Reference sequence (query): batch____ Identities normalised by aligned length. Colored by: property
HSP processing: ranked Search cycle: 3
1 [ . . . . : . . . . 1 . . ] 127
batch____ bits E-value N 100.0% 1:127 MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN
1 UniRef50_B4EVI6 Phage antitermination Prote... 151 6e-36 1 48.0% 1:127 1:127 MRDMQEVLSRWGAWSANEGNSIDYSSIAAGFKGLIPSSRRSREQCSDDDGLKINKAVLHLKVNNSYLFQLVIMYYVKNYPLRSMASKLGISHNEVAKRLQTAEGFIEGCLSVDNVKLDMDKIIRKHS
2 UniRef50_B3WTB9 Antitermination protein Q n... 149 2e-35 1 43.7% 1:126 1:126 MRNIQQVLERWGGWAASEGGSVYFPPVAAGFKNLLPATQSGRLKCSDNDGLIINSAMSCLKKKDPYLCTLLEWHYVQAMPVRAMGEKLGVSHTHVLKRLQAAEGFIDGCLAMLDVVLEMDQSVQSK-
3 UniRef50_P68922 Antitermination protein Q n... 145 4e-34 1 77.8% 1:126 1:126 MRDIRQVLERWGAWAANNYEDVTWSPIAAGFKGLIPEKVKSRPQCCDDDAMVICGCIARLYRNNRDLHDLLVDYYVLGETFMALARKHGCSDTCIGKRLHKAEGIVEGMLMMLGVRLEMDRYVERE-
4 UniRef50_A4TNH3 Phage antitermination prote... 142 3e-33 1 41.6% 1:125 19:142 MRDIQLVLARWGVWAR-YSSGLDYSSIAAGFKGLLADTSKSKASCCDDDGLVVDGCVARLKQCRPNEYELIIRHYVLNQSKRAIARQQKRDEKLIRINMQMAEGFIDGCLAMLNVKLTMDPFIEN--
5 UniRef50_Q9T1U3 Probable antitermination pr... 142 4e-33 1 42.1% 2:127 3:129 -RDIQQVLERWGTWARDNNTGIDWSPIAAGFKGLLPLRPSMRPSCSDEDGRIIDNCVSQLQQVrpEELSLIIAYYVKGYSKRAIARRRRVDEGLIRAKLLIAEGFIDGCLSLLAVRLDMDPEVKMYS
6 UniRef50_Q7N2N8 Similar to the antiterminat... 140 1e-32 1 42.1% 1:126 1:126 MRNIQQVLECWGGWV-DDATGVNWPPIAAGFKGLIASTRSLRPSCCDNDGLIIDACIAKLQTVDkeEIEVLFMYYALRLSKRSIARLIKVPDIEVRSRLQKGESFVQGCLAMLDIKLEMDDEIQKH-
7 UniRef50_B6XBF3 Putative uncharacterized pr... 139 3e-32 1 38.6% 1:127 1:128 MRDIQLVLERWGGWAAEGKSKVGYSSTAAGFSGLFPESERVRLSCCDDDGIAIDAAIGKLISvrKDEFDLIDKHYIRDISKSAIAREMKCSEGKIRQKLMIAETFIDACLIMANVTLEMDEWCKKTS
8 UniRef50_D1NX77 Antitermination protein Q n... 136 2e-31 1 42.3% 1:123 12:134 MRDIQLVLEKWAGWA-SNNPGVDYSHIAAGFKGLISNKEAPRLSCTDNDGIIIDSVIAKLKAVRkeELELIVMHYLYGVSKRGIAKKLKVSEGRVRQMMQVAEGFVDGCLAMIGVVLEMDSEV----
9 UniRef50_Q7MZ44 Similarities with antitermi... 136 3e-31 1 36.9% 2:123 3:125 -RDIQKILLHWGGWVVHGRSGLGWSSVTAGFKGLVSRTSITKLSCCDEDGLIIDGCIAKLRNVqeQECDFIECHYAKGMSKRSIGRKYKLNESEVRKRMAIAESFILGCLTASDETLELDLLY----
10 UniRef50_B2VDR7 Antitermination protein Q, ... 134 7e-31 1 43.4% 1:122 1:122 MRDIKLLLRRWGGWAALGERRLGYAPVASGFRGLITHHASSRLQCSDDDGIIIDSCISRLAKVSKEQHDILVAHYLYQISLRSIARRRRCADGSIRRKIQTAEGFICGVLTALESELECENL-----
11 UniRef50_D2TCJ1 Antitermination protein Q n... 133 1e-30 1 41.3% 1:121 19:139 MRNIKLLLQRWGAWASSGERRLGYASVASGFRGLITHHGGNRLQCSDGDGIILDSCISRLAMESKEQHDILVAHYLYLISLRSIARRRRCADGTIRKKLQTAEGFVCGVLTALECELECEN------
12 UniRef50_B5XSK3 Antitermination protein Q n... 128 5e-29 1 42.1% 1:114 1:114 MRDMYEIMDRWGAWAASDNSGVDWQPIAAGFKDLLPHGKKTRQQCDDDEGIMIDGCVARLRMCKPEEYELIIAHFVIGMSLRAIAKKRRCSDGKIRGELRSAMGFVEGVLCIIH-------------
13 UniRef50_C4SH18 Phage antitermination prote... 121 5e-27 1 37.2% 1:121 1:120 MADIQTVLTRWGVWAR-DNAHLDYPHIASGFRG-ITSGGKQLESCSDNDGLAIDTTVGYLKRAAReeLDLIIRHYVYGQSKASIARLKKCNEREIRRQLQIAESFIDGCFTQSHITLEMHK------
14 UniRef50_B1JRS6 Putative uncharacterized pr... 118 5e-26 1 29.5% 2:123 3:125 -RNMQLVFERWGRWAASEesLVDWPAMSVAPQQLP--QASGKPSCTDEDGLTLDTCIAHMSTVFPQASLLIlqRYIGGHSLRQIADVMEIDINVVRRSLQASEAFLGGCLVMLGIRLEMDPEV----
15 UniRef50_C4T548 Phage antitermination prote... 115 3e-25 1 35.2% 1:122 1:121 MSNIQTVLARWGVWAREN-IHLDYPHIANGFKGMV-MRNKPAESCCDNDGLVIDKTIGNLQRASReeLELILRHYVYGQSKASIARLKKCNEREIRRQLQLAESFIEGGIVQSDAALEMHME-----
16 UniRef50_B7UQG2 Predicted antitermination p... 112 3e-24 1 35.5% 3:112 6:115 --DICEILDDWGAWVVAGNSSIDWQEIADKYKNVVPHGKKSRRQCSNDEGRIIDISILRLERYKQQEYELIVAHFVIGLSLRAIAKQQGCSDGTIRKRLQKALGFLTGYIAI---------------
17 UniRef50_D2U0V3 Phage transcriptional regul... 112 3e-24 1 32.5% 2:124 3:126 -RDIEKILLHWGGwaGNPYASVSWLPVASGFNRFMP-FSTSRLSCSDADGLVIDVCVSRLNTvmARELSYIEDYYIRGISKRAIARKFAVREDEVRKRMQIAEGFVLGCLETLDIQLDIDTLYK---
18 UniRef50_A9ZMR7 Antiterminator Q protein n=... 112 4e-24 1 28.3% 7:126 19:137 ------WLELWGAWVYSGRLEKRMSSVIAKFMESvpGRVMTRPMCNDDDGMLISQVVDSVMYIDKKAFGILLSYYAHGSSKHAIAS-YYHSVARPRKMLCRGGGRIQK-PSLATCRREVDEILNAS-
19 UniRef50_D1P374 Bacteriophage ST64T antiter... 108 8e-23 1 18.7% 4:126 21:143 ---LQNWLARFGAWVYSGRLEKRQSSMIAEFMATVERRSydRPTCSDDDGLLIHDVVDQIYHLDTIAFKMLLSRYVYCASDRAIASSYYENC-EPRIMPRRNGLLRKRKPSISTCRREVEVILKST-
20 UniRef50_C2LFC9 Phage antitermination prote... 106 2e-22 1 39.7% 1:126 1:124 MQKISKLMEAWGSWVVNNNLYIN--TLTINKRENVPIRVKLRKACTDRQGIIVSVCMSKLLKNHKKDYELLVDYYVFGQTFIQLAQAHRCSDTYIGKKLKKAEGIVEGMLIMAELIFIIEKNENST-
21 UniRef50_C7BH46 Phage antiterminator q prot... 106 3e-22 1 23.4% 4:127 28:150 ---IDSWLSLWGAWVYSGRIGKCQINMIYKFMVSvpSNNKTRQMCNDDDGMLISRVVDSVMFIDKKAYGILLSYYAHGASKLSIAS-YYHRVANPRKMMTRSGGRLKK-PSRGTCRREVDEILNAST
22 UniRef50_D0S8S0 Putative uncharacterized pr... 100 3e-20 1 26.9% 2:120 12:135 -RMMQNELAQWGKWARhnPSELTYTSPTYGLMRLKEGQKSSGIqlDDDALVAIDHLVTQLRFSRPDLYQWIEFHYLKGYPIAVLASKTKVDRRNIDKFLLAAETWLDSRLDFLLCQLKKD-------
23 UniRef50_Q4QKY2 Putative uncharacterized pr... 96 3e-19 1 17.4% 3:117 8:119 --DIKLTARRYGKWAREG-VGINYPAIQPFLRKSTPDHG--IPMLDDETAMRIHDATLIMRNVTPELYQVFMLRYVSNLSQGDVGREMRVSVPTIKSYLYAAHQSLKLLLTQNKCIF----------
24 UniRef50_B0QXB5 Putative uncharacterized pr... 93 2e-18 1 23.5% 3:117 4:119 --DVKRVLMLWGGYVRFTDC-KGYPTMQSFMRESPEMRTKRRyrLDDDTLEKVDIQIRYLEQHFPKQFDLLFFRYVCGYEPNQVWRKLSLSKGSYENELRLAERFVEGALVGSQISL----------
25 UniRef50_A6VNN9 Putative uncharacterized pr... 92 8e-18 1 20.0% 3:117 2:114 --NFKAKFIRFGYWGNS-RLETDYPVATVGIKGADRTKPYLDP-LSDDEGMLIDKGLLLMKQINFDQFHVFMLTYVKRYDRADICHFKNISLKHYYNLLHEAESFLIGYLLRGEVVF----------
26 UniRef50_D2TX54 Phage transcriptional regul... 90 2e-17 1 25.0% 2:113 3:110 -RHVKDLLEAWGNWSMsgTEYKGMSSIA------PVKFDDDRPWLSDEEGEIVDKAVAGLKRYDIDGYNIICLHYQHHISCRMIAKNWKKRPDYITAYMGRAESYIAGTVHTL--------------
27 UniRef50_B7GXQ5 Putative uncharacterized pr... 90 2e-17 1 23.6% 2:111 12:126 -RMMQNELAQWGKWARnnPSELIYKSPSLGLMRLKEGFKSKGIqlNDEALVAIDHLVMQLKLSRPDLYQWIEFHYLKGYPVAVLATHTKVDRRNIDKYLLAAETWLDSRLE----------------
28 UniRef50_A5UER2 Putative uncharacterized pr... 90 3e-17 1 16.7% 4:117 5:118 ---VERVLEKWGnwGR-DRIGTEYPSTTISIPVLPTVRKAHIRFLTDDECLKIEEQIMNLHEDSLLQYQILMALYVQQANERDICTALHISPACMYRERAKGVRFLKGAFTGAKIKF----------
29 UniRef50_B5WZY8 Putative antitermination pr... 89 3e-17 1 20.4% 2:114 3:116 -RDAEELLTQWGKWVWQETGVPRcsPMLAIMRDNVAMEQCLSASISDDDAMLIDGIIARMGRRDEEMANCVRVYYATEMTMQQVGKLLNLNRLKVRELLIAGRCYVEAVLDMRE-------------
30 UniRef50_B7V4N4 Putative uncharacterized pr... 89 5e-17 1 17.1% 4:114 6:120 ---LEFLMEQYGLWVWSDNgpRGSSPMLALMKRNPANEKrvAPCISDDRALQVDRFLARLYDEDPDAIRSLILYFIHGMSYRDIQDRMGISYADARMLVRAGLSALLACFVMEE-------------
31 UniRef50_B1J5L6 Putative uncharacterized pr... 88 8e-17 1 24.8% 3:111 13:123 --DTEYMLEQWGWWRMSEMGVPRysPLYALMRDNVPSEGGARqvITDDLALIIDGAVARLTKRNQQMGDFVWAYYGSKHPAMRVGREAGMSERKAREIIKAGVAWIDCALE----------------
32 UniRef50_Q88ML3 Antitermination protein Q, ... 83 2e-15 1 22.0% 1:118 1:111 MSNVEklLEHWGRWVVLGSGVSCCAS---------RENTILDPMITDDDALFIDRLVGRLSKRYPECGQVIIKYYTSrtSLRDVGKKLGFGEEKTRQLWKAGVAWIDG---AIDIRRE---------
33 UniRef50_C6AM41 Antitermination Q protein n... 83 3e-15 1 21.9% 11:124 24:137 ----------WGAWIRLGRLDKPEFNIIAKLMKSVIPADPSEPVCSDEVGMMISELIEqfFKNDRTLHYIVFSYYVNKNTINRIAVKLRENCGEMKMQPCAGKSDI-RIPSLKTVKRNVEKELK---
34 UniRef50_A7JW96 Hypothetical bacteriophage ... 83 3e-15 1 19.4% 4:127 19:144 ---IEELLRLWGAWEFGGLDLESRVNMIYRLMKSAEGVKssREVCNDSLGTLINEIFTVVTKRDVMLADILKQKYWFGRSERQIAIYYQLRDSEGRKERRWQEIIQDKCKKAERIIADILESKISSS
35 UniRef50_A5EUW5 Putative uncharacterized pr... 82 4e-15 1 19.4% 4:111 3:111 ---IEELLVAWGEWSRKDVLPARPRCFIAAFCRRSARDADDSVELDDEACEQINEGLMVLRGNHQRIHDVLISRYLYnyNDKAVAKRHGISESTVKDYRRRGHLFLEGWLC----------------
36 UniRef50_A7FBC6 Putative uncharacterized pr... 82 4e-15 1 24.6% 4:117 19:145 ---IENWLEQFGAWINEDNAETyrNTLTYLIDSVedARKRSLPQcsTDEARAVSGLLRDLRMNpqEWLDFVVLYYVHGLSEETIADISKCSRNAVRQDLKCGIAYIVGQRNTLRSKL----------
37 UniRef50_UPI0001BCFD6E hypothetical protein COK_08... 82 7e-15 1 23.5% 3:117 4:144 --DIKGVLNLWGSFVRFTDC-KGYPTMQAFMRESPQEREKQrpRLDDDTLAKVDRQIRKlkPNDKrqFAILYLRYVAGLENKPIWQKLSLSKGAFENELRLAERFVEGVLIGSEIRL----------
38 UniRef50_Q0I4J0 Putative uncharacterized pr... 82 8e-15 1 19.7% 1:117 5:132 LNDFKKKCRQWGYWA-TPRIGTEYPSISPSIP--VPQDKYCGKviNEDLAMEFERCVLIMQKVTRELYDVFMVTYVYRLPLRniCETLDISETTYKKYLYTAEISLKLMLSQNRCIF----------
39 UniRef50_UPI000045D91D hypothetical protein Aple02... 79 4e-14 1 21.1% 3:116 5:118 --DIDATLFRWGRHAKS-RIGTEFPccASWVADSQSKKHYHIDLTTDDDLIEMDGITKNLKQYDEQAYYVLLGNYVMRYDEKQLVKDLDISKTTLYRSLTIAKSFVFGAVIAKNLS-----------
40 UniRef50_B0VTT6 Putative uncharacterized pr... 78 7e-14 1 18.3% 6:125 19:144 -----QWLEQYGLWVRSTKSKVSANPLACLIDQNDTTRIRSscEIEDYEAVEVSKLLAAMHNDEREFLqlLILKYENDWSYRTIANTHGVGKDTVRKEIDKGLAYLDGKIEALA---EFDNEKKS--
41 UniRef50_A0L8A2 Putative uncharacterized pr... 78 1e-13 1 14.3% 6:110 17:123 -----ELLQEWARWSRSGMSSQNPITSTQLLMRRAAGhrSLKYENSEQQSLLVDCVISKMAKIFPHEVTLLQEFYLGKKGMRIIARERVFSYGKVQTLRSRAEGLFEGWF-----------------
42 UniRef50_Q021X5 RNA polymerase, sigma-24 su... 77 2e-13 1 16.8% 18:118 98:193 -----------------GAAKRGGSAIAVTLDETVVPSSGRGP-----DVLELDEALDRLAQRDERKAKVIELHYFGGMTREEIAGAMNLTVATVKRDLRLGEAWLRCHLSGGDSGRN---------
43 UniRef50_Q6ALN5 Putative uncharacterized pr... 77 2e-13 1 16.2% 1:111 1:113 MEFISEKLTNYALWLrsPVPHLGYGRLAISCCWQDYPAYELQpeISDEEAMLIDTAIARLRQRKASVAEALMVYYLSKENTSYVARELGMDRRKVTQLVSMGESWVAAWLE----------------
44 UniRef50_Q2SI66 Putative uncharacterized pr... 75 8e-13 1 17.6% 4:111 10:112 ---TRDWLVRYGRWVRAGGVLPRFERV-----ETCLDDYDGSELLTDDQALIVDKALALLSRVQPFEGKAIKWAYIDRREIRVIARDLGRSYGAARELLRMGECIMSGLLQ----------------
45 UniRef50_B3H0X4 Putative uncharacterized pr... 75 9e-13 1 19.2% 5:103 20:124 ----EEVFKMYGAWEFSGLDRDKRVNMIYKFMRSVedKLGMRPVCNDQLGMLINEILTVRTKHAKgmRDFFKQKYWFGRSERQIAMYMQKRDDEGKCLRRWQE------------------------
46 UniRef50_Q2SPC2 Putative uncharacterized pr... 74 2e-12 1 14.5% 1:110 5:112 MNETPWLLEQWAQWSKMD-ASLGYSSSTPFSR--LNGSATRSPVITDQEAAAVDLAVSKLRTRDEEMGEVVRLYYMAGENLSYVVRRmkLDRRKADLLVKSGVAWIDATL-----------------
47 UniRef50_D0S041 Putative uncharacterized pr... 72 4e-12 1 17.3% 4:107 19:148 ---FEEWCRQLGAWLNGDTETmmYMSDENLKDRLCTRRKGTCCQLNDNEARAIHRLILDLQSIdqEWIGAIWWHYVMGESIRDIAKSSDTYGSQIQQDIKCGLAFIK--------------------
48 UniRef50_Q0C0A3 ECF sigma factor family pro... 72 4e-12 1 21.1% 46:116 158:228 ---------------------------------------------SDERLLELDDALTRLSKLNPRLAEVVELRFFGGYTEVQAADILGVTDRTIRRDWIKARAWLFRELSGVAIE-----------
49 UniRef50_A3ZZC0 Extracytoplasmic sigma fact... 71 1e-11 1 19.5% 28:114 91:187 ---------------------------ARRRKSLKRGGDRDRYEILDDDAVilDAALSKLANEEPELAKLVELRYFAGLSVDQSAQVLGVSPRTVKRNWAFARAWLGRELHLEE-------------
50 UniRef50_A3I0X2 DNA-directed RNA polymerase... 70 2e-11 1 13.8% 46:110 113:177 ---------------------------------------------TPEEVLHLNEALTRLKAINHRHCRVVEFHFFGGYKHEEIAQMMGVSIDTVRRDWRLAKAWLSKEL-----------------
51 UniRef50_B1ZSA5 RNA polymerase, sigma-24 su... 70 3e-11 1 17.4% 29:114 105:190 ----------------------------AKVSASATGFDVAAPEADDEELLLINEALEALAAHDSRKAELVKQKYFAGLTLEEAAEVLGISVRTAKRDWAYARAWLFNEIQRLR-------------
52 UniRef50_C1A7M9 Sigma factor, ECF-like fami... 70 3e-11 1 10.1% 32:110 106:190 -------------------------------QRSVPLEAAETVSLDdeDVLAVHDALEQLERLDPRQARIVELRFFVGLSLEEIAELLDISPATVSRDWAMARAWLRVQL-----------------
53 UniRef50_Q01WD0 RNA polymerase, sigma-24 su... 69 4e-11 1 16.4% 51:111 127:187 --------------------------------------------------LELDQALDRLAKIDPRQCRVVELRYFAGLDEEEIALQLGISGRTVKRDWAMAKAWLYGELQ----------------
54 UniRef50_Q024W7 RNA polymerase, sigma-24 su... 69 4e-11 1 15.5% 28:111 57:150 ---------------------------AARLRGSRRQGGIPIKVNLDQSALllDEALTAFSKLAPRQAKVVELRYFGGLTDEEIVSALNISPRTARRDWQFAKAWLLRELS----------------
55 UniRef50_C1A6L8 Sigma factor, ECF-like fami... 69 5e-11 1 19.1% 5:114 72:202 ----EAWLKLSATPAAANTSPLHFKRIAARAMRQVLVEAARRRQAtsDDVIALHEALDRLALLSPRQAQLVESRYFGGLDVQAAAELLGISESTALRDWRLARAWLARELQASR-------------
56 UniRef50_Q01ZV6 RNA polymerase, sigma-24 su... 69 5e-11 1 14.5% 32:114 116:198 -------------------------------RRVPLDDARDGFTSDPDEFLLLHQALDRLSDYDFSLANVIELRYFAGLTLEETAEIVGISVPTASRRQRMAEAWLSREISVKT-------------
57 UniRef50_B0VKH6 Putative uncharacterized pr... 69 5e-11 1 16.3% 4:107 21:150 ---FEEWCRQLGAWLNGDtlIAMYMSDENLKDRLCTRRKGTCCQLNDNEARALHRLIIDIkhILQDWISAIWSHHVMGNSLRDIAQSNDTSVNQIRQDLKCGLAYIK--------------------
58 UniRef50_D0LUR6 RNA polymerase, sigma-24 su... 68 1e-10 1 14.7% 49:116 104:171 ------------------------------------------------DLLVLDEVLTRLEALDPRQARIVEMRVFGGLTVSEVARTLGVSTRTVEYDWRQARAWMRLELQRSDVS-----------
59 UniRef50_C1ABY3 Sigma factor, ECF-like fami... 67 1e-10 1 18.8% 47:110 116:179 ----------------------------------------------DGTLVALDDALDELARLAPRLAQVVECRYFGGLTELETAEALGVTERTVRRDWVKARGWLYGAL-----------------
60 UniRef50_UPI0001744968 hypothetical protein VspiD_... 67 2e-10 1 19.2% 13:111 69:191 ------------AWLRLATSQSEWDSQAHFfrRILVDRARTkrQLTDDPAllIHEALTRLEKEDAHAARIVMLKFFSGSTSEEIASMLGHSLRTVERQWTFAKARLYQMIQ----------------
61 UniRef50_A9ENA8 ECF-family RNA polymerase s... 66 3e-10 1 14.9% 48:114 118:184 -----------------------------------------------EDVLAVDAALKRLEGAHPRKAQVVVMRYFGGLSEEESAEALGVTARTVERDWRFARAFLHEALEQKD-------------
62 UniRef50_C1AC15 Sigma factor, ECF-like fami... 66 4e-10 1 17.4% 29:114 98:188 ----------------------------ALKRGGVRQRVSLDEQAVADDalEIDDALHHLATIDARLARVVELRFFGGLSEEEIAEALDVTVRTVRRDWVKARMLLRQSLGVAD-------------
63 UniRef50_D0T5A5 Putative uncharacterized pr... 66 4e-10 1 17.0% 4:109 19:148 ---TEDWFRQFGAWMNGNTEVKryKSliAKYmrEPVVRRGVTCQITDNEARAFQRIILDIRQIeqEWMGVIWEVYIENRRLREVATLFDTSTIQIRQDMKCALAFIEGR------------------
64 UniRef50_B9TKF6 Putative uncharacterized pr... 66 5e-10 1 16.4% 46:112 24:90 ---------------------------------------------TDEDILRVHEALEELAAVDQRLAQVVEMRYFGGLLETEIAEALGVTERTVQRDWQKARILLSMSLKT---------------
65 UniRef50_C4K4W3 Putative uncharacterized pr... 65 7e-10 1 25.7% 44:113 1:70 -------------------------------------------MLPDNEAQIVDRAVARLKHFDSLGYDIIVACYRGKVSCRAIGRALKRDHKSISGYLTRSEAYIAGQVDAL--------------
66 UniRef50_Q7UIV2 Similar to extracytoplasmic... 63 2e-09 1 15.7% 28:110 90:182 ---------------------------ARRRQSLKRGGDRKRFEIAEDDAIilNDALTKFERSEPEIAKLVELRYFAGLSVDESAEALGISPRTVKRNWAFARAWLGREL-----------------
67 UniRef50_Q7UJC0 Putative uncharacterized pr... 63 3e-09 1 14.1% 47:110 119:182 ----------------------------------------------DDDVVALDELLLQLASLSPRQARVVELRFFGGLGMKEIAAELNLGLRTVEKEWAMARAWMRREL-----------------
68 UniRef50_Q02A05 RNA polymerase, sigma-24 su... 62 4e-09 1 11.8% 49:116 127:194 ------------------------------------------------DLLELNRSLELLTSLDPQQGRVVELRYFGGLSVDETAEVLGISPATVKREWSTAKLWLLQHMEGSSIQ-----------
69 UniRef50_B7UQ12 Predicted protein n=61 Tax=... 61 8e-09 1 23.3% 4:106 24:167 ---IQGKLRMWGRWSYIgeSGIDKPELEAFLREMIAGRQKSWLscTDAEALRIDGVISKALARYPGLIDILRQRYEggMSKRKMAELLNEVHPeiDMWLRIAEFIL---------------------
