BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (255 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P37646 Uncharacterized protein yhjH n=105 Tax=Enterobac... 525 e-148 UniRef50_B1JH86 Diguanylate phosphodiesterase n=36 Tax=Enterobac... 246 4e-64 UniRef50_D1RYS1 EAL domain containing protein involved in flagel... 236 5e-61 UniRef50_C6DBM5 Diguanylate phosphodiesterase n=8 Tax=Enterobact... 234 3e-60 UniRef50_C4S9K8 EAL domain n=1 Tax=Yersinia mollaretii ATCC 4396... 129 8e-29 UniRef50_D1RQ91 Diguanylate phosphodiesterase n=1 Tax=Serratia o... 112 9e-24 UniRef50_A8GDS4 Diguanylate phosphodiesterase n=1 Tax=Serratia p... 107 4e-22 UniRef50_A8GBY2 Diguanylate phosphodiesterase n=2 Tax=Serratia R... 103 5e-21 UniRef50_B5XUL0 Cyclic diguanylate phosphodiesterase (EAL) domai... 102 2e-20 UniRef50_C4U9T3 Cyclic diguanylate phosphodiesterase (EAL) domai... 97 8e-19 UniRef50_B1JGJ6 Diguanylate phosphodiesterase n=29 Tax=Yersinia ... 94 4e-18 UniRef50_B2VHG6 Putative uncharacterized protein n=1 Tax=Erwinia... 93 1e-17 UniRef50_C4T2A2 EAL domain n=1 Tax=Yersinia intermedia ATCC 2990... 92 1e-17 UniRef50_C4TWJ2 Putative uncharacterized protein n=2 Tax=Yersini... 89 2e-16 UniRef50_C8QBJ8 Diguanylate phosphodiesterase n=1 Tax=Pantoea sp... 83 7e-15 UniRef50_D2TBT3 Uncharacterized protein yhjH n=2 Tax=Erwinia pyr... 80 8e-14 UniRef50_A7MG13 Putative uncharacterized protein n=1 Tax=Cronoba... 79 1e-13 UniRef50_B8IBV5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Me... 77 4e-13 UniRef50_C8QEV2 Diguanylate phosphodiesterase n=1 Tax=Pantoea sp... 75 2e-12 UniRef50_C6C3T2 Diguanylate phosphodiesterase n=3 Tax=Dickeya Re... 74 5e-12 UniRef50_A4BJ14 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 72 2e-11 UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 ... 71 4e-11 UniRef50_A6D1N0 GGDEF family protein n=1 Tax=Vibrio shilonii AK1... 70 6e-11 UniRef50_A5VGJ2 Periplasmic sensor diguanylate cyclase/phosphodi... 69 1e-10 UniRef50_B7KWE1 Diguanylate cyclase/phosphodiesterase n=4 Tax=Me... 69 1e-10 UniRef50_B5ERW6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 69 1e-10 UniRef50_B5JRM9 Response regulator receiver modulated diguanylat... 69 2e-10 UniRef50_B5RJW6 Putative uncharacterized protein n=2 Tax=Klebsie... 68 3e-10 UniRef50_Q163Y3 GGDEF/EAL domain protein n=2 Tax=Roseobacter Rep... 68 4e-10 UniRef50_C0BZZ6 Putative uncharacterized protein n=1 Tax=Clostri... 67 4e-10 UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photoba... 67 5e-10 UniRef50_B0U8W3 Diguanylate cyclase/phosphodiesterase n=7 Tax=Me... 67 6e-10 UniRef50_B5JXV5 Diguanylate cyclase/phosphodiesterase with PAS/P... 67 6e-10 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 67 7e-10 UniRef50_C3K5S5 Putative EAL domain signaling protein n=1 Tax=Ps... 66 1e-09 UniRef50_A9CEW9 GGDEF family protein n=1 Tax=Agrobacterium tumef... 66 1e-09 UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 66 1e-09 UniRef50_Q21XF0 Response regulator receiver modulated diguanylat... 66 1e-09 UniRef50_B2JTL4 Diguanylate phosphodiesterase n=1 Tax=Burkholder... 66 1e-09 UniRef50_C3LLQ7 EAL family protein n=37 Tax=Vibrio RepID=C3LLQ7_... 65 2e-09 UniRef50_C4UWQ5 EAL domain n=6 Tax=Yersinia RepID=C4UWQ5_YERRO 65 2e-09 UniRef50_A6W9D1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ki... 65 2e-09 UniRef50_A6W5N9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ki... 65 2e-09 UniRef50_B9JV65 GGDEF family protein n=20 Tax=Rhizobiales RepID=... 65 2e-09 UniRef50_C9P447 Putative uncharacterized protein n=1 Tax=Vibrio ... 65 2e-09 UniRef50_C9PH57 Putative signaling membrane protein n=1 Tax=Vibr... 65 2e-09 UniRef50_Q21RH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 65 2e-09 UniRef50_A4BEY1 GGDEF domain/EAL domain protein n=1 Tax=Reinekea... 65 2e-09 UniRef50_C9NRD6 Putative uncharacterized protein n=1 Tax=Vibrio ... 65 2e-09 UniRef50_Q0G035 Putative uncharacterized protein n=1 Tax=Fulvima... 65 2e-09 UniRef50_C6AZK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 65 3e-09 UniRef50_B0UKA4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Me... 65 3e-09 UniRef50_Q98JQ6 Mlr1828 protein n=1 Tax=Mesorhizobium loti RepID... 65 3e-09 UniRef50_A0KH60 Sensory box/GGDEF family protein n=1 Tax=Aeromon... 65 3e-09 UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromob... 65 3e-09 UniRef50_B7K503 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ch... 65 3e-09 UniRef50_A4BIV5 GGDEF family protein n=1 Tax=Reinekea blandensis... 65 3e-09 UniRef50_C4L760 Diguanylate cyclase/phosphodiesterase with extra... 64 3e-09 UniRef50_B8K8F7 FOG: EAL domain protein n=2 Tax=Vibrio RepID=B8K... 64 3e-09 UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseu... 64 3e-09 UniRef50_B6AQB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 64 4e-09 UniRef50_B2VEL6 Putative uncharacterized protein ydiV n=1 Tax=Er... 64 4e-09 UniRef50_C1D6L1 EAL domain protein n=1 Tax=Laribacter hongkongen... 64 4e-09 UniRef50_A0NV57 Putative diguanylate cyclase/phosphodiesterase (... 64 4e-09 UniRef50_B3IA09 Putative cyclic diguanylate phosphodiesterase n=... 64 5e-09 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 64 5e-09 UniRef50_A7JZR6 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 64 5e-09 UniRef50_B2JHP0 Diguanylate phosphodiesterase n=1 Tax=Burkholder... 64 5e-09 UniRef50_B0MNA3 Putative uncharacterized protein n=1 Tax=Eubacte... 64 6e-09 UniRef50_UPI0001AEC6AC sensory box/GGDEF family protein n=1 Tax=... 64 6e-09 UniRef50_A6W234 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 64 6e-09 UniRef50_C6JFR2 GGDEF/EAL/PAS-domain-containing protein n=1 Tax=... 64 7e-09 UniRef50_C1M531 Putative uncharacterized protein n=2 Tax=Citroba... 63 8e-09 UniRef50_C9PFH4 Putative uncharacterized protein n=1 Tax=Vibrio ... 63 8e-09 UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 63 8e-09 UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/P... 63 8e-09 UniRef50_B4RXD9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Al... 63 1e-08 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 63 1e-08 UniRef50_D0Z2V6 Rtn protein n=1 Tax=Photobacterium damselae subs... 63 1e-08 UniRef50_A6W9K6 Diguanylate phosphodiesterase n=3 Tax=Kineococcu... 63 1e-08 UniRef50_Q89BZ8 Blr8000 protein n=1 Tax=Bradyrhizobium japonicum... 63 1e-08 UniRef50_C1D667 Predicted signal transduction protein n=1 Tax=La... 63 1e-08 UniRef50_Q5QVU6 Signaling protein (EAL,CBS,GGDEF domains) n=2 Ta... 62 1e-08 UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/P... 62 1e-08 UniRef50_C8WAS4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Zy... 62 1e-08 UniRef50_B5BIE6 Putative uncharacterized protein n=34 Tax=Salmon... 62 1e-08 UniRef50_Q2BJL1 Signal transduction protein containing membrane,... 62 1e-08 UniRef50_A4A706 Hypothetical signaling protein CC0091 n=1 Tax=Co... 62 2e-08 UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=As... 62 2e-08 UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 T... 62 2e-08 UniRef50_C7GCP1 Sensory box/GGDEF family protein n=1 Tax=Rosebur... 62 2e-08 UniRef50_Q5R0L9 Signaling protein with a sensor domain, CHASE, G... 62 2e-08 UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 62 2e-08 UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio ... 62 2e-08 UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elon... 62 2e-08 UniRef50_A4BH36 Sensory box/GGDEF family protein n=1 Tax=Reineke... 62 2e-08 UniRef50_A4BB01 Putative uncharacterized protein n=1 Tax=Reineke... 62 2e-08 UniRef50_A8H0Z8 Response regulator receiver modulated diguanylat... 62 2e-08 UniRef50_B8KAR1 Sensory box protein n=1 Tax=Vibrio parahaemolyti... 62 2e-08 UniRef50_Q1LE38 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bu... 62 2e-08 UniRef50_B8EE65 Response regulator receiver modulated diguanylat... 62 2e-08 UniRef50_A1S8S6 Putative diguanylate phosphodiesterase n=1 Tax=S... 62 2e-08 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 62 2e-08 UniRef50_Q07KB0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rh... 62 2e-08 UniRef50_C9QLI2 Putative uncharacterized protein n=1 Tax=Vibrio ... 62 2e-08 UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 62 3e-08 UniRef50_UPI0001C362AF diguanylate cyclase/phosphodiesterase wit... 62 3e-08 UniRef50_A7K0A9 Sensory box/GGDEF family protein n=6 Tax=Vibrio ... 62 3e-08 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 61 3e-08 UniRef50_C8Q5S9 Putative diguanylate phosphodiesterase n=1 Tax=P... 61 3e-08 UniRef50_A5L0X0 Probable response regulator n=3 Tax=Vibrionales ... 61 3e-08 UniRef50_A5F7H4 PAS/EAL family protein n=26 Tax=Vibrio cholerae ... 61 3e-08 UniRef50_A4BB62 Inner membrane protein PLUS sensory box protein ... 61 3e-08 UniRef50_C4L705 Diguanylate cyclase/phosphodiesterase with GAF s... 61 3e-08 UniRef50_A8M3L5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sa... 61 3e-08 UniRef50_B4U6R5 Diguanylate phosphodiesterase n=1 Tax=Hydrogenob... 61 4e-08 UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 T... 61 4e-08 UniRef50_Q0EYZ1 Putative uncharacterized protein n=1 Tax=Maripro... 61 4e-08 UniRef50_Q2CI03 Diguanylate cyclase, putative n=1 Tax=Oceanicola... 61 4e-08 UniRef50_A4EE01 Putative uncharacterized protein n=1 Tax=Roseoba... 61 4e-08 UniRef50_B8GQM0 Sensory box protein n=1 Tax=Thioalkalivibrio sp.... 61 4e-08 UniRef50_B4S0H1 Sensory box/GGDEF family protein n=1 Tax=Alterom... 61 5e-08 UniRef50_A6F7T4 PAS:GGDEF n=1 Tax=Moritella sp. PE36 RepID=A6F7T... 61 5e-08 UniRef50_D0YY24 Putative uncharacterized protein n=1 Tax=Photoba... 61 5e-08 UniRef50_D1T1F1 Response regulator receiver modulated diguanylat... 61 5e-08 UniRef50_Q5FQJ2 Sensory box/GGDEF family protein n=1 Tax=Glucono... 60 5e-08 UniRef50_Q11KT0 Periplasmic sensor diguanylate cyclase/phosphodi... 60 5e-08 UniRef50_A4FDX2 PAS:GGDEF n=1 Tax=Saccharopolyspora erythraea NR... 60 5e-08 UniRef50_B5IX41 Cyclic diguanylate phosphodiesterase domain prot... 60 5e-08 UniRef50_B1JAX5 Diguanylate phosphodiesterase with GAF sensor(S)... 60 5e-08 UniRef50_B8H226 CHASE4-family GGDEF/EAL protein n=2 Tax=Caulobac... 60 6e-08 UniRef50_B1YEJ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 60 6e-08 UniRef50_A1SBP6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sh... 60 6e-08 UniRef50_C1RLP6 Diguanylate cyclase (GGDEF) domain-containing pr... 60 6e-08 UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 60 6e-08 UniRef50_C0QQR2 Response regulator receiver modulated diguanylat... 60 7e-08 UniRef50_A4WA59 Periplasmic sensor diguanylate cyclase/phosphodi... 60 7e-08 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 60 7e-08 UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6... 60 7e-08 UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=N... 60 7e-08 UniRef50_B2UXQ0 Putative signaling protein n=3 Tax=Clostridium b... 60 7e-08 UniRef50_D0KZ53 Diguanylate phosphodiesterase n=1 Tax=Halothioba... 60 7e-08 UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=R... 60 7e-08 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 60 7e-08 UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/P... 60 8e-08 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 60 8e-08 UniRef50_C9QJS2 Response regulator VieA n=1 Tax=Vibrio orientali... 60 8e-08 UniRef50_Q2B495 Putative uncharacterized protein n=1 Tax=Bacillu... 60 8e-08 UniRef50_C9Y2Q8 Cyclic di-GMP regulator cdgR n=2 Tax=Cronobacter... 60 8e-08 UniRef50_A0KL96 Response regulator n=2 Tax=Proteobacteria RepID=... 60 9e-08 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 60 9e-08 UniRef50_Q3SJ51 Putative diguanylate cyclase/phosphodiesterase (... 60 9e-08 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 60 9e-08 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 60 9e-08 UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Pho... 60 9e-08 UniRef50_B9Z336 Response regulator receiver modulated diguanylat... 60 1e-07 UniRef50_A8RTD5 Putative uncharacterized protein n=3 Tax=cellula... 60 1e-07 UniRef50_Q2RWN2 Response regulator receiver modulated diguanylat... 60 1e-07 UniRef50_B9ZKL4 Diguanylate phosphodiesterase n=1 Tax=Thioalkali... 60 1e-07 UniRef50_A6G0E1 Putative uncharacterized protein n=1 Tax=Plesioc... 59 1e-07 UniRef50_C4DQQ0 Diguanylate cyclase (GGDEF) domain-containing pr... 59 1e-07 UniRef50_C1D4L3 EAL domain protein n=1 Tax=Laribacter hongkongen... 59 1e-07 UniRef50_B4REU2 Diguanylate phosphodiesterase n=1 Tax=Phenylobac... 59 1e-07 UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 59 1e-07 UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromatic... 59 1e-07 UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 T... 59 1e-07 UniRef50_A4TD28 Diguanylate phosphodiesterase n=1 Tax=Mycobacter... 59 1e-07 UniRef50_D0IKD2 Rtn protein n=7 Tax=Vibrio RepID=D0IKD2_9VIBR 59 1e-07 UniRef50_A3UF66 Putative phosphodiesterase n=1 Tax=Oceanicaulis ... 59 1e-07 UniRef50_Q1YLA3 Signal transduction protein family n=1 Tax=Auran... 59 1e-07 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 59 1e-07 UniRef50_C6C7J2 Putative diguanylate phosphodiesterase n=1 Tax=D... 59 1e-07 UniRef50_D1B415 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 59 1e-07 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 59 1e-07 UniRef50_C6ME30 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 59 1e-07 UniRef50_Q4KHP6 Response regulator/EAL domain protein n=1 Tax=Ps... 59 1e-07 UniRef50_B6A161 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 59 1e-07 UniRef50_B8IW45 Diguanylate phosphodiesterase n=1 Tax=Methylobac... 59 1e-07 UniRef50_B5IIK9 Y4lL n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIK9... 59 1e-07 UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2... 59 1e-07 UniRef50_B6R1T0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 59 1e-07 UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax... 59 1e-07 UniRef50_A9W1F1 Diguanylate cyclase n=7 Tax=Alphaproteobacteria ... 59 1e-07 UniRef50_B8KB61 Ggdef family protein n=2 Tax=Vibrio RepID=B8KB61... 59 1e-07 UniRef50_A6W4V7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ki... 59 1e-07 UniRef50_C6C4X5 EAL domain protein n=1 Tax=Dickeya dadantii Ech7... 59 2e-07 UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacill... 59 2e-07 UniRef50_Q1YHR6 Putative uncharacterized protein n=1 Tax=Auranti... 59 2e-07 UniRef50_B4SIC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 59 2e-07 UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/P... 59 2e-07 UniRef50_A1KBS5 Conserved hypothetical signaling protein n=1 Tax... 59 2e-07 UniRef50_B9YRF0 Diguanylate phosphodiesterase n=1 Tax='Nostoc az... 59 2e-07 UniRef50_Q2SM38 Predicted signal transduction protein containing... 59 2e-07 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 59 2e-07 UniRef50_A6VUG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 59 2e-07 UniRef50_A3WMF3 PAS:GGDEF protein n=1 Tax=Idiomarina baltica OS1... 59 2e-07 UniRef50_P32701 Uncharacterized protein yjcC n=108 Tax=Enterobac... 59 2e-07 UniRef50_Q1ZWI1 Putative uncharacterized protein n=1 Tax=Photoba... 59 2e-07 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 59 2e-07 UniRef50_B5EUH5 Diguanylate cyclase/phosphodiesterase domain 2 n... 59 2e-07 UniRef50_B7DP82 Diguanylate phosphodiesterase n=1 Tax=Alicycloba... 59 2e-07 UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI 59 2e-07 UniRef50_B4S296 GGDEF/EAL domain protein n=2 Tax=Alteromonas mac... 59 2e-07 UniRef50_A0P381 Putative diguanylate phosphodiesterase (EAL doma... 59 2e-07 UniRef50_A6F867 Sensory box/GGDEF family protein n=1 Tax=Moritel... 59 2e-07 UniRef50_Q21L06 Response regulator receiver modulated diguanylat... 59 2e-07 UniRef50_A4C4P9 Putative diguanylate cyclase/phosphodiesterase (... 59 2e-07 UniRef50_B0TE28 Eal domain protein n=1 Tax=Heliobacterium modest... 59 2e-07 UniRef50_A6V5X2 Cyclic diguanylate phosphodiesterase (EAL) domai... 59 2e-07 UniRef50_D0M9B0 Sensory box/GGDEF family protein n=4 Tax=Vibrio ... 59 2e-07 UniRef50_A0JTU2 Diguanylate cyclase/phosphodiesterase with PAS/P... 59 2e-07 UniRef50_Q2P5Q4 Response regulator n=11 Tax=Proteobacteria RepID... 59 2e-07 UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acineto... 58 2e-07 UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudov... 58 2e-07 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 58 2e-07 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 58 2e-07 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 58 2e-07 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 58 3e-07 UniRef50_C3MGT7 Putative diguanylate cyclase (GGDEF)/phosphodies... 58 3e-07 UniRef50_C7DBK4 Sensory box/ggdef family protein n=1 Tax=Thalass... 58 3e-07 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 58 3e-07 UniRef50_B9L6X7 Sensory box sensor/ggdef/eal domain protein n=1 ... 58 3e-07 UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Ma... 58 3e-07 UniRef50_B8ERS4 Diguanylate cyclase/phosphodiesterase with GAF s... 58 3e-07 UniRef50_A6W5C3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ki... 58 3e-07 UniRef50_C9XPS2 Putative signaling protein n=6 Tax=Clostridium d... 58 3e-07 UniRef50_Q7MEA0 GGDEF family protein n=46 Tax=Vibrionales RepID=... 58 3e-07 UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 ... 58 3e-07 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 58 3e-07 UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction ... 58 3e-07 UniRef50_B9R1B0 Cyclic diguanylate phosphodiesterase domain prot... 58 3e-07 UniRef50_A1K7N7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 58 3e-07 UniRef50_B1M7E5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 58 3e-07 UniRef50_D0HE44 GGDEF family protein n=5 Tax=Vibrio RepID=D0HE44... 58 3e-07 UniRef50_Q2SEI0 Predicted signal transduction protein containing... 58 3e-07 UniRef50_Q2BQA3 Signaling protein (CHEY,EAL,GGDEF domains) n=1 T... 58 3e-07 UniRef50_C3VA06 Putative phospholipase A2 family protein n=1 Tax... 58 3e-07 UniRef50_B5FFC2 Sensory box/ggdef family protein n=2 Tax=Vibrio ... 58 3e-07 UniRef50_A1TZZ1 Diguanylate phosphodiesterase n=2 Tax=Alteromona... 58 3e-07 UniRef50_A9BH42 Diguanylate cyclase/phosphodiesterase with PAS/P... 58 3e-07 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 58 3e-07 UniRef50_A8M5E4 Diguanylate cyclase/phosphodiesterase n=4 Tax=Mi... 58 3e-07 UniRef50_B9QX90 Cyclic diguanylate phosphodiesterase domain prot... 58 3e-07 UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 58 3e-07 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 58 3e-07 UniRef50_Q483U6 Response regulator n=1 Tax=Colwellia psychreryth... 58 3e-07 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 58 4e-07 UniRef50_C1F918 Sensory box/GGDEF family protein n=1 Tax=Acidoba... 58 4e-07 UniRef50_A6UJV0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Si... 58 4e-07 UniRef50_D0XT35 Diguanylate cyclase/phosphodiesterase n=1 Tax=Br... 58 4e-07 >UniRef50_P37646 Uncharacterized protein yhjH n=105 Tax=Enterobacteriaceae RepID=YHJH_ECOLI Length = 255 Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust. Identities = 255/255 (100%), Positives = 255/255 (100%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS Sbjct: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 Query: 61 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI 120 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI Sbjct: 61 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI 120 Query: 121 LRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI 180 LRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI Sbjct: 121 LRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI 180 Query: 181 ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS 240 ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS Sbjct: 181 ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS 240 Query: 241 RPAPIETLNTAVLAL 255 RPAPIETLNTAVLAL Sbjct: 241 RPAPIETLNTAVLAL 255 >UniRef50_B1JH86 Diguanylate phosphodiesterase n=36 Tax=Enterobacteriaceae RepID=B1JH86_YERPY Length = 281 Score = 246 bits (629), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 114/234 (48%), Positives = 161/234 (68%) Query: 16 IESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVS 75 IE + + FW QC+R YT+QPIY+T G L+A+ELLT V HP P RL P+ YF+ I+ Sbjct: 40 IERTKGQSFWRQCQRRYTFQPIYRTSGALLAIELLTAVFHPSAPETRLSPEDYFSTISTG 99 Query: 76 HRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELV 135 R++VV EQ++++ Q F+ H +L S+NIDG L+A+++ R I+ +P++RFEL+ Sbjct: 100 ARLDVVLEQLNMVKQWHQIFVHHSVLVSINIDGQVLVAMQEDHAAKRLIDAMPYIRFELL 159 Query: 136 EHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGR 195 EH+ D+ FA + E LWLDDFG+G+ANF++ RY+YIK+AR+LF +L+ S G Sbjct: 160 EHVDTSLDTPFARIAEADRLWLDDFGSGLANFTSFISWRYEYIKVARDLFTVLQDSEAGN 219 Query: 196 TLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 LF L+ LM+RY +GVIVEGVET +EW VQ S A AAQG++LSRP + L Sbjct: 220 RLFFTLVTLMDRYSKGVIVEGVETSQEWAMVQRSDAVAAQGYYLSRPTSFDGLQ 273 >UniRef50_D1RYS1 EAL domain containing protein involved in flagellar function n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RYS1_SEROD Length = 309 Score = 236 bits (603), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 116/232 (50%), Positives = 156/232 (67%) Query: 19 LQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRM 78 ++ +R+W QC R YT+QPIY+T G L+A+ELLTVV HP P + P+RYF + VS R+ Sbjct: 68 VKTQRYWRQCRRLYTFQPIYRTSGALLAIELLTVVYHPSAPDKPQSPERYFAALDVSSRL 127 Query: 79 EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHI 138 +++EQ+ L I H L+ SVNIDG L AL++ ++ RQI +P+LRFELVEH Sbjct: 128 RIIQEQLSFLQGWQPHLIRHALMVSVNIDGIALQALQRHAELQRQITAMPYLRFELVEHA 187 Query: 139 RLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLF 198 + + LWLDDFG+G+ANF A+S RY YIK+ARELF +L+Q+ +G L Sbjct: 188 GMALSCPLQQITGAERLWLDDFGSGLANFCAISTWRYQYIKVARELFTLLKQTEDGIELL 247 Query: 199 SQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 L+ +MN++ GVIVEGVET +EW VQ S A AAQG++LSRPA ETL T Sbjct: 248 FTLIKIMNQFSEGVIVEGVETEQEWLLVQRSGALAAQGYYLSRPARFETLQT 299 >UniRef50_C6DBM5 Diguanylate phosphodiesterase n=8 Tax=Enterobacteriaceae RepID=C6DBM5_PECCP Length = 263 Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 121/244 (49%), Positives = 165/244 (67%), Gaps = 3/244 (1%) Query: 13 EASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEI 72 + S ESL +W QC+R YT+QPIY+T G+LMA+ELLT V P P + + P++YF I Sbjct: 22 QGSEESL-SADYWHQCQRRYTFQPIYRTSGKLMAIELLTSVFSPTLPQKFISPEKYFANI 80 Query: 73 TVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRF 132 V R+ ++ EQ+ LL+Q + F L ASVNIDG TL+AL+ + R I +PW+RF Sbjct: 81 DVETRLLIIVEQLQLLSQWSFRFTRDDLFASVNIDGMTLLALQNNLEAKRLIAAMPWIRF 140 Query: 133 ELVEH-IRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQS 191 E+VE+ LPK+ + E LWLDDFG GMANFS+L +YD IK+ARELF++L+QS Sbjct: 141 EMVENQGGLPKE-ILTKLPEAQTLWLDDFGCGMANFSSLMLAQYDCIKVARELFILLQQS 199 Query: 192 PEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTA 251 EG+T+F L+ L++R+C V++EG+ET EEW VQ S A+AAQG++LSRP P E Sbjct: 200 GEGKTVFPALIALLSRFCNYVVIEGIETKEEWAIVQASHAYAAQGYYLSRPQPFENFEAL 259 Query: 252 VLAL 255 L L Sbjct: 260 KLEL 263 >UniRef50_C4S9K8 EAL domain n=1 Tax=Yersinia mollaretii ATCC 43969 RepID=C4S9K8_YERMO Length = 225 Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 7/222 (3%) Query: 34 WQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKAD 93 +QPIY GRL+AVELL+ NP Q L PD +F + + V Q LL Sbjct: 2 FQPIYNLEGRLLAVELLSRFHRQDNPQQLLEPDYFFRHAHAAPKRRVTAYQFSLLQCCLP 61 Query: 94 FFIEHGLLASVNIDGPTLIALRQQPKILRQIERL-PWLRFELVE-----HIRLPKDSTFA 147 + EH ++AS+NID + P I R ++ L PW+R E+ E +++ D Sbjct: 62 WLAEHHIVASLNIDRMQAQDILSNPPIYRLLQSLAPWVRLEINECFLLGRMKVNDDPLLV 121 Query: 148 SMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNR 207 ++ PLWLDDFG+G ANFS L ++ +K+ E+F + + GR L LL LM Sbjct: 122 ALSLCSPLWLDDFGSGAANFSTLFSGLFEVVKLDHEIFSLFMAAESGRILMPALLALMQE 181 Query: 208 YCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 + G+I+EGVET E + VQ+ QG FL +P++ L+ Sbjct: 182 HSFGLIIEGVETREIQQQVQDWSVLGLQG-FLWPTSPLDELD 222 >UniRef50_D1RQ91 Diguanylate phosphodiesterase n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RQ91_SEROD Length = 246 Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 5/211 (2%) Query: 31 AYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQ 90 +Y +QP+Y GRL+AVE+L + L+ +P D T +T R+E+ EQ+ L Q Sbjct: 12 SYVFQPVYSMDGRLLAVEILCRF-NSLDGDLAMPADIGITLLTPDQRIELFNEQLRLAEQ 70 Query: 91 KADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVE---HIRLPKDSTFA 147 A +FIEH +L ++NI+ + A+ + +++ + ++ FE+ E ++ K++T Sbjct: 71 YASWFIEHDVLLTLNIEETLVDAILTDELLCQRLRQWSFIAFEISEAFPNLSAGKNNTKV 130 Query: 148 S-MCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMN 206 S + E LWLD+FG+G A +AL + +DY+KI + + L + LL +N Sbjct: 131 SRLSEMFTLWLDNFGSGQATLNALYDGLFDYVKIDKHFYWQLFTHQGYDVVIDSLLKNIN 190 Query: 207 RYCRGVIVEGVETPEEWRDVQNSPAFAAQGW 237 C+GVIV G+E E + ++++ QG+ Sbjct: 191 LLCKGVIVCGIEKKEYFNKLRHAGVLGLQGF 221 >UniRef50_A8GDS4 Diguanylate phosphodiesterase n=1 Tax=Serratia proteamaculans 568 RepID=A8GDS4_SERP5 Length = 245 Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 114/211 (54%), Gaps = 5/211 (2%) Query: 31 AYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQ 90 +Y +QP+Y GRL+AVE+L + L+ +P D ++ R+E+ EQ+ L Q Sbjct: 12 SYVFQPVYSMEGRLLAVEILNRF-NSLDGDLAMPADIGINLLSTEQRIELFNEQLSLAEQ 70 Query: 91 KADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVE---HIRLPKDS-TF 146 A +F+E+ +L +++++ + + ++ +I + ++ FE+ E ++ K++ Sbjct: 71 NAAWFVENDVLLTLDVEEILVDLILADDQLCERIRQWSFIAFEISEGFPNLSAGKNNEKI 130 Query: 147 ASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMN 206 + E LWLDDFG+G A +AL + +DY+KI + + L + LL +N Sbjct: 131 RRLSEKFSLWLDDFGSGQATLTALYDGLFDYVKIDKRFYWQLFTHQGYDVVIDSLLKNIN 190 Query: 207 RYCRGVIVEGVETPEEWRDVQNSPAFAAQGW 237 C+GVIVEG+E E + ++++ F QG+ Sbjct: 191 LLCKGVIVEGIEREEYFNKLRHAGVFGLQGF 221 >UniRef50_A8GBY2 Diguanylate phosphodiesterase n=2 Tax=Serratia RepID=A8GBY2_SERP5 Length = 238 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 119/226 (52%), Gaps = 7/226 (3%) Query: 32 YTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQK 91 Y +QP++ G+L+AVE L+ T + P+++F + R+E++ EQ+ L+ + Sbjct: 14 YVFQPMFAKSGQLLAVECLSRFTFN-SEYAHFSPEQFFRSADSATRIEILLEQVSLIEKY 72 Query: 92 ADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEH-IRLPKDSTFA--S 148 +F ++ ++A++N+D +L +L +I + FE+ E+ RL KD S Sbjct: 73 NHWFRKNQVIATLNVDDHSLRSL-ANSHFAERINATRCIHFEISENSTRLVKDRVHGDPS 131 Query: 149 MCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRY 208 + + WLDDFG+G A FSAL ++ ++K+ R L + G L LL + Sbjct: 132 LKSY-SFWLDDFGSGYAGFSALYNSQFRFVKLDRFLLWDFMKKSGGEGLMRALLRFFHLN 190 Query: 209 CRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 VI+EGVETPE + + P +A QG L + + I+ LN+ + A Sbjct: 191 HYKVIIEGVETPEHKKWLDEMPYYALQGK-LWKESDIKDLNSLLTA 235 >UniRef50_B5XUL0 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=8 Tax=Enterobacteriaceae RepID=B5XUL0_KLEP3 Length = 238 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 8/207 (3%) Query: 32 YTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQK 91 Y +Q ++ G L+AVE L+ + + P+ +F T + R + EQ+ L+ + Sbjct: 20 YVFQKMFSPQGTLVAVECLSRF-----DNLTVSPEYFFRHATAAVRERIFLEQLALIEKH 74 Query: 92 ADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMC- 150 ++F+ + + A++N+D L LRQ+ +I +I L + FE+ E+ +++ A+ Sbjct: 75 KEWFLHNNISATINVDDHILNLLRQK-EIKDKIAALACVHFEVTENAENLLNNSLAAWQN 133 Query: 151 -EFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYC 209 + LWLDDFG+G A +A+ +DY+KI ++ F L + GR L L+ ++R Sbjct: 134 PQDTSLWLDDFGSGYAGINAIRGYHFDYVKIDKDFFWHLMRKESGRQLMDALVTFLSRNH 193 Query: 210 RGVIVEGVETPEEWRDVQNSPAFAAQG 236 VI+EGVE+ + +Q FA QG Sbjct: 194 HNVIIEGVESEAHKKWLQGMEWFAIQG 220 >UniRef50_C4U9T3 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=5 Tax=Yersinia RepID=C4U9T3_YERAL Length = 235 Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 14/224 (6%) Query: 23 RFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPD--RYFTEITVSHRMEV 80 + ++ +Y +PI++ G L+A ELL+ + S L D R+ E+ V + ++ Sbjct: 4 KLNIEVNCSYVCEPIHKQDGSLLAAELLSRFSAK---SVDLAIDTVRFIKELDVDGKTDL 60 Query: 81 VKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRL 140 +Q+ ++ +D+FI H + S+NID + + I + ++ +P+LR E+ E Sbjct: 61 FCDQLRVVKAYSDWFITHHVFLSINIDFDLAGVIVRDANIRQILDEMPFLRLEITESFSN 120 Query: 141 PKDST----FASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRT 196 D + + PLWLD+ G+G + +A++ ++Y+KI + F + Sbjct: 121 LSDGMNNPLLRELSKLYPLWLDNLGSGGSTLNAVTANIFEYVKIDKYFF-----WQHNKN 175 Query: 197 LFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS 240 F L+ + +YC GVIV GVE +E + S A QG+ S Sbjct: 176 TFPILISNIKKYCLGVIVVGVENQDEAAQLMGSSIDAMQGYLFS 219 >UniRef50_B1JGJ6 Diguanylate phosphodiesterase n=29 Tax=Yersinia RepID=B1JGJ6_YERPY Length = 230 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 16/225 (7%) Query: 23 RFWLQCERAYTWQPIYQTCGRLMAVELLT-VVTHPLNPSQRLPPD--RYFTEITVSHRME 79 + ++ +Y +PI + G L+AVELL+ P++ LP D ++ E+ ++ + + Sbjct: 2 KLNIKVNCSYVCEPIRKQDGSLLAVELLSRFSATPVD----LPIDVEKFINELDINGKND 57 Query: 80 VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIR 139 + + Q+ + +D+FI + +L S+NID + + ++ +P+LR E++E Sbjct: 58 LFQNQLQAVKAYSDWFITNNVLLSINIDFDLASVIVTDAPTRQLLDEMPFLRLEIMETFS 117 Query: 140 LPKDST----FASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGR 195 D + PLWLDD G+G + +A++ ++YIKI + F + Sbjct: 118 NLSDGMNNPLLRELASLYPLWLDDLGSGGSTLNAVTANIFEYIKIDKHFFWQ-----HNK 172 Query: 196 TLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS 240 F L++ + +YC GVIV GVE E + S A QG+ + Sbjct: 173 HTFPILINNIKKYCLGVIVVGVENQGESEQLAGSNIDAMQGYLFN 217 >UniRef50_B2VHG6 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis RepID=B2VHG6_ERWT9 Length = 241 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%) Query: 32 YTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQK 91 Y + P+Y GR +A E LT H N + +F + R + Q+ + Sbjct: 14 YVFHPMYNGAGRTIAFECLTRFPHLANQGSDCV-EHFFLHASAQQRRAIFLSQLAFIEVH 72 Query: 92 ADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHI-RLPKDSTFASM- 149 +F + G++ ++N+D TL +L Q +++R+++++ ++ FE+ E+ RL S+ Sbjct: 73 QTWFRQRGVIVTLNVDDDTL-SLLAQSEMIRRVKKMGFIHFEVHENASRLFWQQQLHSLL 131 Query: 150 CEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYC 209 LWLDDFG G+A L + +IKI +++F + P G+ + LL + R Sbjct: 132 TRHYSLWLDDFGNGIARMQMLPGCAFRFIKIDKQVFWNYWRHPTGKRQLASLLTELQRGN 191 Query: 210 RGVIVEGVETPEEWRDVQNSPAFAAQG 236 V++EG+ET + + + N P +A QG Sbjct: 192 FCVVIEGIETGAQRQWLGNMPFYALQG 218 >UniRef50_C4T2A2 EAL domain n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4T2A2_YERIN Length = 386 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 9/211 (4%) Query: 34 WQPIYQTCGRLMAVELLTVV-THPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 ++P+Y G L+A+E LT + +H + LP D ++ +T + +++ Q+ L Sbjct: 154 FEPLYSPKGVLIALEALTRLRSHDTSKDTLLPTD-FYMAVTSNVASQILDWQLQCLMMLK 212 Query: 93 DFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEH-----IRLPKDSTFA 147 + G+ S+N++ A Q L+ + P LR E+ EH I KD Sbjct: 213 SWLEHRGVRVSLNVNRVLAHACIDQADTLKTLS--PLLRLEINEHFFTQKIVPDKDPLLH 270 Query: 148 SMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNR 207 S+ PLWLDDFG G AN AL +++ IK+ +F L S G L Sbjct: 271 SLARICPLWLDDFGIGSANLQALMTRQFEAIKLDASVFRRLNNSLSGHLFIDALRQTAAE 330 Query: 208 YCRGVIVEGVETPEEWRDVQNSPAFAAQGWF 238 +++EGVET E ++ S A+A QGW+ Sbjct: 331 VGTRLVIEGVETAEHLAELSQSGAWALQGWY 361 >UniRef50_C4TWJ2 Putative uncharacterized protein n=2 Tax=Yersinia RepID=C4TWJ2_YERKR Length = 243 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 116/226 (51%), Gaps = 13/226 (5%) Query: 21 ERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLP--PDRYFTEITVSHRM 78 + R + + + +P+Y+ G+L+AVELL+ T S + P +R+ ++ + Sbjct: 2 DSRLNIAVDCTFICEPVYKRDGKLLAVELLSRFT---TTSFKSPIYTERFLHQLNAQMKE 58 Query: 79 EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHI 138 ++++ Q+ + ++ +F +H ++ S+NID A+ +++ + +P++R E++E Sbjct: 59 KLLRTQLCEVKKQQQWFTKHQIILSINIDFDMANAVLNDEEVILLLSSMPFIRLEIMECF 118 Query: 139 RLPKDST----FASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEG 194 D + + + LWLDDFG+G A+ +A + ++ +KI + + G Sbjct: 119 PNLSDGAENALLSKLAKRYSLWLDDFGSGDAHIAAAASGFFECVKIDKHFYWQWG----G 174 Query: 195 RTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS 240 F L+ + +C+ VI+EGVET +++ + + A QG+ S Sbjct: 175 SATFDNLVGSLRDHCQHVIIEGVETHQQFSQLADRGVDAMQGYLFS 220 >UniRef50_C8QBJ8 Diguanylate phosphodiesterase n=1 Tax=Pantoea sp. At-9b RepID=C8QBJ8_9ENTR Length = 253 Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 17/218 (7%) Query: 29 ERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDR---YFTEITVSHRMEVVKEQI 85 + + +P+Y G+L+A ELLT + P R +F+++ + ++ QI Sbjct: 6 QYTFILEPVYGLSGKLIAWELLTRFADDADIKHERNPAREAGFFSQLPAQEKWQLFLRQI 65 Query: 86 DLLAQKADFFIEHGL--LASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHI--RLP 141 D L + + G + SVNI+ + +L K ++++ LP+ RFE+ R Sbjct: 66 DHLER----LYQKGFQQIISVNINRDIVSSLFSDEKTQQRLDLLPFFRFEISAFFIARFT 121 Query: 142 KDS--TFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFS 199 + + + PLWLDDFG G ++ + +S ++ +KI + F +S +F Sbjct: 122 RADLLILKGLAKIAPLWLDDFGPGYSSLTMMSSGIFECVKIDKAFFWQYGES----HIFD 177 Query: 200 QLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGW 237 LL +N C GVIVEGVE + + + QG+ Sbjct: 178 LLLGHLNDLCSGVIVEGVENQRHIETLAHKAIYGMQGY 215 >UniRef50_D2TBT3 Uncharacterized protein yhjH n=2 Tax=Erwinia pyrifoliae RepID=D2TBT3_ERWPY Length = 272 Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 9/166 (5%) Query: 79 EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHI 138 +++ Q+ + Q+A+FF +HGLL S+ ID A+ + I + + LP++R +L EH Sbjct: 92 DLLLNQLLFIEQQAEFFRQHGLLCSLTIDFQQARAVVESTFIQQILSHLPFIRLKLSEHF 151 Query: 139 RLPKDSTFASMC-----EFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPE 193 D + + LWLDD G+G AN AL ++ +K+ R + + Sbjct: 152 PNLHDGMNNPLLRTLVEQLNILWLDDLGSGCANLHALQSNMFEAVKLERCFY----RENV 207 Query: 194 GRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFL 239 + FS L+ + RY VIVEGV E+ + + +S +A QG+F+ Sbjct: 208 CKPWFSVLIKHIRRYANRVIVEGVADDEQLQTLYSSDIWAVQGYFM 253 >UniRef50_A7MG13 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MG13_ENTS8 Length = 224 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 11/213 (5%) Query: 31 AYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQ 90 + +PI T G+L+ ELLT P L + +TV + E++K+Q++ + Sbjct: 5 TFIAEPIMTTSGQLIGCELLTRFHREDLPV--LNSKYFIMAMTVEGKKELLKQQLEAVEV 62 Query: 91 KADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDST----F 146 A +F ++ L +VN+D I++ +++L ++R E+ E + Sbjct: 63 NAAWFRDNRLFCTVNVDTVQARLCVFDRDIIQLLDKLEFVRLEISEDFEGLEKGIEHPIL 122 Query: 147 ASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLM 205 ++ G L+LDD G+G AN +AL+ Y+ +KI R + Q P + L ++ Sbjct: 123 RTLLNVGYRLFLDDLGSGQANVAALTTGCYEAVKIDRAFYRQEVQKPTFKVLMKNIM--- 179 Query: 206 NRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWF 238 +YC VIVEGVE +E ++++ A QG+ Sbjct: 180 -KYCPYVIVEGVEQRQELPLLRDAGVSAVQGYL 211 >UniRef50_B8IBV5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Methylobacterium RepID=B8IBV5_METNO Length = 665 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 7/136 (5%) Query: 120 ILRQIERLPW-LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSALSEV 173 ILR+ + P L E+ E + + DS T A++ G +WLDDFGTG A S LS + Sbjct: 515 ILREAKVAPHRLAIEITEGLEIETDSAVAETIAALKRLGVQIWLDDFGTGFAGLSCLSRI 574 Query: 174 RYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFA 233 +D +K+ R LFV +P G + ++ L+ + ++VEGVET E+ ++ Sbjct: 575 SFDTVKVDR-LFVQASDTPRGAKMLKDIITLVQNSGQNIVVEGVETGEQVALLKQYGVGL 633 Query: 234 AQGWFLSRPAPIETLN 249 QG++ +RP + L Sbjct: 634 LQGFYFNRPMSADALG 649 >UniRef50_C8QEV2 Diguanylate phosphodiesterase n=1 Tax=Pantoea sp. At-9b RepID=C8QEV2_9ENTR Length = 246 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%) Query: 32 YTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQK 91 + +PI G ++ E+LT + P+ + + +++ + + Q+ + +K Sbjct: 15 FIAEPIINREGGVIGFEVLTRFSSAGTPAYHM------SRMSILAKKNFLLHQLQCIDEK 68 Query: 92 ADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEH-------IRLPKDS 144 DFF LL +VN D L + +I + R P++R E+ E+ I+ P Sbjct: 69 RDFFRNKSLLCTVNADFDMASFLISESEIKLIMMRNPFIRIEISENFPDLDGGIQTP--- 125 Query: 145 TFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHL 204 + + LW+DDFG+G +N A+ + Y++IKI +E F +P ++ +L Sbjct: 126 ILRELYRYYKLWIDDFGSGFSNLKAIQDGIYEFIKIDKEYFWRNYDNPA----WNIVLRD 181 Query: 205 MNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS 240 ++ CR +IVEGVE E++ + F QG F Sbjct: 182 ISMICRYIIVEGVER-EDYLNGLPDIVFGIQGHFFD 216 >UniRef50_C6C3T2 Diguanylate phosphodiesterase n=3 Tax=Dickeya RepID=C6C3T2_DICDC Length = 248 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 23/232 (9%) Query: 32 YTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRME--VVKEQIDLLA 89 Y++ P+Y RLMAVE +V N S L + F T+S R ++KEQ+ +L Sbjct: 13 YSFLPVYGLDARLMAVE---IVNRFHNESNNLSMPQEFLSGTLSQRQRKALLKEQLTILK 69 Query: 90 QKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIR-LPKDSTFAS 148 K+ +FI++ + A + ID + + + LP+L E+ E + + + F+ Sbjct: 70 SKSSWFIDNNINALLKIDYSLAEIFVEDDVLNEDFQSLPFLHLEMNETVSDISRGGDFSY 129 Query: 149 MCEFG---PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLM 205 + + G PLWLD+FG+G N + +K+ L P ++ + +L +M Sbjct: 130 LYKLGHDFPLWLDNFGSGKMNLKPFYDGIIHGVKMDVRFVGKLLARPTSVSIINPMLRVM 189 Query: 206 NRYC--RGVIVEGVETPE--------EWRDVQNS--PAFAAQGWFLSRPAPI 245 R+C V+ +G++ E VQ + PAF+ + L P PI Sbjct: 190 RRHCPDLKVVAKGIDDKSFLEKAFEIEVNAVQGNLWPAFSQET--LDLPLPI 239 >UniRef50_A4BJ14 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BJ14_9GAMM Length = 619 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 11/173 (6%) Query: 86 DLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDST 145 D+L DF+I L + V + P L + P R IE P L+ E+ E + T Sbjct: 445 DILPAHPDFYISVNL-SPVQLRFPGLTSRIMTP---RAIELAPHLKLEVTESQIIESMDT 500 Query: 146 FASMCE------FGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFS 199 F E FG L+LDDFGTG +N L +++++ +KI R + + P+ L Sbjct: 501 FRQNVEAIRELGFG-LFLDDFGTGYSNLGHLQKLQFETLKIDRSFIQNIHERPDQLPLVR 559 Query: 200 QLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 + +L V+VEGVET E ++ QG+F SRP I L T + Sbjct: 560 GITNLAKDLGLKVVVEGVETQAELAALRQLDIANGQGYFWSRPLDIPALKTCL 612 >UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 Tax=Yersinia RepID=A7FEI0_YERP3 Length = 855 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 18/229 (7%) Query: 34 WQPIYQTCG-RLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 +QP Y+T +L+ E L HP+ L PD++ + + + + L A + Sbjct: 623 YQPRYRTDDMQLIGAEALVRWNHPV--LGLLMPDQFIALAEETGLITAISDWTLLQACQD 680 Query: 93 DFFIEHGLLASVNIDGPTLIALRQQPKI--LRQ---IERLPWLRFEL--VEHIRL-PKDS 144 L+ SVNI I R Q I +RQ + LP R EL E I + D Sbjct: 681 AMTWPTSLIVSVNISA---IEFRGQCLIERVRQALLVTGLPSHRLELEITERIMIEDADG 737 Query: 145 TFASMCEFGPLWL----DDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQ 200 M L + DDFGTG ++ + L +D +KI + L +S EG+++ Sbjct: 738 ALKIMTALKTLGIRLSIDDFGTGYSSLNYLHRFPFDGLKIDKSFIDKLTESHEGQSIVEG 797 Query: 201 LLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 +++L + VI EGVET E+ +Q+ QG+FL++P P+E L+ Sbjct: 798 IINLGHAISMTVIAEGVETAEQLTYLQSLHCDEVQGYFLAKPMPVEALS 846 >UniRef50_A6D1N0 GGDEF family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D1N0_9VIBR Length = 629 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 53/88 (60%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG A+FS L ++ +D IKI +E + + + + + ++++ + + V+VEG Sbjct: 521 LDDFGTGYASFSYLRKLPFDCIKIDKEFLSNILHNAQDKAILRSIINIAKKLNKQVVVEG 580 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAP 244 VET E+ R V AQG++ ++P P Sbjct: 581 VETSEQHRFVATESCDVAQGYYYAKPMP 608 >UniRef50_A5VGJ2 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGJ2_SPHWW Length = 710 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 14/219 (6%) Query: 34 WQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 +QPI G ++AVE L +HP++ +PPD + +S + + Q+ L A + Sbjct: 483 YQPIVDAQSGEVVAVEALARWSHPVHGD--VPPDVFIPIAEISGLINAIGRQVLLHACRE 540 Query: 93 DFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPW----LRFELVEHIRLPKDSTFAS 148 E GL +VN+ ++ + +ER + L E+ E + L + A+ Sbjct: 541 --MRETGLDLAVNLSPAQFWDGNLYDEVQQVLERTGFPPERLELEITESLLLRRPQVAAA 598 Query: 149 MCE----FG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLH 203 + + G + LDDFGTG A+ + L ++ D +KI R L P+ R + ++ Sbjct: 599 VIDRLRSLGIRMALDDFGTGFASIAYLQQLTIDRLKIDRSFLAPLESQPDMREVLISIVG 658 Query: 204 LMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 L Y V EG+ETP + + + + QGW RP Sbjct: 659 LAKAYHLEVCAEGIETPGQAQLARIAGCGRLQGWLFGRP 697 >UniRef50_B7KWE1 Diguanylate cyclase/phosphodiesterase n=4 Tax=Methylobacterium extorquens group RepID=B7KWE1_METC4 Length = 667 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 23/227 (10%) Query: 33 TWQPIYQ-TCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRME--------VVKE 83 +QPI + GR+ A E L + + + P+ + I V+ R ++++ Sbjct: 425 VFQPIVDVSSGRIWAAETLMRLKD--TQGRAISPETF---IPVAERTGAILEMGAWILRQ 479 Query: 84 QIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPW-LRFELVEHIRLPK 142 DLLA + + I +++ I P I+ I+R P L E+ E + Sbjct: 480 ACDLLASEPELPIVSVNISARQISEPNFIS--SVEAIVRAAGIAPSRLALEITESGEISG 537 Query: 143 DSTFASMCE----FG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTL 197 + A + + G +WLDDFGTG A + LSE+R+D +KI R FV +P G L Sbjct: 538 NPEVAQLMDRLNTIGIRVWLDDFGTGFAGLTCLSELRFDMVKIDR-FFVQSCDTPRGAKL 596 Query: 198 FSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 ++ L+N + IVEGVE + V + A QG+ L RP P Sbjct: 597 LKNIIDLVNNCAQRPIVEGVEEAWQIDLVSSFGADLFQGYHLGRPMP 643 >UniRef50_B5ERW6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ERW6_ACIF5 Length = 879 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 108/246 (43%), Gaps = 23/246 (9%) Query: 17 ESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEIT-VS 75 ++LQE R L +QP+ + G ++ VE L + HP +PP +F+ + V Sbjct: 505 QALQENRLVL------YYQPVVSSAGAVIGVEALIRLQHP--ERGLIPPAAFFSALDHVR 556 Query: 76 HRMEVVKEQIDLLAQKADFFIEHG--LLASVNIDGPTLIALRQQPKILRQIERLPWLRFE 133 + + +++ +A + E G L SVNI L+ R + + + P LR E Sbjct: 557 LARPIGRFVLNVALHQAALWQEAGHPLRVSVNISTRHLLDARFLEDLQEMLAKYPGLRPE 616 Query: 134 LVEHIRLPKDSTFASMCEFGPLW-----------LDDFGTGMANFSALSEVRYDYIKIAR 182 LVE I + + + M E L LDDFGTG A+ + L + D IKI + Sbjct: 617 LVE-IEITESAPLRDMLEAQRLLVACHRLGVRVALDDFGTGNASLTYLQRLPADSIKIDQ 675 Query: 183 ELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + P+ + + ++ VI EGVET + + + QG+F S+P Sbjct: 676 SFVRDVIDDPKDLAIVTAVITASRMLGMNVIAEGVETADHVDLLVKTGCNHLQGYFFSKP 735 Query: 243 APIETL 248 P E + Sbjct: 736 IPAEDV 741 >UniRef50_B5JRM9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRM9_9GAMM Length = 716 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 45/281 (16%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNP 59 M R V +R+ + ++E F+L +QP + + R+ +E L HP Sbjct: 450 MDRNVERRLDLEQDLRRGIKEDEFYL------VYQPQVDASVNRVTGLEALVRWKHPSKG 503 Query: 60 SQRLPPDRYF-----TEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + L P + T + + ++++ I Q D ++ ++ SVN+ +L Sbjct: 504 T--LAPHHFLELAEETGLILMLGDRLIRQAIKQSKQWLDAGMDPHVVVSVNL------SL 555 Query: 115 RQ--QPKILRQIER------LPWLRF--ELVEHIR-LPKDSTFASMCEFGPLWL----DD 159 RQ Q ++R++ + LP F E+ E I L K A++ F + L DD Sbjct: 556 RQFQQHDLVRRLAQYLEDAQLPSKNFGIEVTESINALDKSLVIAALDNFRQMGLQIALDD 615 Query: 160 FGTGMANFSALSEVRY---DYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 FG G +S+L+ +RY D +K+ R V +SP GR + ++ L N V+ EG Sbjct: 616 FGMG---YSSLNHLRYFPLDALKVDRSFIVQATESPVGRDILQTIIQLGNTLGLKVVAEG 672 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRP----APIETLNTAVL 253 VET E+ + VQ+ A QG++ S P A I+ LN+ L Sbjct: 673 VETDEQHQLVQSMGGAAIQGYYYSPPLEAEAVIDWLNSVTL 713 >UniRef50_B5RJW6 Putative uncharacterized protein n=2 Tax=Klebsiella pneumoniae 342 RepID=B5RJW6_KLEP3 Length = 230 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 21/216 (9%) Query: 32 YTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDR--YFTEITVSHRMEVVKEQIDLLA 89 + +P ++ G + + E+LT + + L + FT ++ +++V ++QI L Sbjct: 13 FVLEPSFKKDGSIHSWEILTKNVKKKDCNDYLANESGFCFTSLSDKEKIDVFQKQI-LTI 71 Query: 90 QKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASM 149 +K D S+N+D + I ++ + FE+ EH F + Sbjct: 72 EKLDASELKFKPVSLNVDSLISDCILNDKYIGDYLKNQKNIAFEINEHFH-----EFNTK 126 Query: 150 C---------EFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQ 200 C + P+WLDDFG+G+ + + + ++ IKI ++ F ++ E F + Sbjct: 127 CCMVDLKCLSKLCPVWLDDFGSGLTSLTVIDMFDFECIKIDKDYFWEIQSESE----FFK 182 Query: 201 LLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQG 236 ++ + YC VIVEGVET E+ V + A QG Sbjct: 183 RINKIKSYCNFVIVEGVETIEQKNKVHSVVDCACQG 218 >UniRef50_Q163Y3 GGDEF/EAL domain protein n=2 Tax=Roseobacter RepID=Q163Y3_ROSDO Length = 681 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 26/234 (11%) Query: 34 WQP-IYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFT---EITVSHRME--VVKEQIDL 87 +QP +Y G + E+L HP +PP + E + H+++ +V++ +D Sbjct: 440 FQPQVYTETGEIYGCEVLARWRHP--ERGIVPPATFIAAAEEAGMIHQIDQIMVEKGLDA 497 Query: 88 LAQKADFFIEHGL---LASVNIDGPTLIALRQQPKILRQIE--RLP--WLRFELVEHIRL 140 L + F E G+ SVN PTL ++L+ + LP L E++E + Sbjct: 498 L----EVFREMGVHVPAISVNASPPTLRDPHLTDRLLQAVRARHLPPSVLTVEVLESTLI 553 Query: 141 PKDSTFA-----SMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEG 194 D A ++ + G + LDDFGTG A+ S LS +R D IK+ + L V+ P Sbjct: 554 ENDDDMALLTIENLSKAGFSVVLDDFGTGYASMSNLSRLRLDGIKLDQSL-VLPVPEPRA 612 Query: 195 RTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 ++ S L+ L + V+ EGVETP ++ V+ QG+ + RP P E Sbjct: 613 DSIISALVTLSSNLNMRVVAEGVETPAHFKTVRRLGCDVVQGFGIGRPMPKEAF 666 >UniRef50_C0BZZ6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZZ6_9CLOT Length = 637 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 15/143 (10%) Query: 116 QQPKILRQIERL--PW------LRFELVEHIRLPKDST-----FASMCEFG-PLWLDDFG 161 ++P + R+I+RL W ++FE+ E + + +D+ M EFG +LDDFG Sbjct: 487 EEPDLPRRIQRLLGAWDIAPQKIKFEITERV-ISEDAVQVQKVIHEMEEFGFRFYLDDFG 545 Query: 162 TGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPE 221 G +NF++++E ++ IK+ + L + ++ +G + L+ L + VI EGVET Sbjct: 546 IGYSNFASVAEYHFESIKLDKSLVGITEKAEKGYNIVCGLISLFHEMGMEVIAEGVETAG 605 Query: 222 EWRDVQNSPAFAAQGWFLSRPAP 244 + + + A QG++ +RP P Sbjct: 606 QSETLTSMGADKIQGFYYARPMP 628 >UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z8Q2_PHOPR Length = 517 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 29/234 (12%) Query: 34 WQPIYQT-CGRLMAVELLTVVTHP----LNPSQRL---PPDRYFTEITVSHRMEVVKEQI 85 +QPI + G + ELL HP ++P++ + IT+ V E+ Sbjct: 261 YQPIVNSKSGHWIGAELLVRWLHPKHGVISPAEFIHTAESTGLINTITLHLLERVAYEKT 320 Query: 86 DLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDST 145 + A+ D +I S+N+ +I R +++ I + P L+ +V + T Sbjct: 321 QIQAENDDLYI------SINVTASMIINSRYVTELICIISKYPSLQHNVV--FEFTERET 372 Query: 146 FA------------SMCEFGPLW-LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSP 192 F+ + E G W LDDFGTG A S L +R+D +KI R Sbjct: 373 FSPTELVELKLGMQRLREVGIKWALDDFGTGYAGLSTLQSLRFDILKIDRTFVASSVTDA 432 Query: 193 EGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 ++ + + + ++ EGVET E+ V + A+QG+F ++P P + Sbjct: 433 VTHSILDNIAEMGHTLHCTMVAEGVETAEQAEYVDDLGIEASQGYFYAKPMPFD 486 >UniRef50_B0U8W3 Diguanylate cyclase/phosphodiesterase n=7 Tax=Methylobacterium RepID=B0U8W3_METS4 Length = 669 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 29/241 (12%) Query: 26 LQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQ 84 L+ E +QP+Y G + VE L PL + +PP R+ I V+ R ++ Sbjct: 424 LEAELELHYQPVYDLASGSVRTVEALARWRSPLLGA--VPPSRF---IPVAERCGLIHRL 478 Query: 85 IDLLAQKADFFIEH-----GL---LASVNIDGP----TLIALRQQPKILRQIERLPWLRF 132 LL +KA I+H GL L+S ++ P ++AL ILR L F Sbjct: 479 TLLLLEKALGEIDHLPQAVGLSFNLSSHDLSSPEATDAIVAL-----ILRSGVAPSRLTF 533 Query: 133 ELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFVM 187 EL E + + + G + LDDFGTG ++ + + D IKI R FV Sbjct: 534 ELTETALMADLEAAGRSVGKLRALGSRIALDDFGTGHSSLGYVHRLGLDRIKIDRS-FVA 592 Query: 188 LRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIET 247 +P G + +LHL + EGVET E+ ++ QG+ L +PAP+ Sbjct: 593 SVDTPTGEAIVKTILHLCTYLGLECVAEGVETEEQLDRLRGFGCRLVQGYLLGKPAPLRE 652 Query: 248 L 248 L Sbjct: 653 L 653 >UniRef50_B5JXV5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXV5_9GAMM Length = 646 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 20/256 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHP--- 56 M ++ + RI + L+ R F+ + + PI G ++ E L HP Sbjct: 372 MHQEAVNRIELENSIRHGLERREFFNR------YHPIIDVESGLTVSAEALVRWNHPERG 425 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L P+ +P + + + K DL K F GL +VN Sbjct: 426 ELAPNHFIPLAEEIGLVKPLDQQVLDKALADLCVWKKHFPEHSGLTVNVNHSAQHFHGRP 485 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 IL +E R L+ EL E L D + F + + G L +DDFGTG ++ Sbjct: 486 SLEVILNSLEAHSLRGRDLKLELTESSILKNDLVASALFGELRKMGVHLCMDDFGTGFSS 545 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ +D +KI + S E R + ++ + N GV EGVET E+ + Sbjct: 546 LSYLHKLSFDMLKIDMSFVAEMLYSDEARKIVHSIIEMGNHLGLGVTAEGVETQEQLDIL 605 Query: 227 QNSPAFAAQGWFLSRP 242 ++ AQG+ S+P Sbjct: 606 KSMGCRYAQGYLFSKP 621 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 31/236 (13%) Query: 34 WQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 +QP T G+++ E L HP +PP F I ++ M ++ E D + ++A Sbjct: 516 YQPQVDTRSGKVVGAEALLRWMHP--EQGLIPP---FKFIPLAEEMGLIGEMGDWVIREA 570 Query: 93 ----DFFIEHGL---LASVNIDGPTLIALRQQPKILRQIERL--------PWLRFELVEH 137 F + G+ +VN+ AL+ P R+++ + L EL E Sbjct: 571 CKQVQTFAKKGVSLPKVAVNVS-----ALQFTPSFTRRVKSILDELAVDPATLELELTEG 625 Query: 138 IRLPKDST----FASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSP 192 + + + A + + G L +DDFGTG ++ S LS D +KI R + S Sbjct: 626 VVMGDTNASVQALAELKDLGVSLSIDDFGTGYSSLSYLSRFPLDELKIDRSFVIEANNSE 685 Query: 193 EGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 +G +L ++ + ++ EGVET E++ + + A QG+ S+P P E L Sbjct: 686 QGASLVRAIIAMAQSLGLELVAEGVETDEQYEFMTTAGAHVIQGYMFSQPVPAEKL 741 >UniRef50_C3K5S5 Putative EAL domain signaling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5S5_PSEFS Length = 709 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 +++DDFGTG + S L + D+IKI R FV+ + P+G + + +L GV+V Sbjct: 604 VYIDDFGTGFSALSYLHQFPVDFIKIDRS-FVVAQHDPKGAQVMTGMLRFCEALNLGVVV 662 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 EGVET E+ + QGW+ S+ P + L V Sbjct: 663 EGVETAEQLAFLNTGADLIIQGWYFSKALPDDQLQGFV 700 >UniRef50_A9CEW9 GGDEF family protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CEW9_AGRT5 Length = 772 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 13/231 (5%) Query: 34 WQPIYQ-TCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 +QP+ GR++A E L H + + PDR+ T ++ ++ + E + A Sbjct: 518 YQPVVNLQSGRIVAYEALARWRH--SKLGLITPDRFITLAEENNFIKPLGEWVLAQACMD 575 Query: 93 DFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPW----LRFELVEHIRLPKDSTFAS 148 + +VN+ L P + R +E+ + L E+ E L +DS+ + Sbjct: 576 AMTWPKDIRLAVNLSAVQLSNDDIVPVVDRALEKSGFPAERLELEVTETAMLERDSSTKA 635 Query: 149 MC---EFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHL 204 + E G L LDDFGTG A S L+ V +D IKI RE L +P + + ++ + Sbjct: 636 LKLLKERGVRLALDDFGTGYAGLSTLTHVAFDKIKIDREFVSGLPTNPMCSAIVNTIIDM 695 Query: 205 MNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL--NTAVL 253 + V EGVE ++ ++ S AQG++ + PAP+ + N AV+ Sbjct: 696 AEQIGLKVTAEGVENRDQVEALKLSGCDEAQGYYFAEPAPLARIFKNRAVI 746 >UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6D2_PELCD Length = 976 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 26/248 (10%) Query: 17 ESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNPSQRLPPDRYFTEITVS 75 ++LQE + L +QPI+Q + ++ +E L HP LPPDR+ S Sbjct: 713 QALQEDQLELH------YQPIWQLTEKCIVGLEALVRWRHP--QKGLLPPDRFIPIAEES 764 Query: 76 HRMEVVKEQI------DLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIER--L 127 + ++ + + + D+ + + F L SVNI L + R ++ L Sbjct: 765 NLIQALGQWVLNAACRDMRSWRNQGF--ESLPVSVNISARQLFHDDFTSSLARLLKEYAL 822 Query: 128 P--WLRFELVEHIRLPKDSTFASMCEF-----GPLWLDDFGTGMANFSALSEVRYDYIKI 180 P L E+ E I L KD+T + L LDDFGTG ++ S L+ D +KI Sbjct: 823 PPEQLELEVTETIFLQKDTTVEKVMNHLKNIGVGLVLDDFGTGYSSLSYLNRFHIDKLKI 882 Query: 181 ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS 240 R + Q + L + ++ + V+ EGVET + + AQG+F Sbjct: 883 DRSFMAHICQKEQDAILTATIIRMAQSLGMQVVAEGVETAGQELFLMEQGCDLAQGYFYY 942 Query: 241 RPAPIETL 248 +P PIE+L Sbjct: 943 KPQPIESL 950 >UniRef50_Q21XF0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21XF0_RHOFD Length = 879 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 54/101 (53%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ S LS++ D +KI R + + +PE L S ++ L + V+ Sbjct: 775 LAIDDFGTGFSSLSYLSKLPVDTLKIDRSFVIEMTDAPESLALVSTIISLAHALKLKVVA 834 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 EGVET E+ R +Q QG+ S+P P + LAL Sbjct: 835 EGVETEEQSRLLQVLNCDEIQGFLFSKPVPSDIFEAKYLAL 875 >UniRef50_B2JTL4 Diguanylate phosphodiesterase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JTL4_BURP8 Length = 310 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 4/95 (4%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLF-SQLLHLMNRYCRGVI 213 L LDDFGTG +NF L++ R+DY+K+ R M E R+ F + L++ + V+ Sbjct: 209 LSLDDFGTGFSNFDLLADFRFDYVKVDRRFLAM---RGEARSQFLKSVAALVHTHGAKVV 265 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 VEGVE E +Q+S AQG++ +P ++ L Sbjct: 266 VEGVENAAEHDVLQHSGIDLAQGYWFGKPMAVDQL 300 >UniRef50_C3LLQ7 EAL family protein n=37 Tax=Vibrio RepID=C3LLQ7_VIBCM Length = 704 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 11/147 (7%) Query: 103 SVNIDGPTLIALR---QQPKILRQIERLPWLRFELVEHIRLPKDS----TFASMCEFG-P 154 S+N+ TL+ L Q +I+R + L + EL E L + F + + G Sbjct: 536 SINLTAETLMDLTVMAQIEEIIRSVAGL--IHIELTEESLLADEQRLTWVFNQLHQLGVK 593 Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 +++DDFGTG ++ S L D IKI R FV+ S +GR +F+ L + + I+ Sbjct: 594 IYIDDFGTGYSSLSYLHRFDVDGIKIDRS-FVLALVSEKGRKVFANLQLVAHSLELETII 652 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSR 241 EGVET E+ + + F+ QGWF S+ Sbjct: 653 EGVETQEQLDAMGDEYPFSVQGWFYSK 679 >UniRef50_C4UWQ5 EAL domain n=6 Tax=Yersinia RepID=C4UWQ5_YERRO Length = 151 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 8/132 (6%) Query: 113 ALRQQPKILRQIERLPWLRFELVEHI----RLPKDSTFASMCEFGPLWLDDFGTGMANFS 168 A+ K++ ++ +P++R E++E K+ + + + LWLDDFG+G N + Sbjct: 4 AVLYDEKVIALLDSMPFIRLEIMESFPNLSEGAKNPLLSKLAKRYSLWLDDFGSGNTNIA 63 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 A + ++ IKI + + EG F+ L+ + +C+ V+VEGVET +++ + + Sbjct: 64 AAASGFFECIKIDKNFYWQW----EGSVTFNNLVMRLRDHCQNVVVEGVETHQQFSQLAD 119 Query: 229 SPAFAAQGWFLS 240 A QG+ S Sbjct: 120 MGVDAMQGYLFS 131 >UniRef50_A6W9D1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W9D1_KINRD Length = 692 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 52/98 (53%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L LDDFGTG ++ S L E+ +D +K+ R + +S R L +L+L V+ Sbjct: 579 LLLDDFGTGYSSLSQLQELPFDVVKVDRSFVAGMTRSARDRALVLAVLNLAEALGMAVVA 638 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 EGVE E+ ++ + AAQGW+ +R P L A+ Sbjct: 639 EGVEEREQAEQLRVAGCSAAQGWYFARAVPAAELPAAL 676 >UniRef50_A6W5N9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W5N9_KINRD Length = 508 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 7/163 (4%) Query: 100 LLASVNIDGPTLIALRQQPKILRQIERLPW--LRFELVEHIRLPKD----STFASMCEFG 153 L+ +VN+ P L + +ERL L EL E++ + +D + ++ E G Sbjct: 317 LVVAVNVSAPQLRDPALPAAVRGAVERLEGRPLVLELTENVLVAEDPGTEAALDALVEAG 376 Query: 154 P-LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGV 212 L +DDFGTG A + L + KI R + P R L L+ L + G+ Sbjct: 377 AHLTVDDFGTGYATLAYLRRRPFTAFKIDRSYVRDIESDPRTRALVEGLVLLASATGLGL 436 Query: 213 IVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 +VEGVET + R ++ A QG+ +RPAP+E + AL Sbjct: 437 VVEGVETEGQARLLEGMGAPTHQGFLHARPAPLEQACEVIAAL 479 >UniRef50_B9JV65 GGDEF family protein n=20 Tax=Rhizobiales RepID=B9JV65_AGRVS Length = 674 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 6/124 (4%) Query: 132 FELVEHIRLPKDSTF----ASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFV 186 FE+ E I + + S + G +WLDDFGTG A S L +D +KI R F+ Sbjct: 528 FEITEGINMDRQSDILRCIKDLENMGIRIWLDDFGTGFAGLSWLRLFNFDTVKIDRS-FL 586 Query: 187 MLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 +P+GR++ ++ L+ ++VEG+ET E+ ++ QG+++ RPA ++ Sbjct: 587 HDSDTPKGRSMLRDIIALVRNRGHRILVEGIETEEQLELMRQFDIDHVQGFYIGRPATLD 646 Query: 247 TLNT 250 + Sbjct: 647 VFKS 650 >UniRef50_C9P447 Putative uncharacterized protein n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P447_VIBME Length = 826 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 55/97 (56%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + +DDFGTG ++F+ LS+ +DY+KI RE ++ + + ++ L + V+ Sbjct: 574 IAIDDFGTGYSSFTYLSDCHFDYLKIDREFVTDIQLGSNKCKIVNMIIGLCHSLGIKVVA 633 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTA 251 EGVET +E +++ QG+F S+P P +L+ A Sbjct: 634 EGVETEQEVMVLKSLGVDYMQGYFFSKPLPFTSLHQA 670 >UniRef50_C9PH57 Putative signaling membrane protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PH57_VIBFU Length = 482 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 25/187 (13%) Query: 81 VKEQIDLLAQKADFFIEHGL--LASVNIDGPTLIALR--------QQPKILRQIERLPW- 129 + E++ L Q A F +E + +A + + P L AL Q P L +++L Sbjct: 283 IAEKLSLYPQLAYFIVERSISEMAPIMREHPDL-ALGINITAFELQDPHFLPYLDKLTTE 341 Query: 130 -------LRFELVEHIRLP----KDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYI 178 ++ E+ E I LP D + + + LDDFGTG+AN L+E+ +DYI Sbjct: 342 YGIPNAKIKIEITERIDLPLLELADFSRDAKAMGFVVVLDDFGTGVANLVWLTEMDFDYI 401 Query: 179 KIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ-NSPAFAAQGW 237 K+ R +FV R + ++ L+ + VI EGVET E+ ++ N P + QGW Sbjct: 402 KVDR-VFVNALNYDIKRNIVRPVMELLTNLNKQVIFEGVETEHEFNIIKDNYPDASIQGW 460 Query: 238 FLSRPAP 244 + + P Sbjct: 461 YFYKSLP 467 >UniRef50_Q21RH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=6 Tax=Proteobacteria RepID=Q21RH2_RHOFD Length = 1135 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 51/93 (54%) Query: 154 PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVI 213 PL++DDFGTG ++ S L ++ +YIKI + + S + + + L+ R + Sbjct: 1011 PLYIDDFGTGYSSLSYLQKLPVEYIKIDQSFVRDMTISRDSSLIVRSTIDLVRDLGRKTV 1070 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 EG+ET E+W + AQG+F++RP P E Sbjct: 1071 AEGIETQEQWDQLAACGCDIAQGYFIARPMPAE 1103 >UniRef50_A4BEY1 GGDEF domain/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BEY1_9GAMM Length = 653 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 7/132 (5%) Query: 121 LRQIERLPWLRFELVEHIRLPK-DSTF----ASMCEFG-PLWLDDFGTGMANFSALSEVR 174 +R E +L EL EH RLP D F S+ +FG L LDDFGTG AN S L + Sbjct: 509 VRHPEVFQYLELELTEH-RLPDHDEAFLEHLKSIRDFGIRLALDDFGTGYANLSRLPDWP 567 Query: 175 YDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAA 234 + +K+ R + L +S + + + ++ L + V+ EGVET E V Sbjct: 568 FQILKLDRSFILDLPESDKQQAVVKSIIDLCSTLGIQVVAEGVETEAELTIVDQLGCHCI 627 Query: 235 QGWFLSRPAPIE 246 QG+ +RP P+E Sbjct: 628 QGYVYARPKPLE 639 >UniRef50_C9NRD6 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NRD6_9VIBR Length = 829 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 9/181 (4%) Query: 80 VVKEQIDLLAQKADFFIEH-GLLASVNIDGPTLIA--LRQQPKILRQIERLP-WLRFELV 135 V ++ + +L + F +H GL + + + IA LR +++ Q P L E Sbjct: 490 VNRKAMSVLPELQQLFGDHVGLSVNRSFNTKQDIAEILRHSAQLIDQSGIKPDMLTIEFT 549 Query: 136 EHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQ 190 E DS A++ + G + +DDFGTG A+F L++ +D +KI R +R Sbjct: 550 ESAYFDGDSYQEQLLAAIRKAGVSIAVDDFGTGCASFDYLNKSYFDVLKIDRSFVQGIRF 609 Query: 191 SPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 + + + ++ L + V+ EGVET +E+ +++ QG+F S+P PIE L Sbjct: 610 ASRQYHVVNTIIQLAQKLKLKVVAEGVETRDEYLTLRSLGVDCIQGYFFSKPLPIEALRV 669 Query: 251 A 251 A Sbjct: 670 A 670 >UniRef50_Q0G035 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G035_9RHIZ Length = 615 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 +WLDDFG G A S L +V +D +KI F+ R + +++ S L+ L+ ++V Sbjct: 512 IWLDDFGAGYAGLSWLQKVEFDVVKIDNS-FLGERMTARDKSMLSDLVRLIRHRGHEIVV 570 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRP 242 EGVETP + +++ AQG++L RP Sbjct: 571 EGVETPRQLEMLRSFDVHYAQGFYLGRP 598 >UniRef50_C6AZK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobium RepID=C6AZK7_RHILS Length = 763 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 20/215 (9%) Query: 44 LMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA----DFFIEHG 99 + VE L HP++ L PDR+ + ++ ++VV L+ ++A +++ G Sbjct: 518 VAGVETLARWQHPVHGL--LTPDRF---LDIAEDLDVVSTIDALILERAIADRKVWLKDG 572 Query: 100 L---LASVNIDGPTLIALRQQPKILRQIERLPW-LRFELVEHIRLPK--DSTFASMCEFG 153 L SVN+ L A K LR ++ P FEL+E I L ++ A++ + Sbjct: 573 LPIPKISVNVSARRL-ADPDLGKKLRALKIEPGTFSFELLESISLDDCDEAVVANLKKLR 631 Query: 154 PLWLD----DFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYC 209 L +D DFGTG A+ +L + +KI REL ML QS E R L ++ + Sbjct: 632 KLGIDIQIDDFGTGHASIVSLLRLSPKTLKIDRELIRMLPQSAEQRKLVGSIIDIGRSLN 691 Query: 210 RGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 VI EGVET E R ++ QG+ L+RP P Sbjct: 692 ILVIAEGVETAEHIRILEELDCDTLQGYALARPMP 726 >UniRef50_B0UKA4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Methylobacterium RepID=B0UKA4_METS4 Length = 884 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 49/91 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG +N + L+ D +K+ R L + +PE +T+ +L L +VEG Sbjct: 767 IDDFGTGYSNLATLARAPIDALKLDRSLVDGVAGNPEQQTIVRTILSLAGSLGFETVVEG 826 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIET 247 VET + R + A AQG+ S P PIET Sbjct: 827 VETDADLRFLVEGGATTAQGYLFSPPVPIET 857 >UniRef50_Q98JQ6 Mlr1828 protein n=1 Tax=Mesorhizobium loti RepID=Q98JQ6_RHILO Length = 614 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%) Query: 130 LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L E+ E + L + +T S+ + G + +DDFGTG ++ S L ++ IKI R Sbjct: 479 LELEITESVLLANNENTLNTLYSLRDLGISIAMDDFGTGYSSLSYLRSFPFNRIKIDRSF 538 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 ++ +S E R + + L EGVET +++R V+ + QGW+ RP P Sbjct: 539 VSLMCESSESRAIVKAVAELGTTLGMTTTAEGVETEDQYRLVKENGCTDVQGWYFGRPMP 598 Query: 245 IETLNT 250 L+T Sbjct: 599 ASELHT 604 >UniRef50_A0KH60 Sensory box/GGDEF family protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KH60_AERHH Length = 738 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 18/178 (10%) Query: 86 DLLAQ-KADFFIEHGLLASVNIDGPTLIALRQQPKILRQI-------ERLP--WLRFELV 135 +L+ Q A+F + G +VNI +I ++R I +LP L E+ Sbjct: 539 ELMVQCAANFILTSGYPVTVNISPSQIIF---NGGMIRNIMEKVIIEYKLPRNTLNLEVT 595 Query: 136 EHIRLPKDSTF----ASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQ 190 E + + + S F + E G ++LDDFGTG A FS LS +D IKI R L + + Sbjct: 596 ESVPIVEQSVFINAIGQIKELGVEVYLDDFGTGYAFFSTLSMGAFDAIKIDRNLVSGINK 655 Query: 191 SPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 S + L + +L N VI EGVE +E ++N QG++ S+P +T+ Sbjct: 656 SLSMQRLLNSILTYANEAGMYVIAEGVEEEDELWVLKNLGVKYVQGYYFSKPMREDTM 713 >UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT05_CHRVO Length = 825 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 98/241 (40%), Gaps = 44/241 (18%) Query: 34 WQPIYQ-TCGRLMAVELLTVVTHP----LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLL 88 +QPI +CGR+ E L HP +NP+ +P + E+ L+ Sbjct: 575 FQPIVDLSCGRIRKAEALLRWHHPQHGVINPAVFIP----------------IAEECGLI 618 Query: 89 A--------QKADF------FIEHGLLASVNIDGPTLIALRQQPKILRQIER--LPW--L 130 A Q DF + L ++N+ LR + L ++ R +P L Sbjct: 619 AKICEWVYDQALDFIRAWRDMLRDDLRIAINVSALHFRDLRNPVRWLDKLTRAGVPGEAL 678 Query: 131 RFELVEHIRLPKDSTFASMCEFG-----PLWLDDFGTGMANFSALSEVRYDYIKIARELF 185 E+ E + L D + + LDDFGTG + S L R DY+KI + Sbjct: 679 MLEITESLLLDADHKVQEALDLYRAAGIQIALDDFGTGYSALSYLKRYRLDYLKIDQAFV 738 Query: 186 VMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPI 245 + + P L ++ + ++ VI EGVETP + +Q AQG+ SRP P Sbjct: 739 GQIAEEPRDHALCEAIVVMAHKLGLNVIAEGVETPAQAAILQACRCEHAQGFLYSRPLPA 798 Query: 246 E 246 E Sbjct: 799 E 799 >UniRef50_B7K503 Diguanylate cyclase/phosphodiesterase n=5 Tax=Chroococcales RepID=B7K503_CYAP8 Length = 617 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 13/158 (8%) Query: 100 LLASVNIDG-----PTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFA-----SM 149 +L SVN+ P LI L +Q +L + WL E+ E L KDS A ++ Sbjct: 442 ILMSVNLSTEQFYHPQLIKLIKQV-LLATGLKSRWLELEITETTIL-KDSQKAYRILKAL 499 Query: 150 CEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRY 208 G L LDDFG G S LS+ + +KI + L+++PE + S L+ L ++ Sbjct: 500 QHLGVSLCLDDFGKGYGAISYLSDSPFQKLKIDLSVIQKLKENPENTMMISALIALAEKF 559 Query: 209 CRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 V+ EGVET ++ + A QG+ SRP P+E Sbjct: 560 QMRVVAEGVETQQQLDVLYTLQCDAIQGYRFSRPLPVE 597 >UniRef50_A4BIV5 GGDEF family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIV5_9GAMM Length = 643 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 50/93 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG ++ + +++ D +KI R + +P + ++ L + +I+EG Sbjct: 528 LDDFGTGHSSLEYIRDLKIDRLKIDRSFVTGIDTNPRNYDFMASMVKLTHLLNMDIIIEG 587 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 VET E+W+ + + QG+FL RP P L+ Sbjct: 588 VETLEQWQALSSMGDVFVQGYFLHRPMPFADLD 620 >UniRef50_C4L760 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L760_TOLAT Length = 808 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 21/231 (9%) Query: 33 TWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHR-MEVVKEQIDLLAQ 90 +QP Y G ++ E L HP +PPDR+ VS + M++ +D Q Sbjct: 573 VYQPQYDIHSGHIVGAEALLRWRHP--SYGMVPPDRFIPIAEVSGQIMDIDLWVLDQACQ 630 Query: 91 KADFFIEHGLLA---SVNIDGPTLIALRQQPKILRQI---ERLPWLRF--ELVEHIRLPK 142 G+ +VN G T ++ P +R +P RF E+ E + Sbjct: 631 CLGKLTAKGITDFRLAVNASG-TELSNPAYPDAVRSTLLRYDIPPHRFGIEITETAIVEL 689 Query: 143 DS----TFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTL 197 D T ++ E G + LDDFGTG + S L+ ++ D +KI R + L +P+ L Sbjct: 690 DEVAQMTVRALKEIGVEIELDDFGTGYTSLSHLTNLQLDVLKIDRSYIMQLESNPK---L 746 Query: 198 FSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 +L L + + VI EGVET E+ + +Q AQG+ LS+P E L Sbjct: 747 VDSILQLADAFSLRVIAEGVETIEQLKLLQQKRCHMAQGFLLSKPITEEEL 797 >UniRef50_B8K8F7 FOG: EAL domain protein n=2 Tax=Vibrio RepID=B8K8F7_VIBPA Length = 685 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 17/196 (8%) Query: 64 PPD--RYFTEITVSHRME--VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 PP YF ++ ++ ++ V+K+ L + D S+N+ T + Sbjct: 480 PPTFLSYFNKLGLTSELDLWVIKQA---LYEVCDLASNPNFKVSINVSPETFLVNGFAAS 536 Query: 120 ILRQIER----LPWLRFELVEHI----RLPKDSTFASMCEFG-PLWLDDFGTGMANFSAL 170 + + IE+ + FE+ E + L S S+ E G + LDDFG+G ++ L Sbjct: 537 VSKLIEQSDVDFTQVEFEITEELLIQDELATSSVLKSLRELGIQIALDDFGSGYSSIGYL 596 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 + +D +KI R L V L Q +GR LF L+ +VEGVET +E V Sbjct: 597 CKYEFDKVKIDRSLVVNLTQE-KGRELFRLTTELVRATGAKTVVEGVETEQELDFVTQQG 655 Query: 231 AFAAQGWFLSRPAPIE 246 QG++ +P P+E Sbjct: 656 ISLIQGYYFYKPMPLE 671 >UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KCF3_PSEFS Length = 857 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 34/238 (14%) Query: 34 WQPIYQTC-GRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 +QP Y+ G+++ E L HP+ + PD + + E+ L+ + Sbjct: 623 FQPRYRIADGQMVGAEALVRWQHPVRG--LIAPDTFIP----------IAEESGLILALS 670 Query: 93 DFFIEHGLLASVNIDGPTLIALRQQPKILRQ---IERL-----------PWLRFELVEHI 138 D+ +E + + P +++ P ++ +ER + E+ E + Sbjct: 671 DWVLETACVCAAQWPEPLFVSVNLSPTEFKRGNLVERTQQALKSSGIDPARVELEITESV 730 Query: 139 RLPKDSTFA-----SMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSP 192 L +D+T A ++ + G + +DDFGTG ++ S L + +D +KI R L +S Sbjct: 731 ML-EDATGALEVMRTLKQLGVRIAMDDFGTGYSSLSYLRDFPFDGLKIDRSFLTRLEESD 789 Query: 193 EGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 + + + ++ L V EG+ET E ++ QG+FLSRP IE LN+ Sbjct: 790 DDKAIIQAIVGLGRTLALTVTAEGIETAEHLALLKAVACEEGQGYFLSRPLDIEALNS 847 >UniRef50_B6AQB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Leptospirillum sp. Group II RepID=B6AQB4_9BACT Length = 878 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 5/134 (3%) Query: 122 RQIERLPWLRFELVEHIRLPKDSTFAS----MCEFG-PLWLDDFGTGMANFSALSEVRYD 176 R E WL FEL E + + T + E G + +DDFGTG ++ S LS D Sbjct: 736 RHAELTRWLTFELTETVLMRDPETAGEQLSWLKELGIRIAIDDFGTGYSSLSYLSRFPVD 795 Query: 177 YIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQG 236 IK+++E + + +SP L ++ + ++ EG ET EE R ++ QG Sbjct: 796 EIKVSQEFVMRMAKSPRDLKLVKTIIQMGKSLRLNLVGEGAETEEEVRMLEGLGCHVIQG 855 Query: 237 WFLSRPAPIETLNT 250 + LSRP P+ + + Sbjct: 856 FALSRPLPVSEMES 869 >UniRef50_B2VEL6 Putative uncharacterized protein ydiV n=1 Tax=Erwinia tasmaniensis RepID=B2VEL6_ERWT9 Length = 246 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/222 (22%), Positives = 103/222 (46%), Gaps = 26/222 (11%) Query: 36 PIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFF 95 PIY G+LM+VE+LT TH + +P + ++ R+ +++++I+++A+ DFF Sbjct: 17 PIYAPDGQLMSVEMLTHFTHAA-ANVSIPQEILTPQLNDQQRLRLMQDKINIIARHHDFF 75 Query: 96 IEHGLLASVNIDGPTLIALRQQPKILRQI-----------ERLPWLRFELVEHIRLPKDS 144 I+H + ++NID + + +L+++ E P L+ H L Sbjct: 76 IQHNVNVAINIDIALAKTILESDLLLKKMRLLNCVELGISENFPGLKAGDANHYLLGLRE 135 Query: 145 TFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHL 204 F+ L L+++G G A A+ + + IK+ + + + +L Sbjct: 136 GFS-------LSLNNYGAGQATSKAIFDDLFYRIKLDKSFIHRGIRRLSFQPFIGAILEH 188 Query: 205 MNRYCRGVIVEGVETPEEWRDVQNSPAFAAQG----WFLSRP 242 + +C+ V+V+G++ + D+Q FA G F++ P Sbjct: 189 IKPHCQEVVVQGIDN---FADLQTVRPFAFDGIQGAIFINEP 227 >UniRef50_C1D6L1 EAL domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6L1_LARHH Length = 197 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 8/117 (6%) Query: 144 STFASMCEFGP--------LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGR 195 S F MC F + +DDFG+G ++ + L + D +KI +E + + Sbjct: 73 SDFDIMCRFARQFQEHGFLVAMDDFGSGYSSLNMLKNMPIDILKIDKEFLSSSADNTKRD 132 Query: 196 TLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 +F+ + + N ++VEGVET ++ +Q S AQG++ SRP P + ++A+ Sbjct: 133 IIFTGIAKMANSLGLSIVVEGVETADDVELMQKSGCHIAQGYYFSRPIPEDAFSSAL 189 >UniRef50_A0NV57 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=2 Tax=Labrenzia RepID=A0NV57_9RHOB Length = 1049 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 51/88 (57%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG A+ S +S++ + +KI R + Q + + +QL+HL GV+ EG Sbjct: 943 LDDFGTGYASLSHVSDLPINGLKIDRSFTRQMLQDAKKEVIVNQLIHLARSLNIGVVCEG 1002 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAP 244 VET ++ ++ F+ QG+ ++RP P Sbjct: 1003 VETDAQYDRLRMMGDFSIQGYLIARPMP 1030 >UniRef50_B3IA09 Putative cyclic diguanylate phosphodiesterase n=1 Tax=Escherichia coli E22 RepID=B3IA09_ECOLX Length = 265 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 110/255 (43%), Gaps = 45/255 (17%) Query: 29 ERAYT--WQPIYQTCGRLMAVELLTVVTHPLN----PSQRLPPDR------YFTEITVSH 76 E+ +T +QP+ G L VE+L+ TH + PS +P R FT + Sbjct: 19 EKQFTPYFQPLVTQEGSLCGVEILSRWTHSVYNIIPPSLYMPAIREAGLSEKFTLCMMGQ 78 Query: 77 RMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQ---PKILRQIERLPWLRF- 132 + ++ + L+ K DFFI S N+D Q+ ++L + P +RF Sbjct: 79 IHKAMEPYLSLM--KDDFFI------SFNLDSSACTPALQRFIFNEMLPSFDSAP-VRFI 129 Query: 133 -ELVEH------------IRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIK 179 EL EH I+ KD+ L +DDFGTG AN L ++R D IK Sbjct: 130 CELTEHESWLNHSEKLRLIKQFKDNGVQ-------LAIDDFGTGFANLDLLEKIRPDLIK 182 Query: 180 IARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFL 239 I + + E + LH+ R V+ EGVET +W +++ QG++ Sbjct: 183 IDASFVSRMTEDKETWIVPEIALHIAQRLGIQVLAEGVETKWQWEWLKSRNVMFFQGYYF 242 Query: 240 SRPAPIETLNTAVLA 254 S P E L + +++ Sbjct: 243 SSPVAREQLPSMLIS 257 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 112/271 (41%), Gaps = 44/271 (16%) Query: 1 MIRQVIQRISNPEASI-ESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNP 59 M VI+R + EA + + L +++F L +QP + GR+ VE L HP+ Sbjct: 642 MEEAVIKR-AKIEADLRQGLIKKQFLLH------YQPQIFSNGRMTGVEALVRWQHPVRG 694 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGL-----------LASVNIDG 108 +PP + + E+ L+ Q ++ +E LA + + Sbjct: 695 --LVPPSDFIP----------LAEETGLILQLGNWVLEAACKQLAEWATRPELADLTVAV 742 Query: 109 PTLIALRQQPKILRQIE-------------RLPWLRFELVEHIRLPKDSTFASMCEFGPL 155 + QP+ + I+ +L L E+++ FA + Sbjct: 743 NVSVQQFHQPEFVDHIQEVIRVTGANPERLKLELTESMLAENVQDIIKKMFALKADGIGF 802 Query: 156 WLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVE 215 LDDFGTG ++ S L ++ D +KI + + P T+ +++L VI E Sbjct: 803 SLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAE 862 Query: 216 GVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 GVET + ++ S + QG+F SRP PIE Sbjct: 863 GVETEAQRNFLETSGCHSCQGYFFSRPLPIE 893 >UniRef50_A7JZR6 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7JZR6_VIBSE Length = 571 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 48/87 (55%) Query: 154 PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVI 213 + +DDFGTG N S +S++ DY+KI RE + L+ + QL+ + N Y VI Sbjct: 482 KISIDDFGTGNNNVSLISKINPDYLKIDREFVIGLKSDDKKVETLRQLIAMGNTYRCTVI 541 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLS 240 VEGVET + + A+ QG++ S Sbjct: 542 VEGVETADSAHLLTTLGAYIHQGYYYS 568 >UniRef50_B2JHP0 Diguanylate phosphodiesterase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JHP0_BURP8 Length = 354 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 49/88 (55%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ + LS + D +K+ARE+ + P + S +L L+ R V+V Sbjct: 252 LAVDDFGTGYSSLALLSTIDVDTVKVAREMLDGVPDCPRASAVASSVLTLLERLDVAVVV 311 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRP 242 EGVET R + P AQG+F RP Sbjct: 312 EGVETRALARWLAQWPKVLAQGFFYGRP 339 >UniRef50_B0MNA3 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNA3_9FIRM Length = 1195 Score = 63.5 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 8/127 (6%) Query: 126 RLP--WLRFELVEHIRLPKDSTF---ASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIK 179 RLP L E+ E I D+T + E G L +DDFG+G ++ + L + R+D +K Sbjct: 1050 RLPKHLLELEITESIE--NDATLRMTEKIKEHGFVLLMDDFGSGYSSLNTLQDTRFDVLK 1107 Query: 180 IARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFL 239 + RE F + G+ + + + G+I EGVET ++ + ++N AQG+ Sbjct: 1108 LDREFFSTHMSNDRGKKIIMHTISMSKDVGLGLIAEGVETADQAQFLENCGCDTAQGYLY 1167 Query: 240 SRPAPIE 246 ++P P++ Sbjct: 1168 AKPMPVQ 1174 >UniRef50_UPI0001AEC6AC sensory box/GGDEF family protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC6AC Length = 745 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 9/153 (5%) Query: 103 SVNIDGPTLIALRQQPKILRQIERLPWL----RFELVEHIRLPK----DSTFASMCEFGP 154 ++N+ GP L++ K+LR+ P L + EL E L S+ G Sbjct: 583 AINLSGPELLSDLFYEKLLRRFSESPELGERLKLELTETSVLASHYETKRRLTSLANVGA 642 Query: 155 -LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVI 213 + +DDFGTG A+ S L ++ IK+ RE + S R + L L I Sbjct: 643 TIIIDDFGTGHASLSQLIDMSASVIKVDREFVERVETSERHRKIVKMTLDLAKSLDMQTI 702 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 EGVET + R +++ QG+ +PAPIE Sbjct: 703 AEGVETQAQLRVLKDMGFNIFQGYLFGKPAPIE 735 >UniRef50_A6W234 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W234_MARMS Length = 655 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 17 ESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVS 75 ++L ER+ L +QP + G ++ VE L HP + LPP + I S Sbjct: 407 DALSERQIKLH------YQPKVSLKDGHIIGVEALARWYHPTDG--LLPPAHFIELIEQS 458 Query: 76 HRME-----VVK---EQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERL 127 R++ V+ EQ+DL Q+ F L+ N+ P+L+ + +IE Sbjct: 459 GRVQEFGRYVITNAIEQLDLWHQQGLFTHIAINLSPYNLLDPSLLDFTLRLLKNHKIEA- 517 Query: 128 PWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAR 182 L EL+E + + E G L +DDFGTGM++ S +S + ++IKI R Sbjct: 518 NKLEIELIESATSVNIEYISQSLNNFKEAGIKLAIDDFGTGMSSLSYISNLNVNHIKIDR 577 Query: 183 ELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + Q + + S ++ L N + VI EG+E + + QG++ ++P Sbjct: 578 SFIDGVEQDIRKQAVVSSVVMLANSFECEVIAEGIENKSQSEMLIEIGCLYGQGYYYAKP 637 Query: 243 APIETLNTAVLA 254 E + +LA Sbjct: 638 MTAENMQAMLLA 649 >UniRef50_C6JFR2 GGDEF/EAL/PAS-domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFR2_9FIRM Length = 634 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 26/230 (11%) Query: 34 WQPIYQTC-GRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLL---- 88 +QP++ T R + +E L+ + HP +PPD + I ++ R ++ QI LL Sbjct: 402 YQPVFWTKEDRYITLEALSRLKHPC--MGMIPPDVF---IGIAERQGLIA-QIGLLQFRR 455 Query: 89 ----AQKADFFIEHGLLASVNIDGPTLIALRQQP---KILRQIERLP-WLRFELVEHIRL 140 ++ ++ ++ N+ L+ I+++ E LP + +FE+ E + Sbjct: 456 VCRFIKENEYMMKQIKNVKFNLSPSELLKPGHSQLLINIVKEHELLPKYFQFEITETVAT 515 Query: 141 PKDSTFASMCE------FGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEG 194 +F E G L LDDFG+G AN +A+ + +D +K+ R L + + Sbjct: 516 EYSESFCKAVEDFTNAGIG-LCLDDFGSGYANLNAVLRLPFDVVKMDRSLLTGITCDEQA 574 Query: 195 RTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + ++ +M ++ EG ET EE ++ QG++ SRP P Sbjct: 575 AVFYHSIVTVMQNMGYTIVAEGAETEEEVSLLREWGVDMVQGYYFSRPLP 624 >UniRef50_C1M531 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M531_9ENTR Length = 236 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%) Query: 32 YTWQPIYQTCGRLMAVELLTVVT----HPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDL 87 + +P+ T +L+ VE+ T HPL+P D + + + EQI L Sbjct: 12 FIAEPMRDTTDKLLGVEINARFTSDTVHPLHP------DFIISAWDSEQKRNFMLEQIRL 65 Query: 88 LAQKADFFIEHGLLASVN-IDGPTLIALRQQPKILRQIERLPWLRFELVEHI---RLPKD 143 +A+K D+F + L+ ++N ID L+A+ P I + L ++ EL E + + Sbjct: 66 IAEKRDWFERNSLICTLNLIDEMALLAI-GDPAIRSALHALQFIALELSERFLSNTVCLN 124 Query: 144 STFASMCEFGP--LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQL 201 + + GP LWL D G+G S L +D +K+ R F+ + P +F L Sbjct: 125 NLLINSLRDGPNALWLGDLGSGSVGASPLVCGHFDVVKLDRGFFLEQVEKP----MFPVL 180 Query: 202 LHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQG 236 + + YC V+V+G + + N+ +A QG Sbjct: 181 IKNIREYCDRVVVKGGDDAWLSDALSNAGIWAVQG 215 >UniRef50_C9PFH4 Putative uncharacterized protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFH4_VIBFU Length = 498 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 35/264 (13%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQ 61 ++V+Q+ S + + +L+ER+F + +QPI + + ++ E L HP Sbjct: 226 KKVLQKQSLESSILHALRERQFDV------YFQPIVKASTQHVIGCEALLRWNHP--TQG 277 Query: 62 RLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEH------GLLASVNIDGPTLIALR 115 ++PP + I ++ R+ +++ D + +A +++ G VNID + Sbjct: 278 QIPPTIF---IPLAERLGFIEQLTDFVIDRALALVDNNAELMQGKYIGVNIDRSLMC--- 331 Query: 116 QQPKILRQIERL-------PWLRFELVEHIRLPK------DSTFASMCEFGP-LWLDDFG 161 + R +ER+ ++ FE+ E+ + + F + + G L +DDFG Sbjct: 332 NEAFTYRMVERVNANPSFAEYIAFEITENGDFSEQELKIVERNFQRLTQSGIRLLVDDFG 391 Query: 162 TGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPE 221 TG + + + + +D +KI R L L +L L VIVEGVET E Sbjct: 392 TGYSGLNFVRQFHFDTLKIDRVFVKNLGHELHLNNLLVSMLQLAQSLNMQVIVEGVETQE 451 Query: 222 EWRDVQNSPAFAAQGWFLSRPAPI 245 + ++ QG+F ++P P+ Sbjct: 452 QLDILRELGVDYIQGYFYAKPLPV 475 >UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JCS1_NITOC Length = 571 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 5/118 (4%) Query: 130 LRFELVEHIRLPK-DSTFASMCEFGPLWL----DDFGTGMANFSALSEVRYDYIKIAREL 184 L E+ E + L DS F ++ L + DDFGTG A+ S L + +D IKI R Sbjct: 435 LEIEVTEGLLLEDMDSAFNTLQSLSILGVHVSVDDFGTGHASLSYLKNLPFDSIKIDRSF 494 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + E RT+ ++ L + V+ EGVETPE+ +Q QG+F+S+P Sbjct: 495 IHGIPADSESRTITKAVIALGHSLNLKVVAEGVETPEQLLYLQKQGCDLVQGYFISKP 552 >UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8Z9_METSD Length = 828 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 5/130 (3%) Query: 129 WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARE 183 WL+FE+ E + L T ++ G + +DDFGTG + L++ +KI R Sbjct: 699 WLKFEITESLLLHDSDHIRQTLEALHSIGITIAIDDFGTGYSALGYLNKFPVSQVKIDRS 758 Query: 184 LFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPA 243 + + E L ++ + + + ++ EGVET E+ + + QG++ RP Sbjct: 759 FISDIATNTESALLVKAIIAMADSLGKELVAEGVETAEQAKLLSQLGCQYVQGYYYGRPV 818 Query: 244 PIETLNTAVL 253 P+ET N ++L Sbjct: 819 PLETFNQSLL 828 >UniRef50_B4RXD9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonas macleodii RepID=B4RXD9_ALTMD Length = 673 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 49/94 (52%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + LDDFGTG ++ S L+++ D +K+ R+ L+ S R + ++ L R V Sbjct: 567 IALDDFGTGYSSLSYLTQINIDTLKVDRQFVTELQTSERSRLVTGAIIDLAKRLSLSVCA 626 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 EG+E E+W ++ QG+ S+P P+ L Sbjct: 627 EGIENHEQWDYLREHGCDNVQGFLFSKPIPLSAL 660 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 76/174 (43%), Gaps = 11/174 (6%) Query: 88 LAQKADFFIEHGLLASVNIDGPTLIAL-----RQQPKILRQIERLPWLRFELVEHIRLPK 142 LA+ A + L+ +VN+ AL QQ L +I+ L+ EL E + L Sbjct: 662 LAEWAKSVEKKHLMIAVNVSAHQFRALDFVQSTQQAIDLHKIDA-SRLKLELTESVILED 720 Query: 143 -DSTFASMCEFGPLW----LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTL 197 D A M L LDDFGTG ++ S L ++ D +KI + L P + Sbjct: 721 VDDVIAKMHALKALGVKLSLDDFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIM 780 Query: 198 FSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTA 251 ++ L N + VI EGVET E ++ QG+ RP PIE L A Sbjct: 781 VKTIIDLANNFRINVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQLQFA 834 >UniRef50_D0Z2V6 Rtn protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2V6_LISDA Length = 488 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 19/223 (8%) Query: 35 QPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADF 94 QPI G ++ E+L + + +PP+ + T+ +V + LL Q ++ Sbjct: 267 QPIVDDNGDIVGGEILARWIK--DNGEIVPPNVFIP--TIEQYDLMVPMTLSLLNQVIEY 322 Query: 95 ---FIEHGLLASVNIDGPTLIALRQQPKI---LRQIERLPWLRFELVEHIRLPKDST--- 145 + L S N+ P L PKI R + R + EL E+ +L + T Sbjct: 323 QSLYHYKRLHLSFNVTEPCL----NDPKIKRVCRSLSRYCDVVLELTENQQLVQTDTAQT 378 Query: 146 -FASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLH 203 ASM +FG LDD+GTG + L ++++DY+KI + + + ++ Sbjct: 379 MMASMRKFGVKFALDDYGTGYSTLDYLRKIKFDYLKIDKSFVDHITSDDVSNAIIDNIIA 438 Query: 204 LMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 L +R +I EG+E PE+ +++ QG+ +P ++ Sbjct: 439 LADRLNIRIIAEGIEQPEQVEILKSRGVVYFQGYLYGKPMLLD 481 >UniRef50_A6W9K6 Diguanylate phosphodiesterase n=3 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W9K6_KINRD Length = 454 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Query: 143 DSTFASMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQL 201 D+ A++ G L LDDFGTG A+++ L + D +KI R L +S L S L Sbjct: 341 DAALAAIRARGVRLALDDFGTGYASYAYLQRFQPDVVKIDRCFVAALGRSERDDLLTSSL 400 Query: 202 LHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + L + GV+ EGVETPE+ R + + AQG+ S P + L ++A Sbjct: 401 IGLGLQLGCGVVAEGVETPEQARMLADLGVTTAQGYLFSPPRTAQALGARLVA 453 >UniRef50_Q89BZ8 Blr8000 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89BZ8_BRAJA Length = 865 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 29/233 (12%) Query: 34 WQP-IYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 +QP + GR++ VE L HP +PP R+ I ++ + ++ E + ++A Sbjct: 613 YQPKVSCANGRILGVEALARWHHP--KEGDIPPQRF---IKIAEEIGLIMEIDRFVLRRA 667 Query: 93 ----DFFIEHG--LLASVNIDGPTLIALRQQPKILRQIERL--------PWLRFELVEHI 138 I G L+ +VN+ + + P +R I P L E+ E + Sbjct: 668 LAEIGGLIRAGSNLVLAVNVAATEI----EDPLFIRDIITTVREADFPPPNLEIEITESV 723 Query: 139 RLPKDST----FASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPE 193 + + + + G +DDFG G +N S ++ + +D +K+ R L + E Sbjct: 724 AMRNPDVVRERISLLRQLGIRFAMDDFGAGYSNLSTMARLPFDAVKLDRTLVAGVAGDRE 783 Query: 194 GRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 +T+ L L + +VEGVET E+ R + A AQG+ S P P+E Sbjct: 784 KQTILRLALGLADELGFETVVEGVETAEDLRFAAENGATMAQGYIFSPPLPLE 836 >UniRef50_C1D667 Predicted signal transduction protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D667_LARHH Length = 560 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 2/94 (2%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++ + LS + D +KI R L +P R++ ++ L + VI EG Sbjct: 452 IDDFGTGYSSLAYLSRLPVDELKIDRGFLTDL--TPHNRSIVRSIVSLGHALGLSVIAEG 509 