Phyre 2 alignment of P45581 with d2c35a1

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Job Description | P45581
Confidence | 7.40% | Date | Thu Jan 5 12:03:27 GMT 2012
Rank | 54 | Aligned Residues | 29
% Identity | 17% | Template | d2c35a1
SCOP info | SAM domain-like | HRDC-like | RNA polymerase II subunit RBP4 (RpoF)
Resolution | 2.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | E | E | L | C | S | V | V | E | A | S | G | A | S | L | E | K | G | R | H | D | Q | L | L | T | A | L | R | A | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | E | E | S | K | A | L | I | P | S | L | E | G | R | F | E | D | E | E | L | Q | Q | I | L | D | D | I | Q | T | K
Template Known Secondary structure |  |  |  |  |  |  |  |  | G | G | G | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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