70 UniRef50_UPI00016C3CD3 WD-40 repeat protein n=1 Ta... 61 1e-08 1 23.1% 20:110 97:189 -------------------AGKIRRSAARRQKRESANRERPAPSPADDTleRIDAELARL----PEVYRllLLCYVQGLSYADAARRLGCSPGALRGRLERGREQLRGRL-----------------
71 UniRef50_Q0C1Q3 ECF sigma factor family pro... 59 5e-08 1 18.6% 52:110 125:183 ---------------------------------------------------VLEKALIRLNVIDEEKAEIVELRYFGGMTLEEIAEIRGVSEATIKRNWRAARAWLLDCL-----------------
72 UniRef50_B5JNN4 RNA polymerase sigma factor... 59 5e-08 1 15.0% 47:106 154:213 ----------------------------------------------EEKVLLIDEALEQLKEKDPEQARVVVLKFFMSNTNAEVADMLRVSERTVERRWAYAKSWL---------------------
73 UniRef50_Q7N1K7 Similarities with bacteriop... 57 2e-07 1 13.2% 51:126 1:75 --------------------------------------------------MLIARVVDHIYHIDRVAFGMLLSRYVYCVSDRAIA-KHYHATVQPRIMIRRNGMLRKRKPSMSTCRREVEEILRAT-
74 UniRef50_A6WBB3 RNA polymerase, sigma-24 su... 56 2e-07 1 16.4% 54:114 140:200 -----------------------------------------------------DEAVTALRQLSPRQRAVLVLRYYEDWTEAQIADALNCSTGTVKTQASRGLSRLRQLLDTSR-------------
75 UniRef50_P44192 Uncharacterized protein HI1... 56 3e-07 1 22.7% 36:101 8:72 -----------------------------------AEKYRMRP-ISDELGMEIDGYLGVIRKVTPELYDVFVLTYIKRWEKQGIWRYLHISRREYFNRLKT--------------------------
76 UniRef50_C4SVI1 ATP-dependent Zn protease n... 55 7e-07 1 12.7% 45:123 68:131 --------------------------------------------CTDDEGLLMDSVVGLVLQSTPGLIGILQQHYIYKKKRYTMAEEMQEAHPE---------------LSISTCRRRIDAWI----
77 UniRef50_B6XKQ8 Putative uncharacterized pr... 53 2e-06 1 17.1% 45:114 97:164 --------------------------------------------CSDTEGGKMDKVISAVFAHDQGLLNVLKQHYIYKKSYYALALELHESKPSI--SLSTCRRRIKAWLSIAE-------------
78 UniRef50_A5TWC9 Putative uncharacterized pr... 50 2e-05 1 19.6% 52:97 82:127 ---------------------------------------------------LVDSGIGYLKDCHFKHYEIIELYYIKGMKLKQIASKLGINPATVSK------------------------------
79 UniRef50_Q0ATZ3 RNA polymerase, sigma-24 su... 48 8e-05 1 16.1% 48:109 129:196 -----------------------------------------------EDKLLLSSYIPALqkIKPEEWDIIIAYYAYNESDRSIAVRLKKPINTIKSKRQRAMARLQKK------------------
80 UniRef50_B8F4F6 Putative anti-termination p... 63 4e-09 1 14.0% 4:117 8:122 ---IDDILNVwrRWA-SHRGCRGYPSLQSFMPetVKITKYSIDELSEEHYLKLDEAVMTLHDLNLEAYQVLMAVFLQGQDKKNICLEMHISPRTYDNRLRTARDFMEGAVFGSGLIR----------
81 UniRef50_C1ZEB5 RNA polymerase, sigma subun... 63 4e-09 1 14.1% 48:111 150:213 -----------------------------------------------EDLLALDEALTKLADIKPQGAELVQLLYFGGLTLAEAAETLDISVRTASRLWAYSRAWLRRELA----------------
82 UniRef50_Q01QI6 RNA polymerase, sigma-24 su... 60 2e-08 1 16.7% 30:113 105:188 -----------------------------GKQQVPLDDRAASEQPHLDRILIVDEALNRLSEMDPRQGRLVELMYFGGLTAEEAAEATGVSVRTVKRDWSSARAWLQSQLRRS--------------
83 UniRef50_D0LMI5 RNA polymerase, sigma-24 su... 60 3e-08 1 18.2% 49:114 112:177 ------------------------------------------------DLLVLDDILSRLDELEPRQARIVELRVFAGMTVPEVARVLGVAVTTVEKAWRRARAWIRMELHGAD-------------
84 UniRef50_Q029S3 RNA polymerase, sigma-24 su... 60 3e-08 1 15.2% 47:112 126:191 ----------------------------------------------DVDLLGLNDALDRLAELDERQGRIVELRFFAGLSIEETAEVMNLSPASIKREWQTARAWLFREMTR---------------
85 UniRef50_Q15XA0 RNA polymerase, sigma-24 su... 58 8e-08 1 17.6% 29:113 106:190 ----------------------------AGVRRVTLVDYKYAEQPVSHDVVELDAALSALAKFDKRKAEILELQFFAGSTVSDIAQFYAVSPRTIERDGQFGKAWLHRELSIA--------------
86 UniRef50_Q2SCP5 DNA-directed RNA polymerase... 58 9e-08 1 17.4% 44:112 113:185 -------------------------------------------QICDddLLDLEDILQKLSNVDERKARIVEMSFFGGMTQEEIAEYLQVSLSTVERDLRFAKAWLVKELKI---------------
87 UniRef50_A6C669 DNA-directed RNA polymerase... 56 2e-07 1 14.5% 49:110 110:171 ------------------------------------------------DILELNEALETLAKELPRAARIVELKFFGGLTGEEIAEQLDVSLRTVNNDWKYAKAWLYRAL-----------------
88 UniRef50_Q2N5E1 Putative uncharacterized pr... 56 3e-07 1 20.6% 49:111 117:179 ------------------------------------------------DLARLNSALVRLEAIDAELMEIVEMRYFGGMTVPEVAEVTGWSEPTVKRRWQVARAWLADAMS----------------
89 UniRef50_Q01NG1 RNA polymerase, sigma-24 su... 56 4e-07 1 14.5% 49:110 124:185 ------------------------------------------------DLVELDQALQRLARLDARQGRVVELRFFLGLTEDEIADILDVSPVTVKRDWRIAKAALRIEL-----------------
90 UniRef50_Q01Y10 RNA polymerase, sigma-24 su... 56 5e-07 1 12.0% 62:111 137:186 -------------------------------------------------------------NVDPRKARVVELRYFGGLSVEETAEALRISPETAKRDWKMAKAWLLRELA----------------
91 UniRef50_B1ZRZ7 RNA polymerase, sigma-24 su... 56 5e-07 1 13.5% 33:106 108:181 --------------------------------RLDIDEVELADTTPEEKVLLINEAVEKLEAQDPERARVVVLKFFGGFTNHEVAASLGVTERTIERHWAFAKAWL---------------------
92 UniRef50_Q01VZ3 RNA polymerase, sigma-24 su... 55 1e-06 1 12.8% 65:111 140:186 ----------------------------------------------------------------PRKAKVVEMRFFGGLEEKEIARVLDISTDTVQRDWKAARAWLYGQLA----------------
93 UniRef50_D0LML4 RNA polymerase, sigma-24 su... 54 1e-06 1 19.3% 55:111 117:173 ------------------------------------------------------DLLARLAAHHPRQARVVELRVFGGMTVPEVADALEVSLSTAEKDWRQARTWMRGEFE----------------
94 UniRef50_D0LGY0 RNA polymerase, sigma-24 su... 53 3e-06 1 14.5% 48:109 106:167 -----------------------------------------------EEVASITRSLSRLQREYPEHAEIALLRYFAGCTVAEIAELLGIAVRTVERRWRFAAARLRTW------------------
95 UniRef50_Q0C234 ECF sigma factor family pro... 50 2e-05 1 14.5% 49:110 121:182 ------------------------------------------------QLMDVEAALVRLAQHAPELEQIVECRFFAGYTVNETARILGRPVRSVERDWSRAKTYLAAYL-----------------
96 UniRef50_D1BY52 RNA polymerase, sigma-24 su... 50 3e-05 1 20.6% 13:119 55:164 ------------AWVYagNEYRRRGRVTALVDKLGPMQDLAAAPVAVDDQLTVHAAMEALAEPDR---DLLRMAYWEDLSAPEIAQILGCTPTAVRIRLTRARGRLKKQLSIDDPEEEV--------
97 UniRef50_B4WLA9 Response regulator receiver... 48 6e-05 1 13.2% 64:101 149:186 ---------------------------------------------------------------DPKWLKVIELKYQEGLSDQAIARRLGVSDRTVRNYWTR--------------------------
98 UniRef50_C8WJ47 RNA polymerase, sigma-24 su... 48 6e-05 1 14.6% 33:114 75:166 --------------------------------RRTASRHRTQPLPDDEtaLMANEVWRVLDTLPPKYRAVVHLHYVEGYSTEEIAEIAKCRPSTVRSRLRRARAQLKTLIEQEE-------------
99 UniRef50_D1VHA9 RNA polymerase, sigma-24 su... 48 8e-05 1 15.2% 54:119 115:180 -----------------------------------------------------HDLLGALRQLPPRQRAVIVLRYFDDLTEAEIAAQLGCRPGSVKTHAARGMSRLRELLGASTVADRM--------
100 UniRef50_C7MS70 RNA polymerase sigma factor... 48 9e-05 1 21.6% 60:110 135:185 -----------------------------------------------------------LRELPPKQRAVIVLRYYEGLSEAEIAASLGISPGTVKSQASKALTSLRGKL-----------------
101 UniRef50_A8M0I6 RNA polymerase, sigma-24 su... 48 1e-04 1 9.2% 5:113 43:165 ----QETLIRVgawlRADGNPVGyrTMTNLfrRRRPVPIGTIPEIadTALAAVDSTATvlASLPPKQRAVIALRYVADLSDDEIGRLLDCAPATVRSQLSRGLSRLRATLTTE--------------
102 UniRef50_Q1D268 Putative RNA polymerase sig... 48 1e-04 1 14.5% 49:110 120:181 ------------------------------------------------EVLELDRALSELDTFQPRLARMLELRYFVGLDLLDTAAVLSVSPVTVKRDWAYVREWLLTRL-----------------
103 UniRef50_B0VNN5 Putative uncharacterized pr... 48 1e-04 1 15.9% 4:116 19:163 ---LEEWLYQFGAWMysGTCGKSINPIAVAMDqiPKGRGRITCEITDNEARAVQRLILDMQGQSeeWLDAVIDRYLYGNSWSDMVIKVgvDNPTILRTQHDAREDVRCGLAAMHCR-----------
104 UniRef50_Q01QY6 RNA polymerase, sigma-24 su... 47 2e-04 1 12.7% 48:110 125:187 -----------------------------------------------DELAIVEDLLGGLDEVDPQFRTVAELKVFEGLSMEEIAAQLDIPLRTAYRRWTFARTWLARHL-----------------
105 UniRef50_C7QKN1 RNA polymerase, sigma-24 su... 47 2e-04 1 11.9% 12:112 119:239 -----------GLWRRYGDDLTGmnNARSVLRRRKTARGYTPPHIPdeSVALLSevLEAMQKLPPRQREVLVLRYWSDLSEADIADALGISRGTVKSTASRGLEALGKILKG---------------
106 UniRef50_Q7URL7 Similar to RNA polymerase s... 47 2e-04 1 12.1% 53:110 138:195 ----------------------------------------------------LESALEGLEATSPRQREVVELRFFSGLTNEEVAKVLEISVATVERDWRLARAKLFDQL-----------------
107 UniRef50_B5G9W5 RNA polymerase ECF-subfamil... 47 2e-04 1 19.3% 58:114 128:184 ---------------------------------------------------------AAIAALNDRQFDVVVMRYFLGYPTARIARFTGLNPRTVDYHLRRAKEILSRQLGLST-------------
108 UniRef50_UPI000178967B RNA polymerase, sigma-24 su... 47 2e-04 1 19.1% 49:116 109:173 ------------------------------------------------EAIELNEAVTHLED---DLRRVIQLHYYRDIPINHIAKMIGIPEGTVKSRLHRARAILAERLESSTER-----------
109 UniRef50_B0C6N2 RNA polymerase sigma-24 sub... 46 2e-04 1 14.8% 60:113 135:188 -----------------------------------------------------------MAQIPPEQQQVIELAYFQGLSQSEIAKQTGLSLGTVKTRIRLGLSKLRGILDQS--------------
110 UniRef50_D1BWE5 RNA polymerase, sigma-24 su... 46 3e-04 1 16.4% 54:114 106:166 -----------------------------------------------------DRLVRALATLTPRQRRIVVLRHLVGLSEQEVAHDLGVSLGTIKSTASRGLAQLRQVLESAD-------------
111 UniRef50_B1YHB9 RNA polymerase, sigma-24 su... 46 3e-04 1 17.0% 15:114 80:171 --------------IRNCYRVLNQQTAVADLIEQIPVKESSREEHLD--------LIDALSHLRKEYRDVLVLFYFHDVPMKEIASFIGITLNTVKTYLRRGREELKKQLGGLD-------------
112 UniRef50_A7AH11 Putative uncharacterized pr... 46 3e-04 1 15.3% 3:113 65:184 --NIQSFLFKWlnHIKHQMIVDEYESciAFWGESTDSNDVLKSVINQDLREIIELSVNKL---PPKCAQAFRLAYFHDISHKEIAEIMGISPRTVEGHIRQALAFLRKDLKGL--------------
113 UniRef50_C8WRE2 RNA polymerase, sigma-24 su... 46 4e-04 1 21.2% 46:111 107:172 ---------------------------------------------SDDSTLLRADLARAMRAIRAEERDVLVLAYVQGLTLREIAERLQIPLGTVKTRLHRGLRGLRQQLA----------------
114 UniRef50_B8KCE9 DNA-directed RNA polymerase... 46 4e-04 1 13.6% 48:113 126:191 -----------------------------------------------EQLFILDRALDSFSVRYPRQSNALKLKYLMGLKNQEISQLLECSNSLIEKDLKFSRSWLQARMTLS--------------
115 UniRef50_C1ZAF4 RNA polymerase sigma factor... 46 4e-04 1 16.9% 36:112 99:180 -----------------------------------ANRQYDEESTPDPLGLliQSAIARLLPKDQE---LLTLKYTQGWSYFEIAKHLGLTESQVTTQLHRARVRLRQLLSA---------------
116 UniRef50_D0CCC1 Putative uncharacterized pr... 46 4e-04 1 17.5% 4:106 25:140 ---IEWHLEQYGSWLLLDDhsLGESSvaNGVVVDRRQRVAPLCKINDEHADAVADMLTHLMQNekQWMRIVIMFYVEFKSEETIAKKLGVSEFSVARDKMLGMVRL---------------------
117 UniRef50_C0C2S2 RNA polymerase sigma factor... 46 4e-04 1 14.0% 54:110 141:197 -----------------------------------------------------EELMEKILSLPPHESQVIIMKYYNEMKLEEIASAMDISRSTVKRYLAHGRASLEKIL-----------------
118 UniRef50_D0M4A3 DNA-directed RNA polymerase... 46 4e-04 1 16.7% 48:107 125:184 -----------------------------------------------EQLIIMDKALDNFSSRYPRQSSALKLKYLMGMKNQEISELLECSASLIEKDLKFSRSWLQ--------------------
119 UniRef50_A8LBJ3 RNA polymerase, sigma-24 su... 46 5e-04 1 12.3% 54:110 106:162 -----------------------------------------------------DQLFTALRQLPPRQRAVIVLRYFDDLSETQIATAVGCTPGSVKTHAARGLARLRTVL-----------------
120 UniRef50_A9AW11 RNA polymerase, sigma-24 su... 46 5e-04 1 25.4% 60:118 137:195 -----------------------------------------------------------LERLSPQHRAVLVLHYFHDYSLTEIAEILECPEGTIKSRLFYARKILKEQLYQAAIEGE---------
121 UniRef50_Q67QK7 RNA polymerase ECF-type sig... 46 5e-04 1 14.5% 3:119 82:197 --HLKAWLFRVARHRAIDCLRRRRSVVVEAFANQPAERAVH-PEAEAERAWLTEAILDALAELPPPYQSVIQMRFFHDMGYREIAECLHIPIGTVKSRLNYGLKGLARILRARRISLDV--------
122 UniRef50_Q9KCF6 RNA polymerase sigma factor... 46 5e-04 1 17.5% 47:109 109:168 ----------------------------------------------DEEARALHEMIQQLD----DKYKiiVLHYFHDQTYQEIAQVLGITEGAVKTRMLRAKQQLKAK------------------
123 UniRef50_C7PZ57 RNA polymerase, sigma-24 su... 45 5e-04 1 15.6% 54:117 106:169 -----------------------------------------------------DAVIRILSQLPPRMRAVLVLRYYDDLTEAQIAEALGISVGTVKSQAARALAKLREAMAAHEEER----------
124 UniRef50_A8L8N4 RNA polymerase, sigma-24 su... 45 6e-04 1 18.9% 48:121 97:169 -----------------------------------------------DLAMR-DQVLRALRELPKRQRAVVVLRYFDDLPEAAVAEILGCSVGSVKTHASRALARLRGSQHLGDVRVRIER------
125 UniRef50_Q38VH3 Putative uncharacterized pr... 45 6e-04 1 19.0% 38:95 107:165 -------------------------------------DQISDPHCDPDNAVIYNDLFEKLYQvdPRERRFLVLRYFANASLKEIAVDLNITRRTA--------------------------------
126 UniRef50_C5BZ96 RNA polymerase, sigma-24 su... 45 7e-04 1 20.8% 58:110 105:157 ---------------------------------------------------------GALSTLPRRERACVVLRYYSDLTVRQIAEQLGVSEGAVKRYLSQGVRRLEGVL-----------------
127 UniRef50_D2Q0B4 Transcriptional regulator, ... 45 7e-04 1 17.2% 54:111 97:154 -----------------------------------------------------DQLIGELAKLPRRQRAVLVLRYYGGQSDQEIADTLGCATSTVRAHASRALAALRIELT----------------
128 UniRef50_A9KJR1 RNA polymerase, sigma-24 su... 45 7e-04 1 18.8% 51:114 114:177 --------------------------------------------------MEIDEAIKRLNSLPQDQAIAIKMKYLEQKTLEEIARQLDIQPKTIKSRIHNGIVKIRQTLIGGE-------------
129 UniRef50_C6RMQ2 Putative uncharacterized pr... 45 8e-04 1 16.2% 3:119 17:180 --DLEGWLNQFGAwsNTGTCGKSINPIAVAMDEAVVKQRKFkcQIDDNEARAVQRLILDMqeIMDEWMDAIICRYFYGNSWSqvWTPLRDNEGQIVRymIkaRADVKCGLAALHCRYNF--------
130 UniRef50_A6W4G3 RNA polymerase, sigma-24 su... 45 8e-04 1 10.9% 54:108 98:152 -----------------------------------------------------SRVVEALRRLPPRQRAVIVLRYFEDWSEEQIADQLDVTRGTVKSQASKGLASLRA-------------------
131 UniRef50_B1ZQA9 RNA polymerase, sigma-24 su... 45 8e-04 1 16.2% 43:116 90:165 ------------------------------------------PALTPDLVDKIDgvIEALNEIDEHHRTPLVLFYLQSLSYREIAELLDVPIGTVMSRLSRGKALLRALVTARALQ-----------
132 UniRef50_C0D877 Putative uncharacterized pr... 45 8e-04 1 22.4% 48:114 126:189 -----------------------------------------------ETKRLVQEMIDRL---PEEQRMAVVLYYLENLSVGQIARLMECSEGTIKSRLNYGRKSIKAQVLALE-------------
133 UniRef50_B2A477 RNA polymerase, sigma-24 su... 45 8e-04 1 13.0% 9:116 70:186 --------EDFQSWIYS----IARNALIDYYRKKGRKKEEASEAISDDETVLIdeIFKLLEILSIEQQEVIQLRFVDELKIKEIAKVLDKSEGAIKGLLYRGLNKLSRHLDSKEVQ-----------
134 UniRef50_Q67T27 RNA polymerase sigma factor... 45 9e-04 1 17.5% 55:111 133:186 ------------------------------------------------------DAIDRLS---PDYKEVVLLYHFYHLSYQQIADRLGVPVRTVETRLYRARANLKRMLV----------------
135 UniRef50_B5RWL8 Extracytoplasmic function s... 45 0.001 1 10.8% 12:104 93:173 -----------GTWVESTADLPEYADETPGHDRQV------------DAGRELDRLSAAIAQLPPRCQEVFVLHKIHDMPQAEVAVRLGISRKAVEKHIRRGMS-----------------------
136 UniRef50_Q1ZEJ7 Putative RNA polymerase ECF... 45 0.001 1 12.5% 48:111 131:194 -----------------------------------------------DESIDLVNALDLLRENHPRQSEVFELKNFAMISHQQIADMLSISTRTADNDLKFAVTWLRVKLV----------------
137 UniRef50_A6LZG2 RNA polymerase, sigma-24 su... 45 0.001 1 25.9% 58:111 122:175 ---------------------------------------------------------AEIEKLDLKQKTVIVLYYFNGLTVSEIAKVMGCFEGTVKSRLHSARKKLKSSLI----------------
138 UniRef50_A0LT00 RNA polymerase, sigma-24 su... 44 0.001 1 17.2% 55:112 111:168 ------------------------------------------------------EVLAALRALPRRQRETLILRYYADLSEQEIARTLGISRGAVKSHTFRGLAALRGRLAA---------------
