Phyre 2 alignment of P0ADV1 with c3ew5B_

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Job Description | P0ADV1
Confidence | 2.05% | Date | Thu Jan 5 11:21:54 GMT 2012
Rank | 46 | Aligned Residues | 24
% Identity | 29% | Template | c3ew5B_
PDB info | PDB header:rna binding protein | Chain: B: PDB Molecule:macro domain of non-structural protein 3; | PDBTitle: structure of the tetragonal crystal form of x (adrp) domain2 from fcov
Resolution | 3.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | N | V | I | V | T | Q | G | T | . | . | . | . | . | I | K | I | N | A | D | K | V | V | V | T | R | P | G | G
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | K | V | S | F | Y | Q | G | D | L | D | V | L | I | N | F | L | E | P | D | V | L | V | N | A | A | N | G | D
Template Known Secondary structure |  | T | T |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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