Phyre 2 Results for P45581

Email | l.a.kelley@imperial.ac.uk
Description | P45581
Date | Thu Jan 5 12:03:27 GMT 2012
Unique Job ID | 7e076a52e8988fd8

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3a1yF_ |
|  | 50.6 | 37 | PDB header:ribosomal protein Chain: F: PDB Molecule:50s ribosomal protein p1 (l12p); PDBTitle: the structure of protein complex
2 | c3trkA_ |
|  | 46.5 | 24 | PDB header:hydrolase Chain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease
3 | d1m6ya1 |
|  | 41.3 | 18 | Fold:SAM domain-like Superfamily:Putative methyltransferase TM0872, insert domain Family:Putative methyltransferase TM0872, insert domain
4 | d1sgla_ |
|  | 40.3 | 11 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
5 | d1iooa_ |
|  | 39.4 | 7 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
6 | d1or4a_ |
|  | 36.5 | 18 | Fold:Globin-like Superfamily:Globin-like Family:Globins
7 | d1bola_ |
|  | 33.6 | 7 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
8 | c2jeuA_ |
|  | 27.4 | 27 | PDB header:transcription Chain: A: PDB Molecule:regulatory protein e2; PDBTitle: transcription activator structure reveals redox control of2 a replication initiation reaction
9 | d1wg8a1 |
|  | 26.7 | 18 | Fold:SAM domain-like Superfamily:Putative methyltransferase TM0872, insert domain Family:Putative methyltransferase TM0872, insert domain
10 | c3d3zA_ |
|  | 25.7 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:actibind; PDBTitle: crystal structure of actibind a t2 rnase
11 | d1k32a4 |
|  | 24.5 | 38 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Tail specific protease, catalytic domain
12 | c2w1oA_ |
|  | 21.4 | 11 | PDB header:translation Chain: A: PDB Molecule:60s acidic ribosomal protein p2; PDBTitle: nmr structure of dimerization domain of human ribosomal2 protein p2
13 | d1ev0a_ |
|  | 20.6 | 19 | Fold:Cell division protein MinE topological specificity domain Superfamily:Cell division protein MinE topological specificity domain Family:Cell division protein MinE topological specificity domain
14 | c2q0oC_ |
|  | 20.4 | 38 | PDB header:transcription Chain: C: PDB Molecule:probable transcriptional repressor tram; PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing
15 | c3iz5w_ |
|  | 19.9 | 22 | PDB header:ribosome Chain: W: PDB Molecule:60s ribosomal protein l22 (l22e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
16 | c2rchA_ |
|  | 19.0 | 26 | PDB header:lyase Chain: A: PDB Molecule:cytochrome p450 74a; PDBTitle: crystal structure of arabidopsis thaliana allene oxide synthase (aos,2 cytochrome p450 74a, cyp74a) complexed with 13(s)-hod at 1.85 a3 resolution
17 | c3izcw_ |
|  | 17.8 | 22 | PDB header:ribosome Chain: W: PDB Molecule:60s ribosomal protein rpl22 (l22e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
18 | d1r6na_ |
|  | 17.5 | 18 | Fold:E2 regulatory, transactivation domain Superfamily:E2 regulatory, transactivation domain Family:E2 regulatory, transactivation domain
19 | d1dixa_ |
|  | 17.4 | 11 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
20 | c2kxoA_ |
|  | 17.1 | 19 | PDB header:cell cycle Chain: A: PDB Molecule:cell division topological specificity factor; PDBTitle: solution nmr structure of the cell division regulator mine protein2 from neisseria gonorrhoeae
21 | c2w31A_ |
| not modelled | 16.7 | 15 | PDB header:oxygen transport Chain: A: PDB Molecule:globin; PDBTitle: globin domain of geobacter sulfurreducens globin-coupled2 sensor
22 | d1jy5a_ |
| not modelled | 16.2 | 14 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
23 | c1n6dE_ |
| not modelled | 15.5 | 38 | PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: tricorn protease in complex with tetrapeptide chloromethyl2 ketone derivative
24 | c1k32E_ |
| not modelled | 15.5 | 38 | PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: crystal structure of the tricorn protease
25 | c1tueG_ |
| not modelled | 15.4 | 15 | PDB header:replication Chain: G: PDB Molecule:regulatory protein e2; PDBTitle: the x-ray structure of the papillomavirus helicase in2 complex with its molecular matchmaker e2
26 | d1tueb_ |
| not modelled | 15.3 | 15 | Fold:E2 regulatory, transactivation domain Superfamily:E2 regulatory, transactivation domain Family:E2 regulatory, transactivation domain
27 | d2nnua1 |
| not modelled | 15.0 | 15 | Fold:E2 regulatory, transactivation domain Superfamily:E2 regulatory, transactivation domain Family:E2 regulatory, transactivation domain