139 UniRef50_UPI0001C370C3 DNA-directed RNA polymerase... 44 0.001 1 15.0% 54:113 99:158 -----------------------------------------------------NEIRENISKLPPKYSSVIFLYYYEGYSIREIAEMLGKNENTINSNLQRGRKKLKIELERE--------------
140 UniRef50_A4E6Q4 RNA polymerase sigma factor... 44 0.001 1 20.4% 48:101 195:245 -----------------------------------------------DDRLVIEEAI---RDFSPREREVIELRFVKGMTQIEIAKKLGISQVQVSRLLRR--------------------------
141 UniRef50_D1AC80 RNA polymerase, sigma-24 su... 44 0.001 1 16.7% 4:117 36:168 ---LQGALEryGRWGrkRRGDPEwrSIINAVRDGWRGRRRheEQPADSAYLPIDDLLTrlAALPPRQRMVIALRYWGGYTEVETARLMGTSVGTVKSQAHRAMRELRARLARTESAR----------
142 UniRef50_D1VK63 RNA polymerase, sigma-24 su... 44 0.001 1 16.7% 54:107 116:169 -----------------------------------------------------DGLVRALRTLPPRQRAVLVLRYFDDLPEADVAAALGCSVGSVRSQASRGLARLR--------------------
143 UniRef50_C0ZBE3 RNA polymerase ECF-type sig... 44 0.001 1 21.7% 19:110 88:177 ------------------DEQKRRKRIILSAMEDDIESRASIPM--DdeRIQIEEALARLRPNYRH---IIILKYFEDRTIRDIAEVLGHPEGTIKTWLHKALGALRKDL-----------------
144 UniRef50_UPI0001BC2FB9 DNA-directed RNA polymerase... 44 0.001 1 17.5% 54:116 95:158 -----------------------------------------------------NGYLTELVQDMPEKYrvIHLFYYEGYSIKEIALMLGEKENTIASQLSRGRERLKGMLSEKEVR-----------
145 UniRef50_A6GD49 RNA polymerase sigma-70 fac... 44 0.001 1 26.4% 5:114 84:187 ----RNVLRQW-AWErtREEGLGEVSVADLGVGVSTAFRQAREQ---------KLLVAGLQRLPIDAQVILELYYWEGLRAREIAGVFAIPEGTVRGRIRKAKVLLEAELDALT-------------
146 UniRef50_Q05SP3 Putative type III sigma fac... 44 0.001 1 19.3% 18:100 143:223 -----------------PRSRDRYPSDADGDIPLIQELSDMTVSCDDDQQRE--WLQEQLEQLPQRARSCIERHYLAGTSAKDIAKEDGCSCSEIRRILR---------------------------
147 UniRef50_C6M4E4 Putative uncharacterized pr... 44 0.001 1 18.4% 4:117 3:121 ---IDDLLARWGFwvRDDNGLGYATSAANRAMAGDANTGGTRPLLpdADSvaVDRVVMGLPRFHQE---VLKVQYSGGFATRSavKECGCSGASFYRYLSDAEAMLAVRLRDGEVGR----------
148 UniRef50_B6FXK5 Putative uncharacterized pr... 44 0.001 1 17.6% 13:114 93:194 ------------AWKLSKSDKKNVPIDEIFAKAEREQNHESdkCLESETVEIVRSAVNNL---DEKYRAVVVLYYFNGFSVKEIANMLDVFEGTVKSRLFKARRLLKGKIESLN-------------
149 UniRef50_Q2IJT3 Sigma-24 (FecI-like) n=3 Ta... 44 0.002 1 24.6% 54:114 156:216 -----------------------------------------------------DGLAAALGALPPEWREALWLREVEELSYQEIARVQGCPVGTVRSRLARARRELAGRLRAED-------------
150 UniRef50_B9XAA5 RNA polymerase, sigma-24 su... 44 0.002 1 15.4% 12:115 69:175 -----------AGWLYNTTRNLAMHTVRSEQRRRLREETAVTMQasDSDAGHIKEHLeaMSELEPDDRDTLVLRYFEDRSLREVGQEFGISEDAARMRVNRALEKLRTIFNRKGI------------
151 UniRef50_A1SDN5 Sigma-70, region 4 type 2 n... 44 0.002 1 17.3% 56:107 106:157 -------------------------------------------------------LVEALATLSPRQRTALALRYVEDLDVRGIAQRMGCSEGTVKSQLSRGTERLR--------------------
152 UniRef50_B1I489 RNA polymerase sigma factor... 44 0.002 1 23.8% 48:110 114:173 -----------------------------------------------EEHAVISAAIDGLAAEYQ---DVILLKYQFEMTTKRIAETLNIPEGTVKTRLRKARAILESVL-----------------
153 UniRef50_A9B5K1 RNA polymerase sigma factor... 44 0.002 1 15.4% 49:113 132:193 ------------------------------------------------EATQLWQAISRLAQREQE---VIYLRYFLELSEQETAQALGIAQGTVKSRLHRALVRLRGVIDGE--------------
154 UniRef50_Q2JWP6 RNA polymerase sigma factor... 44 0.002 1 13.8% 33:112 220:296 --------------------------------DTIPDQRYRSFQLAEEDRIRLQNALAKLEERTR---QILEFVFFYDLTQKETAERLGISAVTVSRQVKKGLERLAKLLSQ---------------
155 UniRef50_C0A8Z5 RNA polymerase, sigma-24 su... 43 0.002 1 16.1% 11:103 130:226 ----------WYWWRRKRDKTVSFDQPVSSDNETPLSEIYAAPVESPDDITvvDRVASGMEKLNAKHREILILRNVKNLSYEEIGTILGISVGTVKSRIARAR------------------------
156 UniRef50_D1BJJ1 RNA polymerase sigma factor... 43 0.002 1 18.8% 28:112 71:152 ---------------------------SAELRRTLADDLRIVRPRADDACLDVRDALLRLPPLHRE---VLVMTYWGRLTDHEIAGALEITPAAVRSRLTRARALLRSTLLA---------------
157 UniRef50_A4X1T5 RNA polymerase, sigma-24 su... 43 0.002 1 15.6% 34:110 225:305 ---------------------------------LDAEREDRGPEGSPEAAVVEhtLLGAVKQLNPEQQECIVLRFLQGFSVAETARAMGKNEGAIKALQYRAVRALARLL-----------------
158 UniRef50_A4F607 RNA polymerase ECF sigma fa... 43 0.002 1 13.3% 13:110 100:184 ------------RWRR-----TRRETLIAEFPDVPAQPRHDRLE---------DEPvqALQTLPPRQRAVVVLRFYEGLSEAEIADTLGVSCGTVKSQNSKAMATLRKRL-----------------
159 UniRef50_A0LWL9 RNA polymerase, sigma-24 su... 43 0.002 1 15.3% 55:113 144:202 ------------------------------------------------------EVMTALRRLPERQRQALVLRYWMDLREHEIAEAMGITTGAVKAHISRGMAALTRYLTAS--------------
160 UniRef50_A6GRF7 Sigma factor, ECF subfamily... 43 0.003 1 11.5% 53:104 103:154 ----------------------------------------------------LDKLLAIINDLPPRCREAFILFKFDGLSYQEIAQRMDISPRTVEMQLRIAMA-----------------------
161 UniRef50_A9U7C4 Predicted protein n=1 Tax=P... 43 0.003 1 17.5% 54:110 92:148 -----------------------------------------------------ESIIQYLRELKPEYRVLVEYRWRKGLSYREIADLLEVTEDAVKQRLYRARESIKKML-----------------
162 UniRef50_UPI0001C37E82 ECF subfamily RNA polymeras... 43 0.003 1 20.0% 53:112 130:189 ----------------------------------------------------ISELYNAIESLNPMQKERIVLYYIKGLTQQQIAELQRVRLFTVQKSIKAAEKNLKKILEM---------------
163 UniRef50_A3ZNA7 Probable RNA polymerase sig... 43 0.003 1 17.5% 55:111 146:202 ------------------------------------------------------ELIQAVSQLQSDQRRLIEMRHRHGMTYEAIGQELGISERTVRNRWANAITQLRKELC----------------
164 UniRef50_C8WK82 RNA polymerase, sigma-24 su... 43 0.003 1 17.0% 9:114 46:169 --------EAFLRFVRSGRSPRDGKPLAYLfrNLCIDAARARrsPDADPAMAidALVDAL---PPELRDVVELRFDQGFKVGEIADVLGVSRFAVNRRLNRALAELRRGLEGKD-------------
165 UniRef50_C7PWP3 RNA polymerase, sigma-24 su... 43 0.003 1 24.6% 56:120 101:173 -------------------------------------------------------IIAALRKIPEAERRAIVLHHIVGLTVEDVAAETGVAQGTVKARLHRGRHRLSGHLTIDdiRKEMH-------
166 UniRef50_A7B3V6 Putative uncharacterized pr... 43 0.003 1 20.7% 21:107 119:209 --------------------SVAFSSITYSNSDEILDFEDDrpEIadeTARLIDNILNSLS---EEQRVPIALYYYEQMSIKEIAHLLNCSENTVKSRLAYGRKKIE--------------------
167 UniRef50_D2AQV8 RNA polymerase, sigma-24 su... 43 0.003 1 16.9% 48:124 92:170 -----------------------------------------------DDA-TIDRIILrlARLTPRQRAVIVLRFYEDLSERETAEILGCSLGTVKSQTHHALGRLrlAPELSQLFAEIEEVRR---
168 UniRef50_B4CU29 RNA polymerase, sigma-24 su... 43 0.003 1 20.6% 48:110 134:193 -----------------------------------------------EDAALLDTA---LRELPPEQREVVVLRVWGGLTFAEIATALEQSINTITSRYRYALEALRREL-----------------
169 UniRef50_D1QQH9 RNA polymerase ECF-type sig... 43 0.003 1 14.3% 34:117 95:175 ---------------------------------NPAHNTTAKYVENMELGRQIEEAIEELPDKRR---QIFIMGYVHGISNKEIAEMMNISVRTVEVQIYKALKYLRVRLGYLTSFL----------
170 UniRef50_D1PI45 RNA polymerase ECF-type sig... 43 0.003 1 18.4% 28:114 65:157 ---------------------------INACKDLLRSVFRRRTVPLDEAAELshRAVLQAVQGLPAAydVVYLHYYEGYTAPEIAQILGKNVNTVYTRLTRARGLLRQALGGDD-------------
171 UniRef50_Q0FRC0 RNA polymerase sigma-70 fac... 43 0.003 1 19.7% 46:111 99:166 ---------------------------------------------SDTETAVMHklAAALQQLTPELRAVVELTYYNGYLYTEIAEILECPVGTVKTRMMTARKRLREMLS----------------
172 UniRef50_C8W9U8 RNA polymerase sigma factor... 43 0.003 1 14.3% 48:117 218:284 -----------------------------------------------DDRIVLDEAI---RDFSPREQEIIRMRFVEGLTQVEIAEKLNISQVQVSRLLRRTLKRIQEKIDPESVNR----------
173 UniRef50_Q7NJR8 Glr1764 protein n=1 Tax=Glo... 43 0.003 1 14.8% 58:111 140:193 ---------------------------------------------------------DALEKLSPNHRRVLEMSYFKELSQREIAEKLGTPLGTVKSWVRRGLSELKETLQ----------------
174 UniRef50_Q67KB3 RNA polymerase ECF-type sig... 43 0.003 1 18.9% 9:103 50:145 --------QAFGAWMRRILIRQCRQILERRRRSFPVDDLAAHLPDtdPEATAIWEMVARLGDH---LRPVVVLRYMLDMSQQEIAEALGIPLGTVKSRLGKAL------------------------
175 UniRef50_B1ZUG0 RNA polymerase, sigma-24 su... 43 0.003 1 12.1% 15:113 430:515 --------------AGDDQPEIEFASPDTFFAGMDAGERREW----------VDAALDKL----PEHQRvlVLYHFEDMSYEDIAKRLRISLAKVKTDILRARAALARILERS--------------
176 UniRef50_B0N2H4 RNA polymerase sigma factor... 43 0.003 1 20.3% 25:103 167:250 ------------------------SSLQEEVKNDDGNNLKMIDSITDDKTVviD-LYDALKSLNQKEHRVIKQRYFEGLSQSEIAKELFISQAQVSRIERKAL------------------------
177 UniRef50_Q7WZ92 Putative uncharacterized pr... 43 0.003 1 16.1% 58:119 108:169 ---------------------------------------------------------AALGRLTPRQRTILVLRYFEDLSETEIARVLGIRVGSVRSQIHRSLERLKQTAPELTIMREF--------
178 UniRef50_A7NKI5 RNA polymerase, sigma-24 su... 43 0.003 1 27.8% 58:111 129:182 ---------------------------------------------------------AALLALSPIQRALIVQRYYLGLSEAEMANSMDCPPGTIKSRLHAARERLRGILA----------------
179 UniRef50_A3TPZ9 Putative RNA polymerase ECF... 43 0.004 1 12.1% 43:108 93:160 ------------------------------------------PSTDddDVVDRDALLEALSGLPPRQRTAVTLRYFEDLPDVEIAALMGCSVSTVRSSIHHALAALRA-------------------
180 UniRef50_B9XHV4 RNA polymerase, sigma-24 su... 43 0.004 1 14.9% 31:117 95:183 ------------------------------FREQEAYMQSTVQECAdqLAPLLDEAMGRLGKKDREA---VVLRFFKEKSLNEVAEAMKVTEAAAQSRVHRAMEKLRKHFMKRGVTL----------
181 UniRef50_B7B6L4 Putative uncharacterized pr... 43 0.004 1 14.0% 28:113 208:290 ---------------------------IAFLGEASDSNDVLKSVINQDLREIIELSVNKL---PPKCAQAFRLAYFHDISHKEIAEIMGISPRTVEGHIRQALAFLREDLKGL--------------
182 UniRef50_C5C2T2 RNA polymerase, sigma-24 su... 43 0.004 1 18.8% 64:111 138:185 ---------------------------------------------------------------TPRQRRAVVLRYFLGLPEADVARDLRVSVGTVKSTTSRALAVLRGHLE----------------
183 UniRef50_C6J878 RNA polymerase sigma factor... 43 0.004 1 20.0% 65:119 106:161 ----------------------------------------------------------------PEDLRILvlYYLEGFSQKEISEALDIPEGTIKSRLSRAREFLKAQLSDEEEKRPM--------
184 UniRef50_UPI0001695612 hypothetical protein Plarl_... 43 0.004 1 22.6% 52:104 146:198 ---------------------------------------------------KIDRVLEVMEQQEPHLADLLRLRYIEGCGISEAAKKMNISRSTLYRWVPEAIG-----------------------
185 UniRef50_Q67T39 RNA polymerase sigma factor... 43 0.004 1 15.6% 44:107 119:179 -------------------------------------------VLDSEERRLLHVAIGRL---DPVHRTVIVLKYFHEFSDTEIAAVIGCPPGTVKSRLHRARELLR--------------------
186 UniRef50_Q67MR5 RNA polymerase sigma factor... 43 0.004 1 23.6% 60:114 117:171 -----------------------------------------------------------LQRLTRAHREVLLLRYFHGFTEPEIAEILGLPVGTVKSRLHAARQAVRRHLNATD-------------
187 UniRef50_A6X3H9 Transcriptional regulator, ... 43 0.004 1 17.1% 63:103 19:59 --------------------------------------------------------------IARQMHQALVLHFLEGLTQAQIADQLGISHATVNRLIKRGR------------------------
188 UniRef50_A6GEF8 Sigma-24 (FecI-like) protei... 43 0.004 1 17.9% 9:114 51:170 --------RRFGSW--EGRASARarRVAFRYRRSQARRErpRPEPPEFDAQLSDrvVSALDALSPERRQVYVLSVVEGLRANEIADALDCKVPTVYSRLRRARADLERVLSLAH-------------
189 UniRef50_A6WAA6 RNA polymerase, sigma-24 su... 42 0.005 1 12.9% 50:111 132:193 -------------------------------------------------AERVDHLLAAVQRLPRRQRHALILRYWMDLPVAEIAEALQIPLGTAKSDISRAQRALATRLE----------------
190 UniRef50_A3ZWU1 RNA polymerase ECF-type sig... 42 0.005 1 16.9% 33:115 88:167 --------------------------------GSPAERDPLGWLLADERQQQVRDALAELPQRD---AEILLLKYLEDWSYQQIADRIGASHSAVEARLHRARGRLRDKLRARNV------------
191 UniRef50_D1SDA4 RNA polymerase sigma factor... 42 0.005 1 14.5% 56:110 101:155 -------------------------------------------------------LVAALRQLPPRHRQALALHYLFDLPVEEIAREAGVPTGTVKSWLSRGRARLAELL-----------------
192 UniRef50_B9CP17 RNA polymerase sigma factor... 42 0.005 1 13.7% 45:117 200:276 --------------------------------------------ITEDEALadDRIvdAIADFSPREQEIIRMRFVEGLTQVEIAEKLGISQVQVSRLLRRTLKRIQEKIDPESVTR----------
193 UniRef50_Q67LD3 RNA polymerase ECF-type sig... 42 0.005 1 12.9% 47:116 110:182 ----------------------------------------------EEAALALDdaVSrlQALSPDQQDVVLMRFAGDMKLKDIAAAMGKTEGAVKALLFRALNTLRRKLSESGVQ-----------
194 UniRef50_D2LZ92 RNA polymerase, sigma-24 su... 42 0.005 1 24.2% 42:103 96:157 -----------------------------------------GEQSSDDVGYEKIEIMELLETLPEEQCQLLKLFYIEGFSIEDLASIYKVPENTIKTRLRRAR------------------------
195 UniRef50_C8XC28 Transcriptional regulator, ... 42 0.005 1 17.6% 56:106 143:193 -------------------------------------------------------VVNALGDLAPRQREVLVLRYYGGLSEAEIAEATGLSKGTVKSTASRAVAKL---------------------
196 UniRef50_D1A9V2 RNA polymerase, sigma-24 su... 42 0.005 1 15.0% 54:113 142:201 -----------------------------------------------------SAVIDALARLPARQREALVLRYYADLSEAEIARAMGISRGAVKSHTARGMAALRNVLEQL--------------
197 UniRef50_A6LEC9 RNA polymerase ECF-type sig... 42 0.005 1 15.8% 56:112 168:224 -------------------------------------------------------LMKALTKLSPHQREIIYLYYVNGLGHDEIAEILGINYQSSKNLLSRTLSKLRRWFSL---------------
198 UniRef50_B8G5V6 RNA polymerase, sigma-24 su... 42 0.005 1 18.3% 51:110 133:189 --------------------------------------------------RLISNALADL---PPDQREVIELAYFGGLSQREIAEHLQSPLGTIKTRIRLGLQKLKQAL-----------------
199 UniRef50_D0LAC0 RNA polymerase sigma factor... 42 0.005 1 13.9% 15:115 128:225 --------------VRSESASSRRDIRYAAQAQESPFDLVSDAVGSSETAETVVGCLGSLTDV---QRQSVVLAYYEGLTYREVAERLSVALPTVKSRIRDGMIRLRRCLGGADV------------
200 UniRef50_C6VZP7 RNA polymerase, sigma-24 su... 42 0.005 1 12.3% 44:108 110:174 -------------------------------------------SIHDEEKELTQKLAAVLQNLPKRQLEAITLRYYENFSISEIAEIMDVSDKTVRNTLHNSLTLLRK-------------------
201 UniRef50_A8L2N7 RNA polymerase, sigma 28 su... 42 0.005 1 17.6% 60:110 322:372 -----------------------------------------------------------LEKLPPREKRILLLRFFGNMTQSQIANELGISQMHVSRLLARTLAQLRRGL-----------------
202 UniRef50_A3TQ93 Putative RNA polymerase ECF... 42 0.005 1 16.4% 56:110 93:147 -------------------------------------------------------VVAALRQLSPVLRETVALHYLADRSLEQIAQELEVPIGTVKARLHRGRAQLADLL-----------------
203 UniRef50_A6P2Y8 Putative uncharacterized pr... 42 0.005 1 18.9% 5:110 47:162 ----EALLRAWQAFSrsEEALKGWLLKITVNCAREQRRKGGRVTYTDdeDGQYDGLWDAVLALPEDQRTAVVLFYYEDMTLAQIASVLGVAQGTVKSRLCRARGRLQEML-----------------
204 UniRef50_Q02AP7 RNA polymerase, sigma-24 su... 42 0.006 1 13.6% 32:112 132:206 -------------------------------REHDIARERDRIVIC------LHDALNALAMEDDVKARLVEMRFFGGMTAEEIAECVSTPVHIVRRELRSAQVWLRREIEA---------------
205 UniRef50_A4XLN5 RNA polymerase sigma factor... 42 0.006 1 19.0% 53:115 116:175 ----------------------------------------------------ICKAILSL---DYKLRAVFILKHFYGYKYKEIAKILNCPVGTVRSRLHFAIKFLVKELEKKGV------------
206 UniRef50_D1XKT7 RNA polymerase, sigma-24 su... 42 0.006 1 15.1% 2:107 91:196 -RDPEKTL----AYLRQTVVNLSRSALRRRILGLKLLSKPMPDMASAEEglERDALIKAMKGLQRRQREVLVLRYFSDMTEAQVAETLGISLGSVKAYGSRGIAALR--------------------
207 UniRef50_C0ZI65 RNA polymerase ECF-type sig... 42 0.006 1 18.5% 48:112 105:166 -----------------------------------------------DELIDLRDAVERL---DEQQRLVIVLHYFEDMPLRQVAEILEISESAAKMRLSRARNNLMEKLHT---------------
208 UniRef50_UPI000197305F RNA polymerase ECF-type sig... 42 0.006 1 23.1% 47:111 117:178 ----------------------------------------------EEERQRIRDAVDRL---DEKHRTVLILYYFNEFSTRTIARIMGCLEGTVKSRLFTARRKIRAELM----------------
