404 c1mraA_ Probab=98.40   E-value=9.9e-05  Score=49.59  Aligned_columns=123  Identities=21%

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHH
Q ss_conf             99999999999972998899845861157630378776267764878756156899999999986499937999857564
Q batch____       141 IDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD  220 (672)
Q Consensus       141 ~~~f~~aA~~a~~aGfDgveih~~hgyl~~~f~s~~~N~R~D~yGgs~enR~r~~~ei~~~ir~~~g~~~~i~~r~~~~~  220 (672)
                      .+...+-+..+.+.||..+-|+.++.-                        ..--.+.+++||+++|+++.+.+-.|.  
T Consensus       143 ~~~~~~~~~~~~~~G~~~~KiKvg~~~------------------------~~~d~~~i~~ir~~~g~~~~l~iDaN~--  196 (357)
T c1mraA_         143 VKLATERAVTAAELGFRAVKTKIGYPA------------------------LDQDLAVVRSIRQAVGDDFGIMVDYNQ--  196 (357)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEECCCSS------------------------HHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCC------------------------HHHHHHHHHHHHHHCCCCCEEEEECCC--
T ss_conf             899999999999669989998377899------------------------899999999999963999789997798--


Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
Q ss_conf             56889898999999999997599889940587533336577656455427899999976098799987898999999999
Q batch____       221 LVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDIL  300 (672)
Q Consensus       221 ~~~~g~~~~e~~~~~~~l~~~g~d~~~vs~g~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~pv~~~g~~~~~~~~~~~l  300 (672)
                          +++.++++++++.+++.++++++              .+.++..+..+ +.+++.+++||+..-.+.++++..+++
T Consensus       197 ----~~~~~~A~~~~~~l~~~~i~~iE--------------eP~~~~d~~~~-~~l~~~~~ipIa~dEs~~~~~~~~~~i  257 (357)
T c1mraA_         197 ----SLDVPAAIKRSQALQQEGVTWIE--------------EPTLQHDYEGH-QRIQSKLNVPVQMGENWLGPEEMFKAL  257 (357)
T ss_dssp             ----CSCHHHHHHHHHHHHHHTCSEEE--------------CCSCTTCHHHH-HHHHHTCSSCEEECTTCCSHHHHHHHH
T ss_pred             ----CCCHHHHHHHHHHHHHCCCEEEE--------------CCCCCCCHHHH-HHHHHHCCCEEEECCCCCCHHHHHHHH
T ss_conf             ----89889999999973117817995--------------59992228889-999997299099567658999999999


Q ss_pred             HCCCCCEE
Q ss_conf             78997699
Q batch____       301 SRGDADMV  308 (672)
Q Consensus       301 ~~g~~d~v  308 (672)
                      +.|.+|++
T Consensus       258 ~~~~~d~~  265 (357)
T c1mraA_         258 SIGACRLA  265 (357)
T ss_dssp             HTTCCSEE
T ss_pred             HCCCCCEE
T ss_conf             74999798