbjct: 488 RYLD 491 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.163 0.436 Lambda K H 0.267 0.0498 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,314,876,573 Number of Sequences: 3077464 Number of extensions: 105193209 Number of successful extensions: 546048 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1628 Number of HSP's successfully gapped in prelim test: 5517 Number of HSP's that attempted gapping in prelim test: 524503 Number of HSP's gapped (non-prelim): 18719 length of query: 426 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 295 effective length of database: 637,248,572 effective search space: 187988328740 effective search space used: 187988328740 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 95 (40.9 bits)