Phyre 2 alignment of Q1PI54 with c2vl6C_

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Job Description | Q1PI54
Confidence | 1.52% | Date | Thu Jan 5 12:33:28 GMT 2012
Rank | 84 | Aligned Residues | 26
% Identity | 23% | Template | c2vl6C_
PDB info | PDB header:dna binding protein | Chain: C: PDB Molecule:minichromosome maintenance protein mcm; | PDBTitle: structural analysis of the sulfolobus solfataricus mcm2 protein n-terminal domain
Resolution | 2.8 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | I | D | R | T | E | A | F | N | L | F | I | K | K | F | Q | S | V | S | L | L | E | E | Y | L | R | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | D | Y | R | D | V | F | I | E | F | L | T | T | F | K | G | N | N | N | Q | N | K | Y | I | E | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |  | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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