209 UniRef50_C3RNS5 Conjugative transposon prot... 42 0.006 1 21.6% 60:110 117:167 -----------------------------------------------------------LYKLSSKERDVILLRYFQSMSDQEIAELYHVSRSAIYRRRSNGLKKLKTVL-----------------
210 UniRef50_Q484H9 Putative uncharacterized pr... 42 0.006 1 15.3% 34:105 117:189 ---------------------------------LPQEEKQPEYDCNIAETMclERVYNALVQEKPRAAELLQLNVFAGLNAKKIADMYNISLRTVQNELKFAHAW----------------------
211 UniRef50_A8RQ09 Putative uncharacterized pr... 42 0.006 1 18.0% 9:119 69:188 --------EYFGNWLYKTLTREAWRYCRKNRKEQPVEEVFGKEE--PETASVLEEVMMriRNLPVKQRTAVVLYYFNQMSTREIAGIMGCLEGTVKSRLYTARANLKQEleRKRVGREV--------
212 UniRef50_A6TPP5 RNA polymerase, sigma-24 su... 42 0.006 1 19.4% 48:114 72:135 -----------------------------------------------EEAKAIKQKVDALPDIQK---DAIILYYYHDMKAKDIAKIMGVSLPTVKSRLKQGKDKLKKMFSEED-------------
213 UniRef50_D1V958 RNA polymerase, sigma 28 su... 42 0.006 1 17.6% 60:110 339:389 -----------------------------------------------------------LEKLPPREKRILLLRFFGNMTQSQIAIELGISQMHVSRLLARTLAQLRRGL-----------------
214 UniRef50_B0P0F0 Putative uncharacterized pr... 42 0.006 1 17.9% 37:114 105:186 ------------------------------------GNDISRNLIDPEDLFilDSLKIIFSTLTPDFRDTIIFHYFYGFKYSEIACMFHISERAVKKRIAVAKKRVRTMFQKED-------------
215 UniRef50_A6G924 RNA polymerase sigma-70 fac... 42 0.006 1 15.8% 71:127 134:187 ----------------------------------------------------------------------LELHYWEHMSDREVALALGVAHGTMKSRLRRGRKLLAERLETMNVG---DVLLESTS
216 UniRef50_C6PXW0 RNA polymerase, sigma-24 su... 42 0.006 1 18.3% 48:107 145:201 -----------------------------------------------EDKIVIEGLLNTLKN---DEREILVLRYLKDYSIQDVAEIMDIPINTVKTKIYRALNFLR--------------------
217 UniRef50_A3TPC7 Putative RNA polymerase ECF... 42 0.006 1 15.3% 56:114 118:176 -------------------------------------------------------VIDALRTLPRRQRDCVTLRYYLDLSIPDIAETLGLSANTVKTHLQRGLASLAQTLEANR-------------
218 UniRef50_UPI0001C378AC ECF subfamily RNA polymeras... 42 0.006 1 16.7% 45:110 112:174 --------------------------------------------ICEEQKIELHRAISKLY---PEYGQVLYLVYFEGFDNTETARIMKKTKRQIEKLLYNAKQALKNEL-----------------
219 UniRef50_UPI00016C377D RNA polymerase, sigma-24 su... 42 0.007 1 24.6% 48:116 122:187 -----------------------------------------------EDERQLHGAIARLSSEHRE---VLLLKDIDGLKYEDIAEALGVPIGTIRSRLHRARLELRDLLAAPDER-----------
220 UniRef50_UPI00016C427A RNA polymerase sigma-H fact... 42 0.007 1 17.4% 47:115 128:193 ----------------------------------------------DDAGAVVDEELSGLPARYREP---LVLCEVQGLSRRAAARELGVAEGTLSSRLARGRKLLRERLSRRGV------------
221 UniRef50_D1SBY5 RNA polymerase, sigma-24 su... 42 0.007 1 13.6% 27:107 1:78 --------------------------MAERLDATPAERGGGDH--TDETALRLS-VVGALRRLTTRQRAVVVLRHYEDLTEAQVAEVLGCSVGTVKRHGHEAVRRLR--------------------
222 UniRef50_C7QFT3 RNA polymerase, sigma-24 su... 42 0.007 1 21.2% 13:111 58:156 ------------GWVRSTaaVSRWRHHTAGLRAFMRHGAPGEMAPPSADTIAVRDALAELPK---GLRAALVMYYLGGMQVAEVATALDLPQGTVKARLSRGRAAMAVMLT----------------
223 UniRef50_C1ZN14 RNA polymerase sigma factor... 42 0.007 1 17.6% 59:109 130:180 ----------------------------------------------------------QLSQFDPELAQMIDLRYQQSWTLDRMAEFLGLSIATVDGRLRRAINRLKKA------------------
224 UniRef50_Q7UFE5 Putative uncharacterized pr... 42 0.007 1 16.3% 57:105 137:185 --------------------------------------------------------LERLFKVDPDSAKLVELRVFAGLSITEAGELMKMSRSTAYRNWEFARTW----------------------
225 UniRef50_C0ZB38 RNA polymerase sigma factor... 42 0.007 1 13.0% 54:107 116:169 -----------------------------------------------------DQLVAEVLQLSPLYRQVIALHYYADLSIGEVAEVLGVTEGTVRTRLHRARQQLR--------------------
226 UniRef50_D2ASW7 RNA polymerase, sigma-24 su... 42 0.007 1 25.4% 52:110 120:175 ---------------------------------------------------ALAEAIARLGR---GERDVLLLTALAGLSHEEIAAALGISYGTVGSRLSRARAKIRAAL-----------------
227 UniRef50_P46358 Probable RNA polymerase sig... 42 0.007 1 22.2% 48:110 119:184 -----------------------------------------------EQALQVEeaLEIMSALPNDSREILLLYYREGQRSQQVASLLGLSDAAVRKRLSRARATVRNEL-----------------
228 UniRef50_UPI00016C41AC hypothetical protein GobsU_... 42 0.007 1 14.2% 12:117 88:197 -----------GGWLYSVAHRLALRTRADAARRERIEGQWTGPAAAEPPDLAVREVADVLhnRLPDALRllLLCYFDGMTRDEAARELGVGVDVLRGRLERGRSRLHAKLLRRGVSL----------
229 UniRef50_A5VCC1 RNA polymerase, sigma-24 su... 42 0.007 1 22.6% 60:112 124:176 -----------------------------------------------------------LDRLDADQRALVLAAYLNGESREELAERLGHPTGTIKSWLHRSLARLKGCLDG---------------
230 UniRef50_A4XGS0 RNA polymerase, sigma-24 su... 41 0.008 1 21.4% 48:103 112:164 -----------------------------------------------EDLDHLARAVLKLPVIYK---DVLTLKYVQEFSNEEIAKMLDISEATVRKRLERAK------------------------
231 UniRef50_UPI00016984C8 Sigma-70 region 2:Sigma-70 ... 41 0.008 1 17.2% 48:111 27:87 -----------------------------------------------EEGRRLNDCLEQLKAN---QRQVIVLAYFKGLTHEELSQQTGTPLGTVKTWIRRGLDQLKRCLE----------------
232 UniRef50_Q1IW21 RNA polymerase sigma factor... 41 0.008 1 12.3% 60:116 137:193 -----------------------------------------------------------MRQLPPEQRDAVTLRELSGLDYAEIAEVLGVELGTVKSRLNRGRAALRALLAGIGVT-----------
233 UniRef50_B4ACX4 Possible ECF family DNA-dir... 41 0.008 1 23.8% 48:110 106:165 -----------------------------------------------DDLYDLDKGLHKL----PDNYRvlVMYYYVGFSIKEIAQQLDVSTNTIKIRLSRGRKKLRIYL-----------------
234 UniRef50_C7QCS7 RNA polymerase, sigma-24 su... 41 0.008 1 16.5% 9:111 48:159 --------QRWgaWVRTVAYRIAVSSWRRTANRLRAHRRGARAE--EEPGASPDRliAALRAIPAEQRRVIVLHHLVGLSVEEVAQETGAPIGTVKSRLARGRRALAGHVS----------------
235 UniRef50_UPI0001B9ECB9 RNA polymerase, sigma-24 su... 41 0.008 1 22.4% 49:115 105:171 ------------------------------------------------DAAAVSQIWKCVMELPPKYREVLILEFHYQLPRKEMAQLLDLSEGTIKSRLHRARARMETMLKGADI------------
236 UniRef50_C5EFA1 RNA polymerase n=2 Tax=Clos... 41 0.008 1 17.3% 9:112 82:192 --------EHFSSWLYKTLTREAWRICRKSRREQPVEEVYGEEE--PQASSVLDEVLAH--SRDDELYrvVVFYYFNQMSTKEIAGIMGCMEGTVKSRLYTARINLKRELTR---------------
237 UniRef50_Q24Z61 Putative uncharacterized pr... 41 0.008 1 17.9% 55:110 110:165 ------------------------------------------------------EIMKELLELPPMYRSVIYMYYYEGYTTKEIALILGKRESTIRSQLTRGRALLKTIL-----------------
238 UniRef50_A6NPX5 Putative uncharacterized pr... 41 0.008 1 14.0% 61:110 29:78 ------------------------------------------------------------EDVTPHQRQALLLYYAEGLNMREIGEQLGVDKSTISRTIKRGERRLRRCL-----------------
239 UniRef50_B8I535 RNA polymerase, sigma-24 su... 41 0.008 1 18.5% 47:111 114:176 ----------------------------------------------DDES--FNELKMKLCKLNKEYMEIIMLKHLYDLSNNEIADVLCISCDAVRQRLSRAKKAIKKVIE----------------
240 UniRef50_A6G2K5 RNA polymerase sigma factor... 41 0.008 1 20.7% 56:113 98:155 -------------------------------------------------------LLEALRHIPVELQVALELRYWEQMTEAEIAMTLGIPLGTLKSRLRRARQLLAERLRMS--------------
241 UniRef50_UPI00016C5360 RNA polymerase sigma factor... 41 0.008 1 17.6% 50:117 117:184 -------------------------------------------------GEAVEQLKGALSELKPLDRQTLEAFYIRGRSLKQIAKEFAVPTGTVKRRLHVARQRLKEVLEEIDPTL----------
242 UniRef50_UPI0001C37B48 ECF subfamily RNA polymeras... 41 0.008 1 18.2% 24:122 87:190 -----------------------YRSLSalFPKAAESEISSLPSDTdnEIRKI--VIDMIEKLGEPDSSIIILKYYYGRNSNEISRKLSISPATVRKRSERALKRLKKLLSENNI---MDQE-----
243 UniRef50_C6W8I8 RNA polymerase sigma factor... 41 0.009 1 13.0% 42:110 87:156 -----------------------------------------RPVPPDTeaEHRQNLIPALQELPPRQRAVIVLRFVHDLSVEQVAQTMGCTQGTVKSQTSRGLEALRRAF-----------------
244 UniRef50_Q82WV3 Sigma factor, ECF subfamily... 41 0.009 1 14.1% 34:111 127:197 ---------------------------------TDPARLVAARQLLEKLCIAIDAL-------PPQCHRAFVLHKFDGYSHAEIAEKLGITRNAVEKLLIRALIRLRQVLV----------------
245 UniRef50_Q7UMX2 Probable ECF sigma factor A... 41 0.009 1 18.2% 52:117 166:228 ---------------------------------------------------AMSQAIGQLS---EEQQNVIRLRYVDGMPTKQIAEQLGKTDVSIRVLLSRSMRQLEKQLEANRPTR----------
246 UniRef50_A4FLE7 RNA polymerase sigma factor... 41 0.009 1 18.9% 60:112 210:262 -----------------------------------------------------------LAELEERERRILVMRFFRGMTQTQIAEQVGISQMHVSRLLSRTLAWLRERLET---------------
247 UniRef50_D0MD44 RNA polymerase, sigma-24 su... 41 0.009 1 17.5% 52:114 114:173 ---------------------------------------------------AIERALAQLPETRRTIF--LLSRY-HGLSYREIAEVMGISVKTVETQMGRALRFLSQYLHPLT-------------
248 UniRef50_A5ZEP0 Putative uncharacterized pr... 41 0.009 1 18.9% 25:119 85:169 ------------------------SQLINKIKESDSQQPDSRILC----------IRKAMKKLTPYNYYILEACYIHNKKYKEVAEELNVSVAAIHKNIVKALRILREELGQKGNQNEF--------
249 UniRef50_C7M0J5 RNA polymerase, sigma-24 su... 41 0.009 1 15.4% 8:111 74:179 -------LRTWLATLAHRRAVDAVRHDAALRRREDRDHQLTRPPTTAEIEVVMDRVidALASLSEQERRAIELAYFDGLTYREVAARLEEPEGTVKSRIRGALTKLHRQMV----------------
250 UniRef50_B9L3F7 RNA polymerase, sigma-24 su... 41 0.009 1 21.8% 60:114 132:186 -----------------------------------------------------------LAELDSGLREVLELAYFSGLTQREIAERLGLPLGTVKTRVRTALRRLAEALAGDR-------------
251 UniRef50_B9XBJ5 RNA polymerase, sigma-24 su... 41 0.009 1 18.2% 53:107 122:173 ----------------------------------------------------LDAALGELSETDR---DILLFRYFQGKSAREIAQTLGLTDEAAQKRVNRAVERLR--------------------
252 UniRef50_Q1IV01 Sigma-24, ECF subfamily n=1... 41 0.009 1 17.2% 22:114 70:156 ---------------------RRMPHDQTSLDDIDPAAPHKEPQLGLNDLFRKCSSLTPLHRV------CVTLRYVHGLTRAEIAAKLGLSETQVKGHLQYALHLLRTALTGGK-------------
253 UniRef50_C7MRI6 RNA polymerase sigma factor... 41 0.009 1 16.4% 56:110 144:198 -------------------------------------------------------VVQALSKLPPRQREVLVLRYYGGLSEAEISEAAGISRGTVKSTASRALEALQRAM-----------------
254 UniRef50_A8SKN1 Putative uncharacterized pr... 41 0.009 1 16.7% 15:110 48:142 --------------SYNNNTGSDFNVVENKRLNLISEQIALSQQlvEYEYMEIKKGLSYL---NKEEYEIIEMRYFKRWSIEKIENNKYISKSSIYREIEKALIKIIERL-----------------
255 UniRef50_B1HX03 Putative uncharacterized pr... 41 0.009 1 16.1% 56:111 99:154 -------------------------------------------------------VLTEIFELSPEERVIVYLHYYEGYTTVEIANLLGMNGNTIGSKLRRARMKLKTILE----------------
256 UniRef50_A6NVZ3 Putative uncharacterized pr... 41 0.009 1 16.3% 13:110 59:152 ------------AWLMRVAINLCKNQLSAPWKRRWEELDEDQP-CFDQEESAVLEAVNGLPVKYRE---VIHLYYVEGYSTAEIASLLGRGEGAVRVQLSRGRERLRRVL-----------------
257 UniRef50_C1ZJD3 RNA polymerase sigma factor... 41 0.009 1 24.6% 58:114 170:226 ---------------------------------------------------------AALTELPVDQAEVVILKFWEGMTFQEIASVMGESPNTVASRYRYAIAKLARLLRALE-------------
258 UniRef50_D1CEP2 RNA polymerase, sigma-24 su... 41 0.009 1 16.3% 13:110 68:166 ------------RWSR-DRARDYRRMEIVGQDLSNRLELMEDPELseELATILDEALRHLPAETR---SILLQHVVEGMPQADIARKLGISEGAVAVRIHRGKLLLRKIL-----------------
259 UniRef50_A7HUA1 RNA polymerase sigma factor... 41 0.010 1 16.2% 32:111 130:219 -------------------------------RERRPDFDPSDPMLQPEEARPADEEMaaLVTLPPDQAEVVELSFLEGLPHSAIAERLDIPLGTVKSRLRLAFARLRPALE----------------
260 UniRef50_A1TEV0 RNA polymerase sigma factor... 41 0.010 1 15.6% 15:110 101:193 --------------VRSEQAASTRESRYGAISVDPPSDHVADDVLLDDERRRVAGCLDSLTDVQRE---CIQLAYYDGLTYAQVADRLAANLATIKSRMRDGIRALRKCL-----------------
261 UniRef50_UPI00016C4E23 hypothetical protein GobsU_... 41 0.010 1 17.8% 15:115 97:189 --------------ARRDGRGVALAPDTAGPIERPPDSSERV-----ELAAALDDELSRL---PEHLRGPVVLCLVGGRTQEQAAAELGSSVRTLRRRLERAKAALRARLERRGV------------
262 UniRef50_Q2RHE6 Sigma-24 (FecI-like) n=1 Ta... 41 0.010 1 13.1% 54:114 127:187 -----------------------------------------------------DRLHRLIQALTPEYRVVVIMRDLQGFSYEEIASHLGCPVGTVKSRLSRARHFLRQHLVQER-------------
263 UniRef50_C8VXG2 RNA polymerase, sigma-24 su... 41 0.010 1 20.0% 43:107 98:162 ------------------------------------------PSNNSNDALQDEALLLEIMKLSSKYKEVILLFYYQDMKIREIAEVLKTPEATISIRLKRAREILK--------------------
264 UniRef50_D2PM14 RNA polymerase, sigma-24 su... 41 0.010 1 16.4% 5:114 47:167 ----EALARAWSKWGQYDATRGSASaiTADQARKAARRVRPVADLADHDGVavEQALGVLSARQRLAVDC---YYFADLSVADTAAVMGCSEGTVKSTLSDARARLRRLLEVSE-------------
265 UniRef50_A8SWM6 Putative uncharacterized pr... 41 0.010 1 28.6% 67:108 140:181 ------------------------------------------------------------------QYQTIIMYYFDGMSTSEIAACMECPEGTVSYRLSAARGKIKA-------------------
266 UniRef50_D2MK89 RNA polymerase, sigma-24 su... 41 0.010 1 19.2% 58:109 131:182 ---------------------------------------------------------SLLKKLPESERTVVTLFYLAEMSGAEISQFLGVSPNTVRSRLHRARQRLEKE------------------
267 UniRef50_A6TP54 RNA polymerase, sigma-24 su... 41 0.010 1 18.6% 56:114 122:180 -------------------------------------------------------ILEQINHLNSHYKEVIILYYYVELSYDEIGTALNISPGTVKSRMFRAKKILKSKIMIAE-------------
268 UniRef50_A9FK16 ECF-family RNA polymerase s... 41 0.011 1 15.5% 52:109 140:194 ---------------------------------------------------ALHRALDRLSTRRRMAF---VLRHVQGLEMLETAAALGVSESTVRRELESARAFLLKA------------------
269 UniRef50_B5HYZ4 RNA polymerase ECF-subfamil... 41 0.011 1 21.4% 8:110 82:191 -------LEQ-GAWarGPAFVINGPIAQALDTALVTARDKLQKM---ESASGLYEAIADLPD---RQFEVIVLRYVLGYPTAKVAWYIGIDDRTVGHHLRRAKERLRLKL-----------------
270 UniRef50_A4FQL5 RNA polymerase, sigma-24 su... 41 0.011 1 17.0% 56:108 136:188 -------------------------------------------------------VVAALAELPPRQREVLVLRYYGDLSEAEIAEATGVSKGTVKSTASRALDALQR-------------------
271 UniRef50_Q67QA6 RNA polymerase ECF-type sig... 41 0.011 1 22.0% 54:112 150:209 -----------------------------------------------------SQAVARAVRALPDGfeTVVLHYFEGLDAAEIARITGVRVGTVHSRLHRARQLLRRQLEA---------------
272 UniRef50_A9FFY4 ECF-family RNA polymerase s... 41 0.012 1 15.9% 49:111 218:281 ------------------------------------------------EGMQLEAVVKriGQLDPEFREALILRDVEDMSYEEIASVTGLPDGTVKSRIHRARGQLRALVE----------------
273 UniRef50_Q04U83 RNA polymerase sigma factor... 41 0.012 1 18.2% 42:107 132:193 -----------------------------------------KIELSDESNYLISKilEDLYK------EVIELRYFEEMSYAQIAEVLGTNVGTVKSRLFKAKEFLK--------------------
274 UniRef50_C0Z4L0 RNA polymerase ECF-type sig... 41 0.012 1 15.1% 59:111 123:175 ----------------------------------------------------------QMMTLDKNHRAILDLHYLQHLSYREIGNKLSLSVDTVRMRLSYARKKLRDQLS----------------
275 UniRef50_UPI00016952BB RNA polymerase, sigma-24 su... 41 0.012 1 15.1% 56:108 120:172 -------------------------------------------------------VVQMMTQLPPNYRKTVELYYFYDKTYQDIAEEEGISVKTVESRLYRAKQWVRA-------------------
276 UniRef50_A5I7E4 Putative glucitol operon re... 41 0.012 1 23.0% 60:120 1:58 -----------------------------------------------------------MKYDDRILYKVAQMYYIDNMTQSEIAKRLGQYRTTISRMLKKAR---EEGIVTINIKNNFD-------
277 UniRef50_C6PEP5 RNA polymerase, sigma-24 su... 41 0.012 1 16.1% 55:110 121:176 ------------------------------------------------------RVSEKVKELKTEYADIISLKYYYGYSNKDIANLLNITEDNVRVRLYRARQSLKNAL-----------------