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 VET E ++++Q++ AQG+ ++RP P+ T Sbjct: 510 VETTEVYQEMQHAGCDLAQGYLIARPLPLAEFET 543 >UniRef50_Q5QVU6 Signaling protein (EAL,CBS,GGDEF domains) n=2 Tax=Idiomarina RepID=Q5QVU6_IDILO Length = 592 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 46/94 (48%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + +DD G G + SE+R DY+KI R + +S R +L L V+V Sbjct: 152 IAIDDLGAGYSGLKLWSELRPDYVKIDRYFIHSIEKSSVKREFVQSILSLATSLRTKVVV 211 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 EG+ETP+E +Q QG+ L RPAP L Sbjct: 212 EGIETPDELEQLQVMGVNYCQGFLLGRPAPYPVL 245 >UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2P9_BACS4 Length = 696 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 5/130 (3%) Query: 129 WLRFELVEHIRLPKDSTFASMCE----FG-PLWLDDFGTGMANFSALSEVRYDYIKIARE 183 W+ E+ E + L D+ + E G + +DDFGTG ++ S L + +++ IK+ + Sbjct: 562 WIEVEMTESLILEHDNDILNKLEGLKQLGIHIAIDDFGTGYSSLSYLKKYKFNTIKLDKS 621 Query: 184 LFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPA 243 + S + + + + ++ L N+ V+ EGVE E+ +Q QG++ SRP Sbjct: 622 FINDIHTSADNQAIITFIIQLSNQLNMKVVAEGVEIKEQHDILQKLNCDELQGFYFSRPK 681 Query: 244 PIETLNTAVL 253 P++ +L Sbjct: 682 PVKEFEELLL 691 >UniRef50_C8WAS4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Zymomonas mobilis RepID=C8WAS4_ZYMMN Length = 579 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 5/122 (4%) Query: 130 LRFELVEH--IRLPKDS--TFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L EL E +R P+ S +M E G + +DDFGTG ++ S L D++KI R Sbjct: 446 LTLELTESALMRYPEQSISVINTMHELGIKISMDDFGTGYSSLSYLKTFPIDHLKIDRSF 505 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 L + + + + + IVEG+ETPE+ + + + AQG++ SRP P Sbjct: 506 VTNLAEDKTAIAITRAITSMASTLSIKTIVEGIETPEQKKIIMDLGCDYAQGFYFSRPLP 565 Query: 245 IE 246 ++ Sbjct: 566 VD 567 >UniRef50_B5BIE6 Putative uncharacterized protein n=34 Tax=Salmonella enterica RepID=B5BIE6_SALPK Length = 235 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 11/210 (5%) Query: 32 YTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQK 91 + +PI G L+ VE+ T +P++ L P+ + S + + + + +A K Sbjct: 5 FMAEPIRAMEGDLLGVEITTHFAS--SPARPLHPEFVISSWDNSQKRRFLLDLLRTIAAK 62 Query: 92 ADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCE 151 +F+ HGL VNID + Q I + + ++ ++ EH ++ + Sbjct: 63 HGWFLRHGLFCIVNIDRGMAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPLIH 122 Query: 152 F-----GPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMN 206 PLWL D G G A + L + +K+ R F+ S + F L+ + Sbjct: 123 ALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSFFI----SQIEKMTFPLLVKHIR 178 Query: 207 RYCRGVIVEGVETPEEWRDVQNSPAFAAQG 236 RYC ++V G E ++ + +A QG Sbjct: 179 RYCDKIVVGGQENTRYLPVLKTAGIWATQG 208 >UniRef50_Q2BJL1 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJL1_9GAMM Length = 984 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 48/88 (54%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ S L+ + D +KI R ++ S E R + ++HL + VI Sbjct: 882 LAMDDFGTGYSSLSYLASLPIDRVKIDRSFVSDIQHSNEARGIIESIIHLGKILNKTVIA 941 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRP 242 EGVE E+ ++ AQG+ +SRP Sbjct: 942 EGVEETEQLELLKRLGCHEAQGYLISRP 969 >UniRef50_A4A706 Hypothetical signaling protein CC0091 n=1 Tax=Congregibacter litoralis KT71 RepID=A4A706_9GAMM Length = 835 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 10/155 (6%) Query: 101 LASVNIDGPTLIALRQQPKILRQIERLP-WLRFELVEHIRLPKDST----FASMCEFG-P 154 L+SV + PTL+ +R P WLR EL E +L + S ++ G Sbjct: 677 LSSVQLGSPTLV--DDLNSAVRTAGGKPEWLRLELTESRQLAEASVIRQRLLNLRALGFT 734 Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFG G ++FS LS +D +KI R L + SP + ++ + +R V+ Sbjct: 735 LAIDDFGVGYSSFSYLSSDFFDELKIDRSLLLAAMGSPTRAVVIGSIVAMAHRLGLDVVG 794 Query: 215 EGVETPEEWRDVQNSPAFAA-QGWFLSRPAPIETL 248 EG E+ EE D+ + + QG+ ++RP P+++L Sbjct: 795 EGAES-EEQEDLYIAQGCSVIQGFHIARPMPLDSL 828 >UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SFB8_9CAUL Length = 726 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 22/223 (9%) Query: 34 WQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPD-RYFTEITVSHRMEVVKEQIDLLAQKA 92 +QP GR++ VE L +HP QR P YF + ++ ++ + L+ ++A Sbjct: 481 YQPQVDHNGRIVGVEALARWSHP----QRGPISPAYF--VPLAEECGLMMDLGTLIMRRA 534 Query: 93 DFFIEH----GLLASVNIDGPTLIALRQQPKI---LRQIERLP-WLRFELVEHIRL---- 140 I+ GL ++N+ L + R P++ LR+ P + E+ E + L Sbjct: 535 --LIDSKRWPGLKVAINVSATQLRSSRFLPELKDMLRETGVEPRSIEIEITEGMLLNDDQ 592 Query: 141 PKDSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFS 199 P +T ++ + G + LDDFGTG ++ S LS D IKI R L P+ L Sbjct: 593 PTQNTLNALRQMGFSIALDDFGTGYSSLSYLSRYPVDKIKIDRSFVSNLGVDPDAEALIR 652 Query: 200 QLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 ++ L ++ EGVET + ++ + QG+ S+P Sbjct: 653 AIIKLAKALHLSILAEGVETKAQSHILRQAGCAIIQGYLFSKP 695 >UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 Tax=Aurantimonadaceae RepID=Q1YLJ5_MOBAS Length = 828 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 9/154 (5%) Query: 101 LASVNIDGPTLIALRQQPKILRQIERLPW-LRFELVEHIRLPK-DSTFASMCEFGPLWL- 157 L++V PTL+A ++L + P L+ E+ E + L + D + + EF + L Sbjct: 645 LSAVQFKSPTLVA--DVRRVLAKSGLQPSRLQIEVTESLFLDEGDKVLSILTEFRRMGLT 702 Query: 158 ---DDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 DDFGTG ++ L+ +D IKI + FV PE + ++ L N VI Sbjct: 703 ISMDDFGTGYSSLGYLNRFPFDKIKIDQS-FVRDMSRPENIAIVRSVIGLSNALDMRVIA 761 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 EG+ETPE+ R + QG++ SRP P L Sbjct: 762 EGIETPEQMRILYAEGCREMQGYYFSRPRPASDL 795 >UniRef50_C7GCP1 Sensory box/GGDEF family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GCP1_9FIRM Length = 643 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 48/93 (51%) Query: 156 WLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVE 215 +LDDFGTG +NF + ++ D +K R L +M + + + + + V+ E Sbjct: 542 YLDDFGTGYSNFDRILSLKLDVVKFDRSLLLMANKDENSQFILNYFSTAFKKLGYKVLYE 601 Query: 216 GVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 GVET E+ NS A QG+ S+P PIE L Sbjct: 602 GVETDEQETICVNSHADYLQGFKFSKPIPIEEL 634 >UniRef50_Q5R0L9 Signaling protein with a sensor domain, CHASE, GGDEF and EAL domains n=1 Tax=Idiomarina loihiensis RepID=Q5R0L9_IDILO Length = 712 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 6/97 (6%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGR---TLFSQLLHLMNRYCRG 211 L +DDFGTG ++ + L DYIKI R L Q+P+ + L LL + Sbjct: 610 LAIDDFGTGYSSINYLQRYPVDYIKIDRSF---LSQAPQNKVQVALLDALLQVARALDIN 666 Query: 212 VIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 VI EGVET ++W +Q AQG+F+S P P+ L Sbjct: 667 VIAEGVETRQQWELLQRQRCDFAQGYFISEPLPLNEL 703 >UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZJQ2_THASP Length = 1050 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 17/221 (7%) Query: 42 GRLMAVELLTVVTHP----LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIE 97 GR + +E L HP L P + LP D TE+ VV + L + ++ Sbjct: 806 GRPLGMEALLRWQHPERGLLAPGEFLP-DLEGTELETRLGQWVVDHALGALERCRAAGLD 864 Query: 98 HGLLASVNID-GPTL---------IALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFA 147 G+ SVN+ GP + AL + P I + L L ++ + L D A Sbjct: 865 IGV--SVNVGPGPLMQAGFVASVRSALERHPDIPPERLELEILESTALDDMVLAMDVLEA 922 Query: 148 SMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNR 207 + LDDFGTG A+ ++ +D +KI R + + + E R + ++ L Sbjct: 923 CHRLGVRIALDDFGTGYASLRHFRQLPFDRLKIDRSFVLDMLEDGEARAIVGAVVQLART 982 Query: 208 YCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 + R VI EGVETP + QG+ ++RP P+E + Sbjct: 983 FGREVIAEGVETPAHAAALLALGCRLGQGFGIARPMPVEHI 1023 >UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VEI6_VIBAL Length = 511 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Query: 146 FASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHL 204 F+ + + G + +DDFGTG ++ + L + + +YIKI + + +P R L + L Sbjct: 398 FSDLKKLGCKIAIDDFGTGHSSLANLQKFQVNYIKIDQMFVQGVGSNPTSRHLVESTIEL 457 Query: 205 MNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 NR ++ EGVET E+ + N QG+ S+P P+E Sbjct: 458 ANRLSLEIVAEGVETEEQQEYLANYHVKYLQGFLFSKPIPLE 499 >UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DIH6_THEEB Length = 1292 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 22/238 (9%) Query: 34 WQPI-YQTCGRLMAVELLTVVTHP----LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLL 88 +QP+ + RL+ +E L HP ++P+ +P I + + + L Sbjct: 1056 YQPVVHLQSQRLVGMEALVRWQHPERGLVSPAHFIPIAEDTGLIVALDQWALAQACWQLW 1115 Query: 89 AQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIE----RLPW----LRFELVEHIRL 140 + + L+ SVN+ TL Q P L+ ++ R P L EL E I + Sbjct: 1116 TWRQQYSTAANLVLSVNVSAKTL----QDPTFLQHLDTIRQRYPLPKGQLLLELTERIGI 1171 Query: 141 PKDSTFASMCE-----FGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGR 195 S S+ E + +DDFGTG + S L + ++K+ R L ++ Sbjct: 1172 ELGSEMLSLLESLRHRHVEISIDDFGTGYSCLSYLHSLPIQHLKVDRSFVSQLEENERNL 1231 Query: 196 TLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + +L L + VI EG+ETP++ + +Q QG+ +RP P ET + L Sbjct: 1232 QIIRMILLLSKQLGYRVIAEGIETPKQLQILQELGCDEGQGYLFARPLPPETFASLFL 1289 >UniRef50_A4BH36 Sensory box/GGDEF family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH36_9GAMM Length = 518 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 7/108 (6%) Query: 135 VEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEG 194 + +IRL K S L LDDFGTG ++ S L+++ +D +KI + L + + Sbjct: 390 LNNIRLLKSSGI-------RLALDDFGTGFSSLSYLNQLPFDVLKIDKSFVDGLENNDKD 442 Query: 195 RTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + + ++ + +R V+VEGVETP++ ++ A A QG++ S+P Sbjct: 443 QAMVMAIISIAHRLSMEVVVEGVETPQQVHVLRELSADALQGYYYSKP 490 >UniRef50_A4BB01 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BB01_9GAMM Length = 699 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 5/112 (4%) Query: 137 HIRLPKDSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGR 195 H +L +D ++ + G L +DDFGTG ++ S L ++ D +KI + FV L ++ EG Sbjct: 583 HAQLTRD--IQTLRDMGITLSIDDFGTGYSSLSYLKDLPVDVLKIDKS-FVALAETTEGD 639 Query: 196 T-LFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 T L + L N + EGVET ++ +QN QG++ S+P P E Sbjct: 640 TVLIKTIAELANNMGLSSVAEGVETEQQVHYLQNLGISLLQGYYFSKPQPAE 691 >UniRef50_A8H0Z8 Response regulator receiver modulated diguanylate phosphodiesterase n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H0Z8_SHEPA Length = 405 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 24/223 (10%) Query: 42 GRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEH--- 98 G + E L HP+ LPP + +++ H+ ++ LL+ ++ ++H Sbjct: 172 GEWKSCEALIRFVHPI--LGVLPPTSFLPQLSKMHK----DAELALLS--INYILQHQAE 223 Query: 99 --GLLASVNIDGPTLI----------ALRQQPKILRQIERLPWLRFELVEHIRLPKDSTF 146 G +VNI+ TL+ +QQP + +Q+ L+ R + ++ Sbjct: 224 LAGRPVAVNINPTTLMHNHFVDRLLDIAKQQPSLCKQVYFEITESDALINTGRALESASR 283 Query: 147 ASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMN 206 ++ F L +DDFGTG ++ + L + +D +K+ + S + L L + Sbjct: 284 LALHGFN-LSIDDFGTGYSSLTLLDTLPFDSLKVDMSFIRAMESSKTAAAIVEACLLLSS 342 Query: 207 RYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 R + EGVET W+ +Q+ AQG++++ P P+E L Sbjct: 343 RLELKSVAEGVETQVLWQQLQSLGCTLAQGYYIAAPMPVERLK 385 >UniRef50_B8KAR1 Sensory box protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KAR1_VIBPA Length = 155 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 47/97 (48%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 +WLDDFGTG ++ S L E ++D +KI R L +L +L + + Sbjct: 48 IWLDDFGTGYSSLSYLQEYQFDGVKIDRSFIFCLSPENNNTSLIEAILSIAKSMKMQSVA 107 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTA 251 EG+ET + ++ QG+ +SRP P+ N A Sbjct: 108 EGIETEHQCLLLEQLGCEYGQGYLISRPLPVNEFNRA 144 >UniRef50_Q1LE38 Diguanylate cyclase/phosphodiesterase n=6 Tax=Burkholderiaceae RepID=Q1LE38_RALME Length = 676 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 5/116 (4%) Query: 132 FELVEHIRLPKDSTFA-SMCEFGPLW----LDDFGTGMANFSALSEVRYDYIKIARELFV 186 E+ E + TF +M G L LDDFG+G AN L+++ +IK+ + L Sbjct: 199 IEITEQTAIGNAQTFGEAMALLGELGVHYALDDFGSGHANLDMLADLSPQFIKLDKSLVR 258 Query: 187 MLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + + +L +M + VI EG+E EE V++ FA QG+FL RP Sbjct: 259 GIGTCSRRLEILRGMLRMMGAFGGHVIAEGIERAEELAMVRDLGVFAGQGYFLGRP 314 >UniRef50_B8EE65 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=6 Tax=Gammaproteobacteria RepID=B8EE65_SHEB2 Length = 744 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 52/96 (54%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + +DDFGTG ++ + LS++ +D IKI + + + ++ L R+ VI Sbjct: 639 IAIDDFGTGFSSLAYLSKLTFDRIKIDKSFIDNVTSDDGAAAIVDSIILLGQRFHMNVIA 698 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 EGVET E+ + + + AQG+F ++P P+ L T Sbjct: 699 EGVETKEQAKWLSDRGCHDAQGYFYAKPMPLPELLT 734 >UniRef50_A1S8S6 Putative diguanylate phosphodiesterase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8S6_SHEAM Length = 413 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Query: 152 FGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRG 211 FG L LDDFGTG N + L ++ Y +KI R L + + + + + + L+ + + Sbjct: 290 FG-LSLDDFGTGFTNINQLRDLPYTEVKIDRSLIINIHRDSFCQAILNGLVEIARQLGIT 348 Query: 212 VIVEGVETPEEWRDV-QNSPAFAAQGWFLSRPAPIETLNT 250 ++ EG+E +E + + Q PA QG+ +S P ++TLNT Sbjct: 349 LVAEGIEHMDELKYLMQTYPALILQGYLISLPRSLDTLNT 388 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 5/122 (4%) Query: 130 LRFELVEHIRLPKDSTFAS----MCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L+ EL E + L + S + G L LDDFGTG ++ S L ++ D IKI R Sbjct: 703 LKLELTESVVLSDVADVVSKMHALKALGVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSF 762 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + P + +++L + + VI EGVET ++ ++ + A QG+ +P P Sbjct: 763 VSDVTTDPSDAVMVQTIINLAHNFRMNVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMP 822 Query: 245 IE 246 I+ Sbjct: 823 ID 824 >UniRef50_Q07KB0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rhodopseudomonas palustris RepID=Q07KB0_RHOP5 Length = 613 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 50/93 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG +N + L+ + + +KI R L + SP+G L ++ + ++ EG Sbjct: 482 IDDFGTGFSNLALLARLPFTTLKIDRSLIEGIGWSPKGEVLVKTIIAMAEGLGHSIVAEG 541 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 VETP++ + + QG+ +RP P E ++ Sbjct: 542 VETPDQRAWLDDKGCHVHQGFLFARPMPAEEID 574 >UniRef50_C9QLI2 Putative uncharacterized protein n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QLI2_VIBOR Length = 775 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 50/96 (52%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + +DDFGTG A+F L E +D +KI R + + L+HL + VI Sbjct: 527 IAVDDFGTGSASFRYLKECYFDTLKIDRTFIQNITPDSRQYNIVKALVHLSAKLDLEVIA 586 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 EGVET +E +++ QG++ S+P P+E L T Sbjct: 587 EGVETEQELEAMRSLGVNLIQGYYFSKPLPLEQLPT 622 >UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MI55_ALKOO Length = 737 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 49/90 (54%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG +NF+ L E+ D IKI R ++ + R + ++ L ++ V EG Sbjct: 637 IDDFGTGYSNFNYLKEMGVDEIKIDRSFIAETTKNSKKRAITKTIILLAHQLDIAVTAEG 696 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 VET E+ ++ S QG++ SRP P E Sbjct: 697 VETKEQLEFLRESSCSKIQGFYYSRPVPPE 726 >UniRef50_UPI0001C362AF diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C362AF Length = 660 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 46/88 (52%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ L+E+ D +KI R L S ++ L + + V + Sbjct: 451 LSMDDFGTGYSSLGRLAEIGMDVVKIDRYFVKALHISQYNHDFVESVIRLCHNLGKAVCM 510 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRP 242 EGVET EEW + A QG+++SRP Sbjct: 511 EGVETKEEWETISLLNADMVQGFYISRP 538 >UniRef50_A7K0A9 Sensory box/GGDEF family protein n=6 Tax=Vibrio RepID=A7K0A9_VIBSE Length = 719 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 52/94 (55%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 +WLDDFGTG + + L ++ +D +KI R ++++ + +L ++ + + V+ Sbjct: 607 VWLDDFGTGYSALAYLQQMSFDGLKIDRSFIAQIQKNEQDDSLVRAIISMAHNLRMRVVA 666 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 EG+ET + +++ QG+FL RP P E + Sbjct: 667 EGIETQTQLTRMESLHCDVVQGFFLGRPVPAEEI 700 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 61.2 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 6/130 (4%) Query: 119 KILRQIERLP-WLRFELVEHIRLPKDSTFASMCE----FG-PLWLDDFGTGMANFSALSE 172 K+L + E P L E+ E I + ++ + + E G + +DDFGTG ++ + L++ Sbjct: 765 KVLEETELKPEALDIEITESIAINQNQSVVAKLEQLQNLGIQISIDDFGTGYSSLAYLTK 824 Query: 173 VRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAF 232 + +KIARE + SP + S ++ L VI EGVET E+W+ + Sbjct: 825 YPINTLKIAREFICGITTSPLEEAIISSIITLSKELNLEVIAEGVETEEQWKFLYEQNCD 884 Query: 233 AAQGWFLSRP 242 QG+F+S+P Sbjct: 885 HIQGFFISKP 894 >UniRef50_C8Q5S9 Putative diguanylate phosphodiesterase n=1 Tax=Pantoea sp. At-9b RepID=C8Q5S9_9ENTR Length = 146 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 9/145 (6%) Query: 114 LRQQPKILRQIERLPWLRFELVEHIRLPKDS----TFASMCEFGPLWLDDFGTGMANFSA 169 L Q+ +I + P+LR E+ E D ++ E LWL D G+G ++ A Sbjct: 5 LIQEEEIADLAKSKPFLRLEISEGFPNLSDGRSNRVLQALAEEYRLWLGDLGSGESSLRA 64 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L E YD +KI + F + S ++ ++ + RYC+ +I+EGVE+ E++ ++ Sbjct: 65 LQENLYDAVKIDNDFFKIYSNS----GIWPVVIKNIMRYCQFIIIEGVESTEQYHAIEKD 120 Query: 230 PAFAAQGWFLS-RPAPIETLNTAVL 253 G+F S R IE+LN + Sbjct: 121 IKAVQGGFFKSVRFENIESLNKKFI 145 >UniRef50_A5L0X0 Probable response regulator n=3 Tax=Vibrionales RepID=A5L0X0_9GAMM Length = 398 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 4/126 (3%) Query: 126 RLPWLRFELVEHIRLPKDSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 +L +LVE + L ST +C G PL +DDFGTG ++ L ++ + +K+ + Sbjct: 256 KLELTESDLVESVALALAST-TRICMRGIPLAIDDFGTGYSSLKQLEDLPFSALKLDIDF 314 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ--NSPAFAAQGWFLSRP 242 ++QS R + L+L + EG+E W+D++ ++ AQG+F++RP Sbjct: 315 VKNIQQSRSSRAIVRASLYLAKLLDLTTVAEGIEDISIWKDIRSMSNKDTLAQGYFIARP 374 Query: 243 APIETL 248 P + L Sbjct: 375 MPADQL 380 >UniRef50_A5F7H4 PAS/EAL family protein n=26 Tax=Vibrio cholerae RepID=A5F7H4_VIBC3 Length = 818 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 49/92 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++FS L+E ++DY+KI RE + + + L + V+ EG Sbjct: 571 IDDFGTGFSSFSYLTECQFDYLKIDREFVTNIEVGSRRYAIVKMMTDLAHTLGVKVVAEG 630 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 VET E +++ QG+F ++P P+ L Sbjct: 631 VETEHEVYVLKSLGVDLLQGFFFAKPLPLSNL 662 >UniRef50_A4BB62 Inner membrane protein PLUS sensory box protein LssE n=1 Tax=Reinekea blandensis MED297 RepID=A4BB62_9GAMM Length = 616 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 44/270 (16%) Query: 15 SIESLQERRFWLQC--------ERAY-TWQPIYQTCGR-LMAVELLTVVTHP----LNPS 60 S+E + RR+ LQ E+ Y QPI R ++ E+L HP ++P+ Sbjct: 355 SMELIVNRRYQLQSQIMSAILDEQFYIVLQPIVHLESRNIVGAEVLARWAHPELGEISPA 414 Query: 61 QRLP---PDRYFTEI---TVSHRMEVVKEQIDLLAQ-KADFFIEHGLLASVNIDGPTLIA 113 + +P + E+ + H +E + LL Q + +F++ +VNI L + Sbjct: 415 EFIPLAESNGLIDELWIFVMHHALEAAR----LLRQLEPEFYV------TVNIAPNQLKS 464 Query: 114 ---LRQQPKILRQIERLPW--LRFELVEHIRLPKDSTFASMCE------FGPLWLDDFGT 162 Q ++R+ +LP+ L+ E+ E + +D+ F + + G L LDDFGT Sbjct: 465 PGFFDQCEHVIRE-SQLPFSALKLEITESEMIERDTEFDATLDQLHQNNIG-LLLDDFGT 522 Query: 163 GMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEE 222 G +N L ++ ++ IK+ R + + L ++ + G+I EG+ET +E Sbjct: 523 GYSNLGHLQKMLFEAIKVDRLFINHCHLNEDTGALLRAIVAMSGELNVGLIAEGIETEDE 582 Query: 223 WRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 VQ QG+ L+RP + L A+ Sbjct: 583 LARVQELGILKGQGYLLARPMLVNDLKQAL 612 >UniRef50_C4L705 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L705_EXISA Length = 615 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 5/128 (3%) Query: 128 PWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAR 182 +L E+ E + + F + E G + +DDFGTG + F L IKI R Sbjct: 476 SYLTLEITESVGMENQQHVIDRFVAFREEGFSISIDDFGTGFSAFVYLKHYPIHEIKIDR 535 Query: 183 ELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + + P G + ++ L + EGVET E+W ++ QG++ SRP Sbjct: 536 QFIQVTENDPTGNVIVESIVDLARGLNLKTVCEGVETLEQWNALRELGCDEMQGYYFSRP 595 Query: 243 APIETLNT 250 P+E L T Sbjct: 596 LPLEELET 603 >UniRef50_A8M3L5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Salinispora RepID=A8M3L5_SALAI Length = 842 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 16/229 (6%) Query: 40 TCGRLMAVELLTVVTHP----LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFF 95 G VE L HP LNP + + P ++ R V+ + + L AQ A Sbjct: 600 ATGAPTGVEALIRWRHPRRGWLNPHEFIRPVENSEQLGTFTRY-VLDKALGLAAQWARDG 658 Query: 96 IEHGLLASVNIDGPTLIALRQQPKILRQIER--LPWLRF--ELVEHIRLPK----DSTFA 147 ++ L SVN+ +L+ R +I + R +P R E+ E + + + D Sbjct: 659 LD--LPISVNLSARSLLDPRLPAEIAEALRRHQVPARRLVLEITETVVMSELEVIDEVLG 716 Query: 148 SMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMN 206 ++ G L +DDFGTG ++ + L+ + D +K+ R + + SPE + + L Sbjct: 717 TLRTMGVQLAVDDFGTGFSSLTFLTRIAVDELKVDRSFVIRMADSPEAAAIVRTTVGLAQ 776 Query: 207 RYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 + V+ EGVET E+ + AAQG+ +P P + + + L Sbjct: 777 QLGLRVVAEGVETAEQRSALAELGCTAAQGYLFFKPMPADKIGAVLGGL 825 >UniRef50_B4U6R5 Diguanylate phosphodiesterase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6R5_HYDS0 Length = 280 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 21/153 (13%) Query: 96 IEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPL 155 ++H LL +NI+ + L K L +E+L K S F + Sbjct: 134 LQHTLLGYINIEITESLFLENFDKALSTLEKL--------------KSSGF-------KI 172 Query: 156 WLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVE 215 +DDFGTG ++FS L ++ DY+KI + + R++ ++ L + I E Sbjct: 173 SIDDFGTGYSSFSYLKDLPIDYLKIDISFVRHILDDKKSRSITKTIIELAHNLEMKTIAE 232 Query: 216 GVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 GVET E++ +++ QG++L++P PI L Sbjct: 233 GVETKEQFELLKSLGCDFIQGFWLAKPMPISEL 265 >UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 Tax=cellular organisms RepID=Q1LGY0_RALME Length = 536 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 14/235 (5%) Query: 29 ERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRM-EVVKEQID 86 E + + PI + G+ + E L H Q + PD++ HR+ ++ +D Sbjct: 288 ELSLAYMPIVELESGKWIGAEALMRWCHD---GQWIAPDKFIPLAERHHRIRKLTNRMLD 344 Query: 87 LLAQKADFF---IEHGLLASVNIDGPTL--IALRQQPKILRQIERLPWLRFELVEHIRLP 141 LL A + + SVN+ L A+ Q+ +RQ + + E E + L Sbjct: 345 LLVADAQALPRDLARAMYFSVNLSAEDLAACAIAQRVADVRQACGVDGVMVEATEGVLLE 404 Query: 142 KDSTFASMCEFGPLWL----DDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTL 197 ++ L + DDFGTG ++ S L + DYIKI + + + + Sbjct: 405 ASRVIPNIERLRKLGIRVAIDDFGTGYSSLSYLGSLDVDYIKIDKSFVSAIGTNSVRGHV 464 Query: 198 FSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 + ++ + VI EGVET E+ + AQGW + P++ +A+ Sbjct: 465 VAHIIDMAKDVGVAVIAEGVETQEQADYLMARGVRYAQGWLFGKAMPMQDFVSAI 519 >UniRef50_Q0EYZ1 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYZ1_9PROT Length = 404 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 49/90 (54%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG +N + L ++ +D IK+ R + ++L + + + ++ Sbjct: 295 LSIDDFGTGHSNLTQLRDLPFDEIKLDRSFVQGAAEDERAKSLLESSVDIAKKLDMEIVS 354 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 EGVET E+W+ V+ QG+F+SRP P Sbjct: 355 EGVETLEDWQRVEMLGCDQVQGYFVSRPLP 384 >UniRef50_Q2CI03 Diguanylate cyclase, putative n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CI03_9RHOB Length = 490 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 47/91 (51%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG A+ +++ D IKI R + E R + +L + +R + EG Sbjct: 379 LDDFGTGHASITSIRRFPVDRIKIDRSFVASVDTEIEQRGMMEAILTMADRLGLDTLAEG 438 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIET 247 VETPEE ++ AQG+ ++RP P E Sbjct: 439 VETPEELAALRELGCRQAQGFLIARPMPAEA 469 >UniRef50_A4EE01 Putative uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EE01_9RHOB Length = 654 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 31/253 (12%) Query: 18 SLQERRFWLQCERAYTWQPIYQ-----TCGRLMAVELLTVVTHP----LNPSQRLP--PD 66 +L++RR ++ + P YQ G+++ E L+ HP L+PS LP + Sbjct: 386 TLEDRRILVEAMESGQIIPYYQPKISIETGQIVGFEALSRWEHPTRGTLSPSHFLPMINE 445 Query: 67 RYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGL---LASVNIDGPTLIALRQQPKILRQ 123 ++H + V + + +L +E GL S+N+ + L + ++ Sbjct: 446 LALQGTFMAHTAKHVMKDLAIL-------VEDGLDPGQVSINMSEVAMATLMGRKELFAI 498 Query: 124 IERLPWLR----FELVEHIRLPKDSTFASMC-----EFGP-LWLDDFGTGMANFSALSEV 173 I+R P LR FE+ E I + + S + G + LDDFGTG A+ L E+ Sbjct: 499 IDRYPELRPHLTFEITEDIFIARASDIIRRSIRLFRQAGVRISLDDFGTGYASLQHLKEL 558 Query: 174 RYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFA 233 +D +K+ L P + L L+ + +I EGVET ++ +++ Sbjct: 559 EFDELKLDTGFVRDLGIDPAAKILIEGLVTITKGLQVELIAEGVETAQQRDMLRDMGCKY 618 Query: 234 AQGWFLSRPAPIE 246 QG+F P+E Sbjct: 619 VQGFFYGAALPLE 631 >UniRef50_B8GQM0 Sensory box protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQM0_THISH Length = 627 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 100/241 (41%), Gaps = 23/241 (9%) Query: 19 LQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHP----LNPSQRLPPDRYFTEIT 73 L+ RR + E +QP+ GR + E L HP L P Q LP Sbjct: 367 LEVRRGLEEGEFRLVFQPVVDAQTGRAVGAEALVRWAHPEQGLLGPGQFLPQ---IDGTA 423 Query: 74 VSHRME--VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLP--- 128 VS R+ V++ + LA + GL SVN+DG L ++ + P Sbjct: 424 VSARLGAWVLRHAVATLADWERRGL--GLWLSVNVDGHELEGHGFASRLREMLREHPDCD 481 Query: 129 --WLRFELVEHIRLPKDSTFA----SMCEFGPLW-LDDFGTGMANFSALSEVRYDYIKIA 181 L+ E+VE + + E G + LDDFGTG A+ + L + IKI Sbjct: 482 PSRLKIEIVESTVINDFDKVGRLIEELAELGVRFVLDDFGTGYASIAYLRRLHIQAIKID 541 Query: 182 RELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSR 241 R FV + P R L L+ + + + EGVET E+ + QG++L+R Sbjct: 542 RG-FVAAMEDPGERALVGSLIQIASTLFVECVAEGVETAEQRATLLGMGCRLLQGYYLAR 600 Query: 242 P 242 P Sbjct: 601 P 601 >UniRef50_B4S0H1 Sensory box/GGDEF family protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S0H1_ALTMD Length = 653 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 9/153 (5%) Query: 103 SVNIDGPTLIALRQQPKILRQIERLPWL----RFELVEHIRLPKDST----FASMCEFGP 154 ++N+ GP L++ K+LR+ P L + EL E L + S+ G Sbjct: 491 AINLSGPELLSDLFYEKLLRRYSESPELGKRLKLELTETSVLASHNETKRRLTSLSNVGA 550 Query: 155 -LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVI 213 + +DDFGTG A+ S L ++ IK+ RE + S R + L L I Sbjct: 551 TIIIDDFGTGHASLSQLIDMSASIIKVDREFVERVETSERHRKIVKMTLDLAKSLEMQTI 610 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 EGVET + +++ QG+ +PAPIE Sbjct: 611 AEGVETRAQLSVLKDMGFKHFQGYLFGKPAPIE 643 >UniRef50_A6F7T4 PAS:GGDEF n=1 Tax=Moritella sp. PE36 RepID=A6F7T4_9GAMM Length = 1165 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 44/266 (16%) Query: 11 NPEASIESLQERRFWLQCERAYT-------WQP-IYQTCGRLMAVELLTVVTHPLNPSQR 62 NPE + +Q+ + + ++A + +QP I G++ E L HP + Sbjct: 882 NPERDQQKIQKHQQLDEIKQALSNNEFALYYQPKINMKTGKVFGAEALIRWFHP---EKG 938 Query: 63 LPPDRYFTEITVSHRME------VVKEQIDLLA--QKADFFIEHGLLASVNIDGPTLI-- 112 L P F I +E V+ + + + QK F+E SVNI L+ Sbjct: 939 LIPPLDFLPIIEGSELENQIGDWVINQALKQIVEWQKLGIFME----VSVNIASYHLLSA 994 Query: 113 --------ALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCE-----FG-PLWLD 158 AL P + Q +L+ E++E L +T ++ G + LD Sbjct: 995 KFLTLLESALASHPNLDAQ-----YLQLEILESSALGDLNTIRNILNTCRDVLGVNIALD 1049 Query: 159 DFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE 218 DFGTG ++ + L + + IKI + + P+ + +L L + + R VI EGVE Sbjct: 1050 DFGTGYSSLTHLKNLPANTIKIDQNFVKNMLDDPDDYAIIKGVLALADSFNREVIAEGVE 1109 Query: 219 TPEEWRDVQNSPAFAAQGWFLSRPAP 244 T E + + +AAQG+ ++RP P Sbjct: 1110 TTEHGLMLLSMGCYAAQGYGIARPMP 1135 >UniRef50_D0YY24 Putative uncharacterized protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YY24_LISDA Length = 511 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 31/235 (13%) Query: 34 WQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQ-IDLLAQK 91 +QPI R ELL HP + +PPD++ I ++ R E++ + +DL+ Q Sbjct: 269 YQPIISAKNNRWCGAELLVRWNHP--KAGLIPPDQF---IHIAERSELIHQMTLDLIKQI 323 Query: 92 A--DFFIE----HGLLASVNIDGPTLIALRQQPKILRQIERL-PWLRFELVEHIRLPKDS 144 A +IE H S+N+ P++IA Q L QI ++ P L+ LV I L + Sbjct: 324 ALQKTYIEQLVPHSYF-SINMT-PSMIANTQFVTKLVQILQMNPDLQHGLV--IELTERE 379 Query: 145 TFAS------------MCEFGPLW-LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQS 191 F+ + +G W LDDFGTG + + L ++ +D +KI R + Sbjct: 380 PFSPAKLLKLKQGMDLLRSYGVKWALDDFGTGYSGLATLQQLSFDILKIDRTFINLSSND 439 Query: 192 PEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 ++ + + ++ ++ EGVET E+ + + A QG++ ++P + Sbjct: 440 AISLSILDNIAQMGHKLHCSLVAEGVETKEQAQYAKKIGIEACQGYYYAKPMTFD 494 >UniRef50_D1T1F1 Response regulator receiver modulated diguanylate phosphodiesterase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T1F1_9BURK Length = 410 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Query: 152 FGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRG 211 FG L +DD+GTG ++ LS + + +KI R + R + L L R Sbjct: 298 FG-LSIDDYGTGFSSLQQLSRIPFSELKIDRSFVHGAHRRKSLRVILESALDLARRLNLS 356 Query: 212 VIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 + EGVE E+WR +Q+ +AQGW +++ P E L T Sbjct: 357 TVAEGVEHLEDWRLLQDFGCTSAQGWLIAKAMPGEDLPT 395 >UniRef50_Q5FQJ2 Sensory box/GGDEF family protein n=1 Tax=Gluconobacter oxydans RepID=Q5FQJ2_GLUOX Length = 587 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 52/95 (54%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + +DDFG G ++ + L +D IKI R + P+ +++ S ++ L + VI Sbjct: 470 IVMDDFGIGFSSLNYLRSFPFDRIKIDRSFIRDMLNDPQAQSIVSAIMTLGHAMSMEVIA 529 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 EGVET + ++++ AQG+ + RPAP+ L+ Sbjct: 530 EGVETAAQLDMLRHTSCSTAQGFLMGRPAPLANLS 564 >UniRef50_Q11KT0 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Chelativorans sp. BNC1 RepID=Q11KT0_MESSB Length = 730 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 42/267 (15%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQR 62 RQV + N A+ E LQ +QP+Y + E L HP++ S Sbjct: 478 RQVEADLRNALANGEELQ-----------LFYQPLYSDASEITGAEALLRWKHPVHGS-- 524 Query: 63 LPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTL------IALRQ 116 + P + V E+ ++ Q D+ + +V D P + + LR Sbjct: 525 MSPVFLIS----------VAEESGMIMQLGDWVLREACRMAVKADIPLMSVNVSAVQLRD 574 Query: 117 QP------KILRQIERLP-WLRFELVEHIRLPK-DST---FASMCEFG-PLWLDDFGTGM 164 + I+RQ P ++ E+ E + + D T F ++ E G + +DDFGTG Sbjct: 575 EHFAERCLAIIRQENVAPERIQLEVTETVLIENPDLTVRIFETLREAGIRIAIDDFGTGY 634 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L D +KI R L +S +GR + +L + V+ EGVET ++ + Sbjct: 635 SSMSYLRNYPVDRLKIDRSFVQALSESKQGRAIVGAMLDIARALELDVVAEGVETVDQCK 694 Query: 225 DVQNSPAFAAQGWFLSRP-APIETLNT 250 +++ QG+ SRP P++ L++ Sbjct: 695 VLRSLGCREMQGYLFSRPLEPLQFLHS 721 >UniRef50_A4FDX2 PAS:GGDEF n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FDX2_SACEN Length = 914 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Query: 146 FASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHL 204 +S+ E G L +DDFGTG ++ + L + D +KI R L S E R + + ++ + Sbjct: 807 LSSLRELGVRLAIDDFGTGYSSLAQLRRLPLDTLKIDRSFVTDLDSSEELRVMINSIVAM 866 Query: 205 MNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 + V+ EGVET + + AQG++L RP PIE L Sbjct: 867 AHAVGLDVVAEGVETARQLDLLGEVGCDQAQGFYLGRPGPIERL 910 >UniRef50_B5IX41 Cyclic diguanylate phosphodiesterase domain protein n=2 Tax=Octadecabacter antarcticus RepID=B5IX41_9RHOB Length = 644 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 27/231 (11%) Query: 34 WQP-IYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEIT---------VSHRMEVVKE 83 +QP I+ G+++ E L HP ++ P + +I S +VV++ Sbjct: 407 YQPKIHLPTGQIIGFEALARWNHPTLGTRG--PSEFLDQINELGLQGDFMTSMATQVVRD 464 Query: 84 QIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLP----WLRFELVEHIR 139 LL + D G + S+N+ TL + + R I P L E+ E + Sbjct: 465 IETLLGRGYD----PGQV-SLNLSEVTLATHSGRQDLHRIIAANPTAAQHLTLEITEDVF 519 Query: 140 LPK--DSTFASMCEFGPLW----LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPE 193 + + D+ AS+ F L LDDFGTG A+F L ++ +D +KI L Sbjct: 520 IARAADAIQASIASFHDLGVRISLDDFGTGFASFHHLRQLDFDELKIDTSFVAGLGHDST 579 Query: 194 GRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 L L++ + VI EGVET + +D+ N AQG+ S P Sbjct: 580 SEVLVRGFLNIASGLGVSVIAEGVETDAQSQDLINMGCVVAQGYLFSPAVP 630 >UniRef50_B1JAX5 Diguanylate phosphodiesterase with GAF sensor(S) n=1 Tax=Pseudomonas putida W619 RepID=B1JAX5_PSEPW Length = 592 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 49/94 (52%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG +N++ LS + +K+ R L S + L L+ L N+ V+ EG Sbjct: 487 IDDFGTGYSNWAYLSRIPATLVKLDRSLIQKATHSAKDLLLVQSLVGLANQLGYQVVAEG 546 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 +ET E+ + AQG++L+RP P+ T Sbjct: 547 IETAEQLTCAKAWGCTQAQGYYLARPMPLAAFQT 580 >UniRef50_B8H226 CHASE4-family GGDEF/EAL protein n=2 Tax=Caulobacter vibrioides RepID=B8H226_CAUCN Length = 735 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 28/249 (11%) Query: 18 SLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHR 77 +L++ W+ +QP G+++ VE L THP + + P + + ++ Sbjct: 489 ALKDGGVWV------AYQPQVDAAGKVLGVEALARWTHPEKGA--ISPGAF---VPLAED 537 Query: 78 MEVVKEQIDLLAQKA--DFFIEHGLLASVNIDGPTLIALRQQ--PKILRQI-----ERLP 128 ++ E L+ ++A D L +VN+ + + +RQ P ++ QI R Sbjct: 538 CGLIDELGRLIMRRAFTDSLRWKDLKVAVNV---SALQMRQAGFPDLVAQILAETGARAE 594 Query: 129 WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARE 183 + E+ E L D + + E G L LDDFGTG ++ S L D IKI R Sbjct: 595 KIELEITEGALLGDDEATHDAISRLREMGFSLALDDFGTGYSSLSYLRRYPIDKIKIDRS 654 Query: 184 LFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPA 243 L E + + ++ L VI EGVET ++ + AQG+ S Sbjct: 655 FITPLGGDKEAGAVVAAIVRLAKALKLSVIAEGVETNQQREQLHEIGCVQAQGFLFSAAL 714 Query: 244 PIETLNTAV 252 + ++T V Sbjct: 715 AADAIDTIV 723 >UniRef50_B1YEJ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YEJ2_EXIS2 Length = 878 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 49/92 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++ S L++ D +KI RE ++ + G ++ S ++HL VI EG Sbjct: 783 IDDFGTGYSSLSRLADFPIDTLKIPREFVEKIQPATTGYSMISSIIHLAKSLHLEVIAEG 842 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 VET E+ + QG++ RP P E + Sbjct: 843 VETLEQVNVLNRLECSRMQGYYFGRPMPAEQI 874 >UniRef50_A1SBP6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Shewanella amazonensis SB2B RepID=A1SBP6_SHEAM Length = 502 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%) Query: 128 PWLRFELVEHIRLP---KDSTFASMCEFGPLW--LDDFGTGMANFSALSEVRYDYIKIAR 182 P++R E+ E L K S + + +DDFGTG + + L ++ D IKI R Sbjct: 362 PFVRIEITETATLTDMHKSVEIISNLQASGITFSIDDFGTGYTSLAMLKDLTVDEIKIDR 421 Query: 183 ELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + Q RT+ S ++ + + ++ EGVE + + +Q+ AQG++L RP Sbjct: 422 SFVSGVEQDERSRTIVSAIVAMAQSFDIHIVAEGVENAAQLKILQDMGCQQAQGYYLGRP 481 Query: 243 APIETL 248 + L Sbjct: 482 MALHDL 487 >UniRef50_C1RLP6 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RLP6_9CELL Length = 580 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 9/155 (5%) Query: 103 SVNIDGPTLIALRQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFGP 154 VN+ G L+ ++L ++ W E+ E + D A++ G Sbjct: 413 GVNVSGRELVGQDYAARVLAALDAADWPTTQFVLEVTESVVEASDPAALRALATLRASGV 472 Query: 155 -LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVI 213 + +DDFGTG ++ S L E+ D++K+ R+ L S + LL L V+ Sbjct: 473 RVAIDDFGTGYSSLSRLDELPADFLKLDRQFLTSLPTSTRRTGMVRALLDLCAELGMHVV 532 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 EGVET E+ ++ +AQG+ RP P+ L Sbjct: 533 AEGVETAEQAAMLEELGCHSAQGYHYERPLPVAAL 567 >UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNA1_9PROT Length = 650 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 5/125 (4%) Query: 129 WLRFELVEH--IRLPKDST--FASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARE 183 WL E+ E+ +R PKD+ + E G + +DDFGTG ++ S L ++ D +KI + Sbjct: 517 WLELEITENDVMRKPKDAAVKLKEISELGIKIAIDDFGTGYSSLSYLKKLPIDKLKIDQS 576 Query: 184 LFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPA 243 + S + + ++ + VI EGVET E+ V + QG++ SRP Sbjct: 577 FIRDIPGSEDDNAIVKAVIAISKSLNLDVIAEGVETKEQRDFVLENGCSKIQGYYYSRPL 636 Query: 244 PIETL 248 P E + Sbjct: 637 PAEGI 641 >UniRef50_C0QQR2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QQR2_PERMH Length = 687 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 24/246 (9%) Query: 18 SLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSH 76 +L+++ F+L +QPIY ++++VE L + + +PP + + + Sbjct: 443 ALEKKEFYL------VYQPIYDINTEKIVSVEALLRWKNA--EGEHIPPSDFIPILEETG 494 Query: 77 RME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLI----ALRQQPKILRQIERL 127 ++ V++E L + I+ + SVNID ++ + I ++ + Sbjct: 495 LIKEVGRWVIEEVCKQLKRWNSLGIKD-ITISVNIDIQQILEENFVKTVESIISKECKTF 553 Query: 128 PWLRFELVEH--IRLPKD--STFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAR 182 L+FE+ E ++ P+ T ++ G + +DDFGTG ++ S L + YIKI R Sbjct: 554 SSLKFEITESEAMKFPETVIQTLKNLNSIGIEISIDDFGTGYSSLSYLKTMPVAYIKIDR 613 Query: 183 ELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 L + + R L ++ L + VI EGVET E+ ++ QG++ RP Sbjct: 614 SFIKDLPEDKDDRILTKAIVELSKNFGYKVIAEGVETEEQLIYLKEIKCDMVQGFYFCRP 673 Query: 243 APIETL 248 P + L Sbjct: 674 LPADEL 679 >UniRef50_A4WA59 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Enterobacter sp. 638 RepID=A4WA59_ENT38 Length = 720 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 26/262 (9%) Query: 8 RISNPEASIESLQERRFWLQCERAYT---------WQPIYQT-CGRLMAVELLTVVTHPL 57 RI+ +A + S +ER+ ++ E +QPI ++ +VE L V P Sbjct: 455 RITQYDAELNSARERQLAIENEIRDGMERDEFDVWYQPIIDARSQKMTSVEAL--VRWPR 512 Query: 58 NPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIE--HGLLASVNIDGPTLIALR 115 P+ L PD + I+++ ++ + ++A +E L SVNI Sbjct: 513 RPAGELTPDEF---ISIAETSGLIYSLGQFVLRRACHDLEPFSDLKLSVNISPAQFRDPE 569 Query: 116 QQPKILRQIE--RLPW--LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 + K+ + IE R P L+ E+ E L + A++ G + LDDFGTG ++ Sbjct: 570 FEEKVAKVIEMTRFPANRLQLEVTETYVLENPERARAAIANLKALGTAVALDDFGTGYSS 629 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L +D IKI + L ++ + L S + + + V+ EGVE ++ + + Sbjct: 630 IGYLRRFNFDTIKIDKSLAGLVDNDEQAIALVSGTVRIASALGMAVVAEGVENEKQMKLL 689 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + + QG++ SRP PIE + Sbjct: 690 RLAGCDQLQGFWFSRPMPIEAI 711 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 47/90 (52%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ S L + D +KI R + + + ++++ VI Sbjct: 832 LSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIA 891 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 EGVET E+W+ + AAQG+ L++P P Sbjct: 892 EGVETIEQWKFLDREGCHAAQGYLLAKPVP 921 >UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6AJG8_VIBHA Length = 501 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Query: 146 FASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHL 204 F S+ E L +DDFGTG ++ S L + R+D +KI + M+ + LL L Sbjct: 391 FHSLSEHDVSLAIDDFGTGHSSLSYLRQFRFDILKIDQSFVQMIGNDSVSAHIVENLLDL 450 Query: 205 MNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 +R I EGVET E+ +++ QG++ ++P P++ Sbjct: 451 ASRLGMKTIAEGVETAEQAEYLRSHNIDCLQGYYFAKPMPLK 492 >UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2C3_NITSB Length = 765 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 5/121 (4%) Query: 130 LRFELVEHIRLPKDSTFASMCE----FG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L E+ E + + S +M E G + LDDFGTG ++ + L + +D IKI + Sbjct: 633 LELEITETLSMENVSHTVNMLEAIKQIGFQVALDDFGTGYSSLNYLKRLPFDTIKIDKSF 692 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + + PE + + + + + +I EGVET ++ R +++ F AQG+ ++P P Sbjct: 693 IDDIDKDPEDYQITKIITDIAYTFRKEIIAEGVETKQQERILKDLKCFYAQGYLYAKPLP 752 Query: 245 I 245 + Sbjct: 753 L 753 >UniRef50_B2UXQ0 Putative signaling protein n=3 Tax=Clostridium botulinum RepID=B2UXQ0_CLOBA Length = 751 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%) Query: 154 PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVI 213 + LDDFGTG+++ + L ++ D IK+ RE S +G + + ++ ++ VI Sbjct: 639 SISLDDFGTGLSSLNILKDLPIDTIKLDREFLNSKDSSKKGEIVIANIVRMVKELDLNVI 698 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 EGVET E+ + AQG+ +RP P++ L L Sbjct: 699 CEGVETYEQAEFLSEVGCNNAQGYLYARPMPVKVFEEKELTL 740 >UniRef50_D0KZ53 Diguanylate phosphodiesterase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZ53_HALNC Length = 262 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 45/89 (50%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + LDDFG G A + L E+R D IK+ L + + + + + GV+ Sbjct: 164 IALDDFGEGYAGLNHLIEIRPDVIKLDLNLIRNIDHDAGRQAVVRATVSMCKELGIGVVA 223 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPA 243 EGVET EEW ++ S F QG+ SRPA Sbjct: 224 EGVETLEEWSCLEASGVFLYQGYLFSRPA 252 >UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=RTN_ECOLI Length = 518 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 17/227 (7%) Query: 34 WQPIYQTCG-RLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEV--VKEQIDLLAQ 90 +QP+ T R+ +E+L HP+ + +PPD F S +M V + +L+A+ Sbjct: 281 YQPVVDTQALRVTGLEVLLRWRHPV--AGEIPPDA-FINFAESQKMIVPLTQHLFELIAR 337 Query: 91 KA---DFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIR-----LPK 142 A + + G+ +NI L + + I + + LP F++V I + Sbjct: 338 DAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ 397 Query: 143 DST--FASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFS 199 ++T FA + G + +DDFGTG + L DY+KI R + + Sbjct: 398 EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLD 457 Query: 200 QLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 +L L R + EGVETPE+ R + QG+++SRP P++ Sbjct: 458 AVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 51/96 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFG+G ++ S L +D IKI R + L ++P+ + ++ L + ++ EG Sbjct: 792 MDDFGSGYSSLSYLQAFPFDKIKIDRAFVMNLGRNPQSAAIIRAVIGLGHGMNMSIVAEG 851 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 VETPE+ + + QG+ L +P PI+ + V Sbjct: 852 VETPEQLGFLAEQGCDSVQGYLLGKPLPIDKYDGIV 887 >UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2I6_METRJ Length = 819 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 44/96 (45%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG A+ + L +D +KI R L P+ + +L L GV+ EG Sbjct: 703 MDDFGTGYASLATLQAFPFDKLKIDRSFVAQLGTGPQAAVIVRAVLSLGRSLGMGVVAEG 762 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 VET + + + QG+ RP PI AV Sbjct: 763 VETHAQMKFLTEEACGEMQGYLFGRPRPITDYAAAV 798 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 51/97 (52%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG ++ + L + D++KI + L + + TL ++ + ++ VI EG Sbjct: 909 LDDFGTGYSSLAYLKKFDIDFLKIDQSFTRNLDSNSDDFTLCEAIIVMAHKLGMKVIAEG 968 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 VET + + + N+ QG+ SRP P+E A L Sbjct: 969 VETDYQRKILANAGCDFGQGYLFSRPVPVEKFEQAFL 1005 >UniRef50_C9QJS2 Response regulator VieA n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QJS2_VIBOR Length = 390 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 25/223 (11%) Query: 42 GRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLL 101 G ++ VE L HP L PD + + + R + E +D++ A ++ GLL Sbjct: 166 GTVVGVEALARWRHP--TLGILTPDVF---LPIVERCNLSCELLDIVVNNAFKDMKAGLL 220 Query: 102 ---ASVNIDGPTLIALRQQPKILRQ-IERLPW-------LRFELVEHIRLPKDST-FASM 149 S+N+D L +QP IE+ L E+ E K+++ F ++ Sbjct: 221 PRNVSINVDQFNL----EQPYFADSLIEKCNQSNIDPARLTIEITEEYAYKKNTSLFKNL 276 Query: 150 CEFG----PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLM 205 + + +DDFGTG + L + ++ IKI R + Q + + + + +L Sbjct: 277 AKLRINDINISIDDFGTGHSTLENLYALPFNEIKIDRSFVMNCEQDTKKQKIIKFICNLA 336 Query: 206 NRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 + + V+ EGVE+ E W+ ++ QG+++S+P P+ + Sbjct: 337 SEFKTKVVAEGVESYECWKLLKEINVDICQGYYISKPVPVNEI 379 >UniRef50_Q2B495 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B495_9BACI Length = 677 Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 129 WLRFELVEHIRL----PKDSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARE 183 +L E+ E + + F + + G L +DDFGTG + S L E++ +KI + Sbjct: 537 FLELEITERVAMNDAYSAGDAFMQLLDLGLMLSVDDFGTGYNSLSNLQELQIQRLKIDKT 596 Query: 184 LFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPA 243 + + L + ++ + + EGVETPE+ + AQG++ SRP Sbjct: 597 FIQQMESDEHNKALVASIVSMGKHLGMQITAEGVETPEQLSFLMEIGCDEAQGFYFSRPK 656 Query: 244 PIETLNTAVLA 254 PIE + + A Sbjct: 657 PIEQIMNTINA 667 >UniRef50_C9Y2Q8 Cyclic di-GMP regulator cdgR n=2 Tax=Cronobacter RepID=C9Y2Q8_CROTZ Length = 239 Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 5/207 (2%) Query: 34 WQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKAD 93 + PI T G + +E++ T LN R P + I R+ + E+I L+ + + Sbjct: 15 FAPIAHTSGGPLGMEVIAHFTS-LNAQVRFPTEFIIPRINPEERLMLFYEKISLIEKWRE 73 Query: 94 FFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHI----RLPKDSTFASM 149 FI++ L A VNID A+ P + ++ +LP+L + E+ + ++ T S+ Sbjct: 74 AFIKNSLFAVVNIDHKIANAILSSPTLRARLAQLPFLELGINENFPELNKGKENKTMFSL 133 Query: 150 CEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYC 209 + PL L +FG G A A+ + + + + + R + + + C Sbjct: 134 SRYFPLMLCNFGAGAATGRAIFDGLFRRVALDKTFVQKRRAGGMFEPFMYAIANQVGPCC 193 Query: 210 RGVIVEGVETPEEWRDVQNSPAFAAQG 236 + +I+ V+ E + + AQG Sbjct: 194 QTLILPAVDNDEALDEARRLGFNGAQG 220 >UniRef50_A0KL96 Response regulator n=2 Tax=Proteobacteria RepID=A0KL96_AERHH Length = 402 Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 152 FGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRG 211 FG + +DD+GTG ++ LS + IKI +E SP+ + + + + + Sbjct: 295 FG-IAMDDYGTGYSSMKQLSRCPFTEIKIDKEFVHDAHSSPKKLAILTSAIVMSQKLNLK 353 Query: 212 VIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 + EGVET E+W+ + AQG+++SRP P++ + Sbjct: 354 TVAEGVETEEDWKQLALLGCELAQGYYISRPLPVDQI 390 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 94/228 (41%), Gaps = 22/228 (9%) Query: 34 WQPIYQTCGRLMAVELLTVVTHP----LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLA 89 +QP GR++ E L HP ++P Q +P I R V++E LA Sbjct: 698 YQPQTANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRW-VLEEACGQLA 756 Query: 90 QKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERL--------PWLRFELVEHIRLP 141 AD +VN+ +QP+ + +I R+ L+ EL E I + Sbjct: 757 AWADLPAAGNCKLAVNVSARQF----RQPEFVAEIRRILAATGADPKLLKLELTESIVMT 812 Query: 142 K-DSTFASMCEFGPLW----LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRT 196 + T + M E L +DDFGTG ++ + L + + +KI R L P Sbjct: 813 ELADTVSKMQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDA 872 Query: 197 LFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + ++ + VI EGVET E+ + A QG+ SRP P Sbjct: 873 IVETIIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVP 920 >UniRef50_Q3SJ51 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJ51_THIDA Length = 738 Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 10/153 (6%) Query: 103 SVNIDGPTLIALRQQPKILRQIERLP----WLRFELVEHIRLP----KDSTFASMCEFG- 153 +VN+ L++ P +L +ER ++ E+ E I L + + + G Sbjct: 568 AVNVSKRQLMSPDFYPTLLATVERFGVHPRQIKLEITESIALEGIERARALLQRLSDAGF 627 Query: 154 PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVI 213 L LDDFGTG ++ S + E+ +D IKI FV ++PEGR L ++ + + ++ Sbjct: 628 TLSLDDFGTGFSSLSHVHELPFDEIKIDIS-FVRRIKTPEGRVLVKTIVDMGHAMRLALV 686 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 EGVE E +Q QG+ SRP P E Sbjct: 687 AEGVEDSETAAILQGMGVEMLQGYHFSRPMPKE 719 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 9/151 (5%) Query: 103 SVNIDGPTLI----ALRQQPKILRQIERLPWLRFELVEH--IRLPKDS--TFASMCEFG- 153 S+N+ G L + R Q IL+ + EL E + P+ S F + E G Sbjct: 650 SINVSGKQLARANWSHRVQATILQYGINPEEIELELTESSIMENPEKSIEAFEYLSELGI 709 Query: 154 PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVI 213 + +DDFGTG ++ S L ++ D IKI R V L + + R + ++++ + VI Sbjct: 710 KVSIDDFGTGYSSLSYLKKINADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVI 769 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 EGVE P + + + QG+ S+P P Sbjct: 770 AEGVENPAQRDLLHDLGCHMIQGYLYSKPLP 800 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Query: 152 FG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCR 210 FG + +DDFGTG ++ + L +D IKI R + SP+ + +L L Sbjct: 585 FGVSIAMDDFGTGYSSLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSLGM 644 Query: 211 GVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 V+ EGVET + R + AQG+ +S+P PIE Sbjct: 645 SVVAEGVETDAQMRFLAAEACDEAQGYLISKPQPIE 680 >UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Photobacterium profundum RepID=Q1YXX2_PHOPR Length = 725 Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 13/150 (8%) Query: 116 QQPKILRQIERL--------PWLRFELVEHIRLPK-DSTFASMCEFGPLWL----DDFGT 162 P +L I R+ +L E+ E + +S ++ +F L + DDFGT Sbjct: 572 NDPDLLENIRRIIRNVGIDARFLEIEITESTLMENVESAIYTLRQFKELGITVAIDDFGT 631 Query: 163 GMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEE 222 G ++ + L + D +KI R L + + + L+ + + VI EG+ET E+ Sbjct: 632 GYSSLAMLKRLPVDKLKIDRSFVKDLDSNNSDQKIVQALISMAHTLQISVIAEGIETQEQ 691 Query: 223 WRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 + +Q QG+ SRP PI LN A+ Sbjct: 692 FNLLQQYGCDFGQGYLFSRPVPITELNGAM 721 >UniRef50_B9Z336 Response regulator receiver modulated diguanylate phosphodiesterase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z336_9NEIS Length = 369 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Query: 152 FGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRG 211 FG L +DD+GTG ++ LS + + +KI R Q R + L + ++ Sbjct: 257 FG-LSIDDYGTGFSSMQQLSRIPFTELKIDRSFVHRAHQREHLRVILQSALDMAHKMSLV 315 Query: 212 VIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 + EG+ET E+W+ ++ AQG+F+++P P ET Sbjct: 316 TVAEGIETLEDWKLLREFGCNLAQGYFIAKPMPSETFT 353 >UniRef50_A8RTD5 Putative uncharacterized protein n=3 Tax=cellular organisms RepID=A8RTD5_9CLOT Length = 898 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 48/90 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGT N S LS V +D +K+ + + + +P+ + + + + + V+ EG Sbjct: 802 LDDFGTEYVNLSLLSSVEFDVLKLDKTMVDDMVNNPKAQAIIESIAGICKKMGIRVVAEG 861 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 +ET E+ ++ AQG+ SRP P+E Sbjct: 862 IETEEQMSVLRTCGVETAQGYLFSRPIPVE 891 >UniRef50_Q2RWN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWN2_RHORT Length = 766 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 46/92 (50%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L LDDFGTG ++ S L + D +KI R L + + R + ++ L + + Sbjct: 644 LALDDFGTGYSSLSYLRSLPIDTLKIDRSFVSGLAEQADMRKIVGLIIGLGHELGFDITA 703 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 EGVET EE R V F AQG+ S+P E Sbjct: 704 EGVETEEEARIVTEMGCFTAQGYLFSKPLSAE 735 >UniRef50_B9ZKL4 Diguanylate phosphodiesterase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKL4_9GAMM Length = 371 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDD G G A+ + LS++R D++KI REL + + + +++ L +I EG Sbjct: 275 LDDLGAGYASLNMLSQLRPDFVKIDRELVSGIDGDVYQQKILGKVVELARELDVQIIAEG 334 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPA 243 +ETP EWR +++ + QG+ +RPA Sbjct: 335 IETPGEWRWLKDQVDY-CQGYLFARPA 360 >UniRef50_A6G0E1 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0E1_9DELT Length = 714 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%) Query: 100 LLASVNIDGPTLIALRQQPKILRQIER------LPW--LRFELVEHIRLPK-DSTFASMC 150 L SVN+ + PK+L ++ LP L+ EL E + L + D A + Sbjct: 551 LAVSVNLSAKQV----ADPKLLETVDNALQESGLPGRCLKLELTESVMLDRADEVMALLQ 606 Query: 151 EFGP----LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMN 206 + +W+DDFGTG ++ S L D +K+ R L S E T+ +L+L + Sbjct: 607 DIRDRGIEIWIDDFGTGYSSLSYLHRFPVDGLKVDRSFVSQLDGSEESETMVRTILNLAS 666 Query: 207 RYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 V+ EG+ET + + QGW +R P+E + Sbjct: 667 NMQLRVVAEGIETEVQAEQLTRLGCGLFQGWLFARSLPVEKV 708 >UniRef50_C4DQQ0 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQQ0_9ACTO Length = 672 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 45/93 (48%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L LDDFGTG ++ L ++ +KI + + +++ P+ + ++ L V+ Sbjct: 552 LSLDDFGTGFSSMKHLRSLQVSEVKIDKSFVLGMKEDPDAVAIVKSIIELGRALSLRVVA 611 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIET 247 EG+E WR + QGWF +RP P E Sbjct: 612 EGIEDEATWRHLVTLGCDTGQGWFHARPMPAEA 644 >UniRef50_C1D4L3 EAL domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4L3_LARHH Length = 239 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 51/94 (54%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ S LS+++ +KI R+ L +S ++ L + V V Sbjct: 2 LAIDDFGTGYSSLSRLSQMKVTTVKIDRDFVHSLYKSNFNYAFVESIIRLCHSINMKVCV 61 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 EGVE+ E+++D+ A QG+F+S+P E Sbjct: 62 EGVESFEQFKDIFGMRADKIQGYFVSKPLKKEVF 95 >UniRef50_B4REU2 Diguanylate phosphodiesterase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4REU2_PHEZH Length = 771 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 21/258 (8%) Query: 8 RISNPEASIESLQE-RRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNPSQRLPP 65 ++ +P ++ + + RR E A +QP ++ GR+ VE L THP + P Sbjct: 508 KVGDPSLNLALMSDMRRGLAAGELALHYQPKVHAKSGRVTGVEALVRWTHPSRGP--IAP 565 Query: 66 DRYFTEITVSHRMEVVKE------QIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 D + + + + E DL A A H L +VN+ L + + Sbjct: 566 DLLISTAEETGMIRALTEWGIAQAVADLGALGAG---GHDLTVAVNVSAGLLADRTFRER 622 Query: 120 ILRQIE-RLPWLRFELVEH--IRLPKDSTFASMCEFGPLWL----DDFGTGMANFSALSE 172 + R L E+ E IR P D ++ EF L DD+GTG+++ S L Sbjct: 623 LTRAAAGHANRLCLEITESAIIRNP-DEAMRAIAEFRAAGLKIAIDDYGTGLSSLSYLKL 681 Query: 173 VRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAF 232 + D +K+ + L + S R + + L + V+ EGVET + Sbjct: 682 IEADELKLDKSLVAAVNDSARDRLILKSTVDLAHSLGMSVVAEGVETRSVLAALAAMGCD 741 Query: 233 AAQGWFLSRPAPIETLNT 250 QG+ +S+ PI L+ Sbjct: 742 VVQGYLVSKALPIGELHA 759 >UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein (Fragment) n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHA2_9CELL Length = 721 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 50/100 (50%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ S+L E+ +KI R ++ SP L ++ + R+ VI Sbjct: 611 LHVDDFGTGHSSLSSLHELPVGALKIDRSFVQRMQTSPRSHELVGLMVTMGTRFGLDVIA 670 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 EG+ET EE + AQG+ SRP P +LA Sbjct: 671 EGIETEEEAAALSRLGCPYAQGYLFSRPLPATEATALLLA 710 >UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NWP7_AZOSE Length = 728 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 42/263 (15%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNPSQ 61 R++++RI + +L ER F L +QP + GR++ VE L P Sbjct: 450 RELVERIEH------ALSEREFLL------FYQPKVDLRRGRVIGVEALIRWQDP--DRG 495 Query: 62 RLPPDRYFTEITVSHRMEVVKEQID---LLAQKADFFIEHG----LLASVNIDGPTLIA- 113 LPP + +I + +V ++ID L A + H L SVN+ G +L Sbjct: 496 LLPPSAFLPQI----QNHLVSQKIDQWVLSEAVAQLMLWHAIGLDLSISVNVSGLSLQTH 551 Query: 114 ---------LRQQPKILR---QIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFG 161 L P+I R +IE L + + +EHI A F LDDFG Sbjct: 552 DFMNTLAKLLAAHPEINRSRLEIEVLETVALDDIEHISGIISRRQAEGIRFA---LDDFG 608 Query: 162 TGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPE 221 TG A+ L + D +KI + + E R + ++ L + R V+ EGVET E Sbjct: 609 TGYASLRYLKHLPADVLKIDQSFVRDMLNDEEDRVIVEGVIGLSRAFKREVVAEGVETLE 668 Query: 222 EWRDVQNSPAFAAQGWFLSRPAP 244 + + AQG+ ++RP P Sbjct: 669 HYLCLMELGCDFAQGFGIARPMP 691 >UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 Tax=Proteobacteria RepID=A6V697_PSEA7 Length = 858 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 32/229 (13%) Query: 34 WQPIYQTC-GRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 +QP Y+T G + + E L HP + PD + + E+ DL+ Q Sbjct: 616 YQPRYRTEEGSIASAEALIRWHHPRRG--MIGPDEFIG----------LAEESDLIVQIG 663 Query: 93 DFFIEHGLLASVNIDGPTLIALRQQPKI---------LRQIERLPWL-----RFELVEHI 138 ++ + ++ + G ++++ P +R+ RL L E+ E++ Sbjct: 664 NWVLRQACSSAASWPGEVMVSVNVSPAQFISGDIVWQVREALRLAHLDARRLELEVTENV 723 Query: 139 RLPKDS----TFASMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPE 193 L T ++ E G L +DDFGTG ++ L +D IKI + + ++ Sbjct: 724 MLNDVDGALRTMTALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFIANMEKTGR 783 Query: 194 GRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 R++ +++L N V EGVET + R +++ QG+ LSRP Sbjct: 784 DRSIVQAIINLGNALNLRVTAEGVETEGQMRILRDEKCHELQGFLLSRP 832 >UniRef50_A4TD28 Diguanylate phosphodiesterase n=1 Tax=Mycobacterium gilvum PYR-GCK RepID=A4TD28_MYCGI Length = 447 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 51/100 (51%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DD G+G A + + +R D IK+ REL V + P R L + L H + Sbjct: 346 LAIDDAGSGFAGLTTILRLRPDIIKLDRELTVGIDTDPSRRALATALTHFAREIDAYTVA 405 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 EG+ET + + +++ QG+FL RP P++ ++ + Sbjct: 406 EGIETEVQMQLLRDIGIRYGQGYFLGRPQPVDVFEESLFS 445 >UniRef50_D0IKD2 Rtn protein n=7 Tax=Vibrio RepID=D0IKD2_9VIBR Length = 817 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 51/96 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++FS L+E ++DY+KI RE + + + L + V+ EG Sbjct: 569 IDDFGTGFSSFSYLTECQFDYLKIDREFVSGIELGSRRYAIVKMMTDLAHTLEVKVVAEG 628 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 VET E +++ QG+F ++P PI L A+ Sbjct: 629 VETEYEVHVLRSLGVDLLQGFFFAKPLPISRLIHAM 664 >UniRef50_A3UF66 Putative phosphodiesterase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UF66_9RHOB Length = 236 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%) Query: 130 LRFELVEHIRLPKDSTFA----SMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 + FE+ EH + FA S + G LDDFG+G A + L+ V D IK+ L Sbjct: 102 IMFEMTEHEAVTDPDHFAMIVRSYKDMGFTTALDDFGSGGAGLTLLASVMPDIIKLDMAL 161 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + SP RT+ S L+ + +++ +I EG+E E R + + QG++ SRP Sbjct: 162 VRNVHISPVKRTILSALVEICDKFGIRIIAEGIEVKAEARALLDLGITLFQGYYFSRP 219 >UniRef50_Q1YLA3 Signal transduction protein family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YLA3_MOBAS Length = 467 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG ++ S L E R+D +KI R + Q+ +T+ ++ L + V+ EG Sbjct: 346 LDDFGTGFSSLSYLVEYRFDKLKIDRSFVSAISQAGSAQTVVQAVIRLGHALGMEVVAEG 405 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 VET + ++ + QG+F SRP P + L Sbjct: 406 VETVTDSVTMRFWGSDHLQGYFFSRPLPADEL 437 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 24/234 (10%) Query: 34 WQPIYQTCGR-LMAVELLTVVTHP----LNPSQRLPPDRYFTEITVSHRMEVVKEQI-DL 87 +QPI R L+ E L HP ++P+ +P T + + V++E + Sbjct: 1174 YQPIVSLMNRNLLGFEALVRWIHPEKGVISPANFIPVAEE-TGLIIPLGEWVLRESCRQM 1232 Query: 88 LAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERL--------PWLRFELVEHIR 139 A + F L SVN+ G L QQP ++ +I+ + L+ E+ E + Sbjct: 1233 KAWQEQFIGAENLRVSVNLSGKQL----QQPNLINRIDNILTETGLEGKNLKLEITESML 1288 Query: 140 LPKDSTFASM-----CEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEG 194 + + + + + +DDFGTG ++ S L + D +KI R + Q E Sbjct: 1289 MNNKEQVSELLLQMKAKKIQVSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGEN 1348 Query: 195 RTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 + ++ L + V+ EGVET + R +Q QG+F S+P E + Sbjct: 1349 FEIVEAIITLAHHLQMDVVAEGVETEQHLRQLQQLGCEFGQGYFFSKPLESEKI 1402 >UniRef50_C6C7J2 Putative diguanylate phosphodiesterase n=1 Tax=Dickeya dadantii Ech703 RepID=C6C7J2_DICDC Length = 210 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 8/138 (5%) Query: 103 SVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDS----TFASMCEFGPLWLD 158 S+ +D L+ L +L + + +RF + EHI + D + +WL+ Sbjct: 34 SIELDRELLMFLVGNKALLDIVGQTKDIRFLVSEHIDIIGDEQSHRALQLLTSMTKIWLN 93 Query: 159 DFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE 218 +FG G N S L+ V ++YIKI + + + T F ++L +N + +G I+ G++ Sbjct: 94 NFGAGRTNISLLNRVTFEYIKIEKSFLLKYGE----LTFFRKILADINGWSQGAILTGID 149 Query: 219 TPEEWRDVQNSPAFAAQG 236 E +R + QG Sbjct: 150 NDEMYRQFNARDIYGMQG 167 >UniRef50_D1B415 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B415_SULD5 Length = 470 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 8/149 (5%) Query: 103 SVNIDGPTLIALRQQPKILRQIERL---PWLRFELVEHIRLPKDSTFASMCE----FGP- 154 S+N+ + + + IL +++ PW+ FE++E + A+ E +G Sbjct: 317 SINLSYLDMTNIVTKTFILEKLKEFNVGPWVIFEILESDGIENYEAIATFVEEVKAYGAQ 376 Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + +DDFG+G +NF L+E+R DYIKI L L ++ + + + ++ I Sbjct: 377 IAIDDFGSGYSNFERLNELRVDYIKIDGSLIKNLDRNDDTKVIVKNIVRFAQDLGIKTIA 436 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPA 243 E V + + V+ AQG+++ +P+ Sbjct: 437 EYVHSADILACVKELGVDYAQGYYIGKPS 465 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 6/126 (4%) Query: 129 WLRFELVEHIRLPKDSTFASMCEFGPLW----LDDFGTGMANFSALSEVRYDYIKIAREL 184 +L E+ E + L D T + L +DDFGTG ++ S LS+ D +KI + Sbjct: 678 YLELEITESMALNVDYTIRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSF 737 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 L +P+ + + ++H+ + VI EGVET E ++ QG+F S+P P Sbjct: 738 LRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLP 795 Query: 245 IETLNT 250 + +++ Sbjct: 796 TKEIDS 801 >UniRef50_C6ME30 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME30_9PROT Length = 384 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 24/191 (12%) Query: 81 VKEQIDLLAQKADFFIEHGLLAS---VNIDGPTLIALRQQPKILRQIERLPWLRFELVEH 137 + E + L+ Q ++ +A+ + ID P +++ P+ L LP L L E Sbjct: 170 LAESVGLMEQLGKEVLKTACIAAHKLMQIDKPIHVSVNVHPRQLLHGNFLPALSRVLTE- 228 Query: 138 IRLPKDSTFASMCE-------------------FGPL-WLDDFGTGMANFSALSEVRYDY 177 RLP S + E G L LDDFGTG ++ + L E+ D Sbjct: 229 TRLPATSLILEITESAVVSDMAQASVILQQIKALGALIALDDFGTGYSSLTLLRELPIDI 288 Query: 178 IKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGW 237 +KI + L Q+ T+ ++ L ++ EGVE+ + R + + QG+ Sbjct: 289 LKIDKSFIRALDQNINDLTITQAIIGLGVNLGLMIVAEGVESDRQARILLENHCHLQQGY 348 Query: 238 FLSRPAPIETL 248 F SRP P E++ Sbjct: 349 FFSRPVPYESI 359 >UniRef50_Q4KHP6 Response regulator/EAL domain protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHP6_PSEF5 Length = 419 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 33/231 (14%) Query: 34 WQPIYQTCGRLMAVELLTVVTHP----LNPSQRLPPDRY--FTEITVSHRMEVVKEQIDL 87 +QP+ Q G L VE L HP L P + LP + EI H +E E Sbjct: 172 FQPVIQPHGELQGVEALARWQHPERGLLMPGEFLPLIEFAGLQEIFTWHMLEQALE---- 227 Query: 88 LAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERL--------PWLRFELVEHIR 139 LA + H L +VNI I + ++P RQ+E L L E+++ R Sbjct: 228 LAAGVKLVMGHSLPVAVNIP----IGILERPLFPRQLEALLRRFEVPARLLTLEIIDTTR 283 Query: 140 LPKDSTFASM--------CEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQS 191 L D+ C+ L + DFG G + L E+ + +KI + Sbjct: 284 LQTDTAHVEALLRLRMIGCK---LSIGDFGIGGTSLQRLLELPFTELKIPPVFVAGMAAD 340 Query: 192 PEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 L +++ R GV+V G+E+ +++ + A QG FL+ P Sbjct: 341 ERKVALVGGAMNMARRMSLGVVVAGIESEADYKAAKALGAAHLQGCFLAGP 391 >UniRef50_B6A161 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A161_RHILW Length = 721 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 6/145 (4%) Query: 116 QQPKILRQIERLPW-LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSA 169 Q IL Q + P L E+ E + + F ++ G + LDDFG G A+ A Sbjct: 570 QVGDILAQADFDPMRLTIEVTEGVLISNPDQAKRAFKTLRNMGIKIALDDFGCGYASIGA 629 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L E +D +KI R L V L + + L N V EG+ET E+ V+ S Sbjct: 630 LREFGFDRMKIDRSLIVALDHDDRDGAVLHATIALANALHLPVTAEGIETEEQAAAVRLS 689 Query: 230 PAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ SRPA + + A A Sbjct: 690 GCDELQGYLFSRPASADQITQAYFA 714 >UniRef50_B8IW45 Diguanylate phosphodiesterase n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IW45_METNO Length = 328 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 73/179 (40%), Gaps = 27/179 (15%) Query: 80 VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHI- 138 VV +D LA+++ + NI TL ++R+IE WL LV I Sbjct: 82 VVDLVLDALAEESHVIL------GCNISPRTLADADAWAWVMRRIEVRSWLASRLVLEIT 135 Query: 139 -------------RLPKDSTFASMCEFGPLWLDDFGTGMANFSALS--EVRYDYIKIARE 183 RL + C L +DDFG G A L +V +D +KI R Sbjct: 136 ESCLLNELDGVAERLGQAKRLG--CR---LAIDDFGAGFATSVYLQGVDVAWDIVKIDRL 190 Query: 184 LFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 F LR +P GR L L + V+VEG+ET E + + + A QGW P Sbjct: 191 CFADLRNTPSGRVDLCSLFSLARAFAPLVVVEGIETREHFDAARAAGAQYGQGWMFEGP 249 >UniRef50_B5IIK9 Y4lL n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIK9_9CHRO Length = 263 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 4/111 (3%) Query: 148 SMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNR 207 + C F L LDDFGTG A+ + L + ++K+ R L S R L +L + Sbjct: 154 AACGFN-LALDDFGTGYASLAVLRSFPFSHVKVDRSFVADLPHSSRSRALCQVMLQMGEA 212 Query: 208 YCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP---IETLNTAVLAL 255 V EGVET E+ +Q QG+ RP+P +E L TA LAL Sbjct: 213 CGLTVTAEGVETAEQLALLQAMGFSRLQGYLFGRPSPAADVELLLTAPLAL 263 >UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2_SERP5 Length = 538 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 33/247 (13%) Query: 17 ESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHP----LNPSQRLPPDRYFTE 71 ++ R F + C QPI GR + VE+L + ++P +P Sbjct: 276 HAISRREFRVYC------QPIINAETGRCVGVEMLLRWKNKRQGWISPDVFIPLAEQHGL 329 Query: 72 ITVSHR--MEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERL-- 127 I R M V E + L + F+I + A+ + +G T+I I RL Sbjct: 330 IIALTRYLMSTVVENLQLFPPRPSFYISINV-AAEHFNGVTII---------DDIRRLWL 379 Query: 128 -----PWLRFELVEHIRLP--KDSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIK 179 P L EL E L + ++ E G L +DDFGTG ++ S L ++ D +K Sbjct: 380 PAHPMPSLMLELTERTALSEIQYEQIKTLKEMGIMLAIDDFGTGHSSLSYLKKLSPDVLK 439 Query: 180 IARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFL 239 I R + T+ ++ L +R ++ EGVET E+ +++ A QG++ Sbjct: 440 IDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETAEQADYLRSRDVNALQGFYF 499 Query: 240 SRPAPIE 246 ++P PI Sbjct: 500 AKPMPIN 506 >UniRef50_B6R1T0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1T0_9RHOB Length = 972 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%) Query: 134 LVEHIRLPKDSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSP 192 L +H+R+ + T A + + G + +DDFGTG ++ S L +D IK+ R + + + Sbjct: 831 LADHLRVRQ--TLAKLQKSGVKISMDDFGTGYSSLSTLRRFPFDRIKVDRSFVMSMSKDE 888 Query: 193 EGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + + + ++ L N EGVE+ E ++ AQG++ +PAP Sbjct: 889 DAYFIVNSVIDLANSLGIATTAEGVESKEIAEQLKREGCTEAQGYYFGKPAP 940 >UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax=Enterobacteriaceae RepID=C9XYY6_CROTZ Length = 827 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 113/276 (40%), Gaps = 50/276 (18%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M Q++QR + E++++R+F L +QP Y +++AVE L HP Sbjct: 564 MAEQIVQRREMENSLREAIRDRQFQL------VYQPRYDMNAEKIVAVEALLRWHHPTLG 617 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEH----------GLLASVN 105 L P Q +P + E+ L+ +D+ + GL SVN Sbjct: 618 LLMPDQFIP----------------LAEETGLIIAISDWVLNAACRDAQRDMPGLAISVN 661 Query: 106 IDG-----PTLIALRQQPKILRQIERLPW-LRFELVEHIRL--PKDST--FASMCEFGP- 154 I P L+ Q+ L P L E+ E+ L P+ S + G Sbjct: 662 ISAVEFRTPGLVERVQEA--LNATGLAPERLELEVTENATLSNPEQSLELMNGLKALGVR 719 Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ S L +D IK+ + + S ++ ++ L + + Sbjct: 720 LLIDDFGTGYSSLSYLRTFPFDGIKLDKSFVAGMPHSDNANSIVENIIGLGKAFSLSITA 779 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 EGVET E+ ++ QG+ + RP P+E L Sbjct: 780 EGVETQEQLAQLKMYQCDETQGYLMCRPLPLERLKA 815 >UniRef50_A9W1F1 Diguanylate cyclase n=7 Tax=Alphaproteobacteria RepID=A9W1F1_METEP Length = 697 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 49/90 (54%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + LDDFGTG ++ +++ ++R D +KI R L L ++ + R L +L L V+ Sbjct: 584 MALDDFGTGYSSLASVRQLRADRVKIDRSLVTGLSEAEDKRGLVQAVLGLGRALGLEVVA 643 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 EG+ET ++ +Q QG+ L RP P Sbjct: 644 EGIETADDLATLQAMGCPFMQGYHLGRPQP 673 >UniRef50_B8KB61 Ggdef family protein n=2 Tax=Vibrio RepID=B8KB61_VIBPA Length = 825 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 47/95 (49%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++FS LS+ +D +K+ RE ++ + + L + V+ EG Sbjct: 575 IDDFGTGYSSFSYLSDSNFDLLKVDREFVTNIKMGSHQYFIVKMITELAHTLGVKVVAEG 634 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTA 251 VET E + QG+F S+P P+ L A Sbjct: 635 VETRHELEVLCGLGVDFIQGYFFSKPLPLNELEKA 669 >UniRef50_A6W4V7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W4V7_KINRD Length = 792 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Query: 119 KILRQIERLP-WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSALSE 172 +IL Q E P L EL E + L DS + G + +DDFGTG + F L Sbjct: 641 EILAQHEIPPHLLTLELTESVFLDSDSPAERVVTELAALGCQIAIDDFGTGYSAFGYLDR 700 Query: 173 VRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAF 232 + +K+ R L + + G ++ + ++ L NR V+VEGVET EE ++ A Sbjct: 701 LPVHVLKVDRSLTQSMTGAGNGLSVVTAVVDLANRLGLTVVVEGVETDEEAEICRSIQAG 760 Query: 233 AAQGWFLS 240 QGW S Sbjct: 761 LGQGWLYS 768 >UniRef50_C6C4X5 EAL domain protein n=1 Tax=Dickeya dadantii Ech703 RepID=C6C4X5_DICDC Length = 524 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 20/207 (9%) Query: 62 RLPPDRYFT---EITVSHRME--VVKEQID----LLAQKADFFIEHGLLASVNIDGPTLI 112 ++ PD + ++ ++H + V+ + +D +L DFFI L +S ++ T Sbjct: 304 QVSPDLFIQLAEKLGITHEITKLVIDKSLDECQSILTHSQDFFISFNL-SSGDLCSKTFF 362 Query: 113 ALRQQPKILRQIERLPWLRFELVEHIRLPKD---STFASMCEFG-PLWLDDFGTGMANFS 168 Q+ +I + FE+ EHI L + S + G + LDDFGTG +N S Sbjct: 363 TQIQENMKTYRIHA-HQIAFEITEHINLDAELLSSQIKKLMSMGHSISLDDFGTGSSNLS 421 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD--- 225 +L ++++D +KI + L + ++ ++ + + ++ EG+E E+++ Sbjct: 422 SLVDLQFDTVKIDKMFLHHLNNDKLWMDIIYSIIRMVESHHKRIVFEGIE--EQYQSDFI 479 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++N+ QGW + E L T + Sbjct: 480 LKNTQNVYGQGWLFYKAMRNEQLITVI 506 >UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacillus RepID=B9IRT3_BACCQ Length = 909 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 5/116 (4%) Query: 132 FELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFV 186 EL E I + + S + E+G +DDFGTG ++ + LS D +K+ RE Sbjct: 776 LELTERIAMIDEKETLSKLKQLKEYGIQTSIDDFGTGYSSLAYLSIFPIDTLKVPREFTQ 835 Query: 187 MLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + PE R + S +L L N V+ EG+ET ++ + +Q + QG++ S+P Sbjct: 836 LADHRPEERAIVSTILSLANTLNLSVVAEGIETEKQLKFLQKNNCKYMQGYYFSKP 891 >UniRef50_Q1YHR6 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YHR6_MOBAS Length = 513 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 20/225 (8%) Query: 33 TWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 +QPI GRL E L HP +PP + S ++++ E + A + Sbjct: 274 AYQPIVTAEGRLHGCEALVRWRHP--SRGIIPPVDFIPIAEQSLLIDLLGEWVFRRACR- 330 Query: 93 DFFIEHGLLASVNIDGPTLIALRQQPKILRQIER------LPWLRF--ELVEHIRLPKDS 144 D L VN L ++ ++ +E +P R E+ E + + + Sbjct: 331 DGVEAGSLFIGVNFSASQL----KRDDVVTMVESVLAETGMPAKRIVIEITESVAMNAND 386 Query: 145 T----FASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFS 199 A++ G + LDDFGTG + FS L D IKI R + L S L + Sbjct: 387 GVIRRLAALRALGLRISLDDFGTGYSGFSYLRAFPIDSIKIDRSFVIKLGDSEADNVLIT 446 Query: 200 QLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 L + N ++ EGVET E+ + QG++ +RP P Sbjct: 447 ALASVANAMGLSIVAEGVETAEQMLLASTAGCKLLQGYYFARPQP 491 >UniRef50_B4SIC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Stenotrophomonas RepID=B4SIC9_STRM5 Length = 1020 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 49/96 (51%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG ++ S L + D +KI R + +P ++ LL L + +I EG Sbjct: 920 LDDFGTGYSSMSYLQHLPLDILKIDRSFVADVETNPRNASICRALLSLGHSMGLTIIAEG 979 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 VETP + + QG+ L RPAP+E + A+ Sbjct: 980 VETPGQLDWLAAHGCDQVQGYLLGRPAPLEQIIDAL 1015 >UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Methylobacterium RepID=B1ZFY0_METPB Length = 833 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 51/97 (52%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L LDDFGTG ++ S L ++D IK+ + L + + T+ + HL + V V Sbjct: 714 LALDDFGTGYSSLSYLQRFKFDKIKVDQSFVRRLGRHADTLTIVRAITHLGHNLGLQVTV 773 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTA 251 EGVET E+ ++ QG+ +RPAP+ L+ A Sbjct: 774 EGVETQEQLAMLRELGCDQMQGYLFARPAPMTELSQA 810 >UniRef50_A1KBS5 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBS5_AZOSB Length = 752 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 130 LRFELVEHI----RLPKDSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L E+ E I R + +CE G P+ +DDFGTG ++ + L + +KI R Sbjct: 618 LEIEVTESIAMDERYATGNMLGRLCEAGFPIAIDDFGTGYSSLAYLRTLPAHTLKIDRSF 677 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + +PE +T+ ++ L R VI EGVE + ++ AQG+ +RP P Sbjct: 678 VQEIGVTPERQTIADMIIGLGRRLDMRVIAEGVENSAQADWLKTRGCHHAQGYLFARPEP 737 Query: 245 IETL 248 + L Sbjct: 738 VAGL 741 >UniRef50_B9YRF0 Diguanylate phosphodiesterase n=1 Tax='Nostoc azollae' 0708 RepID=B9YRF0_ANAAZ Length = 353 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 +++DDFGTG ++ S L E+ + +KI R FV SP G + + +L + VI Sbjct: 252 VYIDDFGTGYSSLSRLCELPLNVLKIDRS-FVQKLNSPSGNQVVQAITNLAHTLGLEVIA 310 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRP 242 EGVET E++ +Q QG+F ++P Sbjct: 311 EGVETVEQFLKLQLLGCNQGQGYFFAKP 338 >UniRef50_Q2SM38 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SM38_HAHCH Length = 783 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 37/241 (15%) Query: 34 WQP-IYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA 92 +QP ++ GR+ E L +HP +PPD F E+ EQ L+A Sbjct: 539 YQPKMHLASGRVDKCEALIRWSHP--EQGFIPPD-IFVELA---------EQAGLIASLT 586 Query: 93 DFFIEHGLLASV------NIDGPTLIALRQQP--------KILRQIERLPW----LRFEL 134 D+ + H ++ V ID I L Q +L Q+E L + FEL Sbjct: 587 DW-VTHTVINQVAEWRDQGIDLQAAINLSAQDLERDELLDNVLNQLETLKLPTRAISFEL 645 Query: 135 VEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLR 189 E + D A M F L +DD+G G ++ S L ++ IKI + + L Sbjct: 646 TERDMMSDADHAIALMQRFRQRGFTLSVDDYGIGYSSLSKLKQMPVSEIKIDKSFVIPLE 705 Query: 190 QSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 QS + + + L + + VI EGVE+ + QG+FLS+P P + L Sbjct: 706 QSASDKIIVRSTIELGHSFNLKVIAEGVESQRSMDLLAEMGCDYIQGYFLSKPMPAKELA 765 Query: 250 T 250 + Sbjct: 766 S 766 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 7/101 (6%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFG G ++ S L + +D IKI R L +SPE + + L + EG Sbjct: 850 LDDFGVGYSSLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEG 909 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAP-------IETLNT 250 VET E+ V+ A QG++ RP P IETLN Sbjct: 910 VETEEQLDFVRECGCTAVQGYYFGRPCPAAEVARTIETLNA 950 >UniRef50_A6VUG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VUG3_MARMS Length = 731 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 49/93 (52%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++ S L + D +KI R + L P+ R + ++ + ++ V+ EG Sbjct: 630 IDDFGTGYSSLSQLKNLPVDLLKIDRSFVMDLENDPDDRKIVEAIIAMAHKLNIKVLAEG 689 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 VET E+W+ + QG+++S+ + N Sbjct: 690 VETREQWKMLAAFQCDFGQGYYVSKAVTADEFN 722 >UniRef50_A3WMF3 PAS:GGDEF protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WMF3_9GAMM Length = 769 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 50/97 (51%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGT ++ + + D IKI R L+ + + +++L R+ R V+ EG Sbjct: 671 LDDFGTHYSSLTYFRRLPVDEIKIDRSFITNLKPNTNDEAIVESIIYLSRRFNRDVVAEG 730 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 VET E+ +Q QG+ +S P +E LN +++ Sbjct: 731 VETQEQADHLQALGCHLIQGYLISPPVSLEELNYSMV 767 >UniRef50_P32701 Uncharacterized protein yjcC n=108 Tax=Enterobacteriaceae RepID=YJCC_ECOLI Length = 528 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 9/195 (4%) Query: 57 LNPSQRLP---PDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA 113 +NP++ +P + +IT V ++ D LA AD ++ L AS + LIA Sbjct: 316 MNPAEFIPLAEKEGMIEQITDYVIDNVFRDLGDYLATHADRYVSINLSAS-DFHTSRLIA 374 Query: 114 LRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEF----GPLWLDDFGTGMANFSA 169 R K + R ++FE+ EH L D + F + +DDFG G +N Sbjct: 375 -RINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIILAFRQAGYEVAIDDFGIGYSNLHN 433 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L + D +KI + L + ++ L + I EGVET E+ ++ Sbjct: 434 LKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEGVETEEQVNWLRKR 493 Query: 230 PAFAAQGWFLSRPAP 244 QGWF ++ P Sbjct: 494 GVRYCQGWFFAKAMP 508 >UniRef50_Q1ZWI1 Putative uncharacterized protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZWI1_PHOAS Length = 489 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 1/90 (1%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG +NF + ++ D IK+ R +F+ + + ++++ L++ + +I+EG Sbjct: 393 LDDFGTGYSNFLTMHKLPIDIIKVDR-MFISSKNDIISFDILTKIIDLLDTWKLPIIMEG 451 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 VET EE V++ QG++ S+P ++ Sbjct: 452 VETEEELNKVKSLSIDLIQGYYFSKPLSVD 481 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 47/89 (52%) Query: 154 PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVI 213 PL +DDFGTG + S L + ++ +KI R + S + L ++ + + VI Sbjct: 921 PLSIDDFGTGYSALSYLIKFPFNRLKIDRSFITDMTHSQKAMGLVKTIIAMSHGLNLQVI 980 Query: 214 VEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 EGVET E+ +++ AQG+F SRP Sbjct: 981 AEGVETSEQLNSLKSQGCDYAQGYFFSRP 1009 >UniRef50_B5EUH5 Diguanylate cyclase/phosphodiesterase domain 2 n=11 Tax=Gammaproteobacteria RepID=B5EUH5_VIBFM Length = 696 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 6/123 (4%) Query: 129 WLRFELVEHIRLPKDSTFASMCEF-----GPLWLDDFGTGMANFSALSEVRYDYIKIARE 183 WL E+ E L + S E + +DDFGTG A+F L + +D IK+ R Sbjct: 557 WLEIEITEEAILSDNHNLLSTLEILKSHGIKIAMDDFGTGYASFPHLLKYPFDKIKLDRS 616 Query: 184 LFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPA 243 L ++ + +G+ L+ + + + V+ EGVET +E++ V QG+ ++RP Sbjct: 617 L-LLDASTTKGKQLYQLIAQMGDVANCEVVAEGVETEDEFKFVAECGVDKVQGFLIARPQ 675 Query: 244 PIE 246 P+ Sbjct: 676 PLS 678 >UniRef50_B7DP82 Diguanylate phosphodiesterase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DP82_9BACL Length = 147 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 45/89 (50%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + +DDFG G + L +++ D+IKI ++L L Q R + H+ + VI Sbjct: 55 IAIDDFGAGYSGLVTLVQIKPDFIKIDKQLIKELNQDFLKRRVVEATCHIAAAFSGIVIA 114 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPA 243 EG+ET EW + ++ QG+ RP+ Sbjct: 115 EGIETEAEWAEAKSCGVHYGQGFLFGRPS 143 >UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI Length = 528 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 22/235 (9%) Query: 35 QPIYQTCGRLMAVELLTVVTHP----LNPSQRLPPDRYFTEIT--VSHRMEVVKEQIDLL 88 QPI GR+ + E+L HP + P +P I S M V++Q+ Sbjct: 273 QPIMDIHGRMASAEVLMRWQHPSAGLIRPDLFIPLAEESGLIVPMTSQVMAKVRDQLGPY 332 Query: 89 AQK--ADFFIEHGLLAS--VNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDS 144 K +DF I + A VN D ++ L L EL E L +D+ Sbjct: 333 QSKIPSDFHISFNISAKHCVNSD-----LVKDCQHFLSAFNHPSLLSLELTER-ELIEDT 386 Query: 145 T-----FASMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLF 198 FA + + G L +DDFGTG ++ + L ++D +KI + M+ + + Sbjct: 387 EEARKLFAKLNQIGVRLAIDDFGTGHSSLNYLQTFQFDVLKIDQSFVRMIGSNAVASHIV 446 Query: 199 SQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 LL+L R + EG+ET E+ QG+F + P P++ T ++ Sbjct: 447 DTLLNLAQRLNMQTVAEGIETEEQVTYFAARGVDYMQGYFYASPMPMDDFLTHLV 501 >UniRef50_B4S296 GGDEF/EAL domain protein n=2 Tax=Alteromonas macleodii RepID=B4S296_ALTMD Length = 814 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 46/88 (52%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ S L + DYIKI R + S + R + + ++ V+ Sbjct: 704 LAIDDFGTGYSSLSYLKSLPADYIKIDRSFVANIASSADDRNIVHSTISMVCNMGMQVVA 763 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRP 242 EG+ET E++ + + QG+ +S+P Sbjct: 764 EGIETSEQYELLCHFDCHIGQGYLISKP 791 >UniRef50_A0P381 Putative diguanylate phosphodiesterase (EAL domain) n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P381_9RHOB Length = 730 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 9/162 (5%) Query: 97 EHGLLASVNIDGPTLIALRQQPKILRQIER----LPWLRFELVEHIRLPKDSTFASMCEF 152 E G S+N+ L K+LR IE+ + FE+ E I + ST S + Sbjct: 568 EKGFKISINLSMYDLNLPGFARKLLRTIEKAGMPVETFEFEVTEGIAMKNQSTAISQLQM 627 Query: 153 -----GPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNR 207 + LDDFGTG ++ S L + D +KI R L ++ + +L Sbjct: 628 LREAGSTIALDDFGTGYSSLSQLQALPVDVLKIDRSFVGDLTADNARHSMAAIILSTTKA 687 Query: 208 YCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 + EG+ETPE+ + + + QG+ +P P E + Sbjct: 688 LDLQCVAEGIETPEQEQALASLGCTIGQGYLYGKPCPFEVFS 729 >UniRef50_A6F867 Sensory box/GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6F867_9GAMM Length = 831 Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Query: 150 CEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYC 209 C FG L LDDFGTG ++ S LS++ ++ IKI R S + L ++ + N + Sbjct: 723 CGFG-LSLDDFGTGFSSLSYLSDLPFNEIKIDRSFIDKFLDSDQSDALVKTIIAIGNSFN 781 Query: 210 RGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 V+ EGVET ++ +++ QG+F ++P + L + Sbjct: 782 MTVVAEGVETQAQYDKLRHYNCDLLQGYFFAKPLRLNELTQYI 824 >UniRef50_Q21L06 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonadales RepID=Q21L06_SACD2 Length = 746 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ S L ++ +D +K+ + FV +P GR + +++L VI Sbjct: 638 LSVDDFGTGFSSLSYLQKMPFDNLKVDQS-FVQTSDTPSGRKIVEMIVNLGQTLGMNVIA 696 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNT 250 EGVET E+ ++ QG+ L++P + L T Sbjct: 697 EGVETREQLDLLRELGCQQVQGYLLAKPMSCDELTT 732 >UniRef50_A4C4P9 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C4P9_9GAMM Length = 908 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 5/126 (3%) Query: 128 PWLRFELVEHI----RLPKDSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAR 182 W+ EL E + +L + + + G + +DDFGTG ++ S LS+ D +KI R Sbjct: 773 SWVILELTESVLMIEQLTNNHEIFLLRDMGVKIAIDDFGTGYSSLSYLSKFPVDMLKIDR 832 Query: 183 ELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + P R L +L L ++EG+ET + + A QG++ S+P Sbjct: 833 SFIANIETDPSARRLIDTILKLAEGLDLETVIEGIETQAQLDFISELGATYYQGYYFSKP 892 Query: 243 APIETL 248 + TL Sbjct: 893 KRVATL 898 >UniRef50_B0TE28 Eal domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TE28_HELMI Length = 323 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 47/87 (54%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDD G G ++ + L+ +R D++K+ EL + + + +LL L R I EG Sbjct: 225 LDDLGAGYSSLNLLTHLRPDFVKLDMELVRNVDKDAYKGEITMKLLELARRLQIKTIAEG 284 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPA 243 VE PEEWR ++ A QG+ ++PA Sbjct: 285 VERPEEWRWLKKHGADYVQGYLFAKPA 311 >UniRef50_A6V5X2 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=7 Tax=Pseudomonas aeruginosa RepID=A6V5X2_PSEA7 Length = 533 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 25/233 (10%) Query: 34 WQPIYQTC-GRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKE--------Q 84 +QPI + GR + VE L T + R+ PD + + S ++++ Q Sbjct: 295 YQPIVRLADGRCIGVEALARWTD--SSLGRVSPDIFIGALEESGDIQLLTRFVFRRALRQ 352 Query: 85 IDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIER---LPW-LRFELVEHIRL 140 + L +K E G S+N+ G + +RQ+ R LP + EL E Sbjct: 353 LGPLLRK-----EPGFYVSINVTGKDIANPGFIDFAIRQMARERVLPAQVALELTERTTE 407 Query: 141 PKDSTFASMC---EFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRT 196 + A M E G +++DDFGTG +N L+ + D IKI + + +S Sbjct: 408 AQVCLLAGMNRLRELGLKIYVDDFGTGHSNLVYLANLPVDAIKIDKVFTQSIGESEAVEL 467 Query: 197 LFSQLLHLMNRYCRGVIVEGVETPEEWRDV-QNSPAFAAQGWFLSRPAPIETL 248 +F +L + + GV+VEG+ET + V + SP QGW R +E Sbjct: 468 IFDKLCSMAEQLQIGVVVEGIETQAQADYVSRRSPEALGQGWHFGRALALEAF 520 >UniRef50_D0M9B0 Sensory box/GGDEF family protein n=4 Tax=Vibrio RepID=D0M9B0_VIBSE Length = 763 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 9/162 (5%) Query: 96 IEHGLLASVNIDGPTLIALRQQPKILRQIER----LPWLRFELVEHIRLPKDSTFASMCE 151 I+ + S+NI + + ++ IE+ + E+ E++ + FA +CE Sbjct: 587 IDTSIQISINISVKQFVHAKFITNLMNAIEKRGIECSKITLEITENLFIEDLEKFAPICE 646 Query: 152 ----FG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMN 206 G + LDDFGTG ++ S L + D +KI + + + + ++ + Sbjct: 647 RLHALGFKISLDDFGTGYSSLSMLRTLPIDEVKIDKSFVDHIEHDKKALNMVKNIISIGK 706 Query: 207 RYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 + V+ EGVET ++ +++ QG+F S+P +E L Sbjct: 707 NFEMKVLAEGVETLQQLNELKACGCDLIQGYFYSKPLSLEDL 748 >UniRef50_A0JTU2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Arthrobacter sp. FB24 RepID=A0JTU2_ARTS2 Length = 714 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG ++ L E+ D +KI R M+R E + + ++++ + V EG Sbjct: 602 LDDFGTGYSSLGRLQELPVDAVKIDRSFVSMVRTGAEKLPILNSMINMAHSLGLTVTAEG 661 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 +ET + R + N + QG+ S P P + A+L Sbjct: 662 IETAAQARHLTNLHCDSLQGYLFSHPEPQSGVELALL 698 >UniRef50_Q2P5Q4 Response regulator n=11 Tax=Proteobacteria RepID=Q2P5Q4_XANOM Length = 447 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 152 FGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRG 211 FG L +DD+GTG ++ L+ + + +K+ R +S RT+ L L +R Sbjct: 326 FG-LSIDDYGTGFSSLQRLASIPFTELKLDRSFVHAAHRSRSQRTVLESTLELAHRLELT 384 Query: 212 VIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 + EGVETP++WR ++ AQG+ ++ P P L+ Sbjct: 385 AVAEGVETPDDWRLLRELGCDLAQGYLMASPMPGPMLS 422 >UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acinetobacter radioresistens RepID=C6RJR5_ACIRA Length = 855 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 52/98 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++ S L + + IK+ R L +S + + ++HL ++ V+ EG Sbjct: 755 IDDFGTGYSSLSYLRRLPINQIKLDRSFIEHLTESDQDAAIVQSIIHLAHQLNLEVVAEG 814 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 VET ++ + QG+F +RPAPI L T ++ Sbjct: 815 VETLKQAAFLYQQGCDLLQGYFYARPAPITELKTIYIS 852 >UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR2_9RHOB Length = 1031 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 5/118 (4%) Query: 130 LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L E+ E + + D +T + E G + LDDFGTG ++ S L +D +KI R Sbjct: 860 LELEITESVLIHDDRRALNTLRQLKELGITIALDDFGTGYSSLSYLRRFPFDRLKIDRSF 919 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRP 242 + Q+PE + ++ L VI EGVET E ++N QG+ + RP Sbjct: 920 VSGVTQTPELAAIIRAVIDLGQALGMEVIAEGVETEPELELLRNESCDEVQGYLIGRP 977 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 5/120 (4%) Query: 130 LRFELVEHIRLPKDSTFAS-MCEFGP----LWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L E+ E + + D A + +F + LDDFGTG ++ + L E R DY+KI R Sbjct: 573 LALEITETLLMDTDQAIADKLAQFRAAGVQIALDDFGTGYSSLAYLKEFRIDYLKIDRTF 632 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + + L ++ + +R VI EGVETP+++ ++ QG+ SRP P Sbjct: 633 VRDMTPDSKSFLLSEAIVTMAHRLGLKVIAEGVETPQQYALLERIGCDYFQGYLFSRPLP 692 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 9/163 (5%) Query: 99 GLLASVNIDGPTLIA---LRQQPKILRQIERLP-WLRFELVEHIRLPK-DSTFASMCEFG 153 G + SVN+ + Q +++Q E P L+ EL E + L + T A+M Sbjct: 725 GFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALK 784 Query: 154 PLW----LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYC 209 L LDDFGTG ++ L + D +KI + + R + ++ + + Sbjct: 785 ELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLD 844 Query: 210 RGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 VI EGVET E+ + + + QG+ +P PIE T++ Sbjct: 845 LDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSL 887 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 5/131 (3%) Query: 130 LRFELVEHIRLPKDSTFA-SMCEFGPLW----LDDFGTGMANFSALSEVRYDYIKIAREL 184 L+ EL E + L S MC L +DDFGTG ++ S L + D +KI + Sbjct: 1000 LKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSF 1059 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + + ++ + + VI EGVET + ++ + QG++ +PAP Sbjct: 1060 VRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAP 1119 Query: 245 IETLNTAVLAL 255 IE + + AL Sbjct: 1120 IEQFQSQLEAL 1130 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 103/262 (39%), Gaps = 33/262 (12%) Query: 10 SNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHP----LNPSQRLPP 65 SN EA + R+ + E +QP+ RLM E L HP + P+ +P Sbjct: 598 SNLEADL-----RQGLARAELLVYYQPVVDHQARLMGAEALVRWRHPQRGMIGPADFIPL 652 Query: 66 DRYFTEIT--VSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDG-----PTLIALRQQP 118 I + ++ Q+ +Q D GL SVN+ P +A Sbjct: 653 AEQTGLILPLGQYVLQTACAQLQRWSQHPD---TAGLSISVNVSARQFRQPGFVA----- 704 Query: 119 KILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMANFSA 169 ++L Q++ L+ EL E + L + T A M + LDDFGTG ++ S Sbjct: 705 QVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSLSY 764 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L + D IKI + + P + +L L V+ EGVET + +Q Sbjct: 765 LKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQLH 824 Query: 230 PAFAAQGWFLSRPAPIETLNTA 251 QG+ RP P+E A Sbjct: 825 GCEGFQGYLFGRPVPMEVFACA 846 >UniRef50_C3MGT7 Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain n=1 Tax=Rhizobium sp. NGR234 RepID=C3MGT7_RHISN Length = 928 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 49/92 (53%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++ L +D IK+ + + SP+ + + +L L + V+ EG Sbjct: 829 IDDFGTGYSSLETLRAFPFDKIKLDKSFMSEVEGSPQAKAIIRAILALGHSLQVPVLAEG 888 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 VET ++ +Q AQG+ L RPAPI ++ Sbjct: 889 VETQKQLDILQAEGCDEAQGYLLGRPAPIGSV 920 >UniRef50_C7DBK4 Sensory box/ggdef family protein n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DBK4_9RHOB Length = 664 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%) Query: 100 LLASVNIDGPTLIALR---QQPKILRQIERLP-WLRFELVEHIRLPKDSTFASMC----E 151 L SVN+ G + R +IL++ P L E+ E + L ++ +++ E Sbjct: 492 LSVSVNLSGLHFVNARIVDHVRRILKETNLPPHLLTLEITETVLLDDWTSVSNVLDQLRE 551 Query: 152 FGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCR 210 GP + LDDFGTG ++ + L + D +KI R L QS E R + ++ + Sbjct: 552 LGPKISLDDFGTGFSSLAYLRSIAADELKIDRSFVTELVQSQEARFVLDAVVDIARGLGM 611 Query: 211 GVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIET 247 ++VEG+ET + V++ AQG+ P T Sbjct: 612 TIVVEGIETDAQADIVRDFGCHNAQGFLFGGPKDATT 648 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 49/97 (50%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG ++ S L + D++KI + + ++ ++ L N GVI EG Sbjct: 728 LDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEG 787 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 VET + + +S QG++ SRP PIE + L Sbjct: 788 VETEAQRDFLASSGCHTYQGYYFSRPLPIEDFESFTL 824 >UniRef50_B9L6X7 Sensory box sensor/ggdef/eal domain protein n=1 Tax=Nautilia profundicola AmH RepID=B9L6X7_NAUPA Length = 826 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 6/159 (3%) Query: 93 DFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVE-----HIRLPKDSTFA 147 ++ E + S N+ G +L ++ IE+LP + EL E +I K+ Sbjct: 657 EYLKELNIPLSFNVSGKSLTDENHIEQLFGNIEKLPII-IELTEREIAGNIEYTKEIFRF 715 Query: 148 SMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNR 207 + L +DDFGTG ++ + L ++ DY+KI + S + + +++ ++ Sbjct: 716 FKEKKFKLSIDDFGTGYSSLTYLKDLPADYLKIDMSFIKNIETSEKDLAIVETIINFAHK 775 Query: 208 YCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 + I EGVET ++ + ++ QG++ ++P P+E Sbjct: 776 FNLKTIAEGVETEKQVKILKELNCDYLQGFYFAKPMPLE 814 >UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Magnetospirillum RepID=Q2W7L5_MAGSA Length = 916 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 45/92 (48%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ S L D +KI R L PEG L ++H+ VI Sbjct: 809 LSIDDFGTGYSSLSYLKRFPVDVLKIDRSFVTDLPGDPEGEALCLAIIHMAKALSLDVIA 868 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 EGVET + + AQG+ +RP P++ Sbjct: 869 EGVETEAQSLFLARHGCDYAQGFHFARPVPVD 900 >UniRef50_B8ERS4 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS4_METSB Length = 868 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 43/88 (48%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++ L + R D IKIARE L P T+ + L VI EG Sbjct: 743 IDDFGTGYSSLEYLRDYRVDRIKIAREFVSRLPSDPRSATIVRATIGLARELGIEVIAEG 802 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAP 244 VET + + S QG++ RPAP Sbjct: 803 VETAGQAEFLMASRCRRIQGYYFGRPAP 830 >UniRef50_A6W5C3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W5C3_KINRD Length = 609 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 90/227 (39%), Gaps = 20/227 (8%) Query: 34 WQPIY-QTCGRLMAVELLTVVTHPLN---PSQRLPPDRYFTEITVSHRMEVVKEQIDLLA 89 +QPI + G L+ VE L THPL P P T + V ++ + Sbjct: 358 FQPIVVPSTGELVGVEALARWTHPLRGPVPPAEFVPVAETTGLIVEMGAAILADAC---- 413 Query: 90 QKADFFIE---HGLLASVNIDGPTLIALRQQPKILRQIERLPW----LRFELVEHIRLPK 142 + A E LL +VN+ G L+ + + W L E+ E + Sbjct: 414 RGARTLREAWGRDLLLTVNVSGRELVRDGFAEHVHDVLRATGWPADLLVVEVTESLLDGS 473 Query: 143 DSTFASMCE----FG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTL 197 T E FG + +DDFGTG + FS L + DY+K+ + SP + Sbjct: 474 TGTALRALEDLRAFGVSVAIDDFGTGYSAFSRLDTLPADYLKLDSGFIAEITTSPRRAGV 533 Query: 198 FSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 LL L + V+ EGVETPE+ + AQGW R P Sbjct: 534 LQALLSLSHALGLEVVAEGVETPEQADLLTGLGCPLAQGWLFGRAVP 580 >UniRef50_C9XPS2 Putative signaling protein n=6 Tax=Clostridium difficile RepID=C9XPS2_CLODC Length = 514 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 53/98 (54%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFG+G ++ + L E+ D +K+ ++ + S + + ++++ + VI EG Sbjct: 412 MDDFGSGYSSLNMLKEIPMDILKLDQKFIMETYNSKRSKIIVTKVIEMAKELGMKVISEG 471 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 VET E+++ ++ AQG+ +P PIE +++ Sbjct: 472 VETEEQFKLLKEVKCDMAQGYLFGKPMPIEEFEHLIVS 509 >UniRef50_Q7MEA0 GGDEF family protein n=46 Tax=Vibrionales RepID=Q7MEA0_VIBVY Length = 660 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Query: 144 STFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLL 202 +T + EFG L LDDFGTG A+FS L + +D IKI + + +S E + + ++ Sbjct: 536 ATLERLHEFGVTLSLDDFGTGYASFSYLKKYPFDAIKIDKSFVQHIDKSEEDKEIIRSII 595 Query: 203 HLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 H+ + V++EG+E+ + + QG+ +P P Sbjct: 596 HVAKKLDLEVVMEGIESDLQEDFLIREGCDIGQGFLYGKPMP 637 >UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6FHU8_9GAMM Length = 628 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 5/120 (4%) Query: 130 LRFELVEHIRLPKDSTFA----SMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L E+ E + L + A + + G + LDDFGTG ++ S L + +D +KI R Sbjct: 495 LELEITEGVLLQDEKKVAKSLDGLQKLGVSISLDDFGTGYSSLSYLQKYSFDTLKIDRSF 554 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + L + + + L ++ + + V+ EGVETPE+ + + QG+ +P P Sbjct: 555 IMNLMECDQDKELARAIIAMAKKLNLQVVAEGVETPEQHQFIVEEGCDFGQGYLYGKPVP 614 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 51/100 (51%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ + L D +KI R + + R + + ++ L N VI Sbjct: 992 LSIDDFGTGYSSLAYLKRFPVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIA 1051 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 EGVET E++ + AQG+++++P P E ++ A Sbjct: 1052 EGVETKEQYDLLSALNCNFAQGYYMAKPMPAEMISLETAA 1091 >UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction protein n=3 Tax=Alteromonadales RepID=B4RZW0_ALTMD Length = 794 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 47/88 (53%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 + LDDFGTG ++ S L ++ DY+KI + + + L ++ + + V+ Sbjct: 694 IALDDFGTGYSSISYLKKLPTDYLKIDKSFVKTMTDVSNDKVLCEAIIVMAKKLGIKVVA 753 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRP 242 EGVET E++ + N QG+F++RP Sbjct: 754 EGVETQEQYDILNNMGCDFGQGYFIARP 781 >UniRef50_B9R1B0 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R1B0_9RHOB Length = 852 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 29/236 (12%) Query: 34 WQPIYQ-----TCGRLMAVELLTVVTHP----LNPSQRLPPDRYFTEITVSHRM-----E 79 ++P YQ G+++ +E+L HP L PS+ L T+I+V+ + E Sbjct: 604 FEPYYQPQVEAKSGQIVGIEVLARWRHPEKGILAPSEFLT---VATDISVAGEIDQQMFE 660 Query: 80 VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPW-LRFELVEHI 138 EQ L A I L +V+ D L L I RQI+ P + FEL+E I Sbjct: 661 KAIEQCRNLPVAASGSI--ALSFNVSEDRVNLTDLED---IQRQIQAYPGQISFELLETI 715 Query: 139 RLP-KDSTF----ASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSP 192 L +D+ F + G + +DDFG+G A+ AL + D +KI R L ++ Sbjct: 716 FLEEQDNAFLQRLNELRGMGISIEVDDFGSGRASVVALQRINPDRLKIDRRLAPLVTAGS 775 Query: 193 EGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 G L ++ + GV EGVET E+ + QG++ ++P P L Sbjct: 776 GGLRLLRSIIEIAQALELGVTAEGVETKEQADLLSKLGCDRLQGYYFAKPMPFSDL 831 >UniRef50_A1K7N7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7N7_AZOSB Length = 567 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 48/88 (54%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L LDDFGTG ++ S L + D +K+ R + + + + R+ +++L ++ R V+ Sbjct: 461 LMLDDFGTGYSSLSYLHRLPIDALKVDRSFVMHMHERADDRSFVETIVNLAHKLGRAVVC 520 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRP 242 EGVE PE+ ++ QG+ SRP Sbjct: 521 EGVELPEQEALLRELGVEYGQGYLYSRP 548 >UniRef50_B1M7E5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M7E5_METRJ Length = 953 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 8/133 (6%) Query: 119 KILRQIERLPWLRFEL--VEHIRLPKD-STFASMCEFGPLW----LDDFGTGMANFSALS 171 ++LR+ RLP R EL E + L +D ++F + L +DDFGTG ++ S+L+ Sbjct: 804 EVLRKT-RLPSHRLELEITESVILSQDQASFDMLSRLRRLGVRFSMDDFGTGYSSLSSLN 862 Query: 172 EVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPA 231 R+D IK+ + L + E + + L EGVETPE+ ++ S Sbjct: 863 TFRFDKIKLDQSFVRNLLEKDEAAAIVHVVAELGRSLKITTTAEGVETPEQLARLRASGF 922 Query: 232 FAAQGWFLSRPAP 244 QG+ LS+P P Sbjct: 923 SEVQGYLLSKPIP 935 >UniRef50_D0HE44 GGDEF family protein n=5 Tax=Vibrio RepID=D0HE44_VIBMI Length = 674 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L LDDFGTG A+F L + +D IKI + + S + + +LH+ + V+ Sbjct: 566 LSLDDFGTGYASFQYLKKFPFDGIKIDKSFLEQIEHSENDQEIVRSMLHVAKKLKLKVVA 625 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 EG+ET ++ + + QG+ RP P Sbjct: 626 EGIETKQQEQFILEHGCDIGQGFLYGRPMP 655 >UniRef50_Q2SEI0 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEI0_HAHCH Length = 571 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Query: 148 SMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMN 206 S+ E G + +DDFGTG ++ + L+ + D +KI + F+ + + + ++ L + Sbjct: 454 SLHELGLRIAVDDFGTGYSSLAYLTRLPIDILKIDKCFFLEAQHDERNKKVIETVVALGH 513 Query: 207 RYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 V EG+E+ ++W D + S AQG+ RP P Sbjct: 514 HLGLKVTAEGIESDKQWNDAKKSRCDLAQGYLFGRPTP 551 >UniRef50_Q2BQA3 Signaling protein (CHEY,EAL,GGDEF domains) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQA3_9GAMM Length = 744 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Query: 130 LRFELVEHIRLPK-DSTFASMCEFGPLW----LDDFGTGMANFSALSEVRYDYIKIAREL 184 + FE+ E + + D+ A++ + L +DDFGTG + S L + +D +KI + Sbjct: 609 VEFEITESVAMMDIDTVRATLKQIHDLGAQVAIDDFGTGFSCLSYLETLHFDRLKIDKSF 668 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + G + +++L VI EGVET E+ ++ F AQG+F +P Sbjct: 669 IDKMSNENAGTYIPEMIINLGRDLDMSVIAEGVETQEQVSRLKGLNCFEAQGYFFGKPMD 728 Query: 245 IETL 248 +++L Sbjct: 729 MKSL 732 >UniRef50_C3VA06 Putative phospholipase A2 family protein n=1 Tax=Pseudomonas nitroreducens RepID=C3VA06_9PSED Length = 645 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 21/162 (12%) Query: 104 VNIDGPTLIALRQQ----PKILRQIERL--------PWLRFELVEHIRLPKD-----STF 146 + I+ P + L Q P+++ ++E L W++FE+ E L KD T Sbjct: 471 LGINIPLAVNLSAQDLYDPRLVGKVEGLMATWGSQGSWIQFEVTES-GLMKDPSVALETI 529 Query: 147 ASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLM 205 + G +DDFG G ++ S LS + D IKI + + PE + + L Sbjct: 530 KKIKSMGIKFAIDDFGVGYSSLSYLSNLPVDLIKIDQSFVKAMLNEPEAAAIVGSTIELA 589 Query: 206 NRYCRGVIVEGVETPEEWRD-VQNSPAFAAQGWFLSRPAPIE 246 ++ V+ EGVE+ EE RD ++ QG+F+S P PIE Sbjct: 590 HQLNFEVVAEGVES-EEVRDRLEKMGCDIIQGYFISAPIPIE 630 >UniRef50_B5FFC2 Sensory box/ggdef family protein n=2 Tax=Vibrio fischeri RepID=B5FFC2_VIBFM Length = 845 Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 50/90 (55%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++ S L + +D +KI R L + ++ S ++H+ + ++ EG Sbjct: 744 IDDFGTGYSSLSYLHTLPFDCLKIDRSFVKSLTRENADTSITSAIIHMAKGFNVSIVAEG 803 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 +ET E+ +++ AQG+ S+P PIE Sbjct: 804 IETKEQAEILRSLGCDIAQGYLYSKPLPIE 833 >UniRef50_A1TZZ1 Diguanylate phosphodiesterase n=2 Tax=Alteromonadales RepID=A1TZZ1_MARAV Length = 137 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 130 LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L FE+ E + + D + E G L +DDFGTG ++ S L + +D +KI R Sbjct: 5 LEFEITEGVLMIGKSYIDDALCELHELGVKLSMDDFGTGYSSLSYLRQYSFDVLKIDRSF 64 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + E R L + + + + V+ EGVET E+ ++ AQG++ S+P Sbjct: 65 INGINVKREDRNLVTATIAMAHSLGLSVVAEGVETREQLDLLEELGCDIAQGFYFSKPIS 124 Query: 245 IETL 248 + L Sbjct: 125 AKEL 128 >UniRef50_A9BH42 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH42_PETMO Length = 684 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Query: 148 SMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMN 206 ++ E G + LDDFGTG ++ S L+++ D IKI + + + L S ++ + Sbjct: 572 ALKEIGLKIALDDFGTGFSSLSYLNKLDIDKIKIDKSFIDNILHDETSQRLVSSIISMSK 631 Query: 207 RYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 VI EGVE+ E+ +Q + QG++ S+P P + Sbjct: 632 SLGFEVIAEGVESEEQLLFLQEEGCYEVQGYYFSKPLPFD 671 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 46/92 (50%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++ + L R D +KI + L Q PEG + ++ L I EG Sbjct: 938 IDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEG 997 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 VE PE+ ++ S QG+ SRP P + L Sbjct: 998 VEKPEQLAFLRASGCQEVQGYLFSRPLPPDEL 1029 >UniRef50_A8M5E4 Diguanylate cyclase/phosphodiesterase n=4 Tax=Micromonosporaceae RepID=A8M5E4_SALAI Length = 826 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 46/92 (50%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG ++ L + +K+ R + + + + + + ++ L V+ EG Sbjct: 709 LDDFGTGFSSLQHLRRLPLSEVKVDRSFVLGMTEDADDAAIVTSVVELARALGLRVVAEG 768 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 VE WR + + AAQGWF +RP P + L Sbjct: 769 VEDERTWRMLHATGCDAAQGWFYARPMPADEL 800 >UniRef50_B9QX90 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QX90_9RHOB Length = 566 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 18/180 (10%) Query: 76 HRMEVVKEQID-LLAQKADFFIEHGLLASVNIDGPTLIALRQ---------QPKILRQIE 125 H M V +++ L + DF + L A +D + ++ Q ++ E Sbjct: 352 HMMRVASDEVGALYGEHPDFKLSINLFAGHFLDREIVADIKNTFENSEISYQQIVVEVTE 411 Query: 126 RLPWLRFELVEHIRLPKDSTFASMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIAREL 184 R P EL I A + G + LDD GTG + L ++ D IKI + Sbjct: 412 RYPLEDMELARKI-------MAELQALGVRIALDDVGTGHGGMAYLQKLGVDIIKIDKMF 464 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + T+ ++ L + G+I EGVE E+ + AAQG++ +RP P Sbjct: 465 IDSISSDDNSTTIVDSMVELADNLGMGIIAEGVEEEEQIDRLMELGVTAAQGYYFARPMP 524 >UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KC5_SACD2 Length = 823 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 28/214 (13%) Query: 63 LPPDRYFTEITVSHRMEVVKEQID--LLAQKADFFIEHG-LLASVNIDGPTL-IALRQ-- 116 +PPD++ I ++ ++ + ID +L + EHG L ++ I+G ++ ++ RQ Sbjct: 613 IPPDKF---IKLAEETGIIND-IDQWVLRATCKLWAEHGEALRAIGIEGVSMNLSARQFY 668 Query: 117 QPKILRQIERL--------PWLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTG 163 + +E + + FE+ E + + T + G + +DDFGTG Sbjct: 669 SKTLFAYVEAVFEEYGINPSCISFEITESMVIENIEGAIETMERLRNIGSRISIDDFGTG 728 Query: 164 MANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEW 223 ++ S L + D +KI R + + + S ++ + + VI EG+ET E+ Sbjct: 729 YSSLSYLKRLPIDSLKIDRSFIMDIPGDTNDVAITSAIIAMAEKLNLSVIAEGIETKEQC 788 Query: 224 RDVQNSPAFAAQGWFLSRPAPIET-----LNTAV 252 + F QG++ ++PAP+ T LN AV Sbjct: 789 EFLVEQGCFHMQGYYFAKPAPVRTFLKPQLNAAV 822 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 47/92 (51%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 LDDFGTG ++ L + D +KI R + S + T+ S ++ + + GVI EG Sbjct: 862 LDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGEG 921 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 +E ++ + V QG+F SRP P + L Sbjct: 922 IENDQQLQRVNLHACDYVQGFFYSRPMPYDEL 953 >UniRef50_Q483U6 Response regulator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q483U6_COLP3 Length = 397 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 16/199 (8%) Query: 65 PDRYFTEITVSHRMEVVKEQIDLLAQKADFF---IEHGLLASVNIDGPTLIALR---QQP 118 PD++ + +E + E++ LA K + S+NI + +L+ Q Sbjct: 195 PDKFIALAEQTGLIEQLSEEVIHLAIKQSVHWQKLNRATRLSINISAQNITSLKLPEQLR 254 Query: 119 KILRQIERLP-WLRFELVEHIRLPKDSTFASMCEFG-------PLWLDDFGTGMANFSAL 170 ++++ E P + EL E + DS S+ F L +DDFGTG ++ S L Sbjct: 255 MLVKKYEIDPSMIVLELTESALM--DSEVTSLDIFTRFRLKGFQLSIDDFGTGYSSLSQL 312 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 ++ + +KI + ++Q E + + L ++ + EG+E E W + Sbjct: 313 HKIPFTELKIDQSFVTNMKQEKESMAIVETCIMLAHKLNMEAVAEGIEDKETWDLLSAEG 372 Query: 231 AFAAQGWFLSRPAPIETLN 249 AQG++++RP P + + Sbjct: 373 CDIAQGYYIARPMPADQFD 391 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 48/92 (52%) Query: 157 LDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEG 216 +DDFGTG ++ S L E+ D +KI R + + ++ + + V+ EG Sbjct: 825 IDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEG 884 Query: 217 VETPEEWRDVQNSPAFAAQGWFLSRPAPIETL 248 VET ++++ +Q S QG++ ++P P E L Sbjct: 885 VETEQQFKFLQQSNCDQYQGYYFAKPMPFEAL 916 >UniRef50_C1F918 Sensory box/GGDEF family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F918_ACIC5 Length = 694 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 46/95 (48%) Query: 155 LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIV 214 L +DDFGTG ++ L + +D IK+ + + + E R + S +L L + Sbjct: 150 LAVDDFGTGYSSLKHLQALPFDVIKVDQSFVRCMVERRESRKIVSAVLGLGQTLGLRTVA 209 Query: 215 EGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLN 249 EGVETP++ R +Q QGW RP P L Sbjct: 210 EGVETPDQERMLQWLGCDVGQGWLFGRPMPAAHLG 244 >UniRef50_A6UJV0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sinorhizobium RepID=A6UJV0_SINMW Length = 729 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 6/136 (4%) Query: 119 KILRQIERLPW-LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSALSE 172 +LRQ PW L E+ E L + + ++ +FG LDDFGTG ++F L Sbjct: 580 SLLRQFSVEPWRLELEITETALLDEAGVCEKNITALRDFGVKFALDDFGTGFSSFGRLQR 639 Query: 173 VRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAF 232 + D IKI R + G + ++ + + + EGVET E+ ++N Sbjct: 640 LEVDRIKIDRSFVHAFDRPGGGVAVVQSIVGVAHAKGLRITAEGVETEEQSEILRNLGCD 699 Query: 233 AAQGWFLSRPAPIETL 248 QG+ LS+P P +L Sbjct: 700 ELQGFHLSKPVPKSSL 715 >UniRef50_D0XT35 Diguanylate cyclase/phosphodiesterase n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XT35_9CAUL Length = 744 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 5/125 (4%) Query: 130 LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 + EL E + + + + A++ + G + +DDFGTG ++ S LS IKI R Sbjct: 594 IELELTEGVLIDRGKGASTRLAALKDAGFSIAIDDFGTGYSSLSYLSRFPIGKIKIDRSF 653 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 V + +S L S +L L VI EGVETP++W + QG+ SRP Sbjct: 654 VVDMGRSQCADVLVSSILQLGRSLNMRVIAEGVETPDQWLRLAAVGCNEFQGYLASRPVS 713 Query: 245 IETLN 249 + ++ Sbjct: 714 ADVID 718 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37646 Uncharacterized protein yhjH n=105 Tax=Enterobac... 342 9e-93 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 269 7e-71 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 268 2e-70 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 267 3e-70 UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 4e-69 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 262 9e-69 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 261 2e-68 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 261 2e-68 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 260 3e-68 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 258 1e-67 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 258 2e-67 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 1e-66 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 1e-66 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 1e-66 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 254 2e-66 UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Pho... 254 3e-66 UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 ... 253 3e-66 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 253 4e-66 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 251 1e-65 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 251 2e-65 UniRef50_B3E3S5 Diguanylate cyclase/phosphodiesterase with PAS/P... 250 4e-65 UniRef50_A0YP68 Hybrid signal transduction histidine kinase and ... 250 5e-65 UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseu... 249 6e-65 UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elon... 249 6e-65 UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (... 249 9e-65 UniRef50_Q21XF0 Response regulator receiver modulated diguanylat... 248 1e-64 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 248 1e-64 UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax... 248 1e-64 UniRef50_C6X932 Diguanylate phosphodiesterase n=1 Tax=Methylovor... 248 2e-64 UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 2e-64 UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 247 2e-64 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 2e-64 UniRef50_C3KBD8 Putative sensory box GGDEF/EAL domain protein n=... 247 3e-64 UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 T... 247 3e-64 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 247 3e-64 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 247 3e-64 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 247 3e-64 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 246 4e-64 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 246 4e-64 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 4e-64 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 246 5e-64 UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Ta... 246 6e-64 UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanoth... 246 6e-64 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 7e-64 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 246 8e-64 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 245 9e-64 UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=As... 245 1e-63 UniRef50_Q2BRN8 Signal transduction protein containing membrane,... 245 1e-63 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 245 1e-63 UniRef50_Q2W5V0 Predicted signal transduction protein containing... 245 1e-63 UniRef50_A3YAL9 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 245 1e-63 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 245 1e-63 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 245 2e-63 UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 2e-63 UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 244 2e-63 UniRef50_B5JXV5 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 2e-63 UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 244 2e-63 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 244 3e-63 UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 3e-63 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 244 3e-63 UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain prote... 243 3e-63 UniRef50_A1K7N7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 243 3e-63 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 243 4e-63 UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 4e-63 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 243 4e-63 UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 5e-63 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 5e-63 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 243 6e-63 UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 T... 242 7e-63 Sequences not found previously or not previously below threshold: UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 265 2e-69 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 261 2e-68 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 260 5e-68 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 258 1e-67 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 258 1e-67 UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 258 1e-67 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 257 2e-67 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 257 2e-67 UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria R... 257 2e-67 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 257 2e-67 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 257 3e-67 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 256 5e-67 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 256 5e-67 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 256 6e-67 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 256 6e-67 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 256 7e-67 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 255 8e-67 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 8e-67 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 9e-67 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 255 1e-66 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 255 1e-66 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 1e-66 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 255 1e-66 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 255 1e-66 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 254 2e-66 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 254 2e-66 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 254 2e-66 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 254 2e-66 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 254 2e-66 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 254 2e-66 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 254 2e-66 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 253 3e-66 UniRef50_Q2SPM3 Predicted signal transduction protein containing... 253 3e-66 UniRef50_A8FYM5 Signal transduction protein containing a membran... 253 3e-66 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 253 4e-66 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 253 4e-66 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 253 6e-66 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 253 6e-66 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 252 8e-66 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 252 8e-66 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 252 9e-66 UniRef50_Q89U68 Blr1551 protein n=1 Tax=Bradyrhizobium japonicum... 251 1e-65 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 251 1e-65 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 2e-65 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 2e-65 UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 2e-65 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 251 2e-65 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 251 2e-65 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 251 2e-65 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 250 3e-65 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 250 3e-65 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 250 3e-65 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 250 3e-65 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 250 5e-65 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 250 5e-65 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 250 5e-65 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 249 5e-65 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 249 7e-65 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 249 7e-65 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 9e-65 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 1e-64 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 248 1e-64 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 248 1e-64 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 1e-64 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 1e-64 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 1e-64 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 248 1e-64 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 248 2e-64 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 248 2e-64 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 248 2e-64 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 248 2e-64 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 247 2e-64 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 2e-64 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 2e-64 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 2e-64 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 3e-64 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 247 3e-64 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 247 3e-64 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 4e-64 UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 246 4e-64 UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 4e-64 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 4e-64 UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Di... 246 5e-64 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 246 5e-64 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 246 5e-64 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 6e-64 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 246 6e-64 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 246 6e-64 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 6e-64 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 6e-64 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 6e-64 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 246 7e-64 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 246 7e-64 UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacte... 245 8e-64 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 8e-64 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 245 9e-64 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 245 9e-64 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 245 9e-64 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 245 9e-64 UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 1e-63 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 1e-63 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 245 1e-63 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 245 1e-63 UniRef50_A0YBW6 Predicted signal transduction protein containing... 245 1e-63 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 245 1e-63 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 245 1e-63 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 245 2e-63 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 245 2e-63 UniRef50_C1DB08 Predicted signal transduction protein containing... 244 2e-63 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 2e-63 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 244 2e-63 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 2e-63 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 244 2e-63 UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 2e-63 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 244 2e-63 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 244 3e-63 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 244 3e-63 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 244 3e-63 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 244 3e-63 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 244 3e-63 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 3e-63 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 3e-63 UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi ... 244 3e-63 UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Co... 244 3e-63 UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 3e-63 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 244 3e-63 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 243 3e-63 UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acineto... 243 3e-63 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 243 3e-63 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 243 3e-63 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 243 3e-63 UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulate... 243 3e-63 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 3e-63 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 3e-63 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 243 4e-63 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 243 4e-63 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 243 4e-63 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 4e-63 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 243 4e-63 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 4e-63 UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 243 4e-63 UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 4e-63 UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 4e-63 UniRef50_B7KI79 Response regulator receiver modulated diguanylat... 243 4e-63 UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 5e-63 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 5e-63 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 5e-63 UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 243 5e-63 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 6e-63 UniRef50_C6QF35 Diguanylate phosphodiesterase n=1 Tax=Hyphomicro... 243 6e-63 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 6e-63 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 6e-63 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 6e-63 UniRef50_Q1YRT2 Putative uncharacterized protein n=1 Tax=gamma p... 243 6e-63 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 243 6e-63 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 7e-63 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 7e-63 UniRef50_Q2SG37 Predicted signal transduction protein containing... 242 7e-63 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 7e-63 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 7e-63 UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 7e-63 UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 7e-63 UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 7e-63 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 8e-63 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 242 8e-63 UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 8e-63 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 242 8e-63 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 8e-63 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 242 8e-63 UniRef50_A9BVF0 Diguanylate cyclase/phosphodiesterase n=2 Tax=ce... 242 8e-63 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 8e-63 UniRef50_A1SWE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 8e-63 UniRef50_Q2IV14 Diguanylate cyclase/phosphodiesterase n=4 Tax=Rh... 242 8e-63 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 8e-63 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 242 8e-63 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 9e-63 UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum... 242 9e-63 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 9e-63 UniRef50_Q07T95 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 242 9e-63 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 242 9e-63 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 242 9e-63 >UniRef50_P37646 Uncharacterized protein yhjH n=105 Tax=Enterobacteriaceae RepID=YHJH_ECOLI Length = 255 Score = 342 bits (877), Expect = 9e-93, Method: Composition-based stats. Identities = 255/255 (100%), Positives = 255/255 (100%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS Sbjct: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 Query: 61 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI 120 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI Sbjct: 61 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI 120 Query: 121 LRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI 180 LRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI Sbjct: 121 LRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI 180 Query: 181 ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS 240 ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS Sbjct: 181 ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS 240 Query: 241 RPAPIETLNTAVLAL 255 RPAPIETLNTAVLAL Sbjct: 241 RPAPIETLNTAVLAL 255 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 269 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q ++R +L + F + +QP + G+++ VE L HP Sbjct: 681 MNAQTLRRFELENNLRRALDRKEFVI------YYQPQVEIHTGKIVGVEALIRWQHP--Q 732 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + +++ D + +VN+ + Sbjct: 733 RGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSP-MRVTVNLSARQFLQP 791 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 I +E WL E+ E + + + T + + G L +DDFGTG + Sbjct: 792 HLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYS 851 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + D +KI R L + + S ++ L + V+ EGVET E+ Sbjct: 852 SLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMF 911 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ ++P P+ L L+ Sbjct: 912 LRQQQCDLMQGYLFTKPLPVRELEQKYLS 940 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 30/270 (11%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++V+QR+ + ++++ F L +QP G+++ E L HP Sbjct: 591 MNQKVLQRLDIENSLRRAIEKEEFVL------FYQPQIDIKTGKIVGFEALLRWYHPDY- 643 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQ-IDLLAQKADFFIEHGL---LASVNIDGPTLIALR 115 +PP + S + V+ E ++ ++ +IE GL L SVN+ Sbjct: 644 -GLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQF---- 698 Query: 116 QQPKILRQIERL--------PWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGT 162 Q+ I+ I+R+ L E+ E + S + + G + LDDFGT Sbjct: 699 QRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGT 758 Query: 163 GMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEE 222 G ++ + L ++ D +KI + +R + + + ++ L ++ V+ EGVET E+ Sbjct: 759 GYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQ 818 Query: 223 WRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ AQG+ S+P P E + + Sbjct: 819 LLFLKKEKCDKAQGYLFSKPLPAEEIEKML 848 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 99/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++R+ +++ F L +QP G+++ VE L HP Sbjct: 684 MNERALERLRLEGDLRNAMERGEFILH------YQPQLDLRTGKIVGVEALIRWQHP--E 735 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP R+ + + V++E + + L SVN+ Sbjct: 736 LGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLG-SLRMSVNLSARQFAQQ 794 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I +E L EL E + + + G L +DDFGTG + Sbjct: 795 DLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYS 854 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + P+ + + ++ L + VI EGVET E+ Sbjct: 855 SLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAY 914 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q QG+F SRP + + + Sbjct: 915 LQQHDCDQIQGYFFSRPITADAMEVML 941 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 101/270 (37%), Gaps = 25/270 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIY-QTCGRLMAVELLTVVTHPLNP 59 M +I+ + + ++L++ F L +QP GR++ E L HP Sbjct: 976 MNEHLIKTLEMENSLRQALEKNEFQL------YYQPKVEHATGRIIGCEALLRWRHP--Q 1027 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTL--- 111 +PP + + + V+ E + L +VNI Sbjct: 1028 RGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPP-LTMAVNISARQFYQG 1086 Query: 112 -IALRQQPKILRQIERLP-WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGM 164 ++ L + + +P L EL E + + + T + + G L LDDFGTG Sbjct: 1087 ENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGY 1146 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + L D +KI R + + + + ++ + + + EGVE ++ Sbjct: 1147 SSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLA 1206 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 V N QG+ SRP P E LA Sbjct: 1207 LVANCGCNYIQGYLFSRPLPPEDFVALFLA 1236 >UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LR02_DESBD Length = 1158 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 23/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M QV+Q + ++L E F L +QPIY G +L E L HP Sbjct: 891 MYEQVVQTVQLENDLRQALVEDEFEL------FFQPIYALSGQKLRGFEALIRWNHP--Q 942 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 LPP + + + V++ +LA F + S+N+ L+ Sbjct: 943 RGHLPPGEFIPVAEETGLVTEIGKWVMRRGCRVLAGWQSQFPGLDISLSLNLSPKDLLQA 1002 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 P + + L+ E+ E + S + + G + +DDFGTG + Sbjct: 1003 SLVPVLTELLHETGLDARHLKLEITETAVMDNPEQATSRLERLQKMGFQIAMDDFGTGYS 1062 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI R + ++P + ++ L ++ EGVET ++ Sbjct: 1063 SLSYLQRLPIDILKIDRSFVQTMLENPNNLEIIKAIIGLGKILDLRIVAEGVETRQQLET 1122 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +Q AQG+ L RP E + + A Sbjct: 1123 LQELGCDLAQGFLLGRPMSKEQTESLISA 1151 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 22/264 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M VI+R + L +++F L +QP + GR+ VE L HP+ Sbjct: 642 MEEAVIKRAKIEADLRQGLIKKQFLLH------YQPQIFSNGRMTGVEALVRWQHPVR-- 693 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V++ LA+ A L +VN+ Sbjct: 694 GLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSVQQFHQPE 753 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPK-----DSTFASMCEFGPLWLDDFGTGMAN 166 I I L+ EL E + FA + LDDFGTG ++ Sbjct: 754 FVDHIQEVIRVTGANPERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDDFGTGYSS 813 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D +KI + + P T+ +++L VI EGVET + + Sbjct: 814 LSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVETEAQRNFL 873 Query: 227 QNSPAFAAQGWFLSRPAPIETLNT 250 + S + QG+F SRP PIE Sbjct: 874 ETSGCHSCQGYFFSRPLPIEEFEE 897 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 107/268 (39%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q ++R+ ++++++ F +QPI+ T G+L+ E L H + Sbjct: 439 MHEQAVKRLQMEIELRQAIEQQEFIAH------YQPIFSLTTGKLIGFEALIRWQH--SQ 490 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKAD-FFIEHGLLASVNIDGPTLIA 113 + P + + + ++ E L Q + + EH L SVN+ L Sbjct: 491 KGLISPAEFIPIAEETGLIVPMGKWILLEACTQLKQWQEQYDHEHILQISVNLSSKQLRD 550 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEF----GPLWLDDFGTGM 164 +I + + L+ E+ E + + D+ + + L LDDFGTG Sbjct: 551 PYLVQEIDKILTHTEINPQNLKIEITESLLMENFDTAMNILLQLQERNTQLCLDDFGTGY 610 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L D +KI R + + + ++ L + VI EG+ET + Sbjct: 611 SSLSYLHRFPVDILKIDRSFVMQMHSGNNNLEIIRTIITLAHSLNMRVIAEGIETESQLS 670 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ QG+ S+P P E + + Sbjct: 671 QLKSLNCEQGQGYLFSKPVPQEVAESLI 698 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 94/262 (35%), Gaps = 23/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M +R++ +++ + E +QPI G + A E L HP Sbjct: 317 MNAASAERLTLEAELRHAVE------RGELRLFYQPIVDPDGTVRAAEALVRWQHP--EQ 368 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L PDR+ + + V+ E D E SVN+ R Sbjct: 369 GLLAPDRFIPLADETGLITEIGAWVLTEACYQGRCWHDAGHER-FRVSVNVSAVQFGQPR 427 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 + + + L E+ E + S+ G + +DDFGTG ++ Sbjct: 428 LLETVREALRGSGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSS 487 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + + E + ++ L + G + EGVET E+ + Sbjct: 488 LSYLRRLPIDTVKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATL 547 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + + QG+ RP P E Sbjct: 548 RREGCDSFQGYRYGRPVPAEVF 569 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 101/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R + ++++ +F L +Q E L HP + Sbjct: 630 MQETIAKRTALEGDLRKAIENHQFQLH------YQIQVDESRHPFGAEALIRWFHPEH-- 681 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + PD++ S + V++ + + G + SVN+ Sbjct: 682 GMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQTD 741 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ I++ L+ EL E + L T +++ E G LDDFGTG ++ Sbjct: 742 FVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSS 801 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D +KI + + R + ++ + + VI EGVET E+ + + Sbjct: 802 LQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHL 861 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ +P PIE T++ Sbjct: 862 SSKGCKNFQGYLFGKPVPIEQFETSL 887 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 100/269 (37%), Gaps = 22/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + V R++ +L + L +Q R + E L HP+ Sbjct: 870 MQQAVEARVTLENDLRHALPNDQLQL------YYQIQVDNDRRAIGAEALVRWIHPIR-- 921 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+K LA AD + L+ +VN+ + Sbjct: 922 GMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQVG 981 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKDSTFAS----MCEFG-PLWLDDFGTGMAN 166 I I L+ EL E + L S + G L +DDFGTG ++ Sbjct: 982 FVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSS 1041 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + + ++ + + VI EGVET + + Sbjct: 1042 LSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFL 1101 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 + + QG++ +PAPIE + + AL Sbjct: 1102 KQNGCMCYQGYYFGKPAPIEQFQSQLEAL 1130 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 260 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q+ +R+ +++ F L +QP GR++ +E L HP Sbjct: 591 MREQINERMQMENHLRQAILRNEFELH------YQPQVDLGTGRIIGMEALVRWNHP--E 642 Query: 60 SQRLPPDRYFTEIT-----VSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P+++ + V+ E ++Q + +E + SVNI L + Sbjct: 643 WGMVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLE-AVCISVNISARQLKSR 701 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMA 165 I + + L E+ E + + T M E L +DDFGTG + Sbjct: 702 YLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYS 761 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI R + P + + + L G++ EGVET + Sbjct: 762 SLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEY 821 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ +AQG++ S+P P + V Sbjct: 822 LRAQGCDSAQGYYFSKPLPANNIMAFV 848 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 102/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R+ + F L +QP GR+ VE L HP Sbjct: 431 MHEGARDRMFLEIDLRHATLRNEFVL------YYQPKASCADGRITGVEALLRWQHP--E 482 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD++ + + + V++E + + SVN+ L A Sbjct: 483 RGIVSPDQFIPLLEETGLIVQVGRWVLEEACRQAVEWQAAGLNIP-SVSVNLSARQLQAE 541 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + +E+ L E+ E + + T +++ + G + LDDFGTG + Sbjct: 542 TLLTDVAATLEKTGLNAACLDLEITESMLMDNADMAIQTLSALKKMGVTISLDDFGTGYS 601 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D IK+ R + + ++ ++ + + V+ EGVETPE+ Sbjct: 602 SLAYLKRFPLDAIKVDRSFVQDIAADSDDASITRAVITMAHHLKLKVVAEGVETPEQLAL 661 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + + QG+F SRP P + +++ Sbjct: 662 LISHQCDVIQGYFFSRPMPASGMTELLVS 690 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 98/262 (37%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M +V++ + +L F L +QP G+L E L HP Sbjct: 651 MQAKVLEHAAMANDIRHALTRNEFTL------YYQPQVTHDGQLTGAEALIRWQHP--KQ 702 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+ + +LA + + L+ ++NI Sbjct: 703 GTISPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTG 762 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 ++L ++R L+ EL E + + T M + LDDFGTG ++ Sbjct: 763 FVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSS 822 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI + L + + ++ L VI EGVET E+ + Sbjct: 823 LNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLAL 882 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + QG+ SRP P+E Sbjct: 883 ASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASF8_PELPD Length = 1023 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 24/258 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M R+ ++R + + ++ F+L +QP + +L VE L P Sbjct: 374 MNRKAMERFAIETCMLRAIDAGEFFL------CYQPKVEIHDMKLTGVEALVRWQRP--G 425 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PPDR+ + + ++ E D + + SVNI L Sbjct: 426 EGVIPPDRFIALAEENGMIVRLGGWILGEACRQNRAWQDAGLPRTV-VSVNISARQLREN 484 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFGP-LWLDDFGTGMA 165 ++ R +E +L EL E + + + + G + +DDFGTG + Sbjct: 485 SFVEQVERILEETGLEPCYLDLELTESVVMANSDEIVQKLTRLKQLGVGISVDDFGTGYS 544 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D IK+ R + P+ + + ++ + + VI EGVET E+ Sbjct: 545 SLSYLKHLPVDTIKVDRSFVRDIVHDPDDKAIVEAVIAMGHALGLTVIAEGVETLEQLEF 604 Query: 226 VQNSPAFAAQGWFLSRPA 243 +++ AQG++ S+P Sbjct: 605 LRSQNCNQAQGYYFSKPL 622 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 103/267 (38%), Gaps = 20/267 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHP---- 56 M ++ Q + +++ + +F L +QP GR++ E L HP Sbjct: 671 MQAELEQASALVVDLRQAIWQGQFQLH------YQPQTANDGRIIGAEALLRWRHPERGP 724 Query: 57 LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 ++P Q +P I R V++E LA AD +VN+ Sbjct: 725 VSPMQFIPLAEESNLILAIGRW-VLEEACGQLAAWADLPAAGNCKLAVNVSARQFRQPEF 783 Query: 117 QPKILRQIERL----PWLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMANF 167 +I R + L+ EL E I + + T + M E L +DDFGTG ++ Sbjct: 784 VAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQELRDLGIGFSMDDFGTGYSSL 843 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L + + +KI R L P + ++ + VI EGVET E+ + Sbjct: 844 AQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKEQLATLA 903 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 A QG+ SRP P + + Sbjct: 904 RYGCDAYQGYLFSRPVPAAQFAHLLTS 930 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 100/264 (37%), Gaps = 18/264 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M R ++++ L +QP T GRL+ E L HP Sbjct: 433 MDEAEAARRDLERDLRQAIEGDELIL------YYQPQVSTGTGRLLGFEALVRWEHPTR- 485 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 +PP+ + S + + E + A + H L +VN+ + Sbjct: 486 -GLVPPNAFIPLAEESGLILPLGEWVLRAACREAARWAHPLKVAVNLSPRQFQQADLPER 544 Query: 120 ILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSAL 170 +L + L E+ E + + + + FG + +DDFGTG ++ + L Sbjct: 545 VLAILTETGLAPTRLELEITETLIINDMARALGILRRLKAFGVSIAMDDFGTGYSSLATL 604 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI R + SP+ + +L L V+ EGVET + R + Sbjct: 605 QAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDAQMRFLAAEA 664 Query: 231 AFAAQGWFLSRPAPIETLNTAVLA 254 AQG+ +S+P PIE + A Sbjct: 665 CDEAQGYLISKPQPIERFAEQIDA 688 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 105/263 (39%), Gaps = 24/263 (9%) Query: 5 VIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNPSQRL 63 I R++ ++++ F L +QP I T G ++ +E L HP + Sbjct: 269 AINRLNMESEMRKAIERGEFVLH------YQPQINATSGHVVGMEALIRWQHP--ERGMI 320 Query: 64 PPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQP 118 PP + + + + V+ E D + L +VN+ + Sbjct: 321 PPYHFISVAEETGMIVPIGEWVMYEACRQNKAWHDAGLAE-LKVAVNLSARQFSDRKLLD 379 Query: 119 KILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMANFSA 169 K+ +++ +L E+ E + + ++T A + E L +DDFGTG ++ + Sbjct: 380 KVRHALKQSGLNPAFLELEITESVIMKDIEATIALLEEIASMGLSLAIDDFGTGYSSLNY 439 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L D +KI + + S + + ++ L + VI EGVE E++ +Q Sbjct: 440 LKRFPIDKLKIDKSFIDDVISSEDDGKIVEAIIGLSHNLKLNVICEGVEDAEQFAWLQER 499 Query: 230 PAFAAQGWFLSRPAPIETLNTAV 252 QG++ S+P P + V Sbjct: 500 QCNEIQGYYFSKPLPADEFEAFV 522 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 90/262 (34%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M R + LQ+R L +QP+ GRL E L HP Sbjct: 568 MQAAASHRSALEADLRRGLQQRELVLH------YQPMVDGQGRLQGAEALVRWNHP--QR 619 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V++ L + + SVN+ Sbjct: 620 GLMPPAEFTPLAEQTGLILPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQFRQAD 679 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 ++L +E L EL E + L A M + LDDFGTG ++ Sbjct: 680 FVQQLLATLEASGANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGYSS 739 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D IKI R L + +L L V+ EGVET + + Sbjct: 740 LSQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLEFL 799 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 Q+ QG+ RP P E L Sbjct: 800 QHHGCQTFQGYHFGRPMPPEAL 821 >UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria RepID=A6SW06_JANMA Length = 459 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 102/268 (38%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R ++LQ+ + L +QP GR++ E L HP+ Sbjct: 178 MQADLSERNVMEADLRKALQDNQLML------YYQPQTGNDGRIVGAEALLRWRHPVK-- 229 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+ L + L ++N+ Sbjct: 230 GMVSPADFIPLAEQTGLILPIGHWVLGMACAQLISWSKHPATAQLSLAINVSALQFKQPD 289 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDSTF----ASMCEFG-PLWLDDFGTGMAN 166 +++ ++R L EL E + + + ++ E G L LDDFGTG ++ Sbjct: 290 FVSQVVSVLDRSGADPHLLELELTESMLVNDVNDIIAKMNALKEKGLRLSLDDFGTGYSS 349 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D +KI + + T+ ++ L VI EGVET E+ + + Sbjct: 350 LSYLKKLPLDQLKIDQSFVRDMLFDSNDVTIVRTVVELARGMGLHVIAEGVETQEQRQFL 409 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ LSRP P VLA Sbjct: 410 AELGCLSFQGYLLSRPVPNAEFEAVVLA 437 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 91/263 (34%), Gaps = 22/263 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M QV R + + + QPI RL E L HP+ Sbjct: 844 MQAQVTARSQLESDLRQGIARHELTVHL------QPIVDGSTRLCGAEALVRWRHPVK-- 895 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + +V++ + L + A +VN+ Sbjct: 896 GLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNVSARQFRQPD 955 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMAN 166 ++L + L+ EL E + L + T M + + LDDFGTG ++ Sbjct: 956 FVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSS 1015 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P + +L L V+ EGVET + + Sbjct: 1016 LSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFL 1075 Query: 227 QNSPAFAAQGWFLSRPAPIETLN 249 + QG+ RP P+E Sbjct: 1076 KLHGCEGFQGYLFGRPVPLEAFE 1098 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 93/269 (34%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + ++R+ +L+ F L +QP + GR L E L HP Sbjct: 1147 MNARALERLELESDLRRALELGEFVLH------YQPQFTGDGRRLTGAEALLRWQHPRR- 1199 Query: 60 SQRLPPDRYFTEITVSH-----RMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + ++ E L + SVN+ Sbjct: 1200 -GLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVP-KVSVNLSARQFADG 1257 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + +I + L EL E I + + + + G + +DDFGTG + Sbjct: 1258 QLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYS 1317 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + D +KI R L + + ++ + + VI EGVE+ + Sbjct: 1318 SLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDF 1377 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ RP P E + Sbjct: 1378 LREHGCDEVQGYLFGRPMPAEQFGMLYAS 1406 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 95/266 (35%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M R+ ++R+ +LQ + + +QP+ + +++ +E L HP Sbjct: 612 MNRKTLERMMLENNLRNALQHDQLII------YYQPLVDSTNQIVGMEALLRWHHP--EL 663 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ + + V++ + + +VN+ Sbjct: 664 GLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTR-FYVAVNLSVRQFREPD 722 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMAN 166 I + +E L+ E+ E + + A M +DDFGTG ++ Sbjct: 723 LVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSS 782 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L D +KI R + + + + + ++ + + EGVE E+ + Sbjct: 783 LSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFL 842 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG++ RP P E + Sbjct: 843 IHHGCHMMQGYYFGRPMPAEKFEDML 868 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 97/269 (36%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++++R+ + +L+ L +QP GR++ E L HP Sbjct: 820 MNERILERLELENSLRRALENDELELH------YQPKVSLRDGRVIGAEALIRWRHP--Q 871 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + VV L D + + +VN+ Sbjct: 872 LGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQ-ISVAVNVSARQFQHE 930 Query: 115 RQQPKILRQI--ERLP--WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + R + RLP L E+ E + + T + G + LDDFGTG Sbjct: 931 QLTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYC 990 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D IKI R L S E + ++ L + + VI EGVE + Sbjct: 991 SLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDF 1050 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ SRP P + A Sbjct: 1051 LRRHGCDEMQGFLFSRPLPAAEFARLLAA 1079 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 256 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 102/265 (38%), Gaps = 20/265 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHP---- 56 M++ V+ R + +L+ L +QP+ G ++ E L HP Sbjct: 589 MLQAVLARAALESELRLALESDELLLH------YQPLVNGDGSMLGAEALVRWRHPQRGL 642 Query: 57 LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P + +P + V+ V++ L + L+ +VN+ Sbjct: 643 VMPGEFIPAAEQ-GGLIVALGQWVLERACAQLVAWSRSAATAQLVLAVNVSVRQFRQPDF 701 Query: 117 QPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMANF 167 ++L+ + R L+ EL E + + + A M + +DDFGTG ++ Sbjct: 702 VDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGTGYSSL 761 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L + D +KI + + P + +L L V+ EGVET + + +Q Sbjct: 762 AYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQLKFLQ 821 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAV 252 A QG RPAP L A+ Sbjct: 822 RHGCKAFQGHLFGRPAPAAVLERAL 846 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 256 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 103/264 (39%), Gaps = 24/264 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M +R+ E+L L+ E +QP+ T + E L HP Sbjct: 589 MTAAAAERLHLENDLREAL------LRGEFELYYQPVLDTERLTVCGAEALLRWHHP--E 640 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + +PPDR+ + + V++E A+ + G+ SVN+ G Sbjct: 641 AGLIPPDRFIPLAEETGLIRPIGTWVLREACAQAARWRRLGL-TGMTVSVNVSGEQFWRD 699 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRL----PKDSTFASMCEFGP-LWLDDFGTGMA 165 + + +E L E+ E + + ++ + G L LDDFGTG + Sbjct: 700 ELPQAVRQALEAQALAPDALVLEITESVLMHGSANTETRLRELKAMGVGLSLDDFGTGYS 759 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI + + + RTL ++ + + V+ EGVE+ E Sbjct: 760 SLSYLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPL 819 Query: 226 VQNSPAFAAQGWFLSRPAPIETLN 249 ++ + QG+ SRP P L+ Sbjct: 820 LRRARCDRVQGYHFSRPLPARALS 843 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 100/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + + L + E +QP+ RL+ VE L HP+ Sbjct: 569 MQAAVNARSNLEADLRQGL------ARGELCVYYQPVVDHRARLLGVEALVRWRHPVR-- 620 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + +V++ L + + L SVN+ Sbjct: 621 GMISPADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPG 680 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 ++L+ ++ L+ EL E + L + T A M + LDDFGTG ++ Sbjct: 681 FVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSS 740 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P + +L L V+ EGVET + + Sbjct: 741 LSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFL 800 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ RP P+E ++ + Sbjct: 801 RLHGCEGFQGYLFGRPGPVEDIDAYL 826 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 110/262 (41%), Gaps = 24/262 (9%) Query: 6 IQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQRLP 64 +++ + ++L++ F L +QPI G ++AVE L HP + Sbjct: 292 EEKLYIQHSIRKALKQNEFTLH------YQPIVDIQTGDIVAVEALLRWFHPKR--GWIS 343 Query: 65 PDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA---LRQ 116 P + ++ + V++ + + + + H + VN+ + ++ Sbjct: 344 PATFIPIAEETNLIQPIGDWVLRNVCEQSKKWKEKGLPH-VQIGVNVSIKQFLQADLVKH 402 Query: 117 QPKILRQIERLPW-LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 +LR + P+ L+ E+ E + + + S+ G L +DDFGTG ++ + L Sbjct: 403 IEHVLRTYDLDPFCLKLEITESMAMHHIDYVLAQLQSLKHLGLQLAVDDFGTGYSSLNYL 462 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 ++ D IKI R + + ++ ++ + + V+ EGVET E+ ++ Sbjct: 463 KKLPVDIIKIDRSFVQDMVKHSYDLSIVRAVIQVAHSLQMKVVAEGVETEEQLAILKREG 522 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 AQG++ S+P E V Sbjct: 523 CDRAQGYYFSKPLAAEQFEQLV 544 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 97/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + + R++ +++++ +F L +Q R + E L HP + Sbjct: 751 MQQSLSARLALELELRKAIEKDQFQL------YYQIQVDETHRPLGAEALLRWMHPEH-- 802 Query: 61 QRLPPDRYFTEITVSH-----RMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + V++ L + L+ S+N+ Sbjct: 803 GLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPD 862 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 ++ ++ L+ EL E I L D+T M LDDFGTG ++ Sbjct: 863 FVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSS 922 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D +KI + + + S ++ + GVI EGVET E+ + + Sbjct: 923 LQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLL 982 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ S+P P+E + Sbjct: 983 LRKGCNHFQGYLFSKPVPVEQFEKLL 1008 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 97/268 (36%), Gaps = 27/268 (10%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + RI +++ + +F L +QP + G L+ E L HP Sbjct: 525 MNSRAKTRIELESYLRKAVNQDQFVL------YYQPQFDIQSGELVGCEALLRWQHP--Q 576 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P+ + + + V++E + D + +VNI Sbjct: 577 MGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHSP-IRVAVNISPRQFREP 635 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMA 165 I R ++ + WL E+ E + + DS + + L +DDFGTG + Sbjct: 636 GFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYS 695 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI R + ++ ++ L + V+ EG+ET E+ Sbjct: 696 SLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLF 755 Query: 226 VQNSPAFAAQGWFLSRPA---PIETLNT 250 ++ QG+ S P P + T Sbjct: 756 LKEKGCEVGQGYLYSPPVAKEPFDHFFT 783 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 99/269 (36%), Gaps = 22/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + R+ ++++R F L +QPI G L+ E L HP Sbjct: 766 MQADALARVHLEADLRMAVEQRAFELH------YQPIVDCASGALVGAEALIRWKHP--E 817 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQI--DLLAQKADFFIE--HGLLASVNIDGPTLIALR 115 + P + + + E + +++ Q+ D+ L ++N+ G Sbjct: 818 RGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREAG 877 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLP-KDSTFASMCEFGP----LWLDDFGTGMAN 166 + + L FE+ E + + ++ A MC+ LDDFGTG ++ Sbjct: 878 LPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFSS 937 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L D +KI R TL ++++ + V EGVE+ E+ + Sbjct: 938 LSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFL 997 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 + QG+ + +P + + L Sbjct: 998 RALGCDYLQGYLIGKPLAADAFEALMAPL 1026 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 101/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + +R+S +L+ F L +QP G++ +E L HP Sbjct: 362 MNARAFERLSLENDMRRALERDEFVLH------YQPKVNVEHGQIACMEALVRWQHPSM- 414 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHG----LLASVNIDGPTLIALR 115 +PP R+ + + + E + A + + + + +VN+ L Sbjct: 415 -GLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGD 473 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + R + WL E+ E I + TF + G + +DDFGTG ++ Sbjct: 474 LSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSS 533 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + +KI R + +P+ + ++ + GV+ EGVET E+ + Sbjct: 534 LHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVL 593 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ S PAP E + Sbjct: 594 RALNCRYMQGFLFSEPAPAEQFTPVL 619 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 104/262 (39%), Gaps = 20/262 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHP---- 56 M ++ R S ++++++ A +Q R++ E L HP Sbjct: 578 MQEKLSVRASLESELRYAIEKQQL------ALYYQVQVDDNQRMVGAEALIRWIHPERGT 631 Query: 57 LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 ++P + +P + + + V+ LA+ A + L+ +VN+ AL Sbjct: 632 VSPIEFIPIAEE-SALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSAHQFRALDF 690 Query: 117 QPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMANF 167 + I+ L+ EL E + L D A M L LDDFGTG ++ Sbjct: 691 VQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLDDFGTGYSSL 750 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L ++ D +KI + L P + ++ L N + VI EGVET E ++ Sbjct: 751 SYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVETELELDILK 810 Query: 228 NSPAFAAQGWFLSRPAPIETLN 249 QG+ RP PIE L Sbjct: 811 GYGCRLYQGYLFGRPVPIEQLQ 832 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 99/266 (37%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V+QR + ++++ +F L +Q R+ E L HP Sbjct: 768 MQTVVVQRAALEAGLRNAIEDNQFLLH------YQAQVVGT-RVTGAEALVRWQHP--QR 818 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V++ LA+ A L +VN+ Sbjct: 819 GIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKAD 878 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFGPL-WLDDFGTGMAN 166 +L I R L+ EL E + + +++ G + LDDFG G ++ Sbjct: 879 FVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSS 938 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI R + + ++ L GVI EGVET + + Sbjct: 939 LSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFL 998 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + +A QG++ RP PIE + Sbjct: 999 AAAGCYAYQGYYFCRPLPIEDFEALL 1024 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 100/266 (37%), Gaps = 20/266 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHP---- 56 M V R +L +F L +QP G + VE L HP Sbjct: 1235 MQAVVTARAELENDLRTALAREQFMLH------YQPQIDRRGSVTGVEALVRWPHPQRGM 1288 Query: 57 LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 ++P + +P + R V+ LA+ L +VN+ Sbjct: 1289 VSPGEFIPLAEETGLVLPLGRW-VLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAF 1347 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMANF 167 ++R I L+ EL E + + +T A++ G LDDFGTG ++ Sbjct: 1348 VEDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSL 1407 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L + D +KI + L P + ++ L VI EGVET E+ ++ Sbjct: 1408 SYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLE 1467 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVL 253 + A QG+F SRP P L ++ Sbjct: 1468 QAGCRAYQGYFFSRPLPETALEDFLV 1493 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 22/262 (8%) Query: 5 VIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRL 63 V+ R++ + +L+ F + +QP GR+ +E L P + Sbjct: 699 VLARLTMEKYLRRALERDEFLVH------YQPKVDLLSGRITGMEALVRWQSP--ELGFI 750 Query: 64 PPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHG----LLASVNIDGPTLIALRQQPK 119 P + + + + E + A + + ++ +VN+ Sbjct: 751 SPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADT 810 Query: 120 ILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSAL 170 + R E ++ E+VE + + + ++ E G L +DDFGTG ++ S L Sbjct: 811 VHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYL 870 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D +KI + + + P + ++ L + V+ EG+ET + ++ Sbjct: 871 KRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLA 930 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG++ SRP P + Sbjct: 931 CDEMQGFYFSRPVPAAEFEQML 952 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 94/262 (35%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + + L + +QP+ RLM E L HP Sbjct: 590 MQAAVNARSNLEADLRQGLARAELLV------YYQPVVDHQARLMGAEALVRWRHP--QR 641 Query: 61 QRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ L + + GL SVN+ Sbjct: 642 GMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQFRQPG 701 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 ++L Q++ L+ EL E + L + T A M + LDDFGTG ++ Sbjct: 702 FVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSS 761 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D IKI + + P + +L L V+ EGVET + + Sbjct: 762 LSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFL 821 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 Q QG+ RP P+E Sbjct: 822 QLHGCEGFQGYLFGRPVPMEVF 843 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 102/265 (38%), Gaps = 20/265 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHP---- 56 M +I R +++++ +F L +Q + G+ + E L HP Sbjct: 517 MQESIIARADMERDLRKAIEDNQFQLH------YQAQVSSSGQTLGAEALIRWQHPERGQ 570 Query: 57 LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 ++P +P I + V+ L + L+ +VNI L Sbjct: 571 VSPFNFIPLAEETGLILPIGQW-VLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDF 629 Query: 117 QPKILRQIERLP----WLRFELVEHIRLPKDSTF----ASMCEFG-PLWLDDFGTGMANF 167 ++ ++R L+ EL E + + S + + G LDDFGTG ++ Sbjct: 630 VEQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSL 689 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 L ++ + IKI + L R + ++ + + VI EGVET EE + + Sbjct: 690 QYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLL 749 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ S+P PI + Sbjct: 750 DNGCTHYQGYLFSKPVPINEFEVLL 774 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 103/266 (38%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + + ++ A +L+ + L +QP GR++ E L +HP Sbjct: 596 MQARSERTLTLENALRRALERNQLQLH------YQPQISLASGRVVGAEALLRWSHP--E 647 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQ-IDLLAQKADFFIEHGLL---ASVNIDGPTLIALR 115 +PP + + + E + Q+ +I+ G+L SVN+ Sbjct: 648 LGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHAD 707 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 + + L EL E++ + + ++ E G + +DDFGTG ++ Sbjct: 708 LPELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSS 767 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + R IKI + + + + + + ++ + I EGVET + + Sbjct: 768 LSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFL 827 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG++ SRP P+E + Sbjct: 828 KAKGCTEVQGYYFSRPLPVEQFEAFM 853 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 + + +RIS A ++L+ +F L +QP R++ E L HP Sbjct: 669 LDDSLKERISLENALNQALKLGQFEL------YYQPQLDVKSNRIIGAEALIRWNHP--E 720 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD + S + V+ + LAQ + L SVN+ + Sbjct: 721 KGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQ-LSVSVNLSALQVQKE 779 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEF----GPLWLDDFGTGMA 165 ++ I L EL E + + + T A++ + + +DDFGTG + Sbjct: 780 SFAREVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYS 839 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + + + ++ + + VI EGVET + Sbjct: 840 SLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLEL 899 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +++ QG+ ++P P+E + +LA Sbjct: 900 LRDYGCEQYQGYLFAKPLPVEQMTEHLLA 928 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 98/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q ++R+ +++ L +QP G ++ +E L HP+ Sbjct: 643 MNDQALERLRIEGELRHAIELNELVLH------YQPQVDLHTGAIVGLEALVRWNHPI-- 694 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + + V++ D L +VN+ Sbjct: 695 LGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQ-LRIAVNLSARQFTQA 753 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I ++ +L EL E + T + G L +DDFGTG + Sbjct: 754 SLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHS 813 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + + + ++ S ++ L + VI EGVET + Sbjct: 814 SLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDI 873 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ QG++ +P P + + T +L Sbjct: 874 LRAQGCNEIQGYYFCKPLPSDQIETLLL 901 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 96/268 (35%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + + + +L + L +QP G+++ VE L HP Sbjct: 327 MQENIEHKTTMEHELRMALSKEELIL------FYQPQVNLEGKIVGVEALLRWNHP--QK 378 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP+ + + + V+ L++ F L S+N+ Sbjct: 379 GLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEAS 438 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFGP-LWLDDFGTGMAN 166 + I ++ EL E + L + ++ G LDDFGTG ++ Sbjct: 439 FYETVANAIALSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSS 498 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + + ++ + + + VI EGVE E++ + Sbjct: 499 LSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFL 558 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ +P P E L LA Sbjct: 559 MENGCGLFQGYLFGKPMPPEELERLFLA 586 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R + EA +++E +F L +Q GR+ E+L HP Sbjct: 692 MEIALRERAAIEEALRYAIEEEQFLLH------YQAQIGEDGRIEGAEVLLRWQHP--ER 743 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+K+ LA+ A+ + GL+ +VN+ L Sbjct: 744 GMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQLRQPD 803 Query: 116 QQPKI---LRQIERLPW-LRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMAN 166 ++ LR+ P L+ EL E + + ++T A M + LDDFGTG ++ Sbjct: 804 FVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTGYSS 863 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI + + + S ++ L GVI EGVET + + Sbjct: 864 LSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEAQRELL 923 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ SRP PI V Sbjct: 924 AGIGCHCYQGYLFSRPLPIGDFERLV 949 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 105/270 (38%), Gaps = 24/270 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M R ++ ++ +++ ++ +L+ +QP+ G RL+ E L HP Sbjct: 939 MHRHTMEMMTLEGDLSMAMRRKQLYLE------YQPVLAVDGARLLGFEALVRWRHPTEG 992 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKAD-FFIEHGLLASVNIDGPTLIA 113 + +PP R+ + + V+++ LA+ H L SVN+ Sbjct: 993 A--VPPARFIPMAEETGLILRIGQWVLEQAAATLARWRATLPGAHDLYVSVNLSARQASQ 1050 Query: 114 LRQQPKILRQIERL----PWLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGM 164 ++ R + L+ E+ E + ++ G + +DDFGTG Sbjct: 1051 PNLTGRVARILSDTGLPPEALKLEITETAIMKDPDGALQRLEALRRLGVGIGIDDFGTGY 1110 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + L D +K+ R + E R + ++ L V+ EGVET E++ Sbjct: 1111 SSLAYLQRFPVDTLKVDRSFVSAVAGDAENREIVRTVVTLGRSLGLHVVAEGVETAEQFA 1170 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 V + QG+ SRP E + A Sbjct: 1171 IVAELGCHSVQGYHFSRPVAEERAVAFIAA 1200 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 98/267 (36%), Gaps = 22/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R+ E L+ F+L +QP GRL+ E L +P Sbjct: 686 MQALIADRVEMEEDLRNGLRNDEFFL------CYQPQVDNQGRLLGAEALLRWRNPKR-- 737 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + S + V+ L A + L +VN+ L + Sbjct: 738 GMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMD 797 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMAN 166 +I+ + L+ EL E + + + A M E + +DDFG G ++ Sbjct: 798 FVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSS 857 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P + ++ L VI EGVET + + Sbjct: 858 LSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFL 917 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 N A QG+ S+P P + V+ Sbjct: 918 DNYGCDAYQGYLFSKPVPADEFERDVV 944 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 101/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R++ ++L ++F L +Q GR + E L HP Sbjct: 551 MQDAVTARVALEGELHKALDRQQFRLH------YQIQVDASGRPLGAEALIRWMHP--ER 602 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PPD++ + + V+ L L+ +VN+ L Sbjct: 603 GLVPPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLD 662 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ ++R L+ EL E + L T ++ E G LDDFGTG ++ Sbjct: 663 FVFQVRATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSS 722 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D IKI + + R + ++ + VI EGVET E+ + + Sbjct: 723 LQYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFL 782 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 Q++ QG+ +P P+E + Sbjct: 783 QDNGCTHFQGYLFGKPVPVEQFEAML 808 >UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Photobacterium profundum RepID=Q1YXX2_PHOPR Length = 725 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + ++ + ++S E+ ++ +++F L +QP++ +L E L HP Sbjct: 464 LQKKALDKVSIEESLDTAISKKQFVLH------YQPVFNFYSNKLCCYEALIRWNHPR-- 515 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 L P+R+ S ++ V++E +++ + +VN+ Sbjct: 516 EGLLYPERFIGIAEESGKIKNIGYWVIQEVCNVIKMHQLHIGKRH-RIAVNLSPRQFNDP 574 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMA 165 I R I + +L E+ E + +S ++ +F L +DDFGTG + Sbjct: 575 DLLENIRRIIRNVGIDARFLEIEITESTLMENVESAIYTLRQFKELGITVAIDDFGTGYS 634 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + D +KI R L + + + L+ + + VI EG+ET E++ Sbjct: 635 SLAMLKRLPVDKLKIDRSFVKDLDSNNSDQKIVQALISMAHTLQISVIAEGIETQEQFNL 694 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q QG+ SRP PI LN A+ Sbjct: 695 LQQYGCDFGQGYLFSRPVPITELNGAM 721 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + +R+ A ++++ +F L +QP + GR++ VE L THP Sbjct: 378 MGEEAFKRMEMERALRYAIEKNQFKL------LYQPQVELSSGRILGVEALLRWTHP--E 429 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + I ++ + V+ E L +VN Sbjct: 430 WGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQFAQA 489 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + + +++ +L E+ E + ++ E G + +DDFGTG + Sbjct: 490 DLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFS 549 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + ++ + + + + + + VI EGVET + Sbjct: 550 SLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEF 609 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ SRP P E + + Sbjct: 610 LRGHGCDMIQGYLFSRPVPPEQIAEIL 636 >UniRef50_Q2SPM3 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPM3_HAHCH Length = 826 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M V +R+S +++++ + +QP T GR++ E L HP Sbjct: 559 MADAVSKRLSIENELRTAVKDKAL------MFYYQPQVSVTDGRIIGAEALIRWNHP--Q 610 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADF-FIEHGLLASVNIDGPTLIA 113 + PD + + S+ + ++ + + + D + E + +VN+ Sbjct: 611 RGLITPDEFVPVLENSNLILTAGLDMFTQACMQVKEWLDKGWWEEDMRVAVNVSPKQFYQ 670 Query: 114 LRQQPKILRQIE--RLP--WLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGM 164 +I+ +E RLP + E+ E + + T M L LDDFGTG Sbjct: 671 PEFVEQIIEILEATRLPAYCIELEVTESVVIQNVKDTINKMLSLKGLGVRFSLDDFGTGY 730 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + D +KI R + + S +L + V+ EGVET E Sbjct: 731 SSLSYLKRLPVDSLKIDRSFVTDINSDVNDAAIVSTILAMAAHLDLEVVAEGVETVEHLE 790 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ + QG+ S+P P E + + Sbjct: 791 FLKENECDYYQGYLFSKPLPAEEMGELL 818 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 21/268 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R+ ++L+ F L +QP + GR++ E L HP Sbjct: 786 MNQYAQERLELELDLRKALERDEFVLH------YQPQFDPNGRIIGCEALIRWQHP--DK 837 Query: 61 QRLPPDRYFTEITVSHRMEVVKEQ-IDLLAQKADFFIEHG---LLASVNIDGPTLIALRQ 116 L P + ++ + + + ID + ++ G L SVN+ G + Sbjct: 838 GLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDL 897 Query: 117 QPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMANF 167 + I L EL E I + + T ++ L +DDFGTG ++ Sbjct: 898 LETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSM 957 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L + +KI + L Q E + ++ + + VI EGVET E+ ++ Sbjct: 958 SCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLK 1017 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLAL 255 +S QG++ SRP + + AL Sbjct: 1018 SSRCEEFQGYYFSRPILAADIEQYLQAL 1045 >UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 Tax=Yersinia RepID=A7FEI0_YERP3 Length = 855 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 18/259 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M +++QRI + ++++ F L +QP Y+T +L+ E L HP+ Sbjct: 596 MNDRLMQRIELEKFLRLAVKKSEFCL------YYQPRYRTDDMQLIGAEALVRWNHPV-- 647 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 L PD++ + + + + L A + L+ SVNI + Sbjct: 648 LGLLMPDQFIALAEETGLITAISDWTLLQACQDAMTWPTSLIVSVNISAIEFRGQCLIER 707 Query: 120 ILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSAL 170 + + + L E+ E I + ++ G L +DDFGTG ++ + L Sbjct: 708 VRQALLVTGLPSHRLELEITERIMIEDADGALKIMTALKTLGIRLSIDDFGTGYSSLNYL 767 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D +KI + L +S EG+++ +++L + VI EGVET E+ +Q+ Sbjct: 768 HRFPFDGLKIDKSFIDKLTESHEGQSIVEGIINLGHAISMTVIAEGVETAEQLTYLQSLH 827 Query: 231 AFAAQGWFLSRPAPIETLN 249 QG+FL++P P+E L+ Sbjct: 828 CDEVQGYFLAKPMPVEALS 