 |
| Job Description | P54901 | | Confidence | 52.86% | Date | Thu Jan 5 12:06:05 GMT 2012 |
| Rank | 357 | Aligned Residues | 28 |
| % Identity | 11% | Template | c3clcC_ |
| PDB info |
PDB header:transcription regulator/dna | Chain: C: PDB Molecule:regulatory protein; |
PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator
|
| Resolution | 2.80 Å |
|
|   |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | T | L | F | Q | P | G | L | T | A | T | M | A | T | F | S | E | L | N | G | V | D | D | D | I | A | S | L |
| Query Conservation |   |
  |   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |
|
|   |
|
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |
|
|
|   |
|   |
|
|   |
| Template Sequence |   |
I | K | K | I | R | L | E | K | G | M | T | Q | E | D | L | A | Y | K | S | N | L | D | R | T | Y | I | S | G |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|