235 c3snhA_ Probab=98.70   E-value=1.5e-06  Score=86.84  Aligned_columns=256  Identities=15%

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCC-CEECCCCCCCEEEEEEEEEECCEE--------------------------------
Q ss_conf             99996298787989999985897-357587985052579999989978--------------------------------
Q batch____         5 TIGLIGNPNSGKTTLFNQLTGSR-QRVGNWAGVTVERKEGQFSTTDHQ--------------------------------   51 (773)
Q Consensus         5 ~IaLvG~PN~GKSTLfNaLtG~~-~~VgN~pGvTVe~k~g~~~~~~~~--------------------------------   51 (773)
                      .|+++|.-++||||++++|+|.. ...|.  | |+-+.+-.+......                                
T Consensus        28 qiVVvG~QSsGKSSvlEai~g~~flprg~--~-TR~p~~i~l~~~~~~~~~~~~~~~~~~~d~~~i~~~i~~~~~~~~~~  104 (652)
T c3snhA_          28 QIAVVGGQSAGKSSVLENFVGRDFLPRGS--G-TRRPLVLQLVNATTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTKG  104 (652)
T ss_dssp             EEEEEECTTCCHHHHHHHHHTSCCSCSSC--C-CCSCEEEEEEECSSCEEECTTTCSCCBCCHHHHHHHHHHHHHHTCCC
T ss_pred             CEEEECCCCCCHHHHHHHHHCCCCCCCCC--C-CCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             18998889887999988761874277999--7-12648999985798607898638754289899999999998764147


Q ss_pred             -----------------EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH---HHHHHHHHHHHHC
Q ss_conf             -----------------99997698125565310124899999999622799889999549982---4449999999854
Q batch____        52 -----------------VTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNL---ERNLYLTLQLLEL  111 (773)
Q Consensus        52 -----------------i~lVDtPGiySl~~~~~~~s~eE~var~~l~~~~~DvII~VvDatnl---er~L~l~~qL~el  111 (773)
                                       +++|||||+.+.+....    -+.+++.|+..++ .+|+.|++|++-   ...+.+..++...
T Consensus       105 ~s~~~i~l~i~~p~~~~LtlvDLPGl~~~~~~~~----i~~lv~~yi~~~~-~IILaV~~a~~D~ans~~l~lar~~Dp~  179 (652)
T c3snhA_         105 ISPVPINLRVYSPHVLNLTLVDLPGMTKPDIEFQ----IRDMLMQFVTKEN-CLILAVSPANSDLANSDALKVAKEVDPQ  179 (652)
T ss_dssp             CCSCCCCCEEEESSSCSEEEEECCCCCCCHHHHH----HHHHHHHHHHSTT-EEEEEEEETTSCSTTCHHHHHHHHHCSS
T ss_pred             CCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHH----HHHHHHHHHCCCC-EEEEEEEECCCCHHHHHHHHHHHHHCCC
T ss_conf             7867279999508976417876789875784789----9999999826988-1999996278987665899999971978


Q ss_pred             CCCEEEEEECCCCCCCCCCHHH-HHHHHHHCCCCEEEEECCCCC------CHHHHHHHHHHHHCCCCCCCCCCCHH-HHH
Q ss_conf             9979999985112672263578-999999719988998566899------98999999999712479875557556-799
Q batch____       112 GIPCIVALNMLDIAEKQNIRIE-IDALSARLGCPVIPLVSTRGR------GIEALKLAIDRYKANENVELVHYAQP-LLN  183 (773)
Q Consensus       112 g~pvIivlNk~D~a~~~g~~id-~~~Ls~~Lg~pVv~vsA~~g~------Gi~eL~~~I~~~~~~~~~~~~~~~~~-~e~  183 (773)
                      |.+++.|+||.|.+.+...-.+ ++.-...|+..++.+..+...      .+++..+.=.+...+.+........- ...
T Consensus       180 g~RTiGVlTK~Dl~~~g~~~~~il~g~~~~L~lGy~~v~nr~~~~~~~~~s~~e~~~~E~~fF~~~~~~~~~~~r~Gi~~  259 (652)
T c3snhA_         180 GQRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPY  259 (652)
T ss_dssp             SSSCCCEEECSTTSCTTCCCHHHHTTCSSCCSSCCEEECCCCCCCSSSSCCHHHHHHHHHHHHHTCHHHHTTTTTSSHHH
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf             88159984150127660128999639986455770788769968832159989999999998616998655532039799


Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99999987230266411458999984263247886322269999999999962212899999978999999999986125
Q batch____       184 EADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTL  263 (773)
Q Consensus       184 ~i~~l~~~l~~~~~~~~~R~~A~kLlE~d~~~~~~~~~~~~~l~~~ie~l~~~~~d~~~~Ia~~Ry~~i~~i~~~v~~~~  263 (773)
                      ....+.+.+.+.+               .........+....+++..++++.-.+.....-.+.+|...+-+.+-.....
T Consensus       260 L~~~L~~lL~~~i---------------~~~lP~i~~~i~~~l~~~~~~l~~lg~~~~~~~~~~~~~l~~~~~~f~~~~~  324 (652)
T c3snhA_         260 LQKVLNQQLTNHI---------------RDTLPGLRNKLQSQLLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFE  324 (652)
T ss_dssp             HHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHTTTSSSSSCCHHHHHHHHHHHTTHHHHHHH
T ss_pred             HHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999---------------9871789999999999999999863887789988999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHH
Q ss_conf             64555489999999743355
Q batch____       264 TAEPSRFTTAVDKIVLNRFL  283 (773)
Q Consensus       264 ~~~~~~lt~~iD~i~lh~~~  283 (773)
                      ..-..+..++++.++-+.+.
T Consensus       325 ~~l~G~~~a~~~~~f~e~~~  344 (652)
T c3snhA_         325 KRIEGSGGARINRIFHERFP  344 (652)
T ss_dssp             HHHHCCCHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCHHHHHHHHHHH
T ss_conf             99739886147778866787