846 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 98/261 (37%), Gaps = 22/261 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M V +R +++ L +QP + G+++ VE L HP Sbjct: 967 MNTLVTERQQIETGLRQAIACNELLL------YYQPQVDISSGQVVGVEALIRWQHPELG 1020 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + +P I + V++ + LA+ D GL +VN+ L Sbjct: 1021 LVAPDRFIPIAEEIDMIIPIGQW-VLENALAQLAEWRDKG-AKGLRMAVNLSAHQLRKDT 1078 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLP----KDSTFASMCEFG-PLWLDDFGTGMAN 166 I+ + + L E+ E + + A + + G L +DDFGTG ++ Sbjct: 1079 IVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSS 1138 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +K+ R + P + + + + + V+ EGVE + + Sbjct: 1139 LSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLL 1198 Query: 227 QNSPAFAAQGWFLSRPAPIET 247 QG++ S+P + Sbjct: 1199 SGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 25/260 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M ++V++ I+ +++ L +QPI+ G +L E L HP + Sbjct: 992 MRQEVLEVINMENELRRAIEGNSLELH------YQPIFDVDGGKLEGFEALVRWRHPEH- 1044 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKAD--FFIEHGLLASVNIDGPTLI 112 + PDR+ S + VV L D E+GL SVN+ Sbjct: 1045 -GMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLTMSVNLSCKQFA 1103 Query: 113 ALRQQPKILRQIER----LPWLRFELVEHIRLPKDST----FASMCEFGPL-WLDDFGTG 163 ILR + P L+ E+ E + + + E G L +DDFGTG Sbjct: 1104 QHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLKEIGVLLAVDDFGTG 1163 Query: 164 MANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEW 223 ++ S L + D +KI R E + ++ + + V EGVET E+ Sbjct: 1164 YSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRVTAEGVETQEQL 1223 Query: 224 RDVQNSPAFAAQGWFLSRPA 243 +Q+ AQG+ S+P Sbjct: 1224 ERLQSINCDRAQGYMFSKPM 1243 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 104/267 (38%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + + +L E++F L + + RL E+L HP Sbjct: 567 MEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGE-------RLTGAEVLLRWQHP--QR 617 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ LAQ A L +VN+ Sbjct: 618 GMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQND 677 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMAN 166 ++L +E+ L+ EL E + + A++ G LDDFGTG ++ Sbjct: 678 FVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSS 737 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D++KI + + ++ ++ L N GVI EGVET + + Sbjct: 738 LSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFL 797 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 +S QG++ SRP PIE + L Sbjct: 798 ASSGCHTYQGYYFSRPLPIEDFESFTL 824 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 253 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +V+QR S + +L+ + F L +QP G + +E L HP Sbjct: 499 MNERVLQRQSLESSLRLALERQEFLLH------YQPKMNLETGHITGMEALIRWRHP--E 550 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + M V++E + + + + + +VN+ Sbjct: 551 LGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGL-NPVPVAVNVSAVEFRRK 609 Query: 115 RQQPKI---LRQIERLP-WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + LR+ + P +L EL E + + + ++ G L +DDFGTG + Sbjct: 610 HFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYS 669 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L+ + D +KI R + + + S ++ + VI EGVET E+ Sbjct: 670 SLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLAL 729 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ QG++ SRP + + + Sbjct: 730 LRSHCCAEGQGYYFSRPVSVPAVAELL 756 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 253 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 102/263 (38%), Gaps = 21/263 (7%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNPSQ 61 R +R+ A L+ F L +QP+ G ++ E L HP Sbjct: 559 RAAHERLGLEAALRRGLERGEFVLH------FQPVVALDKGEVVGAEALVRWNHPT--EG 610 Query: 62 RLPPDRYFTEITVSHRMEVVKEQI--DLLAQKADFF-IEHGLLASVNIDGPTLIALRQQP 118 + P R+ + + + E + Q ++ L +VN+ A Sbjct: 611 MIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGDLTA 670 Query: 119 KILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSA 169 + ++R + L E+ E + +T A++ G L +DDFGTG ++ + Sbjct: 671 TVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAY 730 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L D +KI R + R + + ++ + ++ GVI EGVET E+ +++ Sbjct: 731 LKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSL 790 Query: 230 PAFAAQGWFLSRPAPIETLNTAV 252 A QG+ + RP AV Sbjct: 791 GCEAYQGYLVGRPQAAADFLGAV 813 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 101/264 (38%), Gaps = 23/264 (8%) Query: 4 QVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQR 62 Q+++ I ++++ + + +QP + + R++ VE L HP Sbjct: 551 QLLENIEIERDLRKAIERKELVV------YYQPQFHSESNRMIGVEALVRWNHPTK--GM 602 Query: 63 LPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQ 117 L P + + + V++E + Q D + SVN+ Sbjct: 603 LSPGVFIPIAEETGLIYEIGTWVLREACRQMKQWHDKG-GPLIPVSVNLSSHQFHQRNLV 661 Query: 118 PKILRQIERLP----WLRFELVEHIRLPKDSTFASMCEFGPL----WLDDFGTGMANFSA 169 I +E +L E+ E + + + + + E + LDDFGTG ++ S Sbjct: 662 QYIKNILEETKLAPHFLELEITESMMMDPAVSISILHELNKIGTRISLDDFGTGYSSLSY 721 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L + +KI R L ++ + + + ++ + VI EG+ET ++ + + Sbjct: 722 LKKFPIHKLKIDRSFITDLSRNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTEN 781 Query: 230 PAFAAQGWFLSRPAPIETLNTAVL 253 QG++ SRP + + Sbjct: 782 HCKEIQGYYYSRPLSANEVEQSFF 805 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 104/262 (39%), Gaps = 24/262 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++ +R+ ++ ++ + + +QP G + + E L HP Sbjct: 629 MNNRMRERLYLEQSLRNAIGLHQL------SLWYQPKLDLASGSVKSAEALIRWRHP--Q 680 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++E LA+ D + ++NI L Sbjct: 681 LGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRD-QENQDIRVAINISAYQLSHG 739 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + ++++ ++ L L E+ E +P+ S+ E G + LDDFGTG + Sbjct: 740 KLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYS 799 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + E + +++L + V+ EGVET + Sbjct: 800 SLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEF 859 Query: 226 VQNSPAFAAQGWFLSRPAPIET 247 ++ + QG++ +P P E Sbjct: 860 LRTNGCDEVQGYYFCKPLPSEE 881 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 100/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++V R++ +L++ L +QP + G ++ +E L P Sbjct: 602 MNQKVNARLTIETGLRRALEKGEMLLH------YQPRLEPGTGAVVGMEALVRWNSP--D 653 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V+ + + L SVNI + Sbjct: 654 MGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHD-SLRVSVNISARQFVGH 712 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 +++R IE+ ++ EL E + E G + +DDFGTG + Sbjct: 713 DFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYS 772 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + + + E + + ++ + + V+ EGVET E+ + Sbjct: 773 SLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKL 832 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG++ SRP P E + Sbjct: 833 LMEGNCEEIQGFYFSRPLPPEEFERYI 859 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 114/271 (42%), Gaps = 24/271 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q ++R+ + ++L+++ F+L +QPI +L+ E L HP Sbjct: 419 MHTQALERLEVESSLRKALEKQEFYL------YYQPIISFKTSQLIGFEALLRWHHPT-- 470 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLA-QKADFFIEHGLLASVNIDGPTLIA 113 + P + + + V++E ++ ++ F L SVNI L Sbjct: 471 QGWISPATFIPIAEETGLIVSLGQWVLQEACHQISIWQSHFPFSEPLKVSVNISSFQLNQ 530 Query: 114 LRQQPKILRQIE----RLPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGM 164 + ++ + +E + L E+ E + + + + + G + +DDFGTG Sbjct: 531 MDFVEQVKKVLEESKIKASQLNLEITETVIMNNIESTSFKLQCLQKLGVKISIDDFGTGY 590 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + L ++ D +KI R L +P + ++ L N + EG+ET E++ Sbjct: 591 SSLNYLQQLPIDILKIDRSFVRRLESNPSEFQIIEAIIKLGNILGMETLAEGIETSEQYN 650 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 +Q+ AQG+ S+P + + +L Sbjct: 651 LIQSLGVDYAQGFIFSKPLNKSLVEQTLYSL 681 >UniRef50_Q89U68 Blr1551 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89U68_BRAJA Length = 566 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 18/261 (6%) Query: 5 VIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNPSQRL 63 + R + E++ + F L +QPIY R+ E L HP + Sbjct: 299 LQSRRALELDLREAMDKDEFTL------FYQPIYDLRMDRISGFEALLRWPHPKR--GLV 350 Query: 64 PPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQ 123 PPD++ + + E + A + L +VN+ + R I Sbjct: 351 PPDQFIPIAEDIGLITPLGEWVLNRACEQAAGWPSELKIAVNVSATQIRDPRFAEVIANA 410 Query: 124 IER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSALSEVR 174 ++ L E+ E + L + T + G + LDDFGTG ++ S L Sbjct: 411 LDASTLAPHRLELEITESVLLGNSAETVATLHKLKAQGLSIALDDFGTGYSSLSYLRSFP 470 Query: 175 YDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAA 234 +D +KI + + + + + L + EGVET E+ ++ A Sbjct: 471 FDKLKIDQSFVRDATATNGSKLIVRAITSLGRSLGITITAEGVETIEQLDQIRAEGCNEA 530 Query: 235 QGWFLSRPAPIETLNTAVLAL 255 QG+ SRP P + + +L L Sbjct: 531 QGFLFSRPVPATEIASTILNL 551 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ + ++ + F + +QP T R++ E L HP + Sbjct: 947 MNINALEHMQLQGQLRHAIINQEFRI------YYQPQIDTLNERMIGAEALVRWQHPQH- 999 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ S + V+ E ++ +VN+ Sbjct: 1000 -GLVPPLKFIPLAERSGLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRG 1058 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 +++ +ER L EL E I L T + + G L +DDFGTG + Sbjct: 1059 NIVETVIQALERSGLPAENLELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFGTGYS 1118 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI + + PE + S ++ L + VI EGVET + + Sbjct: 1119 SLSYLKRLAVDKLKIDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQL 1178 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ QG+ SRP P E + Sbjct: 1179 LKSLECNEVQGYLFSRPIPAEDFSGLF 1205 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 101/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + +R+ A ++L +F L +QP G+++ E L HP Sbjct: 1037 MQARSARRLLLENALRQALSRNQFELH------YQPQISMQDGKIVGAEALLRWYHP--E 1088 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V++ + + + D + ++N+ Sbjct: 1089 LGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPP-VTVAINLSAVQFRQA 1147 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 R +++ + W+ EL E + + + G + +DDFGTG + Sbjct: 1148 RLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYS 1207 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + + +KI + L E R + + ++ L + I EGVET + Sbjct: 1208 SLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAF 1267 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG++ SRP + VL Sbjct: 1268 LRLQGCNEVQGYYFSRPLTVALFEAFVLG 1296 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 92/262 (35%), Gaps = 18/262 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++I R ++L F + +QPIY R+ E L HP+ Sbjct: 696 MDARLIARRIMERDLRDALAREAFEV------YYQPIYSLETDRICGFEALLRWNHPVR- 748 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + E + A + L +VN+ + Sbjct: 749 -GFVSPAEFIPIAEELGLIVPLGEWVLRRACEEAARWPDELKVAVNVSAVQFTSASLVTA 807 Query: 120 ILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSAL 170 + + R L E+ E + + + S+ G + +DDFGTG ++ S L Sbjct: 808 VREALRRTGLPGRRLELEITETVLVANPGATTAILHSLRALGVRVAMDDFGTGYSSLSYL 867 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI + L + ++ L EGVET + ++ Sbjct: 868 RSFPFDKIKIDQSFVRDLCVKDGTDFIVRAVIGLGASLGMTTTAEGVETEAQLAHLRAEG 927 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG+ SRP P+ + + + Sbjct: 928 CDEVQGYLFSRPVPVSEVASVI 949 >UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXA0_LEPCP Length = 771 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 104/263 (39%), Gaps = 18/263 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M QV +R+ E++ +++ L +QP + E L HP + Sbjct: 484 MGEQVRRRLVLERDLREAIDKQQLSLH------YQPKVDLQTWEVTGFEALLRWRHPEHG 537 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + +PP + S + + E + A + + ++NI ++A Sbjct: 538 N--IPPSEFIPVAEDSGLILPIGEWVLTQACQQAARWPAPMQVAINISPVQVMAQNLPEA 595 Query: 120 ILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 + R ++ L E+ E + + + ++ + G + LDDFGTG ++ + L Sbjct: 596 VGRALKASGLAPRRLELEITESVFINETRGTVDRLHALRKVGVQIALDDFGTGYSSLAYL 655 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D +KI R + S + R + +L L + EGVE P + + N Sbjct: 656 RRFPFDTLKIDRAFVREVLLSRDARAIVRNILALAKSLRMSTVAEGVEEPAQASVLGNEG 715 Query: 231 AFAAQGWFLSRPAPIETLNTAVL 253 QG+ +SRP P + + +L Sbjct: 716 CDLVQGFLVSRPMPADEVTGFLL 738 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 93/267 (34%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M +R+ + L+ E +QP T G ++ E L HP Sbjct: 757 MNAAAAERLQLQGELRNA------HLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPT-- 808 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ S + ++E + L +VN+ G Sbjct: 809 LGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPP-LTVAVNLSGCQFQQS 867 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + + +L EL E I + +T + G L +DDFGTG + Sbjct: 868 NFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYS 927 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + + P + ++ L +I EGVET + Sbjct: 928 SLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDY 987 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG++ SRP P E + T + Sbjct: 988 LHAAGVDFIQGYYFSRPLPAEDMATYL 1014 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 95/268 (35%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R LQE +F L +QP GRL+ VE L HPL Sbjct: 774 MQAVISARAEMEADMRLGLQENQFLL------YYQPQVNHAGRLIGVEALVRWQHPLR-- 825 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ L L +VN+ Sbjct: 826 GLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIAVNVSALQFHGES 885 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 +L + R L+ EL E + + D A M LDDFGTG ++ Sbjct: 886 FVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVGFSLDDFGTGYSS 945 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D IKI + +P+ L + + VI EGVET + + Sbjct: 946 LSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGMMVIAEGVETQMQRDFL 1005 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+F RP P+ L ++A Sbjct: 1006 EGEGCLNFQGYFFGRPVPVAELACFLVA 1033 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 111/266 (41%), Gaps = 25/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNP 59 + + + +++ ++L E++F L +QP I+ G+++ +E L HP Sbjct: 549 LHQVLAKKLQLERELRKALDEKQFTLH------YQPKIHLQTGQIIGMEALIRWDHP--D 600 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ + + V++ + L +VNI + Sbjct: 601 LGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQ-LAVAVNISLRQFMQN 659 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKDSTFASMCEFG----PLWLDDFGTGMAN 166 I +E +L E+ E + L D T + + +DDFGTG ++ Sbjct: 660 NLIEMITSILEETGLAPQYLELEITESMALNVDYTIRILNRLKALGVSISIDDFGTGYSS 719 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S LS+ D +KI + L +P+ + + ++H+ + VI EGVET E + Sbjct: 720 LSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFL 777 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+F S+P P + +++ + Sbjct: 778 KEQLCNEVQGYFYSKPLPTKEIDSFL 803 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 100/265 (37%), Gaps = 24/265 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++V +R+ ++++ L +QP GR+ E L HP Sbjct: 828 MTQRVTRRLQTEAELRKAIESGDLRLH------YQPQIDAASGRVYGCEALVRWQHP--E 879 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 LPPDR+ S + V++E + D + L +VNI Sbjct: 880 RGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGLPP-LDVAVNISALQFRRR 938 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + R + + E+ E + ++F + G L LDDFGTG + Sbjct: 939 DFVATVARVLGETGADPARIELEITESALMDATPELVASFDQLVALGLTLALDDFGTGYS 998 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI R L +PE + S L L V+ EGVET ++ Sbjct: 999 SLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQRGY 1058 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNT 250 + A QG+ SRP +E T Sbjct: 1059 LCKRGCRAMQGYLFSRPLGVEEFGT 1083 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++R+ +L++ A +QP G + +E L HP + Sbjct: 1218 METAAVKRLGLEAELRRALEQNEL------ALYYQPQINLGTGEIATLETLIRWHHPEH- 1270 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + + +++E + +VN+ G L Sbjct: 1271 -GLIPPSEFIPLAEETGLIASIGAWILREACTQMQSWLQRGFGP-FHIAVNVSGRELERE 1328 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 KI+ ++ WL E+ E + + F + E G +DDFGTG + Sbjct: 1329 DLVDKIVTILKETGLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYS 1388 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + +P+ + ++ L + V+ EGVET + Sbjct: 1389 SLNYLKSFPVDILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEF 1448 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG++LS P + A+L+ Sbjct: 1449 LKAHQCDRFQGFYLSEPLSAAEIEQAILS 1477 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 100/268 (37%), Gaps = 25/268 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + R+ +L+E++F L +QP + +L+ VE L HP Sbjct: 362 MHHKSSTRLLLETELRVALEEKQFEL------YYQPQFSLPDCKLVGVEALIRWHHP--Q 413 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 L P + + + V++E + + L SVN+ G Sbjct: 414 RGLLCPSSFIPVAEETGLIVRIGEWVLREACRQAMEWKALGVP--LRMSVNLSGRQFRQE 471 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + + IER L E+ E + + A + G L +DDFGTG + Sbjct: 472 NLVQTMTKIIERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYS 531 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L +KI R + P+ + + + + + V+ EGVET + + Sbjct: 532 SMAYLKRFPVSRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQF 591 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ + QG+ SRP + V+ Sbjct: 592 LREQGSDMVQGYLFSRPVSAREMAELVI 619 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 97/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q ++R++ L+ F + +QP+ R + VE L HP Sbjct: 486 MYAQAVERLALERDLRHGLERGEFQI------YYQPVLDVRTRRPVEVEALVRWHHP--E 537 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLL-ASVNIDGPTLIA 113 + P + + + V+ E LA F + SVN+ Sbjct: 538 RGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFRH 597 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGM 164 I + + L+ E+ E + + + + G L +DDFGTG Sbjct: 598 PSLTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTGY 657 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L D +KI R L QS E + L ++ N V VEGVET E+ Sbjct: 658 SSLSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQLE 717 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ + P P + + + Sbjct: 718 FLERVGCDLVQGFLFAPPMPPDEVARFL 745 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 98/264 (37%), Gaps = 25/264 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR--LMAVELLTVVTHPLN 58 M + R+ A ++++ R L +QP +Q ++ E L + Sbjct: 493 MNADALARLQMEMALRQAVENRELLL------YYQPQWQLADSPSVIGAEALIRWRN--K 544 Query: 59 PSQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA 113 + + PD++ S + V+ E L D + L +VN+ A Sbjct: 545 EGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQG-KKQLRVAVNVSARQFRA 603 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDSTFASMCEFGP-----LWLDDFGTGM 164 + + + + EL E I + K A + + LDDFGTG Sbjct: 604 GNLAEVVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVGIALDDFGTGY 663 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + LS +KI R L E + ++ L +R V+ EGVET E+ Sbjct: 664 SSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRA 723 Query: 225 DVQNSPAFAAQGWFLSRPAPIETL 248 +Q+ AQG+ S P P E Sbjct: 724 YLQSRGCDLAQGFLFSPPLPAEQF 747 >UniRef50_B3E3S5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=cellular organisms RepID=B3E3S5_GEOLS Length = 1036 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 112/267 (41%), Gaps = 22/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + V +++ + + L+ F+ +QP++ G+ L+ +E L HP Sbjct: 402 MNQAVREQMQIESSILRGLRAGEFFA------CYQPLFSQDGKKLVGMEALARWQHPT-- 453 Query: 60 SQRLPPDRYFTEITVSHRM-EVVKEQIDLLAQKADFFIEHG---LLASVNIDGPTLIALR 115 + PD++ + + ++ ++L Q + E G L +VN+ L + Sbjct: 454 LGLVGPDKFIPVAEANGAIVQLGDRMLELALQNCKQWREQGYPHLTVAVNVSTRQLKDRQ 513 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLP----KDSTFASMCEFG-PLWLDDFGTGMAN 166 ++ RQ++ + L EL E + + + E G L +DDFGTG ++ Sbjct: 514 FAERVARQLQMVGLPPDALCCELTESLLMEHSNENTEQIFRLKELGVKLAIDDFGTGYSS 573 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D IKI R L +P+ R + ++ + V EGVETP + + + Sbjct: 574 LTYLKHLPVDRIKIDRSFVNELDSNPDDRAIVVAIIAMARSLHLKVTAEGVETPSQHQLL 633 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 Q QG++ +P E +L Sbjct: 634 QELGCDTMQGYYFGKPMQREAFELFLL 660 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 102/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + +R+ E E+L F L +QP GR+ A E L HP+ Sbjct: 510 MAARAHERLQWQEELREALAGEEFLLH------FQPQMNLGTGRIFAAEALLRWNHPVR- 562 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + ++ L D + L+ SVN+ Sbjct: 563 -GIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPP-LIISVNVSARQFRER 620 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 ++ ++ +L EL E + + +T ++ G L +DDFGTG + Sbjct: 621 NWASRVAEILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYS 680 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + SAL +KI R + + + S ++ L + VI EGVE+ + Sbjct: 681 SLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEF 740 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +Q + QG+F SRP E + + + Sbjct: 741 LQKAGCDEIQGYFFSRPLSAEAFESLLSS 769 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 102/269 (37%), Gaps = 22/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R A +L+ + F L +Q + GR + E L + Sbjct: 782 MQEILEKRGQLETALRGALERKEFLLH------YQLQMDSSGRPIGAEALLRWNN--AKL 833 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ S + V++ LA+ + L +VN+ Sbjct: 834 GSVSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAA 893 Query: 116 QQPKILRQIERL---PWL-RFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 K+ +++ PWL + EL E + L + ++ G +DDFGTG ++ Sbjct: 894 FVAKVRNVLQQSGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSS 953 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S LS + D +KI + + + ++ + VI EGVET E+ + Sbjct: 954 LSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFL 1013 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 A QG+ ++P PIE L + L Sbjct: 1014 DLRGCQAYQGYLYAKPMPIEELEIKLAQL 1042 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 101/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q ++ + + +L+ F + +QP GRL+ +E L HP Sbjct: 647 MNVQALEHLILENSLRRALERNEFVI------FYQPQMDLKSGRLVGMEALIRWQHP--D 698 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQ-IDLLAQKADFFIEHG---LLASVNIDGPTLIALR 115 LPP R+ + + + E + K +++ G L +VN+ G + Sbjct: 699 LGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKK 758 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 I +++ L EL E + + K + E G L +DDFGTG ++ Sbjct: 759 FIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSS 818 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI R + +P+ + S ++ + + V EGVE + + Sbjct: 819 LSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFL 878 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ LS P P + Sbjct: 879 STRNCNEIQGYLLSSPLPEAEFTRFL 904 >UniRef50_A0YP68 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=2 Tax=Oscillatoriales RepID=A0YP68_9CYAN Length = 575 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 102/260 (39%), Gaps = 22/260 (8%) Query: 9 ISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVV----THPLNPSQRL 63 I+ ++L+ +F L +QP G+++ E L ++P+ + Sbjct: 318 IALENDLRQALEHNQFQL------YYQPKVDLKTGQIIGAEALIRWIESKRGFVSPAVFI 371 Query: 64 PPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQ 123 P I V++ +E L +VN+ G P +L Sbjct: 372 PLAEEIGLIEPIGEW-VLRTACRQTKTWHKLGLET-LKMAVNLSGCQFNLPDICPMVLET 429 Query: 124 I--ERLP--WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMANFSALSEVR 174 + E LP L EL E + + + G + +DDFGTG ++ S L + Sbjct: 430 LLAEDLPSSCLELELTESFLVEHEDASIQKLNRLKALGLKIAIDDFGTGYSSLSYLQQFP 489 Query: 175 YDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAA 234 +D +K+ R + Q+P+ + + ++ + ++ V+ EGVET E ++ Sbjct: 490 FDVLKLDRCFVQNIDQNPKNKIIVEAVIKMAHQLNLEVVAEGVETTAELHVLRQYQCDII 549 Query: 235 QGWFLSRPAPIETLNTAVLA 254 QG+ SRP P + V + Sbjct: 550 QGYLFSRPIPAQEFQALVES 569 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 91/240 (37%), Gaps = 18/240 (7%) Query: 28 CERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRM-----EVV 81 E +QP G+++ +E L P +PP ++ S + V+ Sbjct: 790 NEFLLHYQPQVDIETGQVVGMEALVRWHDP--EVGLIPPSQFIPVAEESGLIGPLSEWVL 847 Query: 82 KEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERL----PWLRFELVEH 137 +E D + SVN+ +++ +E +L EL E Sbjct: 848 REACRQNKAWQDEGLPPA-RVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTES 906 Query: 138 IRLPKD----STFASMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSP 192 + S + G L +DDFGTG ++ S L D +KI R + +S Sbjct: 907 TIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESS 966 Query: 193 EGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 + T+ S ++ L + VI EGVET + ++ QG+F ++P P + + Sbjct: 967 DDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGML 1026 >UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KCF3_PSEFS Length = 857 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 18/262 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++I+R +++ E +QP Y+ G+++ E L HP+ Sbjct: 596 MNARIIERRRLESDLRYAIK------HAELRLHFQPRYRIADGQMVGAEALVRWQHPVR- 648 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + PD + S + + + + A L SVN+ + Sbjct: 649 -GLIAPDTFIPIAEESGLILALSDWVLETACVCAAQWPEPLFVSVNLSPTEFKRGNLVER 707 Query: 120 ILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 + ++ + E+ E + L ++ + G + +DDFGTG ++ S L Sbjct: 708 TQQALKSSGIDPARVELEITESVMLEDATGALEVMRTLKQLGVRIAMDDFGTGYSSLSYL 767 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 + +D +KI R L +S + + + ++ L V EG+ET E ++ Sbjct: 768 RDFPFDGLKIDRSFLTRLEESDDDKAIIQAIVGLGRTLALTVTAEGIETAEHLALLKAVA 827 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG+FLSRP IE LN+ + Sbjct: 828 CEEGQGYFLSRPLDIEALNSLL 849 >UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DIH6_THEEB Length = 1292 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 20/267 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M QV++R+ ++L Q +QP+ RL+ +E L HP Sbjct: 1029 MYEQVLERLHLEHDLRQALN------QGGLQLLYQPVVHLQSQRLVGMEALVRWQHPERG 1082 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++P+ +P I + + + L + + L+ SVN+ TL Sbjct: 1083 LVSPAHFIPIAEDTGLIVALDQWALAQACWQLWTWRQQYSTAANLVLSVNVSAKTLQDPT 1142 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDSTFASMCE-----FGPLWLDDFGTGMAN 166 + +R P L EL E I + S S+ E + +DDFGTG + Sbjct: 1143 FLQHLDTIRQRYPLPKGQLLLELTERIGIELGSEMLSLLESLRHRHVEISIDDFGTGYSC 1202 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + ++K+ R L ++ + +L L + VI EG+ETP++ + + Sbjct: 1203 LSYLHSLPIQHLKVDRSFVSQLEENERNLQIIRMILLLSKQLGYRVIAEGIETPKQLQIL 1262 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 Q QG+ +RP P ET + L Sbjct: 1263 QELGCDEGQGYLFARPLPPETFASLFL 1289 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 89/265 (33%), Gaps = 24/265 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + + ++++ + A +QP G + VE L HP Sbjct: 493 MNATAVNYLLLENDLRRAIEQNQL------ALYYQPQIDLKTGDMTGVEALVRWQHP--E 544 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++E D G +VN+ Sbjct: 545 RGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVG-KVAVNLSPRQFRQK 603 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFGP-LWLDDFGTGMA 165 K+ ++ +L E+ E + + + + G L +DDFGTG + Sbjct: 604 NFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYS 663 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L +KI R + + ++ L + V+ EGVET + Sbjct: 664 SLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEW 723 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNT 250 ++ QG+ ++P + L + Sbjct: 724 LRAKGCDQVQGFLYAKPMTAKQLES 748 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 99/245 (40%), Gaps = 20/245 (8%) Query: 9 ISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDR 67 + + ++L +++F L +QP GR++ +E L HP + PDR Sbjct: 312 LELETSLRQALGQKQFRL------YYQPQIDIVSGRVLGLEALLRWHHPT--QGMIAPDR 363 Query: 68 YFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERL 127 + + + + E + L + +HGL +VN+ I R ++ Sbjct: 364 FIPLAEKTGLIIPIGEWV-LREACSQVATQHGLKVAVNLSARQFHQKDLVAMIRRILDET 422 Query: 128 PW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYI 178 L E+ E + +T + + G + LDDFGTG ++ S L D + Sbjct: 423 GMPPVNLELEITESALIYDVELAIATMEQLNDLGVSVSLDDFGTGYSSLSYLKRFPIDML 482 Query: 179 KIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWF 238 KI + + P+ + ++ + + VI EGVET + ++ AQG+ Sbjct: 483 KIDKSFIDEVTTDPDSNVIVKTIIVMAHSLGLKVIAEGVETK-QLTMLREHGCDQAQGYL 541 Query: 239 LSRPA 243 ++RP Sbjct: 542 IARPL 546 >UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensors n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE1_9CYAN Length = 1090 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 29/273 (10%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M RQ ++R+ +L+ F + +QPI T G ++ E L +P Sbjct: 817 MHRQAVERLQLESQLRRALELNEFQV------YYQPIVSITTGEVIGFEALIRWLNPYKG 870 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++P+ +P I+ + + + L + F + L SVN+ L Sbjct: 871 FISPALFIPVAEEIGLISKIGQWVLYQACEQLQVWRKQFPLFKNLTVSVNLSSQQL---- 926 Query: 116 QQPKILRQIERL--------PWLRFELVEHIRLPK-DSTFASMCEF----GPLWLDDFGT 162 ++P +L QI+++ L+ E+ E + + D + + L LDDFGT Sbjct: 927 REPDLLEQIDQVLATTGLPSHCLKLEITESLLIENYDQALKILRQIQDRNIQLSLDDFGT 986 Query: 163 GMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEE 222 G ++ S L + +KI R L+Q+ E + +L L N I EG+ET + Sbjct: 987 GYSSLSYLHRFPINTLKIDRSFVKRLKQNHENTAIIKAILRLANALAMNTIAEGIETVFQ 1046 Query: 223 WRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 ++ QG S+ + + T +L+L Sbjct: 1047 LEKLKGLGCEYGQGHLFSKALDAQDI-THLLSL 1078 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 93/267 (34%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + R+ +L+ F+L+ +QPI GRL+ E L + P Sbjct: 466 MNLKAHARMEMETNLRHALEREEFFLE------FQPIVNARDGRLVGAEALLRWSDP--E 517 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD + S + V++ + + + SVN+ G Sbjct: 518 KGLIMPDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPP-FRISVNVSGRQFCQA 576 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPK----DSTFASMCEF-GPLWLDDFGTGMA 165 + I +L E+ E + + E + +DDFG G + Sbjct: 577 NFTDTVCSIIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYS 636 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L + D IKI R L + + ++ + R V+ EGVET E+ Sbjct: 637 SLGYLQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDF 696 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG++ RP E T + Sbjct: 697 LKEQGCHEIQGFYFHRPLSEELFKTLL 723 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q +++ A +L+ + +QP R++ VE L HP+ Sbjct: 836 MNAQNTEQLMLESALRHALERGELEMH------YQPKMDLQTQRIVGVEALMRWHHPI-- 887 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ + ++ + + +L SVN+ + Sbjct: 888 LGMIPPVQFIPIAEELGLIVSLGKWALERACADSRSWQKYGLPK-VLMSVNLSPRQFESR 946 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDSTFASMCEFGP-----LWLDDFGTGMA 165 I +E L E+ E + A + L +DDFGTG + Sbjct: 947 TLIADIQAVLEASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYS 1006 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI R L Q + R L ++ L + V+ EG+ET + Sbjct: 1007 SLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQLDY 1066 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ AQG++L +P P + + + Sbjct: 1067 LRSHGCDEAQGYWLCKPVPADEVRNFM 1093 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 + R V +R+ ++L+ F L +QP T G + +VE L HPL Sbjct: 448 INRGVRERLDIENGLRDALKHGGFKLH------YQPQIDLTTGSICSVEALLRWRHPL-- 499 Query: 60 SQRLPPDRYFTEITVS-----HRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PDR+ + + V+ L + I G+ +VN+ L Sbjct: 500 LGVIAPDRFIPIAEETKLILPLGLWVIDRACHQLRAWRNDGI-AGVRMAVNVSVKQLQDE 558 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + +ER + E+ E + + S+ ++G L +DDFGTG + Sbjct: 559 SFFEALGSIVERHGLSGSDIELEITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYS 618 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L + +KI R + + ++ L + +I EGVET + Sbjct: 619 SLGRLKLLPIQSLKIDRSFVHDIETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNL 678 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +QNS A QG+ +++P P + + + Sbjct: 679 LQNSGCDAIQGFLIAKPLPADDVAKLI 705 >UniRef50_Q21XF0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21XF0_RHOFD Length = 879 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 24/270 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M +++ ++L + F L +QP G++ + E L P Sbjct: 615 MTDMAAGKLTLENQLRQALDKGEFVLH------YQPKVNLASGKMTSAEALIRWNDPRT- 667 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP R+ + + + +++ I + + + +VN+ L Sbjct: 668 -GLVPPGRFIPILEETGLIHEVGRWALRQAIKDALRWRSAGL-AAVRIAVNVSPLQLRHR 725 Query: 115 RQQPKILRQI----ERLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 +I + I L E+ E + + ++ ++ + G L +DDFGTG + Sbjct: 726 GFIDEIRQAISIDAHAAAGLELEITESLLMENVQHSITSLHAIRDMGVTLAIDDFGTGFS 785 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S LS++ D +KI R + + +PE L S ++ L + V+ EGVET E+ R Sbjct: 786 SLSYLSKLPVDTLKIDRSFVIEMTDAPESLALVSTIISLAHALKLKVVAEGVETEEQSRL 845 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 +Q QG+ S+P P + LAL Sbjct: 846 LQVLNCDEIQGFLFSKPVPSDIFEAKYLAL 875 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 90/266 (33%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V + L+E +F + +QP R+ VE L HP Sbjct: 727 MQASVSANAALSTDLRAGLREHQFLVH------YQPQVDREQRITGVEALLRWKHP--QR 778 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+++ LA GL +VN+ Sbjct: 779 GMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPD 838 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 ++ I+ L+ EL E + + ++ G L LDDFG G ++ Sbjct: 839 FVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSS 898 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P + S ++ L VI EGVET + + Sbjct: 899 LSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFL 958 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ P PI + Sbjct: 959 AGLGCGYYQGFLFCPPLPIAEFEAFM 984 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q + +++ F L +QP Y +++ +E L HP Sbjct: 1069 MHEQAHDILLLESELRSAIEHEEFLL------YYQPQYDSKTSKIIGLEALIRWQHP--E 1120 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V++ + LA + + + +VN+ Sbjct: 1121 KGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLG-AVPVAVNLSVVQFHQD 1179 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + + + L EL E I + + + G L +DDFGTG + Sbjct: 1180 TLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYS 1239 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + D +KI + + P+ + + ++ + I EGVET E+ Sbjct: 1240 SLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNF 1299 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG++ S+P P + + Sbjct: 1300 LIANSCDEIQGYYFSKPLPSTEVTKLL 1326 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 98/262 (37%), Gaps = 24/262 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R +RI +L ++ L +QP G ++ +E L P Sbjct: 433 MNRMAWERIEIETGLRRALDLQQLALH------YQPQVDLKTGHIIGMEALLRWESP--E 484 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 R+ P R+ + + V++ L +VNI Sbjct: 485 LGRVSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFP-SLRMAVNISARQFKQA 543 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPK-DSTFASM----CEFGPLWLDDFGTGMA 165 ++ I+R L EL E + + K D T ++ L +DDFGTG + Sbjct: 544 GFIDRLDAIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYS 603 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 S L D IK+ R + ++ + + ++ + + VI EG+ET E+ Sbjct: 604 MLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAF 663 Query: 226 VQNSPAFAAQGWFLSRPAPIET 247 +++ QG++ RP P+ET Sbjct: 664 LKDRACEEGQGYYFGRPVPVET 685 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 95/267 (35%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + + + ++LQ F L +QP + G++ E L HP Sbjct: 499 MDTRAHKALELEGDLRQALQLGSFVLH------YQPKVKIASGKIDGCEALVRWNHP--D 550 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD + + + V++E + + +VN+ + Sbjct: 551 KGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPP-IKIAVNLSARQFLQS 609 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDSTFASMCE-----FGPLWLDDFGTGMA 165 I + WL EL E + + A + L LDDFGTG + Sbjct: 610 DFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYS 669 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + + ++ + ++ + + I EGVET E++ Sbjct: 670 SLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAF 729 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+ S+P P L + Sbjct: 730 LAMCECDSIQGYLFSKPLPANDLAALL 756 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 98/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + +++ E++F L +Q GR E L HP + Sbjct: 559 MQAAVTHRAALETELRKAIDEQQFHL------CFQVQMDQSGRPTGGEALLRWEHPTRGT 612 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V+ LA + GL +VN+ R Sbjct: 613 --IPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVNVSARQFRQAR 670 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDSTF----ASMCEFG-PLWLDDFGTGMAN 166 ++ + + L+ EL E + L A + + G LDDFGTG ++ Sbjct: 671 FTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSS 730 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + + +KI + + P + ++ L N VI EGVET +WR + Sbjct: 731 LAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFL 790 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 N QG+ RP P+ + Sbjct: 791 ANVGCKNYQGYLFGRPLPLLEFEQFL 816 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 24/263 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M +R++ A ++L F L +QP + C R L+ +E L HP Sbjct: 698 MSAVATERLALENALHQALSNGEFRL------YYQPQIEVCSRRLIGLEALIRWRHP--E 749 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP R+ + + V++E + + + +VN+ L Sbjct: 750 VGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGL-CIVPVAVNLSPLQLQKD 808 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 ++ + L EL E + + E G +DDFGTG + Sbjct: 809 DFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYS 868 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L+ D +KI + + + + + ++ L + V+ EGVET E+ Sbjct: 869 SLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEF 928 Query: 226 VQNSPAFAAQGWFLSRPAPIETL 248 ++ + AQG++ SRP P + + Sbjct: 929 LERAGCDGAQGFYFSRPVPADEI 951 >UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax=Enterobacteriaceae RepID=C9XYY6_CROTZ Length = 827 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 18/262 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M Q++QR + E++++R+F L +QP Y +++AVE L HP Sbjct: 564 MAEQIVQRREMENSLREAIRDRQFQL------VYQPRYDMNAEKIVAVEALLRWHHPT-- 615 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 L PD++ + + + + + A + GL SVNI + Sbjct: 616 LGLLMPDQFIPLAEETGLIIAISDWVLNAACRDAQRDMPGLAISVNISAVEFRTPGLVER 675 Query: 120 ILRQIERL----PWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMANFSAL 170 + + L E+ E+ L + G L +DDFGTG ++ S L Sbjct: 676 VQEALNATGLAPERLELEVTENATLSNPEQSLELMNGLKALGVRLLIDDFGTGYSSLSYL 735 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IK+ + + S ++ ++ L + + EGVET E+ ++ Sbjct: 736 RTFPFDGIKLDKSFVAGMPHSDNANSIVENIIGLGKAFSLSITAEGVETQEQLAQLKMYQ 795 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG+ + RP P+E L + Sbjct: 796 CDETQGYLMCRPLPLERLKAQL 817 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 102/270 (37%), Gaps = 24/270 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q R+ ++L ++F L +QP T +++ E L H Sbjct: 626 MTEQAYNRLLMENNLRDALDNQQFEL------YYQPQVDITTNKIVGFEALVRWNH--EQ 677 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQI-----DLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PPD + + + + +QI +++ + + ++N+ L Sbjct: 678 KGIIPPDHFIPLAEETGLIIPLGKQIIAMASQTISEWHQANLTNA-RIAINVSAKQLRDS 736 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 R + + + W+ E+ E + + + G + +DDFGTG + Sbjct: 737 RFFHNLNTALNKNNCQPDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYS 796 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L ++ +KI R L Q + + ++ + +I EG+ET E+ Sbjct: 797 SLAYLKKLPITKVKIDRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQNF 856 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 V QG++ SRP + + + +L Sbjct: 857 VLQEGCKLIQGYYYSRPLTKKAMTAKLESL 886 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 104/270 (38%), Gaps = 24/270 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + ++R+ E+++ + +QP R E+L P Sbjct: 452 MHAEALKRLELDRWLREAIERNEL------SLAFQPKVNLKTRDYTGAEVLLRWYRP--E 503 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA- 113 + P + + + VV+ L++ + H + ++N+ L Sbjct: 504 QGFISPAEFIPLAEETGLIKELGMWVVRRACQQLSEWRGTPLSH-IRLAINLSAIQLEDK 562 Query: 114 --LRQQPKILRQIERLP-WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + + +LR+ + P L FEL E + + + + + G L +DDFG G + Sbjct: 563 ELVHKIDNLLREFDVPPRQLEFELTEEVFIQNIESNMAHLNELIKMGFRLSIDDFGVGYS 622 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L IKI R L + + R + + ++ + + V+ EGVET + Sbjct: 623 SLAYLKHFPISCIKIDRSFVSQLETNADDRVIINAVIAMAHNLNLSVVAEGVETEAQAAY 682 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 +Q AQG+ ++P P + L +L Sbjct: 683 LQKQGCDEAQGYLFAKPLPPDQLYKLATSL 712 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 22/262 (8%) Query: 7 QRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP----LNPSQ 61 Q + +L+ + L +QP + L+ VE L HP ++P + Sbjct: 698 QSLRMEADLKHALENNQLHLH------YQPQFDLKNAGLVGVEALIRWNHPTEGPVSPGE 751 Query: 62 RLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKIL 121 +P I R V++E + F + +VN+ L + Sbjct: 752 FIPLAEETGLIHPLGRW-VLREACRQAKFWQNNFARI-VPVAVNVSSLQLKKNNFVHVLE 809 Query: 122 RQIERLP----WLRFELVEHIRLPKDSTFASMCEFGP-----LWLDDFGTGMANFSALSE 172 + + E+ E + + + L +DDFGTG ++ S L + Sbjct: 810 ECLNEFQIDPQLIELEITESAVMDRLEKSMELLNAIKGLGFNLAIDDFGTGYSSLSYLKK 869 Query: 173 VRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAF 232 + +KI R + L + + ++ + I EGVET E+ + + Sbjct: 870 FPFSKLKIDRSFVMDLETDENDAAIITAIISMATSLGLKTIAEGVETVEQKHFLTDHGCD 929 Query: 233 AAQGWFLSRPAPIETLNTAVLA 254 QG+ LSRP + + L+ Sbjct: 930 EVQGFLLSRPLSADAIEEMYLS 951 >UniRef50_C6X932 Diguanylate phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X932_METSD Length = 473 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 101/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R S +L + +F L +QP G + E L HP+ Sbjct: 197 MQTDISTRHSLYADMRAALAQGQFRLH------YQPQVDAVGNIFGAEALLRWQHPVR-- 248 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V+KE L + + L SVN+ L Sbjct: 249 GMIPPGVFIAAAEETGLIQPIGTWVLKEACAQLVKWSKDPNMAHLSISVNVSASQLRQPD 308 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFGPLW-LDDFGTGMAN 166 +++ + R L+ EL E + T ++ FG W LDDFGTG ++ Sbjct: 309 FVQEVIEIVMRSGATPAQLKLELTESMLAKDVDTTIQKMKALRAFGISWSLDDFGTGYSS 368 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + ++ +KI + L + + + L+ L +I EGVET E+ + Sbjct: 369 LNYLKHLPFEQLKIDQSFVRDLLTNESDKAIVETLVVLSKNLNMMLIAEGVETTEQLNYL 428 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 N QG+ SRP IE + Sbjct: 429 LNKGCMKYQGYLFSRPLSIEAFEAFM 454 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 24/262 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++++ I+ +L L +QPI GR+ E L HP Sbjct: 551 MHQEILDAINLEADLRAALDRGELLLH------YQPIVDVQTGRIEGFEALVRWDHP--D 602 Query: 60 SQRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 +PP ++ + ++ V+ E L + L SVN+ + Sbjct: 603 RGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVNVSCHQFVK 662 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGM 164 + +E L+ E+ E + + + + G + +DDFGTG Sbjct: 663 EGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHTAGELSRLKALGVKIAIDDFGTGY 722 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L ++ D++KI R + E + + ++ L VI EGVE ++ Sbjct: 723 SSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSIIALARSLGLTVIAEGVEHQDQLD 782 Query: 225 DVQNSPAFAAQGWFLSRPAPIE 246 ++N+ AQG+ SRP + Sbjct: 783 KLRNADCDKAQGFMFSRPVDKD 804 >UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=A7HQX0_PARL1 Length = 991 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M + ++ +++ R L +QPI T G + E L HP Sbjct: 726 MRSETDDHLTLETDLRHAIERREMEL------YYQPIMSLTDGGVRGFEALIRWNHPKEG 779 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L P +P IT R + +L + F +E L SVN+ L+ Sbjct: 780 LLAPDNFVPLAEELGVITEIGRFALRAASEELATWQKLFPMERALTVSVNVSSRQLLRHD 839 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFGP-LWLDDFGTGMAN 166 + R + R+ L+ E+ E + + S + G L LDDFGTG ++ Sbjct: 840 LIDDVKRVLNRIDIERGTLKLEVTESLVMENPEFAASMLTRIKALGAGLSLDDFGTGYSS 899 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L +D +K+ R + E + ++ L + V+ EG E+ + RD+ Sbjct: 900 LSYLQRFPFDTLKVDRSFVAGMSVDRETPLIIRSMVTLAHDLGMEVVAEGTESESQARDL 959 Query: 227 QNSPAFAAQGWFLSRPAPIET 247 + QG++ +P Sbjct: 960 ADMGCDYGQGYYFGQPMRAAE 980 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 96/267 (35%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + +R++ +L+ +QP + GRL+ E L P Sbjct: 627 MTQAARERLALEARLRRALE------LGHMRLYYQPQIELATGRLVGAEALLRWLDP--E 678 Query: 60 SQRLPPDRYFTEITVSH-----RMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ S + V+ E Q + L +VN+ + Sbjct: 679 EGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQQWRAAGLP-DLAIAVNVSLHQFLLT 737 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + + L E+ E K + E G L +DDFGTG + Sbjct: 738 DIAGATAEALNKSGFPASLLELEITESALAEKPEEALAVLNRLRELGLRLAIDDFGTGYS 797 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + + S + T+ S ++ L + V+ EGVET E+ Sbjct: 798 SLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSVIALGHAMGLKVLAEGVETQEQLSF 857 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q QG+F SRP P E + Sbjct: 858 LQQKGCDYFQGYFCSRPLPAEDFTRLL 884 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 102/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +V +R+S + +++ + F L +QP GR+ VE L HP Sbjct: 626 MNIRVFERLSLETSLHRAVKNQEFLLH------YQPRVDLRNGRICGVEALVRWNHP--E 677 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA- 113 + P ++ + + V++ D + L +VN+ Sbjct: 678 MGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPP-LRMAVNLSARQFRQE 736 Query: 114 --LRQQPKILRQIERLP-WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + +IL + P WL EL E + + + + + G + +DDFGTG + Sbjct: 737 NLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYS 796 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI + + + P+ TL ++ + + I EGVE E+ Sbjct: 797 SLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDF 856 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG++ SRP E L + Sbjct: 857 LCRHQCEEMQGYYFSRPITAEELGRLL 883 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 105/268 (39%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNP 59 M ++ R+ ++ Q + + +QP I+ GR+ VE L P Sbjct: 791 MNQRAQARLMVENHLRSAV------AQGQLSLHYQPRIHVADGRVAGVEGLLRWHSP--E 842 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PPDR+ + + V++ + + ++ + S+N+ L Sbjct: 843 LGHVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQE-VAVSINLSALQLRDP 901 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + +ER L EL E I + + T ++ E G L +DDFGTG + Sbjct: 902 GLLDVLRASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYS 961 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L+ D +KI R + P + ++ L + V+ EGVE E + Sbjct: 962 SLNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQA 1021 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ + QG+ +RP +T +L Sbjct: 1022 LRAAGCDELQGYHFARPMAADTATAWLL 1049 >UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6D2_PELCD Length = 976 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 22/260 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNPSQ 61 ++V R++ ++LQE + L +QPI+Q + ++ +E L HP Sbjct: 699 QRVQNRLTMETELRQALQEDQLELH------YQPIWQLTEKCIVGLEALVRWRHP--QKG 750 Query: 62 RLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEH----GLLASVNIDGPTLIALRQQ 117 LPPDR+ S+ ++ + + + A + + L SVNI L Sbjct: 751 LLPPDRFIPIAEESNLIQALGQWVLNAACRDMRSWRNQGFESLPVSVNISARQLFHDDFT 810 Query: 118 PKILRQIERL----PWLRFELVEHIRLPKDSTFAS----MCEFGP-LWLDDFGTGMANFS 168 + R ++ L E+ E I L KD+T + G L LDDFGTG ++ S Sbjct: 811 SSLARLLKEYALPPEQLELEVTETIFLQKDTTVEKVMNHLKNIGVGLVLDDFGTGYSSLS 870 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 L+ D +KI R + Q + L + ++ + V+ EGVET + + Sbjct: 871 YLNRFHIDKLKIDRSFMAHICQKEQDAILTATIIRMAQSLGMQVVAEGVETAGQELFLME 930 Query: 229 SPAFAAQGWFLSRPAPIETL 248 AQG+F +P PIE+L Sbjct: 931 QGCDLAQGYFYYKPQPIESL 950 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + + A +L F L +QP G ++ E L HP Sbjct: 775 MQTHSARTLQLVNALRHALPRHEFELH------FQPQVALQDGHIVGAEALLRWRHP--E 826 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S ++ V++ + L Q D + ++ +VN+ Sbjct: 827 LGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRP-MVIAVNLSAVQFRHP 885 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + R ++ +L EL E + + + E G + +DDFGTG + Sbjct: 886 NLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYS 945 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + + +KI + + P+ + + + +++L + I EGVET + Sbjct: 946 SLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAF 1005 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+++S+P P + V Sbjct: 1006 LRLQGCDEVQGYYVSKPLPKDQFEAFV 1032 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 99/264 (37%), Gaps = 24/264 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M Q Q + +L+ F + +QPI R L+ E L HP Sbjct: 1147 MHTQATQLLELETNLRLALEREEFIV------YYQPIVSLMNRNLLGFEALVRWIHP--E 1198 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFI-EHGLLASVNIDGPTLIA 113 + P + + + V++E + + FI L SVN+ G L Sbjct: 1199 KGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNLSGKQLQQ 1258 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKDSTFASM-----CEFGPLWLDDFGTGM 164 +I + L+ E+ E + + + + + + +DDFGTG Sbjct: 1259 PNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSIDDFGTGY 1318 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + D +KI R + Q E + ++ L + V+ EGVET + R Sbjct: 1319 SSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGVETEQHLR 1378 Query: 225 DVQNSPAFAAQGWFLSRPAPIETL 248 +Q QG+F S+P E + Sbjct: 1379 QLQQLGCEFGQGYFFSKPLESEKI 1402 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 23/262 (8%) Query: 7 QRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPP 65 +R++ ++Q + F L +QP Y G ++ VE L HP +PP Sbjct: 377 ERLTLQHEMYRAIQRKEFIL------LYQPQYDLVSGMMVGVEALVRWRHPAK--GMIPP 428 Query: 66 DRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI 120 + S + V++E D + + SVN+ + K+ Sbjct: 429 GEFIPIAEESGMIVQIGDWVLEEACRQNKAWQDAGLPP-MPVSVNLSIRQFVQQDLASKV 487 Query: 121 LRQIERL----PWLRFELVEHIRLPKDST---FASMCEFGP-LWLDDFGTGMANFSALSE 172 +E+ +L E+ E + + + + G + +DDFGTG ++F L Sbjct: 488 ASVLEKTGLKPEYLDLEITESMTMDTGHVSRCLLELTDMGVGISVDDFGTGYSSFHYLKN 547 Query: 173 VRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAF 232 D +KI R ++Q P + + ++ + + VI EGVE E+ ++ Sbjct: 548 FPIDRLKIDRSFVRDIQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRKHNCD 607 Query: 233 AAQGWFLSRPAPIETLNTAVLA 254 QG+F S P + + A Sbjct: 608 EMQGYFWSPPVSSTDIEQMLGA 629 >UniRef50_C3KBD8 Putative sensory box GGDEF/EAL domain protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KBD8_PSEFS Length = 409 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 22/261 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M + R A ++++ F L +QP + GRL A+E L P Sbjct: 145 MNVHDLARQDLENALRQAVEHHEFTLH------YQPKVEVASGRLCALEALLRWERPDYG 198 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++P+ +P I R V+++ +A+ I + SVN+ G LI Sbjct: 199 AVSPAVFVPILESLGLIVPVGRW-VIEQVCRQIAEWQQGPIGP-VEVSVNVSGHQLIEGD 256 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 I R +++ WL EL E + ++ + G + +DDFGTG ++ Sbjct: 257 LIADIARLLKQNQVEPHWLEVELTEGSLMENTQHTIASLQRLHTMGVKISIDDFGTGYSS 316 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L D +KI + +P+ + ++ L + V+ EGVET + + Sbjct: 317 LAYLRRFPIDTLKIDIAFIREVTSNPQDAAITRTIIELAHSLNLRVVAEGVETQAQLAFL 376 Query: 227 QNSPAFAAQGWFLSRPAPIET 247 + + QG+ SRP P+ET Sbjct: 377 KEAGCDQIQGYLFSRPLPVET 397 >UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 Tax=Comamonas testosteroni RepID=D0IZ49_COMTE Length = 1115 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 103/266 (38%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 + + +R + + LQ F L +QP + G+++ E L HP Sbjct: 840 LQSALQERRTLEQDMRAGLQAGEFEL------FYQPQVEM-GKVIGAEGLLRWKHP--EK 890 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V++ LA+ A L+ SVN+ Sbjct: 891 GFVPPAHFIPLAEETGVILPLGDWVLQAACQQLAKWAKHPRYAQLVLSVNVSPKQFHQSG 950 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 ++L+ + L+ EL E + + D T A M LDDFGTG ++ Sbjct: 951 FVEQVLKALAEHGADARRLKLELTEGMLVSDVDDTIAKMMRLKSYGIGFSLDDFGTGYSS 1010 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI R + P + ++ L VI EGVET + R + Sbjct: 1011 LSYLKRLPLDQLKIDRSFVRDVLTDPNDAAIARTIVALAKSLSLHVIAEGVETQAQCRFL 1070 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + +A QG+ +S P P+ + V Sbjct: 1071 EGIRCYAWQGYLMSPPVPVSEFESLV 1096 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 91/265 (34%), Gaps = 19/265 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + R + +L+ R F L +QP + L E L HP Sbjct: 693 MEEEARSRHALEHNLRGALEAREFHL------VFQPQVRLESSELTGFEALLRWKHPSR- 745 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + + E + L A + +VN+ A Sbjct: 746 -GFVSPAEFIPIAEENGLIVPIGEWV-LRTACATAASWPDVTVAVNLSPVQFRARGLAAM 803 Query: 120 ILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMANFSAL 170 + + L E+ E L + G + LDDFG G ++ S L Sbjct: 804 VTSALAEAGLPPQRLELEVTETALLDDSEATIEILHQLRALGVRVSLDDFGVGYSSLSYL 863 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 + +D IKI R L +SPE + + L + EGVET E+ V+ Sbjct: 864 RKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEGVETEEQLDFVRECG 923 Query: 231 AFAAQGWFLSRPAPIETLNTAVLAL 255 A QG++ RP P + + L Sbjct: 924 CTAVQGYYFGRPCPAAEVARTIETL 948 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 100/272 (36%), Gaps = 28/272 (10%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + ++R +++ R F L +QPI RL+ E L HP Sbjct: 446 MHTRAVKRWQLESDLRWAIERREFCL------VYQPIVSIQTERLIGFEALVRWHHP--Q 497 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFF-----IEHGLLASVNIDGP 109 + P + + + + V+ E L Q F E L SVN+ Sbjct: 498 RGWISPAEFISVAEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVSVNLSSK 557 Query: 110 TLIALRQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDF 160 I + +++ L+ EL E I + ST + E G L LDDF Sbjct: 558 QFCQPDLIHYIQQVLQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGIQLALDDF 617 Query: 161 GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETP 220 GTG ++ S L D +KI R + E + +L L V+ EGVET Sbjct: 618 GTGYSSLSYLHRFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVVAEGVETQ 677 Query: 221 EEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 + +Q AQG+ +SRP E + Sbjct: 678 AQLDHLQALQCGYAQGYLISRPLTPEKTEQFL 709 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 97/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M R+ R+ +L + F + +QP ++ E L P Sbjct: 283 MNRKAKSRLELEGRMRRALANQEFVV------FYQPKVSADRDAIVGAEALIRWMDP--E 334 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIE----HGLLASVNIDGPTLIALR 115 +PP + S ++E + + + + + + + SVN+ + Sbjct: 335 RGMVPPGEFIPVAEESGQIEPIGTWVLRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPS 394 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKDST----FASMCEFGP-LWLDDFGTGMAN 166 + ++ WL E+ E + + T ++ + G L +DDFGTG ++ Sbjct: 395 LLQTVTEVLDSTGLDPKWLELEITESMLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSS 454 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L +KI R + +P+ + ++ L V+ EG E E + Sbjct: 455 LSYLGRFPITTLKIDRAFIADVDTNPKTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFL 514 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 +N+ QG++ SRP P + + Sbjct: 515 RNNGCDTVQGFYYSRPVPADEFERMM 540 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 103/266 (38%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHP--- 56 M +V +R+S +L F L +QP + T GR++ VE L P Sbjct: 599 MNSRVSERLSMETGLRHALARNEFLLH------YQPRVNTTTGRIVGVEALIRWQQPQKG 652 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P +P I + A + F + + SVNI Sbjct: 653 LILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQ--MRISVNISCRQFTHDN 710 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 I + + L E+ E + + S + E G + +DDFGTG ++ Sbjct: 711 LPDTIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSS 770 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + + TL + +++L + G++ EGVE E+ + Sbjct: 771 LSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFL 830 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG++ S+P P ETL + Sbjct: 831 EERNCQEVQGYYFSKPLPAETLQPLL 856 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 100/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + A +L + L +QP T G ++ E L HP Sbjct: 887 MQAHSARTLQLGNALRHALTRGQLHLH------YQPQISTQDGHVVGAEALLRWQHP--E 938 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQI--DLLAQKADFFIEHGLL---ASVNIDGPTLIAL 114 + P + + ++ + E + + Q D+ ++ GL +VN+ Sbjct: 939 LGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDW-MDSGLPPMIMAVNLSAAQFRQS 997 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + ++ +L EL E + + + G + +DDFGTG + Sbjct: 998 NLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYS 1057 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI + + P+ + + + ++++ + I EGVET + Sbjct: 1058 SLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSF 1117 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG++ S+P P E + + Sbjct: 1118 LRLQGCNEVQGYYFSKPLPAEQFVSYL 1144 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 99/268 (36%), Gaps = 25/268 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ +++ + F L +QPI+ ++ E L HPL Sbjct: 471 MHSNASAQLQLEVDLRRAIERQEFQLH------YQPIFHLETAAIVGFEALLRWHHPLR- 523 Query: 60 SQRLPPDRYFTEITVSHR-----MEVVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 + P + + V++E L++ F +E L SVN Sbjct: 524 -GLISPVEFIPVAEETGLILPISWWVLQEACRQLSRWQTQFPLEVPLFVSVNFSSKQFSE 582 Query: 114 LRQQPKILRQIE----RLPWLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGM 164 + P+I + L+ E+ E + ++T A + E L +DDFGTG Sbjct: 583 VGLIPQIEDILHTTGLAPQSLKLEITESAIMENAEATAAKLLEIKALGIQLGIDDFGTGY 642 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L D +K+ R + E + + L + EGVET E+ Sbjct: 643 SSLSYLHRFPVDILKVDRSFVSAMDSH-ENLQIVHTITMLSQNLGMRAVAEGVETAEQAA 701 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ AQG+F S+P ++ + Sbjct: 702 QLRAMNCQYAQGYFFSKPIDASSMEHLL 729 >UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 Length = 1578 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 101/268 (37%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M +V R + +L++++F + QP + G + E L HP Sbjct: 1320 MQLEVESRFALEADLRSALEQKQFQV------YLQPQVDSHGVWIGAEALLRWNHP--GR 1371 Query: 61 QRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP+ + + V+++ LA+ + L ++N+ Sbjct: 1372 GFIPPNIFIPIAEEIGLIGGIGDFVLEQVCQYLARLQQLGLT--LRIAINVSPRQFRQAN 1429 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKD-STFASMCEFGPLWL----DDFGTGMAN 166 +I + L E+ E + + A+M E L + DDFGTG ++ Sbjct: 1430 FAKEIKNLLACTGVDPYRLTLEVTEGLIVEDTHQAIATMFELQTLGIHFSVDDFGTGYSS 1489 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + + +KI R Q L ++ + + ++ EGVET E+ + + Sbjct: 1490 LSYLKRLPLNELKIDRAFVQDAPQDLNNAALVEAIISVARTFNLAIVAEGVETEEQVQFL 1549 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+F RP PI+ + + A Sbjct: 1550 AQLGCNFYQGYFYGRPMPIDEFHQKLTA 1577 >UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNV7_THASP Length = 884 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 102/268 (38%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M+ V R +L++R+F L +QP G ++ VE L HP+ Sbjct: 618 MLADVRARADVEAGLWIALEQRQFVLH------YQPQVAADGAVLGVEALVRWHHPVR-- 669 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + V++ LA AD L+ +VN+ + Sbjct: 670 GLVPPGEFIPLAEECGLILPLGRWVLEAACAQLAAWADDPWRSRLVIAVNVSARQFLHED 729 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMAN 166 ++ +ER L EL E + ++ G LDDFGTG ++ Sbjct: 730 FVAGVVAALERSGADPGRLDLELTESSLVTDVDKVSEKMEALKALGVGFSLDDFGTGYSS 789 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI R + P + ++ L + VI EGVE E+ + Sbjct: 790 LAYLKRLPLDQLKIDRSFVRDILVDPNDAAIARMIIVLADNLGLRVIAEGVECEEQRDFL 849 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + + QG+ S P PI+ L + A Sbjct: 850 ARNGCSSYQGYLFSAPQPIDALEAFLDA 877 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 102/268 (38%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTH---- 55 M + R+ +L + F L +QP G + +E L Sbjct: 572 MNASTLARLRLESNLHRALARQEFQLH------FQPKVDLAHGHIYGMEALLRWRSHELG 625 Query: 56 PLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 P++P+ +P I+ V+++ + + G +VN+ + Sbjct: 626 PVSPADFIPIAEESNLISTIGEW-VLEQACRQARHWLNLGLLPG-TVAVNLSSKQMTQGD 683 Query: 116 QQPKILRQIER--LP--WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 + R +E LP +L E+ E + + T ++ G + +DDFGTG ++ Sbjct: 684 IVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSS 743 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D +KI R L + + + S ++ + + EGVE E + + Sbjct: 744 LSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFL 803 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ SRP P T+ +L Sbjct: 804 LDHGCQYGQGYLFSRPVPAATMEQLLLE 831 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 24/258 (9%) Query: 6 IQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLP 64 +R+ + +++Q L +QP T ++ E L HP +P Sbjct: 556 EKRLYIENSLRKAIQNEELLL------FFQPKISTITNQVCGAEALIRWKHP--ERGWVP 607 Query: 65 PDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLI----ALR 115 P + S + V++E L Q ++ + S+N+ G L + R Sbjct: 608 PIEFIPVAEDSGIIERIGDWVLEEACRLKKQWSEKNLP-SFPLSINVSGKQLARANWSHR 666 Query: 116 QQPKILRQIERLPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSAL 170 Q IL+ + EL E + F + E G + +DDFGTG ++ S L Sbjct: 667 VQATILQYGINPEEIELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGYSSLSYL 726 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 ++ D IKI R V L + + R + ++++ + VI EGVE P + + + Sbjct: 727 KKINADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRDLLHDLG 786 Query: 231 AFAAQGWFLSRPAPIETL 248 QG+ S+P P + Sbjct: 787 CHMIQGYLYSKPLPEDEF 804 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 23/261 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + V +++ +L + F L +QP G ++ VE L HP Sbjct: 542 LEQAVNDKMNIQNELNRALARQEFLLH------YQPQVSAKSGAIVGVEALIRWDHP--E 593 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 L PD++ + + + V++ Q D ++ L +VN+ + Sbjct: 594 RGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKP-LRVAVNLSARQFLKQ 652 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKDSTFASMCEFGPL----WLDDFGTGMAN 166 I + + +L E+ E + ++ E L +DDFGTG ++ Sbjct: 653 DFTQMIAEILHQTRLAPEYLELEITESSMIDVHRATQALKELKQLGVHVAIDDFGTGYSS 712 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L E + +KI R + + P + + S ++ + + VI EGVET EE + Sbjct: 713 LYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFL 772 Query: 227 QNSPAFAAQGWFLSRPAPIET 247 Q QG+ SRP P E Sbjct: 773 QEHLCEEVQGYLFSRPLPSED 793 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 97/266 (36%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M +V R + ++ +E++F L QP G + E L HP + Sbjct: 773 MQTEVEARAALERDLRQAQREKQFVL------YLQPQVDQSGHVSGAEALIRWQHPTH-- 824 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++E L L ++N+ Sbjct: 825 GLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNPDTAHLTLAINVSALQFRNPD 884 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMC----EFGP-LWLDDFGTGMA 165 + R I L+ E+ E + L D T M + G L LDDFGTG + Sbjct: 885 FVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERMQVLKNQLGVGLSLDDFGTGYS 944 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L ++ D IKI R + +P + ++ L + VI EGVET E+ Sbjct: 945 SLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALGRSFSLNVIAEGVETIEQRDA 1004 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTA 251 + QG+ RP PI+ Sbjct: 1005 LIARGCLTFQGYLFGRPGPIDAFPAC 1030 >UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MED7_DIAST Length = 894 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 99/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R ++L+E +F L QP + G ++ VE L HP Sbjct: 625 MQVALSARARLESDLQDALREGQFLLHL------QPQFTRDGAVVGVEALLRWQHPERGL 678 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 P + S + V+ +LLA+ L SVN+ + Sbjct: 679 VL--PAEFIGVAEDSELIVPLGRWVLASACELLARWQASPRLRELSLSVNVSARQFRSPD 736 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMAN 166 ++ + + R L EL E + L + + A M + +DDFGTG ++ Sbjct: 737 FVEQLSQLLLRSGAPAHRLELELTESLVLEDVEDSIAKMHQLRTKGVRFAVDDFGTGYSS 796 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L+ + +KI R L +S + +L + V+ EGVET E+ + Sbjct: 797 LAYLTRLPLHRLKIDRTFVHHLGESRSDDVVVQTILGMARNLDLEVVAEGVETEEQRSFL 856 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ L+ P P+E L Sbjct: 857 ALHGCDVYQGYLLAHPMPVEALQARY 882 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 98/267 (36%), Gaps = 22/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M + ++R+ +L++ F L +QP G ++ E L P Sbjct: 559 MNTRAVRRLFIEGNLRRALRQGEFML------YYQPKIDLASGMMIGSEALIRWQDPEHG 612 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P Q +P I V++E + + + + SVNI Sbjct: 613 LVYPKQFVPIAEESGLIVPIGSW-VLREACRQVRAWQESGL-VAVPVSVNISAVEFRHKD 670 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + ++ +L EL E I + ++ G L +DDFGTG ++ Sbjct: 671 FLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYSS 730 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI + + P+ ++ ++ + + V+ EGVET E+ + Sbjct: 731 LSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFL 790 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 + QG+ RP P + +L Sbjct: 791 RTLHCDEGQGFLFGRPLPADEFARLLL 817 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 103/269 (38%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + R+ +L R F L +QP G + E L HP + Sbjct: 752 MNERAVARLKIETQLRGALARREFVLH------YQPKASLINGEITGFEALLRWQHPAH- 804 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ + + + + VVK + + + + ++N+ Sbjct: 805 -GLVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLH-PIAINLSARQFQQQ 862 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 I + L FEL E + + + + ++ FG + +DDFGTG + Sbjct: 863 DLDSIIGETLRATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYS 922 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + P+ T+ ++ L + V+ EGVET + Sbjct: 923 SLAYLKRFPLDVLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEF 982 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG++ S+P P+E + ++ Sbjct: 983 LIRHGCDEMQGYYFSQPLPLEGASKVLMG 1011 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 104/264 (39%), Gaps = 20/264 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + ++RI +++++ +F + +QP + +E L HP Sbjct: 448 MEAKSLERILMENEMRKAIEQEQFQI------YYQPKIDIATSAMTGMEALVRWVHP--E 499 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHG---LLASVNIDGPTLIALRQ 116 +PP+R+ + + + E I A K + L SVN+ + Sbjct: 500 LGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDL 559 Query: 117 QPKILRQIERLP----WLRFELVEHIRL---PKDSTFASMCEFG-PLWLDDFGTGMANFS 168 I ++ WL E+ E I + + + + G + +DDFGTG ++FS Sbjct: 560 VEMIKDILQETKLSPHWLELEITESIFVKMEEATAVLQQIRDIGIQISIDDFGTGYSSFS 619 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 + + D IKI + + E + + ++ + VI EG+E ++ ++ Sbjct: 620 YIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKE 679 Query: 229 SPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ S+P P + + + Sbjct: 680 NGCDHGQGYLFSKPLPTDDFDQLL 703 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 89/262 (33%), Gaps = 18/262 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M RQ +R + + +F L +QP+ R+ E L HP Sbjct: 570 MDRQAQKRRDMEIDLRYAFAKGQFEL------YYQPLVDVARDRVAGFEALLRWRHP--E 621 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + E + A + +VN+ + Sbjct: 622 RGMISPADFIPVAEDIGLIVGLGEWVLRQACAEAATWPSEIKIAVNLSPVQFRSRNLVQA 681 Query: 120 ILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSAL 170 ++ + + L E+ E + L + T M + G + +DDFGTG ++ S L Sbjct: 682 VIGALAQSGLSPRRLELEITESVFLAETEANLATLHQMRDLGVRISMDDFGTGYSSLSYL 741 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI R L Q P+ + + L EGVET + ++ Sbjct: 742 RSFPFDKIKIDRSFVQDLAQRPDCLAIVRAIAGLGRSLNITTTAEGVETQAQLDWLREEG 801 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG+ S P + + Sbjct: 802 CNEVQGFLFSPARPAGEIAALI 823 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 30/272 (11%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHP--- 56 M Q ++ ++ +++ + F + +QPI +++ E L HP Sbjct: 332 MHTQALKLLNLETDLRRAIENQEFLV------YYQPIMALEKTKIVGFEALIRWQHPKKG 385 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIE-HGLLASVNIDGPTLIAL 114 ++P + +P I ++ V+KE L + + L SVN+ L Sbjct: 386 FISPGEFIPIAEETGLIIPIGQI-VLKEACQQLKTWQEKLPKAKNLTISVNLSSQQL--- 441 Query: 115 RQQPKILRQIE--------RLPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFG 161 ++P+IL+ I+ + L+ E+ E + + + E + LDDFG Sbjct: 442 -KEPEILQHIDHSLNVTGLQPESLKLEITESLLMENADVATTLLRQLKERKIQISLDDFG 500 Query: 162 TGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPE 221 TG ++ S L D +KI R + + E T+ ++ L + V+ EG+ET + Sbjct: 501 TGYSSLSYLHRFPVDTLKIDRSFVNCIGKPEENLTIIQSIMALAHNLDMDVVAEGIETEK 560 Query: 222 EWRDVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + ++ QG+F S+P P + L Sbjct: 561 QLTFLKFLECEFGQGYFFSKPLPSHEVENQFL 592 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 92/269 (34%), Gaps = 25/269 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + ++R+ A +++ L +QP T R E L HP Sbjct: 828 MNTRALERLLLENALRRAIERNELTLH------YQPQVAATSDRPNGCEALVRWQHPDF- 880 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ S + V++E + A + L+ VNI Sbjct: 881 -GLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGL--HLMVGVNISALQFRRA 937 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKDSTF----ASMCEFG-PLWLDDFGTGMA 165 +++ + + E+ E + + G L LDDFGTG + Sbjct: 938 DFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYS 997 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + +KI R L PE + + L L V+ EGVET + Sbjct: 998 SLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDF 1057 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ SRP + + A Sbjct: 1058 LVARGCHTLQGYLYSRPLDVAAFEAWMQA 1086 >UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLU9_AZOVD Length = 834 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 23/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + + A E++Q + + +QP + GR L E L HP Sbjct: 568 MQACAARSLLLEGALREAVQWGQLDV------YYQPQFDITGRKLEGAEALVRWRHP--E 619 Query: 60 SQRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + ++ ++ V++ + D + + +VNI Sbjct: 620 LGFISPAEFIPIAEITGQIIKIGDLVLRRATQQMRHWLDAGLPGDMSIAVNISMAQFRDT 679 Query: 115 RQQPKI---LRQIERLPW-LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 KI L + + PW L EL E + + S+ G L +DDFGTG + Sbjct: 680 ALLEKIDTALAESQLPPWALELELTESVAMDDPEQVVDIVRSLRSRGVKLSIDDFGTGYS 739 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L ++R +KI R + + R++ ++ L I EG+ET E+ + Sbjct: 740 SLSYLKKLRVHKLKIDRSFIQAISSAGSDRSIVQAIIGLAKDLDMQTIAEGIETEEQRQL 799 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ + QG+ +P P A+L Sbjct: 800 LEALGCDSGQGYLFCKPLPASEFLPALLE 828 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M +V S + +L+ +LQ +QP G L VE L HP+ Sbjct: 659 MNFRVDLLFSMEKDLRLALERGELFLQ------YQPQADLASGTLSGVEALIRWDHPVKG 712 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + ++ V++ +A+ + H L +VN+ L Sbjct: 713 Q--VSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGM-HDLTIAVNLSIRQLRQP 769 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 I + L E+ E I + + + M + G L +DDFGTG + Sbjct: 770 DLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFS 829 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L ++ + +KI + + + ++ L +R VI EGVET E+ Sbjct: 830 SLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDF 889 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+F SRP E V A Sbjct: 890 LRIRGCDEIQGYFYSRPLLAEDFMRFVKA 918 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 95/267 (35%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V +R + L + L +QP GR+ E L HP Sbjct: 785 MQAAVSERAALEADLRAGLDAGQLEL------FYQPKVDQ-GRITGAEALVRWRHP--DR 835 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + V++ LAQ + + L +VN+ Sbjct: 836 GFISPAEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGELTVAVNVSPRQFHEGS 895 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 P++L + LR EL E + L + T A M + LDDFGTG ++ Sbjct: 896 FVPQVLEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGYGVGFSLDDFGTGYSS 955 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + +KI + + P + ++ L V+ EGVET + + Sbjct: 956 LAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLRVVAEGVETEAQRAFL 1015 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 + + A QG+ LS P VL Sbjct: 1016 ERNGCHAWQGYLLSPPLQAAAFEALVL 1042 >UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IYN4_9CHRO Length = 837 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q +R+ L+++ F + +QPI +L+ E L HP Sbjct: 574 MYAQAQKRLELETNLRIGLEKQEFIV------YYQPIISLVDKKLVGFEALVRWQHP--Q 625 Query: 60 SQRLPPDRYFT-----EITVSHRMEVVKEQIDLLAQKADFFIEHG-LLASVNIDGPTLIA 113 +PP+ + ++ + V+ E LA + E L S+N+ L Sbjct: 626 KGLIPPNEFIPVSEDTKLIIPIGEWVLLESCRQLATWQQKYPECSMLKMSINLSIKQLKN 685 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGM 164 KI + +++ L+ E+ E I + + G L +DDFGTG Sbjct: 686 NTFVSKIEKILDQTGLNGNSLKLEITESILMENILELRDILRQIKSLGIELSIDDFGTGY 745 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + D +KI R + + QS + ++ L ++ VI EG+ET ++ + Sbjct: 746 SSLSYLHNLPVDNLKIDRSFVIEMNQSEGNYRIIETIITLAHQLGLSVIAEGIETEQDLQ 805 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTA 251 +++ QG+ S+P P + + + Sbjct: 806 TLRDLQCEFGQGYLFSKPLPSQAIEST 832 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 22/261 (8%) Query: 9 ISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDR 67 + A +L+ ++F L +QP G+++ E L HP + P Sbjct: 728 LQIENALRRALERQQFELH------YQPQVSLGTGQVVGAEALLRWHHP--ELGVVAPAE 779 Query: 68 YFTEITVSHRMEVVKEQ-IDLLAQKADFFIEHGLL---ASVNIDGPTLIALRQQPKILRQ 123 + S ++ + E + A+ A +++ L SVN+ + + R Sbjct: 780 FIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRC 839 Query: 124 IERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSALSEVR 174 +++ L EL E + + + + G L +DDFGTG ++ S L + Sbjct: 840 LQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQ 899 Query: 175 YDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAA 234 +KI + L R + S ++ + EGVET + + ++ Sbjct: 900 IYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEG 959 Query: 235 QGWFLSRPAPIETLNTAVLAL 255 QG+ SRP P + + A+ Sbjct: 960 QGYLFSRPLPADAFEAYLRAM 980 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +R+ ++ R F L +QP G ++ VE L HP Sbjct: 638 MNIATTERMCLESDLRLAITRREFLLH------YQPQLDLRSGTIVGVEALIRWQHPTR- 690 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V++E L + I H L S+N+ + Sbjct: 691 -GLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITH-LRMSINLSAGQFLDK 748 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRL----PKDSTFASMCEFG-PLWLDDFGTGMA 165 +I + L E+ E + + S ++ G L +DDFGTG + Sbjct: 749 TLPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYS 808 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + +KI R + P + + L ++ V+ EGVET + + Sbjct: 809 SLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKF 868 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+ +S+P P + + Sbjct: 869 LLSIGCEKVQGYLISKPLPADQAERFI 895 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + ++ ++ L +Q + R + E L HP+ Sbjct: 573 MQLAVETRAALEADMRHAVTGKQLRL------YYQIQLTSDHRPLGAEALIRWMHPVR-- 624 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ S + V++ L + L+ ++N+ Sbjct: 625 GLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLILAINVSAQQFNKHD 684 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 + + L+ EL E + L S ++ G L LDDFGTG ++ Sbjct: 685 FVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGVKLALDDFGTGYSS 744 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D IKI R + P + +++L + + VI EGVET ++ + Sbjct: 745 LSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNVIAEGVETEDQLNFL 804 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + + A QG+ +P PI+ + Sbjct: 805 KQNGCMAYQGFLFGKPMPIDEFEALL 830 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 22/260 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHP--- 56 M + V++R+ +++ +F L +QP I T GR++ VE L HP Sbjct: 949 MNQSVLKRLQFDHDLRVAVEAGQFELH------YQPQINSTSGRVVKVEALVRWQHPREG 1002 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++P++ +P I V+ E L D I L +VN+ L + Sbjct: 1003 LVSPAEFIPIAEETGLILPLGEW-VLNEACRQLRLWRDAGI-TDLTVAVNLSAHQLHSPA 1060 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 P + R + L E+ E + + + ++ + G L +DDFGTG ++ Sbjct: 1061 LIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSS 1120 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +K+ + + +P + + + L + V+ EG+ET + R + Sbjct: 1121 LSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLL 1180 Query: 227 QNSPAFAAQGWFLSRPAPIE 246 + QG+ S P P E Sbjct: 1181 ASHRCDFMQGYLFSAPLPAE 1200 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 94/264 (35%), Gaps = 25/264 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC--GRLMAVELLTVVTHPLN 58 M + + A +L+ L +QP GR+ VE L HP Sbjct: 775 MQLRSAHTLRLETALRRALERNELVLH------YQPQIDLVDFGRVAGVEALIRWQHP-- 826 Query: 59 PSQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA 113 + P + + + V++ + L ++ G VN+ Sbjct: 827 EFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLG-QVGVNLSAHQFRQ 885 Query: 114 LRQQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGM 164 + R + L EL E + + ++ G + +DDFGTG Sbjct: 886 QNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGY 945 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + L R D +KI + L Q PEG + ++ L I EGVE PE+ Sbjct: 946 SSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLA 1005 Query: 225 DVQNSPAFAAQGWFLSRPAPIETL 248 ++ S QG+ SRP P + L Sbjct: 1006 FLRASGCQEVQGYLFSRPLPPDEL 1029 >UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDV9_DESAH Length = 708 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 22/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 + R I+R S +S L +QP + R ++ E L HP Sbjct: 446 LNRAAIERFSMERDLKKSFARDELVL------YYQPQIRFADRKIVGAEALIRWIHPHK- 498 Query: 60 SQRLPPDRYFTEITVSHR-MEVVKEQIDLLAQKADFFIEHGL---LASVNIDGPTLIALR 115 +PPD++ + +++ K + +++ D + GL ++N+ G L Sbjct: 499 -GMIPPDKFIPLAEETGLVIDINKWVLKTASRQNDEWTRAGLNSIRVAMNLSGYKLATQN 557 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 I ++ + + L E+ E+I + D F + E + LDDFGTG ++ Sbjct: 558 IIQDIKEALKTVKFDSKKLELEITENILMQDDDETMQIFQQIREMNISIALDDFGTGYSS 617 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L+ + IKI R + + R + ++ + + + +I EG+ET E++ + Sbjct: 618 LSYLTSFPVNTIKIDRSFIMGSALQVDNRVIIKAIIAMGHSLGKTIIAEGIETKEQFDLL 677 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 + AQG++LS P P + ++ Sbjct: 678 KRYGCDEAQGYYLSPPIPADEFAKLLV 704 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 94/268 (35%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 + R V R +L E RF + +QP GR++ ELL H Sbjct: 672 LHRAVEARFELENELRHALDEDRF------SVVYQPQVDAEGRVIGAELLLRWEH--AQR 723 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + +V++ L L SVNI Sbjct: 724 GAISPAEFIPVAEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRDLTLSVNISARQFRDPH 783 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 P + ++ L+ EL E + L + T + G LDDFGTG ++ Sbjct: 784 FVPHLREILQETGAPGDRLKLELTESMLLEEIDTVVAHIDELRALGVEFALDDFGTGYSS 843 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L ++ +KI + + P + +++L VI EGVET E+ + Sbjct: 844 LAYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLDLDVIAEGVETVEQRAFL 903 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ P + L AVL Sbjct: 904 FGLGCRHFQGFLYGYPGDLADLERAVLG 931 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 108/269 (40%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + +R+ A ++L+E + +QP +L+ +E L HP+ Sbjct: 331 MTERAFERVFLETALRKALEEDELVV------YFQPQIDARENKLVGMEALVRWEHPIM- 383 Query: 60 SQRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD++ ++ + V+K+ + + + G ++N+ + Sbjct: 384 -GFIYPDKFIPLAEITGMIVQLDRLVMKKALTQFKKWDKAGLNPG-KLALNLAIKQIEEN 441 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I ++ + FEL E+ + T + + G + +DDFGTG + Sbjct: 442 DFIEFIENILDCEDCSYKNIEFELTENQIMNNPEASIETLQKLSDLGISIAIDDFGTGYS 501 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + D +KI R L Q + + ++ L + VI EGVET ++ Sbjct: 502 SLAYLKRLPIDKLKIDRSFIKDLPQDADDAAITKTIISLCSSLNLKVIAEGVETEKQKNF 561 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + + QG++ SRP IE + ++ Sbjct: 562 ILQNGCQFIQGYYYSRPLSIEDMTKYLIE 590 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 24/263 (9%) Query: 5 VIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQRL 63 +QR+ A +L +Q E +QP G ++ E L P + Sbjct: 576 ALQRLEMETALRRAL------IQGELVLHYQPKLDLASGVIVGGEALLRWQRP--GFGLV 627 Query: 64 PPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQP 118 PP R+ + + V+ E + A+ + ++ +VN+ + Sbjct: 628 PPYRFIPLAEETGLIVPIGAWVINETCRQIRAWAEAG-QPSVMVAVNVSARQFAGGELEA 686 Query: 119 KILRQIER----LPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMANFSA 169 + + + L EL E + + ++ G + LDDFGTG ++ S Sbjct: 687 VLATALRKHAVDPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYSSLSY 746 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 LS D +KI R + P+ + + ++ L +R V+ EGVET + ++ + Sbjct: 747 LSRFPVDELKIDRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQLSYLRKN 806 Query: 230 PAFAAQGWFLSRPAPIETLNTAV 252 QG+ S P P + T V Sbjct: 807 RCDQIQGYLFSAPVPADEFATLV 829 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 21/266 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + R++ +++ F L +QP GR ++ E L P Sbjct: 789 MFTAALGRMTMKNRLRRAVELEEFEL------YYQPKIAADGRTVVGAEALIRWVQPER- 841 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHG----LLASVNIDGPTLIALR 115 + P + + + + E + A + + L +VN+ Sbjct: 842 GGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPG 901 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 +I ++ + L E+ E + + ++T + + G L LDDFGTG ++ Sbjct: 902 LDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTGYSS 961 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L D +KI RE L E R + ++ L + V+ EGVE ++ + Sbjct: 962 LSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQVAFL 1021 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ SRP P + + Sbjct: 1022 RQRGCDVFQGYHFSRPLPAKEFEQFL 1047 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 89/266 (33%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M +R++ +L +QP G L E L HP Sbjct: 434 MDHHARRRLTVESELRRALAGGELEAH------YQPQVDLATGALTGAEALVRWRHPERC 487 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L P + + I +V++ + + L +VN+ G Sbjct: 488 LLLPGEFIAVAEETGLIVPLGE-QVLRAACRQSTRWREAGRP-DLKVAVNLSGHQFRQHD 545 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 ++ + L E+ E + + +T A + G L +DDFGTG ++ Sbjct: 546 LVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSS 605 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L D +KI R + + + ++ + ++ EGVETP + + Sbjct: 606 LSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFL 665 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ R P E + + Sbjct: 666 VAQGCRSGQGFLFGRAMPAEDFHHII 691 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 95/264 (35%), Gaps = 21/264 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M QV R+ A +L+ L +QP G+++ E L HP Sbjct: 809 MNIQVRDRLQLEGALRSALENGELHL------AFQPQVDGGSGQVIGAEALLRWQHP--E 860 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHG---LLASVNIDGPTLIALRQ 116 +PP R+ + + + E + A + E L +VN+ + Sbjct: 861 LGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAGRRLRIAVNVSARQFRSPDL 920 Query: 117 QPKILRQIERLPWLRFEL----VEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANF 167 +I ++ L E + + + + + G L LDDFGTG ++F Sbjct: 921 PARIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGTGYSSF 980 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L D +KI + + G + ++ L + VI EGVETP + R + Sbjct: 981 AYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQQRQLF 1040 Query: 228 NSPAFAAQGWFLSRPAPIETLNTA 251 QG+ RP P A Sbjct: 1041 EFGCDELQGYLFGRPVPAAEFPHA 1064 >UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacillaceae RepID=C5D6R4_GEOSW Length = 951 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHP--- 56 M + + R+ ++L+ + F+L +QPI G ++ E L HP Sbjct: 689 MNEETLYRLEMERYLRKALENQEFFL------CYQPIIDIHKGVIVGNEALIRWRHPKLG 742 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P++ + I R V+ + + L SVN+ Sbjct: 743 LVRPNEFISLAEETGLIHEIGRW-VLVTACKQTKKWQQLW-NQQLFVSVNVSARQFQHEG 800 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMAN 166 + + +E+ L EL E+ L + + G + +DDFG+G A+ Sbjct: 801 FIDDVKQALEQSQLSPNCLHLELTENSMLRNLHYSIQVMKELQQLGVGIAIDDFGSGYAS 860 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 FS L + + +KI R + + + ++ + + + EGVET E+ + Sbjct: 861 FSYLKNLPVNILKIDRSFVEQMHTNSSDIAIVKAIITMGHGLGLKTVAEGVETVEQLELL 920 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + AQG+ L RP E L+T + Sbjct: 921 KMLHCHHAQGYALYRPVTAEELSTYM 946 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 99/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M R E +LQ+++F L +QP R+ AVE L HP + Sbjct: 1137 MNEAASDRRQLEEDLHLALQQKQFVLH------YQPQVDAQRRVFAVEALLRWQHPHH-- 1188 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP R+ + + V++ + + L +VN+ Sbjct: 1189 GLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQPD 1248 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMAN 166 + + I+ L+ EL E + L T M L +DDFGTG ++ Sbjct: 1249 FVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSS 1308 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L+ + D +KI R L ++ + ++ + V+ EGVET + + + Sbjct: 1309 LSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFL 1368 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ SRP ++ + Sbjct: 1369 DSHGCDGYQGFLFSRPLAVDAFEDFL 1394 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 101/262 (38%), Gaps = 25/262 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPI-YQTCGRLMAVELLTVVTHPLNP 59 M ++ R+ A ++++E +F + +QP R+ E L HP Sbjct: 563 MTKREEHRLELETALRQAVEEGQFQVH------YQPQKNLATNRVSGFEALVRWQHPR-- 614 Query: 60 SQRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + H ++ V+++ Q D + + +VN+ G Sbjct: 615 LGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYD--ICMAVNLSGVNFSRD 672 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 ++ + +E + L E+ E + + + G L +DDFGTG + Sbjct: 673 DLPEQVRQVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYS 732 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + +KI R + + L S ++ + + V+ EG+E ++ Sbjct: 733 SLSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAI 792 Query: 226 VQNSPAFAAQGWFLSRPAPIET 247 + + QG+ +++P P E Sbjct: 793 LLSQECDEIQGYLIAKPMPAEQ 814 >UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SFB8_9CAUL Length = 726 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 22/263 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R E++ + +QP GR++ VE L +HP Sbjct: 454 MDATIKLRKLLETGLREAIHVEAIEV------VYQPQVDHNGRIVGVEALARWSHP--QR 505 Query: 61 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA--DFFIEHGLLASVNIDGPTLIALRQQP 118 + P + ++ + L+ ++A D GL ++N+ L + R P Sbjct: 506 GPISPAYFVPLAEECG---LMMDLGTLIMRRALIDSKRWPGLKVAINVSATQLRSSRFLP 562 Query: 119 KILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSA 169 ++ + + E+ E + L D +T ++ + G + LDDFGTG ++ S Sbjct: 563 ELKDMLRETGVEPRSIEIEITEGMLLNDDQPTQNTLNALRQMGFSIALDDFGTGYSSLSY 622 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 LS D IKI R L P+ L ++ L ++ EGVET + ++ + Sbjct: 623 LSRYPVDKIKIDRSFVSNLGVDPDAEALIRAIIKLAKALHLSILAEGVETKAQSHILRQA 682 Query: 230 PAFAAQGWFLSRPAPIETLNTAV 252 QG+ S+P ++ + Sbjct: 683 GCAIIQGYLFSKPVDRSEIDIMM 705 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 100/264 (37%), Gaps = 22/264 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + + A +L+ L +QP T G+++ E L HP Sbjct: 685 MQLSASRNLQLENALRHALKRNELQL------YYQPQISTSNGQIIGAEALLRWHHP--E 736 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQI--DLLAQKADFFIE--HGLLASVNIDGPTLIALR 115 + P + S ++ + E + + Q ++ + ++ +VN+ Sbjct: 737 LGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKN 796 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 I + + +L EL E + + + + E G + +DDFGTG ++ Sbjct: 797 LLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSS 856 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + + +KI + + P+ R + S ++ + + I EGVET E+ + Sbjct: 857 LSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFL 916 Query: 227 QNSPAFAAQGWFLSRPAPIETLNT 250 + QG++ S+P P Sbjct: 917 RLHGCHEVQGYYFSKPLPSVEFEQ 940 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 100/263 (38%), Gaps = 20/263 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLN- 58 M Q+I R++ ++++ F L +QP I G L+ E L H + Sbjct: 526 MNIQLIDRVALTHDLKQAVKNSDFTL------VYQPKICLKQGNLVGFEALIRWNHKIRG 579 Query: 59 ---PSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 P++ +P I R + L + + + +VN+ Sbjct: 580 AVGPTEFIPVAEQTGLIIPLGRWVITTACEQLRTMYDEEIVNDSVSMAVNLSAHQFQDEH 639 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 I +I + EL E + + ++ + G + +DDFGTG ++ Sbjct: 640 LVDFIRDRINTFDIKPGQFEIELTESVLMENFDNAIEKLEALRQLGIQISIDDFGTGYSS 699 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + + +K+ R + + S ++ + + V+ EGVET ++ + + Sbjct: 700 LGYLKRLPVNTVKVDRSFVTDIPNDKSDMEITSAVIAMAHNLNYTVVAEGVETEQQLQFL 759 Query: 227 QNSPAFAAQGWFLSRPAPIETLN 249 ++S QG+F S+P P L Sbjct: 760 EHSGCDYGQGYFFSKPLPDHELE 782 >UniRef50_Q2BRN8 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRN8_9GAMM Length = 690 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 100/265 (37%), Gaps = 24/265 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + + +S +L + L +QP G++ A+E L HPL+ Sbjct: 404 MDEEAQRTLSIEHDLRSALDGNQLRL------VYQPQISADNGKITAIEALLRWDHPLDG 457 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PPD + + + V+ E D + + VN+ Sbjct: 458 P--IPPDEFIPHAEETGLIIPIGRWVMAEACKAAKAIQDLGLPP-IKVCVNLSTRQFDDP 514 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 I IE WL E+ E + + ST S+ + G L +DDFGTG + Sbjct: 515 ALISHIEEAIETSGLDPRWLELEITESMLMRDMSTAIDILNSIKQKGISLAIDDFGTGYS 574 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L ++ D +KI R + + + S ++ + + V+ EGVE + Sbjct: 575 SLSYLKKMPVDLLKIDRSFLQDIPSDRDNMAITSTIIAMTKQLGLSVVAEGVENQAQMAF 634 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNT 250 + + QG+ +S+P + + Sbjct: 635 LNRNQCTLMQGYLISQPVSLTQFTS 659 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 20/265 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHP---- 56 M + R + ++L + L +QP T GR++ VE L HP Sbjct: 446 MQAAMDLRGALESDLHQALALDQLRLH------YQPQIDTAGRVIGVEALLRWWHPQRGL 499 Query: 57 LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 ++P++ +P I R +++ L+ L +VN+ Sbjct: 500 VSPNEFVPLAESTGLILPIGRW-ILETSCVLIKNWESDACTRSLQVAVNVSARQFRQADF 558 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMANF 167 ++ R ++ L+ EL E + L + T A M L LDDFGTG ++ Sbjct: 559 VEQVKRSLKASGANPARLKLELTESVLLKNVEDTIAKMLAIKRLGVAFSLDDFGTGYSSL 618 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L+++ D +KI + L + + T+ ++ + VI EGVE+ + + ++ Sbjct: 619 SYLAQLPLDQLKIDQSFVRKLPGARKEETIARTIITMGRELDMNVIAEGVESEAQRQFLE 678 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAV 252 A QG+ SRP P+E L + Sbjct: 679 AHGCHAFQGYLFSRPLPVEHLTVFL 703 >UniRef50_Q2W5V0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W5V0_MAGSA Length = 820 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 107/266 (40%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + R+ ++ +F L +QP+ GR + VE L ++P Sbjct: 558 MNEEAEARLRMEGELRRAVGTDQFHL------VYQPLVAVATGRAVGVEALLRWSNP--E 609 Query: 60 SQRLPPDRYFTEITVSHRMEVVKE-QIDLLAQKADFFIEHG---LLASVNIDGPTLIALR 115 +PPDR+ + + + ++ + A ++E G L +N+ Sbjct: 610 LGNVPPDRFIPQAETCGVIVAIGRMVLETACRDARRWVEDGHADLRLCINVSPRQFQDAG 669 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 + + L E+ E + L + D+ ++ + G L +DDFGTG ++ Sbjct: 670 FLGDVRAALAGSGLSPANLELEITEGLLLTERGDVDTLLRTLTDMGVKLSIDDFGTGYSS 729 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L +D +KI R + + + E + L ++ + + VI EGVET E+ + Sbjct: 730 LSYLERFPFDTLKIDRSFMIGMLERQERKVLVETIVAMASGLGLEVIAEGVETAEQMAHL 789 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 AQG+ SRP P ++ + Sbjct: 790 AAINCDIAQGYLFSRPVPAGDISPLL 815 >UniRef50_A3YAL9 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YAL9_9GAMM Length = 1003 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 22/265 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M ++++R++ A ++L + F L +QP + G L VE L HP Sbjct: 735 MQEKILERVNLETAMRKALIKDEFLL------YYQPQFDDLGVLRGVEALIRWHHP--DK 786 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ S + VV+E + LA+ D + + SVN+ Sbjct: 787 GIISPMQFIPLAEDSKLIIPIGEWVVREACNTLARWRDDPLLSQVKVSVNVSVIQFAQDD 846 Query: 116 QQPKILRQI----ERLPWLRFELVEHIRLPKDSTFAS----MCEFGPL-WLDDFGTGMAN 166 + + L+FEL E + + + + + G L LDDFGTG ++ Sbjct: 847 FVDLVRLILVETGASAKLLQFELTESMLIDDKANILAKMQGLKALGVLLSLDDFGTGYSS 906 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ +D +KI + L + L + + + VI EG+E E + Sbjct: 907 LSYLQQLPFDQLKIDQSFVRNLNGQGDQHPLALTITTMGHSLGLEVIAEGIEEKESLLKL 966 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTA 251 Q+ QG+F+ P P+ L Sbjct: 967 QSFGCNLFQGYFMGHPMPLSKLEEV 991 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 98/262 (37%), Gaps = 20/262 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIY-QTCGRLMAVELLTVVTHP--- 56 M +QR+ ++ + L +QPI G+L VE L HP Sbjct: 961 MHHHAVQRLQRENDLRRAIDRQELQLH------YQPIVCLKTGQLQGVEALVRWQHPEEG 1014 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA-- 113 + P + + I + + +L K F L S+N+ L Sbjct: 1015 LILPEEFVAIAEETGLIVPMGDWILWEASRQILELKQSFPQLSHLQVSINVSSRQLRDQR 1074 Query: 114 -LRQQPKILRQIERLPW-LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 L+ +IL P L+ E+ E + + S+ + + LDDFGTG ++ Sbjct: 1075 LLKTVDEILSSTNLAPQDLKLEITESLLIDNLNLAADVLKSLRQRNIQISLDDFGTGYSS 1134 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + IK+ R + + + + ++ L + VI EG+ET + Sbjct: 1135 LSYLHRFPINTIKVDRSFVNTMEPNNQNTAIVHTIVTLAHTLGLDVIAEGIETERHLTQL 1194 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 A QG++ +RP P E L Sbjct: 1195 HWLGCDAGQGYYFARPIPSEDL 1216 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 95/262 (36%), Gaps = 22/262 (8%) Query: 5 VIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLP 64 V R A +L+E +F L QP R+ E L HP + Sbjct: 517 VTLRADLEAALRTALEEEQFVL------YLQPQISEDVRVTGAEALIRWQHPTR--GLVM 568 Query: 65 PDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 P + + V+ LA A + +VN+ + Sbjct: 569 PGEFIAVAEDCGMIVPIGNWVLNTACKQLALWATQPAFAHMTIAVNVSAKQFHQHDFVEQ 628 Query: 120 ILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMANFSAL 170 +L + R L+ E+ E + + D M E +DDFGTG ++ + L Sbjct: 629 VLDALSRHGAQASGLKIEITESMLIANVDDVIVRMEELQHHGVGFAMDDFGTGYSSLTYL 688 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 + D +KI + + + + ++ L N VI EGVET E+ + + Sbjct: 689 KRLPLDVLKIDQSFVRDVLVDTNDAAIANMIVALANSMGLSVIAEGVETVEQMQYLARHG 748 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 A QG+ SRP P+E T++ Sbjct: 749 CHAYQGYLFSRPVPVERFETSL 770 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V + + +++ ++F L +QP + G+++ E L HP Sbjct: 556 MQEVVNAKSVMEASMRQAITGQQFVL------FYQPQINSNGQIIGAEALVRWRHP--QK 607 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P+++ + + V++ + L + A + +VN+ + Sbjct: 608 GLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQPATAQITMAVNVSARQFHQID 667 Query: 116 QQPKILRQI----ERLPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ R I L+ EL E + + ++ + G LDDFGTG ++ Sbjct: 668 LVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSS 727 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI + + + ++ L VI EGVE E+ + + Sbjct: 728 LAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQML 787 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + QG+ RP PIE Sbjct: 788 IDMGCRVFQGYLFGRPVPIEEF 809 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 103/266 (38%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-----CGRLMAVELLTVVTH 55 M +Q+ R + +++ E + +QP + C ++ E L H Sbjct: 630 MDQQIRDRRVLHQELSVAIKN------GELSLYFQPQASSGRTVDCSEIIGFEALARWHH 683 Query: 56 PLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 P+ +PP + S + + E I A + L +VN+ + Sbjct: 684 PVR--GFVPPSDFIPLAEESGMIVEMGEWILREACREAASWPKPLQVAVNLSPAQFVHGD 741 Query: 116 Q----QPKILRQIERLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 +L L E+ E + + + + G + +DDFG+G ++ Sbjct: 742 LVALVHSILLETGLSPGRLELEITEGVLIEDFDRGVALLRRLKALGVRVSMDDFGSGYSS 801 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L +D IKI R + L ++P+ + ++ L + ++ EGVETPE+ + Sbjct: 802 LSYLQAFPFDKIKIDRAFVMNLGRNPQSAAIIRAVIGLGHGMNMSIVAEGVETPEQLGFL 861 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ L +P PI+ + V Sbjct: 862 AEQGCDSVQGYLLGKPLPIDKYDGIV 887 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 99/259 (38%), Gaps = 22/259 (8%) Query: 8 RISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQRLPPD 66 RI +++ F L +QP G + +VE L HP LPP Sbjct: 436 RIEMENDLRRGIEKEEFVL------YYQPKVTLATGEVESVEALVRWNHP--EKGILPPH 487 Query: 67 RYFTEITVSHRMEVVKEQIDLLAQKADFFIEHG----LLASVNIDGPTLIALRQQPKILR 122 + + + + I A + + L +VN+ I +IL Sbjct: 488 YFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEILD 547 Query: 123 QIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSALSEV 173 +E L E+ E + + T + + + G + +DDFGTG ++FS L + Sbjct: 548 ALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKF 607 Query: 174 RYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFA 233 D +KI R + +P + ++ L + VI EGVE+ + ++ A Sbjct: 608 PLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDA 667 Query: 234 AQGWFLSRPAPIETLNTAV 252 QG+F SRP P L + Sbjct: 668 YQGFFNSRPLPPGELAERL 686 >UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYQ8_METML Length = 739 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 95/267 (35%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + +L +F L +Q + + E L HP Sbjct: 468 MQELVEVRATLESDLHNALATDQFELH------YQLQVNHENKPIGAEALIRWVHP--QR 519 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + V+ E +A + L+ +VNI Sbjct: 520 GMISPAHFIPVAEESALILNIGDWVLDEACRQIAVWSTNAKMCDLVLAVNISAQQFKQAH 579 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDSTFASMCEF------GPLWLDDFGTGMA 165 +++ I + L+ EL E + L + + L LDDFGTG + Sbjct: 580 FVDQVIAAIHKHGIDPSRLKLELTESVALDDITDVIAKKNLLRQKVGVTLSLDDFGTGFS 639 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D IKI + + + ++ + + VI EGVET + Sbjct: 640 SLSYLKRLPLDQIKIDQSFVRDITTDKSDAVMVKTIIDMAQNFSLNVIAEGVETEAQLAF 699 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ A QG+ S+P PIE + + Sbjct: 700 LKHHECKAYQGYLFSKPLPIEQFDALM 726 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 87/262 (33%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M QR + E+L +F L +QP GR+ E L HP Sbjct: 601 MQASAAQRFALQNEIREALLFNQFKL------YYQPQVDRTGRITGAEALIRWLHP--ER 652 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + ++ L + L S+N+ Sbjct: 653 GMISPMDFIPIAEESGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQQPD 712 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDSTF----ASMCEFG-PLWLDDFGTGMAN 166 ++L + R L EL E I ++ G LDDFGTG ++ Sbjct: 713 FVTQVLAAVTRTGANPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSS 772 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + + +KI + + P + ++ L VI EGVET + + Sbjct: 773 LSYLKRLPINELKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWL 832 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + QG++ +P E Sbjct: 833 EQEGCLHYQGYYFGKPVGAEEF 854 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 19/266 (7%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNPSQ 61 R++ R+S L R + E +QP GR++ VE L HP Sbjct: 822 REIDDRVSEYLHIEHGL--RSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHP--EQG 877 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTL---IA 113 + P R+ + + V++E + + +VN+ G + Sbjct: 878 MISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGLRP-MTMAVNLSGRQFSRSVI 936 Query: 114 LRQQPKILRQIERLPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFS 168 + WL+ E+ E + + ++ G + +DDFGTG ++ + Sbjct: 937 EAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLA 996 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 L D +KI R + + + ++ + + V+ EGVET +W ++ Sbjct: 997 YLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQ 1056 Query: 229 SPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ +SRP P L +L Sbjct: 1057 QGCDEVQGYLVSRPQPAAALGQWMLE 1082 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 24/259 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M +++++ IS ++L+ L +QPI R++ E L HP Sbjct: 562 MHQEILEAISLETDLRQALEAGELLLH------YQPIVDVKDSRIVGFEALVRWDHP--D 613 Query: 60 SQRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 +PP ++ + + V+ E L + L SVN+ + Sbjct: 614 RGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVK 673 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGM 164 + + + L+ E+ E + + + G + +DDFGTG Sbjct: 674 DGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVKIAIDDFGTGY 733 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L ++ D++KI R E + + ++ L VI EGVE P++ Sbjct: 734 SSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIAEGVECPDQLD 793 Query: 225 DVQNSPAFAAQGWFLSRPA 243 ++ + AQG+ SRP Sbjct: 794 RLRLADCDKAQGFMFSRPV 812 >UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7J2_BACCO Length = 559 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 104/267 (38%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M I ++++ + +QP Q G++ + E L +P Sbjct: 301 MDADFHNYILMEAHLRRAIEKNELAVH------YQPQVQLDTGKIKSFEALLRWRNPKFG 354 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + +PP ++ + + V+ +AQ G +VNI + Sbjct: 355 N--VPPLKFIPLAEETGLITSIGAWVIDHVCAQIAQWRQKGW-AGFRVAVNISPKQFLDP 411 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKD---STFASMCEFG-PLWLDDFGTGMAN 166 I R +E+ L E+ E K +S+ E G + +DDFGTG ++ Sbjct: 412 GLAGLIGRTLEKYKLPASVLEIEITEGAMEDKGHILKVLSSLKEMGLTISVDDFGTGYSS 471 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI + L S + + ++HL ++ V+ EGVE + + Sbjct: 472 LNYLKKFPVDILKIDQSFVRELENSQKDAAITKTIIHLAHQLGLEVVAEGVEEQGQVEFL 531 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 Q++ AQG+F SRP P E + + Sbjct: 532 QSARCQKAQGYFFSRPVPAEEVEKQLF 558 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + ++++ + L +QP Y G+L+ +E L HP Sbjct: 442 MNEKAQGLLWLETELRLAIEQEQLELH------YQPQYDLNTGQLVGMEALVRWNHP--E 493 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + + + V+ +A I + +VNI + Sbjct: 494 KGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGISP-IRMAVNISAVQFYRI 552 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + + ++ L E+ E + + T + G L +DDFGTG + Sbjct: 553 DLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYS 612 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI R + + + + ++ L V+ EGVET E+ Sbjct: 613 SLSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSF 672 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q QG+ +RP P + + + Sbjct: 673 LQRHACQYGQGYLFNRPLPAKDIERQL 699 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 17/260 (6%) Query: 7 QRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPD 66 Q+I N A +E ++ R+ + + +Q + G ++ E L HP+ + P Sbjct: 755 QKIINERAELE-IELRKAVDKKQLHLHYQIQLNSVGTPLSAEALIRWVHPVR--GLISPA 811 Query: 67 RYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKIL 121 + + + V+ L D L +VN+ + Sbjct: 812 HFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNFVALVK 871 Query: 122 RQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSALSE 172 ++R L+ EL E + + T ++ E G LDDFGTG ++ L Sbjct: 872 ETVQRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLDDFGTGYSSLQYLKR 931 Query: 173 VRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAF 232 + + +KI + L S R + ++ + VI EGVET E+ +Q+ Sbjct: 932 LPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQDIGCN 991 Query: 233 AAQGWFLSRPAPIETLNTAV 252 QG+ +P PIE L+ + Sbjct: 992 YYQGYLFGKPMPIEQLDAIL 1011 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 89/262 (33%), Gaps = 18/262 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q+ R + +LQ F L +QP+Y R+ E L HP Sbjct: 444 MDEQLQARRALELDLRRALQAGEFEL------FYQPLYHLGDERVTGCEALLRWRHP--E 495 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + E + A + +VN+ Sbjct: 496 RGMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWPEHVRLAVNLSPAQFRDRGLVRT 555 Query: 120 ILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSAL 170 ++ + L E+ E + L + G + +DDFGTG ++ S L Sbjct: 556 VVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYL 615 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI + + + + +L L EGVET + ++ Sbjct: 616 RSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQG 675 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG+F+SRPAP + + Sbjct: 676 CAEIQGYFISRPAPASEIAKML 697 >UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alphaproteobacteria RepID=B7KRA3_METC4 Length = 954 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 18/265 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M ++ +R + +++ F L +QPI + R+ + E L HP Sbjct: 693 MDVELRKRRALESDLKKAVGNGEFEL------VFQPIVKLDRQRIASCEALLRWRHP--E 744 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + + E + A + +VN+ Sbjct: 745 RGYVSPADFIPLAEETGTIGEIGEWVLRKACSEAATWPSNIRVAVNVSAAQFKNAAVVRA 804 Query: 120 ILRQIER--LPW--LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 ++ + LP L E+ E + L +T ++ G + +DDFGTG ++ S L Sbjct: 805 VMDALAASGLPAHRLELEITESVLLNDSVTTLATLHTLKRLGVRVAMDDFGTGFSSLSYL 864 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI + L R + ++ L EG+ET + ++ Sbjct: 865 QSFPFDKIKIDQSFVRNLAAPGNSRLIVRSVVGLGRSLGITTTAEGIETEAQLEQLRLEG 924 Query: 231 AFAAQGWFLSRPAPIETLNTAVLAL 255 QG+ SRP P T+ V AL Sbjct: 925 CDEGQGYLFSRPVPSATIRELVTAL 949 >UniRef50_B5JXV5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXV5_9GAMM Length = 646 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 20/266 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M ++ + RI + L+ R F+ + + PI G ++ E L HP Sbjct: 372 MHQEAVNRIELENSIRHGLERREFFNR------YHPIIDVESGLTVSAEALVRWNHPERG 425 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L P+ +P + + + K DL K F GL +VN Sbjct: 426 ELAPNHFIPLAEEIGLVKPLDQQVLDKALADLCVWKKHFPEHSGLTVNVNHSAQHFHGRP 485 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 IL +E L+ EL E L D + F + + G L +DDFGTG ++ Sbjct: 486 SLEVILNSLEAHSLRGRDLKLELTESSILKNDLVASALFGELRKMGVHLCMDDFGTGFSS 545 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ +D +KI + S E R + ++ + N GV EGVET E+ + Sbjct: 546 LSYLHKLSFDMLKIDMSFVAEMLYSDEARKIVHSIIEMGNHLGLGVTAEGVETQEQLDIL 605 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ AQG+ S+P E + + Sbjct: 606 KSMGCRYAQGYLFSKPLLAEEIPDFI 631 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 107/266 (40%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R+ + +++ +L + F L +QP + + G+++ +E L HP Sbjct: 600 MHREALNQLTLEADLRRALIKEEFLL------YYQPQVEISTGKIVGLEALIRWQHPT-- 651 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLA--QKADFFIE--HGLLASVNIDGPTLIALR 115 +PPD++ + + + + A Q + E + +VN+ + Sbjct: 652 LGFVPPDQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQ 711 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 IL+ +E +L E+ E + T + E G + +DDFGTG ++ Sbjct: 712 LINIILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSS 771 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + +KI R + ++ + ++ L V+ EGVETP++ + Sbjct: 772 LNVLKHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFL 831 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ AQG++ P P + + Sbjct: 832 RSIHCDLAQGYYFCPPVPAIEIAKLL 857 >UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein (Fragment) n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHA2_9CELL Length = 721 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 24/270 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + + R+ A + + E F L +QPI + R ++ +E L HP Sbjct: 449 MHARAMARLQMESALDQGIAEDEFEL------FYQPIVRMDTRQIVGMEALIRWRHP--Q 500 Query: 60 SQRLPPDRYFTEITVSH-----RMEVVKEQIDLLAQKADFFIE-HGLLASVNIDGPTLIA 113 + P+ + + + E + + D SVN+ Sbjct: 501 RGLVAPNDFLPVAEATGHTRPIGQWTIGEACRQIREWLDVVPGFEACTVSVNLSNRQFWD 560 Query: 114 LRQQPKILRQIERL----PWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGM 164 +P + ++R + FE+ E + + + E G L +DDFGTG Sbjct: 561 PDLRPTLRSALDRYAVPTSSIVFEVTEGVIMDNQDVAVSFLHQLREEGVELHVDDFGTGH 620 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S+L E+ +KI R ++ SP L ++ + R+ VI EG+ET EE Sbjct: 621 SSLSSLHELPVGALKIDRSFVQRMQTSPRSHELVGLMVTMGTRFGLDVIAEGIETEEEAA 680 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + AQG+ SRP P +LA Sbjct: 681 ALSRLGCPYAQGYLFSRPLPATEATALLLA 710 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 108/269 (40%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + +QR+S + + ++ L +QP G+ +E L HP + Sbjct: 971 LNSRAMQRLSIETSLRKGIERNELLLH------YQPKLDLHTGKPYGLEALLRWQHPDH- 1023 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + +V++ L++ + + H S+N+ Sbjct: 1024 -GMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHIC-LSLNVSAVQFRDR 1081 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFGPL-WLDDFGTGMA 165 R +++ + + EL E + + ++ + G L +DDFGTG + Sbjct: 1082 RFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYS 1141 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + + P + ++ L + VI EGVE +E+R Sbjct: 1142 SLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRA 1201 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ + QG+F++RP E + +LA Sbjct: 1202 LRAAGCDGIQGYFVARPLTPEQVPEWLLA 1230 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 92/259 (35%), Gaps = 24/259 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++ + +L+ + F + +QPI G L E L HP Sbjct: 444 MHARALELLRLENDLRRALERQEFEV------YYQPITSLVTGMLTGFEALVRWRHP--E 495 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 + P + + + V+ E L F L SVN+ G + Sbjct: 496 LGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHTQFPTPEPLKMSVNLSGKQIKE 555 Query: 114 LRQQPKILRQIERL----PWLRFELVEHIRLPKDSTFASM-----CEFGPLWLDDFGTGM 164 +I + +L+ E+ E I + T M L +DDFGTG Sbjct: 556 PDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTKMLLQLRARNIQLSVDDFGTGY 615 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + +KI R + + ++ L + VI EGVET E+ Sbjct: 616 SSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIITLAHSLRMDVIAEGVETLEQLT 675 Query: 225 DVQNSPAFAAQGWFLSRPA 243 +++ QG+ S+P Sbjct: 676 ELKLLNCEQGQGYLFSKPL 694 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 102/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + A +++ + + + +QP G ++ E L HP Sbjct: 596 MQAYSTRYLQVLNALRQAIAQEQLHVH------YQPQISLISGDVIGAEALLRWHHP--E 647 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V++ + + ++ L+ +VN+ Sbjct: 648 LGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDK-LIIAVNLSAVQFRHA 706 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 +++ ++ +L EL E + + + S+ E G + +DDFGTG + Sbjct: 707 GLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYS 766 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + +KI + + E + + S ++ + I EGVET E+ Sbjct: 767 SLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAF 826 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ AQG+ S+P P T +L Sbjct: 827 LREEGCHEAQGYHYSKPLPAADFETFILG 855 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + + ++ +L+ F L +QP + GR++ E L HP Sbjct: 670 LNARAREILAIESQLRFALERDEFVLH------YQPQVEMESGRIVGAEALIRWNHPS-- 721 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 L P R+ + V+ E L + + L ++N+ Sbjct: 722 LGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPE-LTLAINLSALQFRQP 780 Query: 115 RQQPKILRQIER--LPW--LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 ++ + +E LP L E+ E I + T +M G L +DDFGTG + Sbjct: 781 DLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYS 840 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI R + Q + + ++++ V+ EGVET E+W+ Sbjct: 841 SLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQF 900 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ +++P P + + Sbjct: 901 LEQEGCDFVQGYLIAKPLPADDFAELL 927 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 103/269 (38%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + ++R++ + +L+ R F L +QP+ GR++ VE L P Sbjct: 407 LNHRAMERLTLETSLRRALERREFLLH------YQPLLGIGSGRIVGVEALLRWDSP--E 458 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + + V++ + L + L SVN+ Sbjct: 459 LGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTE-LCVSVNVSARQFRHD 517 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + + + +L EL E + + + T + + G L +DDFGTG + Sbjct: 518 GFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYS 577 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + + + ++ L + V+ EGVET E+ Sbjct: 578 SLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAF 637 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ ++RP P L + A Sbjct: 638 LAALRCDVVQGYHIARPLPPRNLLEFLEA 666 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 99/262 (37%), Gaps = 22/262 (8%) Query: 6 IQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP----LNPS 60 + RI ++ + F L +QP + G+L+ +E L HP ++P Sbjct: 454 LARILLESGLRNAVDRQEFLL------FYQPQMELATGKLIGMEALIRWQHPEQGMVSPG 507 Query: 61 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI 120 + +P T + + +KE D L SVN+ G + Sbjct: 508 EFIPLAEE-TGLVIPMGQWALKEACRQSKVWMD-QTGVPLRISVNLSGIQFRLPDFTEMV 565 Query: 121 LRQIER--LP--WLRFELVEHIRLPK----DSTFASMCEFGPL-WLDDFGTGMANFSALS 171 +R + LP L EL E I + + FG L +DDFGTG ++ S L Sbjct: 566 MRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYLK 625 Query: 172 EVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPA 231 + D +KI + + PE + ++L + VI EGVE E+ + Sbjct: 626 KFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESC 685 Query: 232 FAAQGWFLSRPAPIETLNTAVL 253 QG+F RP + +L Sbjct: 686 DEIQGYFYGRPLSGDKFEMFML 707 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 99/262 (37%), Gaps = 24/262 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIY-QTCGRLMAVELLTVVTHPLNP 59 M + R+ ++L+ + LQ +QPI +++ E L HP + Sbjct: 605 MHTSALVRLQLETDLRQALERQELRLQ------YQPILCLNTDQIVGFEALVRWQHPRD- 657 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEH-GLLASVNIDGPTLIA 113 + P + T + + V++E + F + L+ SVN+ L Sbjct: 658 -GLIAPGHFITVAEETGLIVPIGEWVLQEACRQMQCWHTQFGQVLPLMVSVNLSSKQLSQ 716 Query: 114 LRQQPKILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEF-GPLWLDDFGTGM 164 ++ R + R L+ E+ E + L T + E L +DDFGTG Sbjct: 717 PDLLQQVDRMLAETGLRPQQLKLEITESMILDNTEVARQTLLKLKERQIQLSMDDFGTGY 776 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + L + D +KI R + E R L ++ + + VI EG+ET + Sbjct: 777 SSLNYLHRLPIDLLKIDRSFIHEMDSGEESRELVRAIISIAHSLKMQVIAEGIETRSQLE 836 Query: 225 DVQNSPAFAAQGWFLSRPAPIE 246 + QG+ S P E Sbjct: 837 QLHELGCEFGQGYLFSTPLDPE 858 >UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2I6_METRJ Length = 819 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 100/266 (37%), Gaps = 26/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPL-- 57 M + +R ++L + L +QP G L+ E L THP+ Sbjct: 545 MDEEAEERRVLERDLRQALDDNTLGLH------YQPQVDGHTGALVGFEALLRWTHPVRG 598 Query: 58 --NPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +P+ +P T + V+ V++E AQ A L +VN+ Sbjct: 599 SVSPNLFVPLAEE-TGLIVALGDWVLREACREAAQWAQ-----PLKVAVNLSPRQFQKPD 652 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 +L + L E+ E I + + + +G + +DDFGTG A+ Sbjct: 653 LPETVLAILAETGLSPDRLELEVTESIIINDMARAVGILRRLKSYGIRISMDDFGTGYAS 712 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L +D +KI R L P+ + +L L GV+ EGVET + + + Sbjct: 713 LATLQAFPFDKLKIDRSFVAQLGTGPQAAVIVRAVLSLGRSLGMGVVAEGVETHAQMKFL 772 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ RP PI AV Sbjct: 773 TEEACGEMQGYLFGRPRPITDYAAAV 798 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 99/267 (37%), Gaps = 24/267 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQ 61 R QR+ +L+ L +QP + R++ E L P + Sbjct: 837 RAAEQRLDLEVRLQRALRLNELCL------YFQPQIDISSNRIIGAEALVRWQDPAH--G 888 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P ++ + + V+ E + + + +VNI Sbjct: 889 LISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLP-AINLAVNISPVQFRNSNI 947 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANF 167 + +++ + L EL E + ++ +++ ++G L +DDFGTG ++ Sbjct: 948 LESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYSSL 1007 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L D +KI + + + + + ++ + + V+ EGVET E+ ++ Sbjct: 1008 AYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTFLK 1067 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ +S P P + + A Sbjct: 1068 EQGCDCYQGYLMSPPVPADQFEQLLRA 1094 >UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5H0_9RHIZ Length = 684 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 83/262 (31%), Gaps = 18/262 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +V R S +L F + +QP G E L HP Sbjct: 421 MADEVQLRRSLEIDLRRALNREEFEV------YYQPQVDAKSGDYSGAEALIRWRHP--Q 472 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 L P + + + + A + L +VN+ ++ R Sbjct: 473 RGMLSPVVFIPLAEELGLIGPIGNWVLRQACRDAVTWPSHLSVAVNLSPAQMMDRRLPKS 532 Query: 120 ILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 + + L E+ E + D + + G + LDDFGTG ++ S L Sbjct: 533 VKSILNETGLDPARLELEITETSLIGNDVQALAVLNELRAMGIAISLDDFGTGYSSLSYL 592 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 + IKI R + + + + L + EG+E E+W + Sbjct: 593 HRFPINRIKIDRSFIDRIPTDVDSAAIVQAIAKLGGSLGMKITAEGIENEEQWSFSKTEG 652 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG+ S+P P + Sbjct: 653 CDHLQGYLFSKPIPGSEIGALF 674 >UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Comamonadaceae RepID=A9BNX4_DELAS Length = 916 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M ++ QR+ ++L + +F L +QP + G ++ E L HP Sbjct: 637 MQVEIHQRVRMEGDLRQALAQSQFELH------YQPQFTLAGEVIGAEALLRWRHP--ER 688 Query: 61 QRLPPDRYFTEITVSH-----RMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + S M V++ + LA L +VN+ Sbjct: 689 GLVPPGMFIAVAEESEIIVPLGMWVIRTACEQLAIWQKDARLRHLQVAVNVSARQFRHQN 748 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 +++ Q+ L+ EL E + + + M + +DDFGTG ++ Sbjct: 749 FASQVIEQVRNAGIAPHLLKLELTESLVIENVQESIDKMKQLRSHGVCFSMDDFGTGHSS 808 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L+++ + +KI + L + ++ + VI EGVET E+ + Sbjct: 809 LTYLTQLPLNQLKIDQSFVRHLGLRHTDDVIVQTIIGMARNLNLDVIAEGVETLEQRALL 868 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ S P PI + Sbjct: 869 AHYGCEYFQGYLFSPPVPIRAFEQLL 894 >UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XC86_NAKMY Length = 1039 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 98/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M V+QR+ ++ E++F + +QPI G+L E L HP+ Sbjct: 765 MHESVLQRLIMDAELRLAIDEQQFSVH------YQPIISLISGQLRGFEALLRWQHPVRG 818 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIE-HGLLASVNIDGPTLIA 113 +PP + S + V++E A+ F L SVN+ + Sbjct: 819 D--IPPSSFIPLAESSGLIVPLGGWVLREACSQAARWRRLFPPTRSLTMSVNLSVRQIQE 876 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKDSTFASMCEF----GPLWLDDFGTGMA 165 +L + L+ E+ E ++ + E L +DDFGTG + Sbjct: 877 PTLVATVLEALTDAGLEPGDLQLEITESTLDQRNLILGVLHELHDKGIKLAIDDFGTGYS 936 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI R L L + + + + EG+E+ ++ Sbjct: 937 SLSRLHTLPVDRVKIDRSFI-ELLAGSNPAPLVAATVAMAHSLGMQTTAEGIESADQLPM 995 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG++L RP E + Sbjct: 996 LRMYGCDDGQGYYLGRPMSAEAATALI 1022 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M +V++ +++ F L +QP G+++ E L HP Sbjct: 487 MNERVMEIAELESKLRRAVERNEFVL------YYQPKIDIRTGQVVGAEALIRWQHPSW- 539 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PDR+ S + V++E + + + +VN+ L Sbjct: 540 -GLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLAR-IPVAVNLSTVQLRQH 597 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 ++ + +L E+ E + + ++ + G L LDDFGTG + Sbjct: 598 NFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYS 657 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + +KI + + P+ T+ + ++ + + VI EGVE + Sbjct: 658 SLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEF 717 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ SRP P + + Sbjct: 718 LKKEGCDQMQGFIASRPVPADEFALLL 744 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 106/266 (39%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + R++ +++ L +QP T G+++ E L HP Sbjct: 489 MEEAGLDRLTLENDLRKAMDNDELVL------FYQPQVDTRSGKVVGAEALLRWMHP--E 540 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLI-- 112 +PP ++ + V++E + A + +VN+ Sbjct: 541 QGLIPPFKFIPLAEEMGLIGEMGDWVIREACKQVQTFAKKGVSLP-KVAVNVSALQFTPS 599 Query: 113 ALRQQPKILRQIERLP-WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 R+ IL ++ P L EL E + + + A + + G L +DDFGTG ++ Sbjct: 600 FTRRVKSILDELAVDPATLELELTEGVVMGDTNASVQALAELKDLGVSLSIDDFGTGYSS 659 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S LS D +KI R + S +G +L ++ + ++ EGVET E++ + Sbjct: 660 LSYLSRFPLDELKIDRSFVIEANNSEQGASLVRAIIAMAQSLGLELVAEGVETDEQYEFM 719 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + A QG+ S+P P E L + Sbjct: 720 TTAGAHVIQGYMFSQPVPAEKLEPLL 745 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 101/268 (37%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTH---- 55 M +R+S A ++L F + +QP G ++ +E L Sbjct: 586 MDADAARRLSIESALRDALARDEFCVH------YQPQVSLDSGHMIGMEALLRWNSALLG 639 Query: 56 PLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 P++P + +P T + + V++ D + L +VN+ Sbjct: 640 PISPVEFIPIAEE-TGLIMQIGDWVLRTACHQTKAWLDLGLLP-LHVAVNLSPRQFRQAD 697 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPK-DSTFA---SMCEFG-PLWLDDFGTGMAN 166 ++ + L E+ E + D A + G L LDDFGTG ++ Sbjct: 698 LPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSS 757 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + +S +D IKI + + +P + S + + V+ EGVET + + Sbjct: 758 LAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFL 817 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ A QG+ SRP P E +L+ Sbjct: 818 RSRRCDAIQGYLFSRPLPPEEFAPLLLS 845 >UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F6T4_ACIAD Length = 676 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + VI R S ++L F L +QPI +++ E L HP+ Sbjct: 423 MEQNVISRASLLSDLRQALIRDEFEL------YYQPIVDQHKKIIGYEALLRWIHPVR-- 474 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + S + V+ L Q + SVNI Sbjct: 475 GLILPGEFIEQAEKSDLIHLIGNRVLMMACQQLYQWSQNTDSAHWTLSVNISVQQFRKSD 534 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMAN 166 + I++ I+ LR EL E + S+ M + + +DDFGTG ++ Sbjct: 535 FEENIIQIIQDSKANPYRLRLELTESMFYTDMQSSIEKMKKLIEIGVRFSMDDFGTGYSS 594 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI R + + + + +++L + V+ EGVET E++ + Sbjct: 595 LNYLKLLPLDQLKIDRSFVKNMVDNSRDIAIVNTIINLAHILDLNVVAEGVETEEQFICL 654 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + F QG+ RP PI+++ Sbjct: 655 TQNQCFTFQGYLFGRPLPIDSI 676 >UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KBF3_PSEF5 Length = 641 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 102/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNP 59 M + ++ +++L+ R F L +QP I+ G ++ E L P Sbjct: 370 MTHRAREQQYLESGILQALERREFHLH------YQPKIHLASGNVVGAEALIRWQRP--Q 421 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P+ + S + V+ E + + + S+N+ Sbjct: 422 QGWISPELFIPVAEDSGLITRISQWVLGEATRQCRAWQNAGLPP-VPLSINLSAADFRQP 480 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + ++ + WL E+ E + L +T ++ G L +DDFGTG + Sbjct: 481 QLLQQLRDALSDNALDPAWLELEITEGVLLQNVEVTLATLLAIKALGVRLAVDDFGTGYS 540 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI + L + L S +++L VI EGVET ++ Sbjct: 541 SLSYLRKFPVDVLKIDQSFIHGLSHEHKDAVLVSAIINLGRSLNLKVIAEGVETHQQLTF 600 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q AQG++ S+ P E + Sbjct: 601 LQQQGCEEAQGYYFSKALPAEDFARLL 627 >UniRef50_A1K7N7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7N7_AZOSB Length = 567 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 109/269 (40%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + ++R+ +L++ +F +QPI + RLM E L HP Sbjct: 299 MHEEALRRLDLELDLRRALEKHQFEA------YYQPIVRLKDNRLMGFEALVRWNHP--D 350 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 + P + + + +++E + + ++ L SVN+ L+ Sbjct: 351 RGLISPAEFIPLAEDNGLIVHIGRWMLQEACAQMRRWQLEYPRRPALTVSVNLSARQLLH 410 Query: 114 LRQQPKILRQIE----RLPWLRFELVEHIRLPKDSTFASMCEFGP-----LWLDDFGTGM 164 + P+I R + L+ E+ E + + + E L LDDFGTG Sbjct: 411 PQLLPEIRRTLRDTGLSARHLKLEITESVMMEDAQRAIELLEALKRTRLSLMLDDFGTGY 470 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + D +K+ R + + + + R+ +++L ++ R V+ EGVE PE+ Sbjct: 471 SSLSYLHRLPIDALKVDRSFVMHMHERADDRSFVETIVNLAHKLGRAVVCEGVELPEQEA 530 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ QG+ SRP ++ Sbjct: 531 LLRELGVEYGQGYLYSRPVTASQAEMLII 559 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++ +R + E E++ L +QP G ++ E L HP Sbjct: 604 MTEEISERFALTEELREAISREELEL------YFQPQVDIRTGSILGAEALLRWNHP--Q 655 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLI-- 112 +PPDR+ S +M V+++ +A + I +VNI + Sbjct: 656 RGMIPPDRFIPIAESSGQMIKIGAWVLEQVCAKVAGWKERGIVAP-KIAVNISNQQMNRE 714 Query: 113 ALRQQPKILRQIERLP-WLRFELVEHIRLPKDSTFA----SMCEFGP-LWLDDFGTGMAN 166 + Q ++L + P L E+ E + A S+ G + +DDFGTG ++ Sbjct: 715 LVEQITELLASSKCDPACLELEITESCLMENPEQMAHELSSLKALGVGIAIDDFGTGYSS 774 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ + +K+ R L+ + ++ + VI EG+ET E+ + Sbjct: 775 LSYLKQLPINKLKVDRSFVSDLQDDENDLAITRAIVAMGQSMNLNVIAEGIETQEQIDLL 834 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 F QG+F S+P P E + Sbjct: 835 LKLECFEGQGYFYSKPLPEEQFLAYL 860 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 92/262 (35%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V + LQ F L +Q + GR E L H + Sbjct: 633 MQAAVTTHAELAKEIRLGLQRHEFVLH------YQVQIDSQGRCTGAEALVRWNHRVR-- 684 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ L + + + +VN+ L Sbjct: 685 GLVSPAHFIPLAEETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQPE 744 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDSTF----ASMCEFG-PLWLDDFGTGMAN 166 + ++R L+ EL E + + ++ E G LDDFGTG ++ Sbjct: 745 FVASVREALQRSGAPAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSS 804 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI + + P + ++ L + VI EGVET E+ + Sbjct: 805 LSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDAL 864 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 A QG++ RPAP + L Sbjct: 865 AAMQCDAFQGYYFGRPAPADAL 886 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 95/263 (36%), Gaps = 22/263 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R + E ++L+ E +QP + G L+ E L HP Sbjct: 976 MQALITKRAAMEEDLRQALRRD------EMRLYYQPQVDSQGSLLGAEALVRWEHP--QQ 1027 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L P + + + V++ L A GL+ SVN+ L Sbjct: 1028 GLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHD 1087 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDSTF----ASMCEFGP-LWLDDFGTGMAN 166 ++ ++ L+ EL E + + G +DDFGTG ++ Sbjct: 1088 FIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSS 1147 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + +KI R + ++ ++ L + V+ EGVE+ E+ + + Sbjct: 1148 LAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFL 1207 Query: 227 QNSPAFAAQGWFLSRPAPIETLN 249 + QG+ RP P E L Sbjct: 1208 EKHGCLEYQGYLFGRPQPAEQLE 1230 >UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q2Y9Y0_NITMU Length = 756 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 103/289 (35%), Gaps = 44/289 (15%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + I+++ A ++L F L +QP G + +E L P + Sbjct: 456 MNIRAIEKLDQENALRKALDREEFVLH------YQPKVDLSNGWVTGMEALLRWKRPEH- 508 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + + V++ +A+ I + SVN+ G Sbjct: 509 -GVVEPLEFIPALEQTGLITRVGAWVIESVCRQIAEWRHAGIGE-IPVSVNVSGRQFSRS 566 Query: 115 RQQPKILRQIERLP------------------------WLRFELVEHIRLPKD----STF 146 ++R + L EL E + S Sbjct: 567 TLNQDVIRATQANGIQPALLEFELQTERALRENSIDSDLLELELTESSLMMHAKKTVSIL 626 Query: 147 ASMCEFG-PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLM 205 + G + +DDFGTG ++ + + D +KI R + + + + ++ + Sbjct: 627 QRLKALGIQISIDDFGTGYSSLAYVKRFPIDVLKIDRSFIQEITTNSADAAITTAIIDMA 686 Query: 206 NRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + V+ EGVET E++ ++ QG++LS P P ++ +L+ Sbjct: 687 HSLHVRVVAEGVETAEQFDFLKGRGCDEVQGFYLSPPLPANEISQLLLS 735 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 100/265 (37%), Gaps = 22/265 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M ++QR + E ES++ F L +QP GR+ E+L HPL Sbjct: 545 MQAMLVQRAALEEDMRESMRLSHFLLH------YQPQVVGSGRITGAEVLLRWPHPLR-- 596 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + ++ + V++ LA + L SVN+ Sbjct: 597 GLVPPAEFIPLAEDTNLITALGHWVLETACKTLADWSAQDDMKHLSVSVNVSARQFRQPH 656 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 +++ +ER L+ EL E + + + A M LDDFGTG ++ Sbjct: 657 FVAEVMSILERTGADPHLLKLELTESLLVEDVEDIVAKMSALKSRGVGFSLDDFGTGYSS 716 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI + + P + ++ L + VI EGVE + + Sbjct: 717 LAHLKRLPLDQLKIDQSFVRDILTDPNDLAIGRMVVALADSLGLTVIAEGVELAAQRELL 776 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTA 251 A QG+ SRP P E Sbjct: 777 AQIGCDAYQGYLFSRPLPREPFEAC 801 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 100/268 (37%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++ QR++ +L+ER F + +QP G + +E L P Sbjct: 690 MSERIAQRLTLESDMRRALKEREFTV------YFQPKVDLASGEVSGLEALVRWVKP--D 741 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIE----HGLLASVNIDGPTLIALR 115 + P+ + + + + E + + KA ++ L +VN+ Sbjct: 742 GIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVAVNLSPIQFGQED 801 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 ++ +ER L E+ E + + + E G + +DDFGTG ++ Sbjct: 802 LVEMVVANLERNGLPASRLELEITESTLMTDVQSSVAQLNRLVELGITISIDDFGTGYSS 861 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L +KI R + + ++ + GV+ EGVET E+ + Sbjct: 862 LYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVAEGVETKEQLDLL 921 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG++ SRP P+E + +L Sbjct: 922 ATFGCATVQGYYYSRPLPLEKIIEFLLG 949 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 104/271 (38%), Gaps = 25/271 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + +R+ +L + E A +QP R++ E+L HP Sbjct: 869 MQKAASERLRMENDLRLAL------ARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLG 922 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQ-KADFFIE-HGLLASVNIDGPTLI 112 Q PP ++ + S + ++ E D A+ D I+ VNI Sbjct: 923 QQ--PPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFR 980 Query: 113 ALRQQPKILRQIE--RLP--WLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTG 163 ++LR ++ RLP L E+ E I + + T + MCE +DDFGTG Sbjct: 981 QNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTG 1040 Query: 164 MANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEW 223 ++ + L + D +KI + P + ++ + VI EGVE E+ Sbjct: 1041 YSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQL 1100 Query: 224 RDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ SRP P+ +L Sbjct: 1101 AFLERLGCHLYQGYLHSRPLPLPEFRQMLLE 1131 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 101/262 (38%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M + + + A +L +F L +QP GR++ E L THP Sbjct: 734 MQARSTRTLLLANALRHALDRGQFSLH------YQPQVSLADGRVVGAEALLRWTHPEFG 787 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++P + +P + V++E + + D + L+ +VN+ Sbjct: 788 PVSPGEFVPIAE-SNGLIAQIGEWVLREAVAQSRRWLDEGLPP-LVMAVNLSAAQFRNPN 845 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + + IE + EL E + + ++ G + +DDFGTG ++ Sbjct: 846 LPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSS 905 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + +KI + + P+ + + S ++HL + EGVET ++ + Sbjct: 906 LGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFL 965 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + QG++ SRP P E Sbjct: 966 RQQGCDTVQGYYFSRPLPAEAF 987 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ + R+ +L+ R F+++ +QPI ++A E L HP Sbjct: 467 MNQKALMRMETEAGLRNALERREFYVE------FQPIMNAADSTVVAAEALVRWNHPTR- 519 Query: 60 SQRLPPDRYFTEITVSH-----RMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 R+PPD++ + V++ + +D + + SVN+ + Sbjct: 520 -GRIPPDQFIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPL-IRFSVNVSSRQIERQ 577 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + + L EL E + T + E+G +DDFGTG + Sbjct: 578 DFAEIVRNALRESGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFGTGYS 637 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + + D+IKI R + + + ++ + R I EGVET E+ R Sbjct: 638 SLGYIKTLPIDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRF 697 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +Q QG++ RP E L + A Sbjct: 698 LQERGCEEIQGYYFHRPLSAEALEELLRA 726 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + + A +L+ +F + +QP R++ E L THP Sbjct: 783 MQARSARTLQIDNALRRALERNQF------SLVYQPQLSLNTNRIVGFEALIRWTHPQFG 836 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PPD + + ++ V+K + L D ++ + SVN+ Sbjct: 837 NT--PPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLK-DVTISVNLSAVQFRHP 893 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 R ++ +E L+ EL E + + + + + G + +DDFGTG + Sbjct: 894 RLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYS 953 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L +KI R L E + S ++ L + + EGVET E+ Sbjct: 954 SLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEF 1013 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ QG++LSRP + + + + Sbjct: 1014 LRSRGCTEIQGYYLSRPLQADAVFSFI 1040 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 22/259 (8%) Query: 4 QVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNPSQR 62 + + + A +++++++ L+ +QP Y ++ VE L HP Sbjct: 563 KSVSHVRIQSALHQAIEKQQLRLE------FQPQYNLEQHAIVGVETLLRWQHP--EFGL 614 Query: 63 LPPDRYFTEITVSHRMEVVKEQIDLLA-QKADFFIEHGL---LASVNIDGPTLIALRQQP 118 +PP + + ++ + E + L A Q+ + ++E G+ +VN+ L Sbjct: 615 VPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNVSALQLQQSNFIQ 674 Query: 119 KILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSA 169 ++ + + + L E+ E L ++ + E G + LDDFGTG ++ S Sbjct: 675 RLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDDFGTGYSSLSY 734 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L + + +KI R + + + + + ++ + V+ EG+ET E+ + Sbjct: 735 LKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQEQADYLFEK 794 Query: 230 PAFAAQGWFLSRPAPIETL 248 QG+ SRP E L Sbjct: 795 GCVYGQGYLFSRPVSAEKL 813 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M QV + + E+L + + L +QP +++ VE L HP Sbjct: 406 MQAQVESFLEIEKGLHEALHKGQLEL------YYQPQVNAQQQIIGVEALIRWNHP--EK 457 Query: 61 QRLPPDRYFTEITVSHRMEVVKEQI--DLLAQKADFFIEHGLL-----ASVNIDGPTLIA 113 LPP + + ++ + + I Q A + E L ++NI Sbjct: 458 GVLPPGVFMPIAEETGQILQIGDWIIEQACFQYAQWKKEQVLPETFHRLAINISPLQFSK 517 Query: 114 LRQQPKILRQIERL----PWLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGM 164 I +++ + E+ E + L +S M E + +DDFGTG Sbjct: 518 NAFVEHITHALKQANITGEHIELEITESLLLENVESAINKMAELKELDLKISIDDFGTGY 577 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ L + D +KI R L + + S ++ + R VI EGVET EE+ Sbjct: 578 SSLRYLKHLAVDVLKIDRSFVTQLHLDQSDQAIVSTIIMIAERLSLEVIAEGVETEEEFN 637 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ +P P+E + + Sbjct: 638 TLVELGCEQFQGYLFGKPLPVEMITQKL 665 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 25/262 (9%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQ 61 R +R+S + +L+ F L +QP+ + GR++ E+L P Sbjct: 622 RAANERLSMETSLRRALRCEEFVLH------YQPLVELASGRVLGAEVLVRWQPP--GEA 673 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 +PP R+ + + V+ E D + LL +VN+ + Sbjct: 674 LVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLP--LLLAVNLSPRQFLRHDL 731 Query: 117 QPKILRQIER--LP--WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANF 167 ++ + ++ LP L EL E + + T ++ G L +DDFGTG ++ Sbjct: 732 VGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSL 791 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L D +KI R L + + + ++ ++ + EGVETP++ ++ Sbjct: 792 AYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLR 851 Query: 228 NSPAFAAQGWFLSRPAPIETLN 249 + QG+ S P P E Sbjct: 852 QLGCDSGQGYLFSPPLPAEAFE 873 >UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M8T6_METRJ Length = 776 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 100/264 (37%), Gaps = 18/264 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M R + +L L +QPI + G +++ E L HP++ Sbjct: 512 MEAATRARHALESDLRAALTNGELELH------YQPIVDSSTGAIVSCEALLRWHHPVS- 564 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 +PP + + + + + A + + +VN+ + Sbjct: 565 -GYIPPSDFIPVAEDTGLIVQLGNWVLNEACREARKWPSTVSVAVNMSPRQFGDPQLAFH 623 Query: 120 ILRQIER--LPW--LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 ++ + R LP L E+ E + L T + + G L +DDFGTG ++ S+L Sbjct: 624 VIGALNRSGLPAHRLELEITESVTLGATHKIVETINKLRQLGIRLSIDDFGTGYSSLSSL 683 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D +KI R L + E + ++ + ++VEGVET + ++ Sbjct: 684 RNFAFDKLKIDRSFVSDLDRKAESTAIIRAIVGMGRSIGMAIVVEGVETETQLSILRTEG 743 Query: 231 AFAAQGWFLSRPAPIETLNTAVLA 254 QG+ SRP + T + A Sbjct: 744 CDLIQGYVFSRPVAAPQIRTMLAA 767 >UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5L4_9RHOB Length = 854 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 100/269 (37%), Gaps = 22/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M R V + +S ++ F + QP G ++ E+L HP+ Sbjct: 587 MQRVVREEVSLDADLRTAVDRGEFE------FHLQPQINRFGTVVGAEVLLRWPHPVR-- 638 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + V+ +L+ A + + S+N+ L + Sbjct: 639 GLVSPGVFIPIAEKSGLIVPLGNWVLDCAAKVLSNWAAKELFSDINLSINVSANQLHSED 698 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 +L IER L+ E+ E + + D M LDDFGTG ++ Sbjct: 699 FVETVLGAIERHGARPRRLKLEITESLLVNNLDDAIRKMTALQQHEILFSLDDFGTGYSS 758 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D +KI R L Q+ + ++ L VI EGVET E+ + Sbjct: 759 LSYLKQLPLDQLKIDRSFVSDLPQNKNDAAIAEMIVALGRTLGLHVIAEGVETEEQKGFL 818 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 + QG+ P P++ V AL Sbjct: 819 EGIGCDQFQGYLFGVPMPLDQFEEFVSAL 847 >UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Methylobacterium RepID=B1ZFY0_METPB Length = 833 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 96/261 (36%), Gaps = 18/261 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q+ R ++ L +QPI G + E L HP Sbjct: 558 MDEQLQARRRIEHELSGAIPRGELQL------YYQPIVNGRTGEIETFEALIRWHHP--E 609 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 +PP + + ++ + + A A H SVN+ Sbjct: 610 RGCVPPADFIPLAEQTDQIGRIGAWVLDTACAAAAAWPHPWRVSVNVSPKQFRQPGFAAG 669 Query: 120 ILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 + + R L E+ E + + ++ G L LDDFGTG ++ S L Sbjct: 670 VAAVLGRYGLPPGRLVLEITEGVFIQDATMAVEVLTALRTLGVRLALDDFGTGYSSLSYL 729 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 ++D IK+ + L + + T+ + HL + V VEGVET E+ ++ Sbjct: 730 QRFKFDKIKVDQSFVRRLGRHADTLTIVRAITHLGHNLGLQVTVEGVETQEQLAMLRELG 789 Query: 231 AFAAQGWFLSRPAPIETLNTA 251 QG+ +RPAP+ L+ A Sbjct: 790 CDQMQGYLFARPAPMTELSQA 810 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 106/268 (39%), Gaps = 25/268 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R + R+ +A +++Q + L +QPI + GR+ E L HP Sbjct: 442 MQRAMSMRVRLSQALRDAVQAGQLRLH------YQPIVELASGRVRKAEALLRWEHP--E 493 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + V + A+ F S+N+ A Sbjct: 494 FGEVSPAAFIPIAEDCGSIHCIGDWVFERAACQAARWRSRF-GTDFQVSINVSPRQFQAG 552 Query: 115 RQQ-PKILRQIERL----PWLRFELVEHIRLPKDSTFA-SMCEFG----PLWLDDFGTGM 164 + + L ++ L L E+ E + + D A + +F + LDDFGTG Sbjct: 553 GRDFGRWLERLGELGLDGSMLALEITETLLMDTDQAIADKLAQFRAAGVQIALDDFGTGY 612 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + L E R DY+KI R + + L ++ + +R VI EGVETP+++ Sbjct: 613 SSLAYLKEFRIDYLKIDRTFVRDMTPDSKSFLLSEAIVTMAHRLGLKVIAEGVETPQQYA 672 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ SRP P + + Sbjct: 673 LLERIGCDYFQGYLFSRPLPEDAFEGLL 700 >UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9A3_KANKD Length = 1515 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 100/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M Q RI+ +++++ F +QP G++ +E L +P Sbjct: 1241 MNEQAKLRITLESELRQAIEKDEF------VMFYQPKVSLQTGKITGMEALVRWRNPRRG 1294 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + +P I + V+++ + + I HG +VN+ Sbjct: 1295 LVLPGEFIPLAEEAGFIIPISQ-RVIEKTCLQIRDWQNRGIFHG-KVAVNLSAVQFYHEN 1352 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 + + L FE+ E + + + ++ E G L LDDFG G ++ Sbjct: 1353 LWETVKNALHLAKIEPDALEFEITEGMVMEDLAQSLQQMRTLREMGISLALDDFGVGYSS 1412 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D +KI R L S R L + ++ L + V+ EGVE + + Sbjct: 1413 LGNLKDFPIDTLKIDRTFVWDLEDSDRDRNLVASIVTLAHNLDIKVVAEGVENRNQVDAL 1472 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ SRP P + T + Sbjct: 1473 REMGCEEIQGFIFSRPVPPWDIETML 1498 >UniRef50_B7KI79 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=4 Tax=Cyanobacteria RepID=B7KI79_CYAP7 Length = 580 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 106/266 (39%), Gaps = 24/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHP--- 56 M R+V +R+ +++Q + +L +QPI G + A E L HP Sbjct: 309 MQRRVSERLQLETDLQQAIQNQELYLH------YQPIVSLETGEITAFEALLRWHHPTRG 362 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++P++ +P I + + + L + +F L SVN+ G L Sbjct: 363 LISPAEFIPLAEETGLIIPLGQWALSQACQRLRLWQEEFPHLSALSMSVNLSGVQLSNPD 422 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK--------DSTFASMCEF-GPLWLDDFGT 162 +I +E + L+ E+ E + + + E L +DDFGT Sbjct: 423 LIKQIDELLESVGLCGDSLKLEITESFLMENMIENPLAANQILKQLKERQIKLCIDDFGT 482 Query: 163 GMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEE 222 G ++ S L + D +KI R + + + +++L ++ EG+ET ++ Sbjct: 483 GYSSLSYLHHLPIDILKIDRSFLNSKTEKGKNSEIVKSIVNLAKDLGLALVAEGIETEKQ 542 Query: 223 WRDVQNSPAFAAQGWFLSRPAPIETL 248 ++ QG+ ++P + TL Sbjct: 543 LTMLKQLQCDYGQGYLFAKPLDVHTL 568 >UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBI7_METSD Length = 681 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 22/263 (8%) Query: 4 QVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNPSQR 62 + +R +L++ F L +QP+ R ++ E L H + Sbjct: 426 KAAERREVETNLRFALKKEEFLLH------YQPLVDLATREIIGAEALLRWQHES--GKL 477 Query: 63 LPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHG----LLASVNIDGPTLIALRQQP 118 + PD++ + + + E + A + + G + +VN+ + Sbjct: 478 IMPDKFIGIAEETGLIIPIGEWVMRSACQVAVALNRGRPRPVTVAVNLSTRQFLHNDLVS 537 Query: 119 KILRQIE----RLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSA 169 I + W++ E+ E + L S+ G + +DDFGTG + S Sbjct: 538 SIQAILAETGCHTDWIKLEITESLLLENTDNIQRMLQSLSAMGLCISIDDFGTGYSALSY 597 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L +KI R + + E + ++ L + V+ EGVET E+ + Sbjct: 598 LHRFPVRELKIDRSFTSDITDNAERALIVQAIVSLARNLNKNVVAEGVETLEQADYLHKM 657 Query: 230 PAFAAQGWFLSRPAPIETLNTAV 252 AQG+ S+P P+E + Sbjct: 658 GCPQAQGYLFSKPLPLEQFLALL 680 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 92/261 (35%), Gaps = 22/261 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V E+L+ F L +QP G ++ E L PL+ Sbjct: 660 MQAVVDAHARLEARMHEALEANAFRL------FFQPQVNRRGVVIGAEALLRW--PLDGG 711 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ LA+ L +VN+ Sbjct: 712 AMVSPAEFIPLAEDTGHIVRLGLWVLRSACAQLARWQMNEGTRHLKIAVNVSARQFHQPD 771 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMAN 166 + + L EL E L D T M E L LDDFGTG ++ Sbjct: 772 FVASVKDSVRAAAIDPCRLELELTESAILSDVDETIRRMNELRALGIRFALDDFGTGYSS 831 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +D +KI + + + + +L L + V+ EGVE PE+ + Sbjct: 832 LSYLKRLPFDQLKIDQSFVRDMAEDESSEAIVLAILSLSHALGLEVVAEGVEMPEQRDFL 891 Query: 227 QNSPAFAAQGWFLSRPAPIET 247 + + QG+ +P P+E Sbjct: 892 RQHGCDSFQGYLFGKPLPMEA 912 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 95/264 (35%), Gaps = 22/264 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V++R + A ++ E + + +Q R+ E L HP + Sbjct: 645 MQTVVMERAALEAALRRAIDEDQLLVH------YQAQVLNGNRVTGAEALVRWQHPQH-- 696 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V+ LAQ + L +VN+ L Sbjct: 697 GLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQLRENS 756 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 +L + R L+ EL E + + + M LDDFG G ++ Sbjct: 757 FVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGVGYSS 816 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI R + P + ++ L GVI EGVET + + + Sbjct: 817 LSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQRQFL 876 Query: 227 QNSPAFAAQGWFLSRPAPIETLNT 250 ++ A QG+ RP PIE Sbjct: 877 ADAGCHAYQGYLFCRPLPIEDFEA 900 >UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VBK7_DESVV Length = 1413 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 26/270 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M +Q + ++ +L+ +F L +QP++ T R L+ E L HPL Sbjct: 1135 MHQQAMDAMNLENDLGAALRWGQFELD------YQPVFDTRSRALLGFEALVRWRHPLR- 1187 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 +PP + + + V++ + LA+ L +VN+ Sbjct: 1188 -GLIPPTAFIPVAEETGIITRLGHWVLETALTALARWRLQIPGIDDLYVAVNMSALQFAQ 1246 Query: 114 LRQQPKILRQIERL----PWLRFELVEHIRLPKDST----FASMCEFGP-LWLDDFGTGM 164 + +++ L+ E+ E + +T +++ + G + +DDFGTG Sbjct: 1247 PTLPGSVRDALQKTGLPASCLKVEITETAIMQDPTTALQRISALRDLGVGIGIDDFGTGY 1306 Query: 165 ANFSALSEVRYDYIKIARELFVMLR--QSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEE 222 ++ + L D +K+ R + R + ++ L + V+ EGVET E+ Sbjct: 1307 SSLAYLQRFPVDTLKVDRSFVSQSTTPEGEGNREIVRAVVVLAHSLSLAVVAEGVETEEQ 1366 Query: 223 WRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + A QG+ LSRP P + + Sbjct: 1367 FAFLAGLGCDAVQGYLLSRPVPEADIPAHI 1396 >UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6G7_9BACL Length = 700 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 99/267 (37%), Gaps = 21/267 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ ++ ++L+ F+L+ +QP + G+++ +E L HP Sbjct: 438 MKQRTQAKVELENDMRKALEREEFFLE------FQPQIRLDTGKMVGMEALVRWNHPKR- 490 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQK--ADFFIE--HGLLASVNIDGPTLIALR 115 +PP + S + + E + A + + ++ + SVN+ Sbjct: 491 -GLIPPSEFIPLAEESGLIVPLGEWVLKTACQYNKKWQMDGFEPVCVSVNLSMRQFRQYN 549 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKDSTFASMCEFGPL----WLDDFGTGMANF 167 + + + +L E+ E + ++ + L +DDFGTG ++ Sbjct: 550 LAEHVNAILREVGLDPQYLELEVTESMTYDIETALDQLHRLKRLGIHISIDDFGTGYSSL 609 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 L + D +KI R + + S + + + V EGVE E+ ++ Sbjct: 610 YYLKSLPIDRLKIDRAFVKEVMYDGNDAAIVSTITTMAHHLKLKVTAEGVENEEQLEFLK 669 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ S+P L + L+ Sbjct: 670 RQRCHEGQGYLFSKPVSAGVLESEFLS 696 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 243 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 106/264 (40%), Gaps = 20/264 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHP--- 56 M Q + + +L+ + +QPI T G+L+ E L HP Sbjct: 1209 MHIQATRLLELETNLRLALEREELIVH------YQPIVSLTTGKLLGFEALVRWEHPKKG 1262 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++P + +P I +++ + A + +F + SVN+ G L Sbjct: 1263 LISPGEFIPIAEETGLIIPLGEWVLLESCRQMKAWQKEFSGLDKIRVSVNLSGKQLEYPH 1322 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDSTFASMC-----EFGPLWLDDFGTGMAN 166 + +++ L+ E+ E + + + + + + +DDFGTG ++ Sbjct: 1323 LINCLESILKQTGLEGKNLKLEITESMLMNNKEVVSDLLLQIKGKNIQISIDDFGTGYSS 1382 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI R + Q E + +++L + V+ EGVET + + + Sbjct: 1383 LSYLHYLPVDTLKIDRSFVNRMTQLGENFEIVEAIINLAHHLQMDVVAEGVETEQHIKQL 1442 Query: 227 QNSPAFAAQGWFLSRPAPIETLNT 250 + + QG+F S+P + + + Sbjct: 1443 KQLGCESGQGYFFSKPLDSQKVTS 1466 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 104/269 (38%), Gaps = 25/269 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M I+R+ +L+ +F L +QP L+ VE L HP Sbjct: 615 MRAGAIRRLEIVNDLHRALERNQFVLH------FQPQIDLRTNSLIGVEALLRWVHP--E 666 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEH-GLLASVNIDGPTLIA 113 +PP + + + V++ D F + L+ SVN+ G L Sbjct: 667 RGLIPPLEFIPVAEETGLINDLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQ 726 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGM 164 R ++ +E + L E+ E + + + T ++ E G L +DDFGTG Sbjct: 727 PRLAEEVAAALEDSGFPADQLVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGY 786 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQ-SPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEW 223 ++ + L D +KI + L + E + ++ L + EGVE E Sbjct: 787 SSLTYLQRFPIDILKIDKSFVDGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHV 846 Query: 224 RDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 R++Q+ QG+F +RP L T + Sbjct: 847 RELQSLHCDIGQGYFFARPLDAGALTTLM 875 >UniRef50_C6QF35 Diguanylate phosphodiesterase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF35_9RHIZ Length = 571 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 90/254 (35%), Gaps = 16/254 (6%) Query: 7 QRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQRLPP 65 QR+ E+L F L +QPI +++ E L HP +P Sbjct: 322 QRMQMETEMREALANNAFELH------YQPIVNIKTRKIVGCEALIRWRHP--ERGLIPA 373 Query: 66 DRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIE 125 + + + + + A + +VNI KIL + Sbjct: 374 SEFIPVAEECGIIGQIGDWVLKTACAEASRWPDDIWIAVNISAAQFSGGNLVDKILALSK 433 Query: 126 RLPW--LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSALSEVRYDYI 178 RLP L E+ E + + +T + + G +DDFGTG ++ S L +D I Sbjct: 434 RLPASRLVLEITETLLMKDRDSAAATLERLKKLGVRFAIDDFGTGFSSLSYLQSFPFDKI 493 Query: 179 KIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWF 238 KI R TL ++ L + EGVET ++ ++ AQG+ Sbjct: 494 KIDRSFVSNTANQKRSATLRRSIIQLGYNLGMTSVAEGVETKQQLDLLRAEGCIEAQGFL 553 Query: 239 LSRPAPIETLNTAV 252 S P E + Sbjct: 554 FSPAVPSEKIRELF 567 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 22/263 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++R+ ++L+ +F + +QP GR+ VE L HP Sbjct: 604 MNTRAMERLLLQNQLHQALELGQFQVH------YQPQMDLRSGRICGVEALVRWQHP--E 655 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQ-IDLLAQKADFFIEHGLL---ASVNIDGPTLIALR 115 +PP + + +E + E + A++ + + GL SVN+ Sbjct: 656 RGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPD 715 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + R + L E+ E + + T + + G + +DDFGTG ++ Sbjct: 716 LPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSS 775 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + +KI RE + Q + + ++ L VI EGVET E+ + Sbjct: 776 LAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFL 835 Query: 227 QNSPAFAAQGWFLSRPAPIETLN 249 + A QG+F++RP P L Sbjct: 836 REHGCDAVQGFFIARPMPAGELT 858 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 98/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R + +S++ R F L +Q R + E L HP Sbjct: 870 MQDTLNTRTALEADLRKSIERREFNL------FYQIQVDEMNRPVGAEALIRWIHPKR-- 921 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++E L + + L+ +VN+ Sbjct: 922 GMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSD 981 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ +E+ L+ EL E + ++ E G LDDFGTG ++ Sbjct: 982 FATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSS 1041 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + ++ + +KI + L + + + ++ + VI EGVET E+ + + Sbjct: 1042 LQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLL 1101 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 N QG+ S+P PI + + Sbjct: 1102 LNKGCTHFQGYLFSKPLPIREFDALL 1127 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 103/262 (39%), Gaps = 22/262 (8%) Query: 5 VIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLP 64 ++ R A +L++++ L +Q + + E+L HP+ + Sbjct: 875 LLARAELEHALHHALEQQQLML------YYQVQVNADYQPVGAEVLLRWFHPV--LGMIS 926 Query: 65 PDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 P ++ S + V+++ D L + A + L+ +VN+ K Sbjct: 927 PAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASDVFKCDLVLAVNVSIRQFHEADFAQK 986 Query: 120 ILRQIE----RLPWLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMANFSAL 170 + + L+ E+ E + + ++ A+M + + +DDFGTG ++ S++ Sbjct: 987 VQALVTDSGISPDRLKLEITESMLVHDVENIIATMQQLKKIGLNFSMDDFGTGYSSLSSI 1046 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 + D +KI + + + + ++ + +I EG+ET ++ R + Sbjct: 1047 KRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQSMKLNIIAEGIETEQQRRLLALKG 1106 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG+ S+P P+ + Sbjct: 1107 CTNYQGYLFSKPVPLSDFEGLL 1128 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 106/269 (39%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 + ++ +R+ +++ F+L+ +QPI GR+ AVE L P Sbjct: 464 LNERLHERMQLEFKLRGAVEREEFFLE------YQPILDSKTGRITAVEALLRWNDP--E 515 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 R+ PD + + + V++ L Q D + + +VNI G Sbjct: 516 KGRVMPDSFIPLAEDTGVILPLGEWVLRTACAKLRQWQDAGVMP-VRMAVNISGRQFTQG 574 Query: 115 RQ----QPKILRQIERLPWLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMA 165 + +L+ WL EL E + + T +C + +DDFGTG + Sbjct: 575 DLSKTVEDALLQSGVHPSWLELELTETCLIKNVEETVRKLCRLKGLCVSISIDDFGTGYS 634 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L D++KI R + + P+ R + ++ + VI EGVET ++ Sbjct: 635 SLQYLKNFPIDHLKIDRGFINNVCELPDDRAIVDAIIGIAKAMDLHVIAEGVETRQQAEH 694 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG++ RP P E L + + Sbjct: 695 LMRRGCDEFQGYYFYRPLPEEKLLEVLAS 723 >UniRef50_Q1YRT2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRT2_9GAMM Length = 314 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 105/266 (39%), Gaps = 21/266 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++ +R+ + +++ + L +QP G L+ E L HPL Sbjct: 51 MEAEIAKRLKLEQELRKAIDSDQLVLH------YQPQIDFKTGDLLGAEALVRWEHPLK- 103 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQ-IDLLAQKADFFIEHG--LLASVNIDGPTLIALRQ 116 + PD + S + + + + +A + +++ G L +VN+ L+ Sbjct: 104 -GLVSPDDFIPLAEESGLINQLTDWVLKNVAVQTKRWLDEGYSLRLAVNLSVKDLMQEDF 162 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMANF 167 K+ I+R L E+ E + + + G + +DDFG+G ++ Sbjct: 163 HTKLEDLIKRSDLPPDVLELEITESTLMDHPELMIKELNKIKKMGITVAVDDFGSGYSSL 222 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L ++ D +KI R + P + + ++ L + EGVET + + ++ Sbjct: 223 NYLKKLPVDVLKIDRSFISDIESDPNDSAIVAGIIALAKNLGMSTVAEGVETEAQRKILE 282 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVL 253 QG+ +S+P P + L Sbjct: 283 QLGCDTFQGYLVSKPVPPQLFTEQFL 308 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 91/269 (33%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + + + +L+ L +QP + R L+ E L HP Sbjct: 1138 MQERSARNLQIENDLRRALENGELRLH------YQPQFTLADRRLVGAEALLRWQHP--Q 1189 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + V++ + L + + +VN+ Sbjct: 1190 LGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPP-MTVAVNLSAVQFRQA 1248 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + R ++ +L EL E + + +T + G + +DDFGTG + Sbjct: 1249 SLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYS 1308 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L R +KI R L PE + + + L I EGVE+ + Sbjct: 1309 SMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAF 1368 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ AQG+ SRP V A Sbjct: 1369 LRAKGCDEAQGYLFSRPLAPAQFAAFVRA 1397 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 98/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M Q I+R+ ++L+ F L +QPI RL A+E+L HP Sbjct: 812 MNAQAIERLQLERGLRQALERGEFELH------FQPIVAAATYRLEALEVLLRWRHP--E 863 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + + V+++ LA+ + H ++N+ Sbjct: 864 LGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGL-HVPRLAINLSARQFEQQ 922 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 ++ + L E+ E + + S + G L +DDFGTG + Sbjct: 923 GLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYS 982 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R L + + +L + + V+ EGVET + Sbjct: 983 SLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAF 1042 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ SRP P L + Sbjct: 1043 LCAKGCQLLQGYLFSRPLPAAELPAFL 1069 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 99/267 (37%), Gaps = 22/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R+ ++R+ ++ +++ + +QP G++ +E L HP Sbjct: 675 MNRKALERLKLETFLRVAIVQQQL------SVYYQPKVSVLSGKMTGMEALLRWQHP--E 726 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHG----LLASVNIDGPTLIALR 115 + P + + + + + + + + + +VN+ L Sbjct: 727 LGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDN 786 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 +++ + +L E+ E + + + + + G L LDDFGTG ++ Sbjct: 787 FAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSS 846 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P ++ S L + V EGVET E+ + Sbjct: 847 LSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFI 906 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 + QG+ SRP P + L Sbjct: 907 RMLNCEEYQGYLFSRPIPASEVVKYFL 933 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 101/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ +R+ + ++L+ F L +QP G+++ +E L P Sbjct: 443 MQDRLNERLKLESSLKQALENDEFVLH------YQPQVDLSTGKIIGLEALIRWQSPT-- 494 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA-DFFIEHGL---LASVNIDGPTLIALR 115 +PP + + + E + K + GL ++NI + + Sbjct: 495 LGLVPPGDFIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVPVAINISALQFMEQK 554 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 + + + + +L EL E + + S + + G L +DDFGTG +N Sbjct: 555 TEELVKQALNEYMVEPKYLELELTESLSMLDPVTSISLMQRLKDIGVSLSIDDFGTGYSN 614 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI + L +P+ ++ ++ + I EG ET + + Sbjct: 615 LSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAGQIALL 674 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 A QG++ SRP P + + Sbjct: 675 AAENCDAIQGFYFSRPLPEAEICAML 700 >UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 Tax=Aurantimonadaceae RepID=Q1YLJ5_MOBAS Length = 828 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 21/266 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR--LMAVELLTVVTHPLN 58 M +++ QR ++++E +F L +QP GR + E L HP Sbjct: 547 MRQKLQQRRELEIDLQKAIEEGQFEL------FYQPFVD-TGRRAISGFEALLRWNHP-- 597 Query: 59 PSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQP 118 R+ P + + + + A + L SVN+ + Sbjct: 598 ERGRVSPSTFIPLAEETGMITPIGLWALETACEQASNWVSDLAISVNLSAVQFKSPTLVA 657 Query: 119 KILRQIE----RLPWLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMANFSA 169 + R + + L+ E+ E + L + D + + EF + +DDFGTG ++ Sbjct: 658 DVRRVLAKSGLQPSRLQIEVTESLFLDEGDKVLSILTEFRRMGLTISMDDFGTGYSSLGY 717 Query: 170 LSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNS 229 L+ +D IKI + + + PE + ++ L N VI EG+ETPE+ R + Sbjct: 718 LNRFPFDKIKIDQSFVRDMSR-PENIAIVRSVIGLSNALDMRVIAEGIETPEQMRILYAE 776 Query: 230 PAFAAQGWFLSRPAPIETLNTAVLAL 255 QG++ SRP P L ++ + Sbjct: 777 GCREMQGYYFSRPRPASDLPKMLVEI 802 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 103/258 (39%), Gaps = 18/258 (6%) Query: 11 NPEASIESLQE---RRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTH----PLNPSQR 62 N A+ L E ++ + E + +QP + G L +E L H P++P + Sbjct: 1247 NEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALLRWHHTELGPISPVEF 1306 Query: 63 LPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQP-KIL 121 +P T I V+ LA+ + + +VN+ L A ++ Sbjct: 1307 IPLAEE-TGIINQIGHWVINHACQQLAEWNALGF-NNISMAVNLSARQLKADIISTIEVA 1364 Query: 122 RQIERLPW--LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSALSEVR 174 + LP L EL E + + S + + G + +DDFGTG ++ S L Sbjct: 1365 LAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGTGYSSLSYLKRFP 1424 Query: 175 YDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAA 234 D +KI RE + P+ + S ++ L + V+ EGVET + + Sbjct: 1425 IDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQLNFLGLQGCDEV 1484 Query: 235 QGWFLSRPAPIETLNTAV 252 QG+ LS+P + T + Sbjct: 1485 QGFLLSKPLSAKDCLTLL 1502 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 96/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M + ++R++ A +L L +QP+ + G L+AVE L HP Sbjct: 594 MNARSLERLALETALHRALPRDELQL------YFQPVMKAEGGELVAVEALLRWRHP--D 645 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKAD--FFIEHG--LLASVNIDGPTLIALR 115 + P + + + + E + A + + G L VNI Sbjct: 646 LGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREEG 705 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMAN 166 + + L EL E + + D A + L +DDFGTG ++ Sbjct: 706 FAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYSS 765 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L D +KI R + ++ L S ++ L + V+ EGVET + Sbjct: 766 LAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVL 825 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + AQG+ S P P E A Sbjct: 826 RRQGCDLAQGFHFSPPLPWEEFVKAY 851 >UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3A4_9BURK Length = 1083 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 95/266 (35%), Gaps = 26/266 (9%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPS 60 R+V R + ++ +L+ R F L +QP G +E L HP Sbjct: 804 DRRVQARQAMEQSLRRALERREFALH------YQPRMSARTGMPTGLEALLRWRHPSLGE 857 Query: 61 QRLPPDRYFTEITVSHRMEVVKEQI--DLLAQKADFFIE------HGLLASVNIDGPTLI 112 P + + + + + AQ A + GL SVN+ L Sbjct: 858 VL--PGEFIPIAEEAGLIRAIGAWVLDQACAQWAAWRASEAGGGLAGLPVSVNLSAAQLA 915 Query: 113 ALRQQPKILRQIER----LPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTG 163 P I + R L E+ E + A++ + G L +DDFGTG Sbjct: 916 DPLLVPDIAALLARHGMPARCLELEITESQLMDNAGVAQGQLAALKQLGVQLSIDDFGTG 975 Query: 164 MANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEW 223 ++ + L D +K+ + + SP + ++ L V+ EGVE Sbjct: 976 YSSLAYLKRFAIDKLKVDKSFIRDMLASPADMAITRAIIGLGRTLGLQVVAEGVEDAATL 1035 Query: 224 RDVQNSPAFAAQGWFLSRPAPIETLN 249 R +++ QG+ SR P E L Sbjct: 1036 RMLESLDCDEVQGYLFSRALPPEALQ 1061 >UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Methylobacterium RepID=B1ZEQ0_METPB Length = 716 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 97/264 (36%), Gaps = 18/264 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M + +R+ E+L + RF L +QP+ R+ +E L HP Sbjct: 439 MDATLRERLGLERELREALAQSRFELH------YQPLVDLSDNRITGMEALVRWRHP--E 490 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + + E + A + + +VN+ L Sbjct: 491 RGLVNPAVFIPLAEETGLIVPIGEWVLSQACRDAAAWPDAISVAVNVSPLQLRNRGFVQS 550 Query: 120 ILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSAL 170 +L + + L E+ E + L T S+ G + +DDFGTG ++ S L Sbjct: 551 VLGALATSGLKASRLELEITESVLLDDTEVNLETLHSLRRLGVRISMDDFGTGYSSISYL 610 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI R + + ++ L +VEGVET + ++ Sbjct: 611 RRFPFDKIKIDRSFVPDSAGQSDAGAIIRAIVSLGASLGITTLVEGVETEPQLATIRAEG 670 Query: 231 AFAAQGWFLSRPAPIETLNTAVLA 254 A QG+ S P P+ + + A Sbjct: 671 AQEVQGYLFSPPRPVHEIAVLLEA 694 >UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVS6_9PROT Length = 829 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 95/268 (35%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + + +L L +QPI GR+ E L+ H Sbjct: 564 MRGTTVTPLDVETDLRRALDRNEMILN------FQPIVSLADGRIRGFEALSRWRH--KE 615 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHG-LLASVNIDGPTLIA 113 +PP + + + V++ + + F + G SVN+ G Sbjct: 616 RGDIPPSEFIPIAEETGMIVELGQWVLRNACAQMVEWNKEFPDQGPFEISVNLSGRQFTQ 675 Query: 114 LRQQPKILRQIE----RLPWLRFELVEHIRLPKDSTFASMCEF-----GPLWLDDFGTGM 164 L + ++ +L+ E+ E + A M + +DDFGTG Sbjct: 676 LDLVKMVTNSLDGTGLDASFLKLEITESALMENAQRSAQMLRHLKDLHIKVCVDDFGTGY 735 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + D +KI + + ++ + + L VI EGVETPE+ Sbjct: 736 SSLSYLHKFPIDTLKIDKSFVQDMGRNRHNLEIVRTIAVLAQNLRLDVIAEGVETPEQLA 795 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ AQG+ SRP + + + Sbjct: 796 QLRAIGCGYAQGFLFSRPLTADNVRHLL 823 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 96/265 (36%), Gaps = 23/265 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNP 59 M + R++ E+++ +F L +QP + RL E L H + Sbjct: 655 MQAAITSRVALEADLREAVEAGQFQL------YYQPQVVGESHRLTGAEALLRWHH--SR 706 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + + V++ LA A L +VN+ + Sbjct: 707 RGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQT 766 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMA 165 ++L + L+ EL E + + + A M LDDFGTG + Sbjct: 767 DFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYS 826 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI + + + ++ L VI EGVET E+ Sbjct: 827 SLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNF 886 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNT 250 + S A QG+ S+P P+ Sbjct: 887 LAESGCHAYQGYLFSKPLPLAGFEQ 911 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 94/267 (35%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M R R+ ++ F L +QP + + G L +E L HP Sbjct: 549 MNRAATARLDLERKLRGAVARGEFELW------YQPQFDSRHGHLTGLEALVRWRHP--Q 600 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + + V++E Q D + L SVN+ L Sbjct: 601 DGLIAPLRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPE-LRISVNLSVRQLREK 659 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + + R L E+ E + + ++ G + +DDFGTG + Sbjct: 660 CLVDTVWTTLAASGLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHS 719 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D++KI R + + + + L + VI EGVE+ + Sbjct: 720 SLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVAR 779 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ SRP + + + Sbjct: 780 LRELGCDELQGFHFSRPVTADVVENLL 806 >UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAW8_ALHEH Length = 1051 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 97/270 (35%), Gaps = 25/270 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + +R+S +L F L +QP G L +E L Sbjct: 783 MTSRARERLSLESRLRRALDRGEFRLH------YQPQVSLADGTLTGMEALLRWH--AGD 834 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + + V+ E + L SVN+ L Sbjct: 835 EGDISPARFIPIAEETGLIVPLGRWVLGEACRQNRAWRQAGLP-ALPVSVNLSVVQLRRS 893 Query: 115 RQQPKILRQIER--LPW--LRFELVEHIRLPKDS-----TFASMCEFG-PLWLDDFGTGM 164 + R +E LP L E+ E + L +D F ++ E G L +DDFGTG Sbjct: 894 DVVADVRRALETSGLPGDGLHLEVTESLFLSEDDPAVVTGFQTLREMGISLAIDDFGTGY 953 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 +N L + +KI + + S + ++ + GVI EGVET E R Sbjct: 954 SNLGYLKRLPIAKLKIDQSFVRGIGDSGHDTAINQAIISIARSLGLGVIAEGVETAAELR 1013 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +Q QG++ SRP E + A Sbjct: 1014 VLQALGCDEIQGFYYSRPLDAERAGQLMAA 1043 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 26/267 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + + I ++L++ + +QP ++ VE L H Sbjct: 670 MDTRTFESIKLENDLYKALEQEELVI------YYQPQINGKTNKIEGVEALIRWNH--QE 721 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PPD++ + + V+KE L + D + SVN+ L Sbjct: 722 HGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQG-SPLISMSVNLSARQLEQS 780 Query: 115 RQ---QPKILRQIERLP-WLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMA 165 +L ++E P +++ EL E++ + +ST +M + L +DDFGTG + Sbjct: 781 DLFAMVKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYS 840 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L ++ +KI + + + + + ++ L VI EGVET E+ Sbjct: 841 SLGYLKKLPISTLKIDKSFVQDMTKD--DAAITNTIITLAKNLNLDVIAEGVETKEQVEF 898 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+F SRP E + Sbjct: 899 LSARNCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 91/258 (35%), Gaps = 24/258 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M R +R++ ++ + +QP ++ VE L HP + Sbjct: 563 MNRTAAERLNIERKLRHAIARNEL------SLVFQPQFRAEDTTPTGVEALLRWHHPTD- 615 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + + V+ +A+ + ++ L +VN+ L Sbjct: 616 -GMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKP-LRIAVNVSARQLRRR 673 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMA 165 + + L E+ E + + G L +DDFGTG + Sbjct: 674 DFCETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYS 733 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D++KI R + R + + L + VI EGVET ++ Sbjct: 734 SLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHEL 793 Query: 226 VQNSPAFAAQGWFLSRPA 243 ++ + QG+ S+P Sbjct: 794 LRANGCDEVQGFLFSKPL 811 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 101/261 (38%), Gaps = 24/261 (9%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNPSQ 61 + V R++ +L +F L +QPI G + +E L HP+ Sbjct: 