Phyre 2 alignment of P0ADV1 with c1wcuA_

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Job Description | P0ADV1
Confidence | 1.74% | Date | Thu Jan 5 11:21:54 GMT 2012
Rank | 63 | Aligned Residues | 31
% Identity | 32% | Template | c1wcuA_
PDB info | PDB header:carbohydrate binding | Chain: A: PDB Molecule:non-catalytic protein 1; | PDBTitle: cbm29_1, a family 29 carbohydrate binding module from2 piromyces equi
Resolution | 1.5 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 124 | . | . | . | . | . | 130 | . | . | . | . | . | . |  |  | . | . | . | 140 | . | . | . | . | . | . |  |  |  | . | . | . | 150 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | T | G | N | A | Y | L | Q | Q | V | D | S | N | I | . | . | K | G | D | K | I | T | Y | L | V | K | . | . | . | E | Q | K | M | Q | A | F | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | G | A | I | S | L | K | N | L | N | S | N | Y | Y | G | K | G | G | C | I | Y | L | Q | V | K | T | E | T | E | G | L | V | K | V | Q | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | S | S | S | S |  | S |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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