17/01/2012 03:09:33 : INFO  : Run start: Tue Jan 17 03:09:33 GMT 2012
17/01/2012 03:09:33 : INFO  : Initialised job
17/01/2012 03:09:33 : INFO  : Renaming log file 'phyre2_20120117_030933.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/7e0b62bdb8f5f2e7/phyre_20120117_030933.log'
17/01/2012 03:09:34 : INFO  : Initialised job:
Sequence
>batch____
LLISFILPQKWTSAAVVTPPEPVQWQELEKSFTKLRVLDLDIKIDRTEAFNLFIKKFQSV
SLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYTSWTL
SFTAPTSEEAQTVLSGYIDYISTL

17/01/2012 03:09:34 : INFO  : Checked sequence
17/01/2012 03:09:34 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 03:09:34 : INFO  : PSI-BLAST 3 iterations
17/01/2012 03:10:26 : INFO  : PSI-BLAST 5 iterations
17/01/2012 03:11:15 : INFO  : Finished PSI-BLAST
17/01/2012 03:11:15 : INFO  : Running Buildali to generate a3m file
17/01/2012 03:12:44 : INFO  : Converting to HMM
17/01/2012 03:12:44 : INFO  : Calibrating HMM
17/01/2012 03:12:50 : INFO  : Searching HMM database
17/01/2012 03:15:53 : INFO  : Finished buildali
17/01/2012 03:15:53 : INFO  : Predicting secondary structure
17/01/2012 03:15:54 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 03:15:54 : INFO  : Predicting Disordered regions
17/01/2012 03:15:54 : INFO  : Predicted Disorder (Disopred)
17/01/2012 03:15:54 : INFO  : Running memsat_svm check
17/01/2012 03:21:01 : INFO  : Globular protein
17/01/2012 03:21:01 : INFO  : Predicted Transmembrane (memsat_svm) ID '7e0b62bdb8f5f2e7'
17/01/2012 03:21:01 : INFO  : Initialising fold library search
17/01/2012 03:21:01 : INFO  : Initialised search input
17/01/2012 03:21:01 : INFO  : Building Ensemble models
17/01/2012 03:21:01 : INFO  : Building hh.d3b8ma1.model.1.pdb
17/01/2012 03:21:02 : INFO  : Building d3b8ma1.1.pdb
17/01/2012 03:21:02 : INFO  : Building d3b8oa1.2.pdb
17/01/2012 03:21:03 : INFO  : Building d3b8pa1.3.pdb
17/01/2012 03:21:03 : INFO  : Building d1p5dx4.4.pdb
17/01/2012 03:21:03 : INFO  : Building d1mixa2.5.pdb
17/01/2012 03:21:04 : INFO  : Building d1mjia_.6.pdb
17/01/2012 03:21:04 : INFO  : Building c3bboH_.7.pdb
17/01/2012 03:21:05 : INFO  : Building d2zjrd1.8.pdb
17/01/2012 03:21:05 : INFO  : Building c1mk7B_.9.pdb
17/01/2012 03:21:06 : INFO  : Building d1iq4a_.10.pdb
17/01/2012 03:21:07 : INFO  : Building c2k9iB_.11.pdb
17/01/2012 03:21:08 : INFO  : Building c2jvfA_.12.pdb
17/01/2012 03:21:08 : INFO  : Building c3g9wA_.13.pdb
17/01/2012 03:21:09 : INFO  : Building d1eika_.14.pdb
17/01/2012 03:21:10 : INFO  : Building d1dzfa2.15.pdb
17/01/2012 03:21:10 : INFO  : Building c2pmzV_.16.pdb
17/01/2012 03:21:12 : INFO  : Building d1hmja_.17.pdb
17/01/2012 03:21:12 : INFO  : Building d2a5yb2.18.pdb
17/01/2012 03:21:12 : INFO  : Building c3n7nE_.19.pdb
17/01/2012 03:21:13 : INFO  : Building d1uuja_.20.pdb
17/01/2012 03:21:15 : INFO  : Finished HH model building
17/01/2012 03:21:15 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 03:21:18 : INFO  : html domain output complete ID '7e0b62bdb8f5f2e7'
17/01/2012 03:24:30 : INFO  : Run end  : Tue Jan 17 03:24:30 GMT 2012