497 QSVRARLTMEGDLRAALDTNQFLLH------YQPIVSLNGAGVQGLEALVRWQHPVR--G 548 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 +PPD + S + V+ LAQ + H L ++N+ Sbjct: 549 LVPPDEFIPVAEDSGLIHEIGDWVIDAACAQLAQWDARGLSH-LTLAINLSPVQFRRDGL 607 Query: 117 QPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFGP-LWLDDFGTGMANF 167 +I R++ + L E+ E + + ++ T ++ G L +DDFGTG + Sbjct: 608 VSRIARRLRQHSIASERLHLEITESLLMEQNRHVAETLQTLDAMGIGLCIDDFGTGYSAL 667 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L +K+ R + + + R L ++ + + V+ EGVE + ++ Sbjct: 668 NYLRHFPIRQLKVDRSFVEDMLHAEDTRALVRAIVLMAHALRLEVVAEGVEEKSQLELLR 727 Query: 228 NSPAFAAQGWFLSRPAPIETL 248 QG+ LSRP P + Sbjct: 728 EMGCDQVQGYLLSRPLPAAEI 748 >UniRef50_A9BVF0 Diguanylate cyclase/phosphodiesterase n=2 Tax=cellular organisms RepID=A9BVF0_DELAS Length = 573 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 106/262 (40%), Gaps = 23/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHP--- 56 M + V + +A ++ ++ L +QP T GR+ +VE L HP Sbjct: 296 MRQGVAAQFDLQQALRRAVASQQLVL------FYQPKIDTRTGRIRSVEALARWNHPQFG 349 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++P +P F I+ V+ E AQ A + S+NI G L R Sbjct: 350 LISPRVFIPLAERFGLISEIG-DWVIDEACRQTAQWAR--ERRFMRVSINISGYQLFQTR 406 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 I I R L FE+ E + + D T A + G + +DDFGTG ++ Sbjct: 407 LAQFIAEAIARHHIRPEQLVFEITESVAMEDDKTTMAVIAELTGMGVQISIDDFGTGYSS 466 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L ++ D +KI R + + R + ++ L + V+ EGV ++ + Sbjct: 467 LALLRQLCADEVKIDRSFVRDVALKSDARAVVDAIVRLAHALELRVVAEGVTNQQQREVL 526 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 Q QG++ +RP + L Sbjct: 527 QALGCDELQGFYFARPMDAQAL 548 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 89/240 (37%), Gaps = 18/240 (7%) Query: 28 CERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRM-----EVV 81 E +QP G+++ +E L P + +PP + S + V+ Sbjct: 808 NEFLLHYQPQVDIVSGQIVGIEALVRWHDP--EAGLVPPSSFIPLAEESGLIGPLSEWVL 865 Query: 82 KEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLP----WLRFELVEH 137 +E D + SVN+ +++ + +L EL E Sbjct: 866 REACRQNKAWQDQGLPPA-RVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTES 924 Query: 138 IRLPKDS----TFASMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSP 192 + + G L +DDFGTG ++ S L D +KI R + S Sbjct: 925 TIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSG 984 Query: 193 EGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 + T+ S ++ L + VI EGVET + ++ QG++ ++P E ++ + Sbjct: 985 DDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELL 1044 >UniRef50_A1SWE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SWE1_PSYIN Length = 703 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 98/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M ++ + +SL+++ F L +QP Y L++ E L HP Sbjct: 446 MQEKLDYSTCLDKELRQSLKQKDFVL------YYQPQYDAKQNLVSAEALIRWNHP--EL 497 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S+ + V+ E L + L SVNI + Sbjct: 498 GLVNPGDFIKVAEESNLILPIGDWVLSEACQQLKKWQSDPQYQHLSLSVNISAKQIWQKD 557 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 I R + + L+ E+ E I L + FG LDDFGTG ++ Sbjct: 558 FVAGIKRIVSDSDINVSKLKLEITESILLRDINGTAEKLNDLVAFGLTFSLDDFGTGYSS 617 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D +KI + L + + ++ L + V+ EGVET + + Sbjct: 618 LGYLKNLPIDELKIDQSFIRDLFDNKMDLIMVKSIIDLGKNFGINVVAEGVETEAHFEIL 677 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG++ SRP P+ T + Sbjct: 678 KEFGCKIYQGYYFSRPVPVSEFVTLI 703 >UniRef50_Q2IV14 Diguanylate cyclase/phosphodiesterase n=4 Tax=Rhodopseudomonas palustris RepID=Q2IV14_RHOP2 Length = 673 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 17/256 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M Q+ ++ + +LQ F L +QP T G ++ E L HP+ Sbjct: 408 MDLQIREKRALQRELALALQNDEFELH------YQPQATTKGEIVGFEALLRWRHPVR-- 459 Query: 61 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI 120 + P + + + + E + A + L +VN+ L I Sbjct: 460 GMVSPAAFIPLAEETGLIGAIDEWVLRSACREAASWPKPLAIAVNLSPLDFGRLDVPALI 519 Query: 121 LRQIERL----PWLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMANFSALS 171 L+ + L E+ E + + + + +DDFG G ++ S L Sbjct: 520 LQVLLETGLDPKRLEVEITEGVLIDDFSGAIGILRRIKNCGVRVAMDDFGAGYSSLSYLQ 579 Query: 172 EVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPA 231 +D IKI + L +P+ + +L L +R VI EGVET + + + Sbjct: 580 SFPFDKIKIDQAFTRKLEINPDSAAIVEAILSLAHRLNLPVIAEGVETESQLAFLASVGC 639 Query: 232 FAAQGWFLSRPAPIET 247 QG+ + +P PI Sbjct: 640 GEVQGYLIGKPGPIAQ 655 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 87/264 (32%), Gaps = 18/264 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ R S +L + F L +QP GR E L HP Sbjct: 536 MNARMQARRSLELDLRRALARQEFEL------YFQPQVDARTGRFDGAEALIRWHHP--E 587 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + + E + A L +VN+ R Sbjct: 588 RGLVSPGEFIPLAEETGLIGPLGEWVLRTACAEARRWATPLPVAVNLSPVQFRDPRLAAT 647 Query: 120 ILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 + + L E+ E + + + + G + +DDFGTG ++ S L Sbjct: 648 VRGILAETGLPGSRLEIEITEGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYL 707 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI + Q + + + L EGVET ++ + Sbjct: 708 RRFPFDKIKIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEG 767 Query: 231 AFAAQGWFLSRPAPIETLNTAVLA 254 QG+ SRP P E++ A Sbjct: 768 CDQLQGYLYSRPVPAESIAELFRA 791 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 102/269 (37%), Gaps = 20/269 (7%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHP--- 56 M + + ++ +++ + + +QPI G++ E L HP Sbjct: 1128 MSGRALAQLRLETELRWAIERQELEV------YYQPIISLGTGKITGFEALVRWQHPEQG 1181 Query: 57 -LNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++P +P I + + L + F L SVN+ G Sbjct: 1182 MISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTN 1241 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDSTFASMCEF-----GPLWLDDFGTGMAN 166 +I + I+ L+ E+ E + + +++ E L++DDFGTG ++ Sbjct: 1242 LIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSS 1301 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI R + + E + ++ L + V+ EG+ET + + Sbjct: 1302 LSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQL 1361 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 + QG+F S+P + ++ L Sbjct: 1362 RGRRCEYGQGYFFSKPLNRQAAEQLMMNL 1390 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 89/259 (34%), Gaps = 18/259 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIY-QTCGRLMAVELLTVVTHPLNP 59 M R++ R + +L L +QP G + E L HP Sbjct: 507 MDRKLQARQRLVQDLRNALTRDELRLD------YQPFVKSETGVISGCEALLRWRHP--E 558 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + S + + + A + SVN+ + Sbjct: 559 RGMISPVEFIPLAEESGLIVPIGMWVIQQACREAASWPSTYRISVNVSPVQFRSRDLPQV 618 Query: 120 ILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMANFSAL 170 IL + L E+ E + + D+ + + L LDDFGTG ++ S L Sbjct: 619 ILAALTSSGLAPARLEVEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSSLSYL 678 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI R L + + + + + V EGVET ++ + ++ + Sbjct: 679 RRFPFDKIKIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRLRQTG 738 Query: 231 AFAAQGWFLSRPAPIETLN 249 QG+ SRP P L Sbjct: 739 CEELQGFLYSRPRPANELT 757 >UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89S23_BRAJA Length = 618 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 17/250 (6%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQ 61 +++ R ++L++ +F + +QP + G ++ E L HP Sbjct: 357 DQELRDRRLLQHDLRQALEQNQFLVH------FQPQARMDGEVIGFEALLRWNHPTR--G 408 Query: 62 RLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKIL 121 +PPDR+ + + + E + A + L +VN+ + A + I Sbjct: 409 FVPPDRFIPLAEENGLIVQIGEWVLREACREAASWPRPLQVAVNLSPVQVQAGDLERSIH 468 Query: 122 RQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFSALSE 172 + + L E+ E + + + + G + +DDFGTG ++ S L Sbjct: 469 QILLETGLAPTRLEVEITEGVLIGDFTRALNLLRRLKALGIRIAMDDFGTGYSSLSYLQS 528 Query: 173 VRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAF 232 +D IKI R L +P+ + +L L + VI EGVET + + Sbjct: 529 FPFDKIKIDRSFISNLEATPQSAEIVRAVLSLAHALNIPVIAEGVETEAQRAFLAREACE 588 Query: 233 AAQGWFLSRP 242 QG+ + RP Sbjct: 589 EMQGYLVGRP 598 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 90/261 (34%), Gaps = 22/261 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R +L F L +QP GR++ E L Sbjct: 746 MQAVVAARAELELKLRAALACNGFRL------YYQPQLDRNGRVIGAEALIRCFD--AEG 797 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + + P + + + V++ L GL S+N+ Sbjct: 798 EMISPAAFIPLAEETGLIVPIGEWVLETACAQLRAWQRTPSTAGLSLSINVSARQFHQPD 857 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMAN 166 K+ IER L EL E + + ++T M + L LDDFGTG ++ Sbjct: 858 FVGKVAAAIERHRIRPGGLEIELTESVVIGDIETTVLRMRQIKALGVRFALDDFGTGYSS 917 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +D +KI + + + + +L L V+ EGVET + + Sbjct: 918 LSYLKRLPFDQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLDLKVVAEGVETAAQHELL 977 Query: 227 QNSPAFAAQGWFLSRPAPIET 247 QG+ RP PIE Sbjct: 978 LTRGCELFQGYLFGRPVPIED 998 >UniRef50_Q07T95 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07T95_RHOP5 Length = 812 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 100/263 (38%), Gaps = 22/263 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + QR + + L+ R F L +Q GRL+ E L H Sbjct: 536 MQATISQRRALEADLRDDLRVRNFELH------FQAQIDVAGRLVGAEALIRWPHKRR-- 587 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PPD++ + + V++E + L Q + L ++N+ L + Sbjct: 588 GYVPPDQFIGIAETTGLILPIGNWVIEEACNRLKQWSARPGLANLSLAINVSAVQLHDEQ 647 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLP-KDSTFASMCEFG----PLWLDDFGTGMAN 166 ++ +ER L+ EL E + + D M LDDFGTG ++ Sbjct: 648 FVDHLVATLERTGADPNLLKLELTESVLIDCNDDVIERMNRLREKGVRFSLDDFGTGYSS 707 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L ++ + +KI R + + ++ L V+ EGVET + R++ Sbjct: 708 LLYLRKLPIEQLKIDRSFVRDILVDANDAAIAKMIIALGKTLGLDVLAEGVETEGQLREL 767 Query: 227 QNSPAFAAQGWFLSRPAPIETLN 249 A QG+ +SRP P+ Sbjct: 768 IEMGCDAYQGYLISRPVPVSEFE 790 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 99/269 (36%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG--RLMAVELLTVVTHPLN 58 + Q +R +L+E E +QP G R+ +E L P Sbjct: 794 LAEQAERRHRMEINLRSALKE------GEMQLVYQPQIDL-GKVRITGMEALLRWQSP-- 844 Query: 59 PSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEH----GLLASVNIDGPTLIAL 114 + P R+ + + + E + A + + L +VN+ Sbjct: 845 EEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQP 904 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMA 165 I + + L E+ E + L ++ ++ E L +DDFGTG + Sbjct: 905 DLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYS 964 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L ++ D IKIA+E + + + + + +I EGVE ++ Sbjct: 965 SLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAF 1024 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + A QG++ ++P P + + + + + Sbjct: 1025 LLLHGCHAMQGYYFAKPMPAQEVPSFIHS 1053 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 99/259 (38%), Gaps = 24/259 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQP-IYQTCGRLMAVELLTVVTHPLNP 59 + + + R+ ++ F L +QP I + G+L +E L H Sbjct: 524 LNAKTLDRLKLESDLRSAIDAGDFELH------YQPQIIGSSGQLWGLEALIRWRH--RE 575 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V+ + + LA+ H L+ SVNI Sbjct: 576 RGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNH-LVVSVNISALQFRQG 634 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 ++ ++ + EL E + + T + E G + +DDFGTG + Sbjct: 635 DFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFS 694 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + + +KI + + Q PE + ++ L + I EGVET E+ Sbjct: 695 SLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAEFDV 754 Query: 226 VQNSPAFAAQGWFLSRPAP 244 +Q QG+F +RP P Sbjct: 755 LQARGCRLMQGYFFARPMP 773 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 422 e-117 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 410 e-113 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 404 e-111 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 403 e-111 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-111 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-111 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 401 e-110 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 400 e-110 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-110 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 397 e-109 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 397 e-109 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-109 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 395 e-109 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 395 e-109 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 394 e-108 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 394 e-108 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 394 e-108 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 394 e-108 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 393 e-108 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 393 e-108 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 393 e-108 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-108 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 392 e-108 UniRef50_A8FYM5 Signal transduction protein containing a membran... 392 e-108 UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria R... 391 e-108 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 391 e-107 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 390 e-107 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 389 e-107 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 389 e-107 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 389 e-107 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 389 e-107 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-107 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 388 e-107 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-107 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 387 e-106 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 387 e-106 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 387 e-106 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 387 e-106 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-106 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 386 e-106 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 385 e-106 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 385 e-106 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 385 e-106 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 385 e-106 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 385 e-105 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 384 e-105 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 384 e-105 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 384 e-105 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 384 e-105 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 384 e-105 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 384 e-105 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 383 e-105 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 383 e-105 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 383 e-105 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 383 e-105 UniRef50_Q220B0 Response regulator receiver modulated diguanylat... 383 e-105 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 383 e-105 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 382 e-105 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 382 e-105 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 382 e-105 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 382 e-105 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 382 e-105 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 382 e-105 UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 382 e-105 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 382 e-105 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 381 e-105 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 381 e-104 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 381 e-104 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 381 e-104 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 381 e-104 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 381 e-104 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 381 e-104 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 381 e-104 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 381 e-104 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 381 e-104 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 381 e-104 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 381 e-104 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 380 e-104 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 380 e-104 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 380 e-104 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 380 e-104 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 379 e-104 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 379 e-104 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 379 e-104 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 379 e-104 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 379 e-104 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 379 e-104 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 379 e-104 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 379 e-104 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 379 e-104 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 379 e-104 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 379 e-104 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 379 e-104 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 379 e-104 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 379 e-104 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 378 e-103 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 378 e-103 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 377 e-103 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 377 e-103 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 377 e-103 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 377 e-103 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 377 e-103 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 377 e-103 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 377 e-103 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 377 e-103 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 377 e-103 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 377 e-103 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 377 e-103 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 377 e-103 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 377 e-103 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 377 e-103 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 376 e-103 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 376 e-103 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 376 e-103 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 376 e-103 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 376 e-103 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 376 e-103 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 376 e-103 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 376 e-103 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 376 e-103 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 376 e-103 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 376 e-103 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 376 e-103 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 376 e-103 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 375 e-103 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 375 e-103 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 375 e-102 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 375 e-102 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 374 e-102 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 374 e-102 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 374 e-102 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 374 e-102 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 374 e-102 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 374 e-102 UniRef50_C1DB08 Predicted signal transduction protein containing... 374 e-102 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 374 e-102 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 373 e-102 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 373 e-102 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 373 e-102 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 372 e-102 UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/P... 372 e-102 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 372 e-102 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 372 e-102 UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='N... 372 e-102 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 372 e-102 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 372 e-102 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 372 e-102 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 372 e-102 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 372 e-102 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 372 e-102 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 371 e-102 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 371 e-101 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 371 e-101 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 371 e-101 UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/P... 371 e-101 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 371 e-101 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 371 e-101 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 371 e-101 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 371 e-101 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 371 e-101 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 370 e-101 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 370 e-101 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 370 e-101 UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domai... 370 e-101 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 370 e-101 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 370 e-101 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 370 e-101 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 370 e-101 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 370 e-101 UniRef50_B8GNC0 Signal transduction protein containing a membran... 369 e-101 UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 369 e-101 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 369 e-101 UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 T... 369 e-101 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 369 e-101 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 369 e-101 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 369 e-101 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 369 e-101 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 369 e-101 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 369 e-101 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 368 e-101 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 368 e-100 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 368 e-100 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 368 e-100 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 368 e-100 UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/P... 368 e-100 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 368 e-100 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 367 e-100 UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 367 e-100 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 367 e-100 UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with respo... 367 e-100 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 367 e-100 UniRef50_Q2SPM3 Predicted signal transduction protein containing... 367 e-100 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 367 e-100 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 367 e-100 UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/P... 367 e-100 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 367 e-100 UniRef50_Q0KC83 Predicted signal transduction protein containing... 366 e-100 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 366 e-100 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 366 e-100 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 366 e-100 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 366 e-100 UniRef50_A0YP68 Hybrid signal transduction histidine kinase and ... 365 e-100 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 365 e-100 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 365 e-100 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 365 e-100 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 365 e-100 UniRef50_B5VVW5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ar... 365 e-100 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 365 e-100 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 365 e-100 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 365 e-99 UniRef50_C6X932 Diguanylate phosphodiesterase n=1 Tax=Methylovor... 365 1e-99 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 365 1e-99 UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 1e-99 UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 1e-99 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 364 1e-99 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 364 1e-99 UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 1e-99 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 364 1e-99 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 1e-99 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 1e-99 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 364 1e-99 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 364 2e-99 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 2e-99 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 2e-99 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 2e-99 UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 2e-99 Sequences not found previously or not previously below threshold: UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 381 e-104 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 377 e-103 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 377 e-103 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 374 e-102 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 373 e-102 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 372 e-102 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 372 e-102 UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/P... 372 e-102 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 372 e-102 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 371 e-101 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 368 e-100 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 366 e-100 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 366 e-100 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 366 e-100 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 365 e-100 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 365 1e-99 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 364 2e-99 UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 364 2e-99 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 422 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 99/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++R+ +++ F L +QP G+++ VE L HP Sbjct: 684 MNERALERLRLEGDLRNAMERGEFILH------YQPQLDLRTGKIVGVEALIRWQHP--E 735 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP R+ + + V++E + + L SVN+ Sbjct: 736 LGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLG-SLRMSVNLSARQFAQQ 794 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I +E L EL E + + + G L +DDFGTG + Sbjct: 795 DLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYS 854 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + P+ + + ++ L + VI EGVET E+ Sbjct: 855 SLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAY 914 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q QG+F SRP + + + Sbjct: 915 LQQHDCDQIQGYFFSRPITADAMEVML 941 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 410 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 100/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q ++R +L + F +QP + G+++ VE L HP Sbjct: 681 MNAQTLRRFELENNLRRALDRKEFV------IYYQPQVEIHTGKIVGVEALIRWQHP--Q 732 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + +++ D + +VN+ + Sbjct: 733 RGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSP-MRVTVNLSARQFLQP 791 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I +E WL E+ E + + + T + + G L +DDFGTG + Sbjct: 792 HLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYS 851 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + D +KI R L + + S ++ L + V+ EGVET E+ Sbjct: 852 SLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMF 911 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ ++P P+ L L+ Sbjct: 912 LRQQQCDLMQGYLFTKPLPVRELEQKYLS 940 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +V +R+S + +++ + F L +QP GR+ VE L HP Sbjct: 626 MNIRVFERLSLETSLHRAVKNQEFLLH------YQPRVDLRNGRICGVEALVRWNHP--E 677 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P ++ + + V++ D + L +VN+ Sbjct: 678 MGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPP-LRMAVNLSARQFRQE 736 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + WL EL E + + + + + G + +DDFGTG + Sbjct: 737 NLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYS 796 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI + + + P+ TL ++ + + I EGVE E+ Sbjct: 797 SLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDF 856 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + QG++ SRP E L + Sbjct: 857 LCRHQCEEMQGYYFSRPITAEELGRLLA 884 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 404 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 93/266 (34%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M R+ ++R+ +LQ + +QP+ + +++ +E L HP Sbjct: 612 MNRKTLERMMLENNLRNALQHDQLI------IYYQPLVDSTNQIVGMEALLRWHHP--EL 663 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ + + V++ + + +VN+ Sbjct: 664 GLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTR-FYVAVNLSVRQFREPD 722 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 I + +E L+ E+ E + + G +DDFGTG ++ Sbjct: 723 LVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSS 782 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L D +KI R + + + + + ++ + + EGVE E+ + Sbjct: 783 LSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFL 842 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG++ RP P E + Sbjct: 843 IHHGCHMMQGYYFGRPMPAEKFEDML 868 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 97/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q ++R+ +++ L +QP G ++ +E L HP+ Sbjct: 643 MNDQALERLRIEGELRHAIELNELVLH------YQPQVDLHTGAIVGLEALVRWNHPI-- 694 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + + V++ D L +VN+ Sbjct: 695 LGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQ-LRIAVNLSARQFTQA 753 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I ++ L EL E + T + G L +DDFGTG + Sbjct: 754 SLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHS 813 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + + + ++ S ++ L + VI EGVET + Sbjct: 814 SLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDI 873 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ QG++ +P P + + T +L Sbjct: 874 LRAQGCNEIQGYYFCKPLPSDQIETLLL 901 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 402 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 93/267 (34%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + RI +++ + +F L +QP + G L+ E L HP Sbjct: 525 MNSRAKTRIELESYLRKAVNQDQFVL------YYQPQFDIQSGELVGCEALLRWQHP--Q 576 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P+ + + + V++E + D + +VNI Sbjct: 577 MGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHSP-IRVAVNISPRQFREP 635 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I R ++ WL E+ E + + + G L +DDFGTG + Sbjct: 636 GFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYS 695 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI R + ++ ++ L + V+ EG+ET E+ Sbjct: 696 SLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLF 755 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ S P E + Sbjct: 756 LKEKGCEVGQGYLYSPPVAKEPFDHFF 782 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 402 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 100/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R + ++++ +F L +Q E L HP Sbjct: 630 MQETIAKRTALEGDLRKAIENHQFQLH------YQIQVDESRHPFGAEALIRWFHP--EH 681 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + PD++ S + V++ + + G + SVN+ Sbjct: 682 GMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQTD 741 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ I++ L+ EL E + L T +++ E G LDDFGTG ++ Sbjct: 742 FVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSS 801 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D +KI + + R + ++ + + VI EGVET E+ + + Sbjct: 802 LQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHL 861 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ +P PIE T++ Sbjct: 862 SSKGCKNFQGYLFGKPVPIEQFETSL 887 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + V+ R++ + +L+ F + +QP GR+ +E L P Sbjct: 695 LNDIVLARLTMEKYLRRALERDEFLVH------YQPKVDLLSGRITGMEALVRWQSP--E 746 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++ D + ++ +VN+ Sbjct: 747 LGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPP-MVVAVNLSPRQFRQE 805 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + R E + E+VE + + ++ E G L +DDFGTG + Sbjct: 806 DLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYS 865 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +D +KI + + + P + ++ L + V+ EG+ET + Sbjct: 866 SLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGY 925 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG++ SRP P + Sbjct: 926 LRGLACDEMQGFYFSRPVPAAEFEQML 952 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 98/266 (36%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V+QR + ++++ +F L +Q R+ E L HP Sbjct: 768 MQTVVVQRAALEAGLRNAIEDNQFLLH------YQAQVVGT-RVTGAEALVRWQHP--QR 818 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V++ LA+ A L +VN+ Sbjct: 819 GIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKAD 878 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 +L I R L+ EL E + + +++ G LDDFG G ++ Sbjct: 879 FVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSS 938 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI R + + ++ L GVI EGVET + + Sbjct: 939 LSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFL 998 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + +A QG++ RP PIE + Sbjct: 999 AAAGCYAYQGYYFCRPLPIEDFEALL 1024 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 103/265 (38%), Gaps = 23/265 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + + +L E++F L +Q RL E+L HP Sbjct: 567 MEIAVKVRAEMEDDLLRALAEKQFLLH------YQAQM-VGERLTGAEVLLRWQHP--QR 617 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ LAQ A L +VN+ Sbjct: 618 GMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQND 677 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMAN 166 ++L +E+ L+ EL E + + A++ G LDDFGTG ++ Sbjct: 678 FVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSS 737 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D++KI + + ++ ++ L N GVI EGVET + + Sbjct: 738 LSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFL 797 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTA 251 +S QG++ SRP PIE + Sbjct: 798 ASSGCHTYQGYYFSRPLPIEDFESF 822 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 98/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + +R+S +L+ F L +QP G++ +E L HP Sbjct: 362 MNARAFERLSLENDMRRALERDEFVLH------YQPKVNVEHGQIACMEALVRWQHPS-- 413 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP R+ + + V++ D + +VN+ L Sbjct: 414 MGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPT-MQVAVNLSPRQLRQG 472 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + R + WL E+ E I + TF + G + +DDFGTG + Sbjct: 473 DLSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYS 532 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L + +KI R + +P+ + ++ + GV+ EGVET E+ Sbjct: 533 SLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEV 592 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ S PAP E + Sbjct: 593 LRALNCRYMQGFLFSEPAPAEQFTPVL 619 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 101/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R++ ++L ++F L +Q GR + E L HP Sbjct: 551 MQDAVTARVALEGELHKALDRQQFRLH------YQIQVDASGRPLGAEALIRWMHP--ER 602 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PPD++ + + V+ L L+ +VN+ L Sbjct: 603 GLVPPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLD 662 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ ++R L+ EL E + L T ++ E G LDDFGTG ++ Sbjct: 663 FVFQVRATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSS 722 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D IKI + + R + ++ + VI EGVET E+ + + Sbjct: 723 LQYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFL 782 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 Q++ QG+ +P P+E + Sbjct: 783 QDNGCTHFQGYLFGKPVPVEQFEAML 808 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 105/267 (39%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++V+QR+ + ++++ F L +QP G+++ E L HP Sbjct: 591 MNQKVLQRLDIENSLRRAIEKEEFVL------FYQPQIDIKTGKIVGFEALLRWYHPDY- 643 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + S + V++ + + +E L SVN+ Sbjct: 644 -GLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHL-ISVNLSARQFQRS 701 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 I R L E+ E + + + G + LDDFGTG + Sbjct: 702 NIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYS 761 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L ++ D +KI + +R + + + ++ L ++ V+ EGVET E+ Sbjct: 762 SLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLF 821 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ AQG+ S+P P E + + Sbjct: 822 LKKEKCDKAQGYLFSKPLPAEEIEKML 848 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 395 bits (1017), Expect = e-109, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 100/265 (37%), Gaps = 22/265 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M VI+R + L +++F L +QP + GR+ VE L HP+ Sbjct: 642 MEEAVIKRAKIEADLRQGLIKKQFLLH------YQPQIFSNGRMTGVEALVRWQHPV--R 693 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V++ LA+ A L +VN+ Sbjct: 694 GLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSVQQFHQPE 753 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 I I L+ EL E + M LDDFGTG ++ Sbjct: 754 FVDHIQEVIRVTGANPERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDDFGTGYSS 813 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D +KI + + P T+ +++L VI EGVET + + Sbjct: 814 LSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVETEAQRNFL 873 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTA 251 + S + QG+F SRP PIE Sbjct: 874 ETSGCHSCQGYFFSRPLPIEEFEEY 898 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 395 bits (1016), Expect = e-109, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 88/267 (32%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + ++++ + L +QP G + VE L HP Sbjct: 493 MNATAVNYLLLENDLRRAIEQNQLAL------YYQPQIDLKTGDMTGVEALVRWQHP--E 544 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++E D G +VN+ Sbjct: 545 RGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVG-KVAVNLSPRQFRQK 603 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMA 165 K+ ++ L E+ E + + + + G L +DDFGTG + Sbjct: 604 NFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYS 663 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L +KI R + + ++ L + V+ EGVET + Sbjct: 664 SLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEW 723 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ ++P + L + Sbjct: 724 LRAKGCDQVQGFLYAKPMTAKQLESHF 750 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 394 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 99/270 (36%), Gaps = 25/270 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M +I+ + + ++L++ F L +QP + GR++ E L HP Sbjct: 976 MNEHLIKTLEMENSLRQALEKNEFQL------YYQPKVEHATGRIIGCEALLRWRHP--Q 1027 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA- 113 +PP + + + V+ E + L +VNI Sbjct: 1028 RGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPP-LTMAVNISARQFYQG 1086 Query: 114 LRQQPKILRQIER----LPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGM 164 + +ER L EL E + + + T + + G L LDDFGTG Sbjct: 1087 ENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGY 1146 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + L D +KI R + + + + ++ + + + EGVE ++ Sbjct: 1147 SSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLA 1206 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 V N QG+ SRP P E LA Sbjct: 1207 LVANCGCNYIQGYLFSRPLPPEDFVALFLA 1236 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 96/267 (35%), Gaps = 22/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R +L +F L +QP G + VE L HP Sbjct: 1235 MQAVVTARAELENDLRTALAREQFMLH------YQPQIDRRGSVTGVEALVRWPHP--QR 1286 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+ LA+ L +VN+ Sbjct: 1287 GMVSPGEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEA 1346 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFGP-LWLDDFGTGMAN 166 ++R I L+ EL E + + T A++ G LDDFGTG ++ Sbjct: 1347 FVEDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSS 1406 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + L P + ++ L VI EGVET E+ + Sbjct: 1407 LSYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRL 1466 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 + + A QG+F SRP P L ++ Sbjct: 1467 EQAGCRAYQGYFFSRPLPETALEDFLV 1493 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 94/269 (34%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++++R+ + +L+ L +QP GR++ E L HP Sbjct: 820 MNERILERLELENSLRRALENDELELH------YQPKVSLRDGRVIGAEALIRWRHP--Q 871 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + VV L D + + +VN+ Sbjct: 872 LGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQ-ISVAVNVSARQFQHE 930 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + R + L E+ E + + T + G + LDDFGTG Sbjct: 931 QLTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYC 990 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D IKI R L S E + ++ L + + VI EGVE + Sbjct: 991 SLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDF 1050 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ SRP P + A Sbjct: 1051 LRRHGCDEMQGFLFSRPLPAAEFARLLAA 1079 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M +I R +++++ +F L +Q + G+ + E L HP Sbjct: 517 MQESIIARADMERDLRKAIEDNQFQLH------YQAQVSSSGQTLGAEALIRWQHP--ER 568 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 ++ P + + + V+ L + L+ +VNI L Sbjct: 569 GQVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQED 628 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ ++R L+ EL E + + S + + G LDDFGTG ++ Sbjct: 629 FVEQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSS 688 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L ++ + IKI + L R + ++ + + VI EGVET EE + + Sbjct: 689 LQYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYL 748 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ S+P PI + Sbjct: 749 LDNGCTHYQGYLFSKPVPINEFEVLL 774 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 393 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 95/267 (35%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q ++ + + +L+ F +QP GRL+ +E L HP Sbjct: 647 MNVQALEHLILENSLRRALERNEFV------IFYQPQMDLKSGRLVGMEALIRWQHP--D 698 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 LPP R+ + + ++ D L +VN+ G Sbjct: 699 LGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMP-LRVAVNLCGIQFRQK 757 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + I +++ L EL E + + K + E G L +DDFGTG + Sbjct: 758 KFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYS 817 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI R + +P+ + S ++ + + V EGVE + Sbjct: 818 SLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEF 877 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ LS P P + Sbjct: 878 LSTRNCNEIQGYLLSSPLPEAEFTRFL 904 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 99/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + + R++ +++++ +F L +Q R + E L HP Sbjct: 751 MQQSLSARLALELELRKAIEKDQFQL------YYQIQVDETHRPLGAEALLRWMHP--EH 802 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ L + L+ S+N+ Sbjct: 803 GLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPD 862 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFGP-LWLDDFGTGMAN 166 ++ ++ L+ EL E I L T +++ + G LDDFGTG ++ Sbjct: 863 FVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSS 922 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D +KI + + + S ++ + GVI EGVET E+ + + Sbjct: 923 LQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLL 982 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ S+P P+E + Sbjct: 983 LRKGCNHFQGYLFSKPVPVEQFEKLL 1008 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 22/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + V R++ +L + L +Q R + E L HP+ Sbjct: 870 MQQAVEARVTLENDLRHALPNDQLQL------YYQIQVDNDRRAIGAEALVRWIHPI--R 921 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+K LA AD + L+ +VN+ + Sbjct: 922 GMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQVG 981 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 I I L+ EL E + L S ++ G L +DDFGTG ++ Sbjct: 982 FVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSS 1041 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + + ++ + + VI EGVET + + Sbjct: 1042 LSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFL 1101 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 + + QG++ +PAPIE + + AL Sbjct: 1102 KQNGCMCYQGYYFGKPAPIEQFQSQLEAL 1130 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 392 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 97/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + +++ E++F L +Q GR E L HP Sbjct: 559 MQAAVTHRAALETELRKAIDEQQFHL------CFQVQMDQSGRPTGGEALLRWEHPT--R 610 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V+ LA + GL +VN+ R Sbjct: 611 GTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVNVSARQFRQAR 670 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 ++ + + L+ EL E + L A + + G LDDFGTG ++ Sbjct: 671 FTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSS 730 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + + +KI + + P + ++ L N VI EGVET +WR + Sbjct: 731 LAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFL 790 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 N QG+ RP P+ + Sbjct: 791 ANVGCKNYQGYLFGRPLPLLEFEQFL 816 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 392 bits (1008), Expect = e-108, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 99/268 (36%), Gaps = 24/268 (8%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNPS 60 I R++ ++++ F L +QP G ++ +E L HP Sbjct: 266 QSSAINRLNMESEMRKAIERGEFVLH------YQPQINATSGHVVGMEALIRWQHP--ER 317 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + + V+ E D + L +VN+ + Sbjct: 318 GMIPPYHFISVAEETGMIVPIGEWVMYEACRQNKAWHDAGL-AELKVAVNLSARQFSDRK 376 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 K+ +++ L E+ E + + + G L +DDFGTG ++ Sbjct: 377 LLDKVRHALKQSGLNPAFLELEITESVIMKDIEATIALLEEIASMGLSLAIDDFGTGYSS 436 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L D +KI + + S + + ++ L + VI EGVE E++ + Sbjct: 437 LNYLKRFPIDKLKIDKSFIDDVISSEDDGKIVEAIIGLSHNLKLNVICEGVEDAEQFAWL 496 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 Q QG++ S+P P + V + Sbjct: 497 QERQCNEIQGYYFSKPLPADEFEAFVRS 524 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 392 bits (1008), Expect = e-108, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 99/269 (36%), Gaps = 23/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R+ ++L+ F L +QP + GR++ E L HP Sbjct: 786 MNQYAQERLELELDLRKALERDEFVLH------YQPQFDPNGRIIGCEALIRWQHP--DK 837 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L P + ++ + V+ L SVN+ G + Sbjct: 838 GLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPA-LNISVNLSGRQFLHHD 896 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + I L EL E I + T ++ G + +DDFGTG ++ Sbjct: 897 LLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSS 956 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI + L Q E + ++ + + VI EGVET E+ + Sbjct: 957 MSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFL 1016 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 ++S QG++ SRP + + AL Sbjct: 1017 KSSRCEEFQGYYFSRPILAADIEQYLQAL 1045 >UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria RepID=A6SW06_JANMA Length = 459 Score = 391 bits (1007), Expect = e-108, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 102/268 (38%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R ++LQ+ + L +QP GR++ E L HP+ Sbjct: 178 MQADLSERNVMEADLRKALQDNQLML------YYQPQTGNDGRIVGAEALLRWRHPV--K 229 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+ L + L ++N+ Sbjct: 230 GMVSPADFIPLAEQTGLILPIGHWVLGMACAQLISWSKHPATAQLSLAINVSALQFKQPD 289 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 +++ ++R L EL E + + + ++ E G L LDDFGTG ++ Sbjct: 290 FVSQVVSVLDRSGADPHLLELELTESMLVNDVNDIIAKMNALKEKGLRLSLDDFGTGYSS 349 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D +KI + + T+ ++ L VI EGVET E+ + + Sbjct: 350 LSYLKKLPLDQLKIDQSFVRDMLFDSNDVTIVRTVVELARGMGLHVIAEGVETQEQRQFL 409 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ LSRP P VLA Sbjct: 410 AELGCLSFQGYLLSRPVPNAEFEAVVLA 437 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 102/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R+ + F L +QP GR+ VE L HP Sbjct: 431 MHEGARDRMFLEIDLRHATLRNEFVL------YYQPKASCADGRITGVEALLRWQHP--E 482 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD++ + + + V++E + + SVN+ L A Sbjct: 483 RGIVSPDQFIPLLEETGLIVQVGRWVLEEACRQAVEWQAAGLNIP-SVSVNLSARQLQAE 541 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + +E+ L E+ E + + T +++ + G + LDDFGTG + Sbjct: 542 TLLTDVAATLEKTGLNAACLDLEITESMLMDNADMAIQTLSALKKMGVTISLDDFGTGYS 601 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D IK+ R + + ++ ++ + + V+ EGVETPE+ Sbjct: 602 SLAYLKRFPLDAIKVDRSFVQDIAADSDDASITRAVITMAHHLKLKVVAEGVETPEQLAL 661 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + + QG+F SRP P + +++ Sbjct: 662 LISHQCDVIQGYFFSRPMPASGMTELLVS 690 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 99/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M R E +LQ+++F L +QP R+ AVE L HP + Sbjct: 1137 MNEAASDRRQLEEDLHLALQQKQFVLH------YQPQVDAQRRVFAVEALLRWQHPHH-- 1188 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP R+ + + V++ + + L +VN+ Sbjct: 1189 GLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQPD 1248 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 + + I+ L+ EL E + L ++ G +DDFGTG ++ Sbjct: 1249 FVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSS 1308 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L+ + D +KI R L ++ + ++ + V+ EGVET + + + Sbjct: 1309 LSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFL 1368 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ SRP ++ + Sbjct: 1369 DSHGCDGYQGFLFSRPLAVDAFEDFL 1394 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 94/266 (35%), Gaps = 24/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + + A +L+ L +QP T G+++ E L HP Sbjct: 685 MQLSASRNLQLENALRHALKRNELQL------YYQPQISTSNGQIIGAEALLRWHHP--E 736 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S ++ V++ I D + +VN+ Sbjct: 737 LGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMI-IAVNLSVVQFRQK 795 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I + +L EL E + + + E G + +DDFGTG + Sbjct: 796 NLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYS 855 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + +KI + + P+ R + S ++ + + I EGVET E+ Sbjct: 856 SLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAF 915 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTA 251 ++ QG++ S+P P Sbjct: 916 LRLHGCHEVQGYYFSKPLPSVEFEQF 941 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 91/269 (33%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + + +L+ L +QP + RL+ E L HP Sbjct: 1138 MQERSARNLQIENDLRRALENGELRLH------YQPQFTLADRRLVGAEALLRWQHP--Q 1189 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + V++ + L + + +VN+ Sbjct: 1190 LGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPP-MTVAVNLSAVQFRQA 1248 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + R ++ +L EL E + + +T + G + +DDFGTG + Sbjct: 1249 SLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYS 1308 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L R +KI R L PE + + + L I EGVE+ + Sbjct: 1309 SMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAF 1368 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ AQG+ SRP V A Sbjct: 1369 LRAKGCDEAQGYLFSRPLAPAQFAAFVRA 1397 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 389 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 99/267 (37%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++ + ++ + F +QP R++ E L HP + Sbjct: 947 MNINALEHMQLQGQLRHAIINQEFR------IYYQPQIDTLNERMIGAEALVRWQHPQH- 999 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ S + V+ E ++ +VN+ Sbjct: 1000 -GLVPPLKFIPLAERSGLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRG 1058 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 +++ +ER L EL E I L T + + G L +DDFGTG + Sbjct: 1059 NIVETVIQALERSGLPAENLELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFGTGYS 1118 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI + + PE + S ++ L + VI EGVET + + Sbjct: 1119 SLSYLKRLAVDKLKIDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQL 1178 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ QG+ SRP P E + Sbjct: 1179 LKSLECNEVQGYLFSRPIPAEDFSGLF 1205 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 389 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 92/269 (34%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +R+ ++ + + +QP GR++ E L Sbjct: 445 MNVVAKRRLELESFLRHAIDNKELSVN------YQPQIDIPTGRIIGAEALLRWN--SAE 496 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++E + + D + + +VNI Sbjct: 497 LGMVSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDDGLPE-IQIAVNISVQQFAKQ 555 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + + L E+ E++ + T + + G L +DDFGTG + Sbjct: 556 SLDKLVSKVLLETGLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYS 615 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + P + ++ + + VI EGVE + Sbjct: 616 SLSYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEF 675 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG++ SRP + + + Sbjct: 676 LRQHHCEEMQGYYFSRPLIASDMEALLRS 704 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 389 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 90/266 (33%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V + L+E +F + +QP R+ VE L HP Sbjct: 727 MQASVSANAALSTDLRAGLREHQFLVH------YQPQVDREQRITGVEALLRWKHP--QR 778 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+++ LA GL +VN+ Sbjct: 779 GMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPD 838 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 ++ I+ L+ EL E + + ++ G L LDDFG G ++ Sbjct: 839 FVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSS 898 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P + S ++ L VI EGVET + + Sbjct: 899 LSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFL 958 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ P PI + Sbjct: 959 AGLGCGYYQGFLFCPPLPIAEFEAFM 984 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 92/262 (35%), Gaps = 23/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M +R++ +++ L +QPI G + A E L HP Sbjct: 317 MNAASAERLTLEAELRHAVERGELRL------FYQPIVDPDGTVRAAEALVRWQHP--EQ 368 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L PDR+ + + V+ E D E SVN+ R Sbjct: 369 GLLAPDRFIPLADETGLITEIGAWVLTEACYQGRCWHDAGHER-FRVSVNVSAVQFGQPR 427 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + + L E+ E + S+ G + +DDFGTG ++ Sbjct: 428 LLETVREALRGSGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSS 487 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + + E + ++ L + G + EGVET E+ + Sbjct: 488 LSYLRRLPIDTVKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATL 547 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + + QG+ RP P E Sbjct: 548 RREGCDSFQGYRYGRPVPAEVF 569 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 388 bits (999), Expect = e-107, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 100/269 (37%), Gaps = 22/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R A +L+ + F L +Q + GR + E L + Sbjct: 782 MQEILEKRGQLETALRGALERKEFLLH------YQLQMDSSGRPIGAEALLRWNN--AKL 833 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ S + V++ LA+ + L +VN+ Sbjct: 834 GSVSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAA 893 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 K+ +++ L+ EL E + L + ++ G +DDFGTG ++ Sbjct: 894 FVAKVRNVLQQSGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSS 953 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S LS + D +KI + + + ++ + VI EGVET E+ + Sbjct: 954 LSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFL 1013 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 A QG+ ++P PIE L + L Sbjct: 1014 DLRGCQAYQGYLYAKPMPIEELEIKLAQL 1042 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 388 bits (999), Expect = e-107, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 88/264 (33%), Gaps = 22/264 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M QV R + + + QPI RL E L HP+ Sbjct: 844 MQAQVTARSQLESDLRQGIARHELTVHL------QPIVDGSTRLCGAEALVRWRHPV--K 895 Query: 61 QRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ + L + A +VN+ Sbjct: 896 GLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNVSARQFRQPD 955 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 ++L + L+ EL E + L A + G LDDFGTG ++ Sbjct: 956 FVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSS 1015 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P + +L L V+ EGVET + + Sbjct: 1016 LSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFL 1075 Query: 227 QNSPAFAAQGWFLSRPAPIETLNT 250 + QG+ RP P+E Sbjct: 1076 KLHGCEGFQGYLFGRPVPLEAFER 1099 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 388 bits (998), Expect = e-107, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 93/264 (35%), Gaps = 22/264 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R+ E L+ F+L +QP GRL+ E L +P Sbjct: 686 MQALIADRVEMEEDLRNGLRNDEFFL------CYQPQVDNQGRLLGAEALLRWRNPK--R 737 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + S + V+ L A + L +VN+ L + Sbjct: 738 GMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMD 797 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 +I+ + L+ EL E + + + G +DDFG G ++ Sbjct: 798 FVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSS 857 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P + ++ L VI EGVET + + Sbjct: 858 LSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFL 917 Query: 227 QNSPAFAAQGWFLSRPAPIETLNT 250 N A QG+ S+P P + Sbjct: 918 DNYGCDAYQGYLFSKPVPADEFER 941 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 387 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 95/267 (35%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIY-QTCGRLMAVELLTVVTHPLNP 59 M + R++ E+++ +F L +QP RL E L H + Sbjct: 655 MQAAITSRVALEADLREAVEAGQFQL------YYQPQVVGESHRLTGAEALLRWHH--SR 706 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + + V++ LA A L +VN+ + Sbjct: 707 RGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQT 766 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMA 165 ++L + L+ EL E + + + G LDDFGTG + Sbjct: 767 DFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYS 826 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI + + + ++ L VI EGVET E+ Sbjct: 827 SLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNF 886 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + S A QG+ S+P P+ + Sbjct: 887 LAESGCHAYQGYLFSKPLPLAGFEQWI 913 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 387 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 100/268 (37%), Gaps = 25/268 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + R+ +L+E++F L +QP + +L+ VE L HP Sbjct: 362 MHHKSSTRLLLETELRVALEEKQFEL------YYQPQFSLPDCKLVGVEALIRWHHP--Q 413 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 L P + + + V++E + + L SVN+ G Sbjct: 414 RGLLCPSSFIPVAEETGLIVRIGEWVLREACRQAMEWKALGVP--LRMSVNLSGRQFRQE 471 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + + IER L E+ E + + A + G L +DDFGTG + Sbjct: 472 NLVQTMTKIIERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYS 531 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L +KI R + P+ + + + + + V+ EGVET + + Sbjct: 532 SMAYLKRFPVSRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQF 591 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ + QG+ SRP + V+ Sbjct: 592 LREQGSDMVQGYLFSRPVSAREMAELVI 619 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 387 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 98/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M R +RI +L ++ L +QP G ++ +E L P Sbjct: 433 MNRMAWERIEIETGLRRALDLQQLALH------YQPQVDLKTGHIIGMEALLRWESP--E 484 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 R+ P R+ + + V++ L +VNI Sbjct: 485 LGRVSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFP-SLRMAVNISARQFKQA 543 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 ++ I+R L EL E + + K T + G L +DDFGTG + Sbjct: 544 GFIDRLDAIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYS 603 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 S L D IK+ R + ++ + + ++ + + VI EG+ET E+ Sbjct: 604 MLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAF 663 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 +++ QG++ RP P+ET + Sbjct: 664 LKDRACEEGQGYYFGRPVPVETAAEILA 691 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 387 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 98/263 (37%), Gaps = 23/263 (8%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIY-QTCGRLMAVELLTVVTHPLNPS 60 Q+++ I ++++ + + +QP + R++ VE L HP Sbjct: 549 DAQLLENIEIERDLRKAIERKELVV------YYQPQFHSESNRMIGVEALVRWNHPT--K 600 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L P + + + V++E + Q D + SVN+ Sbjct: 601 GMLSPGVFIPIAEETGLIYEIGTWVLREACRQMKQWHDKG-GPLIPVSVNLSSHQFHQRN 659 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLP---KDSTFASMCEFG-PLWLDDFGTGMANF 167 I +E L E+ E + + S + + G + LDDFGTG ++ Sbjct: 660 LVQYIKNILEETKLAPHFLELEITESMMMDPAVSISILHELNKIGTRISLDDFGTGYSSL 719 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L + +KI R L ++ + + + ++ + VI EG+ET ++ + Sbjct: 720 SYLKKFPIHKLKIDRSFITDLSRNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILT 779 Query: 228 NSPAFAAQGWFLSRPAPIETLNT 250 + QG++ SRP + Sbjct: 780 ENHCKEIQGYYYSRPLSANEVEQ 802 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 101/268 (37%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + +R+ A ++L +F L +QP G+++ E L HP Sbjct: 1037 MQARSARRLLLENALRQALSRNQFELH------YQPQISMQDGKIVGAEALLRWYHP--E 1088 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V++ + + + D + ++N+ Sbjct: 1089 LGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPP-VTVAINLSAVQFRQA 1147 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 R +++ + W+ EL E + + + G + +DDFGTG + Sbjct: 1148 RLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYS 1207 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + + +KI + L E R + + ++ L + I EGVET + Sbjct: 1208 SLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAF 1267 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ QG++ SRP + VL Sbjct: 1268 LRLQGCNEVQGYYFSRPLTVALFEAFVL 1295 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 98/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++R+ +L++ F L +QP G ++ E L P Sbjct: 559 MNTRAVRRLFIEGNLRRALRQGEFML------YYQPKIDLASGMMIGSEALIRWQDP--E 610 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P ++ S + V++E + + + + SVNI Sbjct: 611 HGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVA-VPVSVNISAVEFRHK 669 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + ++ +L EL E I + ++ G L +DDFGTG + Sbjct: 670 DFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYS 729 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI + + P+ ++ ++ + + V+ EGVET E+ Sbjct: 730 SLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAF 789 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ QG+ RP P + +L Sbjct: 790 LRTLHCDEGQGFLFGRPLPADEFARLLL 817 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 101/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R + EA +++E +F L +Q GR+ E+L HP Sbjct: 692 MEIALRERAAIEEALRYAIEEEQFLLH------YQAQIGEDGRIEGAEVLLRWQHP--ER 743 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+K+ LA+ A+ + GL+ +VN+ L Sbjct: 744 GMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQLRQPD 803 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDST----FASMCEFGP-LWLDDFGTGMAN 166 ++ + L+ EL E + + S+ G LDDFGTG ++ Sbjct: 804 FVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTGYSS 863 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI + + + S ++ L GVI EGVET + + Sbjct: 864 LSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEAQRELL 923 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ SRP PI V Sbjct: 924 AGIGCHCYQGYLFSRPLPIGDFERLV 949 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 100/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + ++ A +L+ + L +QP GR++ E L +HP Sbjct: 596 MQARSERTLTLENALRRALERNQLQLH------YQPQISLASGRVVGAEALLRWSHP--E 647 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + V++ + L D + + SVN+ Sbjct: 648 LGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLP-IALSVNLSSVQFRHA 706 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + + L EL E++ + + ++ E G + +DDFGTG + Sbjct: 707 DLPELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYS 766 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + R IKI + + + + + + ++ + I EGVET + Sbjct: 767 SLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEF 826 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG++ SRP P+E + Sbjct: 827 LKAKGCTEVQGYYFSRPLPVEQFEAFM 853 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 89/268 (33%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M +R+ + L +QP T G ++ E L HP Sbjct: 757 MNAAAAERLQLQGELRNAHLRGEIMLH------YQPQIDVTDGHVVGCEALMRWKHPT-- 808 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ S + ++E + L +VN+ G Sbjct: 809 LGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPP-LTVAVNLSGCQFQQS 867 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + L EL E I + T + G L +DDFGTG + Sbjct: 868 NFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYS 927 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + + P + ++ L +I EGVET + Sbjct: 928 SLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDY 987 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + + QG++ SRP P E + T + Sbjct: 988 LHAAGVDFIQGYYFSRPLPAEDMATYLA 1015 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 385 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 96/268 (35%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q + +++ F L +QP Y +++ +E L HP Sbjct: 1069 MHEQAHDILLLESELRSAIEHEEFLL------YYQPQYDSKTSKIIGLEALIRWQHP--E 1120 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V++ + LA + + + +VN+ Sbjct: 1121 KGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGA-VPVAVNLSVVQFHQD 1179 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + + L EL E I + + G L +DDFGTG + Sbjct: 1180 TLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYS 1239 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + D +KI + + P+ + + ++ + I EGVET E+ Sbjct: 1240 SLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNF 1299 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + + QG++ S+P P + + Sbjct: 1300 LIANSCDEIQGYYFSKPLPSTEVTKLLA 1327 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 385 bits (990), Expect = e-106, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +R++ A ++L F L +QP + RL+ +E L HP Sbjct: 698 MSAVATERLALENALHQALSNGEFRL------YYQPQIEVCSRRLIGLEALIRWRHP--E 749 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP R+ + + V++E + + + +VN+ L Sbjct: 750 VGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGL-CIVPVAVNLSPLQLQKD 808 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 ++ + L EL E + + E G +DDFGTG + Sbjct: 809 DFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYS 868 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L+ D +KI + + + + + ++ L + V+ EGVET E+ Sbjct: 869 SLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEF 928 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ + AQG++ SRP P + + + Sbjct: 929 LERAGCDGAQGFYFSRPVPADEIAGWL 955 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 385 bits (990), Expect = e-106, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 97/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + + ++ A +++ + + +QP + R++ E L HP Sbjct: 625 LNERASELLALEGALRQAVDKNHLVV------YFQPQVELASRRIIGAEALVRWQHP--E 676 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + + P + + + V+++ Q + SVN+ Sbjct: 677 NGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPP-MRISVNMSARQFRQK 735 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 P + R ++ +L E+ E I + + G L +DDFGTG + Sbjct: 736 DLVPMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYS 795 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + Y+KI R + P + + ++ L VI EG+E ++ + Sbjct: 796 SLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQF 855 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + + QG+ SRP P ++ Sbjct: 856 LLDRGCGYGQGYLFSRPIPAHEFEQLLV 883 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 385 bits (990), Expect = e-106, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + +R+ E E+L F L +QP GR+ A E L HP+ Sbjct: 510 MAARAHERLQWQEELREALAGEEFLLH------FQPQMNLGTGRIFAAEALLRWNHPV-- 561 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + ++ L D + L+ SVN+ Sbjct: 562 RGIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPP-LIISVNVSARQFRER 620 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 ++ ++ L EL E + + +T ++ G L +DDFGTG + Sbjct: 621 NWASRVAEILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYS 680 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + SAL +KI R + + + S ++ L + VI EGVE+ + Sbjct: 681 SLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEF 740 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +Q + QG+F SRP E + + + Sbjct: 741 LQKAGCDEIQGYFFSRPLSAEAFESLLSS 769 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 92/266 (34%), Gaps = 24/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + +V R+S + ++L+ F L +QP GRL +E L + Sbjct: 375 LNERVASRMSMEKHLRKALENEEFELW------YQPQADLNTGRLSGMEGLIRWRN--AE 426 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + VV+ + D + L +VN+ Sbjct: 427 LGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSP-LTVAVNLSPRQFRDR 485 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I + L E+VE + + + G L +DDFGTG + Sbjct: 486 ELTGVIAGVLRETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYS 545 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI + P + ++ + + V+ EGVET + Sbjct: 546 SLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEF 605 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTA 251 ++ QG++LSRP P Sbjct: 606 LRAHGCNEIQGYYLSRPLPAAEFEGM 631 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 384 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 96/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M++ V+ R + +L+ L +QP+ G ++ E L HP Sbjct: 589 MLQAVLARAALESELRLALESDELLLH------YQPLVNGDGSMLGAEALVRWRHP--QR 640 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + V++ L + L+ +VN+ Sbjct: 641 GLVMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWSRSAATAQLVLAVNVSVRQFRQPD 700 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 ++L+ + R L+ EL E + + + G +DDFGTG ++ Sbjct: 701 FVDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGTGYSS 760 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI + + P + +L L V+ EGVET + + + Sbjct: 761 LAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQLKFL 820 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 Q A QG RPAP L A+ Sbjct: 821 QRHGCKAFQGHLFGRPAPAAVLERAL 846 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 384 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + A +L + L +QP T G ++ E L HP Sbjct: 887 MQAHSARTLQLGNALRHALTRGQLHLH------YQPQISTQDGHVVGAEALLRWQHP--E 938 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + ++ V++ I L D + + +VN+ Sbjct: 939 LGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMI-MAVNLSAAQFRQS 997 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + ++ +L EL E + + + G + +DDFGTG + Sbjct: 998 NLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYS 1057 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI + + P+ + + + ++++ + I EGVET + Sbjct: 1058 SLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSF 1117 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG++ S+P P E + + Sbjct: 1118 LRLQGCNEVQGYYFSKPLPAEQFVSYL 1144 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 102/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 + + +RIS A ++L+ +F L +QP R++ E L HP Sbjct: 669 LDDSLKERISLENALNQALKLGQFEL------YYQPQLDVKSNRIIGAEALIRWNHP--E 720 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD + S + V+ + LAQ + L SVN+ + Sbjct: 721 KGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQ-LSVSVNLSALQVQKE 779 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 ++ I L EL E + + + G + +DDFGTG + Sbjct: 780 SFAREVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYS 839 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + + + ++ + + VI EGVET + Sbjct: 840 SLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLEL 899 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +++ QG+ ++P P+E + +LA Sbjct: 900 LRDYGCEQYQGYLFAKPLPVEQMTEHLLA 928 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 95/268 (35%), Gaps = 23/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M ++R++ +++ F L +QP ++ G ++ E L HP Sbjct: 481 MNAHALERLALENDLHRAVERGEFRLM------FQPQFEGSGSIIGAEALLRWQHP--QR 532 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ + D ++ + SVNI Sbjct: 533 GLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKK-ITVSVNISALQFSQKN 591 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 I R + L EL E + + + + E G + +DDFGTG ++ Sbjct: 592 LLELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSS 651 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L +KI + L + + ++ L VI EGVET ++ + Sbjct: 652 LSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFL 711 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 Q QG F S+P E + A Sbjct: 712 QAQCCDEFQGHFFSQPVSPEKFAELLRA 739 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 98/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R + +S++ R F L +Q R + E L HP Sbjct: 870 MQDTLNTRTALEADLRKSIERREFNL------FYQIQVDEMNRPVGAEALIRWIHPK--R 921 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++E L + + L+ +VN+ Sbjct: 922 GMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSD 981 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ +E+ L+ EL E + ++ E G LDDFGTG ++ Sbjct: 982 FATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSS 1041 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + ++ + +KI + L + + + ++ + VI EGVET E+ + + Sbjct: 1042 LQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLL 1101 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 N QG+ S+P PI + + Sbjct: 1102 LNKGCTHFQGYLFSKPLPIREFDALL 1127 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 96/269 (35%), Gaps = 23/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + R++ +++ F L +QP GR ++ E L P Sbjct: 789 MFTAALGRMTMKNRLRRAVELEEFEL------YYQPKIAADGRTVVGAEALIRWVQPER- 841 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V+++ + L +VN+ Sbjct: 842 GGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPP-LRIAVNLSAVQFKQP 900 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 +I ++ L E+ E + + +T + + G L LDDFGTG + Sbjct: 901 GLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTGYS 960 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI RE L E R + ++ L + V+ EGVE ++ Sbjct: 961 SLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQVAF 1020 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ SRP P + + + Sbjct: 1021 LRQRGCDVFQGYHFSRPLPAKEFEQFLRS 1049 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 383 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 94/269 (34%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + ++R+ +L+ F L +QP + GR L E L HP Sbjct: 1147 MNARALERLELESDLRRALELGEFVLH------YQPQFTGDGRRLTGAEALLRWQHPR-- 1198 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + + ++ E L + SVN+ Sbjct: 1199 RGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVP-KVSVNLSARQFADG 1257 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + +I + L EL E I + + + + G + +DDFGTG + Sbjct: 1258 QLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYS 1317 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + D +KI R L + + ++ + + VI EGVE+ + Sbjct: 1318 SLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDF 1377 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ RP P E + Sbjct: 1378 LREHGCDEVQGYLFGRPMPAEQFGMLYAS 1406 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 383 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 98/270 (36%), Gaps = 24/270 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + +R+ +L+ F+L +QP + G + +E L HP Sbjct: 692 LNMRATERLLLESTMRRALEREEFFL------VYQPQMELRSGHIAGIEALLRWRHP--D 743 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP+ + + + V+ E + + L +VN+ Sbjct: 744 LGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEG-QPPLRMAVNVSARQFRQR 802 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 +I + + L EL E + T + + G L +DDFGTG + Sbjct: 803 NLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYS 862 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + + T+ ++ L + V+ EG+E E+ Sbjct: 863 SLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEF 922 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 + QG++LSRP E T + L Sbjct: 923 MHQRHCDTMQGYYLSRPVTAEEFGTFLKRL 952 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 95/264 (35%), Gaps = 22/264 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R + E ++L+ L +QP + G L+ E L HP Sbjct: 976 MQALITKRAAMEEDLRQALRRDEMRL------YYQPQVDSQGSLLGAEALVRWEHP--QQ 1027 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L P + + + V++ L A GL+ SVN+ L Sbjct: 1028 GLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHD 1087 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 ++ ++ L+ EL E + + G +DDFGTG ++ Sbjct: 1088 FIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSS 1147 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + +KI R + ++ ++ L + V+ EGVE+ E+ + + Sbjct: 1148 LAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFL 1207 Query: 227 QNSPAFAAQGWFLSRPAPIETLNT 250 + QG+ RP P E L Sbjct: 1208 EKHGCLEYQGYLFGRPQPAEQLER 1231 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 98/262 (37%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M +V++ + +L F L +QP G+L E L HP Sbjct: 651 MQAKVLEHAAMANDIRHALTRNEFTL------YYQPQVTHDGQLTGAEALIRWQHPK--Q 702 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+ + +LA + + L+ ++NI Sbjct: 703 GTISPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTG 762 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 ++L ++R L+ EL E + + T M + LDDFGTG ++ Sbjct: 763 FVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSS 822 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI + L + + ++ L VI EGVET E+ + Sbjct: 823 LNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLAL 882 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + QG+ SRP P+E Sbjct: 883 ASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_Q220B0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B0_RHOFD Length = 701 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 91/266 (34%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 + + R + E L + F L +Q G E L HP+ Sbjct: 439 LQALALARTALEENLRRGLALQEFVLH------YQIQVDHQGLPTGAEALLRWQHPV--R 490 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP ++ + + V++ L + +VN+ Sbjct: 491 GMVPPAQFIPLAEETGFILPLGQWVLESACRQLVAWSHQRATGSWTLAVNVSALQFAQPD 550 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + ++ L+ EL E + + ++ G LDDFGTG ++ Sbjct: 551 FVAHVTSALQATSANPTLLKLELTESMLVGDVQDVITKMNALKAQGVSFALDDFGTGYSS 610 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + L +P + ++ L + VI EGVET + + Sbjct: 611 LSYLKRLPLDQLKIDQSFVRDLLINPNDAVIAQTIVALGHNLGLQVIAEGVETVGQHDYL 670 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + A QG++ RP P L + Sbjct: 671 ASIGCDAFQGYYFGRPVPAAELACLL 696 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 96/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V+ + E+++ +F L +Q ++ VE L HP+ Sbjct: 792 MQTAVMAMAALEADLREAVRSNQFLL------YYQAQVSGERQVAGVEALVRWQHPV--R 843 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V++ LA A L +VN+ Sbjct: 844 GLVPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWASQPERAHLTVAVNVSALQFHQAD 903 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 ++L ++R L+ EL E + + ++ E G LDDFGTG ++ Sbjct: 904 FVAQVLAALKRAGANPQRLKLELTESLLVHDAEDVIAKMITLKEQGVGFSLDDFGTGYSS 963 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + + +KI + + + ++ L + VI EGVET + + Sbjct: 964 LSYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVALADTLGLSVIAEGVETEAQRDFL 1023 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 A QG SR PI+ + Sbjct: 1024 AAQGCHAYQGHLYSRALPIDAFEAFM 1049 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 382 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 102/268 (38%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R + ++L + L +Q + + + E+L HP+N Sbjct: 658 MQDTISSRANLEAELRKALANEQLQLH------YQIQVDSAHQTIGAEVLLRWIHPVN-- 709 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ + + V++ L + D L+ ++N+ Sbjct: 710 GIISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFHQNG 769 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 ++ IER L+ EL E + L +T S+ EFG LDDFGTG ++ Sbjct: 770 FATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSS 829 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + +KI + L + + ++ + + VI EGVET + + + Sbjct: 830 LQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQRQIL 889 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ +P PIE + + + Sbjct: 890 LKNQCSHFQGYLFGKPMPIEQFESLLSS 917 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 382 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 58/270 (21%), Positives = 96/270 (35%), Gaps = 25/270 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC--GRLMAVELLTVVTHPLN 58 M + + A +L+ L +QP GR+ VE L HP Sbjct: 775 MQLRSAHTLRLETALRRALERNELVLH------YQPQIDLVDFGRVAGVEALIRWQHP-- 826 Query: 59 PSQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA 113 + P + + + V++ + L ++ G VN+ Sbjct: 827 EFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLG-QVGVNLSAHQFRQ 885 