278 UniRef50_C6W4C0 RNA polymerase, sigma-24 su... 41 0.013 1 9.3% 54:107 126:179 -----------------------------------------------------EEILELIQRIKPVYKNVFLLYVVDGYNHREIADLLQINEATVRSHYVRARARLQ--------------------
279 UniRef50_A8LDH0 RNA polymerase, sigma-24 su... 41 0.013 1 10.0% 15:114 197:299 --------------ARSGRARLEFPT-ADLLAAADGHPGAGAAVPGPEDAVliREVLEALGTLGPEQRECVTLRFLEGLSVRETARAMNKKEGAVRALQLRAVRTLARHLPTAR-------------
280 UniRef50_A6W1G9 Putative RNA polymerase ECF... 41 0.013 1 22.2% 51:113 126:188 --------------------------------------------------LSIEKLLLKLESNYSRQVEIFKLKQLVGLSTKELTELYKCSDSLIEKDLLFVRRWLKSKLHTS--------------
281 UniRef50_A6TQA4 RNA polymerase sigma factor... 41 0.013 1 16.0% 48:97 190:241 -----------------------------------------------DDSEVIDKIMLkiGRLEPRERQIIILRYFKDKTQTEIAKVLGISQVQVSR------------------------------
282 UniRef50_D2MLJ7 Putative uncharacterized pr... 41 0.013 1 16.7% 54:107 84:138 -----------------------------------------------------HEIVKNLLQRLPeeRTVVTLHYLGEMTAKEIGKFLGVSANTINSRLRRAKKRLQ--------------------
283 UniRef50_C4DIN0 RNA polymerase sigma factor... 41 0.013 1 14.5% 56:110 125:179 -------------------------------------------------------LVEALRQVPEKQRRAVVLHYLGDMSVADIAAQTGAKEGTVKSWLHRGRSELARYL-----------------
284 UniRef50_Q3BMR1 RNA polymerase ECF-type sig... 41 0.013 1 14.3% 48:110 126:188 -----------------------------------------------EALMLVADAFDKLAQVDERKARAFALTELVGFSVAEAAEQLEVSVPTLERDLRFARVWLAAQL-----------------
285 UniRef50_B4CW59 RNA polymerase, sigma-24 su... 41 0.013 1 21.2% 26:110 124:206 -------------------------NIAPGAATAPKSEMEPAERISDKEIrrIDEAIAKLS---PEHRTAIVMREIDGLEYTEIAEQMGCSLGTVMSRLFYARKKLQALL-----------------
286 UniRef50_B8GMC2 RNA polymerase, sigma-24 su... 41 0.013 1 16.9% 49:113 152:213 ------------------------------------------------DAVLLRECLKQLR---EDQRRCIEIAYFEGLSHGEVAERTGNALGTVKTWIRRGLQELRRCLDAS--------------
287 UniRef50_Q1AW69 RNA polymerase sigma factor... 41 0.013 1 16.9% 48:112 199:263 -----------------------------------------------ETAELRERLAEALESLSERERVVITFYYYQGLTLREIGRALNLTEGRISQILRRALQRLRDRLSG---------------
288 UniRef50_B2A1W3 RNA polymerase, sigma-24 su... 41 0.013 1 23.2% 60:115 119:174 -----------------------------------------------------------LKDLHPQDRLIIHLKYYMGYTLDEIAGLVNLPEGTVRTRLYKNLKILRKKLEIKEV------------
289 UniRef50_C8WTP6 RNA polymerase, sigma-24 su... 41 0.014 1 17.6% 47:114 108:174 ----------------------------------------------DAASLRID-LERALAKLSPEHRTVIVLRAFHGLEYDEIAEVLDIPIGTVRSRLHHARMQLRMYLSGER-------------
290 UniRef50_C7QA49 RNA polymerase sigma factor... 41 0.014 1 19.0% 52:114 352:411 ---------------------------------------------------LLARAVNSLPERDK---TVVTLYYFEGMTLAQIGEVLGVSESRVCQIHTKAVLTLRGKLSAKE-------------
291 UniRef50_UPI0001C37DE6 hypothetical protein RflaF_... 41 0.014 1 15.3% 53:111 111:169 ----------------------------------------------------FDSVIEAIGHLKDECRDVLMLKFVYGYNTREMSDILGITSDNIYKRIQRAKAELARIIE----------------
292 UniRef50_B2TK38 RNA polymerase sigma-70 fac... 41 0.014 1 22.7% 60:103 180:223 -----------------------------------------------------------LNVIDKDLRELIVLYYFDDTPQKEIAKILNINEVTVRTRLLRGR------------------------
293 UniRef50_A6GKI7 Sigma-24 (FecI-like) protei... 41 0.014 1 17.3% 20:117 112:198 -------------------SDPRFLAYAYSCPESAAARDGLR------DGLR--KALAELAEVDRK---VFVLRELEGLTAPEIAETLGLTVSAVKSRLHRARAQLRGACSRLDVAL----------
294 UniRef50_C3RL12 RNA polymerase n=2 Tax=Bact... 41 0.014 1 13.9% 13:113 62:158 ------------RWLLRVCINLCKNNLKSYWKRNVSVFEEEFYQLENSD-LKLQELVFKLA---PKYKGVIHLYYYEGYSVKEISVILKISEAAVKQRLKRARTKLKIELEAE--------------
295 UniRef50_A0NZ04 Sigma-24 (FecI) n=1 Tax=Lab... 41 0.014 1 17.2% 34:120 99:190 ---------------------------------LDPEDPSLQPTPLPDIAEEMdrVRAALSQLPEEQRNVVRLAFFAGQSHSEIAEYTGLPLGTVKSRIRLAFGRLRQLLET-DSSVDVD-------
296 UniRef50_B9XLI4 RNA polymerase, sigma-24 su... 41 0.015 1 12.4% 14:110 83:172 -------------WWRGESRRQRREQTAIALETTMKTPAADSHALSD----ALDEALLALPERDRQA---LLLRFFEGRNHREVGLALGIGEDAARKRVDKALDQLSGIL-----------------
297 UniRef50_UPI00016C52BB WD-40 repeat n=1 Tax=Gemmat... 41 0.015 1 19.4% 48:119 142:210 -----------------------------------------------ELGGVLDEELGQLPARFREP---LVLCYFQGKTHADAARQLGCPVGTVSGRLARACELLRDRLARRGVALAV--------
298 UniRef50_A6WZK6 RNA polymerase, sigma-24 su... 41 0.015 1 12.7% 42:112 114:181 -----------------------------------------KEVLARDEGRRIDDC---MRELDQVHAKAVRQAYVEGLSYLELAQELQVPLNTVRTWLRRSLLKLRECMQR---------------
299 UniRef50_B9XQQ4 RNA polymerase, sigma-24 su... 41 0.015 1 15.6% 53:116 129:189 ----------------------------------------------------LDKALGELSEPDR---DALLLRYFERKSAREMAQALGVSDEAAQKRVNRAVERLRELFSKRNVT-----------
300 UniRef50_C7I208 RNA polymerase, sigma-24 su... 41 0.015 1 20.3% 37:110 101:182 ------------------------------------DEADDPPEIADdeALlmEDCLGQLQ---PRQRDLLAATYVLGQSHAEVARERALPLGTVKTLIRRAVLFLRDCL-----------------
301 UniRef50_B8EQK9 RNA polymerase, sigma-24 su... 41 0.015 1 17.0% 52:104 109:158 ---------------------------------------------------ALDRALEELT---PRARQIFLMHRVYGASNMEIARRLGISVSAVEKQLARALR-----------------------
302 UniRef50_C6VSK7 RNA polymerase, sigma-24 su... 41 0.016 1 17.9% 29:106 98:172 ----------------------------SRFTDLDEAGDIMPEQPDDYRYALIDEAIDRL---PPQQRQVYMLSRHQRLSYSEIALRMGLSRETVKKYLQIATASI---------------------
303 UniRef50_D0D7I5 Transcriptional regulator, ... 41 0.016 1 17.5% 64:103 9:48 ---------------------------------------------------------------DRIVAEIAWLYYIKGYNQAEIAKRMNLSRPTVITYLRLAR------------------------
304 UniRef50_A9GGR2 RNA polymerase sigma factor... 41 0.016 1 16.9% 47:111 249:319 ----------------------------------------------DDPIEAISAQATriARLPERERRVIGMYYFEGAKLKDIGAELGIGEPRVSQLHTRALGMLRGMLS----------------
305 UniRef50_C4XNK9 RNA polymerase ECF-type sig... 40 0.017 1 15.2% 16:107 88:176 ---------------KQGRVEIPASALHDGFMENIQDE-------TADDALiidkLFAAMDALGLETREVLILRYQEGLSIQDIADALKISVSAVKMRISRGLERLR--------------------
306 UniRef50_A9G5S7 ECF-family RNA polymerase s... 40 0.017 1 21.6% 69:119 183:233 --------------------------------------------------------------------DVVLAHYHEDLGLQEIAQKLAVSESAVRSRLHRARVRLRAILNATAFGREI--------
307 UniRef50_D1CEA8 RNA polymerase, sigma-24 su... 40 0.017 1 20.3% 50:118 126:194 -------------------------------------------------GIRRNIVLEALRELPENQRKVLEMSYFGGLTQSEIADKVGEPLGTIKTRMRLALQHLRRNLIEKGIKPE---------
308 UniRef50_UPI000178951B RNA polymerase, sigma-24 su... 40 0.017 1 11.9% 54:112 118:176 -----------------------------------------------------DSVWGALQGLEEKSKSVVVLHYLSEWSMKEIGQFLNMSVSAVESRIRRAREVLKQHLAR---------------
309 UniRef50_A6GAW6 RNA polymerase sigma-70 fac... 40 0.018 1 19.0% 56:113 123:180 -------------------------------------------------------LLVAMRHLSLEMQIALELHYWEGLSVREIALVTETPEGTIKRRLQRARMKLDELIVQL--------------
310 UniRef50_Q2BDP2 RNA polymerase ECF-type sig... 40 0.018 1 15.5% 28:111 90:174 ---------------------------ILRKKQTVVPVEDIEYYLSddPAQSISEAIGEL---DEKHRAPVILYYYEDFSVKEIAELLEISTGTVKSRLNRARAKLSVYLS----------------
311 UniRef50_Q2JNT2 RNA polymerase sigma factor... 40 0.018 1 23.2% 58:113 146:201 ---------------------------------------------------------AALSQLPENQRQILELLYYQGLSQADIARQLGIPLGTVKTRSRQALCKLRGSLRAL--------------
312 UniRef50_Q0BWZ2 RNA polymerase sigma factor... 40 0.018 1 17.8% 12:112 62:179 -----------GMYDRSQASVSTWIFRIARNRRIDAQRRQRRPELSGDDPIllDTAVrrLTCLPQDQLILIQAAFYDGLSHSEIARAFNLPLGTVKSRIRLAFMRLKGELEG---------------
313 UniRef50_C5RXP4 RNA polymerase, sigma-24 su... 40 0.018 1 18.8% 60:107 31:78 -----------------------------------------------------------LKQLNPTYRQIVVLKYYNDLSENEISKYLSVPLGTVKNRLYRARMFLR--------------------
314 UniRef50_A3ZWG0 Probable ECF sigma factor A... 40 0.019 1 20.3% 58:116 145:203 ---------------------------------------------------------AALAELREDQREVIRLKYVEGWPSKDIANELGKSDAAVRVLLTRTLKQLQAVLAEQELR-----------
315 UniRef50_C6BBI9 RNA polymerase, sigma-24 su... 40 0.019 1 15.4% 48:112 209:270 -----------------------------------------------QQARALAECLKRL---DPKQRQVVSLAYLRDLSHSELAQALSLPLGTVKSWMRRGLDRLRECLGA---------------
316 UniRef50_B5Y6J6 RNA polymerase sigma-E fact... 40 0.019 1 16.7% 55:114 114:173 ------------------------------------------------------ELLNALSRIPTDQRDCIVLKYYYGFTSREIAEMLKVKEPTVKARIRYGLNKLSILLKGEE-------------
317 UniRef50_C6PW47 RNA polymerase, sigma-24 su... 40 0.019 1 13.3% 48:107 107:166 -----------------------------------------------DELTLKEGIMQEISRLSEDFKEVVLLHYFQNLKLREIAEILDIKLSLVKYRLSEGKKFLK--------------------
318 UniRef50_Q67L47 RNA polymerase ECF-type sig... 40 0.019 1 22.2% 58:111 140:193 ---------------------------------------------------------AALRRLPPAERELLIRRYFFEESVAEIARDLGLSRGALDTRLWRARQNLRRLLS----------------
319 UniRef50_C5WFG0 DNA-directed RNA polymerase... 40 0.019 1 15.2% 65:110 112:158 ----------------------------------------------------------------PEKYRMVllYYFDGLSVKEIASILHKSLSSVKINLMRGRALLKEKL-----------------
320 UniRef50_A7VU01 Putative uncharacterized pr... 40 0.020 1 20.5% 31:113 61:141 ------------------------------VRRYIPLEDAEHLTAADDPAAF--ELLAAIRKLPDKLHAVMVLHYLEGLSVEETASCLRISIPAAKMRLARGRQRLKELLGAE--------------
321 UniRef50_UPI00016C3FE9 RNA polymerase, sigma-24 su... 40 0.020 1 14.5% 46:114 122:188 ---------------------------------------------TDTDARlvDAALSALPRKYREP---VILCHLQGWTRRELADHLGCPESTAASLVARGLAKLRRRLAGRE-------------
322 UniRef50_A9BQK2 RNA polymerase, sigma-24 su... 40 0.020 1 20.3% 39:107 98:162 --------------------------------------PTPSPSALDDRL----DVVKALARIAPIHREVLVLYYFDDMPTAQMAEALDIAPGTVLSRLSRARDALK--------------------
323 UniRef50_C7QIZ2 RNA polymerase, sigma-24 su... 40 0.020 1 17.1% 41:110 95:163 ----------------------------------------DRPAVQDDAAVRL-TILAALAELAPRTRAVVALRYWEDQSVEQTAEALSISTGTVKSMSARGLAQLRERL-----------------
324 UniRef50_A1SKP0 Sigma-70 region 4 domain pr... 40 0.020 1 20.8% 47:118 96:164 ----------------------------------------------DTDRMALRQALATLA---PRQRAVIVLRYYEDLTEKETAAVLGISVGTVKSQARDALARLRATAPHLDDERE---------
325 UniRef50_UPI00016C3B4B WD-40 repeat n=1 Tax=Gemmat... 40 0.020 1 16.2% 50:117 129:193 -------------------------------------------------LLALDEELERLPPLYREP---LVLYHLEELTRDEIAARLGVPNATVKIRLERGRARLRTALTRRGVAL----------
326 UniRef50_B8CQF6 DNA-directed RNA polymerase... 40 0.020 1 15.0% 54:113 132:195 -----------------------------------------------------DEAIEGLkkLPPLEGQVLHLFYLEEQSIAEIARILEIPKGTVKSRLFRARKLFKQHLEQE--------------
327 UniRef50_D2B4L5 RNA polymerase, sigma-24 su... 40 0.021 1 12.7% 53:107 96:152 ----------------------------------------------------VDRIVLrlMRLTPRQRAVIVLRFYEDRSERETAELLNCSLGTVKSQTHHALGRLR--------------------
328 UniRef50_A3TGP1 Putative RNA polymerase sig... 40 0.021 1 11.0% 35:116 85:163 ----------------------------------VPERGRSD---SADRVALADQLTTALAQLPVRERQCVVLRHHADLSEREVADTLNISTGTVKSSTSRGLARLRTLLATEGVR-----------
329 UniRef50_C4RGL0 RNA polymerase sigma factor... 40 0.021 1 17.0% 60:112 240:292 -----------------------------------------------------------LATLDEREQKILTLRFYGNLTQSQIADQIGVSQMHVSRLLARALTKLRGQLDG---------------
330 UniRef50_A3TLI1 Putative RNA polymerase sig... 40 0.021 1 13.2% 54:106 111:163 -----------------------------------------------------DSIVHELAGLSDRERTIVVLRYYLDLSERQVAEELDISVGTVKSTCSRAIARL---------------------
331 UniRef50_A8MM86 RNA polymerase, sigma-24 su... 40 0.022 1 18.8% 60:107 138:185 -----------------------------------------------------------LYQLDSNHREVLVLKYITGYSQEEIAEILSIPIGTVKSRIYRGLKLLR--------------------
332 UniRef50_A4JX61 Putative uncharacterized pr... 40 0.022 1 18.4% 2:126 3:129 -RDIEIRLENWGKAQRTGAGGGRAIGSAEG-RYVAPSIEKRVAQVTVIDLLDADEVEQAWRKIMPFDKEVLRMHYILRMDPRVICRKLRIPHrtFNMALSHAKREIEKVLDRMTEKRRAHVARQKE-
333 UniRef50_Q8RD63 Transcriptional regulator, ... 40 0.022 1 20.0% 62:126 6:73 -------------------------------------------------------------HLFQKISLVAELYYTYGLTQQQIADKLQISRPWVSKLLKKAEerVDVITSTSGVK-ELEEEIQKK-
334 UniRef50_Q8ELX2 RNA polymerase ECF-type sig... 40 0.022 1 11.0% 24:114 74:175 -----------------------YRILINESNRLLRKRTRSEVTIDSEQLleLDEAIDELEEHHK---TVIILKYLNGFSEKEIAEILELNQNTVKSRLYQARNKLRSKLGGRE-------------
335 UniRef50_C7Q212 RNA polymerase, sigma-24 su... 40 0.022 1 18.7% 46:120 104:177 ---------------------------------------------SDDAALRL-AVRSALDTLPPRARAVVVLRFWEDLTVDQTADALGITPGTVKSQTSRAIAILRQRLGAAVSELIHD-------
336 UniRef50_B9XLL1 RNA polymerase, sigma-24 su... 40 0.022 1 16.4% 51:117 113:176 --------------------------------------------------RVLDELMHQLKEGDREA---ILLRYFEDRPFAEVGTSLGVSENAARMRVERALEKLRNLLTGRGIVL----------
337 UniRef50_B0P437 Putative uncharacterized pr... 40 0.022 1 15.2% 9:113 53:163 --------RKFKAWIFQILANECYQILRNRKRQEPTdeHSSDYWTEdeDGEILS-YILRMPKQHQE---VLILYYYDEFSTKEIAKILDIPQGTVKSRLARGRKQLKDLLEME--------------
338 UniRef50_A3I721 RNA polymerase sigma-70 fac... 40 0.022 1 21.8% 60:114 90:144 -----------------------------------------------------------LKQLPEKLMAVVTLRFIGELSLVEIAETLKIPVGTVKSRLHKALKIIRKKLEQNQ-------------
339 UniRef50_UPI00016C58E5 RNA polymerase sigma-H fact... 40 0.022 1 19.0% 34:117 124:199 ---------------------------------LPAPDLSWREACD-----LLHAELDRL----PDCYRllLLCYVEGYTRDEAATALGVSSGAVKGRVRRGCVLLGRRLSRWGVSL----------
340 UniRef50_Q7UR06 Similar to RNA polymerase s... 40 0.023 1 19.3% 48:104 149:202 -----------------------------------------------ENAEEVEHLMLRL---DPREASVVRMYHLEGKSYQEISQAVGLSENTIGPLLHRARA-----------------------
341 UniRef50_C6XU99 RNA polymerase sigma factor... 40 0.023 1 18.3% 53:112 110:165 ----------------------------------------------------INKALATLQP----EYYIPFVKYFEGYKYHEIAEMLEIPIGTVKTRIHVARQILKKYLKT---------------
342 UniRef50_B5IJW2 Group3 RNA polymerase sigma... 40 0.023 1 20.4% 58:111 188:241 ---------------------------------------------------------ALLAGLEEPLRQVVERVILAGWSYRRTASALNVSPMTVQRRLHRALALLRGCLI----------------
343 UniRef50_B0MG52 Putative uncharacterized pr... 40 0.023 1 16.7% 53:118 121:186 ----------------------------------------------------LNVMVDKIGRLPTNQQTVLILYYYYGFSFLEIATLLQISELTAKKRCSLARSSLRALFEKEGLSYE---------
344 UniRef50_C9YZP2 Putative sigma factor n=1 T... 40 0.023 1 13.3% 14:111 95:191 -------------WVRSerHRKDARADDSELHAIPDAGPGPDEAVVDResLLLHTALAGLPRPQRE---VVHLAYFAGRTYRQAAVELGIPEGTAKTRLRSALRTLARSLA----------------
345 UniRef50_Q65D80 Putative uncharacterized pr... 40 0.024 1 13.4% 31:127 98:186 ------------------------------LMDRPLQDEGREQEMHADDRIGMLEAVQQLRKEYQTA---IILFYYHDLPIHDIAEVMNAPEGTVKTYLKRAKLELKQLLTGGE-----DAWTNNGS
346 UniRef50_A6GGQ3 Sigma-24 (FecI-like) protei... 40 0.024 1 25.8% 47:112 113:174 ----------------------------------------------DDE----QQLLAALRRIPVEHQVVLELYYWQELTTAQCAEVLEIPHSTIKSRLQRARKLLEEQLEA---------------