28 | d1iyba_ |
| not modelled | 14.4 | 14 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
29 | c1vd3A_ |
| not modelled | 12.3 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:rnase ngr3; PDBTitle: ribonuclease nt in complex with 2'-ump
30 | d1faoa_ |
| not modelled | 11.8 | 15 | Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain)
31 | c1faoA_ |
| not modelled | 11.8 | 15 | PDB header:signaling protein Chain: A: PDB Molecule:dual adaptor of phosphotyrosine and 3- PDBTitle: structure of the pleckstrin homology domain from2 dapp1/phish in complex with inositol 1,3,4,5-3 tetrakisphosphate
32 | c1m6yA_ |
| not modelled | 11.4 | 17 | PDB header:transferase Chain: A: PDB Molecule:s-adenosyl-methyltransferase mraw; PDBTitle: crystal structure analysis of tm0872, a putative sam-2 dependent methyltransferase, complexed with sah
33 | d2p5ka1 |
| not modelled | 11.4 | 29 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
34 | c3uo9B_ |
| not modelled | 10.9 | 15 | PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:glutaminase kidney isoform, mitochondrial; PDBTitle: crystal structure of human gac in complex with glutamate and bptes
35 | d1wsca1 |
| not modelled | 10.6 | 18 | Fold:AMMECR1-like Superfamily:AMMECR1-like Family:AMMECR1-like
36 | c3ayhA_ |
| not modelled | 10.5 | 13 | PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase iii subunit rpc9; PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii
37 | d1aoya_ |
| not modelled | 10.3 | 23 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
38 | c3b73A_ |
| not modelled | 10.3 | 8 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phih1 repressor-like protein; PDBTitle: crystal structure of the phih1 repressor-like protein from2 haloarcula marismortui
39 | c1b4aA_ |
| not modelled | 10.2 | 29 | PDB header:repressor Chain: A: PDB Molecule:arginine repressor; PDBTitle: structure of the arginine repressor from bacillus stearothermophilus
40 | d1xdza_ |
| not modelled | 10.1 | 24 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Glucose-inhibited division protein B (GidB)
41 | d1f9na1 |
| not modelled | 10.1 | 29 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
42 | c2p0vA_ |
| not modelled | 10.0 | 24 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein bt3781; PDBTitle: crystal structure of bt3781 protein from bacteroides2 thetaiotaomicron, northeast structural genomics target3 btr58
43 | d2p0va1 |
| not modelled | 10.0 | 24 | Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:CPF0428-like
44 | d1v9va1 |
| not modelled | 9.7 | 19 | Fold:Bromodomain-like Superfamily:MAST3 pre-PK domain-like Family:MAST3 pre-PK domain-like
45 | d2nvpa1 |
| not modelled | 9.3 | 33 | Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:CPF0428-like
46 | d1b4aa1 |
| not modelled | 9.2 | 29 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
47 | c3ereD_ |
| not modelled | 9.1 | 36 | PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator
48 | d2nn5a1 |
| not modelled | 8.6 | 24 | Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain
49 | c2kxwB_ |
| not modelled | 8.3 | 50 | PDB header:calcium-binding protein/metal transport Chain: B: PDB Molecule:sodium channel protein type 2 subunit alpha; PDBTitle: structure of the c-domain fragment of apo calmodulin bound to the iq2 motif of nav1.2
50 | d1eo0a_ |
| not modelled | 7.8 | 21 | Fold:N-cbl like Superfamily:Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Family:Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
51 | c2dymE_ |
| not modelled | 7.8 | 8 | PDB header:protein turnover/protein turnover Chain: E: PDB Molecule:autophagy protein 5; PDBTitle: the crystal structure of saccharomyces cerevisiae atg5-2 atg16(1-46) complex
52 | c3ivuB_ |
| not modelled | 7.6 | 18 | PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og
53 | c3r9jD_ |
| not modelled | 7.6 | 19 | PDB header:cell cycle,hydrolase/cell cycle Chain: D: PDB Molecule:cell division topological specificity factor; PDBTitle: 4.3a resolution structure of a mind-mine(i24n) protein complex
54 | d2c35a1 |
| not modelled | 7.4 | 17 | Fold:SAM domain-like Superfamily:HRDC-like Family:RNA polymerase II subunit RBP4 (RpoF)
55 | c3ss4C_ |
| not modelled | 7.4 | 15 | PDB header:hydrolase Chain: C: PDB Molecule:glutaminase c; PDBTitle: crystal structure of mouse glutaminase c, phosphate-bound form