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGM 164 + R + L EL E + + ++ G + +DDFGTG Sbjct: 886 QNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGY 945 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + L R D +KI + L Q PEG + ++ L I EGVE PE+ Sbjct: 946 SSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLA 1005 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ S QG+ SRP P + L + A Sbjct: 1006 FLRASGCQEVQGYLFSRPLPPDELAVWLRA 1035 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + ++++ + L +QP Y G+L+ +E L HP Sbjct: 442 MNEKAQGLLWLETELRLAIEQEQLELH------YQPQYDLNTGQLVGMEALVRWNHP--E 493 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + + + V+ +A I + +VNI + Sbjct: 494 KGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGISP-IRMAVNISAVQFYRI 552 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + + ++ L E+ E + + T + G L +DDFGTG + Sbjct: 553 DLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYS 612 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI R + + + + ++ L V+ EGVET E+ Sbjct: 613 SLSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSF 672 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q QG+ +RP P + + + Sbjct: 673 LQRHACQYGQGYLFNRPLPAKDIERQL 699 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 98/269 (36%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + R+ +L + F L +QP G + +E L + Sbjct: 572 MNASTLARLRLESNLHRALARQEFQLH------FQPKVDLAHGHIYGMEALLRWR--SHE 623 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S+ + V+++ + + G +VN+ + Sbjct: 624 LGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPG-TVAVNLSSKQMTQG 682 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + R +E +L E+ E + + T ++ G + +DDFGTG + Sbjct: 683 DIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYS 742 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L ++ D +KI R L + + + S ++ + + EGVE E + Sbjct: 743 SLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQF 802 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + + QG+ SRP P T+ +L Sbjct: 803 LLDHGCQYGQGYLFSRPVPAATMEQLLLE 831 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 97/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + + + ++LQ F L +QP + G++ E L HP Sbjct: 499 MDTRAHKALELEGDLRQALQLGSFVLH------YQPKVKIASGKIDGCEALVRWNHP--D 550 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD + + + V++E + + +VN+ + Sbjct: 551 KGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPP-IKIAVNLSARQFLQS 609 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I + WL EL E + + A + + G L LDDFGTG + Sbjct: 610 DFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYS 669 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + + ++ + ++ + + I EGVET E++ Sbjct: 670 SLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAF 729 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + + QG+ S+P P L + Sbjct: 730 LAMCECDSIQGYLFSKPLPANDLAALLA 757 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 382 bits (982), Expect = e-105, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 90/266 (33%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + ++ F L +Q G L E L HP Sbjct: 909 MQAVVTSRAALEAGLRRAVTSDEFLL------YYQAQVDGQGHLTGCEALLRWQHP--ER 960 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+ LAQ A L +VN+ Sbjct: 961 GLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQAD 1020 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 ++L ++ L+ EL E + + + + E G LDDFGTG ++ Sbjct: 1021 FVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYSS 1080 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P + ++ L + VI EGVE + + Sbjct: 1081 LSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFL 1140 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 A QG+ RP P++ V Sbjct: 1141 ARLGCHACQGYLFCRPLPLDQFEAFV 1166 >UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASF8_PELPD Length = 1023 Score = 382 bits (982), Expect = e-105, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 105/267 (39%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M R+ ++R + + ++ F+L +QP + +L VE L P Sbjct: 374 MNRKAMERFAIETCMLRAIDAGEFFL------CYQPKVEIHDMKLTGVEALVRWQRP--G 425 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PPDR+ + + ++ E D + + SVNI L Sbjct: 426 EGVIPPDRFIALAEENGMIVRLGGWILGEACRQNRAWQDAGLPRTV-VSVNISARQLREN 484 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMA 165 ++ R +E L EL E + + + + G + +DDFGTG + Sbjct: 485 SFVEQVERILEETGLEPCYLDLELTESVVMANSDEIVQKLTRLKQLGVGISVDDFGTGYS 544 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D IK+ R + P+ + + ++ + + VI EGVET E+ Sbjct: 545 SLSYLKHLPVDTIKVDRSFVRDIVHDPDDKAIVEAVIAMGHALGLTVIAEGVETLEQLEF 604 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ AQG++ S+P L + Sbjct: 605 LRSQNCNQAQGYYFSKPLDSGHLARFL 631 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 382 bits (982), Expect = e-105, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 96/268 (35%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q ++R++ L+ F +QP+ R + VE L HP Sbjct: 486 MYAQAVERLALERDLRHGLERGEFQ------IYYQPVLDVRTRRPVEVEALVRWHHP--E 537 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLL-ASVNIDGPTLIA 113 + P + + + V+ E LA F + SVN+ Sbjct: 538 RGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFRH 597 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGM 164 I + + L+ E+ E + + + + G L +DDFGTG Sbjct: 598 PSLTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTGY 657 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L D +KI R L QS E + L ++ N V VEGVET E+ Sbjct: 658 SSLSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQLE 717 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ + P P + + + Sbjct: 718 FLERVGCDLVQGFLFAPPMPPDEVARFL 745 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 381 bits (981), Expect = e-105, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 95/268 (35%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R LQE +F L +QP GRL+ VE L HPL Sbjct: 774 MQAVISARAEMEADMRLGLQENQFLL------YYQPQVNHAGRLIGVEALVRWQHPL--R 825 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ L L +VN+ Sbjct: 826 GLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIAVNVSALQFHGES 885 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 +L + R L+ EL E + + ++ G LDDFGTG ++ Sbjct: 886 FVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVGFSLDDFGTGYSS 945 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D IKI + +P+ L + + VI EGVET + + Sbjct: 946 LSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGMMVIAEGVETQMQRDFL 1005 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+F RP P+ L ++A Sbjct: 1006 EGEGCLNFQGYFFGRPVPVAELACFLVA 1033 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 381 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 89/267 (33%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M V R+ +++ F L +QP +++ E L Sbjct: 440 MNSSVTDRLELLNRLRQAITNEDFVLH------YQPKVSLASHQIIGAEALVRWN--SAH 491 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 S + P + + + V++ D + SVN+ L Sbjct: 492 SGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPP-IPISVNLSPRQLARG 550 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + R + L E+ E + + G + LDDFGTG + Sbjct: 551 DIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYS 610 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI + + + + ++ L V+ EG+ET ++++ Sbjct: 611 SLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQF 670 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+ +S+P P + + Sbjct: 671 LLANGCDEGQGYLMSKPVPNKNFVDLL 697 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 98/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + + L + +QP+ RL+ VE L HP+ Sbjct: 569 MQAAVNARSNLEADLRQGLARGELCV------YYQPVVDHRARLLGVEALVRWRHPV--R 620 Query: 61 QRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ L + + L SVN+ Sbjct: 621 GMISPADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPG 680 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 ++L+ ++ L+ EL E + L + T A M + LDDFGTG ++ Sbjct: 681 FVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSS 740 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + P + +L L V+ EGVET + + Sbjct: 741 LSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFL 800 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ RP P+E ++ + Sbjct: 801 RLHGCEGFQGYLFGRPGPVEDIDAYL 826 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 100/268 (37%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M ++ Q + +++ + +F L +QP GR++ E L HP Sbjct: 671 MQAELEQASALVVDLRQAIWQGQFQLH------YQPQTANDGRIIGAEALLRWRHP--ER 722 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ S+ + V++E LA AD +VN+ Sbjct: 723 GPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWADLPAAGNCKLAVNVSARQFRQPE 782 Query: 116 QQPKILRQIERLP----WLRFELVEHIRL----PKDSTFASMCEFGP-LWLDDFGTGMAN 166 +I R + L+ EL E I + S + + G +DDFGTG ++ Sbjct: 783 FVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQELRDLGIGFSMDDFGTGYSS 842 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + + +KI R L P + ++ + VI EGVET E+ + Sbjct: 843 LAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKEQLATL 902 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 A QG+ SRP P + + Sbjct: 903 ARYGCDAYQGYLFSRPVPAAQFAHLLTS 930 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 91/269 (33%), Gaps = 25/269 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M + ++R+ A +++ L +QP R E L HP Sbjct: 828 MNTRALERLLLENALRRAIERNELTLH------YQPQVAATSDRPNGCEALVRWQHP--D 879 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ S + V++E + A + L+ VNI Sbjct: 880 FGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGL--HLMVGVNISALQFRRA 937 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDSTF----ASMCEFG-PLWLDDFGTGMA 165 +++ + + E+ E + + G L LDDFGTG + Sbjct: 938 DFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYS 997 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + +KI R L PE + + L L V+ EGVET + Sbjct: 998 SLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDF 1057 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ SRP + + A Sbjct: 1058 LVARGCHTLQGYLYSRPLDVAAFEAWMQA 1086 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 91/266 (34%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R+ ++L + F L +Q R + E L HP Sbjct: 993 MQEGIQARVDMEHELRKALDKNEFQL------FYQMQVGLSDRAVGAEALIRWIHP--ER 1044 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP+ + + + V+ L + L SVN+ Sbjct: 1045 GLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLKRWEQSERTRSLTLSVNVSAKQFRQAD 1104 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ I R L+ EL E L ++ + G LDDFGTG ++ Sbjct: 1105 FVEQVTTAIARHGINPMLLKLELTESALLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSS 1164 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + +KI R + S + + ++ + + VI EGVET + + Sbjct: 1165 LQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGIL 1224 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 +S QG+ S P PI+ + Sbjct: 1225 LDSGCMHYQGYLFSEPVPIDAFEALL 1250 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 98/267 (36%), Gaps = 24/267 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQ 61 + +R+ +L F L +Q GRL+ E L Sbjct: 806 QTARERLGLEARLHRALASEEFVLH------YQAQIDMRDGRLIGCEALVRWH--SATEG 857 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + PDR+ + + V+++ + L +VN+ G L + Sbjct: 858 LVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLT-DLTVAVNLSGRQLRSPDL 916 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMANF 167 ++ R + L+ EL E + + + ++ G L +DDFGTG ++ Sbjct: 917 VERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSL 976 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L + D +KI R+ + + + + ++ + VI EGVETPE+ + Sbjct: 977 AYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLI 1036 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 A QG+ RP P E + A Sbjct: 1037 RQGCTAGQGYLFGRPLPAEAFAQVMRA 1063 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 102/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M +R+ E+L F L +QP+ T + E L HP Sbjct: 589 MTAAAAERLHLENDLREALLRGEFEL------YYQPVLDTERLTVCGAEALLRWHHP--E 640 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + +PPDR+ + + V++E A+ + G+ SVN+ G Sbjct: 641 AGLIPPDRFIPLAEETGLIRPIGTWVLREACAQAARWRRLGLT-GMTVSVNVSGEQFWRD 699 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLP---KDST-FASMCEFGP-LWLDDFGTGMA 165 + + +E L E+ E + + T + G L LDDFGTG + Sbjct: 700 ELPQAVRQALEAQALAPDALVLEITESVLMHGSANTETRLRELKAMGVGLSLDDFGTGYS 759 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI + + + RTL ++ + + V+ EGVE+ E Sbjct: 760 SLSYLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPL 819 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ + QG+ SRP P L+ + Sbjct: 820 LRRARCDRVQGYHFSRPLPARALSRWI 846 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 93/263 (35%), Gaps = 22/263 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + + L + +QP+ RLM E L HP Sbjct: 590 MQAAVNARSNLEADLRQGLARAELLV------YYQPVVDHQARLMGAEALVRWRHP--QR 641 Query: 61 QRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ L + + GL SVN+ Sbjct: 642 GMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQFRQPG 701 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS-TFASMCEFGP----LWLDDFGTGMAN 166 ++L Q++ L+ EL E + L T A M + LDDFGTG ++ Sbjct: 702 FVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSS 761 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D IKI + + P + +L L V+ EGVET + + Sbjct: 762 LSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFL 821 Query: 227 QNSPAFAAQGWFLSRPAPIETLN 249 Q QG+ RP P+E Sbjct: 822 QLHGCEGFQGYLFGRPVPMEVFA 844 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 93/267 (34%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V +R + L + L +QP GR+ E L HP Sbjct: 785 MQAAVSERAALEADLRAGLDAGQLEL------FYQPKVDQ-GRITGAEALVRWRHP--DR 835 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + V++ LAQ + + L +VN+ Sbjct: 836 GFISPAEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGELTVAVNVSPRQFHEGS 895 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 P++L + LR EL E + L + +G LDDFGTG ++ Sbjct: 896 FVPQVLEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGYGVGFSLDDFGTGYSS 955 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + +KI + + P + ++ L V+ EGVET + + Sbjct: 956 LAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLRVVAEGVETEAQRAFL 1015 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 + + A QG+ LS P VL Sbjct: 1016 ERNGCHAWQGYLLSPPLQAAAFEALVL 1042 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M +V +R+S +L F L +QP T GR++ VE L P Sbjct: 599 MNSRVSERLSMETGLRHALARNEFLLH------YQPRVNTTTGRIVGVEALIRWQQP--Q 650 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD + + + V++ + + SVNI Sbjct: 651 KGLILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGF-AQMRISVNISCRQFTHD 709 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I + L E+ E + + + E G + +DDFGTG + Sbjct: 710 NLPDTIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYS 769 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI + + + TL + +++L + G++ EGVE E+ Sbjct: 770 SLSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHF 829 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG++ S+P P ETL + Sbjct: 830 LEERNCQEVQGYYFSKPLPAETLQPLL 856 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 104/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R+ + +++ +L + F L +QP + + G+++ +E L HP Sbjct: 600 MHREALNQLTLEADLRRALIKEEFLL------YYQPQVEISTGKIVGLEALIRWQHPT-- 651 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PPD++ + V++ + + +VN+ Sbjct: 652 LGFVPPDQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPP-VRIAVNLSARQFHQS 710 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + IL+ +E +L E+ E + T + E G + +DDFGTG + Sbjct: 711 QLINIILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYS 770 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + +KI R + ++ + ++ L V+ EGVETP++ Sbjct: 771 SLNVLKHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSF 830 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ AQG++ P P + + Sbjct: 831 LRSIHCDLAQGYYFCPPVPAIEIAKLL 857 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 103/269 (38%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +V S + +L+ +LQ +QP G L VE L HP+ Sbjct: 659 MNFRVDLLFSMEKDLRLALERGELFLQ------YQPQADLASGTLSGVEALIRWDHPV-- 710 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 ++ P + + ++ V++ +A+ + H L +VN+ L Sbjct: 711 KGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGM-HDLTIAVNLSIRQLRQP 769 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 I + L E+ E I + + + M + G L +DDFGTG + Sbjct: 770 DLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFS 829 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L ++ + +KI + + + ++ L +R VI EGVET E+ Sbjct: 830 SLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDF 889 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+F SRP E V A Sbjct: 890 LRIRGCDEIQGYFYSRPLLAEDFMRFVKA 918 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 96/269 (35%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M V R+ +L+ L +QP G ++ VE L HP+ Sbjct: 601 MNLTVQARLVLESDLRTALERDEMMLH------YQPQIDLKSGEVVGVEALLRWRHPV-- 652 Query: 60 SQRLPPDRYFTEITVSHRMEVVKE-----QIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD + + + + E + LA + L +VN+ Sbjct: 653 RGAVAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGLSP-LRMAVNLSARQFKQS 711 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + + L E+ E + +T ++ E G L +DDFGTG + Sbjct: 712 NLPSLLADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYS 771 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI R + E + + + L + + V+ EGVET + R Sbjct: 772 SLSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRF 831 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+F S P + + + A Sbjct: 832 LRGQQCDILQGYFFSEPLSAAGIASYLAA 860 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 95/267 (35%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M R+ R+ +L + F + +QP ++ E L P Sbjct: 283 MNRKAKSRLELEGRMRRALANQEFVV------FYQPKVSADRDAIVGAEALIRWMDP--E 334 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + S ++ V+++ + + SVN+ + Sbjct: 335 RGMVPPGEFIPVAEESGQIEPIGTWVLRQSCIQNRLWQEAGFNP-IKVSVNVSARQFRSP 393 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFGP-LWLDDFGTGMA 165 + ++ WL E+ E + + T ++ + G L +DDFGTG + Sbjct: 394 SLLQTVTEVLDSTGLDPKWLELEITESMLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYS 453 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI R + +P+ + ++ L V+ EG E E Sbjct: 454 SLSYLGRFPITTLKIDRAFIADVDTNPKTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMF 513 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++N+ QG++ SRP P + + Sbjct: 514 LRNNGCDTVQGFYYSRPVPADEFERMM 540 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 98/266 (36%), Gaps = 22/266 (8%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQ 61 + + +R +++ +++ L +Q + G ++ E L HP+ Sbjct: 755 QKIINERAELEIELRKAVDKKQLHLH------YQIQLNSVGTPLSAEALIRWVHPV--RG 806 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P + + + V+ L D L +VN+ Sbjct: 807 LISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNF 866 Query: 117 QPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANF 167 + ++R L+ EL E + + T ++ E G LDDFGTG ++ Sbjct: 867 VALVKETVQRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLDDFGTGYSSL 926 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 L + + +KI + L S R + ++ + VI EGVET E+ +Q Sbjct: 927 QYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQ 986 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVL 253 + QG+ +P PIE L+ + Sbjct: 987 DIGCNYYQGYLFGKPMPIEQLDAILA 1012 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 97/261 (37%), Gaps = 25/261 (9%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNPSQ 61 R +R+ A L+ F L +QP+ G ++ E L HP Sbjct: 559 RAAHERLGLEAALRRGLERGEFVLH------FQPVVALDKGEVVGAEALVRWNHPTE--G 610 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P R+ + + V++ + D L +VN+ A Sbjct: 611 MIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCG--RPLTIAVNLSTRQFRAGDL 668 Query: 117 QPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANF 167 + ++R L E+ E + T A++ G L +DDFGTG ++ Sbjct: 669 TATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSL 728 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L D +KI R + R + + ++ + ++ GVI EGVET E+ ++ Sbjct: 729 AYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLR 788 Query: 228 NSPAFAAQGWFLSRPAPIETL 248 + A QG+ + RP Sbjct: 789 SLGCEAYQGYLVGRPQAAADF 809 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 379 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 95/269 (35%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +R+S A ++L F + +QP G ++ +E L Sbjct: 586 MDADAARRLSIESALRDALARDEFCVH------YQPQVSLDSGHMIGMEALLRWN--SAL 637 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++ D + L +VN+ Sbjct: 638 LGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLP-LHVAVNLSPRQFRQA 696 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 ++ + L E+ E + + + G L LDDFGTG + Sbjct: 697 DLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYS 756 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + +S +D IKI + + +P + S + + V+ EGVET + Sbjct: 757 SLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAF 816 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +++ A QG+ SRP P E +L+ Sbjct: 817 LRSRRCDAIQGYLFSRPLPPEEFAPLLLS 845 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 379 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 88/265 (33%), Gaps = 22/265 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R E+L+ F L +Q G + E L HP Sbjct: 785 MQAVVAARAELEVDLREALRLGAFELH------YQAQVDARGCVSGAEALLRWQHP--QR 836 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+ L + L +VN+ Sbjct: 837 GWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFRQAD 896 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 ++L IER L+ EL E + L +++ G LDDFGTG ++ Sbjct: 897 FAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSS 956 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D IKI + + ++ +L L V+ EGVET + + Sbjct: 957 LAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFL 1016 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTA 251 A QG+ +RP P Sbjct: 1017 AEHGCQAYQGYLFNRPQPARQFEAW 1041 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 379 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 85/263 (32%), Gaps = 24/263 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +R++ +L +QP G L E L HP Sbjct: 434 MDHHARRRLTVESELRRALAGGELEAH------YQPQVDLATGALTGAEALVRWRHP--E 485 Query: 60 SQRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 L P + + + V++ + + L +VN+ G Sbjct: 486 RCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRP-DLKVAVNLSGHQFRQH 544 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 ++ + L E+ E + + T A + G L +DDFGTG + Sbjct: 545 DLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYS 604 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + + + ++ + ++ EGVETP + Sbjct: 605 SLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREF 664 Query: 226 VQNSPAFAAQGWFLSRPAPIETL 248 + + QG+ R P E Sbjct: 665 LVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 379 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 95/266 (35%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + RI+ ++++ +F L +Q + R++ E L T+P Sbjct: 328 MQESINARITLENELRIAIEKSQFHL------YYQIQMDSDNRVLGAEALIRWTNP--EH 379 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ + L +VN+ Sbjct: 380 GLVLPATFIPIAEETGLILSIGKWVIETACAQIKVWQKKSQTRDLTLAVNVSAKQFRQKD 439 Query: 116 QQPKILRQIERL----PWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 ++ ++R L+ EL E + ++ + G LDDFGTG ++ Sbjct: 440 FVDQVQSAVQRHAIPGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSS 499 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D KI + + + + ++ + VI EGVET E+ + + Sbjct: 500 LQYLKRLPLDQFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLL 559 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ S+P PI+ + + Sbjct: 560 LGKGCTLYQGYLFSKPIPIDQFDALI 585 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 379 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 93/269 (34%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R R+ ++ F L +QP + G L +E L HP Sbjct: 549 MNRAATARLDLERKLRGAVARGEFELW------YQPQFDSRHGHLTGLEALVRWRHP--Q 600 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + + V++E Q D + L SVN+ L Sbjct: 601 DGLIAPLRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPE-LRISVNLSVRQLREK 659 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + R L E+ E + ++ G + +DDFGTG + Sbjct: 660 CLVDTVWTTLAASGLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHS 719 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D++KI R + + + + L + VI EGVE+ + Sbjct: 720 SLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVAR 779 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ SRP + + + + Sbjct: 780 LRELGCDELQGFHFSRPVTADVVENLLRS 808 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 379 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 100/262 (38%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V + + +++ ++F L +QP + G+++ E L HP Sbjct: 556 MQEVVNAKSVMEASMRQAITGQQFVL------FYQPQINSNGQIIGAEALVRWRHP--QK 607 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P+++ + + V++ + L + A + +VN+ + Sbjct: 608 GLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQPATAQITMAVNVSARQFHQID 667 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ R I + L+ EL E + + ++ + G LDDFGTG ++ Sbjct: 668 LVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSS 727 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI + + + ++ L VI EGVE E+ + + Sbjct: 728 LAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQML 787 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + QG+ RP PIE Sbjct: 788 IDMGCRVFQGYLFGRPVPIEEF 809 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 87/264 (32%), Gaps = 18/264 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ R S +L + F L +QP GR E L HP Sbjct: 536 MNARMQARRSLELDLRRALARQEFEL------YFQPQVDARTGRFDGAEALIRWHHP--E 587 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + + E + A L +VN+ R Sbjct: 588 RGLVSPGEFIPLAEETGLIGPLGEWVLRTACAEARRWATPLPVAVNLSPVQFRDPRLAAT 647 Query: 120 ILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 + + L E+ E + + + + G + +DDFGTG ++ S L Sbjct: 648 VRGILAETGLPGSRLEIEITEGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYL 707 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI + Q + + + L EGVET ++ + Sbjct: 708 RRFPFDKIKIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEG 767 Query: 231 AFAAQGWFLSRPAPIETLNTAVLA 254 QG+ SRP P E++ A Sbjct: 768 CDQLQGYLYSRPVPAESIAELFRA 791 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 103/266 (38%), Gaps = 23/266 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQ 61 + V +++ +L + F L +QP G ++ VE L HP Sbjct: 544 QAVNDKMNIQNELNRALARQEFLLH------YQPQVSAKSGAIVGVEALIRWDHP--ERG 595 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 L PD++ + + + V++ Q D ++ L +VN+ + Sbjct: 596 LLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKP-LRVAVNLSARQFLKQDF 654 Query: 117 QPKILRQIERL----PWLRFELVEHIRLP---KDSTFASMCEFG-PLWLDDFGTGMANFS 168 I + + +L E+ E + + + G + +DDFGTG ++ Sbjct: 655 TQMIAEILHQTRLAPEYLELEITESSMIDVHRATQALKELKQLGVHVAIDDFGTGYSSLY 714 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 L E + +KI R + + P + + S ++ + + VI EGVET EE +Q Sbjct: 715 YLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQE 774 Query: 229 SPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ SRP P E + + A Sbjct: 775 HLCEEVQGYLFSRPLPSEDVAFYLQA 800 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 91/259 (35%), Gaps = 24/259 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++ + +L+ + F + +QPI G L E L HP Sbjct: 444 MHARALELLRLENDLRRALERQEFEV------YYQPITSLVTGMLTGFEALVRWRHP--E 495 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 + P + + + V+ E L F L SVN+ G + Sbjct: 496 LGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHTQFPTPEPLKMSVNLSGKQIKE 555 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEF-GPLWLDDFGTGM 164 +I + L+ E+ E I + T + L +DDFGTG Sbjct: 556 PDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTKMLLQLRARNIQLSVDDFGTGY 615 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + +KI R + + ++ L + VI EGVET E+ Sbjct: 616 SSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIITLAHSLRMDVIAEGVETLEQLT 675 Query: 225 DVQNSPAFAAQGWFLSRPA 243 +++ QG+ S+P Sbjct: 676 ELKLLNCEQGQGYLFSKPL 694 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M +V++ +++ F L +QP G+++ E L HP Sbjct: 487 MNERVMEIAELESKLRRAVERNEFVL------YYQPKIDIRTGQVVGAEALIRWQHPSW- 539 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PDR+ S + V++E + + + +VN+ L Sbjct: 540 -GLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLAR-IPVAVNLSTVQLRQH 597 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 ++ + +L E+ E + + ++ + G L LDDFGTG + Sbjct: 598 NFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYS 657 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + +KI + + P+ T+ + ++ + + VI EGVE + Sbjct: 658 SLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEF 717 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ SRP P + + Sbjct: 718 LKKEGCDQMQGFIASRPVPADEFALLL 744 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 379 bits (974), Expect = e-104, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q I+R+ ++L+ F L +QPI RL A+E+L HP Sbjct: 812 MNAQAIERLQLERGLRQALERGEFELH------FQPIVAAATYRLEALEVLLRWRHP--E 863 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + + V+++ LA+ + ++N+ Sbjct: 864 LGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVP-RLAINLSARQFEQQ 922 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 ++ + L E+ E + + S + G L +DDFGTG + Sbjct: 923 GLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYS 982 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R L + + +L + + V+ EGVET + Sbjct: 983 SLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAF 1042 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ SRP P L + Sbjct: 1043 LCAKGCQLLQGYLFSRPLPAAELPAFL 1069 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 379 bits (974), Expect = e-104, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 25/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + + +++ ++L E++F L +QP G+++ +E L HP Sbjct: 549 LHQVLAKKLQLERELRKALDEKQFTLH------YQPKIHLQTGQIIGMEALIRWDHP--D 600 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ + + V++ + L +VNI + Sbjct: 601 LGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQ-LAVAVNISLRQFMQN 659 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLP---KDSTFASMCEFG-PLWLDDFGTGMAN 166 I +E L E+ E + L + G + +DDFGTG ++ Sbjct: 660 NLIEMITSILEETGLAPQYLELEITESMALNVDYTIRILNRLKALGVSISIDDFGTGYSS 719 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S LS+ D +KI + L +P+ + + ++H+ + VI EGVET E + Sbjct: 720 LSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFL 777 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+F S+P P + +++ + Sbjct: 778 KEQLCNEVQGYFYSKPLPTKEIDSFL 803 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 379 bits (974), Expect = e-104, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + + + +L F L +QP G ++ E L HP Sbjct: 672 LNARAREILEIESQLRYALDRDEFVLH------YQPQVDLKTGEIIGAEALIRWQHP--E 723 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 L P R+ + V++E LAQ + + +VN+ Sbjct: 724 LGLLGPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPR-ISLAVNLSTLQFRQQ 782 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + R + L E+ E + + T + G L +DDFGTG + Sbjct: 783 DLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYS 842 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI R + + + ++++ VI EGVET E+W+ Sbjct: 843 SLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKF 902 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + AAQG+ L++P P + + Sbjct: 903 LDREGCHAAQGYLLAKPVPAKEFERLL 929 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 379 bits (974), Expect = e-104, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 24/267 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQ 61 R QR+ +L+ L +QP + R++ E L P + Sbjct: 837 RAAEQRLDLEVRLQRALRLNELCL------YFQPQIDISSNRIIGAEALVRWQDPAH--G 888 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P ++ + + V+ E + + + +VNI Sbjct: 889 LISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPA-INLAVNISPVQFRNSNI 947 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANF 167 + +++ + L EL E + + +++ ++G L +DDFGTG ++ Sbjct: 948 LESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYSSL 1007 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L D +KI + + + + + ++ + + V+ EGVET E+ ++ Sbjct: 1008 AYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTFLK 1067 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ +S P P + + A Sbjct: 1068 EQGCDCYQGYLMSPPVPADQFEQLLRA 1094 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + + ++ +L+ F L +QP + GR++ E L HP Sbjct: 670 LNARAREILAIESQLRFALERDEFVLH------YQPQVEMESGRIVGAEALIRWNHPS-- 721 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 L P R+ + V+ E L + + L ++N+ Sbjct: 722 LGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPE-LTLAINLSALQFRQP 780 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 ++ + +E L E+ E I + T +M G L +DDFGTG + Sbjct: 781 DLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYS 840 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI R + Q + + ++++ V+ EGVET E+W+ Sbjct: 841 SLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQF 900 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ +++P P + + Sbjct: 901 LEQEGCDFVQGYLIAKPLPADDFAELL 927 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + A +++ + + + +QP G ++ E L HP Sbjct: 596 MQAYSTRYLQVLNALRQAIAQEQLHVH------YQPQISLISGDVIGAEALLRWHHP--E 647 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V++ + + ++ L+ +VN+ Sbjct: 648 LGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDK-LIIAVNLSAVQFRHA 706 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 +++ ++ +L EL E + + + S+ E G + +DDFGTG + Sbjct: 707 GLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYS 766 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + +KI + + E + + S ++ + I EGVET E+ Sbjct: 767 SLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAF 826 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ AQG+ S+P P T +L Sbjct: 827 LREEGCHEAQGYHYSKPLPAADFETFIL 854 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 377 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 103/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + R+ I+R +++++ F+L +QP GR++A+E L HP Sbjct: 359 LHRRTIERHKLEVGLRRAVRKKEFFL------VYQPQVDLGTGRIVALEALVRWQHP--E 410 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + L P + + + +++ Q + + +VN Sbjct: 411 AGVLLPSTFIPVAEETGLIHIMGEWILRTACHQAMQWQRMGLPP-MRIAVNFSARQFRQP 469 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMC-EFGPLWLDDFGTGMA 165 +I + + L E+ E + + T + + +DDFGTG + Sbjct: 470 DLVERIEQILLESGLPPHHLELEITESVFMENLESAIETLVDLKTRAIQIAIDDFGTGYS 529 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KIA++ + + T+ ++ + NR V+ EGVET E+ Sbjct: 530 SLNYLKNFPLDRLKIAQDFVRDIPDDEDDATIIETIMAMANRLGIKVLAEGVETMEQVTF 589 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG++ +RP E + + Sbjct: 590 LRRKGCHEMQGFYFARPMQAEEIAGFL 616 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 377 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 95/267 (35%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + R+ +L + F L +QP+ G ++ VE L HP Sbjct: 320 MNTTTLDRLLMESNLRRALVQNEFILH------YQPLVNLETGLIIGVEALIRWLHP--E 371 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PDR+ + + V+ E D + + +VN+ Sbjct: 372 LGLIMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPP-ICMAVNVAPVQFRQA 430 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + L EL E + T +++ G L LDDFGTG + Sbjct: 431 GFVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYS 490 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L +KI R L P+ + S ++ + V+ EGVE E+ Sbjct: 491 SLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLAL 550 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ AQG++ SRP + + + Sbjct: 551 LRKMGCDMAQGYYFSRPMSADGMADML 577 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 377 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 91/268 (33%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++ ++ + R L +QP G+++ E L + HP Sbjct: 878 MNEHAHKLLTMGAELRNAISQNRLVLH------YQPQVDIITGQIIGAEALIRINHP--E 929 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + + V++E + Q L ++N+ L Sbjct: 930 RGIISPGEFISVAEETGLIIPMGTWVIREACRQMQQWH-LDKNIELTIAINLSPLQLHQS 988 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + + L E E + + G L +DDFGTG + Sbjct: 989 DLPEIVSLALHDSGLNARYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYS 1048 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI + + Q P + ++ L I EGVET + Sbjct: 1049 SLSYLKQFPVDKLKIDQSFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVETEAQLGY 1108 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 +++ QG+ S P P E ++ Sbjct: 1109 LRSVNCKEMQGYLYSAPLPAEEFAALLV 1136 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 377 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 98/267 (36%), Gaps = 26/267 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + + I ++L++ +QP ++ VE L H Sbjct: 670 MDTRTFESIKLENDLYKALEQEELV------IYYQPQINGKTNKIEGVEALIRWNH--QE 721 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PPD++ + + V+KE L + D + SVN+ L Sbjct: 722 HGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQG-SPLISMSVNLSARQLEQS 780 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + +E +++ EL E++ + T + G L +DDFGTG + Sbjct: 781 DLFAMVKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYS 840 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L ++ +KI + + + + + ++ L VI EGVET E+ Sbjct: 841 SLGYLKKLPISTLKIDKSFVQDMTKD--DAAITNTIITLAKNLNLDVIAEGVETKEQVEF 898 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+F SRP E + Sbjct: 899 LSARNCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 90/246 (36%), Gaps = 24/246 (9%) Query: 22 RRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRM-- 78 F L +QP G+++ +E L P +PP ++ S + Sbjct: 790 NEFLLH------YQPQVDIETGQVVGMEALVRWHDP--EVGLIPPSQFIPVAEESGLIGP 841 Query: 79 ---EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPW----LR 131 V++E D + SVN+ +++ +E L Sbjct: 842 LSEWVLREACRQNKAWQDEGLPPA-RVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLE 900 Query: 132 FELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFV 186 EL E + + G L +DDFGTG ++ S L D +KI R Sbjct: 901 LELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVS 960 Query: 187 MLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 + +S + T+ S ++ L + VI EGVET + ++ QG+F ++P P Sbjct: 961 DIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHH 1020 Query: 247 TLNTAV 252 + + Sbjct: 1021 AIPGML 1026 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 89/267 (33%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + +R+ + L L +QP + G+L+ +E L HP Sbjct: 307 MNKAAFERLMLENQLRKVLSNNELIL------YYQPQIELSSGQLVGMEALLRWQHP--E 358 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 P ++ + V++ + SVN+ Sbjct: 359 FGICSPVKFVPVAEEMGLIVPIGEWVLRTACQQNQTWQQLGFPP-VRVSVNVSSRQFFRD 417 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 I + L EL E + + ++ + G + +DDFGTG + Sbjct: 418 NLLQIIKEALADSNLNPIYLELELTESVLMAEESGIFELLTEVQNMGVHIAIDDFGTGYS 477 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + + + ++ + + V+ EGVET + Sbjct: 478 SLSYLKRFPLDVLKIDRSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVETQGQLTF 537 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q QG++ SRP E + + Sbjct: 538 LQQQHCDVIQGYYFSRPICSEKMTQTL 564 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 93/269 (34%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ +R+ +L L +QP G ++ E L HP Sbjct: 734 MNVRMAERLRLESDLRWALSRNELLLH------YQPQVDINSGEIIGFESLLRWQHP--E 785 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V++E D + + +VN+ Sbjct: 786 LGMVSPVNFIPLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKV-VAVNLSAVQFHGA 844 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMA 165 + + ++ +L E+ E + + + G L +DDFGTG + Sbjct: 845 DIVALVSQSLQNSGLEARYLELEITESVIIEDPERVIRIMDELKMLGVGLSIDDFGTGYS 904 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D IKI R L + + ++ + R VI EGVET E+ Sbjct: 905 SLSYLKRFPIDKIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVIAEGVETVEQLEF 964 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +++ QG++ S P + V + Sbjct: 965 LRSHHCDEYQGFYCSPGVPAGEIPDLVAS 993 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +V+QR S + +L+ + F L +QP G + +E L HP Sbjct: 499 MNERVLQRQSLESSLRLALERQEFLLH------YQPKMNLETGHITGMEALIRWRHP--E 550 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + M V++E + + + + +VN+ Sbjct: 551 LGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGLNP-VPVAVNVSAVEFRRK 609 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 ++ + +L EL E + + + ++ G L +DDFGTG + Sbjct: 610 HFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYS 669 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L+ + D +KI R + + + S ++ + VI EGVET E+ Sbjct: 670 SLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLAL 729 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ QG++ SRP + + + Sbjct: 730 LRSHCCAEGQGYYFSRPVSVPAVAELL 756 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 96/268 (35%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + + + +L + L +QP G+++ VE L HP Sbjct: 327 MQENIEHKTTMEHELRMALSKEELIL------FYQPQVNLEGKIVGVEALLRWNHP--QK 378 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP+ + + + V+ L++ F L S+N+ Sbjct: 379 GLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEAS 438 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRL----PKDSTFASMCEFGP-LWLDDFGTGMAN 166 + I ++ EL E + L + ++ G LDDFGTG ++ Sbjct: 439 FYETVANAIALSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSS 498 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + + ++ + + + VI EGVE E++ + Sbjct: 499 LSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFL 558 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ +P P E L LA Sbjct: 559 MENGCGLFQGYLFGKPMPPEELERLFLA 586 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 93/266 (34%), Gaps = 24/266 (9%) Query: 4 QVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQR 62 +R+ +L L +QP+ G ++ VE L P Sbjct: 529 AANERLIMENRLRYALSAEELILH------YQPLVDARTGYVVGVEALVRWQPP--GKAM 580 Query: 63 LPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQ 117 +PP ++ + + V++ D + L+ +VN+ + Sbjct: 581 VPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSP-LVMAVNLSVRQFQSENLV 639 Query: 118 PKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFS 168 + R +E +L EL E + + T + G L +DDFGTG ++ Sbjct: 640 GMVQRILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLI 699 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 L D +KI + L R + + ++ + GV+ EG+E+ E+ ++ Sbjct: 700 YLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQ 759 Query: 229 SPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ RP P L + Sbjct: 760 QDCDYYQGYLFHRPVPAIELEAWLRE 785 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 93/266 (34%), Gaps = 24/266 (9%) Query: 4 QVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNPSQR 62 +R+ ++L F L +QP+ G++M VE L P Sbjct: 861 AANERLVLETQLRQALSAGEFVLH------YQPLIDARKGQVMGVEALVRWQPP--DKAM 912 Query: 63 LPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQ 117 + P ++ + + V++ D L+ +VN+ + Sbjct: 913 VSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPP-LVMAVNLSVRQFQSENLV 971 Query: 118 PKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFS 168 I + +E L EL E + + ++ G L +DDFGTG ++ + Sbjct: 972 ELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLT 1031 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 L D +KI + L P R + + ++ + V+ EGVE+ ++ + Sbjct: 1032 YLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQ 1091 Query: 229 SPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ RP P + L Sbjct: 1092 HGCDYYQGYLFHRPVPAQELEVWFRE 1117 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 66/274 (24%), Positives = 100/274 (36%), Gaps = 28/274 (10%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + ++R +++ R F L +QPI RL+ E L HP Sbjct: 446 MHTRAVKRWQLESDLRWAIERREFCL------VYQPIVSIQTERLIGFEALVRWHHP--Q 497 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFF-----IEHGLLASVNIDGP 109 + P + + + + V+ E L Q F E L SVN+ Sbjct: 498 RGWISPAEFISVAEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVSVNLSSK 557 Query: 110 TLIALRQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDF 160 I + +++ L+ EL E I + ST + E G L LDDF Sbjct: 558 QFCQPDLIHYIQQVLQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGIQLALDDF 617 Query: 161 GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETP 220 GTG ++ S L D +KI R + E + +L L V+ EGVET Sbjct: 618 GTGYSSLSYLHRFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVVAEGVETQ 677 Query: 221 EEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + +Q AQG+ +SRP E + Sbjct: 678 AQLDHLQALQCGYAQGYLISRPLTPEKTEQFLQE 711 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 93/269 (34%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M R +R++ ++ L +QP ++ VE L HP + Sbjct: 563 MNRTAAERLNIERKLRHAIARNELSL------VFQPQFRAEDTTPTGVEALLRWHHPTD- 615 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + + V+ +A+ + ++ L +VN+ L Sbjct: 616 -GMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKP-LRIAVNVSARQLRRR 673 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKD-STFASMCEFGP----LWLDDFGTGMA 165 + + L E+ E + + G L +DDFGTG + Sbjct: 674 DFCETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYS 733 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D++KI R + R + + L + VI EGVET ++ Sbjct: 734 SLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHEL 793 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ + QG+ S+P + A Sbjct: 794 LRANGCDEVQGFLFSKPLTGAAAFAFLHA 822 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 94/268 (35%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + RI ++ + F L +QP + G+L+ +E L HP Sbjct: 449 LNTASLARILLESGLRNAVDRQEFLL------FYQPQMELATGKLIGMEALIRWQHP--E 500 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + +KE D L SVN+ G Sbjct: 501 QGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQ-TGVPLRISVNLSGIQFRLP 559 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGPL-WLDDFGTGMA 165 ++R + L EL E I + + FG L +DDFGTG + Sbjct: 560 DFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFS 619 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI + + PE + ++L + VI EGVE E+ Sbjct: 620 SLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEF 679 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + QG+F RP + +L Sbjct: 680 LAQESCDEIQGYFYGRPLSGDKFEMFML 707 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 87/266 (32%), Gaps = 24/266 (9%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPS 60 ++ ++ +++ F L +QP +++ E + HP Sbjct: 854 NTNSVELLTLENNLRRAVERNEFVLH------YQPKVDLRSQKIIGAEAVVRWQHP--EL 905 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 L P ++ + + +++E + + +VN+ Sbjct: 906 GMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQL-TGQNVRVAVNLSARQFRDET 964 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + I + L E+ E + + + G + +DDFGTG ++ Sbjct: 965 LRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSS 1024 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 F L D +KI R + + + ++ + + V+ EGVET E+ + Sbjct: 1025 FGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFL 1084 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ S P + Sbjct: 1085 KKQGCDQIQGFLFSEPLHSHDFVRML 1110 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 91/262 (34%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V + LQ F L +Q + GR E L H Sbjct: 633 MQAAVTTHAELAKEIRLGLQRHEFVLH------YQVQIDSQGRCTGAEALVRWNH--RVR 684 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ L + + + +VN+ L Sbjct: 685 GLVSPAHFIPLAEETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQPE 744 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + ++R L+ EL E + + ++ E G LDDFGTG ++ Sbjct: 745 FVASVREALQRSGAPAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSS 804 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI + + P + ++ L + VI EGVET E+ + Sbjct: 805 LSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDAL 864 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 A QG++ RPAP + L Sbjct: 865 AAMQCDAFQGYYFGRPAPADAL 886 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 376 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 104/269 (38%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + V++R+ +++ +F L +QP + GR++ VE L HP Sbjct: 949 MNQSVLKRLQFDHDLRVAVEAGQFELH------YQPQINSTSGRVVKVEALVRWQHPRE- 1001 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V+ E L D I L +VN+ L + Sbjct: 1002 -GLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGIT-DLTVAVNLSAHQLHSP 1059 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 P + R + L E+ E + + + ++ + G L +DDFGTG + Sbjct: 1060 ALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYS 1119 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +K+ + + +P + + + L + V+ EG+ET + R Sbjct: 1120 SLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRL 1179 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + + QG+ S P P E + Sbjct: 1180 LASHRCDFMQGYLFSAPLPAERALAYIRE 1208 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 376 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 97/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R+ ++R+ ++ +++ + +QP G++ +E L HP Sbjct: 675 MNRKALERLKLETFLRVAIVQQQL------SVYYQPKVSVLSGKMTGMEALLRWQHP--E 726 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V+++ + + +VN+ L Sbjct: 727 LGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDI-VPIAVNLSARQLKQD 785 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 +++ + L E+ E + + + + G L LDDFGTG + Sbjct: 786 NFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYS 845 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI + + P ++ S L + V EGVET E+ Sbjct: 846 SLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDF 905 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ QG+ SRP P + L Sbjct: 906 IRMLNCEEYQGYLFSRPIPASEVVKYFL 933 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 376 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 94/266 (35%), Gaps = 22/266 (8%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQ 61 V R A +L+E +F L QP R+ E L HP Sbjct: 514 QAAVTLRADLEAALRTALEEEQFVL------YLQPQISEDVRVTGAEALIRWQHPT--RG 565 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P + + V+ LA A + +VN+ Sbjct: 566 LVMPGEFIAVAEDCGMIVPIGNWVLNTACKQLALWATQPAFAHMTIAVNVSAKQFHQHDF 625 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMANF 167 ++L + R L+ E+ E + + + G +DDFGTG ++ Sbjct: 626 VEQVLDALSRHGAQASGLKIEITESMLIANVDDVIVRMEELQHHGVGFAMDDFGTGYSSL 685 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L + D +KI + + + + ++ L N VI EGVET E+ + + Sbjct: 686 TYLKRLPLDVLKIDQSFVRDVLVDTNDAAIANMIVALANSMGLSVIAEGVETVEQMQYLA 745 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVL 253 A QG+ SRP P+E T++ Sbjct: 746 RHGCHAYQGYLFSRPVPVERFETSLA 771 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 376 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + A +L F L +QP G ++ E L HP Sbjct: 775 MQTHSARTLQLVNALRHALPRHEFELH------FQPQVALQDGHIVGAEALLRWRHP--E 826 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S ++ V++ + L Q D + ++ +VN+ Sbjct: 827 LGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGL-RPMVIAVNLSAVQFRHP 885 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + R ++ +L EL E + + + E G + +DDFGTG + Sbjct: 886 NLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYS 945 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + + +KI + + P+ + + + +++L + I EGVET + Sbjct: 946 SLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAF 1005 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+++S+P P + V Sbjct: 1006 LRLQGCDEVQGYYVSKPLPKDQFEAFV 1032 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 100/262 (38%), Gaps = 23/262 (8%) Query: 7 QRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPP 65 +R++ ++Q + F L +QP Y G ++ VE L HP +PP Sbjct: 377 ERLTLQHEMYRAIQRKEFIL------LYQPQYDLVSGMMVGVEALVRWRHPA--KGMIPP 428 Query: 66 DRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI 120 + S + V++E D + + SVN+ + K+ Sbjct: 429 GEFIPIAEESGMIVQIGDWVLEEACRQNKAWQDAGLPP-MPVSVNLSIRQFVQQDLASKV 487 Query: 121 LRQIERLPW----LRFELVEHIRLPKDST---FASMCEFGP-LWLDDFGTGMANFSALSE 172 +E+ L E+ E + + + + G + +DDFGTG ++F L Sbjct: 488 ASVLEKTGLKPEYLDLEITESMTMDTGHVSRCLLELTDMGVGISVDDFGTGYSSFHYLKN 547 Query: 173 VRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAF 232 D +KI R ++Q P + + ++ + + VI EGVE E+ ++ Sbjct: 548 FPIDRLKIDRSFVRDIQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRKHNCD 607 Query: 233 AAQGWFLSRPAPIETLNTAVLA 254 QG+F S P + + A Sbjct: 608 EMQGYFWSPPVSSTDIEQMLGA 629 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 100/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++R+ +L++ L +QP G + +E L HP Sbjct: 1218 METAAVKRLGLEAELRRALEQNELAL------YYQPQINLGTGEIATLETLIRWHHP--E 1269 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + + +++E + +VN+ G L Sbjct: 1270 HGLIPPSEFIPLAEETGLIASIGAWILREACTQMQSWLQRGFGP-FHIAVNVSGRELERE 1328 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 KI+ ++ WL E+ E + + F + E G +DDFGTG + Sbjct: 1329 DLVDKIVTILKETGLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYS 1388 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + +P+ + ++ L + V+ EGVET + Sbjct: 1389 SLNYLKSFPVDILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEF 1448 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG++LS P + A+L+ Sbjct: 1449 LKAHQCDRFQGFYLSEPLSAAEIEQAILS 1477 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 103/265 (38%), Gaps = 25/265 (9%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQ 61 R +R+S + +L+ F L +QP+ + GR++ E+L P Sbjct: 622 RAANERLSMETSLRRALRCEEFVLH------YQPLVELASGRVLGAEVLVRWQPP--GEA 673 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 +PP R+ + + V+ E D + LL +VN+ + Sbjct: 674 LVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLP--LLLAVNLSPRQFLRHDL 731 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANF 167 ++ + ++ L EL E + + T ++ G L +DDFGTG ++ Sbjct: 732 VGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSL 791 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L D +KI R L + + + ++ ++ + EGVETP++ ++ Sbjct: 792 AYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLR 851 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ S P P E + Sbjct: 852 QLGCDSGQGYLFSPPLPAEAFERWL 876 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 92/266 (34%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M R+ + ++ +L F L +QP + L+ E L HP Sbjct: 578 MARRSLALLTMESDLRHALARDEFELH------FQPKVRADLTLIGAEALIRWRHP--EK 629 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + ++E D + + SVN+ Sbjct: 630 GLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIP-SVSVNVSPRQFQDQT 688 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + + + L E+ E + T ++ + G L +DDFGTG ++ Sbjct: 689 LVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSS 748 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L D +KI + + S + + S ++ L V+ EGVE E+ + Sbjct: 749 LNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFL 808 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ SRP P T + Sbjct: 809 GSRDCQNFQGFLYSRPLPPAEFTTFL 834 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++ + + ++L+ L +QP G+++ E L HPL Sbjct: 540 MNQHAVKILELEKDLRQALERGELLLH------YQPKVSLQSGKIVGCEALIRWQHPL-- 591 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIE----HGLLASVNIDGPTLIALR 115 + P + + + + + A + + + +VN+ Sbjct: 592 RGLVSPADFIPLAEETGLIVPIGTWVLEQACQQAISWQQQQLPTITMAVNLSSRQFRHGN 651 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEFGPL-WLDDFGTGMAN 166 + +E L E+ E + + T ++ E G L LDDFGTG ++ Sbjct: 652 LCDVVDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMIALKERGVLLSLDDFGTGYSS 711 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L D +KI + Q + ++ + + + EGVET E+ + Sbjct: 712 LNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAHHLGLTTVAEGVETVEQLDFL 771 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ SRP P E + + + Sbjct: 772 EKCHCDILQGYLYSRPLPAEDFTSLLRS 799 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 101/267 (37%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + +R+ A ++++ +F L +QP + GR++ VE L THP Sbjct: 378 MGEEAFKRMEMERALRYAIEKNQFKL------LYQPQVELSSGRILGVEALLRWTHP--E 429 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + I ++ + V+ E L +VN Sbjct: 430 WGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQFAQA 489 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + +++ L E+ E + ++ E G + +DDFGTG + Sbjct: 490 DLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFS 549 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + ++ + + + + + + VI EGVET + Sbjct: 550 SLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEF 609 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ SRP P E + + Sbjct: 610 LRGHGCDMIQGYLFSRPVPPEQIAEIL 636 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 91/270 (33%), Gaps = 24/270 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + R+ ++++R F L +QPI G L+ E L HP Sbjct: 766 MQADALARVHLEADLRMAVEQRAFELH------YQPIVDCASGALVGAEALIRWKHP--E 817 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + V++E + L ++N+ G Sbjct: 818 RGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPP-LRLTLNVSGVQFREA 876 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRL---PKDST-FASMCEFGP-LWLDDFGTGMA 165 + + L FE+ E + + + E G LDDFGTG + Sbjct: 877 GLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFS 936 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R TL ++++ + V EGVE+ E+ Sbjct: 937 SLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREF 996 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 ++ QG+ + +P + + L Sbjct: 997 LRALGCDYLQGYLIGKPLAADAFEALMAPL 1026 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 96/267 (35%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ ++ + A +L+ F L +QP GR+ E L HP Sbjct: 439 MNQRAMETMEIESALRLALERGEFTL------YYQPKVDLASGRISGCEALIRWLHPR-- 490 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V+KE + + +VN+ Sbjct: 491 RGVVAPADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIA-NVAVNLSARQFRTG 549 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + + L E+ E + + + + G L LDDFGTG + Sbjct: 550 DLPGLVREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYS 609 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 +F+ LS +++KI R + P T+ + ++ + +R I EGVET + Sbjct: 610 SFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAY 669 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ LSRP P V Sbjct: 670 LRKQGCDEIQGYLLSRPLPASEYAALV 696 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 92/267 (34%), Gaps = 24/267 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNPSQ 61 Q + +L+ + L +QP + L+ VE L HP Sbjct: 694 EVAPQSLRMEADLKHALENNQLHLH------YQPQFDLKNAGLVGVEALIRWNHPTE--G 745 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P + + + V++E + F + +VN+ L Sbjct: 746 PVSPGEFIPLAEETGLIHPLGRWVLREACRQAKFWQNNF-ARIVPVAVNVSSLQLKKNNF 804 Query: 117 QPKILRQIER----LPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANF 167 + + + E+ E + + ++ G L +DDFGTG ++ Sbjct: 805 VHVLEECLNEFQIDPQLIELEITESAVMDRLEKSMELLNAIKGLGFNLAIDDFGTGYSSL 864 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L + + +KI R + L + + ++ + I EGVET E+ + Sbjct: 865 SYLKKFPFSKLKIDRSFVMDLETDENDAAIITAIISMATSLGLKTIAEGVETVEQKHFLT 924 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ LSRP + + L+ Sbjct: 925 DHGCDEVQGFLLSRPLSADAIEEMYLS 951 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 375 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q+ +R+ +++ F L +QP GR++ +E L HP Sbjct: 591 MREQINERMQMENHLRQAILRNEFELH------YQPQVDLGTGRIIGMEALVRWNHP--E 642 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P+++ + + V+ E ++Q + +E + SVNI L + Sbjct: 643 WGMVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEA-VCISVNISARQLKSR 701 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDS-TFASMCEFG----PLWLDDFGTGMA 165 I + + L E+ E + T M E L +DDFGTG + Sbjct: 702 YLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYS 761 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI R + P + + + L G++ EGVET + Sbjct: 762 SLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEY 821 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ +AQG++ S+P P + V Sbjct: 822 LRAQGCDSAQGYYFSKPLPANNIMAFV 848 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 375 bits (964), Expect = e-103, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 93/267 (34%), Gaps = 24/267 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNPSQ 61 Q +R +L+E L +QP R+ +E L P Sbjct: 796 EQAERRHRMEINLRSALKEGEMQL------VYQPQIDLGKVRITGMEALLRWQSP--EEG 847 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P R+ + + V+++ A L +VN+ Sbjct: 848 TISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKT-EASPLCVAVNLSAKQFHQPDL 906 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANF 167 I + + L E+ E + L + + G +DDFGTG ++ Sbjct: 907 AKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSL 966 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L ++ D IKIA+E + + + + + +I EGVE ++ + Sbjct: 967 SYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLL 1026 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 A QG++ ++P P + + + + + Sbjct: 1027 LHGCHAMQGYYFAKPMPAQEVPSFIHS 1053 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 87/262 (33%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M QR + E+L +F L +QP GR+ E L HP Sbjct: 601 MQASAAQRFALQNEIREALLFNQFKL------YYQPQVDRTGRITGAEALIRWLHP--ER 652 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + ++ L + L S+N+ Sbjct: 653 GMISPMDFIPIAEESGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQQPD 712 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++L + R L EL E I ++ G LDDFGTG ++ Sbjct: 713 FVTQVLAAVTRTGANPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSS 772 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + + +KI + + P + ++ L VI EGVET + + Sbjct: 773 LSYLKRLPINELKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWL 832 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 + QG++ +P E Sbjct: 833 EQEGCLHYQGYYFGKPVGAEEF 854 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 90/263 (34%), Gaps = 22/263 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M R + LQ+R L +QP+ GRL E L HP Sbjct: 568 MQAAASHRSALEADLRRGLQQRELVLH------YQPMVDGQGRLQGAEALVRWNHP--QR 619 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V++ L + + SVN+ Sbjct: 620 GLMPPAEFTPLAEQTGLILPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQFRQAD 679 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMAN 166 ++L +E L EL E + L A M + LDDFGTG ++ Sbjct: 680 FVQQLLATLEASGANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGYSS 739 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D IKI R L + +L L V+ EGVET + + Sbjct: 740 LSQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLEFL 799 Query: 227 QNSPAFAAQGWFLSRPAPIETLN 249 Q+ QG+ RP P E L Sbjct: 800 QHHGCQTFQGYHFGRPMPPEALA 822 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 374 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +R+ ++ R F L +QP G ++ VE L HP Sbjct: 638 MNIATTERMCLESDLRLAITRREFLLH------YQPQLDLRSGTIVGVEALIRWQHPT-- 689 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V++E L + I H L S+N+ + Sbjct: 690 RGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITH-LRMSINLSAGQFLDK 748 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRL----PKDSTFASMCEFG-PLWLDDFGTGMA 165 +I + L E+ E + + S ++ G L +DDFGTG + Sbjct: 749 TLPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYS 808 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + +KI R + P + + L ++ V+ EGVET + + Sbjct: 809 SLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKF 868 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+ +S+P P + + Sbjct: 869 LLSIGCEKVQGYLISKPLPADQAERFI 895 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 374 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 100/272 (36%), Gaps = 29/272 (10%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + +R++ + +L F L +Q + GR+ VE L HP Sbjct: 607 MNARSFERLTMESSLRHALTREEFRL------VYQVKVDSEDGRMSGVEALVRWHHP--E 658 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + V++ D + + +VN+ + Sbjct: 659 MGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPP-VRIAVNVSAQQFVET 717 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + R + L EL E + + + S+ G + +DDFGTG + Sbjct: 718 DVPEVVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYS 777 Query: 166 NFSALSEVRYDYIKIARELFVMLRQS-----PEGRTLFSQLLHLMNRYCRGVIVEGVETP 220 + S L + D +K+ R + +G + S +++L + I EGVETP Sbjct: 778 SLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETP 837 Query: 221 EEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 E+ +++ QG+ +SRP E L + Sbjct: 838 EQAEFLRSKGCDEVQGYLISRPVSGEDLISLF 869 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 374 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 91/268 (33%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + +R +L F L QP RL+ E L P Sbjct: 462 MQTTLDERAELEAGLRRALVRDEFVL------YVQPQVDAVRRLIGAEALLRWQPP--GR 513 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P+ + + + V+ + L + AD L SVN+ Sbjct: 514 AMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFLSVNVSARQFRQAD 573 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 ++ + R L+ EL E + L ++ G LDDFGTG A+ Sbjct: 574 FVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGVRFSLDDFGTGYAS 633 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ +K+ R + +P+ + ++ + N V+ EGVE + + Sbjct: 634 LSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVVAEGVEDDLQHAYL 693 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ RP + ++ + Sbjct: 694 VKHECSLFQGYLFGRPMSFDDFRASLGS 721 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 374 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 100/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + + A +L +F L +QP GR++ E L THP Sbjct: 734 MQARSTRTLLLANALRHALDRGQFSLH------YQPQVSLADGRVVGAEALLRWTHP--E 785 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++E + + D + L+ +VN+ Sbjct: 786 FGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPP-LVMAVNLSAAQFRNP 844 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + IE + EL E + + ++ G + +DDFGTG + Sbjct: 845 NLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYS 904 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L + +KI + + P+ + + S ++HL + EGVET ++ Sbjct: 905 SLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDF 964 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG++ SRP P E + Sbjct: 965 LRQQGCDTVQGYYFSRPLPAEAFVGYLQE 993 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 374 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 96/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M VI R ++L+ +F L +Q E L HP Sbjct: 882 MQETVIARALLERELSKALENDQFQL------YYQIQMTDLNEPFGAEALIRWIHP--ER 933 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP+ + + V+ + + L+ +VN+ + Sbjct: 934 GLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNVSARSFFQDD 993 Query: 116 QQPKILRQIER----LPWLRFELVEHIRL----PKDSTFASMCEFG-PLWLDDFGTGMAN 166 +I ++R L+ E+ E + L ++ + G +DDFGTG ++ Sbjct: 994 FVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDFGTGYSS 1053 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D +KI + + + + + ++ + + VI EGVET ++ + + Sbjct: 1054 LQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETEQQRQLL 1113 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 S QG+ +PAPI ++ Sbjct: 1114 IESGCSQYQGYLFGKPAPIRQFEESL 1139 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 102/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++R+ ++L+ +F + +QP GR+ VE L HP Sbjct: 604 MNTRAMERLLLQNQLHQALELGQFQVH------YQPQMDLRSGRICGVEALVRWQHP--E 655 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + + V++ + D + L SVN+ Sbjct: 656 RGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPA-LNLSVNLSPRQFRHP 714 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + R + L E+ E + + T + + G + +DDFGTG + Sbjct: 715 DLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHS 774 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + +KI RE + Q + + ++ L VI EGVET E+ Sbjct: 775 SLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASF 834 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ A QG+F++RP P L + Sbjct: 835 LREHGCDAVQGFFIARPMPAGELTGWL 861 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 97/268 (36%), Gaps = 25/268 (9%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNPS 60 +V + + +L+ F L +QP GR++ VE L HP Sbjct: 825 DDRVSEYLHIEHGLRSALERGEFELH------YQPQVDMAFGRVVGVEALLRWKHP--EQ 876 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P R+ + + V++E + + +VN+ G Sbjct: 877 GMISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGL-RPMTMAVNLSGRQFSRS- 934 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 I + WL+ E+ E + + ++ G + +DDFGTG ++ Sbjct: 935 VIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSS 994 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L D +KI R + + + ++ + + V+ EGVET +W + Sbjct: 995 LAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYL 1054 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ +SRP P L +L Sbjct: 1055 RQQGCDEVQGYLVSRPQPAAALGQWMLE 1082 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + +++ + +QP Q ++ +E L HP Sbjct: 503 MTQTTKRVFELENDLRKAVARNELRV------YYQPQIQLDSQQITGMEALVRWQHP--Q 554 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V+++ +A D + + +VN+ Sbjct: 555 RGLISPADFIPLAEETGLIVSIGEWVLRQACQQVAMWHDQGLPA-VTVAVNLSPLQFRHK 613 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMA 165 + + ++ L E+ E + + T + E G L +DDFGTG + Sbjct: 614 ALVRNVAKTLKETGINPACLELEVTESMIMDSIDKSTATMIELTELGAGLAIDDFGTGYS 673 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI + + L + ++ L + V+ EG+E ++ + Sbjct: 674 SLSYLRYFPLTKLKIDKSFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHEDQVQF 733 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ SRP P E + + Sbjct: 734 LVKRSCHQGQGFLFSRPVPAEDMEQLL 760 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 98/271 (36%), Gaps = 24/271 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + ++ +++ + + +QPI G++ E L HP Sbjct: 1128 MSGRALAQLRLETELRWAIERQELEV------YYQPIISLGTGKITGFEALVRWQHP--E 1179 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIE-HGLLASVNIDGPTLIA 113 + P + + + V++ L Q F L SVN+ G Sbjct: 1180 QGMISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQ 1239 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEF-GPLWLDDFGTGM 164 +I + I+ L+ E+ E + + L++DDFGTG Sbjct: 1240 TNLIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGY 1299 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + D +KI R + + E + ++ L + V+ EG+ET + Sbjct: 1300 SSLSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLA 1359 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 ++ QG+F S+P + ++ L Sbjct: 1360 QLRGRRCEYGQGYFFSKPLNRQAAEQLMMNL 1390 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 373 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 100/265 (37%), Gaps = 22/265 (8%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQ 61 ++ R A +L++++ L +Q + + E+L HP+ Sbjct: 872 QALLLARAELEHALHHALEQQQLML------YYQVQVNADYQPVGAEVLLRWFHPV--LG 923 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P ++ S + V+++ D L + A + L+ +VN+ Sbjct: 924 MISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASDVFKCDLVLAVNVSIRQFHEADF 983 Query: 117 QPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANF 167 K+ + L+ E+ E + + T + + G +DDFGTG ++ Sbjct: 984 AQKVQALVTDSGISPDRLKLEITESMLVHDVENIIATMQQLKKIGLNFSMDDFGTGYSSL 1043 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S++ + D +KI + + + + ++ + +I EG+ET ++ R + Sbjct: 1044 SSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQSMKLNIIAEGIETEQQRRLLA 1103 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ S+P P+ + Sbjct: 1104 LKGCTNYQGYLFSKPVPLSDFEGLL 1128 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 373 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 96/265 (36%), Gaps = 23/265 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M +V R + ++ +E++F L QP G + E L HP + Sbjct: 773 MQTEVEARAALERDLRQAQREKQFVL------YLQPQVDQSGHVSGAEALIRWQHPTH-- 824 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++E L L ++N+ Sbjct: 825 GLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNPDTAHLTLAINVSALQFRNPD 884 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS-TFASMC----EFGP-LWLDDFGTGMA 165 + R I L+ E+ E + L T M + G L LDDFGTG + Sbjct: 885 FVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERMQVLKNQLGVGLSLDDFGTGYS 944 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L ++ D IKI R + +P + ++ L + VI EGVET E+ Sbjct: 945 SLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALGRSFSLNVIAEGVETIEQRDA 1004 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNT 250 + QG+ RP PI+ Sbjct: 1005 LIARGCLTFQGYLFGRPGPIDAFPA 1029 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 90/266 (33%), Gaps = 24/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + + +L + L +QP ++ E L HP Sbjct: 818 MNLKTHELLLLENDLRHALSRDQLEL------YYQPQLDLQSNCIVGFEALLRWNHP--E 869 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + +++ + + L +VNI Sbjct: 870 RGLVSPLEFIPLAEETGLIVSMGEWILRSACRQIRTWNEE-HGRQLRVAVNISARQFHHY 928 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + + +E+ WL E+ E + + T + + G L +DDFGTG + Sbjct: 929 DLVHCVEKVLEQTGVPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYS 988 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI + L + L L ++ V+ EG+E E+ Sbjct: 989 SLSYLKKFPICSLKIDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDY 1048 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTA 251 +Q QG+ +SRP P+ Sbjct: 1049 LQQRGCQFGQGYLISRPLPVAQCTQF 1074 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 105/268 (39%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M Q ++R+ ++++++ F +QPI+ G+L+ E L H + Sbjct: 439 MHEQAVKRLQMEIELRQAIEQQEFIAH------YQPIFSLTTGKLIGFEALIRWQH--SQ 490 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFF-IEHGLLASVNIDGPTLIA 113 + P + + + ++ E L Q + + EH L SVN+ L Sbjct: 491 KGLISPAEFIPIAEETGLIVPMGKWILLEACTQLKQWQEQYDHEHILQISVNLSSKQLRD 550 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDST-FASMCEFG----PLWLDDFGTGM 164 +I + + L+ E+ E + + T + + L LDDFGTG Sbjct: 551 PYLVQEIDKILTHTEINPQNLKIEITESLLMENFDTAMNILLQLQERNTQLCLDDFGTGY 610 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L D +KI R + + + ++ L + VI EG+ET + Sbjct: 611 SSLSYLHRFPVDILKIDRSFVMQMHSGNNNLEIIRTIITLAHSLNMRVIAEGIETESQLS 670 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ QG+ S+P P E + + Sbjct: 671 QLKSLNCEQGQGYLFSKPVPQEVAESLI 698 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 372 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 97/269 (36%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLM-AVELLTVVTHPLNP 59 M + ++ ++++E +F L +QP + ++ E L HP Sbjct: 395 MADNINAHLTLGGGLRKAIEEEQFILH------YQPKIRLPDEIVVGAEALIRWVHP--E 446 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD++ S + V++ L + + ++ + SVN+ + Sbjct: 447 LGMISPDQFIPLAEESGLILPLGEWVIRRACRQLQEWREAGLDP-IKLSVNLSSRQFMQA 505 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + R +E +L EL E + + S + G L +DDFGTG + Sbjct: 506 DLVDMVQRALEETGVDPEYLELELTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGYS 565 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L + +KI R L + + + + N VI EGVE + Sbjct: 566 SLAYLKKFPIQTLKIDRSFIHDLGLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVDV 625 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ S+P + + A Sbjct: 626 LNGYDCQEVQGYLFSKPLSSDDFLMYLKA 654 >UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BZW1_DELAS Length = 1120 Score = 372 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 105/266 (39%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 + + R + + E L +F L +QP GR++ E L HP Sbjct: 818 LQAVLRSRTAMEQEMREGLVRSQFVL------YYQPQV-ANGRIVGAEGLLRWNHPRE-- 868 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + + V+ E LAQ A L+ +VN+ R Sbjct: 869 GLVPPSLFVSLAEETGLIQQLGEWVLGEACRQLAQWAAEPDMACLMLAVNVSPRQFHQAR 928 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 ++L+ ++ L+ EL E + L A++ G LDDFGTG ++ Sbjct: 929 FVEQVLQALKEHGANPRLLKLELTESLLLADVDDTAAKMATLKAHGVGFSLDDFGTGYSS 988 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI R + P + ++ L VI EGVET + + + Sbjct: 989 LAYLKRLPLDQLKIDRSFVRDVLSDPNDAAIARTIVALGTSLGLQVIAEGVETEAQRQFL 1048 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ A QG+ LS P P+ + V Sbjct: 1049 EDQHCHAWQGYLLSPPVPVRSFEALV 1074 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 372 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 89/248 (35%), Gaps = 22/248 (8%) Query: 19 LQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRM 78 ++ + L +Q + R + E+L HP + P ++ + + Sbjct: 485 VERNQLRL------YYQVQMDSSNRPLGAEVLLRWQHP--ERGLVSPAQFIPMAEETGHI 536 Query: 79 -----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIER----LPW 129 V++ L + L +VN+ ++ ++ R + + Sbjct: 537 VPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQFRSMDFVSQVQRTLAQSGAKPSL 596 Query: 130 LRFELVEHIRLPK-DSTFASMCEFG----PLWLDDFGTGMANFSALSEVRYDYIKIAREL 184 L+ EL E + L + T A M E +DDFGTG ++ L + D IKI + Sbjct: 597 LKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTGYSSLQYLKRLPLDQIKIDQSF 656 Query: 185 FVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAP 244 + + ++ + VI EGVET + + A QG+ RPAP Sbjct: 657 VRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQREFLDLRGCHAFQGYLFGRPAP 716 Query: 245 IETLNTAV 252 + + Sbjct: 717 LAEFEAIL 724 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 372 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++V R++ +L++ L +QP + G ++ +E L P Sbjct: 602 MNQKVNARLTIETGLRRALEKGEMLLH------YQPRLEPGTGAVVGMEALVRWNSP--D 653 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + V+ + + L SVNI + Sbjct: 654 MGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHD-SLRVSVNISARQFVGH 712 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 +++R IE+ + EL E + E G + +DDFGTG + Sbjct: 713 DFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYS 772 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + + + E + + ++ + + V+ EGVET E+ + Sbjct: 773 SLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKL 832 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + QG++ SRP P E + Sbjct: 833 LMEGNCEEIQGFYFSRPLPPEEFERYIA 860 >UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='Nostoc azollae' 0708 RepID=B9YGE9_ANAAZ Length = 637 Score = 372 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 90/268 (33%), Gaps = 23/268 (8%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPS 60 Q + + +L+ + F + +QP + G + +E L HP Sbjct: 365 NSQATELFILENSLYNALERQEFKV------YYQPQVNSSTGEITKMEALLRWQHP--EL 416 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V+K L +VN G Sbjct: 417 GLIPPATFIPIAEETGLILPISEWVLKTACLQNKAWQQTLNLSSLSVAVNFSGRQFQQPN 476 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + + + L E+ E + + + E G + +DDFGTG ++ Sbjct: 477 LVGIVEQVLCETKLAHRYLELEITETVAMQDVELTQKILRQLDEMGVTISIDDFGTGYSS 536 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI + L + + ++ L + V+ EGVET E+ + Sbjct: 537 LSYLKDFSIHALKIDQSFVQDLANKDHQTAITTAIISLAHGLNLSVVAEGVETQEQLNAL 596 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+F S P E + A Sbjct: 597 RILQCEIMQGYFFSHPLSAEEATRMLTA 624 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 372 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 94/266 (35%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + ++ + F+L +QP G+++ E L H Sbjct: 747 MQAVVTARADIEKDLRAAVGRQSFFL------AYQPQVDASGQVIGAEALLRWQH--QQR 798 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ A A SVN+ Sbjct: 799 GTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAARPGRERFTVSVNVSARQFRQAN 858 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMAN 166 ++L + R L+ EL E + L + +++ G LDDFGTG ++ Sbjct: 859 FVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLDDFGTGYSS 918 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D +KI + L P + ++ L VI EGVE+ E+ + Sbjct: 919 LSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVESVEQQDAL 978 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 A QG+ SRP + + Sbjct: 979 AAQGCLAYQGYLFSRPLALADFEAFL 1004 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + ++ ++ L +Q + R + E L HP+ Sbjct: 573 MQLAVETRAALEADMRHAVTGKQLRL------YYQIQLTSDHRPLGAEALIRWMHPV--R 624 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ S + V++ L + L+ ++N+ Sbjct: 625 GLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLILAINVSAQQFNKHD 684 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + + L+ EL E + L + ++ G L LDDFGTG ++ Sbjct: 685 FVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGVKLALDDFGTGYSS 744 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D IKI R + P + +++L + + VI EGVET ++ + Sbjct: 745 LSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNVIAEGVETEDQLNFL 804 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + + A QG+ +P PI+ + Sbjct: 805 KQNGCMAYQGFLFGKPMPIDEFEALL 830 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 93/268 (34%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + +R +L+ L +QP+ L VE L HP Sbjct: 617 LNKSAYERHILGLDLRYALERNELLL------YYQPVMDMPSHNLYGVEALLRWRHP--E 668 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + + PD++ + + V++ + + ++N+ Sbjct: 669 QKLITPDKFINLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVP-RVAINLSARQFRDK 727 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I R + + E+ E + + T + G + +DDFGTG + Sbjct: 728 DLIKNISRILSETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYS 787 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI R L RT+ + ++ + + VI EG+E E+ Sbjct: 788 SLSYLKQFPIHTLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDF 847 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + QG++ S+P + + ++ Sbjct: 848 LVTQKCNHYQGYYFSKPVTVSEIELMLM 875 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 93/266 (34%), Gaps = 24/266 (9%) Query: 4 QVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQR 62 + ++R+ ++L+ F+L +Q G++ VE L HP Sbjct: 322 RSLERLMLENNLRKALERHEFFLH------YQAKRNLKTGKIAGVEALVRWQHP--ELGT 373 Query: 63 LPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQ 117 + P + + + V++ + + +VN+ Sbjct: 374 ISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPP-ICIAVNLSARQFFDDNLI 432 Query: 118 PKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFS 168 I + L E+ E + + + G L +DDFG G ++ + Sbjct: 433 NDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLA 492 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 + D +K+ + + E R + ++ + VI EGVET E+ +++ Sbjct: 493 HIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRD 552 Query: 229 SPAFAAQGWFLSRPAPIETLNTAVLA 254 S QG++ S+P E +LA Sbjct: 553 SACDQTQGYYFSKPVSPEEFTRFMLA 578 >UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V069_9PROT Length = 734 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 95/266 (35%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R +L ++F L +Q + + E L HP Sbjct: 472 MQASLEARAVLEIDLRHALSLQQFKL------FFQIQMNAANQPIGAEALLRWLHPK--R 523 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + + V++ + + L +VN+ Sbjct: 524 GLVSPLDFISLAEDTGLILPIGQWVLETACTQIKAWEANPLACELQLAVNVSARQFHQPD 583 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ +E+ L+ EL E + L + + + E G +DDFGTG ++ Sbjct: 584 