Phyre 2 alignment of P45581 with c2ckzC_

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Job Description | P45581
Confidence | 5.30% | Date | Thu Jan 5 12:03:27 GMT 2012
Rank | 79 | Aligned Residues | 28
% Identity | 21% | Template | c2ckzC_
PDB info | PDB header:transferase | Chain: C: PDB Molecule:dna-directed rna polymerase iii 18 kd | PDBTitle: x-ray structure of rna polymerase iii subcomplex c17-c25.
Resolution | 3.2 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | E | E | L | C | S | V | V | E | A | S | G | A | S | L | E | K | G | R | H | D | Q | L | L | T | A | L | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | M | V | H | L | Y | S | I | V | E | E | C | D | A | R | F | D | E | K | T | I | E | E | M | L | E | I | I | S
Template Known Secondary structure |  |  |  |  |  |  | T | T | S | S | S |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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