347 UniRef50_D1C5W0 RNA polymerase, sigma-24 su... 40 0.024 1 13.0% 35:111 118:191 ----------------------------------DPDPGALDLVLRDDDRRTVAAA---LQQLPPHQRETVVLRFYHDLSLNEIAEVTGVAVGTVKSRLFHGLRRLKTLLI----------------
348 UniRef50_C1P827 RNA polymerase, sigma-24 su... 40 0.024 1 12.7% 11:112 70:176 ----------FASWMSKIVSHLCYDRLKKMRKKviEEEPLRRPTSndNANLRFD-IRSAMEKLSPEHRAAIVLRDIQGYSYEEIADILNIPLGTVKSRINTARNILKKELSR---------------
349 UniRef50_C4VHN7 Sigma-70, region 4 family n... 40 0.025 1 10.7% 52:107 80:132 ---------------------------------------------------LLSEALRHLPENKR---NIILLHYFMDMSDVEIAELLNVNRSTVYRHRISGLAMIK--------------------
350 UniRef50_Q2J6Q1 Sigma-24 n=7 Tax=Actinomyce... 40 0.025 1 18.6% 56:114 127:185 -------------------------------------------------------VIQALRELPRRQREAVVLRYYADMSEADAAAVMGCSVGSVKAYTSRGLSALSGKLEGLR-------------
351 UniRef50_C4G621 Putative uncharacterized pr... 40 0.025 1 23.1% 60:111 129:180 -----------------------------------------------------------LSSLPPDLSGLFIRRYFEGYTSKELAEEYGLSPSGVRAALSRARKLLSKKMS----------------
352 UniRef50_Q2RFZ5 RNA polymerase sigma factor... 40 0.026 1 22.0% 58:107 131:180 ---------------------------------------------------------SALNQLPPEYRTALVLRELQGYSYEEIASILGCSLGTVKSRLNRARQAMK--------------------
353 UniRef50_C7Q8T4 RNA polymerase, sigma-24 su... 40 0.026 1 18.9% 55:107 107:159 ------------------------------------------------------DLIAALRQLPRGQRAVVVLRYFEDRTDEDIAEVLGISTGTVRSQHHKALKALR--------------------
354 UniRef50_A7LV33 Putative uncharacterized pr... 40 0.026 1 14.7% 52:119 113:180 ---------------------------------------------------LMAHVMAKINELPEKRREIFLLSYMEGLKAAEIAERLNLSTRTVENQLYRTLLFLRKELQTAFVYLFM--------
355 UniRef50_A6NQR6 Putative uncharacterized pr... 40 0.026 1 22.2% 49:111 63:122 ------------------------------------------------DNLPLKEAIARLPR---DLRAVVILRYFTGLTLAETAQALDIPQGTVVTRQRRALALLKLELS----------------
356 UniRef50_D1CFU8 RNA polymerase, sigma-24 su... 40 0.026 1 18.5% 49:113 128:189 ------------------------------------------------DQLMIQKAINRL---NPDQQKVIRMRYSQGMKNREIAEVMGRTEGAVKLLIHRATNNLRAQMSGA--------------
357 UniRef50_A6G817 RNA polymerase ECF-type sig... 40 0.026 1 19.1% 46:113 111:175 ---------------------------------------------NDERLQLL---LDAMQQIPLRQQDLLECHYFHGLSMAELAELFELKVGTVKSRMSSARRALLQAFVAL--------------
358 UniRef50_UPI0001788C67 RNA polymerase, sigma-24 su... 40 0.026 1 20.4% 58:111 108:161 ---------------------------------------------------------SLLQQLPDKLMAVVTLRYIGELSMAEIAETLKIPVGTVKSRLHKALKIMRKKLE----------------
359 UniRef50_C1AB78 RNA polymerase sigma factor... 40 0.027 1 14.1% 48:111 136:196 -----------------------------------------------ELGSAIERAIASLR---PEYRACIMLRHVEGRSYEEIATTLDLPLGTVKTYIHRARHELRRALE----------------
360 UniRef50_C0Z5J4 RNA polymerase ECF-type sig... 40 0.027 1 10.3% 54:111 156:213 -----------------------------------------------------EEIVTYIQSLAPKYRQVILLHYYEDLSIAEVADILSVSQEVVRTRLHRARKQLKETMS----------------
361 UniRef50_B1KRU9 RNA polymerase sigma-70 fac... 40 0.027 1 19.0% 52:114 124:183 ---------------------------------------------------EIFEVMNYMKKEDRE---IFIRRYFLDEKVENIAKILGVNRNLIDKRLSRGRKFLKEKLILLK-------------
362 UniRef50_C0GI27 RNA polymerase, sigma-24 su... 40 0.027 1 15.2% 43:108 94:160 ------------------------------------------CSSNDYETVEldEVRQMLNSLDDSHREVLILRYMFGLSLSEISDMKDLSTGTVKSRLFRAREKLRK-------------------
363 UniRef50_D2B866 RNA polymerase, sigma-24 su... 40 0.028 1 18.3% 46:116 95:163 ---------------------------------------------TDVDLRRV--LMDALRALPPRQRAVVVLRYWEDLGETQTAEILGCSAGTVKSQASKALTKLRSAIGAESVE-----------
364 UniRef50_B8FSU1 RNA polymerase, sigma-24 su... 40 0.029 1 22.2% 58:111 107:160 ---------------------------------------------------------MAIQGLSEDLRKVIVLRYFGGYTIADTAALLGIPEGTVATRTRKALRLLRVELS----------------
365 UniRef50_B5HYM1 RNA polymerase ECF-subfamil... 40 0.029 1 18.0% 66:115 124:173 -----------------------------------------------------------------QQRQVLVLRFFADLPVRSIAQELGVPEGTVKSRLHTAVRALRARLHEDEV------------
366 UniRef50_A8R836 Putative uncharacterized pr... 40 0.029 1 16.3% 60:108 102:150 -----------------------------------------------------------LAQLPKKHQSAILLHYLEGYSIKEIAAMLHCSQSAIKMRIARGKAQLRK-------------------
367 UniRef50_A7NRE4 RNA polymerase, sigma-24 su... 40 0.029 1 14.5% 53:114 126:188 ----------------------------------------------------LHQALRrlQALTEEQQQVLLLRFVAGLSIAEAAQQLQRSEGSVKQLQLRGLRALGRMLGAAE-------------
368 UniRef50_A2RP52 Putative uncharacterized pr... 40 0.029 1 18.0% 53:102 40:89 ----------------------------------------------------INKVFEQLNAEHPREYKIIVRHHLKRTYYTTIAREQGVSEGYIRKLAKNG-------------------------
369 UniRef50_C4DUZ6 RNA polymerase sigma factor... 40 0.029 1 14.5% 60:114 152:206 -----------------------------------------------------------LKTLTELQHQAVTMAYYGGHSYRQVANLLGAAVPTVKSRIRDGLIRLRDCLEVSR-------------
370 UniRef50_B4WPS3 Putative uncharacterized pr... 40 0.029 1 15.0% 62:101 173:212 -------------------------------------------------------------QVNEKWVAVLRLKYQEGLSDKAIAHQLGVSARTVRSYWLC--------------------------
371 UniRef50_D1BDV6 RNA polymerase sigma factor... 40 0.030 1 16.7% 58:111 106:159 ---------------------------------------------------------AALQRLSPRQRACVVLRHYDDLTVPQVADELGIAEGTVRRHVADAHAALRGLLA----------------
372 UniRef50_A6TSU8 RNA polymerase, sigma-24 su... 40 0.030 1 15.8% 51:107 132:185 --------------------------------------------------RLIHDAINLLNY---EQRKVIILRDIEGFSYREIAEILDCAEGTIKSRINRARSNLK--------------------
373 UniRef50_Q893M5 RNA polymerase sigma factor... 40 0.030 1 18.3% 48:107 108:164 -----------------------------------------------EDKIIIEELLEKLKK---DEREILVLRYLKDYPIKDVAFIMDIPVNTVKTKIYRSLKFLK--------------------
374 UniRef50_Q1AXH1 RNA polymerase, sigma-24 su... 40 0.030 1 20.3% 49:112 133:193 ------------------------------------------------EALDVAEALSRLS---PEHRELLVLAYFRGLTQREISEATGLPLGTVKSRTSAALRSLRRRLEG---------------
375 UniRef50_Q24VG6 Putative uncharacterized pr... 40 0.031 1 19.4% 36:97 96:155 -----------------------------------TQGVKSSMMRTRQEVIRIERAVETIK--DDEYYDVIPMKYWDGLTIEEIAERLGREEKTIRR------------------------------
376 UniRef50_B6A2T8 RNA polymerase, sigma-24 su... 40 0.031 1 17.0% 28:115 89:174 ---------------------------AQTFRAYAAEPQPDAPGANDDE--LSSELWAAVRALPERQCDAVLLVYGEGLSHSAAADVMGCSETTVSWQVHEARKRLKAMLGKEEV------------
377 UniRef50_C3QA70 RNA polymerase ECF-type sig... 40 0.031 1 21.3% 47:107 123:180 ----------------------------------------------DERMMHISKAMEKLTPHTRH---ILEECYIQRKKYQEVAEELNISVSAVRKHIVKALQVIR--------------------
378 UniRef50_UPI00017455E9 RNA polymerase sigma-70 fac... 40 0.031 1 15.8% 37:112 96:168 ------------------------------------GEASLALSQTDDRVTAARETIAGLS---PLQREILDLRFSQDLSYAEIAQVLGIPVGTVRSRLHHAVAEVRHRLSA---------------
379 UniRef50_C7GAW8 RNA polymerase ECF-type sig... 40 0.031 1 20.0% 55:114 100:156 ------------------------------------------------------EAISRLS---EDARLSVTLYYMEGYSVREIAGILGVTESAVKNRLSRARAKLKNELEQEN-------------
380 UniRef50_Q67R01 RNA polymerase sigma factor... 40 0.031 1 12.3% 12:117 85:186 -----------AWWRRLLPTDDPRAAGTPVEPDTAGDDPEEAVVLSDQRERLLD-YVMQLSDAYRE---VIILYYYHDLTTVEIAEVTGQNENTVKTRLFRARAMLKQMLQKGGVAR----------
381 UniRef50_C6CXS0 RNA polymerase, sigma 28 su... 40 0.031 1 19.0% 33:111 177:251 --------------------------------GDVISDHSDKYSHVDNQ-IALSDAMAQLK---EEERKVLVLVYQHGQSQREIADQLGVSQMSVSRFQKRALDKLRQLLH----------------
382 UniRef50_B1ZUQ2 RNA polymerase, sigma-24 su... 40 0.032 1 24.1% 58:115 112:169 ---------------------------------------------------------AALRQLPAEQREVLVLKLWGELTFAEIARELDLSPNTAASRYRYALGALKEHLTAADC------------
383 UniRef50_C3JBB6 RNA polymerase sigma-70 fac... 40 0.032 1 25.9% 52:109 134:188 ---------------------------------------------------LLHSCVARLPK---EQRDVLILRYHKDMSFKEIADYTGVSINTALGRMRYALMNLRKM------------------
384 UniRef50_A9AXF5 RNA polymerase, sigma-24 su... 40 0.032 1 21.7% 66:111 128:173 -----------------------------------------------------------------KLRSVIVLRYFHDLSYEQIAAILECPIGTVRSRLHTAHAQLRNHLE----------------
385 UniRef50_UPI0001B4EB16 ECF subfamily RNA polymeras... 40 0.032 1 15.9% 38:106 114:181 -------------------------------------RRASRRQLKAQQVSTI-GLYEAIAELPERHYDVVLLTFVLGLERRRVAQLMGISPTTVRSHIHTARRTL---------------------
386 UniRef50_UPI00016C5912 WD-40 repeat n=1 Tax=Gemmat... 40 0.033 1 20.0% 52:116 139:200 ---------------------------------------------------ALDEELAQLPD---DLRAVVLLCYFQGLTQDETAAQLGWTARTVKARVARARGLLRARLTRRGIE-----------
387 UniRef50_Q6MMC2 RNA polymerase sigma factor... 40 0.033 1 16.1% 54:109 128:183 -----------------------------------------------------DEAEALLQDLKPREQEILRLRYLDEMEYNEIAALLQESESNIRQIVSRSLKFLRGQ------------------
388 UniRef50_A1TYG1 RNA polymerase, sigma-24 su... 40 0.033 1 20.6% 50:112 99:158 -------------------------------------------------GFMLDEAMDRLS---PDQRTLLLLHDVDGWRQEDVAEVLGVAVGTVKSRLHRSRATLRKYLQQ---------------
389 UniRef50_C7PH07 RNA polymerase, sigma-24 su... 40 0.034 1 15.0% 48:107 113:173 -----------------------------------------------EEAAILSAQIRqlSKLTSRQREIIWFRFFEGRSFEEIAEIMDMQVRATYKLSARALASLK--------------------
390 UniRef50_B1TBB4 RNA polymerase, sigma 28 su... 40 0.034 1 16.7% 55:114 201:260 ------------------------------------------------------RLADAVRHLPERTRKIIQYHYFHGLAFEQIADILGVSKGRISQLHRAALAELRERLGAVE-------------
391 UniRef50_D0LTI3 RNA polymerase, sigma-24 su... 40 0.035 1 15.5% 56:113 166:223 -------------------------------------------------------LLDALRSLPLQMQELLEFRYQQDLSIREIAEILGIEVSATKSRLRRAKEALRRALGTS--------------
392 UniRef50_D1PVX2 Putative uncharacterized pr... 40 0.035 1 15.4% 46:110 98:163 ---------------------------------------------DDTDgeQMDVIYKTMEKMSPRTRLVVEQCYFENMKYAEVADLLGLSKDGVRKHIIKALAMLRKAF-----------------
393 UniRef50_A3TM98 Putative RNA polymerase ECF... 40 0.036 1 15.1% 55:107 120:172 ------------------------------------------------------DLFARLQRLPARQREVLVLRYYLDLSEAQIAEALGIAPGSVKAHAHRGLAALR--------------------
394 UniRef50_Q9L1Z6 Putative RNA polymerase sig... 40 0.036 1 15.9% 47:115 138:207 ----------------------------------------------DEDTSVLSLAVAQGLDELPdqRQVLVLRFYADLPVRGIAEELGIPEGTVKSRLHTAVRALRARLHEDEV------------
395 UniRef50_Q67P79 RNA polymerase ECF-type sig... 40 0.036 1 15.0% 55:114 105:164 ------------------------------------------------------QLLEALKLLPPEQRATVVLRFFQDLTIPQIAQVMAVPEGTVKSRLHASLAKLRAALASSE-------------
396 UniRef50_B6R5P8 Transcriptional regulator, ... 40 0.036 1 12.5% 64:103 13:52 ---------------------------------------------------------------TRQIYKVLVMHFIEGKSQAEIAKLIGVSHPKVNRMIKQGR------------------------
397 UniRef50_A4C7J3 RNA polymerase sigma factor... 40 0.036 1 13.8% 55:112 122:179 ------------------------------------------------------HVIAAMNTLNVEQRSVIELKFFHHYTLEQIGELQNISTNTVKSRFYAALENLKPHLEA---------------
398 UniRef50_C6Y3L0 RNA polymerase sigma factor... 40 0.037 1 15.2% 65:110 133:178 ----------------------------------------------------------------PAQQRIFRMHYHDDLSTQEIAKILKLSRGTVQNQLTRAVTLLRASL-----------------
399 UniRef50_A7B9G5 Putative uncharacterized pr... 40 0.037 1 15.9% 60:103 1:44 -----------------------------------------------------------MERRDEQSIEAVKLYYQQGLSQAEVATRMGLSRPTVAKLLAHGR------------------------
400 UniRef50_Q6ANY1 Related to RNA polymerase s... 39 0.039 1 30.6% 52:113 173:232 ---------------------------------------------------LIQGCLARLE--NPRQRLILVAKYFEGINVKKLADRFGCSRYFVESEEQKGLGQMQTCLEKS--------------
401 UniRef50_Q474V4 Sigma-70 region 2:Sigma-70 ... 39 0.039 1 14.4% 15:111 119:224 --------------VRNRALDCLRRAAAARVPQTVELDEELGEWLADdqARALNRCLQRLE---PAQRQAIVLAYLRDLSHAELSERLRLPLGTVKSWIRRGLERLRACLE----------------
402 UniRef50_B0P6T9 Putative uncharacterized pr... 39 0.039 1 15.0% 65:104 41:80 ----------------------------------------------------------------KRQRSVVELYFFKGKSRSAIARQLGIHPSTVSRRLAAARR-----------------------
403 UniRef50_UPI00016C5256 RNA polymerase ECF-type sig... 39 0.039 1 18.2% 52:106 150:201 ---------------------------------------------------LVRAAVDRL----PELlqVVLLAYFQGLKYRDVADALGIPVGTVKSRLHAALAKL---------------------
404 UniRef50_D2BBE7 RNA polymerase sigma factor... 39 0.040 1 16.1% 50:111 127:185 -------------------------------------------------GERVQAALARLPLAQRE---VVVLSFLNDLSHREIAEVLEIPVGTVKSRLHHARATLRGCID----------------
405 UniRef50_B9XBI4 RNA polymerase, sigma-24 su... 39 0.040 1 18.3% 52:111 127:183 ---------------------------------------------------ALDEAMSELS---EEAREALLLRYFKNSDFRTIGQCFKISDDTAQKRVSRALERLRQHLT----------------
406 UniRef50_C0VYK8 DeoR family transcriptional... 39 0.040 1 21.6% 53:103 6:56 ----------------------------------------------------VHGTLYIVTIRDNDAHEAASMYYLQGETMETIARHLGVSRSSVSRLLAYAR------------------------
407 UniRef50_C5C1C1 Transcriptional regulator, ... 39 0.041 1 15.6% 60:104 1:45 -----------------------------------------------------------MDARDELMHEVASMYYLQDQTMEGIARRLGVSRSTVSRLIKSARA-----------------------
408 UniRef50_Q2SH89 DNA-directed RNA polymerase... 39 0.042 1 15.7% 41:110 129:195 ----------------------------------------LREVVNSNEKCRIHRCLRSLDVLNR---NAILMAYYYGYSREDIAVHIEKPVNTVKIWLKRGLGRLAQCL-----------------
409 UniRef50_C3QAU5 RNA polymerase ECF-type sig... 39 0.042 1 11.5% 27:113 88:171 --------------------------LENWFNQQLEERKYKDCFDIDALTKVVNRAIEQLPERCREIFSLSRK---EGLSYRQIAERLGISVKTVETQISIALKRIREILSSS--------------
410 UniRef50_UPI00016C38E8 RNA polymerase sigma-H fact... 39 0.042 1 19.7% 52:117 192:254 ---------------------------------------------------VVDKELSRL----PDHYRVVvlCDLEGMTRREAARQLDIPEGSVASRLARARAMLAKRLTQRGVTL----------
411 UniRef50_A6KX62 Putative RNA polymerase ECF... 39 0.042 1 20.8% 58:110 129:181 ---------------------------------------------------------ASISKLPPKCRQAFELSYFKEMTYKEIAEAMHISSRTVEEHVQKATKFLREDL-----------------
412 UniRef50_UPI0001C312F5 RNA polymerase, sigma-24 su... 39 0.043 1 18.1% 24:117 103:189 -----------------------WDPSAAGMDSICEREPAADVV----DRMVVDGMLARLSRA---EAEVVRLHFHMGFSQSQIVAHTGIPLGTVKSRIASALRRLREMLEEERASL----------
413 UniRef50_D2R452 RNA polymerase, sigma-24 su... 39 0.043 1 14.7% 36:110 120:191 -----------------------------------TADQENSRSIDPMDCSLVNRSLEEL----PADYRVVVlyYFEDLSYKEIAEALEIPIGTVMSRLSRAKMHLREKL-----------------
414 UniRef50_D2R1D3 RNA polymerase, sigma-24 su... 39 0.043 1 18.8% 34:113 106:182 ---------------------------------VATSTAVDGPMLQSEQAALVHRAIATLADEFR---TVLVMREIDGFDYEQISQILDLPVGTVRSRLHRARLQLRDQLKQL--------------
415 UniRef50_C6PRA4 RNA polymerase, sigma-24 su... 39 0.043 1 17.2% 47:110 102:162 ----------------------------------------------DEIKRLVNEAIDKLSVPLK---TTIILYYYNELSIKEISKILGCFQGTVKSRLHNARKFLEKEL-----------------