FVEQVRAALEKTGADPARLKLELTESVVLNNINDAVIKMSDLKEVGVRFSMDDFGTGYSS 643 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L+++ D +KI + P + ++ + N VI EGVET + + Sbjct: 644 LSYLTQLPLDQLKIDLSFVYNIGIKPTDAVIVQTIISMGNSLGMEVIAEGVETEAQRDFL 703 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + + A QG+ S+P I + Sbjct: 704 ERNGCHAYQGYLFSKPVSIGEFEGLI 729 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 89/265 (33%), Gaps = 24/265 (9%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPSQ 61 R + + ++ + + +QP G ++ E L P Sbjct: 1084 RASNEHLELENRLRHAITANQLRV------YYQPQVDIATGHIIGAEALVRWQDP--ERG 1135 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P ++ + + V+KE + D + L +VN+ + Sbjct: 1136 LVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPF-LTLAVNLSPHQFLRGNI 1194 Query: 117 QPKILRQIERLP----WLRFELVEHIRLPKDSTFASMCEF-----GPLWLDDFGTGMANF 167 I + + L EL E + + M L +DDFGTG ++ Sbjct: 1195 AGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSL 1254 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L D +KI + + + + + ++ + + V+ EGVET E+ +Q Sbjct: 1255 SYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQ 1314 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ S P P E + Sbjct: 1315 ARGCDLYQGYLTSPPIPAEEFEKLL 1339 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 90/268 (33%), Gaps = 24/268 (8%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPS 60 ++R ++L+ F L +QP + ++ +E L + Sbjct: 758 NTLTMERFQMENQLRKALEREEFVLH------YQPQFHLENNEVLGIEALLRWN--SSDR 809 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+KE + D + SVNI L Sbjct: 810 GIVSPMEFIPLAEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKI-VSVNISARQLQEKD 868 Query: 116 QQPKILRQIERLPW----LRFELVEHIRLPKDST-FASMCEFG----PLWLDDFGTGMAN 166 + +E L E+ E + + E G + +DDFGTG ++ Sbjct: 869 FVQAVKSILEDTQLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSS 928 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L ++ IKI + + + + ++ + + V EGVET ++ + Sbjct: 929 LAMLKQLPISNIKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNIL 988 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ S+P P E V Sbjct: 989 LQEKCNYLQGYLYSKPLPAEECLRFVQE 1016 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 102/269 (37%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + ++R++ + +L+ R F L +QP+ GR++ VE L P Sbjct: 407 LNHRAMERLTLETSLRRALERREFLLH------YQPLLGIGSGRIVGVEALLRWDSP--E 458 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + + V++ + L + L SVN+ Sbjct: 459 LGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTE-LCVSVNVSARQFRHD 517 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + + +L EL E + + + T + + G L +DDFGTG + Sbjct: 518 GFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYS 577 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + + + ++ L + V+ EGVET E+ Sbjct: 578 SLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAF 637 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ ++RP P L + A Sbjct: 638 LAALRCDVVQGYHIARPLPPRNLLEFLEA 666 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 88/266 (33%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R++ A ++L+ F + +QP R++ E L + Sbjct: 755 MQAAIDTRMAMEAALRQALERDEFHV------YYQPQVDQRERVIGAEALLRWR--PQGN 806 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + + P + + + V+ L L +VN+ Sbjct: 807 EAISPLEFIPLAEETGLILPIGKWVLDVACAQLKAWESDPRAAHLKIAVNVSARQFHEPD 866 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 + + R L+ EL E + L K T + G LDDFGTG ++ Sbjct: 867 FVATVQDSLARSGVDPTRLQLELTESVVLEKIETVVSRMEELNALGVSFCLDDFGTGYSS 926 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI + + + ++ + VI EGVET + + Sbjct: 927 LSYLKRLPLDQVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIAEGVETHAQRDFL 986 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 QG+ P PIE + Sbjct: 987 AGK-CLGYQGFLFCEPIPIEQWERVL 1011 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 100/263 (38%), Gaps = 22/263 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M ++ R S ++++++ L +Q R++ E L HP Sbjct: 578 MQEKLSVRASLESELRYAIEKQQLAL------YYQVQVDDNQRMVGAEALIRWIHP--ER 629 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + V+ LA+ A + L+ +VN+ AL Sbjct: 630 GTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSAHQFRALD 689 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + I+ L+ EL E + L ++ G L LDDFGTG ++ Sbjct: 690 FVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLDDFGTGYSS 749 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D +KI + L P + ++ L N + VI EGVET E + Sbjct: 750 LSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVETELELDIL 809 Query: 227 QNSPAFAAQGWFLSRPAPIETLN 249 + QG+ RP PIE L Sbjct: 810 KGYGCRLYQGYLFGRPVPIEQLQ 832 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 371 bits (955), Expect = e-102, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 97/270 (35%), Gaps = 24/270 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + + + A +L+ ++F L +QP G+++ E L HP Sbjct: 720 LQARTARALQIENALRRALERQQFELH------YQPQVSLGTGQVVGAEALLRWHHP--E 771 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S ++ V+ + D + SVN+ Sbjct: 772 LGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLR-AVSVNLSAVQFRHP 830 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + + R +++ L EL E + + + + G L +DDFGTG + Sbjct: 831 QLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYS 890 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI + L R + S ++ + EGVET + + Sbjct: 891 SLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQF 950 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 ++ QG+ SRP P + + A+ Sbjct: 951 LRAQGCDEGQGYLFSRPLPADAFEAYLRAM 980 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 371 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 98/270 (36%), Gaps = 24/270 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + RI +++ F L +QP G + +VE L HP Sbjct: 429 LNDSAALRIEMENDLRRGIEKEEFVL------YYQPKVTLATGEVESVEALVRWNHP--E 480 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 LPP + + + ++ L +VN+ I Sbjct: 481 KGILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSR-LRVAVNLSALQFINQ 539 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 +IL +E L E+ E + + T + + + G + +DDFGTG + Sbjct: 540 DLMKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYS 599 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 +FS L + D +KI R + +P + ++ L + VI EGVE+ + Sbjct: 600 SFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEM 659 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 ++ A QG+F SRP P L + + Sbjct: 660 LKAMECDAYQGFFNSRPLPPGELAERLKEM 689 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 371 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 102/268 (38%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + R+ +L R F L +QP G + E L HP + Sbjct: 752 MNERAVARLKIETQLRGALARREFVLH------YQPKASLINGEITGFEALLRWQHPAH- 804 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ + + + + VVK + + + + ++N+ Sbjct: 805 -GLVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLH-PIAINLSARQFQQQ 862 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 I + L FEL E + + + ++ FG + +DDFGTG + Sbjct: 863 DLDSIIGETLRATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYS 922 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + P+ T+ ++ L + V+ EGVET + Sbjct: 923 SLAYLKRFPLDVLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEF 982 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 + QG++ S+P P+E + ++ Sbjct: 983 LIRHGCDEMQGYYFSQPLPLEGASKVLM 1010 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 371 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 92/263 (34%), Gaps = 25/263 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M QV R+ A +L+ L +QP G+++ E L HP Sbjct: 809 MNIQVRDRLQLEGALRSALENGELHL------AFQPQVDGGSGQVIGAEALLRWQHP--E 860 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP R+ + + V++ Q L +VN+ + Sbjct: 861 LGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAG--RRLRIAVNVSARQFRSP 918 Query: 115 RQQPKILRQIERLPWLRFEL----VEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 +I ++ L E + + + + + G L LDDFGTG + Sbjct: 919 DLPARIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGTGYS 978 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 +F+ L D +KI + + G + ++ L + VI EGVETP + R Sbjct: 979 SFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQQRQ 1038 Query: 226 VQNSPAFAAQGWFLSRPAPIETL 248 + QG+ RP P Sbjct: 1039 LFEFGCDELQGYLFGRPVPAAEF 1061 >UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYQ8_METML Length = 739 Score = 371 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 95/267 (35%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R + +L +F L +Q + + E L HP Sbjct: 468 MQELVEVRATLESDLHNALATDQFELH------YQLQVNHENKPIGAEALIRWVHP--QR 519 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + V+ E +A + L+ +VNI Sbjct: 520 GMISPAHFIPVAEESALILNIGDWVLDEACRQIAVWSTNAKMCDLVLAVNISAQQFKQAH 579 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDSTFASMCEFGP------LWLDDFGTGMA 165 +++ I + L+ EL E + L + + L LDDFGTG + Sbjct: 580 FVDQVIAAIHKHGIDPSRLKLELTESVALDDITDVIAKKNLLRQKVGVTLSLDDFGTGFS 639 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D IKI + + + ++ + + VI EGVET + Sbjct: 640 SLSYLKRLPLDQIKIDQSFVRDITTDKSDAVMVKTIIDMAQNFSLNVIAEGVETEAQLAF 699 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ A QG+ S+P PIE + + Sbjct: 700 LKHHECKAYQGYLFSKPLPIEQFDALM 726 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 371 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 96/266 (36%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R +S + F L +Q + G ++ E L HP Sbjct: 790 MQAAMNARAILESELYKSWERNEFILH------YQLQVDSRG-IIGAEALVRWQHPR--R 840 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 LPP + + + + V++ + LA A L SVN+ Sbjct: 841 GLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSLQFCQPD 900 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 +++ ++R L+ EL E I + ++ G LDDFG G ++ Sbjct: 901 FVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDFGIGYSS 960 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D++KI R + T+ +L L VI EGVET + + Sbjct: 961 LYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGVETGAQKDFL 1020 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + A QG+ SRP P+E V Sbjct: 1021 ASHGCTAYQGYLFSRPLPLEQFERFV 1046 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 371 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 94/267 (35%), Gaps = 24/267 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQ 61 + ++R + +L +F + +Q GR++ E L HP Sbjct: 720 QNAVERFTLENQLRRALARDQFEV------YYQAQVSLETGRIIGAESLIRWIHP--ELG 771 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P ++ + + V+++ + + D + SVN+ G + Sbjct: 772 VVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDW-VSVNVSGVQIQRSNF 830 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANF 167 + + L E+ E + F + G L +DDFGTG ++ Sbjct: 831 ADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSL 890 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L + D IKI + L + + + + + + VI EGVET ++ ++ Sbjct: 891 SHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLK 950 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ SRP + A Sbjct: 951 KIGCQQGQGYLYSRPVTASEFTALLRA 977 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 105/267 (39%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ +R+ ++ ++ + L +QP G + + E L HP Sbjct: 629 MNNRMRERLYLEQSLRNAIGLHQLSLW------YQPKLDLASGSVKSAEALIRWRHP--Q 680 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++E LA+ D + ++NI L Sbjct: 681 LGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQ-ENQDIRVAINISAYQLSHG 739 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + ++++ ++ L L E+ E +P+ S+ E G + LDDFGTG + Sbjct: 740 KLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYS 799 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + E + +++L + V+ EGVET + Sbjct: 800 SLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEF 859 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ + QG++ +P P E + Sbjct: 860 LRTNGCDEVQGYYFCKPLPSEECLEFL 886 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 95/267 (35%), Gaps = 23/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + V + ++ ER+ L +Q + E L HP+ Sbjct: 546 MQQSVETIAALESDLRHAVHERQLQL------FYQIQLDHTHHPVGAEALLRWIHPV--R 597 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ S + V+ E +A + L+ +VNI Sbjct: 598 GMVSPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTRDLVLAVNISARQFKQPD 657 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPKDST----FASMCE-FG-PLWLDDFGTGMA 165 ++ I + L+ EL E I L + ++ G L LDDFGTG + Sbjct: 658 FVEQVGAMIRKHAIQPARLKLELTESIALEELDVIITKMHALRNGLGISLSLDDFGTGYS 717 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D IKI + + + ++ + + + VI EGVET ++ Sbjct: 718 SLSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEGVETAGQFFL 777 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+ RP P+ + Sbjct: 778 LKQYGCLLFQGYLFGRPVPLREFEALL 804 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 96/275 (34%), Gaps = 40/275 (14%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M R+V++R +L F+L +QP G+++ E L H Sbjct: 675 MNRRVLERSGLEHNLRLALAREEFFL------AYQPQVDQATGKVLGSEALLRWRH--AE 726 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P ++ S + V++ + +VN+ Sbjct: 727 KGMISPGQFIPLAEESGLILPIGHWVLQTACAQNKAWQLAGYPP-MRIAVNLSARQFQQP 785 Query: 115 RQQPKILRQIERLPWLRFELVE------------HIRLPKD----STFASMCEFGP-LWL 157 ++ + ++ E + + T ++ + G + + Sbjct: 786 DFFDQVAQVLKD--------TELDPRYLELELTESLLMADADVAVETLRALRDLGVGIAI 837 Query: 158 DDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGV 217 DDFGTG ++ S L D IKIA+E + + + P + ++ + + ++ EGV Sbjct: 838 DDFGTGYSSLSYLKTFPIDRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGV 897 Query: 218 ETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ET + ++ QG++ RP P E + Sbjct: 898 ETEAQLEFLRARRCQVMQGYYFGRPMPAENFIEYL 932 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 92/266 (34%), Gaps = 24/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M Q +R+ +L+ F L +QP R L E L HP Sbjct: 528 MNTQTFERLLLENGLRMALERHEFELH------YQPQLSAGERALAGAEALLRWRHP--Q 579 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP R+ + + V++E LA + +VN+ Sbjct: 580 LGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVP-RLAVNLSPRQFGQP 638 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFGP-LWLDDFGTGMA 165 K+ ++ L E+ E + + S + + G L +DDFGTG + Sbjct: 639 SLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYS 698 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI + L + + +L + + V+ EGVE+ E+ Sbjct: 699 SLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAF 758 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTA 251 ++ QG+ RP P Sbjct: 759 LEGKGCHVLQGYHFGRPLPAGEFAAL 784 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 98/266 (36%), Gaps = 24/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R + +L+ER+F L +Q GR E+L HP Sbjct: 664 MQTAIENRAALENDLHTALEERQFEL------FYQIQVDRDGRAEGAEVLLRWRHP--QR 715 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ + + V+ +A+ + L+ +VN+ Sbjct: 716 GLVSPAQFIPLAEDTGLIVPIGEWVLDTVCAQIAKWQ--GEQRNLVIAVNVSAKQFRQSN 773 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMAN 166 + + I+R L+ EL E + L + FG +DDFGTG ++ Sbjct: 774 FVELVQQIIQRHQVSPALLKLELTESLVLDNIQDTIDKMKVLKAFGVSFSMDDFGTGYSS 833 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D IKI + + + ++ L + VI EGVE+ + + Sbjct: 834 LSYLKQLPLDQIKIDQSFVRDIATDKTDLVMVKTIVDLGVNFEMDVIAEGVESEVQLGLL 893 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ S+P P+E + Sbjct: 894 KQCGCSRFQGYLFSKPVPVEAFELLI 919 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 100/264 (37%), Gaps = 18/264 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M R ++++ L +QP T GRL+ E L HP Sbjct: 433 MDEAEAARRDLERDLRQAIEGDELIL------YYQPQVSTGTGRLLGFEALVRWEHPT-- 484 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 +PP+ + S + + E + A + H L +VN+ + Sbjct: 485 RGLVPPNAFIPLAEESGLILPLGEWVLRAACREAARWAHPLKVAVNLSPRQFQQADLPER 544 Query: 120 ILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSAL 170 +L + L E+ E + + + + FG + +DDFGTG ++ + L Sbjct: 545 VLAILTETGLAPTRLELEITETLIINDMARALGILRRLKAFGVSIAMDDFGTGYSSLATL 604 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI R + SP+ + +L L V+ EGVET + R + Sbjct: 605 QAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDAQMRFLAAEA 664 Query: 231 AFAAQGWFLSRPAPIETLNTAVLA 254 AQG+ +S+P PIE + A Sbjct: 665 CDEAQGYLISKPQPIERFAEQIDA 688 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 95/265 (35%), Gaps = 24/265 (9%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQ 61 ++ ++ +L R +++ +QP G + +E L HP Sbjct: 440 TAALRSLTLEGDLRMALARRELFVE------YQPEIDLKTGETVGLETLVRWDHPT--LG 491 Query: 62 RLPPDRYFTEITVSHRMEVVKEQ-----IDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 +PP + + + + E A +E + +VN+ G Sbjct: 492 LIPPLDFIPLAEETGLILPIGEWILSIACMQNAIWHKSGLEP-IRVAVNLSGHQFRQRNL 550 Query: 117 QPKILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANF 167 I + + L E+ E + + T + G L +DDFGTG ++ Sbjct: 551 IKTIAKTLTNSRLDPQHLELEITESTLMENAASTIHTVKELKSMGVRLAVDDFGTGYSSL 610 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L D +KI R + + + + ++ + + VI EGVE ++ + +Q Sbjct: 611 SYLRRFPLDVLKIDRSFIRDVTINADDAAITRAIIAMAHNLNLEVIAEGVENEQQLQFLQ 670 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAV 252 + AQG++ RP L + Sbjct: 671 ENNCDMAQGYYYCRPLTPAKLTKHL 695 >UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W3W9_9CYAN Length = 560 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 90/265 (33%), Gaps = 24/265 (9%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQ 61 + + ++L+ + F L +QP G++ E L HP Sbjct: 294 AKSQEAFELEIQMRQALERQEFQL------YYQPKVNLLTGQIEGAEALVRWNHP--QRG 345 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 + P + + + V+++ D I L +VN+ Sbjct: 346 IISPVEFIPLAEKTGLIVPLGEWVLRQACHQARVWQDQGIYP-LRIAVNLSPRQFNQSNL 404 Query: 117 QPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANF 167 ++ + +L EL E + T + G + +DDFGTG + Sbjct: 405 TNFVVDILHETGLNPHYLELELTESTLVQNPESAIATLQTFKALGIRISIDDFGTGYSAL 464 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L + +D +KI R L + + + +L + V+ EGVET + ++ Sbjct: 465 SQLKKFPFDVLKIDRSFVCQLTEDSRDEAITTAILQMARSLKLKVVAEGVETLSQLNFLK 524 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAV 252 QG++ S P E + Sbjct: 525 GHQCDEIQGYWFSPPLSAEAFADLL 549 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 87/261 (33%), Gaps = 22/261 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R +L F L +QP GR++ E L Sbjct: 746 MQAVVAARAELELKLRAALACNGFRL------YYQPQLDRNGRVIGAEALIRCF--DAEG 797 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + + P + + + V++ L GL S+N+ Sbjct: 798 EMISPAAFIPLAEETGLIVPIGEWVLETACAQLRAWQRTPSTAGLSLSINVSARQFHQPD 857 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 K+ IER L EL E + + T + G LDDFGTG ++ Sbjct: 858 FVGKVAAAIERHRIRPGGLEIELTESVVIGDIETTVLRMRQIKALGVRFALDDFGTGYSS 917 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +D +KI + + + + +L L V+ EGVET + + Sbjct: 918 LSYLKRLPFDQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLDLKVVAEGVETAAQHELL 977 Query: 227 QNSPAFAAQGWFLSRPAPIET 247 QG+ RP PIE Sbjct: 978 LTRGCELFQGYLFGRPVPIED 998 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 93/267 (34%), Gaps = 24/267 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQ 61 +V ++ A +++ L +QP G++ VE L P Sbjct: 433 ARVEEQTILENALHQAVANHELEL------YYQPKVDLKTGQISGVEALIRWRRP--GIG 484 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 +PPDR+ + V++ + +VN+ Sbjct: 485 VIPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPP-IRIAVNLSARQFRQQDV 543 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMANF 167 + +E L EL E + + T + G L LDDFGTG ++ Sbjct: 544 AAMVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSL 603 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 S L ++ D +KI R + S EG +L ++ + + EGVET + + Sbjct: 604 SYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLN 663 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 A QG++ S P + + + A Sbjct: 664 RHRCHAMQGYYFSHPVTGDEIADMLSA 690 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 96/267 (35%), Gaps = 24/267 (8%) Query: 3 RQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQ 61 + RI ++ + + +QP GR++ E L P+ Sbjct: 399 QAARARIDIEVRLRRAITQGELRV------YYQPQVDIPSGRIVGAEALVRWQCPIE--G 450 Query: 62 RLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQ 116 +PP R+ T + + V++E + + L +VN+ + Sbjct: 451 LVPPARFITIAEATGLIGEIDDWVLRETCQQGQRWRAAGLPT-LTLAVNLSAYQFLQGDI 509 Query: 117 QPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANF 167 + + + + L EL E + +++ + G L +DDFGTG ++ Sbjct: 510 SQTVAQVLRDTGYPAAFLELELTESALMQREAQAIQMLDRLKALGVRLAIDDFGTGYSSL 569 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L D +KI + + + + + ++ + + V+ EGVE E+ +Q Sbjct: 570 AYLKLFPLDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEGVENKEQLAYLQ 629 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+ SRP P L+ Sbjct: 630 TQGCDQFQGYLTSRPVPAAEFEKLFLS 656 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 102/266 (38%), Gaps = 24/266 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M + ++RI +++++ +F +QP + +E L HP Sbjct: 448 MEAKSLERILMENEMRKAIEQEQFQ------IYYQPKIDIATSAMTGMEALVRWVHP--E 499 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP+R+ + + ++K+ D L SVN+ + Sbjct: 500 LGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYT--LKVSVNLSARQIYQK 557 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRL---PKDSTFASMCEFG-PLWLDDFGTGMAN 166 I ++ WL E+ E I + + + + G + +DDFGTG ++ Sbjct: 558 DLVEMIKDILQETKLSPHWLELEITESIFVKMEEATAVLQQIRDIGIQISIDDFGTGYSS 617 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 FS + + D IKI + + E + + ++ + VI EG+E ++ + Sbjct: 618 FSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAAL 677 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+ S+P P + + + Sbjct: 678 KENGCDHGQGYLFSKPLPTDDFDQLL 703 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 100/268 (37%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M +++++ IS ++L+ L +QPI R++ E L HP Sbjct: 562 MHQEILEAISLETDLRQALEAGELLLH------YQPIVDVKDSRIVGFEALVRWDHP--D 613 Query: 60 SQRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 +PP ++ + + V+ E L + L SVN+ + Sbjct: 614 RGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVK 673 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGM 164 + + + L+ E+ E + + + G + +DDFGTG Sbjct: 674 DGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVKIAIDDFGTGY 733 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L ++ D++KI R E + + ++ L VI EGVE P++ Sbjct: 734 SSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIAEGVECPDQLD 793 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ + AQG+ SRP + Sbjct: 794 RLRLADCDKAQGFMFSRPVEATAAGRLI 821 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 369 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 96/267 (35%), Gaps = 24/267 (8%) Query: 4 QVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQR 62 R++ + +L+ F L +QP +T ++ +E L HP Sbjct: 389 AANDRLALETSLRHALEREEFTLH------YQPRVRTQDDVMIGMEALVRWHHP--DKGL 440 Query: 63 LPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQ 117 PD + + + V++ + E + +VN+ L Sbjct: 441 TAPDAFIPMAEETGLITPLGLWVLRTACRQAQTWMRLYGEP-IHMAVNLSMRQLRQPDLV 499 Query: 118 PKILRQIERLPW----LRFELVEHIRL----PKDSTFASMCEFG-PLWLDDFGTGMANFS 168 +I + L EL E + + + A + G L +DDFGTG ++ + Sbjct: 500 SQIDAILRDTGLPASSLELELTESVLMAGDGHTLTALAELKALGVRLAIDDFGTGYSSLA 559 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 L + D +KI R + + S ++ + V+ EGVETPE+ ++ Sbjct: 560 YLKRLPIDALKIDRSFVSDIPHDASDMAIASTIIAMARTLGLEVVAEGVETPEQLAFLKK 619 Query: 229 SPAFAAQGWFLSRPAPIETLNTAVLAL 255 + QG+ S P + + + L Sbjct: 620 EGCDSYQGFGFSPPVDAQAMTLWLDGL 646 >UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNV7_THASP Length = 884 Score = 369 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 99/268 (36%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M+ V R +L++R+F L +QP G ++ VE L HP+ Sbjct: 618 MLADVRARADVEAGLWIALEQRQFVLH------YQPQVAADGAVLGVEALVRWHHPV--R 669 Query: 61 QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKA-----DFFIEHGLLASVNIDGPTLIALR 115 +PP + + + + A D L+ +VN+ + Sbjct: 670 GLVPPGEFIPLAEECGLILPLGRWVLEAACAQLAAWADDPWRSRLVIAVNVSARQFLHED 729 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMAN 166 ++ +ER L EL E + ++ G LDDFGTG ++ Sbjct: 730 FVAGVVAALERSGADPGRLDLELTESSLVTDVDKVSEKMEALKALGVGFSLDDFGTGYSS 789 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI R + P + ++ L + VI EGVE E+ + Sbjct: 790 LAYLKRLPLDQLKIDRSFVRDILVDPNDAAIARMIIVLADNLGLRVIAEGVECEEQRDFL 849 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + + QG+ S P PI+ L + A Sbjct: 850 ARNGCSSYQGYLFSAPQPIDALEAFLDA 877 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 369 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 98/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q +++ A +L+ + +QP R++ VE L HP+ Sbjct: 836 MNAQNTEQLMLESALRHALERGELEMH------YQPKMDLQTQRIVGVEALMRWHHPI-- 887 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ + ++ + + L SVN+ + Sbjct: 888 LGMIPPVQFIPIAEELGLIVSLGKWALERACADSRSWQKYGLPKVL-MSVNLSPRQFESR 946 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMA 165 I +E L E+ E + ++ + G L +DDFGTG + Sbjct: 947 TLIADIQAVLEASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYS 1006 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +KI R L Q + R L ++ L + V+ EG+ET + Sbjct: 1007 SLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQLDY 1066 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 +++ AQG++L +P P + + + Sbjct: 1067 LRSHGCDEAQGYWLCKPVPADEVRNFMA 1094 >UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 Tax=Comamonas testosteroni RepID=D0IZ49_COMTE Length = 1115 Score = 369 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 103/266 (38%), Gaps = 23/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 + + +R + + LQ F L +QP + G+++ E L HP Sbjct: 840 LQSALQERRTLEQDMRAGLQAGEFEL------FYQPQVEM-GKVIGAEGLLRWKHP--EK 890 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V++ LA+ A L+ SVN+ Sbjct: 891 GFVPPAHFIPLAEETGVILPLGDWVLQAACQQLAKWAKHPRYAQLVLSVNVSPKQFHQSG 950 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFGP----LWLDDFGTGMAN 166 ++L+ + L+ EL E + + D T A M LDDFGTG ++ Sbjct: 951 FVEQVLKALAEHGADARRLKLELTEGMLVSDVDDTIAKMMRLKSYGIGFSLDDFGTGYSS 1010 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + D +KI R + P + ++ L VI EGVET + R + Sbjct: 1011 LSYLKRLPLDQLKIDRSFVRDVLTDPNDAAIARTIVALAKSLSLHVIAEGVETQAQCRFL 1070 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + +A QG+ +S P P+ + V Sbjct: 1071 EGIRCYAWQGYLMSPPVPVSEFESLV 1096 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 96/268 (35%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M Q + + A +L+ + L +QP GR+ VE L HP Sbjct: 494 MQAQSARALQLTNALRRALERNQLSLH------YQPQVSIATGRVCGVEALLRWHHP--E 545 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + ++ V++ + L + L +VN+ Sbjct: 546 LGAVSPAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPA-LTMAVNLSAVQFRQP 604 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + + R + L EL E++ + +T + G L +DDFGTG + Sbjct: 605 QLLELVDRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYS 664 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI + L R + S ++ + EGVET + Sbjct: 665 SLSHLKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTF 724 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ AQG++ SRP L +L Sbjct: 725 LREQGCDEAQGFYFSRPLGAPHLQQYLL 752 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 95/269 (35%), Gaps = 25/269 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M + +R+ + ++ L +QP G + +E L Sbjct: 677 MNESIQKRVQMEQDLRRGIENGELEL------YYQPQLDPHGGGAVGLEALVRWR---KG 727 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + +PP + + + V++ L D + + SVN+ Sbjct: 728 DRMVPPLEFIPIAEETGLITEVDAWVLRAACLQLKMWRDQ-KQQMVPVSVNLSPRQFQDA 786 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + ++ L+ E+ E + + T + G L +DDFGTG + Sbjct: 787 YCVELVRKVLQESNIEPGCLKIEVTESMVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYS 846 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +D +KI + + P+ + ++ L ++ EGVET E++ Sbjct: 847 SLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSF 906 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + + QG+F S P P+ + Sbjct: 907 LVRAGCDLIQGYFYSPPLPVAACMHFLQE 935 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 90/256 (35%), Gaps = 24/256 (9%) Query: 12 PEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNPSQRLPPDRYFT 70 + L+ F L +QP G ++ VE L HP + P R+ Sbjct: 715 EGDIRKGLERGEFRL------FYQPQVSADDGTIVGVEALIRWQHP--QQGLVSPARFIP 766 Query: 71 EITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIE 125 S + V+ + Q + +VN+ L A + I Sbjct: 767 VAEESGLIVPIGEWVLTAACRQVRQWQQSGVPVP-RVAVNVSARQLGAAGFLDTVAAIIV 825 Query: 126 RLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMANFSALSEVRYD 176 L EL E I + ++ + + G +DDFGTG ++ S + Sbjct: 826 ATGIAADRLELELTESILMDPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIG 885 Query: 177 YIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQG 236 +KI + L Q + + + ++ + V+ EGVET E+ +Q + QG Sbjct: 886 TLKIDQSFVHGLPQDADDAGITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQG 945 Query: 237 WFLSRPAPIETLNTAV 252 + S P P + + + Sbjct: 946 YLFSYPLPPDEMEAIL 961 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 101/264 (38%), Gaps = 22/264 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M ++QR + E ES++ F L +QP GR+ E+L HPL Sbjct: 545 MQAMLVQRAALEEDMRESMRLSHFLLH------YQPQVVGSGRITGAEVLLRWPHPL--R 596 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + ++ + V++ LA + L SVN+ Sbjct: 597 GLVPPAEFIPLAEDTNLITALGHWVLETACKTLADWSAQDDMKHLSVSVNVSARQFRQPH 656 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 +++ +ER L+ EL E + + +++ G LDDFGTG ++ Sbjct: 657 FVAEVMSILERTGADPHLLKLELTESLLVEDVEDIVAKMSALKSRGVGFSLDDFGTGYSS 716 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + D +KI + + P + ++ L + VI EGVE + + Sbjct: 717 LAHLKRLPLDQLKIDQSFVRDILTDPNDLAIGRMVVALADSLGLTVIAEGVELAAQRELL 776 Query: 227 QNSPAFAAQGWFLSRPAPIETLNT 250 A QG+ SRP P E Sbjct: 777 AQIGCDAYQGYLFSRPLPREPFEA 800 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 102/271 (37%), Gaps = 24/271 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNP 59 M Q Q + +L+ F + +QPI R L+ E L HP Sbjct: 1147 MHTQATQLLELETNLRLALEREEFIV------YYQPIVSLMNRNLLGFEALVRWIHP--E 1198 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEH-GLLASVNIDGPTLIA 113 + P + + + V++E + + FI L SVN+ G L Sbjct: 1199 KGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNLSGKQLQQ 1258 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKDSTFASMC-----EFGPLWLDDFGTGM 164 +I + L+ E+ E + + + + + + +DDFGTG Sbjct: 1259 PNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSIDDFGTGY 1318 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + D +KI R + Q E + ++ L + V+ EGVET + R Sbjct: 1319 SSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGVETEQHLR 1378 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 +Q QG+F S+P E + + + L Sbjct: 1379 QLQQLGCEFGQGYFFSKPLESEKIVSWLERL 1409 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 95/267 (35%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIY-QTCGRLMAVELLTVVTHPLNP 59 M + ++RI ++L+E F + +QP GR++ +E L Sbjct: 443 MNAKALERIILESQLHKALKEEEFIV------YYQPQVSNQSGRVVGIEALVRWN--SKE 494 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ + V++E D + ++NI G + Sbjct: 495 LGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGFPP-VTLAINISGQQFMKN 553 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + ++ L EL E + + T ++ G L +DDFGTG + Sbjct: 554 ELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQALKGMGVRLAIDDFGTGFS 613 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI R + P+ + + + + VI EGVET + Sbjct: 614 SLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMAHTMKLKVIAEGVETKPQLDF 673 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+ S+P P L Sbjct: 674 LTKNGCDMYQGYLFSKPVPSTELPRLF 700 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 368 bits (947), Expect = e-101, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 100/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++V +R+ ++++ L +QP GR+ E L HP Sbjct: 828 MTQRVTRRLQTEAELRKAIESGDLRLH------YQPQIDAASGRVYGCEALVRWQHP--E 879 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 LPPDR+ S + V++E + D + L +VNI Sbjct: 880 RGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGLPP-LDVAVNISALQFRRR 938 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 + R + + E+ E + ++F + G L LDDFGTG + Sbjct: 939 DFVATVARVLGETGADPARIELEITESALMDATPELVASFDQLVALGLTLALDDFGTGYS 998 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + +KI R L +PE + S L L V+ EGVET ++ Sbjct: 999 SLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQRGY 1058 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + A QG+ SRP +E T Sbjct: 1059 LCKRGCRAMQGYLFSRPLGVEEFGTWF 1085 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 368 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 98/269 (36%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++R++ +L+ F L +QP GR++ +E L P Sbjct: 398 MNAMALERLTLENNLRWALKRNEFRL------CYQPQLDAASGRVVGMEALLSWHRPGCD 451 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PPD + + + V+ + + +VN+ + Sbjct: 452 --VVPPDDFIPLAEETGLIASIGEWVLWNACAQAVTWLHEGLPP-VRVAVNLSSLQFRSR 508 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 R + + + L E+ E + + + + + G +DDFGTG + Sbjct: 509 RLAELVRKVLRATGLPPSHLELEITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYS 568 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S LS D +KI R + P L + ++ + VI EGVET E++ Sbjct: 569 SLSRLSRFPLDALKIDRSFVRDISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAF 628 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ + QG+ S+P + + A Sbjct: 629 LRANGCAEVQGFLFSQPLNPDAAAAFLRA 657 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 99/267 (37%), Gaps = 25/267 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR--LMAVELLTVVTHPLN 58 M + R+ A ++++ R L +QP +Q ++ E L + Sbjct: 493 MNADALARLQMEMALRQAVENRELLL------YYQPQWQLADSPSVIGAEALIRWRN--K 544 Query: 59 PSQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIA 113 + + PD++ S + V+ E L D + L +VN+ A Sbjct: 545 EGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQG-KKQLRVAVNVSARQFRA 603 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDSTFASMC----EFGP-LWLDDFGTGM 164 + + + + EL E I + K A + G + LDDFGTG Sbjct: 604 GNLAEVVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVGIALDDFGTGY 663 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + LS +KI R L E + ++ L +R V+ EGVET E+ Sbjct: 664 SSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRA 723 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTA 251 +Q+ AQG+ S P P E Sbjct: 724 YLQSRGCDLAQGFLFSPPLPAEQFAEF 750 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 97/262 (37%), Gaps = 24/262 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M V +R +++ L +QP + G+++ VE L HP Sbjct: 967 MNTLVTERQQIETGLRQAIACNELLL------YYQPQVDISSGQVVGVEALIRWQHP--E 1018 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PDR+ + V++ + LA+ D GL +VN+ L Sbjct: 1019 LGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKG-AKGLRMAVNLSAHQLRKD 1077 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLP----KDSTFASMCEFG-PLWLDDFGTGMA 165 I+ + + L E+ E + + A + + G L +DDFGTG + Sbjct: 1078 TIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYS 1137 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +K+ R + P + + + + + V+ EGVE + Sbjct: 1138 SLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVL 1197 Query: 226 VQNSPAFAAQGWFLSRPAPIET 247 + QG++ S+P + Sbjct: 1198 LSGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 92/262 (35%), Gaps = 18/262 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++I R ++L F + +QPIY R+ E L HP+ Sbjct: 696 MDARLIARRIMERDLRDALAREAFEV------YYQPIYSLETDRICGFEALLRWNHPV-- 747 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + E + A + L +VN+ + Sbjct: 748 RGFVSPAEFIPIAEELGLIVPLGEWVLRRACEEAARWPDELKVAVNVSAVQFTSASLVTA 807 Query: 120 ILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 + + R L E+ E + + + S+ G + +DDFGTG ++ S L Sbjct: 808 VREALRRTGLPGRRLELEITETVLVANPGATTAILHSLRALGVRVAMDDFGTGYSSLSYL 867 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI + L + ++ L EGVET + ++ Sbjct: 868 RSFPFDKIKIDQSFVRDLCVKDGTDFIVRAVIGLGASLGMTTTAEGVETEAQLAHLRAEG 927 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG+ SRP P+ + + + Sbjct: 928 CDEVQGYLFSRPVPVSEVASVI 949 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 91/267 (34%), Gaps = 25/267 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + + + +++ L +QP + G L +E L H Sbjct: 1246 LNEIATRHVLLEAGLKQAIHRNELSL------VYQPKFSLRDGSLTGLEALLRWHH--TE 1297 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V+ LA+ + +VN+ L Sbjct: 1298 LGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFN-NISMAVNLSARQLK-A 1355 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 I + L EL E + + S + + G + +DDFGTG + Sbjct: 1356 DIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGTGYS 1415 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L D +KI RE + P+ + S ++ L + V+ EGVET + Sbjct: 1416 SLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQLNF 1475 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ LS+P + T + Sbjct: 1476 LGLQGCDEVQGFLLSKPLSAKDCLTLL 1502 >UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDT9_TOLAT Length = 753 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 93/266 (34%), Gaps = 30/266 (11%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V R E L++++ L +QP GR++ E L HP Sbjct: 493 MQAIVTSRAELENDLREGLRQQQLLLH------YQPQVDVHGRIIGAEALVRWQHPS--R 544 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + V+ E L + A L +VNI + Sbjct: 545 GMVSPAHFIPLAEESGLILSLGDWVLNEACRQLRRWAAQPAMAHLTMAVNISARQIHQPD 604 Query: 116 QQPKILRQIERLP------------WLRFELVEHIRLPKDSTFASMCEFGP-LWLDDFGT 162 ++L I L E E I L ++ G LDDFGT Sbjct: 605 FVDQVLAAIHTAGVQPYHLKLELTESLLLEDTEEIILK----MTALKACGVGFSLDDFGT 660 Query: 163 GMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEE 222 G ++ + L + D +KI + L P + S ++ L VI EGVET + Sbjct: 661 GYSSLAYLKRLPLDQLKIDKSFVHDLLTDPNDAAIASSIITLAQSLGLNVIAEGVETEAQ 720 Query: 223 WRDVQNSPAFAAQGWFLSRPAPIETL 248 + ++ + QG+ P P + L Sbjct: 721 RQRLEALGCYTYQGYLFGHPVPADML 746 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 97/267 (36%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M V +++S + ++L F L +QP GR++A E L H + Sbjct: 494 MTAIVRKKLSRTDELRQALLRDEFVLH------YQPQVDVRTGRIVAAEALIRWNH--SS 545 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V+K D E + SVN+ Sbjct: 546 EGLVYPGDFIALAEETSLIVPIGEWVLKTACRQAKAWQDQGREP-IRISVNVSARQFQEK 604 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 R + + WL E+ E + + + + G L +DDFGTG + Sbjct: 605 RLIETVATALSESGLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYS 664 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + SAL +KI R + + + + ++ L + VI EGVET E+ R Sbjct: 665 SLSALKRFPLSRLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARF 724 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + S QG+ SRP N + Sbjct: 725 LVESGCNEIQGYLFSRPVEEAQFNRML 751 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 367 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 89/246 (36%), Gaps = 24/246 (9%) Query: 22 RRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRM-- 78 F L +QP G+++ +E L P + +PP + S + Sbjct: 808 NEFLLH------YQPQVDIVSGQIVGIEALVRWHDP--EAGLVPPSSFIPLAEESGLIGP 859 Query: 79 ---EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPW----LR 131 V++E D + SVN+ +++ + L Sbjct: 860 LSEWVLREACRQNKAWQDQGLPPA-RVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLE 918 Query: 132 FELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMANFSALSEVRYDYIKIARELFV 186 EL E + + G L +DDFGTG ++ S L D +KI R Sbjct: 919 LELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVS 978 Query: 187 MLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIE 246 + S + T+ S ++ L + VI EGVET + ++ QG++ ++P E Sbjct: 979 DIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTE 1038 Query: 247 TLNTAV 252 ++ + Sbjct: 1039 GISELL 1044 >UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6G7_9BACL Length = 700 Score = 367 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 95/268 (35%), Gaps = 23/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ ++ ++L+ F+L+ +QP + G+++ +E L HP Sbjct: 438 MKQRTQAKVELENDMRKALEREEFFLE------FQPQIRLDTGKMVGMEALVRWNHPK-- 489 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + S + V+K + E + SVN+ Sbjct: 490 RGLIPPSEFIPLAEESGLIVPLGEWVLKTACQYNKKWQMDGFEP-VCVSVNLSMRQFRQY 548 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKD---STFASMCEFG-PLWLDDFGTGMAN 166 + + +L E+ E + + + G + +DDFGTG ++ Sbjct: 549 NLAEHVNAILREVGLDPQYLELEVTESMTYDIETALDQLHRLKRLGIHISIDDFGTGYSS 608 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + D +KI R + + S + + + V EGVE E+ + Sbjct: 609 LYYLKSLPIDRLKIDRAFVKEVMYDGNDAAIVSTITTMAHHLKLKVTAEGVENEEQLEFL 668 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + QG+ S+P L + L+ Sbjct: 669 KRQRCHEGQGYLFSKPVSAGVLESEFLS 696 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 367 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 101/267 (37%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ R+S +L+ ++ L +QP +++ +E L HP Sbjct: 554 MNAELGHRLSLENDLWHALENQQLVLH------YQPQVCMRNSQIIGMEALIRWQHPK-- 605 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP ++ + V++ Q + +VN+ L Sbjct: 606 LGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPP-IRVAVNLSVRQLEQK 664 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 I + ++ L E+ E + + T + + G L LDDFGTG + Sbjct: 665 DLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYS 724 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + +KI + + + + ++ L + VI EGVE+ +++ Sbjct: 725 SLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAF 784 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+ LSRP P E + + Sbjct: 785 LLENGCDEVQGYLLSRPRPFEEMEALL 811 >UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with response regulator, putative n=6 Tax=Cyanobacteria RepID=B0C9M5_ACAM1 Length = 636 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 91/269 (33%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M V + +++ + F L +QPI G + E L P Sbjct: 369 MHEDVQSSLQLETDLRRAIERQEFILN------YQPIVALDTGMITGFEALVRWISP--E 420 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEH-GLLASVNIDGPTLIA 113 + P ++ + + V++E L + + L SVN+ Sbjct: 421 LGFVSPGKFIPLAEDTGLIIPLGEWVLREACRQLNEWQSNNVTDIPLTMSVNLSVKQFSQ 480 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEF-GPLWLDDFGTGM 164 I + + L+ E+ E + + + L +DDFGTG Sbjct: 481 PNLIETIDQILAETQLPTQCLKLEITESAIMENSDSAAKILDQLRDRQIHLSIDDFGTGY 540 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + +K+ R L + + + ++ L V+ EG+ET E+ Sbjct: 541 SSLSYLHRFPVNTLKVDRSFVCRLDAADDNVAIVQAIVTLAQTMGMDVVAEGIETTEQQH 600 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++N QG+ +P ET + Sbjct: 601 QLENLGCEYGQGYLFCKPVNAETAGEMLA 629 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 90/266 (33%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V E+L+ F L +QP G ++ E L PL+ Sbjct: 660 MQAVVDAHARLEARMHEALEANAFRL------FFQPQVNRRGVVIGAEALLRW--PLDGG 711 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ LA+ L +VN+ Sbjct: 712 AMVSPAEFIPLAEDTGHIVRLGLWVLRSACAQLARWQMNEGTRHLKIAVNVSARQFHQPD 771 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 + + L EL E L + G LDDFGTG ++ Sbjct: 772 FVASVKDSVRAAAIDPCRLELELTESAILSDVDETIRRMNELRALGIRFALDDFGTGYSS 831 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +D +KI + + + + +L L + V+ EGVE PE+ + Sbjct: 832 LSYLKRLPFDQLKIDQSFVRDMAEDESSEAIVLAILSLSHALGLEVVAEGVEMPEQRDFL 891 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + + QG+ +P P+E + Sbjct: 892 RQHGCDSFQGYLFGKPLPMEAWGDFL 917 >UniRef50_Q2SPM3 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPM3_HAHCH Length = 826 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 101/268 (37%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M V +R+S +++++ + +QP T GR++ E L HP Sbjct: 559 MADAVSKRLSIENELRTAVKDKAL------MFYYQPQVSVTDGRIIGAEALIRWNHP--Q 610 Query: 60 SQRLPPDRYFTEITVSHRMEVVK-----EQIDLLAQKADFFI-EHGLLASVNIDGPTLIA 113 + PD + + S+ + + + + D E + +VN+ Sbjct: 611 RGLITPDEFVPVLENSNLILTAGLDMFTQACMQVKEWLDKGWWEEDMRVAVNVSPKQFYQ 670 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGM 164 +I+ +E + E+ E + + + S+ G LDDFGTG Sbjct: 671 PEFVEQIIEILEATRLPAYCIELEVTESVVIQNVKDTINKMLSLKGLGVRFSLDDFGTGY 730 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + D +KI R + + S +L + V+ EGVET E Sbjct: 731 SSLSYLKRLPVDSLKIDRSFVTDINSDVNDAAIVSTILAMAAHLDLEVVAEGVETVEHLE 790 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ + QG+ S+P P E + + Sbjct: 791 FLKENECDYYQGYLFSKPLPAEEMGELL 818 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 94/266 (35%), Gaps = 24/266 (9%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPS 60 Q+ +R++ +LQ + +QPI ++ AVE L HP Sbjct: 301 NAQLQERLALENELHGALQRNEIVV------YYQPIIDLQTQQITAVEALVRWQHPT--R 352 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ + + V++ + + SVN+ Sbjct: 353 GLVSPAKFIPIAEANGLIVEIGEWVLRTACLQNRAWQLAGLPP-IRMSVNLSARQFEESN 411 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 + I+ +L E+ E + + E G L LDDFGTG ++ Sbjct: 412 LVELVGEIIQESGLHPSYLELEVTESSLMADIQRSVTILKQLRELGVWLALDDFGTGYSS 471 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + +KI R + +P+ + + ++ L + EG+ET ++ + Sbjct: 472 LNYLKRFPVNMLKIDRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYL 531 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 Q QG++ PAP + + Sbjct: 532 QKRGCQEGQGYYFGIPAPANEITEIL 557 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + + A +L+ +F L +QP R++ E L THP Sbjct: 783 MQARSARTLQIDNALRRALERNQFSL------VYQPQLSLNTNRIVGFEALIRWTHP--Q 834 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 PPD + + ++ V+K + L D + + SVN+ Sbjct: 835 FGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGL-KDVTISVNLSAVQFRHP 893 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 R ++ +E L+ EL E + + + + + G + +DDFGTG + Sbjct: 894 RLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYS 953 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L +KI R L E + S ++ L + + EGVET E+ Sbjct: 954 SLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEF 1013 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ QG++LSRP + + + + Sbjct: 1014 LRSRGCTEIQGYYLSRPLQADAVFSFI 1040 >UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L613_MAGSM Length = 577 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 95/269 (35%), Gaps = 25/269 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +R +++++ L +QP G ++ E L HP Sbjct: 313 MTEAARERFELETHLRQAIEKNELVL------YYQPQVDLHDGTIIGAEALIRWKHP--E 364 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P ++ + + V++ I +A + + + +N+ Sbjct: 365 RGLISPAQFIPVAEETGLIVPIGEWVMRTAIRQIAIWKELGVTP-VRVGINLSALQFKRQ 423 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 + + + E+ E + + G L +DDFGTG + Sbjct: 424 NLAALVEELLNEHDIDPSLVDLEITESAIMDDVGRAIEMLKRISALGVKLSIDDFGTGYS 483 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + + +KI R L +S + + S ++ + + + VIVEG+ET + Sbjct: 484 SLSQLRQFPFQTLKIDRSFVTDL-ESSGDKAIVSAIIAMAHSLEQTVIVEGLETSAQLTI 542 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG+ S+P P E + Sbjct: 543 MKELNCNEMQGFLFSKPLPAEEFTALLRE 571 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 96/267 (35%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + +R++ +L+ L +QP + GRL+ E L P Sbjct: 627 MTQAARERLALEARLRRALELGHMRL------YYQPQIELATGRLVGAEALLRWLDP--E 678 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P R+ S + V+ E Q + L +VN+ + Sbjct: 679 EGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQQWRAAGLP-DLAIAVNVSLHQFLLT 737 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + L E+ E K + E G L +DDFGTG + Sbjct: 738 DIAGATAEALNKSGFPASLLELEITESALAEKPEEALAVLNRLRELGLRLAIDDFGTGYS 797 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + + S + T+ S ++ L + V+ EGVET E+ Sbjct: 798 SLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSVIALGHAMGLKVLAEGVETQEQLSF 857 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q QG+F SRP P E + Sbjct: 858 LQQKGCDYFQGYFCSRPLPAEDFTRLL 884 >UniRef50_Q0KC83 Predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains n=3 Tax=cellular organisms RepID=Q0KC83_RALEH Length = 1124 Score = 366 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 96/269 (35%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + +RI +L++ F L +QP G AVE L HP Sbjct: 848 MSASLQRRIDMESHLHRALEQDEFIL------YYQPRIALASGACTAVEALIRWRHP--E 899 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + S + ++E A + + SVN+ Sbjct: 900 LGLVMPGDFIPFAEQSGAIVEIGAWALREACRQNAAWRAQGLPP-VRVSVNLSARQFADK 958 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMA 165 + I+ + + L EL E + + + + G L +DDFGTG + Sbjct: 959 SLRLTIIDALRQAGLPGNLLELELTESMVMRDAEQASSWLSRLKRTGVRLAIDDFGTGYS 1018 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + LS D +KI + +S + S ++ L +R V+ EGVE + Sbjct: 1019 SLAYLSRFPIDTVKIDGSFVRYIPESRSDTQITSAVIGLGHRLGLEVVAEGVENEVQLEF 1078 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 ++ QG++ S P P + + + Sbjct: 1079 LRREGCDEVQGYYFSHPLPPAKITAFLAS 1107 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 366 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 96/268 (35%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +R+S +L+ +L +QP G ++ +E L HP Sbjct: 554 MNATSGERLSLESDLWHALKNDELFL------VYQPQIDLRDGTVIGMEALIRWQHPK-- 605 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++ Q + + ++N+ L Sbjct: 606 RGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNLQLQKEGLPP-IRVAINLSARQLSDR 664 Query: 115 RQQPKILRQIE----RLPWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + IE +L E+ E + + T + + G L LDDFGTG + Sbjct: 665 NFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFS 724 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + P + ++ L + VI EGVE E Sbjct: 725 SLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSF 784 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ + QG+F+SRP + L +L Sbjct: 785 LKKNGCDEGQGYFISRPLTFDDLRMFLL 812 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 366 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 22/262 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R+ +++++++F L +Q + G+ E L HP Sbjct: 706 MQETINMRVDLERELKKAIEQKQFEL------YYQVQMNSAGQPSGAEALIRWRHP--ER 757 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ + + V+ + L ++N+ + Sbjct: 758 GIISPIQFIPVAEETGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSAKQFLQPD 817 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMAN 166 ++ I L+ EL E + + T ++ E G LDDFGTG ++ Sbjct: 818 FANQVKNSIRSFHIDNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGYSS 877 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L + +KI + L +T+ ++ + + VI EGVET E+ + + Sbjct: 878 LQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQLL 937 Query: 227 QNSPAFAAQGWFLSRPAPIETL 248 QG++ S P I Sbjct: 938 NAHGCGNYQGYYFSEPLSINEF 959 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 366 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 84/266 (31%), Gaps = 24/266 (9%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGR-LMAVELLTVVTHPLNPS 60 + R++ + +L+ F L +Q + ++ E L Sbjct: 786 NANSVSRLTLENSLRRALERNEFSL------LYQAKLDLAEQNIIGAEALIRWH--SAEL 837 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V+++ + + VNI Sbjct: 838 GMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVA-GRPIRVGVNISARQFREDS 896 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMAN 166 I +E L E+ E + + G + +DDFGTG ++ Sbjct: 897 LYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSS 956 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 L D +KI R + Q + + ++ + + V+ EGVET + + Sbjct: 957 LGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFL 1016 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ SRP +E + Sbjct: 1017 RGQGCDQLQGYIFSRPLVVEDFVGLL 1042 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 366 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 93/267 (34%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + R+ +L+ F+L+ +QPI GRL+ E L + P Sbjct: 466 MNLKAHARMEMETNLRHALEREEFFLE------FQPIVNARDGRLVGAEALLRWSDP--E 517 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + PD + S + V++ + + + SVN+ G Sbjct: 518 KGLIMPDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPP-FRISVNVSGRQFCQA 576 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEF-GPLWLDDFGTGMA 165 + I +L E+ E + + E + +DDFG G + Sbjct: 577 NFTDTVCSIIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYS 636 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L + D IKI R L + + ++ + R V+ EGVET E+ Sbjct: 637 SLGYLQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDF 696 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG++ RP E T + Sbjct: 697 LKEQGCHEIQGFYFHRPLSEELFKTLL 723 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 97/269 (36%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 + ++R+ ++++E + + +QP +L A E L HP Sbjct: 694 LQACTLERLQLENQLRKAIEEGQLEV------FYQPKLNLADDQLNAAEALVRWRHP--Q 745 Query: 60 SQRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V+++ Q + + SVNI L Sbjct: 746 QGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQWQQQGL-AEIRVSVNISVYQLRQG 804 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + +E L EL E L TF + E G L +DDFGTG + Sbjct: 805 NLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTFRQLRELGVKLAIDDFGTGYS 864 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L Y+KI + L E + ++ + + V+ EGVET + Sbjct: 865 SLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKVVAEGVETQAQMDF 924 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +++ QG+ +SRP + A Sbjct: 925 LKSQNCDEIQGYLISRPVEAAAFAELLRA 953 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 93/263 (35%), Gaps = 24/263 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M + ++R++ A +L L +QP+ + G L+AVE L HP Sbjct: 594 MNARSLERLALETALHRALPRDELQL------YFQPVMKAEGGELVAVEALLRWRHP--D 645 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++ + + + L VNI Sbjct: 646 LGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAG-GAPLHMMVNISARQFREE 704 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFGP-LWLDDFGTGMA 165 + + L EL E + + + G L +DDFGTG + Sbjct: 705 GFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYS 764 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + ++ L S ++ L + V+ EGVET Sbjct: 765 SLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDV 824 Query: 226 VQNSPAFAAQGWFLSRPAPIETL 248 ++ AQG+ S P P E Sbjct: 825 LRRQGCDLAQGFHFSPPLPWEEF 847 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 93/268 (34%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + + +S +L F L +QP R+ VE L HP + Sbjct: 559 MNARGQELLSLETDLRRALDRGEFRLH------YQPQLDLRDNRIAGVEALLRWKHPRD- 611 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + + V++ + + + SVN+ Sbjct: 612 -GVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGV-APVRISVNVSARQFRED 669 Query: 115 RQQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMA 165 ++ + + L E+ E + A++ G L +DDFGTG + Sbjct: 670 TLLRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYS 729 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI + + + + L ++ V+ EGVET E+ Sbjct: 730 SLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAF 789 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ QG+ SRP P + L + Sbjct: 790 LRRRACDLIQGFHFSRPLPADALTPFLA 817 >UniRef50_A0YP68 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=2 Tax=Oscillatoriales RepID=A0YP68_9CYAN Length = 575 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 98/264 (37%), Gaps = 24/264 (9%) Query: 6 IQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLP 64 +I+ ++L+ +F L +QP G+++ E L + + Sbjct: 315 HDQIALENDLRQALEHNQFQL------YYQPKVDLKTGQIIGAEALIRWI--ESKRGFVS 366 Query: 65 PDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 P + + V++ +E L +VN+ G P Sbjct: 367 PAVFIPLAEEIGLIEPIGEWVLRTACRQTKTWHKLGLET-LKMAVNLSGCQFNLPDICPM 425 Query: 120 ILRQIER----LPWLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMANFSAL 170 +L + L EL E + + + G + +DDFGTG ++ S L Sbjct: 426 VLETLLAEDLPSSCLELELTESFLVEHEDASIQKLNRLKALGLKIAIDDFGTGYSSLSYL 485 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 + +D +K+ R + Q+P+ + + ++ + ++ V+ EGVET E ++ Sbjct: 486 QQFPFDVLKLDRCFVQNIDQNPKNKIIVEAVIKMAHQLNLEVVAEGVETTAELHVLRQYQ 545 Query: 231 AFAAQGWFLSRPAPIETLNTAVLA 254 QG+ SRP P + V + Sbjct: 546 CDIIQGYLFSRPIPAQEFQALVES 569 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 98/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + R+ ++L+ + LQ +QPI +++ E L HP + Sbjct: 605 MHTSALVRLQLETDLRQALERQELRLQ------YQPILCLNTDQIVGFEALVRWQHPRD- 657 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 + P + T + + V++E + F L+ SVN+ L Sbjct: 658 -GLIAPGHFITVAEETGLIVPIGEWVLQEACRQMQCWHTQFGQVLPLMVSVNLSSKQLSQ 716 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEF-GPLWLDDFGTGM 164 ++ R + L+ E+ E + L T + E L +DDFGTG Sbjct: 717 PDLLQQVDRMLAETGLRPQQLKLEITESMILDNTEVARQTLLKLKERQIQLSMDDFGTGY 776 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ + L + D +KI R + E R L ++ + + VI EG+ET + Sbjct: 777 SSLNYLHRLPIDLLKIDRSFIHEMDSGEESRELVRAIISIAHSLKMQVIAEGIETRSQLE 836 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ S P E + Sbjct: 837 QLHELGCEFGQGYLFSTPLDPEPAADFL 864 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 99/269 (36%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M R +R+ +L + + L +QP GR++ E L P Sbjct: 882 MTRIARERLHIEARLRRALADGQLLLH------YQPQVDLRSGRIIGAEALVRWQDP--E 933 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP R+ + + V+ E D + L +VN+ Sbjct: 934 QGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPA-LTVAVNVSPRQFHQA 992 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMA 165 ++++ + L EL E + +++ + G + +DDFGTG + Sbjct: 993 DLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYS 1052 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + ++L D +KI R + P+ + + ++ + + V+ EGVET E+ Sbjct: 1053 SLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAF 1112 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +Q QG+ SRP P + + Sbjct: 1113 LQQRNCDRYQGFLRSRPLPAQAFEQLLRE 1141 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++++ +++ + +QPI G L+ VE L HP Sbjct: 631 MHIHALKQLQLENDLRRAIERDELVV------YYQPIICLKNGTLIGVEALVRWQHP--Q 682 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIE-HGLLASVNIDGPTLIA 113 + P + + + V+ + + + + + SVN+ G Sbjct: 683 EGMISPAEFIPIAEETGLIIELDQWVLNTACQQMRFWQEKYSDFKSITLSVNLSGRQFSQ 742 Query: 114 LRQQPKILRQIERL----PWLRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGM 164 I + + +L+ E+ E + + + E + LDDFGTG Sbjct: 743 PDLIKNIDNILTQNKLEKQYLKLEITETVLIENPNSAAEMLEQLIERKVTVCLDDFGTGY 802 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ L D +KI R + + T+ ++ L VI EG+ET ++ Sbjct: 803 SSLGYLHRFPLDVLKIDRSFVSNIETNTSNSTIIRTIITLARELEIEVIAEGIETEQQRE 862 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q+ QG++ S P L + V Sbjct: 863 FLQSLGCHYGQGYWFSPPVDGRELISLV 890 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 98/268 (36%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M + R+ +++ + F + +QPI L E L HP Sbjct: 875 MHASAVSRLQLETDLRRAIERQEFLV------YYQPIISLQHDTLTGFEALIRWQHP--Q 926 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIE-HGLLASVNIDGPTLIA 113 +PP R+ + + ++++ L + L SVN+ L Sbjct: 927 QGLVPPARFIPIAEETGLIVPIGEWILEQAAQQLKIWQTQYRNYESLKMSVNLSSKQLRD 986 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEF-GPLWLDDFGTGM 164 I R + + L+ E+ E I + ++ E + LDDFGTG Sbjct: 987 ASLLGTIDRILSKTEIDNNALKVEITESILMENVQVAADVLIALRERNIEICLDDFGTGY 1046 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L + +KI R + +R + E + ++ L + +I EG+ET + Sbjct: 1047 SSLSYLHRFPVNTLKIDRSFVMRMRPNDENSEIVRAIVSLAHILGMEIIAEGIETELQLA 1106 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ QG+F ++P + + Sbjct: 1107 QLKWIGCEQGQGYFFAKPLATSEVEALL 1134 >UniRef50_B5VVW5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Arthrospira maxima CS-328 RepID=B5VVW5_SPIMA Length = 852 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 96/268 (35%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +Q++ E+++ + F L +QPI ++ E L P Sbjct: 586 MKSHALQQLQLEADLREAIKNQEFQL------YYQPIMNLKTNQIAGFEALVRWISP--Q 637 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQ-----IDLLAQK-ADFFIEHGLLASVNIDGPTLIA 113 + P + S + + E LA + + S+N+ Sbjct: 638 RGFVSPGEFIPVSEESGLIIPLGEWILLEGCRQLAIWNQKYCQNPPFMLSINLSTRQFSQ 697 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGM 164 + + + + + ++ E+ E + + G L +DDFGTG Sbjct: 698 VNLIECVDQILTQTGVDRSCIKLEITESAIMDDVDEAIALLERLKALGIKLSMDDFGTGY 757 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L D +K+ + + S + + ++ L + ++ EG+ET + Sbjct: 758 SSLSYLHRFPIDTLKVDQSFVRRMDDSQQNTEIVKTIIMLGHNLNMDIVAEGIETEGNVQ 817 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++N QG+F S+P P+ L + Sbjct: 818 TLKNLNCEYGQGYFFSKPLPVTALEDLL 845 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 24/266 (9%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNPS 60 Q +++ +++L F + +QP G+++ E L HP Sbjct: 389 NSQTYRQLILENQLVKALAREEFEVH------YQPQVDVISGQVVGAEALVRWRHP--EK 440 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 PP + + + V+++ + Q S+N+ Sbjct: 441 GLQPPANFIAIAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIP-RISINLSARQFRQSD 499 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 + I ++ EL E + + G L +DDFGTG ++ Sbjct: 500 LVEQCRNTIRSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSS 559 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L D +KI + + + + + ++ L V+ EGVET E+ + Sbjct: 560 LNNLKHFPIDTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFL 619 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+F SRP P E + Sbjct: 620 KRLGCEIVQGYFFSRPLPFEGFREYL 645 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 365 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 99/262 (37%), Gaps = 24/262 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M ++++ I+ +L L +QPI GR+ E L HP Sbjct: 551 MHQEILDAINLEADLRAALDRGELLLH------YQPIVDVQTGRIEGFEALVRWDHP--D 602 Query: 60 SQRLPPDRYFTEITVSHRMEVVK-----EQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 +PP ++ + ++ + E L + L SVN+ + Sbjct: 603 RGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVNVSCHQFVK 662 Query: 114 LRQQPKILRQIERLP----WLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGM 164 + +E L+ E+ E + + + + G + +DDFGTG Sbjct: 663 EGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHTAGELSRLKALGVKIAIDDFGTGY 722 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L ++ D++KI R + E + + ++ L VI EGVE ++ Sbjct: 723 SSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSIIALARSLGLTVIAEGVEHQDQLD 782 Query: 225 DVQNSPAFAAQGWFLSRPAPIE 246 ++N+ AQG+ SRP + Sbjct: 783 KLRNADCDKAQGFMFSRPVDKD 804 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 365 bits (938), Expect = e-100, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 93/268 (34%), Gaps = 24/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++R+ +L+ F L +QP G ++ E L P Sbjct: 573 MSTGGLERLKLEGDLRYALKRNEFVLH------YQPRVNINTGLIVGAEALIRWDLP--D 624 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 L P + S + V++ + D + H SVN+ Sbjct: 625 RGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHP-RVSVNLSTHQFKKD 683 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFGP-LWLDDFGTGMA 165 + R ++ L E+ E + T + E G + +DDFGTG + Sbjct: 684 NLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYS 743 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + L +KI + + + + + ++ L V+ EGVET E+ Sbjct: 744 SLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTV 803 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++N AQG+ S+P + + ++ Sbjct: 804 LRNYQCDEAQGYLFSQPVDADRMTEFLV 831 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 365 bits (938), Expect = e-99, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 89/262 (33%), Gaps = 18/262 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q+ R + +LQ F L +QP+Y R+ E L HP Sbjct: 444 MDEQLQARRALELDLRRALQAGEFEL------FYQPLYHLGDERVTGCEALLRWRHP--E 495 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + E + A + +VN+ Sbjct: 496 RGMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWPEHVRLAVNLSPAQFRDRGLVRT 555 Query: 120 ILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSAL 170 ++ + L E+ E + L + G + +DDFGTG ++ S L Sbjct: 556 VVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYL 615 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI + + + + +L L EGVET + ++ Sbjct: 616 RSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQG 675 Query: 231 AFAAQGWFLSRPAPIETLNTAV 252 QG+F+SRPAP + + Sbjct: 676 CAEIQGYFISRPAPASEIAKML 697 >UniRef50_C6X932 Diguanylate phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X932_METSD Length = 473 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 97/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R S +L + +F L +QP G + E L HP+ Sbjct: 197 MQTDISTRHSLYADMRAALAQGQFRLH------YQPQVDAVGNIFGAEALLRWQHPV--R 248 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 +PP + + + V+KE L + + L SVN+ L Sbjct: 249 GMIPPGVFIAAAEETGLIQPIGTWVLKEACAQLVKWSKDPNMAHLSISVNVSASQLRQPD 308 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST-FASMCEFGPL----WLDDFGTGMAN 166 +++ + R L+ EL E + T M LDDFGTG ++ Sbjct: 309 FVQEVIEIVMRSGATPAQLKLELTESMLAKDVDTTIQKMKALRAFGISWSLDDFGTGYSS 368 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L + ++ +KI + L + + + L+ L +I EGVET E+ + Sbjct: 369 LNYLKHLPFEQLKIDQSFVRDLLTNESDKAIVETLVVLSKNLNMMLIAEGVETTEQLNYL 428 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 N QG+ SRP IE + Sbjct: 429 LNKGCMKYQGYLFSRPLSIEAFEAFM 454 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 22/268 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R + ++L + L +QP T GR++ VE L HP Sbjct: 446 MQAAMDLRGALESDLHQALALDQLRLH------YQPQIDTAGRVIGVEALLRWWHP--QR 497 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P+ + + + +++ L+ L +VN+ Sbjct: 498 GLVSPNEFVPLAESTGLILPIGRWILETSCVLIKNWESDACTRSLQVAVNVSARQFRQAD 557 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPK-DSTFASMCEFGPL----WLDDFGTGMAN 166 ++ R ++ L+ EL E + L + T A M L LDDFGTG ++ Sbjct: 558 FVEQVKRSLKASGANPARLKLELTESVLLKNVEDTIAKMLAIKRLGVAFSLDDFGTGYSS 617 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L+++ D +KI + L + + T+ ++ + VI EGVE+ + + + Sbjct: 618 LSYLAQLPLDQLKIDQSFVRKLPGARKEETIARTIITMGRELDMNVIAEGVESEAQRQFL 677 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLA 254 + A QG+ SRP P+E L + Sbjct: 678 EAHGCHAFQGYLFSRPLPVEHLTVFLQE 705 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 96/265 (36%), Gaps = 23/265 (8%) Query: 2 IRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPS 60 + + ++L+ F L +QP Y R+ VE L + Sbjct: 554 NTLSTKNLKLESLLYKALERDEFLLH------YQPQYDAKTNRISGVEALIRWDN--EEL 605 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ D + ++ SVN+ Sbjct: 606 GMISPADFIPLAEETGLIVPIGEWVMRTACHQNKAWQDEGLPP-MVMSVNLSIRQFYQPD 664 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPKDS---TFASMCEFG-PLWLDDFGTGMANF 167 I + +E L E+ E + + DS + + G + +DDFGTG ++ Sbjct: 665 LPQVIGKILEESGMAPELLELEITESMAMHADSAISILKQLKQLGVRIAIDDFGTGFSSL 724 Query: 168 SALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ 227 + L + D++KI R + E + + ++ L + V+ EGVE + + ++ Sbjct: 725 NHLKKFPLDHLKIDRSFVDDICLGSEEQDIVKTIIMLAHNLNLRVVAEGVENDLQQQFLK 784 Query: 228 NSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ S+P + + + Sbjct: 785 DHRCDVFQGFHFSKPVIRDAIPELL 809 >UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V122_9PROT Length = 995 Score = 364 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 97/266 (36%), Gaps = 22/266 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M V +R S ++ +++ L + + R + E L HP Sbjct: 733 MQHSVSERASLEADLHRAVPDQQLQLYYQIQ------VDSNQRSLGAEALLRWIHPT--R 784 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ S + V+ LA ++ + L +VN+ G Sbjct: 785 GMVSPAQFIPLAEESILILELGDWVLDAACRQLAIWSEADLMRHLTLAVNVSGKQFKQRD 844 Query: 116 QQPKILRQIE----RLPWLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMAN 166 K+ R ++ L+ EL E + L S ++ L +DDFGTG ++ Sbjct: 845 FVEKVARILQVHQVDASRLKLELTESVVLNDVTDVISKMQALKALRVRLSMDDFGTGYSS 904 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L ++ D IKI + + + ++ + + VI EGVET + + Sbjct: 905 LSYLKQLPLDQIKIDQSFVRDMTFDQNDAVMVQTIIDMAKNFGLNVIAEGVETEAQKLLL 964 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAV 252 + QG+ S+P PI + Sbjct: 965 EQLGCLNYQGYLFSKPLPIAQFEALL 990 >UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAJ7_CHRVI Length = 1030 Score = 364 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 95/266 (35%), Gaps = 24/266 (9%) Query: 4 QVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQR 62 ++ +R+ ++L L +QP + GR++ +E L HP Sbjct: 755 EISERLEFENDLRDALDRGELEL------FYQPQVEVGSGRIVGLEALLRWRHP--GKGM 806 Query: 63 LPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQ 117 + P + + + V++ + + +VN+ G + L Sbjct: 807 VSPTVFVPILEELGLIELVGEWVLRTACRQHRVWRERGLSPP-RIAVNVSGRQFLRLGFA 865 Query: 118 PKILRQIERLP----WLRFELVEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMANFS 168 + R + + E+ E + T + G + LDDFGTG ++ S Sbjct: 866 ETVERILTEEGTAVTAVELEITETVLAHDTDVCIETLRRLKRLGLEIALDDFGTGYSSMS 925 Query: 169 ALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQN 228 L D +KI R + E + + +L L + EGVETP + ++ Sbjct: 926 YLKRFPVDTLKIDRAFVAECDVNAEDAAICTAILSLARGLGLKTLAEGVETPGQLEFLRR 985 Query: 229 SPAFAAQGWFLSRPAPIETLNTAVLA 254 QG+F RP P+E + + Sbjct: 986 EGCQFYQGFFFRRPMPVEEVERLLAE 1011 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 364 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 98/269 (36%), Gaps = 24/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTC-GRLMAVELLTVVTHPLNP 59 M Q ++ ++ +++ + F + +QPI +++ E L HP Sbjct: 332 MHTQALKLLNLETDLRRAIENQEFLV------YYQPIMALEKTKIVGFEALIRWQHPK-- 383 Query: 60 SQRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADF-FIEHGLLASVNIDGPTLIA 113 + P + + + V+KE L + L SVN+ L Sbjct: 384 KGFISPGEFIPIAEETGLIIPIGQIVLKEACQQLKTWQEKLPKAKNLTISVNLSSQQLKE 443 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGM 164 I + L+ E+ E + + + E + LDDFGTG Sbjct: 444 PEILQHIDHSLNVTGLQPESLKLEITESLLMENADVATTLLRQLKERKIQISLDDFGTGY 503 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L D +KI R + + E T+ ++ L + V+ EG+ET ++ Sbjct: 504 SSLSYLHRFPVDTLKIDRSFVNCIGKPEENLTIIQSIMALAHNLDMDVVAEGIETEKQLT 563 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ QG+F S+P P + L Sbjct: 564 FLKFLECEFGQGYFFSKPLPSHEVENQFL 592 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 364 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 97/269 (36%), Gaps = 26/269 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ + +L F L +QP G ++ +E L HP Sbjct: 615 MN--AKEQFILENSLRHALDRDEFILH------YQPKVNICTGEIVGLEALVRWEHP--E 664 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++ + L ++N+ Sbjct: 665 MGLVSPATFIPIAEETGLIVELGEWVLRTACQQAVLWHKLGL-APLSVAINLSARQFYQP 723 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + IE L E+ E I + ++ G + +DDFGTG + Sbjct: 724 NLVEIVAQVIESTGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYS 783 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L ++ ++ +KI + L+ + + + + ++ L V+ EGV+ E+ Sbjct: 784 SLNYLKQLPFNTLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLEL 843 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAVLA 254 +++ QG+ SRP +++ + A Sbjct: 844 LRSLNCEIVQGYLFSRPLSVDSTTDILQA 872 >UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V294_9PROT Length = 1157 Score = 364 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 88/276 (31%), Gaps = 40/276 (14%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + R S +L F L +Q + G + E+L HP Sbjct: 888 MQDAISARASLEADLRVALINSEFQLH------YQIQVNSLGAALGAEVLIRWMHP--QR 939 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P ++ S + V+K L D + L +VN+ Sbjct: 940 GMVSPAQFIPLAEESGLILPVGEWVLKTACHQLKVWQDNALTRELTLAVNVSSKQFRQAE 999 Query: 116 QQPKILRQIERLPW-----------------LRFELVEHIRLPKDSTFASMCEFG-PLWL 157 + + ++ + E+ + + G + Sbjct: 1000 FVELVKKTLQSSGANPSLLKLELTESLLLENID-EI--------IAKMNELKLMGIHFSI 1050 Query: 158 DDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGV 217 DDFGTG ++ + + D +KI + + + ++ + + VI EGV Sbjct: 1051 DDFGTGYSSLQYIKRLPLDQLKIDQSFVRDIMDDNNDAAIVQTIIAMSDALGLNVIAEGV 1110 Query: 218 ETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ET E+ + + QG+ S+P P+E + Sbjct: 1111 ETREQRAFLDSHGCHTFQGYLFSKPIPLEQFEILLA 1146 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 364 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 99/267 (37%), Gaps = 25/267 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M + ++ + +++ + +QP+ + GRL+ E L ++P+ Sbjct: 656 MNARALEHMRMESQLRHAIERNEMKVH------YQPLVDSGTGRLVGAEALLRWSNPV-- 707 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P+++ + + V++ A +H + +VNI G Sbjct: 708 LGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQR--PDHEIFVAVNISGKQFQKR 765 Query: 115 RQQPKILRQIERLP----WLRFELVEHIRLPKD----STFASMCEFGP-LWLDDFGTGMA 165 + + L EL E + L S + G +DDFGTG + Sbjct: 766 TLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFS 825 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L +D +KI R L + L ++ + N V+ EGVET + Sbjct: 826 SISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREF 885 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ S AQGW SRP P + + Sbjct: 886 LRLSGCHIAQGWLYSRPIPGKDFQELI 912 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 364 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 93/267 (34%), Gaps = 22/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 + R V R +L E RF + +QP GR++ ELL H Sbjct: 672 LHRAVEARFELENELRHALDEDRF------SVVYQPQVDAEGRVIGAELLLRWEH--AQR 723 Query: 61 QRLPPDRYFTEITVSHRME-----VVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + + + V++ L L SVNI Sbjct: 724 GAISPAEFIPVAEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRDLTLSVNISARQFRDPH 783 Query: 116 QQPKILRQIERLP----WLRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGMAN 166 P + ++ L+ EL E + L + T + G LDDFGTG ++ Sbjct: 784 FVPHLREILQETGAPGDRLKLELTESMLLEEIDTVVAHIDELRALGVEFALDDFGTGYSS 843 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 + L ++ +KI + + P + +++L VI EGVET E+ + Sbjct: 844 LAYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLDLDVIAEGVETVEQRAFL 903 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVL 253 QG+ P + L AVL Sbjct: 904 FGLGCRHFQGFLYGYPGDLADLERAVL 930 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 364 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 89/263 (33%), Gaps = 18/263 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQ-TCGRLMAVELLTVVTHPLNP 59 M RQ +R + + +F L +QP+ R+ E L HP Sbjct: 570 MDRQAQKRRDMEIDLRYAFAKGQFEL------YYQPLVDVARDRVAGFEALLRWRHP--E 621 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + E + A + +VN+ + Sbjct: 622 RGMISPADFIPVAEDIGLIVGLGEWVLRQACAEAATWPSEIKIAVNLSPVQFRSRNLVQA 681 Query: 120 ILRQIERLPW----LRFELVEHIRLP----KDSTFASMCEFG-PLWLDDFGTGMANFSAL 170 ++ + + L E+ E + L +T M + G + +DDFGTG ++ S L Sbjct: 682 VIGALAQSGLSPRRLELEITESVFLAETEANLATLHQMRDLGVRISMDDFGTGYSSLSYL 741 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 +D IKI R L Q P+ + + L EGVET + ++ Sbjct: 742 RSFPFDKIKIDRSFVQDLAQRPDCLAIVRAIAGLGRSLNITTTAEGVETQAQLDWLREEG 801 Query: 231 AFAAQGWFLSRPAPIETLNTAVL 253 QG+ S P + + Sbjct: 802 CNEVQGFLFSPARPAGEIAALIA 824 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 364 bits (937), Expect = 1e-99, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 30/250 (12%) Query: 9 ISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNPSQRLPPDR 67 + + ++L +++F L +QP GR++ +E L HP + PDR Sbjct: 312 LELETSLRQALGQKQFRL------YYQPQIDIVSGRVLGLEALLRWHHPT--QGMIAPDR 363 Query: 68 YFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILR 122 + + + V++E +A + GL +VN+ I R Sbjct: 364 FIPLAEKTGLIIPIGEWVLREACSQVATQH------GLKVAVNLSARQFHQKDLVAMIRR 417 Query: 123 QIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMANFSALSEV 173 ++ L E+ E + T + + G + LDDFGTG ++ S L Sbjct: 418 ILDETGMPPVNLELEITESALIYDVELAIATMEQLNDLGVSVSLDDFGTGYSSLSYLKRF 477 Query: 174 RYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFA 233 D +KI + + P+ + ++ + + VI EGVET + ++ Sbjct: 478 PIDMLKIDKSFIDEVTTDPDSNVIVKTIIVMAHSLGLKVIAEGVETK-QLTMLREHGCDQ 536 Query: 234 AQGWFLSRPA 243 AQG+ ++RP Sbjct: 537 AQGYLIARPL 546 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 92/263 (34%), Gaps = 24/263 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M +R+ +L E + L +QP G+++ VE L HPL Sbjct: 388 MNAAANKRLHLESELWCALAENQLVL------YYQPQIDLLSGKVVGVEALVRWRHPL-- 439 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 +PP + + V+ + D I+ G +VNI Sbjct: 440 RGLIPPAEFIPVAEECGLILPLGHWVLLTACRQAREWLDAGIDMG-EMAVNISAHQFRQP 498 Query: 115 RQQPKILRQIERLPW----LRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 + + L E+ E + + T A + G L +DDFGTG + Sbjct: 499 EFISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGYS 558 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + P+ +L + ++ L ++ EGVE + Sbjct: 559 SLAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAEF 618 Query: 226 VQNSPAFAAQGWFLSRPAPIETL 248 ++ QG+ +P E + Sbjct: 619 LRTLECERVQGFHFYQPVCAEEV 641 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 102/267 (38%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M Q + ++ ++LQ++ F+L +QP+ G + E L HP Sbjct: 708 MNEQTLLKLELESYLRKALQKKEFFL------CYQPLTNLETGAIYGSEALIRWNHPK-- 759 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + V++ + + + L SVN+ Sbjct: 760 LGLVSPGDFIPLAEETGLINEIGHWVLQTACRQTKEWHNKGLG-SLTVSVNVSVHQFQQP 818 Query: 115 RQQPKILRQIERL----PWLRFELVEHIRLPKDS----TFASMCEFG-PLWLDDFGTGMA 165 K+L+ ++ +L EL E L + G + +DDFGTG + Sbjct: 819 GFVHKVLQVLKETMLEPQFLVLELTESSMLRNMENSILVIQELQRNGIRVAIDDFGTGYS 878 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + S L + D +KI R LR + + ++ + V+ EGVET E+ R Sbjct: 879 SLSYLKHLPIDALKIDRSFIDNLRSGSPDIAIVNAIITMGLGLHVKVVAEGVETAEQMRL 938 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 +++ AQG+F+ RP E + Sbjct: 939 LKDLKCHFAQGFFIHRPLGAEQFEEEL 965 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 85/267 (31%), Gaps = 24/267 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M V + + +L L +QP G++ E L HP+ Sbjct: 795 MNIVVHEAMEMETDLRRALDRGELLLH------YQPKIDLDSGKITGAEALVRWQHPV-- 846 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQ-----IDLLAQKADFFIEHGLLASVNIDGPTLIAL 114 + P + + + + E + + + N+ Sbjct: 847 RGMIAPGMFIPLAEETGLILPIGEWVLENICLQIKSWQTQGFPL-VPIAANLSARQFRND 905 Query: 115 RQQPKILRQIERLPWLRFEL----VEHIRLPK----DSTFASMCEFG-PLWLDDFGTGMA 165 I R ++ L E + + T + G L LDDFGTG + Sbjct: 906 ELIATIQRILQDTGLPPHLLELELTESMIMRNVQTAAETMQELNALGVSLALDDFGTGYS 965 Query: 166 NFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRD 225 + + L D +KI R + P + + ++ + + + EGVET E+ Sbjct: 966 SLNYLRRFPVDCLKIDRSFISDVADDPSAAAVATSIIAIAHSLGLQAVAEGVETEEQLEF 1025 Query: 226 VQNSPAFAAQGWFLSRPAPIETLNTAV 252 ++ + QG+ S P +E + Sbjct: 1026 LRQCACDSYQGYLYSAPLAVEEFTAML 1052 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 98/269 (36%), Gaps = 25/269 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M ++V++ I+ +++ L +QPI+ G +L E L HP Sbjct: 992 MRQEVLEVINMENELRRAIEGNSLELH------YQPIFDVDGGKLEGFEALVRWRHP--E 1043 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEH--GLLASVNIDGPTLI 112 + PDR+ S + VV L D GL SVN+ Sbjct: 1044 HGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLTMSVNLSCKQFA 1103 Query: 113 ALRQQPKILRQIER----LPWLRFELVEHIRLPKD----STFASMCEFGPL-WLDDFGTG 163 ILR + P L+ E+ E + + E G L +DDFGTG Sbjct: 1104 QHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLKEIGVLLAVDDFGTG 1163 Query: 164 MANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEW 223 ++ S L + D +KI R E + ++ + + V EGVET E+ Sbjct: 1164 YSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRVTAEGVETQEQL 1223 Query: 224 RDVQNSPAFAAQGWFLSRPAPIETLNTAV 252 +Q+ AQG+ S+P + Sbjct: 1224 ERLQSINCDRAQGYMFSKPMAPGDAGDMI 1252 >UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488U0_COLP3 Length = 788 Score = 364 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 92/269 (34%), Gaps = 22/269 (8%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS 60 M + + + +++ L +Q + E+L HP+ Sbjct: 519 MQIALEENAAMLAELHQAIDNGELEL------FYQIQIDETKGIQGAEVLLRWFHPI--R 570 Query: 61 QRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALR 115 + P + S + V++ L + SVN+ Sbjct: 571 GMVSPLDFIPMAEESGLIIPIGRWVLESACHQLKVWENIPNRENWQISVNVSALQFQQEN 630 Query: 116 QQPKILRQIER----LPWLRFELVEHIRLPK----DSTFASMCEFGP-LWLDDFGTGMAN 166 + I L+ EL E + L + + G +DDFGTG ++ Sbjct: 631 FVEIVQEIILSNNINPHGLKLELTESMVLDNVDIIIEKMHQLNQLGIDFSMDDFGTGYSS 690 Query: 167 FSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDV 226 S L + +KI + + P+ + +++L N VI EGVET E+ + + Sbjct: 691 LSCLKRLPLKQLKIDQSFVRDITTDPDDAAIVQTIINLSNSLKYDVIAEGVETQEQRQFL 750 Query: 227 QNSPAFAAQGWFLSRPAPIETLNTAVLAL 255 N+ QG+ SRP PI V ++ Sbjct: 751 FNNGCSQYQGYLFSRPVPIAEFEELVSSM 779 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 364 bits (935), Expect = 2e-99, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 97/269 (36%), Gaps = 25/269 (9%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT-CGRLMAVELLTVVTHPLNP 59 M ++ +++ + F L +QPI+ ++ E L HPL Sbjct: 471 MHSNASAQLQLEVDLRRAIERQEFQLH------YQPIFHLETAAIVGFEALLRWHHPL-- 522 Query: 60 SQRLPPDRYFTEITVSHRM-----EVVKEQIDLLAQKA-DFFIEHGLLASVNIDGPTLIA 113 + P + + + V++E L++ F +E L SVN Sbjct: 523 RGLISPVEFIPVAEETGLILPISWWVLQEACRQLSRWQTQFPLEVPLFVSVNFSSKQFSE 582 Query: 114 LRQQPKILRQIERLPW----LRFELVEHIRLPKDST----FASMCEFG-PLWLDDFGTGM 164 + P+I + L+ E+ E + + G L +DDFGTG Sbjct: 583 VGLIPQIEDILHTTGLAPQSLKLEITESAIMENAEATAAKLLEIKALGIQLGIDDFGTGY 642 Query: 165 ANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWR 224 ++ S L D +K+ R + S E + + L + EGVET E+ Sbjct: 643 SSLSYLHRFPVDILKVDRSFVSAM-DSHENLQIVHTITMLSQNLGMRAVAEGVETAEQAA 701 Query: 225 DVQNSPAFAAQGWFLSRPAPIETLNTAVL 253 ++ AQG+F S+P ++ + Sbjct: 702 QLRAMNCQYAQGYFFSKPIDASSMEHLLA 730 >UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=B1M4V3_METRJ Length = 777 Score = 364 bits (935), Expect = 2e-99, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 91/261 (34%), Gaps = 18/261 (6%) Query: 1 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCG-RLMAVELLTVVTHPLNP 59 M ++ R + +L F L +QPI R+ E L HP+ Sbjct: 511 MDERIEARRALTADLRGALDRDEFVL------YFQPIVAAKECRVRGFEALIRWKHPV-- 562 Query: 60 SQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPK 119 + P + + + + E I A + + +VN+ Sbjct: 563 RGFVSPGEFIPLAEETGVIIPLGEWILREACRIAAGWPGDVRIAVNLSPRQFRHSDLTQL 622 Query: 120 ILRQIERLPW----LRFELVEHIRLPKD----STFASMCEFG-PLWLDDFGTGMANFSAL 170 + + L E+ E + L +T + + E G L LDDFGTG ++ S L Sbjct: 623 VRSALRTSGLAAARLELEVTESVFLEATPAINATLSKLREMGVRLSLDDFGTGYSSLSYL 682 Query: 171 SEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSP 230 + +D IKI + L Q + S ++ + + EGVET + + Sbjct: 683 RRIAFDKIKIDQSFVRDLPQERGAAAIVSAIIDMATSLDMTITAEGVETDAQRACLLEQG 742 Query: 231 AFAAQGWFLSRPAPIETLNTA 251 QG+ S+P P E Sbjct: 743 CHEFQGYLFSKPLPAEQAAAL 763 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.216 0.907 Lambda K H 0.267 0.0660 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,195,361,874 Number of Sequences: 3077464 Number of extensions: 137647415 Number of successful extensions: 436538 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 10391 Number of HSP's successfully gapped in prelim test: 1529 Number of HSP's that attempted gapping in prelim test: 387342 Number of HSP's gapped (non-prelim): 13736 length of query: 255 length of database: 1,040,396,356 effective HSP length: 126 effective length of query: 129 effective length of database: 652,635,892 effective search space: 84190030068 effective search space used: 84190030068 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.5 bits) S2: 93 (39.7 bits)