Phyre 2 alignment of Q1PI54 with c2x5hD_

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Job Description | Q1PI54
Confidence | 4.23% | Date | Thu Jan 5 12:33:28 GMT 2012
Rank | 24 | Aligned Residues | 17
% Identity | 29% | Template | c2x5hD_
PDB info | PDB header:viral protein | Chain: D: PDB Molecule:orf 131; | PDBTitle: crystal structure of the orf131 l26m l51m double mutant2 from sulfolobus islandicus rudivirus 1
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 126 | . | . | . | 130 | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | 140 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Query Sequence |  | T | S | E | E | A | Q | T | V | . | . | . | . | . | . | L | S | G | Y | I | D | Y | I | S
Query Conservation |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | P | Q | D | A | E | D | L | K | L | I | A | E | F | L | E | K | Y | S | D | F | L | N
Template Known Secondary structure |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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