416 UniRef50_UPI0001B58959 hypothetical protein SSPB78... 39 0.043 1 29.4% 58:108 97:147 ---------------------------------------------------------AALAELPERLYDLLVLRYELGVGDAEIADYLGIEQAAVGAQARYARGRVEG-------------------
417 UniRef50_C0VNT9 RNA polymerase sigma factor... 39 0.044 1 19.2% 28:100 96:172 ---------------------------QAYLDGLSEMEYMLDAVISPEEQvaIHQLCKALEAVSEKAQQAFILHYLEGYTHKETAEKLGVSTKMIQKYLA---------------------------
418 UniRef50_C5RQ60 RNA polymerase, sigma-24 su... 39 0.044 1 23.5% 53:103 108:161 ----------------------------------------------------IDEKLDILESIDKLekKVIVLKYFQDLTITEIAEVLNCPTGTIKTYLNKAL------------------------
419 UniRef50_B9YFM7 RNA polymerase sigma factor... 39 0.044 1 13.8% 28:107 205:281 ---------------------------ASCLGELVPDPHYRSFQLAQEDQIRLQQALVQLENRTRE---VLECVFLQDLTQKQVAEHLGISVVTVSRRVKKGLDLLK--------------------
420 UniRef50_B9XS45 RNA polymerase, sigma-24 su... 39 0.044 1 16.7% 52:111 156:212 ---------------------------------------------------KLNAALLKLSEHHRL---VVTLHDVQGLSHEEIAKIMDCNIGTVRSRLFYARQQLQAYLS----------------
421 UniRef50_A6EHD6 Sigma-24 (FecI-like) protei... 39 0.044 1 13.6% 53:118 110:171 ----------------------------------------------------IKKAISNI----PTIYSTAFVRYFEGYKYYEIAEELNIPIGTVKTRIHEARRMLRLQLQTYRVSLN---------
422 UniRef50_A8F871 Transcriptional regulator, ... 39 0.045 1 27.9% 61:103 7:49 ------------------------------------------------------------KKNDSELIRICKMYYIENCTQEQIARTFGVSRSQVSRLLNEAR------------------------
423 UniRef50_C3BA74 Putative uncharacterized pr... 39 0.045 1 14.5% 60:114 127:181 -----------------------------------------------------------IQKLDENYQTVIILYYYHDLSINKIAWQMNIPEGTVKTYLHRARKALKNLLGGSE-------------
424 UniRef50_B2PU08 Putative uncharacterized pr... 39 0.045 1 21.5% 47:111 109:170 ----------------------------------------------EEQLQLLSEQLAKLPENMEQAYLLAQ---FEGMTYQQIATQLKVSPNSIKYYLQVARKVLQKELT----------------
425 UniRef50_Q066Z3 Possible type 3 alternative... 39 0.046 1 18.1% 17:110 56:144 ----------------SYRYKTTWVEFEDEFMTGRYYGLKNIERC--EQAAKINSALQKLHKNDQKIIRLVI---FEGNSLRLAGKNIGVSAMTVQRRLKRALATLRDRL-----------------
426 UniRef50_B5H2R4 RNA polymerase sigma factor... 39 0.046 1 24.6% 50:110 117:174 -------------------------------------------------ALSVADGLARLTDN---QRQALVLRYYGDLSVRDIARLLDIPEGTVKSRLSKASAALRNVL-----------------
427 UniRef50_D2PN97 RNA polymerase, sigma-24 su... 39 0.046 1 13.0% 54:107 103:156 -----------------------------------------------------DQLLRALATLPRRTRAALVLRFFEDLPDAEIAKVMGCSVGTVKSTVSRGLAKLR--------------------
428 UniRef50_C0W634 DeoR family transcriptional... 39 0.046 1 25.0% 73:104 54:85 ------------------------------------------------------------------------MYYAQGETMEVIARHLGVSRSTVSRLLARARA-----------------------
429 UniRef50_C7H5A7 Sigma-70, region 4 subfamil... 39 0.047 1 16.7% 58:111 103:156 ---------------------------------------------------------AALSALSQMEQEIIFLYYFQRLTHREIGRRYGRAGNTTGRRIQMILRRLRAELE----------------
430 UniRef50_UPI0001C37E01 ECF subfamily RNA polymeras... 39 0.047 1 17.7% 56:117 125:186 -------------------------------------------------------IMEKIEEMGPPDSEILIQKYFFDRNSTAIARVMKMNPVTVRSRCSRAVKRLKKILTELDITL----------
431 UniRef50_B0G942 Putative uncharacterized pr... 39 0.047 1 20.0% 54:108 118:172 -----------------------------------------------------DTIFADLYEKNSRWYEAVTVSYTLDKPQKEVADKMGISVDTLYSTLYRAKQWIKK-------------------
432 UniRef50_A3ZXR2 RNA polymerase ECF-type sig... 39 0.047 1 18.5% 4:111 76:178 ---VETWLHRIAVNEALQHLRRNRRHKHSDLDWEPMDKVDSGRQAEQKDALE-----QALANIDPELKSIFLLREVEDYSYHDIAESLHIPEGTVGSRLNRARRDLQQQLQ----------------
433 UniRef50_A4J196 Transposase and inactivated... 39 0.048 1 16.1% 69:99 9:39 --------------------------------------------------------------------NILIMYYREGKSQREIARLLGVDRKTVRRYI----------------------------
434 UniRef50_C4DG86 RNA polymerase sigma factor... 39 0.048 1 12.5% 31:118 81:164 ------------------------------VDELPDRLGPDGSEASDDRLM----VLAALTQLPKRQRTAVVLRYWEDLPIEQVAEIMKCTTGAVKSQSSRGLAALRAIIDGTRSSHD---------
435 UniRef50_C7QDL0 RNA polymerase, sigma-24 su... 39 0.048 1 18.2% 54:108 117:171 -----------------------------------------------------SRFMAALARLSPGQRAVIVLRFYEDLTEAQTAAAMGCTVGTVKSQTAKALARLRR-------------------
436 UniRef50_A0M260 RNA polymerase ECF-type sig... 39 0.048 1 16.4% 52:112 118:178 ---------------------------------------------------LVQKAEEILKCLPEKMQEIFKLKVMHGLSYKEIAEEMEISINTVKTQLKRAKFKIESALLI---------------
437 UniRef50_Q2W687 DNA-directed RNA polymerase... 39 0.049 1 17.6% 35:119 80:168 ----------------------------------PEDFAGLADQCEDAVTALmdCITAHLSALPDRLREVLVLHDMGGAGHAEVAAALGITEGNARVLLHRARAALRERL-GKHCRIDL--------
438 UniRef50_C7Q1Q6 RNA polymerase, sigma-24 su... 39 0.049 1 16.9% 48:118 111:180 -----------------------------------------------EDVTLRDSLLRALDELPHGMRTIVVLRYWEELSVQEVAELRRCSAGTVKSQAARGLARL-RELMTAEARSE---------
439 UniRef50_B2UNI5 RNA polymerase, sigma-24 su... 39 0.049 1 19.7% 51:111 138:195 --------------------------------------------------LKINEALKKLSTKHRE---VVVLHDVKGLNHTEISALLGISEGTLRSRLHYAHKELQGLLA----------------
440 UniRef50_UPI00019736E4 ECF subfamily RNA polymeras... 39 0.051 1 21.4% 55:110 123:175 ------------------------------------------------------EAIGRLDGIYQ---DVLRLYYVHELPSKEIGKILNINHLTVNTRLKRAREKLFKML-----------------
441 UniRef50_A9AUQ5 Transcriptional regulator, ... 39 0.052 1 18.5% 54:107 122:175 -----------------------------------------------------HLALELLAHVSLTQRDHLIMRYFLGWRVQTIAQHLGCSENAVSVSIHRALRILQ--------------------
442 UniRef50_D2Q1G7 RNA polymerase, sigma-24 su... 39 0.053 1 17.8% 66:110 126:170 -----------------------------------------------------------------RQRAAVVLRYYEGLPDAEIAEVLGCTAATVRSQIHRALGSLRATL-----------------
443 UniRef50_B0PHJ8 Putative uncharacterized pr... 39 0.053 1 19.7% 55:115 127:188 ------------------------------------------------------DCLIELIGQMPESYrvLLLKYDNGYSTAEIASMLNLTEENVKKRIQRARKKLEQILDTEGV------------
444 UniRef50_B0NZQ8 Putative uncharacterized pr... 39 0.053 1 17.5% 59:115 125:181 ----------------------------------------------------------NLAALPRRHRDTILFRYVYGLKCKEIADLFRITERSVKNRCKEARELLRQMMEADEL------------
445 UniRef50_UPI0001851483 RNA polymerase ECF-type sig... 39 0.053 1 17.9% 58:113 126:181 ---------------------------------------------------------SALSILNQEQKQIVELFYFKGQSQSTIAKETGLPLGTVKGRIRLALQHIKKHLERE--------------
446 UniRef50_UPI000197B429 hypothetical protein BACCOP... 39 0.054 1 21.3% 56:116 129:189 -------------------------------------------------------LMSILEKEPPQIKQIIKMHFYMEMTYMQISAELHLNKSTMAKRLRTALKRIKAEMTQEGIR-----------
447 UniRef50_C7Q0T3 RNA polymerase, sigma-24 su... 39 0.054 1 20.4% 54:107 128:181 -----------------------------------------------------SALMAALAELPARQRAVVVLRYWEDLPEKEVAAVLGCSTGTVKSQASKALARLR--------------------
448 UniRef50_Q21PM0 Sigma-70 region 4 n=1 Tax=S... 39 0.054 1 13.8% 28:114 87:184 ---------------------------IDWIRRKQTRRKYEQPMPDDESHVELGGTTtaLHSLEPEAQQIIRLFYMEGFSVQEIGSIIDKPEGTVKSRLFAARNKLKQVLEGGH-------------
449 UniRef50_B2A0Y6 RNA polymerase, sigma-24 su... 39 0.054 1 12.7% 54:108 104:159 -----------------------------------------------------HEIYKKILSLTPNNyeIIILYYYGGLSIKEIAVTLNSNPSTIKTTLHRARKKLKR-------------------
450 UniRef50_D1SFQ0 RNA polymerase, sigma-24 su... 39 0.054 1 14.5% 58:112 123:177 ---------------------------------------------------------AALAELPPHQRRAVVLHYLADLSVAQIAAQEDVPEGTVKSWLYRGRTALAAKLTT---------------
451 UniRef50_A3UJ72 RNA polymerase sigma-70 fac... 39 0.054 1 23.6% 58:112 125:179 ---------------------------------------------------------TAMRDLPPEQHAALWLYHIQGLTVAEIAAALDVPTGTIKTRLMHARRKIAAQLQG---------------
452 UniRef50_B0N7Y8 Putative uncharacterized pr... 39 0.055 1 21.4% 69:110 113:154 --------------------------------------------------------------------NVLYLYYYEGYSTNEIASILKENHNTIKSRLIRGRKLLKKKL-----------------
453 UniRef50_D0L5V1 RNA polymerase sigma-70 fac... 39 0.056 1 15.4% 37:114 189:271 ------------------------------------DGRSIRDTLGDDDARliDEFVtvLDQLPDREREIVTLRFFHAMSQSEIAARVGISQMHVSRLLSRTLETLREQLTVDD-------------
454 UniRef50_A6G0C2 DNA-directed RNA polymerase... 39 0.057 1 13.1% 51:111 118:175 --------------------------------------------------RLLHEALRAI----PLEFQvlELHYWQELTTSQIAAALDVPAATVKSRLRRGRGHLERVLT----------------
455 UniRef50_B5GZ85 RNA polymerase n=1 Tax=Stre... 39 0.058 1 15.5% 54:111 142:199 -----------------------------------------------------HVVVDALRDLAPYQQEVLLHVYYLGRSVRQTALALGVPPGTVKSRTHYAIRALRAGLT----------------
456 UniRef50_C7QCU5 RNA polymerase, sigma-24 su... 39 0.059 1 22.2% 58:111 122:175 ---------------------------------------------------------AALRALPARQRAVVLLRYYLDMSEAETAVMLGCSQGTVKSQSSKALAALRGRLA----------------
457 UniRef50_A4FHE1 RNA polymerase sigma factor... 39 0.059 1 19.6% 60:110 205:255 -----------------------------------------------------------LAELPERERRILVMRFFRGMTQTEIAEQVGVSQMHVSRLLTRTLSWLRERL-----------------
458 UniRef50_A4FQI7 RNA polymerase ECF sigma fa... 39 0.060 1 12.8% 35:112 89:166 ----------------------------------DPGDPLADPAVAGQRAQARDLVLSALAEVPPRQRAVLVLRYWEDLPTAEVAAALRCSEGTVKSQASRGLRNLRAAIAR---------------
459 UniRef50_A5N6W1 RpoE n=4 Tax=Clostridium Re... 39 0.060 1 14.8% 54:107 109:162 -----------------------------------------------------EDILKKVMDLPKKYKEVILLYYYQELSTSEISKILKIPEGTVRSRLYRARGILK--------------------
460 UniRef50_C0EB29 Putative uncharacterized pr... 39 0.061 1 13.0% 34:102 34:99 ---------------------------------SPKSGDSNRSQIN-QASRAVAGIID--SELTPRQRQIIQLYYNQRLNTTQIAELLKINKSTVSRTLARA-------------------------
461 UniRef50_B0MUR5 Putative uncharacterized pr... 39 0.061 1 18.9% 65:117 141:193 ----------------------------------------------------------------EEQREVVMMRYYSGMSFKEIAEQTGVSINTALGRMRYALINLRRMIREKELIL----------
462 UniRef50_A8LDY6 RNA polymerase, sigma-24 su... 39 0.062 1 20.8% 58:110 174:226 ---------------------------------------------------------AALMTLPARKRACVVLRYAFDLSEADTARTLGISVGTVKSQTSKAVAELERVL-----------------
463 UniRef50_B9L2W8 RNA polymerase, sigma-24 su... 39 0.062 1 17.2% 33:96 95:164 --------------------------------QLVSLDAVVLPSIADDTAREiaDLLKALDALPKEQREVVELAYFEGLTHHEIATRLRIPLGTVK-------------------------------
464 UniRef50_A9WDI9 RNA polymerase sigma factor... 39 0.062 1 12.1% 55:120 123:189 ------------------------------------------------------EVVQRALQRLPVTYrvTVLRYWYDLSYEEIGQVLGLTEATVKTRLHRARKMLQEALAAEEEVWNIE-------
465 UniRef50_B9L3X4 RNA polymerase, sigma-24 su... 39 0.063 1 12.3% 9:114 139:235 --------RCWFDWLRA--QQLEYRAFGRVLREACPRAAEDWSA----DRLLVEQALAKLRDRDRE---ILYLRWEAELGFDEIADLLGISPTAAQRRAHRALVRLRQALAQRD-------------
466 UniRef50_Q3SQV6 IstB-like ATP-binding prote... 39 0.063 1 19.4% 68:103 8:43 -------------------------------------------------------------------ARIRREHFIKGKTIRAIARDLKVSRNTVRKVLRSGE------------------------
467 UniRef50_Q2NDN6 RNA polymerase sigma factor... 39 0.063 1 15.2% 19:110 92:181 ------------------RDGVVRSEADDTLPDVADDAKPQDEWLCdeDAEALQRCLEGLEKDHRRS---IRLAFFEGLSHSELARRIDAPLGTVKSWIRRGLAGLKGCL-----------------
468 UniRef50_C7WYU9 RNA polymerase n=2 Tax=Ente... 39 0.063 1 17.8% 58:102 71:115 ---------------------------------------------------------AALSRLTDRQRRVIELHFWQGYQYKEIAVILGCDPSAVTRLLQRA-------------------------
469 UniRef50_C4KZA8 RNA polymerase, sigma-24 su... 38 0.064 1 14.1% 58:121 123:186 ---------------------------------------------------------TAMATLPAEQQQVVRLMYFQGLSQQKIADACGIPLGTVKGRIRLALRQLRKQLSHEFIGKEVEQ------
470 UniRef50_B3R413 RNA polymerase sigma-70 fac... 38 0.064 1 14.3% 50:112 171:230 -------------------------------------------------AQHVHRALLQLPVAQRE---VVVLRFFSNMSVEEIAAMLGEKFETVKSRLRYAFARLRADLAG---------------
471 UniRef50_B7UVZ8 Putative RNA polymerase sig... 38 0.064 1 11.3% 48:118 120:190 -----------------------------------------------EQLERLDQVDKALASLSRQQQQLFELRFIEELPYADIASQLGIAPPLVRKRVQLLRSRLSADFFAGDVSQD---------
472 UniRef50_C6J9Q6 RNA polymerase n=6 Tax=Bact... 38 0.064 1 21.5% 52:116 145:206 ---------------------------------------------------ILHLCMDELNSDYREA---LYLTYFEGMSYQQAAEVMGKSVKQITNMVYRGKERLRGLLQREGIT-----------
473 UniRef50_C8WJQ5 RNA polymerase, sigma-24 su... 38 0.065 1 23.2% 48:103 126:178 -----------------------------------------------DEALDVRDAIASLSADDRL---VLVLFYVNDFPVRQISQIMNVSEGAVRTRLSRAR------------------------
474 UniRef50_C6XXN2 RNA polymerase sigma factor... 38 0.065 1 13.2% 55:107 127:179 ------------------------------------------------------QLLDALNQISPRQKEILYLRYFEELDYNQIAEMMNISVKGAYKLSARALEALR--------------------
475 UniRef50_B1HXE6 RNA polymerase sigma factor... 38 0.065 1 17.9% 47:113 107:176 ----------------------------------------------EDDVLLfdRTLHniQSLDEKYRYPIVLYYFHELKYEEIAEVLNISLSTVKVRLLRAKEKLKAALMQE--------------
476 UniRef50_Q04V56 RNA polymerase sigma subuni... 38 0.066 1 12.6% 32:118 86:178 -------------------------------KREVENSHKVLEFIseEDKHQLDLLNASLENLPHLEKNIIILRFLRNYTIKETAEKLGISARTVNRKTYVSLIFLRKKLQNSNFDFE---------
477 UniRef50_D1C190 RNA polymerase, sigma 28 su... 38 0.066 1 13.3% 52:111 194:253 ---------------------------------------------------LVHRLAAALERLPERDRLIVTLYYYEELTLREISEVLGITESRVSQLLSRARLQLRALLH----------------
478 UniRef50_Q2YZY9 RNA polymerase sigma-E fact... 38 0.066 1 20.8% 65:112 190:237 ----------------------------------------------------------------PRQRSIFSLRYREHLKIRQIAGRLDCSESNIRAQLFKTKARLRRMFAA---------------
479 UniRef50_D0LXD4 RNA polymerase, sigma-24 su... 38 0.066 1 22.8% 54:110 148:204 -----------------------------------------------------DEVTRALGKLRPDYREVVELADVRGLGYREIADELSLPLGTVMSRLFRARRSLEGEL-----------------
480 UniRef50_Q0KCN4 DNA-directed RNA polymerase... 38 0.068 1 13.3% 54:113 139:198 -----------------------------------------------------HHVQRALLQLPVAQREVVVLRFFSDMSVEEIAQMLGEKFETVKSRLRYAFARLRANLAGS--------------
481 UniRef50_B5GMK1 RNA polymerase ECF-subfamil... 38 0.068 1 16.7% 48:107 110:169 -----------------------------------------------DDARRLDAVHRAVRGLRRQEREVLALCVWSGLDYQQTADALGVPVGTVRSRLSRARVRLR--------------------
482 UniRef50_D1CE12 RNA polymerase, sigma-24 su... 38 0.069 1 19.6% 58:113 149:204 ---------------------------------------------------------GALALIPSEQKEVIELAYYGGMTISQIAKLTGASTGTVKTRMRLGMMKLRQILTSS--------------
483 UniRef50_C7HA68 RNA polymerase ECF-type sig... 38 0.069 1 14.5% 61:122 125:179 ------------------------------------------------------------AQLEPEQRELVLLRFAQQLKLREIAEITGLPLRTVQSRLRAA-------LKTLKMQLEKEDW-----
484 UniRef50_Q7UJX5 Probable RNA-polymerase sig... 38 0.070 1 15.8% 51:107 182:235 --------------------------------------------------LQLAEALESLPEHYRE---VIVLRHVEGMSFADVAKSMDKSVDSVEKLWVRGLAKLR--------------------