56 | c3htuE_ |
| not modelled | 7.2 | 20 | PDB header:protein transport Chain: E: PDB Molecule:vacuolar protein-sorting-associated protein 25; PDBTitle: crystal structure of the human vps25-vps20 subcomplex
57 | d2etha1 |
| not modelled | 6.7 | 7 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators
58 | c2q9rA_ |
| not modelled | 6.6 | 29 | PDB header:unknown function Chain: A: PDB Molecule:protein of unknown function; PDBTitle: crystal structure of a duf416 family protein (sbal_3149) from2 shewanella baltica os155 at 1.91 a resolution
59 | c3izct_ |
| not modelled | 6.5 | 25 | PDB header:ribosome Chain: T: PDB Molecule:60s ribosomal protein rpl19 (l19e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
60 | c3lvuB_ |
| not modelled | 6.5 | 13 | PDB header:transport protein Chain: B: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of abc transporter, periplasmic substrate-binding2 protein spo2066 from silicibacter pomeroyi
61 | d1wjta_ |
| not modelled | 6.4 | 23 | Fold:N-cbl like Superfamily:Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Family:Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
62 | d2c0sa1 |
| not modelled | 6.4 | 38 | Fold:ROP-like Superfamily:BAS1536-like Family:BAS1536-like
63 | c3v4gA_ |
| not modelled | 6.3 | 23 | PDB header:dna binding protein Chain: A: PDB Molecule:arginine repressor; PDBTitle: 1.60 angstrom resolution crystal structure of an arginine repressor2 from vibrio vulnificus cmcp6
64 | c2kwuA_ |
| not modelled | 6.3 | 38 | PDB header:protein binding/signaling protein Chain: A: PDB Molecule:dna polymerase iota; PDBTitle: solution structure of ubm2 of murine polymerase iota in complex with2 ubiquitin
65 | d1zq7a1 |
| not modelled | 6.3 | 19 | Fold:AMMECR1-like Superfamily:AMMECR1-like Family:AMMECR1-like
66 | d2ea9a1 |
| not modelled | 6.3 | 42 | Fold:Profilin-like Superfamily:YeeU-like Family:YagB/YeeU/YfjZ-like
67 | d1wfya_ |
| not modelled | 6.0 | 39 | Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD
68 | d2h28a1 |
| not modelled | 6.0 | 39 | Fold:Profilin-like Superfamily:YeeU-like Family:YagB/YeeU/YfjZ-like
69 | c2wqmA_ |
| not modelled | 5.8 | 14 | PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase nek7; PDBTitle: structure of apo human nek7
70 | d2dy1a4 |
| not modelled | 5.8 | 31 | Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:EF-G/eEF-2 domains III and V
71 | c1wlzD_ |
| not modelled | 5.6 | 20 | PDB header:unknown function Chain: D: PDB Molecule:cap-binding protein complex interacting protein PDBTitle: crystal structure of djbp fragment which was obtained by2 limited proteolysis
72 | d1wlza1 |
| not modelled | 5.6 | 20 | Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins
73 | d1gh6a_ |
| not modelled | 5.6 | 15 | Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain
74 | d2fcea1 |
| not modelled | 5.6 | 25 | Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like
75 | d1iira_ |
| not modelled | 5.6 | 26 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Gtf glycosyltransferase
76 | d1mw7a_ |
| not modelled | 5.6 | 23 | Fold:YebC-like Superfamily:YebC-like Family:YebC-like
77 | d1ucda_ |
| not modelled | 5.5 | 11 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
78 | d2inwa1 |
| not modelled | 5.5 | 44 | Fold:Profilin-like Superfamily:YeeU-like Family:YagB/YeeU/YfjZ-like
79 | c2ckzC_ |
| not modelled | 5.3 | 21 | PDB header:transferase Chain: C: PDB Molecule:dna-directed rna polymerase iii 18 kd PDBTitle: x-ray structure of rna polymerase iii subcomplex c17-c25.
80 | c2k42A_ |
| not modelled | 5.3 | 11 | PDB header:signaling protein Chain: A: PDB Molecule:wiskott-aldrich syndrome protein; PDBTitle: solution structure of the gtpase binding domain of wasp in2 complex with espfu, an ehec effector
81 | d2nxpa1 |
| not modelled | 5.2 | 10 | Fold:Taf5 N-terminal domain-like Superfamily:Taf5 N-terminal domain-like Family:Taf5 N-terminal domain-like
82 | c2p6pB_ |
| not modelled | 5.2 | 15 | PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase; PDBTitle: x-ray crystal structure of c-c bond-forming dtdp-d-olivose-transferase2 urdgt2
83 | c1wg8B_ |
| not modelled | 5.1 | 18 | PDB header:transferase Chain: B: PDB Molecule:predicted s-adenosylmethionine-dependent PDBTitle: crystal structure of a predicted s-adenosylmethionine-2 dependent methyltransferase tt1512 from thermus3 thermophilus hb8.