485 UniRef50_D2S8S5 RNA polymerase, sigma-24 su... 38 0.070 1 10.3% 15:111 66:156 --------------VNAHTSWRRRLSTTEQVVESVPDRAAAPAEDGDEQLR------AALRELPVRMRTAVVLRYFEDLSEQQTAAAMGCSPSTVNTQTARGLARLRAALA----------------
486 UniRef50_D2NU89 Transcriptional regulator n... 38 0.070 1 17.8% 59:103 35:79 ----------------------------------------------------------QMNERANHTYEAAQLYYIHNMTMDAIAARLGVSRATVSRLLKSAR------------------------
487 UniRef50_A7AAK6 Putative uncharacterized pr... 38 0.070 1 16.4% 60:114 130:184 -----------------------------------------------------------LEHLPAQRREVFILTYIKGLTAKEVAEQTQMPQRTVESHLYLALRFLKGHMSRND-------------
488 UniRef50_C1F885 RNA polymerase sigma-70 fac... 38 0.071 1 12.7% 60:114 178:232 -----------------------------------------------------------LVKISPELREAVILRDLQDLDYKEIAQILRVPEGTVKSRISRGRAELARVLERSK-------------
489 UniRef50_Q1D5D4 RNA polymerase sigma-70 fac... 38 0.072 1 21.8% 31:117 136:221 ------------------------------MKEVLPSGEASQEeiAREERQSLEEAMATLSVEDRE---VLALYYVQKRTTKEIAQIMGCAPGTIMARLFRAREKLRKKMTAEEAPR----------
490 UniRef50_B2HV64 DNA-directed RNA polymerase... 38 0.072 1 21.9% 28:100 85:161 ---------------------------QAYLDGLSQMEYMLDAVASPEDQMQIIQAINQLCKALEGVcqAFILHYLEGYTHKEIAERLNVSTKMIQKYLA---------------------------
491 UniRef50_A9DUP1 Sigma-24 (FecI-like) protei... 38 0.072 1 20.5% 67:110 134:177 ------------------------------------------------------------------QRQIVHLFYVYEHSLKDIAQILNISVGTAKSRLYHAREQLKKQL-----------------
492 UniRef50_A3WLE9 RNA polymerase sigma factor... 38 0.075 1 12.5% 43:114 113:182 ------------------------------------------PELSDQQQEA--ALVKAIRALPLAQRMVVELKFFQHLTTRAIATQLQESENTIKSRLYSGVEKLKRELEVIN-------------
493 UniRef50_A8FB47 DNA-directed RNA polymerase... 38 0.075 1 23.1% 48:112 120:181 -----------------------------------------------EEKQIIREAVSTLSK---EQQTIIEDVYFKGMTQKSIAEKLGIPIGTVKGRVRLSLKHLRTRLSR---------------
494 UniRef50_UPI00016C380C RNA polymerase sigma-H fact... 38 0.076 1 20.0% 31:115 114:195 ------------------------------FPTPPTEGDALAEVSSRELLAILDEELAALPEENR---GPLILCCMEGMSGDEAARHLGCSESTLKRRLRHARELLQERLSRRGI------------
495 UniRef50_Q0C430 RNA polymerase sigma-70 fac... 38 0.076 1 13.8% 35:114 125:202 ----------------------------------CPASPNPEKQLMDAERLAIAEAVVSGMSARRQAA--LRLHRYEGLSYEEIARRLSISSTAVKKHVARAVAEIAARLAEAE-------------
496 UniRef50_C7Q3Q5 RNA polymerase, sigma-24 su... 38 0.076 1 13.8% 56:113 102:159 -------------------------------------------------------LMEALKQLSPRQRAVVALRFWDDMSVEATAEALGMKANTVKSDTARALAKLKGLLDSS--------------
497 UniRef50_C4RG63 RNA polymerase sigma factor... 38 0.076 1 14.1% 47:110 121:184 ----------------------------------------------DADVSAVLDVREALRRLPHRRRACVVLRYAFDLSERETARALGISVGTVKSQTSRGVAQLTTLL-----------------
498 UniRef50_Q1IUA0 Sigma-24, ECF subfamily n=1... 38 0.077 1 21.0% 52:113 110:171 ---------------------------------------------------IVEKVRAALAEMFPEQRRCMEMAYFEGLTHSEIAAKTGEPLGTIKTRIRSALIQLRKKLGGA--------------
499 UniRef50_C1A5Q9 RNA polymerase ECF-type sig... 38 0.077 1 14.8% 9:116 76:186 --------QAFGAwaALDIARRRKVRDADELPETLSSPHRD-PAESDELRARLTRALDTLG---ERQRAVIVLHDVEGYKHAEIGTLLGIPEGTARSDLHHARAHLRRQLSNLRSE-----------
500 UniRef50_Q7MXL2 RNA polymerase sigma-70 fac... 38 0.078 1 15.4% 49:113 128:192 ------------------------------------------------ELATIEELEQYLSVLPEVQQEVVRMRYWEDMSFREIADATGVSINTALGRMRYALINLRKMMGMS--------------
501 UniRef50_B1YM24 RNA polymerase, sigma-24 su... 38 0.078 1 14.6% 19:114 88:180 ------------------RREKRQPTIEVEERDGGYDEPVERTVMQRETATEVRDAVNELK---PDQQELIELVYFKGLTQQQISDQLNLPLGTVKTRIRSAIQALRKLLDGRE-------------
502 UniRef50_A7V7Z1 Putative uncharacterized pr... 38 0.078 1 15.7% 60:110 132:182 -----------------------------------------------------------IRQLPPRRAEALNLFYFEGKSQKDIANQMHVSLRTVQTHLAQAIAELRKSL-----------------
503 UniRef50_D2QYF2 RNA polymerase, sigma-24 su... 38 0.078 1 19.4% 48:114 141:204 -----------------------------------------------EDALHLSEALANLPADYRE---VIVLRNLEGLPFKMVAERMERSEDSVEKLWMRALVKLRAHLGAAR-------------
504 UniRef50_C0Z5Y5 RNA polymerase ECF-type sig... 38 0.080 1 10.2% 52:110 121:179 ---------------------------------------------------EMHSIQRALQKLKPDQRIIVILRYIKEYSVKETAEILGIPETKVRVDCHRGLKALQKIL-----------------
505 UniRef50_C4RHF9 RNA polymerase ECF-subfamil... 38 0.080 1 19.6% 55:110 176:231 ------------------------------------------------------RVLALLATLPNSMRAAVVLRYVEGLSVTETADAMRCSEGNVKSQSARGLERLRALL-----------------
506 UniRef50_A4AH57 Putative RNA polymerase sig... 38 0.080 1 17.5% 58:114 114:170 ---------------------------------------------------------SQLMKLRPRERACVVLRYYEDLKVDDIAQTLQISSGAVKRYLSDALARMAVGLDRAE-------------
507 UniRef50_A6NX52 Putative uncharacterized pr... 38 0.080 1 23.2% 55:110 106:158 ------------------------------------------------------SAVGRL----PEKYraVYLHYVEGYTAEEIAALLGCPRGTVLSRLMRARKLLRDLL-----------------
508 UniRef50_C7NHN4 RNA polymerase sigma factor... 38 0.081 1 17.3% 52:103 193:247 ---------------------------------------------------AVDEWVshIQALDPRDRCVLLRRYLEDETQASIARALGISQAQVSRRLKRAL------------------------
509 UniRef50_A0AEU0 Complete genome n=1 Tax=Lis... 38 0.081 1 20.0% 55:104 102:151 ------------------------------------------------------EIINTMKNLNENHQKLLMMKYDIGMSYQEIAEYLDTTPSNVKTYLSRARS-----------------------
510 UniRef50_A6GDL7 Putative uncharacterized pr... 38 0.081 1 16.9% 52:122 112:177 ---------------------------------------------------ALDAAVAELRSP----FRAVVTLHLAGHDNREIAGRLGLNDNTVRSRLSRGLASLRRAL-GSEQRRRVDPL-----
511 UniRef50_A9ESI6 ECF-family RNA polymerase s... 38 0.082 1 20.9% 26:111 169:247 -------------------------PLVARIDGADPLNVVRRREI----AGRIQAALDAL---PPYHRGVILMREVEGMSYEEMAQAMGVSKGTIMSRLFHARQKLQRALA----------------
512 UniRef50_D2PVB3 RNA polymerase, sigma-24 su... 38 0.082 1 14.5% 48:116 123:191 -----------------------------------------------DDERAMSDIRRVLDRIPAKQREVVELVVWADCSMAEAARALGVPEGTVKSRLARARSSLAGLLDVDTLE-----------
513 UniRef50_A4F9Q1 RNA polymerase ECF sigma fa... 38 0.082 1 15.7% 60:110 107:157 -----------------------------------------------------------LAALPPGQRAAVVLRYWEDQSVEATAQLLGCSTGTVKSQTARGLAALRKLL-----------------
514 UniRef50_Q6XR77 RNA polymerase sigma factor... 38 0.082 1 18.4% 63:111 153:201 --------------------------------------------------------------LEPEQQAILRDHYVEGFSVKQLCEKFTVKHSTMTMRLYRCREWLRDCIT----------------
515 UniRef50_B3DQS2 DNA-directed RNA polymerase... 38 0.083 1 22.2% 49:111 127:189 ------------------------------------------------DAFAPEEIMAALAKLSPERRQVFIDAAIDGKSYQQVADEQGVKIGTVMSRLNRARTQLKRELA----------------
516 UniRef50_Q3DIT8 RNA polymerase sigma factor... 38 0.085 1 23.3% 52:111 101:157 ---------------------------------------------------ELHEAILHLKKDYQTLIDL---YYFNDFSIKEISEITGQSQSTIKIRLMRARREVKKYLE----------------
517 UniRef50_A6TX43 RNA polymerase, sigma-24 su... 38 0.085 1 18.2% 60:103 128:171 -----------------------------------------------------------LEQLDPDAKEIITLRYYHHLTYEDVGKALSLKQGTVKSRLRRAK------------------------
518 UniRef50_C9YZT0 Putative membrane-associate... 38 0.085 1 15.0% 15:114 125:220 --------------MRIRHLQVARRHVEAPAAEEPVASAESTALLHDDQRVLID----ALQHLPARQREALVLRHWLGLKESEIAAAMGISCGSVKTHTARGLAALTQAMEARR-------------
519 UniRef50_A9AVG8 RNA polymerase, sigma-24 su... 38 0.086 1 18.2% 52:95 116:159 ---------------------------------------------------VIAALLPHLRQLSVEEHKLIALKYGAGLTNRDIATVLDLTESTV--------------------------------
520 UniRef50_B1ZXG6 RNA polymerase, sigma-24 su... 38 0.087 1 16.7% 52:111 160:216 ---------------------------------------------------LVDLCMEKL---DARHREILTLRNVLNRSYEEIATTLGINVGTVKSRIARARENLRTLLA----------------
521 UniRef50_A8ETG9 Sigma factor, ECF family n=... 38 0.087 1 23.3% 60:102 104:146 -----------------------------------------------------------IKSLPPQQKKAFVFYYYKGYTRKEIAQILDISTNAVEKNISRA-------------------------
522 UniRef50_A6G3U7 RNA polymerase sigma-70 fac... 38 0.087 1 16.7% 54:113 115:174 -----------------------------------------------------HQLLLALRELPVEQQMLIELHYWEGIALEELATIFEVAPATVRSRLFRARKDLRRRMTRL--------------
523 UniRef50_Q637N4 RNA polymerase ECF-type sig... 38 0.087 1 19.8% 23:113 88:177 ----------------------ECNNIIRTYKKVIVTEENDYNMSACDQYEDIDLC-NAIQSLHEELRAVTVLYYYEDMNQESIAKLLEVPKGTVKSRLARAREQLQKRLKME--------------
524 UniRef50_Q2JA53 Sigma-24 n=3 Tax=Actinomyce... 38 0.087 1 12.5% 56:111 140:195 -------------------------------------------------------VVVALQRLSPRQREALVLRYWLDLKESEIAAVMGISCGAVKSHVARGMTALSRAME----------------
525 UniRef50_A3TIU4 Putative sigma factor n=1 T... 38 0.087 1 21.0% 53:114 128:186 ----------------------------------------------------VHDAVAGLDADDRE---IVTLTYWDGLTSAQVAAATGLSASAVRKRLERARQRLAQHLVSRD-------------
526 UniRef50_A6NPM0 Putative uncharacterized pr... 38 0.089 1 22.4% 63:111 105:153 --------------------------------------------------------------LTPRERQILLLYYEEELSHEEIARKLGISELNSRTRLFRARGRCRDLLE----------------
527 UniRef50_Q5WAM8 DNA-directed RNA polymerase... 38 0.090 1 10.5% 58:114 116:172 ---------------------------------------------------------AALLDLDQKYQSAIILHYYHDLPIKEVAEIMKKPQSTIKSYLLRGRKRMKAYFERSE-------------
528 UniRef50_Q73CE7 RNA polymerase sigma-70 fac... 38 0.090 1 18.3% 48:107 106:162 -----------------------------------------------EQKLEFDNLLSYLSVEYRL---VIVLYYVNKFKTKEIAEILNEKEGTIKSRLHRARQQLK--------------------
529 UniRef50_C5CGY4 Transcriptional regulator, ... 38 0.090 1 22.0% 63:103 3:43 --------------------------------------------------------------LNELAYRVSRLYYLDGLTQQQIANRLGISRPKVSRLLTYAR------------------------
530 UniRef50_UPI0001B50E6C ECF subfamily RNA polymeras... 38 0.091 1 13.3% 30:112 103:195 -----------------------------RLRRLVIARRYAEPRLCeqQALLNNdvVKALRRLPRRQFEALILKHWMNLKESEIAETMGISVGAVKSHTSRGITRLSQMLET---------------
531 UniRef50_A6GCB5 RNA polymerase, sigma-24 su... 38 0.092 1 22.9% 69:116 120:164 --------------------------------------------------------------------EVLELRYFEERSAAEIARELDLPPGTVR--WRCSEG-LKRMRQALDAR-----------
532 UniRef50_UPI00016C5798 peptidase C14, caspase cata... 38 0.093 1 23.5% 52:102 137:184 ---------------------------------------------------MLDAEIDRLSEPYRRAF---VLCYLEGLSNADAARELGCPVGTIESRLTAA-------------------------
533 UniRef50_Q1IQM4 Sigma-24, ECF subfamily n=1... 38 0.093 1 22.4% 48:114 117:180 -----------------------------------------------DDARAIHDALDKLE---PSHREVLTLFFLEGFTVSETAGIVGCAEGTVKSRLHYAKKALRKIMDGEN-------------
534 UniRef50_C0Z6H7 RNA polymerase sigma factor... 38 0.093 1 15.6% 55:118 118:181 ------------------------------------------------------DLTSALQQINEIEREIIMLRFFGECTFAEIAQIMQMGESAVKNRMYRALEKVKGNLRGSEDSYE---------
535 UniRef50_UPI000174489D RNA polymerase sigma factor... 38 0.094 1 13.2% 58:110 151:203 ---------------------------------------------------------SAVLELTPEQREAIQMAYFGGLTQSEIAERLNEPLGTVKARIRRGVQRLEQVI-----------------
536 UniRef50_D2R2W6 RNA polymerase, sigma-24 su... 38 0.094 1 12.5% 32:111 105:182 -------------------------------MQLTSREQPPDVILENDERMALLR--DALRALRPEEQEIFLLRQNGNLTYEEIAKELNIPPGTVKTRMRLALNHLRQVLA----------------
537 UniRef50_D1X4L6 RNA polymerase, sigma-24 su... 38 0.095 1 13.1% 48:108 98:155 -----------------------------------------------DTGLVVRQALARLTA---RQRAVLVLRYWEDLSVEATAEALGMRTNTVKSHTARGLAALRA-------------------
538 UniRef50_B8HNZ8 RNA polymerase, sigma-24 su... 38 0.096 1 15.8% 58:114 133:189 ---------------------------------------------------------AALQTLPEEQRLVLELAYYQGLSHSQIASQTGLSLGTVKTRIRLGLSKLKSAFSSKE-------------
539 UniRef50_A9VWD6 RNA polymerase sigma factor... 38 0.096 1 20.8% 49:125 190:266 ------------------------------------------------DRLDVEDLQTALAKLPPDQREALVLVGAEGVSYEEAATIMGCKVGTVKSRVSRARGRLAELLGYDEEDLSSDRLIQS--
540 UniRef50_A6LDP1 RNA polymerase ECF-type sig... 38 0.096 1 12.1% 53:110 89:143 ----------------------------------------------------VDSLIQQMPEGRQRIYKLSRQ---SHLSNREIADQLQISENTVESQLTKAISFLRKRL-----------------
541 UniRef50_A1TML2 Putative uncharacterized pr... 38 0.096 1 20.4% 4:111 47:161 ---VQQRLENWGMWASRGGHGSGGYSSQSVLAGWVEADAWARNRcsEAEALETDRAIASFKDTRPAIAKALILVYVYDFGVVEAAYREKVAQSTMHARLGQADHAIAMWLE----------------
542 UniRef50_Q0BU49 RNA polymerase ECF-type sig... 38 0.097 1 23.9% 48:114 118:184 -----------------------------------------------EDRLALKELGKAMERLPVDQREALVMVVIHGMSYEDLAEATGCAVGTAKSRVFRARRQLEAWLMGED-------------
543 UniRef50_C9YMG7 Putative uncharacterized pr... 38 0.097 1 14.6% 25:113 50:139 ------------------------SELAQLFTTDEYESDYFRFQVSGFDVLVKNELLaaLNALPERKRDIILLSYFLDMSDAEIGELLNVVRTTVFRHRKSALAKIKQYLEGK--------------
544 UniRef50_C8WMH9 RNA polymerase, sigma-24 su... 38 0.097 1 19.6% 71:116 126:171 ----------------------------------------------------------------------VHLHYVEGYTTDEIARMLHSQPATVRTWLSRARARVKDLLTRESER-----------
545 UniRef50_D2EVL7 Predicted protein n=1 Tax=B... 38 0.097 1 15.3% 49:107 101:160 ------------------------------------------------EAMRQDILISKMLDKLPAMTriLEECYLARKTYQQVADEMNISPNTVKKHISKSLKMLK--------------------
546 UniRef50_C4DIR0 RNA polymerase sigma factor... 38 0.097 1 16.7% 56:121 120:185 -------------------------------------------------------VVEALRKLSPAHREVLMECFYGGRSVNEAAEKLAIPAGTVKSRLHYALRALKLALEEAGVVRREER------
547 UniRef50_C6D1T7 Putative uncharacterized pr... 38 0.098 1 16.4% 48:102 144:198 -----------------------------------------------EELGQIDTILMALECYKPNLSKLLRLRYVEGESVEETICLLGIVERTYKRWRKQA-------------------------
548 UniRef50_C7PJP1 RNA polymerase, sigma-24 su... 38 0.099 1 21.4% 57:112 125:181 --------------------------------------------------------LIILIKELPPSYQVVFNMYvdGFSHQEIADKLNISIGTSKSNLAKARAYLQKKLNT---------------
549 UniRef50_A6EB75 RNA polymerase ECF-type sig... 38 0.099 1 15.7% 28:110 104:186 ---------------------------AAGDQHIIVGSYESILIASQEDEQLKKRLQHAMESLSPRQKEIVKMRYFECLSFKEIAEKTLLTERTVYNTLHNAVNVLRDVL-----------------
550 UniRef50_D1P7A8 Sigma-70 region 2:Sigma-70 ... 38 0.100 1 11.7% 53:112 120:176 ----------------------------------------------------LDRCFLALTTEKQQA---IKLAYIHGYSHEEIVKRLAHPLGTIKSWIRRGLKELKQCISA---------------
551 UniRef50_C7DD91 RNA polymerase sigma factor... 38 0.100 1 18.5% 54:107 183:236 -----------------------------------------------------DQLSAALAKLPAKQRELIERAYFGDLSHSEIAEETGLPLGTIKSRIRLALERLR--------------------
consensus/100% ...............................................................................................................................
consensus/90% ........................................................h.........hh.hhhh.tht.tphut.hths.tthtt.h..u...h............
consensus/80% ........................................l.....p..thl.hhahtshs.tplAp.hths.sslpp.hthuht.lt.........
consensus/70% .....................thhttLtth..c.tpllhltahtshohpclAphhshs.solcpphppuhthLpt.h....
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